BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62] (273 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62] gi|254040268|gb|ACT57064.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62] Length = 273 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI Sbjct: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF Sbjct: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL Sbjct: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA Sbjct: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK Sbjct: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 >gi|315121784|ref|YP_004062273.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495186|gb|ADR51785.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 271 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/271 (69%), Positives = 229/271 (84%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M SVYLS+QSFIKV GKSA FLQ IITAD+ +LP+ +ARGSA+LTPQGKIL YFLISKI Sbjct: 1 MPSVYLSSQSFIKVRGKSASTFLQGIITADITSLPFDVARGSALLTPQGKILFYFLISKI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 EED F+LEI++ +RDS I+KLLFYKLRS+V +E+QPING+ LSWNQE ++ SFIDERF Sbjct: 61 EEDVFVLEINKLQRDSFIEKLLFYKLRSDVALEVQPINGITLSWNQEQAPTSPSFIDERF 120 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 SIA +LLHRTWG+NE+ SD K YHELRIN+GIV+P DF PSTIFPHDALMDL+ GIS Sbjct: 121 SIAGILLHRTWGYNEESTSDPKEYHELRINYGIVEPIPDFPPSTIFPHDALMDLVKGISF 180 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TKGCY+GQEVVSR+QHRNI+RKRP+IITG + LP +GS + D+ +IGTLG++VG+KALA Sbjct: 181 TKGCYVGQEVVSRMQHRNIVRKRPIIITGYNALPANGSSLFVDNTKIGTLGIIVGEKALA 240 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IARIDKV +AI+K MALT G++V + P W Sbjct: 241 IARIDKVSNAIEKNMALTADGIKVTITLPPW 271 >gi|222085402|ref|YP_002543932.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium radiobacter K84] gi|221722850|gb|ACM26006.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium radiobacter K84] Length = 279 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 6/271 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++SF++V G A PFL +IT D+++L AR A+LTPQGKIL F+IS+ Sbjct: 1 MPAVFLRDRSFLRVTGAEAEPFLHNLITTDLVSLGTDEARPGALLTPQGKILFDFMISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + F+LE D ++RD L+ +L Y+LR+ V + GV ++W D RF Sbjct: 60 DGPGFLLETDTAQRDGLLKRLTMYRLRAPVDFAVGETEGVTVAWGDNVAEGPR---DSRF 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L RT GH+ A + Y LRI +GI DF FPHD L+DL G+ Sbjct: 117 AKAGIALTRTSGHHGDDAEAL--YEALRIANGIAVSGQDFALQDAFPHDVLLDLNGGLGF 174 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR+ R+R +I+ G+ DLP SG+ + IGTLG + G LA Sbjct: 175 RKGCYVGQEVVSRMQHRSTARRRVVIVIGSADLPASGTELTAGGKPIGTLGSIEGANGLA 234 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ AI G + G V + P W Sbjct: 235 IVRIDRAGEAIAAGTPILAAGHEVSVALPVW 265 >gi|86357042|ref|YP_468934.1| putative aminomethyltransferase protein (glycine cleavage) [Rhizobium etli CFN 42] gi|86281144|gb|ABC90207.1| putative aminomethyltransferase protein (glycine cleavage) [Rhizobium etli CFN 42] Length = 281 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 4/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F++ + Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIVSLAPDEARPGALLTPQGKILFDFMVWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D ++LE D +RD+L+ +L Y+LR+ V + QP NG+ + W ++ + D RF Sbjct: 60 DGDGYLLETDAGQRDALLKRLTMYRLRAAVTLTTQPENGITVCWGEDADRIGGAR-DSRF 118 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A V L R G + + A + Y LRI HGIV +DF FPHD LMDL G+S Sbjct: 119 AKAGVPLRRRAGRHGEDAPSL--YDSLRIRHGIVTSGSDFSLQDAFPHDVLMDLNGGLSF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +G LG V G LA Sbjct: 177 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPQAGTEITAAGKPVGALGSVEGGSGLA 236 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ +G L V + P W Sbjct: 237 IVRIDRAGAAMAEGTPLLAGQTPVSLALPPW 267 >gi|325292432|ref|YP_004278296.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium sp. H13-3] gi|325060285|gb|ADY63976.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium sp. H13-3] Length = 282 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 5/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+++ I+V G A FL +ITADV LP AR SA+LTPQGKIL FLI++ Sbjct: 1 MPSAFLADRRLIRVSGTGAEEFLNNLITADVENLPQGEARASALLTPQGKILFDFLIARD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++E +++D+L+ +L YKLR+ V ++ +PI GV + W++ + + D RF Sbjct: 61 GPD-YLIESGAAEQDALLRRLTMYKLRAPVDLKAEPIEGVSVFWSE--SVPEAGAKDGRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L R G + + DI Y LRI HGI + D+ FPHD LMD+ +G+S Sbjct: 118 AKAGINLFRVPGAS--ASGDITAYDALRIEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQEVVSR++HR R+R + ++ LP +G+ I + +G LG V G LA Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSAESALPATGTEITVNGKPVGALGTVCGNTGLA 235 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I R D+V A+ L V V + P W Sbjct: 236 IVRTDRVADALASATPLIAENVPVTVALPAW 266 >gi|190891087|ref|YP_001977629.1| aminomethyltransferase (glycine cleavage) protein [Rhizobium etli CIAT 652] gi|190696366|gb|ACE90451.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli CIAT 652] Length = 290 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLAADEARPGALLTPQGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ + F D RF Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGISVCWGEDTDGVSLGFRDSRF 127 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L R G + A + Y LRI HGI +DF FPHD LMDL G+S Sbjct: 128 TKAGLTLTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFSLQDAFPHDVLMDLNGGLSF 185 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G LA Sbjct: 186 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVDGGSGLA 245 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ +G L G V + P W Sbjct: 246 IVRIDRAGAAMAEGTPLLAGGTAVSLTLPQW 276 >gi|241203903|ref|YP_002974999.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857793|gb|ACS55460.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 284 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/273 (40%), Positives = 150/273 (54%), Gaps = 5/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLFVSGAEAQSFLQNLITTDITALGPDEARPGALLTPQGKILFDFMIWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118 + D +++E D +RD L+ +L YKLR+ V + GV +SW++ E + D Sbjct: 60 DGDGYMIETDAGQRDGLLKRLTMYKLRAAVTLSPSTEEGVTVSWDEGAEGVRESQGARDS 119 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF+ A V L R G + A + Y LRI+HGIV +DF FPHD LMD G+ Sbjct: 120 RFAKAGVTLTRRAGRHGDGAEVL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFNGGL 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVEGGNG 237 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ A+ G L V P W Sbjct: 238 LAIVRIDRAGAAMAAGTPLLAGDTPVSLVLPAW 270 >gi|15888395|ref|NP_354076.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium tumefaciens str. C58] gi|15156077|gb|AAK86861.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium tumefaciens str. C58] Length = 282 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 156/271 (57%), Gaps = 5/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MSS +L+++ I+V G A FL +ITAD+ LP R SA+LTPQGKIL FLI + Sbjct: 1 MSSAFLADRRLIRVSGTGAEEFLNNLITADIENLPEGETRASALLTPQGKILFDFLIWRD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++E +++D+L+ +L YKLR+ V ++ + + G+ + W ++ + + D RF Sbjct: 61 GRD-YLVETGAAEQDALLRRLTMYKLRAPVELKAETVEGIGVFWG--NSVTEAGVRDGRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A V L R + + Y LR+ HGI + D+ FPHD LMD+ +G+S Sbjct: 118 AKAGVDLRRV--PGASASGEAAAYEALRVEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQEVVSR++HR R+R + ++ LP SG+ I + +G LG V G +ALA Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSADGTLPASGTEITANGKPVGALGTVYGNRALA 235 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I R D+V A+ G L V V + P W Sbjct: 236 IVRTDRVADALAAGTPLLADNVAVSVALPAW 266 >gi|209548616|ref|YP_002280533.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534372|gb|ACI54307.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 284 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 110/273 (40%), Positives = 149/273 (54%), Gaps = 5/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118 + D + +E D +RD L+ +L YKLR+ V + + +GV +SW + E + D Sbjct: 60 DGDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDS 119 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF+ A V L R G + + Y LRI HGIV DF FPHD LMD G+ Sbjct: 120 RFAKAGVTLIRQPGKHGD--GEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGL 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHG 237 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ AI G L V P W Sbjct: 238 LAIVRIDRAGAAIAAGTPLLAGETPVSLVLPQW 270 >gi|163760578|ref|ZP_02167659.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea phototrophica DFL-43] gi|162282193|gb|EDQ32483.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea phototrophica DFL-43] Length = 272 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/261 (40%), Positives = 148/261 (56%), Gaps = 5/261 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A FLQ +ITA+V TL + +A+LTPQGKIL FLIS+ E F L+ID Sbjct: 1 MHVDGAEAEHFLQNLITANVETLKSGCVQAAALLTPQGKILFDFLISRAPEGGFHLDIDG 60 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIADVLLHRT 130 D + +L YKLR+NV + Q V+ W+Q +++ ID RF A V R Sbjct: 61 KLTDGFMKRLTLYKLRANVSFDRQADTPVIAGWDQPR--PDAALIDNRFPETAGVW--RL 116 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 +G N + + + LRI +G+ + +D+ S FPHD LMD +G+ KGCY+GQEV Sbjct: 117 YGSNANLGAGQADWDSLRIAYGVAESGSDYALSDAFPHDILMDKNHGVDFRKGCYVGQEV 176 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250 VSR+ HR R+R + ++G LPPSG+ I +G LG V G +ALAI RID+V A Sbjct: 177 VSRMHHRGTARRRVVTVSGEATLPPSGTSIQAGTKPVGELGTVSGDRALAIVRIDRVADA 236 Query: 251 IKKGMALTVHGVRVKASFPHW 271 + LT G+ V + P W Sbjct: 237 MAAEHQLTADGIAVTLTLPDW 257 >gi|116251291|ref|YP_767129.1| aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115255939|emb|CAK07020.1| putative aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 287 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/276 (38%), Positives = 147/276 (53%), Gaps = 8/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G FLQ +IT D+ L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLFVSGAETQSFLQNLITTDIAALGADEARPGALLTPQGKILFDFVIWR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-----SF 115 + + +++E D +RD L+ +L YKLR+ V + GV + W ++ S Sbjct: 60 DGEGYMIETDAGQRDGLLKRLTMYKLRAAVTLAPSTEEGVTVCWGEDADGSQGVRGSQGA 119 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D RF+ A + L R G + + Y LRI+HGIV +DF FPHD LMD Sbjct: 120 RDSRFAKAGITLIRRPGKHGDGKEAL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFN 177 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 G+S KGCY+GQEVVSR+QHR R+R + ++ DLP +G+ I +GTLG V G Sbjct: 178 GGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATDLPGTGTEITAAGKPVGTLGSVDG 237 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ A+ G L V P W Sbjct: 238 GNGLAIVRIDRAGAAMAAGTPLLAGNTPVSLVLPAW 273 >gi|114707124|ref|ZP_01440022.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506] gi|114537320|gb|EAU40446.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506] Length = 284 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 160/274 (58%), Gaps = 10/274 (3%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ +++ G A FLQ ++TA+ TLP +AR SA+LTPQGKIL FL+SK Sbjct: 1 MPYAQLEDRAVLRLSGSDAGTFLQNLVTAETATLPKGVARPSALLTPQGKILFDFLVSKT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSSFIDER 119 E D + +E + RD+L +L YKLR+ V++E P + V + W T S + DER Sbjct: 61 E-DGYRIECAAAIRDALAKRLTLYKLRAKVLVE--PADEPVFALWEAGETPSGA-VRDER 116 Query: 120 FSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 F V +R +G + A+D T+ LR+ G+ + TDF + +FPHD L+D G Sbjct: 117 FGGGPV--YRLYGEPTDAGEAADAATFRTLRLRSGVAEAETDFPQADMFPHDVLLDQNGG 174 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +S KGCY+GQEVVSR+QHR R+R M+ +G L G+ + + + +IGTL + Sbjct: 175 VSFKKGCYVGQEVVSRMQHRGTARRRLMLASGERHL-TEGANVTSGEAKIGTLLAASERF 233 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +A+ R DK+ +K G AL + GV ++ + P W Sbjct: 234 GIAVVRTDKLASILKSGAALAIDGVPIELTIPSW 267 >gi|218661628|ref|ZP_03517558.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli IE4771] Length = 278 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 147/265 (55%), Gaps = 11/265 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLASDEARPGALLTPQGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------EHTFSN 112 + D +++E D +RD L+ +L YKLR+ V + + GV + W + E + Sbjct: 68 DGDGYMIETDAGQRDGLMKRLTMYKLRAAVTLALVAEEGVSVCWGEDEDGIRDAESVRDS 127 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 D RF+ A + L R G + A + Y LRI HGI +DF FPHD L+ Sbjct: 128 RGVRDSRFAKAGIALTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFALQDAFPHDVLL 185 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG Sbjct: 186 DLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGTGTEITAAGKPVGTLGS 245 Query: 233 VVGKKALAIARIDKVDHAIKKGMAL 257 V G LAI RID+ A+ +G L Sbjct: 246 VAGGSGLAIVRIDRAGAAMAEGTPL 270 >gi|307300928|ref|ZP_07580697.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] gi|307321831|ref|ZP_07601217.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] gi|306892500|gb|EFN23300.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] gi|306903883|gb|EFN34469.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] Length = 282 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 108/271 (39%), Positives = 147/271 (54%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ Sbjct: 1 MPMVCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF Sbjct: 60 DGEALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A V + R + + I LRI GI D+ FPHD LMDL G+S Sbjct: 118 EKAGVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI K A+ VR+ + P W Sbjct: 238 IVRIDKAGEAIAKSEAILAGDVRLTLTLPAW 268 >gi|15964857|ref|NP_385210.1| hypothetical protein SMc02558 [Sinorhizobium meliloti 1021] gi|15074036|emb|CAC45683.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021] Length = 280 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/268 (39%), Positives = 146/268 (54%), Gaps = 3/268 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ + + Sbjct: 2 VCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR-DGE 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF A Sbjct: 61 ALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRFEKA 118 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 V + R + + I LRI GI D+ FPHD LMDL G+S KG Sbjct: 119 GVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSFRKG 178 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 CY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LAI R Sbjct: 179 CYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLAIVR 238 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 IDK AI K A+ VR+ + P W Sbjct: 239 IDKAGEAIAKSEAILAGDVRLTLTLPAW 266 >gi|13476462|ref|NP_108032.1| hypothetical protein mll7789 [Mesorhizobium loti MAFF303099] gi|14027223|dbj|BAB54177.1| mll7789 [Mesorhizobium loti MAFF303099] Length = 286 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/276 (38%), Positives = 148/276 (53%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ TL + A+LTPQGKIL FLIS+ Sbjct: 1 MPFALLKDRALISVSGPDAEHFLQNILTTDLDTLGAGETKPGALLTPQGKILFDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---NSSFID 117 E+ F LE D + +L+ YKLR+ V I + V ++W +E S +++F D Sbjct: 61 GENAFRLECRADISDDFVRRLMLYKLRAKVEIAKSEQSLVAVAWGKESIASENDSTAFAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +RF+ V RT+ A DI + RI HG+ + D+ FPHD L+D G Sbjct: 121 KRFAKESVT--RTYAGIAD-AGDIAAWQAFRIAHGMAESGADYALGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEVVSR+QHR R+R +I+ LP G+ + + +GTLG G Sbjct: 178 VGFKKGCYVGQEVVSRMQHRGTARRRVLIVQAGLALPAPGTELTVEGRPVGTLGSSAGDI 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V V+ + P W K Sbjct: 238 GLAIARIDRVKVALDAGQPILAGDVPVRLAIPAWAK 273 >gi|222148091|ref|YP_002549048.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] gi|221735079|gb|ACM36042.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] Length = 279 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L N++F+KV G A FL ++TAD+ + A SA+LTPQGKIL L+ + Sbjct: 1 MPAVFLENRAFLKVAGAEAAHFLNNLLTADLGLIEPGQAAPSALLTPQGKILFDMLVYPL 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D ++LE+ ++++L+ +L YKLR+ V + +GV + W+ T +F D RF Sbjct: 61 A-DGYLLEVASDEQEALLRRLTLYKLRAAVTLTPAEFSGVTVIWDNVPT---GAFQDRRF 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + R G DI+ Y LRI G+ + D+ +PHD L+DL G+S Sbjct: 117 AAAGETVWRVPGRVNSAGDDIRLYTALRIKAGVAEAGLDYPLQDAYPHDVLLDLNGGVSF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+ HR + R+R I++ LP +G+ + D +GTLG V+ LA Sbjct: 177 KKGCYVGQEVVSRMHHRKMARRRIAIVSADTALPATGTELRADGKPLGTLGTVLDTIGLA 236 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ G + V+ P W Sbjct: 237 ILRIDRTGDAMANGTPILAGDQAVRLHLPAW 267 >gi|227821430|ref|YP_002825400.1| putative aminomethyltransferase protein [Sinorhizobium fredii NGR234] gi|227340429|gb|ACP24647.1| putative aminomethyltransferase protein [Sinorhizobium fredii NGR234] Length = 282 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ I V GK A LQ ++T D+ L R A+LTPQGKIL FLIS+ Sbjct: 1 MPKLRLDDRVTISVSGKDADALLQGLVTTDIGALADDEVRPGALLTPQGKILFDFLISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE R + ++L+ +L YKLRS V + + VV+++ +E SS+ D RF Sbjct: 60 DGEALRLETSRDQAEALLKRLTMYKLRSAVELSLLAPAPVVVAFGEER--PESSYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A + + R + + Y LRI G+ D+ FPHD LMDL G+S Sbjct: 118 EKAGIPVFRLYREIAGAGAGAADYDRLRIEAGVATAGRDYALQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +I++G LPP+G+ + IG+LG V + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRVVIVSGQALLPPTGTSLSIHGRPIGSLGTVQDRAGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI KG + V V + P W Sbjct: 238 IVRIDKAGEAIAKGDPILAGDVPVTLTLPGW 268 >gi|150395930|ref|YP_001326397.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] gi|150027445|gb|ABR59562.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] Length = 282 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 144/271 (53%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M V L ++ I V GK A LQ +IT D+ L R A+LTPQGKIL FL+S+ Sbjct: 1 MPKVCLDGRAIIHVSGKDADTLLQTLITTDIAQLGADEIRPGALLTPQGKILFDFLLSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE + ++L+ +L YKLRS V I +Q V + + ++ S+ D RF Sbjct: 60 DGEALRLETTGDQGEALVKRLTMYKLRSAVEISLQSPAPVTVVFGEDA--PAGSYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A V + R + + I + LRI GI D+ FPHD LMDL G+S Sbjct: 118 EKAGVSVFRLYRDLPSAEAGIADFDALRIAAGIAVAGRDYALQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +II G LPP+G+ I + IG+LG + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIIAGEAALPPTGTSISVNGRTIGSLGTARDRNGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI KG + V V + P W Sbjct: 238 IVRIDKAGEAIAKGDTILAGDVPVSLTLPAW 268 >gi|110633313|ref|YP_673521.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium sp. BNC1] gi|110284297|gb|ABG62356.1| glycine cleavage T protein (aminomethyl transferase) [Chelativorans sp. BNC1] Length = 288 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 4/276 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M SV LS+++ + G A LQ IIT D+ L AR A+LTPQGKIL FLIS+ Sbjct: 1 MPSVELSDRTVLLAAGPDAEALLQNIITTDLSALGQDEARPGALLTPQGKILFDFLISRT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 +D F L+ + +L+ Y+LR+ + I + +SW + S + S +D Sbjct: 61 GQDGFRLDCRSDLAQDFLKRLMLYRLRAKAELSIDNNAVISVSWGNDSLSSQTDSMSVVD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF A + + R +G ++ ++DI + LR+ HG+ + D+ FPH+ L D G Sbjct: 121 RRFPEA-LKVARRYGSADEGSADISAWDRLRVEHGVAESGRDYDLGDAFPHEILFDQNGG 179 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + L KGCY+GQEVVSR+ HR R+R +I+ G LP SGS I D IG LG V Sbjct: 180 VGLKKGCYVGQEVVSRMHHRGTARRRLVIVRGDKALPASGSQITADGRAIGALGTVCDAD 239 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAI RID+ AI+ G + + P + K Sbjct: 240 GLAILRIDRAAEAIQAGNPILAGEAALSLKVPAFAK 275 >gi|319784488|ref|YP_004143964.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170376|gb|ADV13914.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 286 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 104/276 (37%), Positives = 142/276 (51%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+ Sbjct: 1 MPCAQLKDRALISVSGPDAEHFLQNILTTDLDILAPGEAKPGALLTPQGKILFDFLISRT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 E+ F LE D + +L YKLR+ V I V ++W E T S S + D Sbjct: 61 GENAFRLECRADISDDFVRRLTLYKLRAKVEITKSDQAFVTVAWGHESTPSQSDSTAAAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF V R++G ++ D+ + RI GI + +D+ FPHD L+D G Sbjct: 121 TRFPKGAVT--RSYGETDE-PGDLAAWQAFRIVGGIAESGSDYQLGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 I KGCY+GQEVVSR+QHR R+R +I + LP G+ + +GTLG V Sbjct: 178 IGFKKGCYVGQEVVSRMQHRGTARRRVLIASADRPLPAPGTELTVAGRPVGTLGSTVDTT 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V + + P W K Sbjct: 238 GLAIARIDRVKAALDAGQPIMAGDVPLTLAIPGWAK 273 >gi|254471836|ref|ZP_05085237.1| glycine cleavage T protein [Pseudovibrio sp. JE062] gi|211959038|gb|EEA94237.1| glycine cleavage T protein [Pseudovibrio sp. JE062] Length = 280 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 10/270 (3%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 L+++ +KV G A FLQ +++ DV L + A+LTPQGKIL +F+ + D Sbjct: 8 LTSRRLVKVFGDDAKEFLQNLVSCDVSELSATSSAFGALLTPQGKILWDFFVFADESTDG 67 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING---VVLSWNQEHTFSNSSFIDERFS 121 F++++ + D+ +L FYKLR+ V +E P + VV W + + D R + Sbjct: 68 FLIDVSADELDAFAKRLAFYKLRAKVTVE--PADEAVHVVAEWGDD--LPSDKPQDPRLA 123 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 L + G E+ AS+ YH RI GI DF + +FPHD MD LNG++ + Sbjct: 124 EMG-LRYIVTGEVEETASEAD-YHAHRIGLGIPQSGQDFQLADVFPHDTDMDSLNGVAFS 181 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGC+IGQEVVSR++HR RKR + ++ DLP +GS IL + +G+LG G LA+ Sbjct: 182 KGCFIGQEVVSRMKHRGTARKRVIKVSADSDLPATGSDILAGEKSVGSLGSSAGGAGLAM 241 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 R+D+ A+ G+ L GV + S W Sbjct: 242 LRLDRAKAAMDAGVPLMCEGVTLSPSIQAW 271 >gi|239831501|ref|ZP_04679830.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301] gi|239823768|gb|EEQ95336.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301] Length = 329 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 5/269 (1%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+ Sbjct: 49 TVNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDDLKPGALLIPQGKILFDFLVSRID- 107 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERF 120 ++ S I ++ Y+LR+ I QP + V +SW + S I D RF Sbjct: 108 GGLRFDLPASVAADFIKRITLYRLRAKAEITQQPESLVSVSWQGDSPPSQDDSIKRDSRF 167 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A++ + R +G + +D + +LR HGI + TDF + +FPHD D G+S Sbjct: 168 P-AELNVRRIYGRADGT-TDQSAWTKLRAEHGIAEGETDFAYNDVFPHDVNFDQTGGVSF 225 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC+IGQEVVSR+QHR R+R ++ LPP G+PI D EIGT+G +A Sbjct: 226 PKGCFIGQEVVSRMQHRGTARRRVLVARSEVPLPPMGTPITVDGREIGTMGSSADMVGIA 285 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFP 269 + RID+V A+ G + V + P Sbjct: 286 LVRIDRVKDAMDAGSTVLAGETPVTLTLP 314 >gi|49474072|ref|YP_032114.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse] gi|49239576|emb|CAF25933.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse] Length = 288 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 10/272 (3%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISK 59 +++ + IKV G+ A FLQ++IT DV + P +I G A+L+PQGK+L FLI K Sbjct: 5 QNAICFKKRKVIKVTGEEATDFLQSLITTDVTKIAPQEIFPG-ALLSPQGKVLADFLIGK 63 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFI 116 ++D ++++I S D+L +LLFYKLR V I QP +V +SWN E N SSFI Sbjct: 64 RDDD-YLIDIVSSLADTLYKRLLFYKLRKKVEIS-QPFQELVTISWNNESNNFNFDSSFI 121 Query: 117 DERFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D+RF + ++ RT+G A D K ++ LRI + I + D+ IFPHD D + Sbjct: 122 DKRFPQKEKIV-RTYGEIPFSAPDYNKNWNRLRIRYAIAESGQDYEIGKIFPHDINYDQI 180 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 +G+S KGCYIGQE+VSR+ HR+ R+R +I+ +L S S + +G LG Sbjct: 181 SGLSFNKGCYIGQEIVSRMHHRHTARRRVLIVKSQHEL-TSESTVEAGTKVLGHLGTCAA 239 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +ALA+ RID V A+ + TV V S Sbjct: 240 NEALALMRIDHVKDAMNNNITFTVENTPVTIS 271 >gi|240141126|ref|YP_002965606.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens AM1] gi|240011103|gb|ACS42329.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens AM1] Length = 284 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 141/275 (51%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGSDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|328544948|ref|YP_004305057.1| aminomethyltransferase protein (glycine cleavage) [polymorphum gilvum SL003B-26A1] gi|326414689|gb|ADZ71752.1| Putative aminomethyltransferase protein (Glycine cleavage) [Polymorphum gilvum SL003B-26A1] Length = 295 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 17/281 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+++ ++V G A FLQ +IT D+ A A+LTPQGKIL FLI K + + + Sbjct: 9 LASRGVVEVGGPEAHHFLQNLITCDMDKAAETGAGYGALLTPQGKILFDFLILK-DGERY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSN--SSFIDERFSI 122 +L+ R+ L+ +L+FY+LR+ V I + + V W + S S+ D R Sbjct: 68 LLDTPRAAVADLVKRLVFYRLRARVEIADRSEDLAVAALWGTDEAPSGAGSAVRDPRLP- 126 Query: 123 ADVLLHRTWGHNEKIASDIKT----------YHELRINHGIVDPNTDFLPSTIFPHDALM 172 VL R G E +A + + RI G+ + DF FPHDA M Sbjct: 127 --VLGFRLVGPREGLARTLAAAGAEDAGEAGWQAHRIRLGVPEAGADFALGDAFPHDADM 184 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 D L+G+S KGCY+GQEVVSR++HR+ R+R + ++G LP +G+PI D +GTLG Sbjct: 185 DQLSGVSFRKGCYVGQEVVSRMEHRSTARRRVVKVSGQQPLPEAGTPITADGRPVGTLGS 244 Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 G LA+ R+DKV A+ G++L V + + P W + Sbjct: 245 STGGDGLALVRLDKVKAALDNGVSLECGAVPLAVALPEWAR 285 >gi|218532559|ref|YP_002423375.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4] gi|218524862|gb|ACK85447.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4] Length = 284 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 141/275 (51%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|304392057|ref|ZP_07373999.1| glycine cleavage T protein [Ahrensia sp. R2A130] gi|303296286|gb|EFL90644.1| glycine cleavage T protein [Ahrensia sp. R2A130] Length = 283 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/275 (35%), Positives = 147/275 (53%), Gaps = 15/275 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + +N++ G+ A FL+ ++T + P A+LTPQGKIL F I+ I Sbjct: 13 MSQILHTNRATFSCTGEDATHFLENLVTCLISGKPAF----GALLTPQGKILFDFFITPI 68 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDER 119 + + + +RD LI +L FYKLR+ V ++ P+ VV SW + T + +F D R Sbjct: 69 D-GGYRFDCAAEQRDELIKRLGFYKLRAKV--DLAPLEEAVVTSWG-DATRPDDAFDDPR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN--- 176 S L R + + +D + RI G+ + D P ++FPHD MD + Sbjct: 125 LS---ALGWRAYRMQAEAKADDDAWLAHRIALGVPELGVDAEPGSVFPHDMSMDQFSKGS 181 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 G++ KGCY+GQEVVSR+QHR R R + + +DLP SG+ ++ D IGTLG V G+ Sbjct: 182 GVAFDKGCYVGQEVVSRMQHRGTARSRFVNVAAVNDLPESGAELMVGDRTIGTLGSVSGQ 241 Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LA+ R+D+ AI +G +T G V + P W Sbjct: 242 HGLALVRLDRAAKAITEGAPITADGTEVMLTLPDW 276 >gi|260462304|ref|ZP_05810512.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075] gi|259031798|gb|EEW33066.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075] Length = 286 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/276 (36%), Positives = 139/276 (50%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+ Sbjct: 1 MPFTLLKDRALISVSGPDAEHFLQNILTTDLDVLGESEAKPGALLTPQGKILFDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---TFSNSSFID 117 E+ LE D + +L+ YKLR+ V I V ++W +E +++ D Sbjct: 61 GENALRLECRADISDDFVRRLMLYKLRAKVEIAKPEQALVSVAWGKESIALQSDSTAVAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF V R++ A D + RI HGI + D+ FPHD L+D G Sbjct: 121 RRFGGESVT--RSY-AGAAQADDGAAWQTFRIAHGIAESGADYALGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEVVSR+QHR R+R +I+ LP +G+ + + +G LG G Sbjct: 178 VGFRKGCYVGQEVVSRMQHRGTARRRVLIVQSELPLPVAGTELTVEGRPVGALGSSAGTT 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V V P W K Sbjct: 238 GLAIARIDRVKAALDAGRPILAGDVPVTLIIPTWAK 273 >gi|163853701|ref|YP_001641744.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1] gi|163665306|gb|ABY32673.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1] Length = 284 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 140/275 (50%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W T + + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWEGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|121602749|ref|YP_988794.1| aminomethyltransferase [Bartonella bacilliformis KC583] gi|120614926|gb|ABM45527.1| aminomethyltransferase [Bartonella bacilliformis KC583] Length = 286 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 154/270 (57%), Gaps = 8/270 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKI 60 +++ L N+ I V G+ A FLQ +IT DV + P ++ G A+L+PQGK++ FLI KI Sbjct: 6 NAISLKNRKIINVIGEEATHFLQMLITTDVTKIGPQELFPG-ALLSPQGKVIADFLIGKI 64 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDE 118 ++ ++++I S D+ +LL YKL + + +Q I + L + SFID+ Sbjct: 65 DQG-YMIDIAESLADTFQKRLLLYKLHKKIEVTQPLQTITTIFLENEINTSKFTLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIA-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ RT+G +A D +H +RI + I + D+ T+FPHD D + G Sbjct: 124 RFPENEKII-RTYGETPFLAPKDNDNWHRMRIRYAITESGQDYEIGTVFPHDINYDQIGG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +S KGCY+GQEVVSR+ HR I R+R +I+TG L P GS I + +G LG + + Sbjct: 183 LSFNKGCYVGQEVVSRMHHRKIARRRFLIVTGQHYLTP-GSTIEASNKTLGKLGTCIANE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 ALA+ RID V A+ K TV+ + V S Sbjct: 242 ALALMRIDHVKDAMDKDSQFTVNNLPVTIS 271 >gi|312113562|ref|YP_004011158.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100] gi|311218691|gb|ADP70059.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100] Length = 290 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 144/277 (51%), Gaps = 7/277 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S L +++ +KV G + FL +IT DV L AR S +L+PQGKIL F + + Sbjct: 1 MPSTLLPDRAVLKVTGDDHVSFLHGLITNDVEHLGNDEARFSGLLSPQGKILFDFFVVR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTF-----SNSS 114 DT ++ +++ D+L+ +L YKLR+ V + ++ W ++ + Sbjct: 60 HGDTHFIDAPKAQADALLKRLTMYKLRAKVDVADVSDKTAAGAIWGEDAAAWAKANGGLA 119 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + D R + + + + + Y RI + + D+ S FPH+A D Sbjct: 120 YADPRLPELGSRILISAAAAPAVTATPEDYAAHRIALAVPEGGADYAFSDAFPHEACFDF 179 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 L+G+ KGC++GQEVVSR+QHR R R + +T + DLP G+ I+ +G LG V Sbjct: 180 LHGMDFKKGCFVGQEVVSRMQHRGTARTRVLSVTASADLPEGGADIVAGGFPVGRLGSVY 239 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G +A+ARID+V A+ KG+ALTV V + PHW Sbjct: 240 GAHGVALARIDRVRDALAKGLALTVGAADVDLTVPHW 276 >gi|188584007|ref|YP_001927452.1| folate-binding protein YgfZ [Methylobacterium populi BJ001] gi|179347505|gb|ACB82917.1| folate-binding protein YgfZ [Methylobacterium populi BJ001] Length = 285 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 136/253 (53%), Gaps = 3/253 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLLSRD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 + F L++ + L+ +L Y+LR+ V + P GV +W+ T +++ + D R Sbjct: 61 GGNGFRLDVAAERVPDLVKRLGLYRLRAKVTVAADPTLGVAAAWDGSETAADTVRVRDGR 120 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ + G A++ + YH RI G+ + DF S FPH+ALMD L G+ Sbjct: 121 LPALGERLYFSQGAFSADATE-EDYHAHRIGLGVPEGGRDFALSDAFPHEALMDQLGGVD 179 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + I D P+ G+ + +GT G G + Sbjct: 180 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPAPGTEVTAGARSLGTTGSAAGHRG 239 Query: 239 LAIARIDKVDHAI 251 LA R+D++ A+ Sbjct: 240 LATIRLDRLGDAL 252 >gi|90420870|ref|ZP_01228775.1| putative aminomethyltransferase [Aurantimonas manganoxydans SI85-9A1] gi|90334845|gb|EAS48617.1| putative aminomethyltransferase [Aurantimonas manganoxydans SI85-9A1] Length = 288 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 7/273 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +S + V G++A FLQ ++TAD+ +L R A+LTPQG+IL FLI K Sbjct: 1 MPYARLPERSLLAVTGEAAHHFLQNLVTADLDSLADGEMRPCALLTPQGRILFEFLIGK- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++ S L +L Y+LR+ + IE + V+ W + + + D RF Sbjct: 60 QADGLRIDVAASAAADLKKRLTLYRLRTKIGIESSDLP-VLAVWEEPDLTAAELYADRRF 118 Query: 121 SIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + + R +G E I + Y RI GI + TD+ S +FPHD L D G+ Sbjct: 119 PEGE--MARLYGAPPAELIEASPDDYRLRRIRGGIAEAETDYPGSDVFPHDVLFDQNGGV 176 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC++GQEVVSR+QHR R+R M++ G L P GS I IGT+ G + Sbjct: 177 SFRKGCFVGQEVVSRMQHRGTARRRLMLLAGERHLTP-GSNIEAGGKTIGTVLSADGTEG 235 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 RID++ A+ +G L+ GV V A+ P W Sbjct: 236 FGFLRIDRLAGALSRGEELSADGVPVTATIPPW 268 >gi|92119419|ref|YP_579148.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] gi|91802313|gb|ABE64688.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] Length = 293 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + R A+LTPQGKI FLI++ Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEA 60 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115 + F+++ S SL KL FYKLR+ V ++ I GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPDLTF 120 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164 D R +D L R E++A+ T Y RI G+ TDF+ Sbjct: 121 ADPR---SDRLGWRILAP-EELATRAATVIGAELVESADYDAHRIAAGVPSGGTDFMFGD 176 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + D P +G+ I+ D Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVLLDDGAPDAGTAIVAAD 236 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +GT+G + LA+ R+D+ AI+ G+ALT G+ ++ + P K Sbjct: 237 KSVGTMGSSAASQGLALLRLDRAADAIEAGIALTAGGIPIRVADPDDLK 285 >gi|118589212|ref|ZP_01546618.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia aggregata IAM 12614] gi|118437912|gb|EAV44547.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia aggregata IAM 12614] Length = 308 Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 146/290 (50%), Gaps = 20/290 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S LS++S I+V G A FLQ ++TAD+ + A A+LTPQGKIL FLI ++ Sbjct: 8 LSYAPLSDRSLIRVGGADAQHFLQNLVTADIDGMKDGGASAGALLTPQGKILFDFLIYRL 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDER 119 E ++L+ + L+ +L FY+LR+ V +E+ P N GV+ W+ D Sbjct: 68 ES-GYLLDAPSATAADLVKRLTFYRLRAKVDLELLPENVGVIALWDDNPEAGKGLDSDVD 126 Query: 120 FSIADVLLHRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTI 165 +++ V R ++IA D+ Y RI+ G+ + D+ S I Sbjct: 127 GALSAVTDPRLPALGKRIAGPVVELALKLLATAQDLAAYDRHRISMGVPEGLKDYDYSDI 186 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 FPHDA +D L G+S +KGCY+GQEVVSR+ HR RKR + I +D LP G+ I Sbjct: 187 FPHDADLDQLGGVSFSKGCYVGQEVVSRMHHRGSARKRFVQIESSDALPEKGTDITAGGK 246 Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IG LG G LA+ R+DKV A G L + P W Sbjct: 247 SIGALGSSALTDDGAVGLALLRLDKVAQAKDNGTPLQCGDAEILVKLPDW 296 >gi|153009949|ref|YP_001371164.1| glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC 49188] gi|151561837|gb|ABS15335.1| Glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 5/268 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+ Sbjct: 8 VNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDNLKPGALLAPQGKILFDFLVSRID-G 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-HTFSNSSFI-DERFS 121 ++ S I ++ Y+LR+ I P + V +SW E H N S D RF Sbjct: 67 GLRFDLPASIAADFIKRITLYRLRAKAEITQLPESLVSVSWQTESHPSQNDSIKRDSRFP 126 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 ++ +HR +G + +D + +LR +GI + TDF + +FPHD D G+S Sbjct: 127 T-ELNVHRIYGPADGT-TDESAWTKLRAEYGIAEGETDFAYNDVFPHDVNFDQTGGVSFP 184 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGC+IGQEVVSR+QHR R+R ++ +LPP G+ I D EIGT G +A+ Sbjct: 185 KGCFIGQEVVSRMQHRGTARRRVLVAHSDGNLPPMGTSITVDGREIGTTGSSADTIGIAL 244 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFP 269 RID+ AI G + + + P Sbjct: 245 VRIDRAKDAIDAGSPILAGETPITLTLP 272 >gi|254501842|ref|ZP_05113993.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222437913|gb|EEE44592.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 296 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 151/279 (54%), Gaps = 12/279 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ I+V G A FLQ ++TAD+ L + SA+LTPQGKIL FLI K + + Sbjct: 9 LHDRALIRVSGPDAEHFLQNLVTADIDELADPGSTLSALLTPQGKILFDFLIYK-QNSGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSS---FIDERFS 121 +++ + L+ +L FY+LR+ V +E + V + W + + +N + ID R + Sbjct: 68 LIDAPKETSADLLKRLTFYRLRAKVDLEAAGEDVCVFALWGGDLSDTNGAELVVIDPRLA 127 Query: 122 IADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + G + A+ D++ Y R+ G+ + DF S IFPHDA MD L G+ Sbjct: 128 ALGQRVVGPTGFADASAATVKDLEAYDAHRVALGVPEGLKDFAYSDIFPHDADMDQLGGV 187 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG--VVVGK 236 S KGCY+GQEVVSR+ HR RKR + I LP G+ ++ +D +G LG ++ Sbjct: 188 SFKKGCYVGQEVVSRVHHRGTARKRFIQIEAAGALPEKGTSVIANDKSVGELGSSTMIDG 247 Query: 237 KALAIA--RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +A +A R+DKV AI+ G+ LT V + P W + Sbjct: 248 QAFGVALLRLDKVHQAIENGVPLTCGDVAITVKLPDWAE 286 >gi|307941575|ref|ZP_07656930.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4] gi|307775183|gb|EFO34389.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4] Length = 298 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 100/286 (34%), Positives = 151/286 (52%), Gaps = 22/286 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L+ +S ++V G+ FLQ +ITAD+ + + A+LTPQGKIL FLI + Sbjct: 7 AHLTERSVVRVSGEDVHHFLQNLITADMDKIDAAGSGFGALLTPQGKILFDFLIFA-QNG 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN--SSFIDERF 120 T++L+ I +L FY+LR+ V IE I + V W + + ++D R Sbjct: 66 TYLLDTPSQTGADFIKRLTFYRLRAKVAIEDISETHSVFAVWGEAKIDCEPAACWLDPRV 125 Query: 121 SIADVLLHRTWGHNEKIASDIKT----------YHELRINHGIVDPNTDFLPSTIFPHDA 170 + VL R +G + I + +++ Y RI+ G+ + TDF S+IFPHDA Sbjct: 126 A---VLGQRLYGKADDIKASLESAGATEAGHTAYAAHRISLGVPESLTDFDYSSIFPHDA 182 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 MD LNG+S +KGCY+GQEVVSR+ HR RKR + +T + LP +G+ I++ DI +G L Sbjct: 183 DMDALNGVSFSKGCYVGQEVVSRVHHRGTARKRFIQVTSDNALPDAGTDIVSGDISVGQL 242 Query: 231 GVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 K +A+ R+DKV + GV V + P W Sbjct: 243 TSSTQLEDGTSKGIALTRLDKVVANRSDETPFSCGGVAVDLAIPDW 288 >gi|256113206|ref|ZP_05454074.1| aminomethyltransferase [Brucella melitensis bv. 3 str. Ether] gi|265994614|ref|ZP_06107171.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether] gi|262765727|gb|EEZ11516.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether] Length = 287 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S TKGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 182 SFTKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|306842068|ref|ZP_07474740.1| folate-binding protein YgfZ [Brucella sp. BO2] gi|306287818|gb|EFM59241.1| folate-binding protein YgfZ [Brucella sp. BO2] Length = 287 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGDEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G + Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVDGREIGAMGSSANQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|306845268|ref|ZP_07477844.1| folate-binding protein YgfZ [Brucella sp. BO1] gi|306274427|gb|EFM56234.1| folate-binding protein YgfZ [Brucella sp. BO1] Length = 329 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 49 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 107 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 108 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQSDSPASDNDSIKRDS 165 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 166 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 223 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G Sbjct: 224 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDAPLPPMGTPITVDGREIGAMGSSANHIG 283 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 284 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 314 >gi|306837527|ref|ZP_07470402.1| folate-binding protein YgfZ [Brucella sp. NF 2653] gi|306407419|gb|EFM63623.1| folate-binding protein YgfZ [Brucella sp. NF 2653] Length = 286 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 6 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 64 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 65 GGLRFDLPADAAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 122 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 123 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 180 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G Sbjct: 181 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIG 240 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 241 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 271 >gi|254718807|ref|ZP_05180618.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] gi|265983789|ref|ZP_06096524.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] gi|264662381|gb|EEZ32642.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] Length = 287 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADAAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|225627165|ref|ZP_03785203.1| folate-binding protein YgfZ [Brucella ceti str. Cudo] gi|261315117|ref|ZP_05954314.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] gi|225618000|gb|EEH15044.1| folate-binding protein YgfZ [Brucella ceti str. Cudo] gi|261304143|gb|EEY07640.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] Length = 316 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 36 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 94 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 95 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 152 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 153 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 210 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 211 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 270 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 271 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 301 >gi|189023880|ref|YP_001934648.1| glycine cleavage T protein (aminomethyl transferase) [Brucella abortus S19] gi|189019452|gb|ACD72174.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella abortus S19] Length = 286 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 6 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 64 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 65 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 122 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 123 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 180 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 181 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 240 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 241 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 271 >gi|90425803|ref|YP_534173.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB18] gi|90107817|gb|ABD89854.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB18] Length = 293 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/277 (34%), Positives = 143/277 (51%), Gaps = 12/277 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+N+ +K+ G+ A FL ++T D+ L R A+LTPQGKI+ F ++++ Sbjct: 1 MKSAFLANRGVVKISGEDARHFLNGLVTTDMTKLTPSQGRFGALLTPQGKIVADFFVTEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115 ++ F+L+ R L DKL FYKLR+ V++E + GV+ W+ E T + F Sbjct: 61 PAADDGGFLLDCPRELAQPLADKLKFYKLRAKVLVENLSDRLGVLAIWDGELTTLPEACF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + L ++T D Y RI+ G DF FPH Sbjct: 121 ADPRDPKLGWRCLLPVELANKTAEWIGAPLVDAVLYDARRISCGAPAGGVDFRYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCY+GQEVVSR+QHR R R + + P GS +L D +G Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMQHRGTARTRTVRLGFDGAQPEPGSELLAADKPVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 LG + LA+ RID++ A++ AL+ GV V+ Sbjct: 241 HLGSLADGVGLALVRIDRLAEAVEAASALSAGGVAVR 277 >gi|23501554|ref|NP_697681.1| aminomethyltransferase [Brucella suis 1330] gi|62289627|ref|YP_221420.1| aminomethyltransferase [Brucella abortus bv. 1 str. 9-941] gi|82699555|ref|YP_414129.1| glycine cleavage T protein (aminomethyl transferase) [Brucella melitensis biovar Abortus 2308] gi|148560194|ref|YP_001258651.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840] gi|161618637|ref|YP_001592524.1| glycine cleavage T-protein barrel [Brucella canis ATCC 23365] gi|254688942|ref|ZP_05152196.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|254693424|ref|ZP_05155252.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|254697077|ref|ZP_05158905.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|254701454|ref|ZP_05163282.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|254704000|ref|ZP_05165828.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|254707626|ref|ZP_05169454.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] gi|254709792|ref|ZP_05171603.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|254713794|ref|ZP_05175605.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|254717149|ref|ZP_05178960.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|254729973|ref|ZP_05188551.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|256031282|ref|ZP_05444896.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M292/94/1] gi|256060794|ref|ZP_05450956.1| glycine cleavage T-protein barrel [Brucella neotomae 5K33] gi|256257190|ref|ZP_05462726.1| glycine cleavage T-protein barrel [Brucella abortus bv. 9 str. C68] gi|256369104|ref|YP_003106612.1| aminomethyltransferase, putative [Brucella microti CCM 4915] gi|260168420|ref|ZP_05755231.1| aminomethyltransferase, putative [Brucella sp. F5/99] gi|260545618|ref|ZP_05821359.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260566753|ref|ZP_05837223.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260754429|ref|ZP_05866777.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|260757648|ref|ZP_05869996.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|260761475|ref|ZP_05873818.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|260883457|ref|ZP_05895071.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68] gi|261213675|ref|ZP_05927956.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|261218964|ref|ZP_05933245.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|261317327|ref|ZP_05956524.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|261321537|ref|ZP_05960734.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|261324785|ref|ZP_05963982.1| glycine cleavage T-protein [Brucella neotomae 5K33] gi|261751994|ref|ZP_05995703.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|261754653|ref|ZP_05998362.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|261757881|ref|ZP_06001590.1| glycine cleavage T protein [Brucella sp. F5/99] gi|265988365|ref|ZP_06100922.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1] gi|294852030|ref|ZP_06792703.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026] gi|297248038|ref|ZP_06931756.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str. B3196] gi|23347465|gb|AAN29596.1| aminomethyltransferase, putative [Brucella suis 1330] gi|62195759|gb|AAX74059.1| aminomethyltransferase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615656|emb|CAJ10643.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella melitensis biovar Abortus 2308] gi|148371451|gb|ABQ61430.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840] gi|161335448|gb|ABX61753.1| Glycine cleavage T-protein barrel [Brucella canis ATCC 23365] gi|255999264|gb|ACU47663.1| aminomethyltransferase, putative [Brucella microti CCM 4915] gi|260097025|gb|EEW80900.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260156271|gb|EEW91351.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260667966|gb|EEX54906.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|260671907|gb|EEX58728.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|260674537|gb|EEX61358.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|260872985|gb|EEX80054.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68] gi|260915282|gb|EEX82143.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|260924053|gb|EEX90621.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|261294227|gb|EEX97723.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|261296550|gb|EEY00047.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|261300765|gb|EEY04262.1| glycine cleavage T-protein [Brucella neotomae 5K33] gi|261737865|gb|EEY25861.1| glycine cleavage T protein [Brucella sp. F5/99] gi|261741747|gb|EEY29673.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|261744406|gb|EEY32332.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|264660562|gb|EEZ30823.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1] gi|294820619|gb|EFG37618.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026] gi|297175207|gb|EFH34554.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str. B3196] Length = 287 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|163842938|ref|YP_001627342.1| glycine cleavage T-protein barrel [Brucella suis ATCC 23445] gi|163673661|gb|ABY37772.1| Glycine cleavage T-protein barrel [Brucella suis ATCC 23445] Length = 287 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEVDFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVTLPPMGTPITVEGREIGAMGSSASQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|17987565|ref|NP_540199.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M] gi|256044363|ref|ZP_05447267.1| aminomethyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|260563715|ref|ZP_05834201.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|265990778|ref|ZP_06103335.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str. Rev.1] gi|17983269|gb|AAL52463.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260153731|gb|EEW88823.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|263001562|gb|EEZ14137.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str. Rev.1] Length = 287 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|225852188|ref|YP_002732421.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457] gi|256264302|ref|ZP_05466834.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|225640553|gb|ACO00467.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457] gi|263094575|gb|EEZ18373.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|326408688|gb|ADZ65753.1| folate-binding protein YgfZ [Brucella melitensis M28] gi|326538413|gb|ADZ86628.1| folate-binding protein YgfZ [Brucella melitensis M5-90] Length = 287 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 146/270 (54%), Gaps = 9/270 (3%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE 62 V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 8 VNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIEG 66 Query: 63 D-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 F L D + + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 67 GLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F A + + R + H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFP 269 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|158422025|ref|YP_001523317.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571] gi|158328914|dbj|BAF86399.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571] Length = 281 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 94/279 (33%), Positives = 139/279 (49%), Gaps = 14/279 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59 M+ +L ++ + V G A FL ++T ++ +L AR A+L PQGKI+ FLI Sbjct: 1 MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP 60 Query: 60 -IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFID 117 +T +L++ ++ + L+ + Y+LR+NV E Q + +V W E +F D Sbjct: 61 VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD 120 Query: 118 ERF---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 R V+L T E + D Y RI GI + DFL FPH+A MD Sbjct: 121 PRLDELGTRAVVLRAT---AEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQ 177 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLPPSGSPILTDDIEIGTLGV 232 L G+ KGCYIGQEVVSR QHR I R R + ++ G P SG+ I + +G +G Sbjct: 178 LGGVDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGA---PESGTEIKAGEKTVGRIGS 234 Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + G + +A+ R+D+ A G+ L V V P W Sbjct: 235 IAGGQGIALVRLDRAAEAKASGLPLLAGDVEVTLKAPDW 273 >gi|319898698|ref|YP_004158791.1| aminomethyltransferase [Bartonella clarridgeiae 73] gi|319402662|emb|CBI76208.1| aminomethyltransferase [Bartonella clarridgeiae 73] Length = 288 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 6/266 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQAIIT DV + + A+L+PQGK++ FLISKI+ Sbjct: 6 NAINLKNRKIIKVTGEEATHFLQAIITTDVKKINSRELFPGALLSPQGKVIADFLISKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 ++ ++++I S D+ +L+ YKLR V I + + W E N SSF D+R Sbjct: 66 QN-YMIDIAASLADAFHKRLILYKLRKKVEITKPSQEIINVFWQNESDNLNFDSSFTDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G + + + +RI++GI + + D+ +FPHD D ++G+ Sbjct: 125 FPKKEKVV-RIYGKIPFLTPECNAHWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCYIGQEV+SR+ HR IR+R +++ L SGS + + LG V +A Sbjct: 184 FFNKGCYIGQEVISRMHHRRTIRRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCVKNEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRV 264 LA+ RID V A+ K TV V V Sbjct: 243 LALMRIDHVKEAMDKNFQFTVDNVPV 268 >gi|254563637|ref|YP_003070732.1| glycine cleavage T protein [Methylobacterium extorquens DM4] gi|254270915|emb|CAX26920.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens DM4] Length = 284 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 7/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDAAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGFTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHG---VRVKASFPHW 271 LA R+D++ A+ G + G K F H+ Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPDFAHF 274 >gi|148253866|ref|YP_001238451.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. BTAi1] gi|146406039|gb|ABQ34545.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. BTAi1] Length = 294 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 13/280 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ ++V G A FL + T DV L AR A+LTPQGKI++ FL++++ Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLFTTDVSKLHPGEARFGALLTPQGKIIVDFLVTQV 60 Query: 61 EE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSS 114 + F+L++ R+ +L DKL YKLR+ V + + GV+ W+ S Sbjct: 61 PASNGGERFLLDVPRALAQALTDKLNVYKLRAKVAVSNLSDQLGVIAVWDGAVGATPEPS 120 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFP 167 F D R + + G + IA + Y RI+ + DF+ FP Sbjct: 121 FTDPRHESLGARVIASQGALQDIAGGLGAEVVTADAYEAHRIDCAVPRGGLDFMYGDAFP 180 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 H+ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + + Sbjct: 181 HETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGEKSV 240 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 GT+G +K +A+ RID+ A++ G LT G+ ++ + Sbjct: 241 GTMGSASQQKGMALLRIDRATEAMEAGTPLTAGGLTLRVA 280 >gi|256159392|ref|ZP_05457174.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] gi|256254690|ref|ZP_05460226.1| glycine cleavage T-protein barrel [Brucella ceti B1/94] gi|261221868|ref|ZP_05936149.1| glycine cleavage T-protein [Brucella ceti B1/94] gi|265997832|ref|ZP_06110389.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] gi|260920452|gb|EEX87105.1| glycine cleavage T-protein [Brucella ceti B1/94] gi|262552300|gb|EEZ08290.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] Length = 287 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65 Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 F L D + + ++ Y+LR+ I P + V + W + S++ I D Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF A + + R + H + + + +LR +GI + DF +FPHD D G+ Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGC+IG EVVSR+QHR R+R +I LPP G+PI + EIG +G + Sbjct: 182 SFPKGCFIGHEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ RID+V A+ G ++ + S P Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272 >gi|319405464|emb|CBI79083.1| Aminomethyltransferase [Bartonella sp. AR 15-3] Length = 288 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/270 (35%), Positives = 153/270 (56%), Gaps = 8/270 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATHFLQALITTDVTKINSQELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQE--HTFSNSSFIDE 118 ++ ++++I S D+ +L+ YKL + I QP+ ++ + W E N SFID+ Sbjct: 66 QN-YMIDITASLADAFHKRLILYKLHKKIEI-TQPLQEIINVFWQNELDSLNFNLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHE-LRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ RT+G + + Y + +RI++GI + + D+ +FPHD D ++G Sbjct: 124 RFPEKEKVV-RTYGKTPFLIPEYNIYWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCYIGQEV+SRI HR R+R +++ L SGS + + LG + Sbjct: 183 LFFNKGCYIGQEVISRIHHRRTARRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCAKNE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 ALA+ RID V A++K + TV + V S Sbjct: 242 ALALMRIDHVKEAMEKNLQFTVDDIPVTIS 271 >gi|146339093|ref|YP_001204141.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. ORS278] gi|146191899|emb|CAL75904.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. ORS278] Length = 294 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 144/285 (50%), Gaps = 19/285 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ ++V G A FL ++T DV L AR A+LTPQGKI++ FL+++ Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLVTTDVTKLVPGDARFGALLTPQGKIIIDFLVAQA 60 Query: 61 EE----DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWN-QEHTFSNSS 114 + F+L+ R+ +L DKL YKLR+ + + + GV+ WN T + S Sbjct: 61 PTGDAGERFLLDCPRALAQALADKLNLYKLRAKLTVANLSDQLGVIAVWNGTPATALDLS 120 Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164 F D R D L HR ++A Y RI + DF+ Sbjct: 121 FTDPRH---DGLGHRIIAPQTELAEIATRLGAEVVTADAYEAHRIECTVPRGGLDFMYGD 177 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 FP++ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + Sbjct: 178 AFPYETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGE 237 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +GT+G +K LA+ RID+ A++ G LT G+ ++ + P Sbjct: 238 KTVGTMGSAAAQKGLALLRIDRAAEAMEAGTPLTAGGLTLRIADP 282 >gi|27377665|ref|NP_769194.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] gi|27350810|dbj|BAC47819.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 28/290 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L ++ +KV G+ A FL ++T D+ L + R A+LTPQGKI++ FLI+++ Sbjct: 1 MKSAFLPDRGVVKVAGEDARNFLNGLVTTDLDRLKPGLGRFGALLTPQGKIIVDFLITEV 60 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115 F+++ ++ + L KL FYKLR+ +E + GV+ +W+ + +F Sbjct: 61 PAGHGGGFLIDCPKALAEGLATKLKFYKLRAKATVENLSDDLGVLAAWDGALAAQPDLAF 120 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK---------------TYHELRINHGIVDPNTDF 160 D R H G I D+K Y RI G+ DF Sbjct: 121 ADPR--------HDGLGTRILIPEDLKQKLSDLIGAELVDAAAYEAHRIALGVPRGGLDF 172 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 + S FPH+ MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ I Sbjct: 173 MYSDAFPHETNMDRLAGVDFDKGCYVGQEVVSRMQHRGTARTRSVKVLLDGPSPEIGAAI 232 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 L D +GT+G K +A+ RID+V A+ G LT G+ + + P Sbjct: 233 LAGDKPVGTIGSSADGKGIALVRIDRVADALDAGQPLTAGGLALTLAEPE 282 >gi|75676888|ref|YP_319309.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] gi|74421758|gb|ABA05957.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI + FLI++ Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKITVDFLITEA 60 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 + F+++ L KL FYKLR+ V +E + GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLPLAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164 D R +D L R+ E++A+ T Y RI G+ DF Sbjct: 121 ADPR---SDRLGWRSL-VPEELAARAATVIGAELVESADYEAHRIRAGVPSGGADFNFGD 176 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARNRIVRVHLDGGAPEPGTAVVAGE 236 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +GT+G + LA+ R+D+ AI+ G+ LT GV ++ + P K Sbjct: 237 KPVGTMGSSAADQGLALLRLDRAADAIEAGIPLTAGGVPIRVAEPDELK 285 >gi|209886048|ref|YP_002289905.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5] gi|209874244|gb|ACI94040.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5] Length = 313 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 13/273 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +LS++ IKV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I Sbjct: 23 MKSAFLSDRGVIKVGGEDARHFLNGLVTTNIELVRPGLGRFGALLTPQGKIIADFLVTEI 82 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWN-QEHTFSNSSF 115 F+L+ +S L +L YKLR+ V+IE + GV+ W+ Q + +F Sbjct: 83 PAGHGGGFLLDCPKSLAQPLTARLSIYKLRAKVVIENLSDSLGVLAVWDGQPQMTPDLAF 142 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + + L + + Y RI G DF + FPH Sbjct: 143 ADPRDNELGWRILVPAELAEKAAAAIGATMTSEADYEAHRIACGAPRGGVDFGYNDAFPH 202 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 DA MD L+G+ KGCYIGQEVVSR+QHR R R ++ G D SG+ ++ + +G Sbjct: 203 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARNR-IVRVGIDGDVASGTTVMAGEKTVG 261 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 T G G LA+ R+D+V+ AI+ G+A+T G Sbjct: 262 TFGSSAGGHGLALLRVDRVNDAIESGLAVTAEG 294 >gi|316932611|ref|YP_004107593.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1] gi|315600325|gb|ADU42860.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1] Length = 293 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 12/274 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +LS++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MQAAFLSDRGVLKISGPDARHLLNGLVTTDLTKLAPGAGRFGALLTPQGKIVADFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E F Sbjct: 61 PAEDDGGFLLDCPKPLTEALATKLKFYKLRAKVLIENLSDRLGVLALWGGEPPQPPEMGF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T + Y RI G+ DF + FPH Sbjct: 121 RDPRGEQLGWRILVPEILATATAEALGATMATASAYEAHRIGCGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLHGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGAAPQPGSEITAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 T+G + LA+ RID+V A + + L+ GV Sbjct: 241 TMGSSASGRGLALLRIDRVAEAREASVPLSAGGV 274 >gi|299134703|ref|ZP_07027895.1| folate-binding protein YgfZ [Afipia sp. 1NLS2] gi|298590513|gb|EFI50716.1| folate-binding protein YgfZ [Afipia sp. 1NLS2] Length = 291 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 141/273 (51%), Gaps = 13/273 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+++ +KV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I Sbjct: 1 MKSAFLTDRGVVKVGGEDARHFLNGLVTTNIDLVRPGLGRFGALLTPQGKIIADFLVTEI 60 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115 F+L+ +S L +L YKLR+ V IE + GV+ W E + + +F Sbjct: 61 PAGHGGGFLLDCPKSLAQPLAARLSIYKLRAKVAIENLSDAFGVLALWGGEPQMTPDLAF 120 Query: 116 IDERFSIAD--VLLHRTWGHNEKIA-----SDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R VLL + + A D Y RI G DF + FPH Sbjct: 121 ADPRDESLGWRVLLPQEFAGKATTAIGAQMVDETEYEAHRIACGAPRGGIDFAYNDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 DA MD L+G+ KGCYIGQEVVSR+QHR R R ++ G D +G+P+ + +G Sbjct: 181 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARTR-IVRVGLGDAIAAGTPVTAGEKTLG 239 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 T G G + LA+ RID+V A++ G + G Sbjct: 240 TFGSSAGDRGLALLRIDRVADAVEAGTPVLADG 272 >gi|323135653|ref|ZP_08070736.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242] gi|322398744|gb|EFY01263.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242] Length = 273 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 136/274 (49%), Gaps = 24/274 (8%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L+++ I+V G A FL ++T D+ +L AR +A+LTPQGKIL FL+ Sbjct: 3 TAILLADRGVIEVAGADAGKFLHNLVTNDIASLERGEARFAALLTPQGKILFDFLVFATG 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117 E ++L+ S L +L YKLRS + +E N+ +F D Sbjct: 63 EGRYLLDCPLSLAADLEKRLNMYKLRSKLTVE-----------NRSAELEAGAFPDATEA 111 Query: 118 ---ERFSIAD----VLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPH 168 E ++A L R KI + + Y RI G+ DF + FPH Sbjct: 112 PKVEALALASDPRAALGWRAIAEKGKIVALGERGEYDARRIRAGVPLGGVDFTYNDAFPH 171 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MDLL G+ KGCY+GQEVVSR++HR ++RKR D P G I +IEIG Sbjct: 172 EADMDLLAGLDFKKGCYVGQEVVSRMKHRGLVRKRVTPYRAKGDAPAPGETIRAGEIEIG 231 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 G G + LA+ R+D++ A +KG A GV Sbjct: 232 VTGSRAGDEGLALIRLDRLADAKEKGDAPMAGGV 265 >gi|319407037|emb|CBI80674.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 288 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 153/273 (56%), Gaps = 8/273 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKIKSRELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQ--EHTFSNSSFIDE 118 ++ ++++I S D +L Y+L + I I+P+ V+ + WN ++ N SFID+ Sbjct: 66 QN-YMIDIVASLADVFHKRLALYRLHKKIEI-IEPLQEVINVFWNNSLDNLNFNLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G Sbjct: 124 RFPEKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCYIGQEV+SR+ HR R+R +++ L SGS + LG V + Sbjct: 183 LFFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTVKAGTKIFSQLGTCVKNE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 ALA+ RID V AI K + TV + V + P Sbjct: 242 ALALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274 >gi|240850203|ref|YP_002971596.1| aminomethyltransferase [Bartonella grahamii as4aup] gi|240267326|gb|ACS50914.1| aminomethyltransferase [Bartonella grahamii as4aup] Length = 290 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/267 (38%), Positives = 154/267 (57%), Gaps = 8/267 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K + Sbjct: 6 NAICLKNRGLIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGK-K 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFIDE 118 E+ ++++I D+L +LL YKLR V I QP+ +V +S N E N SSFID+ Sbjct: 65 ENGYLIDIRMPLADTLHQRLLLYKLRKKVEI-TQPLQELVTVSLNNESDALNFDSSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ R +G + S+ T+++LRI + I + D+ +FPHD D +NG Sbjct: 124 RFPQKEKII-RIYGKKPFLTSEYHDTWNQLRIRYAIAESGQDYEVGKVFPHDINYDQING 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 IS KGCYIGQE+VSR+ HR R+R I+ G +L P S I +G LG V + Sbjct: 183 ISFNKGCYIGQEIVSRMHHRRAARRRIFIVKGQCELTPQSS-IEAGTKVLGYLGTCVENE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264 ALA+ RID V ++ + TV + V Sbjct: 242 ALALMRIDHVKDSMDHNIPFTVKNIPV 268 >gi|86748242|ref|YP_484738.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris HaA2] gi|86571270|gb|ABD05827.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris HaA2] Length = 293 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 18/288 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ F I++I Sbjct: 1 MKAALLPDRGVIKISGADARHLLNGLVTTDLTLLEPGLGRFGALLTPQGKIVADFFITEI 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ ++ + L KL FYKLR+ V+IE + GV+ W+ +++ +F Sbjct: 61 AAEDDGGFLLDCPKTLAEPLTTKLKFYKLRAKVLIENLSDRLGVLAVWDGAPAATSAPAF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTI 165 D R + ++L H+T E I + D Y RI G DF Sbjct: 121 TDPRNDQLGWRIIVPELLAHKT---AEAIGAELVDAAAYEAHRIACGAPAGGVDFAYGDA 177 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 FPH+A MD L+G+ KGCYIGQEVVSR+ HR R R + + P GS I D Sbjct: 178 FPHEANMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLIDGAAPQPGSEITAGDK 237 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +GT+G LA+ RID+V A + + L G+ ++ P K Sbjct: 238 SVGTMGSSADGCGLALLRIDRVADAREASLPLGAAGIALRLVDPDELK 285 >gi|91975718|ref|YP_568377.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] gi|91682174|gb|ABE38476.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] Length = 293 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 12/285 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59 M + +L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ FLI++ Sbjct: 1 MKAAFLPDRGVIKISGADARHLLNGLVTTDLTLLKPGLGRFGALLTPQGKIVADFLITEG 60 Query: 60 --IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ------EHTF 110 ++ F+++ ++ L DKL FYKLR+ V+IE + GV+ +W E F Sbjct: 61 AAADDGGFLIDCPKALAQPLADKLKFYKLRAKVLIENLSDRLGVLAAWGGAPAETPELAF 120 Query: 111 SNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++ D + I ++L +T D+ Y RI G DF FPH Sbjct: 121 ADPRHDDLGWRIITPELLAQKTAAAIGAELVDVAAYEAHRIACGAPAGGVDFAYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ MD L+G+ KGCYIGQEVVSR+ HR R R + + P +G+ I+ + +G Sbjct: 181 ESNMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLLDGAGPEAGAEIIAGEKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 T+G V LA+ RID+V A + ++ G+ ++ + P K Sbjct: 241 TMGSSVDGHGLALLRIDRVADARDASLPISAGGITLRLADPDELK 285 >gi|115526383|ref|YP_783294.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisA53] gi|115520330|gb|ABJ08314.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisA53] Length = 293 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 140/271 (51%), Gaps = 12/271 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ IK+ G+ A FL ++T D+ R A+LTPQGKI+ FL++++ Sbjct: 1 MKAAFLADRGVIKISGEEARHFLNGLVTTDMTKAEPGQGRFGALLTPQGKIVADFLLTEL 60 Query: 61 -EEDT--FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ED F+++ DR+ L KL FYKLR+ V++E + GV+ W+ E + SF Sbjct: 61 LAEDGGGFLIDCDRALAQPLATKLNFYKLRAKVLVENLSDRLGVLAIWDGEPSPPPEWSF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + + L +T D Y RI G DF FPH Sbjct: 121 ADPRDASLGWRAPVPVELAAKTAAAIGAEWVDASDYDSHRIACGAPAGGVDFRYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+GI +KGCY+GQEVVSR+ HR R R + I P SGS + +D IG Sbjct: 181 EANMDKLHGIDFSKGCYVGQEVVSRMHHRGTARTRTVRIAFDGAAPMSGSDMFANDKPIG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 LG + + LA+ RIDK+ A+ G L V Sbjct: 241 HLGSITNGQGLALVRIDKLADAVDAGERLHV 271 >gi|192289666|ref|YP_001990271.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1] gi|192283415|gb|ACE99795.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1] Length = 293 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 92/274 (33%), Positives = 138/274 (50%), Gaps = 12/274 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T Y RI G+ DF + FPH Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 T+G + LA+ RID+V A + + L+ GV Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGV 274 >gi|296446345|ref|ZP_06888290.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b] gi|296256118|gb|EFH03200.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b] Length = 280 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 144/288 (50%), Gaps = 30/288 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI-SKI 60 S+ LS++ ++V G A FL I+T DV +L AR +A+LTPQGKI+ F+I +K Sbjct: 3 SATLLSDRGVVEVAGPDAAKFLHGILTNDVNSLAAGEARFAALLTPQGKIITDFMIFAKA 62 Query: 61 EED--TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117 ED F+L+ + +++L+D+L FYKLR+ V + ++ F++ +F + Sbjct: 63 AEDGLVFLLDCPAALKETLLDRLKFYKLRAAVTLT-----------DRSGEFASVAFPEA 111 Query: 118 -ERFSIADVLLHR-----TWGHNEKIASDIKT---------YHELRINHGIVDPNTDFLP 162 E+ I + L T G +A + Y RI D DF Sbjct: 112 AEKPEIDAIALAADPRAPTLGWRGLVAKALAVTVATAPRALYDAKRIAAAAPDGGIDFDY 171 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 FPH+A MD L G+ KGC++GQEVVSR++HR +RKR P G+P+ Sbjct: 172 GDAFPHEANMDRLAGVDFKKGCFLGQEVVSRMKHRGPVRKRVTTFHAQGPAPAPGTPVKA 231 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 ++EIG G VG + LA+ R+D++ A G G+ + S P Sbjct: 232 GEVEIGVTGSAVGGEGLALIRLDRLADAKSGGAVPLAGGIALDFSVPE 279 >gi|39934143|ref|NP_946419.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris CGA009] gi|39647991|emb|CAE26511.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris CGA009] Length = 293 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 12/281 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T Y RI G+ DF + FPH Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEINAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 T+G + LA+ RID+V A + + L+ GV + + P Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLAIADP 281 >gi|85714363|ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] gi|85698810|gb|EAQ36679.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] Length = 293 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 20/285 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI+ FLI++ Sbjct: 1 MKAAFLPDRGVVKVIGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKIIFDFLITEA 60 Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 + F+++ + L KL FYKLR+ V +E + GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLALAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164 D R +D L R E++A T Y RI GI DF Sbjct: 121 ADPR---SDKLGWRILA-PEELAGRAATVIGAELVESADYEAHRIAAGIPSGGNDFKFGD 176 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVRLDAGAPEPGTAVVAGE 236 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +GT+G + LA+ R+D+ AI+ G+ LT + + + P Sbjct: 237 KAVGTMGSSAADQGLALLRLDRAADAIEAGIPLTAGDIPIHVAEP 281 >gi|329888212|ref|ZP_08266810.1| aminomethyltransferase folate-binding domain protein [Brevundimonas diminuta ATCC 11568] gi|328846768|gb|EGF96330.1| aminomethyltransferase folate-binding domain protein [Brevundimonas diminuta ATCC 11568] Length = 262 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 136/272 (50%), Gaps = 15/272 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS L +++ I+V G A PFL ++T DV TL R A+L+P G++L I Sbjct: 1 MSIARLDSRALIRVSGPDARPFLHNLLTQDVETLQPGELRFGALLSPPGRLLFDLFIWG- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-NGVVLSWNQEHTFSNSSFIDER 119 EED +L++ +RD+L+ +L YKLR+ V E+ PI + V ++W + D R Sbjct: 60 EEDGVVLDVAAERRDALVQRLSLYKLRAQV--EVMPIPDAVFVAWGVD--VPEGFVADPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L R WG + + + R+ G+ DP D L +P +A DLLNGI Sbjct: 116 LP---GLGGRRWGDQSETDAVEADWQAHRLTLGVPDPTQDALMDKTYPIEADFDLLNGID 172 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQE SR++ R I+ R M IT P G +L ++ G + +A+ Sbjct: 173 FHKGCFIGQETTSRMKRRGTIKNRMMAITFEGPAPERGVEVLKGELRAGEVMTGAEGRAI 232 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 A+ R+D++D LTV G V+ P W Sbjct: 233 ALMRLDRMDG------DLTVEGRPVRVEKPDW 258 >gi|319404024|emb|CBI77612.1| Aminomethyltransferase [Bartonella rochalimae ATCC BAA-1498] Length = 288 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKINSRELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119 ++ ++++I S D +L YKL + I +Q + V + + ++ N SF+D+R Sbjct: 66 QN-YMIDIVASLADVFHKRLTLYKLHKKIEITEPLQEVINVFWNNDLDNLNFNLSFVDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G+ Sbjct: 125 FPKKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCYIGQEV+SR+ HR R+R +++ L SGS I LG V +A Sbjct: 184 FFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTIKAGTKIFSQLGTCVKNEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V AI K + TV + V + P Sbjct: 243 LALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274 >gi|220920725|ref|YP_002496026.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060] gi|219945331|gb|ACL55723.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060] Length = 276 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/273 (33%), Positives = 138/273 (50%), Gaps = 8/273 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L++++ + + G A FLQ +IT +V TLP AR A+L PQGKIL FL+S+ Sbjct: 1 MPIASLTDRAVLALTGDDAPGFLQGLITCNVETLPPDEARLGALLAPQGKILFDFLLSRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D F L+ R+ L+ +L Y+LR+ V P+ V +W E S D R Sbjct: 61 G-DGFHLDAPRAVLPDLMRRLTLYRLRARVAFAQTPLR-VFAAWGAEP--EGSWLRDGRL 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L+ G + + + + RI G+ + DF FPH+ALMD L G+ Sbjct: 117 PALGWRLYAPEGGEPAVDATPEAFQAHRIALGVPESGADFALGDAFPHEALMDQLGGVDF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R P++ G P+G+P+ +G G G + Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPLLYPGAAV--PAGTPVTAGARALGQTGSAAGDRG 234 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 L + R+D++ A+ G + G+ V+ + P + Sbjct: 235 LGLLRLDRLADAVAAGERVEAGGLSVRVAKPDF 267 >gi|49475310|ref|YP_033351.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1] gi|49238116|emb|CAF27323.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1] Length = 285 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 8/270 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK+L FLI K Sbjct: 6 NAICLKNRKIIKVTGEEATHFLQALITTDVKKIGLQEIFPGALLSPQGKVLADFLIGK-R 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSN--SSFIDE 118 ED + ++I S D L +LL YK+R+ V I +QP+ V +SW E N SSFID+ Sbjct: 65 EDGYFIDIFSSLSDLLYKRLLLYKMRTKVEI-MQPLQEFVTVSWENETDSLNFYSSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ R +G +AS+ ++ LRI + I + + D+ +FPHD D +NG Sbjct: 124 RFPAKEKII-RIYGETPFLASECHDNWNRLRIRYAIPESDKDYEIGKVFPHDINYDQING 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 ++ KGCYIGQEVVSR+ HR R+R +++ +L P G+ I+ +G+LG + Sbjct: 183 LAFNKGCYIGQEVVSRMHHRRAARRRILLVKSQHELIP-GANIVAGTKILGSLGTCAANE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 ALA+ RID + A+ TV V V S Sbjct: 242 ALALMRIDHIKDAMDHNTPFTVKDVPVTIS 271 >gi|154245363|ref|YP_001416321.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] gi|154159448|gb|ABS66664.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] Length = 292 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 131/273 (47%), Gaps = 4/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M VYL+++ I+ G A FL +IT +V T+ AR A+LTPQGKI+ FL Sbjct: 1 MPVVYLTDRVLIRATGPEASKFLHGVITCNVQTMATGDARYGALLTPQGKIISDFLFYAE 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F+ ++ + + L+ +L F++LR+ V V + + + D R Sbjct: 61 GDDAFLFDVPAERAEDLLKRLTFHRLRAKVTFTKADDLAVAAVFGDAAEVPEGALYPDPR 120 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + L + ++SD Y RI GI DF FPH+A MD L G+ Sbjct: 121 LAALGQRLVLPLTAAQALSSDPALYEAHRIALGIPKGGPDFTYGDTFPHEADMDQLGGVD 180 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR++HR+ R R ++ D P +G I D +G + V + Sbjct: 181 FKKGCYVGQEVVSRMEHRSTPRNR--LVEVLFDTPLATGQEITAGDKSVGQVLSVTDGRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +A R+D+ + A G+ L V V+ P W Sbjct: 239 IATVRLDRANDAKTDGVPLLAGEVPVELRRPDW 271 >gi|170750384|ref|YP_001756644.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM 2831] gi|170656906|gb|ACB25961.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM 2831] Length = 283 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 124/254 (48%), Gaps = 2/254 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A LQ ++T +V TL AR A+LTPQGKIL FLIS+I Sbjct: 1 MPVALLPDRALVTVTGPDATTLLQGVLTCNVETLRPGEARLGALLTPQGKILFDFLISRI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D F ++ + L +L Y+LR+ I P V +W + + D R Sbjct: 61 P-DGFRFDVLADRAADLAKRLTLYRLRAQATIAADPTVAVAAAWAGATPPAAEAVADTRA 119 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 VDLGARLYAAAGAFSADAAEAD-YHAHRIALGVPEGGRDFAFGDAFPHEALMDQLGGVDF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R R + D P G+ I +GT G G + LA Sbjct: 179 RKGCYVGQEVVSRMQHRGTARTRILAAAYPDAAPAPGTEITAGGKVLGTAGSAAGNRGLA 238 Query: 241 IARIDKVDHAIKKG 254 R+D++ A+ G Sbjct: 239 TIRLDRLGDALAAG 252 >gi|170740023|ref|YP_001768678.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46] gi|168194297|gb|ACA16244.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46] Length = 277 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 4/203 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ ++T +V TLP AR A+LTPQGK+L+ FLIS+ Sbjct: 1 MPIALLPDRAVLSVAGDDAPGFLQGLVTCNVETLPPGEARLGALLTPQGKVLIDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E F L++ R+ L +L Y+LR+ V P+ V+ W + + D R Sbjct: 61 AEG-FALDVARALLPDLTRRLTLYRLRAKVAFAEAPLR-VLAVWGGPP--AGAWLRDGRL 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 H G + + Y RI G+ + DF FPH+ALMD L G+ Sbjct: 117 PALGWRRHAGEGEGPAPDATAEDYAAHRIGLGVPEGGADFALGDAFPHEALMDQLGGVDF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203 KGCY+GQEVVSR+QHR R R Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTR 199 >gi|163867998|ref|YP_001609202.1| aminomethyltransferase [Bartonella tribocorum CIP 105476] gi|161017649|emb|CAK01207.1| aminomethyltransferase [Bartonella tribocorum CIP 105476] Length = 290 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 156/273 (57%), Gaps = 18/273 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K Sbjct: 5 QNAICLKNRGIIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGK- 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFID 117 ED + ++I+ S D+L +LL YKLR V I QP+ +V +SW E N S+F+D Sbjct: 64 REDGYFIDIEISLADTLYKRLLLYKLRKKVEI-TQPLQELVTVSWKNESDTLNFDSNFVD 122 Query: 118 ERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 +RF + ++ R +G +AS D T+++LRI + I + D+ IFPHD D +N Sbjct: 123 KRFPEQEKII-RIYGKIPFLASEDYDTWNQLRIRYAIAESGQDYEVGKIFPHDINYDQIN 181 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT-----LG 231 G+S KGCYIGQE+VSR+ HR R+R +II DL P S IE GT LG Sbjct: 182 GLSFNKGCYIGQEIVSRMHHRRAARRRILIIKSQCDLSPQSS------IEAGTKVLGHLG 235 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 V +ALA+ RID V A+ + TV + V Sbjct: 236 TCVTNEALALMRIDHVKDAMDHNIPFTVKNIPV 268 >gi|154251204|ref|YP_001412028.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] gi|154155154|gb|ABS62371.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] Length = 316 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 19/280 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--IEED 63 LS + ++V G A FLQ ++T +V A +A+LTPQGK LL F I+ ++D Sbjct: 26 LSKRGVLRVAGPEARSFLQGLVTNNVDLATGMTAIYAALLTPQGKFLLDFFIAADPADKD 85 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHT--FSNSSFIDERF 120 +L+ D ++ ++L+ +L YKLR+ V IE VL+ WN++ + F D R Sbjct: 86 AVLLDCDGARAEALMKRLTMYKLRAKVTIEDLSEKLAVLALWNEDGSPLTEGPGFADPRL 145 Query: 121 SIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 G K S K YH LRI HG+ D DF P FP + + Sbjct: 146 PGMGRRAILASGEVGKAISAAKAREAGEDEYHRLRIMHGVGDAAQDFEPDRTFPLEVNIA 205 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL--G 231 LNGI KGC++GQEV SR + R +RKR + D+PP G+ + E+GT+ G Sbjct: 206 ELNGIDFHKGCFVGQEVTSRTKRRGSVRKRLLPAHVEGDMPPHGTQVKGVAREVGTILSG 265 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + LA+ R+D + +G L ++ P W Sbjct: 266 DAETSRVLALLRLDLI-----RGSVLEAGYAEIRPEVPSW 300 >gi|319408291|emb|CBI81944.1| aminomethyltransferase [Bartonella schoenbuchensis R1] Length = 288 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 8/267 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NTISLKNRKIIKVIGEKATRFLQALITTDVEKINSQELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNS--SFIDE 118 + ++++I D+ +L+ YKL + V I QP+ VV + W E + + SFID+ Sbjct: 66 QG-YMIDIAAPLADTFQQRLILYKLHTKVEI-TQPLQLVVTVFWKTEISTCDFDLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ R +G +A + ++ +RI + I + D+ +FPHD D ++G Sbjct: 124 RFPKKEKMV-RVYGKIPFLAPEHNDNWNRMRIRYAIAESGQDYEIGKVFPHDINYDQISG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +S KGCYIGQEVVSR+ HR R+R +I+ G L P GS I +G LG V + Sbjct: 183 LSFNKGCYIGQEVVSRMHHRRAARRRFLIVKGQHKLMP-GSTIQAGTKILGELGTCVENE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264 ALA+ RID V + K + T+ + V Sbjct: 242 ALALMRIDHVKDVMDKHIPFTIENLPV 268 >gi|300023505|ref|YP_003756116.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC 51888] gi|299525326|gb|ADJ23795.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC 51888] Length = 298 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 22/273 (8%) Query: 1 MSSV---YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 MSSV L+++ ++V G + LQ+++T ++ L AR + +L+PQGKIL F I Sbjct: 1 MSSVKIARLTDRGVVRVDGADSEKLLQSLVTNEIEGLNAGEARFAGLLSPQGKILFDFFI 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-----EHTFS 111 + E ++L++ +K L+ +L YKLR++V I + P V W+ T + Sbjct: 61 VRTEM-GYLLDVAAAKAADLVKRLTMYKLRADVTITDASPGFAVYAVWDDGAAALTATRA 119 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164 F D R V W +D + Y LR+ G+ + DF Sbjct: 120 CVHFNDPRHPAMGV----RWLMQSPPPADAQVVELAHIDYDALRVRLGVPEAGKDFEFGD 175 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 +PH+A DL NG+S TKGCY+GQE+V+R+Q++ ++RKR + I+ T L SG+ I D Sbjct: 176 AYPHEADYDLFNGVSFTKGCYVGQEIVARMQNKTVVRKRVVKISATAPL-ISGAEIHLGD 234 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + IG +G V G LA+ R+D+ A K L Sbjct: 235 VAIGRVGTVDGLHGLAMVRLDRAIEAQDKNQRL 267 >gi|197104040|ref|YP_002129417.1| aminomethyltransferase [Phenylobacterium zucineum HLK1] gi|196477460|gb|ACG76988.1| aminomethyltransferase [Phenylobacterium zucineum HLK1] Length = 268 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 138/273 (50%), Gaps = 13/273 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ V L++++ I V G FLQ ++T DV TL AR A+LTPQG+ LLY L + Sbjct: 1 MTIVQLTSRAVIAVGGPEWRSFLQGLLTQDVETLQPGQARFGALLTPQGR-LLYDLFAVG 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ED +L+++ + RD+L+ +L Y+LR+ V + P V ++ +I R Sbjct: 60 AEDGCLLDVEAAHRDALLQRLTMYRLRAKVELSA-PDTAVFAAFPDA---PGPGWI--RD 113 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R +G E+ SD Y R+ G+ P D+ + +P +A DLL GI Sbjct: 114 PRRPELGWRGYGLAERATSDEAAYDAHRLRLGVPGP-ADWGTDSTYPIEADFDLLAGIDF 172 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQE SR++ R I+ R + I P SG+ IL D+ G + +A+A Sbjct: 173 KKGCFVGQETTSRMKRRGQIKSRMLPIVFEGPPPASGTEILAGDLRAGEVLSGTEGRAMA 232 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + R+D+ G LT G V+ P W++ Sbjct: 233 LVRLDRA-----LGADLTADGRPVRVEPPAWFE 260 >gi|298293892|ref|YP_003695831.1| folate-binding protein YgfZ [Starkeya novella DSM 506] gi|296930403|gb|ADH91212.1| folate-binding protein YgfZ [Starkeya novella DSM 506] Length = 282 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 131/275 (47%), Gaps = 9/275 (3%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++ ++ G A FL ++TA T AR SA+LTPQGKI+ ++ Sbjct: 1 MPIAILKERAVARIAGADAAHFLDNLLTAR--TPEPGEARYSALLTPQGKIVADMIVVAT 58 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDER 119 E F L++ R L+ +L Y+LR+ V I + V ++W ++ ++ D R Sbjct: 59 E-GGFRLDVPRLAVPDLVKRLQLYRLRAKVEIGVLDDLVVAVAWGGSSPLVDAFAYDDPR 117 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 G +IA + +H RI G+ + DFL FPH+A MD L GI Sbjct: 118 LPELGRRFLLPAGEASQIAMVPEAQWHAHRIALGVPEGGMDFLYGDAFPHEADMDQLGGI 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 KGCY+GQE+VSR+QHR R R P + G P G+PIL IG LG V Sbjct: 178 DFDKGCYVGQEIVSRMQHRGTARTRIIPFALCGPS--PAEGTPILAGGKSIGRLGSGVEG 235 Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +AL + R+D+++ A + G + P W Sbjct: 236 RALGLVRLDRLEEARAARHVIEADGAALVPERPDW 270 >gi|16124640|ref|NP_419204.1| aminomethyltransferase [Caulobacter crescentus CB15] gi|13421542|gb|AAK22372.1| aminomethyltransferase, putative [Caulobacter crescentus CB15] Length = 263 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 13/266 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++++ I V G FLQ ++T DV TL R + +LTPQGK LLY L ED Sbjct: 9 LASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGK-LLYDLFVAGAEDGA 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + RD+++ +L Y+LR+ V E+ + V++ T + D R Sbjct: 68 LLDVAAAHRDAILTRLSMYRLRAKV--ELVASDRPVIAVFGGATSGEGLYADPRLP---A 122 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + +D Y R+ G+ P TD+ +P +A DLL GI KGC+ Sbjct: 123 LGARAY-DDRATNADEDVYEAHRLALGVPGP-TDWGSEATYPIEANFDLLAGIDFKKGCF 180 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ R+D Sbjct: 181 VGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALLRLD 240 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271 +++ G+ALTV G V+ P W Sbjct: 241 RIE-----GVALTVEGRPVRVERPDW 261 >gi|114569363|ref|YP_756043.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis maris MCS10] gi|114339825|gb|ABI65105.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis maris MCS10] Length = 273 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 11/245 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + V G A LQ +ITADV TL R A+LTPQGKIL+ F++ + DT Sbjct: 11 LPDRQIMSVSGPDARDLLQRLITADVQTLSAGTCRPGALLTPQGKILVDFMMFA-DGDTV 69 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L++ D L+ +L +KLR+ I + N +L+ F S D R Sbjct: 70 WLDVPAGAADGLLKRLTMFKLRARAEIVL---NTNILALWSTTPFPGSCE-DPRLG---G 122 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +HR G + AS+ + + I GI D+ + +FP D +D G+ KGC+ Sbjct: 123 RVHRGLG---EAASETRALDMIEIEAGIPAFGRDYGEADVFPTDVNLDAFGGVGWKKGCF 179 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 IGQEVVSR++ R IRKR + T + PP G+ ++ +G + G A+ +AR+D Sbjct: 180 IGQEVVSRMKRRGTIRKRSLPATFAAEAPPPGTAVMAGPTTVGAISSASGHHAVILARLD 239 Query: 246 KVDHA 250 ++ A Sbjct: 240 RLRAA 244 >gi|221233328|ref|YP_002515764.1| aminomethyltransferase family protein [Caulobacter crescentus NA1000] gi|220962500|gb|ACL93856.1| aminomethyltransferase family protein [Caulobacter crescentus NA1000] Length = 281 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 13/266 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++++ I V G FLQ ++T DV TL R + +LTPQGK LLY L ED Sbjct: 27 LASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGK-LLYDLFVAGAEDGA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + RD+++ +L Y+LR+ V E+ + V++ T + D R Sbjct: 86 LLDVAAAHRDAILTRLSMYRLRAKV--ELVASDRPVIAVFGGATSGEGLYADPRLP---A 140 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + +D Y R+ G+ P TD+ +P +A DLL GI KGC+ Sbjct: 141 LGARAY-DDRATNADEDVYEAHRLALGVPGP-TDWGSEATYPIEANFDLLAGIDFKKGCF 198 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ R+D Sbjct: 199 VGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALLRLD 258 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271 +++ G+ALTV G V+ P W Sbjct: 259 RIE-----GVALTVEGRPVRVERPDW 279 >gi|295687807|ref|YP_003591500.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756] gi|295429710|gb|ADG08882.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756] Length = 264 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 23/271 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++++ I V G FLQ ++T DV TL R S +LTPQGK LLY L ED Sbjct: 9 LTSRAVIAVSGPDWRSFLQGLLTQDVETLAPGELRFSGLLTPQGK-LLYDLFVAGTEDGA 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L++ + RD+L+ +L Y+LR+ V +E +P++ V + D R Sbjct: 68 LLDVQAAHRDALLQRLSMYRLRAKVTLEASDRPVSAVFGG----AVAGQGLYADPRLP-- 121 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 L R + + +D Y R+ G+ P D+ +P +A DLL GI KG Sbjct: 122 -ALGARAY-DDRAANADEDAYDAHRLALGVPGP-ADWGEEKTYPIEANFDLLAGIDFKKG 178 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGK--KALA 240 C++GQE SR++ R I+ R + IT D PP+ G+ +L ++ G V+ G+ +ALA Sbjct: 179 CFVGQETTSRMKRRGTIKNRMLPIT-FDGPPPAFGAEVLAGELRAGE--VLGGRDGRALA 235 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + R+D++D G LTV G V P W Sbjct: 236 LLRLDRID-----GADLTVDGRPVAVDRPAW 261 >gi|254419445|ref|ZP_05033169.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas sp. BAL3] gi|196185622|gb|EDX80598.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas sp. BAL3] Length = 272 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 26/279 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M LS+++ I + G+ A PFL ++T DV TL R A+L+P G++L I Sbjct: 1 MPIARLSSRALISITGEEARPFLHNLLTQDVETLGDGELRFGALLSPPGRLLFDLFILG- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119 E + +L++ +R++LI +L YKLR+ V + V +W + + FI D R Sbjct: 60 EAEGVLLDVAAERREALIQRLSMYKLRAKVQVAAD-DRPVFAAWPD----APAGFIFDPR 114 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + + R +G A+ Y + R++ G+ DP D I+P +A DLLNGI Sbjct: 115 TPL---MGGRLYGEAAADAT-EADYDQHRLSVGVPDPTADAPQDKIYPIEADFDLLNGID 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK-- 237 KGC++GQE SR++ R I+ R + I PP G+ +L ++ G V+ G++ Sbjct: 171 FQKGCFVGQETTSRMKRRGAIKNRMLAIDFDGPPPPFGAEVLKGELRAGE--VLSGRQRS 228 Query: 238 -----ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 A+A+ RID++D LTV G V+ P W Sbjct: 229 DGGGSAMALLRIDRLDG------DLTVEGRPVRLRKPSW 261 >gi|114328650|ref|YP_745807.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] gi|114316824|gb|ABI62884.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] Length = 278 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 130/253 (51%), Gaps = 3/253 (1%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIE 61 S L +++ + V G+ + FLQ +++ DV LT P + A +A+LTPQGK + F I + Sbjct: 8 SALLPHRAVLAVTGEDRVTFLQGLVSNDVTLTAPGQ-AIWAAMLTPQGKWIADFFIFS-D 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 +L+++ ++ LI KL ++LR+ V I + V W + S + Sbjct: 66 GQRLLLDVEATQAAMLIQKLSRFRLRARVAISAESDLHVHAGWGSAPIPAGSVCVAPDPR 125 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + + G D Y R++ G+ D + D +A D LNGIS T Sbjct: 126 LPEAGWRALTGAGILPEGDAAAYDTHRLSLGLPDGSADLEAEKTVLLEAGFDELNGISWT 185 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQE+ +R ++R ++++R + +TG LPP +P++ D E+GT+ GK LAI Sbjct: 186 KGCYMGQELTARTRYRGLLKRRLVPVTGHAPLPPRETPLMQDGKEVGTMRSSRGKTGLAI 245 Query: 242 ARIDKVDHAIKKG 254 R++ + ++ G Sbjct: 246 LRLEALHAPVQAG 258 >gi|258542812|ref|YP_003188245.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01] gi|256633890|dbj|BAH99865.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01] gi|256636949|dbj|BAI02918.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-03] gi|256640002|dbj|BAI05964.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-07] gi|256643058|dbj|BAI09013.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-22] gi|256646113|dbj|BAI12061.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-26] gi|256649166|dbj|BAI15107.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-32] gi|256652153|dbj|BAI18087.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655210|dbj|BAI21137.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-12] Length = 291 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 13/273 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 L N++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ +F++S ++ Sbjct: 10 LKNRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDDTC 69 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNS-SFIDERF 120 +L+ + ++L L ++LRS+V ++I + V ++W + N+ SF D R Sbjct: 70 LLLDCATEQVENLKTTLQRFRLRSDVQLDITALP-VHVAWGNPPPDSVLENAISFRDPRL 128 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A L + I + + Y+ R+ G+ D D +A +DLL G+S Sbjct: 129 EEAGWRLIDA-APDTLITATEQGYNLHRLVLGLPDGVQDCEVGRTLAAEANLDLLGGVSW 187 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV +R+ +R ++++R M + T LP G+P+L D +E+GTL LA Sbjct: 188 KKGCYMGQEVTARMHYRTLVKRRLMPVAATSPLPAPGTPVLCDGVEVGTLRSSQDHVGLA 247 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + + D A + H + V+ P W + Sbjct: 248 LLKTD----AANNQLTCAAHPLVVR--LPAWQE 274 >gi|302384135|ref|YP_003819958.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC 15264] gi|302194763|gb|ADL02335.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC 15264] Length = 265 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 15/268 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L++++ I+V G A PFL ++T DV T+ R A+L+P G+ LL+ L E D Sbjct: 6 AHLTSRALIRVSGTDAKPFLHNLLTQDVETIADGEVRFGAMLSPPGR-LLFDLFLWGEAD 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L++ +R +LI +L YKLR+ V I + SW + +D R S Sbjct: 65 GVVLDVAADRRAALIQRLSMYKLRAQVEIAADE-RPALASWP---GVAAGFVVDPRTS-- 118 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + R G + A++ + R++ G+ DP D +P +A DLLNGI KG Sbjct: 119 -AMGGRAIGDHVPDATEAD-HDAHRLSVGVPDPAADAGSDRTYPIEANFDLLNGIDFQKG 176 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C++GQE SR++ R I+KR + +T P +G+ +L + G + A+A+ R Sbjct: 177 CFVGQETTSRMKRRGEIKKRMLPLTFDGAAPAAGTEVLNGALRAGEVLTGRDGAAMALVR 236 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 +D++D L V G V +P W Sbjct: 237 LDRLDG------PLMVEGRPVAVLYPEW 258 >gi|182677705|ref|YP_001831851.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC 9039] gi|182633588|gb|ACB94362.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC 9039] Length = 291 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 8/278 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + +L+++ +K+ G A L +IT +L AR SA+LTPQGK+L F I + Sbjct: 4 GTCFLADRGVLKIVG-DATALLHKVITNTMLNFVPGEARYSALLTPQGKLLFDFFILPLP 62 Query: 62 EDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSS--- 114 E ++++ + + L+ ++ F+K+R+ +E + GV W + + Sbjct: 63 EGPEAGYLIDCAKEQSADLLKRINFHKMRAKFTVEDVSEQFGVAAFWGSDPAPAIEGAVI 122 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 ++D R L + + +D Y R++ G+ DF F HDA +D Sbjct: 123 YLDPRAPEMGKRLIASRAALAALPADTTAYEAHRVSLGVPKGGVDFPYGDTFLHDANIDR 182 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 NG+ KGCY+GQEVV+R+ R RKR + + P G+ I + IG + Sbjct: 183 CNGVDFKKGCYVGQEVVARVHFRRSARKRIIPLHFEGPTPALGTEIKAGETSIGQVSSTA 242 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G LA+ R+D+++ A G + V+A P + Sbjct: 243 GAAGLAMLRLDRLEDARTAGTPVKAGEAVVEAFVPAEF 280 >gi|23015098|ref|ZP_00054885.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 300 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 25/290 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V+L ++ ++V G+ FLQ +++ D+ + A + +LTPQGK L + ++ D Sbjct: 7 VHLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVFTGLLTPQGKFLYDLFVVELG-D 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQE------HT 109 F++E + ++ + L KL YKLRS V I + GV +++ E Sbjct: 66 VFLIEAEAARLEDLRKKLSMYKLRSKVTIAVASNMAVFGLMGEGVAAAFDLEPQAGAATE 125 Query: 110 FSNSS-FIDERFSIADV--LLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFL 161 F+ S F+D R + + LL G A+D K ++ E RI G+ D + D Sbjct: 126 FAGGSVFVDPRLAEGGLRALLPVDGGPRVLEANDFKPAPFHSWDEARIRLGLPDGSRDLE 185 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + + LNG+ KGCY+GQE+ +R ++R +++KR M + +P G+ I Sbjct: 186 VDKALLLENGFEELNGVDFNKGCYMGQELTARTKYRGLVKKRLMPVEVNGPMPAPGTVIH 245 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + E G + G LA+ R+D+ GM TV R+ A+ P W Sbjct: 246 LGEAEAGEMRSACGHAGLALIRLDQ--WRASGGMGFTVGTARLDAAKPKW 293 >gi|67459203|ref|YP_246827.1| glycine cleavage T-protein [Rickettsia felis URRWXCal2] gi|67004736|gb|AAY61662.1| Glycine cleavage T-protein [Rickettsia felis URRWXCal2] Length = 282 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 25/285 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--SKIEED 63 LSN+ IK+ G ++ FLQ ++T D+ Y + +L QG+ L F + K+EE Sbjct: 5 LSNREIIKIIGLDSVKFLQNLVTNDICKSSYCY---TYLLNNQGRYLFDFFVYVHKLEE- 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L+ID+S + +LI+ L FYK RS + II+ +V S + + + D R+S+ Sbjct: 61 -IYLDIDKSNKAALIEYLNFYKFRSKIQIIDCSEEYKIVYSHQKLDIDTLVTSRDPRYSM 119 Query: 123 ---ADVLLHR--TWGHNEKIASD--------IKTYHELRINHGIVDPNTDFLPSTIFPHD 169 +L R T G D + Y E + N I+D D + P+ Sbjct: 120 LGFRSILSSRGLTTGSRNTGKQDWIPWSSHGMTIYLEDKYNFAIIDGVEDLITDKSIPNM 179 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI 227 + LN IS KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +I Sbjct: 180 YGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKI 239 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G + KA+A+ R +K + K +TV G+++ S WY Sbjct: 240 GVICTSYRNKAIALIREEK--YLACKKSDITVKGIKINLSLAPWY 282 >gi|329114590|ref|ZP_08243349.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001] gi|326696070|gb|EGE47752.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001] Length = 291 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 7/251 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 L ++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ +F++S ++ Sbjct: 10 LEKRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDDTC 69 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNS-SFIDERF 120 +L+ + ++L L ++LRS+V +E+ + V ++W + N+ SF D R Sbjct: 70 LLLDCATEQAENLKTTLRRFRLRSDVQLELTALP-VHVAWGNPPPDSVLENAISFRDPRL 128 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A L + I + + Y+ RI G+ D D +A +DLL G+S Sbjct: 129 EDAGWRLIDA-APDTPITATEQDYNLHRIILGLPDGVQDCEVGRTLAAEANLDLLGGVSW 187 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV +R+ +R ++++R M I T LP G+ +L + +E+GTL LA Sbjct: 188 KKGCYMGQEVTARMHYRTLVKRRLMPIAATSPLPAPGTSVLCNGVEVGTLRSSQDHVGLA 247 Query: 241 IARIDKVDHAI 251 + + + ++ + Sbjct: 248 LLKTEAANNQL 258 >gi|217977284|ref|YP_002361431.1| folate-binding protein YgfZ [Methylocella silvestris BL2] gi|217502660|gb|ACK50069.1| folate-binding protein YgfZ [Methylocella silvestris BL2] Length = 279 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +L+++ ++V G A FLQ +IT VL + +R SA+L+PQGK++ F + + E Sbjct: 7 FLADRGVVRVLGAEAEKFLQRLITNSVLAIAPGESRFSALLSPQGKLMFDFFVVPLPEGP 66 Query: 65 ---FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120 + + R++ L+ +L +K+R+ + IE + GV E + + R Sbjct: 67 EAGYYFDCVRAQAPDLVKRLNLHKMRAKISIEDLSETLGVAALIAGEAPSGIGALV-YRD 125 Query: 121 SIADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 A + R E + SD Y RI G+ DF+ F D +D LN Sbjct: 126 MRAPGMGERVIASREALERISDSDESAYEARRIAAGVPRGGRDFVYGDAFVQDVNLDWLN 185 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 G+ KGCY+GQEVV+R+ +R +KR + + + P G I +G +G + G Sbjct: 186 GVDFKKGCYVGQEVVARVHYRKSAKKRIVKFSFEGEPPAPGVEIAAGGPPLGQVGSISGS 245 Query: 237 KALAIARIDKVD 248 + LA+ R+D+++ Sbjct: 246 EGLAMIRLDRLE 257 >gi|296116365|ref|ZP_06834980.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769] gi|295977065|gb|EFG83828.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 20/278 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62 YL +++ + V GK + FLQ +++ D+ T+ A +A L+ QGK L +F+ + Sbjct: 5 AYLPDRAVLAVSGKDRVSFLQGLVSNDMTTVTPDRAAWTAFLSAQGKWLADFFVFADPHG 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS- 121 + +L+ D ++ +L +L Y+LR++V I + V W+ ++ DERF Sbjct: 65 ERLLLDCDATQAATLRTRLSRYRLRTDVDIS-ETGYAVHAQWD------GTAPADERFPG 117 Query: 122 -----IADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + D+ GH + +D Y R++ G+ D D +A D L Sbjct: 118 SADPRLPDIGWRMLLGHVAPDVTADALDYDRHRLSLGLPDGVRDCESGKTLLLEANFDQL 177 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NGIS TKGCY+GQE+ +R ++R ++R+ + + G DLP +PI+ D ++G + Sbjct: 178 NGISWTKGCYMGQELTARTRYRGLVRRHLLPVEGAHDLPEPATPIMHDGHKVGEIRSSRD 237 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + +A+ R H G+ H V ++ P W++ Sbjct: 238 QAGMAMIR---SSHIHTPGLTAAGHPVSIR--VPPWFR 270 >gi|218459788|ref|ZP_03499879.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli Kim 5] Length = 131 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/115 (43%), Positives = 67/115 (58%) Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 +DF FPHD L+DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP + Sbjct: 3 GSDFALQDAFPHDVLLDLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGT 62 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G+ I D +GTLG V G LAI R+D+ A+ +G L G V + P W Sbjct: 63 GTEITAADKPVGTLGSVAGGSGLAIVRVDRAGAAMAEGTPLLAGGTPVALALPQW 117 >gi|254293508|ref|YP_003059531.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814] gi|254042039|gb|ACT58834.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814] Length = 274 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 10/251 (3%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+ + V G A FL ++T VL + +R +A+L PQGKI+ L+ K E Sbjct: 5 VCLENRVVLCVDGVDAETFLNGLLTNSVLNMEMGQSRYAALLMPQGKIICDLLLLKTET- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F+L++ ++L+ +L ++L++ V I ++ GV + H + +R Sbjct: 64 GFLLDVPAQADEALMKRLKMFRLKAQVDISLKDDLGVYAFIDDGHPDPRHPDMPKR---- 119 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + W + + K Y+ RI + + DF + +FP D MDLLNGI KG Sbjct: 120 QIGPKDLWENTSR-----KDYNITRIKLNVPELGKDFGDNEVFPADINMDLLNGIDFKKG 174 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C++GQEVVSR++ R R+R + + P + +P+ + +G + ALA R Sbjct: 175 CFVGQEVVSRMKRRGTARRRTLAFHFPNGAPDATTPLYLGETLLGEISSSTSDYALARIR 234 Query: 244 IDKVDHAIKKG 254 ID++ A +G Sbjct: 235 IDRLAKAQAEG 245 >gi|288958954|ref|YP_003449295.1| protein [Azospirillum sp. B510] gi|288911262|dbj|BAI72751.1| protein [Azospirillum sp. B510] Length = 308 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 31/302 (10%) Query: 1 MSSVY--LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 MS+ Y L +S + V G+ FLQ +++ DVL + A + LTPQGK L F++ Sbjct: 1 MSAGYTVLDRRSVVAVTGEDRKAFLQGLVSNDVLRVTPDHAAYALFLTPQGKFLHDFMMV 60 Query: 59 KIEEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---------------GV 100 + E+D +L+ + +R L+ +L YKLRS + +E + G+ Sbjct: 61 ESEDDAGPALLLDPETDRRADLLRRLKMYKLRSKIALEDRAERLRVVIAFGEGALAALGL 120 Query: 101 VLSWNQEHTFSNS-SFIDERF-SIADVLLHRTWGHNEKIAS---------DIKTYHELRI 149 F+ +F D R + L G +A+ D Y LR+ Sbjct: 121 PAEPGAARPFAGGVAFTDPRLPGLGARLFLPVNGPVNGLAALEAAGLGGRDAAEYDRLRL 180 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + G+ D D +P P ++ MD LN IS KGCY+GQE+ +R ++R +I+K+ +T Sbjct: 181 SLGVPDGTLDLIPEKSIPLESRMDALNAISWDKGCYMGQELTARTKYRALIKKKLFPVTF 240 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +P +G+P+ D E+G + ALA+ R++ V A G L + P Sbjct: 241 DGPIPEAGTPVTLDGKEVGEIRSGRDAAALALLRLEDVQLAAANGSVLQAGSATLTPCDP 300 Query: 270 HW 271 W Sbjct: 301 EW 302 >gi|162149036|ref|YP_001603497.1| aminomethyltransferase protein (glycine cleavage) [Gluconacetobacter diazotrophicus PAl 5] gi|209545215|ref|YP_002277444.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl 5] gi|161787613|emb|CAP57209.1| putative aminomethyltransferase protein (glycine cleavage) [Gluconacetobacter diazotrophicus PAl 5] gi|209532892|gb|ACI52829.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl 5] Length = 291 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 11/270 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62 +L +++ + + G + FLQ +++ DV + A +A LTPQGK +FL ++ + Sbjct: 22 AFLPDRAVLAISGADRVSFLQGLVSNDVAAVAPGQAVWTAFLTPQGKWQADFFLFAEADG 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFS 121 + +L+ + ++ D L +L Y+LRS+V I+ P V +W +S+ Sbjct: 82 ERLLLDCEAAQADMLRQRLARYRLRSDVSID--PTGFAVHAAWGAVPPMLDSAIGAPDPR 139 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 +A+ A+D Y R+ G+ D + D +A + LNGIS T Sbjct: 140 LAEAGWRLILPRPTPDAADHAAYDAHRLALGLPDGSRDCEEGKTLLLEANFEALNGISWT 199 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQE+ +R ++R ++R++ + ++G LPP G+P++ + E G + + LA+ Sbjct: 200 KGCYMGQELTARTRYRGLVRRKLLPVSGA-ALPPPGTPLMHGEKEAGIMASSRDGRGLAM 258 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 R+D + LT G V+ P W Sbjct: 259 LRLD------HRSAELTAEGHSVQVHIPSW 282 >gi|294084896|ref|YP_003551656.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664471|gb|ADE39572.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 339 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 25/287 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++ + FI + G A+ FLQ+IITA+V TL R A+LTPQG++L+ F+I + +D Sbjct: 47 AHMPDMGFIAIAGIEAVDFLQSIITANVETLDSGAMRQGALLTPQGRVLIDFMIYRTSQD 106 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFS 121 +L+ + ++RD L +L Y+LR V IE + + WN + ++ F D R Sbjct: 107 ELLLQCEANRRDDLYTRLRRYRLRRPVTIETRDDLACYVWWNLDIVPASMPHLFADRRDG 166 Query: 122 IADVLLHRTWGHN-EKIASD-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 L +R G++ + + SD I +H +RI I D P ++ +D Sbjct: 167 ---ALGYRYLGNDAQTVLSDHGATSGTIDEWHAIRIAKAIPQGALDLTPERALMLESGLD 223 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIG--- 228 L+ + KGCYIGQEV +R +R ++++R P +I D +P + I+ DD IG Sbjct: 224 HLDAVDFGKGCYIGQEVTARTHYRGLVKRRLAPFMI---DAMPEPSADIMLDDAVIGRCK 280 Query: 229 TLGVVVGKKALAIARIDKVD-HAIK---KGMALTVHGVRVKASFPHW 271 ++ + G A+ + + D H ++ + +LT+ + + P W Sbjct: 281 SIAPLPGGGAITLGLVKLSDLHMLQDSGQNPSLTIDSHVAQLALPDW 327 >gi|119383483|ref|YP_914539.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus denitrificans PD1222] gi|119373250|gb|ABL68843.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus denitrificans PD1222] Length = 238 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 17/249 (6%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + V G+ + FLQ ++T V P +A+LTPQGK L FLI + + +++ Sbjct: 2 RRILAVSGEDRVEFLQGLVTNKVGPEPCW----AALLTPQGKYLADFLIVP-DGERLLVD 56 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D L+ +L YKLRS V +E P + V + +D R D L Sbjct: 57 VDARLEGDLMRRLSMYKLRSKVALE--PTDLTVARGT--GPAPEGAIMDPRH---DALGW 109 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G SD + +R+ H I + + +P+ F +A + L+G+ KGCY+GQ Sbjct: 110 RLYGGEGDDGSD---WDAIRVAHCIPETLVELIPNETFILEAGFERLHGVDFRKGCYVGQ 166 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAIARIDKV 247 EV +R++H+ +RK ++ G + P G+PIL D E+GTL G +A+A R D++ Sbjct: 167 EVTARMKHKTELRK-GLVTVGIEGAAPVGTPILMADGREVGTLFTQSGDRAIAYMRFDRM 225 Query: 248 DHAIKKGMA 256 + G A Sbjct: 226 GEGLVAGDA 234 >gi|83945377|ref|ZP_00957725.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis alexandrii HTCC2633] gi|83851211|gb|EAP89068.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis alexandrii HTCC2633] Length = 298 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 12/271 (4%) Query: 1 MSSVYLS---NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 M+ YL+ +++ I + G A FLQ ++T + A SA+LTPQGK+L I Sbjct: 24 MTEPYLTTLPDRAVIAITGAEARGFLQRVLTQGPEGVKPGAAMFSALLTPQGKVLADLFI 83 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----HTFSNS 113 E + ++ S+ D+L+ + Y++R++ IE + V+ + + + S Sbjct: 84 LDDGEGGLLFDVPASEADALLKRFTLYRMRADATIERREDLSVIAAAGEPAEELRMVALS 143 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + D R + + R SD Y RI G + +D+ P+ +F D D Sbjct: 144 AAPDPRNA---AIGWRGVAPAGGPDSDRDLYERARIQAGAPELGSDYGPAEVFSTDVNHD 200 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 LL+GI+ KGC++GQEV SR+ + +RKR + + G D + + + +G + V Sbjct: 201 LLSGINYKKGCFVGQEVASRMHRKGGVRKRSVRLQG--DGLKTQDEVKVGETVLGPVSSV 258 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G ALA RID++ ++ G L V+G V Sbjct: 259 SGDHALARLRIDRLKDGLQAGDTLKVNGAPV 289 >gi|167648315|ref|YP_001685978.1| folate-binding protein YgfZ [Caulobacter sp. K31] gi|167350745|gb|ABZ73480.1| folate-binding protein YgfZ [Caulobacter sp. K31] Length = 293 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 29/289 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L +++ I V G FL ++T +V TL R + +LTPQG+ LL+ L D Sbjct: 10 AHLDSRAVIAVSGPDWKSFLNGLLTQEVETLAPGELRFAGLLTPQGR-LLHDLFVAGATD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSSFIDE 118 +L++ RD+++ +L Y+LR+ V + P++ + S DE Sbjct: 69 GALLDVAADHRDAILARLTMYRLRAKVELAASPLDVFSQFSALPGEGPGPDPEAGSAPDE 128 Query: 119 RFS-----------IADVLL----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 S AD L R + + + + Y R+ G+ P D+ Sbjct: 129 SGSRPSPGRADHGWFADPRLPSLGARAYAQDLPVTASEDDYDAHRLAQGVPGP-ADWGTD 187 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILT 222 +P +A DLLNGI KGC++GQE SR++ R I+ R M+ D PP+ G+ +L Sbjct: 188 RTYPIEANFDLLNGIDFKKGCFVGQETTSRMKRRGTIKTR-MLPIAFDGPPPAFGTEVLA 246 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ++ G + +A+A+ R+D+V +G ALTV G V P W Sbjct: 247 GELRAGEVLSGRDGRAMALLRLDRV-----EGAALTVDGRPVSVERPDW 290 >gi|195445833|ref|XP_002070506.1| GK10994 [Drosophila willistoni] gi|194166591|gb|EDW81492.1| GK10994 [Drosophila willistoni] Length = 353 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 131/301 (43%), Gaps = 40/301 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62 L N+ I+V G +PFLQ ++T DV L + S L G++L +I + Sbjct: 45 LKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIYRTNN 104 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVII-----EIQPI-----NG-----VVLSWNQ 106 +T++LE DR L +++R + I E P NG V + N Sbjct: 105 PETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHATHNL 164 Query: 107 EHTFSNS-----SFIDERFSIADV----LLHRTWGHNEKIASDI---KTYHELRINHGIV 154 F S S + D+ L+ W +NE +A+ Y LR G+ Sbjct: 165 PELFVASDPRLPSLGTRVLAPTDISWAKLVKGFWQNNEVVATPATADNNYQLLRYKQGVG 224 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T Sbjct: 225 EGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT---A 281 Query: 215 PSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 P GS + LG V G + +A+ RI++V + LTV G R A P W Sbjct: 282 PLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPEW 338 Query: 272 Y 272 + Sbjct: 339 W 339 >gi|315498153|ref|YP_004086957.1| folate-binding protein ygfz [Asticcacaulis excentricus CB 48] gi|315416165|gb|ADU12806.1| folate-binding protein YgfZ [Asticcacaulis excentricus CB 48] Length = 269 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 126/277 (45%), Gaps = 31/277 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-------SAILTPQGKILLYFL 56 + L +++ I + G FL + D+ + +A G A LTPQGK+ Sbjct: 5 IALPHRALIALSGPDWGKFLNGQTSIDLENIFDAVAAGENRHLYYGAFLTPQGKLSADVF 64 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 I + DT +++D RD L +L +KLR+ V + +P V S+++ Sbjct: 65 ICPRDSDTVWIDVDAGVRDELFTRLNMFKLRAKVTLS-KPEAKVYASFSE-------GLP 116 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D R L+R +G E + TY E R+ G+ +P DF ++P D MDL+ Sbjct: 117 DPRAPG----LYRAYGTFEAMGG-FTTYTEFRLTQGVAEPGLDFPKDYLYPIDINMDLIA 171 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 I KGC++GQE SR++ R I+ R P+ GT GS +L + G + Sbjct: 172 AIDFKKGCFVGQETTSRMKRRGTIKNRLIPLSHNGTFAF---GSEVLLGERRAGEILASA 228 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 K+LA+ R+D++D LT G V + P W Sbjct: 229 NGKSLALMRLDRLDG------DLTCAGDAVTLAVPDW 259 >gi|195453713|ref|XP_002073908.1| GK12899 [Drosophila willistoni] gi|194169993|gb|EDW84894.1| GK12899 [Drosophila willistoni] Length = 353 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 127/301 (42%), Gaps = 40/301 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62 L N+ I+V G +PFLQ ++T DV L + S L G++L +I + Sbjct: 45 LKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIYRTNN 104 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVII-----EIQPINGVVLSWNQEHTFSNSSFI 116 +T++LE DR L +++R + I E P + + + Sbjct: 105 PETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHATHNL 164 Query: 117 DERFSIADV-------------------LLHRTWGHNEKIASDI---KTYHELRINHGIV 154 E F AD L+ W ++E +A+ Y LR G+ Sbjct: 165 PELFVAADPRLSSLGTRVLAPTDISWAKLVKGFWQNSEVVATPATADNNYQLLRYKQGVG 224 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T Sbjct: 225 EGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT---A 281 Query: 215 PSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 P GS + LG V G + +A+ RI++V + LTV G R A P W Sbjct: 282 PLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPEW 338 Query: 272 Y 272 + Sbjct: 339 W 339 >gi|144898986|emb|CAM75850.1| Glycine cleavage T protein (aminomethyl transferase) [Magnetospirillum gryphiswaldense MSR-1] Length = 274 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++ + V G FLQ +I+ DV + A +A LTPQGK L +++ + DT +++ Sbjct: 11 RTVLNVAGDDRKTFLQGLISNDVAKIAPGQALWAAFLTPQGKFLWDLFLTE-QGDTVLID 69 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D + ++ KL YKLRS V I + V + + D R L+ Sbjct: 70 VDAATAEAFRKKLSLYKLRSKVTITTTDL-AVFAVFGGDGALPEGVAADTRLPAMGGRLY 128 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 + + + + R G+ D D + + D L+G+ KGCY+GQ Sbjct: 129 ASQPPADMAEVPLAAWDAWRFAQGVPDGARDLIVDKSLLLENGFDELSGVDFNKGCYMGQ 188 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 E+ +R ++R ++RKR + ++ P G+P+L ++E G + LA+ R++ Sbjct: 189 ELTARTKYRGLVRKRLLPVSFDGAAPEVGTPVLVGEVEAGKMRSGGDGAGLAMIRLEH-- 246 Query: 249 HAIKKGMALTVHGVRVKASFPHW 271 ++ G LT G + + P W Sbjct: 247 --LRAGTPLTCGGKALAVTVPAW 267 >gi|190570501|ref|YP_001974859.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019260|ref|ZP_03335067.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356773|emb|CAQ54134.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995369|gb|EEB56010.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 265 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 34/282 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L+N+S I + G FLQ +IT D+ L + A S +L PQGK L F + I Sbjct: 1 MGYIPLANRSLISLYGPDTRDFLQGVITNDINKLSSQQAIYSLLLNPQGKYLYDFFL--I 58 Query: 61 EEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS 114 E D +I LE + + +I+KL L++ + + I+ I+ GV+ S S Sbjct: 59 EHDKYIYLECENAHLQQIIEKLDL--LKTYLRVRIKDISSLYKVGVLFDAKLAKCSSKSQ 116 Query: 115 --FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTI 165 F D R H+ G H ++I D Y ++RI + + D D + ++ Sbjct: 117 VIFQDPR--------HKLLGMRIIHEDEIKEPVGDFIQYEKVRIKNLVPDGAKDMVQNSS 168 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-D 224 FP L+D +NGIS KGCYIGQEVV+R+ + R++ ++ G + LP G+ ++++ + Sbjct: 169 FPLQYLIDKINGISFNKGCYIGQEVVNRMSRQEKFRRKLYLVEGKNALPNIGTKVISEHN 228 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 E+G L V LA+ K HA L V GV +K Sbjct: 229 EEVGELRSSVDNIGLALLNTGK-SHA-----NLYVGGVSIKT 264 >gi|149203599|ref|ZP_01880568.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] gi|149142716|gb|EDM30758.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] Length = 248 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 14/250 (5%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + +++ GK A+ FLQ ++T D+ L + + +AILTPQGK L FL+S+ +D L Sbjct: 2 TRRILEITGKDALQFLQGLVTNDLQKLDHGLVY-AAILTPQGKYLADFLLSR-HDDAIRL 59 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 ++D S L+ +L YKLR++V I+ + + +D R AD L Sbjct: 60 DVDASLAPMLLQRLTMYKLRADVTIKETDLK----VRRGTGPAPLGALVDPRH--AD-LG 112 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+G Sbjct: 113 WRLYG--ETGGDDGSDFDRIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVG 169 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDK 246 QEV +R++H+ +RK + + P GS I T + + GTL G + +A R+D+ Sbjct: 170 QEVTARMKHKTELRK-GLTLVAVHGAAPIGSEIFTPEGKAAGTLYTQSGGRGIAYLRLDR 228 Query: 247 VDHAIKKGMA 256 + G A Sbjct: 229 AAAGMTSGEA 238 >gi|163793647|ref|ZP_02187622.1| Glycine cleavage T protein (aminomethyl transferase) [alpha proteobacterium BAL199] gi|159181449|gb|EDP65964.1| Glycine cleavage T protein (aminomethyl transferase) [alpha proteobacterium BAL199] Length = 302 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 29/296 (9%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEED 63 +L ++ F+++ G + FLQ +++ DV + A A LT QGK L +F+++ + D Sbjct: 8 FLQSRGFLRIDGPDRVAFLQGLVSNDVTKVTTDRAGYGAFLTAQGKFLFDFFMVA--DGD 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN-----------VIIEIQPINGVVLSWNQ--EHTF 110 +L+ + + D +L YKLRS V++ + + + L ++ F Sbjct: 66 ALVLDTEGDRVDDFFKRLRMYKLRSKIELSQGGYRAAVVLGEEALAALGLPADRGVATPF 125 Query: 111 SNS-SFIDERFS--IADVLLHRTWGHN-----EKIASDIKTYHELRINHGIVDPNTDFLP 162 +++D R + A VLL + A+ ++ Y R+ G+ D + D Sbjct: 126 GGGVAYVDPRHAEMGARVLLPASADDGVLSVAGPSAASLEPYDRQRVALGLADGSRDMAI 185 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 +A + L G+ KGCY+GQE+ +R ++R ++++R + IT LP G+ I Sbjct: 186 EKTVLLEAGFEELGGVDFDKGCYMGQELTARTKYRGLVKRRLLPITINGPLPAPGTLITL 245 Query: 223 DDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 D E G + V V LA+ R+++++ A + GM L V AS P W K Sbjct: 246 DGREAGEVRSVIPNGDVNGTGLAMIRLNRLEEAFQAGMPLMAGESTVIASRPAWAK 301 >gi|224044548|ref|XP_002192875.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 320 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 130/297 (43%), Gaps = 31/297 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-------ILTPQGKILL- 53 ++ + ++ + V G A FLQ ++T DV L +A G A L QG+ L Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRL---LAEGDAPRALYAHALNAQGRCLYD 79 Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------INGVVLSWNQ 106 L S EE +LE D S DS+ L YK+R V I P + G S + Sbjct: 80 VILYSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLPK 139 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDF 160 + D R + L G N D++ YH R GI + D Sbjct: 140 CADQALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQGIPEGVKDL 199 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PS 216 P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + ++ + LP P Sbjct: 200 PPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLLPVSFPEPLPAAGLPE 259 Query: 217 GSPILT-DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ ILT GT G+ +A+ R+ + + + L H V++ A+ P W+ Sbjct: 260 GAEILTAAGKRAGTFRAGGGELGIALLRLAHLGEPLC--IPLGAHRVKLHAATPQWW 314 >gi|254512369|ref|ZP_05124436.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] gi|221536080|gb|EEE39068.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] Length = 245 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 130/256 (50%), Gaps = 20/256 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + N+ +++ GK FLQ +IT D+ L + +A+LTPQGK L F + K + Sbjct: 1 MPNRRILRLTGKDTDSFLQGLITNDIERLADGLVY-AALLTPQGKYLADFFL-KRDGKGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFSIA 123 +L++D + D LI +L YKLR++V IE +N Q T + + D R S Sbjct: 59 LLDVDEALADGLIKRLTMYKLRADVTIEATDLN------LQRGTGAAPEGALPDPRHS-- 110 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 D+ G E + D + +R+ I + + P + + ++ D LNG+ KG Sbjct: 111 DLGWRAYSGAPE--SDDGSDWDAIRVRLCIPETGIELTPDS-YILESGFDALNGLDFKKG 167 Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 CY+GQEV +R++H+ +RK R + +TG+ P G+ IL+ +G L G +A+A Sbjct: 168 CYVGQEVTARMKHKTELRKGLRVVEVTGS---APVGTEILSGGKPVGILFTQSGNRAIAY 224 Query: 242 ARIDKVDHAIKKGMAL 257 R D+ ++ G A+ Sbjct: 225 LRFDRAGGDMQAGDAV 240 >gi|195054166|ref|XP_001993997.1| GH18001 [Drosophila grimshawi] gi|193895867|gb|EDV94733.1| GH18001 [Drosophila grimshawi] Length = 354 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKILLYFLISKI 60 L + I+V G PFLQ ++T DV L P I S L G+++ +I + Sbjct: 41 LPQRELIRVHGAEVTPFLQGLVTQDVSRLQEPSGPASIY--SLFLNRAGRLMFDTIIYRT 98 Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTF 110 ++DT+++E DR L Y++R + I+I ++ + W + E Sbjct: 99 NDKDTYLVECDRDASSDFRRHLRTYRVRKH--IDIDTVDDEYVPWVLFNDGQQKDTEARM 156 Query: 111 SNSS------FI--DERFS-----------IADVLLHRT-WGHNEKIA--SDI-KTYHEL 147 ++S FI D R ++D L T W ++E IA DI K Y L Sbjct: 157 ASSKQKAKDLFIASDPRIGSLGIRILAPSDMSDAQLATTLWRNHEVIAVNPDIEKNYKLL 216 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I Sbjct: 217 RYKQGIGEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPI 276 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRV 264 T P S + + +LG V+G +A+ RI+ V + L + G R Sbjct: 277 RFT---APIRSDMTVKSVSGASLGRVLGHAQNHGVALLRIEPV---LNSAQQLVLDGDRC 330 Query: 265 KASFPHWY 272 A PHW+ Sbjct: 331 FAERPHWW 338 >gi|157803675|ref|YP_001492224.1| glycine cleavage T-protein [Rickettsia canadensis str. McKiel] gi|157784938|gb|ABV73439.1| Glycine cleavage T-protein [Rickettsia canadensis str. McKiel] Length = 276 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 19/279 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ IK+ G ++ FLQ ++T D+ Y + +L +GK L F + + Sbjct: 5 LSDREVIKIIGLDSVKFLQNLVTNDIKKSKYCY---TYLLNNKGKYLFDFFVYIHNFEEL 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERF---- 120 L+ID+S + +LID L FYK RS + II+ V+ S + + + D R+ Sbjct: 62 YLDIDKSNKATLIDHLNFYKFRSKIQIIDCHDKYKVIYSHQKLDIDTLVTSRDPRYTKLG 121 Query: 121 --SIADVLLHRTWG---HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 SI + L T H+ + + I Y E + N I+D D + P + L Sbjct: 122 FRSIVNRTLKDTLDPLCHSREDKNPI--YLEDKYNFAIIDGVEDLSFNKSIPILYGGEEL 179 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVV 233 NGIS KGCY+GQEV+SR +++ IIR++ + +DL IL D+ IG + Sbjct: 180 NGISYYKGCYVGQEVISRAKYQGIIRRKIYKVIADEDLSSLVKDEEILADNDTIGIICSS 239 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 KA+A+ R++K + K +++V G+ ++ S WY Sbjct: 240 YHNKAIALIRVEK--YLAVKESSISVKGISIELSLAPWY 276 >gi|297717822|gb|ADI50054.1| folate-dependent protein [Candidatus Odyssella thessalonicensis L13] Length = 293 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 37/298 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S+ LS+++ ++V G FLQ +I+ DV L ++A + +L+PQG+ + LI + Sbjct: 3 LSACLLSHRALVRVTGNDKATFLQGLISNDVNKLSPEVALFALLLSPQGRYQ-FDLILHL 61 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------- 107 E + ++LE+D ++ SLI +L ++LRSNV E+ ++ W +E Sbjct: 62 EGEDWLLEVDAARALSLIKRLSVFRLRSNVTFEVVEDRAILAVWGEEVASCLSLEGGLGE 121 Query: 108 --HTFSNSSFIDERF-SIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157 T ++ +D R ++ L+ R+ E+I + Y R GI + Sbjct: 122 TQATSWGTAVLDPRLIALGARLIIRS-EDVEQICHQYGIKLCSVSDYRYHRYQLGIPEGG 180 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 + P + MD LN I KGCY+GQE+ +R ++R ++RKR P+ G Sbjct: 181 EEIEVDRAIPLEWGMDELNAIDWNKGCYMGQELTARTRYRGLVRKRIFPVYAPGI----T 236 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 PIL + E+G LA+ R++ +D LT G + P W K Sbjct: 237 LEQPILAAETEVGHWIAKEQDWGLAMVRLNAID------AQLTCDGQVLTIICPSWMK 288 >gi|254463496|ref|ZP_05076912.1| glycine cleavage system T protein, aminomethyltransferase [Rhodobacterales bacterium HTCC2083] gi|206680085|gb|EDZ44572.1| glycine cleavage system T protein, aminomethyltransferase [Rhodobacteraceae bacterium HTCC2083] Length = 247 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 37/261 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK-ILLYFLISKIEE 62 ++ + ++V G A FLQ ++T DV L + +A+LTPQGK I +FL+ + Sbjct: 2 IHPETRRLLRVTGADARAFLQGLLTNDVQKLDQGLVY-TAMLTPQGKYIADFFLVP--DG 58 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------NSSF 115 D +L+ D S+ D+L +L YKLR++V I + + + S +F Sbjct: 59 DAILLDTDASQTDALAKRLTMYKLRADVTIA-----------DDKRSVSRGLGPIPEGAF 107 Query: 116 IDERFSIADVLLHRTW-GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 +D R L W G++ +IA D+ + L + H + + P + F + + Sbjct: 108 VDPR------LAALGWRGYDGQIAQDVD-WTALNVTHSVPRAGIELTPDS-FLLEMGFER 159 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTD-DIEIGTLG 231 LNG+ KGCY+GQEV +R++H+ +RK + ITG+ P G+ I T+ D GTL Sbjct: 160 LNGVDFKKGCYVGQEVTARMKHKTQLRKGLAQVSITGS---APIGTDITTEADKVAGTLF 216 Query: 232 VVVGKKALAIARIDKVDHAIK 252 G KALA R D+ +K Sbjct: 217 SQSGDKALAYVRFDRATGPLK 237 >gi|330994708|ref|ZP_08318631.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp. SXCC-1] gi|329758349|gb|EGG74870.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 12/273 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62 +L +++ + V G + FLQ +++ D+ T+ A +A L+ QGK L +F+++ E Sbjct: 5 AHLPDRAVLAVSGADRVSFLQGLVSNDMTTVAPGHAVWTAFLSAQGKWLADFFVLADPEG 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +++ DR++ D L +L Y+LR+ V I + V +W T + Sbjct: 65 VRLLVDCDRAQADMLRQRLSRYRLRAQVEIG-ETGYAVHAAWGSGFTPPAGYPAAPDPRL 123 Query: 123 ADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 D GH AS D Y R+ G+ D D +A D LNGIS T Sbjct: 124 PDAGWRVLLGHPAPDASADDVDYDRHRLALGLPDGARDCESDRTLLLEANFDQLNGISWT 183 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQE+ +R ++R ++R+ + + +LP G+P+++ D +G + +A+ Sbjct: 184 KGCYMGQELTARTRYRGLVRRHLLPVMAGRELPTPGTPVMSGDTAVGEMRSSRDSAGMAM 243 Query: 242 ARIDKVDHA--IKKGMALTVHGVRVKASFPHWY 272 R + + + G AL V P W+ Sbjct: 244 IRNEHIHDTDLVAGGHALHVR-------VPQWF 269 >gi|83950541|ref|ZP_00959274.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] gi|83838440|gb|EAP77736.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] Length = 243 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 27/253 (10%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTFILEID 70 I + GK A FLQ ++T D+ L + +A+LTPQGK + +FL+++ E T L+ D Sbjct: 6 IDISGKDARSFLQGLVTNDLGKLDQGLVY-AALLTPQGKYMADFFLLARGE--TIHLDAD 62 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD----VL 126 S D L+ +L Y+LR++V + + S + ++AD L Sbjct: 63 ASLGDMLMQRLAMYRLRADVQLSESALK-----------LSRGTGPAPEGALADPRHPAL 111 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 R +G + D + +R+ H I + ++ P T + +A + LNG+ KGCY+ Sbjct: 112 GWRLYGAQD--GEDGSDFDAIRVAHCIPETGSELGPET-YILEAGFERLNGVDFRKGCYV 168 Query: 187 GQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 GQEV +R++H+ +RK R + I G P G+ I + +GTL G +A+A R Sbjct: 169 GQEVTARMKHKTELRKGFRTVEIEGA---APLGTEITAEGKPVGTLHTQAGSQAIAYLRF 225 Query: 245 DKVDHAIKKGMAL 257 D+ ++ G A+ Sbjct: 226 DRARGDMQAGDAI 238 >gi|301787921|ref|XP_002929380.1| PREDICTED: putative transferase C1orf69, mitochondrial-like, partial [Ailuropoda melanoleuca] Length = 319 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 41/304 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGK---- 50 L ++ ++V G ++PFL ++T + LP + A+ +P QG+ Sbjct: 15 LGERALVRVRGPDSVPFLLGLLTNE---LPLPASAAGAVSSPALAGYAHFLNVQGRTLYD 71 Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHT 109 +LLY L E F+LE DR+ +L L YK+R V +E +P + L Sbjct: 72 VLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPEE 131 Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153 ++ + E+ A +L R +E +A D++ YH R HG+ Sbjct: 132 GGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHGV 191 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + L Sbjct: 192 PEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGPL 251 Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P G+ +LT+ + G G LA+ R +K+ + + + + + AS Sbjct: 252 PAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTSESGQ-LALTASV 310 Query: 269 PHWY 272 P W+ Sbjct: 311 PDWW 314 >gi|281340181|gb|EFB15765.1| hypothetical protein PANDA_019539 [Ailuropoda melanoleuca] Length = 317 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 41/304 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGK---- 50 L ++ ++V G ++PFL ++T + LP + A+ +P QG+ Sbjct: 13 LGERALVRVRGPDSVPFLLGLLTNE---LPLPASAAGAVSSPALAGYAHFLNVQGRTLYD 69 Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHT 109 +LLY L E F+LE DR+ +L L YK+R V +E +P + L Sbjct: 70 VLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPEE 129 Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153 ++ + E+ A +L R +E +A D++ YH R HG+ Sbjct: 130 GGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHGV 189 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + L Sbjct: 190 PEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGPL 249 Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P G+ +LT+ + G G LA+ R +K+ + + + + + AS Sbjct: 250 PAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTSESGQ-LALTASV 308 Query: 269 PHWY 272 P W+ Sbjct: 309 PDWW 312 >gi|254476830|ref|ZP_05090216.1| aminomethyl transferase family protein [Ruegeria sp. R11] gi|214031073|gb|EEB71908.1| aminomethyl transferase family protein [Ruegeria sp. R11] Length = 246 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 25/257 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 ++ + +++ G A FLQ +IT DV K+ +G +A+LTPQGK L F + E Sbjct: 1 MTTRRILRLTGSDARDFLQGLITNDVA----KVDQGLVYAALLTPQGKYLADFFVF-AEG 55 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDER 119 D ++++D S SL +L Y+LR++V I ++Q G + + +D R Sbjct: 56 DDLLIDVDESLAASLAKRLSMYRLRADVQISDTDLQVKRGTGPA-------PEGALMDPR 108 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 D L R +G + D + +R+ H I + P + + +A + LNG+ Sbjct: 109 H---DALGWRLYG--TEGGDDGSNWDAIRVAHCIPQTGIELGPDS-YILEAGFERLNGVD 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK ++ PSGS I + +GTL G + Sbjct: 163 FRKGCYVGQEVTARMKHKTELRK-GLVTVAVSGSAPSGSEIRRAEKPVGTLFTTEGAHGI 221 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ ++ G A Sbjct: 222 AYLRYDRAGDDMQAGEA 238 >gi|157825884|ref|YP_001493604.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford] gi|157799842|gb|ABV75096.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford] Length = 308 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 47/309 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT D+ Y + +LT QG+ L F + + Sbjct: 5 LSNREIIKIIGLDSVKFLQNLITNDIKKSQYCY---TYLLTNQGRYLFDFFVYVRNLEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122 L+ID+S + +LI+ L FYKLRS + II+ V+ S + + + D R+S+ Sbjct: 62 YLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLG 121 Query: 123 ------ADVLLHRTWGHNEKIASD-------------------------------IKTYH 145 V+ +G + I D Y Sbjct: 122 FRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLYL 181 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++ Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241 Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 IT +DL IL +IG + KA+ + R +K + K +TV G++ Sbjct: 242 KITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEK--YFACKEADITVKGIK 299 Query: 264 VKASFPHWY 272 + S WY Sbjct: 300 INLSLAPWY 308 >gi|163737689|ref|ZP_02145106.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter gallaeciensis BS107] gi|161389215|gb|EDQ13567.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter gallaeciensis BS107] Length = 246 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 19/245 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 +SN+ +++ G FLQ +IT DV K+ +G +A+LTPQGK L F ++ E Sbjct: 1 MSNRRILRLSGDDTRDFLQGLITNDVT----KVDQGLVYAAMLTPQGKYLADFFVA-AEG 55 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D ++++D S SL +L Y+LR+ V IE + + D R Sbjct: 56 DDLLVDVDESLAPSLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD 111 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L R +G + D ++ +R+ H I + + P + + +A + LNG+ K Sbjct: 112 ---LGWRMYGA--QPGDDGSDWNAIRVAHCIPETGIELGPDS-YILEAGFERLNGVDFRK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQEV +R++H+ +RK +T + P G+ I D +GTL G +A+A Sbjct: 166 GCYVGQEVTARMKHKTTLRKGLATVT-VEGEAPIGTEIRRADKPVGTLFTQAGDQAIAYL 224 Query: 243 RIDKV 247 R D+ Sbjct: 225 RFDRA 229 >gi|195144438|ref|XP_002013203.1| GL23521 [Drosophila persimilis] gi|194102146|gb|EDW24189.1| GL23521 [Drosophila persimilis] Length = 340 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 40/299 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62 L+++ I+V G +PFLQ ++T DV L S L G++L ++ + E Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYAMFLNKGGRVLYDTIVYRTES 95 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 DT++LE DR + L +++R I++ I+ + W +T + E+ Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYVPWVLFNTEKCGEQVGEKLQ 153 Query: 122 ----------------------IADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDP 156 +A + E I S + Y LR G+ + Sbjct: 154 RNKEWELFISSDPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSERNYQLLRYKQGVGEG 213 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T P Sbjct: 214 SEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT---APL 270 Query: 217 GSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ I LG V G +A+ RI++V + L V G R A P W+ Sbjct: 271 GANQTVQSIAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELVVDGERCFAERPDWW 326 >gi|58040450|ref|YP_192414.1| aminomethyltransferase [Gluconobacter oxydans 621H] gi|58002864|gb|AAW61758.1| Aminomethyltransferase [Gluconobacter oxydans 621H] Length = 281 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 25/277 (9%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 YLS+++ + G FLQ +IT DV L A SA+LTPQG+ L F + D Sbjct: 15 YLSHRAVLSFTGTDRASFLQGLITNDVQNLTDTTAVWSALLTPQGRWLSEFFLYATP-DR 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFIDERFS 121 +++ + L+ +L ++LR++V IE P V++ + + S +D R Sbjct: 74 ILMDCPADHAEMLVKRLSRFRLRADVQIENTPFQ--VITGAEGRAVPETVLTSALDPRCE 131 Query: 122 IAD---VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 V+ G A + E R+ G+ D DF +A MDLL+G+ Sbjct: 132 GTGWRAVVTEPAQGGETPAA-----FLERRLTLGLPD-VMDFESEQTLALEADMDLLHGV 185 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG 235 S KGCY+GQE+ +R +R ++++R P++++ GT P G I++ + E+G + G Sbjct: 186 SWKKGCYMGQELTARTHYRGLVKRRLLPVVLSEGT--FPNEGGVIVSGEREVGDIRSRSG 243 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +ALA+ R D + LT +G + +P W+ Sbjct: 244 NRALAMLRRDAWSAS-----DLTCNGQPLSVVWPVWF 275 >gi|254439032|ref|ZP_05052526.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] gi|198254478|gb|EDY78792.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] Length = 247 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 21/255 (8%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDT 64 N++ I++ G + FLQ +IT DV K + G +A+LTPQGK + F ++ ++ Sbjct: 3 NRTLIRLSGPDTVEFLQGLITNDVA----KTSGGLVYAALLTPQGKYIADFFVTA-QDGA 57 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++++ S L +L Y+LRS+V I P+ L T NS+ D R + Sbjct: 58 LLIDVATSHAAMLAQRLTMYRLRSDVQIAEAPL----LVSRGTGTAPNSALPDPRHA--- 110 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R ++ SD + LR+ H I + + P T + +A + LNG+ KGC Sbjct: 111 ALGWRLIAATDQ--SDDTDWDALRVAHVIPETGIELTPET-YILEAGFERLNGVDFRKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVVGKKALAI 241 Y+GQE+ +R++H+ ++K ++ + P P G+ I T+ GTL G ALA Sbjct: 168 YVGQEIAARMKHKTELKKGLAQVSISGVAPAKFPMGTEITTNGRPAGTLYTQSGGLALAH 227 Query: 242 ARIDKVDHAIKKGMA 256 R D+ ++ G A Sbjct: 228 LRFDRATGDMQAGGA 242 >gi|51473652|ref|YP_067409.1| hypothetical protein RT0451 [Rickettsia typhi str. Wilmington] gi|51459964|gb|AAU03927.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 286 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 25/287 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT D+ Y + +L QG+ L F + ++ Sbjct: 5 LSNRKIIKIIGLDSLMFLQKLITNDICNKRYCY---TYLLNNQGRYLFDFFVYVHHKEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERF---- 120 ++ID+S + +LI L FYKLRS + II+ V+ S + + D R+ Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHQKLDIDMLITVRDPRYAKLG 121 Query: 121 --SIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPSTIFP 167 SI + + +N K I + Y E + N I+D D + + P Sbjct: 122 FRSINKLDIITCTSNNVKDMESISSITSYRQSMNPIYLEDKYNFAIIDGIEDLITNKSIP 181 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDI 225 + + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL ++ Sbjct: 182 NMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKIYRITAYEDLLSLVQDDVILANNE 241 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +IG + K +A+ ++K H K +TV G+++ S WY Sbjct: 242 KIGVICSSYQNKGIALI-MEKKYHDY-KTYNITVKGIKINLSLAPWY 286 >gi|262277435|ref|ZP_06055228.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114] gi|262224538|gb|EEY74997.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114] Length = 273 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 11/270 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + N+ I + G + FL IIT DV + + S +L+PQGK++ +F ISKI ++ F Sbjct: 9 IENKRVISITGDESETFLNNIITNDVKKINSNNSIYSCLLSPQGKVISHFFISKI-DNKF 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIAD 124 ++ +D D LI+KL FYKLRS V I+ + + V+ + ++ F++ F D R I + Sbjct: 68 LIIVDDYLSDDLIEKLNFYKLRSQVDIKDENLYNVIFTTDENFKFNSILDFEDPR--IPN 125 Query: 125 VLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + N+ + D + Y++L +G++D + + F + M LN I + Sbjct: 126 FGKYFISKKNDNLGINLEDSEKYYKLINLNGLIDSIFNQIQGQYFSLELNMQELNAIDFS 185 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQE +R+ + I K+ + L SG I + IG +V A+ Sbjct: 186 KGCYVGQENTARMSLKEKISKKLFRLNSESKL-SSGEEIFFNKEIIGK--IVSENPNFAM 242 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ++ K + K + T ++VK S P+W Sbjct: 243 IKMLKFNEFNDKDLK-TQDDIKVKISKPNW 271 >gi|241068687|ref|XP_002408509.1| glycine cleavage T protein, putative [Ixodes scapularis] gi|215492497|gb|EEC02138.1| glycine cleavage T protein, putative [Ixodes scapularis] Length = 256 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 9/244 (3%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT + Y + +L QG+ L F + + Sbjct: 10 LSNREVIKIIGLDSVKFLQNLITNYIKKNNYCY---TYLLNNQGRYLFDFFVYVPNLEEI 66 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++ Sbjct: 67 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTM-- 124 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R+ + + + K Y E + N I+D D + P+ + LN IS KGC Sbjct: 125 -LGFRSIYDGDPASFNEKLYLEDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGC 183 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIA 242 Y+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+A+ Sbjct: 184 YVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALI 243 Query: 243 RIDK 246 R +K Sbjct: 244 REEK 247 >gi|126739975|ref|ZP_01755665.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] gi|126718794|gb|EBA15506.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] Length = 246 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 13/242 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ +IT DV L + + +A+LTPQGK + F ++ E Sbjct: 1 MTARKILRLSGPDTRSFLQGLITNDVNKLDHGLVY-AALLTPQGKYIADFFLAPAGE-AV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++D S + L +L Y+LR+ V IE + V E + D R S Sbjct: 59 LLDVDESLAEGLAKRLSMYRLRAAVEIETTDLQ--VKRGTGEA--PEGALSDPRHSAMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L+ G + D ++ +R+ H I + + + P + + +A + LNG+ KGCY Sbjct: 115 RLYGDEGGD-----DGSNWNAIRVAHCIPETSIELGPDS-YILEAGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + T + PSGS I D +GTL +A+A R D Sbjct: 169 VGQEVTARMKHKTELRKGLVTVKVTGE-APSGSEIKRQDKAVGTLFTSADGQAIAYLRYD 227 Query: 246 KV 247 + Sbjct: 228 RA 229 >gi|195390113|ref|XP_002053713.1| GJ23197 [Drosophila virilis] gi|194151799|gb|EDW67233.1| GJ23197 [Drosophila virilis] Length = 344 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 37/298 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS--AILTPQGKILLY--FLISKIE 61 L + I+V G +PFLQ ++T DV L S A+ +G L+Y + + Sbjct: 39 LRQRELIRVHGAEVVPFLQGLVTNDVSRLQEANGPSSMYALFLNRGGRLMYDTIIYRTND 98 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFID- 117 DTF+LE DR L Y++R + I+ + + V+ + N +D Sbjct: 99 PDTFLLECDRDASSDFRRHLRMYRVRKRIDIDTVDDEYVPWVIFNENGRGDIRTHKAMDL 158 Query: 118 -------------ERFSIADV----LLHRTWGHNEKIA---SDIKTYHELRINHGIVDPN 157 + AD+ L W +++ +A + Y LR GI + Sbjct: 159 FIAPDPRVGSMGTRVLAPADLNSTKLSKDLWRNHDVVAINPTPDSNYKLLRYKQGIGEGI 218 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T P Sbjct: 219 EELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFT---APVS 275 Query: 218 SPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 S + LG V G +A+ RI+ V H ++ L + G R PHW+ Sbjct: 276 SNQTVKSVAGANLGRVFGHAHNHGVALLRIEPVLHGDQQ---LVLDGERCFVDRPHWW 330 >gi|195112764|ref|XP_002000942.1| GI10516 [Drosophila mojavensis] gi|193917536|gb|EDW16403.1| GI10516 [Drosophila mojavensis] Length = 344 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 125/300 (41%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLY--FLISKIE 61 L + I+V G +PFLQ ++T DV L P + A+ +G LLY + + Sbjct: 39 LHQRELIRVHGAEVVPFLQGLVTNDVSRLQEPSGPSSMYALFLNRGGRLLYDTIIYRTND 98 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSN 112 DTF+LE DR L Y++R I+I I+ + W N + Sbjct: 99 PDTFLLECDRDASSDFRRHLRTYRVRKR--IDIDTIDDEYVPWVLFNGKGRGNIRTHKAM 156 Query: 113 SSFI--DERFSI------------ADVLLHRTWGHNEKIASDI---KTYHELRINHGIVD 155 FI D R I A L W H++ +A + Y LR GI + Sbjct: 157 DLFIAPDPRIGIMGTRVLAPGDINATKLTKDLWCHHDVVAVNSTPENNYKLLRYKQGIGE 216 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T P Sbjct: 217 GVEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFT---AP 273 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + + LG V G +A+ R++ V + L + G R P W+ Sbjct: 274 VSNHFTVKSVAGANLGRVFGHAHNHGVALLRVEPV---LNSEQQLMLDGERCYVDRPSWW 330 >gi|114769319|ref|ZP_01446945.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] gi|114550236|gb|EAU53117.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] Length = 253 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 17/263 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + N+S +KV G + FLQ +IT DV ++ +A+L+P+GK L F I+ Sbjct: 1 MCPEIIKNRSILKVSGNDSENFLQGLITNDVSRAKTELIY-TALLSPKGKYLFDFFITS- 58 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFID 117 D ++++I + I +L YKLR++V IE I G+ S +F D Sbjct: 59 HSDGYLIDISSNNAYQFIQRLNLYKLRADVTIEQTDIKVGRGI-------GPISEQAFQD 111 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R +D L +R + + S I + ++R+ + I + + + + +A + L+G Sbjct: 112 PR---SDQLGYRIYNPTQTEDSSI-NWDQIRVENCIPETGIELIIDETYILEANFEKLSG 167 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ + K+ + D P G+ I+++D +G + Sbjct: 168 VDFRKGCYVGQEVTARMKHK-VELKKGFVKVQIDGSAPIGTDIISNDKVVGQIFTQSNGM 226 Query: 238 ALAIARIDKVDHAIKKGMALTVH 260 A+A R ++V + +K G A ++ Sbjct: 227 AIAYLRFNRVSNDMKAGTAKIIY 249 >gi|125775558|ref|XP_001358983.1| GA20785 [Drosophila pseudoobscura pseudoobscura] gi|54638724|gb|EAL28126.1| GA20785 [Drosophila pseudoobscura pseudoobscura] Length = 340 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 127/299 (42%), Gaps = 40/299 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62 L+++ I+V G +PFLQ ++T DV L S L G++L ++ + E Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYALFLNKGGRVLYDTIVYRTES 95 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSN-------------VIIEIQPIN---GVVLSWN 105 DT++LE DR + L +++R V+ Q G L N Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRKIDVDSIDDEYAPWVLFNTQKCGEKVGEKLQRN 155 Query: 106 QEHTFSNSSFIDERFS------IADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDP 156 +E + SS D R +A + E I S Y LR G+ + Sbjct: 156 KERKWFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSENNYQLLRYKQGVGEG 213 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T P Sbjct: 214 SEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT---APL 270 Query: 217 GSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ + LG V G +A+ RI++V + L V G R A P W+ Sbjct: 271 GANQTVQSLAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELMVDGERCFAERPDWW 326 >gi|15604328|ref|NP_220844.1| hypothetical protein RP464 [Rickettsia prowazekii str. Madrid E] gi|3861020|emb|CAA14920.1| unknown [Rickettsia prowazekii] gi|292572080|gb|ADE29995.1| Putative aminomethyltransferase GcvT-like protein [Rickettsia prowazekii Rp22] Length = 285 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 24/286 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N+ IK+ G ++ FLQ +IT D+ Y + +L QG+ L F + +++ Sbjct: 5 LINREIIKIIGLDSLIFLQKLITNDICKKRYCY---TYLLNNQGRYLFDFFVYVHKKEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123 ++ID+S + +LI L FYKLRS + II+ V+ S + + D R++ Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHKKLDIDMLITVRDPRYTKLG 121 Query: 124 -------DVLLHRTWGHNEKIASDIKTYH--------ELRINHGIVDPNTDFLPSTIFPH 168 D+ N + S I +Y E + N I+D D + P+ Sbjct: 122 FRSINKLDITCSSDNMANMESISSITSYCQSMNPIYLEDKYNFAIIDGIEDLITDKSIPN 181 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIE 226 + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL D+ + Sbjct: 182 MYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKVYRITANEDLLSLVQDDVILADNEK 241 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 IG + K +A+ ++K H K +TV G+++ S WY Sbjct: 242 IGVICSSYQNKGIALI-MEKKYHDY-KTYNITVKGIKINLSLAPWY 285 >gi|330814289|ref|YP_004358528.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Candidatus Pelagibacter sp. IMCC9063] gi|327487384|gb|AEA81789.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Candidatus Pelagibacter sp. IMCC9063] Length = 298 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 40/299 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +++L ++ I + G +PFLQ+II+ D+ + K + S +LTPQGK L F+I+K Sbjct: 6 AIHLEQKTVISINGSDVVPFLQSIISNDIQLVDEKTSIYSCLLTPQGKFLYDFIITKKSS 65 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D ++L+ ++ D I KL YKLRS + I V L +N + S F +I Sbjct: 66 DHYLLQCNKLIVDDFIAKLTVYKLRSQIQISKVDQEYVSLFFNMANEIIASKF----NTI 121 Query: 123 ADVLLHRTWGH--NEKIASDIKTY------------HELRINH-------------GIVD 155 + +G N+ +D+ + EL +N G+VD Sbjct: 122 QGFTIQNQYGFFFNDPRLADLGVHGIILKDKFDDLVKELNVNLLPLDTYVKICHQVGLVD 181 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTDD 212 + S F + + LNG+S KGC++GQE +R+ +N IRKR II G+ + Sbjct: 182 LVPELALSNYFSLELNLKELNGVSFKKGCFVGQENTARMNLKNKIRKRVFPIQIIQGSVE 241 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + G PI ++ IG + + + I ++ H + + ++L +++ P+W Sbjct: 242 I---GQPIKDNEKTIGKI-ISLDPACFGILDAEESKHLLDQTISLEQSSIKILK--PYW 294 >gi|91205503|ref|YP_537858.1| glycine cleavage T-protein [Rickettsia bellii RML369-C] gi|157827218|ref|YP_001496282.1| glycine cleavage T-protein [Rickettsia bellii OSU 85-389] gi|91069047|gb|ABE04769.1| Glycine cleavage T-protein [Rickettsia bellii RML369-C] gi|157802522|gb|ABV79245.1| Glycine cleavage T-protein [Rickettsia bellii OSU 85-389] Length = 273 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 15/275 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+ IK+ G ++ FLQ + T D+ Y + +L QG+ L F + + Sbjct: 5 LNNREVIKIAGSDSLKFLQNLTTNDINKSNYCY---TYLLNNQGRYLFDFFVYVHNIEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++ID + +LID L FYK RS + I + ++QE + S + R ++ Sbjct: 62 YIDIDEKSKTALIDHLNFYKFRSKIEIVDCKDEYKIAYFHQE--LNMDSLVTARDPRYNL 119 Query: 126 LLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L R+ ++ S I K Y + + N I+D D + P ++ L G+S Sbjct: 120 LGFRSITLSQSCHSRIGGNLSKKLYLDDKYNFAIIDGVDDLIVGKSIPTLYGIEELKGVS 179 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK 237 KGCY+GQEV+SR +++ +IR++ I +DL IL + IG + K Sbjct: 180 YDKGCYVGQEVISRAKYQGVIRRKIYKIIAEEDLSSLIKDEEILAGNDSIGIICSSYQNK 239 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+A+ + +K + K + V GV+V S WY Sbjct: 240 AIALVKEEK--YLASKEEDINVGGVKVDLSLAPWY 272 >gi|163740727|ref|ZP_02148120.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] gi|161385718|gb|EDQ10094.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] Length = 246 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 19/245 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 +SN+ +++ G FLQ +IT DV K+ +G +A+LTPQGK L F ++ E Sbjct: 1 MSNRRILRLSGADTRDFLQGLITNDVT----KVDQGLVYAAMLTPQGKYLADFFVA-AEG 55 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D ++++D S SL +L Y+LR+ V IE + + D R Sbjct: 56 DDLLVDVDESLAASLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD 111 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L R +G + D ++ +R+ H I + + P + + +A + LNG+ K Sbjct: 112 ---LGWRMYGA--QPGDDGSDWNAIRVAHCIPETGIELGPDS-YILEAGFERLNGVDFRK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQEV +R++H+ +RK +T + G+ I D +GTL G +A+A Sbjct: 166 GCYVGQEVTARMKHKTTLRKGLATVT-VEGEAAIGTEIRRADKPVGTLFTQAGDQAIAYL 224 Query: 243 RIDKV 247 R D+ Sbjct: 225 RFDRA 229 >gi|326429004|gb|EGD74574.1| hypothetical protein PTSG_05939 [Salpingoeca sp. ATCC 50818] Length = 372 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 33/278 (11%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++S ++V G FLQ ++T DV+ + K R S +L P+G++L+ + +I + F L Sbjct: 77 SRSVLQVDGADGAEFLQGMLTNDVVEMEDKDVRFSMLLNPKGRVLVDAFVHRISPERFYL 136 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFSI---- 122 ++ R S+ D ++LRS V E + ++ V S + NS + F + Sbjct: 137 DLPRPLIRSVADYFTRFRLRSQV--EFRDVSDTVDSVVGMNVDENSLKQLTANFDVLNFQ 194 Query: 123 ADVLLHRT-------W-----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 D +H+T W ++ A D TY +LRI+ G + D P Sbjct: 195 PDPRIHQTEPYCRSLWRGVCTRPSTDSDSDDNAAHDEHTYQQLRISMGFGEGPVDHQPKK 254 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPPSGSPILT 222 P +D L+G+S TKGCYIGQE+ +R H + RKR M IT + P I T Sbjct: 255 SLPLQCNLDYLHGVSWTKGCYIGQELTARTHHMGMTRKRLMPITLHAPTTVAPGSKVINT 314 Query: 223 DDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 + + +G + G ALA+ R++ KG L V Sbjct: 315 ETGKAVGDVRSQAGVHALAMIRLEPA-----KGAQLAV 347 >gi|85707165|ref|ZP_01038252.1| aminomethyl transferase family protein [Roseovarius sp. 217] gi|85668324|gb|EAQ23198.1| aminomethyl transferase family protein [Roseovarius sp. 217] Length = 270 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 20/253 (7%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + +++ GK A+ FLQ ++T D+ L + +AILTPQGK L FL+S+ D L Sbjct: 24 TRRILQITGKDALHFLQGLVTNDLNKLDQGLVY-AAILTPQGKYLADFLLSR-HGDAIRL 81 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++D S L+ +L YKLR++V + +++ + G E ++ D Sbjct: 82 DVDDSLAPMLLQRLTLYKLRADVTLTQTDLKVLRGT--GPAPEGALTDPRHPD------- 132 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R +G E D + +R+ H I + + P T F +A + LNG+ KGC Sbjct: 133 -LGWRLYGDAE--GDDGSDFERIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGC 188 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIAR 243 Y+GQEV +R++H+ +RK + + P GS I T + + GTL G + +A R Sbjct: 189 YVGQEVTARMKHKTELRK-GLTMVAVHGTAPIGSEIRTPEGKPAGTLYTQSGGRGIAYLR 247 Query: 244 IDKVDHAIKKGMA 256 D+ + G A Sbjct: 248 HDRAAAGMIAGEA 260 >gi|221116643|ref|XP_002154366.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 560 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 19/279 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLIS 58 ++ VY ++ + V GK LQ +IT DV L + S +L QG+IL + Sbjct: 287 IACVY--DEKWFLVHGKDCKKLLQGMITNDVSLLDNNLVNCIYSMVLNVQGRILYDLFLH 344 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 K E +++E + +D L+ L YKLRS V E + V +S++ + + +D Sbjct: 345 K-HEHGYLMECNSCFKDELVSYLNRYKLRSKVFFENRDDLNVYVSFSSD--MFDHFVVDP 401 Query: 119 RFSIADVLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 R L +R + + +D I Y LR GI + + + H+ + LL Sbjct: 402 RLP---KLGYRNLSTKKIVKNDFGDISCYTNLRYQLGISE-GVEVINGIPLEHN--LALL 455 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 NG+S TKGCYIGQE+V+R H ++RKR P++++ L + + D ++G L + Sbjct: 456 NGVSFTKGCYIGQELVARAHHTGVVRKRVVPLLLSREHCLLDGNTVCMEGDFQVGKLLGI 515 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GK A+ + R+ ++ K + + + VKA P W+ Sbjct: 516 SGKNAIGLLRLKEI-FDDKNKLHIKDSDISVKAFKPDWW 553 >gi|296230768|ref|XP_002760882.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Callithrix jacchus] Length = 357 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 35/301 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA-ILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ P G A L QG+ ++L Sbjct: 53 LDERALLRVRGPDAAPFLLGLLTNELPLPGPAAGDAPPPPRAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 Y L +EE F+LE D S + +L L Y++R V +E P V + Sbjct: 113 YGLREHLEEMSGFLLECDSSVQGALQKHLALYRIRRKVTVEQHPDLRVWAVLPRSPEAFG 172 Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156 ++ + ER +L+ R NE A D+ YH+ R G+ + Sbjct: 173 AAPLQERAGTDAILIRDPRTPSMGWRLLTQNEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H IIRKR + D LP S Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGIIRKRLFPVRLLDPLPTS 292 Query: 217 G-SP---ILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G SP +LT+ + +G G LA+ R +K+ + + V + AS P W Sbjct: 293 GISPGAEVLTESGQTVGKYRAGQGNVGLALLRSEKIKGPLHIRASKGAQ-VALAASVPDW 351 Query: 272 Y 272 + Sbjct: 352 W 352 >gi|114798165|ref|YP_759588.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444] gi|114738339|gb|ABI76464.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444] Length = 271 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 13/266 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ + + G I L+ +T V AR A+LTPQGKI+ ++ +I D Sbjct: 4 LPDRAILSLTGPDTIALLERTVTHTVAGWAEGEARYGALLTPQGKIIADYIAHRIA-DGV 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ D L+ +L ++LRS V EI +V S D R Sbjct: 63 LIDVHEDAADDLMKRLKMFRLRSAV--EIMRDEALV------SAIDVSGVPDPRTP---K 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L HR+ A + + L I+ G+ + D+ + +FP D MD++ GI KGC+ Sbjct: 112 LPHRSIVPAGDAAEPLPGWDALAISAGVPEWGRDYRAAEVFPTDINMDVMTGIDYRKGCF 171 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV SR++ + +IRKR + + G + L +GT+ +ALA+ R D Sbjct: 172 VGQEVASRMKRKGLIRKRTVRLKG-EGLVVGAELRAGTAGSLGTVTSAAAGEALALIRTD 230 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271 + AI+ +TV+ + W Sbjct: 231 RFAKAIQDKQPVTVNDAPAEIDGAPW 256 >gi|198424567|ref|XP_002123278.1| PREDICTED: similar to CG8043 CG8043-PA [Ciona intestinalis] Length = 329 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 37/288 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++++ +++ GK I LQ ++T DV LP + +L QG+I + LI + Sbjct: 37 LNHRAVVQLGGKDTIEHLQGLVTNDVTLLPSSKCMYAMMLNTQGRID-HNLILHWNDGEV 95 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQ----------EHTFSNS- 113 +++ D S+ D + L YKLR V I+E +N + SWN+ H +N Sbjct: 96 LIDCDESRADIFMKLLKRYKLRKKVEILERNDLN-IWQSWNESCSNVMPDVKHHVCANPD 154 Query: 114 ---SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 + R D ++ + + K YH R G+ + + D P P ++ Sbjct: 155 PRVKLMGWRVVSCDQPC------DDVMMTSSKDYHIWRYKVGVPETDIDLPPGKSLPLES 208 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM-IITGTDDLPPSGSPILTDDIE- 226 +D ++GI+ KGCY+GQE+ +R H ++RKR P+ I+ G +P G+ + +++ + Sbjct: 209 NLDFMHGINFHKGCYLGQELTARTHHTGVVRKRLIPVEILEGK--VPEPGTSLRSENNKS 266 Query: 227 IGTL-GVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 G L GVV GK LA+ ++D +G LT G ++K P W+ Sbjct: 267 AGRLRGVVGGKHGLALIKLD------YEGQILTTSGGTKLKGQRPLWW 308 >gi|58584606|ref|YP_198179.1| aminomethyltransferase related to GcvT [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418922|gb|AAW70937.1| Predicted aminomethyltransferase related to GcvT [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 265 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 16/256 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ I + G FLQ +IT D+ L + A S +L+PQGK L F + + Sbjct: 1 MGYIPLPSRGVIVLYGPDTRDFLQGVITNDINKLNSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----VLSWNQEHTFSNSS-- 114 + +LE + +I+KL L++ + ++I+ I+ + +L + SN S Sbjct: 61 GK-CILLECENMYLQQIIEKLDL--LKTYLRVKIKDISALYKVGILFDTKSTECSNESQV 117 Query: 115 -FIDERFSIADVLLHRTWGHNE--KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 F D R + ++ R NE ++ D Y +RI + + D D + + FP L Sbjct: 118 IFQDPRHKLLEM---RIIHKNEIKELVGDFAQYERVRIQNLVPDGAKDMVQNLSFPLQYL 174 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTL 230 +D +NGIS KGCYIGQEVVSR+ + I RK+ ++ G + LP G+ + + + E+G L Sbjct: 175 IDKINGISFNKGCYIGQEVVSRMSRQEIFRKKLYLVEGDNALPNIGTKVTNENNEEVGEL 234 Query: 231 GVVVGKKALAIARIDK 246 + LA+ K Sbjct: 235 RSSIDNIGLALLNTGK 250 >gi|260433135|ref|ZP_05787106.1| aminomethyl transferase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416963|gb|EEX10222.1| aminomethyl transferase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 245 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 12/242 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S + +++ G FLQ +IT D+ L + +A+LTPQGK + F + K + + Sbjct: 1 MSTRRIVRLTGADTDSFLQGLITNDIRKLDDGLVY-AALLTPQGKYIADFFL-KRDGNGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ D+LI +L YKLRS V I+ ++ +H + + Sbjct: 59 LLDVAEDLADTLIKRLGMYKLRSEVSIDETDLH-------LQHGTGPAPQGAQPDPRHPD 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + R + + D + +R+ H I + + P T + +A + LNG+ KGCY Sbjct: 112 MGWRAYSPAPET-DDGTDWDAIRVRHCIPESGIELTPET-YILEAGFERLNGVDFKKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + G + P G+ I++DD GTL G KA+A R+D Sbjct: 170 VGQEVTARMKHKTQLRK-GLQVVGIEGAAPVGTQIMSDDKPAGTLFTQSGGKAIAHLRLD 228 Query: 246 KV 247 + Sbjct: 229 RA 230 >gi|304320079|ref|YP_003853722.1| glycine cleavage system T protein, aminomethyltransferase [Parvularcula bermudensis HTCC2503] gi|303298982|gb|ADM08581.1| glycine cleavage system T protein, aminomethyltransferase [Parvularcula bermudensis HTCC2503] Length = 279 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 31/282 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIIT----ADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEE 62 + + V G FL ++T AD L Y A+LTPQGKIL YF+ ++ Sbjct: 9 TRDLVSVAGDDRFTFLGNVLTIRCDADGPPLRY-----GALLTPQGKILDTYFMWAR--G 61 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D ++ ++ + + ++ +L Y LR+ V I P++ + + +H + R Sbjct: 62 DHYLFDLPKGRGEAFAGRLKRYALRAAVTI--APVDDINVGIRPDHPTDQGP--NGRDDA 117 Query: 123 ADVLL----------HRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDAL 171 A LL W + + ++ Y + I GI D T F + FP D Sbjct: 118 ALTLLPDPRLPTLGARGLWAGSAAAGAPVEAEYRDHLIRLGIPDLGTGFDEADAFPLDVN 177 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D L GI KGC++GQEV SR+ + IRKR ++G +P G ++ +I++GT+ Sbjct: 178 LDRLGGIDHKKGCFVGQEVASRMFRKGEIRKRTYCLSGA-QIPALGQSVMVGEIKLGTVT 236 Query: 232 VVV--GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G+ ALA+ R+D++ + T G ++ + P W Sbjct: 237 ARSGDGRAALALVRLDRL-GGREDSAVTTADGADLQLTAPFW 277 >gi|239946743|ref|ZP_04698496.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921019|gb|EER21043.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 308 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 47/309 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT + Y + +L QG+ L F + + Sbjct: 5 LSNREVIKIIGLDSVKFLQNLITNYIKKNNYCY---TYLLNNQGRYLFDFFVYVPNLEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123 L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++ Sbjct: 62 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTMLG 121 Query: 124 -------------DVLLHRTWGHN------------EKIASDI-------------KTYH 145 D + +T + E + + I K Y Sbjct: 122 FRSIYEFGVIPQLDRGIQKTIKQDWIPRSSRGMTRVESVHATIPPRESGDPASFNEKLYL 181 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++ Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241 Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 IT +DL IL D+ +IG + KA+A+ R +K + K +TV G++ Sbjct: 242 KITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALIREEK--YLADKEADITVKGIK 299 Query: 264 VKASFPHWY 272 + S WY Sbjct: 300 INLSLAPWY 308 >gi|57238820|ref|YP_179956.1| hypothetical protein Erum0890 [Ehrlichia ruminantium str. Welgevonden] gi|58578749|ref|YP_196961.1| hypothetical protein ERWE_CDS_00850 [Ehrlichia ruminantium str. Welgevonden] gi|57160899|emb|CAH57804.1| putative aminomethyl transferase [Ehrlichia ruminantium str. Welgevonden] gi|58417375|emb|CAI26579.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 280 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 24/278 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+S I G L T ++L L A S +LTP G+ L F + I+ Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFV--IQGS 62 Query: 64 TFIL-EIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS-----WNQEHTFSNSS- 114 +IL + S R+ +I+K L YKL++ V+I+ Q GV + + +T+ + Sbjct: 63 KYILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDT 122 Query: 115 --FIDERFSIAD--VLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 F D R S V+ H + + E+ + + Y LRI++ + D N D + T FP Sbjct: 123 VFFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFP 182 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 M LNGI KGCYIGQEVV+R+ +R I+K I +L + + ++++ E+ Sbjct: 183 LHFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQELFEN-AKVMSNQQEV 240 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 GT+ +G L + +++ L V G +VK Sbjct: 241 GTVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVK 274 >gi|126733404|ref|ZP_01749151.1| aminomethyl transferase family protein [Roseobacter sp. CCS2] gi|126716270|gb|EBA13134.1| aminomethyl transferase family protein [Roseobacter sp. CCS2] Length = 244 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + ++ + + G + FLQ ++T DV I +A+LTPQGK + F + ++D Sbjct: 1 MPERTVLSISGDDRMSFLQGLVTNDVTKADGAIIY-TALLTPQGKYIADFFVIG-QDDRL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ S +L +L Y+LR+ V IE + V+S +F D R D Sbjct: 59 LIDVATSHAQTLGQRLTMYRLRAAVTIEQTDL---VVSRGTSPK-PEGAFADPRH---DA 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + R +G + I++D + +R+ H I + T + +A + LNG+ KGC+ Sbjct: 112 MGWRAYG-DTNISNDTD-WDAVRVKHLIPQTGVELTDDT-YVLEAGFEALNGVDFKKGCF 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+V+R++H+ ++K +T P G I D GTL V G ALA R D Sbjct: 169 VGQEIVARMKHKTTLKKGLAQVTIKGHAMP-GDAITADGKPAGTLYTVSGDNALAFLRFD 227 Query: 246 KVDHAIKKGMA 256 + D ++ G A Sbjct: 228 RADGLMQAGDA 238 >gi|311249489|ref|XP_003123660.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like [Sus scrofa] Length = 354 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 46/305 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP---YKIARG--SAILTPQGK----ILLYFL 56 L ++ ++V G + PFL ++T + L LP +AR + L QG+ ++LY L Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNE-LPLPGSASAVARAGYAHFLNVQGRTLYDVILYGL 111 Query: 57 ISKIEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNS 113 +E TF+LE D S D+L L+ +++R V +E P V VL E S Sbjct: 112 PEHSDEQPTFLLECDSSVLDALQRHLVLHRIRRKVTVEPCPELRVWAVLPCAPEEA-GRS 170 Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157 + E+ +L R +E A D++ YH R G+ + Sbjct: 171 VPLQEKAQCTTILTRDPRTARMGWRLLSQDEGSALVPGGRPGDLQDYHRHRYQQGVPEGV 230 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--- 214 D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + + LP Sbjct: 231 HDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHTGVIRKRLFPVQLSGRLPVGS 290 Query: 215 -PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAI-----KKGMALTVHGVRVKAS 267 G+ +LT+ + G +G LA+ R +K+ + + G+ V + AS Sbjct: 291 IAPGTSVLTESGQAAGKYRAGLGDVGLALLRTEKIKGPLHIRTSESGL------VALTAS 344 Query: 268 FPHWY 272 P W+ Sbjct: 345 VPDWW 349 >gi|254464189|ref|ZP_05077600.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I] gi|206685097|gb|EDZ45579.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I] Length = 244 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S++ +++ G A FLQ ++T +V L + +A+LTPQGK + F ++ + D Sbjct: 1 MSDRRILRLSGSDAKSFLQGLVTNNVDRLGDGLVY-AALLTPQGKYIADFFLA-ADGDAV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++D + L+ +L Y+LR++V +E+ + + + D R Sbjct: 59 LLDVDAPLAEGLLKRLNMYRLRADVQVEMTELQ----VKRGTGAAPDGALEDPRHPAMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L+ G + D + +R+ H I + + P + + +A + LNG+ KGCY Sbjct: 115 RLYGLEGGD-----DGSDWDAIRVAHCIPETGVELGPES-YILEAGFEALNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 +GQEV +R++H+ +RK R + + G P G+ I GTL G K +A R Sbjct: 169 VGQEVTARMKHKTELRKGFRTVEVEGA---APVGTEITAGGKPAGTLFTQSGGKGIAYLR 225 Query: 244 IDKVDHAIKKGMA 256 D+ ++ G A Sbjct: 226 FDRAKGEMQAGDA 238 >gi|58696941|ref|ZP_00372437.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|58698833|ref|ZP_00373708.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58698939|ref|ZP_00373799.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630247|ref|YP_002727038.1| aminomethyl transferase family protein [Wolbachia sp. wRi] gi|58534541|gb|EAL58680.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534649|gb|EAL58773.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58536828|gb|EAL60046.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592228|gb|ACN95247.1| aminomethyl transferase family protein [Wolbachia sp. wRi] Length = 268 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 26/261 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114 + T +LE + +I+KL L++ + ++I+ ++ GV+ + S S Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLKVKIKDVSALYKVGVLFNTKLAECSSESQV 117 Query: 115 -FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIF 166 F D R H+ G H ++I D Y ++RI + + D D + ++ F Sbjct: 118 IFQDPR--------HKLLGMRIIHKDEIKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSF 169 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DI 225 P L+D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + + Sbjct: 170 PLQFLIDKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNE 229 Query: 226 EIGTLGVVVGKKALAIARIDK 246 EIG L V LA+ K Sbjct: 230 EIGELRSSVDNIGLALLNTGK 250 >gi|329663396|ref|NP_001192509.1| IBA57, iron-sulfur cluster assembly homolog [Bos taurus] gi|297476223|ref|XP_002688553.1| PREDICTED: hypothetical protein [Bos taurus] gi|296486216|gb|DAA28329.1| hypothetical protein BOS_7084 [Bos taurus] Length = 358 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 88/310 (28%), Positives = 137/310 (44%), Gaps = 52/310 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA----------ILTPQGK----I 51 L ++ ++V G + PFL ++T + L LP A G A L QG+ + Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNE-LPLPGP-AVGEASTSARAGYAHFLNVQGRTLYDV 110 Query: 52 LLYFLISKI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEH 108 +LY L + E+ TF+LE D S D+L LL +K+R V +E P V VL Q Sbjct: 111 ILYGLPERSSEQPTFLLECDSSVVDALQRHLLLHKIRRKVTVEPCPELRVWAVLPCAQRE 170 Query: 109 TFSNSSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHG 152 + + ++ A VL RT+ ++ S D++ YH R G Sbjct: 171 A-GGAGPLRKKTVCAPVLTRDPRTYRMGWRLLSQDEGSALVPGGRLGDLQDYHRHRYQQG 229 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT 210 + + D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR P+ +G Sbjct: 230 VPEGVHDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLFPVQFSGA 289 Query: 211 ---DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI-----KKGMALTVHGV 262 + P S + G +G LA+ R +K+ + + G+ V Sbjct: 290 VPGGGIAPGASVLTESGQAAGKYRAGLGDVGLALLRSEKIKGPLHIRTSESGL------V 343 Query: 263 RVKASFPHWY 272 + AS P W+ Sbjct: 344 ALTASVPDWW 353 >gi|67906657|gb|AAY82747.1| predicted aminomethyltransferase [uncultured bacterium eBACmed18B02] Length = 296 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 28/295 (9%) Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 + +VY L +++ + + G A+ FLQ +I+ D+ + + +++L+PQGK L F+I K Sbjct: 3 IKNVYILKDRAILYINGDDAVSFLQNLISNDINKVSETYSCFASLLSPQGKFLYEFIIVK 62 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---------------------EIQPIN 98 + ++++ ++S+ D L +L YKLRS V I E + + Sbjct: 63 -HKSGYLIDCEKSQVDELYKQLSVYKLRSKVEILNLSNEFVVAAFSYEKFLTFDEAKKVP 121 Query: 99 GVVLSWNQEHTFSN--SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 G L + ++ F + + + R I L+ + E +DI Y+ L GIV Sbjct: 122 GFTLKFREDPIFLDPRNKQLGARLIINLEKLYLSLKKLELHDADINEYYSLSHKLGIVPK 181 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 N + L + F + D LNGI KGCY+GQE +RI+ +N + KR + I D Sbjct: 182 NLNQLQNKAFGIECNYDELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIDIIDGKLHE 241 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G I + EIG V+ A I +D + +K P W Sbjct: 242 GEGIFNKENEIGK---VLINNEYPFALIKFLDKNFDENAEFKTKEASIKIKKPEW 293 >gi|332185466|ref|ZP_08387214.1| aminomethyltransferase folate-binding domain protein [Sphingomonas sp. S17] gi|332014444|gb|EGI56501.1| aminomethyltransferase folate-binding domain protein [Sphingomonas sp. S17] Length = 252 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L++++ +++ G+ FLQ ++T DV L R + +LTPQGK L FL+ E Sbjct: 11 ATTLTDRTLLRIAGEDVCGFLQGLVTQDVQGLTADAPRWAGLLTPQGKALFDFLLWA-EG 69 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D +++ + ++ ++L +L Y+LR I I P+ + + W+ +++ D R Sbjct: 70 DAILIDAEATQAEALTRRLSIYRLRR--AITIAPVPELAVHWS---LSADTQPRDPRLPD 124 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L HR W E S + + R++ G+ + + + LNG+S TK Sbjct: 125 ---LGHRWWAPAEP-GSATEAWTAHRLSLGVTEGVGELGSGETLWLECNARELNGVSFTK 180 Query: 183 GCYIGQEVVSRIQHRNIIRKR 203 GCY+GQE +R+ HR+ + +R Sbjct: 181 GCYVGQENTARMHHRSKVNRR 201 >gi|84516026|ref|ZP_01003387.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] gi|84510468|gb|EAQ06924.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] Length = 243 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 19/254 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 +S++ + + G + FLQ ++T DV + A+G +A+LTPQGK + F + ++ Sbjct: 1 MSDRMVLSISGVDRVSFLQGLVTNDVT----RAAQGIIYAALLTPQGKFIADFFVLG-QD 55 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D ++++ +S +L+ +L Y+LR+ V I + V+S T + D R + Sbjct: 56 DRLLVDVAQSHGATLLQRLSMYRLRAAVQIGQTDL---VVSRGTGST-PPGALPDPRHA- 110 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + R +G ++ SD + LR+ H I + + P T + +A + L+G+ K Sbjct: 111 --GMGWRFYGDSD--ISDQTDWDALRVAHLIPETGIELTPET-YVLEAGFEALHGVDFRK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQE+V+R++H+ +RK + D G PI D + G L + G A+A Sbjct: 166 GCYVGQEIVARMKHKTELRK-GLARVRIDGAAQPGDPITADGKDTGVLHTISGDHAIAYL 224 Query: 243 RIDKVDHAIKKGMA 256 R D+ ++ G A Sbjct: 225 RFDRATGPMQAGSA 238 >gi|159044636|ref|YP_001533430.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12] gi|157912396|gb|ABV93829.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12] Length = 261 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 25/255 (9%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-------SAILTPQGKILLYFLISKIE 61 ++ I+V G+ A FLQ ++T D +A+G +A+L+PQGK L F + + Sbjct: 19 RAVIRVTGRDARDFLQGMVTND-------LAKGLEHGLVYAALLSPQGKYLADFFVLA-Q 70 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 +D +L+ + L+ +L +KLR++V +E + V + D R Sbjct: 71 DDALLLDAPEALAPDLLKRLTMFKLRADVTLEKTEMP-VARGLGPA---PEGALADPRDP 126 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 L+ G E + + LR+ H + + T+ +P+ + + + L+G+ Sbjct: 127 ALGWRLYGVAGGPE-----VTDWDALRVAHLVPEAGTELIPNDSYILEMGFERLHGVDFK 181 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQEVV+R++H+ +RK + + P G I +G LG G +ALA Sbjct: 182 KGCYVGQEVVARMKHKTELRKGLARVAVAGEAAP-GDEITAGGKPVGVLGTRSGDRALAY 240 Query: 242 ARIDKVDHAIKKGMA 256 R D+ ++ G A Sbjct: 241 LRFDRATGPMEAGAA 255 >gi|58197556|ref|NP_001010867.1| putative transferase C1orf69, mitochondrial precursor [Homo sapiens] gi|74744873|sp|Q5T440|CAF17_HUMAN RecName: Full=Putative transferase CAF17, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|55959201|emb|CAI15071.1| chromosome 1 open reading frame 69 [Homo sapiens] Length = 356 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 34/300 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ A G A L QG+ ++L Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 Y L E F+LE D S + +L L Y++R V +E P V + Sbjct: 113 YGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGA 172 Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157 + + ER A +L+ R +E A D+ YH+ R G+ + Sbjct: 173 ASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGV 232 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S Sbjct: 233 RDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSG 292 Query: 217 ---GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ +LT + +G G LA+ +K+ + + V + AS P W+ Sbjct: 293 ITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 351 >gi|58616809|ref|YP_196008.1| hypothetical protein ERGA_CDS_00820 [Ehrlichia ruminantium str. Gardel] gi|58416421|emb|CAI27534.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 280 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 24/278 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+S I G L T ++L L A S +LTP G+ L F + I+ Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFV--IQGS 62 Query: 64 TFIL-EIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS-----WNQEHTFSNSS- 114 +IL + S R+ +I+K L YKL++ V+I+ Q GV + + +T+ + Sbjct: 63 KYILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDT 122 Query: 115 --FIDERFSIAD--VLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 F D R S V+ H + + E+ + + Y LRI++ + D N D + T FP Sbjct: 123 VFFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFP 182 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 M LNGI KGCYIGQEVV+R+ +R I+K I L + + ++++ E+ Sbjct: 183 LHFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQKLFEN-AKVMSNQQEV 240 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 GT+ +G L + +++ L V G +VK Sbjct: 241 GTVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVK 274 >gi|114573041|ref|XP_514253.2| PREDICTED: putative transferase CAF17, mitochondrial isoform 2 [Pan troglodytes] Length = 356 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 34/300 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ A G A L QG+ ++L Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 Y L E F+LE D S + +L L Y++R V +E P V + Sbjct: 113 YGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGA 172 Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157 + + ER A +L+ R +E A D+ YH+ R G+ + Sbjct: 173 ASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGV 232 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S Sbjct: 233 RDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSG 292 Query: 217 ---GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ +LT + +G G LA+ +K+ + + V + AS P W+ Sbjct: 293 ITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 351 >gi|42520194|ref|NP_966109.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409932|gb|AAS14043.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 268 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 15/259 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114 + T +LE + +I+KL L++ + ++I+ ++ GV+ + S S Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117 Query: 115 -FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 F D R + + ++H+ ++ D Y ++RI + + D D + ++ FP L+ Sbjct: 118 IFQDPRHKLLGMRIIHKD--EMKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLI 175 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLG 231 D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + + EIG L Sbjct: 176 DKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELR 235 Query: 232 VVVGKKALAIARIDKVDHA 250 V A+ K HA Sbjct: 236 SSVDNIGFALLNTGK-SHA 253 >gi|149915805|ref|ZP_01904330.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] gi|149810387|gb|EDM70232.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] Length = 244 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 19/248 (7%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ +++ G A FLQ ++T ++ L + + +A+LTPQGK + F ++ E T +L Sbjct: 2 TRTILEITGSEAQDFLQGLVTNEMRKLDHGLVY-AAMLTPQGKYIADFFLAGHGE-TILL 59 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++D S L+ +L YKLR++V I E+Q G + + + D R Sbjct: 60 DVDESLSAQLMQRLSMYKLRADVTITQSELQVKRGTGPA-------PDGALADPRHPDLG 112 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L+ G + D + +R+ H I + + L + F +A + LNG+ KGC Sbjct: 113 WRLYGAEGGD-----DGTDWEAIRVAHCIPETGIE-LSADTFILEAGFERLNGVDFKKGC 166 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y+GQEV +R++H+ +RK + P G+ I + + GTL G K +A R Sbjct: 167 YVGQEVTARMKHKTELRKGLATVE-VHGTAPVGTQITSSEKPAGTLFTQSGGKGIAYLRF 225 Query: 245 DKVDHAIK 252 D+ ++ Sbjct: 226 DRASGQMQ 233 >gi|152013705|gb|ABS19968.1| glycine cleavage T protein [Artemia franciscana] Length = 231 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 3/199 (1%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N+ ++V G + PFLQ +IT D+ L + + + L QG++L ++ + ++L Sbjct: 33 NRGLVRVSGVDSAPFLQGLITNDINHLEKQPSMYTMFLNRQGRVLFDVVVFRENNHDYLL 92 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADVL 126 + D +SL+ + ++LR IE+ P++ + + + F F D R + Sbjct: 93 DCDSRCINSLVKHMKMFRLREK--IEVNPVDNLAIVVTSDLNFFRGLFWHDPRTEMLGTR 150 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 EK+ S Y R GI + D P FP ++ D L+G+S TKGCYI Sbjct: 151 AVIDANLVEKLVSKTTFYSLQRFELGIPEGIEDLPPGECFPLESNCDYLHGVSFTKGCYI 210 Query: 187 GQEVVSRIQHRNIIRKRPM 205 GQE+ +R H + RKR M Sbjct: 211 GQELTARTYHTGVTRKRLM 229 >gi|329850297|ref|ZP_08265142.1| glycine cleavage T-protein C-terminal barrel domain protein [Asticcacaulis biprosthecum C19] gi|328840612|gb|EGF90183.1| glycine cleavage T-protein C-terminal barrel domain protein [Asticcacaulis biprosthecum C19] Length = 218 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%) Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSN- 112 L+S D L++ ++ R+ L+ KL Y+LR+ V I+ P+ E S+ Sbjct: 6 LLSPRSADEVWLDVPQTAREELVAKLNMYRLRAKVTIDALDLPVYAAFDGPMPEGFASDP 65 Query: 113 -SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 S I FS A +G A+D + R ++G+ + TDF ++ DA Sbjct: 66 RSEVIGADFSFA-------YGPQTPNATDWAAF---RYSYGLAEAGTDFAKDELYAIDAN 115 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +DLLNGI KGCY+GQE+ SR++ R I+ R + + LPP G+ +L + G + Sbjct: 116 LDLLNGIDFKKGCYVGQELTSRMKRRGQIKNRILPLRHAGHLPP-GAEVLNGERRAGEVL 174 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + +LA+ R+D++D LT G + + P W Sbjct: 175 ASIDGNSLALMRLDRLDG------ELTCDGHTLNLTIPDW 208 >gi|146278057|ref|YP_001168216.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17025] gi|145556298|gb|ABP70911.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17025] Length = 255 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 16/260 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57 M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F I Sbjct: 1 MPGEIATDRRLWELTGKDGLHFLQGLVSNDVR--PLERADGIVWAALLSPQGKYLADFFI 58 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 ++E FI DR ++ +L YKLR++V +I P++ V+ E + D Sbjct: 59 VRLEGRLFIDISDRLA-EATFRRLGMYKLRADV--QIAPLDLPVVRGLGEP--PTGALPD 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R L R +G S + +R+ H I + + +P + ++ + L+G Sbjct: 114 PRHPD---LGWRGYGLTGDAPS--IDWDAIRVAHVIPESGLELIPDDSYILESGFERLHG 168 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK + ++ + D P G+ I D +GTL G + Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRKGLVRVSISGDA-PFGAEITADGKPVGTLFTRSGDR 227 Query: 238 ALAIARIDKVDHAIKKGMAL 257 A+A R D+ ++ G A+ Sbjct: 228 AIAFVRHDRAAGEMRAGEAV 247 >gi|255261983|ref|ZP_05341325.1| glycine cleavage T protein [Thalassiobium sp. R2A62] gi|255104318|gb|EET46992.1| glycine cleavage T protein [Thalassiobium sp. R2A62] Length = 241 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 22/252 (8%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTFILE 68 +++ G A PFLQ+++T D+ RG +A+LTPQGK +L F + +D ++ Sbjct: 5 LELTGSDATPFLQSLVTNDI------NKRGLVYTALLTPQGKFMLDFFVLN-HDDALWID 57 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + L +L Y+LR++V+I ++ V + ++ D R + + Sbjct: 58 VAADHAAGLAQRLTMYRLRADVMI--AELDITVSRGTGDAPIG--AYPDPR---SPAMGW 110 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G + + +D + LR+ + + + P + + + + LNG+ KGCY+GQ Sbjct: 111 RDYGEAQDMPTD---WDALRVAQMVPQLDAELGPDS-YILEMGFERLNGVDFKKGCYVGQ 166 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 E+V+R++H+ +RK ++ ++ L G+ I ++ +GT+ V G ALA R D+ + Sbjct: 167 EIVARMKHKTELRKGLARVSSSEPL-SEGAEITSNGKPVGTVHTVSGTSALAYLRFDRAN 225 Query: 249 HAIKKGMALTVH 260 I G+ +T+ Sbjct: 226 EMISDGINVTLE 237 >gi|229586836|ref|YP_002845337.1| GcvT-like putative aminomethyltransferase [Rickettsia africae ESF-5] gi|228021886|gb|ACP53594.1| GcvT-like putative aminomethyltransferase [Rickettsia africae ESF-5] Length = 335 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 141/334 (42%), Gaps = 70/334 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGKTMSNAVGES 63 Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91 +L QG+ L F + + L+ID+S + +LI L FYK RS + + Sbjct: 64 KLIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIKYLNFYKFRSKIQV 123 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131 I+ V+ S + S + D R++ ++ + W Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWL 183 Query: 132 GH--NEKIASDIKT---------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 H E S KT Y E + N I+D D + P+ + LN IS Sbjct: 184 SHRVTEGEPSSSKTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA Sbjct: 244 DKGCYVGQEVISRTKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A+ R +K + K +TV G+++ S WY Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|332252096|ref|XP_003275189.1| PREDICTED: putative transferase C1orf69, mitochondrial [Nomascus leucogenys] Length = 357 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ Y A + L QG+ ++L Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPYARAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 Y L EE F+LE DRS + +L L Y++R V +E P V Sbjct: 113 YGLQEHSEEVSVFLLECDRSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACG 172 Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156 ++ + E+ A +L+ R +E A D+ YH+ R G+ + Sbjct: 173 AASLQEKAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIG E+ +R H +IRKR + D P S Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGHELTARTHHMGVIRKRLFPVRVLDPFPTS 292 Query: 217 ----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G+ +LT + +G G LA+ +K+ + + V + AS P W Sbjct: 293 GITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDW 351 Query: 272 Y 272 + Sbjct: 352 W 352 >gi|24645123|ref|NP_649814.1| CG8043 [Drosophila melanogaster] gi|7299068|gb|AAF54268.1| CG8043 [Drosophila melanogaster] gi|28557661|gb|AAO45236.1| GH14121p [Drosophila melanogaster] gi|220946676|gb|ACL85881.1| CG8043-PA [synthetic construct] gi|220956316|gb|ACL90701.1| CG8043-PA [synthetic construct] Length = 348 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61 L N+ I+V G +PFLQ + T DV + P A A + LLY L Sbjct: 43 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117 +T ++E DR L Y++R IE+ ++ W + S + Sbjct: 103 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVMFNLKDASEAVPNPHP 160 Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157 + F D LH W K +D T Y LR G+ + Sbjct: 161 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATAASSDNSYQLLRYKQGVGEGC 220 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+ Sbjct: 221 SELTPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 278 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + LG V G K +A+ RI+KV + L + G R P W+ Sbjct: 279 -GSSQDVTSLAGAKLGRVFGFAHKHGIALLRIEKV---LNGRPELMIDGERCYVERPEWW 334 >gi|297661745|ref|XP_002809384.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Pongo abelii] Length = 357 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 35/301 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ A G A L QG+ ++L Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 Y L EE F+LE D S + +L L Y++R V +E P V Sbjct: 113 YGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACG 172 Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156 ++ + ER A +L+ R +E A D+ YH+ R G+ + Sbjct: 173 AASLQERAGAATILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTS 292 Query: 217 ----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G+ +LT + +G G LA+ +K+ + + V + AS P W Sbjct: 293 GITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDW 351 Query: 272 Y 272 + Sbjct: 352 W 352 >gi|194903760|ref|XP_001980933.1| GG11944 [Drosophila erecta] gi|190652636|gb|EDV49891.1| GG11944 [Drosophila erecta] Length = 348 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---ILTPQGKILLYFLISKIEE 62 L N+ I+V G+ +PFLQ + T DV + S L G++L ++ + Sbjct: 43 LGNRELIRVHGQEVVPFLQGLATNDVARIRSPGGPASMYAHFLNKAGRLLYDTIMYRTNN 102 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSS- 114 +T ++E DR L Y++R IE+ ++ +W + N Sbjct: 103 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVPNPHP 160 Query: 115 ----FIDERFSI-ADVLLHRT---WGHNEKIASDIKT---------YHELRINHGIVDPN 157 +D R + +L T W K D T Y LR G+ + Sbjct: 161 DLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGVGEGC 220 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T DL Sbjct: 221 SELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDL-- 278 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + LG V G K +A+ RI+KV + L + G R P W+ Sbjct: 279 -GSSQDVTSVAGAKLGRVFGSAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEWW 334 >gi|241111420|ref|XP_002399278.1| conserved hypothetical protein [Ixodes scapularis] gi|215492944|gb|EEC02585.1| conserved hypothetical protein [Ixodes scapularis] Length = 356 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 45/308 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAI----LTPQGKILLYFLIS 58 L ++ I++ GK +PFLQ +IT D L P S + L G++L FL+ Sbjct: 39 LRSRKLIRLRGKDCLPFLQGMITNDTRHLSVDPQPSVSTSCMYAMMLNAAGRVLYDFLLY 98 Query: 59 KIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQPINGVV---L 102 K + +D +LE D R +++ YKLR +V +E P G V L Sbjct: 99 KPDPRHDDEVLLECDADARSTVLKLFNLYKLRKDVRLEPCDELSVWAAFHPFCGTVDEPL 158 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTW--GHNEKIASDI-----------KTYHELRI 149 T + + ++ R +L HR + +AS+ +Y +LR Sbjct: 159 PAEIPITVAGDATVNVRDPRLYLLGHRVLLDSTQDLVASNPTFQAAPQDSSESSYTKLRY 218 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + D + FP + D ++G+S KGCYIGQE+ +R H ++RKR M + Sbjct: 219 QLGVSEGLGDLPTANCFPLEYNADYMSGVSFHKGCYIGQELTARTHHTGVVRKRIMPVVL 278 Query: 210 TDDLPPSGSPILT-----DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 D + G T +D +G V G+ LA+ R+D+ A + L+V VR+ Sbjct: 279 LDRVDGGGVASDTVVKDGNDKAVGKFRVHRGQVGLALLRVDEALSAAE----LSVGSVRL 334 Query: 265 KASFPHWY 272 P W+ Sbjct: 335 STVKPGWW 342 >gi|99034332|ref|ZP_01314366.1| hypothetical protein Wendoof_01000832 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 239 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 14/239 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDNRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114 + T +LE + +I+KL L++ + ++I+ ++ GV+ + S S Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117 Query: 115 -FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 F D R + + ++H+ ++ D Y ++RI + + D D + ++ FP L+ Sbjct: 118 IFQDPRHKLLGMRIIHKD--EMKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLI 175 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTL 230 D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + + EIG L Sbjct: 176 DKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGEL 234 >gi|73666722|ref|YP_302738.1| glycine cleavage T protein(aminomethyl transferase) [Ehrlichia canis str. Jake] gi|72393863|gb|AAZ68140.1| Glycine cleavage T protein(aminomethyl transferase) [Ehrlichia canis str. Jake] Length = 278 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 18/261 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L N+S + G A L T +VL L A S +L+P G+ + F + + E+ Sbjct: 5 IVLPNRSIVLFHGPDARQLLNRTTTNNVLNLTQNKAVYSLLLSPSGRYMYDFFVVQYEK- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-------HTFSNSS-- 114 +L+ +D +I K L YKL+S V+I + V + +E +T+ + Sbjct: 64 YILLDCCSIDKDEIIQKFLSYKLQSKVVIREKKHYKVGVFIGEESSSNVCGYTYCEGNTI 123 Query: 115 -FIDERFSIAD--VLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPH 168 F D R S V+ + + SD K Y LRIN+ + D N D + T FP Sbjct: 124 FFQDPRLSTLGLRVIFDESNEALSNVNSDAERYKDYEMLRINNTVPDCNKDMIKGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 MD N I KGCYIGQEVV+R+ + +K +I+ ++ + ++ D ++G Sbjct: 184 QFRMDEFNAIDFNKGCYIGQEVVARMYRAGVKKKIYTVISESESFDD--TKVMWDQKQVG 241 Query: 229 TLGVVVGKKALAIARIDKVDH 249 L VG L + I+ D+ Sbjct: 242 ELLSNVGNIGLCLLDINSCDN 262 >gi|165933349|ref|YP_001650138.1| aminomethyltransferase family protein [Rickettsia rickettsii str. Iowa] gi|165908436|gb|ABY72732.1| aminomethyltransferase family protein [Rickettsia rickettsii str. Iowa] Length = 335 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 141/334 (42%), Gaps = 70/334 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63 Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91 +L QG+ L F + + L+ID+S + +LI+ L FYK RS + + Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131 I+ V+ S + S + D R++ ++ + W Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWS 183 Query: 132 ------GHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 G + + Y E + N I+D D + P+ + LN IS Sbjct: 184 SHRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV+SR +++ +IRK+ IT +DL + IL D+ +IG + KA Sbjct: 244 DKGCYVGQEVISRAKYQGVIRKKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKA 303 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A+ R +K + K +TV G+++ S WY Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|84683617|ref|ZP_01011520.1| aminomethyltransferase [Maritimibacter alkaliphilus HTCC2654] gi|84668360|gb|EAQ14827.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2654] Length = 249 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 19/259 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ N++ ++ G + FL ++T +V P IA +A+ TPQGK + F + Sbjct: 1 MTGETHENRTIFRITGADRVKFLDNLVTNNVK--PGGIAY-AALQTPQGKYIADFFMVDT 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D ++++D +L +L YKLR++V +I+P L ++ +F D R Sbjct: 58 G-DALLIDVDSDLAQTLGQRLTMYKLRADV--QIEPTELFALRGRKD--MPEGAFPDPRH 112 Query: 121 SIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + W D T + LR+ + + P T F +A D LNG+ Sbjct: 113 AAL------GWRLYSDTPGDAPTTDWEALRVELNVPASGAELTPDT-FILEAGFDRLNGV 165 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKK 237 KGC++GQEV +R++H+ +RK + D G+ I TDD + G L G + Sbjct: 166 DFKKGCFVGQEVTARMKHKTELRK-GFVTVAVDGEAEPGTEITTDDGKPAGMLHTRAGDR 224 Query: 238 ALAIARIDKVDHAIKKGMA 256 A+A R D+ + + G A Sbjct: 225 AIAYLRFDRAERPMTAGDA 243 >gi|148284975|ref|YP_001249065.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str. Boryong] gi|146740414|emb|CAM80888.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str. Boryong] Length = 288 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 19/282 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 L+N++ +++ G A FL I T +V+ A+ S IL+PQG+ L +FLI+ +T Sbjct: 7 LNNRAILELSGCDASNFLLRI-TTNVIPAANGEAKYSMILSPQGRFLFDFFLIN--NHNT 63 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSNSS--- 114 F ++ S +++L+ KL +KLRS V I ++ V+ S N H N++ Sbjct: 64 FFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTAKLV 123 Query: 115 --FIDERFS-IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 + D RF+ + LL + S+ Y + I D D + P + Sbjct: 124 TQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPPEYG 183 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEIGT 229 D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +PI+ + IG Sbjct: 184 ADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNIIGY 243 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + +A+ R + I +TV ++K S P W Sbjct: 244 WCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285 >gi|195330640|ref|XP_002032011.1| GM23750 [Drosophila sechellia] gi|194120954|gb|EDW42997.1| GM23750 [Drosophila sechellia] Length = 347 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61 L N+ I+V G +PFLQ + T DV + P A A + LLY L Sbjct: 42 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 101 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117 +T ++E DR L Y++R IE+ ++ W + S + Sbjct: 102 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVPNPHP 159 Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157 + F D LH W K +D T Y LR G+ + Sbjct: 160 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASSDNSYQLLRYKQGVGEGC 219 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+ Sbjct: 220 SELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 277 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + LG V G K +A+ RI+KV + L + G R P W+ Sbjct: 278 -GSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEWW 333 >gi|83941198|ref|ZP_00953660.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] gi|83847018|gb|EAP84893.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] Length = 247 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+ Sbjct: 1 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLSA-DGDSV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + D+L+ +L YKLR++V I+ G+ L E + + ++ D R D Sbjct: 59 LLDVAEADADALVQRLTMYKLRADVTIDA---TGLHLHRGLE-SAPDDAYSDPR----DA 110 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + + D + LR+ + I + + L S F + + LNG+ KGCY Sbjct: 111 RMGWRAYRDTPQTDDTTDWDALRVTYMIPETGAE-LTSDSFILEMGFERLNGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + + P G+ I D GT+ G ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQVEISAPVEP-GTDITADGKPAGTIFTRTGTHALAYLRYD 228 Query: 246 KVDHAIKKGMA 256 + A++ G A Sbjct: 229 RAKAAMQAGDA 239 >gi|260575028|ref|ZP_05843029.1| folate-binding protein YgfZ [Rhodobacter sp. SW2] gi|259022650|gb|EEW25945.1| folate-binding protein YgfZ [Rhodobacter sp. SW2] Length = 251 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 20/259 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-----SAILTPQGKILLYF 55 M + + + V GK A+ FLQ +++ D+ L A+G +A+L+PQGK L F Sbjct: 1 MQGEAATGRRLVAVAGKDALEFLQGLVSNDLRPL----AKGPGIVWTALLSPQGKYLADF 56 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + + + +L++ ++ + +L Y+LR++V I P LS ++ + + Sbjct: 57 FVVA-QPEGLLLDLPEVLAEATLRRLAMYRLRADVQIAESP-----LSVSRGLGLAPADA 110 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + + A L R +G A + + +R+ H I + + +P + +A + L Sbjct: 111 LPDPRDPA--LGWRRYGAPGGPA--VIDWDAIRVAHCIPESGIELIPDDSYILEAGFERL 166 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 +G+ KGCY+GQEV +R++H+ +RK +++ D + P G+ IL D G + G Sbjct: 167 HGVDFRKGCYVGQEVTARMKHKTELRKG-LVLVRVDGVVPIGAEILADGKPAGQVFTQSG 225 Query: 236 KKALAIARIDKVDHAIKKG 254 + +A R D+ + G Sbjct: 226 GQGIAFLRFDRASGEMLAG 244 >gi|34581578|ref|ZP_00143058.1| hypothetical protein [Rickettsia sibirica 246] gi|28262963|gb|EAA26467.1| unknown [Rickettsia sibirica 246] Length = 335 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 70/334 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63 Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91 +L QG+ L F + + L+ID+S + +LI+ L FYK RS + + Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131 I+ V+ S + S + D R++ ++ + W Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWS 183 Query: 132 -----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + Y E + N I+D D + P+ + LN IS Sbjct: 184 SHRVTEGESPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A+ R +K + K +TV G+++ S WY Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|195572493|ref|XP_002104230.1| GD18562 [Drosophila simulans] gi|194200157|gb|EDX13733.1| GD18562 [Drosophila simulans] Length = 347 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61 L N+ I+V G +PFLQ + T DV + P A A + LLY L Sbjct: 42 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 101 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117 +T ++E DR L Y++R IE+ ++ W + S + Sbjct: 102 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVPNPHP 159 Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157 + F D LH W K +D T Y LR G+ + Sbjct: 160 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASPDNSYQLLRYKQGVGEGC 219 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+ Sbjct: 220 SELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 277 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + LG V G K +A+ RI+KV + L + G R P W+ Sbjct: 278 -GSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVDRPEWW 333 >gi|195499172|ref|XP_002096836.1| GE25894 [Drosophila yakuba] gi|194182937|gb|EDW96548.1| GE25894 [Drosophila yakuba] Length = 348 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 84/300 (28%), Positives = 124/300 (41%), Gaps = 41/300 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61 L N+ I+V G +PFLQ + T DV + P A A + LLY L Sbjct: 43 LGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILYRTNN 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSS- 114 +T ++E DR L Y++R IE+ ++ +W + N Sbjct: 103 PETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVPNPHP 160 Query: 115 ----FIDERFSIADV-LLHRT---WGHNEKIASDIKT---------YHELRINHGIVDPN 157 +D R + +L T W K D T Y LR G+ + Sbjct: 161 DLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGVGEGC 220 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T DL Sbjct: 221 SELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDL-- 278 Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + LG V G K +A+ RI+KV + L + G R P W+ Sbjct: 279 -GSNQDVTSVAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCFVERPEWW 334 >gi|157964644|ref|YP_001499468.1| putative aminomethyltransferase [Rickettsia massiliae MTU5] gi|157844420|gb|ABV84921.1| Putative aminomethyltransferase [Rickettsia massiliae MTU5] Length = 338 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGSAI---------------- 44 LSN+ IK+ G ++ FLQ +IT D+ + YK I Sbjct: 8 LSNREVIKIIGFDSVKFLQNLITNDICKSNSVEFGYKEQGAKPIIIGETTSNAVGESKSI 67 Query: 45 ---------LTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94 L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+ Sbjct: 68 DYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVIDC 127 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIA--------DVL----------LHRTW----- 131 V+ S + S + D R++ DV+ + + W Sbjct: 128 SDEYKVIYSLQKLDINSLITVRDPRYAKLGFRSINKLDVIPWLDRGIQKIIKKDWTPWSS 187 Query: 132 -GHNEKIASDIKT---------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 G E T Y E + N I+D D + P+ + LN IS Sbjct: 188 HGVTEGAPPPSTTSPSESGNLIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 247 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+ Sbjct: 248 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 307 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 308 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 338 >gi|83854688|ref|ZP_00948218.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] gi|83842531|gb|EAP81698.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] Length = 256 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+ Sbjct: 10 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLSA-DGDSV 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + D+L+ +L YKLR++V I+ ++ L E++ + ++ D R D Sbjct: 68 LLDVAEADADALVQRLTMYKLRADVTIDATELH---LHRGLENS-PDDAYSDPR----DA 119 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + + D + LR+ + I + + L S F + + LNG+ KGCY Sbjct: 120 RMGWRAYRDTPQTDDTTDWDALRVTYMIPETGAE-LTSDSFILEMGFERLNGVDFRKGCY 178 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + + P G+ I D GT+ G ALA R D Sbjct: 179 VGQEVTARMKHKTELRKGLAQVEISAPVEP-GTDITADGKPAGTIFTRTGTHALAYLRYD 237 Query: 246 KVDHAIKKGMA 256 + A++ G A Sbjct: 238 RAKAAMQAGDA 248 >gi|303227895|ref|NP_001026129.2| chromosome 1 open reading frame 69 [Gallus gallus] Length = 332 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 134/305 (43%), Gaps = 50/305 (16%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGKILLYFL 56 ++ + V G A FLQ ++T DV L +A G P QG+ L + Sbjct: 32 GRALLSVRGAEAAVFLQGLLTNDVTRL---VAAGEGPAGPPRALYAHALNVQGRCLYDLI 88 Query: 57 I-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEH 108 + S+ EE +LE D S D++ L YK+R V I P + L W E Sbjct: 89 VYRLHESQEEEPHILLECDSSVLDAIQKHLKLYKIRRKV--SISPCLDLSL-WAVVPGEQ 145 Query: 109 TFSNSSFIDERFSI-----ADVLLHR---TWGHN--EKIAS----DIKTYHELRINHGIV 154 S + D + A+V+ R G N E I +++ YH R GI Sbjct: 146 AGDISRYADRALVLTPDPRAEVMGWRLIIKAGANLPEIIPGSRIENVQDYHRHRYKQGIP 205 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP Sbjct: 206 EGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLP 265 Query: 215 ----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK--AS 267 P G+ ILT+ + G + +A+ R+ V+ + L V G +VK AS Sbjct: 266 QESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEP----LCLNVAGDKVKLTAS 321 Query: 268 FPHWY 272 P W+ Sbjct: 322 IPEWW 326 >gi|157828633|ref|YP_001494875.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801114|gb|ABV76367.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 335 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 70/334 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63 Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91 +L QG+ L F + + L+ID+S + +LI+ L FYK RS + + Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131 I+ V+ S + S + D R++ ++ + W Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWS 183 Query: 132 ------GHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 G + + Y E + N I+D D + P+ + LN IS Sbjct: 184 SHRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV+SR +++ +IR++ IT +DL + IL D+ +IG + KA Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKA 303 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A+ R +K + K +TV G+++ S WY Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|15892621|ref|NP_360335.1| hypothetical protein RC0698 [Rickettsia conorii str. Malish 7] gi|15619789|gb|AAL03236.1| unknown [Rickettsia conorii str. Malish 7] Length = 334 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 69/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIGETTSNAVGESK 63 Query: 44 ----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I Sbjct: 64 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 123 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW----- 131 + V+ S + S + D R++ ++ + W Sbjct: 124 DCSNEYKVIYSLQKLDIESLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSS 183 Query: 132 ----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + Y E + N I+D D + P+ + LN IS Sbjct: 184 HRVTEGEPPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 243 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ IG + KA+ Sbjct: 244 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNTIGVICSSYHNKAI 303 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 304 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 334 >gi|238650862|ref|YP_002916717.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic] gi|238624960|gb|ACR47666.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic] Length = 335 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 70/334 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43 LSN+ IK+ G ++ FLQ +IT D+ + YK RG+ Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63 Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91 +L QG+ L F + + L+ID+S + +LI+ L FYK RS + + Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131 I+ V+ S + S + D R++ ++ + W Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWISWS 183 Query: 132 ----GHNEKIASDIK-------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 E S Y E + N I+D D + P+ + LN IS Sbjct: 184 SHRVTEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A+ R +K + K +TV G+++ S WY Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|296809796|ref|XP_002845236.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480] gi|238842624|gb|EEQ32286.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480] Length = 408 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 45/279 (16%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLI--- 57 +L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 HLTNRSLISLSGIDSTKFLQGLITRNLSVPNNSPPTTSPFYAAFLNSQGRILNDVFIYPQ 107 Query: 58 ---SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLSW 104 S +E +++E+D+ SL+ +KLRS + +G + ++ Sbjct: 108 TAASSPDEMEYLIEVDKEHSASLLKHFKRHKLRSKLKFRALDEGERSVWALWDDGNISTY 167 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-----------KTYHELRINHGI 153 ++ SN++ I A + +R +K+ + I +TY RI G+ Sbjct: 168 HENEAISNNNAIACPDKRAPGMGYRLIASGDKLQTQIMEALPGDETSLQTYTLRRILQGV 227 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + T+ + P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ + G Sbjct: 228 AEGQTEMARESALPMDSNVDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYGLG 287 Query: 212 DLPP-SGSPILTDDIEI-----GT------LGVVVGKKA 238 PP S SP+ D I GT +G V G+ A Sbjct: 288 QSPPTSDSPVYEPDTNIILPSAGTEANISKVGTVKGRSA 326 >gi|126732783|ref|ZP_01748578.1| aminomethyl transferase family protein [Sagittula stellata E-37] gi|126706779|gb|EBA05850.1| aminomethyl transferase family protein [Sagittula stellata E-37] Length = 245 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 19/255 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +++ ++V G A FLQ ++T DV L + +A+LTPQGK F + ED I Sbjct: 4 ESRTVLRVHGAKAREFLQGLVTNDVARLEKGLVY-AALLTPQGKYRADFFLVPDGEDVLI 62 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 +++ + SL+ L YKLR+ V EI + VV T +F D R D Sbjct: 63 -DVEVALAVSLMQALTMYKLRTPV--EITETDVVVTRGT--GTPPEGAFADPR----DPR 113 Query: 127 LHRTW-GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L W G+ + A + + LR+ + + P T F +A + LNG+ KGCY Sbjct: 114 LG--WRGYAGQPAGEAD-WDALRVAACVPRAGVELTPDT-FILEAGFERLNGVDFKKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + D P G+ I+++ E GTL G A+A R D Sbjct: 170 VGQEVTARMKHKTELRK-GLARVAIDGHAPIGTKIVSNGKEAGTLFTQSGDSAIAYLRFD 228 Query: 246 KVDHAIKKGMALTVH 260 + + MA VH Sbjct: 229 RAGDDM---MAGDVH 240 >gi|157818919|ref|NP_001102297.1| hypothetical protein LOC363611 [Rattus norvegicus] gi|293351521|ref|XP_002727760.1| PREDICTED: hypothetical protein [Rattus norvegicus] gi|149052766|gb|EDM04583.1| rCG34648 [Rattus norvegicus] Length = 358 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 29/241 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57 L ++ ++V G A PFL ++T ++ T P A + L QG+ L ++ Sbjct: 53 LDGRALMRVRGPDASPFLLGLLTNELPLSGPPAGATQPSARAAYAHFLNVQGRTLYDVIV 112 Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + E T F+LE D S +L L YK+R V +E P V S Sbjct: 113 YGLPECTEEAPGFLLECDSSVLGTLQKYLTMYKIRRKVAVEPHPELHVWAVLPCAPQTSE 172 Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156 ++ ++ER +L+ RT ++ + D++ YH R GI + Sbjct: 173 AAPLEERVEATTMLIRDPRTARMGWRLLTQDGGPAVVPRGQLGDLQDYHIYRYQQGIPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 292 Query: 217 G 217 G Sbjct: 293 G 293 >gi|307109324|gb|EFN57562.1| hypothetical protein CHLNCDRAFT_143206 [Chlorella variabilis] Length = 338 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 36/289 (12%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE---DT 64 ++ IK+ G + +PFLQ I++ DV L P + +LT QG+ L + +E T Sbjct: 42 RTVIKLEGSNLMPFLQRIVSNDVTQLAPGGPPLYACVLTAQGRFLHDLFLHAVEGADVPT 101 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + + D ++R L+D L Y L +V + V++ SS ER AD Sbjct: 102 VLADCDAAQRRPLMDLLQHYSLHHSVSVSNAGKAYAVMAAFGGGIAGASS-APERAWAAD 160 Query: 125 ---------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +L R G + + Y R+ HG+ + +++ P + +D L Sbjct: 161 PRLPALGRRAVLPR--GSAPAPTASWRDYRAWRMQHGVGEGDSEMPSGEANPLECNLDAL 218 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE----IGTLG 231 G+S KGCY+GQE V+R+ R ++RKR M PS + D E +G + Sbjct: 219 RGLSFAKGCYVGQEGVARVHARGVVRKRLM---------PSHVFDVYDADESLSAVGRVR 269 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF-------PHWYK 273 VV G LA R+ + AI++ L V G+ + + P W++ Sbjct: 270 VVQGGLGLATIRLQQAMAAIREEKPLLVGGLEAGSGYAEIWPWRPEWWE 318 >gi|145356317|ref|XP_001422379.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582621|gb|ABP00696.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 306 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 31/291 (10%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILL--YFLISKIE 61 +L ++ ++V G A FLQ +T DV L A A LTP+GKI + ++ E Sbjct: 14 WLDTRAVVRVAGADAAAFLQGAVTNDVRALREGGDAAYCATLTPKGKIFADAFVRLAGSE 73 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DE 118 D F+L++DR K + L LR V IE + VV++ +S+ DE Sbjct: 74 SDEFLLDVDREKSSEFLRALRMLSLRKRVTIEDANEHRVVVASADADVGDSSARAVRRDE 133 Query: 119 RF---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 R ++ + +A + RI G+ + ++ + P + D L Sbjct: 134 RLEQLGFRGIVPASDAAWRDAVAD---AHARTRIALGVAEGASEL--ANALPLECNFDAL 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NG+S TKGCY+GQE +R + R ++RKR + P + +P + I + G VVG Sbjct: 189 NGVSFTKGCYVGQENTARQRFRGVVRKRIAPFVAIE--PGARAPSVGGKI-VNERGDVVG 245 Query: 236 KKALAIARIDKVDHAIKKGMAL--------------TVHGVRVKASFPHWY 272 AI D V ++ M+ G RV P W+ Sbjct: 246 DVIAAIEDEDAVLGLVRARMSFIRAHVAGEPGSAFRIADGARVGVEPPSWW 296 >gi|84500029|ref|ZP_00998295.1| aminomethyl transferase family protein [Oceanicola batsensis HTCC2597] gi|84391963|gb|EAQ04231.1| aminomethyl transferase family protein [Oceanicola batsensis HTCC2597] Length = 251 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 19/253 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEED 63 + + I+V G FLQ ++T D+ +++ G +A+LTPQGK++ FL+ + + + Sbjct: 5 NERRVIRVGGSDTFDFLQNLVTNDL----DRLSEGPVYAALLTPQGKLIADFLVLQ-DGE 59 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 ++++ + D L+ +L Y+LR++V IE I + D R Sbjct: 60 ALLVDVAEAFADPLVQRLNMYRLRADVRIEPTGIK----VRRGTGAAPEGAVADPRHP-- 113 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 L R +G ++ D + +R+ I + + P T + +A D LNG+ KG Sbjct: 114 -SLGWRLYGESD--GDDGTDFAAIRVAGVIPESGIELGPET-YILEAGFDRLNGVDFRKG 169 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 CY+GQEV +R++H+ +RK +I + P+G+ I + ++G L +A+A AR Sbjct: 170 CYVGQEVTARMKHKTELRK-GLIRVDVEGAAPAGTEIEREGKKVGILYTQSDGQAIAYAR 228 Query: 244 IDKVDHAIKKGMA 256 D++ + G A Sbjct: 229 FDRLAPGMTAGEA 241 >gi|189184098|ref|YP_001937883.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda] gi|189180869|dbj|BAG40649.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 19/282 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 L+N++ +++ G A FL I T +V+ A+ S IL+PQG+ L +FLI+ +T Sbjct: 7 LNNRAILELSGCDASNFLLRI-TTNVIPAANGEAKYSMILSPQGRFLFDFFLIN--NHNT 63 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSNSS--- 114 F ++ S +++L+ KL +KLRS V I ++ ++ S N H N++ Sbjct: 64 FFIDCLASIKNALLSKLHIFKLRSKVQINDVSDFYDIIYSQFYINDSNLHHLNLNTAKLV 123 Query: 115 --FIDERFS-IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 + D RF+ + LL + S+ Y + I D D + P + Sbjct: 124 TQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPPEYG 183 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEIGT 229 D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +P++ + IG Sbjct: 184 ADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPVMHNSNIIGY 243 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + +A+ R + I +TV ++K S P W Sbjct: 244 WCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285 >gi|268564264|ref|XP_002639061.1| Hypothetical protein CBG14872 [Caenorhabditis briggsae] gi|187027514|emb|CAP33284.1| hypothetical protein CBG_14872 [Caenorhabditis briggsae AF16] Length = 281 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 10/202 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + D Sbjct: 7 IKLPHRVILKLHGADTNAFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGTD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 LE ++ + L+ ++L Y+LR V EI V + Q T +S + D RFS Sbjct: 67 DVFLECSKANQSVLVKEILKYRLRKRV--EISETTDQVF-FEQISTDKSSEYRDPRFS-- 121 Query: 124 DVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R +G+ + +++ + + Y LR ++GI + + + + P A DLLN +SL Sbjct: 122 -NFGARVFGNPSSSEVSENREAYENLRRSNGIAEGAVEL--ADLLPFQANGDLLNMVSLD 178 Query: 182 KGCYIGQEVVSRIQHRNIIRKR 203 KGCYIGQE+ +R H +IR+R Sbjct: 179 KGCYIGQELTARTAHTGVIRRR 200 >gi|86136583|ref|ZP_01055162.1| aminomethyl transferase family protein [Roseobacter sp. MED193] gi|85827457|gb|EAQ47653.1| aminomethyl transferase family protein [Roseobacter sp. MED193] Length = 266 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 29/256 (11%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTF 65 + +++ G A FLQ +IT+DV KI +G +A+LTPQGK L F ++ ED Sbjct: 26 RKILRLSGADARDFLQGLITSDV----NKIDQGLVYAALLTPQGKYLADFFLAADGED-I 80 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L+ D + ++L+ +L Y+LR+ V I +++ G + + D R + Sbjct: 81 LLDADADQAEALMKRLTMYRLRAKVEITETDLKVKRGTGAA-------PAGALADPRHA- 132 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L R G ++ +D + L + H I + P + + ++ + LNG+ K Sbjct: 133 --ELGWRLIG--SEVGADESDWDALHVAHCIPRSGIELGPDS-YILESGFEALNGVDFRK 187 Query: 183 GCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 GCY+GQEV +R++H+ +RK R + ITG+ P GS I +GT+ +A+A Sbjct: 188 GCYVGQEVTARMKHKTELRKGLRVVEITGS---APVGSEITAGGKAVGTVFTQSNGQAIA 244 Query: 241 IARIDKVDHAIKKGMA 256 R D+ + G A Sbjct: 245 YLRFDRAKGEMTAGDA 260 >gi|99081825|ref|YP_613979.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] gi|99038105|gb|ABF64717.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] Length = 248 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 20/256 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 ++++ +++ G FLQ +++ DV K+ G +AILTPQGK L F ++ + Sbjct: 1 MADRRILRLEGPDTRSFLQGLVSNDV----NKVQDGLVYAAILTPQGKYLADFFLA-ADG 55 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D +L++ + D L+ +L YKLR+NV +E + + D R Sbjct: 56 DAVLLDVAEALADDLVKRLKMYKLRANVTLEETDLK----LRRGTGDAPEGALPDPRHP- 110 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L R +G ++ D + +R+ H I + + P + + + + LNG+ K Sbjct: 111 --ALGWRQYG--KETFDDGSDWDVIRVTHVIPETGIELTPDS-YLLEVGFERLNGVDFRK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQEV +R++H+ +RK + D P G+ I +G + G KA+A Sbjct: 166 GCYVGQEVTARMKHKTELRK-GLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYL 224 Query: 243 RIDKVDHAIK-KGMAL 257 R D+ A++ +G AL Sbjct: 225 RFDRAKGALEAEGTAL 240 >gi|109017947|ref|XP_001083460.1| PREDICTED: putative transferase C1orf69, mitochondrial [Macaca mulatta] Length = 357 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 41/304 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--------ARGSAILTPQGK----ILL 53 L ++ ++V G A PFL ++T ++ A + L QG+ ++L Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPLARAGYAHFLNVQGRTLYDVIL 112 Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHT 109 Y L EE F+LE D S + +L L Y++R V +E P + V+ S Sbjct: 113 YGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPS--SPEA 170 Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153 + N+ + E A +L+ R +E A D+ YH+ R G+ Sbjct: 171 YGNAP-LQESAGAAAILIRDPRTARMGWRLLTQDEGPALVSGGRLGDLWDYHQHRYLQGV 229 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L Sbjct: 230 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 289 Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P S G+ +LT + +G G LA+ +K+ + + V + AS Sbjct: 290 PASGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 348 Query: 269 PHWY 272 P W+ Sbjct: 349 PDWW 352 >gi|126725874|ref|ZP_01741716.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150] gi|126705078|gb|EBA04169.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150] Length = 247 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 15/247 (6%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTF 65 S Q F V G + FLQ+++T DV + +A+LTPQGK L +F+++ + D Sbjct: 4 SRQVF-AVGGADRVKFLQSLVTNDVEKAKDGLVY-TALLTPQGKYLFDFFMVA--QGDRI 59 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +++ D + +L +L+ YKLR++V IE P++ V N + D R + Sbjct: 60 LIDCDGEQAAALSGRLMMYKLRADVTIE--PLDLYVHRGND--LLPVDGYADPRHAALGW 115 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +R E+ A + + L I + + + + + + + + LNGI KGCY Sbjct: 116 RAYR-----EQPAQETPDWTALNIANLVPETGAELVSGEGYILEMNFEALNGIDFRKGCY 170 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+++R++H+ +RK +T D G I + IG L G +ALA R D Sbjct: 171 VGQEIMARMKHKTELRKGLARVT-VDGETSFGDEITSGGKVIGKLLTRAGDQALAYLRFD 229 Query: 246 KVDHAIK 252 ++ I+ Sbjct: 230 RIKADIQ 236 >gi|148555647|ref|YP_001263229.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] gi|148500837|gb|ABQ69091.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] Length = 222 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS LS+++ I++ G+ A FLQ ++T+DV P + G +LTPQGK L F++ Sbjct: 1 MSGTTLSDRALIRLSGQGARDFLQGLVTSDVAG-PLPVWAG--LLTPQGKALFDFIVWA- 56 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++ + + D+L +L+ Y+LR + I G+ + W + D R Sbjct: 57 DGDDLLIDCEAEQADALAKRLMLYRLRKPIAIARD--EGLAVHWAPD---GERGAPDPRL 111 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + L R W + A++ +H R G+ + + + DLLNG+S Sbjct: 112 AA----LGRRWIASADGAAE--GWHAHRRALGVPEGVAEIGSDRNLWLECNADLLNGVSF 165 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207 KGCY+GQE +R+ R + +R +++ Sbjct: 166 AKGCYVGQENTARMNWRAKVNRRLVML 192 >gi|74192523|dbj|BAE43049.1| unnamed protein product [Mus musculus] Length = 358 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57 L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++ Sbjct: 53 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 112 Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + E T F+LE D S +L L YK+R V +E P V S Sbjct: 113 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 172 Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156 ++ ++ER +L+ RT ++ + D++ YH+ R GI + Sbjct: 173 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELAARTHHTGVIRKRLFPVKLEGPLPAS 292 Query: 217 G 217 G Sbjct: 293 G 293 >gi|148675734|gb|EDL07681.1| RIKEN cDNA A230051G13 [Mus musculus] Length = 370 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57 L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++ Sbjct: 65 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 124 Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + E T F+LE D S +L L YK+R V +E P V S Sbjct: 125 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 184 Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156 ++ ++ER +L+ RT ++ + D++ YH+ R GI + Sbjct: 185 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 244 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S Sbjct: 245 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 304 Query: 217 G 217 G Sbjct: 305 G 305 >gi|30424663|ref|NP_776146.1| putative transferase C1orf69 homolog, mitochondrial precursor [Mus musculus] gi|81899610|sp|Q8CAK1|CAF17_MOUSE RecName: Full=Putative transferase CAF17 homolog, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|26332703|dbj|BAC30069.1| unnamed protein product [Mus musculus] gi|63102308|gb|AAH94909.1| RIKEN cDNA A230051G13 gene [Mus musculus] gi|74223337|dbj|BAE21556.1| unnamed protein product [Mus musculus] gi|123262723|emb|CAM17098.1| novel protein (4930543L23Rik) [Mus musculus] Length = 358 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57 L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++ Sbjct: 53 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 112 Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + E T F+LE D S +L L YK+R V +E P V S Sbjct: 113 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 172 Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156 ++ ++ER +L+ RT ++ + D++ YH+ R GI + Sbjct: 173 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 232 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 292 Query: 217 G 217 G Sbjct: 293 G 293 >gi|322698390|gb|EFY90160.1| aminomethyl transferase, putative [Metarhizium acridum CQMa 102] Length = 385 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 26/237 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGK----ILLYFL-- 56 L ++ + V G A FLQ I+TA++ LP A S +L G+ I +Y Sbjct: 42 LPSRQLLSVSGPEATKFLQGIVTANMTNAEGLPRTDAFYSGLLNATGRVVHDIFIYPFRQ 101 Query: 57 ----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTF 110 + ++D +++E D + L + YKLR+ V + P + V +W++ Sbjct: 102 GGSGLQAKQDDGYLIEADAGEVARLAQLIKRYKLRAKVTVRNVPPDEASVWQAWDEASPL 161 Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVDPNTDFL 161 ++ S + R A L +R + K AS Y R HG+ + + L Sbjct: 162 EIAASESRVVLRDPRAPGLGYRIVQLSHKAPELDVDASTEDAYTIRRYLHGVAEGQDEIL 221 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216 P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR P +I G D PP Sbjct: 222 REQALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYGEDKAPPQ 278 >gi|254455916|ref|ZP_05069345.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus Pelagibacter sp. HTCC7211] gi|207082918|gb|EDZ60344.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus Pelagibacter sp. HTCC7211] Length = 297 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 28/297 (9%) Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 + +VY L +++ + V G+ A FLQ +I+ DV + + +++L+PQGK L F+I K Sbjct: 3 IKNVYILDDRAILYVNGEDAKEFLQNLISNDVNKVSDTNSCFTSLLSPQGKFLFEFIIIK 62 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---------------------EIQPIN 98 + FI++ ++ + D L +L YKLRS V I E Q + Sbjct: 63 -HKSGFIIDCEKPQADGLFKQLSIYKLRSKVEILNLSNEFVVAAFSHEKFLTFDEAQDVP 121 Query: 99 GVVLSWNQEHTFSN--SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 G L + ++ F + + + R I L+ + E S + Y+ GIV Sbjct: 122 GFTLKYREDPIFLDPRNKQLGARLIINLEKLYLSLKKLELQDSKLHDYYSYCHKLGIVPK 181 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I Sbjct: 182 DLNKLQNKLFGIECNYEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPINLVKGELTE 241 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 G I + EIG V+ +K A I D + + + +K P W K Sbjct: 242 GESIYHKEKEIGK---VLIEKDYPFALIKFQDVNLSENIDFNTKDASIKIEKPDWIK 295 >gi|322707198|gb|EFY98777.1| aminomethyl transferase, putative [Metarhizium anisopliae ARSEF 23] Length = 379 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 20/231 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGK----ILLYFLIS 58 L ++ + V G A FLQ IITA++ LP A S L G+ I +Y Sbjct: 42 LPSRQLLSVSGPEATKFLQGIITANMTNAEGLPRTDAFYSGFLNATGRVVHDIFIYPFRQ 101 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTF---SNS 113 ++D +++E D + + YKLR+ V + P + V +W+ ++ Sbjct: 102 AKQDDGYLIEADAGEMARFAKLIKRYKLRAKVTVRNVPPDEASVWQAWDDASPLDIAASE 161 Query: 114 SFIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 S + + A L HR N K AS + Y R G+ + + L P Sbjct: 162 SRVVLKDPRAPGLGHRIVQLNHKAPELDVDASTEEAYTIRRYLQGVAEGQDEILREQALP 221 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216 ++ M+L+NGI KGCY+GQE+ R +HR ++RKR P I D PP Sbjct: 222 LESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCAIYSEDKAPPQ 272 >gi|209964961|ref|YP_002297876.1| aminomethyltransferase, putative [Rhodospirillum centenum SW] gi|209958427|gb|ACI99063.1| aminomethyltransferase, putative [Rhodospirillum centenum SW] Length = 298 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 22/290 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + + V G + FLQ +++ DV + A +A+LT QGK L F I+ + Sbjct: 8 AVPLPQRGVLAVGGPDRVSFLQGLVSNDVARVTEGRAVWAALLTAQGKYLHDFCIAALG- 66 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLS---------WNQ 106 D +L+ + ++RD L+ +L Y+LR+ V +E + + G Sbjct: 67 DALLLDCEAARRDDLLRRLRPYRLRAQVTLEDRTDTLAVSALVGTAAPAALELPAEPGAA 126 Query: 107 EHTFSNSSFIDERFSIADV--LLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161 ++F+D R + + +L R G + R+ GI D + D + Sbjct: 127 RTVAGGTAFVDPRHAALGLRLILPREGGATALAGFRQGGEADWDSARLALGIPDGSRDLV 186 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 P + D L G++ KGC++GQE+ +R ++R +IRKR + + LP G+P+ Sbjct: 187 PEKSILLENGFDELQGVAWDKGCWMGQELTARTRYRGLIRKRLLPVEVCGPLPEPGTPVF 246 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + E G + G + LA+ R+++V+ A +G++ + P W Sbjct: 247 LGEREAGEMRSGHGGQGLALLRLEEVERAAAEGLSFRAGEATLSPRRPSW 296 >gi|110679047|ref|YP_682054.1| aminomethyl transferase family protein, putative [Roseobacter denitrificans OCh 114] gi|109455163|gb|ABG31368.1| aminomethyl transferase family protein, putative [Roseobacter denitrificans OCh 114] Length = 245 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I + D Sbjct: 1 MTKRRILRLTGTDVSEFLQGLITNDIKGVETGLVY-AAMLTPQGKFLADFFICR-SGDAM 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ S D L+ +L YKLR++V IE ++ + D R Sbjct: 59 LIDVAESHGDMLMQRLNMYKLRADVTIEATDLH----LHRGLGDPPEGAMADPRHP---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + D + LR+ H I + + P T F + + + G+ KGCY Sbjct: 112 LGWRRYADAPQT-DDSTDWTALRVEHQIPEAGIELTPDT-FILEVGFERIAGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK ++ P G+ I + G L G +ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSIAGPAEP-GAEITANGKPAGVLHSRAGDRALAYLRYD 228 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 229 RATGPMQAGAA 239 >gi|73975454|ref|XP_539326.2| PREDICTED: similar to CG8043-PA [Canis familiaris] Length = 276 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 104/254 (40%), Gaps = 31/254 (12%) Query: 45 LTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------- 96 L P Y L E F+LE D + +L L YK+R V +E P Sbjct: 23 LGPHQHCQPYGLPELDEAPAFLLECDSAVLGALQGHLALYKIRRKVKVEPCPELRVWAVL 82 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKT 143 G V W Q +N + I R + R E +A D++ Sbjct: 83 PSSPEDAGGAVPLWEQ----ANGATILTRDPRTACMGWRLLTQEEGLALVPRGQLGDLRD 138 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 YH R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR Sbjct: 139 YHRHRYRQGVPEGIRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKR 198 Query: 204 PMIITGTDDLPPSG-SPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALT 258 + + LP SG +P T +E G + G LA+ R +K+ + + + Sbjct: 199 LFPVQLSGPLPASGITPGTTVLMESGQVAGKYRAGQGDVGLALLRSEKIRGPLHIRTSES 258 Query: 259 VHGVRVKASFPHWY 272 V V S P W+ Sbjct: 259 GQ-VAVTVSVPDWW 271 >gi|254487881|ref|ZP_05101086.1| glycine cleavage system T protein, aminomethyltransferase [Roseobacter sp. GAI101] gi|214044750|gb|EEB85388.1| glycine cleavage system T protein, aminomethyltransferase [Roseobacter sp. GAI101] Length = 247 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIE 61 ++++ +K+ G + FLQ +IT D+ K+ +G +A+LTPQGK ++ +FL++ E Sbjct: 1 MNDRRILKLTGADTLDFLQGLITNDI----RKLEQGPIYAALLTPQGKFMVDFFLVAAGE 56 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 +L++ D+L+ +L Y+LR++V I + + + D R + Sbjct: 57 --AVLLDVAEPFADALVQRLNMYRLRADVQIAATEL----YLHRSLGAAPDDGYSDPRDA 110 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 +R ++ D + LR+ H I + + P + F + + LNG+ Sbjct: 111 QMGWRAYRDVPQSD----DTTDWDALRVAHSIPENGIELTPDS-FILEMGFERLNGVDFR 165 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV +R++H+ +RK I + P S G+ I D GT+ G ALA Sbjct: 166 KGCYVGQEVTARMKHKTELRKGLAQINIS--APVSVGADITADGKPAGTVLTQSGTSALA 223 Query: 241 IARIDKVDHAIK 252 R D+ A++ Sbjct: 224 YLRFDRAKQAMQ 235 >gi|71985951|ref|NP_492346.2| hypothetical protein F39H2.3 [Caenorhabditis elegans] gi|54110900|emb|CAB03089.2| C. elegans protein F39H2.3, confirmed by transcript evidence [Caenorhabditis elegans] gi|54110919|emb|CAB03184.2| C. elegans protein F39H2.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 280 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 26/275 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + D Sbjct: 7 IKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQTQNGLAAFLLNTKGRIVEDVLLWRRGTD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 LE + + L ++L Y+LR V I + + + + E + D RFS Sbjct: 67 DLFLECSKENKTILTKEILKYRLRKQVEI-TESSDQIFFT---EDVSDKQAHRDPRFSGF 122 Query: 124 DVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R +G+ + +++ + + Y LR + GI + + + + + P A DLLN +SL Sbjct: 123 GA---RVFGNPSSSEVSENREKYENLRRSAGIAEGSQEL--AELLPFQANGDLLNMVSLD 177 Query: 182 KGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK--- 236 KGCY+GQE+ +R H +IR+R P G + G+ +L D + +G ++ Sbjct: 178 KGCYVGQELTARTAHTGVIRRRILPFECEGQVKI---GAEVL--DEKKNKVGKIISSDTT 232 Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + L I ++ K LT GV + A P W Sbjct: 233 RCLGILQLSSF-----KSQKLTADGVSLTAKQPEW 262 >gi|114763433|ref|ZP_01442840.1| aminomethyl transferase family protein [Pelagibaca bermudensis HTCC2601] gi|114543971|gb|EAU46982.1| aminomethyl transferase family protein [Roseovarius sp. HTCC2601] Length = 244 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 20/244 (8%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTF 65 S + ++V G A FLQ ++T DV L + +A+LTPQGK +FL+ K E+ Sbjct: 3 SERKVLRVSGPEAEQFLQGLVTNDVAGLKDGLVY-AAMLTPQGKYRADFFLVPKGED--I 59 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++D + L L YKLRS V I ++ V E +FID R Sbjct: 60 LIDVDAALAPDLQRMLTMYKLRSKVEI-VETDIAVTRGTGPE---PEGAFIDPRDP---- 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 W + + + LR+ + + + P T F +A + LNG+ KGCY Sbjct: 112 --RMGWRGYDGQTGEEADWDALRVAACVPESGVELTPDT-FILEAGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 +GQEV +R++H+ +RK + ++G+ P GS IL + GTL +A R Sbjct: 169 VGQEVTARMKHKTELRKGLAQVDVSGS---APVGSDILAGEKTAGTLYTQAEGHGIAYLR 225 Query: 244 IDKV 247 D+ Sbjct: 226 FDRA 229 >gi|163747204|ref|ZP_02154559.1| aminomethyl transferase family protein, putative [Oceanibulbus indolifex HEL-45] gi|161379479|gb|EDQ03893.1| aminomethyl transferase family protein, putative [Oceanibulbus indolifex HEL-45] Length = 248 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 28/250 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIE 61 ++ + +++ G FLQ I+T D+ K+ +G +A+LTPQGK + +FLI+ Sbjct: 1 MTTRRILRLTGPDTRDFLQGIVTNDIA----KLDQGPVYAALLTPQGKYMADFFLIAA-- 54 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 D +L++D S D L +L YKLR+ V IE ++ H + + D + Sbjct: 55 GDGVLLDVDESLGDMLTQRLSMYKLRAKVTIEPTELH--------LHRGTGPAPED---A 103 Query: 122 IADVLLHRTWG----HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +AD H G + D ++ LR+ H I + + P T F +A +D +NG Sbjct: 104 VADPR-HPEMGWRAYRDTPQTDDTTDWNALRVAHLIPETGVELTPDT-FILEAGLDRING 161 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK + P G+ I + GTL + Sbjct: 162 LDFRKGCYVGQEVTARMKHKTELRKGLTRVDVKGSAAP-GTAITAEGKPAGTLYTQADGQ 220 Query: 238 ALAIARIDKV 247 ALA R D+ Sbjct: 221 ALAHLRFDRA 230 >gi|126462652|ref|YP_001043766.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17029] gi|126104316|gb|ABN76994.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17029] Length = 255 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57 M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + FI DR D + +L Y+LR++V +I P++ V+ E + D Sbjct: 59 VRTGGRLFIDISDRLA-DPTLKRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R L R +G + A ++ + +R+ H I + + +P + ++ + L+G Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G + Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227 Query: 238 ALAIARIDKVDHAIKKGMA 256 A+A R D+ + ++ G A Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246 >gi|67906639|gb|AAY82733.1| hypothetical protein [uncultured bacterium eBACmed86H08] Length = 295 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 44/303 (14%) Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 + VY L +++ + + G + +LQ +I+ D+ + + +++L+PQGK L FL+ K Sbjct: 3 LEKVYILDDRAILYINGPDSDKYLQNLISNDIEKVNENKSCFASLLSPQGKFLFDFLVLK 62 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 +D + L+ ++ D L KL+ YKLRS V I VV +++ + S DE Sbjct: 63 -HKDGYFLDCEKKIVDQLYKKLVMYKLRSKVEILNLSNEFVVAAFSYDKFLSIEGAKDE- 120 Query: 120 FSIADVLLHRTWGHNEK---------------IAS----------------DIKTYHELR 148 L T+ HNE IA+ I YH+L Sbjct: 121 -------LGYTFKHNEDHVLLDPRNKKLGGRIIANLEKLYMSLKKMKLKSSKIDEYHKLS 173 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 GI N D L +F + LN I KGCY+GQE SRI++++ + KR + + Sbjct: 174 FELGIPQSNMDQLQEKLFGIECNFVELNAIDFKKGCYVGQENTSRIKNKDKLNKRLLPLQ 233 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + PI+++++EIG + ++ + A+ + + K + + Sbjct: 234 VKKGSISNNDPIISNNVEIGKV-LIANTFSFALIKFKNKEFEYNKEFKCGEANIEILK-- 290 Query: 269 PHW 271 P+W Sbjct: 291 PNW 293 >gi|296537311|ref|ZP_06899188.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957] gi|296262361|gb|EFH09109.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957] Length = 362 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 5/226 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ ++V G+ + FLQ +++ DV A +A+LTPQGK L F I D Sbjct: 85 LPDRAVLEVTGEDRLAFLQGLVSNDVTQAAPGRAVWAALLTPQGKWLADFFIVA-GADRL 143 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFSIAD 124 +L+ S+ +L +L ++LRS V I ++ V+ W + + D R A Sbjct: 144 LLDTAASQAGALAQRLSRFRLRSRVAIALREDLAVLAGWGESLPPEGVLAAPDPRLPEAG 203 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 R + I Y R++ G+ D D P +A D L GIS +KGC Sbjct: 204 ---WRAILNASAIPPGDGDYARHRLSLGLPDGAPDLEPEKSVLLEAGFDELGGISWSKGC 260 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 Y+GQE+ +R ++R ++++R + + LP G+P+L D +G + Sbjct: 261 YMGQELTARTRYRGLLKRRLVPVAVEGPLPAPGTPVLRDGATVGEM 306 >gi|196002527|ref|XP_002111131.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens] gi|190587082|gb|EDV27135.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens] Length = 325 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 27/290 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EE 62 L +S +++ G A FLQ +IT D+ T + A + +L P+G+IL L+ K +E Sbjct: 36 LLERSLLRISGPDAATFLQGLITNDINTT--EPASYAMLLNPKGRILYDILLYKNRNDDE 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER-FS 121 + ++LE D ++ + FYKLRS V I + + + W + + + +F +E Sbjct: 94 EYYLLECDVRVNTAIENHCKFYKLRSKVDI-VNVDQELAVWWAKYNDRESLAFKNEPILR 152 Query: 122 IADVLLHR--------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 D L + + N I + + Y + R+ GI + ++ + P Sbjct: 153 TKDPRLQKLGERIIIPRHKNLSEYAQN-LINVNYQEYVDDRMKLGICEGVSEVITGESLP 211 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG--TDDLPPSGSPILTD 223 + +D L+G+ KGCY+GQE+ +R H +IRKR P+I D+ GS +L D Sbjct: 212 LEYNLDYLDGVKFDKGCYLGQELTARTYHTGVIRKRLMPVIFLNPIDDNAAFLGSTVLND 271 Query: 224 -DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + G L + GK +A+ RI + V + AS P W+ Sbjct: 272 KNKNCGKLRALSGKYGVALLRIADSLSGLLSVKTTNNTEVTLTASKPLWW 321 >gi|126335964|ref|XP_001376859.1| PREDICTED: similar to chromosome 1 open reading frame 69 [Monodelphis domestica] Length = 357 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 50/310 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-------------QGK-- 50 L ++ ++V G FL ++T + LP + G A P QG+ Sbjct: 50 LRDRDALRVHGPDTESFLLGLVTNE---LPRPVPEGGATSEPAPAPAHYAHFLNVQGRTL 106 Query: 51 --ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++LY L EE F+LE+D S ++ + L YK+R V I P + Q Sbjct: 107 YDVILYRLHEHQEEPHFLLEVDSSVSGAVQNHLKLYKIRRKVSISPCPDLSLWAVLPQTA 166 Query: 109 TFSNSSFIDERFSI---------ADVLLHRTWGHNEKIASDI---------KTYHELRIN 150 +++ + E+ A + R H E +A ++ + YH+ R Sbjct: 167 AEASAKPLLEKGGKPLVLTPDPRAACMGWRLIIHKEDLAQEVIPKTQIRHSQDYHKHRYQ 226 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + D P P ++ + +NG+S TKGCYIGQE+ +R QH +IRKR I + Sbjct: 227 KGIPEGVRDLPPGVALPLESNLTFMNGVSFTKGCYIGQELTARTQHMGVIRKRLFPIRFS 286 Query: 211 DDLP----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---V 262 LP +G+ +LT+ + G G +A+ R ++ IK + + G V Sbjct: 287 APLPEEGISAGANVLTEAGKAAGKYRAREGDLGIALLRTER----IKGPLHIKTSGGQCV 342 Query: 263 RVKASFPHWY 272 + S P W+ Sbjct: 343 SIIPSVPDWW 352 >gi|71083326|ref|YP_266045.1| GcvT-like aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062439|gb|AAZ21442.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] Length = 295 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 28/294 (9%) Query: 2 SSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +VY L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K Sbjct: 4 QNVYILEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIKH 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFI-- 116 + FI + ++S+ ++L +L YKLRS V I VV ++N+E F S I Sbjct: 64 KSGYFI-DCEKSQTEALFKQLSVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAG 122 Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 R I L+ + E S I Y++L GI N Sbjct: 123 NTIKYREDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPIAEYYKLSHQLGIPQKN 182 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I + Sbjct: 183 MNELQNKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQD 242 Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I D EIG V+ A I +D + ++K P W Sbjct: 243 DLIYNGDFEIGK---VLISNEYPFALIKYLDDNFNQENEFKSKNAKLKIKIPSW 293 >gi|163734033|ref|ZP_02141474.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] gi|161392569|gb|EDQ16897.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] Length = 245 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I K D Sbjct: 1 MTKRRILRLTGTDVTEFLQGLITNDIKGVETGLVY-AAMLTPQGKYLADFFICK-SGDAI 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDERFSI 122 ++++ S D L +L YKLR++V IE ++ G+ + D R Sbjct: 59 LIDVAESHGDMLAQRLSMYKLRADVSIETTDLHLHRGI-------GDPPAGALPDPRHP- 110 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L R + + + LR+ H I + + P T F + + + G+ K Sbjct: 111 --ALGWRCYADTPQTDD-TTDWTALRVAHQIPETGIELTPDT-FILEVGFERIAGVDFRK 166 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQEV +R++H+ +RK ++ T P G+ I + +G L G KALA Sbjct: 167 GCYVGQEVTARMKHKTELRKGLAQVSITGPAEP-GAEITANGKAVGVLQSRAGDKALAYL 225 Query: 243 RIDKVDHAIKKGMA 256 R D+ ++ G A Sbjct: 226 RYDRATGPMQAGAA 239 >gi|77463816|ref|YP_353320.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides 2.4.1] gi|77388234|gb|ABA79419.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides 2.4.1] Length = 255 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57 M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + FI DR D + +L Y+LR++V +I P++ V+ E + D Sbjct: 59 VRTGGRLFIDISDRLA-DPTLKRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R L R +G + A ++ + +R+ H I + + +P + ++ + L+G Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G + Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227 Query: 238 ALAIARIDKVDHAIKKGMA 256 A+A R D+ + ++ G A Sbjct: 228 AIAHVRHDRAEGEMRAGEA 246 >gi|332558691|ref|ZP_08413013.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N] gi|332276403|gb|EGJ21718.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N] Length = 255 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57 M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + FI DR +L +L Y+LR++V +I P++ V+ E + D Sbjct: 59 VRTGGRLFIDISDRLAEPTL-KRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALRD 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R L R +G + A ++ + +R+ H I + + +P + ++ + L+G Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G + Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227 Query: 238 ALAIARIDKVDHAIKKGMA 256 A+A R D+ + ++ G A Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246 >gi|194740816|ref|XP_001952886.1| GF17494 [Drosophila ananassae] gi|190625945|gb|EDV41469.1| GF17494 [Drosophila ananassae] Length = 281 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 109/258 (42%), Gaps = 37/258 (14%) Query: 44 ILTPQGKILLYFLISKIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL 102 L G++L +I + DTF++E DR L Y++R + I+I ++ Sbjct: 18 FLNKSGRVLYDTIIYRTNNRDTFLVECDREASAEFRRHLRTYRVRKS--IDIDSVDDEYS 75 Query: 103 SW-------NQEHTFSNSSFI---DERFSIADV------------LLHRTWGHNE---KI 137 +W T N D R S L+ W +NE Sbjct: 76 TWVMFSPKSEPVPTSPNPDLFVSPDARLSSLGTRILAPTDMNWSQLVKGYWRNNEFSASP 135 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 AS+ Y LR G+ + + + P FP +A D L+G+S KGCY+GQE+ +RI H Sbjct: 136 ASEECNYQLLRYEQGVGEGSLELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARIHHS 195 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKG 254 +IRKR M I T P GS + LG V G + +A+ RI++V + Sbjct: 196 GVIRKRYMPIRLT---APIGSNKDVTSVAGAKLGRVCGSAHNRGVALLRIEQV---LNGR 249 Query: 255 MALTVHGVRVKASFPHWY 272 L V G R A P W+ Sbjct: 250 QELMVDGERCYADRPQWW 267 >gi|91762244|ref|ZP_01264209.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718046|gb|EAS84696.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] Length = 295 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 28/294 (9%) Query: 2 SSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +VY L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K Sbjct: 4 QNVYILEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIKH 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFI-- 116 + FI + ++S+ ++L +L YKLRS V I VV ++N+E F S I Sbjct: 64 KSGYFI-DCEKSQTEALFKQLGVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAG 122 Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 R I L+ + E S I Y++L GI N Sbjct: 123 NTIKYREDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPITEYYKLSHQLGIPQKN 182 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I + Sbjct: 183 MNELQNKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQD 242 Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I D EIG V+ A I +D + ++K P W Sbjct: 243 DLIYNGDFEIGK---VLISNEYPFALIKYLDDNFNQENEFKSKNAKLKIKIPSW 293 >gi|221639671|ref|YP_002525933.1| glycine cleavage T protein [Rhodobacter sphaeroides KD131] gi|221160452|gb|ACM01432.1| Glycine cleavage T protein [Rhodobacter sphaeroides KD131] Length = 255 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57 M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F + Sbjct: 1 MPGEIATDRKLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + FI DR +L +L Y+LR++V +I P++ V+ E + D Sbjct: 59 VRTGGRLFIDISDRLAEPTL-KRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R L R +G + A ++ + +R+ H I + + +P + ++ + L+G Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G + Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227 Query: 238 ALAIARIDKVDHAIKKGMA 256 A+A R D+ + ++ G A Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246 >gi|119713296|gb|ABL97361.1| putative aminomethyltransferase [uncultured marine bacterium HF10_45G01] Length = 296 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 28/297 (9%) Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 + +VY L++++ + + G+ A FLQ +I+ D+ + + S++LTPQGK L F+I K Sbjct: 3 IKNVYILNDRAILYINGEDAKEFLQNLISNDLNKVSDAYSCFSSLLTPQGKFLYEFIIVK 62 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--- 114 + ++L+ ++ + + L +L YKLRS V I VV +++ E TF + Sbjct: 63 -HKSGYLLDCEKPQAEELFTQLSLYKLRSKVEILNLSNEFVVAAFSHEKFLTFDTAKDQS 121 Query: 115 -----------FIDERFSIAD----VLLHRTWGHNEKIA---SDIKTYHELRINHGIVDP 156 F+D R + L + + +K+ +++K Y+ L + GIV Sbjct: 122 GFTIKYREDPIFLDPRNKQLGARLIINLEKLYLSLKKLNLHDANLKEYYSLSHSLGIVPK 181 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + L +F + + LNGI KGCY+GQE +RI+ +N + KR I Sbjct: 182 DLNKLKEKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLFPINVISGKLHE 241 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 G I +++EIG V+ A I ++ + + + P W K Sbjct: 242 GESIYNNEVEIGK---VLIDSDYPFALIKYLNENFDEKANFKTKEASINVNKPDWIK 295 >gi|40063600|gb|AAR38389.1| glycine cleavage system T protein [uncultured marine bacterium 582] Length = 252 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 13/252 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 Y ++ ++ G FLQ ++T DV P + SAILTPQGK + F + + +E Sbjct: 3 YTRDRHIFEIRGHDRAGFLQGLVTNDVSQTPQALTY-SAILTPQGKFITDFFLFQ-DEKA 60 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +++ S +L +L YKLR+ V I+ P+ V + S D Sbjct: 61 IYMDVADSAAPALSTRLNMYKLRAEVTIDDSPLK-VFCGTGSAPQGAKSDPRDRS----- 114 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R +G E+ D + LR+ I + + + + L+G+ KGC Sbjct: 115 -LGWRLYG--ERSGDDGSDWTALRVAACIPAVTIELTADSYILENGF-ERLHGVDFKKGC 170 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y+GQE+ +R++H+ +RK + D P+G+ I+ D +G L G LA R Sbjct: 171 YVGQEITARMKHKATLRK-GLAQVRVDGKAPTGTDIVADGKNVGVLYSQSGGLGLAYLRF 229 Query: 245 DKVDHAIKKGMA 256 D+ ++ A Sbjct: 230 DRATDKMQAASA 241 >gi|157110240|ref|XP_001651016.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti] gi|157110242|ref|XP_001651017.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti] gi|108878785|gb|EAT43010.1| conserved hypothetical protein [Aedes aegypti] gi|108878786|gb|EAT43011.1| conserved hypothetical protein [Aedes aegypti] Length = 341 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 133/312 (42%), Gaps = 60/312 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-----ILTPQGKILLYFLISKI 60 L ++S + V G A+PFLQ +IT D+ L RGS L G++L LI ++ Sbjct: 37 LESRSILGVRGSDAVPFLQGLITNDMNHL----LRGSTSMYAMFLNTSGRVLYDSLIYRV 92 Query: 61 EEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--- 114 +E F++E D S + L L +++R V I + V Q T S Sbjct: 93 DEKVGQHFLVECDTSVVEQLAKHLNLFRVRKKVEITKTDMKIWVAFTAQNSTHDQSPKIA 152 Query: 115 -----------FIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------ELRIN 150 F D R L +R ++ + +D+KT+ + R + Sbjct: 153 LKKADINGTLIFKDARLP---ELGYRLLTNSSTVLNDLKTHFSDEIDSPQNGSFVQHRYS 209 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208 GI + + P FP + D L+G+S KGCYIGQE+ +R H +IRKR P+I Sbjct: 210 LGIGEGVINLPPGKCFPLENNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPLIFD 269 Query: 209 GTDDLPPSGSPILTDDIEIGTL-GVVVGKK-------ALAIARIDKVDHAIKKGMALTVH 260 P +L +D EI T+ G VGK L + RI+KV I + + + Sbjct: 270 -----QPVDCGLLPEDAEIKTMEGQTVGKLRGYHKTFGLGLLRIEKV---ISSQLMIAGN 321 Query: 261 GVRVKASFPHWY 272 K P W+ Sbjct: 322 TYHCKTFKPDWW 333 >gi|321463826|gb|EFX74839.1| hypothetical protein DAPPUDRAFT_199709 [Daphnia pulex] Length = 326 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 12/214 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLI-SKIEE 62 L ++ +KV G A P+LQ ++T D+ L L QG+IL +I S E Sbjct: 32 LKGRAIVKVSGVDAGPYLQGLMTNDIKHLDEDNNPNMYCMFLNRQGRILYDAIIHSSKES 91 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFS 121 ++++E D +SL L +++R V+I I+ + VL SN + Sbjct: 92 GSYLIECDAECSESLAKHLTMFRVRRKVVISIEETLKPWVLFDQPPEDLSNEVILARDPR 151 Query: 122 IADVLLHRTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + ++ N+ ++ IK Y ELR G+ + + D P T FP + D Sbjct: 152 VKELGWRVLVDSNKSLSHLIKNLCVDNTDRYTELRYKLGVGEGSPDMPPGTCFPLECNCD 211 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L+G+S KGCY+GQE+ +R H + RKR M + Sbjct: 212 YLHGVSFHKGCYLGQELTARTYHTGVTRKRLMPV 245 >gi|212533241|ref|XP_002146777.1| aminomethyl transferase, putative [Penicillium marneffei ATCC 18224] gi|210072141|gb|EEA26230.1| aminomethyl transferase, putative [Penicillium marneffei ATCC 18224] Length = 457 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 61/293 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT------LPYKIARGSAILTPQGKIL---LYFL 56 L+N+S I + G + FLQ +IT ++L P +I SA L QG++L + Sbjct: 51 LTNRSLIAISGADSTSFLQGMITQNMLMGKEPVRAPRRIGTYSAFLNSQGRVLHDVFIYP 110 Query: 57 ISK---------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 I+K +E +++E+D+S+ +L+ L +KLR+ + + + V +WN Sbjct: 111 ITKGSLGHTNDSTDEAAWLIEVDKSEVTNLMKHLKKHKLRAKLTLRALEEGEQSVWAAWN 170 Query: 106 Q------------EHTF-----SNSSF----IDERF----------SIADVLLHRTWGHN 134 + E F N SF ID R D+ +H + Sbjct: 171 ESAERPRWAAYNLESDFPSQLSDNESFVVGCIDTRAPGFGTRYVTPGAEDLQVHLS-EET 229 Query: 135 EKIASDI--KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 + + S++ +TY RI HG+ + + + + P + MD+ I KGCY+GQE+ Sbjct: 230 KILGSEVGLETYKLRRILHGVAEGQQEIIRESSLPMECNMDVSQAIDFRKGCYVGQELTI 289 Query: 193 RIQHRNIIRKR--PMIITGTDD--LPPSGSPILTD---DIEIGTLGVVVGKKA 238 R H ++RKR PM + G D+ L S S ++ D DI G + +KA Sbjct: 290 RTHHTGVVRKRILPMQLYGIDENTLTSSASALIYDPSTDIPQPPTGANISQKA 342 >gi|156540479|ref|XP_001600004.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 365 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 58/323 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKI 60 S V L ++ +++ G FLQ +IT D+ L A S L +G++L +I K Sbjct: 33 SLVQLDQRTLLRLSGDQVSDFLQGLITNDMRHLKEGAASIYSVFLNIKGRVLYDAIIYKT 92 Query: 61 E-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------NQEH 108 + E F +E D S +SL L YKLR V EI + + W +Q+ Sbjct: 93 QDEKVFYVECDSSIVNSLSKHLKMYKLRRKV--EIHTEDNSMKVWTAYDPDIVSHVDQKE 150 Query: 109 TFSNSSF-----------------IDERFSIAD---------VLLHRTWGHNEKI----- 137 S+F +D F +D +L T +E I Sbjct: 151 VEKKSNFEGKIFPCGASDSTSSKLVDNIFIYSDPRLYQLGLRILTQSTVTCDEIIKQLEP 210 Query: 138 ----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + +Y E R G+ + D P T FP + D L+G+S KGCYIGQE+ +R Sbjct: 211 NVTTQQNASSYREFRYKLGVGEGVQDLPPGTSFPLEINCDYLHGVSFHKGCYIGQELTAR 270 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDH 249 H ++RKR M ++ D + P++ DD G +VGK K + + ++ Sbjct: 271 THHTGVVRKRLMPLS-FDKVYE--KPLMYDDQITNEAGKIVGKIRGQKGIFGLGLIRIAD 327 Query: 250 AIKKGMALTVHGVRVKASFPHWY 272 A+ + LTV +K PHW+ Sbjct: 328 ALASKI-LTVGDCTLKVVKPHWW 349 >gi|294678627|ref|YP_003579242.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003] gi|294477447|gb|ADE86835.1| glycine cleavage T protein-2 [Rhodobacter capsulatus SB 1003] Length = 247 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 27/250 (10%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIEEDTFILEI 69 + G+ FLQ +++ D+ ++A G +A+LTPQGK L +FLI++ E +L+I Sbjct: 7 ITGQDREHFLQGLVSNDL----RRLAEGPLYAALLTPQGKYLADFFLIARGE--AILLDI 60 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + + ++ + +L Y+LR++V I ++ + + D R H Sbjct: 61 EAAIAEATVARLNMYRLRADVAIAPSALS----VFCGTGPAPEGALSDPR--------HP 108 Query: 130 TWG---HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 G + ++ D + LR+ H I + P T + +A + L+G+ KGCY+ Sbjct: 109 ELGWRLYGDRDGDDGSDWDALRVAHLIPATGIELTPET-YILEAGFERLHGVDFRKGCYV 167 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 GQEV +R++H+ +RK ++ P G+PI +GTL G KALA R+D Sbjct: 168 GQEVTARMKHKTELRK-GLVQLAISGAAPVGTPIGAGGKTVGTLYTQSGGKALAQLRLDA 226 Query: 247 VDHAIKKGMA 256 ++ ++ G A Sbjct: 227 LEGPMQAGEA 236 >gi|46125843|ref|XP_387475.1| hypothetical protein FG07299.1 [Gibberella zeae PH-1] Length = 396 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 36/242 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLIS---- 58 L+++ I V G + FLQ IITA+V T LP A LT G++L + Sbjct: 47 LTSRRLISVTGPDSAKFLQGIITANVTTKDGLPRTDGFYGAFLTATGRVLYDVFVYPNHN 106 Query: 59 ----KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVL 102 EE +++E+D +L + YKLR+ + + + NG Sbjct: 107 SPGFSSEEPAYLIEVDAGHAPTLAKHIKRYKLRAKLTVRLLGEDEASVWHAWDDSNGA-- 164 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHR--TWGHNEKIASDIKTYHEL----RINHGIVDP 156 +W+ +N S D R A L +R N KT E R +GI + Sbjct: 165 NWDSIVKLTNLSLQDPR---APGLGYRLLQLDQNTPQVDLEKTTEEAYTIRRYINGIAEG 221 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214 + P + MD++NGI KGCY+GQE+ R +HR ++RKR P +I T+ P Sbjct: 222 QDEISKEHALPQETNMDIMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYETEHAP 281 Query: 215 PS 216 P+ Sbjct: 282 PT 283 >gi|291241889|ref|XP_002740842.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 369 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 27/230 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKI---- 60 L N++ I+V G+ A LQ +IT D L + + + +L QG++L +I I Sbjct: 54 LINRNIIRVSGRDASDLLQGLITNDASLLTRQNPSLYTMLLNQQGRVLYDAIIYGIYKEG 113 Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SSF 115 +E +++E + L + +K+R V +I ++ W F +S Sbjct: 114 NDEAVYLVECENELAPELQKHMKMFKIRKKV--DILNVSSEYEVWAAYEVFGKVDYPTSM 171 Query: 116 IDERFSIADVLLHRTWGH------NEKIAS--------DIKTYHELRINHGIVDPNTDFL 161 ++E +AD L T+G N + D+ YH R HGI + + D Sbjct: 172 VNESICVADPRL-STFGRRLVVPKNTNLPELIPGLTEMDVHNYHTHRYIHGICEGSNDLP 230 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 P ++ +D +NG+S KGCY+GQE+ +R H +IRKR M +T T+ Sbjct: 231 VGNALPLESNLDYMNGVSFHKGCYLGQELTARTHHTGVIRKRLMPVTLTN 280 >gi|156386911|ref|XP_001634154.1| predicted protein [Nematostella vectensis] gi|156221234|gb|EDO42091.1| predicted protein [Nematostella vectensis] Length = 330 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 46/273 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA--------ILTPQGKILLYFLI 57 L + ++V G ++ FLQ ++T ++ ++ G + L QG++L ++ Sbjct: 36 LDKRCILRVSGPDSVKFLQGLVTNNI-----ELFHGDSTIRSMYTMFLNAQGRVLYDAIL 90 Query: 58 SK----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 SK E +F +E DRS +L L F+KLRS +I G+V W T + Sbjct: 91 SKDKTHSETPSFFIECDRSISAALTKHLKFFKLRSKA--DISHAEGLV-PW----TVFSE 143 Query: 114 SFID-------ERFSIADVLLHRTWGHNEKIASDIK--------------TYHELRINHG 152 +D + FSI + GH + SD Y E R G Sbjct: 144 EIVDLKPEEDWKDFSIVPDPRVKKLGHRLILPSDTDPSACIEGAGHAPRGAYEEHRARLG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + + P + +D LNG+S KGCYIGQE+ +R H +IRKR M T + Sbjct: 204 VCEGEEEIPIANAMPLEYNLDFLNGVSFHKGCYIGQELTARTHHTGVIRKRIMPFTIASN 263 Query: 213 LPPSGSPILTDDIEI-GTLGVVVGKKALAIARI 244 SG+ I T+ + G + +V G+ L + R+ Sbjct: 264 NISSGAAIKTEAGKASGKVCIVHGQYGLGMIRL 296 >gi|302916931|ref|XP_003052276.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI 77-13-4] gi|256733215|gb|EEU46563.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI 77-13-4] Length = 389 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLI----- 57 L+++ I + G A FLQ I+TA+V P K +A LT G++L + Sbjct: 47 LTSRRLISIAGPDAAKFLQGIVTANVSAADGEPRKDGFYTAFLTATGRVLYDVFVYPNHG 106 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSF 115 + EE F++E+D + L + YKLR+ + + + + V +W+ + S Sbjct: 107 ASAEEPGFLIEVDADQAKMLAKHIKRYKLRAKLAVRLLGEDEASVWHAWDDSKGTNWDSI 166 Query: 116 IDE-RFSIAD----------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 +++ + ++ D V L + + S Y R HG+ + + Sbjct: 167 VNQTKLTLQDPRAPGLGCRFVRLDQNTPEIDLERSTEDAYTIRRYLHGVPEGQDEISREH 226 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216 P + MD++NGI KGCY+GQE+ R +HR ++RKR P +I + P+ Sbjct: 227 ALPQETNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCVIYEKEHAAPT 280 >gi|260797653|ref|XP_002593816.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae] gi|229279046|gb|EEN49827.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae] Length = 441 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 27/292 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE 61 V L +S ++V G IPFLQ ++T DV +L + A + IL QG++L L+ ++ Sbjct: 148 CVRLEERSLVRVAGSDTIPFLQGLVTNDVTSLNTENRALYTMILNVQGRVLYDVLMYNLQ 207 Query: 62 ED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + +LE D + SLI L YK+R V +I + W S+ Sbjct: 208 SSPTSPPSLLLECDHTVVPSLIKLLKMYKIRKKV--DICSVADEYTVWALLPGTSDPPVF 265 Query: 117 --DERFSIAD----------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 D S+ D VL T + + YH R G+ + D Sbjct: 266 VSDTGLSVTDPRLPDLGNRVVLKSGTNLVFDCVEGTSTDYHTHRYQLGVGEGVNDLPTGN 325 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILT 222 P ++ + +LNG+S KGCY+GQE+ +R H +IRKR P+I+ L + Sbjct: 326 CTPLESNLAILNGVSFDKGCYVGQELTARTHHTGVIRKRLMPIILDRPASLEAGSTLTNE 385 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272 +G G +A+ R+ H+ +K G V +KA P W+ Sbjct: 386 KGKNVGKFRHAQGVHGIALVRL---AHSQEKLYCKQESGEEVGLKAETPKWW 434 >gi|56696136|ref|YP_166492.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] gi|56677873|gb|AAV94539.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] Length = 244 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 20/255 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + ++ +++ G FLQ +++ D+ L + +A+LTPQGK L F + + +++ Sbjct: 1 MPSRRILRLSGADTDSFLQGLVSNDIRKLDQGLVY-AALLTPQGKYLADFFLCR-DDEGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L+I S D+ + +L YKLR+ V I +N + D R Sbjct: 59 LLDIAESLADATLKRLSMYKLRAAVEIGDSGLN----LQRGTGPAPAGALPDPR------ 108 Query: 126 LLHRTWGHNEKI----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 H T G + D + +R+ H I + + P + + LNG+ Sbjct: 109 --HPTLGWRAYTPAPESDDGSDWDAIRVAHCIPETGIELTPDSYLLESGF-EALNGLDFR 165 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGCY+GQEV +R++H+ +RK + + G+ I D +G L G A+A Sbjct: 166 KGCYVGQEVTARMKHKTELRK-GLARVAIEGAAEPGTEITADGKPVGVLHTRAGDHAIAY 224 Query: 242 ARIDKVDHAIKKGMA 256 R D+ + G A Sbjct: 225 LRFDRAGGEMSAGEA 239 >gi|310816646|ref|YP_003964610.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare Y25] gi|308755381|gb|ADO43310.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare Y25] Length = 246 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 21/247 (8%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGS----AILTPQGKILLYFLISKIEEDTFILEI 69 + G +PFLQ ++T DV K A G+ A+LTPQGK + F + + + +L++ Sbjct: 10 ITGTDRLPFLQNLVTNDV-----KRAEGALVYTALLTPQGKFIADFFLHE-DGSRLLLDV 63 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 D +LI +L Y+LR++V +I + VV + + D R L R Sbjct: 64 DAGAAAALIPRLSMYRLRADV--QIAETDLVVSRGTGDA--PAGALADPRDP---RLGWR 116 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 +G + SD + LR++ + + + + + + L+G+ KGCY+GQE Sbjct: 117 LYGAAD--VSDATDWDALRVDLLVPEMGAELTGESYILENGF-ERLHGVDFRKGCYVGQE 173 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249 V +R++H+ +RK + D P G+ I+ D E G L G +A+A R D+ Sbjct: 174 VTARMKHKTELRKGLARVQVVGDAAP-GTVIMAGDREAGQLLTRAGDQAIAYLRFDRAGG 232 Query: 250 AIKKGMA 256 + G A Sbjct: 233 EMTAGSA 239 >gi|89055962|ref|YP_511413.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia sp. CCS1] gi|88865511|gb|ABD56388.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia sp. CCS1] Length = 247 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 19/243 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64 +++ +++ G A FLQ ++T D L Y SA+LTPQGK L +FL+ + D Sbjct: 7 EDRTILRLSGADAHGFLQGLVTRDAGEGLTY-----SALLTPQGKYLADFFLLDR--GDD 59 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L++ ++ +L Y+LR++V IE + V +F D R Sbjct: 60 ILLDVKSDIARAVAQRLGMYRLRADVTIEEADLP-VARGLGD---MPAGAFADPRDP--- 112 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R +G + + LR+ + + + P+ + +A D L G+ KGC Sbjct: 113 SLGWRAYGVAG--GDPVTDWTALRVAACVPETGVELTPNDTYILEAGFDRLCGVDHKKGC 170 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y+GQEV +R++H+ + K+ + D P G+ I+ + GTL G + +A R Sbjct: 171 YLGQEVTARMKHKTEL-KKGFVTVSVDGTAPVGTAIMAGEKPAGTLYTQAGGQGIAYLRF 229 Query: 245 DKV 247 D+ Sbjct: 230 DRA 232 >gi|171686930|ref|XP_001908406.1| hypothetical protein [Podospora anserina S mat+] gi|170943426|emb|CAP69079.1| unnamed protein product [Podospora anserina S mat+] Length = 425 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 18/214 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYF--LISK 59 L ++S I + G A FL+ IIT ++ T P + +A L+ QG+IL +Y ++ Sbjct: 89 LPSRSLISLSGPDAAKFLRGIITNELPTTPSTLTY-AAFLSAQGRILNDVFIYLDPRLTS 147 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSS--- 114 D+F++E+ + +L+ L YKLRS I + P V+ W + Sbjct: 148 SPPDSFLIEVSTLEAATLVKHLKRYKLRSKCAIALLPQEEASVIAVWGSPDSIPAQGESL 207 Query: 115 --FIDER---FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 D R + VL + ++ S+ + Y LR +G+ + + + PH+ Sbjct: 208 RYCPDPRVPSWQRGLVLGGGSGLEGVQMQSE-EVYTLLRYANGVAEGQEEIVRDGGLPHE 266 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +DLL G+ KGCY+GQE+ R +HR ++RKR Sbjct: 267 SNLDLLGGVDFRKGCYVGQELTIRTEHRGVVRKR 300 >gi|307294356|ref|ZP_07574200.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1] gi|306880507|gb|EFN11724.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1] Length = 245 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 10/203 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++ Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKPGEPRWTALLTPQGKALFDFILWAD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +D I + + ++ D+L +L Y+LR V I + + + W E + +D R Sbjct: 61 GDDVLI-DCEAAQADALAKRLTIYRLRRKVAIARE--ESLAVHWALE---AADKPLDPRL 114 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L HR W + R+ G+ + + I + L G+ Sbjct: 115 P---ALGHR-WIAPADGGDAAAAFRAHRLALGVFEGAGELGQDQILWLETNAGELGGVDY 170 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203 KGCY+GQE +R+ +RN + +R Sbjct: 171 DKGCYVGQENTARMHYRNKVSRR 193 >gi|326472590|gb|EGD96599.1| aminomethyl transferase [Trichophyton tonsurans CBS 112818] Length = 408 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 42/260 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57 L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I Sbjct: 49 LNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104 Query: 58 SKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------QPINGVV 101 E E +++E+D+ + L+ +KLRS + +G Sbjct: 105 YPFETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNT 164 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-----------KTYHELRIN 150 W++ F S+ I S A + +R +K+ S I + Y R+ Sbjct: 165 SGWHENDVFKESNAIICPDSRAPGMGYRVIASGDKLPSRITEAFPGDETSFEAYTLRRML 224 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208 G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ + Sbjct: 225 QGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLY 284 Query: 209 GTDDLPPSGS-PILTDDIEI 227 + PP+ P+ D I Sbjct: 285 ESTQAPPTSDIPVYDPDTSI 304 >gi|327298835|ref|XP_003234111.1| aminomethyl transferase [Trichophyton rubrum CBS 118892] gi|326464289|gb|EGD89742.1| aminomethyl transferase [Trichophyton rubrum CBS 118892] Length = 409 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56 +L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103 Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99 I E E +++E+D+ + L+ +KLRS + + I +G Sbjct: 104 IYPFETASSPAGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148 +W++ F ++ I A + +R K+ S I+ Y R Sbjct: 164 NTSAWHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRR 223 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 224 MLRGVGEGQVEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283 Query: 209 ---GTDDLPPSGSPILTDDIEI 227 T LP S P+ D I Sbjct: 284 LYKSTKTLPTSDMPVYDPDTSI 305 >gi|302497401|ref|XP_003010701.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371] gi|291174244|gb|EFE30061.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371] Length = 409 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56 +L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103 Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99 I E E +++E+D+ + L+ +KLRS + + I +G Sbjct: 104 IYPFETASSPTGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148 +W++ F ++ I A + +R K+ S I+ Y R Sbjct: 164 NTSAWHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRR 223 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 224 MLQGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283 Query: 209 ---GTDDLPPSGSPILTDDIEI 227 T LP S P+ D I Sbjct: 284 LYESTKTLPTSDMPVYDPDTSI 305 >gi|315041995|ref|XP_003170374.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893] gi|311345408|gb|EFR04611.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893] Length = 407 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57 L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I Sbjct: 49 LNNRSLISLSGVDSTGFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104 Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLS------ 103 S E +++E+D+ SL+ +KLRS + + V S Sbjct: 105 YPFQTANSAAGEMEYLIEVDKETSGSLLKHFKRHKLRSKLKFRALDEGERSVWSLWDDGN 164 Query: 104 -WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINH 151 W++ F ++ I A + +R +K+ S I+ Y RI Sbjct: 165 TWHENEAFKENNIIACPDGRAPGMGYRVIASGDKLPSRFIEAFPGDETSIQAYTLRRILQ 224 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--- 208 G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 225 GVGEGQAEMARESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYD 284 Query: 209 GTDDLPPSGSPILTDDIEI 227 T + P S +P+ D I Sbjct: 285 STLEPPTSDTPVYNPDTNI 303 >gi|270006859|gb|EFA03307.1| hypothetical protein TcasGA2_TC013249 [Tribolium castaneum] Length = 336 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 50/307 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISK-IEED 63 L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E + Sbjct: 28 LNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSENN 87 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQ------- 106 T+++E D D L L Y++R + I + L+ NQ Sbjct: 88 TYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPPL 147 Query: 107 EHTFSNSS----FIDERFS--------IADVLLHRTWGHNEKIA--SDIKTYHELRINHG 152 E F + D R + +DV + G N + S K Y LR + G Sbjct: 148 ETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSLG 207 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + + Sbjct: 208 VGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSKI 267 Query: 213 LPPSGSP---ILTDDIEIGTLGVVVGKKALAIARIDKV----DHAIKKGMALTVHGVRVK 265 P+ P I+ +++ +G L + G LA RI K + + G+A+T Sbjct: 268 --PTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLGDGVAVT------- 318 Query: 266 ASFPHWY 272 S P W+ Sbjct: 319 -SRPSWW 324 >gi|103486912|ref|YP_616473.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis alaskensis RB2256] gi|98976989|gb|ABF53140.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis alaskensis RB2256] Length = 241 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISK 59 M+ L +++ I++ G+ FLQ ++T DV LP +A+LTPQGK L FLI Sbjct: 1 MAITTLRDRALIRLSGEDVRGFLQGLVTNDVSGNLPVW----AALLTPQGKALFDFLIWG 56 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + D +++ +R + L +L Y+LR + I +P + + W E +D R Sbjct: 57 -DGDDLLIDCERDAAEGLAKRLTLYRLRRAITIAREP--DLCVHWAPEGDLG---VVDPR 110 Query: 120 FSIADVLLHRTW---GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 L R W ++ A H L + G+ + ++ T + LN Sbjct: 111 LPE----LGRRWLAPADGDEGADAAWRAHRLAL--GVTEGRSELGDGTTLWLECNAAELN 164 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 G+S KGCY+GQE +R+ R + +R +++ Sbjct: 165 GVSFAKGCYVGQENTARMNWRQKVNRRIVVL 195 >gi|302652124|ref|XP_003017922.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517] gi|291181507|gb|EFE37277.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517] Length = 409 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56 +L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103 Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99 I E E +++E+D+ + L+ +KLRS + + I +G Sbjct: 104 IYPFETASSPAGEMEYLIELDKETSEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148 +W++ F ++ I A + +R K+ S I+ Y R Sbjct: 164 NTSAWHESEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDETSIEAYTLRR 223 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 224 MLRGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283 Query: 209 ---GTDDLPPSGSPILTDDIEI 227 T LP S PI D I Sbjct: 284 LYESTKTLPTSDMPIYDPDTSI 305 >gi|312380505|gb|EFR26480.1| hypothetical protein AND_07439 [Anopheles darlingi] Length = 374 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 49/312 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE--- 62 LS+++ ++V G+ ++ FLQ ++T D+ + A + L G++ L+ + E Sbjct: 59 LSDRALVRVHGEDSVSFLQGLMTNDMRHFEHSRAIYTMFLRVNGRVFCDALVYRHPEAKG 118 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERF 120 D F+LE DR L L Y+LR V + + +++ Q + + +DER Sbjct: 119 NDDFLLECDRPAASRLEKHLKLYRLRKKVQVLLDETYHTWVAYRAQADPEAKALPVDERK 178 Query: 121 SIAD---------------VLLHRTWGHNEKIASDIKT----------YHELRINHGIVD 155 + D VL+ EK+ ++T Y R G+ + Sbjct: 179 AHTDPHLFKDPRLPRLGYRVLMGSNGDQTEKLDRLLETFPGEIATVPRYVPFRYTLGVGE 238 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + FP ++ D L+G+S KGCYIGQE+ +R H + RKR M + + LP Sbjct: 239 GELNLPDGKAFPLESNCDWLHGVSFHKGCYIGQELTARTYHTGVTRKRLMPLQ-FEGLPL 297 Query: 216 SGSPI--LTDDIEIGTLGVVVGK-------KALAIARIDKVDHAIKKGMALTV------H 260 PI L + +G VGK + L + RI+KV + G LT+ H Sbjct: 298 EDVPIDVLREADIKNQVGASVGKLRGYSAGQGLGLLRIEKV---LPAGGPLTLSVPGITH 354 Query: 261 GVRVKASFPHWY 272 + P W+ Sbjct: 355 SIVCHTIRPFWW 366 >gi|308498249|ref|XP_003111311.1| hypothetical protein CRE_03852 [Caenorhabditis remanei] gi|308240859|gb|EFO84811.1| hypothetical protein CRE_03852 [Caenorhabditis remanei] Length = 280 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 29/281 (10%) Query: 1 MSS---VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 MSS + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ Sbjct: 1 MSSQRLIKLPHRVLLKLHGADTNVFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLL 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + + LE + +D L+ +++ Y+LR V EI + V + +++ D Sbjct: 61 WRRGTEDVFLECSKVNQDVLVKEIVKYRLRKRV--EISETSDQV--FFEQNPSDKHEHRD 116 Query: 118 ERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 RF+ R +G+ + +I+ + + Y LR + GI + + + + P A DLL Sbjct: 117 PRFA---GFGARIFGNPPSSEISENREAYENLRRSTGIAEGADEL--ADLLPFQANGDLL 171 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 N +SL KGCYIGQE+ +R H +IR+R P G + G+ IL D + +G V Sbjct: 172 NMVSLDKGCYIGQELTARTAHTGVIRRRILPFECEGQVKI---GADIL--DEKKNKVGKV 226 Query: 234 VGK---KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + + L I ++ K LT V + A P W Sbjct: 227 ISSDTTRCLGILQLSSF-----KSSKLTADEVSLTAKQPEW 262 >gi|85084479|ref|XP_957315.1| hypothetical protein NCU06424 [Neurospora crassa OR74A] gi|74628446|sp|Q7RYZ1|CAF17_NEUCR RecName: Full=Putative transferase caf-17, mitochondrial; Flags: Precursor gi|28918405|gb|EAA28079.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 439 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 47/298 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLI------ 57 L+++ I V G A FLQ +IT ++ P+ A G + LT QG+++ +I Sbjct: 59 LTSRRLISVSGPDASKFLQGVITNNI-NAPHN-ANGFYTGFLTAQGRVVHDVIIYPDDLG 116 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ-EHTFSNSS 114 + + +F++E+D + +L + YKLRS +++ L SWN + + Sbjct: 117 PEPGKQSFLIEVDADEAATLHKHIKRYKLRSKFNLKLLDPEERALYHSWNDVDQAGPWTK 176 Query: 115 FIDERFSIAD---------------VLLHRTWGHNEKIASDI---KTYHELRINHGIVDP 156 IDE + + V++++T + D+ +YH R GI + Sbjct: 177 LIDEVQNAGNARAVPDPRVPAFGSRVVVNQTSSSSPLTDGDLTPESSYHLRRFLLGIPEG 236 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214 ++ + T P ++ MD++NGI KGCY+GQE+ R +HR ++RKR P I+ P Sbjct: 237 QSEIISGTALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYYEGAAP 296 Query: 215 --PSGSP--------ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 P+ P +L ++E G ++ + A IDKVD + + G+ Sbjct: 297 EIPADGPGQLEALEKLLKPEVEQGVKAEMIPQG----ASIDKVDKKSRSAPGKWLRGI 350 >gi|325183767|emb|CCA18225.1| hypothetical protein TTHERM_00155360 [Albugo laibachii Nc14] Length = 366 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 33/232 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S V LS++ ++V GK A FLQ I+T D+ L + + ++ LT +G+IL + ++ Sbjct: 14 SVVKLSSRKLVQVEGKDASRFLQGILTNDINKLKQRSSMYASFLTAKGRILGDCNVIRVN 73 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSN 112 E+TF ++ D S ++ L + YKLR V IE + +L+ Q+ + Sbjct: 74 EETFWIDYDASSKEGLQNHWKRYKLRMKVSIEDRSDQFNILALLPALYRYPGLQKTSLDG 133 Query: 113 SSFIDERFSIADVLLHRTW---------------GHNEKI------ASDIKTYHELRINH 151 S I ++ A H + G++E I ++D + + RI Sbjct: 134 ESAIFDKLETAYGSRHLIFTDPRSKMFGIRAVVEGNDESIVHDAFESADASIFDDRRIFL 193 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G + + + P +A +D L+G+S +KGCY+GQE+++R + ++RKR Sbjct: 194 GAAEGSE---LHDLIPLEANLDALDGVSFSKGCYVGQELMARTHFKGLVRKR 242 >gi|289620040|emb|CBI53484.1| unnamed protein product [Sordaria macrospora] Length = 446 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 39/294 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKIE-- 61 L+++ I V G A FLQ +IT ++ P+ A G + LT QG+++ +I E Sbjct: 66 LTSRRLISVSGPDASKFLQGVITNNI-DAPHN-ANGFYTGFLTAQGRVVHDVIIYPDELG 123 Query: 62 ----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ-EHTFSNSS 114 + +F++E+D ++ +L + YKLRS +++ L +WN + + S Sbjct: 124 PEPGKRSFLIEVDANEAMTLHKHIKRYKLRSKFNLKLLDPEERALYHAWNDVDQSGPWSK 183 Query: 115 FIDE------RFSIAD---------VLLHRTWGHNEKIASDI---KTYHELRINHGIVDP 156 IDE ++ D V++++T + +D+ +YH R GI + Sbjct: 184 LIDEIQKDGNPRTVPDPRVPAFGSRVIVNQTSSSSSLTDNDLTPESSYHLRRFLLGIPEG 243 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214 ++ + + P ++ MD++NGI KGCY+GQE+ R +HR ++RKR P I+ P Sbjct: 244 QSEIISGSALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYSEGAAP 303 Query: 215 --PSGSPILTDDIE-IGTLGVVVGKKALAI---ARIDKVDHAIKKGMALTVHGV 262 P+ P + +E + V G KA I A IDKVD + + G+ Sbjct: 304 EIPADGPGQLEALEKLLKPEVDEGVKAEMIPQGASIDKVDKKSRSAPGKWLRGI 357 >gi|218507752|ref|ZP_03505630.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli Brasil 5] Length = 119 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTP GKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIASLAADEARPGALLTPHGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107 + D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGINVCWGED 114 >gi|301619957|ref|XP_002939357.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 319 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 31/291 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---ILTPQGK----ILLYFLISKI 60 + +++ G FLQ +IT DV ++A G+ +L QG+ ++LY L ++ Sbjct: 28 RRGLLQLRGPDPAMFLQGLITNDV----QRLAEGALYAHLLNVQGRSLFDVILYRLPTEH 83 Query: 61 EEDTFIL-EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFS----NS 113 E + IL E D + + L Y R VII P V V+S +Q+ S Sbjct: 84 SETSAILLECDVAAVGPIQKHLSLYNFRRKVIICPCPELSVWAVISGSQKQDTQMPDLPS 143 Query: 114 SFI---DERFSIADVLLHRTWGHNEK---IASDIKTYHEL---RINHGIVDPNTDFLPST 164 S I D R L G N K ++ +Y+E R G+ + D P Sbjct: 144 SVICAADPRVEAMGFRLVAQSGENPKKLLPETETGSYNEYTKHRYEQGVPEGVQDIPPGV 203 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--PSGSPILT 222 P ++ + +NGIS +KGCY+GQE+ +R H IIRKR + I + LP G+ ILT Sbjct: 204 ALPLESNLVYMNGISFSKGCYLGQELTARTHHTGIIRKRLLPIRFSTPLPAEAEGADILT 263 Query: 223 DDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + G G LA+ R+ + + + + V VKAS P W+ Sbjct: 264 SAGKPAGKYRAGHGDIGLALLRMAHIGEELHIKPS-SGSSVSVKASIPEWW 313 >gi|189237667|ref|XP_001812410.1| PREDICTED: similar to GA20785-PA [Tribolium castaneum] Length = 968 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 50/307 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISK-IEED 63 L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E + Sbjct: 660 LNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSENN 719 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQ------- 106 T+++E D D L L Y++R + I + L+ NQ Sbjct: 720 TYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPPL 779 Query: 107 EHTFSNSS----FIDERFS--------IADVLLHRTWGHNEKIA--SDIKTYHELRINHG 152 E F + D R + +DV + G N + S K Y LR + G Sbjct: 780 ETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSLG 839 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + + Sbjct: 840 VGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK- 898 Query: 213 LPPSGSP---ILTDDIEIGTLGVVVGKKALAIARIDKV----DHAIKKGMALTVHGVRVK 265 P+ P I+ +++ +G L + G LA RI K + + G+A+T Sbjct: 899 -IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLGDGVAVT------- 950 Query: 266 ASFPHWY 272 S P W+ Sbjct: 951 -SRPSWW 956 >gi|116191917|ref|XP_001221771.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51] gi|121786583|sp|Q2H6N9|CAF17_CHAGB RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|88181589|gb|EAQ89057.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51] Length = 437 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 39/236 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------------SAILTPQGKILL 53 LS++ I V G A +LQ +ITA+ LT Y +A LT QG+IL Sbjct: 69 LSSRKLISVSGPDAAKYLQGVITAN-LTPGYAGPNPTSEHLRSDAGFYAAFLTAQGRILH 127 Query: 54 YFLISKIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSW 104 I + DT +++E+D ++ D L + YKLR+ + + + V +W Sbjct: 128 DVFIYRDVRDTTHPAGHSWLVEVDAAEADRLQKHIKRYKLRAKFDVRLLNEGEGRVWHAW 187 Query: 105 NQEH----TFSNSSFIDERFSIADVLLHRT--WGHNEKIASDI-----------KTYHEL 147 + + T + SF +I HR GH S Y Sbjct: 188 DDANPSSLTTTQPSFPSSSPTIITTPDHRAPNLGHRLLTFSTPTPSLPLPTLPETAYRLR 247 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R HGI + + L +T PH++ +D + KGCY+GQE+ R +HR ++RKR Sbjct: 248 RYRHGIAEGQAELLYNTALPHESNLDATGAVDFRKGCYVGQELTIRTEHRGVVRKR 303 >gi|94496221|ref|ZP_01302799.1| aminomethyl transferase [Sphingomonas sp. SKA58] gi|94424400|gb|EAT09423.1| aminomethyl transferase [Sphingomonas sp. SKA58] Length = 273 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DVLTL R + +LTPQGK L ++ + Sbjct: 25 MTGTTLTDRALLRISGEEARAFLQGLLTRDVLTLQPGHPRWTGLLTPQGKALFDVILWED 84 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSF 115 D I + + S+ D L +L Y+LR V I + + + W +Q H + Sbjct: 85 GGDVLI-DCEASQADMLAKRLTLYRLRRKVTIARE--EALAVHWSPDAADQPHDPRLPAL 141 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + AD +T G + A+ + R++ G+ + + + + L Sbjct: 142 GHRWLASAD---DQT-GEGDAAAA----FRTHRLSLGVFEGVEELGQDQVLWLETNAQEL 193 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ KGCY+GQE +R+ +RN + +R Sbjct: 194 GGVDYDKGCYVGQENTARMHYRNKVSRR 221 >gi|332374088|gb|AEE62185.1| unknown [Dendroctonus ponderosae] Length = 343 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 44/307 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIE-E 62 +L +S ++V G A FLQ +IT D+ L ++ A+ L +G+IL LI K E + Sbjct: 27 HLKERSLVQVKGPDASNFLQGLITNDINHLSDRVGSMFAMFLNIRGRILFDTLIYKTEVK 86 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPING------------VVLSW 104 D + +E DR +L L YK++ V I E+ + V+ Sbjct: 87 DEYWVECDRIASTTLQKHLKMYKVKRQVDITGLDDYEVHVLYSSKFLDTSVTDFKSVIEN 146 Query: 105 NQEHTFSNSS-----------FIDER-----FSIADVLLHRTWGHNEKIASD-IKTYHEL 147 + F SS F D R F I + N + D +Y +L Sbjct: 147 AGKSDFPESSAGFRSFNSLLIFKDPRVPHMGFRILSKRIDVQSVLNSLVECDDSNSYRKL 206 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM 205 + + GI + D L + FP + D L+G+S KGCYIGQE+ +R H +IRKR P+ Sbjct: 207 KFSLGIGEGIEDLLSGSSFPLECNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPL 266 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + P G+ I+ + +G L + G LA+ R V A++ G ++TV Sbjct: 267 HFSKVPTALPEGN-IVINKSNLGKLRGIEGNVGLALLR---VAEALELG-SITVGNGEAS 321 Query: 266 ASFPHWY 272 P W+ Sbjct: 322 IVKPFWW 328 >gi|316967725|gb|EFV52115.1| aminomethyl transferase family protein [Trichinella spiralis] Length = 488 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64 L+N+ +KV G + LQ +++ DVL L + S +L QG+I+ L+ + E+ + Sbjct: 33 LNNRKILKVTGPDRMALLQLVLSNDVLLLHEHRSLYSLMLNKQGRIMYDVLLFEDEDGKS 92 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSI 122 ++E D +I +L Y++R V + V + + NQ H S + + I Sbjct: 93 TLVECDADVHADVIAFILKYRMRKTVDVVADNSRSVYVYYLPNQAHIREPSIRLPDGTLI 152 Query: 123 A-----DVLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 A + L R + I++ +K Y + R + + + + DF+P T FPH+ Sbjct: 153 AKDPRSEYLGFRIITESSLISTISAGCVTLKEYIDYRYSLALGEGSKDFIPGTCFPHETN 212 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G++ +KGCYIGQE+ +RI++ ++RKR M Sbjct: 213 ARQFKGMNFSKGCYIGQELTARIEYTGVVRKRFM 246 >gi|328785953|ref|XP_001120590.2| PREDICTED: putative transferase C1orf69, mitochondrial-like [Apis mellifera] Length = 371 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 58/318 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIEEDT 64 L N+S ++V G + FLQ +IT D+ A A+ L +G+++ +I + +ED Sbjct: 46 LKNKSLLRVRGNEVLIFLQGLITNDMKHFEEGAANLYALFLNTKGRVMYDVIIYRSQEDN 105 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQE-- 107 + +E D +SL L Y++R + I+ IQ +N ++ Q+ Sbjct: 106 VYYIECDSQAAESLQKHLKMYRVRRKIDIDYLEDSVNVWAFFDPIQHMNNKHINNRQKLE 165 Query: 108 ------HTFSNSS---------FIDERFS--------IADVLLHRTWGHNEKIASDIK-- 142 T +N + D R S +++ H+ H A D Sbjct: 166 GLIFPCGTLNNKVSKIVDNIMIYEDPRLSDLGIRILAASEIERHKIIKHLNSNALDSANH 225 Query: 143 -TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 +Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H ++R Sbjct: 226 LSYKAFRYKLGVPEGIEDLPPGKPLPLEVNCDYLHGVSFHKGCYIGQELTARTYHTGVVR 285 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-------KALAIARIDKVDHAIKKG 254 KR M + +++P D+ I G VVGK L + RI+ +A Sbjct: 286 KRLMPLL-FNEVP--NKSFSYDEKIINETGNVVGKFRGIENQYGLGLMRINDSLNA---- 338 Query: 255 MALTVHGVRVKASFPHWY 272 +LT+ +++K S P W+ Sbjct: 339 QSLTISNIKLKVSKPIWW 356 >gi|313236585|emb|CBY19877.1| unnamed protein product [Oikopleura dioica] Length = 308 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 30/260 (11%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 +S I + G+ A LQ +IT D+ L + + S L +G++ ++ + ED ++E Sbjct: 26 RSLISIRGEDAKALLQGVITNDISNLQHVGSMYSMFLNAKGRVYFDAILYHLNEDEILIE 85 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------QEHTFSNSSFIDERFS 121 D+ L L YK+R V I IN V W+ + +FID R Sbjct: 86 GDKILSAKLKKHLSMYKIRRKV--NIHAINESV--WHVVPGDDILDLGTLGDTFIDPRL- 140 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + + R + ++ YH R GI + + + FP + DL++G+S Sbjct: 141 --EKMGARVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGVSFH 198 Query: 182 KGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP-----SGSPILTDDIEIGTLGVVV 234 KGCY+GQE+ +R H + RKR P+ ++ +D+ S I+T D E Sbjct: 199 KGCYLGQELTARTFHTGVTRKRIVPLKLSPGNDVSDIKAKRSAGKIITVDSE-------- 250 Query: 235 GKKALAIARIDKVDHAIKKG 254 LA+ R D D +K G Sbjct: 251 -GNGLAMFRTDNFDKTVKVG 269 >gi|317150522|ref|XP_001824084.2| transferase caf17 [Aspergillus oryzae RIB40] Length = 448 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55 L+N+ I + G + FLQ +IT ++L + +A L QG++L LY Sbjct: 49 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 108 Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109 L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 109 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 168 Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143 +++ E S IA + R G +I A D++T Sbjct: 169 PRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAGSEV 228 Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H + Sbjct: 229 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 288 Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227 +RKR + + TG D L +G+P+ E+ Sbjct: 289 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 320 >gi|121799784|sp|Q2U664|CAF17_ASPOR RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|83772823|dbj|BAE62951.1| unnamed protein product [Aspergillus oryzae] Length = 447 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55 L+N+ I + G + FLQ +IT ++L + +A L QG++L LY Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 107 Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109 L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 108 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 167 Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143 +++ E S IA + R G +I A D++T Sbjct: 168 PRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAGSEV 227 Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H + Sbjct: 228 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 287 Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227 +RKR + + TG D L +G+P+ E+ Sbjct: 288 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 319 >gi|259416996|ref|ZP_05740916.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B] gi|259348435|gb|EEW60212.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B] Length = 248 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 14/253 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ ++ G FLQ ++T D+ L + +AILTPQGK L F ++ E + Sbjct: 1 MADRRIFRLHGPDTHSFLQGLVTNDINRLEDGLVY-TAILTPQGKYLADFFLAP-EGEAV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ D L+ +L YKLR+NV I+ + V E + D R + Sbjct: 59 LLDVADDLADDLLKRLKMYKLRANVTIDETDLK--VRRGTGEA--PAGALTDPRHT---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G + D + +R+ H I + + P + + + + LNG+ KGCY Sbjct: 112 LGWRFYG--DVAGEDGSDWDAIRVAHVIPETGIELTPDS-YILEVGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + D P G+ I +G + G KA+A R D Sbjct: 169 VGQEVTARMKHKTELRK-GLTQVEIDGAVPVGAQITAAGKPVGQVLTQSGGKAIAYLRFD 227 Query: 246 KVDHAIK-KGMAL 257 + A++ +G AL Sbjct: 228 RAKGALEAEGTAL 240 >gi|46205197|ref|ZP_00209741.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 115 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 D F LE + L+ +L Y+LR+ V + P GV +W+ T + ++ + Sbjct: 60 AGDGFRLETAAERVADLVKRLGLYRLRAKVSLAADPTLGVAAAWDGAETAAETARV 115 >gi|238499867|ref|XP_002381168.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357] gi|220692921|gb|EED49267.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357] Length = 448 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55 L+N+ I + G + FLQ +IT ++L + +A L QG++L LY Sbjct: 49 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 108 Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109 L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 109 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 168 Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143 +++ E S IA + R G ++ A D++T Sbjct: 169 PRWAAYNLESSSSSPFSPSSSIAGCIDTRAPGFGSRLITPGAEDLRTHVPDETQIAGSEV 228 Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H + Sbjct: 229 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 288 Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227 +RKR + + TG D L +G+P+ E+ Sbjct: 289 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 320 >gi|320461691|ref|NP_001070103.2| putative transferase C1orf69 homolog, mitochondrial [Danio rerio] gi|263405678|sp|B8JMH0|CAF17_DANRE RecName: Full=Putative transferase CAF17 homolog, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|220673097|emb|CAX13033.1| novel protein (zgc:153540) [Danio rerio] Length = 354 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 35/302 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGK----ILLYF 55 S L +++ + V G+ FLQ IIT D+ L A + +L QG+ I+LY Sbjct: 50 SCYRLPHRTVLNVSGQDTSSFLQGIITNDMNLLGEDSLNAMYAHVLNVQGRTLYDIILYS 109 Query: 56 LISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEH---- 108 L + + +LE D + +DS++ L YK+R V + + P + +L ++E Sbjct: 110 LKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSLSLWALLPHSKEAVLGR 169 Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDP 156 T ++ + E+ +++ R + DI + YH R G+ + Sbjct: 170 PDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGNTEEYHRHRYEIGLPEG 229 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214 D P P +A + + GIS +KGCYIGQE+ +R H +IRKR P+ ++ + Sbjct: 230 VGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKRLMPVSLSAPAEKL 289 Query: 215 PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPH 270 GS + T+ + G V K L++ R+ HA K+ + L G V V AS P Sbjct: 290 NQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQLKSSGDETVTVLASVPD 345 Query: 271 WY 272 W+ Sbjct: 346 WW 347 >gi|326921387|ref|XP_003206941.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Meleagris gallopavo] Length = 248 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 31/238 (13%) Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----VLSWNQEHTFSNS-SF 115 EE +LE D S D++ L YK+R V I P + V+ Q S S + Sbjct: 10 EEPHILLECDSSVLDAVQKHLKLYKIRRKV--SISPCLDLSLWAVIPGEQAGDISGSLAQ 67 Query: 116 IDERFSI------ADVLLHR---TWGHN--EKIAS----DIKTYHELRINHGIVDPNTDF 160 ER + A+V+ R G N E I +I+ YH R GI + D Sbjct: 68 YAERALVLTPDPRAEVMGWRLIVKAGANLPEVIPGSRIENIQDYHRHRYKQGIPEGVKDL 127 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PS 216 P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P Sbjct: 128 PPGVPLPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPE 187 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK--ASFPHWY 272 G+ ILT+ + G L IA + + I + + L V G +VK AS P W+ Sbjct: 188 GAEILTETGKAAG-KFRAGGDELGIALLRLAN--INEPLCLNVAGNKVKLTASIPEWW 242 >gi|326483599|gb|EGE07609.1| hypothetical protein TEQG_06523 [Trichophyton equinum CBS 127.97] Length = 395 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 33/249 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57 L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I Sbjct: 49 LNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104 Query: 58 SKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------QPINGVV 101 E E +++E+D+ + L+ +KLRS + +G Sbjct: 105 YPFETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNT 164 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 W++ F S+ I S A + +R K S Y R+ G+ + + Sbjct: 165 SDWHENDVFKESNAIICPDSRAPGMGYRKPFLAMKPRSRPIRY--ARMLQGVGEGQIEMP 222 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGS- 218 + P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ + + PP+ Sbjct: 223 RESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYESTQAPPTSDI 282 Query: 219 PILTDDIEI 227 P+ D I Sbjct: 283 PVYDPDTSI 291 >gi|322826129|gb|EFZ30885.1| hypothetical protein TCSYLVIO_2815 [Trypanosoma cruzi] Length = 317 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 32/300 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIEE 62 LS++S I+V G +A FLQ + T D+ L + L G+++ + S++ Sbjct: 7 LSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVHG 66 Query: 63 -DTFIL-EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTF 110 D IL ++ R D+L D LL ++R + I+ VV++ + +E T Sbjct: 67 GDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVATSSYGNGGIYEEEEKTP 126 Query: 111 SNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 SS F+D R LH++ + + Y GI + F P+ Sbjct: 127 PPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPDVFKPA 186 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--------TGTDDLP- 214 FP + D L G+S KGCY+GQE+ R + RKR + + TG + Sbjct: 187 RSFPFECNTDFLRGVSFQKGCYLGQELTHRTHVMLVTRKRTVPLRFPSFQEETGGERRSV 246 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWYK 273 G +L D ++G L V G L + R+ VD A + L + V V + P W++ Sbjct: 247 EKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIPGWWE 306 >gi|302694057|ref|XP_003036707.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8] gi|300110404|gb|EFJ01805.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8] Length = 391 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 47/243 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 ++N++ + V G A+ FL ++ ++V P+K +A L PQG++L + + T Sbjct: 19 VANRALLAVTGSQAVEFLNGLVASEVHA-PHKPFY-TAFLHPQGRVLHDAFVYTTTDPTS 76 Query: 65 ----FILEIDRSKRD---SLIDKLLFYKLRSNVII-------EIQPINGVVLS---WNQE 107 +++E D + +L D L Y LRS V + ++ G + W+ E Sbjct: 77 GAKGYVIEYDTRPGELSTALPDLLKRYILRSKVKLRDVTNEYDVWQAWGSPQAERFWDHE 136 Query: 108 H--TFSNSSFIDERFSIADVLLHRTW--------------------GHNEKIASD----- 140 F+ S ++ + + + TW G + ASD Sbjct: 137 RRWAFAKSGAVEPAWDVLNAWPWGTWDLALHDRRAPGMGTRMLVRKGDKPEAASDHDIAS 196 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 Y RI HG+ + D P+ FP ++ +D++ G++ KGCY+GQE+ R H ++ Sbjct: 197 TDAYKLHRILHGVPEGTADIPPTQAFPMESNLDIMGGLNFRKGCYVGQELTVRTYHTGVV 256 Query: 201 RKR 203 RKR Sbjct: 257 RKR 259 >gi|295670505|ref|XP_002795800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226284885|gb|EEH40451.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1460 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 66/302 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60 L +++ I V G+ + FLQ +IT ++LT +P K +A L G++L I + Sbjct: 1037 LPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIP-KTGFYAAFLNAPGRVLNDVFIYPV 1095 Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQ--- 106 + +++E+D+++ +L+ L +KLRS + + + WN+ Sbjct: 1096 PPNDSFNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDA 1155 Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146 E+ F + F+ D R G EK+ + D TY+ Sbjct: 1156 DLLTEYDFELENGKSPPFTCTDT---RAPGFGFRLLAPEKVVNEQPIMPGERVDFATYNL 1212 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--- 203 RI HGI + + + + P + MD++ I KGCY+GQE+ R HR ++RKR Sbjct: 1213 RRILHGIPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILP 1272 Query: 204 --------PMIITGTDD--------LPPSGSPILT----DDIEIGTLGVVVGKKALAIAR 243 PM T T D LPP+G+ I G VG LA+ R Sbjct: 1273 VRFYDINEPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCR 1332 Query: 244 ID 245 ++ Sbjct: 1333 LE 1334 >gi|330925183|ref|XP_003300945.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1] gi|311324671|gb|EFQ90954.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1] Length = 428 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 41/276 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV---LTLPYKIARGSAILTPQGKILLYF----- 55 +L ++ I + G A FLQ +IT +V P+ SA L QG++L Sbjct: 96 AHLPHRRLISLSGPDAAKFLQGLITNNVDPNRPKPFY----SAFLNAQGRVLWDVFVWVW 151 Query: 56 --LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 L+++ ++ T +E+D + + L L +KLRS V IE + V + W + +++ Sbjct: 152 PELLAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISEDEVCV-WAAWGSAADA 210 Query: 114 SFIDERFSIADVLLHRTWGHNEKIA-SDIKT------------YHELRINHGIVDPNTDF 160 +D ++ D+ R + +A +D+KT Y R +GI + + Sbjct: 211 P-VDANDAMVDMRDPRAPNFHRYLAYADVKTLVPGTEPLGVTEYQVERYRYGIAEGPDEI 269 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 P + +DL +GI KGCY+GQE+ R +H ++RKR + IT L P P+ Sbjct: 270 PRENALPMEYNIDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITL--QLHPLAEPV 327 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 T +E G+ I ID +K+G A Sbjct: 328 ETIRVEPGS----------EIKTIDDTHIGLKRGRA 353 >gi|53130544|emb|CAG31601.1| hypothetical protein RCJMB04_8k1 [Gallus gallus] Length = 165 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 11/141 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +++ YH R GI + D P P ++ + +NG+S TKGCYIGQE+ +R H Sbjct: 23 ENVQDYHRHRYKQGIPEGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMG 82 Query: 199 IIRKRPMIITGTDDLP----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253 +IRKR + + + LP P G+ ILT+ + G + +A+ R+ V+ Sbjct: 83 VIRKRLVPVQFSVPLPQESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEP--- 139 Query: 254 GMALTVHGVRVK--ASFPHWY 272 + L V G +VK AS P W+ Sbjct: 140 -LCLNVAGDKVKLTASIPEWW 159 >gi|328876509|gb|EGG24872.1| putative mitochondrial transferase [Dictyostelium fasciculatum] Length = 398 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 51/260 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59 V L N++ ++V GK ++ FLQ + T ++ L ++I L G++L ++S Sbjct: 14 VPLKNRTLVRVSGKDSVKFLQGLTTNNLTRLSDNQNTHASIYTGFLASTGRLLFDAIVSL 73 Query: 60 IEED----------------------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI 97 ++ ++I+++D + D + + L FYK+R V IE Sbjct: 74 EKQSTTTTSTASTTAATASDSNSATHSYIVDVDSAVADKVFEHLKFYKMRDKVTIEDATQ 133 Query: 98 NGVVLSW--NQEHTFSNSSFID----ERFSIADVLLHRTWG-----HNEKIA-------- 138 + V+S T N + E+ S+ H G N K + Sbjct: 134 HYSVMSVLDKTYKTIRNDKLFEHLEEEQCSVMMDPRHDNMGIRILVPNSKTSIAKKDLFS 193 Query: 139 ----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 D + YH R+ +GI + D+ +T+ P + DLLNG+ KGCY+GQE+ SR Sbjct: 194 TYSEEDEELYHLYRLQNGIPEGLKDYNYNTVIPLEYNFDLLNGVDFHKGCYLGQELTSRT 253 Query: 195 QHRNIIRKR--PMIITGTDD 212 + +IRKR P+ + D+ Sbjct: 254 HYTGLIRKRIFPVTMKAKDE 273 >gi|325091183|gb|EGC44493.1| aminomethyltransferase [Ajellomyces capsulatus H88] Length = 412 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 46/264 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60 L ++ I V GK + FLQ ++T ++LT +P K +A L G++L I + Sbjct: 47 LPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVP-KSGFYAAFLNAPGRVLHDVFIYPV 105 Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109 + +++E+D+++ +L+ + +KLRS + + + WN+E Sbjct: 106 PPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEEDA 165 Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146 F + F+ D R G EK+ + D TY+ Sbjct: 166 GQLTECDFQLDNGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNL 222 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204 RI HG+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR P Sbjct: 223 RRILHGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILP 282 Query: 205 MIITGTDD-LPPSGSPILTDDIEI 227 + + D+ +P + +P + + ++ Sbjct: 283 VQLYDIDETMPKTETPYYSSESKL 306 >gi|312216597|emb|CBX96547.1| hypothetical protein [Leptosphaeria maculans] Length = 401 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 45/279 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV---LTLPYKIARGSAILTPQGKILLYF---- 55 S L+++S I + G A FLQ +IT +V P+ +A L +G++L Sbjct: 78 SAPLAHRSLISLSGPDAAKFLQGLITNNVDASRQAPFY----AAFLDARGRVLWDVFIWV 133 Query: 56 ---LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 L+++ +E+D+++ +L L +KLRS V IE G+ +W Sbjct: 134 WPELVAEKGHWACYIEVDQTEAGALKKHLKRHKLRSKVTIEDAESVGIWAAWGDA----- 188 Query: 113 SSFIDERFSIADVLLHRTWG-HNEKIASD------------IKTYHELRINHGIVDPNTD 159 + + + +++D+ R G H +A D + YH R G+ + + Sbjct: 189 PAQVPKENAVSDLQDPRAPGLHRYLVAHDRTSLADRSEVLDVSEYHLQRYLLGVPEGPVE 248 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT----GTDDLPP 215 + P + +DL +GI KGCY+GQE+ R +H ++RKR + I G PP Sbjct: 249 IPRESALPMECNIDLSSGIDFKKGCYVGQELTIRTKHTGVVRKRMLPIQLEHPGASVSPP 308 Query: 216 -SGSPI--LTDDIEI------GTLGVVVGKKALAIARID 245 SG+ I L DD G VG+ LA+ R++ Sbjct: 309 VSGTDIKQLDDDGRTKRGRAAGKFIAGVGQVGLALCRLE 347 >gi|225684495|gb|EEH22779.1| glycine cleavage T-protein [Paracoccidioides brasiliensis Pb03] Length = 438 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 66/302 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60 L +++ I V G+ + FLQ +IT ++LT +P K +A L G++L I + Sbjct: 50 LPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIP-KTGFYAAFLNAPGRVLNDVFIYPV 108 Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109 + +++E+D+++ +L+ L +KLRS + + + WN+E Sbjct: 109 PPNDSYNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDA 168 Query: 110 FSNSSFIDE-------RFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146 + + E F+ D R G EK+ + D TY+ Sbjct: 169 DLLTEYDIELENGKSPPFTCTDT---RAPGFGFRLLAPEKVVNEQPIMPGERVDFATYNL 225 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--- 203 RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR ++RKR Sbjct: 226 RRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILP 285 Query: 204 --------PMIITGTDD--------LPPSGSPILT----DDIEIGTLGVVVGKKALAIAR 243 PM T T D LPP+G+ I G VG LA+ R Sbjct: 286 VRFYDINDPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCR 345 Query: 244 ID 245 ++ Sbjct: 346 LE 347 >gi|242777590|ref|XP_002479065.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC 10500] gi|218722684|gb|EED22102.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC 10500] Length = 446 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 53/260 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT------LPYKIARGSAILTPQGKILLYFLISK 59 L+N++ I + G + FLQ +IT ++L P + SA L QG++L I Sbjct: 40 LTNRALIAITGVDSTSFLQGMITQNMLMGKEPVRAPRRTGSYSAFLNSQGRVLHDVFIYP 99 Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 I +E +++E+D+++ +L+ L +KLR+ + + + +WN Sbjct: 100 ITKGNLGHSNESPDEAAWLIEVDKAEVSNLMKHLKKHKLRAKLTLRALEDGEQSIWAAWN 159 Query: 106 QEHTFSN----------SSFIDERFSIADVLLHRTWGHNEK------------------- 136 E T S + + + + R G + Sbjct: 160 NESTEPRWAAYNLESDFPSQLADNSPVVGCIDTRAPGFGTRYITPGPDDLQIHLPAETKL 219 Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + D++TY R +G+ + + + + P + MD+ GI KGCY+GQE+ R Sbjct: 220 QGLQVDLETYKLRRYLYGVAEGQGEIIRESSLPMECNMDVARGIDFRKGCYVGQELTIRT 279 Query: 195 QHRNIIRKR--PMIITGTDD 212 H ++RKR P+ + G D+ Sbjct: 280 HHTGVVRKRILPVQLYGVDE 299 >gi|83594272|ref|YP_428024.1| glycine cleavage T protein (aminomethyl transferase) [Rhodospirillum rubrum ATCC 11170] gi|83577186|gb|ABC23737.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodospirillum rubrum ATCC 11170] Length = 312 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64 ++ + + G + FLQ +++ DV + A +A LTPQGK L F + + E Sbjct: 19 DRGVLGLSGADRVSFLQGLVSNDVTRAGPEQALWAAFLTPQGKYLHDFFVVSVGEGESAR 78 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS----------- 111 +L + ++ + L +L Y+LRS V +++ V+ N + Sbjct: 79 LLLVGEAARLEDLRARLSRYRLRSKVTLDLAGGWTVAVIPGRNAAASLGLPDRPGAMRAL 138 Query: 112 ---NSSFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 +F+D R S A V LL + + R+ G+ + + D P Sbjct: 139 DGGGLAFVDPRLSAAGVHLLLPEAAAKPPLPLGEESLWQAHRLALGLPEGSDDLEPEKAL 198 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDD 224 + + L G+ KGCY+GQE+ +R ++R +++KR P+ I G LP GS + T + Sbjct: 199 LLENGFEELGGVDFKKGCYMGQELTARTKYRGLVKKRLIPVAIDGP--LPAPGSALRTGE 256 >gi|222634911|gb|EEE65043.1| hypothetical protein OsJ_20031 [Oryza sativa Japonica Group] Length = 596 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 47/240 (19%) Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSFIDERF 120 + ++D ++ D L+ Y+LRS V EI ++ L W N EHT S+ E Sbjct: 356 LADVDAAEVDELLACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHT-GPSTQEPEAQ 412 Query: 121 SIADVLLHRTWGHN-----EKIA----------SDIKTYHELRINHGIVDPNTDFLPSTI 165 SI WG E A +D + Y RI +G+ + +T+ Sbjct: 413 SIG-------WGQGVDHAAESAAQAPLVESDKEADERHYLLWRIENGVAEGSTEIPKGEA 465 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--------LPPSG 217 P + LN IS KGCYIGQE+++R HR +IRKR M + D+ + P G Sbjct: 466 IPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQAVAP-G 524 Query: 218 SPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272 S ++ + +IGT+ +G + + + R+++ A+K+ +L + VRVKA P W+ Sbjct: 525 SEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRDVRVKAIKPDWW 581 >gi|89071053|ref|ZP_01158264.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] gi|89043384|gb|EAR49603.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] Length = 243 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK-ILLYFLISKIEEDT 64 +S+++ ++ G + FL ++T +V P R +A+LTPQGK I +FL++ E + Sbjct: 1 MSDRTIFELTGSDRVKFLDNLVTNNV-PAPGDGLRYAALLTPQGKYIADFFLLA--EPER 57 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +++ +L +L Y+LR++V + EI + +F D R Sbjct: 58 LLIDAPAVVAPALAQRLSMYRLRADVALAEID-----LAVRRGTGPAPEGAFADPRHP-- 110 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 L R +G D + LR+ H + + + L + + + LNG+ KG Sbjct: 111 -ALGWRLYGTG--AGDDGTDFDALRVEHVVPEAGRE-LDGDSYVLEMGFERLNGVDFRKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 CY+GQEV +R++H+ +RK + P G+ I++D G L V + LA R Sbjct: 167 CYVGQEVTARMKHKTDLRKGLARVRLEGAAEP-GTEIVSDGRSAGILHTVCASRGLAYVR 225 Query: 244 IDKVDHAIKKGMA 256 D+ + G A Sbjct: 226 YDRATGRMTAGDA 238 >gi|47220333|emb|CAF98432.1| unnamed protein product [Tetraodon nigroviridis] Length = 320 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 36/303 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISK 59 + +L +++ +++ G FLQ +IT DV L P K A + +L QG+ L ++ + Sbjct: 20 ACYHLPHRTVVRLQGPDTGLFLQGLITNDVGLLEEPGKGAMYAHMLNVQGRTLFDIMLYR 79 Query: 60 IEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++E +E D + +L+ YKLR + I P V ++ ++ Sbjct: 80 LKESDAGLGVFVECDSTVEAALLRHFKMYKLRKKLHINPCPELSVWAVLPKQRPTEQAAS 139 Query: 116 IDERFSIADVLLHRTWGHNEKIA--------------------SDIKTYHELRINHGIVD 155 E S L+ T ++ D + YH R G+ + Sbjct: 140 KPELSSPDKGLVLVTDPRTAEMGWRLVLDNQVDPLDIITSCHKGDTEEYHRHRYAIGLPE 199 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG-TDD 212 D P P ++ + + GIS +KGCYIGQE+ +R H ++RKR P+ ++ D Sbjct: 200 GVKDLPPGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKRLMPVCLSAPVQD 259 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI---KKGMALTVHGVRVKASFP 269 L + G VGK L++ R + K A+ V V+AS P Sbjct: 260 LEEGAALQTQSGKPAGKHRAGVGKLGLSLVRTANAKEVLTLKSKNDAV----VTVQASVP 315 Query: 270 HWY 272 W+ Sbjct: 316 DWW 318 >gi|258567086|ref|XP_002584287.1| predicted protein [Uncinocarpus reesii 1704] gi|237905733|gb|EEP80134.1| predicted protein [Uncinocarpus reesii 1704] Length = 348 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 36/240 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISK 59 V L+N++ I + G + FLQ +I+ +V+T + + + L QG++L I Sbjct: 57 VRLTNRALISLTGVDSTAFLQGLISQNVVTPKNRASPTTPFYAGFLNAQGRLLHDTFIYP 116 Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 E +++E+D+++ +L+ +KLRS + + + + W+ Sbjct: 117 TFAPEGSNGADTGSELGYLVELDKAQVSNLMKHFKKHKLRSKLKLRALEEGEKDIWAVWD 176 Query: 106 QEHTFSNSSFIDERFSIADVLLHRT--WGHN---------------EKIASDIKTYHELR 148 + D + + +R +GH + + TYH R Sbjct: 177 NTGNWEAKDSGDVLREVLTCVDNRVPDFGHRLLLDEGSLQSSLELFPGQEASLSTYHLRR 236 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-PMII 207 I HG+ + + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+II Sbjct: 237 ILHGVPEGQDELVRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRYPIII 296 >gi|121713844|ref|XP_001274533.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1] gi|158512623|sp|A1CBI9|CAF17_ASPCL RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|119402686|gb|EAW13107.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1] Length = 450 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 52/274 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARG----SAILTPQGKILLYFLI-- 57 L+N+ I + G + FLQ +IT ++L P + R +A L QG++L I Sbjct: 48 LTNRGLISITGIDSTTFLQGLITQNMLVANDPNRAIRRTGTYAAFLNSQGRVLNDAFIYP 107 Query: 58 --------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108 + E+ +++E+D+ + SL+ L +KLRS + + ++ V S ++H Sbjct: 108 MPRVDGGAAAPEDPAWLVEVDKCEVSSLMKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167 Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139 T + + IA + R G +I + Sbjct: 168 TEPRWAAYNLESESSSQFSPSSPIAGCVDTRAPGFGSRIVTPGGEDLRMHFPDEAQVAGG 227 Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 D+ Y R+ HGI + ++ + + P + MD+ G+ KGCY+GQE+ R H Sbjct: 228 EVDLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMARGVDFRKGCYVGQELTIRTHHT 287 Query: 198 NIIRKR--PM-IITGTDD-LPPSGSPILTDDIEI 227 ++RKR P+ + TG D +P G P +E+ Sbjct: 288 GVVRKRIVPVQLYTGAQDTVPVDGLPAYDSSVEV 321 >gi|71649960|ref|XP_813688.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878596|gb|EAN91837.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 319 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 40/305 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIE- 61 LS++S I+V G +A FLQ + T D+ L + L G+++ + S+++ Sbjct: 7 LSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVDG 66 Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113 E ++++ R D+L D LL ++R + IE VV++ + ++ N Sbjct: 67 GEVCILVDVHRDVVDTLHDHLLDMRMRRRLQIENAGKEFVVVAGS---SYGNGGIYEEEE 123 Query: 114 ------------SFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNT 158 +F+D R L ++ + + Y GI + Sbjct: 124 EEKTPPLSSECETFMDPRSFAFPAPLQKSIFPLSKAPSVTDPVARYETFLYTAGIGEGPD 183 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------G 209 F P+ FP + D L G+S KGCY+GQE+ R + RKR + + G Sbjct: 184 VFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGG 243 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASF 268 G +L D+ ++G L V G L + R+ VD A + L + V V + Sbjct: 244 GRRSVEKGEALLIDERKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITI 303 Query: 269 PHWYK 273 P W++ Sbjct: 304 PGWWE 308 >gi|260428381|ref|ZP_05782360.1| glycine cleavage T protein [Citreicella sp. SE45] gi|260422873|gb|EEX16124.1| glycine cleavage T protein [Citreicella sp. SE45] Length = 244 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 14/250 (5%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + ++V G FLQ ++T DV L + +A+LTPQGK F + ED ++ Sbjct: 4 TRKVLRVSGPETEHFLQGLVTNDVALLKDGLVY-AALLTPQGKYRADFFLVPDGED-ILV 61 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 ++ + L L YKLR+ V I I V + + D R Sbjct: 62 DVAEGLYEGLAKALTMYKLRAKVTISETDI-AVARGPGPAPEGAYADPRDPRMG------ 114 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 W + + + LR+ + + + P T F +A + L+G+ KGCY+G Sbjct: 115 ---WRAYDGRPDESADWDALRVAACVPESGIELTPDT-FILEAGFERLHGVDFRKGCYVG 170 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 QEV +R++H+ +RK ++ + P GS I + G L + +A R D+ Sbjct: 171 QEVTARMKHKVELRKG-LVTVEVNGAAPVGSEITAGEKAAGVLYTQAEGRGIAHLRFDRA 229 Query: 248 DHAIKKGMAL 257 + G A+ Sbjct: 230 GDEMTAGDAV 239 >gi|148259282|ref|YP_001233409.1| glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum JF-5] gi|326402437|ref|YP_004282518.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301] gi|146400963|gb|ABQ29490.1| Glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum JF-5] gi|325049298|dbj|BAJ79636.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301] Length = 275 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 9/238 (3%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 YL + I + G + FLQ +++ DV A SA+LTPQG+ L F I + + Sbjct: 8 AYLPARGVIGIEGPDRVAFLQGLVSNDVTKAEPGRAVWSALLTPQGRYLAEFFI-LTDGE 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNS-SFIDERFS 121 + +L+ LI +L ++LRS V + + V +W + + D R Sbjct: 67 SLLLDAPGVAVPDLIRRLSRFRLRSQVALRDRSDEFAVHAAWGGAPSAPGAIVAADPRLP 126 Query: 122 IADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A HR + D Y R+ G+ D + D P +A L+GI Sbjct: 127 AAG---HRLLAPAPLAGAADETAYRAHRLALGLPD-HDDLEPEKTLLMEAGFGDLHGIDW 182 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQE+ +R ++R ++++R + + DLP +G+ I + E+GTL +G++ Sbjct: 183 DKGCYMGQELTARTRYRGLVKRRLVPVDAEADLPAAGA-ITAGEREVGTLRTSLGRRG 239 >gi|118594673|ref|ZP_01552020.1| Glycine cleavage T protein (aminomethyl transferase) [Methylophilales bacterium HTCC2181] gi|118440451|gb|EAV47078.1| Glycine cleavage T protein (aminomethyl transferase) [Methylophilales bacterium HTCC2181] Length = 298 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 43/290 (14%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S I+V G+ A FLQ IT D+ + + + + P+G++L +F I K+ D+F L Sbjct: 15 SLIEVSGEDASTFLQGQITNDINLVNETTSVYAGLCNPKGRLLAFFHILKLH-DSFFLIC 73 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQ--------EHTFSNSSFIDE 118 + +++ KL Y LRS V+I I + G + E+T + SF+ E Sbjct: 74 PQCIAENIAKKLAMYVLRSKVVIAINTTIRLQGFEFAGEGLCDKVGFPENTNTMQSFLRE 133 Query: 119 RFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST--------- 164 + R G N + S I T+ H +V+ + T Sbjct: 134 GMHVT-----RISGINPRYLCLADNSTITTFMTAHKTH-VVEKTCECWKQTSITNKIPNI 187 Query: 165 -------IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLPP 215 P +DL+N I+ KGCY GQE+V+R + ++KR + +G L Sbjct: 188 YLETQGKFIPQSLNLDLINAINFKKGCYTGQEIVARTHYLGTVKKRLFRGVWSGDKTLLN 247 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARID-KVDHAIKKGMALTVHGVRV 264 G+ ILT++ +G + K+ + + KVD ++K +AL H +R+ Sbjct: 248 LGNEILTNETLVGQVIDYSSDKSESDILFELKVD-SVKDHLALHGHSLRL 296 >gi|19115416|ref|NP_594504.1| iron-sulphur cluster biogenesis protein (predicted) [Schizosaccharomyces pombe 972h-] gi|1351677|sp|Q09929|CAF17_SCHPO RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|1067223|emb|CAA91966.1| iron-sulphur cluster biogenesis protein (predicted) [Schizosaccharomyces pombe] Length = 325 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 38/271 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKI----- 60 S++S I+V G A+ FLQ + T + +TL + G L QG++L F+ K+ Sbjct: 27 SSKSLIRVEGVDAVKFLQGL-TTNKITLDNPVYTG--FLNTQGRVLFDSFIYPKVSNNGT 83 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WN--QEHTFSNS 113 D +EID+ + L Y LRS I P + + W+ +E ++ Sbjct: 84 ENERSDELYVEIDKVAESDFLKHLKKYNLRSRCSIAKIPSEELSIKVIWDVKEESRLKDT 143 Query: 114 SFI--DERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 D RFS +L + T + + Y R +GI + + +PS FP + Sbjct: 144 VAYAKDPRFSKQRLLRMIVPTSTCTSSSSGSLDDYKVFRYRNGIPEGPQEIIPSISFPLE 203 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PS------ 216 + MD + GI KGCY+GQE+ R + + RKR P II +D P PS Sbjct: 204 SNMDWMKGIDFHKGCYLGQELTVRTYYTGVTRKRIFPFIIPNYEDNPSQVIEPSAPLSIV 263 Query: 217 ---GSPILTDDIEIGTLGVVVGKKALAIARI 244 G P+ G + ++GK LA+ R+ Sbjct: 264 AKQGEPV--SRRSPGKIIAILGKVGLALVRL 292 >gi|326517503|dbj|BAK03670.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 399 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 15/146 (10%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR Sbjct: 242 ADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 301 Query: 199 IIRKR--PMIITGTDDLP-----PSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249 +IRKR P+ +D GS ++ D ++GT+ +G + + + R++ Sbjct: 302 VIRKRLLPLKFVDENDQELEQAVAPGSDVVDDASGKKVGTVSTALGSRGMGLLRLEA--- 358 Query: 250 AIKKGMALTV---HGVRVKASFPHWY 272 A+K+ +LT+ VRVKA P W+ Sbjct: 359 ALKENASLTISDNRDVRVKAIKPDWW 384 >gi|119174726|ref|XP_001239704.1| hypothetical protein CIMG_09325 [Coccidioides immitis RS] gi|121752688|sp|Q1DK38|CAF17_COCIM RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor Length = 425 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 41/264 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58 V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+ Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103 Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107 + E+ +++E+D+ + +L+ L +KLR+ + + GV W+ Sbjct: 104 TLPEENGGNEGMELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNA 163 Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149 + D E + AD +G+ +A D + TY RI Sbjct: 164 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLSQPLPGQQASLSTYTLRRI 222 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ + Sbjct: 223 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 282 Query: 208 TGTDDLPP----SGSPILTDDIEI 227 T+D P SG P+ + D ++ Sbjct: 283 YNTEDPKPMPSSSGIPVYSPDSQL 306 >gi|326500300|dbj|BAK06239.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 399 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 15/146 (10%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR Sbjct: 242 ADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 301 Query: 199 IIRKR--PMIITGTDDLP-----PSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249 +IRKR P+ +D GS ++ D ++GT+ +G + + + R++ Sbjct: 302 VIRKRLLPLKFVDENDQELEQAVAPGSDVVDDASGKKVGTVSTALGSRGMGLLRLEA--- 358 Query: 250 AIKKGMALTV---HGVRVKASFPHWY 272 A+K+ +LT+ VRVKA P W+ Sbjct: 359 ALKENASLTISDNRDVRVKAIKPDWW 384 >gi|225561737|gb|EEH10017.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 412 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 46/264 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60 L ++ I V GK + FLQ ++T ++LT +P K +A L G++L I + Sbjct: 47 LPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVP-KSGFYAAFLNAPGRVLHDVFIYPV 105 Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109 + +++E+D+++ +L+ + +KLRS + + + WN+E Sbjct: 106 PPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEEDA 165 Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146 F + F+ D R G EK+ + D TY+ Sbjct: 166 GQLTECDFQLDNGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNL 222 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204 RI +G+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR P Sbjct: 223 RRILYGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILP 282 Query: 205 MIITGTDD-LPPSGSPILTDDIEI 227 + + D+ +P + +P + + ++ Sbjct: 283 VQLYDIDETMPKTETPYYSSESKL 306 >gi|332026993|gb|EGI67089.1| Putative transferase C1orf69-like protein, mitochondrial [Acromyrmex echinatior] Length = 370 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 127/320 (39%), Gaps = 59/320 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEE-D 63 L ++S ++V G A FLQ +IT D+ L + L +G+++ ++ K EE + Sbjct: 42 LIDRSILRVNGNEASFFLQGLITNDMKHLDEGAPSIYTLFLNIRGRVMCDAIVYKSEESN 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------NQEH 108 + +E D DSL L Y++R I+I+ + + W N+ Sbjct: 102 LYYIECDSQIVDSLQRHLKMYRVRRK--IDIEHVGDKINVWSMFNSTKYLDNGAAVNETE 159 Query: 109 TFS--------------NSSFIDERFSIAD---------VLLHRTWGHNEKI-------- 137 F S F+D D +L+ NE I Sbjct: 160 KFKLEGMIFPCGTFNSKTSKFVDNVMIYEDPRLPDLGLRILVESQISRNEIIKHLDADIA 219 Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + + Y R GI + D P P + D L+G+S KGCYIGQE+ +R H Sbjct: 220 PSESLGDYKAFRYKLGIGEGMHDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTARTYH 279 Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIK 252 ++RKR P++ D P + + ++ +G V K L + RI++ A Sbjct: 280 TGVVRKRLMPLLFDNVIDKPFAYDEKILNESGNAVGKFRGCVAKYGLGLMRINESLSA-- 337 Query: 253 KGMALTVHGVRVKASFPHWY 272 L V G+ V+ P W+ Sbjct: 338 --RELNVSGMNVRVVKPAWW 355 >gi|39977165|ref|XP_369970.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15] gi|158514087|sp|A4R8F9|CAF17_MAGO7 RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|145016089|gb|EDK00579.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15] Length = 389 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 23/217 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61 L ++ I V G A +LQ ++TA+++ K +A L QG++L +Y SK + Sbjct: 54 LKSRRLISVSGPDAAKYLQGVVTANIIN-NNKTGFYTAFLNAQGRVLHDVFIYPDASK-D 111 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116 + F++E+D ++ + L + YKLR+ + + + +G W Q S + F Sbjct: 112 GEGFLIEVDATEAERLTRHIKRYKLRAKLNLRLLD-DGEATVW-QAWDDSKADFAPAVGM 169 Query: 117 -----DERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIF 166 D R + + H + D+ +Y R G+ + T+ L Sbjct: 170 TTPVRDPRSPMLGYRVLTPGDHAQTPQLDLDPTPETSYRIRRYLQGVAEGQTEILREHAL 229 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P ++ MD+ I KGCY+GQE+ R +HR ++RKR Sbjct: 230 PAESNMDVTGAIDFRKGCYVGQELTIRTRHRGVVRKR 266 >gi|294925549|ref|XP_002778949.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239887795|gb|EER10744.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 345 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 44/298 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSAI-LTPQGKILLYFLI 57 L ++ IKV GK + FLQ + T D+ + P + + +A+ L+P+G++L L+ Sbjct: 26 LKSRGLIKVSGKGTLNFLQGLCTQDISRVFGAKAEAPMEQSAAAAVFLSPKGRVLFDCLM 85 Query: 58 ----------------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV 101 E++ ++++D D+++ LF + R ++ + I+ ++ + Sbjct: 86 YSGVSLKPDSSEGIVSDDKGEESLVVDVDEGVLDNVM--RLFIRHRVHLPLNIEKLDNLG 143 Query: 102 LSWNQEHTFSNSSF-----IDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVD 155 + W + + + E + D+ L ++ A + Y LRI + + Sbjct: 144 VYWTPSKSQNGCDGDTEVPVYEDPRVKDLGLRAILPKSDIDAESTEALYRRLRIGLVVPE 203 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213 + P + P + +DL N I+ KGCYIGQE+ +R + +RKR M I G D+ Sbjct: 204 GPKEMTPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKRLFGMRIDGDVDV 263 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVRVKAS 267 SG+ I+ D +IG + + + L IA+I HA KGM + V+A+ Sbjct: 264 -ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA-PKGMQMNTKQAMVEAT 315 >gi|226530732|ref|NP_001147280.1| aminomethyltransferase [Zea mays] gi|195609448|gb|ACG26554.1| aminomethyltransferase [Zea mays] Length = 407 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 15/146 (10%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR Sbjct: 250 ADERHYQLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 309 Query: 199 IIRKRPMIITGTD-------DLPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249 +IRKR M + D GS ++ + ++G + +G + + + R+++ Sbjct: 310 VIRKRLMPMKFVDGNGQELEQAVAPGSEVVDEASGKKVGAVSTALGSRGMGLLRLEE--- 366 Query: 250 AIKKGMALTVHG---VRVKASFPHWY 272 A+K G AL G VRV+A P W+ Sbjct: 367 ALKPGSALRAGGNRDVRVQAIRPDWW 392 >gi|156058962|ref|XP_001595404.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980] gi|154701280|gb|EDO01019.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980 UF-70] Length = 411 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/349 (22%), Positives = 134/349 (38%), Gaps = 94/349 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59 LS + I + G + +LQ +IT D+ K SA L QG++L I + Sbjct: 71 LSTRRLISLRGPDSTKYLQGVITNDIYKEGNKNGFYSAFLNAQGRVLNDVWIYRDIYADL 130 Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-------------------- 94 E D +++E+D + + L + Y++R+ ++I Sbjct: 131 KGDKTTEGDNWLIEVDAKQVEVLAKHIKRYRMRAKFDVDIVDEEEKKIYSLWGTKVGVRV 190 Query: 95 ---------QPINGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIAS 139 + G+V S + N +++ + + A+V +H G N Sbjct: 191 IDAQERDREKAQQGIVTSDTRAPGMGNRVIVNKGWHMHMDIQDAEVQMH---GEN----- 242 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 Y R G+ + + L + P ++ +D++ GI TKGCY+GQE+ R H + Sbjct: 243 ---VYRARRYLIGVPEGQDEILRESALPQESNIDVMGGIDYTKGCYVGQELTIRTHHTGV 299 Query: 200 IRKR---PMIITGTDDLPPSG---------SPILTDDIEIGTLG---------VVVGKKA 238 IRKR M++ +D+P G + L I +G VG Sbjct: 300 IRKRIVPMMLVPDGEDMPGLGELKYKGGHLASWLNGGENIKKVGGKRPVGKWLSGVGNLG 359 Query: 239 LAIARIDK-------------VDHAIKKGMAL---TVHGVRVKASFPHW 271 L +AR+D+ VD + +G V +RV+A P W Sbjct: 360 LGLARLDEMGKWMVEEKEAGGVDEFVAEGKGEKEGEVRNIRVRAFPPAW 408 >gi|169613713|ref|XP_001800273.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15] gi|121935220|sp|Q0UE25|CAF17_PHANO RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|111061204|gb|EAT82324.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15] Length = 406 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 35/224 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYF-------LI 57 L ++S I + G +A FL +IT D + P+ +A L +G+++ LI Sbjct: 59 LPHRSLIFLSGPTASKFLHGLITHDATRVSPFY----AAFLDARGRVICDVFIWVWPELI 114 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSN 112 ++ +E+D + ++L+ L +KLR + I P G V +W H Sbjct: 115 AQQGHWACYIEVDAGQANALMLHLKRHKLRHKLTISHVPAEGRDGIKVWAAWGDAH---- 170 Query: 113 SSFIDERFSIADVLLHRTWG--------HNEKIASDI-----KTYHELRINHGIVDPNTD 159 + + IA + R G E IA D+ K Y R HG+ + + + Sbjct: 171 -KQVKDWGEIAGLQDPRAPGMYRYLANADRETIARDMQPVDTKFYDIQRYIHGVPEGSAE 229 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P + P +A +DL +GI KGCYIGQE+ R +H ++RKR Sbjct: 230 MPPYSTLPMEANIDLSSGIDFKKGCYIGQELTIRTKHTGVVRKR 273 >gi|220934636|ref|YP_002513535.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] gi|219995946|gb|ACL72548.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] Length = 354 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 36/283 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+Q I G+ A FLQ + DVL L + ++ TP+G++L F + + E ++ Sbjct: 43 LSHQGLIVAYGEEAGSFLQGQFSNDVLGLASAHSHLNSYCTPKGRMLANFRVFRRGE-SY 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L + R+ +S++ +L + LRS V +E + + LS + ++ D ++ Sbjct: 102 YLRMPRAMVESVLKRLRMFVLRSKVTLEDADDALVRIGLSGPRAVEELQTALGDVPSAVN 161 Query: 124 DVLLH------RTWGHNEK------IASDIKTYHELRINHGIVD-------------PNT 158 DVL H R G + + + + + +++L + V PN Sbjct: 162 DVLHHNDITAIRVPGPHPRFELYGELEAMKQLWNKLNVRCAPVGAGPWALLDILAGIPNV 221 Query: 159 DFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216 S F P A M L+ G+S KGCY GQEVV+R+ + +++R +T D PP+ Sbjct: 222 TPATSEAFVPQMANMQLIGGVSFKKGCYPGQEVVARMHYLGKLKRRMYRVTIDTDQPPAP 281 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 G+ IL G G + A +D H K MAL V Sbjct: 282 GTEIL------GAGGGETEEDQAAGRIVDAQLHPDGKVMALAV 318 >gi|242094558|ref|XP_002437769.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor] gi|241915992|gb|EER89136.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor] Length = 414 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 16/147 (10%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR Sbjct: 256 ADERHYQLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 315 Query: 199 IIRKRPMIITGTDD--------LPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVD 248 ++RKR M + D+ + GS ++ + +IGT+ +G + + + R+++ Sbjct: 316 VVRKRLMPMKFVDENGQELEEAVVAPGSEVVDEASGKKIGTVNTALGSRGMGLLRLEE-- 373 Query: 249 HAIKKGMALTV---HGVRVKASFPHWY 272 A+K G AL + V+V+A P W+ Sbjct: 374 -ALKPGSALRISDNRDVKVQAIKPDWW 399 >gi|300113362|ref|YP_003759937.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113] gi|299539299|gb|ADJ27616.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113] Length = 347 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 48/285 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ A FLQ ++T DV + + ++ + + P+G++L F + + + + Sbjct: 43 LSHLGLITVSGEDASDFLQNLLTNDVKEVNSQHSQLTGLCNPKGRLLAIFRLFQWNANLY 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------------------EIQPING-VVLSWN 105 L + S ++++ +L Y LR+ V + E++ G V ++ N Sbjct: 103 -LRLPHSLLEAVLKRLSMYVLRAQVSLADVSDHFCRFGLVGSKARDELKRYLGRVPMAVN 161 Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDIKTYH----ELRINHGIV 154 + + + RF + L + W K A+ T+ +R + Sbjct: 162 EVQQTPDCCVLRVPGKPSRFEVVGEFDTLQKLWDELSKTATPAGTHFWELATIRAGVATI 221 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213 P T ++ P ++L GIS TKGCY GQEV++R+ +R +R + TGTD Sbjct: 222 YPETQ---ASFIPQQVNLELKEGISFTKGCYPGQEVIARMHYRGKPSRRMFLAHTGTDQQ 278 Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK-----------ALAIARIDK 246 P G PI L +D +G +V + L +AR++K Sbjct: 279 PQPGDPIYLANDEAKQVIGEIVTAQPAPEGGYDSLVVLQLARLEK 323 >gi|115466238|ref|NP_001056718.1| Os06g0134800 [Oryza sativa Japonica Group] gi|55296974|dbj|BAD68449.1| glycine cleavage T protein-like [Oryza sativa Japonica Group] gi|55297200|dbj|BAD68874.1| glycine cleavage T protein-like [Oryza sativa Japonica Group] gi|113594758|dbj|BAF18632.1| Os06g0134800 [Oryza sativa Japonica Group] gi|215686575|dbj|BAG88828.1| unnamed protein product [Oryza sativa Japonica Group] Length = 401 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 110/371 (29%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---------------GSAILTP 47 + L++++ ++ G A FL++++T D+L R +A+LTP Sbjct: 25 ACRLASRAVVRFAGPEAGRFLRSLLTNDLLLSSSSQQRYAPTPNAPARAPPPAYAALLTP 84 Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77 QG+ L + + + +L+ +D ++ D L Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSS------------------ 114 + Y+LRS V EI ++ L W N EHT ++ Sbjct: 145 LACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAE 202 Query: 115 ------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIV 154 F D R D L +R I +D + Y RI +G+ Sbjct: 203 SAAQGNGHGWEWFKDPRL---DCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVA 259 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212 + +T+ P + LN IS KGCYIGQE+++R HR +IRKR M + D+ Sbjct: 260 EGSTEIPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENG 319 Query: 213 ------LPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HG 261 + P GS ++ + +IGT+ +G + + + R+++ A+K+ +L + Sbjct: 320 QELKQAVAP-GSEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRD 375 Query: 262 VRVKASFPHWY 272 VRVKA P W+ Sbjct: 376 VRVKAIKPDWW 386 >gi|71664696|ref|XP_819326.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884622|gb|EAN97475.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 320 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 41/306 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIE- 61 LS++S I+V G +A FLQ + T D+ L + L G+++ + S++ Sbjct: 7 LSSRSLIRVSGAAAHDFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVHG 66 Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113 + ++++ R D+L D LL ++R + I+ VV++ + ++ N Sbjct: 67 GDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVAAS---SYGNGGIYEAEE 123 Query: 114 -------------SFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPN 157 +F+D R LH++ + + Y GI + Sbjct: 124 EEEKTPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGP 183 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215 F P+ FP + D L G+S KGCY+GQE+ R + RKR P+ + + Sbjct: 184 DVFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETG 243 Query: 216 S-------GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKAS 267 S G +L D ++G L V G L + R+ VD A + L + V V + Sbjct: 244 SGRRSVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLEDDVPVVIT 303 Query: 268 FPHWYK 273 P W++ Sbjct: 304 IPGWWE 309 >gi|269958426|ref|YP_003328213.1| aminomethyl transferase family protein [Anaplasma centrale str. Israel] gi|269848255|gb|ACZ48899.1| aminomethyl transferase family protein [Anaplasma centrale str. Israel] Length = 271 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 17/275 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59 M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAREPIYNLILNPRGRYVFDFFLIP- 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 E F+L+ + D+L + L Y+L+ V ++ V N++ ++ Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDA 118 Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D + W I D + Y LRI I + D + + FP Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 MD LN ISL KGCYIGQE+V+R+ +K + + T L G I G + Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTKTL-VCGQEIFAQGQPAGHM 237 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + L + ++K I G L G +K Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268 >gi|255537089|ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis] gi|223549510|gb|EEF50998.1| aminomethyltransferase, putative [Ricinus communis] Length = 391 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 80/364 (21%), Positives = 141/364 (38%), Gaps = 102/364 (28%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS------------------A 43 S+ L+++S I+ G + FLQ ++T D+ + + A Sbjct: 22 STSLLNSRSVIRFSGPDTVKFLQGLLTNDIRRFDETPSEATSFLPTPNLATVSVPPMYAA 81 Query: 44 ILTPQGKILLYFLI--------------SKIEEDT-----FILEIDRSKRDSLIDKLLFY 84 +LTPQG+ L + S D+ + ++D S D L+ Y Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPGSDSNGSVELLADVDTSVLDELLHTFQRY 141 Query: 85 KLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---- 139 +LRS V EI+ + G W + + +S + + A V WG A+ Sbjct: 142 RLRSKV--EIENVAGEFSCWQRFGGNLTETSKVADEPEAASV----GWGSGVDRAARSST 195 Query: 140 ---------------------------------------DIKTYHELRINHGIVDPNTDF 160 + K Y RI +G+ + +T+ Sbjct: 196 QGDGHGWQWFKDPRLDCLGFRGIFPSNQTPPLVEADKETNEKNYQLWRIENGVAEGSTEI 255 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII-----TGTDDL 213 P + + LN IS KGCY+GQE+V+R HR +IRKR P++ T ++ Sbjct: 256 PKGEAIPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDNGTEVEEK 315 Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASF 268 GS ++ T ++G + +G + L + R+++ A K +L + G ++V+ Sbjct: 316 VAPGSEVIDTTSSKKVGFVTAALGCRGLGVLRLEE---AWKGSGSLIIEGQDDLKVETIR 372 Query: 269 PHWY 272 P W+ Sbjct: 373 PKWW 376 >gi|218197511|gb|EEC79938.1| hypothetical protein OsI_21522 [Oryza sativa Indica Group] Length = 401 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 110/371 (29%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---------------GSAILTP 47 + L++++ ++ G A FL++++T D+L R +A+LTP Sbjct: 25 ACRLTSRAVVRFAGPEAGRFLRSLLTNDLLLSSSTQQRYAPTPNAPARAPPPAYAALLTP 84 Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77 QG+ L + + + +L+ +D ++ D L Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSS------------------ 114 + Y+LRS V EI ++ L W N EHT ++ Sbjct: 145 LACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAE 202 Query: 115 ------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIV 154 F D R D L +R I +D + Y RI +G+ Sbjct: 203 SAAQGNGHGWEWFKDPRL---DCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVA 259 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212 + +T+ P + LN IS KGCYIGQE+++R HR +IRKR M + D+ Sbjct: 260 EGSTEIPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENG 319 Query: 213 ------LPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HG 261 + P GS ++ + +IGT+ +G + + + R+++ A+K+ +L + Sbjct: 320 QELKQAVAP-GSEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRD 375 Query: 262 VRVKASFPHWY 272 VRVKA P W+ Sbjct: 376 VRVKAIKPDWW 386 >gi|297809523|ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata] gi|297318482|gb|EFH48904.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata] Length = 393 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 93/352 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------------------SAILTP 47 L ++S ++ G + FLQ ++T DV +A+LTP Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVSTPPMYAALLTP 94 Query: 48 QGKILLYFLI---SKIEED------------------TFILEIDRSKRDSLIDKLLFYKL 86 QG+ L F + SK EE ++D D L++ L Y+L Sbjct: 95 QGRFLYDFFLYSPSKSEEKLNRTGSGPGSDSGHDGSVELFADVDVDVLDELLETLKKYRL 154 Query: 87 RSNVIIEIQPINGVVLSWNQ---------------------EHTFSNSSF-----IDERF 120 RS V +I+ + W + E T S + + D R Sbjct: 155 RSKV--DIENVGEEFSCWQRYGRNLSGSSSVGWGGGVDRAGESTASGNKYGWQWYKDPRL 212 Query: 121 SI--------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 AD E +D Y R+ HG+ + + + P + Sbjct: 213 ECLGYRSIFPADATPPLVEADKE---TDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PSGSPILTDDI 225 LN IS KGCY+GQE+++R HR +IRKR P+ ++ +G+ ++ Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKEVNQKIAAGAEVVESGT 329 Query: 226 --EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272 ++GT+ +G + + + R V+ A K LTV V+V+A P W+ Sbjct: 330 GKKMGTVSTALGSRGMGVMR---VEEAFKPSAELTVKDLEDVKVEAIRPTWW 378 >gi|83644620|ref|YP_433055.1| aminomethyltransferase GcvT-like protein [Hahella chejuensis KCTC 2396] gi|83632663|gb|ABC28630.1| predicted aminomethyltransferase related to GcvT [Hahella chejuensis KCTC 2396] Length = 330 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 38/272 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N + +++ G A+ F+Q T D+ + + +A TP+G+++ F I++ + D + Sbjct: 29 LTNVALLEIKGPDAVKFMQGQFTCDIQEITISHSSLAACCTPKGRMVALFRIAQAKPDCY 88 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFI----DERF 120 +L + S + L YK+ + + GV+ LS + + S SS + D Sbjct: 89 LLRLPVEVAQSFLAHLNKYKVFYKCTVTLLEDWGVIGLSGDLDSLPSLSSAVPTSADSCQ 148 Query: 121 SIADVLLHRTWGH---------------------NEKIASDIKTYHELRINHGI--VDPN 157 + +LL R G+ N+ A ++ + L + G+ V P Sbjct: 149 TSDGLLLIRPPGNLSRMECWLDSAQASKLLPDLDNQCAAGAVEDWERLEVLSGLGEVYPQ 208 Query: 158 T--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T +F+P + + L IS KGCY GQE+V+R+Q+ ++KR +++ P Sbjct: 209 TLDEFIPQMLN-----LQALGAISFKKGCYTGQEIVARMQYLGTLKKRMFLLSSETITPA 263 Query: 216 SGSPILTD-DIEIGTLGVVVGKKALAIARIDK 246 GS I+ + IG+ VV + +A +DK Sbjct: 264 PGSAIIDETGARIGS--VVRSAQGQTLAVLDK 293 >gi|189199100|ref|XP_001935887.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982986|gb|EDU48474.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 428 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 39/273 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYF-------LI 57 L ++ I + G A FLQ +IT +V L P +A L QG++L L+ Sbjct: 98 LPHRRLISLSGPDAAKFLQGLITNNVDLNQPKPFY--AAFLNAQGRVLWDVFVWVWPELL 155 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFI 116 ++ ++ T +E+D + + L L +KLRS V EI+ I+G V W + +++ + Sbjct: 156 AEEKQWTCYIEVDEREAEELKKHLKRHKLRSKV--EIEDISGDEVCVWAAWGSAADAR-V 212 Query: 117 DERFSIADVLLHRTWGHNEKIA-SDIKT------------YHELRINHGIVDPNTDFLPS 163 + ++ D+ R + +A +D+K Y R +GI + + Sbjct: 213 NANDTMVDMQDPRAPNFHRYLAYADVKALVPGTEPLSVTEYQIERYRYGIAEGPDEIPRE 272 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + DL +GI KGCY+GQE+ R +H ++RKR + IT L P P+ Sbjct: 273 DALPMEYNFDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITL--QLHPLAEPVEKI 330 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 +E G+ I ID +K+G A Sbjct: 331 IVESGS----------EIKTIDDTQIGLKRGRA 353 >gi|87198956|ref|YP_496213.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444] gi|87134637|gb|ABD25379.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444] Length = 248 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 16/189 (8%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ ++T DV + + +A+LTPQGK+L F++ + +LE + S D+L +L Sbjct: 29 FLQGLVTNDVKGV---LPVWTALLTPQGKVLFDFIVWP-DGKGLLLECEASAADALAKRL 84 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIA 138 Y+LR I I + + W +S D R L + W + + Sbjct: 85 TLYRLRRK--IAISRADDLAAHWEDHPGDGGAS--DPRLRA----LGQRWIAPVSDNDVG 136 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 D+ Y E R+ G+ + + + + LNG+S TKGCY+GQE +R+ R Sbjct: 137 VDM-AYREHRLKLGVPEGRAELGDGEVLWLECNAADLNGVSFTKGCYVGQENTARMNWRQ 195 Query: 199 IIRKRPMII 207 + +R +++ Sbjct: 196 KVNRRLIVV 204 >gi|56552584|ref|YP_163423.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4] gi|56544158|gb|AAV90312.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4] Length = 274 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 3/209 (1%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L Sbjct: 38 FLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDFILWA-EGSSILIDCESAIADNLIRRL 96 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 Y+LR + IEI P V S N + SSF D R S + ++ A I Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSFPDPRLSELGFRWLQPATDSQPSAEAI 156 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R +I L I D+++ + Sbjct: 215 RRLAVIKTDHPLDDDKCRIYYSDLKLAVM 243 >gi|56417181|ref|YP_154255.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries] gi|56388413|gb|AAV87000.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries] Length = 271 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 17/275 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59 M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIP- 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 E F+L+ + D+L + L Y+L+ V ++ V N++ ++ Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDA 118 Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D + W I D + Y LRI I + D + + FP Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 MD LN ISL KGCYIGQE+V+R+ +K + + T+ L G I G + Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTNTL-VCGQEISAQGQPAGHM 237 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + L + ++K I G L G +K Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268 >gi|224124952|ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|222871091|gb|EEF08222.1| predicted protein [Populus trichocarpa] Length = 392 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 96/357 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----------------TLP--YKIARGSAILTP 47 L ++S I+ G I FLQ ++T DV LP Y +A LTP Sbjct: 27 LKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGTTSYVPTPNLPSVYVPPMYAAFLTP 86 Query: 48 QGKIL--LYFLISKIEEDTFI-------------LEIDRSKRDSLIDKLLF----YKLRS 88 QG+ L L+ + E+ LE+ S++D+LL Y+LRS Sbjct: 87 QGRFLYDLFLYRKPLGEEKLDGSGSGPGSDSGGDLELFADVDSSVLDELLLTFKRYRLRS 146 Query: 89 NVII-----------------------EIQPINGVVLSW-NQEHTFSNSS---------F 115 V I E +P V S +H+ +SS F Sbjct: 147 KVEIDNVAEDFSCWQRFGGNLAEKSKGEEEPEAASVGSGPGVDHSAMSSSHGNDVGWQWF 206 Query: 116 IDERFSIADVL-LHRTWGHNEK---IASDIKT----YHELRINHGIVDPNTDFLPSTIFP 167 D R D L L + E + SD +T Y RI +GI + +T+ P Sbjct: 207 KDPR---VDCLGLRGVFPSKETPPLVESDKETNELNYLLWRIENGIAEGSTEIPIGEAIP 263 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--------LPPSGSP 219 + ++ LN IS KGCY+GQE ++R HR +IRKR + + DD + P Sbjct: 264 LEYNLEGLNAISFDKGCYVGQEFIARTHHRGVIRKRLLSLAFLDDSGKEVEQKVGPGSEV 323 Query: 220 ILT-DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 I T +IG + +G + L + R+ + A K +LT+ G ++V+A P W+ Sbjct: 324 INTASGKKIGYVTTALGCRGLGVLRLKE---AFKGSGSLTIQGQEDIKVEAIRPKWW 377 >gi|222475546|ref|YP_002563963.1| hypothetical protein AMF_881 [Anaplasma marginale str. Florida] gi|254995349|ref|ZP_05277539.1| hypothetical protein AmarM_05374 [Anaplasma marginale str. Mississippi] gi|255003537|ref|ZP_05278501.1| hypothetical protein AmarPR_04834 [Anaplasma marginale str. Puerto Rico] gi|255004662|ref|ZP_05279463.1| hypothetical protein AmarV_05199 [Anaplasma marginale str. Virginia] gi|222419684|gb|ACM49707.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 271 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 17/275 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59 M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIP- 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 E F+L+ + D+L + L Y+L+ V ++ V N++ ++ Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDEYAVAVHPNTVDSGNAANFEDA 118 Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D + W I D + Y LRI I + D + + FP Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 MD LN ISL KGCYIGQE+V+R+ +K + + T L G I G + Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTKTL-VCGQEIFAQGQPAGHM 237 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + L + ++K I G L G +K Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268 >gi|320592852|gb|EFX05261.1| aminomethyltransferase [Grosmannia clavigera kw1407] Length = 409 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 31/229 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISK-- 59 L+++ I V G A FLQ IITA+++ AR SA L QG++L + + Sbjct: 54 LASRRLISVAGPDAAKFLQGIITANMVPAAGASARPHGFYSAFLNSQGRVLHDVFVYRNT 113 Query: 60 -----IEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ----E 107 +E D F++E+D + +L + Y+LR+ V +++ + + + +W + Sbjct: 114 LSRPAVEIDPAFLVEVDAEQARTLEKHMRRYRLRAKVDVQLLDDDELAVWHAWGEGAASA 173 Query: 108 HTFSNSSFIDERFSIADVLLHR-TWGHNEKI------------ASDIKTYHELRINHGIV 154 + ++ + ++ D W H A D Y R G+ Sbjct: 174 AAAAAATASPDVITVCDTRAPGLGWRHVAASSGLPPPLALAVDAVDEFAYRIRRYLWGVA 233 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + + P P ++ +DL+ GI KGCY+GQE+ R +HR ++RKR Sbjct: 234 EGQREIQPGQALPLESNIDLMGGIDFHKGCYVGQELTIRTRHRGVVRKR 282 >gi|307190794|gb|EFN74663.1| Putative transferase C1orf69, mitochondrial [Camponotus floridanus] Length = 371 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 59/320 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEE-D 63 L+++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K EE + Sbjct: 42 LNDRSILRVSGNEASTFLQGLITNDMKHLVEGTSNIYTLFLNIRGRVMYDAIVYKTEESN 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDERF 120 + +E D +SL L Y++R V +I+ I + W + + N +DE Sbjct: 102 MYYIECDLQVVESLQRHLQMYRIRRKV--DIKHIGDKINVWSMFDSTKRYDNRPAVDENG 159 Query: 121 S--------------------IADVLLH----------RTWGHNE--------KIASDI- 141 I +++++ R ++ + SD+ Sbjct: 160 KRQLEGMIFPCGTLNSKASKFIDNIMIYEDPRLPDLGLRILAESQIDKREITKHLDSDVF 219 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y R GI + D P P + D L+G+S KGCY+GQE+ +R H Sbjct: 220 LSENVANYKAFRYKLGIGEGVHDLPPGKALPLEINCDYLHGVSFHKGCYVGQELTARTYH 279 Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDIE--IGTLGVVVGKKALAIARIDKVDHAIK 252 ++RKR P++ D P + + D+ + +G + K L + RI++ A + Sbjct: 280 TGVVRKRLMPLMFDSIVDKPLAYDEKILDESDNVVGKFRGYIDKYGLGLMRINESLSARR 339 Query: 253 KGMALTVHGVRVKASFPHWY 272 L V G+ +K P W+ Sbjct: 340 ----LNVLGINLKVVKPTWW 355 >gi|296422045|ref|XP_002840573.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636792|emb|CAZ84764.1| unnamed protein product [Tuber melanosporum] Length = 388 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 68/332 (20%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI----------- 57 + I++ G+ A +LQ + T D+ + SA L QGK+L I Sbjct: 38 RQLIEIHGRDAPKYLQGLTTGDIPMQSDSLGTYSAFLNAQGKVLYDIFIYPTNRNHRWRA 97 Query: 58 ------------------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN- 98 +++E F +E D D+L++ + YKL S + P Sbjct: 98 QIEQKNFQPPGCPPTKKGPEVDEPGFFIECDIRSADALLNHIRRYKLSSKFHSRLIPKGE 157 Query: 99 -GVVLSWNQEHTFSNS----SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + W+ S D R + G N + D++ Y+ R+ HG+ Sbjct: 158 WDMWAIWDDHRLLPTSLGEIGCTDTRAPNLGKRVAVFGGKNIGVEVDVEVYNVRRMLHGV 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + + L ++ MD + G+ KGCY+GQE+ R H ++RKR P+ + + Sbjct: 218 PEGQNEILNGGNIAQESNMDYMGGVDFRKGCYVGQELTIRTHHTGVVRKRVLPVQLFRPE 277 Query: 212 DLPPSG---------SPILTDDI-----------EIGTLGVVVGKKALAIARID------ 245 D P +P+L + G VG LA+ R++ Sbjct: 278 DPVPEKLTYDPNLDLAPLLPGETLNISKLEESGRSAGKFLRGVGNIGLALCRLEIMTDLE 337 Query: 246 ---KVDHAIKKGMALTVHG--VRVKASFPHWY 272 K + L V G +RVKA P W+ Sbjct: 338 NGRKREGKTVPEFKLDVEGSELRVKAFVPEWH 369 >gi|170090854|ref|XP_001876649.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648142|gb|EDR12385.1| predicted protein [Laccaria bicolor S238N-H82] Length = 370 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 51/256 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61 + N+ I V G A FL ++++ + ++ SA+L QG++L LY + Sbjct: 18 IPNRGIISVFGSQAFSFLNGLLSSSIGPQD-NGSQFSAVLNAQGRVLYDVFLYPSTNSAG 76 Query: 62 EDTFILEIDR--SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW----------NQEH 108 + + LE D S+ L+ L + LRS V + ++ + SW ++ Sbjct: 77 KPGYFLEYDNRLSEAPPLLSYLKRHILRSKVQVRDVSEDYTLWASWGATEDQVWETQRQW 136 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASD--------------------IKTYHEL- 147 +++ S ++ + D + WG +E I D ++ Y + Sbjct: 137 SWARSGALE---PVWDNPTYSPWGTDENIIHDRRAVGMGRRHLLKADQGSKVLRDYETVD 193 Query: 148 -------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 RI HG+ + N D T FP D+ +D + G+ KGCY+GQE+ R H II Sbjct: 194 SEAYLLHRIIHGVPEGNMDIPAMTAFPMDSNLDAMGGLDFRKGCYVGQELTVRTYHTGII 253 Query: 201 RKR--PMIITGTDDLP 214 RKR P+++ D+ P Sbjct: 254 RKRTFPVLLHKPDENP 269 >gi|320037549|gb|EFW19486.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 425 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 41/264 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58 V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+ Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103 Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107 + E+ +++E+D+ + +L+ L +KLR+ + + GV W+ Sbjct: 104 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 163 Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149 + D E + AD +G+ +A D + TY RI Sbjct: 164 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRI 222 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ + Sbjct: 223 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 282 Query: 208 TGTDDLPPSGS----PILTDDIEI 227 T+D P S P+ + D ++ Sbjct: 283 YNTEDPKPMPSSLRIPVYSPDSQL 306 >gi|168048459|ref|XP_001776684.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671976|gb|EDQ58520.1| predicted protein [Physcomitrella patens subsp. patens] Length = 427 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 9/134 (6%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ + +T+ P + + LN IS KGCY+GQE+V+R HR +IRKR M + Sbjct: 278 RLEQGVAEGSTEIPKGEAIPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLMPL 337 Query: 208 TGTDDLPPS-------GSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258 + TD G+ +L I ++G + V+G +AL + R++ + Sbjct: 338 SFTDTNGKEAQAAVAVGAEVLDKRIGKKVGKVSTVLGPRALGMIRLESAREGNNQLCIEN 397 Query: 259 VHGVRVKASFPHWY 272 H + VKA P W+ Sbjct: 398 QHDILVKAVRPKWW 411 >gi|88607941|ref|YP_505789.1| aminomethyl transferase family protein [Anaplasma phagocytophilum HZ] gi|88599004|gb|ABD44474.1| aminomethyl transferase family protein [Anaplasma phagocytophilum HZ] Length = 275 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 16/208 (7%) Query: 4 VYLS-NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++LS ++ IKV G A FL I T DVL + A + IL +G+ L F + K ++ Sbjct: 1 MFLSQSRGVIKVSGADAAKFLHNITTNDVLQMESPSAVYNLILNSKGRFLFDFFLIKCDK 60 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-------HTFSNSSF 115 F+L+ +R +I+ L Y++ V I+ V L Q T + + Sbjct: 61 H-FLLDCEREAIMPIIELLRLYRVVLKVKIKSCDEYSVALDTKQRLGDPGYTKTLEDGTI 119 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHD 169 + + ++ + H + D+ T Y LR+ + I + TD + FP Sbjct: 120 VFQDPRCVNMGVRYIVPHTSSVQYDMPTSQTNTEYSMLRMVNTIPNCATDMVSGESFPLH 179 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D LN IS TKGCY GQEVV+R+ HR Sbjct: 180 FGLDKLNAISHTKGCYTGQEVVARM-HR 206 >gi|260753760|ref|YP_003226653.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553123|gb|ACV76069.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 274 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 3/209 (1%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L Sbjct: 38 FLQGLVTQDVFLLEKGEPLWSALLTAQGKVLYDFILWP-EGSSILIDCESAIADNLIRRL 96 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 Y+LR + IEI P V S N + SSF D R S + ++ A I Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSFPDPRLSELGFRWLQPATDSQPSAEAI 156 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R +I L I D+++ + Sbjct: 215 RRLAVIKTDHPLDDEKCRIYYSDLKLAVM 243 >gi|225426884|ref|XP_002262786.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 407 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 13/145 (8%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR Sbjct: 250 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 309 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR--------IDKVDHA 250 +IRKR + + DD + E+ + V GKKA + + +++ A Sbjct: 310 VIRKRLLPLKFLDDSGKEMEQKVAPGSEV--INAVSGKKAGTVTTALECRGLGLLRLEEA 367 Query: 251 IKKGMALTVHG---VRVKASFPHWY 272 +K LT+ G V+V+A P W+ Sbjct: 368 LKGPSKLTIQGQEDVKVEAIRPEWW 392 >gi|170571134|ref|XP_001891614.1| aminomethyltransferase [Brugia malayi] gi|158603797|gb|EDP39585.1| aminomethyltransferase, putative [Brugia malayi] Length = 275 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 12/238 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ ++ GK FLQA++T D+ L A+ + +L +G+I+ ++ + + D Sbjct: 9 LRHRGLLRAKGKEVFQFLQALVTNDIRRLVDGQAQYALLLNNRGRIVEDLILYR-QADEI 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIAD 124 ++E DRS + L +K+ +V IE + + T D R S Sbjct: 68 LIESDRSNQLKLRKLFEMFKIHKDVTIE--EVTERYVYHADSATNBIPGIQDPRVPSFGK 125 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVD-PNTDFLPSTIFPHDALMDLLNGISLTKG 183 +L + ++ + D Y E R + GI + PN +F + D++NG+S KG Sbjct: 126 RILSKILPDDQTV--DENAYRERRFDFGIPEGPNEVAGELPLFMN---ADIMNGVSANKG 180 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 CY+GQE+ +R + IRKR + T + + +G+ I +D G + G+K LA+ Sbjct: 181 CYLGQELTARALNAPEIRKRLLPFTCKNMV--TGTLINSDGRRAGKVIACTGRKGLAL 236 >gi|157423031|gb|AAI53525.1| Zgc:153540 protein [Danio rerio] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 33/258 (12%) Query: 44 ILTPQGK----ILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L QG+ I+LY L E + +LE D + +DS++ L YK+R V + + P Sbjct: 16 VLNVQGRTLYDIILYSLKGNPEGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLNVCPSL 75 Query: 99 GV--VLSWNQEH-------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------- 141 + +L ++E T ++ + E+ +++ R + DI Sbjct: 76 SLWALLPHSKEAILGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGN 135 Query: 142 -KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H +I Sbjct: 136 TEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVI 195 Query: 201 RKR--PMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 RKR P+ ++ + GS + T+ + G V K L++ R+ HA K+ + L Sbjct: 196 RKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQL 251 Query: 258 TVHG---VRVKASFPHWY 272 G V V+AS P W+ Sbjct: 252 KSSGDETVTVQASVPDWW 269 >gi|71019851|ref|XP_760156.1| hypothetical protein UM04009.1 [Ustilago maydis 521] gi|74701127|sp|Q4P7A4|CAF17_USTMA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|46099873|gb|EAK85106.1| hypothetical protein UM04009.1 [Ustilago maydis 521] Length = 403 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 44/229 (19%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL---------PYKIARGSAILTPQGKILLYFLIS 58 ++ ++V G+ + LQ +++ DV L P + G + PQG++L I Sbjct: 57 HRGVVQVSGRDTVKLLQGLVSNDVKALDSTTLTHQPPNMVYAG--FMNPQGRMLADVFIH 114 Query: 59 KIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEH---- 108 + + ++L+ID SL+ + +KLRS V + ++ VV +W+ Sbjct: 115 RQPANQDGSPRWLLDIDSRTLPSLVAFIKKFKLRSKVKLTDLSTDYHVVQAWDSNSQAPP 174 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIASDIKTYHEL-----RINHGIV 154 T + ID R S A++L +A+ T L RI +G+ Sbjct: 175 TIAEKLSIDPRSPSIGYRGVLSAAEIL---------DVAAAASTVDGLEYTLHRITNGVA 225 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + DF ++ P + +D ++G+ KGCY+GQE+ +R H ++RKR Sbjct: 226 EGALDFPQASSLPLENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKR 274 >gi|330797296|ref|XP_003286697.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum] gi|325083295|gb|EGC36751.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum] Length = 412 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 50/250 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59 V L ++S IKV G A+ LQ + T ++ L + S+I L G++L +IS Sbjct: 15 VPLKSRSLIKVVGSDALKHLQGLTTNNLNRLKDSQSSNSSIYNGFLQSNGRLLFDSIISL 74 Query: 60 IEE------------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94 +E D+FI++ID + + + L YKLR+ + II++ Sbjct: 75 DKEHSIKQKAEFVISNGNGNGNGNGVVDSFIIDIDNAVLNDAVAHLKQYKLRNKIDIIDV 134 Query: 95 QPINGVVLSWNQEH-TFSNSSFI----DERFSIADVLLHRTWG---------------HN 134 V ++ + T N + DE S+ H+ G H Sbjct: 135 TDQYRVYSILDKTYKTVRNDELLSILEDEGCSVMSDPRHQIMGVRLLVPSNKSSSIENHL 194 Query: 135 EKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 K + D + YH R++ GI + ++ ++ P + DLLNG+ KGCY+GQE+ SR Sbjct: 195 AKYETMDEEIYHLFRLSQGIPEGRNEYQWGSVIPLEYNFDLLNGVDFHKGCYLGQELTSR 254 Query: 194 IQHRNIIRKR 203 Q +IRKR Sbjct: 255 TQFTGLIRKR 264 >gi|194383620|dbj|BAG64781.1| unnamed protein product [Homo sapiens] Length = 163 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 D+ YH+ R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H Sbjct: 21 GDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMG 80 Query: 199 IIRKRPMIITGTDDLPPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253 +IRKR + D LP S G+ +LT + +G G LA+ +K+ + Sbjct: 81 VIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHI 140 Query: 254 GMALTVHGVRVKASFPHWY 272 + V + AS P W+ Sbjct: 141 RASEGAQ-VALAASVPDWW 158 >gi|332812159|ref|XP_003308851.1| PREDICTED: putative transferase CAF17, mitochondrial isoform 1 [Pan troglodytes] gi|119590268|gb|EAW69862.1| chromosome 1 open reading frame 69 [Homo sapiens] Length = 163 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 D+ YH+ R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H Sbjct: 21 GDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMG 80 Query: 199 IIRKRPMIITGTDDLPPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253 +IRKR + D LP S G+ +LT + +G G LA+ +K+ + Sbjct: 81 VIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHI 140 Query: 254 GMALTVHGVRVKASFPHWY 272 + V + AS P W+ Sbjct: 141 RASEGAQ-VALAASVPDWW 158 >gi|261189571|ref|XP_002621196.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081] gi|239591432|gb|EEQ74013.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081] gi|239613037|gb|EEQ90024.1| aminomethyl transferase [Ajellomyces dermatitidis ER-3] gi|327356927|gb|EGE85784.1| aminomethyl transferase [Ajellomyces dermatitidis ATCC 18188] Length = 437 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 63/300 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS----AILTPQGKILLYFLISKIE 61 L ++ I + GK + FLQ ++T ++LT S A L G++L I + Sbjct: 50 LPTRALITLTGKDSTSFLQGLVTQNLLTPQNTPVPQSGFYAAFLNAPGRVLHDVFIYPVP 109 Query: 62 ED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE--- 107 + +++E+D+++ +L+ + +KLR+ + V WN+E Sbjct: 110 PNDSYNGTSDLAYLIEVDKNEVTNLMKHMRKHKLRAKLAFRAMDEGELNVFSLWNEEDAG 169 Query: 108 ---HTFSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHELR 148 + F + F+ D R G EK+ + D TY+ R Sbjct: 170 IMEYDFQLENGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLRR 226 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 I HG+ + + + + P + MD++ I KGCY GQE+ R HR ++RKR P+ Sbjct: 227 ILHGVPEGQGEIIRESALPMECNMDIMGAIDFHKGCYTGQELTIRTHHRGVVRKRILPVQ 286 Query: 207 ITGTDD-----------------LPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245 + D+ LPP+GS I G VG LA+ R++ Sbjct: 287 LYDMDEPIPETDVPNYSSESKLVLPPAGSNIAKVSSRKGRSAGKFLSGVGNIGLALCRLE 346 >gi|291614445|ref|YP_003524602.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1] gi|291584557|gb|ADE12215.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1] Length = 350 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 41/269 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I+V G+ A FLQ ++++DV + A+ S+ T +G++L FLI + D F Sbjct: 43 LSQFGTIRVHGEEAQNFLQNLLSSDVNAVTPAAAQFSSFNTAKGRVLATFLIWRGGNDHF 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------------------IQPINGVVL 102 L++ R + KL Y LR+ +E + P VV+ Sbjct: 103 -LQLPRELVAPIQKKLSMYVLRTKAKVENAGDAFVSLGLSGPNANALVKELVGPPPEVVM 161 Query: 103 SW-------NQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149 + Q+ F+ ++RF I A L + G + S + +R Sbjct: 162 AVASTAHFDTQQSHFTVIRLGEQRFQINVAPGHAADLWKKLSGAARPVGSPCWDWLNIRA 221 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-T 208 ++ P T P +DL+ ++ KGCY GQE+V+R+Q+ ++R + Sbjct: 222 GIPVILPQTQ---EAFVPQMTNLDLIGAVNFKKGCYPGQEIVARMQYLGKNKRRMYLAHV 278 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +D LP G + + ++E G VV + Sbjct: 279 FSDALPQPGDELFSTEMEGQACGTVVNAQ 307 >gi|115387399|ref|XP_001211205.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195289|gb|EAU36989.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1258 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 45/241 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55 L+++ I V G + FLQ +IT ++L P + R GS A L G+IL LY Sbjct: 868 LTHRGLISVTGVDSTSFLQGLITQNMLVTNDPNRSTRRTGSYTAFLNSHGRILNDAFLYP 927 Query: 56 LIS-KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTF 110 L S E ++++EID+++ +L+ L +KLR+ ++++ ++ + +W Sbjct: 928 LPSADAGESSWLIEIDKNEVPALMKHLKKHKLRAK--LKLRALDDGERTIWAAWKDHMEP 985 Query: 111 SNSSFIDER----FS----IADVLLHRTWGHNEKI----ASDIKT--------------- 143 +++ E FS IA + R G ++ A D++T Sbjct: 986 RWAAYNLEAAAGPFSAAPEIAGCIDTRAPGFGSRLVTPGAEDLRTHLGENEVAGDEVELG 1045 Query: 144 -YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 Y R+ HGI + ++ + + P ++ MD+++GI KGCY+GQE+ R H ++RK Sbjct: 1046 GYTVRRMMHGIAEGQSEIIRESALPLESNMDMMHGIDFRKGCYVGQELTIRTHHTGVVRK 1105 Query: 203 R 203 R Sbjct: 1106 R 1106 >gi|296082848|emb|CBI22149.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR Sbjct: 213 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 272 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGKKALAIAR--------IDKVD 248 +IRKR + + DD SG + + G+ + V GKKA + + +++ Sbjct: 273 VIRKRLLPLKFLDD---SGKE-MEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLN 328 Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272 A+K LT+ G V+V+A P W+ Sbjct: 329 EALKGPSKLTIQGQEDVKVEAIRPEWW 355 >gi|225470311|ref|XP_002267571.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 407 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR Sbjct: 250 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 309 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGKKALAIAR--------IDKVD 248 +IRKR + + DD SG + + G+ + V GKKA + + +++ Sbjct: 310 VIRKRLLPLKFLDD---SGKE-MEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLN 365 Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272 A+K LT+ G V+V+A P W+ Sbjct: 366 EALKGPSKLTIQGQEDVKVEAIRPEWW 392 >gi|241762172|ref|ZP_04760255.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373422|gb|EER63022.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 274 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 3/209 (1%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L Sbjct: 38 FLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDFILWA-EGSSILIDCESAIADNLIRRL 96 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 Y+LR + IEI P V S + SSF D R S + ++ A I Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLKPPENQAISSFSDPRLSELGFRWLQPATDSQPSAEAI 156 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R +I L I D+++ + Sbjct: 215 RRLAVIKTDHPLDDDKCRIYYSDLKLAVM 243 >gi|194365311|ref|YP_002027921.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3] gi|194348115|gb|ACF51238.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3] Length = 291 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 19/269 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + G A F A + DV LP + SA L+ +G+ L F + ++ ED Sbjct: 15 LPGHQLLSLQGPDAAVFAHAQFSGDVTALPLLHWQWSAWLSAKGRTLTVFQLLRLAEDHV 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF 120 +L + D++ +L + R V + ++ V ++ S ++ Sbjct: 75 MLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAQTTGDGWEL 134 Query: 121 SIADVLLHRTW--GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIF-PHD 169 + L RT G E A+ + + + + HG+ P + ++ P Sbjct: 135 DLGSDALPRTLRIGATEAFAAGSEADEATFALAWRQADLRHGL--PRLEESQREVWTPQQ 192 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 +D LNG S+ KGCY GQE+V+R H KR + + T +G + D +GT Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAAPAQAGDGVQQDGTALGT 251 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALT 258 + V G ALA+ ++ D ++ G A+ Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGDAVA 280 >gi|325982020|ref|YP_004294422.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212] gi|325531539|gb|ADZ26260.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212] Length = 342 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 41/301 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ I+ G A FLQ+ ++ D+ + +IA+ T +G+IL FL+ + + + Sbjct: 43 LSHRGLIQFSGDDAKNFLQSQLSCDIREISSEIAQYGGYCTSKGRILASFLLWQ-KNQSV 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI----------IEIQPINGVVLSWNQEHTFSNSS- 114 I+++ S S I +L Y LRS V I + N VL+ + +NS Sbjct: 102 IMQLPASLVASTIKRLSLYILRSKVQLTDISNACIRIGVAGPNVSVLTAEFCKSANNSDP 161 Query: 115 FIDERFSIADVLLHR------------TWGHNEKIASDIKT--YHELRINHGI--VDPNT 158 ID+ S+ V +R W ++ A+ + T + L I GI + P T Sbjct: 162 VIDKEISMLHVANNRMEVITSLENAPAVWERLKQNANPVGTACWDWLDIQSGIPIILPET 221 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSG 217 T P +D + G+S KGCY GQE+V+R Q+ +++R ++ T + +G Sbjct: 222 Q---ETFLPQMINLDAIGGVSFKKGCYPGQEIVARTQYLGKLKRRMFLVHLTTTETIKAG 278 Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 + + D+ + G +V G ALA+ + V+ +L +++K S P Sbjct: 279 DALYSADVVDQSCGNIVNIAPSPCGGYDALAVIQQSSVNTCNIHWQSLQGPTLKIK-SLP 337 Query: 270 H 270 + Sbjct: 338 Y 338 >gi|68171279|ref|ZP_00544680.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia chaffeensis str. Sapulpa] gi|88657580|ref|YP_506966.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999294|gb|EAM85942.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia chaffeensis str. Sapulpa] gi|88599037|gb|ABD44506.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 278 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 26/277 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++S I G+ L T +VL L A S +L+P G+ + F I + + Sbjct: 7 LPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGK-YV 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQE------HTFSNSS---F 115 +L+ ++++ +I K L YKL+ ++I+ + V V +Q +T+ F Sbjct: 66 LLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTIFF 125 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK-------TYHELRINHGIVDPNTDFLPSTIFPH 168 D R S + L + ++K+ S+I+ Y LRIN+ + D D + T FP Sbjct: 126 QDPRLS--KLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 M + I KGCYIGQE V+R+ + + II+ + ++ EIG Sbjct: 184 QFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSF--CDTKVMCAQQEIG 241 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 L VG L + I +H L + G +VK Sbjct: 242 RLLSNVGNIGLCLLDISS-EHDF---CNLKIGGAKVK 274 >gi|91776256|ref|YP_546012.1| glycine cleavage T protein (aminomethyl transferase) [Methylobacillus flagellatus KT] gi|91710243|gb|ABE50171.1| glycine cleavage T protein (aminomethyl transferase) [Methylobacillus flagellatus KT] Length = 334 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 46/283 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G+ A+ FLQ +T DV L I+ S +P+G++L FL + ++ Sbjct: 36 LSHYGLLSLEGEDAVTFLQGQVTNDVKKLDGNISHYSGYCSPKGRLLALFL-AFAQDGRL 94 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSF--IDE--- 118 L+ DR + + +L Y LRS V+I + + V ++ N N+ F I E Sbjct: 95 YLQFDRGLLEPIAKRLRMYVLRSKVVIADRSDDTVRIGIAGNAAEAALNTRFSHIPETEY 154 Query: 119 -RFSIADVLLHRTWG---------------------HNEKIASDIKTYHELRINHGIVD- 155 + S +++ R G + +D + I GI + Sbjct: 155 AQVSQDGIIIIRLPGTLPRYELLSPAAQAAELWTALREHLVPADKADWDWREIQAGIPEI 214 Query: 156 ---PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTD 211 F+P + +DLLNGIS KGCY GQE+V+R + +++R + D Sbjct: 215 VGATQEAFVPQMVN-----LDLLNGISFKKGCYTGQEIVARTHYLGKVKRRTHLAHIAVD 269 Query: 212 DLPPSGSPIL-TDDIEIGTL-----GVVVGKKALAIARIDKVD 248 P +G I+ D I G + G+ LA R++ V+ Sbjct: 270 AAPAAGEEIVDADGIAAGQIVRSAPNPTGGQDVLAELRLESVE 312 >gi|163856818|ref|YP_001631116.1| hypothetical protein Bpet2506 [Bordetella petrii DSM 12804] gi|163260546|emb|CAP42848.1| conserved hypothetical protein [Bordetella petrii] Length = 377 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 41/256 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---E 62 L + + + G A+ FL +T DV LP AR S T +G++L ++ + + E Sbjct: 64 LPDYAVVAASGADALTFLHGQLTQDVAGLPADAARLSGYCTAKGRLLATLVLWRAQTMPE 123 Query: 63 DTFILEIDR----SKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-----HTF 110 + E R ++RD +L+ +L + LR+ V + + P+ + + E + Sbjct: 124 ASDAAEAARVYALTRRDLADALVKRLSMFVLRAKVKLAVAPLQAAGVWCSPEGLASLQSA 183 Query: 111 SNSSFIDERFSIADVLLH------------RTWGHNEKIASDIKTYHELRINHGIVD--- 155 + + + A++ R W + ++ G D Sbjct: 184 AGGALPTAAWQRAELATGTWIAAPSARGALRWWWIASEAQLQQAGALAAQLARGTPDQWR 243 Query: 156 --------PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 P +F P +DLL+G+S TKGCY GQEVV+R +R +++R Sbjct: 244 GDDLAAGLPWVAAATQDLFIPQTLNLDLLDGVSFTKGCYPGQEVVARSHYRGTVKRRAAY 303 Query: 207 --ITGTDDLPPSGSPI 220 + G D PP G+ I Sbjct: 304 GRLDGQADPPPPGTDI 319 >gi|115313839|gb|AAI24382.1| Zgc:153540 [Danio rerio] Length = 262 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 33/258 (12%) Query: 44 ILTPQGK----ILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L QG+ I+LY L + + +LE D + +DS++ L YK+R V + + P Sbjct: 5 VLNVQGRTLYDIILYSLKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSL 64 Query: 99 GV--VLSWNQEH-------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------- 141 + +L ++E T ++ + E+ +++ R + DI Sbjct: 65 SLWALLPHSKEAVLGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACQQGN 124 Query: 142 -KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H +I Sbjct: 125 TEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVI 184 Query: 201 RKR--PMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 RKR P+ ++ + GS + T+ + G V K L++ R+ HA K+ + L Sbjct: 185 RKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQL 240 Query: 258 TVHG---VRVKASFPHWY 272 G V V+AS P W+ Sbjct: 241 KSSGDETVTVQASVPDWW 258 >gi|310791527|gb|EFQ27054.1| folate-binding protein YgfZ [Glomerella graminicola M1.001] Length = 404 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 43/248 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------SAILTPQGKIL----LYF 55 L ++ I V G A FLQ +IT D+ + K AR +A L G++L +Y Sbjct: 54 LPSRRLISVAGPDAAKFLQGVITRDIAS---KEARARQTGFYAAFLNATGRVLHDVFIYP 110 Query: 56 LISKIEEDT----------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--S 103 ++ + D F++E+D ++ + L + YKLR+ + + + + + + Sbjct: 111 DLAGLGGDVAAESEQAGTRFLVEVDANEAERLAKHIKRYKLRAKLNVRLLATDEATVWHA 170 Query: 104 WNQ-------EHTFSNSSFIDERF-SIADVLLHRTWGHNEKIASDIK-----TYHELRIN 150 W+ + ++ D R + L+H G + D+ +Y R Sbjct: 171 WDDGGKPMTTDAALLSTVTRDPRTPELGYRLVH---GRDTPPPLDLDATTEDSYTIRRYM 227 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208 G+ + + + P + MD +NGI KGCY+GQE+ R +HR ++RKR P +I Sbjct: 228 QGVAEGQDEIIREHALPQETNMDYMNGIDYHKGCYVGQELTIRTKHRGVVRKRILPCMIY 287 Query: 209 GTDDLPPS 216 D P Sbjct: 288 DVDRATPQ 295 >gi|4586118|emb|CAB40954.1| putative protein [Arabidopsis thaliana] gi|7267914|emb|CAB78256.1| putative protein [Arabidopsis thaliana] Length = 363 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/305 (23%), Positives = 119/305 (39%), Gaps = 62/305 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV---------------------LTLPYKIARGSAI 44 L ++S ++ G + FLQ ++T DV +T P A A+ Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA---AL 91 Query: 45 LTPQGKILL-YFLISKIEEDT--------------------FILEIDRSKRDSLIDKLLF 83 LTPQG+ L +FL S D ++D D L++ L Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y+LRS V +I+ + W + S D E +D Sbjct: 152 YRLRSKV--DIENVAEEFSCWQRYGRNLTGSSSVGWGGGVDRAAPLVEADKE---TDESN 206 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y R+ HG+ + + + P + LN IS KGCY+GQE+++R HR +IRKR Sbjct: 207 YLLWRLEHGVAEGSAEIPKGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKR 266 Query: 204 --PMIITGTDDLP-----PSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKG 254 P+ ++ +G+ ++ ++GT+ +G + + + R V+ A K Sbjct: 267 LIPLRFIDSNGKELNQKIAAGAEVVESGTGKKMGTVSTALGSRGMGVMR---VEEAFKPS 323 Query: 255 MALTV 259 L V Sbjct: 324 AELAV 328 >gi|225708392|gb|ACO10042.1| Hypothetical protein C21E11.07 in chromosome I [Osmerus mordax] Length = 364 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 57/309 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +++ + + G+ +LQ I+T D+ L P A + +L QG+ L ++ ++++ Sbjct: 64 LKHRTLLNIQGQDTRAYLQGIVTNDMELLKEPDHRAMYAHMLNVQGRTLFDIIMYRLKDA 123 Query: 64 ----TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------------I 94 + +LE D + +DS++ L YKLR V I+ Sbjct: 124 EVGCSLLLECDSTVKDSILKHLKLYKLRRKVNIKPCPELTVWAVLPRDKVAGCQEIPNIT 183 Query: 95 QPINGVVLSWNQEHTFSNSSFI-DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 P ++ + + + D + + D++L G +E+ YH+ R G+ Sbjct: 184 PPEQALICEADPRNAEMGWRLVADSKVNPLDLILSCQLGDSEE-------YHKHRYAIGL 236 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII------ 207 + D P ++ + + GIS +KGCYIGQE+ +R H ++RK M + Sbjct: 237 PEGVKDLPLGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKPLMPVRLSAPA 296 Query: 208 ----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 G SG P IG LG+ + + LA A+ + + + + A+T+ G Sbjct: 297 EGLEEGAQLQTQSGKPAGKHRAGIGQLGLSLIR--LAHAK-EPLTFKLFEDTAVTLEG-- 351 Query: 264 VKASFPHWY 272 S P W+ Sbjct: 352 ---SVPDWW 357 >gi|242022699|ref|XP_002431776.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517101|gb|EEB19038.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 328 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 35/301 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIE-ED 63 L+ +S +++ GK A +LQ +IT D+ L + + L +G++L +I E+ Sbjct: 17 LNERSLLRLSGKDANLYLQGLITNDMKHLESGASSMYTMFLNSKGRVLYDSIIYNTNIEN 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSFI 116 TF +E D + L D L+ +K+R V I++ V + N + ++ + Sbjct: 77 TFYVECDSNASLYLKDHLMHFKVRRKVNIDLLSDEFSVWALAFKDYIINPKDVYNYKPVL 136 Query: 117 DE--------------RFSIADVLLHRTWGHN-----EKIA----SDIKTYHELRINHGI 153 +E R + + +N +KIA + Y LR N GI Sbjct: 137 NELKKNLPQLIITNDPRLPSMGLRVLTPKDYNLVNEIKKIADVNVQEENFYKFLRYNLGI 196 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 + + FP + D L+GIS KGCY+GQE+ +R H +IRKR M + ++ Sbjct: 197 GEGLNELPLEKCFPMEINGDYLHGISFHKGCYVGQELTARTYHTGVIRKRIMPLKFNEEV 256 Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + G PI + +G + G + + + +++ A+K +T + P W Sbjct: 257 SITQPGIPIFSVSQLTKAIGKLFGVEQTSGLGLLRIEEALKANELITFEK-KCNTHRPFW 315 Query: 272 Y 272 + Sbjct: 316 W 316 >gi|79470337|ref|NP_192950.2| aminomethyltransferase [Arabidopsis thaliana] gi|22655070|gb|AAM98126.1| putative protein [Arabidopsis thaliana] gi|30725630|gb|AAP37837.1| At4g12130 [Arabidopsis thaliana] gi|332657699|gb|AEE83099.1| glycine cleavage T-protein family protein [Arabidopsis thaliana] Length = 393 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 93/352 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV---------------------LTLPYKIARGSAI 44 L ++S ++ G + FLQ ++T DV +T P A A+ Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA---AL 91 Query: 45 LTPQGKILL-YFLISKIEEDT--------------------FILEIDRSKRDSLIDKLLF 83 LTPQG+ L +FL S D ++D D L++ L Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151 Query: 84 YKLRSNVIIEIQPINGVVLSWNQ---------------------EHTFSNSSFIDERFSI 122 Y+LRS V +I+ + W + E T S + + + + Sbjct: 152 YRLRSKV--DIENVAEEFSCWQRYGRNLTGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209 Query: 123 A--DVLLHRTWGHNEKI--------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 + L +R+ ++ +D Y R+ HG+ + + + P + Sbjct: 210 PRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PSGSPILTDDI 225 LN IS KGCY+GQE+++R HR +IRKR P+ ++ +G+ ++ Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKIAAGAEVVESGT 329 Query: 226 --EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272 ++GT+ +G + + + R V+ A K L V V+V+A P W+ Sbjct: 330 GKKMGTVSTALGSRGMGVMR---VEEAFKPSAELAVKDSEEVKVEAIKPTWW 378 >gi|303314493|ref|XP_003067255.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106923|gb|EER25110.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1262 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 41/264 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58 V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+ Sbjct: 881 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 940 Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107 + E+ +++E+D+ + +L+ L +KLR+ + + GV W+ Sbjct: 941 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 1000 Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149 + D E + AD +G+ +A D + TY RI Sbjct: 1001 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRI 1059 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ + Sbjct: 1060 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 1119 Query: 208 TGTDDLPPSGS----PILTDDIEI 227 T+D P S P+ + D ++ Sbjct: 1120 YNTEDPKPMPSSLRIPVYSPDSQL 1143 >gi|170058333|ref|XP_001864877.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877457|gb|EDS40840.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 349 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 29/210 (13%) Query: 44 ILTPQGKILLYFLISKI---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100 +L G++L +I ++ + D F++E D D+L L +++R V EI P Sbjct: 15 LLNTAGRVLFDTMIYRMSPEQSDHFLVECDAGLVDALRKHLTMFRIRKKV--EIAPAECS 72 Query: 101 VLS-WNQEHTFSNSSFIDERFSI-ADVLLHR------------------TWGHNEKIASD 140 V + ++QE+ E SI D L + H A Sbjct: 73 VWAVFSQENGSLPEQASREGVSIYKDTRLAELGYRIITDKTVSLDTVKAAFPHGTAYAEG 132 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 +Y E R + GI + +F FP ++ D ++G+S KGCYIGQE+ +R H ++ Sbjct: 133 -GSYLEHRFSLGIGEGVNNFPQGKCFPLESNCDYMHGVSFHKGCYIGQELTARTHHTGVV 191 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 RKR M +T + +P + P DD EI ++ Sbjct: 192 RKRLMPLTFENPVPNNELP---DDAEIKSV 218 >gi|115715690|ref|XP_001188789.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 269 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 L+ +S + V G+ A LQ ++T DV L + S L QG++L + + Sbjct: 3 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSN 62 Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEH 108 D +++LE D + L L Y++R V +I ++ W+ Sbjct: 63 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWSIFSPGPTPPPS 120 Query: 109 TFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFL 161 SN S F D + + + G ++ + Y R G+ + + Sbjct: 121 PGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELP 180 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLP--PSGS 218 P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I + +P P+G+ Sbjct: 181 PGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGT 240 Query: 219 PILT-DDIEIGTLGVVVGKKALAIAR 243 I T + +G + LA+ R Sbjct: 241 SIKTAEGKNVGKFRCHLHHNGLALLR 266 >gi|255537315|ref|XP_002509724.1| aminomethyltransferase, putative [Ricinus communis] gi|223549623|gb|EEF51111.1| aminomethyltransferase, putative [Ricinus communis] Length = 252 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 17/147 (11%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 ++ K Y RI +G+ + +T+ P + + LN IS KGCY+GQE+V+R HR Sbjct: 101 TNEKNYQLWRIENGVAEGSTEIPKGEAIPLEYNLASLNAISFDKGCYVGQELVARTHHRG 160 Query: 199 IIRKRPMIITGTDD--------LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVD 248 +IRKR +++ DD + P GS ++ T ++G + +G + L + R+++ Sbjct: 161 VIRKRLLLLMFLDDSGTEVEEKVAP-GSEVIDTTSSKKVGFVTAALGCRGLGVLRLEE-- 217 Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272 A K +L + G ++V+ P W+ Sbjct: 218 -AWKWLGSLIIEGQDDLKVETIRPKWW 243 >gi|115955869|ref|XP_001192913.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 291 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 L+ +S + V G+ A LQ ++T DV L + S L QG++L + + Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSN 84 Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEH 108 D +++LE D + L L Y++R V +I ++ W+ Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWSIFSPGPTPPPS 142 Query: 109 TFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFL 161 SN S F D + + + G ++ + Y R G+ + + Sbjct: 143 PGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELP 202 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLP--PSGS 218 P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I + +P P+G+ Sbjct: 203 PGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGT 262 Query: 219 PILT-DDIEIGTLGVVVGKKALAIAR 243 I T + +G + LA+ R Sbjct: 263 SIKTAEGKNVGKFRCHLHHNGLALLR 288 >gi|78485072|ref|YP_390997.1| glycine cleavage T protein (aminomethyl transferase) [Thiomicrospira crunogena XCL-2] gi|78363358|gb|ABB41323.1| glycine cleavage system T protein homolog [Thiomicrospira crunogena XCL-2] Length = 354 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 52/264 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++Q+ IKV G+ A FLQ +T D+ + + A+ SA PQGK+L + K +D Sbjct: 44 LAHQALIKVTGEEAFDFLQGQLTNDLKDVSEQQAQLSAYCEPQGKVLAIMTVFK-HQDAL 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV---------------------------------II 92 L D S + +++ +L +K+RS V I Sbjct: 103 YLSFDGSLKQTILQRLTMFKMRSKVELEDVSEQMIQVGYAGDFADLDVQRLLSTKIKNIY 162 Query: 93 EIQPINGVVLS-------WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 E++ + LS H +S +++ S+ D L N ++ + ++ Sbjct: 163 EVEQVQDEALSDIIAIKLPGPYHCYSFFGPVEQAKSLWDTL------KNNGEFTNTQDWN 216 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + I G P + S F L +D LN I+ KGC+ GQEV++R+ +R KR Sbjct: 217 LIHIVSG--QPQVNDTTSNEFIAQFLNLDKLNAINFKKGCFPGQEVIARMFYRGKATKRM 274 Query: 205 MIITGTDDLP--PSGSPILTDDIE 226 M + + LP P + L D+ E Sbjct: 275 MRLHLEEVLPLEPGETFKLMDEAE 298 >gi|149186024|ref|ZP_01864339.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21] gi|148830585|gb|EDL49021.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21] Length = 244 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 21/214 (9%) Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYF 55 M++ L++++ +++ +S FLQ ++T+DV LP + +LTPQGK L Sbjct: 1 MTATRLTSRAIVRLTPADDSESIADFLQGLLTSDVKQALPVY----AGLLTPQGKALFDM 56 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ +D +L+ + + L +L Y+LR + I + GV W + HT + Sbjct: 57 IVWPAGDDGLLLDCEAEIAEELAKRLSLYRLRRKIDIAVDDTVGV--HW-EGHT-GDGGA 112 Query: 116 IDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 D R + L + W E S + Y R++ G+ + + +A+ Sbjct: 113 PDPRLAA----LGQRWLAPVAEDEGSADEAYRAHRLSLGVPEGRAELGDILWLETNAVE- 167 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L+G++ KGCYIGQE +R+ R+ I +R +++ Sbjct: 168 -LHGVAFDKGCYIGQENTARMNWRSKINRRLVVV 200 >gi|84999054|ref|XP_954248.1| long-chain-fatty-acid--coa ligase 5 [Theileria annulata] gi|65305246|emb|CAI73571.1| long-chain-fatty-acid--coa ligase 5, putative [Theileria annulata] Length = 1034 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 34/239 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+ K+CG+ + FLQ +I++D+ + + R + L+ QG I+ LI E D + Sbjct: 693 LNNRVVTKLCGQDSFNFLQGLISSDLRLVRAQETRPALFLSSQGHIVAESLIFTHEGDFY 752 Query: 66 I--LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSSF 115 + L+++ SK ++I+K KL S V + V + + E T N F Sbjct: 753 LDSLKVNHSKILNIINK---RKLASKVYTKTTESEVYVNTSESDFYSHFQTEKTKENKDF 809 Query: 116 ID----------ERF-----SIADVLLHRTWGHN--EKIASDIKTYH-ELRINHGIVD-- 155 I R+ +I D + T G + EK ++ Y L +N+ ++D Sbjct: 810 IKLLDTRNQFFGHRYYCISNNIVDGVDFNTLGKDNFEKNQENLSVYDIMLLMNNYVMDVM 869 Query: 156 -PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 F+ + P D + N +S KGCY+GQE+++RI ++ +I K + I +DD Sbjct: 870 MSKPGFVEYKLMPFDLNLQNFNYLSANKGCYVGQEIINRINNKVLINKYKLYIALSDDF 928 >gi|254448752|ref|ZP_05062209.1| glycine cleavage T protein [gamma proteobacterium HTCC5015] gi|198261593|gb|EDY85881.1| glycine cleavage T protein [gamma proteobacterium HTCC5015] Length = 333 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 42/261 (16%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + +KV G A FL +++DV L ++ S+ +P+G + + + K+ D +L Sbjct: 33 DDAILKVSGSDATEFLHGQLSSDVKNLQVGSSQLSSYSSPKGMVYSHCRLYKLSNDECLL 92 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------SNSSFID 117 + RS S+ +L + LR+ V I + GV+L E + + F Sbjct: 93 RLPRSLTVSVGKRLKMFVLRAQVEITVDESVGVLLLAGSEASALTPLCDDLPDTPDHFSQ 152 Query: 118 ERFSIADVL--LHRTWGH---------NEKIASDIKTYHELRINHGIVDPNT-DFL---- 161 SIA L + R G NE +++ KT L H DP+T D L Sbjct: 153 SEHSIALKLPDIQRENGSLPYYEVVLSNEHLSTAWKT---LTQTHLACDPSTADLLRILS 209 Query: 162 ------PST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 PST + + L GIS KGCY GQE +++ Q+R +R + +TG + Sbjct: 210 GEPHLSPSTTEQFVAQNLNLHLNGGISFKKGCYPGQEYIAKTQYRGRLRSQLFRLTGETE 269 Query: 213 LPPSGSPILTD---DIEIGTL 230 L P G+ + ++ + EIGT+ Sbjct: 270 LEP-GAALYSNPDSNTEIGTV 289 >gi|302417320|ref|XP_003006491.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261354093|gb|EEY16521.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 377 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 25/231 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--------SK 59 ++ I V G FLQ +ITA++ P + +A LT G+IL I + Sbjct: 46 SRRLISVSGPDTAKFLQGVITANI-NAPGPLY--AAFLTATGRILNDVFIYPDTLAIGAG 102 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQ-------EHTF 110 E +F++E D + L + YKLR+ + + + + WN + T Sbjct: 103 APETSFLIEADADQAPVLAKHIRRYKLRAKFDVRLLDDSDARVWHLWNDAAPDPPAQSTA 162 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 + D R L R + D + Y R G+ + + L P Sbjct: 163 AGDLMPDRRAPGMGYRLVRKGDAAPALDLEQVDEQAYTLRRYLRGVAEGQGEMLREHALP 222 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216 ++ +D + GI KGCY+GQE+ R +HR ++RKR P ++ D P+ Sbjct: 223 QESNLDYMGGIEYHKGCYVGQELTIRTKHRGVVRKRILPCVLYNEGDAMPT 273 >gi|313200647|ref|YP_004039305.1| folate-binding protein ygfz [Methylovorus sp. MP688] gi|312439963|gb|ADQ84069.1| folate-binding protein YgfZ [Methylovorus sp. MP688] Length = 344 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 45/274 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V G+ AI FLQ +T D+ L + + T +G++L FL + + Sbjct: 42 LSHLGLLQVDGEDAITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFL-AFAHQGHI 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLSW--NQEH 108 L+++ S + ++ +L Y LRS V+I+ + I G + + + H Sbjct: 101 HLQLNGSLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTEVH 160 Query: 109 TFS---NSSFID-----ERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 S N++ I RF I A L H + + + L I GI Sbjct: 161 GISTQENATLIRLPGALPRFEIFTSQENAQELWQELEQHFDPVGQ--TGWDWLEIEAGI- 217 Query: 155 DPNTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209 + P+T P +D L GI+ KGCY GQE+V+R + +++R +I +T Sbjct: 218 ---PEIFPATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTA 274 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 TD +P G + + E +G +V +A A Sbjct: 275 TDQIPAPGDEVFIGEGE--AVGQIVRSSGIAGAE 306 >gi|259489751|tpe|CBF90281.1| TPA: aminomethyl transferase, putative (AFU_orthologue; AFUA_5G12430) [Aspergillus nidulans FGSC A4] Length = 438 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 82/363 (22%), Positives = 142/363 (39%), Gaps = 96/363 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIAR--GS--AILTPQGKIL---LYFL 56 L+N+ I + G + FLQ ++T ++ P + R GS A L G+IL + Sbjct: 42 LTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAFIYP 101 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSS 114 +++ +E +++E+D+ + L+ L +KLR+ + + V SW ++ Sbjct: 102 LTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPRWAA 161 Query: 115 FIDERFSIADVLLH--------------------------RTWGHNEK---IAS-----D 140 + E S + H RT+ E IA+ D Sbjct: 162 YNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGEEVD 221 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR ++ Sbjct: 222 LDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHRGVV 281 Query: 201 RKRPMIITGTDD---------------------LPPSGSPILTDDIEIGT-----LGVVV 234 RKR + + +D LPP+GS I G LG + Sbjct: 282 RKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLGGI- 340 Query: 235 GKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASFPH 270 G LA+ R++ + D + G L V+VKA P Sbjct: 341 GNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIVPT 400 Query: 271 WYK 273 W + Sbjct: 401 WTR 403 >gi|77165932|ref|YP_344457.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus oceani ATCC 19707] gi|254434606|ref|ZP_05048114.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus oceani AFC27] gi|76884246|gb|ABA58927.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus oceani ATCC 19707] gi|207090939|gb|EDZ68210.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus oceani AFC27] Length = 347 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I + G+ A FLQ ++T DV + + ++ + + P+G++L F + + + F Sbjct: 43 LSHFGLIAISGEDASDFLQNLLTNDVKEVNSQRSQLTGLCNPKGRLLAIFRLFQWNAN-F 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------------------EIQPINGVV-LSWN 105 L + S ++++ +L Y LR+ V + E++ G ++ N Sbjct: 102 YLSLPHSLLEAVLKRLNMYVLRAQVSLADVSDHFCRFGLVGSQASDELKRYLGKAPMTTN 161 Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDI-KTYHEL---RINHGIV 154 + + + RF + + L + WG K + + + EL R + Sbjct: 162 EVQQAPDCCILRVPGEPSRFEVVGGMNTLQKFWGELTKTVTPVGANFWELTTIRAGVATI 221 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213 P T ++ P ++L G+S TKGCY GQEV++R+ +R +R + TD Sbjct: 222 YPETQ---ASFIPQQVNLELREGVSFTKGCYPGQEVIARMHYRGKPSRRMFLAHISTDQQ 278 Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK 237 P G P+ L +D G +V + Sbjct: 279 PQPGDPVYLANDEARQARGEIVAAQ 303 >gi|307211751|gb|EFN87746.1| Putative transferase C1orf69, mitochondrial [Harpegnathos saltator] Length = 304 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 17/142 (11%) Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 ASD Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H Sbjct: 159 ASD---YRAFRYKLGVGEGVQDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTARTYHT 215 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHA 250 ++RKR M +T + + P+ D+ + G VVG K L + RI++ A Sbjct: 216 GVVRKRLMPLTFEN---IADKPLSYDEKILDQSGNVVGKFRGYTEKHGLGLMRINESLSA 272 Query: 251 IKKGMALTVHGVRVKASFPHWY 272 L V GV VK + P W+ Sbjct: 273 ----QQLNVAGVNVKVTKPAWW 290 >gi|317035207|ref|XP_001401302.2| transferase caf17 [Aspergillus niger CBS 513.88] Length = 445 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 50/247 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55 L+N+ I + G + +LQ +IT ++L P + R GS A L QG++L LY Sbjct: 49 LTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAFLYP 108 Query: 56 LI----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109 L + +E +++E+D+S+ SL+ L +KLR+ + + + V SW ++H+ Sbjct: 109 LPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASW-KDHS 167 Query: 110 ---------------------FSNSSFIDERF----------SIADVLLHRTWGHNEKIA 138 + + +D R D+ H E Sbjct: 168 EPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEGYG 227 Query: 139 S--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R H Sbjct: 228 SEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRTHH 287 Query: 197 RNIIRKR 203 ++RKR Sbjct: 288 TGVVRKR 294 >gi|294011519|ref|YP_003544979.1| aminomethyltransferase [Sphingobium japonicum UT26S] gi|292674849|dbj|BAI96367.1| aminomethyltransferase [Sphingobium japonicum UT26S] Length = 245 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 10/203 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++ Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKEGEPRWTALLTPQGKALFDFILWAD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D I + + ++ D+L +L Y+LR V I + + + W E + D R Sbjct: 61 GGDVLI-DCEGAQADALARRLALYRLRRKVA--ITRADELAVHWALE---APGKPFDPRL 114 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L HR W + R++ GI + + I +A L G+ Sbjct: 115 P---QLGHR-WIAPADEGDASAAFRAHRLSLGIFEGVGELGQDQILWLEANAGELGGVDY 170 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203 KGCY+GQE +R+ +RN + +R Sbjct: 171 DKGCYVGQENTARMHYRNKVNRR 193 >gi|292490833|ref|YP_003526272.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4] gi|291579428|gb|ADE13885.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4] Length = 345 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 37/265 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I + G+ A LQ ++T D+ + + ++ + + P+G++L + + + + F Sbjct: 41 LSHLGLIALTGEDASTLLQNVLTNDIGEVNAQRSQLTGLCNPKGRLLAILRLFQWDTN-F 99 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP------INGVVLSWNQEHTFSNS-SFID 117 L + S ++++ KL Y LR+ V +I+ + G+ S H + + ++ Sbjct: 100 YLSLPHSLLEAVLKKLNMYVLRAQVSLIDASEQYCCLGLAGLQASDELRHCLGKAPTAVN 159 Query: 118 E-----------------RFSIADVL--LHRTWGHNEKIASDIKTYH----ELRINHGIV 154 E RF + L + W K A + T+ +R + Sbjct: 160 EVYQTSSCCVLRVPGDPPRFEVVGEFDALQKLWSKLSKTAVPVGTHFWELATIRAGIATI 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDL 213 P T + P ++L G+S TKGCY GQEVV+R+ +R +R + TD Sbjct: 220 YPETQ---ESFIPQQVNLELTEGVSFTKGCYPGQEVVARMHYRGKPSRRMFLAHMITDKR 276 Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK 237 P G P+ L D E T+G +V + Sbjct: 277 PQPGDPVYLADGKEGQTVGEIVAAQ 301 >gi|158512851|sp|A2R472|CAF17_ASPNC RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|134081987|emb|CAK46672.1| unnamed protein product [Aspergillus niger] Length = 444 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 50/247 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55 L+N+ I + G + +LQ +IT ++L P + R GS A L QG++L LY Sbjct: 48 LTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAFLYP 107 Query: 56 LI----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109 L + +E +++E+D+S+ SL+ L +KLR+ + + + V SW ++H+ Sbjct: 108 LPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASW-KDHS 166 Query: 110 ---------------------FSNSSFIDERF----------SIADVLLHRTWGHNEKIA 138 + + +D R D+ H E Sbjct: 167 EPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEGYG 226 Query: 139 S--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R H Sbjct: 227 SEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRTHH 286 Query: 197 RNIIRKR 203 ++RKR Sbjct: 287 TGVVRKR 293 >gi|255537081|ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus communis] gi|223549506|gb|EEF50994.1| aminomethyltransferase, putative [Ricinus communis] Length = 258 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 15/146 (10%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 ++ K Y RI +G+ + + + P + + LN IS KGCY+GQE+V+R HR Sbjct: 101 TNEKNYQLWRIENGVAEGSIEIPKGEAIPLEYNLACLNAISFDKGCYVGQELVARTHHRG 160 Query: 199 IIRKR--PMII-----TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDH 249 +IRKR P++ T ++ GS ++ T ++G + +G + L + R+++ Sbjct: 161 VIRKRLLPLMFLDDSGTEVEEKVAPGSEVIDTTSCKKVGFVTAALGCRGLGVLRLEE--- 217 Query: 250 AIKKGMALTVHG---VRVKASFPHWY 272 A K +L + G ++V+ P W+ Sbjct: 218 AWKGSGSLIIEGQDDLKVETIRPKWW 243 >gi|23012287|ref|ZP_00052410.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 114 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTL 230 MD L G+ KGCY+GQEVVSR+QHR R R + + D P G+ + +GT Sbjct: 1 MDQLGGVDFKKGCYVGQEVVSRMQHRGTARTRILPLVYRDGPAPEPGTEVTAGARSLGTT 60 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 G G LA R+D++ A+ G + G Sbjct: 61 GSAAGDWGLATIRLDRLGDALAAGEPVRAGG 91 >gi|158512691|sp|A1DDV0|CAF17_NEOFI RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor Length = 447 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 50/265 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLI-- 57 L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLVANDPSRATRRTGTYTAFLNSQGRVLNDAFIYP 107 Query: 58 --------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108 + ++ +++E+D+++ SL+ L +KLRS + + ++ V S ++H Sbjct: 108 MPKGDGETATTDDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167 Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139 + + + S+A + R G ++ + Sbjct: 168 SEPRWAAYNLESESSSPFSPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGS 227 Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H Sbjct: 228 EVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHT 287 Query: 198 NIIRKR--PMIITGTDDLPPSGSPI 220 ++RKR P+ + LP +P+ Sbjct: 288 GVVRKRIVPVQLYAKSPLPSGETPV 312 >gi|33151540|ref|NP_872893.1| hypothetical protein HD0303 [Haemophilus ducreyi 35000HP] gi|33147760|gb|AAP95282.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 295 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 22/235 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V LS+ I + G A +LQ +T DVL K+A G LT P+GKI F I Sbjct: 16 CVELSDYRLIGIAGVDAASYLQGQLTCDVL----KLAIGEHTLTCHCDPKGKISALFRIY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFI 116 + E F + I + +L Y + S V P+ GV NS+ + Sbjct: 72 RAAEQQFFMIIHNDLLAEALVQLKKYAVFSKVTFTPLTTPLYGVTGHEQLAKISENSTAL 131 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDALM 172 + ++ WG + D + + I GI + N +F+P + H Sbjct: 132 LLNQAQKRAII---WGEDLVTNGDCSLWDLMDIQDGIPILLKANQFEFIPQAVNLHA--- 185 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + N IS TKGCY+GQE V+R ++R + ++ + G D P + + IEI Sbjct: 186 -IENAISFTKGCYMGQETVARAKYRGVNKRAMFTLVGVFD-GQVALPQIAESIEI 238 >gi|256371884|ref|YP_003109708.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331] gi|256008468|gb|ACU54035.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331] Length = 274 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 33/196 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G+ A +LQ ++ DV TL +G S +L G ++ + + ++ +D F L + Sbjct: 29 VQVTGRDAARYLQGQLSQDVSTLKAD-GQGAISVLLGVDGHLVTWLRVRRLADDAFWLVV 87 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + + + +L +++R+ IE ++P G+ W + ++ F+D Sbjct: 88 AEAHGERVRQRLEHFRIRTQATIELLPGHLHVRPPEGLEPLWPLDQ---DAPFVDA---- 140 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 +D+ +H R+ G DP +D + + H + +S TK Sbjct: 141 ---------------PADLARFHAERLVAGAFDPASDLV-DGLLAHGVPTLVERAVSFTK 184 Query: 183 GCYIGQEVVSRIQHRN 198 GCY GQE+V+R R Sbjct: 185 GCYTGQELVARTSSRG 200 >gi|115959466|ref|XP_001183295.1| PREDICTED: similar to GA20785-PA [Strongylocentrotus purpuratus] Length = 277 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 33/233 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 L+ +S + V G+ A LQ ++T DV L + S L QG++L + + + Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSK 84 Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 D +++LE D + L L Y++R V +I ++ W+ FS Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWS---IFSPGPTP 139 Query: 117 DERFSIADVLLH-----RTWGHNEKI----ASDIKTYHEL--------RINHGIVDPNTD 159 H R G +++ S + E+ R G+ + + Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT 210 P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR P+ + GT Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGT 252 >gi|85373394|ref|YP_457456.1| aminomethyltransferase [Erythrobacter litoralis HTCC2594] gi|84786477|gb|ABC62659.1| predicted aminomethyltransferase [Erythrobacter litoralis HTCC2594] Length = 246 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 22 FLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80 FLQ ++T DV TLP + +LTPQGK L F++ + +++ + D + Sbjct: 30 FLQGLVTNDVKGTLPAY----AGLLTPQGKALFDFIVWPSGKGELLVDCEADLADEFAKR 85 Query: 81 LLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140 L Y+LR IEI + V + W Q H + + D R +AD+ ++ S Sbjct: 86 LSLYRLRRK--IEIARDDSVAVHW-QPH-IGDGAANDPR--LADLGQRWLAPVSDADESA 139 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + + R++ G+ + + +A+ LNG+S KGCY+GQE +R+ R I Sbjct: 140 DEAWRKHRLSLGVPEGRAEMGDILWLETNAVE--LNGVSFGKGCYVGQENTARMNWRQKI 197 Query: 201 RKRPMII 207 +R +++ Sbjct: 198 NRRLVVV 204 >gi|254490944|ref|ZP_05104126.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxidans DMS010] gi|224463853|gb|EEF80120.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxydans DMS010] Length = 315 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 35/256 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ S I V G A FLQ ++T V L A+ + + +P+G++L F + K E+D Sbjct: 25 LADLSIIIVSGDDAGSFLQNLLTNAVNALKPHQAQLNGLCSPKGRLLAIFQLIKREQDYL 84 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 I+ + +++ +L +KLRS V I + V N ++ ++ + S ++ Sbjct: 85 IV-LPAELAEAIAQRLSMFKLRSKVDIALSDSLAAVGIINPDNKMTDLPSTTMQGSETEL 143 Query: 126 -LLHRTWGHNEK---IASDIKT------------------YHELRINHGIV----DPNTD 159 LL + G + + I KT + L I G+ D Sbjct: 144 GLLIKQAGQSPRFLAICEKDKTLLLSEWLTDGWQLTTQAFWQLLDIEAGVPAIFNDSKEQ 203 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGS 218 F P + ++L+ G+S KGCY GQEVV+R+ + +R + G+ +LP + + Sbjct: 204 FTPQQVN-----LELVGGVSFKKGCYPGQEVVARLHYLGSPNRRMFLARVGSGELPQANT 258 Query: 219 PILTDDIEIGTLGVVV 234 P+ DD TLG VV Sbjct: 259 PVSDDDDN--TLGHVV 272 >gi|261330733|emb|CBH13718.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 339 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 56/322 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61 LS+++ ++V G A FLQ + T D+ L + L G+++ LY E Sbjct: 7 LSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPE 66 Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------- 103 + T ++++ D+L++ L Y++R + I VV++ Sbjct: 67 GQATIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDSAGS 126 Query: 104 --------WNQEHTFSNSSFIDERFSIADVLLH-RTWGHNEKIASDI------------- 141 + + S +D ++A+ R++ + I Sbjct: 127 SPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSE 186 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R Sbjct: 187 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 246 Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 KR P+ + G + P ++ + ++G + G L + R++ VD + Sbjct: 247 KRTVPLFLQGELFDGKEGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 306 Query: 253 K--GMALTVHGVRVKASFPHWY 272 G++L+ G V A P W+ Sbjct: 307 SFPGLSLS-DGTTVDARIPEWW 327 >gi|182412329|ref|YP_001817395.1| folate-binding protein YgfZ [Opitutus terrae PB90-1] gi|177839543|gb|ACB73795.1| folate-binding protein YgfZ [Opitutus terrae PB90-1] Length = 277 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A FLQ T D+ + G L + ++L + + ED F + + Sbjct: 1 MSGPDAFTFLQGQFTNDLRAIAAGPVYG-LWLNQKARVLADSFVFRTAEDEFWVGSYFAA 59 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIAD---VLLH 128 ++ ++L Y + +V +E + + V L+ + N S + RF A + Sbjct: 60 ARTISERLEAYIIADDVTVEDRTASWVGLTVSGSEVGENVSRTLRERRFEFAGRRGIDQA 119 Query: 129 RTW--------GHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 R W NE++ ++ R+ I TD P + P++ ++ + Sbjct: 120 REWFLPIEEAERVNERLGGAVELNAAEMERRRVGARIPAVPTDIGPGEL-PNEGGLEAV- 177 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 IS TKGCY+GQEV++R++ +R+R ++ GTD +P +P+ + ++G L Sbjct: 178 AISYTKGCYLGQEVIARLRSMGQVRRRLFLVRGTDAMPARPAPLFQGERQLGEL 231 >gi|302803303|ref|XP_002983405.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii] gi|300149090|gb|EFJ15747.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii] Length = 406 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 15/144 (10%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D + Y R+ GI + + P + ++ LN I KGCY+GQE+V+R HR + Sbjct: 262 DEQYYLLWRLEQGIPEGPAEIRGGEAIPLEYNLEGLNAIDFDKGCYVGQELVARTHHRGV 321 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEI---------GTLGVVVGKKALAIARIDKVDH- 249 IRKR M + D S ++ EI GT+ +G + A+ R++ V Sbjct: 322 IRKRVMPVIFLDKDGEEISEAVSHGAEIVDAESSKKMGTVTTALGSRGFALVRLEAVSKR 381 Query: 250 -AIKKGMALTVHGVRVKASFPHWY 272 +I GMA ++VK P W+ Sbjct: 382 LSIGGGMA----SIQVKVLRPKWW 401 >gi|290996284|ref|XP_002680712.1| predicted protein [Naegleria gruberi] gi|284094334|gb|EFC47968.1| predicted protein [Naegleria gruberi] Length = 448 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y +R+ GI + + D + FP ++ + + GI KGCY+GQE+ +R HR IRKR Sbjct: 306 YERIRLLSGIAENSVDIPSDSAFPMESGFEQIGGIHFGKGCYVGQELTNRTFHRGEIRKR 365 Query: 204 PMIITGTDDLPPSGSPI 220 +II G D LP +GS + Sbjct: 366 IVIIKG-DKLPEAGSDL 381 >gi|149926475|ref|ZP_01914736.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter sp. MED105] gi|149824838|gb|EDM84052.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter sp. MED105] Length = 350 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 26/231 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS+ +LS I V G A+ FLQ+ ++ DV + R + + T +G++L F + + Sbjct: 51 MSAQFLSRWGVIGVDGDDAVTFLQSQLSNDVAGMAESQLRMAGLCTAKGRLLGSFFVLRH 110 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQE 107 + F++ + +L+ +L + LRS + + P + + + W+++ Sbjct: 111 GKQVFLV-CRQETVTALVKRLSMFVLRSKCKVRDCTADYQLAFVPDSGPTSPMRVQWDEQ 169 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNTD-FLP 162 T + +S S L G E+ ++ + +L I + + P + F+P Sbjct: 170 GT-ATASLRALNGSTPGFQLVVGNGKTEQSSAADDQFEFALQQLGIAY-VSQPTVEMFIP 227 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 I DL+ G+S +KGCY GQE+V+R + +++R T T L Sbjct: 228 QAI-----NFDLVGGVSFSKGCYPGQEIVARSHYLGKVKRRVFQATATGSL 273 >gi|149197871|ref|ZP_01874920.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155] gi|149139092|gb|EDM27496.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155] Length = 554 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 27/242 (11%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ A LQ T+DV L K A+ S++L PQGKI+ + + K++E F L + Sbjct: 25 LRVSGEDADKVLQGQSTSDVKVLGAKTAQLSSLLNPQGKIISHHFLIKLDEACFYLLCSK 84 Query: 72 SKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVLSWNQEHTFSNSSFIDER 119 S D + D L + + + +EI P + ++ + N ++ ++ Sbjct: 85 SVIDEVKDHLEKHIIMEDADLEICKSFKTFHLKNTDPSSELISNMNIHQIEPEKLYVHDQ 144 Query: 120 FSI---------ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + + +L+ + + + D +T+ R+ G + D+ T+ P Sbjct: 145 HLLLTMGMLGLDSSILITKDGSQPDLGLEMDDETFKAFRMEAGFPIMDHDYDQKTLLPET 204 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPMIITGT--DDLPPSGSPILTDDIE 226 L L+ +S TKGC+ GQE+V+R+++R N+ R +I +DL + + D + Sbjct: 205 GLQ--LHCVSYTKGCFTGQEIVARVKYRGNVNRYLSALIANEVPNDLQQNDTLSTIDGNK 262 Query: 227 IG 228 IG Sbjct: 263 IG 264 >gi|293390940|ref|ZP_06635274.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951474|gb|EFE01593.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 295 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 27/231 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 LS+ + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + + Sbjct: 17 LSHYTLIEMAGVDAEKYLQGQLTCDVT----KLAAGESTLTAHCDPKGKMSALFRLIRQD 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 E TF + + S +D+L Y + S V P++ ++ I + Sbjct: 73 EQTFYMLLKSELLPSALDQLKKYAVFSKVTFT--PLDWQIIGAAGAKGIEKCGQISAQIR 130 Query: 122 IA-------DVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170 +A +LL+ T E A + + L I G+ V F+P + Sbjct: 131 VAVNDRQPRVILLNPTRLSIEPTA-EANVWDLLDIQDGVPGLAVATQLQFIPQAL----N 185 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 L + IS KGCYIGQE V+R ++R ++ I T+ LP GSP+ Sbjct: 186 LQSIEQAISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236 >gi|253998575|ref|YP_003050638.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4] gi|253985254|gb|ACT50111.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4] Length = 344 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V G+ I FLQ +T D+ L + + T +G++L FL + + Sbjct: 42 LSHLGLLQVDGEDTITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFL-AFAHQGHI 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLSW--NQEH 108 L+++ + ++ +L Y LRS V+I+ + I G + + + H Sbjct: 101 HLQLNGRLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTEVH 160 Query: 109 TFS---NSSFID-----ERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDP 156 S N++ I RF I A W E+ + + L I GI Sbjct: 161 GISTQENATLIRLPGALPRFEIFTAQENAQELWQELEQHFDPVGQTGWDWLEIEAGI--- 217 Query: 157 NTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD 211 + P+T P +D L GI+ KGCY GQE+V+R + +++R +I +T TD Sbjct: 218 -PEIFPATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATD 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALA 240 LP G + + E +G VV +A Sbjct: 277 SLPQPGDEVFAGEGE--AVGQVVRSSGIA 303 >gi|16272414|ref|NP_438627.1| hypothetical protein HI0466 [Haemophilus influenzae Rd KW20] gi|260580471|ref|ZP_05848299.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW] gi|1175250|sp|P44000|Y466_HAEIN RecName: Full=Uncharacterized protein HI_0466 gi|1573444|gb|AAC22125.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092813|gb|EEW76748.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW] Length = 280 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T + S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPNFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EKRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|299470070|emb|CBN79247.1| conserved unknown protein [Ectocarpus siliculosus] Length = 376 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 56/240 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLISK 59 + L ++ +++ G A LQ ++T D+ L + +A L P+G+++ L++ Sbjct: 6 AAVLEGRAVLEISGVDAKALLQGLMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVT- 64 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEH----- 108 RS R K L YKLRS V I+ ++GV W Sbjct: 65 -----------RSPRHEAKGKPL-YKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGG 112 Query: 109 ---------------TFSNSSFIDERFSIADVLLHRT----------WGHNEKIASDIKT 143 + F D R + V L R W + + + + Sbjct: 113 DVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGPDGADWPDGDPVVPEGR- 171 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 YH LR+ +G+ + ++ L S P ++ +DLL IS TKGCY+GQE+ +R Q + +RKR Sbjct: 172 YHALRMANGVGE-GSELLDS--IPLESNLDLLGSISFTKGCYVGQELTARTQFKGFVRKR 228 >gi|117927009|ref|YP_867626.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus sp. MC-1] gi|117610765|gb|ABK46220.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus sp. MC-1] Length = 328 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 49/311 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--KIE 61 V S+ + G FL +IT + + + A + +LTPQG+ L F+I+ +++ Sbjct: 20 VDWSHTGVATITGDERKDFLSGLITNQIKRVTPECAIYAGLLTPQGRYLWDFIIAEQQMD 79 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------------- 93 E+ +L + +LI +L Y LR+ + Sbjct: 80 ENPRLLLLTEPGIQNLIGRLSMYLLRAKAKVSDASTTLGSLIVTGPQAPQVLTRLYADID 139 Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 + P GV++ + H + E+ + ++ + + Sbjct: 140 FANQEPGTTVAPEAGVLVLKDPRHAAFGWRLVAEQAQLPNLWERLQAAQATPVG--FHAW 197 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 R+ + D P +A + G+ TKGCY+GQE +R HR ++KR Sbjct: 198 ESYRVAQALPRGGNDLEADITLPLEAGFLEMQGVDFTKGCYVGQETTARTHHRGTLKKRL 257 Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVH 260 + + P I++ +D E G L + G +ALAI R+ + G L + Sbjct: 258 FQVRWQEAASPKLGDIISVGEDKEAGHLTSISPAGGEALAIIRVSDWE----SGKPLMLG 313 Query: 261 GVRVKASFPHW 271 ++ + P W Sbjct: 314 QTPLQVTKPAW 324 >gi|269101838|ref|ZP_06154535.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161736|gb|EEZ40232.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 323 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 38/244 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + + G+ A +LQ +T DV++LP + + A +GK+ F + ++ Sbjct: 26 LHDWAAVTLVGQDAKSYLQGQVTCDVVSLPEQESTLGAHCDAKGKMRTIFRLFHHQQGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++ +S DS + +L Y + S V EI+P N V+L +FID+ F+ Sbjct: 86 YIQ-RQSVMDSQLPELKKYAVFSKV--EIKPSNEVILGIAGSDA---QAFIDQHFNGTSN 139 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP-------STIF------------ 166 + H G KI D + + +L I+ + + LP ST++ Sbjct: 140 VRHHDQGSAIKI--DEQRW-QLLISPELAEQLIHALPEKATCCDSTLWDLYDIRAALPRI 196 Query: 167 ---------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPS 216 P + ++GIS KGCY+GQE V+R ++R I ++ I+TG D P + Sbjct: 197 DSAIELEFIPQALNLQAVDGISFKKGCYVGQETVARAKYRGINKRAMFIVTGHADHAPQA 256 Query: 217 GSPI 220 G I Sbjct: 257 GDSI 260 >gi|74318116|ref|YP_315856.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus denitrificans ATCC 25259] gi|74057611|gb|AAZ98051.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus denitrificans ATCC 25259] Length = 354 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 46/264 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G FLQ +T DV LP A+ + +P+G++L FL + D + Sbjct: 55 LSQLGVIALRGADTAGFLQGQLTNDVRNLPADGAQWNGYCSPKGRLLANFLAWR-NGDDY 113 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-----------------------------IIEIQP 96 L++ ++ +L + LR++V + E + Sbjct: 114 CLQLSGDILAGVLKRLSMFILRADVKARDASEETVRLVVAGKDAAAAVRAAMGELPEAE- 172 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELRINHGI- 153 + + L+ Q + F+ SIA W + + A+ + + +R+N GI Sbjct: 173 MRTIALAAGQVVRVGDDKFV---LSIAPERAAEVWQNLTRSATPVGAPVWDWMRLNAGIP 229 Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 F+P + ++L+ G+S KGCY GQE+V+R Q+ +++R M++ Sbjct: 230 MIVAATQEQFVPQMVN-----LELIGGVSFQKGCYPGQEIVARSQYLGKLKRR-MVLAHA 283 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234 D G + + D++ G VV Sbjct: 284 DAEAAPGDSLYSADLDGQASGTVV 307 >gi|296135946|ref|YP_003643188.1| folate-binding protein YgfZ [Thiomonas intermedia K12] gi|295796068|gb|ADG30858.1| folate-binding protein YgfZ [Thiomonas intermedia K12] Length = 314 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 40/249 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++ Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------IQP 96 + L +D S + + +L + LR ++ QP Sbjct: 65 EQIGLLLDASIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLAPPAQP 124 Query: 97 IN-------GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR- 148 ++L Q + + ER A L + ++R Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQAAQAALRAELAVLPALPPSEWALQDIRA 184 Query: 149 -INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + H F+P + +L+ G++ KGCY GQEVV+R Q+R +++R ++ Sbjct: 185 GLPHLTAATQQLFVPQMLN-----FELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVV 239 Query: 208 TGTDDLPPS 216 TG + P Sbjct: 240 TGPAAMQPG 248 >gi|67515557|ref|XP_657664.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4] gi|40746082|gb|EAA65238.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4] Length = 1243 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 51/184 (27%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR + Sbjct: 1026 DLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHRGV 1085 Query: 200 IRKRPMIITGTDD---------------------LPPSGSPILTDDIEIGT-----LGVV 233 +RKR + + +D LPP+GS I G LG + Sbjct: 1086 VRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLGGI 1145 Query: 234 VGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASFP 269 G LA+ R++ + D + G L V+VKA P Sbjct: 1146 -GNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIVP 1204 Query: 270 HWYK 273 W + Sbjct: 1205 TWTR 1208 >gi|115717980|ref|XP_799220.2| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 251 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 31/228 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62 L+ +S + V G+ A LQ ++T DV L + S L QG++L + + + Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSK 84 Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 D +++LE D + L L Y++R V +I ++ W+ FS Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWS---IFSPGPTP 139 Query: 117 DERFSIADVLLH-----RTWGHNEKI----ASDIKTYHEL--------RINHGIVDPNTD 159 H R G +++ S + E+ R G+ + + Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPI 247 >gi|187478257|ref|YP_786281.1| aminomethyl transferase [Bordetella avium 197N] gi|115422843|emb|CAJ49371.1| putative aminomethyl transferase [Bordetella avium 197N] Length = 319 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 40/235 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I G A+ FL +T DV L AR + T +G++L LI + ++ + Sbjct: 25 ISAAGPDALGFLHGQLTQDVNGLAADGARLAGYCTAKGRLLATLLIWRASPESVHALVRA 84 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSFIDERFSIADVL 126 ++L+ +L + LR+ + I + ++ +S +H T + + ++ AD L Sbjct: 85 DLAEALVKRLSMFVLRAKLKISLTDLSVAGVSAGPDHLDALGTAAGGALPSTAWARAD-L 143 Query: 127 LHRTW----GHNEKI-------------------ASDIKTYHELRINHG---IVDPNTD- 159 TW G+N + +D +++ + G I D Sbjct: 144 SSGTWIAAPGNNLRWWWVAGAGQMQGQALRALLSEADEESWRAADLAAGLPWIAKATQDL 203 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 F+P T+ ++L+ G+S TKGCY GQEVV+R +R +++R + G LP Sbjct: 204 FIPQTVN-----LELIGGVSFTKGCYPGQEVVARSHYRGTVKRR--MAHGVSALP 251 >gi|72393355|ref|XP_847478.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70803508|gb|AAZ13412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 339 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 56/322 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61 LS+++ ++V G A FLQ + T D+ L + L G+++ LY E Sbjct: 7 LSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPE 66 Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------- 103 + T ++++ D+L++ L Y++R + I VV++ Sbjct: 67 GQVTIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNAGS 126 Query: 104 --------WNQEHTFSNSSFIDERFSIADVLLH-RTWGHNEKIASDI------------- 141 + + S +D ++A+ R++ + I Sbjct: 127 SPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSE 186 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R Sbjct: 187 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 246 Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 KR P+ + G + P ++ + ++G + G L + R++ VD + Sbjct: 247 KRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 306 Query: 253 K--GMALTVHGVRVKASFPHWY 272 G++L+ G V A P W+ Sbjct: 307 SFPGLSLS-DGTTVDARIPEWW 327 >gi|145628842|ref|ZP_01784642.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21] gi|145638619|ref|ZP_01794228.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII] gi|260582268|ref|ZP_05850061.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127] gi|144979312|gb|EDJ88998.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21] gi|145272214|gb|EDK12122.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII] gi|260094636|gb|EEW78531.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127] gi|309750118|gb|ADO80102.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|261867315|ref|YP_003255237.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412647|gb|ACX82018.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 295 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 27/231 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 LS+ + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + + Sbjct: 17 LSHYTLIEMAGVDAEKYLQGQLTCDVT----KLAAGESTLTAHCDPKGKMSALFRLIRQD 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 E TF + + S +D+L Y + S V P++ ++ I + Sbjct: 73 EQTFYMLLKSELLPSALDQLKKYAVFSKVTFT--PLDWQIIGAAGAKGIEKYGQISAQIR 130 Query: 122 IA-------DVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170 +A +LL+ T E A + + L I G+ V F+P + Sbjct: 131 VAVNDRQPRVILLNPTRLSIEPTA-EANVWDLLDIQDGVPGLAVATQLQFIPQAL----N 185 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 L + IS KGCYIGQE V+R ++R ++ I T+ LP GSP+ Sbjct: 186 LQSIEQAISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236 >gi|148827663|ref|YP_001292416.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG] gi|148718905|gb|ABR00033.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EKRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|145636266|ref|ZP_01791935.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH] gi|145270431|gb|EDK10365.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|159481016|ref|XP_001698578.1| hypothetical protein CHLREDRAFT_187731 [Chlamydomonas reinhardtii] gi|158282318|gb|EDP08071.1| predicted protein [Chlamydomonas reinhardtii] Length = 816 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 48/213 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59 +L+++ + G A+ FLQ ++T DV L P + + +LTP+GK L IS+ Sbjct: 47 AHLTSRGVLLAEGPQALTFLQGMVTNDVRPLQTAGPAEPPVYATVLTPKGKFLHDLFISR 106 Query: 60 IEE--DTFILEIDRSKRDS---LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 + D +LE+D + + L++K L + +Q S S+ Sbjct: 107 HPDMPDALLLEVDAAGATAAMQLLNKPLVAAGPAPAAAGLQ---------------SASA 151 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 +E + R W R + G+ + + P D +D+ Sbjct: 152 AGEEAY--------RAW----------------RYSLGVAEGEAEIPAGQAAPLDFNVDV 187 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L G+S TKGCY+GQE S +R +IRKR M + Sbjct: 188 LRGVSYTKGCYVGQERNSFTHYRGVIRKRLMPV 220 >gi|260797663|ref|XP_002593821.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae] gi|229279051|gb|EEN49832.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae] Length = 255 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 18/237 (7%) Query: 51 ILLYFLISKIEED-TFILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVVLSWN 105 IL+Y L S + + +LE D + SLI L YK+R V + + + ++ + Sbjct: 15 ILMYNLQSNPDSPPSLLLECDHTAVPSLIKLLKMYKIRKKVDICSVADEYTVWALLPGTS 74 Query: 106 QEHTF---SNSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTD 159 F + S ID R + G N + + + YH R G+ + D Sbjct: 75 DPPVFVSDTGLSVIDPRLPDLGNRVVLKSGTNLVFDCVEGTSEDYHTHRYQLGVGEGVND 134 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 P + + LNG+S KGCY+GQE+ +R H +IRKR M +T Sbjct: 135 LPTGNCTPLECNLAFLNGVSFDKGCYVGQELTARTHHTGVIRKRLMPVTLDRPASLEAGS 194 Query: 220 ILTDD--IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272 LT++ +G G +A+ R+ H+ +K G V +KA P W+ Sbjct: 195 TLTNEKGKNVGKFRHAQGVHGIALVRL---AHSQEKLYCKQDSGEEVGLKAETPKWW 248 >gi|145630355|ref|ZP_01786136.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae R3021] gi|144984090|gb|EDJ91527.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae R3021] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|319760397|ref|YP_004124335.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str. BVAF] gi|318039111|gb|ADV33661.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str. BVAF] Length = 331 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 55/266 (20%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58 ++ + L N IK+ GK +IP+L T D+ L S+ QGK++ +Y Sbjct: 20 LTLISLKNWILIKLTGKDSIPYLHNQFTCDIKNLNINKYTFSSHCNVQGKMITNMYVFYF 79 Query: 59 KIEEDTFIL-------EIDRSKRDSLIDKL-----------------------LFYKL-- 86 E FI +I+ K+ S+ K+ +F+K Sbjct: 80 NKYELAFICPTNVYKKQIEILKKYSIFSKVNIIPDYNVTLLGVAGSNAKQYLSIFFKTLP 139 Query: 87 -RSNVIIEIQPINGVVLSWNQEHTF---SNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 + N I+ Q I+ + +E ++S A L + H++ I+ DI+ Sbjct: 140 NQINTIVHHQGISVLYFHLPKERFLLIVHDNSLFYSLLKEAQFLSAQYNNHSQWISLDIE 199 Query: 143 TYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + P D L S +F P A +DLL GIS KGCY+GQE+++RIQH + + Sbjct: 200 SGY----------PYIDILTSEMFFPQAANIDLLGGISFNKGCYLGQELIARIQHYKLNK 249 Query: 202 KRPMIITGTDD------LPPSGSPIL 221 + +TGT D +P SG+ ++ Sbjct: 250 QSLHKLTGTIDTNKHNQIPISGNYLM 275 >gi|145640439|ref|ZP_01796023.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021] gi|145275025|gb|EDK14887.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.4-21] Length = 280 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|70997319|ref|XP_753409.1| aminomethyl transferase [Aspergillus fumigatus Af293] gi|74673542|sp|Q4WVK5|CAF17_ASPFU RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|66851045|gb|EAL91371.1| aminomethyl transferase, putative [Aspergillus fumigatus Af293] gi|159126864|gb|EDP51980.1| aminomethyl transferase, putative [Aspergillus fumigatus A1163] Length = 447 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 72/311 (23%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLISK 59 L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLIANDPRRATRRTGTYTAFLNSQGRVLNDAFIYP 107 Query: 60 I-----EEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108 + E DT +++E+D+++ SL+ L +KLRS + + ++ V S ++H Sbjct: 108 MPKGDSETDTTGDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167 Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139 + + S+A + R G ++ + Sbjct: 168 AEPRWAAYNLESESSSPFAPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGS 227 Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H Sbjct: 228 QVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHT 287 Query: 198 NIIRKR--PMIITGTD----------------DLPPSGSPILTDDIEIGT-----LGVVV 234 ++RKR P+ + LPPSGS I D G LG V Sbjct: 288 GVVRKRIVPVQLYANSAPQSGDTPVYDPSAAVALPPSGSNISKVDGRKGRSAGKFLG-GV 346 Query: 235 GKKALAIARID 245 G LA+ R++ Sbjct: 347 GNIGLALCRLE 357 >gi|301169187|emb|CBW28784.1| predicted folate-dependent regulatory protein [Haemophilus influenzae 10810] Length = 280 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|319898015|ref|YP_004136212.1| hypothetical protein HIBPF18630 [Haemophilus influenzae F3031] gi|317433521|emb|CBY81904.1| conserved hypothetical protein [Haemophilus influenzae F3031] Length = 280 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|229846552|ref|ZP_04466660.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1] gi|229810645|gb|EEP46363.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1] Length = 280 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|319775606|ref|YP_004138094.1| hypothetical protein HICON_09480 [Haemophilus influenzae F3047] gi|329122346|ref|ZP_08250933.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116] gi|317450197|emb|CBY86413.1| conserved hypothetical protein [Haemophilus influenzae F3047] gi|327473628|gb|EGF19047.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116] Length = 280 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 E+ SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|254522474|ref|ZP_05134529.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14] gi|219720065|gb|EED38590.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14] Length = 291 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 25/272 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + G A+ F A ++DV LP + SA L+ +G+ L F + ++ ED Sbjct: 15 LPGHPLLSLQGADAVVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLAEDHV 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------------- 110 +L + D++ +L + R V + ++ V ++ Sbjct: 75 LLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAHAAGDGWEL 134 Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF- 166 S++ R AD G A+ + + + +G+ P + ++ Sbjct: 135 DLGSDALPRTLRIGAADAFAA---GSEADEAAFALAWRQADLRYGL--PRLEESQREVWT 189 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D LNG S+ KGCY GQE+V+R H KR + + T +G + D Sbjct: 190 PQQLGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAMPAQAGDGVQQDGAA 248 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258 +GT+ V G ALA+ ++ D ++ G A+ Sbjct: 249 LGTIASVAGDLALAVLPLEASDADLQVGGAVA 280 >gi|66811634|ref|XP_639996.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4] gi|74853999|sp|Q54NS1|CAF17_DICDI RecName: Full=Putative transferase caf17 homolog, mitochondrial; Flags: Precursor gi|60466925|gb|EAL64969.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4] Length = 408 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 49/257 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59 V L ++S IKV G A+ LQ + T ++ L + ++I L G++L +IS Sbjct: 15 VPLKSRSLIKVVGPDALKHLQGLTTNNLNRLKDNQSTNTSIYNGFLQGNGRLLFDSIISL 74 Query: 60 IEE---------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP- 96 E D+FI++ID S + + L YKLR+ + II++ Sbjct: 75 DREHHNGNPKPISMAPGSSDNSGLDSFIVDIDSSILEEAMAHLKQYKLRNKIDIIDVTEN 134 Query: 97 ------INGVVLSWNQEHTFSN------SSFIDERFSIADVLL----HRTWGHNEKIAS- 139 ++ + + F+ S +D R I V L ++ E+++ Sbjct: 135 FNVYSILDKTYKTVRDDSLFAQLEKDQCSVMMDPRHQIMGVRLLVPNNKQLVVEERLSKY 194 Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 D Y+ R++ GI ++ I P + DLLNG+ KGCY+GQE+ SR Sbjct: 195 ESKDETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHF 254 Query: 197 RNIIRKR--PMIITGTD 211 +IRKR P++++ D Sbjct: 255 TGLIRKRIFPVVMSVKD 271 >gi|88703563|ref|ZP_01101279.1| aminomethyltransferase [Congregibacter litoralis KT71] gi|88702277|gb|EAQ99380.1| aminomethyltransferase [Congregibacter litoralis KT71] Length = 337 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 44/273 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +L ++ + + G FLQ +T D L + A A+ +G++L + + + Sbjct: 23 ACFLPGEAMLHLRGSKVPEFLQGQLTCDTRKLGPERALMGALCNVKGRVLSDLTVLYVSD 82 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 IL + RS ++ L Y S + +E+ +L + + +R Sbjct: 83 AHLILRLRRSVAATIAKTLERYAQFSRISVELAAEEHSILGLGGRDFAAECAIDGDRSDA 142 Query: 123 AD-------------------VLLHRTWGHNEKIASD------IKTYHELRINHGIVDPN 157 AD +LL R GH E IA D + + + VDP Sbjct: 143 ADSASNTVSPGSLPVTLRDDALLLQRGPGHGEVIAIDDAPARALASQGTASGSQADVDPV 202 Query: 158 TDFLPSTI--------------FPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T + +T+ F AL DL ++ KGCY GQE+V+R+ ++ +K Sbjct: 203 TSWEAATLRTGHYALELEDLECFTPQALNYDLSGLVAFDKGCYTGQEIVARLHYKGRSKK 262 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 R I G + L PI D G G +VG Sbjct: 263 RLQIFEGPETL----GPIARDTSLQGESGEIVG 291 >gi|124267051|ref|YP_001021055.1| hypothetical protein Mpe_A1862 [Methylibium petroleiphilum PM1] gi|124259826|gb|ABM94820.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 323 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 42/257 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V L + I+ G A FL +T D+ L AR +A +P+G++L F+ K Sbjct: 14 GAVRLLHSGVIRAAGADAASFLHGQLTNDMTGLGLGEARLAAYCSPKGRMLASFVAFKRS 73 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SW-NQEHTFSN 112 D L + + +L + LR+ + + V++ +W Q + Sbjct: 74 HDEIWLACRSDVLPATLKRLRMFVLRAKAQLSEGGDDAVLVGLAGRSAAAWLAQVLPAAV 133 Query: 113 SSFIDERFSIADVLLHRT----------WGH---------NEKIASDIKTYHELRINHGI 153 + + R ++ D LL R W N A ++ + L ++ G+ Sbjct: 134 NGAVWSRHALDDALLVRLPDGAGQARWLWAGPAAQTDAVLNALPALALERWDWLEVHSGV 193 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---- 209 P P +L+ G++ KGCY GQE+V+R Q+R I++R ++ G Sbjct: 194 A-PIVANTVEAFVPQMLNYELVGGVNFQKGCYPGQEIVARSQYRGTIKRRAALVHGDAAA 252 Query: 210 ---------TDDLPPSG 217 DD PSG Sbjct: 253 LPGQEVFWSGDDAQPSG 269 >gi|145632732|ref|ZP_01788466.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655] gi|145634537|ref|ZP_01790246.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA] gi|229844374|ref|ZP_04464514.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1] gi|144986927|gb|EDJ93479.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655] gi|145268082|gb|EDK08077.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA] gi|229812623|gb|EEP48312.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1] Length = 280 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171 E+ SI + L + +EKI + I G+ + P T +F+P + L Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|226294152|gb|EEH49572.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1192 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 19/100 (19%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D TY+ RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR + Sbjct: 973 DFATYNLRRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGV 1032 Query: 200 IRKR-----------PMIITGTDD--------LPPSGSPI 220 +RKR PM T T D LPP+G+ I Sbjct: 1033 VRKRILPVRFYDINDPMPTTDTPDYSSESKLTLPPAGANI 1072 >gi|119478829|ref|XP_001259454.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181] gi|119407608|gb|EAW17557.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181] Length = 375 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H + Sbjct: 158 DLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGV 217 Query: 200 IRKR--PMIITGTDDLPPSGSPI 220 +RKR P+ + LP +P+ Sbjct: 218 VRKRIVPVQLYAKSPLPSGETPV 240 >gi|50550805|ref|XP_502875.1| YALI0D15774p [Yarrowia lipolytica] gi|74634509|sp|Q6C8Y7|CAF17_YARLI RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49648743|emb|CAG81063.1| YALI0D15774p [Yarrowia lipolytica] Length = 479 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 58/254 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKIL----LYFLISK 59 ++++ + V G+ A L + T V + P+ G A L +G+++ LY + Sbjct: 45 NSKTMVHVSGRDAAKLLNGLFTLPVSSGAATPFSGVFG-AFLNGKGRVITDAFLYTTSNH 103 Query: 60 IEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------F 110 EED +F++E D++ D L+ L +++R+ V +E + WN++ T Sbjct: 104 TEEDQSFVIEFDKAVEDELLLHLKRHRIRAKVKMEKLTDYECIFIWNRDATPDYWRRENE 163 Query: 111 SNSSF------------------------------------IDERFSIADVLL-----HR 129 +S F +D+R+ + + + Sbjct: 164 CDSGFFQSLCEVAWSVAEVGETSEVEEKNGEPAQKPLYGLLVDDRYPLLGIRMILPAKTS 223 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 T + ++++ Y+ LR G + + + P+ P ++ +D +NG+ +GCY+GQE Sbjct: 224 TTYFSAIPSANLTQYNMLRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYVGQE 283 Query: 190 VVSRIQHRNIIRKR 203 + R H ++RKR Sbjct: 284 LTIRTHHTGVVRKR 297 >gi|224826501|ref|ZP_03699602.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002] gi|224601102|gb|EEG07284.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002] Length = 325 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 41/241 (17%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S I+V G+ A FLQ +++D+ + ++ S+ +G++L FLI + D F+L + Sbjct: 32 SIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRVLGNFLIWQFRGDYFLL-V 90 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEI--QP--INGVVLSWN-------------QEH-TFS 111 +L +L + LRS V +E+ +P + GV Q H + Sbjct: 91 SADIATALCRRLSMFVLRSEVKLEVLAEPWLLAGVKGGGAEAVLKDVFTEVPAQPHDVIA 150 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGI---VDPNTD 159 N S R ++LL + I S ++ + L I G+ P + Sbjct: 151 NESGAIIRLPAGNLLLSYDASASGSIKSRLEQACRQVGVEAWSLLDIAAGVPWVTRPTQE 210 Query: 160 -FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 F+P I MD+L GIS KGCY GQE+V+R Q+ +++R + +LP S Sbjct: 211 QFVPQMIN-----MDVLGGISFKKGCYPGQEIVARTQYLGKVKRRLFRV----ELPVKAS 261 Query: 219 P 219 P Sbjct: 262 P 262 >gi|73541126|ref|YP_295646.1| glycine cleavage T protein (aminomethyl transferase) [Ralstonia eutropha JMP134] gi|72118539|gb|AAZ60802.1| Glycine cleavage T protein (aminomethyl transferase) [Ralstonia eutropha JMP134] Length = 373 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 120/308 (38%), Gaps = 53/308 (17%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 +I+V G A FL +T V L AR + +P+G++ FL+ + + D +L++ Sbjct: 66 GWIRVAGDDAAAFLHTQLTNAVEDLGPGAARLAGYCSPKGRLQASFLMWR-DADGIVLQL 124 Query: 70 DRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQ--------------EHTFSNSS 114 + +L +L + LR+ + ++ P+ VV + + F +S Sbjct: 125 SDDIQPALQKRLSMFVLRAKAKLSDMSPVVAVVGAAGPQAAQALAKAGLPAPDAVFGTAS 184 Query: 115 FIDER-FSIADVLLHRTWG---------------HNEKIASDIKTYHELRINHGI----V 154 + D W E +D + L + GI Sbjct: 185 VESATVIRLPDAAGQPRWQAVLPAERAGEFRAALSGELADADSAFWDWLDVQSGIPRIVT 244 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 F+P I +L+ G++ KGCY GQE+V+R Q+R +++R ++ G +P Sbjct: 245 ATQEQFVPQMIN-----FELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGDGAVP 299 Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI----KKGMALTVHGV 262 + I + G+VV G LA +ID A+ +G ALTV + Sbjct: 300 APATEIFRPEDPQQPCGMVVNAAPAPQGGWAGLAELKIDAAASALHLGSAEGAALTVGEL 359 Query: 263 RVKASFPH 270 + P Sbjct: 360 PYEVPLPE 367 >gi|94310768|ref|YP_583978.1| glycine cleavage T protein (aminomethyl transferase) [Cupriavidus metallidurans CH34] gi|93354620|gb|ABF08709.1| putative glycine cleavage T protein (aminomethyl transferase) [Cupriavidus metallidurans CH34] Length = 336 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 53/292 (18%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 I+V G A FL + +T V L AR + +P+G+++ FL+ + + D +L++ Sbjct: 29 GLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWR-DADGIVLQL 87 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSWNQEHTF 110 + + +L + LR+ + +Q G+ T Sbjct: 88 SADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQ-QAGLPTPQAPLATA 146 Query: 111 SNSSFIDERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELRINHGI--- 153 S+ + R + AD L ++ G +AS + L + GI Sbjct: 147 SDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVASP-AFWDWLDVASGIPRI 205 Query: 154 -VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 F+P I +L+ G++ KGCY GQEVV+R Q+R +++R + GT D Sbjct: 206 AAATQEQFVPQMIN-----FELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGD 260 Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256 +P + + I + G++V G + LA +ID + A+ G A Sbjct: 261 VPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAA 312 >gi|148825254|ref|YP_001290007.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE] gi|148715414|gb|ABQ97624.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE] Length = 280 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171 E+ SI + L + +EKI + I G+ + P T +F+P + L Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|226480062|emb|CAX73327.1| hypotherical protein [Schistosoma japonicum] Length = 396 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 37/241 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +S I V G SA FLQ + T D+ ++ + S ++ I +S + D + Sbjct: 26 LKERSLICVRGTSADEFLQGLTTNDIKSINHP---NSFMVLTDAFIYHTNRLSANQSD-Y 81 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-------------------------PINGV 100 ++E+D + L+ L Y LR V I+ P++ Sbjct: 82 LIEVDANYVPDLVKHLNRYNLRGKVKIDANVPIHLWIAMPKSKQSNKLSDYKAWSPVDSF 141 Query: 101 VLSWNQEHTFSNS------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 LS ++ F S + S D ++ + + DI YH R G+ Sbjct: 142 ALSDQRQLIFFASDPRGISGWSGRILSTPDASVNDIFPSCDTHPLDISLYHTARWELGLP 201 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212 + +F+ + P +A DL G+S +KGCYIGQE+ +R +IR+R P+ I T + Sbjct: 202 EGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGVIRRRYVPIKILSTGN 261 Query: 213 L 213 + Sbjct: 262 I 262 >gi|309972377|gb|ADO95578.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 280 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + F L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171 E+ SI + L + +EKI + I G+ + P T +F+P + L Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-TNKRAMFI 205 >gi|253996915|ref|YP_003048979.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8] gi|253983594|gb|ACT48452.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8] Length = 335 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 40/232 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ +++ G A FLQ +T DV L + A +A TP+G++L FL + + + Sbjct: 35 LSHLGLLQLSGADAFTFLQGQVTNDVNQLKGETAHYTAYCTPKGRMLALFL-AFAQHERI 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV--------IIEIQ---PINGVVLSWN----QEH-- 108 L++ + +L Y +RS V II+I P +LS +H Sbjct: 94 HLQMPLELVAATAKRLKMYVMRSKVEVQDTSHDIIKIGLSGPNANALLSTQFAEIPQHDY 153 Query: 109 ---TFSNSSFID------ERFSIADVLLHRT--WGHNEKIAS--DIKTYHELRINHGIVD 155 T N S + RF I + H W AS + + L I G+ D Sbjct: 154 ELVTLDNGSLLKLPGSTHARFEIFTDINHAPAIWSALSAQASVANADYWEWLEIQAGVPD 213 Query: 156 --PNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P T +F+P + +DLL+GI+ KGCY GQE+V+R + I++R Sbjct: 214 VKPETQEEFVPQMLN-----LDLLSGINFKKGCYTGQEIVARTHYLGSIKRR 260 >gi|254283511|ref|ZP_04958479.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B] gi|219679714|gb|EED36063.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B] Length = 289 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 24/240 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S YL ++ +++ G A+ FLQ +AD + +G++L FL K+ Sbjct: 10 LSLAYLDQEAVLELTGPDAVSFLQGQSSADFSGSDTQKPILGTFCNVKGRVLADFLAFKV 69 Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---------KLRSNVIIEIQPINGVVLSWNQEHTFS 111 ++ +L + D+LI L Y + V I +G ++ ++E + Sbjct: 70 SDERILLRCEGQVGDALITHLQPYLNFSKSTLRRCEGVVYGGIGDQDGSNVTSSEEARDA 129 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT---YHELRINHGIVDPNTDFLPSTI--- 165 F RFS A H G + A+ + Y E+ N + +TI Sbjct: 130 GEWFAIPRFSGATEFWH--LGDHPAAATTVSADMWYSEMMRNE-----DARITGATIGKY 182 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTD 223 P D DL IS +KGCY GQE+++R+ ++ ++R T D P I+ D Sbjct: 183 LPQDLNYDLRGYISFSKGCYTGQEIIARLHYKGKPKRRLYRATCTAESDCAPGSDLIVGD 242 >gi|213405489|ref|XP_002173516.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275] gi|212001563|gb|EEB07223.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275] Length = 334 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 25/219 (11%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 + +++ + + G + FLQ + V+ K SA L + L+ + + + D Sbjct: 27 FFADRRLVFIEGIDTVKFLQGLAANKVVAGEPKY---SAFLNAKRTQLVDNV--QGQGDA 81 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV-LSWNQ-EHTFSNSSFIDERFS 121 F +EID ++ + + L ++LR+ V + + P V +WN S+ +D R Sbjct: 82 FAIEIDATRAAAFLQHLQRFQLRAKVRLAPVDPSRWCVQATWNDTREDSSDDGLVDTREH 141 Query: 122 IADVLLHRTWGHNEKIASDIK-----------------TYHELRINHGIVDPNTDFLPST 164 + L + W ++++ Y RI G+ + + + Sbjct: 142 LITSPLTQLWDPRFPETNNVRRAIVPPTSAPAQELSMEAYKAFRIQKGVAEGQREIISGE 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 FP ++ D L+G+ KGCY+GQE+ R R RKR Sbjct: 202 AFPLESNFDKLHGVHFQKGCYLGQELTYRSYQRGTTRKR 240 >gi|146162532|ref|XP_001009664.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila] gi|146146307|gb|EAR89419.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila SB210] Length = 381 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 61/249 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLI----- 57 L N+ I + GK A LQ I T D+ K A + L PQG+I+ LI Sbjct: 30 LQNRKIISLSGKDAKSILQGIQTNDMNLFSQQSNKAALYTQFLNPQGRIIFDALIIRPQV 89 Query: 58 -----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS------- 103 K +ED + ++++ + I + Y LR V + +N V + Sbjct: 90 VIQGELKTKEDEYWIDLESKQGADFIKHIKKYCLRKRVSLADFTNKVNVVTVYSDLIMQQ 149 Query: 104 -------WN----------QEHTFSNSSFIDERFS---------IADVL-LHRTWGHNEK 136 WN Q+ ++ + D R S D L L +T E+ Sbjct: 150 KEQEGDYWNHLDASIYEKTQDEIYTQVCYTDPRCSNLGMRCIVPSQDQLQLDKTI---EE 206 Query: 137 IASDIKTYHELRINHGIVDPN--TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + DI Y R+ GI + D LP T+ +D LNG+S TKGCY+GQE+ +R Sbjct: 207 KSQDI--YDAQRLVLGIAQGSEVADRLPFTVN-----LDFLNGVSFTKGCYVGQELTART 259 Query: 195 QHRNIIRKR 203 H I+R+R Sbjct: 260 YHTGIVRRR 268 >gi|121996857|ref|YP_001001644.1| glycine cleavage T protein (aminomethyl transferase) [Halorhodospira halophila SL1] gi|121588262|gb|ABM60842.1| glycine cleavage T protein (aminomethyl transferase) [Halorhodospira halophila SL1] Length = 318 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 48/252 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEEDTF 65 + + + V G A FLQ I+TAD+ K + + + TP+G++L L LI +D + Sbjct: 26 AGYAVVAVTGDEAQDFLQRILTADIPPPAAKHSVLAGLCTPKGRLLALARLIPW--DDGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------IQPINGVVLSWNQEHTFSNSS 114 L + + + +L Y LRS V + P VL+ H Sbjct: 84 RLVLPDDVAGATVSRLQMYVLRSRVTVAPPTPDWRLVRAAGPGARAVLAERCGHPLPE-- 141 Query: 115 FIDERFS-IADVLLHRTWGHNEKI---------------------ASDIKTYHELRINHG 152 +D S AD+ + R G E+ ++D + + I G Sbjct: 142 -VDGGVSHSADMAIVRMPGTPERYCAVGPASPVQALEHALAEYLPSADTAAWRAIEIRAG 200 Query: 153 ---IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I P + F+P + +D L G+S +KGC+ GQEVV+R +R +++R Sbjct: 201 QPEIRAPGRELFIPQMVN-----LDRLGGVSFSKGCFPGQEVVARTHYRGKVKQRMFRAA 255 Query: 209 GTDDLPPSGSPI 220 GT P G I Sbjct: 256 GTGPAPADGCEI 267 >gi|194220206|ref|XP_001918326.1| PREDICTED: similar to CG8043 CG8043-PA [Equus caballus] Length = 203 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-- 216 D P P ++ + +NG+S TKGCY+GQE+ +R H +IRKR + + LP S Sbjct: 81 DLPPGVALPLESNLAFMNGVSFTKGCYVGQELTARTHHMGVIRKRLFPVQFSGPLPASGI 140 Query: 217 --GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ +LT+ + G G LA+ +++K+ + A + V + AS P W+ Sbjct: 141 APGTSVLTESGQAAGKYRAGQGDVGLALLQLEKIRGPLHIRTAESGR-VALTASVPDWW 198 >gi|82702860|ref|YP_412426.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosospira multiformis ATCC 25196] gi|82410925|gb|ABB75034.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosospira multiformis ATCC 25196] Length = 348 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 40/264 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I G+ A FLQ ++ D+ A + P+G+IL FLI + D + Sbjct: 43 LSHFGLIHFWGEDAETFLQGQLSCDIRRATTSTASYGSYCNPKGRILATFLIWRTTGDGY 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------------------IQPINGVVL 102 ++++ + +L Y LR+ V + + I V L Sbjct: 103 LMQLPAILLAGIQKRLAMYVLRAKVKLADSSGAWVHIGVAGPHAAALLRKILGEIPVVPL 162 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDI--KTYHELRINHGIVDPN 157 S ++RF + +L + W + A+ + + L I GI Sbjct: 163 GVRHGERGSIIRLAEDRFQLL-ILPEQAPTIWEDLSRNATQVGKPCWDWLEIRAGI---- 217 Query: 158 TDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTD 211 LP+T P +D L GIS KGCY GQE+V+R Q+ I++R + Sbjct: 218 PHILPATQEQFVPQMVNLDTLGGISFQKGCYPGQEIVARTQYLGKIKRRMYLANVRPAAG 277 Query: 212 DLP-PSGSPILTDDIEIGTLGVVV 234 DLP +G + + D+ + G+VV Sbjct: 278 DLPIEAGDELFSADLGEQSAGMVV 301 >gi|71753323|ref|XP_826136.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62359621|gb|AAX80054.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 316 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R Sbjct: 164 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 223 Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 KR P+ + G + P ++ + ++G + G L + R++ VD + Sbjct: 224 KRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 283 Query: 253 K--GMALTVHGVRVKASFPHWY 272 G++L+ G V A P W+ Sbjct: 284 SFPGLSLS-DGTTVDARIPEWW 304 >gi|296284234|ref|ZP_06862232.1| aminomethyltransferase [Citromicrobium bathyomarinum JL354] Length = 247 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 20/215 (9%) Query: 1 MSSVYLSNQSFIKV----CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56 M++ L N++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + + Sbjct: 1 MTATRLQNRAVIRLSPTAAGEDVAGFLQGLLTNDVTG---ELPAYAALLSAQGKTMFDMI 57 Query: 57 I----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + + T +L+ + D L+ +L Y+LR IEI + + W+ E ++ Sbjct: 58 VWPGRAGEHGATILLDCEADMADDLVKRLSLYRLRRK--IEIARDESLAVHWSVEAIDAH 115 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 D R L HR + + R++ G+ + + +A+ Sbjct: 116 PP--DPRLP---ALGHRWLAPADDSEPADAAWLAHRLSLGVPEGRAELGDILWLETNAVE 170 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L+G+S +KGCYIGQE +R+ R + +R +++ Sbjct: 171 --LHGVSFSKGCYIGQENTARMNWRQKVNRRLVVV 203 >gi|33519725|ref|NP_878557.1| putative aminomethyltransferase [Candidatus Blochmannia floridanus] gi|81666840|sp|Q7VRF7|YGFZ_BLOFL RecName: Full=tRNA-modifying protein ygfZ gi|33504070|emb|CAD83331.1| aminomethyltransferase; glycine cleavage T-protein [Candidatus Blochmannia floridanus] Length = 336 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 16/111 (14%) Query: 121 SIADVLLHRTWGHNEKIASDIKTYHE---LRINHGIVDPNTDFLPSTIF-PHDALMDLLN 176 +I D LL++T + +YH+ L I G P DF S +F P A MD+L Sbjct: 171 TILDFLLNKT----QSFPIYYNSYHQWTALDIEAGY--PYIDFATSELFFPQAANMDILQ 224 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------DDLPPSGSPIL 221 GIS KGCYIGQE+V+RIQH + ++ +T + LP SG I+ Sbjct: 225 GISFNKGCYIGQELVARIQHYKLNKQSLYQLTSNTYHNQHNQLPVSGDHIV 275 >gi|34496817|ref|NP_901032.1| hypothetical protein CV_1362 [Chromobacterium violaceum ATCC 12472] gi|34102672|gb|AAQ59037.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 344 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 38/299 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N + I+V G+ A FLQ ++ D+ + + A+ S T +G++L FLI + + + Sbjct: 43 LDNFALIRVEGEDAAAFLQGQLSNDIREVTTERAQYSTYSTAKGRMLASFLIW-LRDGAY 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFIDE- 118 L + +++ +L + LRS V + + ++G+ + F ++ +E Sbjct: 102 YLMVSADIAETVAKRLTMFVLRSKVKVVLDREWSLLGVSGIAIEQALHKHFPGAAGAEEM 161 Query: 119 --RFSIADVLLHRTWG-------HNEKIASDIKTYHELR-----------INHGIVDPNT 158 F +LL G I D+ L I GI T Sbjct: 162 RVAFQSEGILLALPSGGYLLAERDGGGIGKDLAQMEGLEAALPEAWAWKDIQAGIA-WVT 220 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG- 217 P A M+L+ ++ KGCY GQE+V+R Q+ +++R ++ LP Sbjct: 221 QATQEQFVPQMANMELIGAVNFKKGCYPGQEIVARSQYLGKMKRRMFKVSFDAALPVGAK 280 Query: 218 --SPILTDDIEIGTLG--VVVGKKA---LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 SP L D IG L VG+ A LA+A+ + I T+ R++ +P Sbjct: 281 LYSPQLPDQ-SIGMLASECRVGENAYLGLAVAQSQTWEAGIFADEGHTIALRRLELPYP 338 >gi|152978102|ref|YP_001343731.1| aminomethyltransferase [Actinobacillus succinogenes 130Z] gi|150839825|gb|ABR73796.1| aminomethyltransferase [Actinobacillus succinogenes 130Z] Length = 273 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 23/225 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + I+V G A +LQ +TADV L + +A P+GK+ F + ++ E Sbjct: 5 IELSQYTLIRVEGDDAESYLQGQLTADVTALAAGDSTFTAHCDPKGKMSAVFRLIRLSEK 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVV--LSWNQEHTFSNSS-FID 117 F I + +D+L Y + S V E +P+ G++ + F+N + I+ Sbjct: 65 RFYALIRTCLLPAALDQLKKYAVFSKVAFTQEEAEPV-GIIGETELPVQAKFNNRAILIN 123 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 + ++A W +DI+ + + +F+P + L + Sbjct: 124 PQSAVAFNADSALWD-----LADIQQGYPILTEQS----QFEFIPQAL----NLQAIEQA 170 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPI 220 +S KGCYIGQE V+R ++R KR M + TD +P G I Sbjct: 171 VSFHKGCYIGQETVARAKYRG-ANKRAMYVFKAATDSIPECGGEI 214 >gi|298368398|ref|ZP_06979716.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str. F0314] gi|298282401|gb|EFI23888.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str. F0314] Length = 300 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 31/242 (12%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + ++V G+ F+ ++ D+ L A + TP+G++L L+ D +L + Sbjct: 23 AIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRVLANMLVLNRGSD-LLLVM 81 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-HTFSNSSF---IDERFSIA 123 ++++ +L + LR+ V+ E P VL N E H + S E + Sbjct: 82 AADLTEAIVKRLRMFVLRAKVVFEPLPDYAAAAVLDENTEAHAAAEPSLSFPAAEENGVW 141 Query: 124 DVLLHRTW----GHNEKI------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 V L T G E++ A + HE+R + + T A+ Sbjct: 142 TVSLPHTGRLKIGEAERLPEHDAAAENAWNLHEIRSGYAWISAATK--------ETAVAQ 193 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +LN G+ KGCY GQE+++R Q+R +++ +++G L +G +L + E G Sbjct: 194 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-GSLEAAGIAVLENGAEAG 252 Query: 229 TL 230 + Sbjct: 253 QI 254 >gi|237746054|ref|ZP_04576534.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes HOxBLS] gi|229377405|gb|EEO27496.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes HOxBLS] Length = 337 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 52/283 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + + G A+ F+ ++ D+L L AR +A TPQG++L F + K E Sbjct: 20 AVLLKQTGLLALEGDDAVSFIHGQLSNDILYLDAASARLAAYCTPQGRMLALFHVWKAEG 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE----IQPINGV-------VLS-WNQEHTF 110 +++ + R +L +L Y LR+ V + Q I GV VLS W T Sbjct: 80 RIWLM-LPRDILPALQKRLQMYVLRAKVKLADESGKQAILGVGGRRAGAVLSRWF--STL 136 Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRI 149 + F + + F LL +++ S D ++ I Sbjct: 137 PSEPFGKVENGMGVLVRVGDAFGAPRYLLTVPLARLQEVESALSAELAMCDENSWALGDI 196 Query: 150 NHGIVD---PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ P D F+P + ++ G+S KGCY GQEV++R Q+R +R+R Sbjct: 197 EAGVPQITLPVQDRFIPQMVN-----LEQTGGLSFKKGCYPGQEVIARSQYRGTVRRR-- 249 Query: 206 IITGTDDLPPSGSPILTDDIEIG-----TLGVVVGKKALAIAR 243 + +LP SP + ++ G G V G +A R Sbjct: 250 MFHAYMELPEGKSPAIDLNMASGADLFDAAGEVCGTLVMAARR 292 >gi|190573775|ref|YP_001971620.1| putative aminomethyl transferase [Stenotrophomonas maltophilia K279a] gi|190011697|emb|CAQ45316.1| putative aminomethyl transferase [Stenotrophomonas maltophilia K279a] Length = 291 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 19/269 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + G A F A ++DV LP + SA L+ +G+ L F + ++ +D Sbjct: 15 LPGHQLLSLQGPDAAVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLADDHL 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF 120 +L + D++ +L + R V + ++ ++ S ++ Sbjct: 75 MLVLADGDADAIASQLQRFVFRRKVKVLVRDDLAAAGAFTAPEAASGAAIAQAAGDGWEL 134 Query: 121 SIADVLLHRTW--GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIF-PHD 169 + L RT G + A+ +T + + + +G+ P + ++ P Sbjct: 135 DLGSDALPRTLRIGAADAFAAGSETDEAAFALAWRQADLRYGL--PRLEEGQREVWTPQQ 192 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 +D LNG S+ KGCY GQE+V+R H KR + + T +G + D +GT Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAAPAQAGDGVQQDGAALGT 251 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALT 258 + V G ALA+ ++ D ++ G A+ Sbjct: 252 IACVAGDLALAVLPLEAGDADLQVGDAIA 280 >gi|264677744|ref|YP_003277650.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni CNB-2] gi|262208256|gb|ACY32354.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni CNB-2] Length = 318 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 23/254 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ ++ D Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRLSADEI 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSF--IDER 119 +L DRS + +L + LR+ + + G+ ++ N++ + ++ Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALKQQ 134 Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165 + L+ G+ + + D+ + E + G+ + + + + Sbjct: 135 GDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+ Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251 Query: 226 EIGTLGVVVGKKAL 239 E T VV A+ Sbjct: 252 EQATGTVVQAAAAV 265 >gi|294878109|ref|XP_002768268.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239870504|gb|EER00986.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 283 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 36/257 (14%) Query: 39 ARGSAILTPQGKILLYFLI----------------SKIEEDTFILEIDRSKRDSLIDKLL 82 A + L+P+G++L L+ E++ ++++D D+++ L Sbjct: 5 AAAAVFLSPKGRVLFDCLMYSGVSLKPDTSKGIVSDDKGEESLVVDVDEGVLDNVM--RL 62 Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-----IDERFSIADVLLHRTWGHNEKI 137 F + R ++ + I+ ++ + + W + + + E + D+ L ++ Sbjct: 63 FIRHRVHLPLNIEKLDNLGVYWTPSKSQNGCDGDTEVPVYEDPRVKDLGLRAILPKSDID 122 Query: 138 ASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 A + Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R Sbjct: 123 AESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASK 182 Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHA 250 + +RKR M I G D+ SG+ I+ D +IG + + + L IA+I HA Sbjct: 183 KLAVRKRLFGMRIDGDVDV-ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA 237 Query: 251 IKKGMALTVHGVRVKAS 267 KGM + V+A+ Sbjct: 238 -PKGMQMNTKQAMVEAT 253 >gi|114777736|ref|ZP_01452696.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus ferrooxydans PV-1] gi|114551952|gb|EAU54486.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus ferrooxydans PV-1] Length = 318 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 35/253 (13%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N S +K G + +LQ IT D+ L A +A+LTPQGK + I + D IL Sbjct: 27 NWSVLKASGPTVRDYLQGQITQDMNRLSADCAIHTALLTPQGKAVTELYIIEGNNDELIL 86 Query: 68 EIDRSKRDSLIDKL----LFYKLRSNVI--IEIQPINGVVLSWNQEHTFS---------N 112 S + + +L L +LR V+ + I + G + +Q +F+ Sbjct: 87 LTPASYATATVARLRQFALGQELRIGVVEALAICSLQGT-HAHSQLESFALPEPDEMWLA 145 Query: 113 SSFIDERFSIADVLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTD 159 +S E A V+ H G+ + + + + +RI G D + Sbjct: 146 TSRNPETDCFAIVMPHHPRGYWVVTAATSIRAVVSRQPEVEQNAFEAMRIIRGFPDFGIE 205 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSG 217 + + I P +A + +G+S KGCY+GQEV SR+ R I+K+ + + G D P Sbjct: 206 W-DAAIHPLNANLVEFDGVSFEKGCYVGQEVTSRMHWRGGIKKKLYRVSVDGRPDTLP-- 262 Query: 218 SPILTDDIEIGTL 230 PI T + IG L Sbjct: 263 CPIRT-SVNIGEL 274 >gi|288575997|ref|ZP_05977979.2| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996] gi|288566522|gb|EFC88082.1| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996] Length = 285 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 27/240 (11%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S I+V G+ FL ++ D+ LP A + TP+G++L ++ ED +L + Sbjct: 9 SVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRVLANMIVLNRGED-LLLVM 67 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFIDE--- 118 +S++ +L + LR+ V P VV ++ S + +D Sbjct: 68 AADLAESIVKRLRMFVLRAKVEFTPLPDFAVVGMLDESCHATPPDSPNLSFEALLDNGVY 127 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R I +V + + A + HE+R + + T T Sbjct: 128 TIPLPHKGRLKIGEVAQLPEY---DAQAENAWNLHEIRSGYPWISAATK---ETAVAQML 181 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ G+ KGCY GQE+++R Q+R +++ +++G D L +G ++++D E G + Sbjct: 182 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGVGVVSEDAEAGQI 240 >gi|194289602|ref|YP_002005509.1| aminomethyl transferase [Cupriavidus taiwanensis LMG 19424] gi|193223437|emb|CAQ69442.1| putative aminomethyl transferase [Cupriavidus taiwanensis LMG 19424] Length = 341 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 49/290 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G A FL +T V L AR + +P+G++L FL+ + + D +L++ Sbjct: 31 GLVRVAGDDAASFLHTQLTNAVDDLAPGTARLAGYCSPKGRLLATFLMWR-DADGIVLQL 89 Query: 70 DRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV----LSWNQEHTFSNSSFIDERFSIA- 123 + ++ +L + LR+ + +I P + ++ +Q + + F++A Sbjct: 90 SAEIQAAVQKRLSMFVLRAKAKLSDITPAHAILGVAGAGASQALGAAGLPAPEAPFAVAG 149 Query: 124 ----------DVLLHRTWG------HNEKIASDIKT---------YHELRINHG----IV 154 D W + + + + + L + G + Sbjct: 150 ADGVTVIRLPDSAGQPRWQLVLPAERADAVRAALSATLTGAAPALWDWLEVQSGLPRIVA 209 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 F+P I +L+ G++ KGCY GQEVV+R Q+R +++R ++ G ++P Sbjct: 210 ATQEQFVPQMIN-----FELVGGVNFRKGCYPGQEVVARSQYRGTLKRRMWLVQGEGEVP 264 Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256 + I + G++V G LA +ID A++ G A Sbjct: 265 APAAEIYRPEDPGQPCGMIVNAAPAPDGGWAGLAELKIDAAGSALRLGSA 314 >gi|30249485|ref|NP_841555.1| glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas europaea ATCC 19718] gi|30138848|emb|CAD85425.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas europaea ATCC 19718] Length = 348 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 44/234 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+ G+ A FLQ ++ DV ++ A TP+G++L FL+ + ++++ Sbjct: 43 LSHFGLIRFSGEDAQNFLQGQLSCDVRSVDSTQASHGGYCTPKGRLLGSFLLWQDSDNSY 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE----------------------------IQPI 97 ++++ + +++ +L + LR+ V I+ I P Sbjct: 103 LMQLPAERVETITRRLKMFVLRAKVSIQDNTDDLIRIGIAGKNALLSLQNMLPDTTISPA 162 Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT--WGHNEKIA--SDIKTYHELRINHGI 153 V S +S + RF I + W K A + + L I GI Sbjct: 163 PLAVTSIPDGQIICHS---ENRFEIMTTSIQAPSLWEQLNKQAHCAGAAIWDWLEIREGI 219 Query: 154 V----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I +D++ G+S KGCY GQE+V+R ++ +++R Sbjct: 220 PAIFNATQEQFIPQMIN-----LDIIGGVSFKKGCYPGQEIVARTEYLGKVKRR 268 >gi|145509709|ref|XP_001440793.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408021|emb|CAK73396.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 36/277 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N+S + + G+ LQ I T D+ + ++ + L G+++L L+ + D Sbjct: 11 LDNRSIVSIKGREVCEILQGITTNDLRQIQQ--SQSTLFLNTNGRVILIVLLWQYCNDEI 68 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII----------------------EIQPINGVVLS 103 ++ID+ + SLI+ + + +R V I E + I Sbjct: 69 WMDIDKEIKSSLINHIKKFLIRKKVQITDYEDQLHVFQVYGPQVKLSNKEGEAITDPNND 128 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTD 159 + E + N +D R S + + N+ D+ + R+ I + Sbjct: 129 LSDEGDYRNLVAVDPRSSSIGIRMVTNEMPDLKENDIQVQDLAHFEISRLTEAIFEGKE- 187 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSG 217 P D N I+LTKGCY+GQE+ +R H +IRKR P + ++ Sbjct: 188 --VVNKIPFQVNFDFWNSINLTKGCYVGQELTARTYHTGVIRKRLLPFKVVSNNNTTNLE 245 Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 I+ + + E+G VV IA ++ +D ++K Sbjct: 246 DQIINNGEQEVGK--VVKSSNNFGIANVNYLDIDLEK 280 >gi|257453607|ref|ZP_05618897.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60] gi|257449065|gb|EEV24018.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60] Length = 242 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 28/237 (11%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A FLQ +T +V L + + +AI +G++ L I KI +D + + I + Sbjct: 9 ITGADAQKFLQGQVTCNVTKLSDQF-QATAISNLKGRVALGIWIKKIADDAYQIVISQDC 67 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133 D + Y S + + P + + N +FS S E + DV Sbjct: 68 ADEFAKHIKKYAAFSKLTLSA-PRDIFAVIDNGVSSFSES----ENGTDTDV-------- 114 Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 D K + + I N+ IV P + + G+ KGCY+GQE+ Sbjct: 115 ------DRKAWQKASIATGNYWIVKTTAGLWQ----PQELRLHQQGGVDYDKGCYLGQEI 164 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 ++R+ + + + GT D+P +G I + D+ + ++ G +AL +AR D + Sbjct: 165 IARLYFKASPKAWLHRVAGTGDIPNAGEKIGSVDV-VNSIATDTGFEALVVARPDDI 220 >gi|114561743|ref|YP_749256.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella frigidimarina NCIMB 400] gi|114333036|gb|ABI70418.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella frigidimarina NCIMB 400] Length = 320 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I++ G+ F+ +T D+ +L + A P+GK+L F I + F Sbjct: 24 LTHMGLIEITGEQGRSFIHGQVTTDITSLGTNEWKWGAHCDPKGKMLASFRTFSIGDSLF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTFSNSSFID---- 117 +L + +S + +L Y + S E+ ++ + ++ +Q F+ +F D Sbjct: 84 ML-LPKSTLSLDLPQLQKYAVFSKA--ELADVSNNYQIIGIAGSQAQAFATENFGDVSQA 140 Query: 118 -------------ERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 ERF I + + + D + L I G PN D Sbjct: 141 INLVEQGVIIRDGERFIAIINNAAAETIISQSGQTLIDASAWQALEIKAGY--PNIDAAH 198 Query: 163 STIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 S + + +NGIS TKGCY+GQE ++R+++R ++ II+GT Sbjct: 199 SGQYVAQMCNLQAINGISFTKGCYMGQETIARMKYRGGNKRALYIISGT 247 >gi|85059975|ref|YP_455677.1| putative global regulator [Sodalis glossinidius str. 'morsitans'] gi|118577998|sp|Q2NRF3|YGFZ_SODGM RecName: Full=tRNA-modifying protein ygfZ gi|84780495|dbj|BAE75272.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 328 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L + + + + G + +LQ +T DV +L +A +GK+ + + + Sbjct: 23 ISLEDWALVTLNGADTVKYLQGQLTCDVASLDADRFSFAAHCDAKGKMFSHLCVFHHHDG 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PING 99 +E RS RDS + +L Y + S I P Sbjct: 83 MAFIE-RRSVRDSQLAELKKYAVFSKTTITADDDAVLLGVAGFQAQAALGGLFTSVPNAA 141 Query: 100 VVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 ++ +Q+ T S RF ++ D L H+ G + +D + + L I G Sbjct: 142 HPVAHHQDTTLLYFSLPAPRFLLITTPAVRDALQHKLEGQAQ--LNDSQQWLALDIEAGY 199 Query: 154 VDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P D T F P A + L+GIS KGCY GQE+V+R ++R ++ + G Sbjct: 200 --PVIDSANGTQFIPQAANVQALDGISFNKGCYAGQEMVARAKYRGANKRALYWLAGKAS 257 Query: 213 LPPSGSPILTDDIEI 227 PP+ DD+E+ Sbjct: 258 HPPAAG----DDLEL 268 >gi|269467784|gb|EEZ79542.1| aminomethyltransferase [uncultured SUP05 cluster bacterium] Length = 265 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 33/255 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+S +K+ G FLQ + D+ L + +A QGKI+ + K +D F Sbjct: 5 LTNRSLLKLSGGDTQSFLQGQFSNDIDALEGGAVQLNAYCQHQGKIIALLWVIK-RDDDF 63 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + +L +K+ S+V I N V+ + F + ++++ S+A V Sbjct: 64 YLSFPSDLAELVTKRLTMFKMMSDVTI-TDVSNEVIQLGVIDEEFDGAFKLNDQQSVALV 122 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLN----- 176 H E SD + + I +G+ ++ + F+P LLN Sbjct: 123 DKH------EFDLSDESNWEKACIENGMAEVYLNTSEQFVPQ----------LLNLDINE 166 Query: 177 -GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV- 234 G+S TKGCY GQEVV+R+ + ++R + T D+ ++ G+VV Sbjct: 167 VGVSFTKGCYPGQEVVARLHYLGKSKRRMRVFTCDADVNIGDELVVAGSKSAKASGIVVR 226 Query: 235 ----GKKALAIARID 245 K+L +A ++ Sbjct: 227 CVKLDSKSLCLATVE 241 >gi|251793343|ref|YP_003008071.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus NJ8700] gi|247534738|gb|ACS97984.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus NJ8700] Length = 295 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 23/229 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 L + + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + + Sbjct: 17 LEHYTLIEIAGTDAEKYLQGQLTCDV----TKLAGGESTLTAHCDPKGKMSALFRLIRQD 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT--FSNSSFID 117 E TF + + + S +D+L Y + S V + I G + E FS +D Sbjct: 73 EQTFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRVD 132 Query: 118 ERFSIAD-VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALM 172 + +LLH T E + + + L I G+ +F+P + L Sbjct: 133 VKTQQPRIILLHPTRLALEPTV-EAEAWDLLDIQDGVPSLAAATQLEFIPQAL----NLQ 187 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 + IS KGCYIGQE V+R ++R ++ I T LP GS + Sbjct: 188 SIERAISFQKGCYIGQETVARAKYRGANKRALFIFAARTQSLPDIGSAL 236 >gi|326794158|ref|YP_004311978.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1] gi|326544922|gb|ADZ90142.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1] Length = 305 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 29/249 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ FI V GK A FLQ +TADV + + A TP+G+++ FLI ++ ++ + Sbjct: 19 LTELGFIHVEGKDAQKFLQGQVTADVSKVTSGASSFGATCTPKGRVISNFLICQVADEQY 78 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQ-EHTFSNSSFIDERFS- 121 +L + SL++K L + + V + + + ++++ + N + ++ Sbjct: 79 LLTL----HSSLVEKTLAHFKKYAVFFKATLTDASDTYAAFSEYARSLDNDETPQDEYAL 134 Query: 122 ------IADVL---LHRTW----------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 I DVL L+ T+ H + A+ + H + I+ + P + Sbjct: 135 LHPTQKIGDVLSIQLNNTYFSETLSIVPAEHLQDKATTNEEAHRV-ISLLTLRPFIELKD 193 Query: 163 S-TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 S I P M IS TKGCY GQE+V+R+++R +K +++ +L Sbjct: 194 SEEILPQWFNMQRNGSISFTKGCYTGQEIVARMKYRGKSKKHMALLSSESELTTGMDVAN 253 Query: 222 TDDIEIGTL 230 + IGTL Sbjct: 254 QEGKVIGTL 262 >gi|254481212|ref|ZP_05094457.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148] gi|214038375|gb|EEB79037.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148] Length = 298 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 35/276 (12%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + FLQ +T D + + A A PQG+++ F+++++ E+ + L + + Sbjct: 5 GPDTLSFLQGQVTCDTREVSSQQAVVGAYCNPQGRMVCDFMLAQLGENHYALRLKANTLA 64 Query: 76 SLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHT--FSNSSFI--DERFSIAD------ 124 + Y + S +E + + V+ W E +N+ F + ++ A Sbjct: 65 TAAKTFSKYIVFSKADLEAERQDWQVIGCWGNEAAKDLANAGFAIPEAKYQAATGDGYVV 124 Query: 125 ----------VLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTIF 166 LL T H+E++ S + L+I GI + + Sbjct: 125 VQMDDAGTQFELLIDTQNHSERLNSLGQNLNSGKESQWQALQIRAGIGRIEQANIEE-LL 183 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224 P D+ +S TKGCY GQE+V+R+ +R ++R + + D+ P +G+ + + Sbjct: 184 PQMLNYDVTGHVSFTKGCYTGQEIVARLHYRGKAKRR-LYLGQFDETESPGAGAALFSTS 242 Query: 225 IE--IGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258 E +G L I + + +++G+ LT Sbjct: 243 AEQSVGVLVNAASADGGNICLLCATEKGVEQGLRLT 278 >gi|319427571|gb|ADV55645.1| folate-binding protein YgfZ [Shewanella putrefaciens 200] Length = 318 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L + + + + +L Y + S + +L E F+ + F D+ Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137 Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163 T N I D +T + L H + D PN + Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAEHTVFDATAWQALEIAAGYPNLAASHA 197 Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|90021900|ref|YP_527727.1| TonB-dependent receptor [Saccharophagus degradans 2-40] gi|89951500|gb|ABD81515.1| glycine cleavage T protein (aminomethyl transferase) [Saccharophagus degradans 2-40] Length = 322 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 24/236 (10%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 I+V G A FLQ T D ++ A +G+++ F +K+ + F L Sbjct: 32 LIEVKGPDAEKFLQGQCTCDFKSIANGKFSLGAHCNVKGRMVSSFTAAKLGPEHFGLRTH 91 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEHTFSN-------SSFIDERF 120 +S + + L Y + S V +EI V +N E F N S+ +++ Sbjct: 92 KSNAEKALATLKKYAVFSKVSLEISSSLAAVAVFNTQANEVPFFNATAEVGCSTALEQGA 151 Query: 121 SIADV-LLHRTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDAL 171 +A + W E I ++ + I G+ + D I P + Sbjct: 152 CLAHTNSMQELWLARENIQQLLEQLPVAAPHYWTAYNIAQGVAEVTADSTEQLI-PQEIN 210 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRK---RPMIITGTDDLPPSGSPILTDD 224 + LL G+S KGCY GQE+V+R+ ++ ++K R + T P +G+ ++ ++ Sbjct: 211 LQLLGGVSFNKGCYTGQEIVARMHYKATLKKHMYRAQLAPST-SAPATGTALINEE 265 >gi|120597634|ref|YP_962208.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. W3-18-1] gi|120557727|gb|ABM23654.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. W3-18-1] Length = 318 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L + + + + +L Y + S + +L E F+ + F D+ Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137 Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163 T N I D +T + L H + D PN + Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQVLEIAAGYPNLAASHA 197 Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|146294227|ref|YP_001184651.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella putrefaciens CN-32] gi|145565917|gb|ABP76852.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella putrefaciens CN-32] Length = 318 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L + + + + +L Y + S + +L E F+ + F D+ Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137 Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163 T N I D +T + L H + D PN + Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQALEIAAGYPNLAASHA 197 Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|302793815|ref|XP_002978672.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii] gi|300153481|gb|EFJ20119.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii] Length = 404 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/355 (23%), Positives = 132/355 (37%), Gaps = 94/355 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----------PYKIARG-------SAILTP 47 L +++ + G FLQ + T DVL L P G + IL P Sbjct: 48 LKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGILNP 107 Query: 48 QGKILL-YFLISKIEED-----------------TFILEIDRSKRDSLIDKLLFYKLRSN 89 QG+ L FL ++E + ++D + D LI L Y LRS Sbjct: 108 QGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYILRSK 167 Query: 90 VIIE--------IQPINGVV------------LSWNQEHTFSNSS-----------FIDE 118 V IE Q G + + W S ++ F D Sbjct: 168 VNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGKGWRWFKDP 227 Query: 119 RFSIADVLLHR---TWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R D L R + G + D + Y R+ G+ + + P + Sbjct: 228 RL---DALGFRGVFSSGITPPLVEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM----IITGTDDLPPS---GSPILTD 223 M LN IS KGCY+GQE+++R +R IRKR M ++ +++ G+ I+ Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIMDG 344 Query: 224 DI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV----HGVRVKASFPHWY 272 + ++G++ +G + LA+ R+ + A K + L G VK P W+ Sbjct: 345 ETGKKVGSVVTALGSRGLAMVRL---EAAAKDRLKLQSVDGGGGAFVKPIRPKWW 396 >gi|302879423|ref|YP_003847987.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2] gi|302582212|gb|ADL56223.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2] Length = 311 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 41/229 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + ++V G A FLQ +++ D+ + A+ S+ T +G++L FLI + + D + Sbjct: 17 LSQLATLRVSGSDAHSFLQNLLSNDIREVSATQAQYSSFNTAKGRMLANFLIWR-DADDY 75 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV------------------------IIEIQPINGVV 101 +L++ + D+L KL Y LR+ V +E+ P+ GV+ Sbjct: 76 LLQLPETLADALRKKLGMYVLRAQVKITDARHEVVSLGLSGCHPALPATCLEL-PVMGVI 134 Query: 102 LSWNQEHTFSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 S E D RF + +L ++ SD + +R ++ P Sbjct: 135 ES--AELACRIIKIGDARFMLNCTPEQQPMLSAAL-DSQMTGSDTWDWLNIRAGTPVILP 191 Query: 157 NT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 T F+P + DL+ GI+ KGCY GQE+V+R+ + ++R Sbjct: 192 ATQEQFVPQMVN-----FDLIGGINFKKGCYPGQEIVARMHYLGKPKRR 235 >gi|302805709|ref|XP_002984605.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii] gi|300147587|gb|EFJ14250.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii] Length = 404 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 80/358 (22%), Positives = 133/358 (37%), Gaps = 98/358 (27%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-----------PYKIARG-------SAILT 46 +L +++ + G FLQ + T DVL L P G + IL Sbjct: 47 HLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGILN 106 Query: 47 PQGKILL-YFLISKIEED-----------------TFILEIDRSKRDSLIDKLLFYKLRS 88 PQG+ L FL ++E + ++D + D LI L Y LRS Sbjct: 107 PQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYILRS 166 Query: 89 NVIIE--------IQPINGVV------------LSWNQEHTFSNSS-----------FID 117 V IE Q G + + W S ++ F D Sbjct: 167 KVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGNGWRWFKD 226 Query: 118 ERFSIADVLLHR---TWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 R D L R + G + D + Y R+ G+ + + P + Sbjct: 227 PRL---DALGFRGVFSSGITPPLIEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLE 283 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM----IITGTDDLPPS---GSPILT 222 M LN IS KGCY+GQE+++R +R IRKR M ++ +++ G+ I+ Sbjct: 284 YNMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIVD 343 Query: 223 DDI--EIGTLGVVVGKKALAIARIDKVD------HAIKKGMALTVHGVRVKASFPHWY 272 + ++G++ +G + LA+ R++ ++ G +V +R P W+ Sbjct: 344 GETGKKVGSVITALGSRGLAMVRLEAAAKDRLKLQSVDGGCGASVKPIR-----PKWW 396 >gi|71032799|ref|XP_766041.1| hypothetical protein [Theileria parva strain Muguga] gi|68352998|gb|EAN33758.1| hypothetical protein TP01_0521 [Theileria parva] Length = 348 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 37/243 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+ I++ G+ + FLQ +I++D+ + R + L+ QG I+ LI E D + Sbjct: 4 LNNRVIIRLFGQDSFNFLQGLISSDLRLVKADETRPALFLSAQGHIVAESLIFTHEGDYY 63 Query: 66 I--LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------HTFSNSSF 115 + L+I+ +K ++I+K KL S V + V + + E T N + Sbjct: 64 LDSLKINHNKILNIINK---RKLASKVQTDTTESEVYVSTLDSEFYTHFKPGKTKENKNL 120 Query: 116 IDERFSIADVLLHRTW------------------GHN--EKIASDIKTYHELRI-NHGIV 154 I + + HR + G+N +K ++ Y +L + N+ ++ Sbjct: 121 IKLLDTRNRLFGHRYYWISNNTVCGLDQVESNKLGNNNLDKNQENLSVYDKLLLMNNYLM 180 Query: 155 D--PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D N D F + P D + N IS KGCY+GQE+++RI ++ +I K + I +D Sbjct: 181 DLMMNEDGFEKYKLMPFDLNLQNFNYISSDKGCYVGQEIINRINNKVLINKYKLYIAVSD 240 Query: 212 DLP 214 DL Sbjct: 241 DLK 243 >gi|255954107|ref|XP_002567806.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589517|emb|CAP95663.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255] Length = 438 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 46/244 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLI-- 57 L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I Sbjct: 42 LTNRGLISITGIDSTTFLQGLITQNMLVANDPNRSIRRTGAYTAFLNSQGRVLNDAFIYP 101 Query: 58 -----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEH-- 108 ++ E +++EID+++ L+ L +KLR+ + + + + SW Sbjct: 102 LPGAEAQGAESGWLVEIDKNQVPVLLKHLKKHKLRAKLKLRALEEGERTIWSSWKNHAEP 161 Query: 109 ----TFSNSSFIDERFS----IADVLLHRTWGHNEKI---ASD----------------- 140 +S S FS IA + R G +I SD Sbjct: 162 QRWAAYSLESESPSPFSPTSEIAGCIDTRAPGFGSRIITPGSDGLRTYFPDEAQVAGPEV 221 Query: 141 -IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + +Y RI HG+ + + + + P MD+ GI KGCY+GQE+ R HR + Sbjct: 222 PLDSYTVRRILHGVAEGQAEVISGSALPLQCNMDMARGIDFRKGCYVGQELTIRTHHRGV 281 Query: 200 IRKR 203 RKR Sbjct: 282 TRKR 285 >gi|114320486|ref|YP_742169.1| glycine cleavage T protein (aminomethyl transferase) [Alkalilimnicola ehrlichii MLHE-1] gi|114226880|gb|ABI56679.1| glycine cleavage T protein (aminomethyl transferase) [Alkalilimnicola ehrlichii MLHE-1] Length = 328 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I V G A FL + +T D+ +P R + P+G++L F + + + +F Sbjct: 27 LPEAGVIAVEGPDATTFLHSQLTHDIEGMPEGSWRLAGWCNPKGRLLALFRVVRDGDQSF 86 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------NSSFIDER 119 L ++ +L + LR+ V ++ + ++L E N++ + Sbjct: 87 RLLCPGELVTGVMRRLQMFILRARVTLDDRSGEQLLLGLYGEEALDAATRELNTTLPEPS 146 Query: 120 FSI-------------------ADVLLHRTW-GHNEKIASDIKTYHELRINHG---IVDP 156 + + R W + D + + L+I G I Sbjct: 147 GTTHTHGATLLALAADRALLIAGPDRMKRLWLALHHLPVGDPQHWRLLQIRAGEPEIFQD 206 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + D P A +D+++G+S KGCY GQEVV+R+ + ++KR I+GT LPP Sbjct: 207 SQDLF----IPQMANLDVIDGLSFRKGCYPGQEVVARMHYLGRLKKRMFPISGT-GLPPR 261 Query: 217 GSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMAL 257 + D + LG VV G+ + A + +DHA + G AL Sbjct: 262 PGTEVRDPADK-RLGQVVVAESDGEDSFAGLAVLPLDHA-EYGAAL 305 >gi|302331392|gb|ADL21586.1| Glycine cleavage T protein [Corynebacterium pseudotuberculosis 1002] Length = 362 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 56/270 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-----LTPQGKIL--LYFLIS 58 LS++ IKV G A FL +++ + +P ++A + L QG+IL + L + Sbjct: 48 LSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDILAA 107 Query: 59 KIEEDTFILEIDRSKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSN 112 + ED L + R++ + + + +++F+ ++++P + VL+ H Sbjct: 108 QDAEDALYLHLPRAQYETFFAFLTRMIFWSQ-----VKVEPADLAVLTLMGAGVPHFPLP 162 Query: 113 SS-----------FIDERFSIADVLLHRTWGHNEKIASDIK------------TYHELRI 149 SS F R D+L+HR+ N A D+ T +R Sbjct: 163 SSDAVVAAAQVPGFTTHRL---DILVHRSEIMN--TAKDLTLAGAIPTGLMAFTAERVRS 217 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIIT 208 +V + D PH+A + N + L KGCY GQE V+R++ N+ R R ++I Sbjct: 218 QQPVVSLDLDH---KSIPHEAPQLIANAVHLNKGCYRGQETVARVE--NLGRPPRALVIA 272 Query: 209 GTDDLPPS----GSPILTDDIEIGTLGVVV 234 D P+ G PI++ +G LG VV Sbjct: 273 LLDGSAPTTPKPGDPIVSGGRSVGKLGTVV 302 >gi|255019683|ref|ZP_05291762.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Acidithiobacillus caldus ATCC 51756] gi|254970906|gb|EET28389.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Acidithiobacillus caldus ATCC 51756] Length = 321 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 53/290 (18%) Query: 6 LSNQSFIKVC-GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS + I C G A FLQ + D+ +LP + S+ T +G+++ F + + ++D Sbjct: 10 LSEELGILHCHGADAEKFLQGQFSNDLTSLPSPGGQWSSYSTAKGRMIANFYLLR-DDDG 68 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHT-------------- 109 F L + R +++ ++L ++L + V IE +L+ W T Sbjct: 69 FWLLLSRDLTETVAERLRKFRLMAKVDIEDAGTTHALLALWGAGATEVLGNPGGEDVPAT 128 Query: 110 ----------------FSNSSFI-----DERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 + SF+ D+ S + L R G +E +D + +R Sbjct: 129 PHAVSVRNGARIVRLPWPEPSFLILASGDDIASWGEQL--RARGAHEATGADWR-LGSIR 185 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 ++ T + P + +++L GIS TKGCY GQE+V+R + ++ + + Sbjct: 186 AGIAFINAATT---EQVIPQELNLEVLGGISFTKGCYPGQEIVARSHYLGRLKNQCYRLR 242 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK--------KALAIARIDKVDHA 250 L P G I + + ++G+V+ +ALA+ R + +H+ Sbjct: 243 AHAPLAP-GRAIFSAAMGEQSIGLVIQAAAVGDGSFEALAVVRAEDAEHS 291 >gi|315635020|ref|ZP_07890301.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393] gi|315476282|gb|EFU67033.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393] Length = 304 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 L++ S I++ G A +LQ +T DV K+A G + LT P+GK+ F + + + Sbjct: 26 LTHYSLIEIVGTDAEKYLQGQLTCDVT----KLAVGESTLTAHCDPKGKMSALFRLIRQD 81 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDER 119 E TF + + + S +D+L Y + S V + I G + E S+ I R Sbjct: 82 EQTFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQI--R 139 Query: 120 FSIAD-----VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170 I +LL+ T+ E + + + L I G+ +F+P + Sbjct: 140 IDINGQQPRVILLNPTYLALEPTV-EAEAWDLLDIQDGVPGLAAATQLEFIPQAL----N 194 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 L + IS KGCYIGQE V+R ++R ++ I T LP GS + Sbjct: 195 LQSVEQAISFHKGCYIGQETVARAKYRGANKRALFIFAARTQSLPEIGSAL 245 >gi|254569948|ref|XP_002492084.1| Mitochondrial matrix protein [Pichia pastoris GS115] gi|238031881|emb|CAY69804.1| Mitochondrial matrix protein [Pichia pastoris GS115] gi|328351426|emb|CCA37825.1| Putative transferase CAF17, mitochondrial [Pichia pastoris CBS 7435] Length = 476 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 42/71 (59%) Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +AS+ Y RI +GIV+P + ++ P + +D NGIS KGCY+GQE+ +R Sbjct: 274 MASNSSEYKLRRIINGIVEPADLDMEHSVLPFELNVDFTNGISFEKGCYVGQELTTRTYT 333 Query: 197 RNIIRKRPMII 207 IIRKR M I Sbjct: 334 TGIIRKRIMPI 344 >gi|300859136|ref|YP_003784119.1| hypothetical protein cpfrc_01719 [Corynebacterium pseudotuberculosis FRC41] gi|300686590|gb|ADK29512.1| hypothetical protein cpfrc_01719 [Corynebacterium pseudotuberculosis FRC41] gi|302206830|gb|ADL11172.1| tRNA-modifying protein ygfZ [Corynebacterium pseudotuberculosis C231] gi|308277082|gb|ADO26981.1| Glycine cleavage system T protein [Corynebacterium pseudotuberculosis I19] Length = 376 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 56/270 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-----LTPQGKIL--LYFLIS 58 LS++ IKV G A FL +++ + +P ++A + L QG+IL + L + Sbjct: 62 LSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDILAA 121 Query: 59 KIEEDTFILEIDRSKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSN 112 + ED L + R++ + + + +++F+ ++++P + VL+ H Sbjct: 122 QDAEDALYLHLPRAQYETFFAFLTRMIFWSQ-----VKVEPADLAVLTLMGAGVPHFPLP 176 Query: 113 SS-----------FIDERFSIADVLLHRTWGHNEKIASDIK------------TYHELRI 149 SS F R D+L+HR+ N A D+ T +R Sbjct: 177 SSDAVVAAAQVPGFTTHRL---DILVHRSEIMN--TAKDLTLAGAIPTGLMAFTAERVRS 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIIT 208 +V + D PH+A + N + L KGCY GQE V+R++ N+ R R ++I Sbjct: 232 QQPVVSLDLDH---KSIPHEAPQLIANAVHLNKGCYRGQETVARVE--NLGRPPRALVIA 286 Query: 209 GTDDLPPS----GSPILTDDIEIGTLGVVV 234 D P+ G PI++ +G LG VV Sbjct: 287 LLDGSAPTTPKPGDPIVSGGRSVGKLGTVV 316 >gi|328773851|gb|EGF83888.1| hypothetical protein BATDEDRAFT_36379 [Batrachochytrium dendrobatidis JAM81] Length = 366 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 78/331 (23%), Positives = 132/331 (39%), Gaps = 66/331 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIEED- 63 L N+ +++ G A FLQ ++T + ++P + +A L QG++L+ I + ++ Sbjct: 32 LKNRMVLRLEGSDAAIFLQGLVTNHITDSMPENSLKLAAFLNAQGRVLMDAFIYREPKNP 91 Query: 64 -----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +F++E + L L YKLR V +I I+ V W + + Sbjct: 92 ESTGPSFLVECADTVIPLLEKHLQRYKLRKQV--KITNISDSVDVWQIWGSLDRDQLKNS 149 Query: 119 RFSI-------ADVLLH-------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + AD+ + +T ++ Y RI GI + TDF Sbjct: 150 DGGMWCADPRNADMGMRGIALKTCQTLLPDQMKKVPFTDYVARRICLGIPEGPTDFFYEK 209 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT-DDLPPSGS--- 218 P ++ ++L+ G+ KGCY+GQE+ R H RKR P+ + D +P S S Sbjct: 210 SLPLESNLELIQGVDFQKGCYLGQELTIRTYHTGFTRKRIVPVQLYNEHDPVPKSLSLDT 269 Query: 219 ------PILTDDIEIGTLGV----------VVGKKA-------LAIARIDKVDHAIKKGM 255 P DI++G L VVGK LA+ R++ V ++ Sbjct: 270 SITMEHPPSQSDIKLGDLTSEETTLTRSKGVVGKYCGGLHNIGLALVRLESVVRPLENQS 329 Query: 256 ALT--------------VHGVRVKASFPHWY 272 L +G+R +A P W+ Sbjct: 330 MLGSSDLSSNEIKPLILANGMRARAFAPLWW 360 >gi|303257418|ref|ZP_07343431.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Burkholderiales bacterium 1_1_47] gi|331000631|ref|ZP_08324286.1| glycine cleavage T-protein barrel domain protein [Parasutterella excrementihominis YIT 11859] gi|302859775|gb|EFL82853.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Burkholderiales bacterium 1_1_47] gi|329570903|gb|EGG52611.1| glycine cleavage T-protein barrel domain protein [Parasutterella excrementihominis YIT 11859] Length = 304 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 F+ V G+ A FLQ ++T +V T+ AR +A QG+ LI +I + F + + Sbjct: 19 FVVVRGEDAENFLQGMLTQNVKTMGPTDARWTAACNHQGRTAATSLIVRIP-NGFGMLMP 77 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQP-------------INGVVLSWNQE--HTFSNSSF 115 +S +D+L + LRS V IEI P I+ + +E + S Sbjct: 78 KSIAQDEVDRLSKFILRSKVEIEILPEPITYFCSDDAKAIDRPCPALPREPMQAYVGDSV 137 Query: 116 IDERFSIADVL-LHRTWGHNEKIASD----IKTYHELRINHGIVDPNTDFL--PSTI--F 166 I R D +H + KI D IK ++ R+ +++ + P + Sbjct: 138 IVVRLPSNDAQGMHGKFVAIGKIPDDMYAPIKAHN--RLARSLMEEGIALIEKPEVLEWL 195 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P MDL+ GI+ KGCY GQE++S+ ++ +++R Sbjct: 196 PQALNMDLIGGIAFNKGCYTGQEIISKTENLGKVKRR 232 >gi|299529313|ref|ZP_07042752.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni S44] gi|298722691|gb|EFI63609.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni S44] Length = 318 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 23/254 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSADEI 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSF--IDER 119 +L DRS + +L + LR+ + + G+ ++ N++ + ++ Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALKQQ 134 Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165 + L+ G+ + + D+ + E + G+ + + + + Sbjct: 135 GDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+ Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251 Query: 226 EIGTLGVVVGKKAL 239 E T VV A+ Sbjct: 252 EQATGTVVQAAAAV 265 >gi|217972050|ref|YP_002356801.1| folate-binding protein YgfZ [Shewanella baltica OS223] gi|217497185|gb|ACK45378.1| folate-binding protein YgfZ [Shewanella baltica OS223] Length = 320 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 34/247 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 +L + + + + +L Y + S + +L E S F+ E F Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFVSEHFGDIHQ 139 Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160 AD +L+ +A D + L I G PN Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSG 217 S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L P SG Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISPESG 257 Query: 218 SPILTDD 224 I +D Sbjct: 258 LEIAMED 264 >gi|281209059|gb|EFA83234.1| putative mitochondrial transferase [Polysphondylium pallidum PN500] Length = 396 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 51/262 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKIL---LYFLI 57 L+++S +KV G A+ +Q + T ++ L P + + L+ G++L + F Sbjct: 17 LTSRSILKVSGPDAVKLVQGLTTNNMGRLVDSQAPSPTSLYTGFLSSTGRLLFDAVVFHQ 76 Query: 58 SKIE-----------------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------- 93 +E E +++D I+ L +YK+R+ IE Sbjct: 77 QNVEVISSSASRVAKSDGSSGEQQLFIDVDSEVASRAIEHLHYYKIRNKATIENVTEEFA 136 Query: 94 -IQPINGVVLSWNQEHTFSN------SSFIDERF----------SIADVLLHRTWGHNEK 136 ++ S + F + + +D R S + + + + + Sbjct: 137 LFSVLDKTYKSVRNDQLFEHLKQQKCTVMMDPRHDAMGLRILVPSSKNSMKNEVLSNYPE 196 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 D+ Y+ R+ +GI D+ + P + DLLNG+ KGCY+GQE+ SR + Sbjct: 197 EKEDV--YNLYRVQNGIPQGVKDYSYDKVIPLEYNFDLLNGVDFHKGCYLGQELTSRTHY 254 Query: 197 RNIIRKRPMIITGTDDLPPSGS 218 +IRKR + + D P S Sbjct: 255 TGLIRKRLFPVVMSSDSPKEHS 276 >gi|319793763|ref|YP_004155403.1| folate-binding protein ygfz [Variovorax paradoxus EPS] gi|315596226|gb|ADU37292.1| folate-binding protein YgfZ [Variovorax paradoxus EPS] Length = 308 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 26/221 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + ++ Sbjct: 12 LSHLGVIRAEGPDAASFLHGQLTQDFSLLGATEARLAALCTAKGRVIASFIGIRPQPESI 71 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEHTFS---NSSF 115 +L R + + +L Y LR+ + + + G L+ N + + Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATDQFALYGLAGTALTANGLDAATPPGKRTA 131 Query: 116 IDERFSI-----ADVLLHRTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 I + S+ AD + W K+ +D+ + E+R GIV T + Sbjct: 132 IGDDISVVSLYPADGVPRALWIAPAHHAAPAGPKLDADLWQWSEVR--SGIVTVTTPIIE 189 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + + P + + G++ KGCY GQE+V+R Q R +++R Sbjct: 190 AFV-PQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRR 229 >gi|114331277|ref|YP_747499.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas eutropha C91] gi|114308291|gb|ABI59534.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas eutropha C91] Length = 356 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 55/255 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI-SKIEEDT 64 LS+ I+ G+ FLQ ++ DV T A TP+G++L FL+ I + + Sbjct: 43 LSHLGLIRFSGEETQKFLQGQLSCDVHTTDSGKATYGGYCTPKGRLLSSFLLWQNISDYS 102 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFI------ 116 +++++ +++ +L + LR+ VII+ + + ++ HT ++ Sbjct: 103 YLMQLPAELTETIAKRLKMFVLRAKVIIQDHTEDCIRIGVAGKNAHTLLQNTLAGTVLPT 162 Query: 117 -----------------DERFSIADVLLH--RTWGHNEKIASDIKT-----YHELRINHG 152 + RF I H W E+++S + + L I G Sbjct: 163 QPLAITAIPDGQVICHSENRFEILISPAHALSLW---ERLSSQARCAGAAAWDWLEIQEG 219 Query: 153 IV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR----- 203 + F+P I +D + G++ KGCY GQE+V+R Q+ +++R Sbjct: 220 VPAIFKATQEQFIPQMIN-----LDAIGGVNFKKGCYPGQEIVARTQYLGKVKRRMYRAH 274 Query: 204 -----PMIITGTDDL 213 P+ IT D+L Sbjct: 275 LDSDSPLEITAGDNL 289 >gi|291295136|ref|YP_003506534.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279] gi|290470095|gb|ADD27514.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279] Length = 325 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 17/130 (13%) Query: 142 KTYHELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + +H R+ GI D LP + P +A ++ +S KGCY+GQE+++R++ R Sbjct: 201 QAWHIWRVERGIPD-----LPEALGELPQEAGLE--GRVSYKKGCYLGQEIMARLEARGN 253 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV--DHAIK 252 R + M + G +L PSG+ I + +G +G V G ALA+ R + D Sbjct: 254 TRYQLMGLLGQKEL-PSGAEIFREGKRVGRVGTAVESPRLGAIALALLRKELAPGDQVHV 312 Query: 253 KGMALTVHGV 262 +G + TV G+ Sbjct: 313 EGWSATVSGL 322 >gi|297538278|ref|YP_003674047.1| folate-binding protein YgfZ [Methylotenera sp. 301] gi|297257625|gb|ADI29470.1| folate-binding protein YgfZ [Methylotenera sp. 301] Length = 345 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 56/291 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEEDT 64 LS+ +++ G A+ FLQ +T DV L A + +P+G++L L+F S ++ Sbjct: 44 LSHLGLLEISGDDAVTFLQGQVTNDVRLLGDNHAHYTGYCSPKGRLLALFFAFSHNQK-- 101 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSWN 105 LE+++ + + +L Y +RS V I + P V Sbjct: 102 LHLELNQKLLEPIAKRLKMYVMRSKVTINDVSDSTVRFGLSGNNIAELLAPFFATVPKLP 161 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------IASDIK-----TYHELRINHGI 153 E T + + I A + ++ G+ E+ + D K + L I GI Sbjct: 162 YESTSTENGTII-CMPNAGMPRYQIVGNTEQAKAIWQALKKDCKPVGKACWEWLEIQTGI 220 Query: 154 VD----PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D +F+P + +D LN I+ KGCY GQE+V+R + +++R + Sbjct: 221 PDVYLSTQEEFVPQMLN-----LDALNAINYKKGCYTGQEIVARTHYLGKVKRRTQLAHV 275 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + D P + DD VV AI +I + A G + V Sbjct: 276 SSD----SCPTIGDD--------VVDANQQAIGKIVRCAPATDAGFVILVE 314 >gi|24372450|ref|NP_716492.1| hypothetical protein SO_0861 [Shewanella oneidensis MR-1] gi|24346433|gb|AAN53937.1|AE015531_3 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 318 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 27/230 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +TAD+ +L R A P+GK+L F I+ D Sbjct: 24 LSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTIK-DAL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF--IDERFS 121 +L + + + + +L Y + S + +L + Q + F F + + + Sbjct: 83 LLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQELT 142 Query: 122 IAD-----------VLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPS--- 163 + + +L+ + + IA D + L I G PN PS Sbjct: 143 LTEHGAILKDADRFILVLQPQAASALIAEHTVFDASAWQALEIAAGY--PN--LAPSHAN 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|255067899|ref|ZP_05319754.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256] gi|255047887|gb|EET43351.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256] Length = 284 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 35/242 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G++L ++ ED +L + + Sbjct: 11 VRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRVLANMIVLNRGED-LLLIMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---ADVLLH 128 ++++ +L + LR+ VI E P+ ++ + T S S + S AD ++ Sbjct: 70 DLIEAIVKRLRMFVLRAKVIFE--PLPDFAVAGELDETASPSPAAEPALSFPAQADNGVY 127 Query: 129 R-TWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 T H+ ++ A + HE+R + + ST+ A+ Sbjct: 128 TITLPHSGRLKIGEAGLLPEYDAAAENAWNLHEIRSGYAWI--------STVTKETAVAQ 179 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +LN G+ KGCY GQE+++R Q+R +++ ++ G D L +G + E G Sbjct: 180 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLRG-DSLEAAGVTVQNGGEEAG 238 Query: 229 TL 230 + Sbjct: 239 QI 240 >gi|299747549|ref|XP_001837112.2| mitochondrial protein [Coprinopsis cinerea okayama7#130] gi|298407569|gb|EAU84729.2| mitochondrial protein [Coprinopsis cinerea okayama7#130] Length = 388 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 70/268 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------SK 59 ++N++ I V G A FL I++ V K + SA L QG++L I Sbjct: 19 ITNRALISVSGSDANTFLNGILSTHV-----KPPQFSAFLHAQGRVLYDVFIYTDPNPQS 73 Query: 60 IEEDTFILEIDRSKRDS-----LIDKLLFYKLRSNVII-------EIQPINGVVL--SWN 105 + ++++E + L+ L + LRS V + +I G L W Sbjct: 74 TKGPSYLIEYSPPPASNTDVPPLLTYLKRHVLRSKVKVRDASGNYDIWAAWGSELDRKWE 133 Query: 106 Q--EHTFSNSSFIDERFS--------IADVLLHRTWGHN------------EKIASDIKT 143 Q E T+++S ++ + +VL R G E + DI T Sbjct: 134 QKREWTWASSGAVEPVWGREAPWGSEPGEVLDCRGIGMGRRLLVKQGDKPKEATSHDIAT 193 Query: 144 YHEL---RINHGIVDPNTDFLPSTIFPHDALMDLLNG------------------ISLTK 182 + RI HG+ + N D P FP D+ +D++ G + K Sbjct: 194 SDDYLLHRILHGVPEGNVDIPPMHAFPMDSNLDMMGGGTLLQGPDAEVSELIPTSVDFRK 253 Query: 183 GCYIGQEVVSRIQHRNIIRKR--PMIIT 208 GCY+GQE+ R H+ +IRKR P+I++ Sbjct: 254 GCYVGQELTVRTYHKGVIRKRIHPVILS 281 >gi|256087633|ref|XP_002579970.1| hypothetical protein [Schistosoma mansoni] gi|238665470|emb|CAZ36209.1| expressed protein [Schistosoma mansoni] Length = 347 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 37/64 (57%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 DI YH R G+ + +F+ S P +A DL G+S +KGCYIGQE+ +R + Sbjct: 147 DINLYHNARWELGLPEGIKEFITSDTLPFEANADLSGGVSFSKGCYIGQELTARTHFTGV 206 Query: 200 IRKR 203 IR+R Sbjct: 207 IRRR 210 >gi|291333965|gb|ADD93642.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C694] Length = 119 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 +LR+++ I + ++ + + + + L+G+ KGCY+GQEV +R++H+ +RK + Sbjct: 3 KLRVDYVIPEYGSELTEES-YILEMGFERLHGVDFKKGCYVGQEVTARMKHKTELRKGLV 61 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 I ++ +G +L DD IG++ GK ALA R+ D Sbjct: 62 KILSQHEI-SNGEELLLDDKSIGSILTTYGKSALAYVRLKNRD 103 >gi|90408990|ref|ZP_01217121.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas sp. CNPT3] gi|90309904|gb|EAS38058.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas sp. CNPT3] Length = 324 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 42/244 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 I V G+ I FLQ +T D+ +L +A TPQGK+ F + +E+ L+ Sbjct: 27 IAVQGEDRISFLQGQLTCDINSLKIGEQTLAAQCTPQGKVCSLFHVILLEDRVLFLQPSS 86 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + + +L F K++ + E Q I L + F + E S + +LL Sbjct: 87 VTEKQLTALQKYAAFSKVKIHKDSEYQAI---TLLGEKSSDFISQELTTENISKSGLLLP 143 Query: 129 RTWGHNEKIA---------------------SDIKTYHE------LRINHG---IVDPNT 158 ++++ D TYH+ + I G I + N+ Sbjct: 144 NGMHISKQLTPSLRYLLVLKKEQGSALLKQLEDKATYHDDSLWNAMNIAAGMAFIEEINS 203 Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + F+P + + L+GIS TKGCYIGQE ++R ++R ++ I++G P Sbjct: 204 EKFIPQMLN-----LQALDGISFTKGCYIGQETIARAKYRGANKRALFILSGHASCAPKA 258 Query: 218 SPIL 221 L Sbjct: 259 GDTL 262 >gi|71892042|ref|YP_277772.1| putative aminomethyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|118577991|sp|Q493E3|YGFZ_BLOPB RecName: Full=tRNA-modifying protein ygfZ gi|71796148|gb|AAZ40899.1| putative aminomethyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 330 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 41/262 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58 ++ + L + +++ G I L T D+ L +A P+GK++ LY Sbjct: 20 LTFISLEEWTLVRLHGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNLYVFHL 79 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------------- 104 K +E FI ++ K+ I+++ Y + SNV + I N +++ Sbjct: 80 KNQEMAFIERLNICKKQ--IEEMKKYMVFSNVTV-IPDYNAILIGIAGTNARNHLSMFFS 136 Query: 105 ---NQEHTFSNSSFI--------DERF-------SIADVLLHRTWGHNEKIASDIKTYHE 146 N+ HT ++ + ERF S+ D LL+ + + S + Sbjct: 137 VLPNKTHTIIHTQDVTLLYLSSPSERFLLIINKKSVLDYLLNESQSQIQFNDSRQWVSLD 196 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + + I++P T L P MD+L+GIS KGCYIGQE ++RI++R ++ Sbjct: 197 MEAGYPIIEPITSEL---FIPQAVNMDILDGISFNKGCYIGQESIARIKYRGYNKQTLYR 253 Query: 207 ITGTDDLPPSGS-PILTDDIEI 227 + G D + + P D +E+ Sbjct: 254 LNGVMDYKKNYNLPAAGDQVEL 275 >gi|326386667|ref|ZP_08208289.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370] gi|326208982|gb|EGD59777.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370] Length = 249 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G+ FLQ ++T DV T P + G +LTPQGK L FL+ + E D +L+ + D Sbjct: 21 GEDVAAFLQGLVTNDV-TGPLPVWTG--LLTPQGKALFDFLVWR-EGDDLLLDCEAGSAD 76 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 +L +L Y+LR + I + + W Q ++ D R +AD+ L + Sbjct: 77 ALAKRLSLYRLRRRIAIARD--ESLAVHWLPQGEDAPETASPDPR--LADLGLRWIAPAS 132 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + + + R+ G+ + + + L G+S TKGCY+GQE +R+ Sbjct: 133 SRDEAADAAWQAHRLALGVPEGQAEIGSDATLWLETNATDLAGVSFTKGCYVGQENTARM 192 Query: 195 QHRNIIRKRPMII 207 R + +R +++ Sbjct: 193 NWRQKVNRRLVVV 205 >gi|209695953|ref|YP_002263883.1| hypothetical protein VSAL_I2535 [Aliivibrio salmonicida LFI1238] gi|226730791|sp|B6EKN9|YGFZ_ALISL RecName: Full=tRNA-modifying protein ygfZ gi|208009906|emb|CAQ80219.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 318 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 25/237 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +TADV+TLP +GK+ F + D + Sbjct: 25 LNDWALITMIGNDKKSYLQGQVTADVVTLPQDDITFGGHCDAKGKLWSIFQLFN-HNDGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----INGV-VLSWNQEHTFSNSSF---- 115 L RS ++ + ++ Y + S V I + I+G W +HT ++++ Sbjct: 84 ALFQRRSAIETELTEIKKYSVFSKVDIAVGDDVLLGISGKKATDWVNKHTTTDANVRACE 143 Query: 116 --IDERFSIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTD-FLPST 164 + S LL T H + I + D + I HG+ P D L + Sbjct: 144 LGTFAKISETQWLLVTTPEHKKNIINQESNTVLCDESLWSLHTIQHGL--PQLDNALSNA 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 P + + GIS KGCY GQE V+R ++R I ++ +++G ++ +P +G I Sbjct: 202 HIPQAMNLQAVGGISFAKGCYTGQETVARAKYRGINKRAMYLLSGQSNSIPVAGDAI 258 >gi|85707996|ref|ZP_01039062.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1] gi|85689530|gb|EAQ29533.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1] Length = 243 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%) Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYF 55 MS L++++ I++ G+ FLQ ++T DV LP +A+L+ QGK + F Sbjct: 1 MSGKLLNDRAIIRLAATEDGEDVRGFLQGLVTNDVSGELPVY----AALLSAQGKAMFDF 56 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 I + E+ +L+ + D L +L Y+LR + I V W++E + + Sbjct: 57 FIWEGEDGEILLDCEAEAADDLARRLSLYRLRRKIDIARDETQAVF--WSREKF--DGAK 112 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R S L +R + S Y R++ G+ + + +A+ L Sbjct: 113 PDPRLSD---LGYRAVAERSETESADAEYLAYRLSQGVPEGRAEIADILWLETNAVE--L 167 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 +G+S KGCY+GQE +R+ R + +R +++ Sbjct: 168 HGVSFEKGCYVGQENTARMNWRQKVNRRLVVV 199 >gi|121604847|ref|YP_982176.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas naphthalenivorans CJ2] gi|120593816|gb|ABM37255.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas naphthalenivorans CJ2] Length = 317 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 23/238 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L++ I+ G+ A+ FLQ+ +T DV + A +A +G++ F++ K ++ Sbjct: 14 VQLTHLGLIRAAGEDAVKFLQSQLTQDVALMDLTQAHLAAFCNAKGRMQASFILFKRSQE 73 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP----INGVVLSWNQEHTFSNSSFIDER 119 +L R + + +L + +R+ + + GV S E ++ + Sbjct: 74 EVLLVCSRDILAATLKRLSMFVMRAKAKLSDASDEFSLYGVAGS-AIESMAGSTRPAWTK 132 Query: 120 FSIAD---VLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPS 163 I D V L+ G + D++T++ L + GI + Sbjct: 133 ADIGDANMVFLYPGAGQLRALWCAPAASPAPQAAGIDLETWNWLEVQSGIAMITQPIFEA 192 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + + G++ KGCY GQE+V+R Q+R +++R ++ D P G + Sbjct: 193 FV-PQMLNYESVGGVNFKKGCYPGQEIVARSQYRGTLKRRACLVH-ADAAPAVGQEVF 248 >gi|300311915|ref|YP_003776007.1| glycine cleavage system protein T [Herbaspirillum seropedicae SmR1] gi|300074700|gb|ADJ64099.1| glycine cleavage T (aminomethyltransferase) protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 47/272 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I V G+ A FL +T DV L AR + +P+G++L FL+ + ++ ++ Sbjct: 55 LTSLGLIAVTGEDAASFLHGQLTNDVQHLDTGSARLAGYCSPKGRLLATFLMWRDDQASW 114 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L++ RS + ++ +L + +R+ + VL T ++ + E F + Sbjct: 115 -LQLPRSLQPAIQKRLQMFVMRAKAKLADASTERGVLGLAGPAT---ANALAEWFPVLPA 170 Query: 123 ----------------ADVL-------------LHRTW----GHNEKIASDIKTYHELRI 149 AD L W H AS E+R Sbjct: 171 APYDKIDNSHGTLIRLADAAGSPRYQWIAAIDTLTAAWPRLAQHLTPTASLAWRLSEIRA 230 Query: 150 N-HGIVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 GIV + F+P I +L+ G++ KGCY GQE+V+R Q+ +++R M+ Sbjct: 231 GVPGIVAATQEQFVPQMIN-----FELIGGVNFKKGCYPGQEIVARSQYLGKLKRRTMLA 285 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 T +G + G+VV +AL Sbjct: 286 TIDSAAARAGQEVFAAADPGQPCGMVVNAEAL 317 >gi|88797936|ref|ZP_01113523.1| hypothetical protein MED297_00830 [Reinekea sp. MED297] gi|88779133|gb|EAR10321.1| hypothetical protein MED297_00830 [Reinekea sp. MED297] Length = 280 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P + +D L+G+S KGCY GQEVV+R+ ++ +KR +T T D P + + Sbjct: 178 PQNVSLDALDGVSFKKGCYTGQEVVARLHYKGQSKKRLFRLTFTADQSPDETDVFAGTTR 237 Query: 227 IGTL---GVVVGK-KALAIARIDKVDHAIKKG 254 +G + V G+ ALA+ + DK A+ G Sbjct: 238 VGEVIQTAVHNGQGAALAVLKTDKTGEAMTLG 269 >gi|307111245|gb|EFN59480.1| hypothetical protein CHLNCDRAFT_138089 [Chlorella variabilis] Length = 712 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + RI HG+ + +++ + P + +D L GIS TKGCY+GQE+++R + ++R Sbjct: 159 RDHRRWRILHGVAEGDSEIPTGEVVPLEFNIDGLAGISFTKGCYVGQELMARTHFKGVVR 218 Query: 202 KRPMIITGTDDLPPSGS 218 KR M L P GS Sbjct: 219 KRLMPFV----LAPPGS 231 >gi|15805387|ref|NP_294081.1| hypothetical protein DR_0358 [Deinococcus radiodurans R1] gi|6458035|gb|AAF09938.1|AE001896_3 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 303 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 42/289 (14%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S ++V G F+ +T D+ P A L +G+I + + +D + L + Sbjct: 23 SGLRVTGADRTDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRRPDDIY-LHL 81 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE--------IQPINGVVLSWN------QEHTFSNSSF 115 D + L +L Y + V +E + + V W+ Q+ T S Sbjct: 82 DAGQAPLLAARLRRYIIFDQVELEDVSEVLRTVHVWDQAVPGWDDAGAGAQQWTLGGSLV 141 Query: 116 IDERFSIAD---VLLH----------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 + R + + V LH G E+ S++ LR+ GI D D L Sbjct: 142 LGGRVNRSGQPGVDLHYLARDEEAVLAALGGEERPLSELDA---LRVAAGIPDIQRDGLT 198 Query: 163 STIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 T+ P + +D+ L IS KGCY+GQE+++RI+ R R + G + PS + Sbjct: 199 GTL-PQEVGLDVSGPLPAISYRKGCYVGQEIMARIEARGQTRFHLARVAG--EGLPSHAE 255 Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 I D +G G+ G ALA ++ ++ G A+ V GV + Sbjct: 256 IRQGDKVVGQSGLSTGPLALA-----RLRRELEDGAAVEVGGVSARVQL 299 >gi|15603739|ref|NP_246813.1| hypothetical protein PM1874 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722304|gb|AAK03958.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 294 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 21/222 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + +++ G+ A +LQ +T DV L + +A +GKI F + + TF Sbjct: 17 LQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQTF 76 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L + + + +D+L Y + S V P + ++ E + ID + + Sbjct: 77 YLLVKKGLLPTALDQLKKYAVFSKVTFT--PCDWQIIGLAGEKIINACDEIDAQIRVTLS 134 Query: 124 -----DVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMDL 174 +L+H T + AS + + L I GI + P T +F+P + L L Sbjct: 135 SQQPRVILIHPTALDLQANASHV-VWDLLDIQDGIPLLSPETQAEFIPQAL----NLQCL 189 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLP 214 + IS KGCYIGQE+V+R ++R KR M + + ++P Sbjct: 190 EHAISFQKGCYIGQEIVARAKYRG-ANKRAMFTFVAQSQEMP 230 >gi|297623936|ref|YP_003705370.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093] gi|297165116|gb|ADI14827.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093] Length = 348 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS-PILTD 223 + P +A ++ +S KGCY+GQE+++RI+ R +R+R ++ + +PP G+ +L + Sbjct: 235 VLPQEAGLEY--AVSYRKGCYLGQEIMARIEARGNVRRR-LVGLRLESVPPEGARELLAE 291 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 +G LG V L + V H + G L V GV Sbjct: 292 GKVVGRLGTVAEHPQLGTVALASVRHEVGAGAPLLVGGV 330 >gi|84390094|ref|ZP_00991356.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01] gi|84376748|gb|EAP93623.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01] Length = 323 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 45/238 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITIIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83 Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104 S IE + ++EI + S ID + S+V+I I Q ++ + Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKID----IEQTSDVVIGIMGTSANQYVDSIAEGQ 137 Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T S + + D R+++ A+ L+ + EK++ + YHE I+D Sbjct: 138 GKVRTISGGTAVQVSDNRWALLVTEEAAESLVSSS--SAEKVSEALWQYHE------ILD 189 Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247 >gi|241760121|ref|ZP_04758219.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114] gi|241319575|gb|EER56005.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114] Length = 285 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 31/240 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + + Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEH--TFSNSSFIDE-RFSIADV 125 ++++ +L + LR+ V+ E+ P ++G + + H T SF + + + ++ Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLVVSGELADNAEPHPATEPQLSFPAQIQENAVEI 129 Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 L T A + Y HE+R + + T A+ +L Sbjct: 130 ALPHTGRLKISAAENAAEYQAGAENAWNLHEIRSGYPWICAATK--------EAAVAQML 181 Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G + Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGVI 240 >gi|227489453|ref|ZP_03919769.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090631|gb|EEI25943.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 409 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 40/256 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLI 57 +S V SN+ + V G FL +++ IA G+ + L G+I + Sbjct: 112 LSLVDRSNRVILSVTGDDREAFLTNLLSK-------IIAPGATMALDLDANGRIQHEMDV 164 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 + E++ F++ + + ++L D L+ S V I I P+ V + EHT +++F Sbjct: 165 AVTEDEVFLI-VSPHEAETLRDYLVAMIFWSKVEITISPLQLVTVF--GEHTPLDAAFAR 221 Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + AD +L + N ++A + ++ RI G D D Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQ----NGQLAG-LMSFEAYRIARGEPDHPVDCDEK 276 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD----DLPPSGS 218 TI PH+ + L + L KGCY GQE V+R++ N+ R R +++T D LP + Sbjct: 277 TI-PHEVGLWLAEAVDLDKGCYRGQETVARVE--NLGRAPRALVVTLLDGSVPQLPAPQT 333 Query: 219 PILTDDIEIGTLGVVV 234 P+ +GTLG VV Sbjct: 334 PVTLAGRTVGTLGSVV 349 >gi|294891144|ref|XP_002773442.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239878595|gb|EER05258.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 165 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 12/130 (9%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R + +RKR Sbjct: 12 YRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKR 71 Query: 204 --PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMAL 257 M I G D+ SG+ I+ D +IG + + + L IA+I HA KGM + Sbjct: 72 LFGMRIDGDVDV-ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA-PKGMQM 125 Query: 258 TVHGVRVKAS 267 V+A+ Sbjct: 126 NTKQAMVEAT 135 >gi|90416426|ref|ZP_01224357.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium HTCC2207] gi|90331625|gb|EAS46853.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium HTCC2207] Length = 253 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 39/220 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S++ S + +I++ G + FLQ +T D+ +L + A TP+G+++ F E Sbjct: 11 SALAASARGYIRLSGPDSGKFLQGQVTCDMDSLSPSNSIDGAHCTPKGRMVFLFTAHCDE 70 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + + ILE S DS + L Y GV + E T + S+ + + Sbjct: 71 DGSIILEAHPSIIDSALANLKKY--------------GVF--FKTEITDISDSYSNNQTH 114 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 ++D+ R G E +A ++ F+P + +D L I+ Sbjct: 115 LSDLERLRA-GKAEVVAETLEM----------------FIPQMLN-----LDALGYINFK 152 Query: 182 KGCYIGQEVVSRIQHRNIIRKR-PMIITGTDDLPPSGSPI 220 KGCY GQE+++R +R +++R + T+ LP G I Sbjct: 153 KGCYTGQEIIARAHYRGAVKRRMHHLALTTESLPSPGDEI 192 >gi|196232959|ref|ZP_03131808.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428] gi|196222937|gb|EDY17458.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428] Length = 307 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 15/206 (7%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V S ++ + + G + +L +T+DV L + + + T +GK+ +I+ + Sbjct: 16 GAVDFSERAQLMLTGPDRVRYLNGQVTSDVRKLSPGQTQMACVTTAKGKLCADIVITA-Q 74 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFI---- 116 ED ++ + S R+ L+ +L Y + +V IE +L + E T S + + Sbjct: 75 EDALYVDAEGSLREGLLARLERYIVADDVAIEDVSEKYALLHYLGAEPTISGAGKVASAR 134 Query: 117 -------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 D R + + R ++A D LRI GI + +T+ P + Sbjct: 135 RLGRVGWDLRLPREEFVAARESLLAGRVAVDAALAETLRIEAGIPSWGRELDENTL-PPE 193 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQ 195 A +D + I KGCYIGQEV+SR++ Sbjct: 194 AGLDQTH-IDYHKGCYIGQEVISRLR 218 >gi|254362022|ref|ZP_04978151.1| possible GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica PHL213] gi|261491670|ref|ZP_05988252.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494211|ref|ZP_05990711.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093573|gb|EDN74547.1| possible GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica PHL213] gi|261310114|gb|EEY11317.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312685|gb|EEY13806.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 296 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 33/235 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 V LS I++ G A +LQ +T DV KI+ G LT P+GK+ + + Sbjct: 17 VPLSQYCLIEIAGVDAEKYLQGQLTCDVA----KISVGEHTLTSHCDPKGKMSALLRLYR 72 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGVVLSWNQEHTFSNSSFID 117 E + F+ I RS + +L Y + S V E+ P+ G+ E F+ + Sbjct: 73 AENEKFMAIIHRSLLPEALTQLKKYAVFSKVTFTELDTPLYGMA----GEAAFAK---LS 125 Query: 118 ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHD 169 E + + + WG + +D + + + I GI + N + +P Sbjct: 126 ENMTALRLTTGQPRAIVWGEELETTADEQLWTLMDIQDGIPVLLQQNQFELIPQAT---- 181 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 L L + IS TKGCYIGQE V+R ++R ++ + G + LP S I Sbjct: 182 NLQALESAISFTKGCYIGQETVARAKYRGANKRALFTLAGNFESEISLPEVASAI 236 >gi|239815836|ref|YP_002944746.1| folate-binding protein YgfZ [Variovorax paradoxus S110] gi|239802413|gb|ACS19480.1| folate-binding protein YgfZ [Variovorax paradoxus S110] Length = 308 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 22/223 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + + Sbjct: 12 LSDLGVIRAEGPDAASFLHGQLTQDFALLGATEARLAALCTAKGRVIASFVGIRPQPELV 71 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII----EIQPINGVVLSWNQEHTFSNSSFIDERFS 121 +L R + + +L Y LR+ + E + G+ + + ++ +R + Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATEQFALYGLAGTALAANGLDATALPGQRTA 131 Query: 122 I-----------ADVLLHRTW----GHNEKI--ASDIKTYHELRINHGIVDPNTDFLPST 164 I AD + W G A D + + + GIV T + Sbjct: 132 IGQDISAVSLYPADGVPRAMWIAPAGSPAPAGPALDAQLWQWSEVRSGIVTVTTPVV-EA 190 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 P + + G++ KGCY GQE+V+R Q R +++R ++ Sbjct: 191 FVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLV 233 >gi|58258597|ref|XP_566711.1| mitochondrion protein [Cryptococcus neoformans var. neoformans JEC21] gi|134106693|ref|XP_777888.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var. neoformans B-3501A] gi|74687704|sp|Q5KP91|CAF17_CRYNE RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|50260588|gb|EAL23241.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var. neoformans B-3501A] gi|57222848|gb|AAW40892.1| mitochondrion protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 375 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 50/245 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L+++S +++ G A FL+ + DV Y S L G++L + ++ Sbjct: 7 AHLAHKSVLELSGPDAQKFLKGLSCKDV---EYLAGGYSGFLNASGRVLHTAFVFPRSKN 63 Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQ 106 ++++ E L L +KLRS V I ++Q + +W Sbjct: 64 SYLITHESPEDHPAPLTSLLPPFKLRSKVRIKDVTSQWDAWSAWGSDLQGGPSPIRTWKM 123 Query: 107 EHTFSNSSFIDERFSIADVLLH----------RTWGH---------NEKIASDIKTYHEL 147 ++ S D + D+ L W H EK + + T H+L Sbjct: 124 GSGGASESHWDWEGGVRDLGLRDDEVGCWDLRAGWPHMGRQLLIPKGEKPS--LATSHDL 181 Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 R+ G+ + T+ LP P ++ MD+ G+ KGC++GQE+ R H Sbjct: 182 GNMDDYELHRMLLGVPEGPTEILPGHALPLESCMDIHGGVDFRKGCFLGQELTVRTYHTG 241 Query: 199 IIRKR 203 RKR Sbjct: 242 ATRKR 246 >gi|68249068|ref|YP_248180.1| aminomethyltransferase related to GcvT [Haemophilus influenzae 86-028NP] gi|68057267|gb|AAX87520.1| predicted aminomethyltransferase related to GcvT [Haemophilus influenzae 86-028NP] Length = 280 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 23/214 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59 + L+ I+V G +LQ +T+DV+ ++A G+ LT P+GK+ + + K Sbjct: 5 ISLTQYQLIEVQGADVEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117 + + L + + S +D L Y + S V +++ I GV+ + T S ID Sbjct: 61 VSSEQVFLLVKKDILPSALDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173 + SI LL+ T D K + I G+ + P T +F+P + L Sbjct: 121 GQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + IS TKGCYIGQE V+R ++R KR M I Sbjct: 173 VEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205 >gi|222834272|gb|EEE72749.1| predicted protein [Populus trichocarpa] Length = 266 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 +L+ G++ KGCY GQEVV+R Q+R +++R + GT D+P + + I + G+ Sbjct: 151 ELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGM 210 Query: 233 VV--------GKKALAIARIDKVDHAIKKGMA 256 +V G + LA +ID + A+ G A Sbjct: 211 LVNAAPAPQGGWEGLAELKIDAANGALHLGAA 242 >gi|119476432|ref|ZP_01616783.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2143] gi|119450296|gb|EAW31531.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2143] Length = 359 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 44/264 (16%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G FLQ T DV + + A TP+G+++ FL++ E + ++L + Sbjct: 51 LLSISGPDTSKFLQGQTTCDVDLVTCSHSTLGAYCTPKGRVISSFLLASKEPNEYLLRLR 110 Query: 71 RS---KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----------SSFI 116 S S+ K + + + Q + + ++T + +S++ Sbjct: 111 TSVLQSTQSVFSKYIVFSKAEQEVKSDQYVCICLAGETAKNTIQSLFNVATSDIYQTSWL 170 Query: 117 DERFSI---ADVLLHRTW---GHNEKIASDIKTYHELR---------INHGIVDPNTDFL 161 ++ F+I D L+H W E++ + EL+ I+ GI D + + Sbjct: 171 NDNFTIQLDTDGLIHECWILESELEQLWPRLSKGLELKGSRFWELLAISRGIGDVSEQTV 230 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-----------IITGT 210 P + +S KGCY GQE+V+R+Q++ + KRPM ++ G+ Sbjct: 231 -DMFIPQMLNYQITGAVSFNKGCYTGQEIVARMQYKGKL-KRPMYRVKIAANRGELVAGS 288 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234 + P +P ++D ++G +V Sbjct: 289 NLYPT--APKFSNDTTPSSIGNIV 310 >gi|312106517|ref|XP_003150732.1| aminomethyltransferase [Loa loa] gi|307754103|gb|EFO13337.1| aminomethyltransferase [Loa loa] Length = 246 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%) Query: 37 KIARGSA----ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII 92 ++A G A +L +G+I+ ++ + + ++E DR+ + L +K+ +V I Sbjct: 7 QVADGRAQYALLLNSRGRIVEDLILYR-QAGEILIESDRNNQSKLRKLFEMFKVHKDVTI 65 Query: 93 EIQPINGVVLSWNQEHTFSNSSFI----DERF-SIADVLLHRTWGHNEKIASDIKTYHEL 147 E + + V HT S ++ I D R S +L + ++ + D Y E Sbjct: 66 EEETESCVY------HTDSITNDIPGIQDPRVPSFGKRILSKILPDDQTV--DEHAYRER 117 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R N GI + ++ + P D++NG+S KGCY+GQE+ +R + IRKR + Sbjct: 118 RFNFGIPEGPSEL--AGELPLFMNADIMNGVSANKGCYLGQELTARALNAPEIRKRLLPF 175 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 T + +GS + ++ G + GKK LA+ I + Sbjct: 176 TCRGMV--TGSLVNSEGRRAGKVIACTGKKGLALVPISR 212 >gi|260913200|ref|ZP_05919682.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325] gi|260632787|gb|EEX50956.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325] Length = 292 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 23/229 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + I++ G+ A +LQ +T DV L +A P+GK++ F + + E F Sbjct: 18 LQQYTLIEIKGEDAEKYLQGQLTCDVTKLEIGQTTLTAHCDPKGKMVSLFRLIRTEAQCF 77 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + I +S + +D L Y + S V +N ++ E T S I+ + I Sbjct: 78 YVLIKKSLLPTALDLLKKYAVFSKVTFT--ELNWQIIGLAGETTCKAFSDINAQIRIDIQ 135 Query: 123 ----ADVLLHRTWGHNEKIASDI--KTYHELRINHGI----VDPNTDFLPSTIFPHDALM 172 +L+H T + I ++ + + L I G+ +F+P + + Sbjct: 136 TQQPRTLLIHPT---SLDITPNMPYQIWDLLDIQDGMPLLSAQTQGEFIPQAL----NVQ 188 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220 + GIS KGCYIGQE+V+R ++R ++ + G + P GS + Sbjct: 189 SIEQGISFQKGCYIGQEIVARAKYRGANKRAMFTLVGNSIETPEIGSEV 237 >gi|197334522|ref|YP_002156896.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11] gi|226730811|sp|B5FAI0|YGFZ_VIBFM RecName: Full=tRNA-modifying protein ygfZ gi|197316012|gb|ACH65459.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11] Length = 318 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 22/232 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +T DV++L +GK+ F + D + Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFH-HNDGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFIDER 119 L +S ++ + ++ Y + S V I I L W +HT SN++ + Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDDILLGFTGDKALEWINQHTDSNANVRVSK 143 Query: 120 FS----IADV--LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165 F ++D LL T E++ S D + I H + + D L + Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQLD-DQLCNEH 202 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 P + +NGIS KGCY GQE V+R ++R I ++ +++G + PS Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGISEAQPSA 254 >gi|116205227|ref|XP_001228424.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51] gi|88176625|gb|EAQ84093.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51] Length = 517 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 51/223 (22%) Query: 19 AIPFLQAIITADVLT-----------LPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64 A +LQ +ITA++ L +A LT QG+ L I + DT Sbjct: 208 AAKYLQGVITANLFPGYAGPIPTSEHLRSDAGFYAAFLTAQGRTLHDVFIYRDARDTAHP 267 Query: 65 ----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++E+D ++ D L + +KLR+ + + +DE Sbjct: 268 PGHSWLVEVDAAEADRLQKHICRHKLRAKFDVRL---------------------LDE-- 304 Query: 121 SIADVLLHRTWG--HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 V WG H+ I H R G ++ L + PH++ D ++ I Sbjct: 305 GEGTVWQAVIWGPPHSPGIKLPPPPLH-ARHPRG----QSELLFNQALPHESNTDAMHAI 359 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMII-TGTDDLPPSGS 218 KGCY+GQE+ R +HR ++RKR P ++ PP G+ Sbjct: 360 DFRKGCYVGQELTIRTEHRGVVRKRILPCVLYPDNGQQPPPGN 402 >gi|22127159|ref|NP_670582.1| putative global regulator [Yersinia pestis KIM 10] gi|45443330|ref|NP_994869.1| putative global regulator [Yersinia pestis biovar Microtus str. 91001] gi|108806367|ref|YP_650283.1| putative global regulator [Yersinia pestis Antiqua] gi|108813258|ref|YP_649025.1| putative global regulator [Yersinia pestis Nepal516] gi|145597923|ref|YP_001161999.1| putative global regulator [Yersinia pestis Pestoides F] gi|150260090|ref|ZP_01916818.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125] gi|162420968|ref|YP_001608147.1| putative global regulator [Yersinia pestis Angola] gi|165924945|ref|ZP_02220777.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937370|ref|ZP_02225934.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|166010263|ref|ZP_02231161.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212747|ref|ZP_02238782.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399919|ref|ZP_02305437.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418709|ref|ZP_02310462.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425340|ref|ZP_02317093.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467686|ref|ZP_02332390.1| putative aminomethyltransferase [Yersinia pestis FV-1] gi|170023124|ref|YP_001719629.1| putative global regulator [Yersinia pseudotuberculosis YPIII] gi|218928072|ref|YP_002345947.1| putative global regulator [Yersinia pestis CO92] gi|229837585|ref|ZP_04457747.1| predicted folate-dependent regulatory protein [Yersinia pestis Pestoides A] gi|229840808|ref|ZP_04460967.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842633|ref|ZP_04462788.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. India 195] gi|229903714|ref|ZP_04518827.1| predicted folate-dependent regulatory protein [Yersinia pestis Nepal516] gi|270487493|ref|ZP_06204567.1| folate-binding protein YgfZ [Yersinia pestis KIM D27] gi|294502935|ref|YP_003566997.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003] gi|118578000|sp|Q1CB34|YGFZ_YERPA RecName: Full=tRNA-modifying protein ygfZ gi|118578001|sp|Q7CGT3|YGFZ_YERPE RecName: Full=tRNA-modifying protein ygfZ gi|118578002|sp|Q1CF05|YGFZ_YERPN RecName: Full=tRNA-modifying protein ygfZ gi|166979591|sp|A4TIB4|YGFZ_YERPP RecName: Full=tRNA-modifying protein ygfZ gi|226730813|sp|A9R4L4|YGFZ_YERPG RecName: Full=tRNA-modifying protein ygfZ gi|226730814|sp|B1JNT4|YGFZ_YERPY RecName: Full=tRNA-modifying protein ygfZ gi|21960221|gb|AAM86833.1|AE013929_6 hypothetical protein y3283 [Yersinia pestis KIM 10] gi|45438199|gb|AAS63746.1| Predicted aminomethyltransferase related to GcvT [Yersinia pestis biovar Microtus str. 91001] gi|108776906|gb|ABG19425.1| hypothetical protein YPN_3098 [Yersinia pestis Nepal516] gi|108778280|gb|ABG12338.1| hypothetical protein YPA_0370 [Yersinia pestis Antiqua] gi|115346683|emb|CAL19566.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145209619|gb|ABP39026.1| hypothetical protein YPDSF_0617 [Yersinia pestis Pestoides F] gi|149289498|gb|EDM39575.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125] gi|162353783|gb|ABX87731.1| putative aminomethyltransferase [Yersinia pestis Angola] gi|165914844|gb|EDR33457.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|165923145|gb|EDR40296.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990749|gb|EDR43050.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206039|gb|EDR50519.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962703|gb|EDR58724.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050627|gb|EDR62035.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055740|gb|EDR65524.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749658|gb|ACA67176.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] gi|229679484|gb|EEO75587.1| predicted folate-dependent regulatory protein [Yersinia pestis Nepal516] gi|229690943|gb|EEO82997.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697174|gb|EEO87221.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704273|gb|EEO91284.1| predicted folate-dependent regulatory protein [Yersinia pestis Pestoides A] gi|262360970|gb|ACY57691.1| hypothetical protein YPD4_0782 [Yersinia pestis D106004] gi|262364910|gb|ACY61467.1| hypothetical protein YPD8_0777 [Yersinia pestis D182038] gi|270335997|gb|EFA46774.1| folate-binding protein YgfZ [Yersinia pestis KIM D27] gi|294353394|gb|ADE63735.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003] gi|320014025|gb|ADV97596.1| putative folate-dependent regulatory protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 330 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 40/257 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104 E +E RS D+ + +L Y + S V+IE QP + GV S Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 105 NQEH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 + EH NS+ + ERF + A L+ + G + +D K + L I Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSPILTDDIE 226 S P +D+E Sbjct: 255 N----ASRVPAAGEDLE 267 >gi|186896605|ref|YP_001873717.1| putative global regulator [Yersinia pseudotuberculosis PB1/+] gi|226730812|sp|B2K0P7|YGFZ_YERPB RecName: Full=tRNA-modifying protein ygfZ gi|186699631|gb|ACC90260.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+] Length = 330 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 40/257 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQ----------- 106 E +E RS D+ + +L Y + S V+IE QP + GV S + Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 107 --EH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 EH NS+ + ERF + A L+ + G + +D K + L I Sbjct: 139 STEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSPILTDDIE 226 S P +D+E Sbjct: 255 N----ASRVPAAGEDLE 267 >gi|307244858|ref|ZP_07526957.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253812|ref|ZP_07535666.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258268|ref|ZP_07540011.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854303|gb|EFM86509.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863296|gb|EFM95236.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867728|gb|EFM99573.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 279 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 LS I++ G A +LQ +T DV K+A G LT P+GKI + + Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKISALIRLYRQA 58 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115 D FI I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171 ++ +I WG + +D + + + I GI + N + +P L Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 + N IS +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 220 >gi|165975514|ref|YP_001651107.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250536|ref|ZP_07336733.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251880|ref|ZP_07338051.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|165875615|gb|ABY68663.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649310|gb|EFL79495.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650524|gb|EFL80683.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 295 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V LS I++ G A +LQ +T DV K+A G LT P+GK+ + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112 + D FI I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 72 RQAADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168 ++ +I WG + +D + + + I GI + N + +P Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT--- 181 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 L + N IS +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 182 -NLQAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 236 >gi|319638072|ref|ZP_07992836.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102] gi|317400717|gb|EFV81374.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102] Length = 285 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 31/240 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + + Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS--SFIDE-RFSIADV 125 ++++ +L + LR+ V+ E+ P ++G + H SF+ + + + ++ Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAAPHPAVEPQLSFLAQIQENTVEI 129 Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 L T A + Y HE+R + + T A+ +L Sbjct: 130 ALPHTGRLKISAAENASEYQAEAENAWNLHEIRSGYPWICAATK--------EAAVAQML 181 Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G + Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGVI 240 >gi|313215504|emb|CBY16216.1| unnamed protein product [Oikopleura dioica] Length = 191 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 16/121 (13%) Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 ++ YH R GI + + + FP + DL++G+S KGCY+GQE+ +R H + Sbjct: 41 LEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGVSFHKGCYLGQELTARTFHTGVT 100 Query: 201 RKR--PMIITGTDDLPP-----SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 RKR P+ + +D+ S I+T D E LA+ R D D +K Sbjct: 101 RKRIVPLKFSPGNDVSDIKAKRSAGKIITVDSE---------GNGLAMFRTDNFDKTVKV 151 Query: 254 G 254 G Sbjct: 152 G 152 >gi|311106017|ref|YP_003978870.1| glycine cleavage T-protein family protein [Achromobacter xylosoxidans A8] gi|310760706|gb|ADP16155.1| glycine cleavage T-protein family protein [Achromobacter xylosoxidans A8] Length = 333 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 44/227 (19%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----EDTFILE--I 69 G A+ FL +T DV LP AR + T +G++L ++ + +D L + Sbjct: 31 GADALTFLHGQLTQDVTGLPQDAARLAGYCTAKGRLLATLVMWRGAPGGADDAPQLYGLV 90 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLS------------------WNQEHT 109 + +L+ +L + LR+ + P++ GV S W Q Sbjct: 91 RQDLSQALLKRLSMFVLRAKAKLAATPLHVAGVTASAAEAAALEAAAGALPRAPW-QRVD 149 Query: 110 FSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT-----------YHELRINHGIVDPN 157 + ++I AD L W +E++A +H + GI P Sbjct: 150 LPSGTWIAA--PSADARLRWWWIASDEQLAQSAALAGALGLAPAAQWHTADLAAGI--PW 205 Query: 158 TDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 IF P +DL+ G+S TKGCY GQEVV+R +R +++R Sbjct: 206 ITAATQDIFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRGTVKRR 252 >gi|225075688|ref|ZP_03718887.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens NRL30031/H210] gi|224952959|gb|EEG34168.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens NRL30031/H210] Length = 285 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 35/240 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + + Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEH-----TFSNSSFIDERFSIA 123 ++++ +L + LR+ V+ E P ++G + + H S S+ I E + Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFEPMPDLAVSGELADNAEPHPATEPQLSFSAQIQE--NAV 127 Query: 124 DVLLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMD 173 ++ L T A + Y HE+R + + T A+ Sbjct: 128 EIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYPWICAATK--------EAAVAQ 179 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +LN + KGCY GQE+++R Q+R +++ +++G D L +G + + E G Sbjct: 180 MLNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGITVKVGEEEAG 238 >gi|114048794|ref|YP_739344.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-7] gi|113890236|gb|ABI44287.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-7] Length = 318 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 37/235 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 24 LSHLGLIKVVGEQGRSFMHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQDALL 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSF--I 116 +L +D+L +L +L+ + + W Q F F I Sbjct: 84 ML----MPKDTL--ELDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQAVPFVTQHFGEI 137 Query: 117 DERFSI---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 E ++ AD + T E D + L I G PN Sbjct: 138 TEELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGY--PN--LA 193 Query: 162 PS---TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 PS P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 194 PSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|261380351|ref|ZP_05984924.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703] gi|284796872|gb|EFC52219.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703] Length = 285 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 31/240 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + + Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS--SFIDE-RFSIADV 125 ++++ +L + LR+ V+ E+ P ++G + + H + SF + + + ++ Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAKPHPAAEPQLSFPAQIQENAVEI 129 Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 L T A + Y HE+R + + T A+ +L Sbjct: 130 ALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYPWICAATK--------ETAVAQML 181 Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G + Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKIGEEEAGVI 240 >gi|237807613|ref|YP_002892053.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187] gi|237499874|gb|ACQ92467.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187] Length = 299 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 35/242 (14%) Query: 3 SVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 SVY L + + I++ G A+ +L +T DV+ L + A TP+GK+L F + K E Sbjct: 13 SVYHLDDITVIRLEGPDAVKYLNGQVTCDVMALNPGQSILGAHCTPKGKVLAVFRLFKRE 72 Query: 62 EDTFIL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +D ++ E+ + L +F K+ + + + G+ + + Sbjct: 73 QDLLLIYKKELTEIQLAELKKYAVFSKVTITDVSDQFDVFGIAGTGTDAWLATGPG---- 128 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF--------LP-------S 163 AD + + I S+ + EL++ P TD+ LP + Sbjct: 129 ----ADNIQCQINPDRWLILSEKQQPLELKLPEC---PATDWRGLDILDGLPQFGKNAQA 181 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + L+GIS TKGCY GQE+V+R ++R + I+ GT SG P+ T+ Sbjct: 182 EFIPQAFNLQALHGISFTKGCYTGQEIVARAKYRGTNNRALFILKGT-----SGQPVNTN 236 Query: 224 DI 225 + Sbjct: 237 TV 238 >gi|284105831|ref|ZP_06386235.1| glycine cleavage system T protein [Candidatus Poribacteria sp. WGA-A3] gi|283830118|gb|EFC34384.1| glycine cleavage system T protein [Candidatus Poribacteria sp. WGA-A3] Length = 364 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 48/268 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S++ + V G+ + +LQ+II+ D+L L S+ ++ +GKIL YF + ++EE Sbjct: 48 VSHRGLLHVTGEDRVTWLQSIISNDLLPLQSGDWLYSSFMSHKGKILSYFRVYRLEESLV 107 Query: 66 ILEIDRSKRDSL--IDKLLFYKLRS---------NVIIEIQP------------------ 96 + ++ S + K L Y ++ +I+ P Sbjct: 108 VEDVGESGAVTYDTFRKFLLYGTKAKMKNGEDTWGIILVSGPKAPLLIRHALDVDISGLK 167 Query: 97 --------ING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143 +NG +++ QE + + ++ D R W E + A Sbjct: 168 QGGFLTHDLNGQPALIATTQETGERDVELLMPNEAM-DQAWSRLWEAGEAVGLRAFGTAA 226 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI GI D L I P +A ++ SL+KGCY GQEVV+R+ +++R Sbjct: 227 RESLRIEAGIPKLGPD-LNERIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGTVKRR 284 Query: 204 --PMIITGTD-DLPPSGSPILTDDIEIG 228 ++I + +P + + ++D E+G Sbjct: 285 LVGLVIDSPEAPIPSPDAKVFSEDREVG 312 >gi|168027952|ref|XP_001766493.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682402|gb|EDQ68821.1| predicted protein [Physcomitrella patens subsp. patens] Length = 428 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R+ G+ + +T+ P + + LN I KGCY+GQE+V+R HR +IRKR M Sbjct: 280 RMEQGVAEGSTEIPKGEAIPLEYNLAGLNAIDFNKGCYVGQELVARTHHRGVIRKRVM 337 >gi|325283646|ref|YP_004256187.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP] gi|324315455|gb|ADY26570.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP] Length = 309 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 59/309 (19%) Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 MS+ + L ++V G + F+Q +T D+ P + L +G+I + I + Sbjct: 1 MSTFFTLVPSGALRVTGADRLDFVQGQMTNDLRGCPTPGYVAACFLNVRGQIEHFARIYR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------GVVLSWN 105 +D + L +D + +L ++L Y + V EIQ ++ GV W Sbjct: 61 RADDIY-LHLDAGQAPALAERLRRYVIFDQV--EIQDLSADLRTLHLWGEWPAGVTEGWP 117 Query: 106 QEHTFSNSSFIDERFSIADVL------------LHRTWGHNEKIASDI--------KTYH 145 Q + +++ + A +L LH E + + + +++ Sbjct: 118 QVAAAAGAAWTVQMGGAAVLLGAVNRSGQLGLDLHYLAAQEEAVMAALHTALPLNERSWA 177 Query: 146 EL---RINHGIVDPNTD-FLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRN 198 EL R+ G+ +P D FL P + +D L IS KGCY+GQE+++R++ R Sbjct: 178 ELQTARVAAGLPEPALDGFLGH--LPQEVGLDTGGPLPAISYRKGCYVGQEIMARLEARG 235 Query: 199 IIR---KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 R R + GT+ GS +++ +G G+ G AL R+D + + Sbjct: 236 RARYGLGRLRVPAGTE----VGSEVVSAGRAVGQTGLEAGGLALCRLRLD-----LPQDA 286 Query: 256 ALTVHGVRV 264 AL V+G V Sbjct: 287 ALEVNGQAV 295 >gi|254514102|ref|ZP_05126163.1| glycine cleavage T protein [gamma proteobacterium NOR5-3] gi|219676345|gb|EED32710.1| glycine cleavage T protein [gamma proteobacterium NOR5-3] Length = 302 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 24/246 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +L ++ I + G FLQ +T D L IA A+ +G++L L+ ++ + Sbjct: 5 ACFLPKEAMIHLRGSKIPEFLQGQLTCDTRKLSPGIAVMGALCNVKGRVLSDLLVVQVSD 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----SSFID 117 +L + RS S+ D L Y S + +E ++ + + + Sbjct: 65 THVVLRLRRSLATSVADTLRRYAQFSRISVEPDSREDAIVGLRESVVTPTPDALPAGHMA 124 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHEL--RINHGIVDPNTDFLPSTI---------- 165 V L RT G +E ++ D +L +N +D + T+ Sbjct: 125 ASIRTGTVTLQRTPGLSEILSVDPDNPIDLADTLNERTMDAEPRWAMETLRSGHYAVELE 184 Query: 166 ----FPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGS 218 F AL DL ++ KGCY GQE+V+R+ ++ ++R I + + P + Sbjct: 185 DLGAFTPQALNYDLTGLVAFNKGCYTGQEIVARLHYKGQSKRRLQIFETPESVNGPARDT 244 Query: 219 PILTDD 224 P+ T + Sbjct: 245 PLQTSE 250 >gi|76155821|gb|AAX27094.2| SJCHGC03303 protein [Schistosoma japonicum] Length = 242 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 DI YH R G+ + +F+ + P +A DL G+S +KGCYIGQE+ +R + Sbjct: 33 DISLYHTARWELGLPEGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGV 92 Query: 200 IRKR--PMIITGTDDL 213 IR+R P+ I T ++ Sbjct: 93 IRRRYVPIKILSTGNI 108 >gi|29653776|ref|NP_819468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 493] gi|153209655|ref|ZP_01947468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii 'MSU Goat Q177'] gi|154707625|ref|YP_001424980.1| aminomethyltransferase family protein [Coxiella burnetii Dugway 5J108-111] gi|161830229|ref|YP_001596362.1| glycine cleavage T-protein [Coxiella burnetii RSA 331] gi|165924115|ref|ZP_02219947.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 334] gi|212218958|ref|YP_002305745.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154] gi|29541039|gb|AAO89982.1| aminomethyltransferase family protein [Coxiella burnetii RSA 493] gi|120575283|gb|EAX31907.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356911|gb|ABS78373.1| aminomethyltransferase family protein [Coxiella burnetii Dugway 5J108-111] gi|161762096|gb|ABX77738.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 331] gi|165916438|gb|EDR35042.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 334] gi|212013220|gb|ACJ20600.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154] Length = 258 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 FI V G++A FLQ +T DV + A P+G+++ F + + +D + L + Sbjct: 12 GFILVKGENAATFLQGQLTCDVREINEIRGALGACCDPKGRMVANFFVFQKNKDYYFL-L 70 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 +S I L Y + S V E+ +N E +S+ ++ L Sbjct: 71 PKSMISITIAHLKKYAVFSKV--ELLAVNEA-----------------ETYSLPEITLKE 111 Query: 130 TWGHNEKIASDIKTYHELRINHGIV--DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 D + L + G+V P T + P + GIS TKGCYIG Sbjct: 112 L---------DENDWRSLNVRAGLVWVYPQTS---GKLIPQMINLQKWGGISFTKGCYIG 159 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 QE+++R +H +++ + PP+ L + + T+G+VV Sbjct: 160 QEIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND-QTMGIVV 205 >gi|46143319|ref|ZP_00204442.1| COG0354: Predicted aminomethyltransferase related to GcvT [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207545|ref|YP_001052770.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae L20] gi|190149326|ref|YP_001967851.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|126096337|gb|ABN73165.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189914457|gb|ACE60709.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 295 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V LS I++ G A +LQ +T DV K+A G LT P+GK+ + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112 + D FI I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 72 RQAADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168 ++ +I WG + +D + + + I GI + N + +P Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT--- 181 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 L + N IS +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 182 -NLQAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 236 >gi|226356920|ref|YP_002786660.1| aminomethyltransferase [Deinococcus deserti VCD115] gi|226318910|gb|ACO46906.1| putative aminomethyltransferase [Deinococcus deserti VCD115] Length = 309 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 43/269 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S +++ G + F+ +T D+ P A L +G+I + + E+D + L + Sbjct: 27 SSLRITGADRVDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRREQDIY-LHL 85 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE--------IQPINGVVLSWNQEHTFSNSSFID---- 117 D + L +L Y + V +E + + V W + + S + Sbjct: 86 DAGQAPGLAARLKRYIIFDQVEVEDVTDTLRTVHVWDQAVPGWLTDGPAAQSLDLGGAVT 145 Query: 118 -----ERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTDFLPSTI 165 R + V LH E + + + R+ GI D D + + Sbjct: 146 LAGRVNRSGTSGVDLHYLARQEEDVLNALGGQEAPLDELETARVRAGIPDIVRDGF-TGV 204 Query: 166 FPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 P + +DL L IS KGCY+GQE+++R++ R R ++GTD L Sbjct: 205 LPQEVGLDLGGPLPAISYRKGCYVGQEIMARLEARGNTRYHLARLSGTD---------LP 255 Query: 223 DDIEIGTLGVVVGKK-----ALAIARIDK 246 D E+ G VVG+ L++AR+ K Sbjct: 256 DHAEVTAEGKVVGQSGHFAGGLSLARLRK 284 >gi|117921854|ref|YP_871046.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. ANA-3] gi|117614186|gb|ABK49640.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. ANA-3] Length = 318 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 27/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK++ F I+E Sbjct: 24 LSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMIASFRTFAIQEALL 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF--IDERFS 121 +L + R + + +L Y + S + +L + Q F F I E + Sbjct: 84 ML-LPRETIEVDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQATQFVTQHFGEITEELT 142 Query: 122 I---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS--- 163 + AD + T E D + L I G PN PS Sbjct: 143 LVEHGAILKDADRFILVLQPEAATTLVGEHTVFDASAWQALEITAGY--PN--LAPSHAN 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGT 245 >gi|317509404|ref|ZP_07967023.1| aminomethyltransferase folate-binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252327|gb|EFV11778.1| aminomethyltransferase folate-binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 323 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 15/202 (7%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 ++V SN I++ G + +L I+T V LP + IL GK+ + + + Sbjct: 20 AAVDRSNLDVIRLTGPERLDWLNKIVTQKVDELPAASQTQALILDAHGKVEHHMRVFETG 79 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 EDT L + K L+D L + V+ E P V+ ++ Q F + E F Sbjct: 80 EDTTWLVTEPGKGAPLLDYLRKMVFWAKVVPEAAPDRKVIATFEQGKRF-EAVHPSESFE 138 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP----NTD--FLPSTIF---PHDALM 172 L T G + T+ + + ++P +TD LP + P A + Sbjct: 139 EVWATLTSTRGFR-----PVGTWADEALRVAALEPRLGLDTDERTLPHEVGWVNPRGAEL 193 Query: 173 DLLNGISLTKGCYIGQEVVSRI 194 + L KGCY GQE VS+I Sbjct: 194 AEWKAVHLNKGCYRGQETVSKI 215 >gi|322513844|ref|ZP_08066926.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976] gi|322120331|gb|EFX92270.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976] Length = 295 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 35/237 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V LS I++ G A +LQ +T DV K+A G LT P+GK+ + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTSHCDPKGKMSALIRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112 + D F+ I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 72 RQAADKFVAMIHVDLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168 ++ +I WG + +D + + + I G+ + N + +P Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLINIQDGVPILLKANQFELIPQAT--- 181 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSPI 220 L + N IS TKGCYIGQE V+R ++R KR M G LP G I Sbjct: 182 -NLQAVENAISFTKGCYIGQETVARAKYRG-ANKRAMFTLVGKFEGEVSLPEIGGSI 236 >gi|148981090|ref|ZP_01816283.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3] gi|145960993|gb|EDK26317.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3] Length = 323 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 45/238 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMVGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83 Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104 S IE + ++EI + S +D + S+VII + Q I+ + S Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKVD----IEQTSDVIIGVMGAAADQYIDSISESQ 137 Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + S + + + R+++ A+ L+ T EK++ + YHE I+D Sbjct: 138 GKVRAISGGTAVQVAENRWALLVTEQAAEALV--TSSSAEKVSEALWQYHE------IID 189 Query: 156 PN---TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 T + P + + GIS TKGCY GQE V+R ++R + ++ I++G+ Sbjct: 190 AQPHLTKAEQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKREMRIVSGS 247 >gi|325123348|gb|ADY82871.1| hypothetical protein BDGL_002285 [Acinetobacter calcoaceticus PHEA-2] Length = 240 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + KI ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENTTRYTAICDLKGRIHFGLWLKKINAESFEIVVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q G+V N + F+ + + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GIVFPKVVNHQTEFTTAETDISEWQKQAIMTGQAWIT 129 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 T HE + P + + G++ KGCY+GQE+V+R Sbjct: 130 Q-------TTEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT + P S + L +D+E+ G L +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDVEVVNSIANDEGYLALVVAKPA 216 >gi|108803026|ref|YP_642963.1| glycine cleavage T protein [Rubrobacter xylanophilus DSM 9941] gi|108764269|gb|ABG03151.1| glycine cleavage T protein (aminomethyl transferase) [Rubrobacter xylanophilus DSM 9941] Length = 309 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 7/86 (8%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR---NIIRKRP 204 RI G+ TDF P FP +A + L +S KGCY GQE V+R+++R N +R Sbjct: 188 RIAAGVPRFGTDFTPEN-FPAEAGL-LERAVSFEKGCYPGQETVARMRYRGHPNRTLRRL 245 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTL 230 ++ +GT PP + IL D GTL Sbjct: 246 LVASGTPPAPP--AEILQGDRRAGTL 269 >gi|221068070|ref|ZP_03544175.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1] gi|220713093|gb|EED68461.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1] Length = 318 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 23/244 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSADEI 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 +L DRS + +L + LR+ + + + + ++ +++ Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLTGQAAQHHAGAAAAPWTLSQQ 134 Query: 123 --ADVLLHRTWGHNEK---------------IASDIKTYHELRINHGIVDPNTDFLPSTI 165 A VL N++ ++ D+ + E + G+ + + + + Sbjct: 135 GDAHVLALYPAAGNQRALWIGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+ Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251 Query: 226 EIGT 229 E T Sbjct: 252 EQAT 255 >gi|227541048|ref|ZP_03971097.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183308|gb|EEI64280.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 409 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 40/256 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLI 57 +S V SN+ + V G FL +++ IA G+ + L G+I + Sbjct: 112 LSLVDRSNRVILSVTGDDREAFLTNLLSK-------IIAPGATMALDLDANGRIQHEMDV 164 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 + E++ F++ + + ++L D L+ S V I I P+ V + +HT +++F Sbjct: 165 AVTEDEVFLI-VSPHEAETLRDYLVAMIFWSKVEITISPLQLVTVF--GKHTPLDAAFAR 221 Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + AD +L + N ++A + ++ RI G D D Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQ----NGQLAG-LMSFEAYRIARGEPDHPVDCDEK 276 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD----DLPPSGS 218 TI PH+ + L + L KGCY GQE V+R++ N+ R R +++T D LP + Sbjct: 277 TI-PHEVGLWLAEAVDLDKGCYRGQETVARVE--NLGRAPRALVVTLLDGSVPQLPAPQT 333 Query: 219 PILTDDIEIGTLGVVV 234 P+ +GTLG VV Sbjct: 334 PVTLAGRTVGTLGSVV 349 >gi|307247033|ref|ZP_07529087.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249255|ref|ZP_07531252.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251578|ref|ZP_07533485.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256077|ref|ZP_07537865.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260509|ref|ZP_07542203.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306856485|gb|EFM88634.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858779|gb|EFM90838.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861042|gb|EFM93048.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865499|gb|EFM97394.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869821|gb|EFN01604.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 279 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 LS I++ G A +LQ +T DV K+A G LT P+GK+ + + Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLYRQA 58 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115 D FI I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171 ++ +I WG + +D + + + I GI + N + +P L Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 + N IS +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 220 >gi|330446930|ref|ZP_08310581.1| folate-dependent regulatory protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491121|dbj|GAA05078.1| folate-dependent regulatory protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 327 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 37/244 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + +LQ +T DV++L + +A +GK+ + IE Sbjct: 29 LDDWGMVTLIGPDSKAYLQGQLTCDVVSLEAGKSTLAAHCDAKGKMRTVMRLFHIENGYG 88 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L+ +S + I +L Y + S +I P + +VL + E + I+ F+ D Sbjct: 89 YLQ-RQSVMATQIPELKKYAVFSKT--DITPSDNIVLGLSGEQA---QAAINAYFTEGDE 142 Query: 126 LLH-----------RTW------GHNEKIA---------SDIKTYHELRINHGI--VDPN 157 + H + W H E IA SD + IN + VD Sbjct: 143 VRHNEIATAVKVDAQRWFIIASPEHAETIAQHFAADATFSDSTLWDLYDINAALPRVDSA 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 T+ P + +NGIS KGCY GQE V+R ++R I ++ I+TG P Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPQA 259 Query: 218 SPIL 221 L Sbjct: 260 GDAL 263 >gi|90412075|ref|ZP_01220082.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK] gi|90327053|gb|EAS43432.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK] Length = 329 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 38/254 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I + G +LQ +T DV++LP + A +GK+ F + Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPVNSSTLGAHCDAKGKMRTIFRLFNH 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E L+ +S D+ + +L Y + S V +I N V+L + E + ID+ F Sbjct: 84 NEGYGFLQ-RKSVMDTQLPELKKYAVFSKV--DIDASNDVLLGLSGEQA---QAVIDQHF 137 Query: 121 SIADVLLHRTWGHNEKIASD------------------IKTYHELRINHGIV-------- 154 + T G K+ D ++T++ ++++ + Sbjct: 138 PGNGDVRVITAGTAIKVNDDRWLFAIAPEQAEQLINTLVETHNSMQLSDSTLWDLYDVLY 197 Query: 155 -DPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P D + + F P + ++GIS KGCY GQE V+R ++R I ++ I+TG Sbjct: 198 AIPRVDAVTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTG--- 254 Query: 213 LPPSGSPILTDDIE 226 + P+ D +E Sbjct: 255 -EATQCPLTGDALE 267 >gi|260548872|ref|ZP_05823094.1| glycine cleavage T protein [Acinetobacter sp. RUH2624] gi|260408040|gb|EEX01511.1| glycine cleavage T protein [Acinetobacter sp. RUH2624] Length = 240 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 40/239 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + KI ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINAESFEIVVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q GVV N FS++ + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GVVFPKVVNDHTEFSSTETDISEWQKQAIMTGQAW-- 127 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 IA T HE + P + + G++ KGCY+GQE+V+R Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKALAIARI 244 + + + ++ GT D PS + L +D+E+ G + +VV K A A+A + Sbjct: 165 LWFKAKPKHWLHLVQGTGD-APSPATQLHNDVEVVNSTQTTDGYIALVVAKPA-ALAEL 221 >gi|325579260|ref|ZP_08149216.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392] gi|325159495|gb|EGC71629.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392] Length = 279 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 28/230 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ + Sbjct: 5 ISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGTSTLTAHCDPKGKMNSLFRLIKLSAE 64 Query: 64 TFIL--------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 F++ +D K+ ++ K+ F L ++ I G + + + N + Sbjct: 65 QFLILMPKALLAPLDHLKKYAVFSKVTFQVLDWQIVGLIGEKCGRIHAQIELDIDENRAI 124 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171 + S+ DV + D K + I G+ + +F+P + L Sbjct: 125 LINPTSL-DVTFN----------GDDKQWLCADIQAGLPSLSAETQNEFIPQAL----NL 169 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI 220 + IS TKGCYIGQE V+R ++R ++ +++G + P GS I Sbjct: 170 QAIEQAISFTKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219 >gi|152981354|ref|YP_001353678.1| glycine cleavage T protein [Janthinobacterium sp. Marseille] gi|151281431|gb|ABR89841.1| glycine cleavage T protein [Janthinobacterium sp. Marseille] Length = 349 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I G A FL +T DV L AR + +P+G++L FL + D Sbjct: 43 LTHLGLIAASGDDAANFLHNQLTNDVEHLGSSEARLAGYCSPKGRLLASFLYWQTA-DRI 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQ--PINGVVLSW--------- 104 +L++ R + ++ +L + LR+ V++ I ++ W Sbjct: 102 MLQLPRELQATIQKRLQMFILRAKAKLADVSEEYVMLGIAGPAAASALMPWFPTLPVAIY 161 Query: 105 ----NQEHTF--SNSSFIDERFSIADVLLH--RTWGHNEKI--ASDIKTYHELRINHGI- 153 N+ T +++F R+ + W H +I AS +H I+ G+ Sbjct: 162 GKVDNEAGTVIRHSNAFEVPRYQWITTVEQAIEAWPHLTEILQASGADAWHLAEIDGGVP 221 Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 F+P I +LL G++ KGCY GQE+V+R Q+ +++R + + T Sbjct: 222 HITAATQEQFVPQMIN-----FELLGGVNFKKGCYPGQEIVARSQYLGKLKRRMLHASVT 276 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKK 237 G+ I + + G+VV + Sbjct: 277 ATQVAPGTEIFSANDPDQPCGMVVNAE 303 >gi|91788384|ref|YP_549336.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas sp. JS666] gi|91697609|gb|ABE44438.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas sp. JS666] Length = 317 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 20/217 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I+V G+ + FLQ +T DV L AR A +G++ F+I K + Sbjct: 20 LAHLGVIRVAGEDTVKFLQGQLTQDVALLSLSEARLGAFCNVKGRMQASFVIFKRSPEEV 79 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQ-EHTFSNSSFIDERFSI 122 +L R + + +L + LR+ ++ + ++ N E + + + I Sbjct: 80 LLVCSRDILPATLKRLSMFVLRAKAMLSDASAEFALYGVAGNAIELIVGGNRPVWTKSDI 139 Query: 123 AD---VLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPSTIF 166 D + LH G + DI ++ L + GI + + Sbjct: 140 GDASLMFLHPGAGQPRALWCAPAGSPRPEGPLLDIARWNWLEVRSGIAMITQPIFEAFV- 198 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P + + G++ KGCY GQE+V+R Q R +++R Sbjct: 199 PQMLNYESVGGVNFKKGCYPGQEIVARSQFRGTLKRR 235 >gi|332289497|ref|YP_004420349.1| putative global regulator [Gallibacterium anatis UMN179] gi|330432393|gb|AEC17452.1| putative global regulator [Gallibacterium anatis UMN179] Length = 296 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N I++ G + FLQ +T DV+ + + +A P+GK++ F + K + F Sbjct: 14 LNNYCVIEINGVDSQTFLQGQLTCDVVNMSANSSTLAAHCDPKGKVISLFRLIKFSAEQF 73 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIAD 124 D S + +L Y + S V + ++ S E N D E + AD Sbjct: 74 WFVFDNSLLPLALQQLKKYAVFSKVTFVEKNLHIATFS---EDCLPNDLTTDAEVTTTAD 130 Query: 125 VLLHRTWGHN---------EKIASD-IKTYHELRINHG----IVDPNTDFLPSTIFPHDA 170 L R N E+ S+ + + L I +G +F+P + Sbjct: 131 KTLVRVNAENDFYLLFSESEQAQSEQAEQWKWLNIVNGEPLFTAVAQGEFIPQAL----N 186 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHR 197 L L IS TKGCYIGQE ++R ++R Sbjct: 187 LQHLEQAISFTKGCYIGQETIARAKYR 213 >gi|192361074|ref|YP_001982679.1| hypothetical protein CJA_2216 [Cellvibrio japonicus Ueda107] gi|190687239|gb|ACE84917.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 322 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 56/240 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L N + V G A FLQ IT D+ L + A +P+G++LL F +++ D Sbjct: 15 CHLPNTGLLLVEGPDAAKFLQGQITCDIRELADQKVLLGAQCSPKGRVLLNFYAVQLQPD 74 Query: 64 TFILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 T L + R+ + SL ++F K + + I G+ +SS +D+ Sbjct: 75 TIALRLPRNILEQAQISLGKYIVFSKAKLRKADDAYAIIGL-----------HSSRLDDF 123 Query: 120 FSIADVLLHR--TW-----------------------------GHNEKIASDIKTYHE-- 146 +I + H TW G + + ++T ++ Sbjct: 124 SNILGTIPHEPLTWIDTPQGIIWRLDETHMELWLKSLTALAPLGQSLAEVASLRTENDWN 183 Query: 147 -LRINHGIVDPNTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 +I GI T P T P + + L+NG++ KGCY GQE+V+R+ +R ++ Sbjct: 184 LAQIQRGI----TCITPETYEQFTPQELNLTLVNGVNFRKGCYTGQEIVARLHYRGHAKR 239 >gi|160873993|ref|YP_001553309.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS195] gi|160859515|gb|ABX48049.1| folate-binding protein YgfZ [Shewanella baltica OS195] gi|315266222|gb|ADT93075.1| folate-binding protein YgfZ [Shewanella baltica OS678] Length = 320 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 +L + + + + +L Y + S + +L E S F+ E F Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFLSEHFGDIHQ 139 Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160 AD +L+ +A D + L I G PN Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217 S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257 Query: 218 SPILTDD 224 I +D Sbjct: 258 LEIAMED 264 >gi|238899111|ref|YP_002924793.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259710251|sp|C4K7V2|YGFZ_HAMD5 RecName: Full=tRNA-modifying protein ygfZ gi|229466871|gb|ACQ68645.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 336 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 45/242 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----------- 52 + L++ I+V GK + +LQ IT DV L A P+GKIL Sbjct: 23 ILLNDWGLIRVTGKDRVKYLQGQITLDVPLLKENQHILGAHCDPKGKILSTVRLFHYLKG 82 Query: 53 ------------------LYFLISKIE----EDTFILEI--DRSKRDSLIDKLLFYKLRS 88 Y + SK+E E T +L I D++++ + K F KL + Sbjct: 83 LAFITRKSLLHDELMELRKYAVFSKVEIDIAESTVLLGIAGDQARK---VLKNCFEKLPT 139 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 + + +L ++ + + F D L+ + ++ + + + L Sbjct: 140 ETEPVVHEDDYSLLHFSSPR--ERFLLVSQAFKEGDFLIQKL--QDQAVFRSSEQWLALD 195 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I G P D T F P A + L GIS TKGCY GQEVV+R ++R + +K + Sbjct: 196 IESGF--PIIDAKNKTQFIPQAANLKALGGISFTKGCYTGQEVVARTEYRGVNKKALYWL 253 Query: 208 TG 209 TG Sbjct: 254 TG 255 >gi|321249108|ref|XP_003191342.1| mitochondrion protein [Cryptococcus gattii WM276] gi|317457809|gb|ADV19555.1| Mitochondrion protein, putative [Cryptococcus gattii WM276] Length = 375 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +LS++S +++ G A FL+ + DV Y S L G++L I ++ Sbjct: 7 AHLSHKSVLELSGPDAQKFLKGLSCKDV---EYLGGGYSGFLNASGRVLHTAFIFPRSKN 63 Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQ 106 ++++ E L+ L +KLRS V I ++Q + +W Sbjct: 64 SYLITHESPEDHPAPLLSLLPPFKLRSKVRIKDVTNQWDAWSAWGSDLQGGPHPIRTWKM 123 Query: 107 EHTFSNSSFIDERFSIADVLLH----RTW-----------------GHNEKIAS--DIKT 143 ++ S D I D+ L W G +A+ D+ Sbjct: 124 GSGGASESHWDWEGGIRDLGLRDDEAGCWDLRAGWPRMGRQLLVPKGEKPSLATSHDLGN 183 Query: 144 YHELRINH---GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 H+ ++ G+ + + LP P ++ MD+ G+ KGCY+GQE+ R H Sbjct: 184 VHDYELHRMLLGVPEGPKEILPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 243 Query: 201 RKR 203 RKR Sbjct: 244 RKR 246 >gi|89094638|ref|ZP_01167575.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92] gi|89081108|gb|EAR60343.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92] Length = 338 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 103/253 (40%), Gaps = 37/253 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLISKI 60 + L +Q + V G FLQ +T DV + +RGSA+ +G +L F + K Sbjct: 33 IPLIHQRVLSVKGPDTEKFLQGQLTCDVAEV---FSRGSALGAHCNIKGHMLSLFRLLKA 89 Query: 61 EEDTFILEIDRSKRDSLIDKL----LFYKLR-SNVIIEIQP--INGVVLSWNQEHTFSNS 113 E+ +L + + DS + L +F K S V EI I G E F + Sbjct: 90 GEEEVLLRMSQDIFDSAANNLKKYIVFSKAEASEVSDEISGLGITGPGAEALVEQFFGRA 149 Query: 114 SFIDER-FSIADVLLHRTWGHNEKIASDIKTYHEL-------------------RINHGI 153 D +++ L+ R G+ +I EL I GI Sbjct: 150 PSEDNGILPLSNGLVVRVPGNRFEIWMATAELCELLSKLPDEVSIGSTDAWVLSEIEAGI 209 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTD 211 D + P L+G+S KGCY GQE+V+R+QHR + K+PM I G D Sbjct: 210 PDLR-EATQEAFIPQMTNFQALDGVSFKKGCYTGQEIVTRLQHRGQL-KKPMYLIEVGGD 267 Query: 212 DLPPSGSPILTDD 224 P +G I + D Sbjct: 268 KKPMAGDVITSPD 280 >gi|301155519|emb|CBW14987.1| predicted folate-dependent regulatory protein [Haemophilus parainfluenzae T3T1] Length = 279 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 24/228 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ + Sbjct: 5 ISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGASTLTAHCDPKGKMNSLFRLIKLSTE 64 Query: 64 TFIL--------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 F++ +D K+ ++ K+ F L ++ I G + + + N + Sbjct: 65 QFLILMPKALLAPLDHLKKYAVFSKVTFQVLDWQIVGLIGEKCGRIHAQIELDIDENRAI 124 Query: 116 IDERFSIADVLLHRTWGHNEK--IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + + L T+ +EK + +DI+ + + +F+P + L Sbjct: 125 L-----LNPTPLDVTFNGDEKQWLCADIQA----GLPSLSAETQNEFIPQAL----NLQA 171 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI 220 + IS TKGCYIGQE V+R ++R ++ +++G + P GS I Sbjct: 172 IEQAISFTKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219 >gi|86146368|ref|ZP_01064692.1| hypothetical protein MED222_22346 [Vibrio sp. MED222] gi|85835847|gb|EAQ53981.1| hypothetical protein MED222_22346 [Vibrio sp. MED222] Length = 323 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 45/238 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83 Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104 S IE +E+ K+ ++ K+ + S+V+I + Q I+ + S Sbjct: 84 YALMQPKSAIE-----IELVEIKKYAVFSKVDIEQT-SDVVIGVMGASADQYIDSISESQ 137 Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + S + + D R+++ A+ L+ + EK++ + YHE I+D Sbjct: 138 GKVRVISGGTAVQVSDNRWALLVTQEAAEALVSSS--TAEKVSEALWQYHE------ILD 189 Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247 >gi|307824019|ref|ZP_07654246.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96] gi|307734803|gb|EFO05653.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96] Length = 326 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 35/239 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G A FLQ IT ++ + + A+ P+G+ + FL+ K +D F++ + + Sbjct: 44 LTIAGSDAAKFLQGQITCNINDITDAKSSLGALCNPKGRAITTFLLVKNADD-FLMILPQ 102 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV------ 125 S+ +L Y LRS V + + + L + ++RF+ + Sbjct: 103 ELLASVKKRLQMYVLRSKVTL-TDSSDALCLIGLYDEASQPGEVPEQRFATSSQENIVVN 161 Query: 126 LLHRT------------WGHNEKIA---SDIKTYHELRINHGI----VDPNTDFLPSTIF 166 L +R W K+ D + L I GI + + +F+P + Sbjct: 162 LQNRNLIIAGADNAQGLWEKQVKLGFQPEDSAQWRYLDIISGIPWLTAETSEEFIPQMLN 221 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTD 223 +D L GIS KGCY GQE+V+R + KR M + D L P S I+ D Sbjct: 222 -----LDKLGGISFNKGCYTGQEIVARTHYLGKA-KREMFLAECDALATPEPNSTIIDD 274 >gi|307262639|ref|ZP_07544269.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306872062|gb|EFN03776.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 279 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 LS I++ G A +LQ +T DV K+A G LT P+GK+ + + Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLYRQA 58 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115 D FI I +++L Y + S V E+ PI GV +L+ E+T + Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171 ++ +I WG + +D + + + I GI + N + +P L Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 + N IS +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 220 >gi|308814228|ref|XP_003084419.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri] gi|116056304|emb|CAL56687.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri] Length = 248 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 25/185 (13%) Query: 42 SAILTPQGKILLYFLISKIEEDT------FILEIDRSKRDSLIDK-----LLFYKLRSNV 90 A LTP GKI++ ++ ++ D ++L++D +K D + + L LR Sbjct: 14 GAALTPNGKIVVDAFVAALDGDATRGTGEYVLDVDAAKMDEVRCRRTMKWLRRMSLRKRC 73 Query: 91 IIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----Y 144 ++E + VV+S E + D R A + G K +S + + Sbjct: 74 VVEDAREAFDVVVSTRAEDGLAP----DPRSRTASGVALGFRGVAAKSSSAAREDATFLH 129 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR- 203 RI G+ + + FP + D L+ +S +KGCY+GQE +R + R +RKR Sbjct: 130 ASHRIALGVGEGYEEL--GGTFPLECNFDALDAVSFSKGCYVGQENTARQRFRGAVRKRV 187 Query: 204 -PMII 207 P+++ Sbjct: 188 APVVL 192 >gi|212213082|ref|YP_002304018.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212] gi|212011492|gb|ACJ18873.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212] Length = 258 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 FI V G++A FLQ +T DV + A P+G+++ F + + +D + L + Sbjct: 12 GFILVKGENAATFLQGQLTCDVREINEIRGTLGACCDPKGRMVANFFVFQKNKDYYFL-L 70 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 +S I L Y + S V E+ +N E +S+ ++ L Sbjct: 71 PKSMISITIAHLKKYAVFSKV--ELLAVNEA-----------------ETYSLPEITLKE 111 Query: 130 TWGHNEKIASDIKTYHELRINHGIV--DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 D + L + G+V P T + P + GI+ TKGCYIG Sbjct: 112 L---------DENDWRSLNVRAGLVWVYPQTS---GKLIPQMINLQKWGGINFTKGCYIG 159 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 QE+++R +H +++ + PP+ L + + T+G+VV Sbjct: 160 QEIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND-QTMGIVV 205 >gi|188997079|ref|YP_001931330.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1] gi|188932146|gb|ACD66776.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1] Length = 302 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 29/247 (11%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ I+T +V L K + +L +G + F + K + + +IL+ + RD +++KL Sbjct: 32 FLQGILTNNVAQLNDKEFNYNLMLDHKGSPIWDFYVFK-DNENYILDFEFD-RDEVLNKL 89 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSI---ADVLLHRT------ 130 KL V E+ + + F +F + E+F D+ + Sbjct: 90 KQLKLSYQVFFEVLEFEHIYIFGEDSEKFIQQTFKEAPEKFKYLKSGDIYIANNPLRLGQ 149 Query: 131 -----WGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +G+ E I S++ T + LRIN+ I + + + + Sbjct: 150 KGFDIFGNLESIKSNLPTDLKIDEEEFENLRINNCIPKIGKELIEKVLTLETNIWKY--A 207 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 ISL KGCY+GQE ++R+ R R M+ D++ +L +D +G + V K Sbjct: 208 ISLNKGCYVGQEAIARVYFRG-KPPRVMVKFSFDNILNENEKVLLNDKPVGFITSVNIKD 266 Query: 238 ALAIARI 244 AI I Sbjct: 267 KTAIGFI 273 >gi|113969061|ref|YP_732854.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-4] gi|113883745|gb|ABI37797.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-4] Length = 318 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 27/230 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+ D Sbjct: 24 LSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ-DVL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSF--IDERFS 121 ++ + + + + +L Y + S + +L E F F I E + Sbjct: 83 LMLMPKDTLELDLPQLQKYAVFSKATLSNASDEWTLLGVAGEQAVPFVTQHFGEITEELT 142 Query: 122 I---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS--- 163 + AD + T E D + L I G PN PS Sbjct: 143 LVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGY--PN--LAPSHAN 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILQGTTAL 248 >gi|257386337|ref|YP_003176110.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286] gi|257168644|gb|ACV46403.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286] Length = 362 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ L NG+ KGC++GQEVVSR+ +R KR + +T +P SG+ + DD +G + Sbjct: 244 VVGLANGVDFEKGCFVGQEVVSRVHNRGRPSKRLVGLT-CGAVPESGAAVFVDDASVGAV 302 Query: 231 GVVVG----KKALAIARID 245 V ++ +A+AR+D Sbjct: 303 TRAVESPTREEPIALARVD 321 >gi|293605094|ref|ZP_06687486.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553] gi|292816497|gb|EFF75586.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553] Length = 332 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 45/237 (18%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---EDTFILE--ID 70 G A+ FL +T DV LP AR + T +G++L ++ + +D L + Sbjct: 31 GADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRAAPGADDAPQLYGLVR 90 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFSI------ 122 R ++L+ +L + LR+ V + +N GV S + + R Sbjct: 91 RDLSEALLKRLSMFVLRAKVKLAATGLNVAGVQASAQEAAALEAVTGALPRTPWQRVDLP 150 Query: 123 ---------ADVLLHRTW-GHNEKIASDIKTYHELRINHG--------------IVDPNT 158 AD L W +E++ L + I Sbjct: 151 SGTWIAAPSADARLRWWWIASDEQLQQSSALAGVLSLAPAAHWQVADLAAGIPWIATATQ 210 Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D F+P T+ ++L+ G+S TKGCY GQEVV+R +R +++R + GT + P Sbjct: 211 DVFIPQTVN-----LELVEGVSFTKGCYPGQEVVARSHYRGTVKRR--MAYGTVEQP 260 >gi|59712704|ref|YP_205480.1| folate-dependent regulatory protein [Vibrio fischeri ES114] gi|75353458|sp|Q5E304|YGFZ_VIBF1 RecName: Full=tRNA-modifying protein ygfZ gi|59480805|gb|AAW86592.1| predicted folate-dependent regulatory protein [Vibrio fischeri ES114] Length = 318 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 24/233 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +T DV++L +GK+ F + D + Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFH-HNDGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFIDER 119 L +S ++ + ++ Y + S V I I L W +HT SN++ + Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDEILLGFTGDKALEWINQHTDSNANVRVSK 143 Query: 120 FS----IADV--LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDF-LPST 164 F ++D LL T E++ S D + I H + P D L + Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHAL--PQIDAPLCNE 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 P + +NGIS KGCY GQE V+R ++R I ++ +++G + P Sbjct: 202 HIPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGLSEARPCA 254 >gi|238796535|ref|ZP_04640042.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969] gi|238719513|gb|EEQ11322.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969] Length = 330 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 38/248 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104 E +E RS D+ + +L Y + S V+I QP + GV + Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAAQPETVLLGVAGAQARVALAGLFAELP 138 Query: 105 NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 + EH T + S ERF + A L+ + H + ++ K + L I Sbjct: 139 SAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVDKLADHAQ--LNNSKQWLALDIE 196 Query: 151 HG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G I+D +T + P + LNGIS +KGCY GQE+V+R ++R ++ + Sbjct: 197 AGFPIIDADTS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLA 253 Query: 209 GTDDLPPS 216 G PS Sbjct: 254 GHASRVPS 261 >gi|304411119|ref|ZP_07392735.1| folate-binding protein YgfZ [Shewanella baltica OS183] gi|307301758|ref|ZP_07581516.1| folate-binding protein YgfZ [Shewanella baltica BA175] gi|304350654|gb|EFM15056.1| folate-binding protein YgfZ [Shewanella baltica OS183] gi|306913796|gb|EFN44217.1| folate-binding protein YgfZ [Shewanella baltica BA175] Length = 320 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 42/251 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L + + + + +L Y + S + +L E S F+ E F Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFVSEHFGD--- 136 Query: 126 LLHRTWGHNEKIA----------------------------SDIKTYHELRINHGIVDPN 157 +H+ + E A D + L I G PN Sbjct: 137 -IHQEFTPIEHGAILKDADRFILMLAPEAAAALVAKSKLSVFDASAWQALEITAGY--PN 193 Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-- 214 S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L Sbjct: 194 LAASHASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQIS 253 Query: 215 -PSGSPILTDD 224 SG I +D Sbjct: 254 LESGLEIAMED 264 >gi|302036423|ref|YP_003796745.1| putative aminomethyltransferase [Candidatus Nitrospira defluvii] gi|300604487|emb|CBK40819.1| putative Aminomethyltransferase [Candidatus Nitrospira defluvii] Length = 363 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 56/277 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-------------- 51 LS++ I+V G I +LQ+II+ D+L L R S+ LT +GK+ Sbjct: 48 LSHRGKIRVTGDDRIKWLQSIISNDILPLQPGQGRYSSFLTHKGKMLGYFRVYVSADAVW 107 Query: 52 ------------------LLYFLISKIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNV 90 LLY +K+E E +L + K + ++R+ Sbjct: 108 VEDVGEVGDATFQALRKFLLYGTKAKMENCGESWGLLLVSGPKSAEAVAAAFGIEVRALQ 167 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIASD------- 140 ++ P + Q ++ F + AD + W N+ + S Sbjct: 168 LLHTLP---ATIDGQQALILRTEETGEQDFEVLLPADAV-PAAW--NQLMTSGAPFGIKP 221 Query: 141 --IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ-HR 197 + LRI G+ D L I P +A ++ SL+KGCY GQEVV+R+ + Sbjct: 222 VGTQARELLRIEAGLPKAGPD-LNEEIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYG 279 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 N+ R +I +PP+GS + + D E+G + V Sbjct: 280 NVRRHLVGLIIQDKAVPPAGSKLFSGDREVGWVSSAV 316 >gi|255318647|ref|ZP_05359878.1| glycine cleavage T protein [Acinetobacter radioresistens SK82] gi|262379127|ref|ZP_06072283.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304329|gb|EET83515.1| glycine cleavage T protein [Acinetobacter radioresistens SK82] gi|262298584|gb|EEY86497.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 239 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +TADV L R +AI +G+I +S+ + + F + + + + + Sbjct: 13 GVDAQKFLQGQVTADVERLDSNY-RYTAICDLKGRIHFGLWLSRQDAENFSIVVTQDQSE 71 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 + Y S + E I V S + T RFS D Sbjct: 72 EFAKHIRKYGAFSKMTFE--DIGAVFPSMDNALT---------RFSSED----------- 109 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 +D+ + I G T P + + G+ KGCY+GQE+V+R+ Sbjct: 110 ---TDLNAWQLQAIEQGQA-WITSLTEHEFQPQELRLHQRGGVHYDKGCYLGQEIVARLW 165 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIAR 243 + + ++ G+ P + +L DD+E + ++ V G KAL +A+ Sbjct: 166 FKAKPKHWLHLVQGSGTAPAPAT-LLHDDVEVVNSIAVENGYKALVVAK 213 >gi|241663067|ref|YP_002981427.1| folate-binding protein YgfZ [Ralstonia pickettii 12D] gi|240865094|gb|ACS62755.1| folate-binding protein YgfZ [Ralstonia pickettii 12D] Length = 346 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 89/237 (37%), Gaps = 54/237 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+ Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97 Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103 + +L +L + LR+ V+ E +N V Sbjct: 98 AIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPEAADALREAGAVLPEPDTVNAVA-- 155 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150 Q T R A W H E KT + L + Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQHAWKTLSSRLSLVGTEVWDWLSLQ 214 Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ + F+P + ++LL G+ KGCY GQEVV+R Q+R +++R Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEVVARSQYRGTLKRR 266 >gi|51597485|ref|YP_071676.1| global regulator [Yersinia pseudotuberculosis IP 32953] gi|153946923|ref|YP_001399856.1| global regulator [Yersinia pseudotuberculosis IP 31758] gi|81638623|sp|Q666S2|YGFZ_YERPS RecName: Full=tRNA-modifying protein ygfZ gi|166979590|sp|A7FF28|YGFZ_YERP3 RecName: Full=tRNA-modifying protein ygfZ gi|51590767|emb|CAH22412.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|152958418|gb|ABS45879.1| putative aminomethyltransferase [Yersinia pseudotuberculosis IP 31758] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 40/257 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104 E +E RS D+ + +L Y + S V+I QP + GV S Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 105 NQEH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 + EH NS+ + ERF + A L+ + G + +D K + L I Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSPILTDDIE 226 S P +D+E Sbjct: 255 N----ASRVPAAGEDLE 267 >gi|152999373|ref|YP_001365054.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS185] gi|151363991|gb|ABS06991.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS185] Length = 320 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 +L + + + + +L Y + S + +L E S F+ E F Sbjct: 84 ML-MPKDTIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SLFVSEHFGDIHQ 139 Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160 AD +L+ +A D + L I G PN Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217 S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257 Query: 218 SPILTDD 224 I +D Sbjct: 258 LEIAMED 264 >gi|37521041|ref|NP_924418.1| hypothetical protein glr1472 [Gloeobacter violaceus PCC 7421] gi|35212037|dbj|BAC89413.1| glr1472 [Gloeobacter violaceus PCC 7421] Length = 288 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 32/215 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISK 59 + +LS++ + V GK A +LQ ++T ++ TL P K G A+LT QGK++ +F + + Sbjct: 3 LEGYFLSDRELLSVRGKDAADYLQRVLTCNLKTLQPGKFIPG-ALLTGQGKLVAFFDLYQ 61 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--ID 117 + + L + ++L +L Y +V++E P +VL E S F I Sbjct: 62 QADGGYTLAVPSGCAEALAARLERYVFSEDVVLE--PREAIVL----ELLSSAPPFEPIP 115 Query: 118 ERFSIADVLLHRTWGHNEKIAS-------------------DIKTYHELRINHGIVDPNT 158 E D L +A + + + RI G+ + Sbjct: 116 EPGRYRDFALDGLPARLSTLAPGHYRLELVRMPSEFAPAPLEAERFEAWRIEQGLPAWDK 175 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + L + P + +D IS KGCY GQEV+SR Sbjct: 176 E-LNDNLIPLNLGID--GAISHDKGCYTGQEVISR 207 >gi|238787327|ref|ZP_04631126.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641] gi|238724589|gb|EEQ16230.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641] Length = 327 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEEDT 64 L + + + + G + +LQ +TAD+ LP A +GK+ L + E Sbjct: 25 LDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYRGEGLA 84 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------------NQE 107 FI RS D+ + +L Y + S V+I QP + V+L N E Sbjct: 85 FIER--RSVLDNQLSELKKYAVFSKVVISAQP-DAVLLGVAGDQAQAALTPIFAELPNAE 141 Query: 108 H--------TFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRINHG-- 152 H T + S ERF I + EK+A ++ K + L I G Sbjct: 142 HPVIQQGNSTLLHFSLPTERFLIV-TDSEQAQQIVEKLADSAQLNNSKQWLALDIEAGFP 200 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I+D ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G + Sbjct: 201 IIDADSS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGNAN 257 Query: 213 LPPSG 217 P+ Sbjct: 258 RVPAA 262 >gi|167622662|ref|YP_001672956.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella halifaxensis HAW-EB4] gi|167352684|gb|ABZ75297.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 25/264 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I V G+ F+ +T D+ +L R A P+GK+L F + + DT Sbjct: 24 LTHLGLISVTGEQGRSFIHGQVTTDISSLESDQWRWGAHCDPKGKMLASFR-TFAKGDTL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF---IDERF 120 L + + + +L Y + S + + ++L + Q T+ + F DE Sbjct: 83 FLMMPKETLALDLPQLQKYAVFSKAELSDASDHWLLLGVAGEQAKTWLTAQFGELTDELT 142 Query: 121 SIADVLLHRTWG------HNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164 I + ++ G ++ AS D + L I G PN Sbjct: 143 LIDNGMIIHDAGRFILAIEQDQAASLISAIEQPIYDATAWQALEIAAGY--PNLGANHQG 200 Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 F P + +NGIS KGCY+GQE ++R+++R ++ I++GT P + L Sbjct: 201 QFVPQMCNVQAVNGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSTPLTADSQLEI 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKV 247 +E G G A+ R D+V Sbjct: 261 ALEDGEGFRRAGTIIEAVQRGDQV 284 >gi|121607991|ref|YP_995798.1| glycine cleavage T protein (aminomethyl transferase) [Verminephrobacter eiseniae EF01-2] gi|121552631|gb|ABM56780.1| glycine cleavage T protein (aminomethyl transferase) [Verminephrobacter eiseniae EF01-2] Length = 303 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 25/229 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+V G+ A FL + +T D +L + AR +A L+ +G++ F I D + Sbjct: 11 LSHLGVIRVAGEDAGAFLHSQLTQDFSSLDMRQARLAAFLSAKGRMQASF-IGLRRPDEW 69 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L R + + +L + LR+ + + + + + + +S AD+ Sbjct: 70 LLLCSRDLLPATLARLSMFVLRAKARLTDASADFALYGLAGDTLAAVAGGAQPAWSKADI 129 Query: 126 ----LLHRTWGHNE-----------------KIASDIKTYHELRINHGIVDPNTDFLPST 164 L+H N+ +A+ + + E + G+ ++ + Sbjct: 130 GAASLVHLYPAANQPRALWVAPAGDPPPAGPALATALWLWSE--VASGVATLSSP-VAQV 186 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + + G+S KGCY GQEVV+R Q R +++R I D+ Sbjct: 187 FVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYIAHAEADI 235 >gi|262377511|ref|ZP_06070733.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262307567|gb|EEY88708.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 241 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 40/241 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + + G A FLQ +T + TL R +AI + +G+I + KI ++F + Sbjct: 8 TLFSLNGVDAQKFLQGQVTLNTETLAENQTRYTAICSLKGRIQFGLWLKKISPESFEIVS 67 Query: 70 DRSKRDSLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIAD 124 + L + + F K++ ++ + P ING+ HT D Sbjct: 68 TEDQATELTNHIKKFGAFSKMKLELVGPVYPVINGI-------HT--------------D 106 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKG 183 + T D+ + + I G +T+F P + + GI KG Sbjct: 107 FVATET---------DVTMWEQQAIESG--QAWIQAATATLFQPQELRLHQREGIHYDKG 155 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI-GTLGVVVGKKALAIA 242 CY+GQEV++R+ + + ++ GT P + L +D+EI ++ + G KAL +A Sbjct: 156 CYLGQEVIARLWFKAKPKHWLHLVQGTGAAPDVATK-LNNDVEIVNSIAIENGYKALVVA 214 Query: 243 R 243 + Sbjct: 215 K 215 >gi|167521794|ref|XP_001745235.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776193|gb|EDQ89813.1| predicted protein [Monosiga brevicollis MX1] Length = 364 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 53/237 (22%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARG-------------------- 41 + +++ + V G A+ FLQ + T D+L P+++A Sbjct: 60 VPHRAVLAVRGPEALTFLQGLTTQDLLPQEPEEPFELAEDDADTADTAADSSTAAATHPT 119 Query: 42 ----SAILTPQGKIL---LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI 94 + L +G+IL L + E F E+D L L +KLR+ V + Sbjct: 120 KPLHTMFLHAKGRILCDALAYPTLPTEPRGFYFEVDADMLAPLHKHLRSFKLRTKVSFD- 178 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHG 152 + D ++A +++ T E + S D Y LR+ G Sbjct: 179 --------------ALAPDVIGDPGRTLAALIVPCTL---EPVLSNDDGSIYAYLRLALG 221 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207 + + D + + P +A ++ NG+S KGCY+GQE+ +R + ++RKR PM I Sbjct: 222 LSEGPQDHIDNKSLPLEANIEHWNGVSFKKGCYLGQELTARTHYSGMLRKRLLPMRI 278 >gi|255717402|ref|XP_002554982.1| KLTH0F18326p [Lachancea thermotolerans] gi|238936365|emb|CAR24545.1| KLTH0F18326p [Lachancea thermotolerans] Length = 480 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R G++D DF P T+ P + D L N +S KGCY+GQE+ +R I+RKR Sbjct: 300 RFESGLIDGLEDFRPETLLPLELNFDFLPNAVSFDKGCYVGQELTARTFSTGILRKR 356 >gi|119943855|ref|YP_941535.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas ingrahamii 37] gi|119862459|gb|ABM01936.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas ingrahamii 37] Length = 325 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 36/247 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + V G+ I FLQ +T D+ L +A PQGK+ F + + D Sbjct: 21 LTSWDLLSVTGEDRITFLQGQLTCDLTILKPGEQTLAAQCNPQGKVWSIFRVV-VLNDRI 79 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFIDER 119 +L +S + +L Y S V I ++ + G + N F+ S+ +E Sbjct: 80 LLIQPKSVTAKQLPELQKYATFSKVEIKKETEYQLLGLAGCKSAANIAKNFNISATHEES 139 Query: 120 FSIAD---VLLHRTW-----------GHNEKIASDIKT---------YHELRINHGI--V 154 + D V++ + + ++ D+K ++ + I GI + Sbjct: 140 HLLDDDQGVIIKQPYPSLRYLMIVKNQQATQLTEDLKDQASVYDDSLWNAMNIAAGIAFI 199 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDL 213 + T L P + LNGIS TKGCYIGQE ++R ++R ++ I+TG + Sbjct: 200 EEETSGL---FIPQMLNLQALNGISFTKGCYIGQETIARTKYRGANKRALFILTGRATEA 256 Query: 214 PPSGSPI 220 P +G + Sbjct: 257 PKAGQNV 263 >gi|238763222|ref|ZP_04624187.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638] gi|238698495|gb|EEP91247.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638] Length = 330 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 40/257 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ L + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------INGVVLSW 104 E FI R+ D+ + +L Y + S V+I QP + G+ Sbjct: 80 GEGLAFIER--RNVLDNQLRELKKYAVFSKVVIAAQPDAALLGVAGAQAKTALAGIFAEL 137 Query: 105 -NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149 + EH T + S ERF + A L+ + ++ +D K + L I Sbjct: 138 PDAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVEKL--SDQAQLNDSKQWLALDI 195 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 196 EAGFPIIDTDN-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSPILTDDIE 226 + S P +D+E Sbjct: 255 S----ASRVPTAGEDLE 267 >gi|120612067|ref|YP_971745.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax citrulli AAC00-1] gi|120590531|gb|ABM33971.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax citrulli AAC00-1] Length = 304 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 24/219 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ ++ + Sbjct: 11 LNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRVGDAEV 70 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQEHT 109 +L R ++ +L + LR+ + + + W+++ T Sbjct: 71 LLVCSRDVLAPVLKRLSMFVLRAKARLTDATADFALWGLAGDAVAAVAGEALPPWSRQDT 130 Query: 110 FSNSSF-IDERFSIADVLLHRTWGH----NEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + + A LL + G +A + + E + G+ T L Sbjct: 131 PQGTVVHLYPGAGQARALLAQPTGQPAPSGPALAPGLWEWGE--VQSGVAT-LTAPLVEL 187 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P + + G++ KGCY GQEVV+R Q R +++R Sbjct: 188 FVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 226 >gi|212637154|ref|YP_002313679.1| glycine cleavage T protein [Shewanella piezotolerans WP3] gi|212558638|gb|ACJ31092.1| Glycine cleavage T protein (aminomethyl transferase) [Shewanella piezotolerans WP3] Length = 340 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 40/259 (15%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------L 56 +LS+ + V G+ F+ +T D+ +L + R A P+GK+L F L Sbjct: 40 HLSHLGLMSVTGEQGRSFIHGQVTTDISSLEAEQWRWGAHCDPKGKMLATFRTFAKGDTL 99 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEH 108 + + T L++ + ++ ++ K + +I + SW N E Sbjct: 100 FMLMPKQTLALDLPQLQKYAVFSKAELTDVSEQWLI-LGVAGEQAASWLTAKFGELNAEL 158 Query: 109 TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDF 160 T ++ + ++RF V++ ++ + +D+ + L G PN Sbjct: 159 TLIDNGMVIQDNDRFI---VVIEQSKVDTANLLADVSLFDATAWQALETLAGY--PNIGA 213 Query: 161 LPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 S F P + ++GIS KGCY+GQE ++R+++R ++ I++GT S Sbjct: 214 AHSAQFVPQMCNLQAIDGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTV------SA 267 Query: 220 ILTDDIEIGTLGVVVGKKA 238 +LTD+ L + +G+ A Sbjct: 268 VLTDE---SVLEIALGEGA 283 >gi|157870281|ref|XP_001683691.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126757|emb|CAJ05212.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 368 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 74/348 (21%), Positives = 125/348 (35%), Gaps = 84/348 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIEE 62 L ++ ++V G A FLQ I T D+ L + L G++L + ++ E Sbjct: 11 LPSRRILRVRGTDAHDFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQVHE 70 Query: 63 DTFILEIDRSKRDS--LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------- 111 + +D +R + L+D L K+R V I+ VVL+ +E + Sbjct: 71 GQASILVDVHERSATELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSADAQRSRDSAS 130 Query: 112 ---------------------NSSFIDER------------------------FSIADVL 126 F+D R F + + Sbjct: 131 GCDARESSVTSLSPETLEERHTECFLDPRNDALFPRPPPPSSSSPPAAVTSPSFCLRKCV 190 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + TW S +Y L + GI + F + P + +D L G+S KGCY+ Sbjct: 191 VPATWA---PPLSSPDSYTTLLYSRGIGEGPDVFKCNKSLPFEGNLDFLKGVSFHKGCYV 247 Query: 187 GQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDD--------------------I 225 GQE+ R + RKR + + G ++ P + I+TD+ Sbjct: 248 GQELTHRTHVMLVTRKRTVPLHFGPANVDPPAAGIITDEGAVTKTWPVEVGEPLYSAARE 307 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 +IG + V G+ + + R+ VD A L + G V+ P W+ Sbjct: 308 KIGEVTGVCGQVGIGLFRLRYVDKATHTVPGLQLKDGTPVQTHLPDWW 355 >gi|299768868|ref|YP_003730894.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1] gi|298698956|gb|ADI89521.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1] Length = 240 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + KI ++F + + + + + Sbjct: 13 GIDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINPESFEIVVAQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + + S + + Q G V N + FS + + ++ + W Sbjct: 73 EFAKHIKKFGAFSKMTLSEQ---GAVFPKFVNHQTEFSTTETDISEWQKQAIMTGQAWIT 129 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 T HE + P + + G++ KGCY+GQE+V+R Sbjct: 130 Q-------ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT + P S + L +DIE+ G L +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDIEVVNSIANDQGYLALVVAKPA 216 >gi|237755923|ref|ZP_04584514.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691922|gb|EEP60939.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 302 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 29/247 (11%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FLQ I+T ++ L K + +L +G + F + K + + +IL+ + RD + +KL Sbjct: 32 FLQGILTNNIAQLNDKEFNYNLMLDHKGSPIWDFYVFK-DNENYILDFE-CDRDEVFNKL 89 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFS--------IADVLLH--- 128 KL V E+ + + + F +F + ERF IA+ L Sbjct: 90 KQLKLSYQVFFEVLELEHIYIFGEDSEKFIQQTFNEVPERFKYLKSENIYIANNPLRLGQ 149 Query: 129 ---RTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +G+ E I S + T + LRIN+ I + L + P + + Sbjct: 150 KGFDIFGNLESIKSSLPTDLKIDEGKFENLRINNCIPKIGKE-LVEKVLPLETNI-WKYA 207 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 ISL KGCY+GQE ++R+ R R M+ D+ +L +D +G + V K Sbjct: 208 ISLNKGCYVGQEAIARVYFRG-KPPRVMVKFSFDNALDENEKVLLNDKPVGFITSVNIKD 266 Query: 238 ALAIARI 244 AI I Sbjct: 267 KTAIGFI 273 >gi|218710580|ref|YP_002418201.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32] gi|254814153|sp|B7VK90|YGFZ_VIBSL RecName: Full=tRNA-modifying protein ygfZ gi|218323599|emb|CAV19849.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32] Length = 323 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 45/238 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83 Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104 S IE + ++EI + S +D + S+V+I + Q I+ + S Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKVD----IEQTSDVVIGVMGASADQYIDSISESQ 137 Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + S + + D R+++ + L+ + EK++ + YHE I+D Sbjct: 138 GKVRVISGGTAVQVSDNRWALLVTQEATEALVSSS--TAEKVSEALWQYHE------ILD 189 Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247 >gi|94500782|ref|ZP_01307311.1| aminomethyl transferase, putative [Oceanobacter sp. RED65] gi|94427104|gb|EAT12085.1| aminomethyl transferase, putative [Oceanobacter sp. RED65] Length = 294 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 40/256 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISK 59 + S +++ ++ + G + F+Q T D+ ++ RG A +G+++ F +S Sbjct: 4 LQSYSINDCDYLIIQGPDSAKFMQGQFTCDINQATSHQFLRG-ACCNAKGRMVASFDLSL 62 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFID 117 I++D ++L + + D L + L Y + I V +N H T +NS + Sbjct: 63 IDKDQYLLVMAKGLADILQNHLKKYAVFFKAEI-------VKKQFNAYHFDTITNSD-LT 114 Query: 118 ERFS---IADVLLHRTWGHNE-----KIASDI-------------KTYHELRINHGI--V 154 E FS + L+ R G N ++++D + + RI G+ V Sbjct: 115 EDFSQSRTGERLIKR-QGFNAGFDVIQLSADASGIDATVNVKQPSQDVNLARIQAGLARV 173 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 P T + P + L NG+S KGCY GQE+V+R+Q+ + KR + Sbjct: 174 TPET---SEELIPQMLNLQLTNGVSFKKGCYTGQEIVARMQYLGKL-KRHCYRVAFNQAA 229 Query: 215 PSGSPILTDDIEIGTL 230 G + D IGTL Sbjct: 230 EVGDSLFAGDKSIGTL 245 >gi|300704089|ref|YP_003745691.1| aminomethyl transferase [Ralstonia solanacearum CFBP2957] gi|299071752|emb|CBJ43076.1| putative aminomethyl transferase [Ralstonia solanacearum CFBP2957] Length = 346 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 116/297 (39%), Gaps = 61/297 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL + +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLDQARLAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GVVLS---- 103 L+ D+ +L +L + LR+ +++P++ G VL Sbjct: 93 LQTDKLIAPALTRRLTMFVLRAKA--KLRPMDEFIAITVAGPDAADALREAGAVLPDTEA 150 Query: 104 ----WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT------------YHE 146 Q T R A W H E KT + Sbjct: 151 VYTVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDW 210 Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 L + G+ + F+P + ++L+ G+ KGCY GQEVV+R Q+R +++ Sbjct: 211 LGLQAGVPSITLSTQEQFVPQMVN-----LELVGGVDFRKGCYPGQEVVARSQYRGTLKR 265 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI 251 R M + +G+ + ++ G+VV G L ++D +D AI Sbjct: 266 R-MQRAHVNAPTSAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSAI 321 >gi|52424309|ref|YP_087446.1| hypothetical protein MS0254 [Mannheimia succiniciproducens MBEL55E] gi|52306361|gb|AAU36861.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 277 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 15/209 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++L+ I++ G + FLQ +T DV L + +A P+GK+ F + ++ ++ Sbjct: 5 IHLTQYKLIELTGVDSEKFLQGQLTCDVTKLKTGDSTLTAHCDPKGKVSSVFRLIRVAQE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERF 120 F L + +D+L Y + S V E+Q + GV+ FS S ++ Sbjct: 65 QFYLLFRTDLLPAGLDQLKKYAVFSKVAFAEPEVQ-LAGVI--GENCGQFSASFVVNS-- 119 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGI 178 A +L++ +++ E++ + I+ T +F+P + L + + Sbjct: 120 GNAAILINPAERLEFNASAEAWDCVEIQRGYPILSAKTQNEFIPQAL----NLQCIEQAV 175 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 S KGCYIGQE V+R ++R KR M I Sbjct: 176 SFQKGCYIGQETVARAKYRG-TNKRAMFI 203 >gi|294142438|ref|YP_003558416.1| glycine cleavage system T protein [Shewanella violacea DSS12] gi|293328907|dbj|BAJ03638.1| glycine cleavage system T protein, putative [Shewanella violacea DSS12] Length = 326 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 35/239 (14%) Query: 3 SVYLSNQS---FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 S++ SN S + V G+ F+ +T D+ +L R A P+GK+L F Sbjct: 18 SLFFSNLSHLGLMSVTGEQGRSFIHGQVTTDISSLQSDQWRWGAHCDPKGKMLASFRTFS 77 Query: 60 IEEDTFI--------LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 +E+ F+ L++ + + ++ K + N ++ + +W E S Sbjct: 78 LEDTLFMMMPADILALDLPQLAKYAVFSKADLVDVTDNFLL-LGVAGEQAKTWIDERFGS 136 Query: 112 -NSSFIDERFSIAD------------VLLHRTWGH------NEKIASDIKTYHELRINHG 152 N++ ID+ ++ +++ T +++I D + L I G Sbjct: 137 DNNTSIDKEVTVISGGLLLKDNDRFIIMMEETAAALLLTSISQEIV-DATAWQALEIQSG 195 Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 PN + F P + +NGIS KGCY+GQE ++R+++R ++ I++GT Sbjct: 196 Y--PNLAASHQSQFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGT 252 >gi|16331555|ref|NP_442283.1| hypothetical protein slr0635 [Synechocystis sp. PCC 6803] gi|1001622|dbj|BAA10353.1| slr0635 [Synechocystis sp. PCC 6803] Length = 312 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 6/147 (4%) Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L+++ WGH I D + LRI G + L P +A L IS TKGCY Sbjct: 167 LVNQLWGHLPLINPD--QWESLRIYQGRPQAGKE-LTEDYNPLEA--GLWRAISFTKGCY 221 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 IGQE ++R+ +++R IT D +G+ I + ++G L V G L + Sbjct: 222 IGQETIARLNTYQGVKQRLWRIT-LDRQAEAGTVITLEGQKVGILTSVKGLTGLGYLKTK 280 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHWY 272 VD + + + V H Y Sbjct: 281 LVDQGMTVQLGEAIATVEKPPYLSHQY 307 >gi|294669214|ref|ZP_06734294.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308846|gb|EFE50089.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 323 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 31/240 (12%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 I+V G+ FL ++ + L A + TP+G+++ L+ ED +L Sbjct: 46 GLIRVSGEDRASFLHGQLSNHIEGLAEGEACYATYNTPKGRVIANMLVFNRGEDL-LLLT 104 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFSIADVLL 127 ++L +L + LR+ + E P G N+ + + F+++D L+ Sbjct: 105 AADLVEALCKRLRMFVLRAKAVFEPLPGYGAAGRLNEGAPALPAAEPHLSFPFAVSDGLI 164 Query: 128 HRTWGHN--------------EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 T H + A + HE+R + + T + Sbjct: 165 ECTLPHGGILLAGEKDTLPAYDAEAENAWQLHEIRSGYPWISEATK--------ESCVAQ 216 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +LN G+ KGCY GQE+++R Q+R +++ ++ G+ L +G +L D E G Sbjct: 217 MLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLLGS-SLEAAGIAVLQDGAEAG 275 >gi|323336892|gb|EGA78150.1| Iba57p [Saccharomyces cerevisiae Vin13] Length = 516 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 >gi|189220194|ref|YP_001940834.1| aminomethyltransferase [Methylacidiphilum infernorum V4] gi|189187052|gb|ACD84237.1| Predicted aminomethyltransferase [Methylacidiphilum infernorum V4] Length = 398 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 27/205 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS Q+ ++ G+ I +L + AD+ +LP A +A L +G++ I+ E F Sbjct: 127 LSGQAIWRISGRDRIKYLNGQLPADIASLPPGCALQTAALNRKGRMDCELWIAHHPEFLF 186 Query: 66 I---LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------NSSF 115 + EI+ + L L+ K + I+ + G + H FS + F Sbjct: 187 VDCPKEIEEATEKRLTSFLVADK------VTIEKLGGQFYLY---HYFSPDPPKGFSFCF 237 Query: 116 IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 ++RF I DV R LR+ + I + +T+ AL Sbjct: 238 QNKRFGIPGWDVWSERRLEDFGCPEVPPGVQESLRLENMIPRWGKELTSNTL----ALEA 293 Query: 174 LL--NGISLTKGCYIGQEVVSRIQH 196 L + IS TKGCY+GQE++SRI H Sbjct: 294 FLSKDSISFTKGCYVGQEIISRIHH 318 >gi|123443583|ref|YP_001007556.1| putative global regulator [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166979589|sp|A1JPM8|YGFZ_YERE8 RecName: Full=tRNA-modifying protein ygfZ gi|122090544|emb|CAL13413.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 330 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 42/250 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ L + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104 E FI RS D+ + +L Y + S V+I QP + V+L Sbjct: 80 GEGLAFIER--RSVLDNQLSELKKYAVFSKVVIAAQP-DAVLLGVAGTQAKAVLAEVFAE 136 Query: 105 --NQEH--------TFSNSSFIDERFSIADVLLHRTWGHN---EKIA-----SDIKTYHE 146 N +H T S ERF +L+ T EK+A ++ K + Sbjct: 137 LPNADHPVVQQGDSTLLYFSLPAERF----LLVTDTEQAQQLVEKLADRAQFNNSKQWLA 192 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 L I G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ Sbjct: 193 LDIEAGFPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYW 251 Query: 207 ITGTDDLPPS 216 + G+ + P+ Sbjct: 252 LAGSANRAPA 261 >gi|207343770|gb|EDZ71127.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 241 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 61 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 120 >gi|332528358|ref|ZP_08404358.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella gracilis ATCC 19624] gi|332042229|gb|EGI78555.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella gracilis ATCC 19624] Length = 317 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 42/245 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++ G+ A FLQ+ +T D L AR +A + QG++ F+ K+ D +L + Sbjct: 17 LRASGEEATKFLQSQLTNDFALLGANQARFAAFCSAQGRMQASFIGVKLAADDILLVCSQ 76 Query: 72 SKRDSLIDKLLFYKLRSNVIIE---------------IQ---PINGVVLS-WNQEHTFSN 112 + + +L + LR+ V + +Q P G + + W + Sbjct: 77 DLLERTLKRLSMFVLRAKVKLSDATASFALYGLAGDAVQAHTPGAGALPAPWTCQSVNDE 136 Query: 113 SSFI--------DERFSIADVLLHRTWGHNEK--IASDIKTYHELRINHGIVDPNT--DF 160 + I D+R + A L T E +A + + E+ +V T F Sbjct: 137 TRLIHLHPAVKGDDRAARALWLAPATTPAPEATALAHEDWLWGEVLSGVAMVSAPTFEAF 196 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR------PMIITGTDDLP 214 +P + + + GI+ KGCY GQEVV+R Q R I++R P+ ++ D+ Sbjct: 197 VPQMLN-----YESIEGINFKKGCYPGQEVVARSQFRGAIKRRALRVRSPVALSAGQDIF 251 Query: 215 PSGSP 219 + +P Sbjct: 252 DAAAP 256 >gi|6322582|ref|NP_012656.1| Iba57p [Saccharomyces cerevisiae S288c] gi|1352922|sp|P47158|CAF17_YEAST RecName: Full=Putative transferase CAF17, mitochondrial; AltName: Full=57 kDa iron-sulfur cluster assembly factor for biotin synthase- and aconitase-like mitochondrial proteins; AltName: Full=CCR4-associated factor 17; Flags: Precursor gi|1015847|emb|CAA89653.1| CAF17 [Saccharomyces cerevisiae] gi|151945187|gb|EDN63438.1| ccr4 associated factor [Saccharomyces cerevisiae YJM789] gi|190409594|gb|EDV12859.1| hypothetical protein SCRG_03773 [Saccharomyces cerevisiae RM11-1a] gi|256273115|gb|EEU08070.1| Iba57p [Saccharomyces cerevisiae JAY291] gi|259147585|emb|CAY80836.1| Iba57p [Saccharomyces cerevisiae EC1118] gi|285813009|tpg|DAA08907.1| TPA: Iba57p [Saccharomyces cerevisiae S288c] Length = 497 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 >gi|323347833|gb|EGA82095.1| Iba57p [Saccharomyces cerevisiae Lalvin QA23] Length = 497 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 >gi|254581046|ref|XP_002496508.1| ZYRO0D01738p [Zygosaccharomyces rouxii] gi|238939400|emb|CAR27575.1| ZYRO0D01738p [Zygosaccharomyces rouxii] Length = 451 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRN 198 D + LR G VD D+ ++ P + D L N +S KGCYIGQE+ +R Sbjct: 273 DPAFFRRLRFEQGYVDSVQDYTAESLLPLELNFDFLPNAVSADKGCYIGQELTARTFATG 332 Query: 199 IIRKR--PMIITGTDDLP-PSG 217 I+RKR P+ + ++ P P G Sbjct: 333 ILRKRLVPVTLFNPENYPLPQG 354 >gi|225022191|ref|ZP_03711383.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii ATCC 33806] gi|224945124|gb|EEG26333.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii ATCC 33806] Length = 335 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K++ D F Sbjct: 26 SHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVK-DAFY 84 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTFSNS 113 L+I +SL+D L S V I E+ + G + Sbjct: 85 LDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFGAWVRH 144 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD--AL 171 R ++ DV E + + Y R+ G+ + + D +I PH+ AL Sbjct: 145 DVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDLDDKSI-PHEVPAL 201 Query: 172 M---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILT 222 + + + + L KGCY GQE V+R+++ + + P ++T LP G+PI+ Sbjct: 202 INRGERIAAVHLDKGCYRGQETVARVEN---LGRPPRLLTLVHLDGSAPTLPTPGTPIV- 257 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDH 249 +G G++ + RI V H Sbjct: 258 -------MGPATGRQR-TVGRIGTVIH 276 >gi|113867578|ref|YP_726067.1| aminomethyltransferase [Ralstonia eutropha H16] gi|113526354|emb|CAJ92699.1| Aminomethyltransferase [Ralstonia eutropha H16] Length = 338 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 +L+ G++ KGCY GQE+V+R Q+R +++R ++ G ++P + I + G+ Sbjct: 223 ELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGEGEVPAPAAEIYRPEDPGQPCGM 282 Query: 233 VV--------GKKALAIARIDKVDHAIKKGMA 256 +V G LA +ID A++ G A Sbjct: 283 IVNAAPAPQGGWAGLAELKIDAAASALRLGSA 314 >gi|94986226|ref|YP_605590.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus geothermalis DSM 11300] gi|94556507|gb|ABF46421.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus geothermalis DSM 11300] Length = 298 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 50/273 (18%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S +++ G + F+Q +T D+ P A L +G+I + K E D + L + Sbjct: 8 SALRLTGADRVDFVQGQMTNDLRGAPTPGMVACAFLNVRGQIEFFARAYKREGDVY-LHL 66 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPING-----------VVLSWN------QEHTFSN 112 D + + L +L Y + V E+Q + V WN Q + Sbjct: 67 DAGQAEGLAARLRRYIIFDQV--ELQDLTAELRTVHVWGGQAVPGWNVGGGDAQVFELGS 124 Query: 113 SSFIDERFSI---ADVLLHRTWGHNEKIASDIKTYHEL--------RINHGIVDPNTDFL 161 ++ + R + A + LH ++ + + EL R+ GI D D Sbjct: 125 AAVLAGRVNRTGEAGLDLHYLARAEAEVLAALGG-EELPLAMLDLARVRAGIPDVTRDGF 183 Query: 162 PSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 T+ P + +D+ L+ IS KGCY+GQE+++R++ R R ++G Sbjct: 184 VGTL-PQEVGLDVGGPLSAISYRKGCYVGQEIMARLEARGNARYHLARLSGE-------- 234 Query: 219 PILTDDIEIGTLGVVVGKK-----ALAIARIDK 246 L D E+ G VVG+ L++AR+ K Sbjct: 235 -ALPDHAEVTREGRVVGQAGLCAGGLSLARLRK 266 >gi|91794306|ref|YP_563957.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella denitrificans OS217] gi|91716308|gb|ABE56234.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella denitrificans OS217] Length = 318 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 31/235 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +++ LS+ I++ G+ A F+ +T D++++ + R A P+GK++ F I + Sbjct: 17 INAARLSHFGMIEITGEQAKTFINGQVTTDIISMTDEEWRWGAHCDPKGKMIASFRIFLL 76 Query: 61 EE--------DTFILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS 111 E T L++ + K+ ++ K + S I+ + V L + Sbjct: 77 GERLLMLMPKSTLALDLAQLKKYAVFSKAELTDVSDSWAILGLWGEKSVDLMTQHFGELT 136 Query: 112 NSSFIDERFSI---------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 E+ +I A++ + + E +A K + L I G P Sbjct: 137 QGLTATEQGAILKDNFGFMAILPQEQANIFIEQ--AKLELVAH--KAWQALEIAAGY--P 190 Query: 157 NTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 N D S + P + +NGIS TKGCY+GQE ++R+++R ++ I+ GT Sbjct: 191 NIDSQHSGQYVPQMCNLQAVNGISFTKGCYMGQETIARMKYRGGNKRALYILEGT 245 >gi|88812335|ref|ZP_01127585.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus mobilis Nb-231] gi|88790342|gb|EAR21459.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus mobilis Nb-231] Length = 339 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 47/285 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A FL + ++ D+ +L AR +A +G+ L + + + Sbjct: 40 LSDWGVIHVHGADAAAFLHSQLSNDIQSLDTANARLAAYCNAKGRALALLRVLRTDAG-L 98 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQEHT 109 +L ++ DSLI +L + LRS V ++ P+ ++ S ++ Sbjct: 99 LLFTHKALTDSLIRRLRMFVLRSKVTLDDVSEAIGVIGLVGAAARPPLQRLMGSLPEQVG 158 Query: 110 FSNSS---------FIDERFS--IADVLLHRTWGH--NEKIASDIKTYHELRINHGI--V 154 ++ + +RF+ + LL W N + + L I GI + Sbjct: 159 GVQNADEIRLIRLDCVPDRFALVVPGRLLPELWARLANTLPVVSSEAWRLLEIRAGIPTI 218 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213 P T P ++ L GIS +KGCY GQEV++R+ + +++R + T T Sbjct: 219 TPATQ---EAFVPQMLNLEPLQGISYSKGCYPGQEVIARMHYLGKLKRRMYRLHTQTATA 275 Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKA-------LAIARIDKVDH 249 P G + T E GT VV +A LA+ RI+ + Sbjct: 276 PAPGEIVRAGTGGQEAGT--VVTAAQATPESCELLAVLRIELAEQ 318 >gi|163802948|ref|ZP_02196835.1| hypothetical protein 1103602000581_AND4_13813 [Vibrio sp. AND4] gi|159173238|gb|EDP58066.1| hypothetical protein AND4_13813 [Vibrio sp. AND4] Length = 322 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 39/233 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N S I + G P+LQ +T DV++L + A +GK+ F + D + Sbjct: 26 LDNLSMITMVGDDKKPYLQGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFH-HNDGY 84 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIAD 124 + +S D + ++ Y + S V IE N VVL E+ +FI I D Sbjct: 85 AMLQPKSAIDVELKEIKKYAVFSKVTIE--ESNDVVLGVAGENA---EAFISSLNAEIGD 139 Query: 125 V----------------LLHRTWGHNEKIASDIK---TYHELRINHGI--------VDPN 157 V LL T + + + + T +EL I D Sbjct: 140 VRAIKGGTAVKVAPSRWLLALTAESAQSLVASSQATLTTNELWTRFDIEAALPYVAADAQ 199 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 D +P + + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 200 NDHIPQALN-----LQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247 >gi|326331984|ref|ZP_08198269.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1] gi|325950122|gb|EGD42177.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1] Length = 319 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 25/239 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ +++ G + +L ++ + L + IL+PQG + +F S +++ Sbjct: 44 VDLSHRDVVRIAGPDRLTWLHSLTSQAFEGLAPGAWTSALILSPQGHVEHFF--SGVDDG 101 Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 T F+ + +L+D L K S+V + ++ V Q ++F + E+++ Sbjct: 102 TAFLAWTEPGAGSALVDYLERMKFWSDVTVTLETSQASVWRPAQGYSFVPRESL-EKYAA 160 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLN-- 176 A A + LRI G VD + +P+ + D+ Sbjct: 161 A-----------AGPACGFWAFEALRIERGEPRFGVDTDARTIPNEVGWVPGAADVAGPE 209 Query: 177 -GISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ +R ++ + G+++ LP +GS ++ + +G +G Sbjct: 210 YAVHLDKGCYRGQETVARVHTLGRPPRRLVLLHLDGSENRLPVAGSELVFGEKTVGFVG 268 >gi|305680339|ref|ZP_07403147.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium matruchotii ATCC 14266] gi|305659870|gb|EFM49369.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium matruchotii ATCC 14266] Length = 363 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K++ D F Sbjct: 54 SHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVK-DAFY 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTFSNS 113 L+I +SL+D L S V I E+ + G + Sbjct: 113 LDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFGAWVRH 172 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD--AL 171 R ++ DV E + + Y R+ G+ + + D +I PH+ AL Sbjct: 173 DVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDLDDKSI-PHEVPAL 229 Query: 172 M---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILT 222 + + + + L KGCY GQE V+R+++ + + P ++T LP G+PI+ Sbjct: 230 INRGERIAAVHLDKGCYRGQETVARVEN---LGRPPRLLTLVHLDGSAPTLPTPGTPIV- 285 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDH 249 +G G++ + RI V H Sbjct: 286 -------MGPATGRQR-TVGRIGTVIH 304 >gi|219871845|ref|YP_002476220.1| putative GCV family glycine cleavage complex aminomethyltransferase [Haemophilus parasuis SH0165] gi|219692049|gb|ACL33272.1| possible GCV family glycine cleavage complex aminomethyltransferase [Haemophilus parasuis SH0165] Length = 296 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 36/238 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V L+ I+V G A +LQ +T DV K+A G LT P+GK+ F + Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVA----KLAVGEQSLTCHCDPKGKMSALFRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EI-QPING-----VVLSWNQEHTFS 111 + + F L I + + +L Y + S V E+ Q + G ++ +N+ T Sbjct: 72 RATAEQFFLIIQQDLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT-- 129 Query: 112 NSSFIDERFSIADVLLHRTWGH-NEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPH 168 + ++DE A WG + D + ++ + I G+ + F + P Sbjct: 130 -ACYLDEEPKRAIF-----WGDIVVETNGDSRLWNLIDIQQGVPLLYKANQF---ELIPQ 180 Query: 169 DALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSPI 220 + LL+ IS TKGCYIGQE V+R ++R KR M + G +LP S I Sbjct: 181 ATNLQLLDKAISFTKGCYIGQETVARAKYRG-ANKRAMFTFVGNVEGEIELPAIASSI 237 >gi|83748620|ref|ZP_00945639.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551] gi|207723529|ref|YP_002253928.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum MolK2] gi|207743121|ref|YP_002259513.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum IPO1609] gi|83724744|gb|EAP71903.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551] gi|206588730|emb|CAQ35693.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum MolK2] gi|206594518|emb|CAQ61445.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum IPO1609] Length = 346 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 52/241 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GVVLS---- 103 L+ D+ +L +L + LR+ +++P++ G VL Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKA--KLRPMDEFIAITVAGPDAADALREAGAVLPDTEA 150 Query: 104 ----WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT------------YHE 146 Q T R A W H E KT + Sbjct: 151 VYTVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDW 210 Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 L + G+ + F+P + ++L+ G+ KGCY GQEVV+R Q+R +++ Sbjct: 211 LGLQAGVPSITLSTQEQFVPQMVN-----LELVGGVDFRKGCYPGQEVVARSQYRGTLKR 265 Query: 203 R 203 R Sbjct: 266 R 266 >gi|309782013|ref|ZP_07676743.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA] gi|308919079|gb|EFP64746.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA] Length = 346 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 54/237 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+ Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97 Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103 +L +L + LR+ V+ E +N V Sbjct: 98 LIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVNAVA-- 155 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150 Q T R A W H E KT + L + Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRQRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLSLQ 214 Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ + F+P + ++LL G+ KGCY GQE+V+R Q+R +++R Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEIVARSQYRGTLKRR 266 >gi|156839684|ref|XP_001643530.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM 70294] gi|156114145|gb|EDO15672.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM 70294] Length = 502 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + R+ +GI+D DF TI+P + D LN ++ KGCY+GQE+ +R+ I+RK Sbjct: 319 FRSYRLKNGIIDSVRDFRSETIWPLELNFDFFLNSVNPDKGCYLGQEITTRMFSTGILRK 378 Query: 203 R 203 R Sbjct: 379 R 379 >gi|326316630|ref|YP_004234302.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373466|gb|ADX45735.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC 19860] Length = 304 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 22/218 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ + + Sbjct: 11 LNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRAGDAEV 70 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLS-WNQEHT 109 +L R +++ +L + LR+ + + + G L W+++ T Sbjct: 71 LLVCSRDVLATVLKRLSMFVLRAKARLSDATADFALWGLAGDTVAAVAGEALPPWSRQDT 130 Query: 110 FSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPN-TDFLPSTI 165 + + LL + G + + + G+ P T L Sbjct: 131 PQGTVVHLHPGAGQPRALLAQPAGQPAPAGPALAPGLWEWGEVQSGV--PTLTAPLVELF 188 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P + + G++ KGCY GQEVV+R Q R +++R Sbjct: 189 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 226 >gi|223041896|ref|ZP_03612082.1| hypothetical protein AM202_0492 [Actinobacillus minor 202] gi|223017312|gb|EEF15737.1| hypothetical protein AM202_0492 [Actinobacillus minor 202] Length = 295 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 31/235 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 + LS I++ G A +LQ +T DV K+A G LT P+GK+ + Sbjct: 16 CILLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAVGEHTLTSHCDPKGKMSALLRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGV----VLSWNQEHTFSN 112 + E + F I + + +L Y + S V + + G+ +L+ QE++ + Sbjct: 72 RAEAERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGITDFELLAKCQENSTAL 131 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDA 170 S ++ +I WG ++ + + I G I+ F + P A Sbjct: 132 SLTQGQKRAI-------VWGEELAPNAEAALWDLMDIQDGLPILLKENQF---ELIPQAA 181 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPI 220 L + N IS TKGCYIGQE V+R ++R ++ + G DLP + I Sbjct: 182 NLQAVENAISFTKGCYIGQETVARAKYRGANKRAMFTLVGEVAEKVDLPQPATSI 236 >gi|320582648|gb|EFW96865.1| Mitochondrial matrix protein [Pichia angusta DL-1] Length = 458 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 139 SDIKTYHE----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 DIK HE LR GI + +DF T+ P + +D +NGI+ KGCY+GQE+ R Sbjct: 257 EDIKVGHEVYDTLRTLVGISEI-SDFKSETL-PFENNLDYMNGINYNKGCYVGQELTIRT 314 Query: 195 QHRNIIRKRPMII 207 H +IRKR M I Sbjct: 315 FHSGVIRKRVMPI 327 >gi|289209042|ref|YP_003461108.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix] gi|288944673|gb|ADC72372.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix] Length = 348 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 30/248 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ ++V G A FLQ D+ + ++ S+ +P+G+ F + + D++ Sbjct: 43 LSHRGLLEVRGDDATEFLQGQFGNDITQVDASHSQISSYSSPKGRAYAVFRVLRTA-DSY 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS-----SFID 117 +LE+ + +++ +L + LR++V+IE I+ + + E +N+ + +D Sbjct: 102 LLEMPADRIEAIAKRLRMFVLRAHVVIERADDSHIHFGLSGPDAESELNNALGVCPANVD 161 Query: 118 ERFSIADVLLHRTWGHNEKIA-----SDIKT-YHELRINHGIVDPNT----DFLP----- 162 + V + R G + + ++T + +L + G V P D L Sbjct: 162 DVVEKDGVTVVRVNGVHPRFELFGELEPMRTAWDKLNVRSGPVGPREWALLDILAGMPTV 221 Query: 163 ----STIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216 S +F P + L I+ KGCY GQEVV+R+ + +++R + PP Sbjct: 222 VEATSELFVPQMLNLHALGAINFEKGCYPGQEVVARMHYLGKLKRRMFRLAIHAAEPPQP 281 Query: 217 GSPILTDD 224 GSP+ D Sbjct: 282 GSPVYRAD 289 >gi|187928513|ref|YP_001899000.1| folate-binding protein YgfZ [Ralstonia pickettii 12J] gi|187725403|gb|ACD26568.1| folate-binding protein YgfZ [Ralstonia pickettii 12J] Length = 346 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 54/237 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+ Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97 Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103 +L +L + LR+ V+ E +N V Sbjct: 98 LIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVNAVA-- 155 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150 Q T R A W H E KT + L + Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLSLQ 214 Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ + F+P + ++LL G+ KGCY GQE+V+R Q+R +++R Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEIVARSQYRGTLKRR 266 >gi|319941082|ref|ZP_08015418.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis 3_1_45B] gi|319805439|gb|EFW02241.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis 3_1_45B] Length = 322 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N + I+V G+ A FL T + L + + +P+G+ LL + + + D +L Sbjct: 19 NTALIRVTGEDARHFLHGQFTQKIENLAGRTTL-AGYCSPKGR-LLAVMRAWLSGDAVML 76 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER------- 119 + + + +L Y LRS V E+ P ++++ +E + ++ E Sbjct: 77 ALPAEMAEGFLKRLHMYVLRSKVSFEVVDPAPAMLIAVGEEGAKTLAALGLEMPAHGVCI 136 Query: 120 ----FSIADVLLHRT------WGHNE-------KIASDIKTYHE-------LRINHGI-- 153 F++ + +T G K A+D I+ GI Sbjct: 137 EKDGFTLLGIEPSQTVPGFCAGGARALVILPAGKTAADFGLTPAPAAWALASSISAGIPQ 196 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 V P T T P ++L++G+S +KGCY GQEVVSR+QH +R + Sbjct: 197 VLPPTR---ETFVPQAVNLELVDGVSFSKGCYPGQEVVSRLQHLGETNRRAAV 246 >gi|166712290|ref|ZP_02243497.1| hypothetical protein Xoryp_12755 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 290 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/290 (22%), Positives = 109/290 (37%), Gaps = 52/290 (17%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 19 QYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLL 78 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADVLLH 128 + +L + LR + I + F+ F ER A L Sbjct: 79 PDGNAAEIAAQLGRFVLRRKLKISTAAL------------FAFGGFAAPERARAAQADLG 126 Query: 129 RTWGHNEKIASDIKT---------YHELRINHGIVDPNTDFL-----------------P 162 ++I D+ + Y E + I P+ D Sbjct: 127 -----TQRIVLDLGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARLVEGQR 181 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 P +D L S+ KGCY GQE+V+R H KR + + TD +G + Sbjct: 182 EQWTPQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAM 240 Query: 223 DDIEIGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269 D IGT+ V G ALA+ ++ D ++ G HG R +A P Sbjct: 241 DGAAIGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 286 >gi|238752998|ref|ZP_04614457.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380] gi|238708786|gb|EEQ01045.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380] Length = 327 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 40/257 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP+ A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPHDRHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------- 104 E +E RS ++ +++L Y + S V I QP V+L Sbjct: 80 GEGLAFIE-RRSVLNNQLNELKKYAVFSKVAIAAQP-EAVLLGIAGAEAKTALAQIFAEL 137 Query: 105 -NQEH--------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRI 149 N EH T + S ERF +A L+ + G + ++ + + L I Sbjct: 138 PNAEHPVIQQGDSTLLHFSQPAERFLLVTDAELAQQLVEKLAGSAQ--LNNSQQWLALDI 195 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + D + + P + L+GIS +KGCY GQE+V+R ++R ++ + G Sbjct: 196 EAGLPIIDAD-ISAQFIPQATNIQALDGISFSKGCYTGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSPILTDDIE 226 S P+ +D+E Sbjct: 255 N----ASRVPVAGEDLE 267 >gi|261379095|ref|ZP_05983668.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685] gi|269144476|gb|EEZ70894.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685] Length = 287 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 34/240 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ L+ +D +L + Sbjct: 11 VRVSGEDRQSFLHGQLSNDINHLQSGQACYATYNTPKGRVIANMLVINRGDD-LLLAMSE 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFS---NSSFIDERFSIADV 125 +S + +L + LR+ V+ EI P N G L+ + E + N +F ++ S Sbjct: 70 DLTESTVKRLRMFVLRAKVVFEI-PDNYGVGAELAESAEPLAAREPNLAFAAQQDSDGIC 128 Query: 126 LLHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + G +IA + HE+R + + T A+ Sbjct: 129 SIALPHGGILRIAPETALPPYDAAAESAWKLHEIRSGYPWICAATK--------ETAVAQ 180 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLAADGEEAG 239 >gi|163749105|ref|ZP_02156355.1| hypothetical protein KT99_19729 [Shewanella benthica KT99] gi|161331175|gb|EDQ02064.1| hypothetical protein KT99_19729 [Shewanella benthica KT99] Length = 297 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 32/227 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------LISKIEED 63 + V G+ F+ +T D+ +L R A P+GK+L F LI + D Sbjct: 1 MSVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFALEDALIMMMPSD 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFS- 121 T L++ + + ++ K + ++ + +W N+ ++++ ID+ + Sbjct: 61 TLALDLTQLAKYAVFSKADLVDVTDKFLL-LGVAGEQAQAWVNERFGPADNTSIDKEVTV 119 Query: 122 IADVLLHRTWGH-----------------NEKIASDIKTYHELRINHGIVDPNTDFLPST 164 IA LL + N++I D + L I G PN + Sbjct: 120 IAGGLLLKDNDRFIIVMDKEAAAPLLTSINQEIV-DATAWQALEIQSGY--PNLAASHQS 176 Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 F P + +NGIS KGCY+GQE ++R+++R ++ I++GT Sbjct: 177 KFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGT 223 >gi|240948853|ref|ZP_04753209.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305] gi|240296668|gb|EER47279.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305] Length = 295 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 31/235 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 + LS I++ G A +LQ +T DV K+A G LT P+GK+ + Sbjct: 16 CILLSQYRLIEIAGIDAEKYLQGQLTCDV----SKLAIGEHTLTSHCDPKGKMSALLRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVV----LSWNQEHTFSN 112 + E + F I + + +L Y + S V + + GV L+ QE++ + Sbjct: 72 RAEAERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGVTDFERLAKQQENSTAL 131 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDA 170 + ++ +I WG +D + + I G I+ F + P A Sbjct: 132 ALTQGQKRAI-------VWGEEFAPNADTTLWDLMDIQDGLPILLKANQF---ELIPQAA 181 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220 L + N IS TKGCYIGQE V+R ++R ++ + G DLP + I Sbjct: 182 NLQAVENAISFTKGCYIGQETVARAKYRGANKRAMFTLVGKVAEEVDLPQPATSI 236 >gi|33596201|ref|NP_883844.1| hypothetical protein BPP1557 [Bordetella parapertussis 12822] gi|33601612|ref|NP_889172.1| hypothetical protein BB2635 [Bordetella bronchiseptica RB50] gi|33573204|emb|CAE36859.1| conserved hypothetical protein [Bordetella parapertussis] gi|33576049|emb|CAE33128.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 338 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 11/69 (15%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGTDDLPPS 216 F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R +I DLP Sbjct: 214 FIPQTVN-----LDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVIAEAPADLP-- 266 Query: 217 GSPILTDDI 225 P+ DI Sbjct: 267 -DPLAGQDI 274 >gi|33592903|ref|NP_880547.1| hypothetical protein BP1845 [Bordetella pertussis Tohama I] gi|33572551|emb|CAE42131.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332382316|gb|AEE67163.1| hypothetical protein BPTD_1822 [Bordetella pertussis CS] Length = 338 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 11/69 (15%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGTDDLPPS 216 F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R +I DLP Sbjct: 214 FIPQTVN-----LDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVIAEAPADLP-- 266 Query: 217 GSPILTDDI 225 P+ DI Sbjct: 267 -DPLAGQDI 274 >gi|164663221|ref|XP_001732732.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966] gi|159106635|gb|EDP45518.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966] Length = 289 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 24/171 (14%) Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-- 113 LI E + ++E+D+ LI + +KLRS I N V +W+ + N+ Sbjct: 8 LIPYAREPSILVEVDKCISTDLIAFVKRFKLRSKFQI-----NDVSDAWDVMQLYGNAQV 62 Query: 114 -----------SFIDERFSIAD--VLLHRTWGHNE---KIASDIKTYHELRINHGIVDPN 157 +F D R VLL + E K A+D+ Y R+ G+ + + Sbjct: 63 DLDMLNLYGAYAFRDVRSPEMGWRVLLPKKHTEQEIPLKNATDVD-YTIHRMLQGVPEGS 121 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + + P ++ +D ++G+ KGCYIGQE+ +R ++RKR M I+ Sbjct: 122 KEIHMGSSLPLESCIDYMHGVDFRKGCYIGQELTARTFFTGLVRKRIMPIS 172 >gi|324519008|gb|ADY47260.1| Transferase caf-17 [Ascaris suum] Length = 186 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 10/135 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +D Y E R+ GIV+ + + +A DL++G+S KGCY+GQE+ +R R Sbjct: 48 ADASLYEERRLEFGIVEGGIETRGALPVYRNA--DLMHGMSDNKGCYLGQEMTARTL-RA 104 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDD-IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 I+KR ++ T D G + D +G + V G + LA+ R+D+ D + L Sbjct: 105 AIKKR--VLPFTCDGAAKGRVMDPDGYTNMGEVLVCNGHRGLALLRLDQGDVS----RCL 158 Query: 258 TVHGVRVKASFPHWY 272 V ++ P W+ Sbjct: 159 KAGDVDIRPFVPSWW 173 >gi|294657445|ref|XP_459753.2| DEHA2E10318p [Debaryomyces hansenii CBS767] gi|218511960|sp|Q6BPW7|CAF17_DEBHA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|199432698|emb|CAG87991.2| DEHA2E10318p [Debaryomyces hansenii] Length = 462 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 34/56 (60%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R +G+ + S++ P + +DL NG+SL KGCY+GQE+ R + IIRKR Sbjct: 271 RFMNGLFETQDSPKESSLLPFEMNLDLTNGLSLEKGCYVGQELTIRTYNNGIIRKR 326 >gi|116689916|ref|YP_835539.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia HI2424] gi|116648005|gb|ABK08646.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia HI2424] Length = 344 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 96 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92 +L + + + ++ +L + LR+ V + Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEP 214 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|84623846|ref|YP_451218.1| hypothetical protein XOO_2189 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58426529|gb|AAW75566.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367786|dbj|BAE68944.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 290 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 186 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAMDGAA 244 Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269 IGT+ V G ALA+ ++ D ++ G HG R +A P Sbjct: 245 IGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 286 >gi|170728217|ref|YP_001762243.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908] gi|169813564|gb|ACA88148.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908] Length = 320 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + V G+ F+ +T D+ +L R A P+GK+L F + + F Sbjct: 23 LSHMGLMSVTGEQGRSFIHGQVTTDISSLESNQWRWGAHCDPKGKMLASFRTFSVADALF 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP---INGVVLSWNQEHTFSNSSFIDERFS 121 ++ + + + + +L Y + S ++++ I GV QE + I + + Sbjct: 83 MM-MPKDTLAADLPQLAKYAVFSKADLVDVSADWTILGVAGEQAQEWVNNYFGEITQELT 141 Query: 122 --IADVLLHRTW--------GHNEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164 VLL +E + S I T + L I G+ PN Sbjct: 142 EIPGGVLLKDGERFIIIIENAPSEPLLSSINTPIQESSAWQALEIQAGL--PNLGVSHQG 199 Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 F P + +NGIS KGCY+GQE ++R+++R ++ I++GT Sbjct: 200 QFVPQMCNVQAINGISFKKGCYMGQETIARMKYRGGNKRALYILSGT 246 >gi|188576489|ref|YP_001913418.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520941|gb|ACD58886.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 268 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAMDGAA 222 Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269 IGT+ V G ALA+ ++ D ++ G HG R +A P Sbjct: 223 IGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 264 >gi|294651372|ref|ZP_06728690.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822727|gb|EFF81612.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 240 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 36/233 (15%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T V L +R +AI +G+I I KI ++F L + + + Sbjct: 13 GVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQDQAE 72 Query: 76 SLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + F K++ I ++ P +NG+ +++ T N+ + I + + Sbjct: 73 EFAKHIRKFGAFSKMKLEEIGQVFPTVNGIQTEFSKSETDINA------WQIQAIQSGQA 126 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 W + T+ L P + + G+ KGCY+GQE+ Sbjct: 127 W----------------------ITQTTEHL---FQPQELRLHQREGVHFDKGCYLGQEI 161 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 V+R+ + + +I G + PP + + D + ++ G AL +A+ Sbjct: 162 VARLWFKAKPKHWLHLIQGKETTPPPATQLNKDVEVVNSIAFEGGYIALVVAK 214 >gi|126175700|ref|YP_001051849.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS155] gi|125998905|gb|ABN62980.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS155] Length = 320 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 +L + + + + +L Y + S + ++ E S F+ E F Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLIGVAGEQA---SLFVSEHFGDIHQ 139 Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160 AD +L+ +A D + L I G PN Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEIIAGY--PNLAAS 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217 S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257 Query: 218 SPILTDD 224 I +D Sbjct: 258 LEIAMED 264 >gi|229588983|ref|YP_002871102.1| hypothetical protein PFLU1454 [Pseudomonas fluorescens SBW25] gi|229360849|emb|CAY47707.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 313 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 19/154 (12%) Query: 87 RSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 R++ +I ++ G W EH + S + ER AD+ NE + I Sbjct: 130 RTDALIAVRVSPGRAELWAPAEHADTVRSQLTERLQQADL--------NEWLLGQI---- 177 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 178 --RAGIGQVMPQTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232 Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 ++ ++P G+P+ + VV+ KA Sbjct: 233 RLSLNATEMPAPGTPLFSPSHNSAIGEVVIAAKA 266 >gi|225631230|ref|ZP_03787922.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591076|gb|EEH12266.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 182 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 25/193 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114 + T +LE + +I+KL L++ + ++I+ ++ GV+ + S S Sbjct: 61 GKYT-LLECENIHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117 Query: 115 -FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIF 166 F D R H+ G H ++I D Y ++RI + + D D + ++ F Sbjct: 118 IFQDPR--------HKLLGMRIIHKDEIKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSF 169 Query: 167 PHDALMDLLNGIS 179 P L+D +NGIS Sbjct: 170 PLQFLVDKVNGIS 182 >gi|159899967|ref|YP_001546214.1| glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC 23779] gi|159893006|gb|ABX06086.1| Glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC 23779] Length = 327 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 9/102 (8%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D TYH LR+ G P + L P +A +L + +S KGCYIGQE+++R+ R Sbjct: 190 DRPTYHTLRVEAGY--PALNELNEEFIPLEA--NLWDAVSFNKGCYIGQEIIARMDSRGR 245 Query: 200 IRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 + K+ + ++G ++P + + + + GTL VV AL Sbjct: 246 LAKKLQGLGLSGAVEVPAT---LTKNGQDAGTLTSVVWSPAL 284 >gi|53723621|ref|YP_103082.1| hypothetical protein BMA1427 [Burkholderia mallei ATCC 23344] gi|76811846|ref|YP_333840.1| glycine cleavage T-protein (aminomethyl transferase) [Burkholderia pseudomallei 1710b] gi|121598474|ref|YP_993237.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei SAVP1] gi|124386525|ref|YP_001029318.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei NCTC 10229] gi|126441510|ref|YP_001059318.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 668] gi|134277134|ref|ZP_01763849.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 305] gi|166998741|ref|ZP_02264595.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20] gi|167893846|ref|ZP_02481248.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 7894] gi|167902296|ref|ZP_02489501.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei NCTC 13177] gi|167910537|ref|ZP_02497628.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 112] gi|167918564|ref|ZP_02505655.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei BCC215] gi|217421508|ref|ZP_03453012.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 576] gi|226197475|ref|ZP_03793052.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] gi|254178469|ref|ZP_04885124.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei ATCC 10399] gi|254179463|ref|ZP_04886062.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655] gi|254189150|ref|ZP_04895661.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei Pasteur 52237] gi|254197345|ref|ZP_04903767.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei S13] gi|254200028|ref|ZP_04906394.1| folate-binding protein YgfZ [Burkholderia mallei FMH] gi|254206362|ref|ZP_04912714.1| folate-binding protein YgfZ [Burkholderia mallei JHU] gi|254262077|ref|ZP_04953131.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a] gi|254297344|ref|ZP_04964797.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 406e] gi|254358223|ref|ZP_04974496.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280] gi|262193312|ref|YP_001080745.2| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei NCTC 10247] gi|52427044|gb|AAU47637.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|76581299|gb|ABA50774.1| Glycine cleavage T-protein (aminomethyl transferase) [Burkholderia pseudomallei 1710b] gi|121227284|gb|ABM49802.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei SAVP1] gi|124294545|gb|ABN03814.1| folate-binding protein YgfZ [Burkholderia mallei NCTC 10229] gi|126221003|gb|ABN84509.1| folate-binding protein YgfZ [Burkholderia pseudomallei 668] gi|134250784|gb|EBA50863.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 305] gi|147749624|gb|EDK56698.1| folate-binding protein YgfZ [Burkholderia mallei FMH] gi|147753805|gb|EDK60870.1| folate-binding protein YgfZ [Burkholderia mallei JHU] gi|148027350|gb|EDK85371.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280] gi|157808043|gb|EDO85213.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 406e] gi|157936829|gb|EDO92499.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei Pasteur 52237] gi|160699508|gb|EDP89478.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei ATCC 10399] gi|169654086|gb|EDS86779.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei S13] gi|184210003|gb|EDU07046.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655] gi|217395250|gb|EEC35268.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 576] gi|225930854|gb|EEH26864.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] gi|243065095|gb|EES47281.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20] gi|254220766|gb|EET10150.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a] gi|261835038|gb|ABO04361.2| folate-binding protein YgfZ [Burkholderia mallei NCTC 10247] Length = 348 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92 +L + + + ++ +L + LR+ + Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ + +I R D L ++++ + + ++R Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 218 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207 I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273 Query: 208 TGTD 211 GTD Sbjct: 274 AGTD 277 >gi|237812642|ref|YP_002897093.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346] gi|237505565|gb|ACQ97883.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346] Length = 348 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92 +L + + + ++ +L + LR+ + Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ + +I R D L ++++ + + ++R Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSATVWDWLDVRAGEP 218 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207 I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273 Query: 208 TGTD 211 GTD Sbjct: 274 AGTD 277 >gi|146078890|ref|XP_001463632.1| hypothetical protein [Leishmania infantum JPCM5] gi|321399563|emb|CBZ08750.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 390 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 22/151 (14%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y L + GI + F + P + +D L G+S KGCY+GQE+ R + RKR Sbjct: 227 YTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKR 286 Query: 204 --PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIA 242 P+ PP+ G P+ + E IG + V G+ + + Sbjct: 287 TVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVGEPLYSAAKEKIGEVTGVCGQVGIGLF 346 Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 R+ VD A + L + G V++ P W+ Sbjct: 347 RLRYVDKATRTVPGLQLQDGTPVQSHLPDWW 377 >gi|322436415|ref|YP_004218627.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9] gi|321164142|gb|ADW69847.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9] Length = 324 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 L + +KGCY+GQE+V RI R + + T DLPP+G+P+ D+ +G Sbjct: 216 LRALHFSKGCYLGQEIVERINSRGAVHRTFAGFLLTGDLPPAGTPLTADEKPVG 269 >gi|53719070|ref|YP_108056.1| hypothetical protein BPSL1434 [Burkholderia pseudomallei K96243] gi|238563338|ref|ZP_00439040.2| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4] gi|52209484|emb|CAH35436.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|238520913|gb|EEP84369.1| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4] Length = 317 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 10 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 69 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92 +L + + + ++ +L + LR+ + Sbjct: 70 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 128 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ + +I R D L ++++ + + ++R Sbjct: 129 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 187 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207 I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 188 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 242 Query: 208 TGTD 211 GTD Sbjct: 243 AGTD 246 >gi|167823758|ref|ZP_02455229.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 9] Length = 341 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92 +L + + + ++ +L + LR+ + Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ + +I R D L ++++ + + ++R Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 218 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207 I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273 Query: 208 TGTD 211 GTD Sbjct: 274 AGTD 277 >gi|328949863|ref|YP_004367198.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM 14884] gi|328450187|gb|AEB11088.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM 14884] Length = 330 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 13/126 (10%) Query: 148 RINHGIVDPNTDFLPSTI--FPHD-ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 R+ GI D LP + P + L DL + KGCY+GQE+++R++ R +R+R Sbjct: 211 RVERGIPD-----LPEALGRLPQEVGLEDL---VHPGKGCYLGQEIMARLEARGNVRRRL 262 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 M + ++ PSG+ + + +G +G VV L + + A++ G + V GV Sbjct: 263 MGLR-LGEVVPSGAEVTHEGRAVGQVGTVVRSPRLGAVALAVLGKALEPGDRVEVGGVAA 321 Query: 265 K-ASFP 269 + A+ P Sbjct: 322 EVAALP 327 >gi|169794833|ref|YP_001712626.1| hypothetical protein ABAYE0658 [Acinetobacter baumannii AYE] gi|213157840|ref|YP_002320638.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057] gi|215482380|ref|YP_002324562.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii AB307-0294] gi|301345760|ref|ZP_07226501.1| hypothetical protein AbauAB0_05935 [Acinetobacter baumannii AB056] gi|301511540|ref|ZP_07236777.1| hypothetical protein AbauAB05_08168 [Acinetobacter baumannii AB058] gi|301596697|ref|ZP_07241705.1| hypothetical protein AbauAB059_12802 [Acinetobacter baumannii AB059] gi|332852287|ref|ZP_08434092.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150] gi|332870510|ref|ZP_08439274.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113] gi|169147760|emb|CAM85623.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|213057000|gb|ACJ41902.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057] gi|213986407|gb|ACJ56706.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii AB307-0294] gi|332729417|gb|EGJ60757.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150] gi|332732247|gb|EGJ63515.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113] Length = 240 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + K ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 L + Y S + + Q G V N FS++ + ++ + W Sbjct: 73 ELAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 IA T HE + P + + G++ KGCY+GQE+V+R Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT D P + L +D+E+ G + +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216 >gi|127514126|ref|YP_001095323.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella loihica PV-4] gi|126639421|gb|ABO25064.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella loihica PV-4] Length = 322 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 31/230 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------LI 57 LS+ I V G+ A F+ +T D+ +L R A P+GK+L F L+ Sbjct: 24 LSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCDPKGKMLASFRTFAHQDALL 83 Query: 58 SKIEEDTFILEIDRSKR----------DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107 + +T L++ + ++ D+ D LF + I G + + E Sbjct: 84 MMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFGVSGEQALAWIAQAFGEIAA---E 140 Query: 108 HTFSNSSFI---DERFSIA---DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 T I ER+ IA D ++ I D + + I G+ PN Sbjct: 141 LTEIPGGVILRDGERYIIAVKCDTQAELLAKIDQPI-YDFSAWQAIEIAAGL--PNLYAR 197 Query: 162 PSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + F P + ++GIS TKGCY+GQE V+R+++R ++ I+ G+ Sbjct: 198 HQSQFVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRALYIVQGS 247 >gi|149245367|ref|XP_001527181.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|158514322|sp|A5DXC3|CAF17_LODEL RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|146449575|gb|EDK43831.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 513 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 29/41 (70%) Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 S++ P + +D +NG+SL KGCY+GQE+ R + IIRKR Sbjct: 310 SSLLPFECNLDYINGLSLDKGCYVGQELTIRTYNNGIIRKR 350 >gi|320163245|gb|EFW40144.1| hypothetical protein CAOG_00669 [Capsaspora owczarzaki ATCC 30864] Length = 388 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 W ++ S + Y + R G+ + + F +T FP ++ + LNG+ KGCY+GQE+ Sbjct: 309 WATLGRLGS-LGEYDDRRYALGLAEGVSGFRFATSFPLESNFERLNGVHFNKGCYLGQEL 367 Query: 191 VSRIQHRNIIRKR 203 R R + RKR Sbjct: 368 THRSHSRGVTRKR 380 >gi|322499496|emb|CBZ34569.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 391 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 22/151 (14%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y L + GI + F + P + +D L G+S KGCY+GQE+ R + RKR Sbjct: 228 YTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKR 287 Query: 204 --PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIA 242 P+ PP+ G P+ + E IG + V G+ + + Sbjct: 288 TVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVGEPLYSAAKEKIGEVTGVCGQVGIGLF 347 Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 R+ VD A + L + G V++ P W+ Sbjct: 348 RLRYVDKATRTVPGLQLKDGTPVQSHLPDWW 378 >gi|241764590|ref|ZP_04762606.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN] gi|241365953|gb|EER60579.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN] Length = 304 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + I+V G+ A FL +T D L + AR +A L+P+G++ F+ K Sbjct: 11 LPHLGVIRVEGEDAAKFLHGQLTQDFALLDLQHARLAAFLSPKGRMQASFIGFKCSATEV 70 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124 +L R + +L + LR+ + + + S + ++ AD Sbjct: 71 LLICSRDLLAPTLKRLSMFVLRAKARLSDASADYALYGLAGSAIESVAGGAQPAWTKADF 130 Query: 125 -----VLLHRTWGHNEKI-------------ASDIKTYHELRINHGIVD---PNTD-FLP 162 V L+ G I D + + G+ P D F+P Sbjct: 131 GAATVVHLYPALGQPRAIWVAPATEPAPAGATLDTALWQWSDVQSGVATLTAPVVDAFVP 190 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + + ++G++ KGCY GQEVV+R Q R +++R I Sbjct: 191 QMLN-----YESVDGVNFKKGCYPGQEVVARSQFRGTLKRRAYI 229 >gi|15837670|ref|NP_298358.1| hypothetical protein XF1068 [Xylella fastidiosa 9a5c] gi|9106015|gb|AAF83878.1|AE003943_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 305 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 14/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + +++ G + F A ++D L SA LTP+G++ F + + E+ Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQDLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121 +L + + + +L Y R V I ++ I T + ++ +D Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERDLITTGTYDTPVHATGTQAAQLDGITELD 153 Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174 ++ + L R T ++ + + + G+ P D + P +D Sbjct: 154 VSGITLPRRLLLVPTAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVA 270 Query: 235 GKKALAIARID 245 ALA+ ID Sbjct: 271 EGLALAVLPID 281 >gi|167855722|ref|ZP_02478478.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755] gi|167853178|gb|EDS24436.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755] Length = 296 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 42/241 (17%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58 V L+ I+V G A +LQ +T DV K+A G LT P+GK+ F + Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVA----KLAVGEQSLTCHCDPKGKMSALFRLY 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EI-QPING-----VVLSWNQEHTFS 111 + + F L I ++ + +L Y + S V E+ Q + G ++ +N+ T Sbjct: 72 RATAEQFFLIIQQNLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT-- 129 Query: 112 NSSFIDERFSIADVLLHRT--WGHNEKIAS-DIKTYHELRINHGI---VDPNT-DFLPST 164 + ++DE RT WG A+ D + + I G+ N + +P Sbjct: 130 -ACYLDEE-------PKRTIFWGDIAVEANGDGSLWDLIDIQQGVPLLYKANQFELIPQA 181 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSP 219 L L IS TKGCYIGQE V+R ++R KR M + G +LP S Sbjct: 182 T----NLQQLDKAISFTKGCYIGQETVARAKYRG-ANKRAMFTFVGNVEGEIELPAVASS 236 Query: 220 I 220 I Sbjct: 237 I 237 >gi|238795222|ref|ZP_04638807.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909] gi|238725442|gb|EEQ17011.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909] Length = 330 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 36/255 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------- 104 E +E RS D+ + +L Y + S V I QP + V+L Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVTIAAQP-DAVLLGIAGAQAKAALAEVFAEL 137 Query: 105 -NQEHTFS---NSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINH 151 + EH + NS+ + LL +++ + + K + L I Sbjct: 138 PSAEHPVTQQGNSTLLHFSLPAERFLLVTDAEQAQQLVATLADRAQFNNSKQWLALDIEA 197 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 198 GLPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGA- 255 Query: 212 DLPPSGSPILTDDIE 226 S P +D+E Sbjct: 256 ---ASRVPAAGEDLE 267 >gi|289665881|ref|ZP_06487462.1| hypothetical protein XcampvN_23092 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 268 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLDTDSAVEAGDAVAMDGTT 222 Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269 IGT+ V G ALA+ ++ D ++ G +G R +A P Sbjct: 223 IGTVVSVAGTLALAVLPLELTLDADATLQAG----AYGARPRAIMP 264 >gi|238921204|ref|YP_002934719.1| hypothetical protein NT01EI_3346 [Edwardsiella ictaluri 93-146] gi|259710250|sp|C5BAS5|YGFZ_EDWI9 RecName: Full=tRNA-modifying protein ygfZ gi|238870773|gb|ACR70484.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 331 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%) Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +D + L I GI +PN D FLP + + L GIS TKGCY GQE+V+R Sbjct: 186 ADSAQWLALDIESGIPLIDEPNCDSFLPQAVN-----LQALGGISFTKGCYSGQEMVARA 240 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++R R+ + G+ + P S +D+E+ Sbjct: 241 KYRGANRRALFWLRGSAERLPHAS----EDLEL 269 >gi|289669030|ref|ZP_06490105.1| hypothetical protein XcampmN_11172 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 268 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLDTDSAVEAGDAVAMDGTT 222 Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269 IGT+ V G ALA+ ++ D ++ G +G R +A P Sbjct: 223 IGTVVSVAGTLALAVLPLELTLDADATLQAG----AYGARPRAIMP 264 >gi|254247996|ref|ZP_04941317.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184] gi|124872772|gb|EAY64488.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184] Length = 344 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 96 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92 +L + + + ++ +L + LR+ V + Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPIVSPAVWDWLDVRAGEP 214 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 270 GETDNVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|325917570|ref|ZP_08179770.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937] gi|325536204|gb|EGD08000.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937] Length = 289 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 25/253 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 15 LHDMQYVRLVGTDAVAFAHAQFANDVQALEIGQWQWNAWLTAKGRVIAIFALLREDDTQV 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEHTFSNSSFID---ER 119 ++ + K D + +L + R + IN LS Q + + D +R Sbjct: 75 LMLLPDGKADEIAAQLGRFVFRRKL-----KINATRLSAYGGFQAPDLAKGAHADIGTQR 129 Query: 120 FSI--ADVLLHRTW--GHNEKIASDIK------TYHELRINHGIVD-PNTDFLPSTIFPH 168 ++ + RT + +A+ I+ + ++ G+V P+ T P Sbjct: 130 IALDMGSAAVPRTLLIFSADALAAPIELPNMDAQWRRADLHLGLVRLPDAQREQWT--PQ 187 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +D L S+ KGCY GQE+V+R H KR + + T+ +G + D IG Sbjct: 188 QLALDRLQAFSVKKGCYPGQEIVART-HFLGKAKRALQLLETEAAVQAGDSVELDGAAIG 246 Query: 229 TLGVVVGKKALAI 241 T+ V G ALA+ Sbjct: 247 TVVSVAGDLALAV 259 >gi|71275603|ref|ZP_00651888.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Dixon] gi|71899500|ref|ZP_00681657.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|170729587|ref|YP_001775020.1| hypothetical protein Xfasm12_0376 [Xylella fastidiosa M12] gi|71163494|gb|EAO13211.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Dixon] gi|71730720|gb|EAO32794.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|167964380|gb|ACA11390.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 267 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 28/253 (11%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +++ G + F A ++D L SA LTP+G++ F + + E+ +L + Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSSFIDER 119 + + +L Y R V I ++ P++ + Q F + +D Sbjct: 61 DGEAVMMAPQLQRYIFRRKVQIAVERNLITTATYDTPVHA---TGTQAAQFDGITELD-- 115 Query: 120 FSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALM 172 ++ + L R ++ + + + G+ P D + P + Sbjct: 116 --VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGL 171 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + Sbjct: 172 DWLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSTEGDIGQVAS 230 Query: 233 VVGKKALAIARID 245 V ALA+ ID Sbjct: 231 VAEGLALAVLPID 243 >gi|262369241|ref|ZP_06062569.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315309|gb|EEY96348.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 240 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 33/245 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + I G A+ FLQ +T +V L + +AI +G+I ++K Sbjct: 1 MSDLAFSSFTLI---GVDALKFLQGQVTVNVEALAENTTQYTAICDLKGRIHFGLWLTKR 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + F + + + + + + S + +E P+ V ++ Q+ T +F E Sbjct: 58 NPEHFEIVTTQDQSEEFAKHIKKFGAFSKMKLE--PVGSVFPTFTQDRT----TFSAE-- 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGI 178 +DI + I HG +D + + + P + + G+ Sbjct: 110 -----------------PTDIAAWQVQAITHGEAFIDQSIEHM---FQPQELRLHQRGGV 149 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEV++R+ + + +I GT P + + + + G A Sbjct: 150 HYDKGCYLGQEVIARLWFKAKPKAWLHLIQGTGSAPAQAEQLNKGIQVVNSAAIDGGYIA 209 Query: 239 LAIAR 243 L +AR Sbjct: 210 LVVAR 214 >gi|238759289|ref|ZP_04620455.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236] gi|238702450|gb|EEP95001.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236] Length = 330 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 37/249 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSW---------- 104 E +E RS DS + +L Y + S V+I QP I G Sbjct: 80 GEGLAFIE-RRSLLDSQLSELKKYAVFSKVVIAPQPDVVLLGIAGTAAKTALAEVFTELP 138 Query: 105 NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 + EH T + S ERF + A L+ G + ++ K + L I Sbjct: 139 STEHPVVQQGQSTLLHFSLPAERFLLVTDAEQAQQLVATLSGSAQ--FNNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGF--PIIDSESSAQFIPQATNIQALNGISFSKGCYSGQEMVARAKYRGANKRALYWLAG 254 Query: 210 -TDDLPPSG 217 + +P +G Sbjct: 255 HANRVPAAG 263 >gi|290476407|ref|YP_003469312.1| hypothetical protein XBJ1_3430 [Xenorhabdus bovienii SS-2004] gi|289175745|emb|CBJ82548.1| putative enzyme [Xenorhabdus bovienii SS-2004] Length = 332 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 38/254 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 + L++ I V G A +LQ +T+D+ +L K SA +GK+ + Sbjct: 23 ISLNDWGMISVTGADAEKYLQGQVTSDIASLNQKHVL-SAHCDAKGKMWSNLRLFHRGEG 81 Query: 58 -SKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGV 100 + IE T + ++ K+ ++ K+ F K ++++ + P Sbjct: 82 FAYIERRTVLDSQLTELKKYAVFSKVTFAKDEESILLGVAGAGSRNALAEMFPTLPDAET 141 Query: 101 VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 + ++ T + +F ERF + A L G + +D + + L I G Sbjct: 142 TVIQHETTTLLHFAFPAERFLLVTDQATAAQLTETLVGKLQAQLNDSQQWLALEIEAGF- 200 Query: 155 DPNTDFLPSTIF-PHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P D S F P + +L G IS KGCY GQE+V+R ++R ++ + GT Sbjct: 201 -PVIDSASSAQFIPQATNIQVLEGSISFKKGCYTGQEMVARAKYRGANKRAMYWLAGT-- 257 Query: 213 LPPSGSPILTDDIE 226 S P+ DD+E Sbjct: 258 --ASSLPVAGDDLE 269 >gi|167562451|ref|ZP_02355367.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia oklahomensis EO147] gi|167569634|ref|ZP_02362508.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia oklahomensis C6786] Length = 348 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 40/232 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL + +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 IL-----EIDRSKRDSLI------------DKLL---------------FYKLRSNVIIE 93 +L + KR S+ D L+ F L V + Sbjct: 101 LLVSKDVQPAAQKRLSMFVLRAKAKLADASDALVAIGFAGDVRAALSGVFDALPDGVHTK 160 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152 + G ++ + +I R + D L ++++ + + ++R Sbjct: 161 VDAPAGALIRLPDAAGRARYLWIGTRAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R Sbjct: 220 ITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRR 266 >gi|154338439|ref|XP_001565444.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062493|emb|CAM42355.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 397 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 35/162 (21%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 S + Y L + GI + + P + +D L G+S KGCY+GQE+ R Sbjct: 230 SSVDPYTTLLYSRGIGE-GPGVFKNKSLPFEGNLDFLKGVSFHKGCYLGQELTHRTHVML 288 Query: 199 IIRKR-------------PMIITGTDDLPPSGSPILTDDIEIGT---------LGVV--- 233 + RKR P + T TDD G+ T +EIG +GVV Sbjct: 289 VTRKRTVPLHFGPTSGGPPAVSTTTDD----GAVATTRPVEIGEPLYSAAKEKIGVVTGV 344 Query: 234 ---VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 VG L + +DK H + G+ L G + P W+ Sbjct: 345 CGQVGVGLLRLRYVDKATHTV-PGLQLK-DGTPAQTHLPDWW 384 >gi|186475806|ref|YP_001857276.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia phymatum STM815] gi|184192265|gb|ACC70230.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia phymatum STM815] Length = 349 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 30/227 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I G A FL + +T D L AR + +P+G++L FL+ E Sbjct: 42 LPQFGVIDATGDDAASFLHSQLTNDTQHLDAATARLAGYCSPKGRLLASFLVWCSGESIR 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 +L + + + ++ +L + LR+ + + + + + + S D Sbjct: 102 ML-VSKDVQPAVQKRLSMFVLRAKAKLSDASGDTLAIGLAGDVRKALSGIFDAIPDGVHV 160 Query: 119 ----------RFSIADVLLHRTW-GHNEKIASDIKTYHE--LRINHGIVD--------PN 157 R A L W G ++ + + R++ G+ D P Sbjct: 161 KVDGPAGSLVRVPDAAGRLRYVWVGPKAEVEACLPALETKLRRVSPGVWDWLDIRAGEPR 220 Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 T + P D+L G++ KGCY GQEVV+R Q+R I++R Sbjct: 221 ITQRVVEQFVPQMINFDVLGGVNFRKGCYPGQEVVARSQYRGTIKRR 267 >gi|221198168|ref|ZP_03571214.1| glycine cleavage T protein [Burkholderia multivorans CGD2M] gi|221208341|ref|ZP_03581344.1| glycine cleavage T protein [Burkholderia multivorans CGD2] gi|221171754|gb|EEE04198.1| glycine cleavage T protein [Burkholderia multivorans CGD2] gi|221182100|gb|EEE14501.1| glycine cleavage T protein [Burkholderia multivorans CGD2M] Length = 310 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 46/280 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 L+ I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 62 Query: 65 -----------------FILE-----IDRSK-----------RDSLIDKLLFYKLRSNVI 91 F+L D S+ RD+L +F L V Sbjct: 63 LLVSKDIQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDAL--SGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ +I R + D L G ++ + + ++R Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGE 179 Query: 152 G-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--I 207 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 180 PRITQPVVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHV 234 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 235 AADTDTMHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|71899417|ref|ZP_00681576.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|71730826|gb|EAO32898.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] Length = 305 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + +++ G + F A ++D L SA LTP+G++ F + + E+ Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121 +L + + + +L Y R V I ++ I T + ++ +D Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELD 153 Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174 ++ + L R ++ + + + G+ P D + P +D Sbjct: 154 VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVRSAEGDIGQVASVA 270 Query: 235 GKKALAIARID 245 ALA+ ID Sbjct: 271 EGLALAVLPID 281 >gi|54310198|ref|YP_131218.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9] gi|81615002|sp|Q6LMR1|YGFZ_PHOPR RecName: Full=tRNA-modifying protein ygfZ gi|46914639|emb|CAG21416.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9] Length = 329 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 28/234 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I + G +LQ +T DV++LP + A +GK+ F + Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPINASIFGAHCDAKGKMRTIFRLFNH 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116 E L+ +S + + +L Y + S V IE + LS Q F Sbjct: 84 NEGYGFLQ-RKSVMEIQLPELKKYAVFSKVDIEASSDVLLGLSGEQAQAVVEQHFPGDGD 142 Query: 117 -------------DER--FSIADVLLHR-----TWGHNEKIASDIKTYHELRINHGIVDP 156 D+R F+IA + HN SD + + + I P Sbjct: 143 VRVITAGTAIKVDDDRWLFAIAPEQAEQLINTLVETHNNVQLSDSTLWDLYDVLYAI--P 200 Query: 157 NTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D + + F P + ++GIS KGCY GQE V+R ++R I ++ I+TG Sbjct: 201 RIDAVTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTG 254 >gi|293611027|ref|ZP_06693326.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826679|gb|EFF85045.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 240 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 31/214 (14%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + K+ ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKMNPESFEIVVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q G V N + F+ + + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNHQTEFTTAETDISEWQKQAIMTGQAWIT 129 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 T HE + P + + G++ KGCY+GQE+V+R Sbjct: 130 Q-------ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + + + ++ GT + P S + L +D+E+ Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDVEV 197 >gi|28198265|ref|NP_778579.1| hypothetical protein PD0348 [Xylella fastidiosa Temecula1] gi|182680902|ref|YP_001829062.1| putative aminomethyl transferase [Xylella fastidiosa M23] gi|28056335|gb|AAO28228.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182631012|gb|ACB91788.1| putative aminomethyl transferase [Xylella fastidiosa M23] Length = 305 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + +++ G + F A ++D L SA LTP+G++ F + + E+ Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121 +L + + + +L Y R V I ++ I T + ++ +D Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELD 153 Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174 ++ + L R ++ + + + G+ P D + P +D Sbjct: 154 VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVA 270 Query: 235 GKKALAIARID 245 ALA+ ID Sbjct: 271 EGLALAVLPID 281 >gi|50288779|ref|XP_446819.1| hypothetical protein [Candida glabrata CBS 138] gi|74637641|sp|Q6FSH5|CAF17_CANGA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49526128|emb|CAG59750.1| unnamed protein product [Candida glabrata] Length = 497 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSR 193 EK+ D + + ++ +G +D + P ++ P + D N +S KGCY+GQE+ +R Sbjct: 303 EKLEKDSSFFKQCKLQYGFLDGSDAIQPDSLMPLELNFDYFPNTVSNNKGCYVGQELTAR 362 Query: 194 IQHRNIIRKR 203 I+RKR Sbjct: 363 TYSTGILRKR 372 >gi|332284309|ref|YP_004416220.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7] gi|330428262|gb|AEC19596.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7] Length = 348 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 5/44 (11%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P T+ +DL++G+S TKGCY GQEVV+R +R +++R Sbjct: 216 FIPQTLN-----LDLIDGVSFTKGCYPGQEVVARSHYRGTVKRR 254 >gi|270356904|gb|ACZ80689.1| putative mitochondrial transferase CAF17 protein [Filobasidiella depauperata] Length = 374 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 140 DIKTYHELRINH---GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 DI T E +++ G+ + + +P P ++ MD+ G+ KGCY+GQE+ R H Sbjct: 182 DISTADEYKLHRMLLGVPEGPEEIVPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYH 241 Query: 197 RNIIRKR 203 RKR Sbjct: 242 TGATRKR 248 >gi|157960459|ref|YP_001500493.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella pealeana ATCC 700345] gi|157845459|gb|ABV85958.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella pealeana ATCC 700345] Length = 323 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 35/250 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ F+ +T D+ +L R A P+GK+L F ++ F Sbjct: 24 LSHLGLISVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAKDDTLF 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSF--I 116 I+ +D+L L +L+ + + + +W Q + + + F + Sbjct: 84 IM----MPKDTL--ALDLPQLQKYAVFSKAELADISDAWLLLGVAGEQANAWLTAQFGEL 137 Query: 117 DERFSIAD--VLLHRTW---------------GHNEKIASDIKTYHELRINHGIVDPNTD 159 ++ D ++LH E+ D + L I G PN Sbjct: 138 SAELTLIDGGIILHDAGRYIVAIDKTHADAFIAKIEQPIFDASAWQTLEILAGY--PNLG 195 Query: 160 FLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 F P + +NGIS KGCY+GQE V+R+++R ++ I++G P + Sbjct: 196 ASHQGQFVPQMCNVQAVNGISFNKGCYMGQETVARMKYRGGNKRALYIVSGKVSAPLTAD 255 Query: 219 PILTDDIEIG 228 L +E G Sbjct: 256 SQLEIALEDG 265 >gi|288941015|ref|YP_003443255.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180] gi|288896387|gb|ADC62223.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180] Length = 342 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 37/242 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I G A FLQ +T D+ L + SA + +G+IL F +++E T Sbjct: 38 LSHLGLIAARGADAASFLQGQLTNDIRELSASHTQLSAHCSQKGRILTLFRALRLDE-TI 96 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPI-------------N 98 L+ + I +L + LR+ V + E P N Sbjct: 97 YLQTPMERVAESIQRLSRFILRAKVTLNDASDELIRIGLAGETAPALLAAQGLPVPERDN 156 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGH--NEKIASDIKTYHELRINHGIV 154 G+V S + RF + L W + ++ + L I G+ Sbjct: 157 GLVQS--DDVAVIRIPGPTPRFELIGPFEPLRALWEALAPQAAPANATDWTRLDIQAGL- 213 Query: 155 DPNT-DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 PN D T P + ++G+S KGCY GQEVV+R+Q +++R + D Sbjct: 214 -PNVYDRTVETFVPQMLNLQRIDGVSFNKGCYTGQEVVARMQFLGKLKRRMYLAEVERDA 272 Query: 214 PP 215 PP Sbjct: 273 PP 274 >gi|254467880|ref|ZP_05081286.1| glycine cleavage T protein [beta proteobacterium KB13] gi|207086690|gb|EDZ63973.1| glycine cleavage T protein [beta proteobacterium KB13] Length = 278 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 34/246 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64 L + S I++ G+ + FLQ +T DV K S + P+G++ + I ++ + ++ Sbjct: 6 LDHYSIIEISGEDHLDFLQGQLTNDVKKNEKKFIY-SGMCNPKGRLFAFLRILRVPDLNS 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122 L S D++ +L + LRS V+I+ + F ID+ I Sbjct: 65 TFLVTPSSLADAIQKRLTMFVLRSKVVIQ------------KAENFHLLGIIDDSPKIYI 112 Query: 123 -ADVLLHRTWGHNEK--IASDIKTYHELRINHGIVD------PNTDF-LPSTI------- 165 D L+ N I +D +++++ H D + +F +P + Sbjct: 113 PTDQQLNLPDQTNRSVIILNDSNLFNQIKNEHSFEDISMWIKKDIEFGIPEVMEKTQEKF 172 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDD 224 H +DL++ ++ KGCY GQE+V+R + + R L G +L +D Sbjct: 173 LAHTCNLDLIDAVNFKKGCYTGQEIVARTHYLGKPKHRSFYGVINSKLSFDYGEQVLEND 232 Query: 225 IEIGTL 230 IGT+ Sbjct: 233 RSIGTV 238 >gi|238786189|ref|ZP_04630139.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970] gi|238712906|gb|EEQ04968.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970] Length = 330 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 46/260 (17%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ L + Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104 E FI RS D+ + +L Y + S V+I QP V+L Sbjct: 80 GEGLAFIER--RSLLDNQLSELKKYAVFSKVVITAQP-EAVLLGIAGAQARAALAELFAE 136 Query: 105 --NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148 + EH T + S ERF + A L+ + + ++ + + L Sbjct: 137 LPDAEHPVLQQGSSTLLHFSLPAERFLLVTDTEQAQQLIDKL--ADSAQLNNSQQWLALD 194 Query: 149 INHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 I G I+D +T + P + LNGIS +KGCY GQE+V+R ++R ++ Sbjct: 195 IEAGFPIIDADTS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYW 251 Query: 207 ITGTDDLPPSGSPILTDDIE 226 + G S P +D+E Sbjct: 252 LAGQ----ASRVPAAGEDLE 267 >gi|323308509|gb|EGA61754.1| Iba57p [Saccharomyces cerevisiae FostersO] Length = 497 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 >gi|317406758|gb|EFV86898.1| hypothetical protein HMPREF0005_06002 [Achromobacter xylosoxidans C54] Length = 152 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 5/44 (11%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R Sbjct: 33 FIPQTVN-----LDLIQGVSFTKGCYPGQEVVARSHYRGTVKRR 71 >gi|150864230|ref|XP_001382966.2| hypothetical protein PICST_40677 [Scheffersomyces stipitis CBS 6054] gi|158513692|sp|A3LNW4|CAF17_PICST RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|149385486|gb|ABN64937.2| CCR4 transcriptional complex component [Scheffersomyces stipitis CBS 6054] Length = 469 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 +G+ + + T+ P + +D NG+SL KGCY+GQE+ R + +IRKR M Sbjct: 275 NGLFEGQDADIDQTLLPFECNLDYTNGLSLDKGCYVGQELTIRTYNNGVIRKRIM 329 >gi|134094618|ref|YP_001099693.1| hypothetical protein HEAR1394 [Herminiimonas arsenicoxydans] gi|133738521|emb|CAL61566.1| putative Glycine cleavage T protein (aminomethyl transferase) [Herminiimonas arsenicoxydans] Length = 352 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 41/228 (17%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 I G A FL + +T DV L AR + +P+G++L LI K D +L++ Sbjct: 52 LIAASGDEAAHFLHSQLTNDVEHLDAGAARLAGYCSPKGRLLASLLIWKTA-DGIMLQLP 110 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSNSSFIDERFS 121 R + S+ +L + LR+ + N V+L Q ++ D+ S Sbjct: 111 RELQASVQKRLQMFVLRAKARLIDATENHVMLGLAGPAASKVLQQWFPVLPAAIYDKAES 170 Query: 122 IADVLLHR--TWGHNE-----KIASDIKTYHEL---------------RINHGI----VD 155 A L+ +G A ++ + +L I+ G+ + Sbjct: 171 AAGTLIRHPDAFGTARYQWITTAAQAVEAWPQLTKVLQAAGAAAWQLAEIDSGVPHISIA 230 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I +L+ G++ KGCY GQE+V+R Q+ +++R Sbjct: 231 TQEKFVPQMIN-----FELIGGVNFRKGCYPGQEIVARSQYLGKLKRR 273 >gi|320103031|ref|YP_004178622.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644] gi|319750313|gb|ADV62073.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644] Length = 388 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 13/95 (13%) Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ---HRNI 199 LRI G+ VD D LP F DA I+ TKGCY+GQE V+R+ H N Sbjct: 229 LRIEIGLPRFGVDLTADHLPQE-FDRDA-----RAINFTKGCYLGQETVARLDALGHVNK 282 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + + + LPPSG+ ++ DD +GTL V Sbjct: 283 MLRHLKFHSVNAPLPPSGTTLMKDDRPVGTLTSVA 317 >gi|323304291|gb|EGA58065.1| Iba57p [Saccharomyces cerevisiae FostersB] Length = 497 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 >gi|107028926|ref|YP_626021.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia AU 1054] gi|105898090|gb|ABF81048.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia AU 1054] Length = 344 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I V G A FL + +T D+ L A+ S +P+G++L FL + D Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSAQLSGYCSPKGRLLASFLTWRAGHDVR 96 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92 +L + + + ++ +L + LR+ V + Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEP 214 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|307579370|gb|ADN63339.1| putative aminomethyl transferase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 267 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +++ G + F A ++D L SA LTP+G++ F + + E+ +L + Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFSIADVL 126 + + +L Y R V I ++ I T + ++ +D ++ + Sbjct: 61 DGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELDVSGIT 120 Query: 127 LHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGIS 179 L R ++ + + + G+ P D + P +D LN S Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDGLNAYS 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 + KGCY GQE+V+R ++R ++ + P G + + + +IG + V AL Sbjct: 179 IRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVAEGLAL 237 Query: 240 AIARID 245 A+ ID Sbjct: 238 AVLPID 243 >gi|239501762|ref|ZP_04661072.1| hypothetical protein AbauAB_05561 [Acinetobacter baumannii AB900] gi|260557200|ref|ZP_05829416.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606] gi|260409306|gb|EEX02608.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606] Length = 240 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + K ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q G V N FS++ + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 IA T HE + P + + G++ KGCY+GQE+V+R Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT D P + L +D+E+ G + +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216 >gi|254796700|ref|YP_003081536.1| aminomethyl transferase family protein [Neorickettsia risticii str. Illinois] gi|254589932|gb|ACT69294.1| aminomethyl transferase family protein [Neorickettsia risticii str. Illinois] Length = 310 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + Y +RI I + + P+ IFP + MD KGCY+GQEV+SR + +N I Sbjct: 189 EEYQRIRIMSKISEAGKELKPN-IFPLEYAMDY--AFDFNKGCYVGQEVISRFRIKNFIE 245 Query: 202 KRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAI 241 + + G + G I D +G LA+ Sbjct: 246 RALFCLQGEEGASLEEGDKIYLGDDMVGCFSSCCQNYGLAV 286 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILE 68 +F + G+ FLQ IIT +V TL A G ILTP+G+++ + K +T +LE Sbjct: 9 NFYSISGERVKAFLQGIITCNVETLE-DCAYG-LILTPKGRLICDLFVYKCSTETELLLE 66 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE 93 + ++L+ L Y + + I+ Sbjct: 67 TNHCNTEALLSVLDLYNFKRGITIQ 91 >gi|88858214|ref|ZP_01132856.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas tunicata D2] gi|88819831|gb|EAR29644.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas tunicata D2] Length = 304 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 11/118 (9%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T+ L I HG NT + + P + + GIS TKGCY GQE V+R+++ ++ Sbjct: 164 TWQSLAILHGEPSLNTSAVGEYV-PQMVNLQAIGGISFTKGCYTGQETVARMKYLGKNKR 222 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR-IDKVDHAIKKGMALTV 259 II D SPI +D++E LG + IA D +D KK +AL V Sbjct: 223 AMYIIQAQGD-----SPINSDEVE-QQLGENWRRAGHIIASAFDPID---KKAVALVV 271 >gi|332160499|ref|YP_004297076.1| putative global regulator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607033|emb|CBY28531.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Yersinia enterocolitica subsp. palearctica Y11] gi|325664729|gb|ADZ41373.1| putative global regulator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863456|emb|CBX73575.1| tRNA-modifying protein ygfZ [Yersinia enterocolitica W22703] Length = 330 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 47/257 (18%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59 ++ + L + + + G + +LQ +TAD+ LP A +GK+ L + Sbjct: 20 LTLISLDDWVLVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104 E FI RS D+ + +L Y + S V+I QP + V+L Sbjct: 80 GEGLAFIER--RSVLDNQLSELKKYAVFSKVVIAAQP-DAVLLGVAGAQAKAALAEVFAE 136 Query: 105 --NQEH--------TFSNSSFIDERF----------SIADVLLHRTWGHNEKIASDIKTY 144 N +H T S ERF + + L R +N K + Sbjct: 137 LPNADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKLTDRAQFNNSK------QW 190 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 L I G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ Sbjct: 191 LALDIEAGFPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRAL 249 Query: 205 MIITG-TDDLPPSGSPI 220 + G + +P +G + Sbjct: 250 YWLAGHANRVPAAGEDL 266 >gi|237748463|ref|ZP_04578943.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes OXCC13] gi|229379825|gb|EEO29916.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes OXCC13] Length = 333 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 108/281 (38%), Gaps = 42/281 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L + + G+ A+ F+ ++ D+ L AR +A PQG++L F K Sbjct: 21 VLLKQTGLLALEGEDAVSFIHGQLSNDIEHLGSSQARLAAYCNPQGRMLALFHAWKSSGK 80 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNS 113 + L + +L +L Y LR+ V + + N +L E T + Sbjct: 81 VW-LTVPLDILPALQKRLQMYVLRAKVTLSDESGNMAILGIGGEKGGEALSKWFETLPSE 139 Query: 114 SF------------IDERFSIADVLL----HRTWGHNEKIASDIKTYHELRINHGIVDPN 157 F + + F LL R +++S + E G + Sbjct: 140 PFGKTENEFGVLVRVADAFGFPRYLLTIAEKRLQVVESELSSTLSVCDESGWTMGDIKAG 199 Query: 158 TD--FLP--STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGT 210 LP P ++ G+S KGCY GQEV++R Q++ +++R M+ Sbjct: 200 VPQITLPVQDRFIPQMVNLEQAGGLSFKKGCYPGQEVIARSQYKGTVKRRMFHGMVELPF 259 Query: 211 DDLPP------SGSPILTDDIEIGTLGVVVGKKALAIARID 245 +D PP +G+ I+ D ++ G +V R+D Sbjct: 260 EDNPPIDVNMTAGANIVDSDGQV--CGTIVSSARRDNNRVD 298 >gi|331005217|ref|ZP_08328610.1| Folate-dependent protein for Fe/S cluster synthesis [gamma proteobacterium IMCC1989] gi|330420960|gb|EGG95233.1| Folate-dependent protein for Fe/S cluster synthesis [gamma proteobacterium IMCC1989] Length = 327 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 11/105 (10%) Query: 118 ERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTD--FLPSTIFPHDAL 171 +RFS IA + NE I D + + E++I +GI + NT F P I H+ Sbjct: 168 KRFSTYIASEPMQNEVMSNEGILDD-EYWDEVKIKNGIAGIHANTSGVFTPHAINYHN-- 224 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + N +S +KGCY GQEVV+R+Q+ ++++ + T +P + Sbjct: 225 --MGNAVSFSKGCYTGQEVVARMQYLGNLKRQLYLFTSKTTIPTT 267 >gi|261400643|ref|ZP_05986768.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC 23970] gi|269209550|gb|EEZ76005.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC 23970] Length = 288 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 32/238 (13%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVITNMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IAD 124 ++ I +L + LR+ V+ EI G L+ + E + +F E S + Sbjct: 72 LLEATIKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAFTAECVSDGICSV 131 Query: 125 VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 VL HR H + A HE+R + + T A+ +L Sbjct: 132 VLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQML 183 Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 N G+ KGCY GQE+++R Q+R +++ +++G + +G + D E+G Sbjct: 184 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEVG 240 >gi|134295923|ref|YP_001119658.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia vietnamiensis G4] gi|134139080|gb|ABO54823.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia vietnamiensis G4] Length = 344 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/283 (20%), Positives = 105/283 (37%), Gaps = 52/283 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL--------- 56 L+ I V G A FL +T D+ L AR + +P+G++L FL Sbjct: 37 LAQFGVIDVAGDDAATFLHGQLTNDIEHLDAASARVAGYCSPKGRLLASFLAWREGHGVR 96 Query: 57 -------------------------ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91 +S + ++ RD+L +F L V Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRAKAKLSDASDAVAVVGFSGDVRDAL--SGVFDALPDGVH 154 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-----HE 146 +++ GV++ +I R + D + G ++ + + E Sbjct: 155 VKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALAGTLPVVSPAVWDWLDVRAGE 213 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI +V+ F+P + D++ ++ KGCY GQEVV+R Q+R I++R + Sbjct: 214 PRITQPVVE---QFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTAL 265 Query: 207 --ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 266 AHVAGETDSVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|254252183|ref|ZP_04945501.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158] gi|124894792|gb|EAY68672.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158] Length = 344 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 104/267 (38%), Gaps = 46/267 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 96 Query: 65 -----------------FILE-----IDRSK-----------RDSLIDKLLFYKLRSNVI 91 F+L D S+ RD+L +F L V Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDTL--SRIFDALPDGVH 154 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ GV++ +I R + D + ++ + + ++R Sbjct: 155 VKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALGDALPVVSPAVWDWLDVRAGE 213 Query: 152 G-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--I 207 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 214 PRITQPTVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHV 268 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV 234 G D+ +G + D G++V Sbjct: 269 AGETDVAHAGVELFHGDDPGQPCGMIV 295 >gi|184159392|ref|YP_001847731.1| aminomethyltransferase related to GcvT [Acinetobacter baumannii ACICU] gi|332876232|ref|ZP_08444007.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059] gi|183210986|gb|ACC58384.1| predicted aminomethyltransferase related to GcvT [Acinetobacter baumannii ACICU] gi|322509304|gb|ADX04758.1| aminomethyltransferase [Acinetobacter baumannii 1656-2] gi|323519331|gb|ADX93712.1| GcvT-like aminomethyltransferase [Acinetobacter baumannii TCDC-AB0715] gi|332735504|gb|EGJ66556.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059] Length = 240 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + K ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFEIIVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q G V N FS++ + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 IA T HE + P + + G++ KGCY+GQE+V+R Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT D P + L +D+E+ G + +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGDSPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216 >gi|221215089|ref|ZP_03588056.1| glycine cleavage T protein [Burkholderia multivorans CGD1] gi|221165025|gb|EED97504.1| glycine cleavage T protein [Burkholderia multivorans CGD1] Length = 310 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 42/272 (15%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 I V G A FL + +T D+ L AR S +P+G++L FL + D +L Sbjct: 9 IDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVRLLVSKD 68 Query: 68 -EIDRSKRDSLI-------------------------DKL--LFYKLRSNVIIEIQPING 99 + KR S+ D L +F L V +++ G Sbjct: 69 IQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDGPAG 128 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPNT 158 ++ +I R + D L G ++ + + ++R I P Sbjct: 129 ALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEPRITQPVV 187 Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP 215 + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + D Sbjct: 188 EQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDAVR 242 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 +G + D G++V A +D + Sbjct: 243 AGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|304387443|ref|ZP_07369634.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|304338536|gb|EFM04655.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] Length = 304 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86 Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124 ++ I +L + LR+ V+ EI ++ + + + S + ++D Sbjct: 87 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 146 Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T A+ + Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 256 >gi|241953047|ref|XP_002419245.1| mitochondrial protein, putative [Candida dubliniensis CD36] gi|223642585|emb|CAX42834.1| mitochondrial protein, putative [Candida dubliniensis CD36] Length = 469 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 S++ P + +D +NG+SL KGCY+GQE+ R + +IRKR Sbjct: 291 SSLLPFECNLDYINGLSLDKGCYVGQELTIRTFNNGVIRKR 331 >gi|304413501|ref|ZP_07394974.1| aminomethyltransferase folate-binding domain-containing hypothetical protein [Candidatus Regiella insecticola LSR1] gi|304284344|gb|EFL92737.1| aminomethyltransferase folate-binding domain-containing hypothetical protein [Candidatus Regiella insecticola LSR1] Length = 325 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 52/258 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + +LQ +TADV + + +A P+GK+ + EE Sbjct: 25 LDDWVLVTITGVDRVNYLQGQVTADVAAMTAEQHIMTAHCDPRGKMWSNLRLFHREEGLV 84 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------------NQEH 108 +E RS D+ + +L Y + S V I + V+L N +H Sbjct: 85 FIE-RRSVLDNQLKELKKYAVFSKVNISVD-TKAVLLGVAGLTARETLATLFSTLPNTKH 142 Query: 109 --------TFSNSSFIDERFS-IADVLLHRTW-----------GHNEKIASDIKTYHELR 148 T + + ERF + D + W N+ +A DI+ Sbjct: 143 PVVQQGITTLLHFTQPTERFLLVTDAFQAQQWIEILRSRTQFNNSNQWMALDIQA----- 197 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I+D T L P + L GIS TKGCY GQE V+R Q+R ++ + Sbjct: 198 -GFPIIDEKTSAL---FIPQATNIQTLGGISFTKGCYTGQETVARAQYRGANKRALYWLA 253 Query: 209 GTDDLPPSGSPILTDDIE 226 G + P+ DD+E Sbjct: 254 GN----ANRVPLPGDDLE 267 >gi|226951689|ref|ZP_03822153.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ATCC 27244] gi|226837554|gb|EEH69937.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ATCC 27244] Length = 240 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 40/235 (17%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T V L +R +AI +G+I I KI ++F L + + + Sbjct: 13 GVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQDQAE 72 Query: 76 SLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + F K++ I ++ P +NG I FS + Sbjct: 73 EFAKHIRKFGAFSKMKLEEIGQVFPTVNG----------------IQTDFSTTE------ 110 Query: 131 WGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 +DI T+ I G + T+ L P + + G+ KGCY+GQ Sbjct: 111 --------TDINTWQVQAIQSGQAWITQTTEHL---FQPQELRLHQREGVHFDKGCYLGQ 159 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 E+V+R+ + + +I G + P + + D + ++ G AL IA+ Sbjct: 160 EIVARLWFKAKPKHWLHLIQGKETTPAPATQLNKDVEVVNSIAFDNGYLALVIAK 214 >gi|161524552|ref|YP_001579564.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616] gi|189350692|ref|YP_001946320.1| putative aminomethyltransferase [Burkholderia multivorans ATCC 17616] gi|160341981|gb|ABX15067.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616] gi|189334714|dbj|BAG43784.1| predicted aminomethyltransferase [Burkholderia multivorans ATCC 17616] Length = 345 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 40/232 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 38 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 97 Query: 66 IL-----EIDRSKRDSLI-------------------------DKL--LFYKLRSNVIIE 93 +L + KR S+ D L +F L V ++ Sbjct: 98 LLVSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVK 157 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152 + G ++ +I R + D L G ++ + + ++R Sbjct: 158 VDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALDGKLPVVSPAVWDWLDVRAGEPR 216 Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 217 ITQPVVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRR 263 >gi|322492231|emb|CBZ27505.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 389 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 22/156 (14%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 S Y L + GI + F + P + +D L G+S KGCY+GQE+ R Sbjct: 221 SSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVML 280 Query: 199 IIRKR--PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKK 237 + RKR P+ PP+ G P+ + E IG + V G Sbjct: 281 VTRKRTVPLHFGPASVDPPAAGTITDEGAVATTRPVEVGEPLYSSAREKIGEVTGVCGHV 340 Query: 238 ALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 + + R+ VD A + L + G V+ P W+ Sbjct: 341 GIGLFRLRYVDKATQTVPGLQLKDGTPVRTHLPDWW 376 >gi|307129424|ref|YP_003881440.1| putative folate-dependent regulatory protein [Dickeya dadantii 3937] gi|306526953|gb|ADM96883.1| predicted folate-dependent regulatory protein [Dickeya dadantii 3937] Length = 326 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 42/256 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L + + + + G + +LQ +TADV TL A +GK+ + + Sbjct: 21 ISLDDWALVTLAGPDTVKYLQGQLTADVDTLQAGQHVLCAHCDAKGKMWSNLRLFHYGDG 80 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--------NVII----------EIQPI-------- 97 LE RS RD+ + +L Y + S NV++ + P+ Sbjct: 81 LAYLE-RRSIRDTQLAELKKYAVFSKTTIAADDNVVLLGAVGLDIRAHLAPLFDALPDAD 139 Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHG 152 N VV T + + ERF + + R E ++S +K + L I G Sbjct: 140 NAVVQ--QPGATLLHLAHPAERFLLV-LDAQRAAALIETLSSSVKLNDSRQWQALDIAAG 196 Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 P D + S F P + L GIS TKGCY GQE+V+R ++R ++ + GT Sbjct: 197 --QPIIDSVNSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGTG 254 Query: 212 DLPPSGSPILTDDIEI 227 + +P D++E+ Sbjct: 255 ----AQAPAAGDELEL 266 >gi|238021253|ref|ZP_04601679.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147] gi|237868233|gb|EEP69239.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147] Length = 285 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L + I+ G A FL + D+ LP A + TP+G+++ LI++ Sbjct: 1 MHTTQLPFFAVIRATGDDAADFLHNQFSNDIKNLPANQACYATYNTPKGRVIAN-LIAQN 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +L + ++++ +L Y LR+ V EI P GV S + S F Sbjct: 60 TGNEILLALAADLVEAVVKRLKMYVLRAKVQFEILPDWGVAGSLKSNTPPQHPSEPQLSF 119 Query: 121 SI---ADVLLHRTWGHNEKIASDIKTYHELRI----NHGIVDPNTDFLPSTIFPHDALMD 173 + ++ L T +++ Y H I+ +T + Sbjct: 120 PVNAQGEIQLPHTGSLKIAPCAELPAYDAAAEAAWQQHEILSGYPWICAAT--SESCVAQ 177 Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 +LN G+ KGCY GQEV++R Q+R +++ I T Sbjct: 178 MLNQHTIGGVHFRKGCYPGQEVIARAQYRGQVKRGLAIAT 217 >gi|206560330|ref|YP_002231094.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315] gi|198036371|emb|CAR52267.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315] Length = 344 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 42/272 (15%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------IEED 63 I V G A FL + +T D+ L AR S +P+G++L FL + + +D Sbjct: 43 IDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHGVRLLVSKD 102 Query: 64 T----------FILEIDRSKRDS------------LIDKL--LFYKLRSNVIIEIQPING 99 F+L D+ + D L +F L V +++ G Sbjct: 103 VQPAVQKRLSMFVLRAKAKLTDANDTLAVAGFAGDVRDALSGIFDALPDGVHVKVDGPAG 162 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPNT 158 ++ +I R + D L G ++ + + ++R I P Sbjct: 163 TLIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEPRITQPAV 221 Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP 215 + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + G D Sbjct: 222 EQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETDTVH 276 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 +G + D G++V A +D + Sbjct: 277 AGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|241668459|ref|ZP_04756037.1| hypothetical protein FphipA2_06811 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876992|ref|ZP_05249702.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843013|gb|EET21427.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 248 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 36/227 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62 +N ++V G I FLQ ++T+D+ L + ++T +G+I+ + + Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLS---DDNNLLMTTFANLKGRIISLCFVKYVSS 62 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120 +L ++++ D+L+ L Y + S V + N++++ F+++ F++ Sbjct: 63 QKLLLSVEQTVIDNLLSWLKKYGMFSKVSFAV----------NEDYSLFFTDNGFLNHDI 112 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGIS 179 + D L ++ E+I I ++L I I N + FLP+ + L ++ +S Sbjct: 113 LVKDAL--KSEISYEQIQK-INILNKLAI---IDQANVEKFLPAEL----DLDNIEKVVS 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----DLPPS-GSPI 220 TKGCY+GQEV++R+ ++ ++K ++ DL S G P+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLKTSDGKPL 209 >gi|169632509|ref|YP_001706245.1| hypothetical protein ABSDF0627 [Acinetobacter baumannii SDF] gi|169151301|emb|CAP00005.1| conserved hypothetical protein [Acinetobacter baumannii] gi|193078266|gb|ABO13230.2| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978] Length = 240 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + K ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133 + Y S + + Q G V N FS++ + ++ + W Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIVTGQAW-- 127 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 IA T HE + P + + G++ KGCY+GQE+V+R Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 + + + ++ GT D P + L +D+E+ G + +VV K A Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216 >gi|149192318|ref|ZP_01870526.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1] gi|148833851|gb|EDL50880.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1] Length = 323 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 40/246 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ +++ G +LQ +T DV++L + A +GK+ F + IE Sbjct: 26 LNRWGALEMTGDDRKSYLQGQVTCDVVSLEQNQSTFGAHCDAKGKVWSAFRLCHIENGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV--IIEIQPINGVVLSWNQE---HTFSNSSFI---- 116 +++ +S + + +L Y + S V II +P+ GV+ + Q+ F S + Sbjct: 86 MIQ-PQSALEKELTELKKYAVFSKVELIISTKPLIGVMGTSAQQWINQQFPTSGAVRQNK 144 Query: 117 --------DERFSI---------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 DER+ + W +A + T ++ I++ Sbjct: 145 GSTAIQINDERWMLLVDGDLQSLLSSDSELLW-----VAESLWTKFDIEQGLPILEAEQQ 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L+GIS KGCY GQE V+R ++R I ++ + G D SP Sbjct: 200 ---NQHIPQALNLQALDGISFNKGCYTGQETVARAKYRGINKRMLANVRGLLD-----SP 251 Query: 220 ILTDDI 225 + DDI Sbjct: 252 LSDDDI 257 >gi|254671408|emb|CBA08895.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 304 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IA 123 ++ + +L + LR+ + EI G L + E + +F E S + Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECVSDGICS 146 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A HE+R + + T A+ + Sbjct: 147 VVLPHRGILHIAPETALPPYDAAAESAWKLHEIRSGYPWICAATK--------ETAVAQM 198 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +GS + D E G Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAADGEEAG 256 >gi|89901035|ref|YP_523506.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax ferrireducens T118] gi|89345772|gb|ABD69975.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax ferrireducens T118] Length = 317 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 106/284 (37%), Gaps = 30/284 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I+V G+ A FL +T D L AR +A + +G++ F+ K Sbjct: 19 LTHLGVIRVEGEDAAKFLHGQLTQDFSLLGLSEARLAAFCSAKGRMQASFIGFKRSPTDI 78 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQE--HTFSNSSFI 116 +L R + + ++ + LR+ + + + G L E + S++ Sbjct: 79 LLVCSRDILAATLKRMSMFVLRAKAKLSDATADFAVYGLAGTALQNTIETIAGYEGSAWA 138 Query: 117 DERFSI--------ADVLLHRTW----GHNEKIASDIKT----YHELRINHGIVDPNTDF 160 F AD W G A+ + + E+R G + T Sbjct: 139 KTDFGPISLVNLYPADGTARALWVAPVGAPAPTAAVMTAEQWAWSEVR---GGIATITQT 195 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 + P + + G+S KGCY GQEVV+R Q R +++R + L +G + Sbjct: 196 VVEAFVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYLAHSESAL-NAGDEL 254 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKKGMALTVHGVR 263 D G+VV A D V I A VH +R Sbjct: 255 FAPDDASQPCGMVVQAAAAPTGGCDAIVSMQITAFAAGGVHAIR 298 >gi|167586963|ref|ZP_02379351.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ubonensis Bu] Length = 344 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 44/284 (15%) Query: 2 SSVYLSNQSF--IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 + Y+ F I V G A FL +T D+ L AR + +P+G++L F+ + Sbjct: 31 AGAYMPLPQFGVIDVAGDDAATFLHTQLTNDIEHLDAASARLAGYCSPKGRLLASFVAWR 90 Query: 60 IEEDTFIL-----EIDRSKRDSLI------------DKL---------------LFYKLR 87 D +L + KR S+ D L +F L Sbjct: 91 SGHDVRLLVSKDVQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRAALSGIFDALP 150 Query: 88 SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 V ++I G ++ +I R + D L G ++ + + ++ Sbjct: 151 DGVHVKIDGPAGALIRMPDAAGKRRYLWIGPRAEV-DARLAALDGKLPAVSPAVWDWLDI 209 Query: 148 RINHG-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R + P + F+P I D++ ++ KGCY GQE+V+R Q+R I++R Sbjct: 210 RAGEPRVTQPAVEQFVPQMIN-----FDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTA 264 Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G+VV A +D + Sbjct: 265 LAHAAGDTDAVRAGIELFHSDDPSQPCGMVVNAAAAPAGGVDAL 308 >gi|91783550|ref|YP_558756.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia xenovorans LB400] gi|91687504|gb|ABE30704.1| Putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia xenovorans LB400] Length = 361 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 32/271 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I G A FL +T D L AR + + +G++L FL + DT Sbjct: 54 LTQFGVIDATGDDAASFLHGQLTNDTQHLDAASARLAGYCSAKGRLLASFLTWR-SGDTI 112 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 L + + + ++ +L + LR+ + V+ + + S D Sbjct: 113 RLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPDGVHV 172 Query: 118 -------ERFSIADVL--LHRTW-GHNEKIASDIKTYHEL--RINHGIVD--------PN 157 + D L L W G +I S + E R++ + D P Sbjct: 173 KVDGAAGSLIRVPDALGRLRYLWVGPKAQIESQLALLDETLKRVSPAVWDWLDIRAGEPR 232 Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLP 214 T + P D+L ++ KGCY GQEVV+R Q+R I++R + T G D Sbjct: 233 ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLATVAGEPDTV 292 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +G+ + D G+VV + +D Sbjct: 293 RAGAELFHSDDPGQPCGMVVNAASAPEGGVD 323 >gi|254230558|ref|ZP_04923925.1| protein YgfZ [Vibrio sp. Ex25] gi|262393261|ref|YP_003285115.1| glycine cleavage T-protein [Vibrio sp. Ex25] gi|151936916|gb|EDN55807.1| protein YgfZ [Vibrio sp. Ex25] gi|262336855|gb|ACY50650.1| glycine cleavage T-protein [Vibrio sp. Ex25] Length = 322 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257 >gi|300712072|ref|YP_003737886.1| aminomethyltransferase [Halalkalicoccus jeotgali B3] gi|299125755|gb|ADJ16094.1| aminomethyltransferase [Halalkalicoccus jeotgali B3] Length = 358 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ L N + KGC++GQEV+SR+++R +R ++ +LP +G+ +L DD +G + Sbjct: 244 VLGLRNAVDFEKGCFVGQEVISRVENRGQPSQR-LVGLRCSELPAAGTAVLGDDETVGEI 302 Query: 231 GVVVGKKALA 240 V +L+ Sbjct: 303 TRAVQSPSLS 312 >gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1] Length = 373 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 9/87 (10%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVV 234 + LTKGCY GQE V+R+ + +R +++ G ++LP +G P+ DD +G +G VV Sbjct: 247 VHLTKGCYRGQETVARVANLGRPPRRQVLLLLDAGDEELPRTGDPVRRDDRTVGRVGTVV 306 Query: 235 -----GKKALA-IARIDKVDHAIKKGM 255 G ALA + R VD + G+ Sbjct: 307 QHHELGPVALALVKRSVPVDAELTAGV 333 >gi|320105946|ref|YP_004181536.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4] gi|319924467|gb|ADV81542.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4] Length = 322 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG---TLGVVVGKKA 238 KGCY+GQE+V RI+ R + + + D+P G+P+ ++ +G ++ + G + Sbjct: 224 KGCYLGQEIVERIRSRGNVHRTFHAFLLSGDIPAPGTPLTAEEKPVGEFTSIATLPGGRT 283 Query: 239 LAIARIDKVDHAIKKGMALTVHG 261 LA+ I + A+ + +ALT G Sbjct: 284 LALGYIRR--EALDRNLALTFPG 304 >gi|91227863|ref|ZP_01262036.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01] gi|91188373|gb|EAS74669.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01] Length = 322 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257 >gi|148652133|ref|YP_001279226.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter sp. PRwf-1] gi|148571217|gb|ABQ93276.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter sp. PRwf-1] Length = 247 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 42/257 (16%) Query: 6 LSNQSF--IKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIE 61 +SN SF I + G A FLQ IT +V LT Y+ A AI +G+I I K + Sbjct: 1 MSNLSFKQITLQGDDAAKFLQGQITVNVNRLTASYQPA---AIANLKGRIEFGLWIKKQD 57 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + F + I L L F K + I+I P G Q TFS ++ Sbjct: 58 DKQFDIVISSDCLAPLQAHLKKFGAFSKFTISEPIDIYPYVGNEAGQAQP-TFSENA--- 113 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN 176 +E+ +D + N+ I + T+F P + + Sbjct: 114 ----------------DEQNMTDWMSASIATGNYWITEAT-----QTLFQPQELRLHQRG 152 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT---LGVV 233 G+ KGCY+GQEV++RI + + + GT P +G + D I++ L Sbjct: 153 GVDYDKGCYLGQEVIARIYFKAAPKAFLHRVKGTGAAPKAGESL--DKIQVVNAIDLADG 210 Query: 234 VGKKALAIARIDKVDHA 250 G +AL +AR ++++ A Sbjct: 211 SGYEALVVARPEQLEQA 227 >gi|269965775|ref|ZP_06179872.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269829643|gb|EEZ83880.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 322 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257 >gi|25029029|ref|NP_739083.1| hypothetical protein CE2473 [Corynebacterium efficiens YS-314] gi|259505980|ref|ZP_05748882.1| aminomethyltransferase, gcvt-like protein [Corynebacterium efficiens YS-314] gi|23494316|dbj|BAC19283.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166461|gb|EEW51015.1| aminomethyltransferase, gcvt-like protein [Corynebacterium efficiens YS-314] Length = 421 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 58/293 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ I+V G A FL I++ V + L QG+I +++ + + F Sbjct: 122 SNRKVIRVDGPDAPAFLNNILSQKVDAAEDGFTARALDLDAQGRIQHTMMVT-VADGVFY 180 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L+ ++ DSLI L S V +E E + + I + +V Sbjct: 181 LDTSATEFDSLIAYLRKMIFWSEVTVE-------------EADLAIITLIGREIPLPEVT 227 Query: 127 LHRT--WGHNEKIA----------------------SDIKTYHELRINHGIVDPNTDFLP 162 RT W +++ + + Y R+ ++P T L Sbjct: 228 FRRTVDWNGPKRVDVAVPRASFESGVDKLLDAGAELTGLMAYWAERVK--ALEPETPDLD 285 Query: 163 STIFPHD-----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPP- 215 + PH+ + L + LTKGCY GQE V+R+ N+ R R M++ D P Sbjct: 286 AKTIPHEIPHWIGRDEHLGAVHLTKGCYRGQETVARVD--NLGRSPRVMVLLHLDGSAPV 343 Query: 216 ---SGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG-MALTV 259 +G+ I + +G LG V+ G AL + + +D + G +A+TV Sbjct: 344 APVTGAEITSGTRTVGRLGTVIHDCDLGPIALGLVKRSALDADLTIGDVAVTV 396 >gi|92113953|ref|YP_573881.1| glycine cleavage T protein (aminomethyl transferase) [Chromohalobacter salexigens DSM 3043] gi|91797043|gb|ABE59182.1| glycine cleavage T protein (aminomethyl transferase) [Chromohalobacter salexigens DSM 3043] Length = 348 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 41/245 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S +++ G A FLQ +A V A +A +P+G++L + ++EE + L + Sbjct: 46 SIMEIAGADAERFLQGQTSAQVTLANGDFAPLTAFCSPKGRMLANGQLMRLEEGRYWLLL 105 Query: 70 DRSKRDSLIDKLL----FYKLR-SNVIIEIQPINGVVLSWNQEHTFSNS---SFIDERFS 121 D + L ++L FYK+ S + + G + E F+ + ++ +R Sbjct: 106 DSELIEPLHEQLAKYAAFYKVEISQPAVRTFGVMGRDAADRLESHFTTAPPETWGMQRVG 165 Query: 122 IADVLLH-----------------RTWGH----NEKIASDIKTYHELRINHGIVDPNT-- 158 A +L H W + + + H+++ + Sbjct: 166 QAVLLRHPGPVARYMVIAPEATALEAWQSLQPTTTAVGNAVWRLHDIQAGLAWLGAAQRD 225 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---TDDLPP 215 +LP + + L GIS KGCY GQEVV+R R ++KR + G + LP Sbjct: 226 SYLPQMLN-----WEALAGISFRKGCYTGQEVVARAHFRGQVKKR--LQRGRLASHVLPA 278 Query: 216 SGSPI 220 G+P+ Sbjct: 279 PGTPV 283 >gi|255075321|ref|XP_002501335.1| predicted protein [Micromonas sp. RCC299] gi|226516599|gb|ACO62593.1| predicted protein [Micromonas sp. RCC299] Length = 370 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 Y + R G+ + + + + P + + LN IS KGCYIGQE+ +R H ++RK Sbjct: 179 AYAQWRYTLGVAEGSEEL--GGLLPLECNLAGLNAISFDKGCYIGQELTARTHHTGVVRK 236 Query: 203 R 203 R Sbjct: 237 R 237 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKI 60 V L+++ +++ G+ AIPFLQ I+T DV +L A +A+ QG++ + + Sbjct: 5 GVSLASRRVLRIAGEEAIPFLQRILTNDVRSLADAGAAPVYAALQNAQGRVRHDLFLHRE 64 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 + ++ +D L+ KLRS V ++ Sbjct: 65 FGGALLADLPADGFKDALDALVKLKLRSPVTLD 97 >gi|68471940|ref|XP_720013.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] gi|74591236|sp|Q5AEF0|CAF17_CANAL RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|46441863|gb|EAL01157.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] Length = 469 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331 >gi|262196877|ref|YP_003268086.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365] gi|262080224|gb|ACY16193.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365] Length = 267 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 33/232 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G FLQ + +AD+ L + IL+ +G+++ ++ ED + Sbjct: 6 SEWGHIRVTGSDRARFLQGMCSADIEALAPGDWTRAVILSVKGRVVSIIEVA-CREDDLL 64 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + D + L + + V E QP++ + W+ + S+ D A Sbjct: 65 ITCQADIADKTLSVLDKHAIMDEVAFEHVAQPMHRI---WD-----TPSAVWDAPPIFAP 116 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISL 180 +I RI G+ VD + D+ FP ++L+D ++ Sbjct: 117 PPGPAASAEQLEI---------RRIEAGMPRYGVDVSEDY-----FPFESLLD--RHVNH 160 Query: 181 TKGCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230 KGCY+GQE VSR+ HR +K R + I G + +P + + + + GT+ Sbjct: 161 KKGCYLGQEPVSRVHHRGGAQKRLRGLRIEGDEPVPAGAAIVHAERAKAGTV 212 >gi|108758208|ref|YP_634466.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622] gi|108462088|gb|ABF87273.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622] Length = 356 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPM 205 LR+ G+ D + +TI P +A +L N IS KGCYIGQEV++R R ++ RK Sbjct: 229 LRVEAGVPRYGQDMVDTTI-PLEA--NLANAISYNKGCYIGQEVIARATFRGHMNRKLTG 285 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234 ++ G D+ P G+ + + ++G L VV Sbjct: 286 LLLGDADVAP-GTELRRGEKKVGWLTSVV 313 >gi|68471677|ref|XP_720145.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] gi|46442000|gb|EAL01293.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] Length = 469 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331 >gi|238880768|gb|EEQ44406.1| conserved hypothetical protein [Candida albicans WO-1] Length = 469 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331 >gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC] gi|330825752|ref|YP_004389055.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601] gi|317116888|gb|ADU99376.1| folate-binding protein YgfZ [Alicycliphilus denitrificans BC] gi|329311124|gb|AEB85539.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601] Length = 313 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 31/223 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+V G+ A FL +T D L + AR +A LT +G++L F+ K + Sbjct: 19 LSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIAFKRNDAEV 78 Query: 66 ILEIDRS------KRDSLI------------DKLLFYKLRSNVIIEIQPINGVVLSWNQE 107 +L R KR S+ D Y L + + P G W + Sbjct: 79 LLVCARELLAPTLKRLSMFVLRAKARLSDATDDFALYGLLGDAARAVLPEGGE--PWAK- 135 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDF 160 +S + + AD W S D + + GI T Sbjct: 136 IDLGEASVV--QLYPADGQPRALWLAPATAGSAPAGAPLDESLWLWSEVRSGIAT-LTAP 192 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + P + + G++ KGCY GQEVV+R Q R +++R Sbjct: 193 VAEAFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 235 >gi|119713593|gb|ABL97644.1| hypothetical protein MBMO_EB0-39H12.0020 [uncultured marine bacterium EB0_39H12] Length = 274 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 44/243 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEEDT 64 L + S +++ G+ + LQ IT+DV A AI +G+++ F +I + Sbjct: 9 LEHLSILELNGEGSFQLLQGQITSDVNKATINNAEIGAICDIKGRVVSSFTVIKNTASEG 68 Query: 65 FILEIDRS---KRDSLIDK--------------LLFYKLRSNVIIEIQPINGVVLSWNQE 107 ++L D+S K + ++ K FY + ++E P + S+ Sbjct: 69 YLLIGDKSVLQKTEEILMKYQPFYDVEIKVNEDFKFYGIHEEYLVEYYPQTDLEKSYQLY 128 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD--PNTDFLPST- 164 +F F+ +++ I L+ + E + D HE++I +D N +F S+ Sbjct: 129 DSFWRIHFLKKKYHI---LITK-----EDLFED---NHEVQIEEWFIDDIQNKNFEISSK 177 Query: 165 ----IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 PH+ L + + KGCY GQE+V+R+ +R +K P + L S S Sbjct: 178 SIGMFTPHELGYHLSSRVDFEKGCYTGQEIVARMHYR--AKKLPSL------LVKSSSTF 229 Query: 221 LTD 223 L D Sbjct: 230 LED 232 >gi|255726752|ref|XP_002548302.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404] gi|240134226|gb|EER33781.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404] Length = 468 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R +G+ + +++ P + +D +NG+SL KGCY+GQE+ R + +IRKR Sbjct: 272 RFENGVFETQDAPKGTSLLPFECNLDYVNGLSLDKGCYVGQELTIRSFNNGVIRKR 327 >gi|313668398|ref|YP_004048682.1| hypothetical protein NLA_10930 [Neisseria lactamica ST-640] gi|313005860|emb|CBN87316.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06] Length = 288 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 32/237 (13%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 14 VSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQDL 72 Query: 74 RDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IADV 125 ++ + +L + LR+ V+ EI G L+ + E + +F E S + V Sbjct: 73 LEATVKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAFTAECVSDGICSVV 132 Query: 126 LLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 L HR H + A HE+R + + T A+ +LN Sbjct: 133 LPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQMLN 184 Query: 177 -----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 185 QHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSE-AEAGTLLTADGEEAG 240 >gi|254785325|ref|YP_003072754.1| folate-binding protein [Teredinibacter turnerae T7901] gi|237684991|gb|ACR12255.1| folate-binding protein [Teredinibacter turnerae T7901] Length = 323 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 46/262 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEE 62 ++LS+ I + G FLQ T D ++ RG A +G++ F+ +KI + Sbjct: 26 IHLSDYRLIVITGPDGEKFLQGQTTCDFRRFEKHQWLRG-AHCNAKGRMHSTFVAAKIGD 84 Query: 63 DTFILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQE----------HTF 110 L + S +S + L Y + ++ + + GV+ + H Sbjct: 85 QQIGLRVHASIAESALKALQKYIVFSKAEARVHTALLVGVLGDAAETTLPFSLPDVGHCD 144 Query: 111 SNSSFIDERFSIADV---LLHRT-----------WGHNEKIASDIKTYHELRINHGIVDP 156 +++ F R A LL+ T W H E + + ++ GI D Sbjct: 145 TSAGFPVLRLEAAAAELWLLNDTHAGIPDQLPGVWAHPE-------CWQQYLLDKGIADV 197 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + + P + L++ +S KGCY GQE+V+R+ +R ++K + + TD Sbjct: 198 TAESV-EELLPQELNYQLVDAVSFDKGCYTGQEIVARMHYRGKLKKH-LYLAETD----- 250 Query: 217 GSPILTDDIEIGTLGVVVGKKA 238 L+ D +G VVG+K Sbjct: 251 ----LSADSTLGFGMDVVGEKG 268 >gi|167627906|ref|YP_001678406.1| hypothetical protein Fphi_1680 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597907|gb|ABZ87905.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 248 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 36/227 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62 +N ++V G I FLQ ++T+D+ L + ++T +G+I+ + + Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLS---DDNNLLMTTFANLKGRIISLCFVKYVSS 62 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120 +L ++++ D+L+ L Y + S V + N++++ F+++ F++ Sbjct: 63 QKLLLSVEQTVIDNLLSWLKKYGMFSKVSFAV----------NEDYSLFFTDNGFLNHDI 112 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGIS 179 + D L ++ E+I I ++L I I N + FLP+ + L ++ +S Sbjct: 113 LVKDAL--KSEIAYEQIQK-INILNKLVI---IDQANVEKFLPAEL----DLDNIEKVVS 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----DLPPS-GSPI 220 TKGCY+GQEV++R+ ++ ++K ++ DL S G P+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLKTSDGKPL 209 >gi|32491186|ref|NP_871440.1| hypothetical protein WGLp437 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166393|dbj|BAC24583.1| ygfZ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 309 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 8/99 (8%) Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 L+ T+ + +K +I +++ + +++P T FP + ++ + I KGCY+ Sbjct: 160 LNNTFYNYKKYLFEI-----IKLKYPVIEPITS---EHFFPQEINLNYFHAIDFNKGCYM 211 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 GQE++ ++Q+ I +K I+ G P I+ + Sbjct: 212 GQELIYKMQYLKIKKKFLYILYGKSSFLPKAGDIIEQKM 250 >gi|213619118|ref|ZP_03372944.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 310 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 3 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 61 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 62 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 119 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 120 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 177 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 178 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 235 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 236 AG----KASRVPEAGEDLEL 251 >gi|329910243|ref|ZP_08275261.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Oxalobacteraceae bacterium IMCC9480] gi|327546229|gb|EGF31267.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Oxalobacteraceae bacterium IMCC9480] Length = 334 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 45/235 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I G A FL +T DV L AR + TP+G++L FL+ + D+ Sbjct: 29 LTDLGLIAFEGDDAANFLHNQLTNDVEHLGIDQARLAGYCTPKGRLLASFLMWRTV-DSI 87 Query: 66 ILEIDRSKRDSLIDKLLFYKLR----------SNVIIEIQPINGVVL--SW------NQE 107 +LE+ R + ++ +L + +R S+ II + SW Sbjct: 88 VLEVARDIQPAIQKRLQMFVMRAKAKSSDLTDSSAIIGLGGDAAGAALASWFPLLPDAPY 147 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------R 148 N++ R + A ++ W +IA I + +L Sbjct: 148 AKVENAAGTVIRLADAGTMVRYQWITTPEIA--IAAWPQLGTTLRQAGTEHWRLTEILAA 205 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 I H + F+P + ++ + G++ KGCY GQE+V+R Q+ +++R Sbjct: 206 IPHITLATQEKFVPQMVN-----LEAIGGVNFRKGCYPGQEIVARSQYLGKLKRR 255 >gi|170733254|ref|YP_001765201.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3] gi|169816496|gb|ACA91079.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3] Length = 310 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 62 Query: 65 -----------------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92 F+L ++K D L +F L V + Sbjct: 63 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDASDTLAVAGFAGNVRDALSGIFDALPDGVHV 121 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGALPVVSPAVWDWLDVRAGEP 180 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 236 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|319943553|ref|ZP_08017835.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599] gi|319743368|gb|EFV95773.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599] Length = 434 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 8/65 (12%) Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--------PMIITGTDDLPP 215 T P ++L+ G++ KGCY GQEVV+R ++R +++R P+ GTD L Sbjct: 285 TFVPQMVNLELVGGVNFKKGCYPGQEVVARSEYRGKVKRRMFAGMCSGPLPEPGTDVLAW 344 Query: 216 SGSPI 220 G+PI Sbjct: 345 DGTPI 349 >gi|331230924|ref|XP_003328126.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307116|gb|EFP83707.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 403 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 34/231 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP------YKIARGSAILTPQGKI----LLYF 55 L ++ I + G+ + FLQ +IT ++ L + A +A LTP G++ +Y Sbjct: 37 LVDRGLISLKGEKSKTFLQGLITNNLNRLSSQEEAHHNTAFYTAFLTPPGRLQFDGFVYP 96 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHT 109 + E +++ + D L+ L + L S V I + + W N + Sbjct: 97 EPPENEAQCLLIDHHLPEADRLLAWLRRFVLNSRVKIS-KDSRELWAVWPNHPLDNIQSL 155 Query: 110 FSNSSFIDERFSIA-------DVLLHRTWGHNEKIA----------SDIKTYHELRINHG 152 NSS +++ + A L +R G+ E + + + Y + H Sbjct: 156 LPNSSLLEQPSNHAWKDHRGDQRLGYRIIGNPESVPELEPLAQLPEAPLSAYALHVLLHA 215 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + P+ P +A +D +G+ KGCY+GQE+ +R H +IRKR Sbjct: 216 SLPPSLSPPYPVTLPFEANLDYHHGVDFRKGCYVGQELTARTYHTGVIRKR 266 >gi|262281154|ref|ZP_06058936.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257385|gb|EEY76121.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 240 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 43/235 (18%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T D L R +AI +G+I + KI ++F + + + + + Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINAESFEIVVVQDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 + + FS + ++ + + H+T Sbjct: 73 EFAKHIKKFG-----------------------AFSKMTLSEQGPAFPKISGHQT--EFS 107 Query: 136 KIASDIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 + +DI + + I G +F P + H G++ KGCY+GQE+V Sbjct: 108 ALETDISEWQKQAIMTGQAWITQATEHEFQPQELRLHQR-----EGVNYDKGCYLGQEIV 162 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238 +R+ + + ++ GT + P + + L +DIE+ G L +VV K A Sbjct: 163 ARLWFKAKPKHWLHLVQGTGEAPAAKAQ-LHNDIEVVNSVANEEGYLALVVAKPA 216 >gi|227112625|ref|ZP_03826281.1| putative global regulator [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 333 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 44/257 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L + + + + G + +LQ +TADV LP A +GK+ + E Sbjct: 28 ISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHILCAHCDAKGKMWSNLRLFHHGEG 87 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSW--NQE 107 +E R+ RD+ +++L Y + S I I+ + V S + E Sbjct: 88 FAFIE-RRNLRDAQLNELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPDAE 146 Query: 108 H--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152 H T + + ERF + LL + +K++ +D + + L I G Sbjct: 147 HPVVQHEGATLLHFAHPAERFLLVLSPEHGASLLEQL---GDKVSLNDSRQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-T 210 P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 204 --QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261 Query: 211 DDLPPSGSPILTDDIEI 227 + +P +G DD+E+ Sbjct: 262 NKVPQAG-----DDLEL 273 >gi|262166511|ref|ZP_06034248.1| glycine cleavage T-protein [Vibrio mimicus VM223] gi|262026227|gb|EEY44895.1| glycine cleavage T-protein [Vibrio mimicus VM223] Length = 290 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S Sbjct: 171 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINTPLS 220 >gi|88608631|ref|YP_506208.1| aminomethyl transferase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600800|gb|ABD46268.1| aminomethyl transferase family protein [Neorickettsia sennetsu str. Miyayama] Length = 310 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + Y +RI I + + P+T FP + MD KGCY+GQEV+SR + R+ I Sbjct: 189 EEYQRIRIMSKISEAGKELKPNT-FPLEYAMDY--AFDFNKGCYVGQEVISRFRIRDFIE 245 Query: 202 KRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAI 241 + + + G I D +G L LA+ Sbjct: 246 RALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAV 286 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILE 68 +F + G+ FLQ IIT +V TL A G ILTP+G+ + + + +T +LE Sbjct: 9 NFYSIGGERVKAFLQGIITCNVETLE-DCAYG-LILTPKGRFICDLFVYRCSTETELLLE 66 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE 93 +R ++L+ L Y + +++I+ Sbjct: 67 TNRCNTEALLRVLDLYNFKRSIVIQ 91 >gi|258622355|ref|ZP_05717380.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585371|gb|EEW10095.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 366 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S Sbjct: 247 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 296 >gi|268684583|ref|ZP_06151445.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268624867|gb|EEZ57267.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|332977316|gb|EGK14104.1| glycine cleavage T protein [Psychrobacter sp. 1501(2011)] Length = 250 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 45/259 (17%) Query: 6 LSNQSF--IKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIE 61 +SN +F I + G+ A FLQ+ +T ++ + L Y A AI +G+I + K Sbjct: 4 VSNLTFKQITLQGEDAGKFLQSQLTVNINKIDLSYIPA---AIANLKGRIEFGIWVKKQA 60 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 ED F + I SL L F K ++ I+I P + QE TFS++ +D Sbjct: 61 EDQFDIVISADCLPSLQAHLKKFGAFSKFTTSEPIDIYPCVLGADTDEQEATFSHN--VD 118 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDL 174 + D++ + L I N+ IV+ + P + + Sbjct: 119 K--------------------CDVEEWKALSIATGNYWIVEATQELFQ----PQELRLHQ 154 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV- 233 G+ KGCY+GQEV++RI + + + G ++P G+ D ++I Sbjct: 155 RGGVDYDKGCYLGQEVIARIYFKASPKAFLHRVKGEGEVPQPGASF--DKVQIVNAIATQ 212 Query: 234 --VGKKALAIARIDKVDHA 250 +G +AL +AR + ++++ Sbjct: 213 DKLGFEALVVARPEHLENS 231 >gi|240013871|ref|ZP_04720784.1| hypothetical protein NgonD_04353 [Neisseria gonorrhoeae DGI18] gi|240121441|ref|ZP_04734403.1| hypothetical protein NgonPI_06688 [Neisseria gonorrhoeae PID24-1] Length = 287 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 71 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 >gi|325920389|ref|ZP_08182320.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865] gi|325549136|gb|EGD20059.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865] Length = 273 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 17/245 (6%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++++ G A+ F A DV L + + LT +G+++ F + + E+DT +L + Sbjct: 2 QYVRLIGMDAVAFAHAQFANDVQALAVGQWQWNTWLTAKGRVIAIFALLR-EDDTHVLML 60 Query: 70 ----DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + + +F + V + G + + ++ + Sbjct: 61 LPDGNAAEIALQLGRFVFRRKLKIVGAALSAYGGFEPAQRAQGAQADIGTQRIELDMGTA 120 Query: 126 LLHRTW--GHNEKIASDIKT------YHELRINHGIVD-PNTDFLPSTIFPHDALMDLLN 176 L RT ++ +A+ I+ + + G+V P+ T P +D L+ Sbjct: 121 ALPRTLLLHTDQALAAPIEVPGVDAQWRRADLQLGLVRLPDAQREQWT--PQQLALDRLH 178 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 S+ KGCY GQE+V+R H KR + + D +G + D IGTL V G Sbjct: 179 AFSVKKGCYPGQEIVART-HFLGKAKRALQLLEVDGAIEAGDAVTLDGTAIGTLVSVAGT 237 Query: 237 KALAI 241 ALA+ Sbjct: 238 LALAV 242 >gi|308389376|gb|ADO31696.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710] Length = 304 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86 Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124 ++ I +L + LR+ V+ EI ++ + + + S + ++D Sbjct: 87 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 146 Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T A+ + Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 256 >gi|325142449|gb|EGC64853.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis 961-5945] gi|325198415|gb|ADY93871.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136] Length = 287 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 22/234 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124 ++ I +L + LR+ V+ EI ++ + + + S + ++D Sbjct: 70 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 129 Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T T + Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239 >gi|325526814|gb|EGD04311.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. TJI49] Length = 266 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 44/270 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59 L+ I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHGVR 62 Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92 + +D F+L ++K D L +F L V + Sbjct: 63 LLVSKDVQAAVQKRLSMFVLRA-KAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVHV 121 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ ++ R + D + G ++ + + ++R Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWVGPRDEV-DARMAALAGKLPVVSPAVWDWLDVRAGEP 180 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 G D +G + D G++V A Sbjct: 236 GDTDTVHAGVELFHSDDPGQPCGMIVNAAA 265 >gi|16761829|ref|NP_457446.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143316|ref|NP_806658.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168236108|ref|ZP_02661166.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737927|ref|YP_002115997.1| putative global regulator [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|213425828|ref|ZP_03358578.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582635|ref|ZP_03364461.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646969|ref|ZP_03377022.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289823826|ref|ZP_06543438.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81513026|sp|Q8Z3X4|YGFZ_SALTI RecName: Full=tRNA-modifying protein ygfZ gi|226730809|sp|B4TUR5|YGFZ_SALSV RecName: Full=tRNA-modifying protein ygfZ gi|25512796|pir||AF0872 conserved hypothetical protein STY3204 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504131|emb|CAD02878.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138950|gb|AAO70518.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194713429|gb|ACF92650.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290686|gb|EDY30040.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 326 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 252 AGK----ASRVPEAGEDLEL 267 >gi|262170581|ref|ZP_06038259.1| glycine cleavage T-protein [Vibrio mimicus MB-451] gi|261891657|gb|EEY37643.1| glycine cleavage T-protein [Vibrio mimicus MB-451] Length = 323 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S Sbjct: 204 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 253 >gi|146312956|ref|YP_001178030.1| putative global regulator [Enterobacter sp. 638] gi|166979585|sp|A4WE49|YGFZ_ENT38 RecName: Full=tRNA-modifying protein ygfZ gi|145319832|gb|ABP61979.1| conserved hypothetical protein [Enterobacter sp. 638] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 40/258 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV L A P+GK+ + + Sbjct: 19 LTLISLDDWALATISGADSEKYLQGQVTADVAQLGEHQHLLVAHCDPKGKMWSNLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------GVVLSWNQEHTFSN-- 112 +D F RS RD+ + +L Y + S V I N G ++ FS Sbjct: 78 RQDGFACIERRSLRDAQLTELKKYAVFSKVTIVADDENVLLGVAGFQARAALKNLFSELP 137 Query: 113 -----------SSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 +S + DERF + AD + G E ++ + + L I Sbjct: 138 DADKPLINDGVTSLLWFEHPDERFLLVTDVATADRVTEALRG--EAQFNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ P D + S F P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGL--PIIDAVNSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAG 253 Query: 210 TDDLPPSGSPILTDDIEI 227 S P +D+E+ Sbjct: 254 N----ASRVPEAGEDLEL 267 >gi|50307117|ref|XP_453537.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74636807|sp|Q6CRA2|CAF17_KLULA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49642671|emb|CAH00633.1| KLLA0D10681p [Kluyveromyces lactis] Length = 462 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 122 IADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 I D+ +G N EK + R G+ D N +++P T+ +A D + I Sbjct: 254 INDIFNCTAFGENPFEKANISATEIQKERFKFGLFDGNHEYIPETLLALEANFDYFEDSI 313 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + KGCY+GQE+ +R +++KR + IT Sbjct: 314 NSDKGCYVGQELTARTFATGVLKKRCVGIT 343 >gi|194098941|ref|YP_002002006.1| hypothetical protein NGK_1381 [Neisseria gonorrhoeae NCCP11945] gi|193934231|gb|ACF30055.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|302831836|ref|XP_002947483.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f. nagariensis] gi|300267347|gb|EFJ51531.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f. nagariensis] Length = 504 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + P D MD L+G+S TKGCY+GQE S +R ++R+R M + Sbjct: 268 VAPLDFNMDQLSGVSYTKGCYVGQERNSFTHYRGVVRRRLMPV 310 >gi|294340169|emb|CAZ88541.1| putative Glycine cleavage T protein (aminomethyl transferase) [Thiomonas sp. 3As] Length = 317 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 30/44 (68%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 +L+ G++ KGCY GQEVV+R Q+R +++R +++G + P Sbjct: 208 ELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVSGPAAMQPG 251 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 44/91 (48%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++ Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 + L +D S + + +L + LR ++ Sbjct: 65 EQIGLLLDVSIAAAALQRLRMFVLRLKCTLD 95 >gi|258626739|ref|ZP_05721561.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580995|gb|EEW05922.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 323 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S Sbjct: 204 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 253 >gi|309379187|emb|CBX22144.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 22/232 (9%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 14 VSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQDL 72 Query: 74 RDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IADV 125 ++ I +L + LR+ V+ EI G L+ + E + +F E S + V Sbjct: 73 LEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPSLAFTAECVSDGICSVV 132 Query: 126 LLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 L HR H + A HE+R + + T T ++ Sbjct: 133 LPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK---ETAVAQMLNQHIIG 189 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 190 GVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSTV-EAGTLLAADGEEAG 240 >gi|240125991|ref|ZP_04738877.1| hypothetical protein NgonSK_07202 [Neisseria gonorrhoeae SK-92-679] Length = 287 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 >gi|239999221|ref|ZP_04719145.1| hypothetical protein Ngon3_07040 [Neisseria gonorrhoeae 35/02] gi|240080433|ref|ZP_04724976.1| hypothetical protein NgonF_03852 [Neisseria gonorrhoeae FA19] gi|240115956|ref|ZP_04730018.1| hypothetical protein NgonPID1_06874 [Neisseria gonorrhoeae PID18] gi|240118253|ref|ZP_04732315.1| hypothetical protein NgonPID_07296 [Neisseria gonorrhoeae PID1] gi|240123801|ref|ZP_04736757.1| hypothetical protein NgonP_07659 [Neisseria gonorrhoeae PID332] Length = 287 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 >gi|161870132|ref|YP_001599302.1| hypothetical protein NMCC_1171 [Neisseria meningitidis 053442] gi|161595685|gb|ABX73345.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 304 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86 Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124 ++ + +L + LR+ + EI ++ + + + S + ++D Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVDAELAASAEPLAAQEPSLVFTAECVSDGICT 146 Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A HE+R + + T A+ + Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 198 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + GS + D E G Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEVGSVLAADGEEAG 256 >gi|240016314|ref|ZP_04722854.1| hypothetical protein NgonFA_03954 [Neisseria gonorrhoeae FA6140] gi|254493985|ref|ZP_05107156.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260440231|ref|ZP_05794047.1| hypothetical protein NgonDG_03921 [Neisseria gonorrhoeae DGI2] gi|268595045|ref|ZP_06129212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268596575|ref|ZP_06130742.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268601621|ref|ZP_06135788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268603962|ref|ZP_06138129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682425|ref|ZP_06149287.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291043527|ref|ZP_06569243.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513025|gb|EEH62370.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548434|gb|EEZ43852.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268550363|gb|EEZ45382.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268585752|gb|EEZ50428.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268588093|gb|EEZ52769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268622709|gb|EEZ55109.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291011990|gb|EFE03979.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|317164506|gb|ADV08047.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae TCDC-NG08107] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|56414994|ref|YP_152069.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615996|ref|YP_001589961.1| putative global regulator [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550067|ref|ZP_02343824.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231154|ref|ZP_02656212.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168242836|ref|ZP_02667768.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445927|ref|YP_002042300.1| putative global regulator [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449722|ref|YP_002047033.1| putative global regulator [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469818|ref|ZP_03075802.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194470174|ref|ZP_03076158.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249201|ref|YP_002147961.1| putative global regulator [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363923|ref|YP_002143560.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386928|ref|ZP_03213540.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353972|ref|YP_002227773.1| global regulator [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858311|ref|YP_002244962.1| global regulator [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|81360906|sp|Q5PJF4|YGFZ_SALPA RecName: Full=tRNA-modifying protein ygfZ gi|189041185|sp|A9N3M5|YGFZ_SALPB RecName: Full=tRNA-modifying protein ygfZ gi|226730802|sp|B5F5H2|YGFZ_SALA4 RecName: Full=tRNA-modifying protein ygfZ gi|226730804|sp|B5QXH5|YGFZ_SALEP RecName: Full=tRNA-modifying protein ygfZ gi|226730805|sp|B5RE09|YGFZ_SALG2 RecName: Full=tRNA-modifying protein ygfZ gi|226730806|sp|B4TGW8|YGFZ_SALHS RecName: Full=tRNA-modifying protein ygfZ gi|226730807|sp|B4T543|YGFZ_SALNS RecName: Full=tRNA-modifying protein ygfZ gi|226730808|sp|B5BFL3|YGFZ_SALPK RecName: Full=tRNA-modifying protein ygfZ gi|56129251|gb|AAV78757.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161365360|gb|ABX69128.1| hypothetical protein SPAB_03796 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404590|gb|ACF64812.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408026|gb|ACF68245.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456182|gb|EDX45021.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456538|gb|EDX45377.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197095400|emb|CAR60959.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212904|gb|ACH50301.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199604026|gb|EDZ02571.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205273753|emb|CAR38748.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324690|gb|EDZ12529.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334562|gb|EDZ21326.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337989|gb|EDZ24753.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206710114|emb|CAR34469.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629086|gb|EGE35429.1| putative global regulator [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 252 AGK----ASRVPEAGEDLEL 267 >gi|168463783|ref|ZP_02697700.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633631|gb|EDX52045.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 252 AGK----ASRVPEAGEDLEL 267 >gi|240113196|ref|ZP_04727686.1| hypothetical protein NgonM_06426 [Neisseria gonorrhoeae MS11] Length = 287 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 71 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 >gi|238909848|ref|ZP_04653685.1| putative global regulator [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 EHDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 252 AGK----ASRVPEAGEDLEL 267 >gi|268599276|ref|ZP_06133443.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583407|gb|EEZ48083.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|59800982|ref|YP_207694.1| hypothetical protein NGO0548 [Neisseria gonorrhoeae FA 1090] gi|293398842|ref|ZP_06643007.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62] gi|59717877|gb|AAW89282.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|291610256|gb|EFF39366.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|149918180|ref|ZP_01906672.1| LigA [Plesiocystis pacifica SIR-1] gi|149820940|gb|EDM80347.1| LigA [Plesiocystis pacifica SIR-1] Length = 330 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 38/260 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58 +S++ +++ + V G+ A FLQ ++TADV L A + +LT +GK++ L+ L + Sbjct: 13 LSALPRQDRAVVHVAGEDAARFLQGLLTADVSALTPGRAIPAGLLTVKGKLVSELWVLAT 72 Query: 59 ---KIEEDTFILEIDRSKRDSLIDKLLF-YKLRSNVIIEIQPINGVVL-----SWNQEHT 109 E++T + ++ + K L + + +V +E L S ++ Sbjct: 73 VDPDDEDETRLALALPAELAESVTKALDDHIIMDDVELETPEPGAAALLLRFGSLSEAKV 132 Query: 110 FSNSSFIDERFSIADVLLHRTW-GHNEKIA-------------SDIKTYHELRINHGIVD 155 + + RF+ A L W G +A +D T+ R++ Sbjct: 133 EAPAGVA--RFTCAHPLAGELWLGSTSALAEAAAALAAAGSQVADAPTFTRARVDQARPA 190 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + P P + ++ +S KGCY+GQE +SRI +R + + + + + PP Sbjct: 191 WGFELTPDRFPPE---IGFVDAVSYAKGCYLGQEPLSRIHNRGQVNRVMVRVMAME--PP 245 Query: 216 SGS----PI--LTDDIEIGT 229 S + PI L +D E+G Sbjct: 246 SQAMADGPIALLAEDKEVGA 265 >gi|268686893|ref|ZP_06153755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627177|gb|EEZ59577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|168823060|ref|ZP_02835060.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340631|gb|EDZ27395.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087478|emb|CBY97243.1| tRNA-modifying protein ygfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVIA--PDDERVLLGVAGFQARAALANVFSV 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TGTDDLPPSGSPILTDDIEI 227 G S P +D+E+ Sbjct: 252 AGK----ASRVPEAGEDLEL 267 >gi|171463581|ref|YP_001797694.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193119|gb|ACB44080.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 335 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 40/233 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY----KIARG------SAILTPQGKILLYF 55 L+ I + G A FLQ +T VL L +A+G +P+G++L Sbjct: 22 LAEWGLIIIEGPDAASFLQNQLTNSVLGLTLTQLGSVAQGFSSTRLVGYCSPKGRLLASA 81 Query: 56 ---LISKIEE--DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHT 109 L S ++ D + L I + S +L + LRS V +I++ V + + Sbjct: 82 WIGLFSSVDSSHDRYALFISKDIAASTAKRLSMFVLRSKVKVIDLSDSWTVAGVYGPNNQ 141 Query: 110 FSNSSFIDERFSI--------ADVLLHRTWGHNEKIASD-------IKTYHELRINHGI- 153 ++S+F D+ ++ +++L + + +D + ++EL + I Sbjct: 142 ITSSNFNDQSMALRLPDVLVGSNLLARIVMAYPNQDQADTPESREILDAWNELEVLSAIP 201 Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I + + G+ KGCY GQE+V+R Q+R I++R Sbjct: 202 RIVAATQEQFVPQMIN-----FESVTGVDFKKGCYPGQEIVARSQYRGSIKRR 249 >gi|226939930|ref|YP_002795003.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter hongkongensis HLHK9] gi|226714856|gb|ACO73994.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter hongkongensis HLHK9] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 46/272 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 V LS+ + + G A FLQ ++ D+ + + A+ S+ T +G++L FL+ Sbjct: 27 VPLSDFAVLDFSGADAETFLQGQLSNDIRQVSPQAAQWSSYSTAKGRMLANFLVWQESGH 86 Query: 58 ----------SKIEE--DTFIL--EIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGV 100 + I++ + FIL ++ +RD L+ L V+ + P G+ Sbjct: 87 YQLMLSAGLAAAIDKRLNMFILRSKVSHRQRDDLVLLGLTGPAAERVMQQSGLAVPATGL 146 Query: 101 VLSWNQEHTFSNSSFI---DERF--SIADVLLHRTW----GHNEKIASDIK-TYHELRIN 150 + T S I + RF ++A W H K A T ++ Sbjct: 147 AV-----ETLSEGCVIRLPEGRFVLALAPAAAMSLWPQLCAHGAKPAPMTNWTLSDIATG 201 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + T P A ++L+ G+S KGCY GQE+V+R Q+ +++R M Sbjct: 202 TPWITQATQ---EAFVPQMANLELIGGVSFQKGCYPGQEIVARTQYLGKVKRR-MFRALA 257 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 D G + + +E G +GK LA+A Sbjct: 258 DAQAMPGDELFS--VETGE--QAIGKVMLAVA 285 >gi|119897884|ref|YP_933097.1| aminomethyltransferase [Azoarcus sp. BH72] gi|119670297|emb|CAL94210.1| conserved hypothetical aminomethyltransferase [Azoarcus sp. BH72] Length = 342 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPILTDDIEIGTLG 231 DL+ G++ KGCY GQE+V+R Q+ ++KR + D +P GS + D + G Sbjct: 234 DLIGGVNFKKGCYPGQEIVARTQYLGTVKKRLYRVALDADSVPTPGSDLYAPDFGEQSAG 293 Query: 232 VVV--------GKKALAIARIDKVD 248 VV G +ALA+ + V+ Sbjct: 294 KVVNVAPSPEGGYEALAVLQNTSVE 318 >gi|240128504|ref|ZP_04741165.1| hypothetical protein NgonS_07711 [Neisseria gonorrhoeae SK-93-1035] Length = 287 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125 ++ + +L + LR+ + EI G L+ + E + +F E S I V Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130 Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +LH R H + A + HE+R + + T T ++ Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 >gi|322613447|gb|EFY10388.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621039|gb|EFY17897.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624103|gb|EFY20937.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628158|gb|EFY24947.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633277|gb|EFY30019.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636145|gb|EFY32853.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639483|gb|EFY36171.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647584|gb|EFY44073.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648768|gb|EFY45215.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653823|gb|EFY50149.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657929|gb|EFY54197.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664032|gb|EFY60231.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668957|gb|EFY65108.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673049|gb|EFY69156.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677960|gb|EFY74023.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681136|gb|EFY77169.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687934|gb|EFY83901.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194870|gb|EFZ80057.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196621|gb|EFZ81769.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202679|gb|EFZ87719.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207834|gb|EFZ92780.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212614|gb|EFZ97431.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214903|gb|EFZ99651.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222634|gb|EGA06999.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225087|gb|EGA09339.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230609|gb|EGA14727.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235040|gb|EGA19126.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239079|gb|EGA23129.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244563|gb|EGA28569.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247178|gb|EGA31144.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253339|gb|EGA37168.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256354|gb|EGA40090.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262470|gb|EGA46026.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267434|gb|EGA50918.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269162|gb|EGA52617.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E D F RS R++ + +L Y + S V+I P + VL Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVIA--PDDERVLLGVAGFQARAALANVFSE 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 S NQ S+ + ERF + A++L + H E ++ + + L Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193 Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251 Query: 208 TG-TDDLPPSGSPI 220 G +P +G + Sbjct: 252 AGKASRVPEAGEDL 265 >gi|262273721|ref|ZP_06051534.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886] gi|262222136|gb|EEY73448.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886] Length = 326 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSG 217 D + P + L+GIS KGCY GQE V+R ++R I ++ ++ G +D P +G Sbjct: 201 DATTNEFIPQALNLQALDGISFKKGCYTGQETVARAKYRGINKRATYLLQGKAEDAPKAG 260 >gi|148243400|ref|YP_001228557.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. RCC307] gi|147851710|emb|CAK29204.1| Predicted aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. RCC307] Length = 279 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 A ++ +LRI+ GI P + L P + + L +SL KGCY+GQE ++++ R Sbjct: 149 ALSLEQQEQLRIHQGIPAPGAE-LREEFNPFE--LGLRQRVSLEKGCYLGQETLAKLHSR 205 Query: 198 NIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230 + +++ R ++ D P G + T E G L Sbjct: 206 DGLKQQLRRFVVADGADAPEPGQQLRTTSGERGAL 240 >gi|170703704|ref|ZP_02894430.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria IOP40-10] gi|170131386|gb|EDS99987.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria IOP40-10] Length = 310 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQ 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92 +L + + + ++ +L + LRS V + Sbjct: 63 LL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVHV 121 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEP 180 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 236 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|172060853|ref|YP_001808505.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MC40-6] gi|171993370|gb|ACB64289.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MC40-6] Length = 344 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 44/273 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------IEED 63 I V G A FL + +T D+ L AR S + +G++L FL + + +D Sbjct: 43 IDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQLLVSKD 102 Query: 64 T----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVIIEIQPIN 98 F+L ++K D L +F L V +++ Sbjct: 103 VQAAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVHVKVDGPA 161 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPN 157 G ++ +I R + D L G ++ + + ++R I P Sbjct: 162 GALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPSVSPAVWDWLDVRAGEPRITQPA 220 Query: 158 TD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLP 214 + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + G D Sbjct: 221 VEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETDTV 275 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 +G + D G++V A +D + Sbjct: 276 HAGIELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|29830571|ref|NP_825205.1| hypothetical protein SAV_4028 [Streptomyces avermitilis MA-4680] gi|29607683|dbj|BAC71740.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 321 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 23/236 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LSN+ + V G+ + +L ++T V LP A + IL+ G I LY + Sbjct: 42 VDLSNRGVVTVTGEDRLSWLHLLLTQHVSELPAHRATEALILSAHGHIEHALYLVDDGT- 100 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113 T ++ +++LI L FY++ R+ + G + + + Sbjct: 101 --TTWAHVEPGTQEALIAYLESMKFFYRVEVADRTGEFAVVHLPAGSIADVPADVVVRET 158 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPHDALM 172 ++ + F L ++ A+ + Y LR+ H P F PH+ L Sbjct: 159 AYGRDLFLPRAEL--ESYADRSGPAAGLLAYEALRVEHH--RPRLGFETDHRTIPHE-LG 213 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224 + + + L KGCY GQE V+R+Q+ +R + + G++ LPP G+ + L DD Sbjct: 214 WIGSAVHLEKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPHGTELRLADD 269 >gi|50083936|ref|YP_045446.1| hypothetical protein ACIAD0714 [Acinetobacter sp. ADP1] gi|49529912|emb|CAG67624.1| conserved hypothetical protein; putative Glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ADP1] Length = 240 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P + + +G+ KGCY+GQE+V+R+ + + ++ G ++P S + L +D+E Sbjct: 138 PQELRLHQRDGVDYDKGCYLGQEIVARLWFKAKPKHWLHLVLGDGEVPVSATK-LNNDVE 196 Query: 227 -IGTLGVVVGKKALAIAR 243 + ++ + G KAL IA+ Sbjct: 197 VVNSIAIASGYKALVIAK 214 >gi|148244472|ref|YP_001219166.1| hypothetical protein COSY_0317 [Candidatus Vesicomyosocius okutanii HA] gi|146326299|dbj|BAF61442.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 223 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 50/225 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +KV G A FLQ ++ D++++ + +A QGK++ F ++K + D F L + Sbjct: 7 LKVSGVDAQSFLQGQLSNDIVSIGENEWQLNAYCQHQGKVIALFWVTKYKND-FYLNFPK 65 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 S +D + L + L S+V I V S+N + DV+ H Sbjct: 66 SLQDKIFKHLHIFVLMSDVEI-------VQTSFN-------------TYPPIDVMKH--- 102 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN-GISLTKGCYIGQE 189 P + S F P + +D+ G++ +KGCY GQE Sbjct: 103 ------------------------PEVYLITSEKFVPQELNLDINEVGVNFSKGCYPGQE 138 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +V+R+ + ++R + L I D + G+VV Sbjct: 139 IVARLHYLGKPKRRMRLFECEQILKVGDKLIALDSKSVKASGIVV 183 >gi|295676545|ref|YP_003605069.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002] gi|295436388|gb|ADG15558.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002] Length = 355 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 40/232 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I G A FL A +T DV L AR + + +G++L FL S DT Sbjct: 48 LSQFGVIDTTGDDAASFLHAQLTNDVQHLDAANARLAGYCSAKGRLLASFL-SWRSGDTI 106 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 L + + + ++ +L + LR+ + V+ + + S D Sbjct: 107 RLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVVGLAGDVRGALSGVFDALPDGVHV 166 Query: 118 ----------------ERF--------SIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152 ER + + LL G ++++ + + ++R Sbjct: 167 QVDGTAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRAGEPR 226 Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 I P + F+P + D+L ++ KGCY GQEVV+R Q+R I++R Sbjct: 227 ITQPVVEQFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRR 273 >gi|253687038|ref|YP_003016228.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259710252|sp|C6D8Y4|YGFZ_PECCP RecName: Full=tRNA-modifying protein ygfZ gi|251753616|gb|ACT11692.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 333 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247 Query: 198 NIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227 ++ + G + +P +G DD+E+ Sbjct: 248 GANKRALYWLAGKANQVPQAG-----DDLEL 273 >gi|88801262|ref|ZP_01116796.1| hypothetical protein MED297_00205 [Reinekea sp. MED297] gi|88775999|gb|EAR07240.1| hypothetical protein MED297_00205 [Reinekea sp. MED297] Length = 254 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 P + +NGIS KGCY GQE V+R ++R I ++ I++G P L Sbjct: 136 PQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQAGDAL 190 >gi|260771932|ref|ZP_05880850.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14] gi|260613224|gb|EEX38425.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 31/228 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + I V G + P+LQ +T +V+ LP + A +GK+ F + D + Sbjct: 26 LEQWAAIYVSGIDSKPYLQGQLTCNVVALPAQQMVYGAHCDAKGKVWSAFRLFH-HRDGY 84 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPI------NGVVLSWNQEHTFSNSSFIDE 118 + S D + +L Y + S V IE Q + L NQ + + + E Sbjct: 85 AMFQPASAVDVELRELKKYAIFSKVAIEQSQDVALGLLGKQAELRLNQFNDCRDDVRVLE 144 Query: 119 RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINHGIV--DPNTDFL 161 + + + R W +++ S+I T E++ IV D + + Sbjct: 145 QGTAVKISAQR-WLLLIKPDSVEALLESMPAQRVNSEIWTRFEIQEALPIVTQDQQNEHI 203 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + + L GIS KGCY GQE V+R ++R I ++ ++ G Sbjct: 204 PQALN-----LQALGGISFNKGCYTGQETVARAKYRGINKRALCLVAG 246 >gi|161506404|ref|YP_001573516.1| putative global regulator [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189041184|sp|A9MRH6|YGFZ_SALAR RecName: Full=tRNA-modifying protein ygfZ gi|160867751|gb|ABX24374.1| hypothetical protein SARI_04602 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 326 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALATITGVDSEKYIQGQVTADVSQMTEQQHLLTAHCDAKGKMWSNLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102 E + F+ RS R++ + +L Y + S V+I P + VL Sbjct: 78 EREGFVWIERRSVREAQLTELKKYAVFSKVVI--APDDDRVLLGVAGFQARAALANVFSD 135 Query: 103 ---SWNQEHTFSNSSFI-----DERF----SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 S NQ S+ + ERF +A V + H E ++ + + L I Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATVNMLTEKLHGEAELNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAG 253 Query: 210 TDDLPPSGSPILTDDIEI 227 S P +D+E+ Sbjct: 254 K----ASRVPEAGEDLEL 267 >gi|94676520|ref|YP_588618.1| putative global regulator [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|118577990|sp|Q1LTU6|YGFZ_BAUCH RecName: Full=tRNA-modifying protein ygfZ gi|94219670|gb|ABF13829.1| glycine cleavage T-protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 325 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 33/57 (57%) Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P ++ L GIS KGCY+GQE ++R ++ N+ +K ++G + P+ S L Sbjct: 211 LLPQALNIEALGGISFNKGCYLGQEAIARTKYHNMNKKELCFLSGKANRIPTASEKL 267 >gi|260771285|ref|ZP_05880212.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972] gi|260613882|gb|EEX39074.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972] Length = 323 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 31/52 (59%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S Sbjct: 204 PQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDS 255 >gi|254388558|ref|ZP_05003792.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197702279|gb|EDY48091.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS++ + V G+ + +L ++T + LP A + IL+ G + LY + + Sbjct: 42 VDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG-- 99 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113 DT ++ ++ LI L FY++ R++ I + G + + + + Sbjct: 100 -DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTET 158 Query: 114 SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPH 168 + E D+ L R ++ + + Y LR+ P F PH Sbjct: 159 VVVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVE--AHRPRVGFETDHRTIPH 216 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224 + L + + L KGCY GQE V+R+Q+ +R + + G++ LP +G+PI L D Sbjct: 217 E-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAAD 275 Query: 225 IEIG-TLGVV--------VGKKALAIARID-KVDHAIKKG 254 E G LG V +G ALA+ + + VD A+ G Sbjct: 276 GEEGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAG 315 >gi|126452702|ref|YP_001066586.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106a] gi|167845302|ref|ZP_02470810.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei B7210] gi|242315915|ref|ZP_04814931.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106b] gi|126226344|gb|ABN89884.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1106a] gi|242139154|gb|EES25556.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106b] Length = 348 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R Sbjct: 217 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 268 Query: 206 ---IITGTD 211 + GTD Sbjct: 269 LAHVAAGTD 277 >gi|224008166|ref|XP_002293042.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971168|gb|EED89503.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 591 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 TY LR GI + ++ T + + LN IS TKGCY+GQE+ +R Q ++RK Sbjct: 290 TYSVLRRLSGIAE-GSELTTRTAL--ECNQEFLNAISFTKGCYLGQELTARSQFVGVVRK 346 Query: 203 R--PMIITGTD 211 R P++I T+ Sbjct: 347 RIVPVMICETE 357 >gi|15676912|ref|NP_274058.1| hypothetical protein NMB1024 [Neisseria meningitidis MC58] gi|7226264|gb|AAF41424.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325140256|gb|EGC62781.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385] gi|325144399|gb|EGC66701.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240013] gi|325200291|gb|ADY95746.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis H44/76] Length = 288 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123 ++ + +L + LR+ + EI V QE + + ++ + Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 130 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T A+ + Sbjct: 131 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 240 >gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1] gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1] Length = 5299 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L ++ ++V G+ FLQ +++ D+ + A +A+LTPQGK L + ++ D Sbjct: 7 VRLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVYTALLTPQGKFLYDLFVVEL-GD 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS 88 F+++ + ++ + L KL YKLRS Sbjct: 66 VFLIDAEAARIEELRKKLSMYKLRS 90 >gi|251791001|ref|YP_003005722.1| folate-binding protein YgfZ [Dickeya zeae Ech1591] gi|247539622|gb|ACT08243.1| folate-binding protein YgfZ [Dickeya zeae Ech1591] Length = 326 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + L GIS TKGCY GQE+V+R ++R Sbjct: 183 NDSRQWLALDIEAG--QPIIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYR 240 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + G P + P D++E+ Sbjct: 241 GANKRALYWLAG----PSTQMPAAGDELEL 266 >gi|297200637|ref|ZP_06918034.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083] gi|197709768|gb|EDY53802.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 100/245 (40%), Gaps = 42/245 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYF------ 55 V LS++ + V G + +L ++T V LP A + IL+ G I LY Sbjct: 42 VDLSHRGVVSVTGDDRLSWLHLLLTQHVSDLPTGQATEALILSAHGHIEHALYLVDDGTT 101 Query: 56 ------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103 LI+ +E F +D + R + L + I E+ GVV+ Sbjct: 102 VWAHVEPGTQDALIAYLESMKFFYRVDVADRTG---EFAVVHLPAGSIAEVP--EGVVV- 155 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LP 162 +E + F+ AD+ ++ A + Y LR+ H P F Sbjct: 156 --RETPYGRDLFLPR----ADL---ESYAEKSGPAVGLLAYEALRVEHH--RPRLGFETD 204 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSP 219 PH+ L + + L KGCY GQE V+R+Q+ +R + + G++ LPP+G+ Sbjct: 205 HRTIPHE-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGAD 263 Query: 220 ILTDD 224 I D Sbjct: 264 IRLAD 268 >gi|116071548|ref|ZP_01468816.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107] gi|116065171|gb|EAU70929.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107] Length = 265 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 20/189 (10%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G+ FLQ +AD+ P + L+ G++ LL + D +L Sbjct: 13 LLRLEGEGTRNFLQGQTSADMTDTPEGALVQTCWLSATGRLRALLEVRLRANGADVLVLA 72 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + D+++F R + +QPI Q S I + D L Sbjct: 73 GDATAVAKGFDQVIFPADR----VRLQPIT------EQRRVQPLSKTITALWLDHDSPLP 122 Query: 129 RTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 +W N + ++ + E R+ G + N D P + L DL +SL+KGC++G Sbjct: 123 PSWTSNPADSKQLERWRIEQRLAFGAGELNADANPFEL----GLTDL---VSLSKGCFLG 175 Query: 188 QEVVSRIQH 196 QE V+++ + Sbjct: 176 QETVAKLAN 184 >gi|294814029|ref|ZP_06772672.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064] gi|326442433|ref|ZP_08217167.1| hypothetical protein SclaA2_15264 [Streptomyces clavuligerus ATCC 27064] gi|294326628|gb|EFG08271.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064] Length = 330 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS++ + V G+ + +L ++T + LP A + IL+ G + LY + + Sbjct: 45 VDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG-- 102 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113 DT ++ ++ LI L FY++ R++ I + G + + + + Sbjct: 103 -DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTET 161 Query: 114 SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPH 168 + E D+ L R ++ + + Y LR+ P F PH Sbjct: 162 VVVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVE--AHRPRVGFETDHRTIPH 219 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224 + L + + L KGCY GQE V+R+Q+ +R + + G++ LP +G+PI L D Sbjct: 220 E-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAAD 278 Query: 225 IEIG-TLGVV--------VGKKALAIARID-KVDHAIKKG 254 E G LG V +G ALA+ + + VD A+ G Sbjct: 279 GEEGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAG 318 >gi|89075098|ref|ZP_01161539.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34] gi|89049185|gb|EAR54750.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34] Length = 327 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 P + +NGIS KGCY GQE V+R ++R I ++ I++G P L Sbjct: 209 PQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQAGDAL 263 >gi|315179108|gb|ADT86022.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218] Length = 326 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 31/52 (59%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S Sbjct: 207 PQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDS 258 >gi|293394597|ref|ZP_06638891.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582] gi|291422906|gb|EFE96141.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582] Length = 329 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%) Query: 139 SDIKTYHELRINHG--IVD-PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 +D + + L I G I+D PN+ + + P + L GIS +KGCY GQE+V+R + Sbjct: 185 NDSQQWLTLDIEAGYPIIDAPNS----AQLIPQATNLQALGGISFSKGCYTGQEMVARAK 240 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 R ++ + G P+ S DD+E+ Sbjct: 241 FRGANKRAMYWLAGKGSRVPAAS----DDLEL 268 >gi|290959378|ref|YP_003490560.1| hypothetical protein SCAB_49691 [Streptomyces scabiei 87.22] gi|260648904|emb|CBG72018.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 43/246 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYF------ 55 V LS++ I V G+ + +L ++T V LP A + IL+ G I LY Sbjct: 42 VDLSHRGVIAVSGEDRLSWLHLLLTQHVSELPVGEATEALILSANGHIEHALYLVDDGTT 101 Query: 56 ------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103 L++ +E F +D + R D + L + I +I P VV Sbjct: 102 VWAHAEPGTREALLAYLESMKFFYRVDVADR---TDDVAVVHLPAGSITQI-PAGTVV-- 155 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LP 162 +E + F+ AD+ ++ A + Y LR+ H P F Sbjct: 156 --RETPYGRDLFLPR----ADL---ESFAEKAGPAVGLLAYEALRVEHH--RPRLGFETD 204 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSP 219 PH+ L + + L KGCY GQE V+R+Q+ +R + + G++ LPP G+ Sbjct: 205 HRTIPHE-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPRGAE 263 Query: 220 I-LTDD 224 + L DD Sbjct: 264 LRLADD 269 >gi|162454476|ref|YP_001616843.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56'] gi|161165058|emb|CAN96363.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56'] Length = 332 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 10/125 (8%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + LR+ + + DF FP +A ++ +S +KGCY+GQE V +Q R +K Sbjct: 192 AWEVLRVENNVPRFGVDFDDQN-FPQEASIED-RAVSFSKGCYLGQETVFMLQARGHAKK 249 Query: 203 R--PMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256 R + + G +P L D +G + V G LA+ + K HA+ +G A Sbjct: 250 RLVQLAVEGEGGVPAGAEIALPDGAAVGAVTSQVEDPRGTGLLALGYV-KYKHAV-QGTA 307 Query: 257 LTVHG 261 L V G Sbjct: 308 LRVAG 312 >gi|289548965|ref|YP_003473953.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484] gi|289182582|gb|ADC89826.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484] Length = 301 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L ISL KGCY+GQE ++R+ +R R +++ + L G + D ++GT+ Sbjct: 204 LRYAISLNKGCYVGQEAIARVYYRGRT-PRTLVLLQAEGL-REGEKLFDGDKQVGTV-TS 260 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 VG + A+ + +V HA K+ + T G VK Sbjct: 261 VGSEGYALGYVLRV-HAQKEKVLYTPEGTAVK 291 >gi|254507542|ref|ZP_05119676.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16] gi|219549612|gb|EED26603.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 37/234 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57 +L++ I + G +LQ +T DV+TL + A +GK+ F + Sbjct: 24 THLTSWGAISMIGDDKKSYLQGQVTCDVVTLEQTQSTFGAHCDAKGKVWSVFRLFHHNGG 83 Query: 58 --------------SKIEEDTFILEIDRSKRDSLI-----DKLLFY-KLRSNVIIEIQPI 97 +++++ ++D ++ D ++ ++ F+ SN +++PI Sbjct: 84 YAMVQPKSAIDVELTELKKYAIFSKVDIAQSDDVLFGVMGEQATFWVDSLSNETGDVRPI 143 Query: 98 NG-VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 +G + + I S+ +L + + +++ + TY+E+ V Sbjct: 144 DGGTAVKVGPQRWL----LIVSEASVESLLANCS---AQRVEESLWTYYEIEAALPFV-- 194 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 ++ + P + + GIS TKGCY GQE V+R ++R + ++ I+ GT Sbjct: 195 -SNEQQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKRAMFIVKGT 247 >gi|83718935|ref|YP_442673.1| glycine cleavage T-protein superfamily protein [Burkholderia thailandensis E264] gi|257138886|ref|ZP_05587148.1| glycine cleavage T-protein superfamily protein [Burkholderia thailandensis E264] gi|83652760|gb|ABC36823.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis E264] Length = 348 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 43/243 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 L + V G A FL +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 65 -----------------FILEIDRSKRDSLIDKL--------------LFYKLRSNVIIE 93 F+L D+ + +F L + + Sbjct: 101 LLVSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFDALPDGIHTK 160 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + G ++ + +I R + D L ++++ + + ++R Sbjct: 161 VDAPAGALVRLPDAAGRARYLWIAARAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 154 VD-PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IIT 208 V P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 220 VTLPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAV 274 Query: 209 GTD 211 GTD Sbjct: 275 GTD 277 >gi|271499205|ref|YP_003332230.1| folate-binding protein YgfZ [Dickeya dadantii Ech586] gi|270342760|gb|ACZ75525.1| folate-binding protein YgfZ [Dickeya dadantii Ech586] Length = 326 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + L GIS TKGCY GQE+V+R ++R Sbjct: 183 NDSRQWLALEIEAG--RPVIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYR 240 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + G+ + +P + D++E+ Sbjct: 241 GANKRALYWLAGSG----AQTPAVGDELEL 266 >gi|209517029|ref|ZP_03265877.1| folate-binding protein YgfZ [Burkholderia sp. H160] gi|209502560|gb|EEA02568.1| folate-binding protein YgfZ [Burkholderia sp. H160] Length = 350 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 42/276 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I G A FL + +T D+ L AR + + +G++L FL S DT Sbjct: 43 LSQFGVIDTTGDDAASFLHSQLTNDIQHLDAANARLAGYCSAKGRLLASFL-SWRSGDTI 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 L + + + ++ +L + LR+ + V+ + + S D Sbjct: 102 RLLVSKDVQAAVQKRLSMFVLRAKAKLTDTSGELAVIGLAGDVRGALSGVFDALPDGVHV 161 Query: 118 ----------------ERF--------SIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152 ER + + LL G ++++ + + ++R Sbjct: 162 QVDGAAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRAGEPR 221 Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209 I P + F+P + D+L ++ KGCY GQEVV+R Q+R I++R + + G Sbjct: 222 ITQPVVEQFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 276 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 D G+ + D G++V + +D Sbjct: 277 ELDTVRPGTEVFHSDDPGQPCGMIVSAASAQAGGVD 312 >gi|157372133|ref|YP_001480122.1| putative global regulator [Serratia proteamaculans 568] gi|166979587|sp|A8GIQ4|YGFZ_SERP5 RecName: Full=tRNA-modifying protein ygfZ gi|157323897|gb|ABV42994.1| glycine cleavage T protein (aminomethyl transferase) [Serratia proteamaculans 568] Length = 330 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 40/258 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP +GK+ + Sbjct: 20 LTLISLEDWALVTLNGPDRVKYLQGQVTADIEALPADSHVLCGHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLS-- 103 E LE RS DS + ++ Y + S + I + GV S Sbjct: 80 GEGFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAADSEAVLLGVAGFQARAALAGVFNSLP 138 Query: 104 -------WNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + E T + S ERF ++A+ L+ + H + +D + + L I Sbjct: 139 DAEHQVVQDGETTLLHFSLPAERFLLVTTAAVAEQLVDKL--HEQAELNDSQQWLTLDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + L+GIS +KGCY GQE+V+R + R ++ + G Sbjct: 197 AGY--PVIDAANSGQFIPQATNLQALDGISFSKGCYTGQEMVARAKFRGANKRALYWLEG 254 Query: 210 TDDLPPSGSPILTDDIEI 227 P + +D+E+ Sbjct: 255 KAGRVPQAA----EDVEL 268 >gi|55379206|ref|YP_137056.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049] gi|55231931|gb|AAV47350.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049] Length = 361 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 E ++ D+ ++ D L++R G N + +T+ L + G P D Sbjct: 187 EESYDVVCSADDAETVFDTLVNR--GLN-AVPFGYQTWETLTLEAGT--PLFDTEIEGAL 241 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P+D + L N + KGCY+GQEVVSRI++R +R ++ + P G+ + D Sbjct: 242 PND--LGLRNALDFEKGCYVGQEVVSRIENRGHPTQR-LVGLAVEACPDPGAAVFAGDEH 298 Query: 227 IG 228 +G Sbjct: 299 VG 300 >gi|119776082|ref|YP_928822.1| hypothetical protein Sama_2950 [Shewanella amazonensis SB2B] gi|119768582|gb|ABM01153.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 31/234 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + V G+ F+ +TAD+ L R A P+G++L F K+ + Sbjct: 24 LNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWGAHCDPKGRMLATFRTFKLGDALM 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +LE RS + + +L Y + S + +L + + F+ F A+ Sbjct: 84 MLE-PRSALEVSLAQLKKYAVFSKAELVDMSSELTLLGVSGPEA---AGFVARHFGTAEA 139 Query: 126 LLHRTWGHN---------------------EKIASDI---KTYHELRINHGIVDPN-TDF 160 + T EK + + L I G PN Sbjct: 140 DVFSTEQGTVLKDGERFILILDKANACALIEKSGQPLYGAGVWQALEIRAGY--PNIAAG 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 S P + L GIS KGCY+GQE V+R ++R ++ I+ G P Sbjct: 198 HASEYIPQMCNLQALGGISFNKGCYMGQETVARTKYRGGNKRALYILFGESQTP 251 >gi|316984646|gb|EFV63610.1| glycine cleavage T protein [Neisseria meningitidis H44/76] gi|325134208|gb|EGC56857.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M13399] gi|325206147|gb|ADZ01600.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M04-240196] Length = 287 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 22/234 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123 ++ + +L + LR+ + EI V QE + + ++ + Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 129 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T T + Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239 >gi|145296576|ref|YP_001139397.1| hypothetical protein cgR_2484 [Corynebacterium glutamicum R] gi|140846496|dbj|BAF55495.1| hypothetical protein [Corynebacterium glutamicum R] Length = 373 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 132 Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117 L+ ++ D+LI K++F+ S V +E + ++ QE + ++ F +D Sbjct: 133 LDTSAAEFDTLIGFLTKMIFW---SEVTVEEADL-AIITLLGQEISLPDAVFARRVDWNG 188 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169 R +A + G ++ + + K Y R+ D TI PH+ Sbjct: 189 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 247 Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220 + L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I Sbjct: 248 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 304 Query: 221 LTDDIEIGTLGVVV 234 +G LG VV Sbjct: 305 KAGARTVGRLGTVV 318 >gi|269140276|ref|YP_003296977.1| glycine cleavage T protein [Edwardsiella tarda EIB202] gi|267985937|gb|ACY85766.1| glycine cleavage T protein [Edwardsiella tarda EIB202] gi|304560103|gb|ADM42767.1| Folate-dependent protein [Edwardsiella tarda FL6-60] Length = 332 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%) Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +D + L I GI +P+ D FLP + + L GIS +KGCY GQE+V+R Sbjct: 186 ADSAQWLALDIEAGIPLIDEPSCDRFLPQAVN-----LQALGGISFSKGCYSGQEMVARA 240 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++R R+ + G+ + P S +D+E+ Sbjct: 241 KYRGANRRALFWLRGSAERLPHAS----EDLEL 269 >gi|167738162|ref|ZP_02410936.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 14] Length = 172 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R Sbjct: 41 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 92 Query: 206 ---IITGTD 211 + GTD Sbjct: 93 LAHVAAGTD 101 >gi|262371763|ref|ZP_06065042.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262311788|gb|EEY92873.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 240 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 30/230 (13%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A FLQ +T V L +R +AI +G+I I K+ ++F L + + Sbjct: 13 GVDAQKFLQGQVTIHVERLALNESRYTAICDLKGRIHFGLWIKKLNTESFELVTTHDQAE 72 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 + + S ++++ I V F I FS NE Sbjct: 73 EFAKHIKKFGAFSK--MKLEEIGSV---------FPTIHGIQTEFS-----------SNE 110 Query: 136 KIASDIKTYH--ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 +DI T+ ++ + T+ L P + + +G+ KGCY+GQE+V+R Sbjct: 111 ---TDIYTWQIEAIKSGQAWISKTTEHL---FQPQELRLHQRDGVHFDKGCYLGQEIVAR 164 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 + + + +I DLP + + D + ++ + G AL IA+ Sbjct: 165 LWFKAKPKHWLHLIHAKGDLPAPATQLNKDVEVVNSVNINDGYLALVIAK 214 >gi|50119703|ref|YP_048870.1| putative global regulator [Pectobacterium atrosepticum SCRI1043] gi|81646141|sp|Q6D961|YGFZ_ERWCT RecName: Full=tRNA-modifying protein ygfZ gi|49610229|emb|CAG73672.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 333 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247 Query: 198 NIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227 ++ + G + +P +G DD+E+ Sbjct: 248 GANKRALYWLAGKANKVPQAG-----DDLEL 273 >gi|291333966|gb|ADD93643.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C694] Length = 99 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+ +++ G FLQ +++ D+ L + SA+LTPQGK + F + I+ D Sbjct: 5 LNNRKILELKGSDCKKFLQNLVSNDINLLDQGLVY-SALLTPQGKYIADFFVVPID-DGM 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95 +++ +L+D+L YKLRS+V I+ Q Sbjct: 63 RIDVHAELAKTLLDRLNIYKLRSDVEIKKQ 92 >gi|167815348|ref|ZP_02447028.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 91] Length = 178 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R Sbjct: 47 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 98 Query: 206 ---IITGTD 211 + GTD Sbjct: 99 LAHVAAGTD 107 >gi|167581611|ref|ZP_02374485.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis TXDOH] Length = 348 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 43/243 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 L + V G A FL +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 65 -----------------FILEIDRSKRDSLIDKL--------------LFYKLRSNVIIE 93 F+L D+ + +F L + + Sbjct: 101 LLVSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGLAGDVRAALSGIFDALPDGIHTK 160 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + G ++ + +I R + D L ++++ + + ++R Sbjct: 161 VDAPAGALVRLPDAAGRARYLWIAARAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 154 VD-PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IIT 208 V P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 220 VTLPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAV 274 Query: 209 GTD 211 GTD Sbjct: 275 GTD 277 >gi|254430061|ref|ZP_05043768.1| folate-binding protein YgfZ [Alcanivorax sp. DG881] gi|196196230|gb|EDX91189.1| folate-binding protein YgfZ [Alcanivorax sp. DG881] Length = 315 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 102/220 (46%), Gaps = 36/220 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISKIEEDTF 65 + I+ G+ A +LQ ++ D+ +++ G + L+ +G+ L+ I + + D + Sbjct: 31 AVIRAYGEEAGHYLQGQLSCDL----HEVDNGGHLTGMHLSLKGRGLVSVRIVQ-DGDDY 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQE--HTFSNSSFID 117 ++ + +++I L+ Y+LR+ V ++ ++G + + + E + N + Sbjct: 86 LMLCPAGQSEAVIKSLMKYRLRAKVEFQVDEQAVLMGLSGALPATSPEPGQSGRNGQGLW 145 Query: 118 ERFSIADVLL--------HRTWG--HNEKIASDIKTYHELRIN--HGIVDPNTD--FLPS 163 R+ D L W ++ A++ + + I+ G+V P + FLP Sbjct: 146 LRYPNTDHALLITDTEQAESVWTVLALDRAATNANGWRQADIDAGEGMVYPGAEDLFLPQ 205 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + D+ G++ KGCY GQEVV+R+ + +++R Sbjct: 206 VLN-----YDVTAGVNFKKGCYTGQEVVARMHFKGKLKQR 240 >gi|294624876|ref|ZP_06703533.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665039|ref|ZP_06730346.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600835|gb|EFF44915.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605196|gb|EFF48540.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 273 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + T +G + D Sbjct: 169 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETGAAVNAGDAVALDGSA 227 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266 IGT+ V G ALA+ ++ + G AL HG R +A Sbjct: 228 IGTVVSVAGNLALAVLPLELT---LDAGTALQAGTHGARPRA 266 >gi|301027408|ref|ZP_07190745.1| folate-binding protein YgfZ [Escherichia coli MS 69-1] gi|300394916|gb|EFJ78454.1| folate-binding protein YgfZ [Escherichia coli MS 69-1] Length = 295 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 37/247 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + D F Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFR-DGDGF 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID-- 117 RS R+S + +L Y + S VII + + G + FS + Sbjct: 62 AWIERRSVRESQLTELKKYAVFSKVIIAPDDERVLLGVAGFQARAALANIFSELPSKEKQ 121 Query: 118 ----------------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF-- 177 Query: 156 PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDL 213 P D S F P + L GIS KGCY GQE+V+R + R ++ ++TG+ L Sbjct: 178 PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRL 237 Query: 214 PPSGSPI 220 P +G + Sbjct: 238 PEAGEDL 244 >gi|171319766|ref|ZP_02908853.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MEX-5] gi|171095002|gb|EDT40027.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MEX-5] Length = 310 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/279 (20%), Positives = 106/279 (37%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVR 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92 +L + + + ++ +L + LRS V + Sbjct: 63 LL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVRNALSGIFDALPDGVHV 121 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGTLPVVSPAVWDWLDVRAGEP 180 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVP 235 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + + G+VV A +D + Sbjct: 236 GETDTVHAGVELFHSEDAGQPCGMVVNAAAAPAGGVDAL 274 >gi|270264911|ref|ZP_06193175.1| putative global regulator [Serratia odorifera 4Rx13] gi|270041209|gb|EFA14309.1| putative global regulator [Serratia odorifera 4Rx13] Length = 328 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 36/256 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLEDWALVTLSGPDRVKYLQGQVTADIEALAADRHVLCAHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLS-- 103 ED LE RS DS + ++ Y + S + I + + GV S Sbjct: 80 GEDFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAVDSEAVLLGVAGFQARAALAGVFNSLP 138 Query: 104 -------WNQEHTFSNSSFIDERF---SIADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152 + E T + S ERF + A V T NE+ +D + + L I G Sbjct: 139 DAEHQVVQDGETTLLHFSAPAERFLLVTTAAVAEQLTVKLNEQAELNDSQQWLTLDIEAG 198 Query: 153 IVDPNTDFLPS-TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 P D S + P + L GIS +KGCY GQE+V+R + R ++ + G Sbjct: 199 Y--PVIDAANSGQLIPQATNLQALEGISFSKGCYTGQEMVARAKFRGANKRALYWLEGN- 255 Query: 212 DLPPSGSPILTDDIEI 227 P+ +D+E+ Sbjct: 256 ---AGRVPLAAEDLEL 268 >gi|296157857|ref|ZP_06840691.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1] gi|295892103|gb|EFG71887.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1] Length = 357 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 DI+ E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R Sbjct: 221 DIRA-GEPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGT 271 Query: 200 IRKRPMI--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 I++R + + G D +G+ + D G+VV + +D Sbjct: 272 IKRRTSLANVAGEPDSVRAGAELFHSDDPGQPCGMVVNAASAPEGGVD 319 >gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99] gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 363 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+Q N+ + M++ G+ D P +G +L + +G + Sbjct: 241 IGAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSTDRPSTGDSVLAGERSVGRV 298 Query: 231 GVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKASFP 269 G VV G ALA+A R D A+ G T+ + S P Sbjct: 299 GTVVDHVDLGPVALALAKRGLPADTALMTGAEATIPALIDAQSLP 343 >gi|85712969|ref|ZP_01044008.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina baltica OS145] gi|85693207|gb|EAQ31166.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina baltica OS145] Length = 299 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 16/219 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + V G A FLQ +TA+V L SA P GK L F + ++ F Sbjct: 19 LASYGLLSVTGDDARSFLQGQLTANVNALKPGDLCYSAHCEPTGKTLSVFWLYCHSDNEF 78 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSFIDERFS 121 L + S + + Y + + V E + + G+V S ++ N + + + Sbjct: 79 WLILKHSAIAPSLAQFEKYGVFNKVTFEDKSSDLNLIGLVGS-SETFELPNEADLIAKLK 137 Query: 122 IAD-----VLLHRTWGHNEKIASDIKTYHELRINHGIVDPN-TDFLPSTIFPHDALMDLL 175 + VL++++ + SD K + L I V P L P + Sbjct: 138 VGSEPNQFVLVYKS---EIESNSDEKLWDALEIER--VRPQLISELTQQFVPQMLNVQAW 192 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +GI KGCYIGQE V+R+++ ++ ++GT +P Sbjct: 193 DGIDFKKGCYIGQETVARMRYLGKQKRALFRVSGTAHVP 231 >gi|90580316|ref|ZP_01236123.1| hypothetical protein VAS14_20331 [Vibrio angustum S14] gi|90438618|gb|EAS63802.1| hypothetical protein VAS14_20331 [Vibrio angustum S14] Length = 327 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 37/244 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + +LQ +T D+++L + +A +GK+ I I+ Sbjct: 29 LDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVMRIFHIDNGYG 88 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L+ ++ + I +L Y + S +I VVL + E S ID F+ +D Sbjct: 89 YLQ-RQTVMATQIPELKKYAVFSKT--DINQSTDVVLGLSGEQA---QSAIDNYFTGSDD 142 Query: 126 LLHRT-----------W------GHNEKIA---------SDIKTYHELRINHGI--VDPN 157 + H W H E +A +D ++ I + V+ Sbjct: 143 VRHNDTATAVKVDNLRWFIITPIEHAEAVAQHFAANATLTDTALWNLYDIKAALPRVEAA 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P Sbjct: 203 TEL---EFIPQAMNLQSVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259 Query: 218 SPIL 221 L Sbjct: 260 GDAL 263 >gi|257094049|ref|YP_003167690.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046573|gb|ACV35761.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 338 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 51/235 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I V G A FL +T+D+ L A+ SA + +G++L FL+ + D + Sbjct: 43 LTHLRLIAVGGPEAAVFLHNQVTSDIKHLATDAAQHSAWCSAKGRMLASFLVFRSGAD-Y 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------ 107 L++ ++ +L + LRS V I V LS N+E Sbjct: 102 QLQLSADLLTMIVKRLQMFVLRSKVTI-------VDLSGNREIFGLAGPHAVEALQALGL 154 Query: 108 -------HTFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149 +T S+ + RF I A L R H + + + + +++ Sbjct: 155 PVPDGPLNTAVGSAGLVIRLDSARFQIVTSTEDAAALWRRLAAHARPVGTAVWQWLDIQA 214 Query: 150 NHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 ++ T +F+P A + L G+S KGCY GQE+++R Q+ +++ Sbjct: 215 GIPLITERTREEFVPQM-----ANFERLGGVSFHKGCYPGQEIIARTQYLGKVKR 264 >gi|323526019|ref|YP_004228172.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001] gi|323383021|gb|ADX55112.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001] Length = 375 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 14/111 (12%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 DI+ E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R Sbjct: 239 DIRA-GEPRITQPVVE---QFVPQMVN-----FDVLGAVNFKKGCYPGQEVVARSQYRGT 289 Query: 200 IRKRPMI--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 I++R + + G D +G+ + D G+VV A AR VD Sbjct: 290 IKRRTSLANVAGELDSVKAGAELFHSDDPGQPCGMVVNA---ASARHGGVD 337 >gi|256821968|ref|YP_003145931.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069] gi|256795507|gb|ACV26163.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069] Length = 312 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 24/228 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + I+V G A FLQ +T D+ + + A QG++ F K +D + Sbjct: 30 LGHYGIIRVHGGDAHKFLQGQLTCDLDKVTDQQASLGGFCNVQGRLHGIFFTIKYGDD-Y 88 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----SSFIDERF 120 +L + + + L++KL Y + V + ++ + Q+ +N S + Sbjct: 89 LLLVPKEGLEHLLNKLKMYAVFFKVELTDASLDFQIWGHTQKGATTNFAEDMSLVVTRDK 148 Query: 121 SIADVLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDFLPS 163 + ++ L+ + + IA +D+ + + I I + L Sbjct: 149 GVTEIHLNSLFNASFMIAEKEDGSAIIKALEGTTLADVNAWDYIEIQAHIPLVFEETLEE 208 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + PH + + G+S KGCY GQE+V+R+ +R ++ ++ D Sbjct: 209 -LLPHFIGLPQVGGVSFDKGCYTGQEIVARMHYRGKLKTHALLAYSKD 255 >gi|227328389|ref|ZP_03832413.1| putative global regulator [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 333 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 44/257 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L + + + + G + +LQ +TADV LP A +GK+ + E Sbjct: 28 ISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHTLCAHCDAKGKMWSNLRLFHHGEG 87 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSW--NQE 107 +E R+ RD+ + +L Y + S I I+ + V S + E Sbjct: 88 FAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPDVE 146 Query: 108 H--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152 H T + + ERF + + LL + +K++ +D + L I G Sbjct: 147 HPVVQHEGATLLHFAHPAERFLLVLSPEHSASLLEQL---GDKVSLNDSCQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-T 210 P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 204 --QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261 Query: 211 DDLPPSGSPILTDDIEI 227 + +P +G DD+E+ Sbjct: 262 NKVPQAG-----DDLEL 273 >gi|303286257|ref|XP_003062418.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455935|gb|EEH53237.1| predicted protein [Micromonas pusilla CCMP1545] Length = 363 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 35/156 (22%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 Y R G+ + + +T P + ++ L+G+S KGCYIGQE+ +R ++RK Sbjct: 206 AYRRHRYLRGVAEGTAEL--ATRLPLECNLEGLHGVSFDKGCYIGQELTARTHFVGVVRK 263 Query: 203 RPMIIT------------------GTDDLPPSGSPILTDDIEIGTLGVVV---GKKALAI 241 R I + PSGS E G +G VV G LA+ Sbjct: 264 RLAPIAFRSAEDAAAALASGGTVHSSAAAGPSGS-----KRERGGVGKVVAVEGDVGLAM 318 Query: 242 ARIDKVDHAIKKGMALTVHG-----VRVKASFPHWY 272 R+ + + M TV G + AS P W+ Sbjct: 319 MRVAAIGSDAR--MWATVDGGGEVEIETPASAPSWW 352 >gi|289676642|ref|ZP_06497532.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae FF5] Length = 281 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +T +D+ P L + +G VV Sbjct: 233 LYRLTLSDEEIPQPGTALFSPVHASAVGNVV 263 >gi|261820171|ref|YP_003258277.1| global regulator [Pectobacterium wasabiae WPP163] gi|261604184|gb|ACX86670.1| folate-binding protein YgfZ [Pectobacterium wasabiae WPP163] Length = 333 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + G + P DD+E+ Sbjct: 248 GANKRALYWLAGKANRVPQAG----DDLEL 273 >gi|170718457|ref|YP_001783673.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus somnus 2336] gi|168826586|gb|ACA31957.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus somnus 2336] Length = 277 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 L I V G A FLQ +T DV K+A G + LT P+GK+ F + + Sbjct: 5 LKQYGLIYVEGVDAEKFLQGQLTCDVT----KLAIGQSTLTAHCDPKGKVNSLFRLIRHA 60 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFIDER 119 E F L I + + + +L Y + S V + I G++ + I + Sbjct: 61 EQQFYLLIRQDLLNHGLAQLKKYAVFSQVTFSEKNWTIVGML-----DQDLKECGAISPQ 115 Query: 120 FSIADVLLHRTWGHNEKIA----SDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171 I D+ + +K++ D + + L + G + +F+P + L Sbjct: 116 IRI-DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTIIGQGEFIPQAL----NL 170 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 ++ IS KGCYIGQE ++R ++R I KR M + Sbjct: 171 QEIEQAISFQKGCYIGQETIARAKYRG-INKRAMYL 205 >gi|330964532|gb|EGH64792.1| hypothetical protein PSYAC_07740 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 293 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +D++P G+ + + Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230 >gi|218768283|ref|YP_002342795.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491] gi|121052291|emb|CAM08620.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491] Length = 288 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124 ++ + +L + LR+ + EI G L + E + N +F ++ S I Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 130 Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + L T + A + HE+R + + T A+ + Sbjct: 131 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +GS + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAADGEEAG 240 >gi|113461437|ref|YP_719506.1| aminomethyl transferase [Haemophilus somnus 129PT] gi|112823480|gb|ABI25569.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 277 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 29/216 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61 L I V G A FLQ +T DV K+A G + LT P+GK+ F + + Sbjct: 5 LKQYGLIYVEGVDAEKFLQGQLTCDVT----KLAIGQSTLTAHCDPKGKVNSLFRLIRHA 60 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFIDER 119 E F L I + + + +L Y S V + I G++ + I + Sbjct: 61 EQQFYLLIRQDLLNHGLAQLKKYAFFSQVTFSEKNWTIVGML-----DQDLKECGAISPQ 115 Query: 120 FSIADVLLHRTWGHNEKIA----SDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171 I D+ + +K++ D + + L + G + +F+P + L Sbjct: 116 IRI-DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTIIGQGEFIPQAL----NL 170 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 ++ IS KGCYIGQE ++R ++R I KR M + Sbjct: 171 QEIEQAISFQKGCYIGQETIARAKYRG-INKRAMYL 205 >gi|313127513|ref|YP_004037783.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] gi|312293878|gb|ADQ68338.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] Length = 364 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ L N + KGCY+GQEVVS++++R +R ++ + LP SG+ + D +G + Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSKVENRGRPSQR-LVGLRPEALPESGAAVFNGDSSVGEV 302 >gi|213026049|ref|ZP_03340496.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 200 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 106 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 163 Query: 192 SRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G +P +G +D+E+ Sbjct: 164 ARAKFRGANKRALWLLAGKASRVPEAG-----EDLEL 195 >gi|28871370|ref|NP_793989.1| hypothetical protein PSPTO_4228 [Pseudomonas syringae pv. tomato str. DC3000] gi|213971130|ref|ZP_03399249.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301381854|ref|ZP_07230272.1| hypothetical protein PsyrptM_04440 [Pseudomonas syringae pv. tomato Max13] gi|302059023|ref|ZP_07250564.1| hypothetical protein PsyrptK_03467 [Pseudomonas syringae pv. tomato K40] gi|28854621|gb|AAO57684.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213924119|gb|EEB57695.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 315 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +D++P G+ + + Sbjct: 233 LYRLTLRSDEIPAPGTALFS 252 >gi|38234484|ref|NP_940251.1| hypothetical protein DIP1917 [Corynebacterium diphtheriae NCTC 13129] gi|38200747|emb|CAE50450.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 353 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 58/279 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G+ A FL +++ ++ LP+ A + L QG ++ + I +E F Sbjct: 45 SHRGVLCISGEDAAVFLNNLVSQKLIDLPHPWAGEALDLDIQGHVVHHMEIIATDE-VFY 103 Query: 67 LEIDRSKRDSL---IDKLLFYKLRSNVIIEIQPINGVVLSW-NQEH-----------TFS 111 + + ++ +SL +++F+ S V IE+ I+ V+S + +H + Sbjct: 104 VHVPAAQLESLHTFFTRMIFW---SKVTIEV--IDAAVISVISAQHLDALVDVPLPEALA 158 Query: 112 NSSFIDERFSIADVLLHRT---------WGHNEKIASDIKTYHELRINHGIVDPNTDF-L 161 S ID D+L+ R H + A + Y R+ V P + Sbjct: 159 VSPVIDFSLPRRDILVPRASLMAVAASLQEHGFQPAG-MMAYTAARVRS--VQPVMSLDM 215 Query: 162 PSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTD 211 +T PH+A D + + L KGCY GQE V R++ N+ R +++ Sbjct: 216 DATTIPHEAASLIGRGDHIGAVHLNKGCYRGQETVGRVE--NLGRSPRVLVMVLIDGSAP 273 Query: 212 DLPPSGSPI------------LTDDIEIGTLGVVVGKKA 238 + P +P+ + DD E+G +G+ V K++ Sbjct: 274 EQPHPAAPLTAGGRTVGFLGTVVDDFELGPIGLAVVKRS 312 >gi|317493828|ref|ZP_07952245.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918155|gb|EFV39497.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium 9_2_54FAA] Length = 328 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%) Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS-TIFPHDALMDLLNGIS 179 S+A+ L+ + G + +D + + EL I G P D S + P + LNGI Sbjct: 169 SMAEALVEKLQGSAQ--FNDSQQWVELDIEAG--QPVIDVENSGQLIPQATNLQALNGIC 224 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 KGCY GQE+V+R ++R ++ + G+ S P +D+E+ Sbjct: 225 FKKGCYTGQEMVARAKYRGANKRALYWLQGS----ASRVPQAGEDLEL 268 >gi|330950069|gb|EGH50329.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae Cit 7] Length = 230 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V NT +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 93 QIRVGIGQVFGNTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 147 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +++P G+ + + Sbjct: 148 LYRLTLSGEEIPQPGTALFS 167 >gi|145300371|ref|YP_001143212.1| aminomethyltransferase related to GcvT [Aeromonas salmonicida subsp. salmonicida A449] gi|142853143|gb|ABO91464.1| predicted aminomethyltransferase related to GcvT [Aeromonas salmonicida subsp. salmonicida A449] Length = 303 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + L+GIS TKGCY+GQE V+R ++R + ++ GT P + L +I++G Sbjct: 193 LQALDGISFTKGCYMGQETVARAKYRGANNRALFVLAGTASEPVACGDAL--EIQLG 247 >gi|332525885|ref|ZP_08402026.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2] gi|332109436|gb|EGJ10359.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2] Length = 318 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 ++L+ G++ KGCY GQE+V+R Q+R +++R + P G + D G Sbjct: 204 LELVGGVNFQKGCYPGQEIVARSQYRGTLKRRAFLFDADAPAAP-GQDVYAADDPAQPAG 262 Query: 232 VVV-------GKKALAIARIDKVDHAIKKGMAL 257 +VV G A A+ K+ A+ G+AL Sbjct: 263 MVVAAAPAPDGSGAWAVLAETKI-AALADGVAL 294 >gi|78066664|ref|YP_369433.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. 383] gi|77967409|gb|ABB08789.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. 383] Length = 344 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59 L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLGSFLTWRAGHGVR 96 Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92 + +D F+L ++K D L +F L V + Sbjct: 97 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVRDVLSGIFDALPDGVHV 155 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L ++ + + ++R Sbjct: 156 KVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALGSSLPVVSPAVWDWLDIRAGEP 214 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQE+V+R Q+R I++R + + Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAHVA 269 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|21231578|ref|NP_637495.1| hypothetical protein XCC2133 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768300|ref|YP_243062.1| hypothetical protein XC_1980 [Xanthomonas campestris pv. campestris str. 8004] gi|188991439|ref|YP_001903449.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris str. B100] gi|21113265|gb|AAM41419.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573632|gb|AAY49042.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733199|emb|CAP51397.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris] Length = 290 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 22/268 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + ++++ G A+ F A DV L + +A LT +G+++ F + + E+ Sbjct: 15 LHDMQYVRLSGPDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLRDEDAQL 74 Query: 66 ILEIDRSKRDSLIDKLLFY----KLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++ + + +L + KLR + + + Q H + I+ Sbjct: 75 LMLLPDGNAAEIAAQLGRFVFRRKLRITEIALTAQGAFAAPARAQAAHADVAADAIE--L 132 Query: 121 SIADVLLHRTW--GHNEKIASDI------KTYHELRINHGIVD-PNTDFLPSTIFPHDAL 171 + L RT ++ +A+ I + + G+V P+T T P Sbjct: 133 DMGSPALPRTLVLRASDTLAAPIDLPNMDAAWRRADLQLGLVRLPDTQREQWT--PQQLA 190 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D L+ S+ KGCY GQE+V+R H KR + + TD G + D E+G++ Sbjct: 191 LDQLHAFSVKKGCYPGQEIVART-HFLGKAKRAVHLLETDAAVAPGDAVRLDGAEVGSVV 249 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTV 259 ALA+ ++ AI+ GM L+ Sbjct: 250 SCAENVALAVL---PLELAIEAGMTLSA 274 >gi|87118920|ref|ZP_01074819.1| Glycine cleavage T protein [Marinomonas sp. MED121] gi|86166554|gb|EAQ67820.1| Glycine cleavage T protein [Marinomonas sp. MED121] Length = 301 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/224 (19%), Positives = 87/224 (38%), Gaps = 29/224 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTFILEID 70 +K+ G + FLQ + D L A+ +G+++ ++ + + ++ IL D Sbjct: 26 LKLSGADTVKFLQGQTSCDFSALSQTQGLQGAVCNIKGRVIANFYALQQADDILLILASD 85 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADVLLHR 129 L++ L + + V + +N + E+ FS I E F L Sbjct: 86 ------LVETLQSHLKKYAVFFKTALVNATQ-DYQIEYIFSQDKLIPQEDFPYPCQELEH 138 Query: 130 TWGHNEKIASDIKTYHELRINH-----GIVDPNTDFL---------------PSTIFPHD 169 + +++ Y +R G+ D N + + P Sbjct: 139 NHSLIQICEANVNQYLSIRPTQSSRALGLPDLNDELIGLNLISGHAIINKETSEKFIPQM 198 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 M +G++ KGCY GQE+V+R+Q+R ++K + + + L Sbjct: 199 LNMQFTHGVNFKKGCYTGQEIVARMQYRGNLKKHLYLFSAANTL 242 >gi|302132822|ref|ZP_07258812.1| hypothetical protein PsyrptN_15597 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 293 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +D++P G+ + + Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230 >gi|223590165|sp|A5DQ50|CAF17_PICGU RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|190348778|gb|EDK41303.2| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC 6260] Length = 436 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 26/40 (65%) Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 +I P + +D NG+SL KGCY+GQE+ R + IRKR Sbjct: 270 SILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309 >gi|117619784|ref|YP_855333.1| chain A, Ygfz protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561191|gb|ABK38139.1| chain A, Ygfz Protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 301 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + L+GIS TKGCY+GQE V+R ++R + +++GT P + L +I++G Sbjct: 191 LQALDGISFTKGCYMGQETVARAKYRGANNRALFVLSGTATTPVASGDTL--EIQLG 245 >gi|330502433|ref|YP_004379302.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01] gi|328916719|gb|AEB57550.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01] Length = 313 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 35/220 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + V G A FLQ +T ++ L + A TP+G++L F I ++ D + Sbjct: 10 LDHEGLLAVRGADAAKFLQGQVTCNLNYLSASQSSLGARCTPKGRMLSSFRIVPVD-DGY 68 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHT 109 +L + R +S L Y + S + + G+ L + Sbjct: 69 LLAMARELIESQQADLQKYAVFSKSKLSDESAAWVRFGLAGGDAVLGELGLQLGTASDSI 128 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNT 158 S I R S L E++ + ++R G V T Sbjct: 129 TSAGPLIAVRLSDGRAELWAPAAETEQLQGRLAAALPQAPLNDWLLAQVRAGVGQVFGAT 188 Query: 159 D--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 F+P I + L G+S KGCY GQE+V+R+Q+ Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQY 223 >gi|325266245|ref|ZP_08132924.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC 33394] gi|324982207|gb|EGC17840.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC 33394] Length = 282 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 22/239 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF-ILEID 70 I+V G FL + D+ L K A + TP+G+++ L ++ F IL D Sbjct: 11 IRVTGDDRHEFLHNQFSNDIKNLSEKTACYATYNTPKGRVIANMLAYCADDAVFLILAAD 70 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNSSFIDERFSIADVLLH 128 +++ + +L + LR+ V +E+ GV L N + + + + A + Sbjct: 71 LAEK--VAKRLRMFVLRAKVQMEVLADWGVAGCLPENAPVVYPSEPKLQLSCNEAGQIEL 128 Query: 129 RTWG-----------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 G ++ A HE+ + + T T + G Sbjct: 129 PHGGCLTLAPKSDLPAHDAAAESAWNRHEILCGYPWISAATS---ETCVAQMLNQHTIGG 185 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 + KGCY GQE+++R Q+R + KR + + P+G P+ D + G+V+ + Sbjct: 186 VHFRKGCYPGQEIIARAQYRGQV-KRGLAVAENAVPQPAGVPV--QDAQQAEAGIVINQ 241 >gi|146412820|ref|XP_001482381.1| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC 6260] Length = 436 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 26/40 (65%) Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 +I P + +D NG+SL KGCY+GQE+ R + IRKR Sbjct: 270 SILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309 >gi|331015591|gb|EGH95647.1| hypothetical protein PLA106_06430 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 293 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +D++P G+ + + Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230 >gi|167619726|ref|ZP_02388357.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis Bt4] Length = 174 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTD 211 D++ G++ KGCY GQEVV+R Q+R I++R + GTD Sbjct: 61 FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTD 103 >gi|124516642|gb|EAY58150.1| putative aminomethyltransferase [Leptospirillum rubarum] Length = 334 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 45/233 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G+ FLQ I + D+L K S L P+ +IL ED L Sbjct: 27 IFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIALFPPA 85 Query: 72 SKRDSLID---KLLFYKLRSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDER 119 R+ ++ K LF++ ++ + I + P VL ++ FS SSF + Sbjct: 86 GTREEFVNHLKKYLFFRTKAKITDMSDHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145 Query: 120 FSIADVLLHRT-WGHN-------------EKIASDIKTYHELRINHG------------I 153 + VL+H T + HN ++ + K+ + N G + Sbjct: 146 -NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSNKGGVLLDESSYLAYL 204 Query: 154 VDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + PS + FP +A +D + G+S KGCY+GQE V+R++ + + + Sbjct: 205 TEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNR 256 >gi|158334606|ref|YP_001515778.1| glycine cleavage T protein [Acaryochloris marina MBIC11017] gi|158304847|gb|ABW26464.1| glycine cleavage T protein, putative [Acaryochloris marina MBIC11017] Length = 354 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 K + +LR++ G P+ + L P +A L IS KGCYIGQE ++R+ ++ Sbjct: 217 KVWEQLRVSEGRPKPDAE-LTEDFNPLEA--GLWQTISFDKGCYIGQETIARLNTYQGVK 273 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMAL 257 +R I + + +PI +D ++G L +V G L + D + + Sbjct: 274 QRLWGIQLGESVSVD-TPITLEDKKVGVLTSLVETAEGPVGLGYVKTKAGDAGAQVSVG- 331 Query: 258 TVHGVRVKASF---PHW 271 TV G V+ F P W Sbjct: 332 TVTGTLVEVPFLTYPQW 348 >gi|62181559|ref|YP_217976.1| putative global regulator [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584838|ref|YP_002638636.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|75481001|sp|Q57K67|YGFZ_SALCH RecName: Full=tRNA-modifying protein ygfZ gi|254814151|sp|C0PY21|YGFZ_SALPC RecName: Full=tRNA-modifying protein ygfZ gi|62129192|gb|AAX66895.1| putative aminomethyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469365|gb|ACN47195.1| hypothetical protein SPC_3108 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716040|gb|EFZ07611.1| putative global regulator [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 326 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PAIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267 >gi|330981456|gb|EGH79559.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 293 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +T +D+ P L + +G VV Sbjct: 211 LYRLTLSDEEIPQPGTALFSPVHASAVGNVV 241 >gi|172038986|ref|YP_001805487.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp. ATCC 51142] gi|171700440|gb|ACB53421.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp. ATCC 51142] Length = 368 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 8/120 (6%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P+ + L P +A L + IS KGCYIGQE ++R+ ++ Sbjct: 232 RVWQQLRIKQGRPYPDQE-LTEDYNPLEA--GLWSSISFDKGCYIGQETIARLNTYQGVK 288 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTV 259 +R + T + +G+ ++ DD ++G L + + ++ L +A + A +G+ +T+ Sbjct: 289 QRLWGVKLTQPV-KAGNTVMVDDKKVGILTSSIQLEEECLGLAYVKT--KAGGEGLKVTI 345 >gi|121634976|ref|YP_975221.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18] gi|120866682|emb|CAM10434.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18] gi|261392454|emb|CAX50003.1| putative aminomethyl transferase [Neisseria meningitidis 8013] gi|325132534|gb|EGC55227.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190] gi|325138308|gb|EGC60877.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis ES14902] Length = 288 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IA 123 ++ + +L + LR+ + EI G L+ + E + +F E S + Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPCLAFTAECGSDGICS 130 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+ + + T A+ + Sbjct: 131 VVLPHRGILHIAPETALPPYDAAAENAWRLHEILSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 240 >gi|291086195|ref|ZP_06355083.2| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220] gi|291068505|gb|EFE06614.1| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220] Length = 306 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 40/253 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + D F Sbjct: 3 LDDWALATITGADSEKYIQGQVTADVSQMTEHQHVLAAHCDAKGKMWSNLRLFR-NSDGF 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID-- 117 R+ RD+ + +L Y + S V+I + + G + FS D Sbjct: 62 AWLERRNLRDAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFSELPNSDKQ 121 Query: 118 ----------------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 ERF + A+ L+ + G E ++ + + L I GI Sbjct: 122 VISEGACTILWFEHPAERFLLIVDVATAESLVEKLRGEAE--LNNSQQWLALDIEAGI-- 177 Query: 156 PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 P D S F P + L GIS KGCY GQE+V+R + R ++ + GT Sbjct: 178 PVIDTANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGT---- 233 Query: 215 PSGSPILTDDIEI 227 S P +D+E+ Sbjct: 234 ASRVPEAGEDLEL 246 >gi|187923927|ref|YP_001895569.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN] gi|187715121|gb|ACD16345.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN] Length = 357 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R Sbjct: 226 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTS 277 Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 + + G D +G+ + D G+VV + +D Sbjct: 278 LANVAGELDTVHAGAELFHSDDPGQPCGMVVNAASAPDGGVD 319 >gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] gi|118175099|gb|ABK75995.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] Length = 359 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 11/78 (14%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ N+ R M++ G+ D P +G P+L +G L Sbjct: 239 VGAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSSDRPATGDPVLAGGRTVGRL 296 Query: 231 GVVV-----GKKALAIAR 243 G VV G ALA+ + Sbjct: 297 GTVVDHVDDGPIALALVK 314 >gi|323495995|ref|ZP_08101059.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326] gi|323318957|gb|EGA71904.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326] Length = 322 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 39/238 (16%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ +L++ I + G+ +LQ +T DV+TL + A +GK+ F + Sbjct: 21 LALAHLTSWGAINMVGQDKKSYLQGQVTCDVVTLAEDQSTFGAHCDAKGKVWSAFRLFH- 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLSWNQ 106 D + + +S D+ + +L Y + S V I IQ I+ + S Sbjct: 80 HNDGYAMLQPKSAIDAELVELKKYAIFSKVEITQSQDIVLGLVGQNAIQFIDTITESRGD 139 Query: 107 EHTFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGI--- 153 F + + +R+ LL + +++ S I + L I + Sbjct: 140 VRPFPGGTAVMVDQQRW-----LLMLSEESAQQLCSSISAPLVDEALWTRLDIEAALPVL 194 Query: 154 -VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + T+ +P + + + GIS TKGCY GQE V+R ++R I ++ ++ G+ Sbjct: 195 GAEQQTEHIPQALN-----LQAIGGISFTKGCYTGQETVARAKYRGINKRAMYMVKGS 247 >gi|115351883|ref|YP_773722.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria AMMD] gi|115281871|gb|ABI87388.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria AMMD] Length = 344 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59 L I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQ 96 Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92 + +D F+L ++K D L +F L + + Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVREALSGIFDALPDGMHV 155 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ++ G ++ +I R + D L G ++ + + ++R Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEP 214 Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208 I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 G D +G + D G++V A +D + Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|301168528|emb|CBW28118.1| putative aminomethyltransferase [Bacteriovorax marinus SJ] Length = 510 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 30/249 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ S V G+ F Q T D+++L P + A +A + GKI +FL K + Sbjct: 19 LSDWSVYCVKGEDREKFFQGQTTNDLMSLNPNEFAL-NARVDRTGKIQFFFLNIKTSNEL 77 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122 + L +S S I++L + + +V IE L N TF + D +F Sbjct: 78 Y-LAFPKSIAQSAIEELDKFIIMDDVEIE-------ALDKNLYFTFLTTEASDNKFEGML 129 Query: 123 ----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 A + +++I+++ Y L + +G D + + L DL GI Sbjct: 130 YGVPATLSFEEIDKESKEISNEEIEY--LCVENGWPRWGVDITAGDLINNTRLNDL--GI 185 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S TKGC++GQE V++I++ P +T PS +EIG + K Sbjct: 186 SYTKGCFLGQETVAKIENGRGASFYPSFLT-----SPS-----VQKLEIGVFKINDRKGG 235 Query: 239 LAIARIDKV 247 I++I V Sbjct: 236 EVISKIGNV 244 >gi|170692440|ref|ZP_02883603.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M] gi|170142870|gb|EDT11035.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M] Length = 358 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 13/105 (12%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R Sbjct: 227 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTS 278 Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + + G D +G + D G+VV A AR VD Sbjct: 279 LANVAGELDTVKAGVELFHSDDPGQPCGMVVNA---ASARDGGVD 320 >gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 360 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 11/77 (14%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ N+ + M++ G+ D P +G P+L D +G LG Sbjct: 239 GAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGSVDRPSTGDPVLADGRAVGRLG 296 Query: 232 VVV-----GKKALAIAR 243 VV G ALA+ + Sbjct: 297 TVVDHVDLGPVALALVK 313 >gi|307545134|ref|YP_003897613.1| aminomethyltransferase [Halomonas elongata DSM 2581] gi|307217158|emb|CBV42428.1| K06980 [Halomonas elongata DSM 2581] Length = 360 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPIL 221 + L GIS KGCY GQEVV+R R ++KR M + LP GS +L Sbjct: 247 EALGGISFKKGCYTGQEVVARAHFRGQVKKRLMRAQLEGEQLPEPGSAVL 296 >gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] Length = 368 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTL 230 L + + L KGCY GQE V+R+ + +R +++ + LP +G+P+ ++G + Sbjct: 243 LTSAVHLAKGCYRGQETVARVHNLGRPPRRLVLLHLDGLAEQLPEAGTPVQLGARDVGRV 302 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G VV L + + V ++ LTV G R Sbjct: 303 GSVVRHHELGVVALALVKQSVAMDAELTVAGARA 336 >gi|119503977|ref|ZP_01626058.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2080] gi|119459980|gb|EAW41074.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2080] Length = 318 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 36/226 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ ++ +++ G+ A FLQ TAD + A +G+++ F ++ +T Sbjct: 22 LAQEALLRLEGQDACKFLQGQTTADFGQVNALDVIPGAFCDVKGRVIADFRALIVDPETV 81 Query: 66 ILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 IL + S D L L+F K N E P GV S H F +D++ + Sbjct: 82 ILCVMESLADLLSGHLTKYLMFSKAELNRTPE--PPWGVAGS-EAHHHFD----VDQKLT 134 Query: 122 IAD--VLLHRTW----GHNEK--IASDIKTYHELRINHGIVDPN---------------- 157 + + W GH I D K + +N+ +D Sbjct: 135 EGNRAAAVAAGWLIPLGHQTSLLIPEDAKQVG-INLNNKSIDEFESAWRALACLRGEARI 193 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 T P D DL +S KGCY GQE+++R+ R ++R Sbjct: 194 TSSTTGKYLPQDLSYDLAGWVSFDKGCYTGQEIIARLHWRGTPKRR 239 >gi|148359116|ref|YP_001250323.1| aminomethyltransferase-like glycine cleavage T protein [Legionella pneumophila str. Corby] gi|148280889|gb|ABQ54977.1| aminomethyltransferase-like glycine cleavage T protein [Legionella pneumophila str. Corby] Length = 329 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 196 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 250 Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230 ++ + +D+ SG + +DIE+G L Sbjct: 251 TLKHELKKFVIQSDNQLYSGQKLFKSDEDIEVGEL 285 >gi|152995116|ref|YP_001339951.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas sp. MWYL1] gi|150836040|gb|ABR70016.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas sp. MWYL1] Length = 309 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 31/53 (58%) Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 TI P M GIS TKGCY GQE+V+R+Q++ +K+ + T +L + Sbjct: 197 TILPQWLNMQSTGGISFTKGCYTGQEIVARMQYKGKSKKQLTLATWQGNLDAT 249 >gi|307729686|ref|YP_003906910.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003] gi|307584221|gb|ADN57619.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003] Length = 374 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 13/105 (12%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R Sbjct: 243 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTS 294 Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + + G D +G + D G+VV A AR VD Sbjct: 295 LANVAGELDTVKAGVELFHSDDPGQPCGMVVNA---ASARDGGVD 336 >gi|254805066|ref|YP_003083287.1| hypothetical protein NMO_1104 [Neisseria meningitidis alpha14] gi|254668608|emb|CBA06179.1| conserved hypothetical protein [Neisseria meningitidis alpha14] Length = 288 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 98/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123 ++ + +L + LR+ + EI V QE + + ++ + Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 130 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T A+ + Sbjct: 131 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 240 >gi|86159270|ref|YP_466055.1| LigA [Anaeromyxobacter dehalogenans 2CP-C] gi|85775781|gb|ABC82618.1| LigA [Anaeromyxobacter dehalogenans 2CP-C] Length = 304 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 32/246 (13%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++F++V GK A +L + T D+ L A +A L +G +L + + E ++ Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGEAAYAAFLNAKGHLLGEGHV-LVREGEILV 79 Query: 68 EIDRS---KRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-D 117 E+D + + +L++KL+ F L + + P+ G + + Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDL--SATLRALPVLGPEGPARLAGRAGAAPVVPS 137 Query: 118 ERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPSTIFP 167 R V + G E + + D+ LRI G+ D + ++ P Sbjct: 138 ARRGAPCVDVWAPAGEAEALRAALVADGAAPLDLAELESLRILAGVARFGAD-MDASRLP 196 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS---GSPILTDD 224 +A + IS TKGCYIGQEVV R R +++ + + +LPP G+P++ Sbjct: 197 MEAGLTR-AAISFTKGCYIGQEVVLRATARGHLQRGLVQL----ELPPGAGPGTPLVAGG 251 Query: 225 IEIGTL 230 E+G + Sbjct: 252 QEVGAV 257 >gi|319786898|ref|YP_004146373.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1] gi|317465410|gb|ADV27142.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1] Length = 267 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P ++ L S++KGCY GQE+V+R +++ ++ D + P GS ++ D+ Sbjct: 163 PQQLGLERLQAYSVSKGCYPGQEIVARTHFLGKAKRQLALLQVADAVAP-GSEVVQDERA 221 Query: 227 IGTLGVVVGKK---ALAI 241 +GT+ V GK ALA+ Sbjct: 222 MGTVVAVAGKAPRWALAV 239 >gi|291303154|ref|YP_003514432.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728] gi|290572374|gb|ADD45339.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728] Length = 344 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 20/148 (13%) Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +DE + + L TW Y LRI G+ D TI PH+ + L+ Sbjct: 201 LDETIAALGLPLAGTW-----------AYDTLRIPQGLPAFGVDTDHRTI-PHEVVSLLV 248 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPS-GSPILTDDIEIGTLGV 232 + L KGCY GQE V+R+ + + I + GT++ PP G ++ D +G +G Sbjct: 249 TAVHLDKGCYRGQETVARVHNLGKPPRATSILHLDGTEEQPPKPGDEVMLDGRAVGRVGT 308 Query: 233 VV-----GKKALAIARIDKVDHAIKKGM 255 G ALA+ R + D K M Sbjct: 309 AGRHYEDGMIALALLRRNVRDKTDAKLM 336 >gi|45185401|ref|NP_983118.1| ABR170Wp [Ashbya gossypii ATCC 10895] gi|74695271|sp|Q75D53|CAF17_ASHGO RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|44981090|gb|AAS50942.1| ABR170Wp [Ashbya gossypii ATCC 10895] Length = 462 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204 R+ G+++ ++ + P + DL + +S KGCY+GQE+ +R ++RKR P Sbjct: 293 RLRRGVLEGVSELRSEAVLPLEVNFDLYEDAVSFDKGCYVGQELTARTHATGVLRKRCAP 352 Query: 205 MIITGTDDL 213 +I++ + L Sbjct: 353 VIVSNSASL 361 >gi|331664472|ref|ZP_08365378.1| tRNA-modifying protein YgfZ [Escherichia coli TA143] gi|331058403|gb|EGI30384.1| tRNA-modifying protein YgfZ [Escherichia coli TA143] Length = 326 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|300995669|ref|ZP_07181197.1| folate-binding protein YgfZ [Escherichia coli MS 200-1] gi|300304777|gb|EFJ59297.1| folate-binding protein YgfZ [Escherichia coli MS 200-1] gi|324005551|gb|EGB74770.1| folate-binding protein YgfZ [Escherichia coli MS 57-2] gi|324011751|gb|EGB80970.1| folate-binding protein YgfZ [Escherichia coli MS 60-1] Length = 305 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 246 >gi|261253910|ref|ZP_05946483.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891] gi|260937301|gb|EEX93290.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891] Length = 322 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Query: 137 IASDIKTYHELRINHGIVDP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +A D+ T H+++ +++ + +P I + ++GIS KGCY GQE V+R Sbjct: 177 VAEDLWTLHDIQSGTPLLNAEQQNEHIPQAIN-----VQAVDGISFKKGCYTGQETVARA 231 Query: 195 QHRNIIRKRPMIITGTDD 212 ++R + ++ I+ G+ D Sbjct: 232 KYRGMNKRALFIVQGSAD 249 >gi|289804664|ref|ZP_06535293.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 281 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 133 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 190 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 191 ARAKFRGANKRALWLLAG----KASRVPEAGEDLEL 222 >gi|170720249|ref|YP_001747937.1| hypothetical protein PputW619_1063 [Pseudomonas putida W619] gi|169758252|gb|ACA71568.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 313 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGT 210 ++ P + F+P I + L+G+S KGCY GQE+V+R+Q+ +++R ++ Sbjct: 184 VMGPTRELFIPQMIN-----LQALDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLLLDQ 238 Query: 211 DDLPPSGSPILT 222 D+P G+ I + Sbjct: 239 QDIPAPGAQIFS 250 >gi|304396719|ref|ZP_07378599.1| folate-binding protein YgfZ [Pantoea sp. aB] gi|304355515|gb|EFM19882.1| folate-binding protein YgfZ [Pantoea sp. aB] Length = 328 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 139 SDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +D + + L I GI +DP T P + L+ IS KGCY GQE+V+R ++ Sbjct: 184 NDSQQWLALDIEAGIPVIDPATSV---QFIPQATNLQALDAISFKKGCYAGQEMVARAKY 240 Query: 197 RNIIRKRPMIITG-TDDLPPSGSPI 220 R ++ + G LP + +P+ Sbjct: 241 RGANKRALYWLAGQASHLPEANAPL 265 >gi|167836301|ref|ZP_02463184.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia thailandensis MSMB43] Length = 160 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R Sbjct: 29 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRR 78 >gi|330877446|gb|EGH11595.1| hypothetical protein PSYMP_17900 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 293 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +D++P G+ + + Sbjct: 211 LYRLTLLSDEIPAPGTALFS 230 >gi|332087725|gb|EGI92852.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 155-74] Length = 305 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 246 >gi|213162057|ref|ZP_03347767.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 254 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 106 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 163 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 164 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 195 >gi|204928215|ref|ZP_03219415.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322537|gb|EDZ07734.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 326 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 44/257 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L + + + G + ++Q +TADV + + +A +GK+ + + E D Sbjct: 22 IALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR-ERD 80 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------------------- 102 F RS ++ + +L Y + S V+I P + VL Sbjct: 81 GFAWIERRSVHEAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSELPN 138 Query: 103 SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 S NQ S+ + ERF + A++L + H E ++ + + L I Sbjct: 139 SENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALDIEA 196 Query: 152 GIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 197 GI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DDLPPSGSPILTDDIEI 227 S P +D+E+ Sbjct: 255 ----ASRVPEAGEDLEL 267 >gi|325130373|gb|EGC53139.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis OX99.30304] Length = 287 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 48/239 (20%), Positives = 98/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123 ++ + +L + LR+ + EI V QE + + ++ + Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 129 Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 VL HR H + A + HE+R + + T A+ + Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 181 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239 >gi|27364925|ref|NP_760453.1| putative aminomethyltransferase [Vibrio vulnificus CMCP6] gi|81448625|sp|Q8DC85|YGFZ_VIBVU RecName: Full=tRNA-modifying protein ygfZ gi|27361071|gb|AAO09980.1| Predicted aminomethyltransferase [Vibrio vulnificus CMCP6] Length = 324 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLETDQVTWGGHCDAKGKLWSVFRLFHYADGYA 85 Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110 +L+ D+S D + +L +F K+ NV + +Q + L+ N E TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVD--PN-TDFLPS 163 + + + + S LL +++ + + T H L + I++ P F + Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPAFAQN 202 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + +NGIS KGCY GQE V+R ++R I ++ ++GT Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGT 249 >gi|261856409|ref|YP_003263692.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2] gi|261836878|gb|ACX96645.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2] Length = 344 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 99/258 (38%), Gaps = 66/258 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-- 63 L ++ + V G+ A FLQA++T ++L L A A+ +G+I LI + Sbjct: 29 LDTRTSLLVSGEEAGEFLQAMLTQEILLLDGTHAARGALCNAKGRISTTVLIHPLRPQGR 88 Query: 64 --------TFILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQP--------- 96 T+ L + L+ L Y LR V+I + P Sbjct: 89 EQGSEQSMTYRLTVPSELAADLLKTLKLYVLRRRVVINGNDDWQNIGVLNPDPAFLADLG 148 Query: 97 --------------INGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIAS 139 +GV+++W EH D R S+ VLL T + + Sbjct: 149 IAASASDPLAQSTLPSGVIVTW--EHMGD-----DARLSLQGPTSVLL--TLAPHLPQRT 199 Query: 140 DIKTYHELRINHGIVDPNTD----FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + IN GI + F+P + +D LN +S KGCY GQEVV+R+ Sbjct: 200 SNSAWQCAEINDGIPTITQETALHFVPQWLN-----LDQLNAVSFKKGCYPGQEVVARLH 254 Query: 196 HRNIIRKRPMIITGTDDL 213 + +R +I G+ L Sbjct: 255 YLGKSNRR--MIKGSTRL 270 >gi|293412257|ref|ZP_06654980.1| tRNA-modifying protein ygfZ [Escherichia coli B354] gi|291469028|gb|EFF11519.1| tRNA-modifying protein ygfZ [Escherichia coli B354] Length = 326 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|62391419|ref|YP_226821.1| aminomethyltransferase, GCVT-like protein [Corynebacterium glutamicum ATCC 13032] gi|21325353|dbj|BAB99974.1| Predicted aminomethyltransferase related to GcvT [Corynebacterium glutamicum ATCC 13032] gi|41326760|emb|CAF21242.1| PUTATIVE AMINOMETHYLTRANSFERASE, GCVT HOMOLOG [Corynebacterium glutamicum ATCC 13032] Length = 367 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 68 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 126 Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117 L+ ++ D+LI K++F+ S V ++ + ++ QE ++ F +D Sbjct: 127 LDTSAAEFDTLIGFLTKMIFW---SEVTVQEADL-AIITLLGQEIALPDAVFARRVDWNG 182 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169 R +A + G ++ + + K Y R+ D TI PH+ Sbjct: 183 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 241 Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220 + L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I Sbjct: 242 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 298 Query: 221 LTDDIEIGTLGVVV 234 +G LG VV Sbjct: 299 KAGARTVGRLGTVV 312 >gi|212710031|ref|ZP_03318159.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM 30120] gi|212687238|gb|EEB46766.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM 30120] Length = 328 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 97/262 (37%), Gaps = 74/262 (28%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-----LLYFLIS 58 + L N I + G A +LQ +TAD+ TL + +A P+GK+ L + L Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADISTLEHAHTL-TAHCDPKGKMWSDLRLFHHL-- 79 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------------- 96 D F RS D+ + +L Y + S V E +P Sbjct: 80 ----DGFSYIERRSVADAQLAELKKYAVFSKVTFEKKPELKLLGIAGQGAREALAAIFAT 135 Query: 97 ----INGVVLSWNQEHTFSNSSFIDERF----------SIADVLLHRTWGHNEKIASDIK 142 N VV+ N T + ERF I D L N SD + Sbjct: 136 LPDHQNQVVVDGNS--TLLHFDLPAERFLIITDEPIAQKITDTL-------NAPQVSD-Q 185 Query: 143 TYHELRINHGIV----DPNTDFLPST----IFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + L I G+ + + LP + PH GIS KGCY GQE+V+R Sbjct: 186 QWLALDIEAGLAVIDQENSAQHLPQAANLQVIPH--------GISFKKGCYTGQEMVARA 237 Query: 195 QHRNIIRKRPMIITGTDDLPPS 216 + R ++ +TGT P+ Sbjct: 238 KFRGANKRAMYWLTGTGSALPT 259 >gi|19553777|ref|NP_601779.1| aminomethyltransferase related to GcvT [Corynebacterium glutamicum ATCC 13032] Length = 373 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 132 Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117 L+ ++ D+LI K++F+ S V ++ + ++ QE ++ F +D Sbjct: 133 LDTSAAEFDTLIGFLTKMIFW---SEVTVQEADL-AIITLLGQEIALPDAVFARRVDWNG 188 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169 R +A + G ++ + + K Y R+ D TI PH+ Sbjct: 189 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 247 Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220 + L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I Sbjct: 248 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 304 Query: 221 LTDDIEIGTLGVVV 234 +G LG VV Sbjct: 305 KAGARTVGRLGTVV 318 >gi|213419535|ref|ZP_03352601.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 228 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 80 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 137 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 138 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 169 >gi|300921231|ref|ZP_07137604.1| folate-binding protein YgfZ [Escherichia coli MS 115-1] gi|300411837|gb|EFJ95147.1| folate-binding protein YgfZ [Escherichia coli MS 115-1] Length = 305 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 12/111 (10%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPI 220 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G + Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAGEDL 244 >gi|330828471|ref|YP_004391423.1| aminomethyltransferase [Aeromonas veronii B565] gi|328803607|gb|AEB48806.1| aminomethyltransferase [Aeromonas veronii B565] Length = 302 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 + L+GIS KGCY+GQE V+R ++R + ++ GT +G P+ + D Sbjct: 192 LQALDGISFNKGCYMGQETVARAKYRGANNRALFLLAGT-----TGEPVASGD 239 >gi|218244955|ref|YP_002370326.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801] gi|257057980|ref|YP_003135868.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802] gi|218165433|gb|ACK64170.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801] gi|256588146|gb|ACU99032.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802] Length = 356 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P+ + I L IS KGCYIGQE ++R+ ++ Sbjct: 220 RVWEQLRIKQGRPFPDKELTEDYIALEAGLWQ---AISFDKGCYIGQETIARLNTYKGVK 276 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R + T + P G+P++ D +IG L Sbjct: 277 QRLWGVKLTQLVDP-GTPVILDGNKIGIL 304 >gi|226226002|ref|YP_002760108.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27] gi|226089193|dbj|BAH37638.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27] Length = 357 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 24/37 (64%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 P +A +D L+ IS TKGCY GQE V+R+ R + + Sbjct: 236 IPQEANLDTLDAISFTKGCYTGQETVARVHFRGHVNR 272 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + ++ G A L ++T DV L ++ +A LTP+GK++ I + +EDTF++ +D Sbjct: 52 WTRIQGPKAADALNGLVTNDVTLLAVNASQYAAALTPKGKMVADMTIVRADEDTFLVGVD 111 >gi|170683930|ref|YP_001745051.1| putative global regulator [Escherichia coli SMS-3-5] gi|226730799|sp|B1LD99|YGFZ_ECOSM RecName: Full=tRNA-modifying protein ygfZ gi|170521648|gb|ACB19826.1| tRNA-modifying protein ygfZ [Escherichia coli SMS-3-5] Length = 326 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|194431674|ref|ZP_03063965.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012] gi|194420030|gb|EDX36108.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012] gi|320182198|gb|EFW57101.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella boydii ATCC 9905] gi|332086823|gb|EGI91959.1| tRNA-modifying protein ygfZ [Shigella boydii 5216-82] Length = 326 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|198242202|ref|YP_002217026.1| putative global regulator [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226730803|sp|B5FUG1|YGFZ_SALDC RecName: Full=tRNA-modifying protein ygfZ gi|197936718|gb|ACH74051.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624794|gb|EGE31139.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 326 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267 >gi|308446327|ref|XP_003087152.1| hypothetical protein CRE_18393 [Caenorhabditis remanei] gi|308260738|gb|EFP04691.1| hypothetical protein CRE_18393 [Caenorhabditis remanei] Length = 240 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 29/249 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + I G AI FLQ +T +V L I + +AI +G+I + KI Sbjct: 1 MSDLAFSSFTLI---GVDAIKFLQGQVTVNVEALAENITQYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + + + + + Y S + +E G V N S D F Sbjct: 58 NPEHLEIVTTQDQAEEFAKHIKKYGAFSKMKLEE---TGRVFP------TLNGSTTD--F 106 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 S + +DI + I G N + P + + GI+ Sbjct: 107 STTE--------------TDISVWQIAAIQTGQAYIN-QAIEHVFQPQELRLHQREGINY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV++R+ + + +I GT P + + + G AL Sbjct: 152 DKGCYLGQEVIARLWFKAKPKAWLHVIQGTGPAPAQAEQLNKGVQVVNSATFENGYIALV 211 Query: 241 IARIDKVDH 249 +AR D ++ Sbjct: 212 VARPDALEE 220 >gi|327395068|dbj|BAK12490.1| protein YgfZ [Pantoea ananatis AJ13355] Length = 337 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + L I GI P D S F P A M L+ IS KGCY GQE+V+R ++R Sbjct: 193 NDSTQWLALDIEAGI--PVIDAATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYR 250 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ ++G S P D +E+ Sbjct: 251 GANKRALYWLSGQ----ASHLPAANDSLEL 276 >gi|15803434|ref|NP_289467.1| putative global regulator [Escherichia coli O157:H7 EDL933] gi|15833024|ref|NP_311797.1| global regulator [Escherichia coli O157:H7 str. Sakai] gi|168747622|ref|ZP_02772644.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113] gi|168753837|ref|ZP_02778844.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401] gi|168760027|ref|ZP_02785034.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501] gi|168766892|ref|ZP_02791899.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486] gi|168775776|ref|ZP_02800783.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196] gi|168778912|ref|ZP_02803919.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076] gi|168785745|ref|ZP_02810752.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869] gi|168800032|ref|ZP_02825039.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508] gi|195936517|ref|ZP_03081899.1| putative global regulator [Escherichia coli O157:H7 str. EC4024] gi|208807633|ref|ZP_03249970.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206] gi|208812486|ref|ZP_03253815.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045] gi|208818514|ref|ZP_03258834.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042] gi|209400648|ref|YP_002272373.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115] gi|217326988|ref|ZP_03443071.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588] gi|254794848|ref|YP_003079685.1| putative global regulator [Escherichia coli O157:H7 str. TW14359] gi|261226211|ref|ZP_05940492.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256534|ref|ZP_05949067.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. FRIK966] gi|81765981|sp|Q8XD41|YGFZ_ECO57 RecName: Full=tRNA-modifying protein ygfZ gi|226730793|sp|B5YQ91|YGFZ_ECO5E RecName: Full=tRNA-modifying protein ygfZ gi|12517426|gb|AAG58026.1|AE005520_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13363242|dbj|BAB37193.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187768764|gb|EDU32608.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196] gi|188017872|gb|EDU55994.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113] gi|189003387|gb|EDU72373.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076] gi|189358685|gb|EDU77104.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401] gi|189363755|gb|EDU82174.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486] gi|189369226|gb|EDU87642.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501] gi|189373870|gb|EDU92286.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869] gi|189377696|gb|EDU96112.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508] gi|208727434|gb|EDZ77035.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206] gi|208733763|gb|EDZ82450.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045] gi|208738637|gb|EDZ86319.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042] gi|209162048|gb|ACI39481.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115] gi|209760538|gb|ACI78581.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760540|gb|ACI78582.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760542|gb|ACI78583.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760546|gb|ACI78585.1| hypothetical protein ECs3770 [Escherichia coli] gi|217319355|gb|EEC27780.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588] gi|254594248|gb|ACT73609.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. TW14359] gi|320189243|gb|EFW63902.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. EC1212] gi|320640542|gb|EFX10081.1| putative global regulator [Escherichia coli O157:H7 str. G5101] gi|320645789|gb|EFX14774.1| putative global regulator [Escherichia coli O157:H- str. 493-89] gi|320651089|gb|EFX19529.1| putative global regulator [Escherichia coli O157:H- str. H 2687] gi|320667179|gb|EFX34142.1| putative global regulator [Escherichia coli O157:H7 str. LSU-61] gi|326339017|gb|EGD62832.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. 1044] gi|326343101|gb|EGD66869.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. 1125] Length = 326 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|322831502|ref|YP_004211529.1| folate-binding protein YgfZ [Rahnella sp. Y9602] gi|321166703|gb|ADW72402.1| folate-binding protein YgfZ [Rahnella sp. Y9602] Length = 330 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D + F P + L+GIS TKGCY GQE+V+R ++R Sbjct: 185 NDSQQWLALDIEAGF--PVIDTANAVQFIPQATNIHALDGISFTKGCYAGQEMVARAKYR 242 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + G S P DD+E+ Sbjct: 243 GANKRALYWLAGK----ASKVPAPADDLEL 268 >gi|291284217|ref|YP_003501035.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615] gi|209760544|gb|ACI78584.1| hypothetical protein ECs3770 [Escherichia coli] gi|290764090|gb|ADD58051.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615] gi|320656585|gb|EFX24481.1| putative global regulator [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662104|gb|EFX29505.1| putative global regulator [Escherichia coli O55:H7 str. USDA 5905] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|16766349|ref|NP_461964.1| global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994112|ref|ZP_02575204.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168261789|ref|ZP_02683762.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197263849|ref|ZP_03163923.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|81521741|sp|Q8ZM80|YGFZ_SALTY RecName: Full=tRNA-modifying protein ygfZ gi|16421599|gb|AAL21923.1| putative aminomethyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197242104|gb|EDY24724.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328009|gb|EDZ14773.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205349199|gb|EDZ35830.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248180|emb|CBG26016.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995203|gb|ACY90088.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159604|emb|CBW19123.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914070|dbj|BAJ38044.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225722|gb|EFX50776.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131404|gb|ADX18834.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989915|gb|AEF08898.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++ G S P +D+E+ Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267 >gi|110643047|ref|YP_670777.1| putative global regulator [Escherichia coli 536] gi|191173236|ref|ZP_03034767.1| tRNA-modifying protein ygfZ [Escherichia coli F11] gi|118577993|sp|Q0TDV3|YGFZ_ECOL5 RecName: Full=tRNA-modifying protein ygfZ gi|110344639|gb|ABG70876.1| hypothetical protein ECP_2892 [Escherichia coli 536] gi|190906487|gb|EDV66095.1| tRNA-modifying protein ygfZ [Escherichia coli F11] gi|281179903|dbj|BAI56233.1| conserved hypothetical protein [Escherichia coli SE15] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|331684524|ref|ZP_08385116.1| tRNA-modifying protein YgfZ [Escherichia coli H299] gi|331078139|gb|EGI49345.1| tRNA-modifying protein YgfZ [Escherichia coli H299] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|331654396|ref|ZP_08355396.1| tRNA-modifying protein YgfZ [Escherichia coli M718] gi|331047778|gb|EGI19855.1| tRNA-modifying protein YgfZ [Escherichia coli M718] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|330817243|ref|YP_004360948.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3] gi|327369636|gb|AEA60992.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3] Length = 346 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 39/235 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I V G A FL + +T D+ L + + T +G++L FL + E Sbjct: 40 LSQFGIIDVAGDDAATFLHSQLTNDIEHLDAAGVKLAGYCTAKGRLLASFLAWRSESGVR 99 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSN--SSFIDE---- 118 +L + + + ++ +L + LR+ + + + V ++ S + D Sbjct: 100 LL-VSKDIQPAVQKRLSMFVLRAKAKLSDAAGLVAVGIAGEAREALSGLFEALPDGVHTK 158 Query: 119 ---------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINHG-I 153 R AD W G +++ + + E+R I Sbjct: 159 LDGPAGTLIRLPDADGRARYLWIASREQFEAGAAVLDGKLARVSPAVWDWLEIRAAEPRI 218 Query: 154 VDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 P + F+P + D++ ++ KGCY GQE+V+R Q+R I++R ++ Sbjct: 219 TQPVVEQFVPQMLN-----YDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRAALV 268 >gi|293416151|ref|ZP_06658791.1| global regulator [Escherichia coli B185] gi|284922846|emb|CBG35935.1| tRNA-modifying protein [Escherichia coli 042] gi|291432340|gb|EFF05322.1| global regulator [Escherichia coli B185] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|157377080|ref|YP_001475680.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sediminis HAW-EB3] gi|157319454|gb|ABV38552.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sediminis HAW-EB3] Length = 321 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 37/232 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + + G+ F+ +T D+ +L A P+GK+ F IE+ F Sbjct: 24 LTHLGLMSITGEQGRSFIHGQVTTDISSLEKDQWCWGAHCDPKGKMWASFRTFAIEDTLF 83 Query: 66 I------LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + LE+D + L +F K + I GV QE + N+ F D Sbjct: 84 MMMPSDTLEVDLPQ---LAKYAVFSKAELTNVSSDWLILGVAGEQAQE--WVNNYFGDID 138 Query: 120 FSIADV----LLHRTWGHN-----EKIAS------------DIKTYHELRINHGIVDPNT 158 ++ ++ LL G EK S + K + L I G PN Sbjct: 139 KAVTEIPGGALLKD--GSRFIIVIEKTPSQALLTSINAPIYECKVWQALEIQSGY--PNL 194 Query: 159 DFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 F P + + GIS KGCY+GQE V+R+++R ++ I++G Sbjct: 195 AAAHQGHFVPQMCNLQAIGGISFEKGCYMGQETVARMKYRGGNKRALYILSG 246 >gi|292654574|ref|YP_003534471.1| folate-binding protein YgfZ [Haloferax volcanii DS2] gi|291372801|gb|ADE05028.1| folate-binding protein YgfZ [Haloferax volcanii DS2] Length = 365 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 N + KGC++GQE+VS+I++R +R ++ D LP SG+ + D +GT+ V Sbjct: 250 NALDFDKGCFVGQELVSKIENRGRPSRR-LVGFRADALPDSGAEVSADGESVGTVTRAVE 308 Query: 236 KKAL-AIARIDKVDHAIK-KGMALTVHGVRVKAS 267 L A VD+ + + + V G RV+A+ Sbjct: 309 SPMLDAPIGFALVDYGLDTDALKVAVDGDRVEAT 342 >gi|220918129|ref|YP_002493433.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1] gi|219955983|gb|ACL66367.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1] Length = 304 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D+ LRI G+ D + ++ P +A + IS TKGCYIGQEVV R R Sbjct: 170 DLAELESLRILAGVARFGAD-MDASRLPMEAGLTR-AAISFTKGCYIGQEVVLRATARGH 227 Query: 200 IRKRPMIITGTDDLPPS---GSPILTDDIEIGTL 230 +++ + + +LPP G+P++ E+G + Sbjct: 228 LQRGLVQL----ELPPGARPGTPLVAGGQEVGAV 257 >gi|327484963|gb|AEA79370.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Vibrio cholerae LMA3894-4] Length = 323 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|308188001|ref|YP_003932132.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1] gi|308058511|gb|ADO10683.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1] Length = 328 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 139 SDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +D + + L I GI +DP T P + L+ IS KGCY GQE+V+R ++ Sbjct: 184 NDSQQWLALDIEAGIPVIDPATSV---QFIPQATNLQALDAISFKKGCYAGQEMVARAKY 240 Query: 197 RNIIRKRPMIITG-TDDLPPSGSPI 220 R ++ + G LP + +P+ Sbjct: 241 RGANKRALYWLVGQASHLPEANAPL 265 >gi|225024513|ref|ZP_03713705.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC 23834] gi|224942664|gb|EEG23873.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC 23834] Length = 285 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 25/233 (10%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A FL + ++ +L L A + +P+G++L L+ + D F+L + Sbjct: 14 EVSGADAAEFLHSQLSNHILDLQPGEACFATYNSPRGRVLANMLVLR-RADRFLLVMAAD 72 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---RFSIAD----V 125 ++ I +L + LRS + +W + +D +F+ + + Sbjct: 73 LLEATIKRLRMFVLRSKTVFHTDS------AWQVYGQSGADTGVDAAALKFAAEEGDNGL 126 Query: 126 LLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM---DLL 175 ++ G N + S D E I+ T+ A M LL Sbjct: 127 IMLVLAGGNRMVLSPAPLPDADYPAAAEAWQAAEILQGRPWISQPTMESSVAQMLNQHLL 186 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 G+ KGCY GQE+++R Q+R +R R M + + GS + D E+G Sbjct: 187 GGVHFKKGCYPGQEIIARAQYRGQVR-RGMAVCRSAMPVAVGSKVEADGEEVG 238 >gi|121729911|ref|ZP_01682336.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147675445|ref|YP_001217973.1| hypothetical protein VC0395_A2049 [Vibrio cholerae O395] gi|262167302|ref|ZP_06035012.1| glycine cleavage T-protein [Vibrio cholerae RC27] gi|172047576|sp|A5F5F3|YGFZ_VIBC3 RecName: Full=tRNA-modifying protein ygfZ gi|121628354|gb|EAX60858.1| conserved hypothetical protein [Vibrio cholerae V52] gi|146317328|gb|ABQ21867.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227014364|gb|ACP10574.1| conserved hypothetical protein [Vibrio cholerae O395] gi|262024277|gb|EEY42968.1| glycine cleavage T-protein [Vibrio cholerae RC27] Length = 323 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|262190699|ref|ZP_06048930.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93] gi|262033411|gb|EEY51918.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93] Length = 323 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|229507469|ref|ZP_04396974.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae BX 330286] gi|229512336|ref|ZP_04401815.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae B33] gi|229519472|ref|ZP_04408915.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae RC9] gi|229606974|ref|YP_002877622.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae MJ-1236] gi|229344161|gb|EEO09136.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae RC9] gi|229352301|gb|EEO17242.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae B33] gi|229354974|gb|EEO19895.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae BX 330286] gi|229369629|gb|ACQ60052.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae MJ-1236] Length = 339 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269 >gi|229524458|ref|ZP_04413863.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae bv. albensis VL426] gi|229527079|ref|ZP_04416474.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae 12129(1)] gi|229335476|gb|EEO00958.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae 12129(1)] gi|229338039|gb|EEO03056.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae bv. albensis VL426] Length = 339 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269 >gi|218706404|ref|YP_002413923.1| putative global regulator [Escherichia coli UMN026] gi|293406397|ref|ZP_06650323.1| global regulator [Escherichia coli FVEC1412] gi|298382133|ref|ZP_06991730.1| ygfZ [Escherichia coli FVEC1302] gi|300896205|ref|ZP_07114754.1| folate-binding protein YgfZ [Escherichia coli MS 198-1] gi|226730797|sp|B7N7E2|YGFZ_ECOLU RecName: Full=tRNA-modifying protein ygfZ gi|218433501|emb|CAR14404.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli UMN026] gi|291426403|gb|EFE99435.1| global regulator [Escherichia coli FVEC1412] gi|298277273|gb|EFI18789.1| ygfZ [Escherichia coli FVEC1302] gi|300359939|gb|EFJ75809.1| folate-binding protein YgfZ [Escherichia coli MS 198-1] Length = 326 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|323491208|ref|ZP_08096394.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG 20546] gi|323314576|gb|EGA67654.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG 20546] Length = 322 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG--TDDLPPSGS 218 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G D+P + Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRALFIVKGEAQQDIPANAE 257 >gi|229514097|ref|ZP_04403559.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TMA 21] gi|229349278|gb|EEO14235.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TMA 21] Length = 339 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269 >gi|153214509|ref|ZP_01949418.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153826896|ref|ZP_01979563.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|254291672|ref|ZP_04962460.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|124115311|gb|EAY34131.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|149739259|gb|EDM53521.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422444|gb|EDN14403.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 323 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|170018856|ref|YP_001723810.1| putative global regulator [Escherichia coli ATCC 8739] gi|189041183|sp|B1ITA4|YGFZ_ECOLC RecName: Full=tRNA-modifying protein ygfZ gi|169753784|gb|ACA76483.1| conserved hypothetical protein [Escherichia coli ATCC 8739] Length = 326 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267 >gi|297581095|ref|ZP_06943020.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534921|gb|EFH73757.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 323 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|329119401|ref|ZP_08248087.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC BAA-1200] gi|327464546|gb|EGF10845.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC BAA-1200] Length = 287 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 38/245 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + I+ G FL ++ + L A + TP+G+++ +++ + +L + Sbjct: 10 AVIRATGDDRASFLHGQLSNHIEALAEGEACYATYNTPKGRVIANMIVANTGGE-LLLVL 68 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-----SWNQEHTFSNSSFIDERFSIAD 124 ++++ +L + LR+ V EI +G + Q SF F ++D Sbjct: 69 ASDLAEAVVKRLRMFVLRAKVSFEILENHGAAGRLPDGTVPQPAAEPQLSF---PFHLSD 125 Query: 125 VLLHRTWGH--------------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 L+ H ++ A + HE+R + + T Sbjct: 126 GLIEIPLPHGGMFLTGETAVLPAHDAAAENAWKLHEIRSGYPWICAATK--------ESC 177 Query: 171 LMDLLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 + +LN G+ KGCY GQE+++R Q+R +++ ++ G +G+ +L D Sbjct: 178 VAQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLFGGS--VEAGAAVLQDLT 235 Query: 226 EIGTL 230 E GT+ Sbjct: 236 EAGTV 240 >gi|15642468|ref|NP_232101.1| hypothetical protein VC2472 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590986|ref|ZP_01678305.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|227082593|ref|YP_002811144.1| hypothetical protein VCM66_2395 [Vibrio cholerae M66-2] gi|254849597|ref|ZP_05238947.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10] gi|255746858|ref|ZP_05420803.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera CIRS 101] gi|262162023|ref|ZP_06031039.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1] gi|298500172|ref|ZP_07009977.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|81544421|sp|Q9KPA1|YGFZ_VIBCH RecName: Full=tRNA-modifying protein ygfZ gi|254814152|sp|C3LR15|YGFZ_VIBCM RecName: Full=tRNA-modifying protein ygfZ gi|9657051|gb|AAF95614.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547163|gb|EAX57292.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|227010481|gb|ACP06693.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|254845302|gb|EET23716.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10] gi|255735260|gb|EET90660.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera CIRS 101] gi|262028272|gb|EEY46929.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1] gi|297540865|gb|EFH76919.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 323 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|183179722|ref|ZP_02957933.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|183013133|gb|EDT88433.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 323 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|330898494|gb|EGH29913.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. japonica str. M301072PT] Length = 315 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +++P G+ + + Sbjct: 233 LYRLTLSNEEIPQPGTALFS 252 >gi|302188267|ref|ZP_07264940.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae 642] Length = 293 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +++P G+ + + Sbjct: 211 LYRLTLSGEEIPQPGTAVFS 230 >gi|325128313|gb|EGC51197.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568] Length = 287 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124 ++ + +L + LR+ + EI G L + E + N +F ++ S I Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 129 Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + L T + A + HE+R + + T A+ + Sbjct: 130 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 181 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 239 >gi|330973020|gb|EGH73086.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. aceris str. M302273PT] Length = 293 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 10/108 (9%) Query: 119 RFSIADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNT--DFLPSTIFPHDALMDLL 175 R + AD + R H NE +D ++R+ G V +T +F+P I + + Sbjct: 129 RSAEADSIKSRLASHLNEAPLNDW-LLGQIRVGIGQVFGSTREEFIPQMIN-----LQAV 182 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT 222 G+S KGCY GQE+V+R+Q+ +++R +T +++P G+ + + Sbjct: 183 GGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFS 230 >gi|271962471|ref|YP_003336667.1| LigA [Streptosporangium roseum DSM 43021] gi|270505646|gb|ACZ83924.1| LigA [Streptosporangium roseum DSM 43021] Length = 328 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLG 231 + L+KGCY GQE V+R+ + +R + + D LP G+P++ D++E+G +G Sbjct: 214 LHLSKGCYKGQETVARVHNLGHPPRRLVFLHLDGSVDTLPKHGAPVVHDEVEVGFVG 270 >gi|229521298|ref|ZP_04410718.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TM 11079-80] gi|229341830|gb|EEO06832.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TM 11079-80] Length = 339 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 220 PQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269 >gi|219848165|ref|YP_002462598.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485] gi|219542424|gb|ACL24162.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485] Length = 322 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 15/97 (15%) Query: 140 DIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + +T +RI HG + D++P DL +S KGCY+GQE+++R++ Sbjct: 190 NAETAEVVRIEHGYPRFGHEITLDYIPLE-------ADLWRAVSFQKGCYVGQEIIARME 242 Query: 196 HRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230 R I K R + +T + P +P+ D E+G L Sbjct: 243 SRGRIAKQLRGLRLTALPTIVP--TPLTVDGKEVGVL 277 >gi|21242812|ref|NP_642394.1| hypothetical protein XAC2074 [Xanthomonas axonopodis pv. citri str. 306] gi|21108298|gb|AAM36930.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 290 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 26/278 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 15 LHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHL 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FSI 122 ++ + + +L + R + I I + EH + + I + + Sbjct: 75 LMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELDL 134 Query: 123 ADVLLHRTW--GHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHDA 170 L RT + +A+ I+ T +L + + + P + Sbjct: 135 GSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARLVEGQREQWTPQQL----- 189 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +D L S+ KGCY GQE+V+R H KR + + TD +G + D IGT+ Sbjct: 190 ALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDAAVDAGDAVALDGSAIGTV 248 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266 V G ALA+ ++ + G AL HG R +A Sbjct: 249 VSVAGNLALAVLPLELT---LDAGTALQAGRHGARPRA 283 >gi|254672451|emb|CBA05856.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 304 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS----- 121 ++ + +L + LR+ + EI G L + E + N +F ++ S Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 146 Query: 122 -------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 I + T + A + HE+R + + T A+ + Sbjct: 147 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 256 >gi|153831095|ref|ZP_01983762.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873416|gb|EDL71551.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 323 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253 >gi|325136232|gb|EGC58840.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579] gi|325202024|gb|ADY97478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240149] gi|325208223|gb|ADZ03675.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NZ-05/33] Length = 287 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 22/234 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124 ++ + +L + LR+ + EI G L + E + N +F ++ S I Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 129 Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + L T + A + HE+R + + T T + Sbjct: 130 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239 >gi|225447955|ref|XP_002269147.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|298204501|emb|CBI23776.3| unnamed protein product [Vitis vinifera] Length = 430 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 L N ISL KGCY GQE +SR+ + +++R I+ + P GSPI D ++G L Sbjct: 318 LWNSISLNKGCYKGQETISRLITYDGVKQRLWGISLSGPAEP-GSPITADGKKVGKL 373 >gi|298488667|ref|ZP_07006696.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156740|gb|EFH97831.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 313 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 176 QIRAGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 230 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T ++++P G+ + + Sbjct: 231 LYRLTLSSEEIPEPGTALFS 250 >gi|268591706|ref|ZP_06125927.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131] gi|291312665|gb|EFE53118.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131] Length = 327 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 38/243 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEE 62 + L N I + G A +LQ +TAD+ TL A +A P+GK+ L ++ Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADIATLKQSHAL-TAHCDPKGKMWSDLRLFHHLDG 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFS-NSSFIDE 118 +++L S DS + +L Y + S V E +P + GV +E + ++ D Sbjct: 82 YSYLLRT--SVADSQLAELKKYAVFSKVTFEKKPELKLVGVAGKGAREALATLFTALPDA 139 Query: 119 RFSI----ADVLLHRTWGH-------NEKIASDI-KTYHELRINH------------GIV 154 + + A +LH NE+ A + +T +++N I+ Sbjct: 140 QNQVVTDDASTILHFALPTERFLVITNEETAQKMAQTLGAIQVNDEQWLALDIEAGFAII 199 Query: 155 DP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D + LP L L +GIS KGCY GQE+V+R + R ++ + GT Sbjct: 200 DQQNSAQHLPQAT----NLQALPDGISFKKGCYTGQEMVARAKFRGANKRAMYTLKGTGT 255 Query: 213 LPP 215 P Sbjct: 256 TIP 258 >gi|297193546|ref|ZP_06910944.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC 25486] gi|197718178|gb|EDY62086.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC 25486] Length = 323 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 22/231 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS++ + V G+ + +L ++T V L A + IL+ G I LY + + Sbjct: 44 VDLSHRGVVTVSGEERLSWLHLLLTQHVTDLSPGQATEALILSAHGHIEHALYLVD---D 100 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +T ++ R++LI L FYK + V V L + Sbjct: 101 GETVWAHVEPGTREALIGYLESMKFFYK--AEVADRTDDFAVVHLPAGSIAEVPEGVVVR 158 Query: 118 ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPHDALM 172 E D+ L R ++G A I Y LR+ P F PH+ L Sbjct: 159 ETAHGRDLFLPRADLESFGAAAGPAVGILAYEALRVESH--RPRLGFETDHRTIPHE-LG 215 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI 220 + + + L KGCY GQE V+R+ + +R + + G++ LPP G+P+ Sbjct: 216 WIGSAVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPPGTPV 266 >gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119870652|ref|YP_940604.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] Length = 356 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%) Query: 176 NGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ + R ++R + + GT D P +G P+L +G + Sbjct: 235 SAVHLDKGCYRGQETVARVHNLGKPPRMLVR---LHLDGTTDRPSTGDPVLAGGRTVGRV 291 Query: 231 GVVV-----GKKALAIAR 243 G VV G ALA+ + Sbjct: 292 GTVVEHIDDGPVALALVK 309 >gi|71735285|ref|YP_276095.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555838|gb|AAZ35049.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. phaseolicola 1448A] Length = 315 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILT 222 + + + Sbjct: 248 TALFS 252 >gi|257486552|ref|ZP_05640593.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330989043|gb|EGH87146.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010035|gb|EGH90091.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 315 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILT 222 + + + Sbjct: 248 TALFS 252 >gi|320327157|gb|EFW83171.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. race 4] gi|330879268|gb|EGH13417.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. race 4] Length = 315 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILT 222 + + + Sbjct: 248 TALFS 252 >gi|313105580|ref|ZP_07791846.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa 39016] gi|310878348|gb|EFQ36942.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa 39016] Length = 314 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + G D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALGGDEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] gi|126237284|gb|ABO00685.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] Length = 356 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%) Query: 176 NGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ + R ++R + + GT D P +G P+L +G + Sbjct: 235 SAVHLDKGCYRGQETVARVHNLGKPPRMLVR---LHLDGTTDRPSTGDPVLAGGRTVGRV 291 Query: 231 GVVV-----GKKALAIAR 243 G VV G ALA+ + Sbjct: 292 GTVVEHIDDGPVALALVK 309 >gi|289628133|ref|ZP_06461087.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649901|ref|ZP_06481244.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. 2250] gi|330871252|gb|EGH05961.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 315 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILT 222 + + + Sbjct: 248 TALFS 252 >gi|255325915|ref|ZP_05367007.1| glycine cleavage T-protein, C- barrel [Corynebacterium tuberculostearicum SK141] gi|255297127|gb|EET76452.1| glycine cleavage T-protein, C- barrel [Corynebacterium tuberculostearicum SK141] Length = 354 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 103/254 (40%), Gaps = 32/254 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I+V GK A FL +++ + P G+ L QG IL + I + + D F+ Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRTD-DAFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEHTFSNSS 114 +++ ++ DSL L S V +E I + L ++++ +S Sbjct: 110 IDVPAAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWSGIK 169 Query: 115 FID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA- 170 +D R S+ + H T +R + + D + PH+ Sbjct: 170 RVDLGVPRESLVEATKHLEESGARLAGLMAFTAERVRAREPELAADLD---NKSIPHEVP 226 Query: 171 -----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 +D + L KGCY GQE V+R++ N+ R +++ D P + DDI Sbjct: 227 QWISRSVDNPAHVHLNKGCYRGQETVARVE--NLGRSPRLLVQLHLDGSAPQRPNVGDDI 284 Query: 226 -----EIGTLGVVV 234 ++G +G +V Sbjct: 285 TFNGRKVGRIGTIV 298 >gi|320325557|gb|EFW81619.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. B076] Length = 315 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILT 222 + + + Sbjct: 248 TALFS 252 >gi|322370098|ref|ZP_08044660.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253] gi|320550434|gb|EFW92086.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253] Length = 372 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 8/94 (8%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG--TDDLPPSGSPILTDDIEIG 228 ++ L N + KGCY+GQEVVSR+++R +R + G + +P +G+ + D +G Sbjct: 254 VLGLRNALDFEKGCYVGQEVVSRVENRGQPSRR---LAGLLPESVPEAGAAVFAGDEVVG 310 Query: 229 --TLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 T G+ + A + V++ ++ G LTV Sbjct: 311 EVTRGIESPSRGEPAA-MALVNYDVEIGSGLTVR 343 >gi|198283240|ref|YP_002219561.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667779|ref|YP_002425823.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247761|gb|ACH83354.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519992|gb|ACK80578.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 23270] Length = 321 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 56/290 (19%), Positives = 110/290 (37%), Gaps = 53/290 (18%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 I G A FLQ + D+ L + S+ T +G+++ F + + D F L + Sbjct: 16 GLIHASGVDAEKFLQGQFSNDLRALASGHGQWSSYSTAKGRMIANFYVQRDGSD-FWLSL 74 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA------ 123 D++I++L +++ + + I+ +L+ H + IA Sbjct: 75 ADDMADTVIERLRKFRMMAKLEIKRGEPEFTLLA---VHGNGAGELLGRALGIALGKSGN 131 Query: 124 ------DVLLHR-TWGHNEKI-----ASDIKTYHE-------------------LRINHG 152 D ++ R W E AS ++ ++ G Sbjct: 132 SGVVHDDAIITRLPWAEAEAFLIILPASRVEALSAKLGAAGARSGAAEDWRLWAIQAGVG 191 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ T I P + +++L GI+ KGCY GQE+V+R + ++ + + + Sbjct: 192 MISRATT---EKIIPQELNLEVLGGINFKKGCYPGQEIVARSHYLGKLKNQTYRVAASAP 248 Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKG 254 L +G I + ++G+V+ G ALA+ R ++ G Sbjct: 249 L-QAGEEIFCTSMGAQSIGIVINAAQDPLGGFAALAVLRAANAGESLMAG 297 >gi|66047189|ref|YP_237030.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae B728a] gi|63257896|gb|AAY38992.1| Glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae B728a] Length = 315 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T +++P G+ + + Sbjct: 233 LYRLTLSGEEIPQPGTALFS 252 >gi|242240709|ref|YP_002988890.1| folate-binding protein YgfZ [Dickeya dadantii Ech703] gi|242132766|gb|ACS87068.1| folate-binding protein YgfZ [Dickeya dadantii Ech703] Length = 328 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +D + + L I G P D S F P + L IS TKGCY GQE+V+R ++R Sbjct: 185 NDSRQWLALDIAAG--QPIIDSANSAQFIPQATNLQALQAISFTKGCYTGQEMVARAKYR 242 Query: 198 NIIRKRPMIITGT-DDLPPSG 217 ++ ++GT LP +G Sbjct: 243 GANKRALYWLSGTATSLPSAG 263 >gi|312959548|ref|ZP_07774065.1| glycine cleavage T protein [Pseudomonas fluorescens WH6] gi|311286265|gb|EFQ64829.1| glycine cleavage T protein [Pseudomonas fluorescens WH6] Length = 313 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 ++R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 176 QIRAGIGQVMPQTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232 Query: 206 IIT-GTDDLPPSGSPILT 222 + +P G+P+ + Sbjct: 233 RLKLDAAQMPEPGTPLFS 250 >gi|297565303|ref|YP_003684275.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946] gi|296849752|gb|ADH62767.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946] Length = 339 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 142 KTYHELRINHGIVDPNTDF--LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + Y R+ G+ D LP + L +S KGCY+GQE+++R++ R Sbjct: 203 EAYRVWRVEQGVADLEDALGELPQEV-------GLEARVSYKKGCYLGQEIMARLEARGN 255 Query: 200 IRKRPMIITGTDDLPPS 216 R + M + G LPP Sbjct: 256 TRYQLMGLLGQQPLPPE 272 >gi|330889491|gb|EGH22152.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. mori str. 301020] Length = 293 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 171 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 225 Query: 218 SPILT 222 + + + Sbjct: 226 TALFS 230 >gi|327479782|gb|AEA83092.1| aminomethyltransferase [Pseudomonas stutzeri DSM 4166] Length = 315 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 35/227 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ + V G A FLQ +T ++ L + A TP+G++ F I E D + Sbjct: 10 LSHEGVLAVRGPDASKFLQGQLTCNLNYLDAHTSSLGARCTPKGRMQSSFRIVP-EGDGY 68 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHT 109 +L + + L Y + S + + + G+ LS + Sbjct: 69 LLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIADGDGSLVSLGLDLSQAADSI 128 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-HELRINHGIVDP------------ 156 + I R L E++ + + E+ +N ++D Sbjct: 129 VRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWLLDQVRAGIGQVFGST 188 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I + L G+S KGCY GQE+V+R+Q+ +++R Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRR 230 >gi|237729839|ref|ZP_04560320.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2] gi|226908445|gb|EEH94363.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2] Length = 327 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L+ + G E ++ + + L I GI P D S F P Sbjct: 159 ERFLLIVDATTAETLVEKLRGEAE--LNNSQQWLALDIEAGI--PVIDTANSAQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ + G P +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGAAGRVPEAG----EDLEL 267 >gi|149910165|ref|ZP_01898811.1| aminomethyltransferase-like protein [Moritella sp. PE36] gi|149806751|gb|EDM66715.1| aminomethyltransferase-like protein [Moritella sp. PE36] Length = 328 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 28/49 (57%) Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + S P + +GIS TKGCY GQE V+R ++R ++ I++G Sbjct: 205 MSSVQIPQAFNLQAYDGISFTKGCYTGQETVARAKYRGTNKRAMAILSG 253 >gi|299066793|emb|CBJ37987.1| putative aminomethyl transferase [Ralstonia solanacearum CMR15] Length = 346 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 25/37 (67%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 230 PQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRR 266 >gi|238026999|ref|YP_002911230.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia glumae BGR1] gi|237876193|gb|ACR28526.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia glumae BGR1] Length = 376 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E RI +V+ F+P + D++ I+ KGCY GQE+V+R Q+R I++R Sbjct: 212 EPRITQPVVE---QFVPQMVN-----YDVIGAINFRKGCYPGQEIVARSQYRGTIKRR 261 >gi|269960415|ref|ZP_06174788.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834842|gb|EEZ88928.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 322 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247 >gi|17546501|ref|NP_519903.1| hypothetical protein RSc1782 [Ralstonia solanacearum GMI1000] gi|17428799|emb|CAD15484.1| putative glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum GMI1000] Length = 346 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 25/37 (67%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 230 PQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRR 266 >gi|110834505|ref|YP_693364.1| hypothetical protein ABO_1644 [Alcanivorax borkumensis SK2] gi|110647616|emb|CAL17092.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 315 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 48/227 (21%), Positives = 95/227 (41%), Gaps = 30/227 (13%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + D +L Sbjct: 31 AIIRAHGEEAGHYLQGQLSCDLREVDNGGHLTGMHLSLKGRGLVSVRIVRDGNDYLML-C 89 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------HTFSNSSFIDERF 120 + +++I L+ Y+LR+ V ++ V+L + + N + R+ Sbjct: 90 PAGQSEAVIKSLMKYRLRAKVEFQVDN-QAVILGLSGALPGALPQPGQSTRNDQGLWLRY 148 Query: 121 SIADVLL--------HRTWGHN--EKIASDIKTYH--ELRINHGIVDPNTD--FLPSTIF 166 D L W E+ A + + ++ G+V P + FLP + Sbjct: 149 PNTDHALLITHTEQAEAVWAAQAQERTALNGNGWRLADIDAGEGMVYPGAEDLFLPQVLN 208 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D+ G++ KGCY GQEVV+R+ + +++R + T D+ Sbjct: 209 -----YDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRVDYTADM 250 >gi|288550368|ref|ZP_05970159.2| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316] gi|288315642|gb|EFC54580.1| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316] Length = 298 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 40/247 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G + +LQ +TADV L +A P+GK+ + + +D F RS Sbjct: 4 LTGADSEKYLQGQVTADVAQLTEHQHLLAAHCDPKGKMWSNLRLFR-RQDGFAFIERRSL 62 Query: 74 RDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID---------- 117 RD+ + +L Y + S V I + + G ++ F+ D Sbjct: 63 RDAQLAELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFAALPDADKPLVSEGVTS 122 Query: 118 --------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 ERF + A+ + G E ++ + + L I G+ P D S Sbjct: 123 LLWFEHPAERFLLVTDEATAERVTEALRG--EAQFNNSQQWLALNIEAGL--PVIDAANS 178 Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPIL 221 F P + L GIS KGCY GQE+V+R + R ++ + G +P +G I Sbjct: 179 AQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAGRVPQAGEDI- 237 Query: 222 TDDIEIG 228 +++IG Sbjct: 238 --ELKIG 242 >gi|254037943|ref|ZP_04872001.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43] gi|226839567|gb|EEH71588.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43] Length = 326 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 364 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSADRPATGDPVQAGGRAVGRLG 300 Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269 VV G ALA + R D A+ G V V S P Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344 >gi|119485425|ref|ZP_01619753.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp. PCC 8106] gi|119457181|gb|EAW38307.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp. PCC 8106] Length = 349 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%) Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 IA +T+ +LRI G P+++ L P +A L IS KGCYIGQE ++R+ Sbjct: 213 IAMGNRTWEQLRIEQGRPVPDSE-LTDDYNPLEA--GLWKTISFEKGCYIGQETIARLNT 269 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 ++++ + + P G+ I +D ++G L + KA Sbjct: 270 YKGVKQQLWGLK-LEAAVPVGTEIKVEDKKVGKLTSFIETKA 310 >gi|300691470|ref|YP_003752465.1| aminomethyl transferase [Ralstonia solanacearum PSI07] gi|299078530|emb|CBJ51185.1| putative aminomethyl transferase [Ralstonia solanacearum PSI07] Length = 346 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 25/37 (67%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 230 PQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRR 266 >gi|320333227|ref|YP_004169938.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211] gi|319754516|gb|ADV66273.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211] Length = 287 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D D + P + +D IS KGCY+GQE+++R++ R R R + Sbjct: 169 RLEAGVPDVPADEW-RGVLPQEVGLDF--AISYRKGCYVGQEIMARLEARGNTRYRLARL 225 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250 TG + LP +G G G LA R + D A Sbjct: 226 TG-EGLPAHADVTDAAGKVVGRTGASTGAVTLARLRKEFADGA 267 >gi|253988688|ref|YP_003040044.1| global regulator [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637988|emb|CAR66616.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780138|emb|CAQ83299.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 331 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Query: 153 IVDP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 ++DP +T F+P L L GI KGCY GQE+V+R ++R ++ + G+ Sbjct: 199 VIDPANSTQFIPQAT----NLQALEGGICFKKGCYTGQEMVARAKYRGANKRAMYWLAGS 254 Query: 211 DDLPPSGSPILTDDIE 226 + P+ DD+E Sbjct: 255 ----AAKIPVAGDDLE 266 >gi|320155310|ref|YP_004187689.1| Fe/S cluster synthesis/repair in oxidative stress protein [Vibrio vulnificus MO6-24/O] gi|319930622|gb|ADV85486.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Vibrio vulnificus MO6-24/O] Length = 324 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYADGYA 85 Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110 +L+ D+S D + +L +F K+ NV + +Q + L+ N E TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVD--PN-TDFLPS 163 + + + + S LL +++ + + T H L + I++ P F + Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPAFAQN 202 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + +NGIS KGCY GQE V+R ++R I ++ ++G Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 249 >gi|324017296|gb|EGB86515.1| folate-binding protein YgfZ [Escherichia coli MS 117-3] Length = 305 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246 >gi|315656014|ref|ZP_07908912.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333] gi|315490078|gb|EFU79705.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333] Length = 368 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192 N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+ Sbjct: 203 NALMKADLGAWEAVRISLWHPRLGCEGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 259 Query: 193 RIQHRNIIRKRPMII---TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247 ++ +R +R + ++LP GSP+ +D E+G L V + + Sbjct: 260 KLTNRGRPPRRLTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 319 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + L V G R S Sbjct: 320 KRQVDPAEMLLVEGTRAAQS 339 >gi|300815649|ref|ZP_07095873.1| folate-binding protein YgfZ [Escherichia coli MS 107-1] gi|300820703|ref|ZP_07100854.1| folate-binding protein YgfZ [Escherichia coli MS 119-7] gi|300906551|ref|ZP_07124242.1| folate-binding protein YgfZ [Escherichia coli MS 84-1] gi|300925120|ref|ZP_07141034.1| folate-binding protein YgfZ [Escherichia coli MS 182-1] gi|300928165|ref|ZP_07143707.1| folate-binding protein YgfZ [Escherichia coli MS 187-1] gi|300947622|ref|ZP_07161793.1| folate-binding protein YgfZ [Escherichia coli MS 116-1] gi|300954261|ref|ZP_07166724.1| folate-binding protein YgfZ [Escherichia coli MS 175-1] gi|301303057|ref|ZP_07209184.1| folate-binding protein YgfZ [Escherichia coli MS 124-1] gi|301327300|ref|ZP_07220556.1| folate-binding protein YgfZ [Escherichia coli MS 78-1] gi|301643751|ref|ZP_07243789.1| folate-binding protein YgfZ [Escherichia coli MS 146-1] gi|309793971|ref|ZP_07688396.1| folate-binding protein YgfZ [Escherichia coli MS 145-7] gi|281602231|gb|ADA75215.1| tRNA-modifying protein ygfZ [Shigella flexneri 2002017] gi|300318722|gb|EFJ68506.1| folate-binding protein YgfZ [Escherichia coli MS 175-1] gi|300401590|gb|EFJ85128.1| folate-binding protein YgfZ [Escherichia coli MS 84-1] gi|300418722|gb|EFK02033.1| folate-binding protein YgfZ [Escherichia coli MS 182-1] gi|300452797|gb|EFK16417.1| folate-binding protein YgfZ [Escherichia coli MS 116-1] gi|300463805|gb|EFK27298.1| folate-binding protein YgfZ [Escherichia coli MS 187-1] gi|300526967|gb|EFK48036.1| folate-binding protein YgfZ [Escherichia coli MS 119-7] gi|300531578|gb|EFK52640.1| folate-binding protein YgfZ [Escherichia coli MS 107-1] gi|300841721|gb|EFK69481.1| folate-binding protein YgfZ [Escherichia coli MS 124-1] gi|300846163|gb|EFK73923.1| folate-binding protein YgfZ [Escherichia coli MS 78-1] gi|301077850|gb|EFK92656.1| folate-binding protein YgfZ [Escherichia coli MS 146-1] gi|308122378|gb|EFO59640.1| folate-binding protein YgfZ [Escherichia coli MS 145-7] gi|315256782|gb|EFU36750.1| folate-binding protein YgfZ [Escherichia coli MS 85-1] Length = 305 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246 >gi|118577999|sp|Q7MHM7|YGFZ_VIBVY RecName: Full=tRNA-modifying protein ygfZ Length = 324 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 85 Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110 +L+ D+S D + +L +F K+ NV + +Q + L+ N E TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 144 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNT---DFLPS 163 + + + + S LL +++ + + T H L + I++ + F + Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPAFAQN 202 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + +NGIS KGCY GQE V+R ++R I ++ ++G Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 249 >gi|70728823|ref|YP_258572.1| aminomethyl transferase [Pseudomonas fluorescens Pf-5] gi|68343122|gb|AAY90728.1| aminomethyl transferase, putative [Pseudomonas fluorescens Pf-5] Length = 313 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-- 203 ++R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 176 QVRAGLGQVMPETREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232 Query: 204 PMIITGTDDLPPSGSPILT 222 + + G D LP G+ + Sbjct: 233 RLALPG-DALPVPGTALFA 250 >gi|237798703|ref|ZP_04587164.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806136|ref|ZP_04592840.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021556|gb|EGI01613.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027249|gb|EGI07304.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 293 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 6/65 (9%) Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 +F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T D +P G Sbjct: 171 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQGDQVPEPG 225 Query: 218 SPILT 222 + + + Sbjct: 226 TAVFS 230 >gi|262042539|ref|ZP_06015696.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010968|ref|ZP_08306933.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3] gi|259040099|gb|EEW41213.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534345|gb|EGF60955.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3] Length = 306 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + L I G+ P D S F P + L GIS KGCY GQE+V+R + R Sbjct: 166 QQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGAN 223 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ ++GT S P +D+E+ Sbjct: 224 KRALWTLSGT----ASRVPEAGEDLEL 246 >gi|296107164|ref|YP_003618864.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy] gi|295649065|gb|ADG24912.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy] Length = 329 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 196 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 250 Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230 ++ + +D+ SG + +D E+G L Sbjct: 251 TLKHELKKFVIQSDNQLYSGQKLFKSDEDTEVGEL 285 >gi|37681026|ref|NP_935635.1| aminomethyltransferase [Vibrio vulnificus YJ016] gi|37199776|dbj|BAC95606.1| predicted aminomethyltransferase [Vibrio vulnificus YJ016] Length = 343 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 45 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 104 Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110 +L+ D+S D + +L +F K+ NV + +Q + L+ N E TF Sbjct: 105 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 163 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNT---DFLPS 163 + + + + S LL +++ + + T H L + I++ + F + Sbjct: 164 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPAFAQN 221 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + +NGIS KGCY GQE V+R ++R I ++ ++G Sbjct: 222 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 268 >gi|312964841|ref|ZP_07779081.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75] gi|312290397|gb|EFR18277.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75] Length = 326 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%) Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174 IDE + A++L + G E ++ + + L I G P D S F P + Sbjct: 165 IDE--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQATNLQA 218 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 219 LGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|323154590|gb|EFZ40789.1| tRNA-modifying protein ygfZ [Escherichia coli EPECa14] Length = 220 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 53 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 108 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 109 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 161 >gi|215488198|ref|YP_002330629.1| putative global regulator [Escherichia coli O127:H6 str. E2348/69] gi|254814148|sp|B7UHU7|YGFZ_ECO27 RecName: Full=tRNA-modifying protein ygfZ gi|215266270|emb|CAS10699.1| predicted folate-dependent regulatory protein [Escherichia coli O127:H6 str. E2348/69] Length = 326 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%) Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174 IDE + A++L + G E ++ + + L I G P D S F P + Sbjct: 165 IDE--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQATNLQA 218 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 219 LGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|218701607|ref|YP_002409236.1| putative global regulator [Escherichia coli IAI39] gi|226730794|sp|B7NW39|YGFZ_ECO7I RecName: Full=tRNA-modifying protein ygfZ gi|218371593|emb|CAR19432.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli IAI39] Length = 326 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|116048674|ref|YP_792526.1| hypothetical protein PA14_54480 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583895|gb|ABJ09910.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 314 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 8/103 (7%) Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPSTIFPHDALMDLLNGISL 180 A+ +L R H+ + D ++R G V T F+P I + + G+S Sbjct: 153 AEAVLARLREHSREAPLDDWLLGQVRAGIGQVFGATRELFIPQMIN-----LQAVGGVSF 207 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPILT 222 KGCY GQE+V+R+Q+ +++R + D++P G+ + + Sbjct: 208 KKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGTGLFS 250 >gi|156082666|ref|XP_001608817.1| hypothetical protein [Babesia bovis T2Bo] gi|154796067|gb|EDO05249.1| conserved hypothetical protein [Babesia bovis] Length = 324 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEED 63 L N+ + + GK ++ FLQ + + DV +L I + + L G+IL L+S+ + + Sbjct: 8 LRNRGLLTLSGKDSLSFLQGLTSTDVSSLTKNIKKIFPTLFLGSDGRILSDGLLSR-DGE 66 Query: 64 TFILE------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 +LE I R K + +D + N I + ++ ++ + Q T S Sbjct: 67 RILLETASGNIPTLSNLIARRKVSAKVDYSIEKNYSVNAYIPKELLH-LIRNGPQGDTVS 125 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRIN-HGIVDPNTDFLPSTI--- 165 N+S + +L R + + DI + L + +G P LP + Sbjct: 126 NTSLQPPDYECDMPILARKYIAYDATNQYRDITEPYRLYLTLNGFALP----LPKEVKTL 181 Query: 166 --FPHDALMDLLNGISLTKGCYIGQEVVSRI 194 P D + + ++ KGCY+GQE+++R+ Sbjct: 182 KLLPQDMFLHRMGLVAQNKGCYVGQEIMNRV 212 >gi|329894324|ref|ZP_08270194.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [gamma proteobacterium IMCC3088] gi|328923120|gb|EGG30443.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [gamma proteobacterium IMCC3088] Length = 272 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 21/200 (10%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S +++ G A LQ +T DV +L + + +G++ L + K + L + Sbjct: 11 SALELIGPDAAKTLQGQLTNDVESLRNRKGLDGLLCNLKGRVELVVKVYKHSPEQLTLVV 70 Query: 70 DRSKRDSLIDKLL----FYKLRSNVI------IEIQPINGVVLSWNQEHTFSNSSFIDER 119 + D+L +L F K R N + + I P + + F + I + Sbjct: 71 PTANIDALKRRLAPYVAFSKSRLNELNLETYSLVIAPPDSDPIEVPAGLWFGDLGLISPQ 130 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGI 178 A L R + AS I +H RI+ G++ + S ++ AL +D L + Sbjct: 131 ---AINQLTRPY-----TASSIDEFHHWRIHSGMIQLTPE--QSGLYTPQALSLDRLGYV 180 Query: 179 SLTKGCYIGQEVVSRIQHRN 198 S KGCY+GQE+++R+ ++ Sbjct: 181 SFKKGCYMGQEIIARLHYKG 200 >gi|153835742|ref|ZP_01988409.1| protein YgfZ [Vibrio harveyi HY01] gi|148867601|gb|EDL66905.1| protein YgfZ [Vibrio harveyi HY01] Length = 322 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247 >gi|156975802|ref|YP_001446709.1| aminomethyltransferase [Vibrio harveyi ATCC BAA-1116] gi|166979588|sp|A7MTS4|YGFZ_VIBHB RecName: Full=tRNA-modifying protein ygfZ gi|156527396|gb|ABU72482.1| hypothetical protein VIBHAR_03546 [Vibrio harveyi ATCC BAA-1116] Length = 322 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246 >gi|93005000|ref|YP_579437.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter cryohalolentis K5] gi|92392678|gb|ABE73953.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter cryohalolentis K5] Length = 255 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 46/261 (17%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLIS 58 +++ L S + + G+ A FLQ +T DV L L Y+ A AI +G+I I Sbjct: 5 INTAALPQFSQLSIQGEDAEKFLQGQLTCDVTKLGLSYQAA---AIGNLKGRIEFGIWIK 61 Query: 59 KIEEDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 K E F + I ++ L F K ++ I P Sbjct: 62 KQAEKHFDMVISADCAEAFQGHLKKFGAFSKCDTSAPTPIYPC----------------- 104 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDA 170 IDE + + H T + +I+ + + I G + +F P + H Sbjct: 105 VIDEVPTFSHQDDHNT-------SKNIQAWMQSSIATGNYWIVAATQGEFQPQELRLHQ- 156 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE---- 226 G+ KGCY+GQEV++RI ++ + + GT +P+ + ++ Sbjct: 157 ----RGGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPVAGEKLDKVQV 212 Query: 227 IGTLGVVVGKKALAIARIDKV 247 + + G +AL +AR +++ Sbjct: 213 VNAITTSEGFEALVVARPEQL 233 >gi|170765986|ref|ZP_02900797.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627] gi|170125132|gb|EDS94063.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627] Length = 326 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L+ + G E ++ + + L I G+ P D S F P Sbjct: 159 ERFLLVTDEATANTLVDKLRGEAE--LNNSQQWLALNIEAGL--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEIGT 229 + L GIS KGCY GQE+V+R + R ++ ++ G LP +G + ++++G Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLVGHASRLPEAGEDL---ELKMGE 271 Query: 230 LGVVVGKKALAIARID 245 G A+ R D Sbjct: 272 NWRRTGTVLAAVKRED 287 >gi|315656111|ref|ZP_07909002.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493113|gb|EFU82713.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 368 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192 N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+ Sbjct: 203 NALMKADLGAWEAVRISLWHPRLGCEGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 259 Query: 193 RIQHRNIIRKRPMII---TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247 ++ +R +R + ++LP GSP+ +D E+G L V + + Sbjct: 260 KLTNRGRPPRRLTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 319 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + L V G R S Sbjct: 320 KRQVNPAEILLVEGTRAAQS 339 >gi|285018598|ref|YP_003376309.1| glycine cleavage system t (aminomethyltransferase) protein [Xanthomonas albilineans GPE PC73] gi|283473816|emb|CBA16318.1| putative glycine cleavage system t (aminomethyltransferase) protein [Xanthomonas albilineans] Length = 288 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 11/105 (10%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L+ S+ KGCY GQE+V+R H KR + + + +G+P+L + Sbjct: 186 PQQLGLDRLHAFSVKKGCYPGQEIVART-HFLGKAKRALQLLELEAPVATGAPVLREGEP 244 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IG++ + G ALA+ +++ + G++V+ HW Sbjct: 245 IGSVISIAGTLALAVLPLEETPPS----------GLQVETRAAHW 279 >gi|82545479|ref|YP_409426.1| global regulator [Shigella boydii Sb227] gi|118577995|sp|Q31WG0|YGFZ_SHIBS RecName: Full=tRNA-modifying protein ygfZ gi|81246890|gb|ABB67598.1| conserved hypothetical protein [Shigella boydii Sb227] gi|320184557|gb|EFW59358.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella flexneri CDC 796-83] gi|332090898|gb|EGI95989.1| tRNA-modifying protein ygfZ [Shigella boydii 3594-74] Length = 326 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|320540113|ref|ZP_08039768.1| putative predicted folate-dependent regulatory protein [Serratia symbiotica str. Tucson] gi|320029779|gb|EFW11803.1| putative predicted folate-dependent regulatory protein [Serratia symbiotica str. Tucson] Length = 328 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 133 HNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 H++ +D + + L I G I+D + + P + L GIS +KGCY GQE+ Sbjct: 179 HDQAELNDSRQWLALDIEAGYPIIDNANS---AQLIPQATNLQALQGISFSKGCYTGQEM 235 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 V+R + R ++ + G P + +D+E+ Sbjct: 236 VARAKFRGANKRALYWLEGRAGRTPQAA----EDLEL 268 >gi|284008423|emb|CBA74869.1| aminomethyltransferase [Arsenophonus nasoniae] Length = 328 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 37/246 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-T 64 L++ SFI G A +LQ +TAD+ TL + +A +GK+ + E Sbjct: 25 LNDWSFITATGVDAEKYLQGQLTADITTLTPQQHILTAHCDAKGKMWSTLRLFHYNEGFG 84 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNSSFIDERFS 121 +IL + + + +L Y + S + + QP + GV ++ ++ S + ++ Sbjct: 85 YILRTSVAAKQ--LSELKKYAVFSQITLSQQPNIMLLGVAGQGARDRLNNHFSQLPDQEK 142 Query: 122 IADVLLHRTWGH----NEK--IASDIKTYHELR----------------INHGI----VD 155 L T H +E+ I +D T EL I GI V+ Sbjct: 143 AVIHLEQTTLLHFSVPSERFLIVTDSATATELTKHFPQHGDSQQWLAFDIAAGIANIDVE 202 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLP 214 + F+P + L L IS KGCY GQE V+R ++R ++ + GT + LP Sbjct: 203 NSEQFIPQAV----NLQALPASISFHKGCYSGQETVARAKYRGANKRAMFWLAGTANTLP 258 Query: 215 PSGSPI 220 +G I Sbjct: 259 KTGEAI 264 >gi|156743472|ref|YP_001433601.1| glycine cleavage T protein [Roseiflexus castenholzii DSM 13941] gi|156234800|gb|ABU59583.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus castenholzii DSM 13941] Length = 337 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 24/30 (80%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LL+ +S TKGCY+GQE+++R++ R + KR Sbjct: 236 LLDAVSFTKGCYVGQEIIARMESRGRLAKR 265 >gi|238896438|ref|YP_002921176.1| putative global regulator [Klebsiella pneumoniae NTUH-K2044] gi|238548758|dbj|BAH65109.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 327 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V Sbjct: 178 RGEAQFNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 +R + R ++ ++GT +P SG +D+E+ Sbjct: 236 ARAKFRGANKRALWTLSGTASRVPESG-----EDLEL 267 >gi|197123340|ref|YP_002135291.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K] gi|196173189|gb|ACG74162.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K] Length = 304 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 D+ LRI G+ D + ++ P +A + IS +KGCYIGQEVV R R Sbjct: 170 DLAELESLRILAGVARFGAD-MDASRLPMEAGLTR-AAISFSKGCYIGQEVVLRATARGH 227 Query: 200 IRKRPMIITGTDDLPPS---GSPILTDDIEIGTL 230 +++ + + +LPP G+P++ E+G + Sbjct: 228 LQRGLVQL----ELPPGAGPGTPLVAGGQEVGAV 257 >gi|309785295|ref|ZP_07679926.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617] gi|308926415|gb|EFP71891.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617] Length = 305 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246 >gi|171058559|ref|YP_001790908.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6] gi|170776004|gb|ACB34143.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6] Length = 319 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 27/227 (11%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++ G A+ FL + ++ DV L AR +A QG++L L +K + L Sbjct: 20 MRASGADAVSFLHSQLSNDVTRLDTGHARLAAYCNAQGRMLASLLYAKRSAEEVWLLCSA 79 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSSFIDER---- 119 + +L + LR+ + VL W + + ER Sbjct: 80 DLLPVTLKRLSMFVLRAKARLSDASGELAVLGLAGQAGADWLGADAPAGAWDKSERDGAM 139 Query: 120 -FSIADVLLHRTW---GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFP 167 + DV W G + ++ + L ++ GI P P Sbjct: 140 HVRLPDVAGVPRWLWIGPAAAAEAVLQALPVVAESDWQWLDVSAGIA-PVVAATSGQFVP 198 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +L+ G+ KGCY GQEVV+R Q+ +++R ++ D+P Sbjct: 199 QMLNYELVGGVDFKKGCYPGQEVVARSQYLGKLKRRAFLL--ASDVP 243 >gi|300936035|ref|ZP_07150983.1| folate-binding protein YgfZ [Escherichia coli MS 21-1] gi|300458827|gb|EFK22320.1| folate-binding protein YgfZ [Escherichia coli MS 21-1] Length = 305 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSRQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246 >gi|293449221|ref|ZP_06663642.1| global regulator [Escherichia coli B088] gi|291322311|gb|EFE61740.1| global regulator [Escherichia coli B088] Length = 326 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|325964194|ref|YP_004242100.1| glycine cleavage system protein T (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] gi|323470281|gb|ADX73966.1| glycine cleavage system T protein (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] Length = 361 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 11/85 (12%) Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221 PH+ +DLL + L KGCY GQE +SR+ + +R + + LP +GSP+L Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETISRVHNLGHPPRRLVFLQLDGSQHTLPQAGSPVL 288 Query: 222 TDDIEIGTLGVV-----VGKKALAI 241 + ++GT+ V +G ALA+ Sbjct: 289 LGERKVGTVTSVAQHYEMGPVALAV 313 >gi|126642848|ref|YP_001085832.1| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978] Length = 217 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P + + G++ KGCY+GQE+V+R+ + + ++ GT D P + L +D+E Sbjct: 115 PQELRLHQREGVNYDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVE 173 Query: 227 I--------GTLGVVVGKKA 238 + G + +VV K A Sbjct: 174 VVNSTQTTDGYIALVVAKPA 193 >gi|118497380|ref|YP_898430.1| hypothetical protein FTN_0786 [Francisella tularensis subsp. novicida U112] gi|195536070|ref|ZP_03079077.1| hypothetical protein FTE_1029 [Francisella tularensis subsp. novicida FTE] gi|118423286|gb|ABK89676.1| protein of unknown function [Francisella novicida U112] gi|194372547|gb|EDX27258.1| hypothetical protein FTE_1029 [Francisella tularensis subsp. novicida FTE] Length = 248 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 34/216 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62 +N ++V G FLQ + TAD+ L + +LT +G+I+ + I Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDSDILLTAFANLKGRIISLCFVKFISN 62 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + +L +++ D L+ L Y + S V P + L + + F N + + I Sbjct: 63 EKLLLSVEQEVFDDLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLI 119 Query: 123 ADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG--- 177 +++ + N K+A+ IN + FLP A +DL N Sbjct: 120 SEMTFEQVKKENIFNKLAT---------INAANFEK---FLP-------AELDLDNVDKV 160 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|74313456|ref|YP_311875.1| putative global regulator [Shigella sonnei Ss046] gi|118577997|sp|Q3YXX2|YGFZ_SHISS RecName: Full=tRNA-modifying protein ygfZ gi|73856933|gb|AAZ89640.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323167896|gb|EFZ53586.1| tRNA-modifying protein ygfZ [Shigella sonnei 53G] Length = 326 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|187731975|ref|YP_001881668.1| putative global regulator [Shigella boydii CDC 3083-94] gi|226730810|sp|B2U0R5|YGFZ_SHIB3 RecName: Full=tRNA-modifying protein ygfZ gi|187428967|gb|ACD08241.1| tRNA-modifying protein [Shigella boydii CDC 3083-94] gi|320175914|gb|EFW50992.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella dysenteriae CDC 74-1112] Length = 326 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|16130800|ref|NP_417374.1| Hda suppressor; also involved in methylthio modification at 2-methylthio-6-iodeadenosine in tRNA [Escherichia coli str. K-12 substr. MG1655] gi|24114152|ref|NP_708662.1| putative global regulator [Shigella flexneri 2a str. 301] gi|30064210|ref|NP_838381.1| putative global regulator [Shigella flexneri 2a str. 2457T] gi|89109677|ref|AP_003457.1| predicted folate-dependent regulatory protein [Escherichia coli str. K-12 substr. W3110] gi|110806801|ref|YP_690321.1| putative global regulator [Shigella flexneri 5 str. 8401] gi|157156395|ref|YP_001464236.1| putative global regulator [Escherichia coli E24377A] gi|157162358|ref|YP_001459676.1| putative global regulator [Escherichia coli HS] gi|170082459|ref|YP_001731779.1| folate-dependent regulatory protein [Escherichia coli str. K-12 substr. DH10B] gi|188494932|ref|ZP_03002202.1| tRNA-modifying protein [Escherichia coli 53638] gi|191165963|ref|ZP_03027799.1| tRNA-modifying protein ygfZ [Escherichia coli B7A] gi|193063561|ref|ZP_03044650.1| tRNA-modifying protein ygfZ [Escherichia coli E22] gi|193070568|ref|ZP_03051507.1| tRNA-modifying protein ygfZ [Escherichia coli E110019] gi|194426392|ref|ZP_03058947.1| tRNA-modifying protein ygfZ [Escherichia coli B171] gi|194436847|ref|ZP_03068947.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1] gi|218555446|ref|YP_002388359.1| putative global regulator [Escherichia coli IAI1] gi|218696493|ref|YP_002404160.1| putative global regulator [Escherichia coli 55989] gi|238902023|ref|YP_002927819.1| putative folate-dependent regulatory protein [Escherichia coli BW2952] gi|253772261|ref|YP_003035092.1| global regulator [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162810|ref|YP_003045918.1| putative global regulator [Escherichia coli B str. REL606] gi|256019303|ref|ZP_05433168.1| putative global regulator [Shigella sp. D9] gi|256024591|ref|ZP_05438456.1| putative global regulator [Escherichia sp. 4_1_40B] gi|260845566|ref|YP_003223344.1| putative folate-dependent regulatory protein [Escherichia coli O103:H2 str. 12009] gi|297518191|ref|ZP_06936577.1| putative global regulator [Escherichia coli OP50] gi|301027803|ref|ZP_07191108.1| folate-binding protein YgfZ [Escherichia coli MS 196-1] gi|307139586|ref|ZP_07498942.1| putative global regulator [Escherichia coli H736] gi|307310483|ref|ZP_07590131.1| folate-binding protein YgfZ [Escherichia coli W] gi|312972860|ref|ZP_07787033.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70] gi|331643589|ref|ZP_08344720.1| tRNA-modifying protein YgfZ [Escherichia coli H736] gi|331669634|ref|ZP_08370480.1| tRNA-modifying protein YgfZ [Escherichia coli TA271] gi|331678886|ref|ZP_08379560.1| tRNA-modifying protein YgfZ [Escherichia coli H591] gi|332280417|ref|ZP_08392830.1| tRNA-modifying protein ygfZ [Shigella sp. D9] gi|83287993|sp|P0ADE8|YGFZ_ECOLI RecName: Full=tRNA-modifying protein ygfZ gi|83287994|sp|P0ADE9|YGFZ_SHIFL RecName: Full=tRNA-modifying protein ygfZ gi|122366369|sp|Q0T0Z9|YGFZ_SHIF8 RecName: Full=tRNA-modifying protein ygfZ gi|166979582|sp|A7ZR07|YGFZ_ECO24 RecName: Full=tRNA-modifying protein ygfZ gi|166979583|sp|A8A439|YGFZ_ECOHS RecName: Full=tRNA-modifying protein ygfZ gi|226730795|sp|B7LYG2|YGFZ_ECO8A RecName: Full=tRNA-modifying protein ygfZ gi|226730796|sp|B1XEI5|YGFZ_ECODH RecName: Full=tRNA-modifying protein ygfZ gi|254814149|sp|B7LF83|YGFZ_ECO55 RecName: Full=tRNA-modifying protein ygfZ gi|259710249|sp|C5A0H0|YGFZ_ECOBW RecName: Full=tRNA-modifying protein ygfZ gi|887848|gb|AAA83079.1| ORF_o326 [Escherichia coli] gi|1789265|gb|AAC75936.1| Hda suppressor; also involved in methylthio modification at 2-methylthio-6-iodeadenosine in tRNA [Escherichia coli str. K-12 substr. MG1655] gi|24053292|gb|AAN44369.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042467|gb|AAP18191.1| hypothetical protein S3083 [Shigella flexneri 2a str. 2457T] gi|85675710|dbj|BAE76963.1| predicted folate-dependent regulatory protein [Escherichia coli str. K12 substr. W3110] gi|110616349|gb|ABF05016.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|157068038|gb|ABV07293.1| tRNA-modifying protein ygfZ [Escherichia coli HS] gi|157078425|gb|ABV18133.1| tRNA-modifying protein ygfZ [Escherichia coli E24377A] gi|169890294|gb|ACB04001.1| predicted folate-dependent regulatory protein [Escherichia coli str. K-12 substr. DH10B] gi|188490131|gb|EDU65234.1| tRNA-modifying protein [Escherichia coli 53638] gi|190903911|gb|EDV63624.1| tRNA-modifying protein ygfZ [Escherichia coli B7A] gi|192930838|gb|EDV83443.1| tRNA-modifying protein ygfZ [Escherichia coli E22] gi|192956151|gb|EDV86615.1| tRNA-modifying protein ygfZ [Escherichia coli E110019] gi|194415700|gb|EDX31967.1| tRNA-modifying protein ygfZ [Escherichia coli B171] gi|194424329|gb|EDX40316.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1] gi|218353225|emb|CAU99146.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli 55989] gi|218362214|emb|CAQ99832.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli IAI1] gi|238862419|gb|ACR64417.1| predicted folate-dependent regulatory protein [Escherichia coli BW2952] gi|242378429|emb|CAQ33210.1| folate-binding protein [Escherichia coli BL21(DE3)] gi|253323305|gb|ACT27907.1| folate-binding protein YgfZ [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974711|gb|ACT40382.1| putative global regulator [Escherichia coli B str. REL606] gi|253978877|gb|ACT44547.1| putative global regulator [Escherichia coli BL21(DE3)] gi|257760713|dbj|BAI32210.1| predicted folate-dependent regulatory protein [Escherichia coli O103:H2 str. 12009] gi|260448056|gb|ACX38478.1| folate-binding protein YgfZ [Escherichia coli DH1] gi|299879065|gb|EFI87276.1| folate-binding protein YgfZ [Escherichia coli MS 196-1] gi|306909378|gb|EFN39873.1| folate-binding protein YgfZ [Escherichia coli W] gi|309703258|emb|CBJ02593.1| tRNA-modifying protein [Escherichia coli ETEC H10407] gi|310332802|gb|EFQ00016.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70] gi|313647938|gb|EFS12384.1| tRNA-modifying protein ygfZ [Shigella flexneri 2a str. 2457T] gi|315062202|gb|ADT76529.1| predicted folate-dependent regulatory protein [Escherichia coli W] gi|315137497|dbj|BAJ44656.1| putative global regulator [Escherichia coli DH1] gi|315614945|gb|EFU95583.1| tRNA-modifying protein ygfZ [Escherichia coli 3431] gi|320202559|gb|EFW77129.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli EC4100B] gi|323162510|gb|EFZ48360.1| tRNA-modifying protein ygfZ [Escherichia coli E128010] gi|323183453|gb|EFZ68850.1| tRNA-modifying protein ygfZ [Escherichia coli 1357] gi|323377214|gb|ADX49482.1| folate-binding protein YgfZ [Escherichia coli KO11] gi|323935870|gb|EGB32169.1| folate-binding protein YgfZ [Escherichia coli E1520] gi|323941581|gb|EGB37761.1| folate-binding protein YgfZ [Escherichia coli E482] gi|323960805|gb|EGB56426.1| folate-binding protein YgfZ [Escherichia coli H489] gi|323971664|gb|EGB66893.1| folate-binding protein YgfZ [Escherichia coli TA007] gi|331037060|gb|EGI09284.1| tRNA-modifying protein YgfZ [Escherichia coli H736] gi|331063302|gb|EGI35215.1| tRNA-modifying protein YgfZ [Escherichia coli TA271] gi|331073716|gb|EGI45037.1| tRNA-modifying protein YgfZ [Escherichia coli H591] gi|332102769|gb|EGJ06115.1| tRNA-modifying protein ygfZ [Shigella sp. D9] gi|332344795|gb|AEE58129.1| tRNA-modifying protein YgfZ [Escherichia coli UMNK88] gi|332753734|gb|EGJ84113.1| tRNA-modifying protein ygfZ [Shigella flexneri K-671] gi|332754471|gb|EGJ84837.1| tRNA-modifying protein ygfZ [Shigella flexneri 2747-71] gi|332765829|gb|EGJ96042.1| folate-dependent regulatory protein [Shigella flexneri 2930-71] gi|332999669|gb|EGK19254.1| tRNA-modifying protein ygfZ [Shigella flexneri VA-6] gi|333000715|gb|EGK20290.1| tRNA-modifying protein ygfZ [Shigella flexneri K-272] gi|333015058|gb|EGK34401.1| tRNA-modifying protein ygfZ [Shigella flexneri K-304] gi|333015229|gb|EGK34571.1| tRNA-modifying protein ygfZ [Shigella flexneri K-227] Length = 326 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|315289438|gb|EFU48833.1| folate-binding protein YgfZ [Escherichia coli MS 110-3] gi|315295687|gb|EFU55007.1| folate-binding protein YgfZ [Escherichia coli MS 16-3] Length = 305 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246 >gi|227888448|ref|ZP_04006253.1| GCV family glycine cleavage complex aminomethyltransferase [Escherichia coli 83972] gi|300980307|ref|ZP_07174961.1| folate-binding protein YgfZ [Escherichia coli MS 45-1] gi|301049317|ref|ZP_07196287.1| folate-binding protein YgfZ [Escherichia coli MS 185-1] gi|227834717|gb|EEJ45183.1| GCV family glycine cleavage complex aminomethyltransferase [Escherichia coli 83972] gi|300298916|gb|EFJ55301.1| folate-binding protein YgfZ [Escherichia coli MS 185-1] gi|300409315|gb|EFJ92853.1| folate-binding protein YgfZ [Escherichia coli MS 45-1] gi|315293868|gb|EFU53220.1| folate-binding protein YgfZ [Escherichia coli MS 153-1] Length = 305 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246 >gi|209920352|ref|YP_002294436.1| putative global regulator [Escherichia coli SE11] gi|260857021|ref|YP_003230912.1| putative folate-dependent regulatory protein [Escherichia coli O26:H11 str. 11368] gi|260869575|ref|YP_003235977.1| putative folate-dependent regulatory protein [Escherichia coli O111:H- str. 11128] gi|226730798|sp|B6I731|YGFZ_ECOSE RecName: Full=tRNA-modifying protein ygfZ gi|209913611|dbj|BAG78685.1| conserved hypothetical protein [Escherichia coli SE11] gi|257755670|dbj|BAI27172.1| predicted folate-dependent regulatory protein [Escherichia coli O26:H11 str. 11368] gi|257765931|dbj|BAI37426.1| predicted folate-dependent regulatory protein [Escherichia coli O111:H- str. 11128] gi|323173896|gb|EFZ59525.1| tRNA-modifying protein ygfZ [Escherichia coli LT-68] gi|323180343|gb|EFZ65895.1| tRNA-modifying protein ygfZ [Escherichia coli 1180] gi|323946616|gb|EGB42639.1| folate-binding protein YgfZ [Escherichia coli H120] gi|324119939|gb|EGC13818.1| folate-binding protein YgfZ [Escherichia coli E1167] Length = 326 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|88855763|ref|ZP_01130426.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1] gi|88815087|gb|EAR24946.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1] Length = 343 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 58/262 (22%), Positives = 120/262 (45%), Gaps = 37/262 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 S V L++++ + + G + +L ++ T + L + + +L P G+I + Sbjct: 22 QSVVELADRAVLTITGPDRLTWLDSLTTQALTGLGAGDSAETLLLNPNGRIEHAMRVVDD 81 Query: 61 EEDTFILEIDRSKRDSL---IDKLLFY-----KLRSNVIIEIQ-------PI---NGVVL 102 E ++L ID S R++L +D++ F RS+ + I P+ + + L Sbjct: 82 SETLWLL-IDGSAREALAKWLDRMRFTLRVEIADRSDDFVTIGSFGDLGLPVAVSHEIPL 140 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINH 151 WN +++ + ++S A+ TW + E + AS + LRI Sbjct: 141 VWND--SWAAVARGGHQYSRAEQHPGATWNYRESLVAVDSDLSDFAASGSLAFEALRIAA 198 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209 +T+ +I PH+ L + + + L+KGCY GQE V+++ + +R ++ + G Sbjct: 199 WRPWFSTEVDDRSI-PHE-LDWMRSAVHLSKGCYRGQETVAKVHNLGHPPRRLVLLHLDG 256 Query: 210 TDD-LPPSGSPILTDDIEIGTL 230 ++ LP +G+ + + +GT+ Sbjct: 257 SEGALPEAGAEVSLGEKVVGTV 278 >gi|332752935|gb|EGJ83319.1| tRNA-modifying protein ygfZ [Shigella flexneri 4343-70] gi|333000021|gb|EGK19604.1| tRNA-modifying protein ygfZ [Shigella flexneri K-218] Length = 326 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSVSRLPEAG-----EDLEL 267 >gi|188534912|ref|YP_001908709.1| putative global regulator [Erwinia tasmaniensis Et1/99] gi|188029954|emb|CAO97838.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 328 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 40/258 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59 ++ + L + + G I +LQ +T DV +P R +A +GK+ L + Sbjct: 19 LTLISLEAWALVNASGADHISYLQGQVTLDVADMPASQHRPAAHCDAKGKMWSNLRLFHR 78 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------ 95 ++ +I RS RD+ + +L Y + + + + Sbjct: 79 MDGLAYIER--RSLRDNQLSELKKYAVFAKITLAADDESVLLGVAGFQARAALANLFSTL 136 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRIN 150 P G + + T ERF + + EK+A +D + L I Sbjct: 137 PDAGSPVIQQDDSTLLWFDLPAERFLLV-TPAEKAAEIAEKLAGEAQLNDSTQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P D S F P + L IS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGF--PVIDAATSAQFIPQATNLQALGAISFKKGCYTGQEMVARAKFRGANKRALYWLAG 253 Query: 210 TDDLPPSGSPILTDDIEI 227 T + P+ D +E+ Sbjct: 254 TAGV----VPVANDALEM 267 >gi|77457584|ref|YP_347089.1| glycine cleavage T protein [Pseudomonas fluorescens Pf0-1] gi|77381587|gb|ABA73100.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 313 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 10/102 (9%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 ++R G V P+T L P + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 176 QIRAGIGQVMPSTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232 Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 + +LP G+ + + G +G+ LA AR +K Sbjct: 233 RVKLDAAELPEPGTALFAP-----SHGSSIGEVVLA-ARTEK 268 >gi|324115084|gb|EGC09049.1| folate-binding protein YgfZ [Escherichia fergusonii B253] Length = 326 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|115372192|ref|ZP_01459503.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1] gi|115370894|gb|EAU69818.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1] Length = 358 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%) Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPM 205 LR+ G+ D + +TI P +A +L + IS KGCYIGQEV++R R ++ RK Sbjct: 229 LRVEAGVPRYGQDMVDTTI-PLEA--NLTHAISYNKGCYIGQEVIARATFRGHMNRKLTG 285 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234 ++ G + P G+ + + ++G L VV Sbjct: 286 LLLGEAEAEP-GTELRKGEKKVGWLTSVV 313 >gi|325498459|gb|EGC96318.1| global regulator [Escherichia fergusonii ECD227] Length = 326 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|319779568|ref|YP_004130481.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9] gi|317109592|gb|ADU92338.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9] Length = 290 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 26/32 (81%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 +D++N IS KGCY+GQEV++R+ +++ ++R Sbjct: 192 LDIINAISFNKGCYVGQEVIARLHYKSKPKRR 223 >gi|326561940|gb|EGE12275.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 7169] gi|326570316|gb|EGE20360.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC1] gi|326573625|gb|EGE23584.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis CO72] Length = 233 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+ Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 ++R+ + + I G +PP+G + I + L G +AL IAR Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPPTGGNMGRMSI-VNALATDTGFEALVIAR 210 >gi|298345557|ref|YP_003718244.1| glycine cleavage T protein [Mobiluncus curtisii ATCC 43063] gi|304391113|ref|ZP_07373065.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235618|gb|ADI66750.1| glycine cleavage T protein (aminomethyl transferase) [Mobiluncus curtisii ATCC 43063] gi|304325996|gb|EFL93242.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 354 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192 N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+ Sbjct: 189 NALMKADLGAWEAVRISLWHPRLGREGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 245 Query: 193 RIQHRNIIRKRPMI--ITGT-DDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247 ++ +R +R I G+ ++LP GSP+ +D E+G L V + + Sbjct: 246 KLTNRGRPPRRLTFLDIDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 305 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + L V G R S Sbjct: 306 KRQVNPAEILLVEGTRAAQS 325 >gi|261345600|ref|ZP_05973244.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541] gi|282566080|gb|EFB71615.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541] Length = 327 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 100/258 (38%), Gaps = 50/258 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEE 62 + L N I + G A +LQ +TAD+ TL + +A P+GK+ L + Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADISTLSHAHTL-TAHCDPKGKMWSDLRLFHHLNG 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------------------INGVVLS 103 ++I RS D + +L Y + S V E +P N + Sbjct: 82 YSYIER--RSVSDIQLAELKKYAVFSKVTFEKKPELKLLGVAGQGARQALEAVFNSLPDD 139 Query: 104 WNQ-----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------ELRI 149 NQ E T + + ERF LL KI+ +K H E+ Sbjct: 140 QNQVVVDGETTILHFALPAERF-----LLITNDATALKISDTLKAIHVADSQWLALEIAA 194 Query: 150 NHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 ++D P A L L +GIS KGCY GQE+V+R + R ++ + Sbjct: 195 GFAVIDQENS---GQHLPQAANLQALPHGISFQKGCYTGQEMVARAKFRGANKRAMYWLI 251 Query: 209 GTDDLPPSGSPILTDDIE 226 GT S P++ + +E Sbjct: 252 GTG----STLPVIGEGVE 265 >gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] Length = 369 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 10/91 (10%) Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224 A +DL+ + L KGCY GQE V+R+ + +R +++ TD+ P +G+P++ + Sbjct: 266 AEVDLVGPAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDEPPSAGTPVMREG 325 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G +G V G+ ALA+ + + D A Sbjct: 326 RAVGFVGTAVHHHELGQIALAVVKRNVPDDA 356 >gi|311743212|ref|ZP_07717019.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272] gi|311313280|gb|EFQ83190.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272] Length = 318 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 36/272 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L A+ T +L LP +L+PQG+I F + +++ Sbjct: 48 VDLSHRDVVTVAGPDRLTWLHALTTQYLLDLPPGRPTDVLLLSPQGRIEHAF--TGVDDG 105 Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L++ L + S V V L+ +Q E Sbjct: 106 ATFTVHTEPGAGAPLVEFLDRMRFMSRVE--------VTLATDQWAVIGLPGLAWEVRPR 157 Query: 123 ADVL-LHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNG 177 AD+ L G + + S + LRI G +D + +P + L L + Sbjct: 158 ADLASLPAVLG--DPVGS--WAWEALRIEAGRPRIGLDTDERAIP------NELGLLGSA 207 Query: 178 ISLTKGCYIGQEVVSRIQ-----HRNIIRKRPMIITGT-DDLPPSGSPIL-TDDIEIGTL 230 + L KGCY GQE V+R+ R ++R + + G+ D LPP G+ +L +G + Sbjct: 208 VHLDKGCYRGQETVARVHTLGRPPRRLVR---LHLDGSVDHLPPVGTDLLDPAGTRVGAI 264 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 G L + V + + LT GV Sbjct: 265 GTSARHHELGPVALGVVKRNVDPTLVLTADGV 296 >gi|82778336|ref|YP_404685.1| putative global regulator [Shigella dysenteriae Sd197] gi|118577996|sp|Q32BW1|YGFZ_SHIDS RecName: Full=tRNA-modifying protein ygfZ gi|81242484|gb|ABB63194.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 326 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|288933622|ref|YP_003437681.1| folate-binding protein YgfZ [Klebsiella variicola At-22] gi|288888351|gb|ADC56669.1| folate-binding protein YgfZ [Klebsiella variicola At-22] Length = 327 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++GT S P +D+E+ Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267 >gi|328474112|gb|EGF44917.1| hypothetical protein VP10329_15430 [Vibrio parahaemolyticus 10329] Length = 322 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246 >gi|28899357|ref|NP_798962.1| hypothetical protein VP2583 [Vibrio parahaemolyticus RIMD 2210633] gi|260362198|ref|ZP_05775185.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030] gi|260878954|ref|ZP_05891309.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034] gi|260897479|ref|ZP_05905975.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466] gi|260899629|ref|ZP_05908024.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037] gi|81726929|sp|Q87LM8|YGFZ_VIBPA RecName: Full=tRNA-modifying protein ygfZ gi|28807593|dbj|BAC60846.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308088017|gb|EFO37712.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466] gi|308090453|gb|EFO40148.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034] gi|308108226|gb|EFO45766.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037] gi|308113962|gb|EFO51502.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030] Length = 322 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246 >gi|310818801|ref|YP_003951159.1| glycine cleavage system t protein [Stigmatella aurantiaca DW4/3-1] gi|309391873|gb|ADO69332.1| Glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%) Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPM 205 LR+ G+ D + +TI P +A +L + IS KGCYIGQEV++R R + RK Sbjct: 204 LRVEAGVPRYGQDMVDTTI-PLEA--NLTHAISYNKGCYIGQEVIARATFRGHMNRKLTG 260 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234 ++ G + P G+ + + ++G L VV Sbjct: 261 LLLGEAEAEP-GTELRKGEKKVGWLTSVV 288 >gi|116075586|ref|ZP_01472845.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916] gi|116066901|gb|EAU72656.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916] Length = 280 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 44/267 (16%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G FL +A + P + + LT G++ LL + D +L Sbjct: 16 LLRLTGGGTRQFLHGQTSAAIEQAPEQSLIHTCWLTATGRVRALLEVRLDGEGADVLVLC 75 Query: 69 IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D D+++F R V + +QP L W + + S + + + Sbjct: 76 GDADAVLEGFDRVIFPADRVKVNAAEPQRRVQRLQPAP-EPLQWQDDVVWPASHPLPDPW 134 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + V +D + + RI+HG+ + + T + + L + +SL Sbjct: 135 AALPV-------------ADPEQLEQWRISHGLPLSSQELNGET---NPLELGLADWVSL 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVG 235 KGCY+GQE V+++ R+ ++++ T G LP +G + V G Sbjct: 179 EKGCYLGQETVAKLVSRDGVKQKLRCWTIPQQDGNTPLPQAGDTLH-----------VAG 227 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGV 262 ++A I K + +G+AL G Sbjct: 228 ERAGVITSSQKTGQCL-QGLALVRRGC 253 >gi|89256440|ref|YP_513802.1| hypothetical protein FTL_1115 [Francisella tularensis subsp. holarctica LVS] gi|115314875|ref|YP_763598.1| hypothetical protein FTH_1088 [Francisella tularensis subsp. holarctica OSU18] gi|169656621|ref|YP_001428607.2| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367777|ref|ZP_04983798.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp. holarctica 257] gi|254369408|ref|ZP_04985420.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|290953920|ref|ZP_06558541.1| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica URFT1] gi|295312720|ref|ZP_06803463.1| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica URFT1] gi|89144271|emb|CAJ79554.1| hypothetical protein FTL_1115 [Francisella tularensis subsp. holarctica LVS] gi|115129774|gb|ABI82961.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253588|gb|EBA52682.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp. holarctica 257] gi|157122358|gb|EDO66498.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|164551689|gb|ABU61651.2| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 248 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 30/214 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P N L + + F N + + ++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNNDYALFFTKTG-FLNHDILTKGSLTSE 121 Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179 + + N K+A+ IN + FLP A +DL N + Sbjct: 122 MTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|290511312|ref|ZP_06550681.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55] gi|289776305|gb|EFD84304.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55] Length = 327 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++GT S P +D+E+ Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267 >gi|262404784|ref|ZP_06081339.1| glycine cleavage T-protein [Vibrio sp. RC586] gi|262349816|gb|EEY98954.1| glycine cleavage T-protein [Vibrio sp. RC586] Length = 323 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++GIS +KGCY GQE V+R ++R I ++ I+ G P S Sbjct: 204 PQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNITAPFS 253 >gi|153840079|ref|ZP_01992746.1| protein YgfZ [Vibrio parahaemolyticus AQ3810] gi|149746325|gb|EDM57384.1| protein YgfZ [Vibrio parahaemolyticus AQ3810] Length = 322 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L GIS TKGCY GQE V+R ++R ++ I+ G Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246 >gi|320195017|gb|EFW69646.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli WV_060327] Length = 326 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|312171240|emb|CBX79499.1| tRNA-modifying protein ygfZ [Erwinia amylovora ATCC BAA-2158] Length = 328 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 32/244 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--- 57 ++ + L + + G I +LQ +T DV LP+ R +A +GK+ + Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78 Query: 58 ----SKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-- 110 + IE + + +++ K+ ++ K+ +V++ + N T Sbjct: 79 AGGMAYIERRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLPD 138 Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIA---------SDIKTYHELRINHG- 152 +S+ + LL T +IA +D + L I G Sbjct: 139 AESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAGW 198 Query: 153 -IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 I+D T + P A + L+ IS KGCY GQE+V+R + R ++ + G Sbjct: 199 PIIDAATS---AQFIPQAANLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKA 255 Query: 212 DLPP 215 + P Sbjct: 256 GVVP 259 >gi|54297492|ref|YP_123861.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris] gi|53751277|emb|CAH12688.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris] Length = 352 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 273 Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230 ++ + +D+ SG + +D E+G L Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDEDTEVGEL 308 >gi|311278182|ref|YP_003940413.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1] gi|308747377|gb|ADO47129.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1] Length = 327 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 50/243 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G+ + +LQ +TADV L A +GK+ + + +E Sbjct: 24 LDDWALATITGQDSEKYLQGQVTADVAQLTEHQHLLVAHCDAKGKMWSNLRLFRQQEGFA 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL----SWNQEHTFSN--SSFID-- 117 +E RS RD+ + +L Y + S V I P + VL + +N S D Sbjct: 84 WIE-RRSVRDAQLTELKKYAVFSKVAIA--PNDDRVLLGVAGFQARAALANLFSQLPDRD 140 Query: 118 ------------------ERF----------SIADVLLHRTWGHNEKIASDIKTYHELRI 149 ERF +AD L E ++ + + L I Sbjct: 141 MPAVTENDSTLLWFEHPAERFLLIVSADAAERVADAL------RGEAQRNNSQQWLALNI 194 Query: 150 NHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 G ++DP + P + L GIS KGCY GQE+V+R + R ++ + Sbjct: 195 EAGLPVIDPANS---AQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWYL 251 Query: 208 TGT 210 G Sbjct: 252 AGA 254 >gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] Length = 362 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGV 232 + + LTKGCY GQE V+R+ + +R +++ G ++LP G P++ +G +G Sbjct: 241 SAVHLTKGCYRGQETVARVANLGRPPRRLVLLHLDAGDEELPRPGDPVVNGGRPVGRVGT 300 Query: 233 V-----VGKKALAIAR 243 V +G ALA+ + Sbjct: 301 VTLHHELGAVALALVK 316 >gi|152971844|ref|YP_001336953.1| putative global regulator [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956693|gb|ABR78723.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 329 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + L I G+ P D S F P + L GIS KGCY GQE+V+R + R Sbjct: 189 QQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGAN 246 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ ++GT S P +D+E+ Sbjct: 247 KRALWTLSGT----ASRVPEAGEDLEL 269 >gi|323966700|gb|EGB62132.1| folate-binding protein YgfZ [Escherichia coli M863] gi|327251662|gb|EGE63348.1| tRNA-modifying protein ygfZ [Escherichia coli STEC_7v] Length = 326 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|291618735|ref|YP_003521477.1| YgfZ [Pantoea ananatis LMG 20103] gi|291153765|gb|ADD78349.1| YgfZ [Pantoea ananatis LMG 20103] Length = 403 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 + P A M L+ IS KGCY GQE+V+R ++R ++ ++G S P Sbjct: 282 AQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQ----ASHLPAAN 337 Query: 223 DDIEI 227 D +E+ Sbjct: 338 DSLEL 342 >gi|323188703|gb|EFZ73988.1| tRNA-modifying protein ygfZ [Escherichia coli RN587/1] Length = 326 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|206575880|ref|YP_002236645.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342] gi|226730801|sp|B5XUE6|YGFZ_KLEP3 RecName: Full=tRNA-modifying protein ygfZ gi|206564938|gb|ACI06714.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342] Length = 327 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191 E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +R + R ++ ++GT S P +D+E+ Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267 >gi|91212277|ref|YP_542263.1| putative global regulator [Escherichia coli UTI89] gi|117625129|ref|YP_854117.1| putative global regulator [Escherichia coli APEC O1] gi|218559891|ref|YP_002392804.1| global regulator [Escherichia coli S88] gi|218691023|ref|YP_002399235.1| putative global regulator [Escherichia coli ED1a] gi|237706457|ref|ZP_04536938.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA] gi|306812199|ref|ZP_07446397.1| putative global regulator [Escherichia coli NC101] gi|331648645|ref|ZP_08349733.1| tRNA-modifying protein YgfZ [Escherichia coli M605] gi|331659028|ref|ZP_08359970.1| tRNA-modifying protein YgfZ [Escherichia coli TA206] gi|118577994|sp|Q1R7D2|YGFZ_ECOUT RecName: Full=tRNA-modifying protein ygfZ gi|166979584|sp|A1AF88|YGFZ_ECOK1 RecName: Full=tRNA-modifying protein ygfZ gi|226730792|sp|B7MM85|YGFZ_ECO45 RecName: Full=tRNA-modifying protein ygfZ gi|254814150|sp|B7MZ51|YGFZ_ECO81 RecName: Full=tRNA-modifying protein ygfZ gi|91073851|gb|ABE08732.1| 2D-phage unknown protein [Escherichia coli UTI89] gi|115514253|gb|ABJ02328.1| putative global regulator [Escherichia coli APEC O1] gi|218366660|emb|CAR04414.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli S88] gi|218428587|emb|CAR09368.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli ED1a] gi|222034593|emb|CAP77335.1| tRNA-modifying protein ygfZ [Escherichia coli LF82] gi|226899497|gb|EEH85756.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA] gi|294490592|gb|ADE89348.1| tRNA-modifying protein ygfZ [Escherichia coli IHE3034] gi|305854237|gb|EFM54675.1| putative global regulator [Escherichia coli NC101] gi|307625529|gb|ADN69833.1| putative global regulator [Escherichia coli UM146] gi|312947431|gb|ADR28258.1| putative global regulator [Escherichia coli O83:H1 str. NRG 857C] gi|323951663|gb|EGB47538.1| folate-binding protein YgfZ [Escherichia coli H252] gi|323957381|gb|EGB53103.1| folate-binding protein YgfZ [Escherichia coli H263] gi|330908930|gb|EGH37444.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli AA86] gi|331042392|gb|EGI14534.1| tRNA-modifying protein YgfZ [Escherichia coli M605] gi|331053610|gb|EGI25639.1| tRNA-modifying protein YgfZ [Escherichia coli TA206] Length = 326 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|323453978|gb|EGB09849.1| hypothetical protein AURANDRAFT_63050 [Aureococcus anophagefferens] Length = 307 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 30/135 (22%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----------DLPP 215 P + +D L ++ KGCY+GQE+ +R + R +R+R M + D LPP Sbjct: 165 PLNCNLDALRYVAFDKGCYLGQELTARAKFRGEVRRRLMPVALQDAASAVLHNAARALPP 224 Query: 216 S----GSPIL-----------TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKG-MALTV 259 + +PI+ +G + V G +A+A + K+D A+ + + V Sbjct: 225 AEPVPDAPIVGALPAAGAKLLAAGKAVGEVVAVDGASTVAVAML-KLDFALSGDILDVDV 283 Query: 260 HGVRVKAS--FPHWY 272 G +KAS P W+ Sbjct: 284 EGTELKASPFVPAWW 298 >gi|218550146|ref|YP_002383937.1| global regulator [Escherichia fergusonii ATCC 35469] gi|226730800|sp|B7LPB2|YGFZ_ESCF3 RecName: Full=tRNA-modifying protein ygfZ gi|218357687|emb|CAQ90328.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia fergusonii ATCC 35469] Length = 326 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|84498436|ref|ZP_00997206.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649] gi|84381179|gb|EAP97063.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649] Length = 342 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 62/295 (21%), Positives = 113/295 (38%), Gaps = 63/295 (21%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V LS++ ++V G + +L +I T + L +++ S +L+P+G I I Sbjct: 45 LAVVDLSHRGVVRVTGPDRLTWLHSITTQQLTGLAPRVSTESLVLSPKGHIEHDLHIVDD 104 Query: 61 EEDTFILEIDRSKRDSLIDKL--LFYKLRSNV------------IIEIQPINGVVLSW-- 104 E T+I ++ +L+ L + + LR V + + G L+W Sbjct: 105 GESTWIT-VEPGTSPALVAWLDSMRFMLRVEVSDVTDAYAVLGEPLSAASVEGEPLAWVD 163 Query: 105 --------------NQEHTFSNSSF-------IDERFSIADVLLHRTWGHNEKIASDIKT 143 EH + + D ++ D L W + + Sbjct: 164 PWPNLVADTAAYGPETEHPGESRRWRELIVPRADLEAAVGDRPLAGIWAAEALRVAAWRP 223 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-K 202 +H + D+L + + H KGCY GQE V+R+ N+ R Sbjct: 224 RLGFETDHRTIAHEVDWLRTAVHLH-------------KGCYRGQETVARVH--NLGRPP 268 Query: 203 RPMIITGTDD----LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVD 248 R ++ D LP +G+P++ + EIG + V G ALA+ + + D Sbjct: 269 RRIVFLHLDGSGHLLPEAGAPLVLEGREIGRITSVARHHEDGPIALAVIKRNTPD 323 >gi|27904872|ref|NP_777998.1| hypothetical protein bbp391 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372575|sp|Q89AC3|YGFZ_BUCBP RecName: Full=tRNA-modifying protein ygfZ gi|27904270|gb|AAO27103.1| conserved hypothetical protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 318 Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E+ N I+D N + FP ++ LNG+ L KGCY GQE++++I + + + Sbjct: 189 EIASNFPIIDYNIN---KKFFPQSLNLEKLNGLDLKKGCYYGQEMIAKIHFKKLNKHYLH 245 Query: 206 IITG-TDDLPPSGSPI 220 ++G + +P G I Sbjct: 246 WLSGYSYPIPKIGDNI 261 >gi|260775217|ref|ZP_05884115.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450] gi|260608918|gb|EEX35080.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450] Length = 322 Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L GIS +KGCY GQE V+R ++R + ++ I+ G Sbjct: 204 PQALNVQALGGISFSKGCYTGQETVARAKYRGMNKRALQIVKG 246 >gi|323978809|gb|EGB73890.1| folate-binding protein YgfZ [Escherichia coli TW10509] Length = 326 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267 >gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] Length = 364 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRLG 300 Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269 VV G ALA + R D A+ G V V S P Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344 >gi|12323347|gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana] Length = 436 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231 L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L Sbjct: 324 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 380 Query: 232 VVVGKK 237 G K Sbjct: 381 SYTGGK 386 >gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium subsp. avium ATCC 25291] Length = 364 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRLG 300 Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269 VV G ALA + R D A+ G V V S P Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344 >gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] gi|119958875|gb|ABM15880.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] Length = 361 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ N+ + M++ G D P +G P+L +G L Sbjct: 239 VGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGASDRPSTGDPLLAGGRTVGRL 296 Query: 231 GVVV 234 G VV Sbjct: 297 GTVV 300 >gi|26249314|ref|NP_755354.1| putative global regulator [Escherichia coli CFT073] gi|81474766|sp|Q8FE70|YGFZ_ECOL6 RecName: Full=tRNA-modifying protein ygfZ gi|26109722|gb|AAN81927.1|AE016766_15 Unknown protein from 2D-page [Escherichia coli CFT073] gi|307554875|gb|ADN47650.1| tRNA-modifying protein YgfZ [Escherichia coli ABU 83972] Length = 326 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267 >gi|331674383|ref|ZP_08375143.1| tRNA-modifying protein YgfZ [Escherichia coli TA280] gi|331068477|gb|EGI39872.1| tRNA-modifying protein YgfZ [Escherichia coli TA280] Length = 326 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A++L + G E ++ + + L I G P D S F P Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ ++ G LP +G +D+E+ Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGNASRLPEAG-----EDLEL 267 >gi|296314110|ref|ZP_06864051.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC 43768] gi|296839260|gb|EFH23198.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC 43768] Length = 288 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124 ++ I +L + LR+ V+ EI G L+ + E + N +F ++ S I Sbjct: 71 DLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPNLAFAAQQDSDGICS 130 Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 ++L + A HE+R + + T A+ + Sbjct: 131 IVLPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] Length = 369 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%) Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224 A +DL+ + L KGCY GQE V+R+ + +R +++ TD P +G+P+ D Sbjct: 266 AEVDLVGPAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDQPPSAGTPVTRDG 325 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G +G V G+ ALA+ + + D A Sbjct: 326 RTVGFVGTAVHHHELGQVALAVVKRNVPDDA 356 >gi|328676869|gb|AEB27739.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Francisella cf. novicida Fx1] Length = 248 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 30/214 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P + L + + F N + + I++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLISE 121 Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179 + + N K+A+ T E FLP A +DL N + Sbjct: 122 MTFEQVKKENIFNKLATINATNFE------------KFLP-------AELDLDNVNKVVC 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|283788444|ref|YP_003368309.1| tRNA-modifying protein [Citrobacter rodentium ICC168] gi|282951898|emb|CBG91616.1| tRNA-modifying protein [Citrobacter rodentium ICC168] Length = 326 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%) Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170 ERF + A+ L + G E ++ + + L I GI P D S F P Sbjct: 159 ERFLLVTDAATAETLCEKLRGEAE--LNNSQQWLALDIEAGI--PVIDAANSAQFIPQAT 214 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + L GIS KGCY GQE+V+R + R ++ + G S P +D+E+ Sbjct: 215 NIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGK----ASRVPEAGEDLEL 267 >gi|152988054|ref|YP_001350103.1| hypothetical protein PSPA7_4761 [Pseudomonas aeruginosa PA7] gi|150963212|gb|ABR85237.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 314 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + + PP + Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALAGEDPPEPAT 246 Query: 220 ILTDDIEIGTLGVVV 234 L + ++G VV Sbjct: 247 GLFSPVHATSVGEVV 261 >gi|79367480|ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana] gi|145326078|ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana] gi|186492130|ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana] gi|51969110|dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana] gi|332195639|gb|AEE33760.1| aminomethyltransferase [Arabidopsis thaliana] gi|332195640|gb|AEE33761.1| aminomethyltransferase [Arabidopsis thaliana] gi|332195641|gb|AEE33762.1| aminomethyltransferase [Arabidopsis thaliana] Length = 432 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231 L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L Sbjct: 320 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 376 Query: 232 VVVGKK 237 G K Sbjct: 377 SYTGGK 382 >gi|160898827|ref|YP_001564409.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1] gi|160364411|gb|ABX36024.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1] Length = 315 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + G++ KGCY GQEVV+R Q R +++R + L +D+E T VV Sbjct: 199 VEGVNFKKGCYPGQEVVARSQFRGTLKRRAYLAHAQQPLATGMEVFTPEDLEQATGTVVQ 258 Query: 235 GKKA 238 A Sbjct: 259 AAPA 262 >gi|46518443|gb|AAS99703.1| At1g60990 [Arabidopsis thaliana] Length = 423 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231 L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L Sbjct: 311 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 367 Query: 232 VVVGKK 237 G K Sbjct: 368 SYTGGK 373 >gi|325204265|gb|ADY99718.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240355] Length = 287 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFSIADVL 126 ++ + +L + LR+ + EI G L + E + N +F ++ S Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFATQQDSDGICS 129 Query: 127 LHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + G +IA + HE+R + + T A+ + Sbjct: 130 IALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 181 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239 >gi|222111181|ref|YP_002553445.1| folate-binding protein ygfz [Acidovorax ebreus TPSY] gi|221730625|gb|ACM33445.1| folate-binding protein YgfZ [Acidovorax ebreus TPSY] Length = 311 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + G++ KGCY GQEVV+R Q R +++R + + G+ + D +G VV Sbjct: 205 VGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGDAEQPVGTVV 263 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +A A VD + +A T +RV A+ Sbjct: 264 ---QVATAPTGGVDALVSLQIAATGGALRVGAA 293 >gi|121594085|ref|YP_985981.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax sp. JS42] gi|120606165|gb|ABM41905.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax sp. JS42] Length = 311 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + G++ KGCY GQEVV+R Q R +++R + + G+ + D +G VV Sbjct: 205 VGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGDAEQPVGTVV 263 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +A A VD + +A T +RV A+ Sbjct: 264 ---QVAAAPTGGVDALVSLQIAATGGALRVGAA 293 >gi|254374202|ref|ZP_04989684.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571922|gb|EDN37576.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 248 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 30/214 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P + L + + F N + + I++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTK-TGFLNHDILTKGSLISE 121 Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179 + + N K+A+ IN + FLP A +DL N + Sbjct: 122 MTFEQVKKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|206603597|gb|EDZ40077.1| Putative aminomethyltransferase [Leptospirillum sp. Group II '5-way CG'] Length = 334 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 45/233 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ FLQ I + D+L K S L P+ +IL E D L Sbjct: 27 IFIEGEDRKTFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFE-DKIGLFPPA 85 Query: 72 SKRDSLID---KLLFYKLRSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDER 119 R+ I+ K LF++ ++ + I + P VL ++ FS SSF + Sbjct: 86 GTREEFINHLKKYLFFRTKAKITDMSEHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145 Query: 120 FSIADVLLHRT-WGHN-------------EKIASDIKTYHELRINHG------------I 153 + VL+H T + HN ++ + K+ + G + Sbjct: 146 -NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSKKGGVLLSESSYLTYL 204 Query: 154 VDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + PS + FP +A +D + G+S KGCY+GQE V+R++ + + + Sbjct: 205 TEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNR 256 >gi|330808065|ref|YP_004352527.1| hypothetical protein PSEBR_a1335 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376173|gb|AEA67523.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 313 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 129 RTWGHNEKIASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 RT E +D+ + ++R G V P T L P + + G+S KGCY Sbjct: 157 RTRLGTELAEADLNPWLLGQVRAGIGQVMPATREL---FIPQMLNLQAIGGVSFKKGCYT 213 Query: 187 GQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT 222 GQE+V+R+Q+ +++R + +LP G+ + + Sbjct: 214 GQEIVARMQYLGKLKRRLYRLQLDASELPEPGTALFS 250 >gi|332184093|gb|AEE26347.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Francisella cf. novicida 3523] Length = 248 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 34/216 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62 +N ++V G FLQ + TAD+ L + +LT +G+I+ + I Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDNDILLTAFANLKGRIISLCFVKFISN 62 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120 + +L +++ D L+ L Y + S V + N ++ F+ + F++ Sbjct: 63 EKLLLSVEQEVFDDLLAWLKKYGMFSKV----------SFNSNDDYALFFTKTGFLNHDV 112 Query: 121 SIADVLLHR---TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D L E I + + T IN + FLP+ + L +L Sbjct: 113 LTKDSLTSEMTFEQVQKENIFNKLAT-----INAANFEK---FLPAEL----DLDNLDKV 160 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|37527429|ref|NP_930773.1| putative global regulator [Photorhabdus luminescens subsp. laumondii TTO1] gi|81418630|sp|Q7N1C0|YGFZ_PHOLL RecName: Full=tRNA-modifying protein ygfZ gi|36786864|emb|CAE15929.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 329 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%) Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 +T F+P L L G+ KGCY GQE+V+R ++R ++ + G+ S Sbjct: 205 STQFIPQAT----NLQALAGGVCFKKGCYTGQEMVARAKYRGANKRGMYWLAGS----AS 256 Query: 217 GSPILTDDIE 226 P+ DD+E Sbjct: 257 KIPMAGDDLE 266 >gi|208779174|ref|ZP_03246520.1| hypothetical protein FTG_1468 [Francisella novicida FTG] gi|208744974|gb|EDZ91272.1| hypothetical protein FTG_1468 [Francisella novicida FTG] Length = 248 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 34/216 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62 +N ++V G FLQ + TAD+ L + +LT +G+I+ + I Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDNDILLTAFANLKGRIISLCFVKFISN 62 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + +L +++ ++L+ L Y + S V P + L + + F N + + I Sbjct: 63 EKLLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLI 119 Query: 123 ADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG--- 177 +++ + N K+A+ IN + FLP A +DL N Sbjct: 120 SEMTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKV 160 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|238754568|ref|ZP_04615922.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473] gi|238707199|gb|EEP99562.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473] Length = 311 Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 146 ELRINHGIVD-PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 E+ ++D PN+ + P + L GI TKGCY GQE+V+R ++R ++ Sbjct: 175 EIEAGFPVIDSPNS----AQFIPQATNIQALAGICFTKGCYTGQEMVARAKYRGANKRAL 230 Query: 205 MIITG-TDDLPPSGSPI 220 + G + +P +G + Sbjct: 231 YWLAGQAERVPEAGEDL 247 >gi|296104560|ref|YP_003614706.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059019|gb|ADF63757.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 326 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 37/250 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G A +LQ +TADV + +A P+GK+ + + Sbjct: 19 LTLISLDDWALATLVGADAEKYLQGQVTADVSQMTEHQHLLAAHCDPKGKMWSNLRLFR- 77 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSN-- 112 +D F RS RD + +L Y + S V I + + G ++ F+ Sbjct: 78 RQDGFAFIERRSLRDDQLKELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFNELP 137 Query: 113 -----------SSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 +S + ERF + A+ + G E ++ + + L I Sbjct: 138 DAEKQLVSEGETSILWFEHPAERFLLVTDAATAERVTEALRG--EAQFNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ P D S F P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGL--PVIDAANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAG 253 Query: 210 -TDDLPPSGS 218 +P +G Sbjct: 254 HASRVPEAGE 263 >gi|145589151|ref|YP_001155748.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047557|gb|ABP34184.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 336 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 59/243 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK----IARGS------AILTPQGKILL-- 53 L I V G A FLQ+ ++ +L + IA+ S +P+G+++ Sbjct: 22 LPQWGMIFVEGPDATSFLQSQLSNSLLGMKRTHDPDIAKSSDSVRLVGYCSPKGRLISSA 81 Query: 54 ---YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHT 109 F S+ +D ++L I + + +L Y LRS V +I++ WN Sbjct: 82 WIGLFPTSESSDDRYVLFISKDIAATTAKRLAMYVLRSKVKVIDMSS------EWNVSGF 135 Query: 110 F-------------SNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144 F S + E R+ IA + +T I + Sbjct: 136 FDAAIHDGCEHLKTSQDCLVAEIPNVLVQGLTYTRYLIAKLGNEKT---EPPFEGGIDAW 192 Query: 145 HELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 ++L + I + F+P I + + G+ KGCY GQE+V+R Q+R I Sbjct: 193 NDLEVLSAIPRIVLATQEQFVPQMIN-----FESVAGVDFKKGCYPGQEIVARSQYRGAI 247 Query: 201 RKR 203 ++R Sbjct: 248 KRR 250 >gi|261211566|ref|ZP_05925854.1| glycine cleavage T-protein [Vibrio sp. RC341] gi|260839521|gb|EEX66147.1| glycine cleavage T-protein [Vibrio sp. RC341] Length = 323 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + ++GIS +KGCY GQE V+R ++R I ++ I+ G Sbjct: 204 PQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGN 247 >gi|300722120|ref|YP_003711402.1| hypothetical protein XNC1_1126 [Xenorhabdus nematophila ATCC 19061] gi|297628619|emb|CBJ89197.1| putative enzyme [Xenorhabdus nematophila ATCC 19061] Length = 333 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--LMDLLNGISLTKGCYIGQEVVSRIQH 196 +D + + L I G P D S F A L + N IS KGCY GQE+V+R + Sbjct: 187 NDSQQWLALEIEAGF--PVIDAAGSAQFIPQATNLQAIENSISFKKGCYAGQEMVARAKF 244 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 R ++ + G S P+ DD+E Sbjct: 245 RGANKRAMYWLAGQ----ASSLPVAGDDLE 270 >gi|71279144|ref|YP_270787.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H] gi|118577992|sp|Q47WN5|YGFZ_COLP3 RecName: Full=tRNA-modifying protein ygfZ gi|71144884|gb|AAZ25357.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H] Length = 324 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 22/30 (73%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 P + +NGIS TKGCY+GQE V+R+Q+ Sbjct: 208 PQMLNLQAINGISFTKGCYLGQETVARMQY 237 >gi|330957818|gb|EGH58078.1| hypothetical protein PMA4326_04469 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 293 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%) Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++R G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R Sbjct: 156 QIRAGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210 Query: 204 PMIIT-GTDDLPPSGSPILT 222 +T ++P G+ + + Sbjct: 211 LYRLTLQAQEIPQPGTALFS 230 >gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315442670|ref|YP_004075549.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] gi|145214716|gb|ABP44120.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315260973|gb|ADT97714.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] Length = 367 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ N+ + M++ G D P G P+L +G L Sbjct: 242 VGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLVHLDGDGDRPSPGDPLLAGGRAVGRL 299 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHG-VRVKASF 268 G VV + + V + ALT G V+V A+ Sbjct: 300 GTVVDHVDEGVIALALVKRGLPVDTALTTGGEVQVAAAI 338 >gi|148657807|ref|YP_001278012.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus sp. RS-1] gi|148569917|gb|ABQ92062.1| aminomethyltransferase [Roseiflexus sp. RS-1] Length = 324 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 24/30 (80%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LL+ +S +KGCY+GQE+++R++ R + KR Sbjct: 223 LLDAVSFSKGCYVGQEIIARMESRGRLAKR 252 >gi|47168424|pdb|1NRK|A Chain A, Ygfz Protein Length = 328 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDI 225 P + L GIS KGCY GQE V+R + R ++ ++ G+ LP +G +D+ Sbjct: 214 PQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGSASRLPEAG-----EDL 268 Query: 226 EI 227 E+ Sbjct: 269 EL 270 >gi|71907821|ref|YP_285408.1| glycine cleavage T protein (aminomethyl transferase) [Dechloromonas aromatica RCB] gi|71847442|gb|AAZ46938.1| Glycine cleavage T protein (aminomethyl transferase) [Dechloromonas aromatica RCB] Length = 339 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L++ I+ G+ A FL + T+D+ LP +A+ + T +G++ FL+ + +E Sbjct: 43 VPLTHLGLIEATGEDAKAFLHSQFTSDINHLPENLAQHAGWCTAKGRMQASFLVWRHDE- 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV 90 ++L + +++ +LL + LRS V Sbjct: 102 RYLLALSADLQEATQKRLLMFVLRSKV 128 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 P A + + G+S KGCY GQEVV+R Q+ +++ Sbjct: 231 PQMADFEKIGGVSFHKGCYPGQEVVARTQYLGKVKR 266 >gi|52696236|pdb|1VLY|A Chain A, Crystal Structure Of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli At 1.30 A Resolution Length = 338 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDI 225 P + L GIS KGCY GQE V+R + R ++ ++ G+ LP +G +D+ Sbjct: 223 PQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGSASRLPEAG-----EDL 277 Query: 226 EI 227 E+ Sbjct: 278 EL 279 >gi|120555181|ref|YP_959532.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter aquaeolei VT8] gi|120325030|gb|ABM19345.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter aquaeolei VT8] Length = 326 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 54/279 (19%), Positives = 109/279 (39%), Gaps = 43/279 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L+++ ++ G F+Q + +V + + +A TP+G+ + + ED Sbjct: 18 AHLTDRVLARISGPGTDKFVQGQFSQNVDEVTSGQSLRAAACTPKGRAYCITRLVRDGED 77 Query: 64 TFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 +L ++R + + L + ++ S +++ I G++ E + + Sbjct: 78 -LLLSLERETAEDTVKHLNKYLMLFRGTSLGVLDSGRITGLL---GIETARQVAGAATDE 133 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST--------------- 164 + +L G+ ++ D + H R D D LPS+ Sbjct: 134 LTRPGQVLSTDNGYLIRVEDD--SDHCARFELWQTDAQPDLLPSSELSLQTWLASEVRAG 191 Query: 165 -----------IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 P + L GI KGCY GQEV++R+ ++K + GT+ Sbjct: 192 VPWLTAATREAYVPQMLNLQHLQGIHFKKGCYTGQEVIARMHFLGQLKKSLFRVAFNGTE 251 Query: 212 DLPPSGSPILTDDIEIGTL--GVVVGKKA---LAIARID 245 P G+ ++ D +G + V+ G++ LA+ R D Sbjct: 252 AAPQPGTRLIADGSAVGEVVNSVLTGEQQGEMLAVIRHD 290 >gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium intracellulare ATCC 13950] Length = 364 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233 + L KGCY GQE V+R+ N+ R M++ G+ + P +G P+L +G LG V Sbjct: 245 VHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVERPSTGDPVLAGGRAVGRLGTV 302 Query: 234 V 234 V Sbjct: 303 V 303 >gi|294634850|ref|ZP_06713372.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685] gi|291091723|gb|EFE24284.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685] Length = 344 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%) Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 SD + L I G+ + ++D FLP I + L GI KGCY GQE+V+R Sbjct: 199 SDGAQWLALDIEAGLAIIDEASSDQFLPQAIN-----LQALGGICFNKGCYSGQEMVARA 253 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + R R+ + G+ P S +D+E+ Sbjct: 254 KFRGANRRALFWLRGSAGRLPHAS----EDLEL 282 >gi|312881728|ref|ZP_07741505.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus ATCC BAA-2122] gi|309370618|gb|EFP98093.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus ATCC BAA-2122] Length = 322 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 P + L+GIS TKGCY GQE V+R ++R ++ ++ G Sbjct: 204 PQALNLHALDGISFTKGCYTGQETVARAKYRGTNKRSLALLHG 246 >gi|52841809|ref|YP_095608.1| glycine cleavage T protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628920|gb|AAU27661.1| glycine cleavage T protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 352 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTTY-----VSFDKGCYKGQEIIARTHYRA 273 Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230 ++ + +D+ SG + D E+G L Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDENTEVGEL 308 >gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] Length = 341 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 13/74 (17%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGV 232 + L KGCY GQE VSR+ + + + P ++ G+ LP +G P++ +G +G Sbjct: 227 VHLDKGCYRGQETVSRVHN---VGRSPRVLVMLQLDGSATLPETGDPVMMGKRAVGRVGT 283 Query: 233 VV-----GKKALAI 241 VV G ALA+ Sbjct: 284 VVQHADYGPIALAL 297 >gi|54294377|ref|YP_126792.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens] gi|53754209|emb|CAH15686.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens] Length = 352 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTTY-----VSFDKGCYKGQEIIARTHYRA 273 Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230 ++ + +D+ SG + D E+G L Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDENTEVGEL 308 >gi|225874893|ref|YP_002756352.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196] gi|225791236|gb|ACO31326.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196] Length = 371 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%) Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ DF P + +D + KGCY+GQE+V RI+ R + ++ + Sbjct: 222 LRLLEGVPQYGVDF-SEKYLPQE--VDGSRPLHFNKGCYLGQEIVERIRSRATVHRQLRV 278 Query: 207 ITGTDDLPPSGSPILTDDIE-IGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 + T LP +P+ + + IG + G + L +A + + A+++ LT G Sbjct: 279 VELTGTLPALPAPVEVGEAQAIGEITSAAALPGGPRLLGLAMLR--NEAMERQQTLTYEG 336 >gi|154283223|ref|XP_001542407.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410587|gb|EDN05975.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 162 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 15/29 (51%), Positives = 19/29 (65%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + GI KGCY GQE+ R HR ++RKR Sbjct: 1 MGGIDFHKGCYTGQELTIRTHHRGVVRKR 29 >gi|315127408|ref|YP_004069411.1| one-carbon metabolism transcriptional regulator [Pseudoalteromonas sp. SM9913] gi|315015922|gb|ADT69260.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas sp. SM9913] Length = 303 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P + +NGIS KGCY GQE V+R+++ ++ I+TG + Sbjct: 186 PQMVNLQAINGISFKKGCYTGQETVARMKYLGKNKRAMYIVTGQSE 231 >gi|224044546|ref|XP_002192842.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 212 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 15/107 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-------ILTPQGKIL-- 52 ++ + ++ + V G A FLQ ++T DV L +A G A L QG+ L Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRL---LAEGDAPRALYAHALNAQGRCLYD 79 Query: 53 --LYFL-ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP 96 LY L S EE +LE D S DS+ L YK+R V I P Sbjct: 80 VILYRLHRSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCP 126 >gi|319410530|emb|CBY90895.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594] Length = 288 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + + Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFS---NSSFIDERFSIADVL 126 ++ + +L + LR+ V+ EI V L + E + N +F ++ S Sbjct: 71 DLLEATVKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPNLAFAAQQDSDGICS 130 Query: 127 LHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + G +IA + HE+R + + T A+ + Sbjct: 131 IALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 182 Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240 >gi|146306495|ref|YP_001186960.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp] gi|145574696|gb|ABP84228.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp] Length = 313 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 44/279 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + V G A FLQ +T ++ L A TP+G++L F I +E D + Sbjct: 10 LDHEGLLAVRGPDAGKFLQGQLTCNLSYLSASQTSLGARCTPKGRMLSSFRIVPVE-DGY 68 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------QEHTFSNSSFIDER 119 +L + R + + L Y + S + + V + E D Sbjct: 69 LLAMARELIEPQLADLQKYAVFSKSKLGDESAAWVRFGLSGGDAVLSELGLVPGDHADAL 128 Query: 120 FSIADVLLHRTW-GHNEKIASDIKTYH--------------------ELRINHGIVDPNT 158 S +L R G E A+ K H ++R G V T Sbjct: 129 ASAEGLLAVRLGDGRVELWAAVDKAEHLHAVLSRHLPQAPLNLWLLAQVRAGVGQVFGAT 188 Query: 159 D--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDLPP 215 F+P I + L G+S KGCY GQE+V+R+Q+ + R+ + G ++P Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLRLGGTEVPS 243 Query: 216 SGSPILTDDIEIGTLGVVV-------GKKALAIARIDKV 247 +G+ + + + ++G VV G + LA+ + D V Sbjct: 244 AGTELFS-PVHASSVGEVVLAAQAEDGVELLAVLQEDAV 281 >gi|251771531|gb|EES52108.1| putative aminomethyltransferase [Leptospirillum ferrodiazotrophum] Length = 339 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 84/238 (35%), Gaps = 48/238 (20%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G FLQ ++ DV R L+P+ +IL I + + + Sbjct: 25 LVSVSGDDRASFLQGLLCQDVAGQKTGTLRYGFFLSPKARILFDSWIGVLPDRILLSPSL 84 Query: 71 RSKRD-----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 SK D + + K LF++ ++ + E L + + F E Sbjct: 85 FSKEDEEAFLAHLKKYLFFRTKATLSSETGAFISASLVGPEALALATPLFDPEAEEEGVR 144 Query: 119 RFSIADVLLHRT---------------WGHNEKIASDIKTYHE----------------- 146 R S R W EK +K E Sbjct: 145 RLSEGGFAFLRPGIGAFDADTGGWIDLWLPAEKAGDRLKGLEERVLSRGGQRLDDTGIEV 204 Query: 147 LRINHGIVDPNTDF-LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R+ GI P F L + FP +A +D L +S KGCY+GQE V+R++ + + ++ Sbjct: 205 YRVERGI--PAVPFELNESHFPAEAGLDTL-AVSYNKGCYVGQEPVTRLKFQGQLSRK 259 >gi|56478511|ref|YP_160100.1| putative glycine cleavage T-protein (aminomethyl transferase) [Aromatoleum aromaticum EbN1] gi|56314554|emb|CAI09199.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Aromatoleum aromaticum EbN1] Length = 351 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTDDLP 214 +++ G+S KGCY GQE+V+R Q+ ++KR I G + LP Sbjct: 243 EIIGGVSFQKGCYPGQEIVARTQYLGKLKKRMYRVRIADGAEPLP 287 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N I+ G+ + PFL + + DV L + A+ ++ +P+G++L L+ K E D Sbjct: 48 VPLVNLGIIRSRGEDSAPFLHNLFSNDVKNLSAEGAQWTSFNSPKGRMLASILLWK-EAD 106 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV 90 L + +L+ KL Y LRS V Sbjct: 107 GHALVMSADLLPALLKKLSMYVLRSKV 133 >gi|21672687|ref|NP_660754.1| hypothetical protein BUsg420 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091589|sp|Q8K9C6|YGFZ_BUCAP RecName: Full=tRNA-modifying protein ygfZ gi|21623327|gb|AAM67965.1| unknown protein from 2d-page (spot pr51) [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 319 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 153 IVDPNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 I+D T FLP +I + LL +S KGCY GQE ++R+ ++N+ + +++ Sbjct: 200 IIDKQTSQKFLPQSI-----NLILLQAVSFDKGCYYGQETIARVFYKNLNKYSLYLLSSK 254 Query: 211 DDLPPSGSPIL 221 ++ P I+ Sbjct: 255 GNINPKIGSII 265 >gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M] gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 363 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230 + + L KGCY GQE V+R+ N+ + M++ G+ D P +G +L +G + Sbjct: 241 IGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGSTDRPSTGDSVLAGGRSVGRV 298 Query: 231 GVVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269 G VV G ALA + R D A+ G T+ + S P Sbjct: 299 GTVVDHVDLGPVALALVKRGLPADTALMTGAEATIPALIDAQSLP 343 >gi|307610278|emb|CBW99842.1| hypothetical protein LPW_16031 [Legionella pneumophila 130b] Length = 352 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%) Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 273 Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230 ++ + +D+ SG + D E+G L Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKADENTEVGEL 308 >gi|296390892|ref|ZP_06880367.1| hypothetical protein PaerPAb_22175 [Pseudomonas aeruginosa PAb1] Length = 314 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|153870446|ref|ZP_01999846.1| Glycine cleavage T protein [Beggiatoa sp. PS] gi|152073082|gb|EDN70148.1| Glycine cleavage T protein [Beggiatoa sp. PS] Length = 123 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 26/42 (61%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + G+S KGCY GQE+V+R+Q+ +++R + + PP Sbjct: 18 IGGVSFKKGCYTGQEIVARMQYLGTLKRRMYLARINTNTPPQ 59 >gi|71064739|ref|YP_263466.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4] gi|71037724|gb|AAZ18032.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4] Length = 255 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 46/261 (17%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLIS 58 +++V L+ S + + G+ A FLQ +T +V L L Y+ A AI +G+I I Sbjct: 5 INAVTLAQFSQLSIQGEDAEKFLQGQLTCNVTKLGLSYQAA---AIGNLKGRIEFGIWIK 61 Query: 59 KIEEDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNS 113 K E + + I ++L L F K ++ + I P + V +++ + ++ S Sbjct: 62 KQAEKHYDVVISTDCAEALQGHLKKFGAFSKFDTSTPMPIYPCVIDNVPTFSHQDDYNTS 121 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT-DFLPSTIFPHDALM 172 I + W + S I T N+ IV +F P + H Sbjct: 122 ENI------------QAW-----MQSSIATG-----NYWIVAATQGEFQPQELRLHQ--- 156 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRK-----RPMIITGTDDLPPSGSPILTDDIE- 226 G+ KGCY+GQEV++RI ++ + + + G+ P +G + D ++ Sbjct: 157 --RGGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPAAGEKL--DKVQV 212 Query: 227 IGTLGVVVGKKALAIARIDKV 247 + + G +AL +AR +++ Sbjct: 213 VNAITTSEGFEALVVARPEQL 233 >gi|254239121|ref|ZP_04932444.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254245013|ref|ZP_04938335.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126171052|gb|EAZ56563.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126198391|gb|EAZ62454.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 314 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|15595956|ref|NP_249450.1| hypothetical protein PA0759 [Pseudomonas aeruginosa PAO1] gi|9946647|gb|AAG04148.1|AE004511_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 314 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|219117237|ref|XP_002179413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409304|gb|EEC49236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 657 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207 L +S KGCY+GQE+ +R+ H +RKR P+++ Sbjct: 269 LQAVSFHKGCYLGQELTARVHHTGAVRKRILPLLL 303 >gi|107100219|ref|ZP_01364137.1| hypothetical protein PaerPA_01001242 [Pseudomonas aeruginosa PACS2] Length = 314 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_29246 [Mycobacterium kansasii ATCC 12478] Length = 363 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 51/283 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I + GK +L +I T V LP + + L QG++ +++ +++ + T+ Sbjct: 39 SHRAVITLTGKDRQTWLHSISTQHVSDLPEGASTENLSLDGQGRVEDHWIQTELADTTY- 97 Query: 67 LEIDRSKRDSLID---KLLFY------------------KLRSNVIIEIQPINGVVLSWN 105 L+ + + + L+ K++F+ +L ++++ ++ + S Sbjct: 98 LDTEPWRGEPLLSYLRKMVFWAAVTPEAADLAVLSLLGPRLADRAVLDVVGLD-ALPSEM 156 Query: 106 QEHTFSNSSFIDERFSIA-----DVLLHRT----WGHNEKIA----SDIKTYHELRINHG 152 + F+ + A D+L+ R W H A + + TY R+ Sbjct: 157 AAVPLAGGGFVRRMPAPAGQIELDLLVPREDCADWQHRLTQAGVRPAGVWTYEAHRVAAR 216 Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-- 207 D TI PH+ L + L KGCY GQE V+R+ N+ + M++ Sbjct: 217 RPRLGVDTDERTI-PHEVGWIGGPGLGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLL 273 Query: 208 --TGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 G+ D P +G ++ +G +G VV G ALA+ + Sbjct: 274 HLDGSGDRPSTGDAVMAGGRAVGRVGTVVEHVDLGPVALALVK 316 >gi|218893298|ref|YP_002442167.1| hypothetical protein PLES_45841 [Pseudomonas aeruginosa LESB58] gi|218773526|emb|CAW29338.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 314 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218 F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+ Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246 Query: 219 PILT 222 + + Sbjct: 247 GLFS 250 >gi|146281603|ref|YP_001171756.1| aminomethyltransferase [Pseudomonas stutzeri A1501] gi|145569808|gb|ABP78914.1| predicted aminomethyltransferase [Pseudomonas stutzeri A1501] Length = 261 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I + L G+S KGCY GQE+V+R+Q+ +++R Sbjct: 138 FIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRR 176 >gi|299115744|emb|CBN74309.1| folate-binding protein YgfZ [Ectocarpus siliculosus] Length = 544 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +A+ + + LRI G P + L + P +A L + + KGCYIGQE +SR+ Sbjct: 342 VAAGEEEWQTLRIKQGFPFPGKE-LTADYNPLEA--GLWHAVHFDKGCYIGQESISRVNA 398 Query: 197 RNIIRKRPMIITGTDDLPP 215 N + K ++ D P Sbjct: 399 YNAVSKALYGVSFEDSTSP 417 >gi|262183527|ref|ZP_06042948.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] Length = 318 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 38/275 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF Sbjct: 16 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 74 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 L++ ++ +SL D L S V +E + V+ Q +++ ++ Sbjct: 75 LDVPTAQFESLRDFLTAMVFWSQVTVE-EADAAVITVLGQPLQKPSAALVERSVQWPGCP 133 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINH----GIVDPNT--DFLPSTI 165 + F + L EK + T +R G +D T +P I Sbjct: 134 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDLDEKTIAHEVPQWI 193 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPI 220 +D D+ + L KGCY GQE V+R++ N+ R +++ + P SG+ I Sbjct: 194 RRND---DVPAFVHLEKGCYRGQETVARVE--NLGRSPRLLVMLYLDGSAPERPDSGADI 248 Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G LG VV G AL + + ++H Sbjct: 249 TLGGRRVGRLGTVVEDCDYGPIALGLIKRSALNHG 283 >gi|326563032|gb|EGE13306.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 103P14B1] gi|326577301|gb|EGE27189.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 101P30B1] Length = 233 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 13/83 (15%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P + + G++ KGCY+GQE+++R+ + + I G +PP+G + Sbjct: 135 PQELRLHQKGGVAYDKGCYLGQEIIARLYFKARPKAYLHRILGVGAIPPTGG-------D 187 Query: 227 IGTLGVV------VGKKALAIAR 243 +G + VV G +AL IAR Sbjct: 188 MGRMSVVNAIATDTGFEALVIAR 210 >gi|134302296|ref|YP_001122265.1| putative aminomethyl transferase [Francisella tularensis subsp. tularensis WY96-3418] gi|134050073|gb|ABO47144.1| putative aminomethyl transferase [Francisella tularensis subsp. tularensis WY96-3418] Length = 248 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 30/214 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P + L + + F N + + ++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121 Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179 + + N K+A+ IN + FLP A +DL N + Sbjct: 122 MTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|227833984|ref|YP_002835691.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] gi|227455000|gb|ACP33753.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] Length = 353 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 38/275 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF Sbjct: 51 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 L++ ++ +SL D L S V +E + V+ Q +++ ++ Sbjct: 110 LDVPTAQFESLRDFLTAMVFWSQVTVE-EADAAVITVLGQPLQKPSAALVERSVQWPGCP 168 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINH----GIVDPNT--DFLPSTI 165 + F + L EK + T +R G +D T +P I Sbjct: 169 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDLDEKTIAHEVPQWI 228 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPI 220 +D D+ + L KGCY GQE V+R++ N+ R +++ + P SG+ I Sbjct: 229 RRND---DVPAFVHLEKGCYRGQETVARVE--NLGRSPRLLVMLYLDGSAPERPDSGADI 283 Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G LG VV G AL + + ++H Sbjct: 284 TLGGRRVGRLGTVVEDCDYGPIALGLIKRSALNHG 318 >gi|76800870|ref|YP_325878.1| aminomethyltransferase, glycin cleavage system T protein [Natronomonas pharaonis DSM 2160] gi|76556735|emb|CAI48309.1| homolog to aminomethyltransferase, glycin cleavage system T protein [Natronomonas pharaonis DSM 2160] Length = 360 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ L N + KGCY+GQEVVS+I+++ R ++ D P +G+ + D +G + Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSKIENQG-RPSRELVGIKLDAEPTAGAAVFDGDSHVGEV 302 >gi|113478071|ref|YP_724132.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium erythraeum IMS101] gi|110169119|gb|ABG53659.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium erythraeum IMS101] Length = 349 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P+ + L P +A L N IS KGCYIGQE ++R+ ++ Sbjct: 216 RLWQQLRIEQGRPAPDYE-LTDDYNPLEA--GLWNTISFEKGCYIGQETIARLNTYKGVK 272 Query: 202 KR 203 +R Sbjct: 273 QR 274 >gi|297837379|ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata] gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata subsp. lyrata] Length = 423 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + +LRI G P + ++ L L N ISL KGCY GQE ++R+ + I+ Sbjct: 283 AWEKLRITQGRPAPERELSKE----YNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIK 338 Query: 202 KRPMIITGTDDLPPS--GSPILTDDIEIGTL 230 + + G + P+ GSPI+ D ++G L Sbjct: 339 Q---WLCGLNLSAPAEPGSPIIVDGKKVGKL 366 >gi|221135433|ref|ZP_03561736.1| glycine cleavage T protein (aminomethyl transferase) [Glaciecola sp. HTCC2999] Length = 296 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 11/202 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L + IK+ G + ++Q +T ++ TL + A +GK+ +F S +D Sbjct: 10 AHLPHLGIIKITGTDKVKYIQGQVTCNIETLNSERWTFGAHCDFKGKMWSFFQAS-FWDD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L + S + +L Y + S V I++ S + + + DE+ + Sbjct: 69 ALLLICPKDVIPSALSELKKYGVFSQVEIVDASNEFSFTGSGSDAGEYGQVTCTDEQLVL 128 Query: 123 A------DVLLH--RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + LH R N + + L I GI T + P + Sbjct: 129 SMSNQTITRALHVSRDSSANSDLPDGSAVWQALDIQSGI-GAITSSTSNEYVPQILNLQA 187 Query: 175 LNGISLTKGCYIGQEVVSRIQH 196 L+ I KGCY+GQEVV+R ++ Sbjct: 188 LDAIDFKKGCYMGQEVVARTKY 209 >gi|315503573|ref|YP_004082460.1| folate-binding protein ygfz [Micromonospora sp. L5] gi|315410192|gb|ADU08309.1| folate-binding protein YgfZ [Micromonospora sp. L5] Length = 369 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233 + L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G Sbjct: 275 VHLDKGCYRGQETVARVHNLGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTA 334 Query: 234 V-----GKKALAIARIDKVDHA 250 V G+ ALA+ + + D A Sbjct: 335 VQHYELGQVALAVLKRNTPDDA 356 >gi|302870150|ref|YP_003838787.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029] gi|302573009|gb|ADL49211.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029] Length = 369 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233 + L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G Sbjct: 275 VHLDKGCYRGQETVARVHNLGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTA 334 Query: 234 V-----GKKALAIARIDKVDHA 250 V G+ ALA+ + + D A Sbjct: 335 VQHYELGQVALAVLKRNTPDDA 356 >gi|332711903|ref|ZP_08431833.1| folate-binding protein YgfZ [Lyngbya majuscula 3L] gi|332349231|gb|EGJ28841.1| folate-binding protein YgfZ [Lyngbya majuscula 3L] Length = 355 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P + L P +A L IS +KGCYIGQE ++R+ ++ Sbjct: 219 RVWEQLRIQQGRPAPGHE-LTEDYNPLEA--GLWQSISFSKGCYIGQETIARLNTYKGVK 275 Query: 202 KR--PMIITGTDDLPPSGSPILTDDIEIGTL 230 +R + ++ DL GS I D ++G L Sbjct: 276 QRLWGIRLSAPTDL---GSVITVDGEKVGKL 303 >gi|325928378|ref|ZP_08189573.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118] gi|325541254|gb|EGD12801.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118] Length = 273 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 169 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRVLQLLETDAAVDAGDAVALDGSA 227 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266 IGT+ V G ALA+ ++ + G AL HG R +A Sbjct: 228 IGTVVSVAGNLALAVLPLELT---LDAGTALQAGTHGARPRA 266 >gi|284166725|ref|YP_003405004.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511] gi|284016380|gb|ADB62331.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511] Length = 375 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 9/60 (15%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-------GTDDLPPSGSPILTD 223 ++ L N + KGCY+GQEVVSR+++R ++ + +T G DD G+P + D Sbjct: 244 VLGLRNALDWEKGCYVGQEVVSRVENRGQPSRKLVGLTLEGAASDGEDD--EDGAPAVPD 301 >gi|56708171|ref|YP_170067.1| hypothetical protein FTT_1088c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670642|ref|YP_667199.1| hypothetical protein FTF1088c [Francisella tularensis subsp. tularensis FSC198] gi|224457273|ref|ZP_03665746.1| hypothetical protein FtultM_06160 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370655|ref|ZP_04986660.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874978|ref|ZP_05247688.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604663|emb|CAG45721.1| hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320975|emb|CAL09104.1| hypothetical protein FTF1088c [Francisella tularensis subsp. tularensis FSC198] gi|151568898|gb|EDN34552.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840977|gb|EET19413.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159384|gb|ADA78775.1| hypothetical protein NE061598_06270 [Francisella tularensis subsp. tularensis NE061598] Length = 248 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 30/214 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P + L + + F N + + ++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121 Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179 + + N K+A+ IN + FLP A +DL N + Sbjct: 122 MTFEQIQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|148549504|ref|YP_001269606.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida F1] gi|148513562|gb|ABQ80422.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida F1] Length = 313 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGT 210 ++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R + Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQ 238 Query: 211 DDLPPSGSPIL--TDDIEIGTLGVVVGKKA 238 +P G+ I T +G + + G A Sbjct: 239 QAIPAPGAEIFSPTHGSSVGEVVIAAGNGA 268 >gi|325275456|ref|ZP_08141386.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51] gi|324099407|gb|EGB97323.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51] Length = 313 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230 >gi|220913464|ref|YP_002488773.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6] gi|219860342|gb|ACL40684.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6] Length = 361 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 11/85 (12%) Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221 PH+ +DLL + L KGCY GQE ++R+ + +R + + LP +GS +L Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTLPAAGSVVL 288 Query: 222 TDDIEIGTLGVV-----VGKKALAI 241 D ++GT+ V +G ALA+ Sbjct: 289 AGDRKVGTVTSVAQHYEMGPVALAV 313 >gi|326560812|gb|EGE11178.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 46P47B1] Length = 233 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%) Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+ Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 ++R+ + + I G +P +G + I + L G +AL IAR Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPATGGDMGRMSI-VNALATDTGFEALVIAR 210 >gi|238061305|ref|ZP_04606014.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149] gi|237883116|gb|EEP71944.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149] Length = 370 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233 + L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G Sbjct: 275 VHLDKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTSDQPPAAGTPVTLDGRAVGFVGTA 334 Query: 234 V-----GKKALAIARIDKVDHA 250 V G+ ALA+ + + D A Sbjct: 335 VLHHELGQIALAVVKRNVPDDA 356 >gi|297627128|ref|YP_003688891.1| glycine cleavage T-protein, aminomethyl transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922893|emb|CBL57475.1| glycine cleavage T-protein, aminomethyl transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 349 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 22/108 (20%) Query: 134 NEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 N ++A + + R+ G+ +D + LP+ + L L KGCY GQE Sbjct: 196 NPRLAG-VWAWEAARVAAGVPRIGIDTDDKTLPNELG--------LYATELDKGCYTGQE 246 Query: 190 VVSRIQH-----RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLG 231 V+R+ + R ++R +++ G+ + LP G PIL D +G +G Sbjct: 247 TVARVHNVGRPPRRLVR---LLLDGSMNRLPAPGDPILLDGEPVGVVG 291 >gi|187931894|ref|YP_001891879.1| hypothetical protein FTM_1232 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712803|gb|ACD31100.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 248 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 40/218 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 7 NFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V P + L F+ + F++ D+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYAL------FFTKTGFLNH-----DI 112 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNT-------DFLPSTIFPHDALMDLLNG- 177 L T G + S++ T+ ++R + I T FLP A +DL N Sbjct: 113 L---TKGS---LTSEM-TFEQVRKENIINKLATINAANFEKFLP-------AELDLDNVD 158 Query: 178 --ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + TKGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 159 KVVCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|313500349|gb|ADR61715.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 313 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230 >gi|26988156|ref|NP_743581.1| hypothetical protein PP_1423 [Pseudomonas putida KT2440] gi|24982889|gb|AAN67045.1|AE016333_6 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 313 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230 >gi|167035381|ref|YP_001670612.1| folate-binding protein YgfZ [Pseudomonas putida GB-1] gi|166861869|gb|ABZ00277.1| folate-binding protein YgfZ [Pseudomonas putida GB-1] Length = 313 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 5/44 (11%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I + ++G+S KGCY GQE+V+R+Q+ +++R Sbjct: 192 FIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230 >gi|70919599|ref|XP_733451.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56505261|emb|CAH87045.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 205 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 25/39 (64%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 P D D N IS KGCYIGQEV++R +++ +I K + Sbjct: 149 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 187 >gi|104783273|ref|YP_609771.1| hypothetical protein PSEEN4300 [Pseudomonas entomophila L48] gi|95112260|emb|CAK16987.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 315 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 5/44 (11%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 F+P I + ++G+S KGCY GQE+V+R+Q+ +++R Sbjct: 194 FIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 232 >gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] gi|262084295|gb|ACY20263.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] Length = 389 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+ + +R +++ D P +G P++ +G LG Sbjct: 265 FGAVHLDKGCYRGQETVARVHNLGKSPRRLVLLHLDGSADGRPATGDPVVAGGRTVGRLG 324 Query: 232 VVV 234 VV Sbjct: 325 TVV 327 >gi|226943486|ref|YP_002798559.1| ygfZ-like protein [Azotobacter vinelandii DJ] gi|226718413|gb|ACO77584.1| ygfZ-like protein [Azotobacter vinelandii DJ] Length = 315 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%) Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPSTIFPHDALMDLLNGISL 180 A+ L R GH + + ++R G V T F+P I + + G+S Sbjct: 155 AEALHTRLAGHLPEAPLESWLLAQIRAGIGQVYGATRELFIPQMIN-----LQAVGGVSF 209 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203 KGCY GQE+V+R+Q+ +++R Sbjct: 210 KKGCYSGQEIVARMQYLGKLKRR 232 >gi|53802555|ref|YP_112775.1| hypothetical protein MCA0240 [Methylococcus capsulatus str. Bath] gi|53756316|gb|AAU90607.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 356 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 24/32 (75%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++ L G+S KGCY GQEV++R+ +R ++++ Sbjct: 241 LEALGGLSYKKGCYPGQEVIARLHYRGQLKRK 272 >gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] Length = 349 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVV 234 + L KGCY GQE ++R+ + +R +++ D P +G P+ D +G LG VV Sbjct: 233 VHLDKGCYRGQETIARVHNIGRPPRRLVLLHLDGSADATPATGDPVTVDGRTVGRLGTVV 292 >gi|296112437|ref|YP_003626375.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis RH4] gi|295920131|gb|ADG60482.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis RH4] gi|326567016|gb|EGE17139.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 12P80B1] gi|326569580|gb|EGE19634.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC8] gi|326572353|gb|EGE22346.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC7] gi|326577879|gb|EGE27744.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis O35E] Length = 233 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%) Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+ Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 ++R+ + + I G +P +G + I + L G +AL IAR Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPATGGDMGRMSI-VNALATDTGFEALVIAR 210 >gi|255577330|ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis] gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative [Ricinus communis] Length = 433 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + +LRI GI P + L + +A L N ISL KGCY GQE ++R+ + ++ Sbjct: 292 NAWEKLRIIQGIPAPGKE-LTNEFNVLEA--GLWNSISLNKGCYKGQETIARLITYDGVK 348 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R I + P GS I D I++G L Sbjct: 349 QRLWGIHLSAPAEP-GSLITVDGIKVGKL 376 >gi|67922627|ref|ZP_00516133.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera watsonii WH 8501] gi|67855555|gb|EAM50808.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera watsonii WH 8501] Length = 353 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P+ + L P + L + IS KGCYIGQE ++R+ ++ Sbjct: 220 RVWEQLRIKQGRPYPDQE-LTENYNPLET--GLWSTISFDKGCYIGQETIARLNTYQGVK 276 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +R + ++ +G+ + DD ++G L Sbjct: 277 QRLWGVKLNQEV-KAGNTVTLDDKKVGIL 304 >gi|109899465|ref|YP_662720.1| glycine cleavage T protein (aminomethyl transferase) [Pseudoalteromonas atlantica T6c] gi|109701746|gb|ABG41666.1| glycine cleavage T protein (aminomethyl transferase) [Pseudoalteromonas atlantica T6c] Length = 319 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 35/128 (27%) Query: 98 NGVVLSWNQEHTFSNSSFIDERFSI-------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 NGVVL+ E ++RF + A + H T + +K ++ L I Sbjct: 144 NGVVLALGSE---------NKRFMLVLTPEGQAHLAAHETLTYADKTLWEV-----LDIK 189 Query: 151 HGIVDPNT----DFLPSTIFPHDALMDL--LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ + T +F+P +M+L L+GIS +KGCY+GQEVV+R + KR Sbjct: 190 AGVAELRTATSNEFVPQ-------MMNLQALDGISFSKGCYMGQEVVARTKFLG-KNKRA 241 Query: 205 MIITGTDD 212 I D+ Sbjct: 242 AFILKADE 249 >gi|288818695|ref|YP_003433043.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6] gi|288788095|dbj|BAI69842.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6] gi|308752283|gb|ADO45766.1| folate-binding protein YgfZ [Hydrogenobacter thermophilus TK-6] Length = 300 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK 236 ISLTKGCY+GQE ++R+ +R + P ++ + G I + +IG + V + Sbjct: 210 ISLTKGCYVGQEAIARVYYRG---RTPRVLAKFEARNVREGDKIKEGEKDIGIITSVNSR 266 Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRV 264 LA+ I + I + + T VR+ Sbjct: 267 GDLALGYILRAKANIGEVLPCTAGEVRL 294 >gi|126661608|ref|ZP_01732637.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece sp. CCY0110] gi|126617105|gb|EAZ87945.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece sp. CCY0110] Length = 212 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P+ + L P +A L + IS KGCYIGQE ++R+ +++R Sbjct: 78 WQQLRIKQGRPYPDQE-LTEDYNPLEA--GLWSTISFDKGCYIGQETIARLNTYQGVKQR 134 Query: 204 PMIITGTDDLPP--SGSPILTDDIEIGTL 230 + G P +G I DD ++G L Sbjct: 135 ---LWGVKLNQPVQTGHTITVDDKKVGIL 160 >gi|222478769|ref|YP_002565006.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239] gi|222451671|gb|ACM55936.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239] Length = 386 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 25/100 (25%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR------------PMIITGTDD------ 212 ++ L N + KGCY+GQEVVSR++++ +R I G D Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSRVENQGRPSRRLIGLDLDGLADATADIDGDADPEGYDE 303 Query: 213 -LPPSGSPILTDDIEIG-----TLGVVVGKK-ALAIARID 245 LP G+ + D +G +G G ALA AR D Sbjct: 304 ILPSPGAAVFDGDEAVGEVTRAAVGPAAGDPIALAFARFD 343 >gi|237653170|ref|YP_002889484.1| folate-binding protein YgfZ [Thauera sp. MZ1T] gi|237624417|gb|ACR01107.1| folate-binding protein YgfZ [Thauera sp. MZ1T] Length = 345 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 +L+ G+ KGCY GQE+V+R Q+ ++KR Sbjct: 237 ELIGGVDFHKGCYPGQEIVARTQYLGKLKKR 267 >gi|254372745|ref|ZP_04988234.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570472|gb|EDN36126.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 248 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 26/212 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +N ++V G FLQ + TAD+ L++ I +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 +L +++ ++L+ L Y + S V P + L + + F N + + ++ Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---ISLT 181 + + E I + + T IN + FLP A +DL N + T Sbjct: 122 MTFEQV--QKENIINKLAT-----INAANFEK---FLP-------AELDLDNVDKVVCYT 164 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 KGCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 165 KGCYMGQEVIARMHYKAKLKKELAVVKSQVDI 196 >gi|163848163|ref|YP_001636207.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl] gi|222526066|ref|YP_002570537.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl] gi|163669452|gb|ABY35818.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl] gi|222449945|gb|ACM54211.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl] Length = 329 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%) Query: 140 DIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 D T +RI HG + D++P DL +S KGCY+GQE+++R++ Sbjct: 190 DSHTAEVVRIEHGYPRFKHEITLDYIPLE-------ADLWRAVSFQKGCYVGQEIIARME 242 Query: 196 HRNIIRK 202 R I K Sbjct: 243 SRGRIAK 249 >gi|283779736|ref|YP_003370491.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068] gi|283438189|gb|ADB16631.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068] Length = 327 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMIITGTDDLPPSGSPI 220 + P + D L IS KGCY+GQE V+RI H N + + + + G + PP+G+P+ Sbjct: 217 STLPQEMNRDTL-AISFKKGCYLGQETVARIDALGHVNRVLTK-LSLPG-EIAPPTGTPL 273 Query: 221 LTDDIEIGT 229 + D E GT Sbjct: 274 VMRD-ETGT 281 >gi|77359673|ref|YP_339248.1| transcriptional regulator [Pseudoalteromonas haloplanktis TAC125] gi|76874584|emb|CAI85805.1| putative one-carbon metabolism transcriptional regulator, COG 354, highly conserved in phylogeny [Pseudoalteromonas haloplanktis TAC125] Length = 303 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P + ++GIS KGCY GQE V+R+++ ++ I++G D Sbjct: 186 PQMVNLQAIDGISFKKGCYAGQETVARMKYLGKNKRAMYIVSGQSD 231 >gi|82753086|ref|XP_727534.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23483427|gb|EAA19099.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 346 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 25/39 (64%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 P D D N IS KGCYIGQEV++R +++ +I K + Sbjct: 209 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 247 >gi|225166049|ref|ZP_03727792.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2] gi|224799709|gb|EEG18195.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2] Length = 321 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKI 60 S++ + +++ G+ A FLQ I+ + TLP G L +GK++ K+ Sbjct: 13 SAITQKTTAVLRLTGEDASSFLQGQISQETRTTLPQPAIYG-LFLNHKGKVIADAYALKV 71 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFIDE 118 + + L + S + L L + + +V IE + + + L+ E S S+ I + Sbjct: 72 SDAEWWLWSEASPANVLAHHLESFIVADDVTIEDRSGDWTLTTLAGPSEAAASLSALIGQ 131 Query: 119 RFSIADVL--------------LHRTWGHNEKIAS----------DIKTYHELRINHGIV 154 A L +W A+ D RI GI Sbjct: 132 PLPEAGAYARVGEGFMFRGRRGLGDSWKWLAPAAAQPTLDGWTPPDPMLMERARIEAGIP 191 Query: 155 DPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQ 195 D P + PH+ + + IS TKGCY+GQE+++R++ Sbjct: 192 RVPVDIGPGDL-PHEGGPEFVAASISYTKGCYLGQEIMARLK 232 >gi|330470354|ref|YP_004408097.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032] gi|328813325|gb|AEB47497.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032] Length = 370 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 10/94 (10%) Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224 A +DL+ + L KGCY GQE V+R+ + +R +++ TD LP +G+P+ Sbjct: 266 AEVDLIAPAVHLDKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDQLPVAGTPVDLAG 325 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253 +G +G V G+ ALA+ + D A+ + Sbjct: 326 RTVGFVGTAVHHHELGQVALAVIKRSVPDDAVLR 359 >gi|254446453|ref|ZP_05059929.1| Glycine cleavage T-protein C-terminal barrel domain [Verrucomicrobiae bacterium DG1235] gi|198260761|gb|EDY85069.1| Glycine cleavage T-protein C-terminal barrel domain [Verrucomicrobiae bacterium DG1235] Length = 278 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 14/131 (10%) Query: 98 NGVVLSWNQEHTFSNSSFI------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 NG++ W + + F+ +R I D L R G E D + L I Sbjct: 98 NGLIAFWGKRGSEGALEFLALTEEGRDRIEIVDAGL-RDIGSEEL---DREAMSFLAIEA 153 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--G 209 + + F S + P + ++ + +S KGCY+GQEV++R+ +RKR + I+ G Sbjct: 154 KVPEIGLGFGDSDL-PQELGLER-DAVSFNKGCYLGQEVMARLHAMGRVRKRLVRISIEG 211 Query: 210 TDDLPPSGSPI 220 + + P PI Sbjct: 212 PNTIAPGDLPI 222 >gi|116626954|ref|YP_829110.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Solibacter usitatus Ellin6076] gi|116230116|gb|ABJ88825.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Solibacter usitatus Ellin6076] Length = 289 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 45/234 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI---LLYFLISKIEE 62 LS + I V G+ L AI + +V + + +L+PQG+I L F E Sbjct: 17 LSKRGRIAVRGRDRARLLHAITSNEVKKMTPGSGCYAFLLSPQGRIQADLNLFCF----E 72 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 D F+++ + R+ ++ + Y + V E++ ++ + E Sbjct: 73 DRFLIDTEPELREKVLPHIKKYIIADQV--ELEDVSAETAAIGLEGPSAATILATLGAPV 130 Query: 110 ----FSNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHEL-------------RI 149 +S+ ++ D + V R + EK A+ ++ + RI Sbjct: 131 PGTDYSHVAWDDATIAAVTVTGQPGVRIFCPLEKAAAFVRQFESAGAMAASEDDVRLARI 190 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 +G D + T P + ++ +S TKGCYIGQE+V RI+ + + K+ Sbjct: 191 ENGRPRYGED-IRDTSLPQETQQ--MHAVSFTKGCYIGQEIVERIRAQGRVNKK 241 >gi|28493623|ref|NP_787784.1| hypothetical protein TWT656 [Tropheryma whipplei str. Twist] gi|28476665|gb|AAO44753.1| unknown [Tropheryma whipplei str. Twist] Length = 344 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 PH+ L L + LTKGCY GQE+V+++ + +R + + LP + IL D Sbjct: 220 LPHE-LGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGK 278 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 +G + V L + V ++ +G L V Sbjct: 279 RVGRVTSVANHWELGPIALGVVKRSVPEGKVLLV 312 >gi|229821893|ref|YP_002883419.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333] gi|229567806|gb|ACQ81657.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333] Length = 396 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPILT 222 PH+ L L + L KGCY GQE V+R+ + +R ++ + G++D LP G+ +L Sbjct: 265 IPHE-LDWLRTAVHLDKGCYRGQETVARVFNMGRPPRRLVLLHLDGSEDVLPEPGTEVLA 323 Query: 223 DDIEIGTLGVVV 234 + +GTL VV Sbjct: 324 EGRPVGTLTSVV 335 >gi|110668998|ref|YP_658809.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] gi|109626745|emb|CAJ53212.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] Length = 373 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%) Query: 122 IADVLLHR--TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 +AD +L T+G N + + ++ L + G NT+ + P+ ++ + N + Sbjct: 198 VADRILETLLTYGLN-GVPFGYQVWNTLAVEAGTPRFNTEL--ADQIPN--VLGIRNALD 252 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKR 203 KGCYIGQE+VS++++R KR Sbjct: 253 FEKGCYIGQEIVSKVENRGQPSKR 276 >gi|296333386|ref|ZP_06875839.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675108|ref|YP_003866780.1| glycine cleavage system protein T [Bacillus subtilis subsp. spizizenii str. W23] gi|296149584|gb|EFG90480.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413352|gb|ADM38471.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus subtilis subsp. spizizenii str. W23] Length = 362 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G ++PFLQ ++T DV +L A+ +A+ P G + L+ + E+ + Sbjct: 49 VSHMGEIEVSGNDSLPFLQRLMTNDVSSLSAGRAQYTAMCYPDGGTVDDLLVYQKGENRY 108 Query: 66 ILEIDRSKRD 75 +L I+ S D Sbjct: 109 LLVINASNID 118 >gi|304310532|ref|YP_003810130.1| Glycine cleavage T protein (aminomethyltransferase) [gamma proteobacterium HdN1] gi|301796265|emb|CBL44473.1| Glycine cleavage T protein (aminomethyltransferase) [gamma proteobacterium HdN1] Length = 374 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 137 IASDIKTYHEL--RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +AS ++ + + + PNT P + D LN I+ KGCY GQE+++R+ Sbjct: 226 LASGLEGWQRCLSELGQAHIHPNTQ---DKFIPQELNYDQLNAINFKKGCYKGQEIIARL 282 Query: 195 QHRNIIRKR 203 + + R Sbjct: 283 HFKGTPKYR 291 >gi|327542384|gb|EGF28867.1| aminomethyltransferase [Rhodopirellula baltica WH47] Length = 342 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 IS TKGCY+GQE V+R+ ++K+ ++ LPP P D + + + Sbjct: 224 ISFTKGCYLGQETVARLDALGQVQKK-LVRWKLAGLPPGAEPAADDKLR----ALDAPED 278 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVR 263 A + RI V +G L + R Sbjct: 279 AKPVGRITSVGRIDDQGEGLAMGYAR 304 >gi|68005366|ref|XP_670005.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56484827|emb|CAI01638.1| conserved hypothetical protein [Plasmodium berghei] Length = 222 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 25/39 (64%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 P D D N IS KGCYIGQEV++R +++ +I K + Sbjct: 71 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 109 >gi|28572820|ref|NP_789600.1| hypothetical protein TW679 [Tropheryma whipplei TW08/27] gi|28410953|emb|CAD67338.1| conserved hypothetical protein [Tropheryma whipplei TW08/27] Length = 321 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 PH+ L L + LTKGCY GQE+V+++ + +R + + LP + IL D Sbjct: 197 LPHE-LGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGK 255 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 +G + V L + V ++ +G L V Sbjct: 256 RVGRVTSVANHWELGPIALGVVKRSVPEGKVLLV 289 >gi|78183841|ref|YP_376275.1| hypothetical protein Syncc9902_0259 [Synechococcus sp. CC9902] gi|78168135|gb|ABB25232.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 265 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 26/192 (13%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE--DTFILE 68 +K+ G+ FLQ +ADV P + LT G++ + D +L Sbjct: 13 LLKLEGEGTRNFLQGQTSADVADTPEGNLVQTCWLTATGRLRALLELRLRANGADVLVLA 72 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---FIDERFSIADV 125 D + D+++F R + +QPI + S SS ++D+ D Sbjct: 73 GDATAVARGFDQVIFPADR----VRLQPI----AEQRRVQRLSTSSAALWLDD-----DS 119 Query: 126 LLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L W N + + E R+ G + N D P + L + +SL+KGC Sbjct: 120 QLPPNWTSNPANPKQFERWRIEQRLVFGPGELNADANPLE-------LGLSDHVSLSKGC 172 Query: 185 YIGQEVVSRIQH 196 Y+GQE V+++ + Sbjct: 173 YLGQETVAKLAN 184 >gi|163784745|ref|ZP_02179551.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1] gi|159879986|gb|EDP73684.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1] Length = 306 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVV 233 IS TKGCY+GQEV++R+ +R K P + + G I+ D +IG + V Sbjct: 209 AISFTKGCYVGQEVIARVHYRG---KPPRTLAKFEVDRQKIKEGEKIIDGDKKIGEITSV 265 Query: 234 VGKKALAIARIDKV 247 + +A+ I K Sbjct: 266 SPVENIALGYILKA 279 >gi|311693662|gb|ADP96535.1| glycine cleavage T-protein (aminomethyl transferase) [marine bacterium HP15] Length = 331 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + G+ KGCY GQEV++R+ ++K I ++DLP G+ + + +G + Sbjct: 218 VGGVHFKKGCYTGQEVIARMHFLGQLKKSLFRFRIEQSEDLPTPGTALFAGERSVGEVVN 277 Query: 233 VVGKKA-----LAIARIDKVDHAI 251 + + LA+ R D ++A+ Sbjct: 278 AIKYRDGSVELLAVVRHDAAENAL 301 >gi|289581173|ref|YP_003479639.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099] gi|289530726|gb|ADD05077.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099] Length = 384 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 25/38 (65%) Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 ++ L + KGCY+GQEVVSR+++R +R + +T Sbjct: 244 VLGLTTALDFEKGCYVGQEVVSRVENRGQPSRRLIGLT 281 >gi|254417054|ref|ZP_05030801.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus chthonoplastes PCC 7420] gi|196176221|gb|EDX71238.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus chthonoplastes PCC 7420] Length = 353 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + +LRI G P+ + L P +A L N IS KGCYIGQE ++R+ ++ Sbjct: 219 RVWQQLRIEQGRPLPDYE-LTEDYNPLEA--GLWNTISFDKGCYIGQETIARLNTYKGVK 275 Query: 202 KR 203 ++ Sbjct: 276 QQ 277 >gi|302535834|ref|ZP_07288176.1| glycine cleavage T protein [Streptomyces sp. C] gi|302444729|gb|EFL16545.1| glycine cleavage T protein [Streptomyces sp. C] Length = 322 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 34/251 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS++ + V G + +L ++T V LP A + IL+ G I LY + + Sbjct: 43 VDLSHRGVVTVTGADRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLVD---D 99 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113 +T ++ +++L+ L FY++ R+ + G + +EH Sbjct: 100 GETVWAHVEPGTQEALLGYLESMKFFYRVEVADRTADFAVVHLPAGSIAEPGKEHV---- 155 Query: 114 SFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRI--NHGIVDPNTDFLPSTIFP 167 + E DV L R A+ + Y LR+ + V TD P Sbjct: 156 --VRETAHGRDVFLPRPQLEAFAAAHGPAAGLLAYEALRVEAHRPRVGAETDH---RTIP 210 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPI-LTD 223 H+ L + + L KGCY GQE V+R+ + +R + + G++ LP G+P+ L Sbjct: 211 HE-LGWIGTAVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPVRLAA 269 Query: 224 DIEIG-TLGVV 233 D E G LG V Sbjct: 270 DGEDGRQLGFV 280 >gi|294056332|ref|YP_003549990.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM 45221] gi|293615665|gb|ADE55820.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM 45221] Length = 307 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 41/250 (16%) Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 MS+VY + + I + A FLQ+ + ++ L +GK++ I Sbjct: 1 MSAVYAYQFTPAALIHASDEDAADFLQSQFSNELRPFAEGRCTYGLWLDVKGKVIADSFI 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----------INGVVLSWNQ 106 + +E++F+L S + L KL + + +V +EI + + W Sbjct: 61 LQCDEESFLLYSATSSAEGLQAKLEQHIIADDVELEISEGARVISLFGPGVESALTEWGA 120 Query: 107 EHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKTYHEL--------RINHGIVDPN 157 F++ A V L W G ++ ++ L R++ VD N Sbjct: 121 -SVPQTGDFVEH----AGVRLLPVWNGPRPRVDCIVRDAAALDTVVDALKRLSVEFVDTN 175 Query: 158 TDFLPST-----IFPHDALMDLLNG--------ISLTKGCYIGQEVVSRIQHRNIIRKRP 204 L + P + L G +S TKGC++GQEVV+R+ + R+ Sbjct: 176 RFELERVEQGYPVVPQELGEGDLPGEGGAENYALSFTKGCFLGQEVVARMHNLGTPRRAL 235 Query: 205 MIITGTDDLP 214 ++G D P Sbjct: 236 YRVSGVGDPP 245 >gi|227876313|ref|ZP_03994426.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227843086|gb|EEJ53282.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 449 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 N + +D+ + +RI + +P + PH+ L L + +SL KGCY GQE V++ Sbjct: 246 NHLVEADLGVWEAVRIARWRPRLGREGMPG-MLPHE-LDWLRSAVSLNKGCYTGQETVAK 303 Query: 194 IQHRNIIRKR 203 + +R +R Sbjct: 304 LVNRGRPPRR 313 >gi|255615044|ref|XP_002539647.1| conserved hypothetical protein [Ricinus communis] gi|223504030|gb|EEF22736.1| conserved hypothetical protein [Ricinus communis] Length = 279 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 S ++V G A FLQ +T DV A A TP+G+I FLI + +E T L + Sbjct: 163 STLQVAGPDAAKFLQGQLTCDVAQATTTQAVPGAHCTPKGRIRSSFLIGRRDEQTHWLRV 222 >gi|157144299|ref|YP_001451618.1| hypothetical protein CKO_00003 [Citrobacter koseri ATCC BAA-895] gi|157081504|gb|ABV11182.1| hypothetical protein CKO_00003 [Citrobacter koseri ATCC BAA-895] Length = 300 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +A + HE ++ G+ D L S I P DAL D L+G+ IG E+ +QH Sbjct: 195 LAGAKRGQHENCLSRGVFDLRARTL-SHILPQDALFDALSGL------LIGHEIAQMLQH 247 Query: 197 RNIIRKRPMIITGTDDL 213 I +++ G+D+L Sbjct: 248 YAIPAHEEIVLVGSDEL 264 >gi|269976111|ref|ZP_06183110.1| glycine cleavage T protein [Mobiluncus mulieris 28-1] gi|307701532|ref|ZP_07638550.1| glycine cleavage T-protein C-terminal barrel domain protein [Mobiluncus mulieris FB024-16] gi|269935704|gb|EEZ92239.1| glycine cleavage T protein [Mobiluncus mulieris 28-1] gi|307613324|gb|EFN92575.1| glycine cleavage T-protein C-terminal barrel domain protein [Mobiluncus mulieris FB024-16] Length = 415 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 N + +D+ + +RI + +P + PH+ L L + +SL KGCY GQE V++ Sbjct: 212 NHLVEADLGVWEAVRIARWRPRLGREGMPG-MLPHE-LDWLRSAVSLNKGCYTGQETVAK 269 Query: 194 IQHRNIIRKR 203 + +R +R Sbjct: 270 LVNRGRPPRR 279 >gi|284028969|ref|YP_003378900.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836] gi|283808262|gb|ADB30101.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836] Length = 334 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 44/253 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + + G + +L A+ T + + + +L+P G + + + + + Sbjct: 45 VDLSHRDVVTISGPDRLTWLHALTTQYFEGMRPGTSTTALLLSPTGHVE-HAMYGVDDGE 103 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------IQPINGVVLSWNQEHTF 110 TF L + +L++ L S V I P +G + + Sbjct: 104 TFWLHTEPGAAAALVEWLQKMVFMSRVEIADVTDAFAIVWRPGTAPADGPLTRSGGDSLG 163 Query: 111 SNSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPST 164 +F+ +E + A++ + + Y LRI G +D + +P Sbjct: 164 GYETFLPREELSAFAEL---------AGPPAGVWAYEALRIEAGAPRLGLDTDERAIP-- 212 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGT-DDLPPSGS 218 + L L G+ L KGCY GQE V+R+ + R ++R + + G+ D LP G Sbjct: 213 ----NELGWLGIGVHLDKGCYRGQETVARVHNLGRPPRRLVR---LHLDGSVDHLPAHGY 265 Query: 219 PILTDDIEIGTLG 231 + D ++G +G Sbjct: 266 AVRAGDKQVGFVG 278 >gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a] gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a] Length = 363 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L + + L KGCY GQE V+R+ + +R +++ + GS + D E+G +G Sbjct: 242 LADAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAPGSAVTADGREVGFVGTS 301 Query: 234 -----VGKKALAIARIDKVDHAIKKGMALTV 259 +G ALAI V ++ G AL V Sbjct: 302 EMHEELGPIALAI-----VKRSVPAGAALVV 327 >gi|288553360|ref|YP_003425295.1| glycine cleavage system aminomethyltransferase T [Bacillus pseudofirmus OF4] gi|288544520|gb|ADC48403.1| glycine cleavage system aminomethyltransferase T [Bacillus pseudofirmus OF4] Length = 365 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G +A+ +LQ ++T DV L A+ +A+ P G + LI + ED + Sbjct: 51 VSHMGEVEVKGDNALAYLQKMMTNDVSKLVDNQAQYTAMCYPNGGTVDDLLIYRKSEDDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKL 86 +L I+ S D +D L +K+ Sbjct: 111 LLVINASNIDKDMDWLNQHKI 131 >gi|223936903|ref|ZP_03628812.1| folate-binding protein YgfZ [bacterium Ellin514] gi|223894472|gb|EEF60924.1| folate-binding protein YgfZ [bacterium Ellin514] Length = 363 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV 234 IS +KGCYIGQEV++RI+ + K + D LP G + D E+G + V Sbjct: 258 ISYSKGCYIGQEVIARIRTYGQVAKALRGLRLDDKLKTLPAKGDKLFHDGKEVGYITSAV 317 Query: 235 GKKAL 239 L Sbjct: 318 SSSKL 322 >gi|227547970|ref|ZP_03978019.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium lipophiloflavum DSM 44291] gi|227079981|gb|EEI17944.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium lipophiloflavum DSM 44291] Length = 377 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 44/277 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ ++ P A + L QG IL + +S + Sbjct: 73 SHRKVIAVSGPDAPTFLNNLLSQKLVDAPEGFAASALDLDIQGHILHHADVS-YANGVYY 131 Query: 67 LEIDRSKRDSLI---DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119 L+ + ++LI K++F+ S E+ GV+ + ++ R Sbjct: 132 LDTPAHQHETLIAFLTKMVFWSQVSINDTEL----GVLTVVGDAPAVAEAAVTRTRPWGE 187 Query: 120 FSIADVLLHRTWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHD 169 DVL+ R G ++ ++ + LR+ G + D +I PH+ Sbjct: 188 TQRTDVLVER--GRVGEVVDKLRDQGVRLAGLMAFTALRVRAGEPELRADLDEKSI-PHE 244 Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT----GTDDLPP-SGS 218 A L+N + L KGCY GQE V+R++ N+ R +++ G+ + P G+ Sbjct: 245 A-PSLINRGPYVGAVHLAKGCYRGQETVARVE--NLGRSPRLLVMLHLDGSAPVDPVPGA 301 Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 I +G LG V G ALA+ + ++ A Sbjct: 302 AITLAGRGVGRLGTVAHDADYGPIALALVKRSALNSA 338 >gi|78047795|ref|YP_363970.1| putative aminomethyl transferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036225|emb|CAJ23916.1| putative aminomethyl transferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 290 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P +D L S+ KGCY GQE+V+R H KR + + TD +G + D Sbjct: 186 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRVLQLLETDAAVDAGDAVALDGSA 244 Query: 227 IGTLGVVVGKKALAI 241 IGT+ V G ALA+ Sbjct: 245 IGTVVSVAGNLALAV 259 >gi|333031446|ref|ZP_08459507.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011] gi|332742043|gb|EGJ72525.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011] Length = 363 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I V G A+ FLQ + + DV L + S + QG I+ FL+ K EED + Sbjct: 48 VSHMGEIWVKGDKALDFLQRVTSNDVSKLQVGKIQYSCFINEQGGIIDDFLVYKYEEDKY 107 Query: 66 ILEIDRSKRD 75 +L ++ + + Sbjct: 108 LLVVNAANTE 117 >gi|299136495|ref|ZP_07029678.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8] gi|298601010|gb|EFI57165.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8] Length = 317 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 28/55 (50%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 + + KGCY+GQE+V RI+ R + + DLP +PI + +G L Sbjct: 217 HALHFNKGCYLGQEIVERIRSRGQVHRTFTAFRLIGDLPTLPAPIEANGKPVGEL 271 >gi|149374722|ref|ZP_01892496.1| predicted aminomethyltransferase [Marinobacter algicola DG893] gi|149361425|gb|EDM49875.1| predicted aminomethyltransferase [Marinobacter algicola DG893] Length = 332 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 37/261 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62 V +S++ +++ G FLQ + + + + +A TP+G+ Y L + + Sbjct: 19 VSVSDRVMVRITGPGTNKFLQGQFSQQIDDVTQDHSPRAAACTPKGRA--YCLTRLVRDG 76 Query: 63 DTFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQP---INGVVLSWNQEHTFSNSS---- 114 D ++E+ + + + L Y L +EI+P I G++ E ++ Sbjct: 77 DDVLMELPAALSEGTVTHLRKYLMLFRGTSMEIEPDARILGLLGEAAAEKLLPGNTGALA 136 Query: 115 ---------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINH 151 +D +A L +T G + + A+ + + I Sbjct: 137 AAGDSVKINGGHLIRTMDTAEGMARYELWQTGGLDTSLQQSLKDLPAAPLADWQASEIAA 196 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ T S + P + GI KGCY GQEV++R+ ++K T +D Sbjct: 197 GVASLTTATTESFV-PQMLNWQHVGGIHFKKGCYTGQEVIARMHFLGQLKKSLFRFTCSD 255 Query: 212 --DLPPSGSPILTDDIEIGTL 230 LP G +L + +G + Sbjct: 256 AGSLPAPGEALLDGERAVGNV 276 >gi|294788261|ref|ZP_06753504.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC 29453] gi|294483692|gb|EFG31376.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC 29453] Length = 274 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-------- 226 + G+ KGCY GQE+++R Q+R + KR + I + +G+P+ + E Sbjct: 183 IGGVHFRKGCYPGQEIIARAQYRGQV-KRGLAIARNPNPQIAGAPVQDANGEEAGLVLNS 241 Query: 227 IGTLGVVVGKKALAIARIDKVDHAI 251 +G L ++V K + + + V ++ Sbjct: 242 VGDLNLLVVKYGVVSSELRDVSGSV 266 >gi|119471895|ref|ZP_01614203.1| putative one-carbon metabolism transcriptional regulator [Alteromonadales bacterium TW-7] gi|119445268|gb|EAW26558.1| putative one-carbon metabolism transcriptional regulator [Alteromonadales bacterium TW-7] Length = 303 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 26/46 (56%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P + + GIS KGCY GQE V+R+++ ++ I++G + Sbjct: 186 PQMVNLQAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSE 231 >gi|321311941|ref|YP_004204228.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis BSn5] gi|320018215|gb|ADV93201.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis BSn5] Length = 362 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 39/70 (55%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ + Sbjct: 49 VSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRY 108 Query: 66 ILEIDRSKRD 75 +L I+ S D Sbjct: 109 LLVINASNID 118 >gi|94969655|ref|YP_591703.1| glycine cleavage T protein, aminomethyl transferase [Candidatus Koribacter versatilis Ellin345] gi|94551705|gb|ABF41629.1| glycine cleavage T protein, aminomethyl transferase [Candidatus Koribacter versatilis Ellin345] Length = 342 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV- 234 + + +KGCY+GQE+V RI R + R L SG+ ++ D E+G + V Sbjct: 247 HALHFSKGCYVGQEIVERIHSRGNVH-RGFTGFSLSQLVNSGTKLVRDGKEVGEITSVAE 305 Query: 235 --GKKALAIARIDK 246 KK +A+ + + Sbjct: 306 LPSKKIIALGYVRR 319 >gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] Length = 364 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 A+ + LR+ P D TI PH+ + + + L KGCY GQE V+++Q+ Sbjct: 209 AAGSWAFTALRVESLRPRPGVDTDEKTI-PHEVNW-IGSAVHLDKGCYRGQETVAKVQNV 266 Query: 198 NIIRKRPMI--ITGTDDL-PPSGSPILTDDIEIGTLGVVV 234 +R ++ + GT ++ P +G P+ D +G +G V Sbjct: 267 GRPPRRMLLLHLDGTREVQPETGDPVRHGDRVVGRVGSVA 306 >gi|218883383|ref|YP_002427765.1| phosphate uptake regulator, PhoU [Desulfurococcus kamchatkensis 1221n] gi|218764999|gb|ACL10398.1| phosphate uptake regulator, PhoU [Desulfurococcus kamchatkensis 1221n] Length = 338 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 21/124 (16%) Query: 22 FLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80 ++ D+L+LP ++ R ++L P LL L +E +T + D +RDSLIDK Sbjct: 122 YIMLACLVDILSLPLSEVLRKMSMLIPA---LLRDLKRNMETNTLL---DMEERDSLIDK 175 Query: 81 LLFYKLRS-NVIIEIQPINGVVL-------SWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 L Y +R N++ ++G +L S + + +N I ER VLLHR W Sbjct: 176 LYLYAIRQLNMV-----LHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHR-WY 229 Query: 133 HNEK 136 +N + Sbjct: 230 NNAR 233 >gi|311740216|ref|ZP_07714048.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC 33035] gi|311304771|gb|EFQ80842.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC 33035] Length = 354 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I+V GK A FL +++ + P G+ L QG IL + I + + D F+ Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRTD-DAFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE 93 +++ ++ DSL L S V +E Sbjct: 110 IDVPGAQFDSLFKFLTMMVFWSEVTVE 136 >gi|291484901|dbj|BAI85976.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. natto BEST195] Length = 362 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 39/70 (55%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ + Sbjct: 49 VSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRY 108 Query: 66 ILEIDRSKRD 75 +L I+ S D Sbjct: 109 LLVINASNID 118 >gi|269218168|ref|ZP_06162022.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str. F0332] gi|269212296|gb|EEZ78636.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str. F0332] Length = 531 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG-TDDLPPSGSPILT 222 PH+ L L + L KGCY GQE V+++ + +R + + G D+LP +G P+ + Sbjct: 361 LPHE-LDWLRTAVHLNKGCYRGQETVAKLVNLGRPPRRLVELFLEGPVDELPRTGDPVTS 419 Query: 223 DDIEIGTLGVVV-----GKKALAIAR 243 ++G + V G ALA+ R Sbjct: 420 GGRKVGVVASAVRHPEDGPVALALVR 445 >gi|124809754|ref|XP_001348671.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7] gi|23497569|gb|AAN37110.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7] Length = 524 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 +N I DI +++ N + D F + P D D LN ++ KGCY+GQE + Sbjct: 309 NNNNIYKDITINNDINKNVKKIKNERDVFTFKNLTPFDLNYDNLNYLTKEKGCYVGQEAI 368 Query: 192 SRIQHRNIIRKRPMII 207 +R ++ I K + + Sbjct: 369 NRTRNEIFISKYSLTL 384 >gi|157692956|ref|YP_001487418.1| aminomethyltransferase [Bacillus pumilus SAFR-032] gi|166989725|sp|A8FF41|GCST_BACP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157681714|gb|ABV62858.1| aminomethyltransferase [Bacillus pumilus SAFR-032] Length = 365 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 51/88 (57%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ + Sbjct: 49 VSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 +L I+ S + ++ LL ++ ++V+I+ Sbjct: 109 LLVINASNIEKDVEWLLQHQGENDVLIQ 136 >gi|194016802|ref|ZP_03055415.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061] gi|194011408|gb|EDW20977.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061] Length = 365 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 51/88 (57%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ + Sbjct: 49 VSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 +L I+ S + ++ LL ++ ++V+I+ Sbjct: 109 LLVINASNIEKDVEWLLQHQGENDVLIQ 136 >gi|91070613|gb|ABE11512.1| conserved hypothetical protein [uncultured Prochlorococcus marinus clone HOT0M-8G12] Length = 278 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 30/194 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK----ILLYFLISKIEEDTFILEI 69 + GK A FL I T+++L K+ + + LTP G I + FL +E ILE Sbjct: 18 ITGKDARKFLNGITTSNILDSENKVIK-TCWLTPNGVLRSLIEIIFLERNLE--VIILEG 74 Query: 70 DRSKRDSLIDKLLF-----YKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSI 122 + ++ + +K++F + +I IQ I+ SW NQ F D+ F I Sbjct: 75 NTNEIINYFNKIIFPVDDVFLSEPFLINRIQEIDEFS-SWRTNQPIFFKTE---DKEFEI 130 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L N I +D+K + +IN I + L DL I K Sbjct: 131 YKNKL------NLLIPNDLKLW---KINQAIPSLGMEINGKNNPLELGLQDL---IDFNK 178 Query: 183 GCYIGQEVVSRIQH 196 GCY+GQE +S+I++ Sbjct: 179 GCYLGQETMSKIKN 192 >gi|148273681|ref|YP_001223242.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831611|emb|CAN02579.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 384 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD-LPPSGSPILT 222 PH+ L L + + L+KGCY GQE V+++ + +R +++ G+D LP +GS + Sbjct: 246 IPHE-LDWLRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVLLQLDGSDAVLPGAGSEVRL 304 Query: 223 DDIEIGTLGVVVG 235 GT G VVG Sbjct: 305 PAAADGTPGEVVG 317 >gi|229820406|ref|YP_002881932.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333] gi|229566319|gb|ACQ80170.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333] Length = 381 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 41/76 (53%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + I+V G +A L A + + V L AR + +L P G +L ++ ++ D F Sbjct: 57 LSHMAQIEVTGPAAAAGLDASVVSRVAALEVGRARYTMLLAPDGGVLDDVIVYRLAADDF 116 Query: 66 ILEIDRSKRDSLIDKL 81 ++ + + R +++D L Sbjct: 117 LVVANAANRLTVLDAL 132 >gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN] gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae] Length = 373 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 11/75 (14%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+Q N+ + M++ G+ + +G +L + +G LG Sbjct: 250 GAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAVGRLG 307 Query: 232 VVV-----GKKALAI 241 VV G ALA+ Sbjct: 308 TVVEHVDLGPVALAL 322 >gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923] gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae] gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 366 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 11/75 (14%) Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE V+R+Q N+ + M++ G+ + +G +L + +G LG Sbjct: 243 GAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAVGRLG 300 Query: 232 VVV-----GKKALAI 241 VV G ALA+ Sbjct: 301 TVVEHVDLGPVALAL 315 >gi|332885678|gb|EGK05924.1| aminomethyltransferase [Dysgonomonas mossii DSM 22836] Length = 365 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I V G A+PFLQ +++ DV TL A+ +AI+ QG I+ +I E + Sbjct: 48 VSHMGEIWVKGPRALPFLQRMLSNDVATLEIGKAQYTAIINDQGGIVDDIIIYHYEPYKY 107 Query: 66 ILEIDRS 72 +L ++ S Sbjct: 108 MLVVNAS 114 >gi|119964440|ref|YP_948688.1| aminomethyltransferase (glycine cleavage system Tprotein) [Arthrobacter aurescens TC1] gi|119951299|gb|ABM10210.1| putative aminomethyltransferase (Glycine cleavage system Tprotein) [Arthrobacter aurescens TC1] Length = 354 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%) Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221 PH+ +DLL + L KGCY GQE ++R+ + +R + + LP GS + Sbjct: 224 IPHE--LDLLRTSVHLNKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTLPAVGSVVF 281 Query: 222 TDDIEIGTLGVV-----VGKKALAI 241 + ++GTL V +G ALA+ Sbjct: 282 VGERKVGTLTSVAQHFEMGPVALAV 306 >gi|156100279|ref|XP_001615867.1| aminomethyl transferase domain containing protein [Plasmodium vivax SaI-1] gi|148804741|gb|EDL46140.1| aminomethyl transferase domain containing protein [Plasmodium vivax] Length = 535 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 P D D LN ++ KGCY+GQE ++R ++ I K + + Sbjct: 334 PFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINKYQLTMC 375 >gi|170783039|ref|YP_001711373.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. sepedonicus] gi|169157609|emb|CAQ02807.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. sepedonicus] Length = 384 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD-LPPSGSPILT 222 PH+ L L + + L+KGCY GQE V+++ + +R +++ G+D LP +GS + Sbjct: 246 IPHE-LDWLRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVLLQLDGSDAVLPGAGSEVRL 304 Query: 223 DDIEIGTLGVVVGK 236 + G G VVG Sbjct: 305 PAADDGAPGEVVGS 318 >gi|308174251|ref|YP_003920956.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens DSM 7] gi|307607115|emb|CBI43486.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens DSM 7] gi|328554197|gb|AEB24689.1| glycine cleavage system aminomethyltransferase T [Bacillus amyloliquefaciens TA208] gi|328912590|gb|AEB64186.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens LL3] Length = 366 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G+ A+ FLQ ++T DV L K A +A+ P G + LI + E + Sbjct: 49 VSHMGEVEVSGQDALSFLQKMMTNDVADLKPKSALYTAMCYPDGGTVDDLLIYQKSETCY 108 Query: 66 ILEIDRS 72 +L I+ S Sbjct: 109 LLVINAS 115 >gi|323359172|ref|YP_004225568.1| aminomethyltransferase [Microbacterium testaceum StLB037] gi|323275543|dbj|BAJ75688.1| predicted aminomethyltransferase [Microbacterium testaceum StLB037] Length = 362 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 6/70 (8%) Query: 165 IFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD-LPPSGSPI 220 + PH+ MD L + L+KGCY GQE V+++ + +R + + G+D+ LP G + Sbjct: 228 LLPHE--MDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRVVALQLDGSDNVLPQRGDEV 285 Query: 221 LTDDIEIGTL 230 D IG + Sbjct: 286 RVGDAVIGAI 295 >gi|221059411|ref|XP_002260351.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193810424|emb|CAQ41618.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 531 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 P D D LN ++ KGCY+GQE ++R ++ I K + + Sbjct: 342 PFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINKYQLTMC 383 >gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c] gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c] Length = 393 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 L + L KGCY GQE V+R+ + +R +++ + GSP+ T ++G +G Sbjct: 278 LTGAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGAVAAPGSPVTTAGRQVGFVG 335 >gi|269124918|ref|YP_003298288.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183] gi|268309876|gb|ACY96250.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183] Length = 328 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILT 222 PH+A + + L KGCY GQE V+R+ + +R +++ D LP G P+ Sbjct: 202 IPHEAGW-IDEAVHLNKGCYRGQETVARVHNLGRPPRRLVMLHLDGSVDHLPAHGDPVEL 260 Query: 223 DDIEIGTLGVV-----VGKKALAIAR 243 +G +G +G ALA+ + Sbjct: 261 GGRRVGFVGTAARHHELGPIALAMVK 286 >gi|116671554|ref|YP_832487.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter sp. FB24] gi|116611663|gb|ABK04387.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter sp. FB24] Length = 361 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%) Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221 PH+ +DLL + L KGCY GQE V+R+ + +R + + LP GS + Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTLPAVGSEVR 288 Query: 222 TDDIEIGTLGVVV-----GKKALAI 241 + ++GT+ VV G ALA+ Sbjct: 289 LGERKVGTVTSVVQHYEMGPIALAV 313 >gi|32470742|ref|NP_863735.1| aminomethyltransferase [Rhodopirellula baltica SH 1] gi|32442887|emb|CAD71406.1| conserved hypothetical protein-putative aminomethyltransferase [Rhodopirellula baltica SH 1] Length = 342 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 IS TKGCY+GQE V+R+ ++K+ ++ LP P D + L K Sbjct: 224 ISFTKGCYLGQETVARLDALGQVQKK-LVRWKLSGLPAGAEPAADDKLR--ALDAPEDAK 280 Query: 238 AL----AIARIDKVDHAIKKGMALTVH 260 + ++ RID + G A H Sbjct: 281 PVGRITSVGRIDDQGEGLAMGYARRSH 307 >gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c [Mycobacterium abscessus ATCC 19977] gi|169239798|emb|CAM60826.1| Conserved hypothetical protein (glycine cleavage T-protein aminomethyl transferase?) [Mycobacterium abscessus] Length = 364 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%) Query: 166 FPHD----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPS 216 PH+ A+ D + L KGCY GQE V+R+ + + K P + G+ D P Sbjct: 222 IPHEVGWIAIGDDPRAVHLAKGCYRGQETVARVHN---LGKPPRALVLLHLDGSADRPAP 278 Query: 217 GSPILTDDIEIGTLGVVV 234 G + +G +G VV Sbjct: 279 GDEVAAAGRAVGRVGSVV 296 >gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] Length = 369 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%) Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTD-DIEI 227 L + L KGCY GQE V+R+ + +R +++ GT LP G P+ + + Sbjct: 244 LSTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLNLDGSVGT--LPEPGEPVTSGAGRAV 301 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 G LG + L + + +++ G L V G+ Sbjct: 302 GRLGTIAQHHELGPIALALIKRSVEAGTPLLVGGI 336 >gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1] gi|172044257|sp|A4J2F6|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1] Length = 364 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 38/70 (54%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I++ G +A F+Q ++T D+ L A S + PQG + L+ ++E+ + Sbjct: 51 VSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQY 110 Query: 66 ILEIDRSKRD 75 +L ++ S D Sbjct: 111 LLVVNASNTD 120 >gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] Length = 376 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 14/75 (18%) Query: 180 LTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVV 233 + KGCY GQE VS++ + RN++ + + G+ ++ P G P+L D +G +G V Sbjct: 261 VAKGCYRGQETVSKVHNVGRPPRNLLL---LHLDGSPEVTPEPGDPVLLDGRTVGRIGTV 317 Query: 234 V-----GKKALAIAR 243 + G ALA+ + Sbjct: 318 IQHHELGPIALALVK 332 >gi|172041293|ref|YP_001801007.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM 7109] gi|171852597|emb|CAQ05573.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM 7109] Length = 391 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 14/82 (17%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE VSR+Q+ + K P + + LP G+ + IG +G Sbjct: 268 VHLNKGCYRGQETVSRVQN---LGKPPRTLVLLHLDGSRNALPEVGTDLTAGGRRIGRVG 324 Query: 232 -----VVVGKKALAIARIDKVD 248 ++G ALA+ R + V+ Sbjct: 325 SSVHDAILGPIALALVRRNVVE 346 >gi|294509140|ref|YP_003566068.1| aminomethyl transferase [Bacillus megaterium QM B1551] gi|294352064|gb|ADE72388.1| aminomethyl transferase [Bacillus megaterium QM B1551] Length = 360 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S +F+KV G SA FLQ +IT D+ L + +L G L+ LI + E+ + Sbjct: 47 FSFNTFLKVSGDSASSFLQELITKDLDYLTEEQTVTCLMLDEDGH-LVTELIVYVMENEY 105 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 +LEI+ S + D L + ++ V+IE Sbjct: 106 LLEIEPSLSEKAEDYLQSH-IKDGVLIE 132 >gi|237785004|ref|YP_002905709.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM 44385] gi|237757916|gb|ACR17166.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM 44385] Length = 448 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-----LPPSGSPILTDDIEIGTLGV 232 + L KGCY GQE VSRIQ N+ R +++ D P G I + ++G +G Sbjct: 313 VHLNKGCYRGQETVSRIQ--NLGRPPRLLVKLQVDGYSARRPEPGEAITSGKRKVGRIGT 370 Query: 233 VV-----GKKALAIARIDKVDHAIKKG 254 VV G AL + + V+ I G Sbjct: 371 VVDDCDEGPIALGLVKRSIVEKLIGSG 397 >gi|110596895|ref|ZP_01385185.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM 13031] gi|110341582|gb|EAT60042.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM 13031] Length = 365 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 37/68 (54%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ V GK A+ FLQ++ T D+ A+ + +L P G I+ +I +I+ +TF Sbjct: 48 VSHMGNFYVRGKRALEFLQSVTTNDISKAKDGQAQYNLMLYPSGGIVDDLIIYRIDSETF 107 Query: 66 ILEIDRSK 73 L ++ S Sbjct: 108 FLIVNASN 115 >gi|300932485|ref|ZP_07147741.1| putative aminomethyltransferase [Corynebacterium resistens DSM 45100] Length = 427 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILTDDIEIGTLG 231 + + KGCY GQE VSR+Q+ + K P ++ + LP GS + IG +G Sbjct: 301 VHMNKGCYRGQETVSRVQN---LGKPPRVLVLLHLDGSANRLPAVGSDFTAEGKTIGRVG 357 Query: 232 VV-----VGKKALAIAR---IDKVDHAIKKGMALTVHGV 262 +G ALA+ + ++K+ + AL GV Sbjct: 358 SSAHDGDLGPIALALVKRGIVEKLASNPQSAPALQADGV 396 >gi|296118897|ref|ZP_06837470.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM 20306] gi|295967995|gb|EFG81247.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM 20306] Length = 359 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 9/68 (13%) Query: 173 DLLNGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGT-DDLPPSGSPILTDDIE 226 +L + L KGCY GQE ++R+++ R ++R + + G+ ++P +G+ I + Sbjct: 231 ELQGAVHLEKGCYRGQETIARVENLGRSPRLVVR---LYLDGSVPEMPETGADITSGGRR 287 Query: 227 IGTLGVVV 234 +G +G ++ Sbjct: 288 VGRVGTII 295 >gi|304380875|ref|ZP_07363535.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340602|gb|EFM06536.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 363 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|282916807|ref|ZP_06324565.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus D139] gi|283770613|ref|ZP_06343505.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19] gi|282319294|gb|EFB49646.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus D139] gi|283460760|gb|EFC07850.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19] gi|298694819|gb|ADI98041.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ED133] Length = 363 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] Length = 376 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 14/73 (19%) Query: 180 LTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVV 233 + KGCY GQE V+++ + RN++ + + G+ ++ P +G P+L D +G +G V Sbjct: 261 VAKGCYRGQETVAKVHNVGKPPRNMVL---LHLDGSQEIYPETGDPVLRGDRTVGRVGSV 317 Query: 234 -----VGKKALAI 241 +G ALA+ Sbjct: 318 AQHHELGPIALAL 330 >gi|221140043|ref|ZP_03564536.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. JKD6009] gi|269941027|emb|CBI49411.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus TW20] gi|302751368|gb|ADL65545.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329314214|gb|AEB88627.1| Aminomethyltransferase [Staphylococcus aureus subsp. aureus T0131] Length = 363 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|15924527|ref|NP_372061.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu50] gi|15927117|ref|NP_374650.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus N315] gi|21283218|ref|NP_646306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MW2] gi|49486373|ref|YP_043594.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MSSA476] gi|57651931|ref|YP_186435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus COL] gi|87160187|ref|YP_494193.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195343|ref|YP_500147.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268021|ref|YP_001246964.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus JH9] gi|150394088|ref|YP_001316763.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus JH1] gi|151221653|ref|YP_001332475.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. Newman] gi|156979855|ref|YP_001442114.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu3] gi|161509765|ref|YP_001575424.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253314906|ref|ZP_04838119.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732190|ref|ZP_04866355.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733214|ref|ZP_04867379.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus TCH130] gi|255006323|ref|ZP_05144924.2| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793613|ref|ZP_05642592.1| glycine cleavage system T protein [Staphylococcus aureus A9781] gi|258411087|ref|ZP_05681367.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9763] gi|258420109|ref|ZP_05683064.1| glycine cleavage system T protein [Staphylococcus aureus A9719] gi|258437369|ref|ZP_05689353.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9299] gi|258443575|ref|ZP_05691914.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A8115] gi|258446782|ref|ZP_05694936.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6300] gi|258448696|ref|ZP_05696808.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6224] gi|258451194|ref|ZP_05699229.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A5948] gi|258453513|ref|ZP_05701491.1| glycine cleavage system T protein [Staphylococcus aureus A5937] gi|262049119|ref|ZP_06021996.1| aminomethyltransferase [Staphylococcus aureus D30] gi|262051200|ref|ZP_06023424.1| aminomethyltransferase [Staphylococcus aureus 930918-3] gi|269203166|ref|YP_003282435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus ED98] gi|282893038|ref|ZP_06301272.1| glycine cleavage system T protein [Staphylococcus aureus A8117] gi|282924785|ref|ZP_06332452.1| glycine cleavage system T protein [Staphylococcus aureus A9765] gi|282929008|ref|ZP_06336595.1| glycine cleavage system T protein [Staphylococcus aureus A10102] gi|284024596|ref|ZP_06378994.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 132] gi|294848567|ref|ZP_06789313.1| glycine cleavage system T protein [Staphylococcus aureus A9754] gi|295406659|ref|ZP_06816464.1| glycine cleavage system T protein [Staphylococcus aureus A8819] gi|296275107|ref|ZP_06857614.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MR1] gi|297207744|ref|ZP_06924179.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245758|ref|ZP_06929623.1| glycine cleavage system T protein [Staphylococcus aureus A8796] gi|300911825|ref|ZP_07129268.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|54037178|sp|P64225|GCST_STAAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54037179|sp|P64226|GCST_STAAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54041304|sp|P64224|GCST_STAAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56748970|sp|Q6G929|GCST_STAAS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|61213198|sp|Q5HFM2|GCST_STAAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122539427|sp|Q2FY33|GCST_STAA8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123485681|sp|Q2FGI5|GCST_STAA3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221573|sp|A7X2S3|GCST_STAA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|172048902|sp|A6QH81|GCST_STAAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039476|sp|A6U208|GCST_STAA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039477|sp|A5IT65|GCST_STAA9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039478|sp|A8Z476|GCST_STAAT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|13701335|dbj|BAB42629.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus N315] gi|14247308|dbj|BAB57699.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu50] gi|21204658|dbj|BAB95354.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MW2] gi|49244816|emb|CAG43270.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|57286117|gb|AAW38211.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus COL] gi|87126161|gb|ABD20675.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202901|gb|ABD30711.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741090|gb|ABQ49388.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus JH9] gi|149946540|gb|ABR52476.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus JH1] gi|150374453|dbj|BAF67713.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|156721990|dbj|BAF78407.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu3] gi|160368574|gb|ABX29545.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723979|gb|EES92708.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728754|gb|EES97483.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus TCH130] gi|257787585|gb|EEV25925.1| glycine cleavage system T protein [Staphylococcus aureus A9781] gi|257840237|gb|EEV64701.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9763] gi|257843820|gb|EEV68214.1| glycine cleavage system T protein [Staphylococcus aureus A9719] gi|257848574|gb|EEV72562.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9299] gi|257850981|gb|EEV74924.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A8115] gi|257854357|gb|EEV77306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6300] gi|257857974|gb|EEV80863.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6224] gi|257861249|gb|EEV84062.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A5948] gi|257864244|gb|EEV86994.1| glycine cleavage system T protein [Staphylococcus aureus A5937] gi|259160837|gb|EEW45857.1| aminomethyltransferase [Staphylococcus aureus 930918-3] gi|259162788|gb|EEW47353.1| aminomethyltransferase [Staphylococcus aureus D30] gi|262075456|gb|ACY11429.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus ED98] gi|282589415|gb|EFB94506.1| glycine cleavage system T protein [Staphylococcus aureus A10102] gi|282592792|gb|EFB97798.1| glycine cleavage system T protein [Staphylococcus aureus A9765] gi|282764356|gb|EFC04482.1| glycine cleavage system T protein [Staphylococcus aureus A8117] gi|283470815|emb|CAQ50026.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ST398] gi|285817219|gb|ADC37706.1| Aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus 04-02981] gi|294824593|gb|EFG41016.1| glycine cleavage system T protein [Staphylococcus aureus A9754] gi|294968406|gb|EFG44430.1| glycine cleavage system T protein [Staphylococcus aureus A8819] gi|296887761|gb|EFH26659.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177409|gb|EFH36661.1| glycine cleavage system T protein [Staphylococcus aureus A8796] gi|300886071|gb|EFK81273.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|312829926|emb|CBX34768.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129814|gb|EFT85804.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS03] gi|315198769|gb|EFU29097.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS01] gi|320140578|gb|EFW32432.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144115|gb|EFW35884.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323440434|gb|EGA98146.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus O11] gi|323443208|gb|EGB00826.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus O46] gi|329727485|gb|EGG63941.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21172] gi|329728484|gb|EGG64921.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21189] gi|329730824|gb|EGG67202.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21193] Length = 363 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|258423190|ref|ZP_05686083.1| glycine cleavage system T protein [Staphylococcus aureus A9635] gi|257846640|gb|EEV70661.1| glycine cleavage system T protein [Staphylococcus aureus A9635] Length = 363 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|49483786|ref|YP_041010.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MRSA252] gi|257425662|ref|ZP_05602086.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428323|ref|ZP_05604721.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430960|ref|ZP_05607340.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 68-397] gi|257433649|ref|ZP_05610007.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus E1410] gi|257436562|ref|ZP_05612606.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M876] gi|282904119|ref|ZP_06312007.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C160] gi|282905946|ref|ZP_06313801.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282911175|ref|ZP_06318977.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914344|ref|ZP_06322130.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M899] gi|282919313|ref|ZP_06327048.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C427] gi|282924638|ref|ZP_06332306.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C101] gi|283958301|ref|ZP_06375752.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293503418|ref|ZP_06667265.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510435|ref|ZP_06669141.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M809] gi|293530975|ref|ZP_06671657.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M1015] gi|295428115|ref|ZP_06820747.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590919|ref|ZP_06949557.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|56749024|sp|Q6GGG2|GCST_STAAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|49241915|emb|CAG40609.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271356|gb|EEV03502.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275164|gb|EEV06651.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278390|gb|EEV09026.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 68-397] gi|257281742|gb|EEV11879.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus E1410] gi|257283913|gb|EEV14036.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M876] gi|282313473|gb|EFB43868.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C101] gi|282317123|gb|EFB47497.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C427] gi|282321525|gb|EFB51850.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M899] gi|282324870|gb|EFB55180.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282331238|gb|EFB60752.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595737|gb|EFC00701.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C160] gi|283790450|gb|EFC29267.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920243|gb|EFD97309.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M1015] gi|291095084|gb|EFE25349.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466799|gb|EFF09319.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M809] gi|295128473|gb|EFG58107.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575805|gb|EFH94521.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|312437995|gb|ADQ77066.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195438|gb|EFU25825.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS00] Length = 363 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|302333213|gb|ADL23406.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus JKD6159] Length = 363 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D + Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 +L ++ + + + +L +K + +V E+Q ++ Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142 >gi|255528029|ref|ZP_05394865.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] gi|255508268|gb|EET84672.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] Length = 370 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F Sbjct: 51 VSHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP 96 L I+ D ++ +K +V II I P Sbjct: 111 YLVINAGNIDKDFKWMMDHKDNLDVDIINISP 142 Searching..................................................done Results from round 2 >gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62] gi|254040268|gb|ACT57064.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62] Length = 273 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI Sbjct: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF Sbjct: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL Sbjct: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA Sbjct: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK Sbjct: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 >gi|315121784|ref|YP_004062273.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495186|gb|ADR51785.1| aminomethyltransferase protein (glycine cleavage) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 271 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 189/271 (69%), Positives = 229/271 (84%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M SVYLS+QSFIKV GKSA FLQ IITAD+ +LP+ +ARGSA+LTPQGKIL YFLISKI Sbjct: 1 MPSVYLSSQSFIKVRGKSASTFLQGIITADITSLPFDVARGSALLTPQGKILFYFLISKI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 EED F+LEI++ +RDS I+KLLFYKLRS+V +E+QPING+ LSWNQE ++ SFIDERF Sbjct: 61 EEDVFVLEINKLQRDSFIEKLLFYKLRSDVALEVQPINGITLSWNQEQAPTSPSFIDERF 120 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 SIA +LLHRTWG+NE+ SD K YHELRIN+GIV+P DF PSTIFPHDALMDL+ GIS Sbjct: 121 SIAGILLHRTWGYNEESTSDPKEYHELRINYGIVEPIPDFPPSTIFPHDALMDLVKGISF 180 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TKGCY+GQEVVSR+QHRNI+RKRP+IITG + LP +GS + D+ +IGTLG++VG+KALA Sbjct: 181 TKGCYVGQEVVSRMQHRNIVRKRPIIITGYNALPANGSSLFVDNTKIGTLGIIVGEKALA 240 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IARIDKV +AI+K MALT G++V + P W Sbjct: 241 IARIDKVSNAIEKNMALTADGIKVTITLPPW 271 >gi|190891087|ref|YP_001977629.1| aminomethyltransferase (glycine cleavage) protein [Rhizobium etli CIAT 652] gi|190696366|gb|ACE90451.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli CIAT 652] Length = 290 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLAADEARPGALLTPQGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ + F D RF Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGISVCWGEDTDGVSLGFRDSRF 127 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L R G + A + Y LRI HGI +DF FPHD LMDL G+S Sbjct: 128 TKAGLTLTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFSLQDAFPHDVLMDLNGGLSF 185 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G LA Sbjct: 186 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVDGGSGLA 245 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ +G L G V + P W Sbjct: 246 IVRIDRAGAAMAEGTPLLAGGTAVSLTLPQW 276 >gi|86357042|ref|YP_468934.1| putative aminomethyltransferase protein (glycine cleavage) [Rhizobium etli CFN 42] gi|86281144|gb|ABC90207.1| putative aminomethyltransferase protein (glycine cleavage) [Rhizobium etli CFN 42] Length = 281 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 4/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F++ + Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIVSLAPDEARPGALLTPQGKILFDFMVWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D ++LE D +RD+L+ +L Y+LR+ V + QP NG+ + W ++ + D RF Sbjct: 60 DGDGYLLETDAGQRDALLKRLTMYRLRAAVTLTTQPENGITVCWGEDADRIGGA-RDSRF 118 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A V L R G + + A + Y LRI HGIV +DF FPHD LMDL G+S Sbjct: 119 AKAGVPLRRRAGRHGEDAPSL--YDSLRIRHGIVTSGSDFSLQDAFPHDVLMDLNGGLSF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +G LG V G LA Sbjct: 177 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPQAGTEITAAGKPVGALGSVEGGSGLA 236 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ +G L V + P W Sbjct: 237 IVRIDRAGAAMAEGTPLLAGQTPVSLALPPW 267 >gi|319784488|ref|YP_004143964.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170376|gb|ADV13914.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 286 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 104/276 (37%), Positives = 142/276 (51%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+ Sbjct: 1 MPCAQLKDRALISVSGPDAEHFLQNILTTDLDILAPGEAKPGALLTPQGKILFDFLISRT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 E+ F LE D + +L YKLR+ V I V ++W E T S S + D Sbjct: 61 GENAFRLECRADISDDFVRRLTLYKLRAKVEITKSDQAFVTVAWGHESTPSQSDSTAAAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF V R++G ++ D+ + RI GI + +D+ FPHD L+D G Sbjct: 121 TRFPKGAVT--RSYGETDEPG-DLAAWQAFRIVGGIAESGSDYQLGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 I KGCY+GQEVVSR+QHR R+R +I + LP G+ + +GTLG V Sbjct: 178 IGFKKGCYVGQEVVSRMQHRGTARRRVLIASADRPLPAPGTELTVAGRPVGTLGSTVDTT 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V + + P W K Sbjct: 238 GLAIARIDRVKAALDAGQPIMAGDVPLTLAIPGWAK 273 >gi|241203903|ref|YP_002974999.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857793|gb|ACS55460.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 284 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 150/273 (54%), Gaps = 5/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLFVSGAEAQSFLQNLITTDITALGPDEARPGALLTPQGKILFDFMIWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118 + D +++E D +RD L+ +L YKLR+ V + GV +SW++ E + D Sbjct: 60 DGDGYMIETDAGQRDGLLKRLTMYKLRAAVTLSPSTEEGVTVSWDEGAEGVRESQGARDS 119 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF+ A V L R G + A + Y LRI+HGIV +DF FPHD LMD G+ Sbjct: 120 RFAKAGVTLTRRAGRHGDGAEVL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFNGGL 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVEGGNG 237 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ A+ G L V P W Sbjct: 238 LAIVRIDRAGAAMAAGTPLLAGDTPVSLVLPAW 270 >gi|209548616|ref|YP_002280533.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534372|gb|ACI54307.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 284 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 149/273 (54%), Gaps = 5/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQ- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118 + D + +E D +RD L+ +L YKLR+ V + + +GV +SW + E + D Sbjct: 60 DGDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDS 119 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 RF+ A V L R G + + Y LRI HGIV DF FPHD LMD G+ Sbjct: 120 RFAKAGVTLIRQPGKHGD--GEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGL 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHG 237 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ AI G L V P W Sbjct: 238 LAIVRIDRAGAAIAAGTPLLAGETPVSLVLPQW 270 >gi|13476462|ref|NP_108032.1| hypothetical protein mll7789 [Mesorhizobium loti MAFF303099] gi|14027223|dbj|BAB54177.1| mll7789 [Mesorhizobium loti MAFF303099] Length = 286 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 105/276 (38%), Positives = 147/276 (53%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ TL + A+LTPQGKIL FLIS+ Sbjct: 1 MPFALLKDRALISVSGPDAEHFLQNILTTDLDTLGAGETKPGALLTPQGKILFDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---SSFID 117 E+ F LE D + +L+ YKLR+ V I + V ++W +E S ++F D Sbjct: 61 GENAFRLECRADISDDFVRRLMLYKLRAKVEIAKSEQSLVAVAWGKESIASENDSTAFAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +RF+ V RT+ A DI + RI HG+ + D+ FPHD L+D G Sbjct: 121 KRFAKESVT--RTYAGIAD-AGDIAAWQAFRIAHGMAESGADYALGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEVVSR+QHR R+R +I+ LP G+ + + +GTLG G Sbjct: 178 VGFKKGCYVGQEVVSRMQHRGTARRRVLIVQAGLALPAPGTELTVEGRPVGTLGSSAGDI 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V V+ + P W K Sbjct: 238 GLAIARIDRVKVALDAGQPILAGDVPVRLAIPAWAK 273 >gi|116251291|ref|YP_767129.1| aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115255939|emb|CAK07020.1| putative aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 287 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 106/276 (38%), Positives = 147/276 (53%), Gaps = 8/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G FLQ +IT D+ L AR A+LTPQGKIL F+I + Sbjct: 1 MPAVFLKDRSLLFVSGAETQSFLQNLITTDIAALGADEARPGALLTPQGKILFDFVIWR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-----SF 115 + + +++E D +RD L+ +L YKLR+ V + GV + W ++ S Sbjct: 60 DGEGYMIETDAGQRDGLLKRLTMYKLRAAVTLAPSTEEGVTVCWGEDADGSQGVRGSQGA 119 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D RF+ A + L R G + + Y LRI+HGIV +DF FPHD LMD Sbjct: 120 RDSRFAKAGITLIRRPGKHGDGKEAL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFN 177 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 G+S KGCY+GQEVVSR+QHR R+R + ++ DLP +G+ I +GTLG V G Sbjct: 178 GGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATDLPGTGTEITAAGKPVGTLGSVDG 237 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LAI RID+ A+ G L V P W Sbjct: 238 GNGLAIVRIDRAGAAMAAGTPLLAGNTPVSLVLPAW 273 >gi|325292432|ref|YP_004278296.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium sp. H13-3] gi|325060285|gb|ADY63976.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium sp. H13-3] Length = 282 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 5/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+++ I+V G A FL +ITADV LP AR SA+LTPQGKIL FLI++ Sbjct: 1 MPSAFLADRRLIRVSGTGAEEFLNNLITADVENLPQGEARASALLTPQGKILFDFLIARD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++E +++D+L+ +L YKLR+ V ++ +PI GV + W++ + + D RF Sbjct: 61 GPD-YLIESGAAEQDALLRRLTMYKLRAPVDLKAEPIEGVSVFWSE--SVPEAGAKDGRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L R G + + DI Y LRI HGI + D+ FPHD LMD+ +G+S Sbjct: 118 AKAGINLFRVPGASA--SGDITAYDALRIEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQEVVSR++HR R+R + ++ LP +G+ I + +G LG V G LA Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSAESALPATGTEITVNGKPVGALGTVCGNTGLA 235 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I R D+V A+ L V V + P W Sbjct: 236 IVRTDRVADALASATPLIAENVPVTVALPAW 266 >gi|154245363|ref|YP_001416321.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] gi|154159448|gb|ABS66664.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] Length = 292 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 130/272 (47%), Gaps = 2/272 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M VYL+++ I+ G A FL +IT +V T+ AR A+LTPQGKI+ FL Sbjct: 1 MPVVYLTDRVLIRATGPEASKFLHGVITCNVQTMATGDARYGALLTPQGKIISDFLFYAE 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F+ ++ + + L+ +L F++LR+ V V + + + D R Sbjct: 61 GDDAFLFDVPAERAEDLLKRLTFHRLRAKVTFTKADDLAVAAVFGDAAEVPEGALYPDPR 120 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + L + ++SD Y RI GI DF FPH+A MD L G+ Sbjct: 121 LAALGQRLVLPLTAAQALSSDPALYEAHRIALGIPKGGPDFTYGDTFPHEADMDQLGGVD 180 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEVVSR++HR+ R R + + L +G I D +G + V + + Sbjct: 181 FKKGCYVGQEVVSRMEHRSTPRNRLVEVLFDTPL-ATGQEITAGDKSVGQVLSVTDGRGI 239 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 A R+D+ + A G+ L V V+ P W Sbjct: 240 ATVRLDRANDAKTDGVPLLAGEVPVELRRPDW 271 >gi|316932611|ref|YP_004107593.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1] gi|315600325|gb|ADU42860.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1] Length = 293 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 12/281 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +LS++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MQAAFLSDRGVLKISGPDARHLLNGLVTTDLTKLAPGAGRFGALLTPQGKIVADFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E F Sbjct: 61 PAEDDGGFLLDCPKPLTEALATKLKFYKLRAKVLIENLSDRLGVLALWGGEPPQPPEMGF 120 Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T + Y RI G+ DF + FPH Sbjct: 121 RDPRGEQLGWRILVPEILATATAEALGATMATASAYEAHRIGCGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLHGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGAAPQPGSEITAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 T+G + LA+ RID+V A + + L+ GV + + P Sbjct: 241 TMGSSASGRGLALLRIDRVAEAREASVPLSAGGVPLLIADP 281 >gi|92119419|ref|YP_579148.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] gi|91802313|gb|ABE64688.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] Length = 293 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 94/282 (33%), Positives = 143/282 (50%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + R A+LTPQGKI FLI++ Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEA 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 F+++ S SL KL FYKLR+ V ++ I GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPDLTF 120 Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + R + Y RI G+ TDF+ FPH Sbjct: 121 ADPRSDRLGWRILAPEELATRAATVIGAELVESADYDAHRIAAGVPSGGTDFMFGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCY+GQEVVSR++HR R R + + D P +G+ I+ D +G Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVLLDDGAPDAGTAIVAADKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G + LA+ R+D+ AI+ G+ALT G+ ++ + P Sbjct: 241 TMGSSAASQGLALLRLDRAADAIEAGIALTAGGIPIRVADPD 282 >gi|254501842|ref|ZP_05113993.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222437913|gb|EEE44592.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 296 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 97/283 (34%), Positives = 149/283 (52%), Gaps = 12/283 (4%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L +++ I+V G A FLQ ++TAD+ L + SA+LTPQGKIL FLI K + Sbjct: 5 NIAPLHDRALIRVSGPDAEHFLQNLVTADIDELADPGSTLSALLTPQGKILFDFLIYK-Q 63 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSS---FID 117 ++++ + L+ +L FY+LR+ V +E + V + W + + +N + ID Sbjct: 64 NSGYLIDAPKETSADLLKRLTFYRLRAKVDLEAAGEDVCVFALWGGDLSDTNGAELVVID 123 Query: 118 ERFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 R + + G + A+ D++ Y R+ G+ + DF S IFPHDA MD Sbjct: 124 PRLAALGQRVVGPTGFADASAATVKDLEAYDAHRVALGVPEGLKDFAYSDIFPHDADMDQ 183 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 L G+S KGCY+GQEVVSR+ HR RKR + I LP G+ ++ +D +G LG Sbjct: 184 LGGVSFKKGCYVGQEVVSRVHHRGTARKRFIQIEAAGALPEKGTSVIANDKSVGELGSST 243 Query: 235 ----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +A+ R+DKV AI+ G+ LT V + P W + Sbjct: 244 MIDGQAFGVALLRLDKVHQAIENGVPLTCGDVAITVKLPDWAE 286 >gi|218661628|ref|ZP_03517558.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli IE4771] Length = 278 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 148/272 (54%), Gaps = 11/272 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLASDEARPGALLTPQGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 + D +++E D +RD L+ +L YKLR+ V + + GV + W ++ + Sbjct: 68 DGDGYMIETDAGQRDGLMKRLTMYKLRAAVTLALVAEEGVSVCWGEDEDGIRDAESVRDS 127 Query: 115 --FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 D RF+ A + L R G + A + Y LRI HGI +DF FPHD L+ Sbjct: 128 RGVRDSRFAKAGIALTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFALQDAFPHDVLL 185 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG Sbjct: 186 DLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGTGTEITAAGKPVGTLGS 245 Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 V G LAI RID+ A+ +G L V Sbjct: 246 VAGGSGLAIVRIDRAGAAMAEGTPLLAGETPV 277 >gi|75676888|ref|YP_319309.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] gi|74421758|gb|ABA05957.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI + FLI++ Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKITVDFLITEA 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 F+++ L KL FYKLR+ V +E + GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLPLAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 116 IDERFSIADV-------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R L R + Y RI G+ DF FPH Sbjct: 121 ADPRSDRLGWRSLVPEELAARAATVIGAELVESADYEAHRIRAGVPSGGADFNFGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + +G Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARNRIVRVHLDGGAPEPGTAVVAGEKPVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G + LA+ R+D+ AI+ G+ LT GV ++ + P Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGGVPIRVAEPD 282 >gi|312113562|ref|YP_004011158.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100] gi|311218691|gb|ADP70059.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100] Length = 290 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 7/277 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S L +++ +KV G + FL +IT DV L AR S +L+PQGKIL F + + Sbjct: 1 MPSTLLPDRAVLKVTGDDHVSFLHGLITNDVEHLGNDEARFSGLLSPQGKILFDFFVVRH 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF-----SNSS 114 + F ++ +++ D+L+ +L YKLR+ V + ++ W ++ + Sbjct: 61 GDTHF-IDAPKAQADALLKRLTMYKLRAKVDVADVSDKTAAGAIWGEDAAAWAKANGGLA 119 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + D R + + + + + Y RI + + D+ S FPH+A D Sbjct: 120 YADPRLPELGSRILISAAAAPAVTATPEDYAAHRIALAVPEGGADYAFSDAFPHEACFDF 179 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 L+G+ KGC++GQEVVSR+QHR R R + +T + DLP G+ I+ +G LG V Sbjct: 180 LHGMDFKKGCFVGQEVVSRMQHRGTARTRVLSVTASADLPEGGADIVAGGFPVGRLGSVY 239 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G +A+ARID+V A+ KG+ALTV V + PHW Sbjct: 240 GAHGVALARIDRVRDALAKGLALTVGAADVDLTVPHW 276 >gi|222085402|ref|YP_002543932.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium radiobacter K84] gi|221722850|gb|ACM26006.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium radiobacter K84] Length = 279 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 6/271 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++SF++V G A PFL +IT D+++L AR A+LTPQGKIL F+IS+ Sbjct: 1 MPAVFLRDRSFLRVTGAEAEPFLHNLITTDLVSLGTDEARPGALLTPQGKILFDFMISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + F+LE D ++RD L+ +L Y+LR+ V + GV ++W D RF Sbjct: 60 DGPGFLLETDTAQRDGLLKRLTMYRLRAPVDFAVGETEGVTVAWGDNVA---EGPRDSRF 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + L RT GH+ A + Y LRI +GI DF FPHD L+DL G+ Sbjct: 117 AKAGIALTRTSGHHGDDAEAL--YEALRIANGIAVSGQDFALQDAFPHDVLLDLNGGLGF 174 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR+ R+R +I+ G+ DLP SG+ + IGTLG + G LA Sbjct: 175 RKGCYVGQEVVSRMQHRSTARRRVVIVIGSADLPASGTELTAGGKPIGTLGSIEGANGLA 234 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ AI G + G V + P W Sbjct: 235 IVRIDRAGEAIAAGTPILAAGHEVSVALPVW 265 >gi|85714363|ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] gi|85698810|gb|EAQ36679.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] Length = 293 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI+ FLI++ Sbjct: 1 MKAAFLPDRGVVKVIGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKIIFDFLITEA 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 F+++ + L KL FYKLR+ V +E + GV+ +W+ E + +F Sbjct: 61 QPGHGGGFLIDCPLALAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 116 IDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + + A+ + Y RI GI DF FPH Sbjct: 121 ADPRSDKLGWRILAPEELAGRAATVIGAELVESADYEAHRIAAGIPSGGNDFKFGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + +G Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVRLDAGAPEPGTAVVAGEKAVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G + LA+ R+D+ AI+ G+ LT + + + P Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGDIPIHVAEPD 282 >gi|192289666|ref|YP_001990271.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1] gi|192283415|gb|ACE99795.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1] Length = 293 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120 Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T Y RI G+ DF + FPH Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G + LA+ RID+V A + + L+ GV + + P Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPD 282 >gi|39934143|ref|NP_946419.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris CGA009] gi|39647991|emb|CAE26511.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris CGA009] Length = 293 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++ Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120 Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L T Y RI G+ DF + FPH Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEINAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G + LA+ RID+V A + + L+ GV + + P Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLAIADPD 282 >gi|148253866|ref|YP_001238451.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. BTAi1] gi|146406039|gb|ABQ34545.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. BTAi1] Length = 294 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 13/280 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ ++V G A FL + T DV L AR A+LTPQGKI++ FL++++ Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLFTTDVSKLHPGEARFGALLTPQGKIIVDFLVTQV 60 Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSS 114 + F+L++ R+ +L DKL YKLR+ V + + GV+ W+ S Sbjct: 61 PASNGGERFLLDVPRALAQALTDKLNVYKLRAKVAVSNLSDQLGVIAVWDGAVGATPEPS 120 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFP 167 F D R + + G + IA + Y RI+ + DF+ FP Sbjct: 121 FTDPRHESLGARVIASQGALQDIAGGLGAEVVTADAYEAHRIDCAVPRGGLDFMYGDAFP 180 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 H+ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + + Sbjct: 181 HETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGEKSV 240 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 GT+G +K +A+ RID+ A++ G LT G+ ++ + Sbjct: 241 GTMGSASQQKGMALLRIDRATEAMEAGTPLTAGGLTLRVA 280 >gi|163760578|ref|ZP_02167659.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea phototrophica DFL-43] gi|162282193|gb|EDQ32483.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea phototrophica DFL-43] Length = 272 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 3/260 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A FLQ +ITA+V TL + +A+LTPQGKIL FLIS+ E F L+ID Sbjct: 1 MHVDGAEAEHFLQNLITANVETLKSGCVQAAALLTPQGKILFDFLISRAPEGGFHLDIDG 60 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 D + +L YKLR+NV + Q V+ W+Q +++ ID RF + R + Sbjct: 61 KLTDGFMKRLTLYKLRANVSFDRQADTPVIAGWDQPR--PDAALIDNRFPET-AGVWRLY 117 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 G N + + + LRI +G+ + +D+ S FPHD LMD +G+ KGCY+GQEVV Sbjct: 118 GSNANLGAGQADWDSLRIAYGVAESGSDYALSDAFPHDILMDKNHGVDFRKGCYVGQEVV 177 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI 251 SR+ HR R+R + ++G LPPSG+ I +G LG V G +ALAI RID+V A+ Sbjct: 178 SRMHHRGTARRRVVTVSGEATLPPSGTSIQAGTKPVGELGTVSGDRALAIVRIDRVADAM 237 Query: 252 KKGMALTVHGVRVKASFPHW 271 LT G+ V + P W Sbjct: 238 AAEHQLTADGIAVTLTLPDW 257 >gi|91975718|ref|YP_568377.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] gi|91682174|gb|ABE38476.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] Length = 293 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--- 57 M + +L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ FLI Sbjct: 1 MKAAFLPDRGVIKISGADARHLLNGLVTTDLTLLKPGLGRFGALLTPQGKIVADFLITEG 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHT-FSNSSF 115 + ++ F+++ ++ L DKL FYKLR+ V+IE + GV+ +W +F Sbjct: 61 AAADDGGFLIDCPKALAQPLADKLKFYKLRAKVLIENLSDRLGVLAAWGGAPAETPELAF 120 Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + +T D+ Y RI G DF FPH Sbjct: 121 ADPRHDDLGWRIITPELLAQKTAAAIGAELVDVAAYEAHRIACGAPAGGVDFAYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ MD L+G+ KGCYIGQEVVSR+ HR R R + + P +G+ I+ + +G Sbjct: 181 ESNMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLLDGAGPEAGAEIIAGEKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G V LA+ RID+V A + ++ G+ ++ + P Sbjct: 241 TMGSSVDGHGLALLRIDRVADARDASLPISAGGITLRLADPD 282 >gi|158422025|ref|YP_001523317.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571] gi|158328914|dbj|BAF86399.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571] Length = 281 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 4/274 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59 M+ +L ++ + V G A FL ++T ++ +L AR A+L PQGKI+ FLI Sbjct: 1 MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP 60 Query: 60 -IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFID 117 +T +L++ ++ + L+ + Y+LR+NV E Q + +V W E +F D Sbjct: 61 VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R E + D Y RI GI + DFL FPH+A MD L G Sbjct: 121 PRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQLGG 180 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCYIGQEVVSR QHR I R R + P SG+ I + +G +G + G + Sbjct: 181 VDFKKGCYIGQEVVSRTQHRGIARTRTV-AALLAGAPESGTEIKAGEKTVGRIGSIAGGQ 239 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +A+ R+D+ A G+ L V V P W Sbjct: 240 GIALVRLDRAAEAKASGLPLLAGDVEVTLKAPDW 273 >gi|260462304|ref|ZP_05810512.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075] gi|259031798|gb|EEW33066.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075] Length = 286 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 137/276 (49%), Gaps = 6/276 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+ Sbjct: 1 MPFTLLKDRALISVSGPDAEHFLQNILTTDLDVLGESEAKPGALLTPQGKILFDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 E+ LE D + +L+ YKLR+ V I V ++W +E S + D Sbjct: 61 GENALRLECRADISDDFVRRLMLYKLRAKVEIAKPEQALVSVAWGKESIALQSDSTAVAD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + R++ + + RI HGI + D+ FPHD L+D G Sbjct: 121 RRF--GGESVTRSYAGAAQADD-GAAWQTFRIAHGIAESGADYALGDAFPHDVLLDETGG 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEVVSR+QHR R+R +I+ LP +G+ + + +G LG G Sbjct: 178 VGFRKGCYVGQEVVSRMQHRGTARRRVLIVQSELPLPVAGTELTVEGRPVGALGSSAGTT 237 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAIARID+V A+ G + V V P W K Sbjct: 238 GLAIARIDRVKAALDAGRPILAGDVPVTLIIPTWAK 273 >gi|15888395|ref|NP_354076.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium tumefaciens str. C58] gi|15156077|gb|AAK86861.1| glycine cleavage system T protein, aminomethyltransferase [Agrobacterium tumefaciens str. C58] Length = 282 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 104/271 (38%), Positives = 156/271 (57%), Gaps = 5/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MSS +L+++ I+V G A FL +ITAD+ LP R SA+LTPQGKIL FLI + Sbjct: 1 MSSAFLADRRLIRVSGTGAEEFLNNLITADIENLPEGETRASALLTPQGKILFDFLIWRD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++E +++D+L+ +L YKLR+ V ++ + + G+ + W ++ + + D RF Sbjct: 61 GRD-YLVETGAAEQDALLRRLTMYKLRAPVELKAETVEGIGVFWG--NSVTEAGVRDGRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A V L R G + Y LR+ HGI + D+ FPHD LMD+ +G+S Sbjct: 118 AKAGVDLRRVPGASASGE--AAAYEALRVEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQEVVSR++HR R+R + ++ LP SG+ I + +G LG V G +ALA Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSADGTLPASGTEITANGKPVGALGTVYGNRALA 235 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I R D+V A+ G L V V + P W Sbjct: 236 IVRTDRVADALAAGTPLLADNVAVSVALPAW 266 >gi|188584007|ref|YP_001927452.1| folate-binding protein YgfZ [Methylobacterium populi BJ001] gi|179347505|gb|ACB82917.1| folate-binding protein YgfZ [Methylobacterium populi BJ001] Length = 285 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 91/272 (33%), Positives = 136/272 (50%), Gaps = 3/272 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLLSRD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 + F L++ + L+ +L Y+LR+ V + P GV +W+ T +++ D R Sbjct: 61 GGNGFRLDVAAERVPDLVKRLGLYRLRAKVTVAADPTLGVAAAWDGSETAADTVRVRDGR 120 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ + G A++ + YH RI G+ + DF S FPH+ALMD L G+ Sbjct: 121 LPALGERLYFSQGAFSADATE-EDYHAHRIGLGVPEGGRDFALSDAFPHEALMDQLGGVD 179 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + + P G+ + +GT G G + Sbjct: 180 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPAPGTEVTAGARSLGTTGSAAGHRG 239 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA R+D++ A+ + G P Sbjct: 240 LATIRLDRLGDALAADEPVRAGGTVAAVGKPD 271 >gi|86748242|ref|YP_484738.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris HaA2] gi|86571270|gb|ABD05827.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris HaA2] Length = 293 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 140/282 (49%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ F I++I Sbjct: 1 MKAALLPDRGVIKISGADARHLLNGLVTTDLTLLEPGLGRFGALLTPQGKIVADFFITEI 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115 ++ F+L+ ++ + L KL FYKLR+ V+IE + GV+ W+ +++ +F Sbjct: 61 AAEDDGGFLLDCPKTLAEPLTTKLKFYKLRAKVLIENLSDRLGVLAVWDGAPAATSAPAF 120 Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + ++L H+T D Y RI G DF FPH Sbjct: 121 TDPRNDQLGWRIIVPELLAHKTAEAIGAELVDAAAYEAHRIACGAPAGGVDFAYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCYIGQEVVSR+ HR R R + + P GS I D +G Sbjct: 181 EANMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLIDGAAPQPGSEITAGDKSVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G LA+ RID+V A + + L G+ ++ P Sbjct: 241 TMGSSADGCGLALLRIDRVADAREASLPLGAAGIALRLVDPD 282 >gi|90425803|ref|YP_534173.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB18] gi|90107817|gb|ABD89854.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB18] Length = 293 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 143/281 (50%), Gaps = 12/281 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+N+ +K+ G+ A FL ++T D+ L R A+LTPQGKI+ F ++++ Sbjct: 1 MKSAFLANRGVVKISGEDARHFLNGLVTTDMTKLTPSQGRFGALLTPQGKIVADFFVTEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115 ++ F+L+ R L DKL FYKLR+ V++E + GV+ W+ E T + F Sbjct: 61 PAADDGGFLLDCPRELAQPLADKLKFYKLRAKVLVENLSDRLGVLAIWDGELTTLPEACF 120 Query: 116 IDERFSIADV-------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R L ++T D Y RI+ G DF FPH Sbjct: 121 ADPRDPKLGWRCLLPVELANKTAEWIGAPLVDAVLYDARRISCGAPAGGVDFRYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+G+ KGCY+GQEVVSR+QHR R R + + P GS +L D +G Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMQHRGTARTRTVRLGFDGAQPEPGSELLAADKPVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LG + LA+ RID++ A++ AL+ GV V+ P Sbjct: 241 HLGSLADGVGLALVRIDRLAEAVEAASALSAGGVAVRLLDP 281 >gi|254471836|ref|ZP_05085237.1| glycine cleavage T protein [Pseudovibrio sp. JE062] gi|211959038|gb|EEA94237.1| glycine cleavage T protein [Pseudovibrio sp. JE062] Length = 280 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 144/268 (53%), Gaps = 6/268 (2%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64 L+++ +KV G A FLQ +++ DV L + A+LTPQGKIL F + E D Sbjct: 8 LTSRRLVKVFGDDAKEFLQNLVSCDVSELSATSSAFGALLTPQGKILWDFFVFADESTDG 67 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFSIA 123 F++++ + D+ +L FYKLR+ V +E VV W + + D R + Sbjct: 68 FLIDVSADELDAFAKRLAFYKLRAKVTVEPADEAVHVVAEWGDD--LPSDKPQDPRLAEM 125 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + + G E+ AS+ YH RI GI DF + +FPHD MD LNG++ +KG Sbjct: 126 GLR-YIVTGEVEETASE-ADYHAHRIGLGIPQSGQDFQLADVFPHDTDMDSLNGVAFSKG 183 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C+IGQEVVSR++HR RKR + ++ DLP +GS IL + +G+LG G LA+ R Sbjct: 184 CFIGQEVVSRMKHRGTARKRVIKVSADSDLPATGSDILAGEKSVGSLGSSAGGAGLAMLR 243 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 +D+ A+ G+ L GV + S W Sbjct: 244 LDRAKAAMDAGVPLMCEGVTLSPSIQAW 271 >gi|146339093|ref|YP_001204141.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. ORS278] gi|146191899|emb|CAL75904.1| putative glycine cleavage T protein (aminomethyl transferase) [Bradyrhizobium sp. ORS278] Length = 294 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 144/286 (50%), Gaps = 19/286 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L ++ ++V G A FL ++T DV L AR A+LTPQGKI++ FL+++ Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLVTTDVTKLVPGDARFGALLTPQGKIIIDFLVAQA 60 Query: 61 E----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ-EHTFSNSS 114 + F+L+ R+ +L DKL YKLR+ + + + GV+ WN T + S Sbjct: 61 PTGDAGERFLLDCPRALAQALADKLNLYKLRAKLTVANLSDQLGVIAVWNGTPATALDLS 120 Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164 F D R D L HR ++A Y RI + DF+ Sbjct: 121 FTDPRH---DGLGHRIIAPQTELAEIATRLGAEVVTADAYEAHRIECTVPRGGLDFMYGD 177 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 FP++ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + Sbjct: 178 AFPYETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGE 237 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 +GT+G +K LA+ RID+ A++ G LT G+ ++ + P Sbjct: 238 KTVGTMGSAAAQKGLALLRIDRAAEAMEAGTPLTAGGLTLRIADPD 283 >gi|27377665|ref|NP_769194.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] gi|27350810|dbj|BAC47819.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 140/282 (49%), Gaps = 12/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L ++ +KV G+ A FL ++T D+ L + R A+LTPQGKI++ FLI+++ Sbjct: 1 MKSAFLPDRGVVKVAGEDARNFLNGLVTTDLDRLKPGLGRFGALLTPQGKIIVDFLITEV 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115 F+++ ++ + L KL FYKLR+ +E + GV+ +W+ + +F Sbjct: 61 PAGHGGGFLIDCPKALAEGLATKLKFYKLRAKATVENLSDDLGVLAAWDGALAAQPDLAF 120 Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + + D Y RI G+ DF+ S FPH Sbjct: 121 ADPRHDGLGTRILIPEDLKQKLSDLIGAELVDAAAYEAHRIALGVPRGGLDFMYSDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ IL D +G Sbjct: 181 ETNMDRLAGVDFDKGCYVGQEVVSRMQHRGTARTRSVKVLLDGPSPEIGAAILAGDKPVG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T+G K +A+ RID+V A+ G LT G+ + + P Sbjct: 241 TIGSSADGKGIALVRIDRVADALDAGQPLTAGGLALTLAEPE 282 >gi|110633313|ref|YP_673521.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium sp. BNC1] gi|110284297|gb|ABG62356.1| glycine cleavage T protein (aminomethyl transferase) [Chelativorans sp. BNC1] Length = 288 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 4/276 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M SV LS+++ + G A LQ IIT D+ L AR A+LTPQGKIL FLIS+ Sbjct: 1 MPSVELSDRTVLLAAGPDAEALLQNIITTDLSALGQDEARPGALLTPQGKILFDFLISRT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 +D F L+ + +L+ Y+LR+ + I + +SW + S + S +D Sbjct: 61 GQDGFRLDCRSDLAQDFLKRLMLYRLRAKAELSIDNNAVISVSWGNDSLSSQTDSMSVVD 120 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF A + + R +G ++ ++DI + LR+ HG+ + D+ FPH+ L D G Sbjct: 121 RRFPEA-LKVARRYGSADEGSADISAWDRLRVEHGVAESGRDYDLGDAFPHEILFDQNGG 179 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + L KGCY+GQEVVSR+ HR R+R +I+ G LP SGS I D IG LG V Sbjct: 180 VGLKKGCYVGQEVVSRMHHRGTARRRLVIVRGDKALPASGSQITADGRAIGALGTVCDAD 239 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LAI RID+ AI+ G + + P + K Sbjct: 240 GLAILRIDRAAEAIQAGNPILAGEAALSLKVPAFAK 275 >gi|118589212|ref|ZP_01546618.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia aggregata IAM 12614] gi|118437912|gb|EAV44547.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia aggregata IAM 12614] Length = 308 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 144/290 (49%), Gaps = 20/290 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S LS++S I+V G A FLQ ++TAD+ + A A+LTPQGKIL FLI ++ Sbjct: 8 LSYAPLSDRSLIRVGGADAQHFLQNLVTADIDGMKDGGASAGALLTPQGKILFDFLIYRL 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQ----------EHT 109 E ++L+ + L+ +L FY+LR+ V +E+ P N GV+ W+ + Sbjct: 68 -ESGYLLDAPSATAADLVKRLTFYRLRAKVDLELLPENVGVIALWDDNPEAGKGLDSDVD 126 Query: 110 FSNSSFIDERFSIADVLLH----RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 + S+ D R + A D+ Y RI+ G+ + D+ S I Sbjct: 127 GALSAVTDPRLPALGKRIAGPVVELALKLLATAQDLAAYDRHRISMGVPEGLKDYDYSDI 186 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 FPHDA +D L G+S +KGCY+GQEVVSR+ HR RKR + I +D LP G+ I Sbjct: 187 FPHDADLDQLGGVSFSKGCYVGQEVVSRMHHRGSARKRFVQIESSDALPEKGTDITAGGK 246 Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IG LG G LA+ R+DKV A G L + P W Sbjct: 247 SIGALGSSALTDDGAVGLALLRLDKVAQAKDNGTPLQCGDAEILVKLPDW 296 >gi|222148091|ref|YP_002549048.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] gi|221735079|gb|ACM36042.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] Length = 279 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L N++F+KV G A FL ++TAD+ + A SA+LTPQGKIL L+ + Sbjct: 1 MPAVFLENRAFLKVAGAEAAHFLNNLLTADLGLIEPGQAAPSALLTPQGKILFDMLVYPL 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D ++LE+ ++++L+ +L YKLR+ V + +GV + W+ T +F D RF Sbjct: 61 A-DGYLLEVASDEQEALLRRLTLYKLRAAVTLTPAEFSGVTVIWDNVPT---GAFQDRRF 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + A + R G DI+ Y LRI G+ + D+ +PHD L+DL G+S Sbjct: 117 AAAGETVWRVPGRVNSAGDDIRLYTALRIKAGVAEAGLDYPLQDAYPHDVLLDLNGGVSF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+ HR + R+R I++ LP +G+ + D +GTLG V+ LA Sbjct: 177 KKGCYVGQEVVSRMHHRKMARRRIAIVSADTALPATGTELRADGKPLGTLGTVLDTIGLA 236 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RID+ A+ G + V+ P W Sbjct: 237 ILRIDRTGDAMANGTPILAGDQAVRLHLPAW 267 >gi|209886048|ref|YP_002289905.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5] gi|209874244|gb|ACI94040.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5] Length = 313 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 144/282 (51%), Gaps = 13/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +LS++ IKV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I Sbjct: 23 MKSAFLSDRGVIKVGGEDARHFLNGLVTTNIELVRPGLGRFGALLTPQGKIIADFLVTEI 82 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 F+L+ +S L +L YKLR+ V+IE + GV+ W+ + + +F Sbjct: 83 PAGHGGGFLLDCPKSLAQPLTARLSIYKLRAKVVIENLSDSLGVLAVWDGQPQMTPDLAF 142 Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + + + + Y RI G DF + FPH Sbjct: 143 ADPRDNELGWRILVPAELAEKAAAAIGATMTSEADYEAHRIACGAPRGGVDFGYNDAFPH 202 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 DA MD L+G+ KGCYIGQEVVSR+QHR R R + + D+ SG+ ++ + +G Sbjct: 203 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARNRIVRVGIDGDV-ASGTTVMAGEKTVG 261 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T G G LA+ R+D+V+ AI+ G+A+T G + P Sbjct: 262 TFGSSAGGHGLALLRVDRVNDAIESGLAVTAEGHALTFVAPQ 303 >gi|218532559|ref|YP_002423375.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4] gi|218524862|gb|ACK85447.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4] Length = 284 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|163853701|ref|YP_001641744.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1] gi|163665306|gb|ABY32673.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1] Length = 284 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W T + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWEGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|307300928|ref|ZP_07580697.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] gi|307321831|ref|ZP_07601217.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] gi|306892500|gb|EFN23300.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] gi|306903883|gb|EFN34469.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] Length = 282 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 108/271 (39%), Positives = 147/271 (54%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ Sbjct: 1 MPMVCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF Sbjct: 60 DGEALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A V + R + + I LRI GI D+ FPHD LMDL G+S Sbjct: 118 EKAGVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI K A+ VR+ + P W Sbjct: 238 IVRIDKAGEAIAKSEAILAGDVRLTLTLPAW 268 >gi|328544948|ref|YP_004305057.1| aminomethyltransferase protein (glycine cleavage) [polymorphum gilvum SL003B-26A1] gi|326414689|gb|ADZ71752.1| Putative aminomethyltransferase protein (Glycine cleavage) [Polymorphum gilvum SL003B-26A1] Length = 295 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 96/286 (33%), Positives = 151/286 (52%), Gaps = 14/286 (4%) Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 M++ L+++ ++V G A FLQ +IT D+ A A+LTPQGKIL FLI Sbjct: 1 MTAARYALLASRGVVEVGGPEAHHFLQNLITCDMDKAAETGAGYGALLTPQGKILFDFLI 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSS 114 K + + ++L+ R+ L+ +L+FY+LR+ V I + + V + ++ + + S+ Sbjct: 61 LK-DGERYLLDTPRAAVADLVKRLVFYRLRARVEIADRSEDLAVAALWGTDEAPSGAGSA 119 Query: 115 FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 D R + L RT + + RI G+ + DF FP Sbjct: 120 VRDPRLPVLGFRLVGPREGLARTLAAAGAEDAGEAGWQAHRIRLGVPEAGADFALGDAFP 179 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 HDA MD L+G+S KGCY+GQEVVSR++HR+ R+R + ++G LP +G+PI D + Sbjct: 180 HDADMDQLSGVSFRKGCYVGQEVVSRMEHRSTARRRVVKVSGQQPLPEAGTPITADGRPV 239 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 GTLG G LA+ R+DKV A+ G++L V + + P W + Sbjct: 240 GTLGSSTGGDGLALVRLDKVKAALDNGVSLECGAVPLAVALPEWAR 285 >gi|240141126|ref|YP_002965606.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens AM1] gi|240011103|gb|ACS42329.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens AM1] Length = 284 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 4/275 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGSDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA R+D++ A+ G + G + P + + Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273 >gi|115526383|ref|YP_783294.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisA53] gi|115520330|gb|ABJ08314.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisA53] Length = 293 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 12/281 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + +L+++ IK+ G+ A FL ++T D+ R A+LTPQGKI+ FL++++ Sbjct: 1 MKAAFLADRGVIKISGEEARHFLNGLVTTDMTKAEPGQGRFGALLTPQGKIVADFLLTEL 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115 + F+++ DR+ L KL FYKLR+ V++E + GV+ W+ E SF Sbjct: 61 LAEDGGGFLIDCDRALAQPLATKLNFYKLRAKVLVENLSDRLGVLAIWDGEPSPPPEWSF 120 Query: 116 IDERFSIADVLLH-------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R + +T D Y RI G DF FPH Sbjct: 121 ADPRDASLGWRAPVPVELAAKTAAAIGAEWVDASDYDSHRIACGAPAGGVDFRYGDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A MD L+GI +KGCY+GQEVVSR+ HR R R + I P SGS + +D IG Sbjct: 181 EANMDKLHGIDFSKGCYVGQEVVSRMHHRGTARTRTVRIAFDGAAPMSGSDMFANDKPIG 240 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LG + + LA+ RIDK+ A+ G L V + ++ P Sbjct: 241 HLGSITNGQGLALVRIDKLADAVDAGERLHVGEIALRLLDP 281 >gi|227821430|ref|YP_002825400.1| putative aminomethyltransferase protein [Sinorhizobium fredii NGR234] gi|227340429|gb|ACP24647.1| putative aminomethyltransferase protein [Sinorhizobium fredii NGR234] Length = 282 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ I V GK A LQ ++T D+ L R A+LTPQGKIL FLIS+ Sbjct: 1 MPKLRLDDRVTISVSGKDADALLQGLVTTDIGALADDEVRPGALLTPQGKILFDFLISR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE R + ++L+ +L YKLRS V + + VV+++ +E SS+ D RF Sbjct: 60 DGEALRLETSRDQAEALLKRLTMYKLRSAVELSLLAPAPVVVAFGEER--PESSYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A + + R + + Y LRI G+ D+ FPHD LMDL G+S Sbjct: 118 EKAGIPVFRLYREIAGAGAGAADYDRLRIEAGVATAGRDYALQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +I++G LPP+G+ + IG+LG V + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRVVIVSGQALLPPTGTSLSIHGRPIGSLGTVQDRAGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI KG + V V + P W Sbjct: 238 IVRIDKAGEAIAKGDPILAGDVPVTLTLPGW 268 >gi|150395930|ref|YP_001326397.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] gi|150027445|gb|ABR59562.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] Length = 282 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 107/271 (39%), Positives = 144/271 (53%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M V L ++ I V GK A LQ +IT D+ L R A+LTPQGKIL FL+S+ Sbjct: 1 MPKVCLDGRAIIHVSGKDADTLLQTLITTDIAQLGADEIRPGALLTPQGKILFDFLLSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + LE + ++L+ +L YKLRS V I +Q V + + ++ S+ D RF Sbjct: 60 DGEALRLETTGDQGEALVKRLTMYKLRSAVEISLQSPAPVTVVFGEDA--PAGSYRDHRF 117 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A V + R + + I + LRI GI D+ FPHD LMDL G+S Sbjct: 118 EKAGVSVFRLYRDLPSAEAGIADFDALRIAAGIAVAGRDYALQDAFPHDVLMDLNGGLSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R+R +II G LPP+G+ I + IG+LG + LA Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIIAGEAALPPTGTSISVNGRTIGSLGTARDRNGLA 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I RIDK AI KG + V V + P W Sbjct: 238 IVRIDKAGEAIAKGDTILAGDVPVSLTLPAW 268 >gi|239831501|ref|ZP_04679830.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301] gi|239823768|gb|EEQ95336.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301] Length = 329 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 145/270 (53%), Gaps = 5/270 (1%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+ Sbjct: 49 TVNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDDLKPGALLIPQGKILFDFLVSRIDG 108 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERF 120 ++ S I ++ Y+LR+ I QP + V +SW + S I D RF Sbjct: 109 -GLRFDLPASVAADFIKRITLYRLRAKAEITQQPESLVSVSWQGDSPPSQDDSIKRDSRF 167 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A++ + R +G + +D + +LR HGI + TDF + +FPHD D G+S Sbjct: 168 P-AELNVRRIYGRADGT-TDQSAWTKLRAEHGIAEGETDFAYNDVFPHDVNFDQTGGVSF 225 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC+IGQEVVSR+QHR R+R ++ LPP G+PI D EIGT+G +A Sbjct: 226 PKGCFIGQEVVSRMQHRGTARRRVLVARSEVPLPPMGTPITVDGREIGTMGSSADMVGIA 285 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + RID+V A+ G + V + P Sbjct: 286 LVRIDRVKDAMDAGSTVLAGETPVTLTLPP 315 >gi|15964857|ref|NP_385210.1| hypothetical protein SMc02558 [Sinorhizobium meliloti 1021] gi|15074036|emb|CAC45683.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021] Length = 280 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 107/268 (39%), Positives = 146/268 (54%), Gaps = 3/268 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ + + Sbjct: 2 VCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR-DGE 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF A Sbjct: 61 ALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRFEKA 118 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 V + R + + I LRI GI D+ FPHD LMDL G+S KG Sbjct: 119 GVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSFRKG 178 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 CY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LAI R Sbjct: 179 CYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLAIVR 238 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 IDK AI K A+ VR+ + P W Sbjct: 239 IDKAGEAIAKSEAILAGDVRLTLTLPAW 266 >gi|299134703|ref|ZP_07027895.1| folate-binding protein YgfZ [Afipia sp. 1NLS2] gi|298590513|gb|EFI50716.1| folate-binding protein YgfZ [Afipia sp. 1NLS2] Length = 291 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 13/282 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M S +L+++ +KV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I Sbjct: 1 MKSAFLTDRGVVKVGGEDARHFLNGLVTTNIDLVRPGLGRFGALLTPQGKIIADFLVTEI 60 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115 F+L+ +S L +L YKLR+ V IE + GV+ W E + +F Sbjct: 61 PAGHGGGFLLDCPKSLAQPLAARLSIYKLRAKVAIENLSDAFGVLALWGGEPQMTPDLAF 120 Query: 116 IDERFSIAD--VLLHRTWGHNEKIA-----SDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D R VLL + + A D Y RI G DF + FPH Sbjct: 121 ADPRDESLGWRVLLPQEFAGKATTAIGAQMVDETEYEAHRIACGAPRGGIDFAYNDAFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 DA MD L+G+ KGCYIGQEVVSR+QHR R R + + G D +G+P+ + +G Sbjct: 181 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARTRIVRV-GLGDAIAAGTPVTAGEKTLG 239 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 T G G + LA+ RID+V A++ G + G + P Sbjct: 240 TFGSSAGDRGLALLRIDRVADAVEAGTPVLADGHPLSFIAPQ 281 >gi|153009949|ref|YP_001371164.1| glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC 49188] gi|151561837|gb|ABS15335.1| Glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 142/269 (52%), Gaps = 5/269 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+ Sbjct: 8 VNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDNLKPGALLAPQGKILFDFLVSRIDG- 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERFS 121 ++ S I ++ Y+LR+ I P + V +SW E S + I D RF Sbjct: 67 GLRFDLPASIAADFIKRITLYRLRAKAEITQLPESLVSVSWQTESHPSQNDSIKRDSRFP 126 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 ++ +HR +G + +D + +LR +GI + TDF + +FPHD D G+S Sbjct: 127 -TELNVHRIYGPADGT-TDESAWTKLRAEYGIAEGETDFAYNDVFPHDVNFDQTGGVSFP 184 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 KGC+IGQEVVSR+QHR R+R ++ +LPP G+ I D EIGT G +A+ Sbjct: 185 KGCFIGQEVVSRMQHRGTARRRVLVAHSDGNLPPMGTSITVDGREIGTTGSSADTIGIAL 244 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPH 270 RID+ AI G + + + P Sbjct: 245 VRIDRAKDAIDAGSPILAGETPITLTLPP 273 >gi|307941575|ref|ZP_07656930.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4] gi|307775183|gb|EFO34389.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4] Length = 298 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + +L+ +S ++V G+ FLQ +ITAD+ + + A+LTPQGKIL FLI + Sbjct: 5 TFAHLTERSVVRVSGEDVHHFLQNLITADMDKIDAAGSGFGALLTPQGKILFDFLIF-AQ 63 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF--SNSSFIDE 118 T++L+ I +L FY+LR+ V IE I + V W + + ++D Sbjct: 64 NGTYLLDTPSQTGADFIKRLTFYRLRAKVAIEDISETHSVFAVWGEAKIDCEPAACWLDP 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPH 168 R ++ L R +G + I + ++ Y RI+ G+ + TDF S+IFPH Sbjct: 124 RVAV---LGQRLYGKADDIKASLESAGATEAGHTAYAAHRISLGVPESLTDFDYSSIFPH 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 DA MD LNG+S +KGCY+GQEVVSR+ HR RKR + +T + LP +G+ I++ DI +G Sbjct: 181 DADMDALNGVSFSKGCYVGQEVVSRVHHRGTARKRFIQVTSDNALPDAGTDIVSGDISVG 240 Query: 229 TLGVVVG-----KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 L K +A+ R+DKV + GV V + P W Sbjct: 241 QLTSSTQLEDGTSKGIALTRLDKVVANRSDETPFSCGGVAVDLAIPDW 288 >gi|114707124|ref|ZP_01440022.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506] gi|114537320|gb|EAU40446.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506] Length = 284 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 102/273 (37%), Positives = 158/273 (57%), Gaps = 8/273 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ +++ G A FLQ ++TA+ TLP +AR SA+LTPQGKIL FL+SK Sbjct: 1 MPYAQLEDRAVLRLSGSDAGTFLQNLVTAETATLPKGVARPSALLTPQGKILFDFLVSKT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ED + +E + RD+L +L YKLR+ V++E P + V + + + + DERF Sbjct: 61 -EDGYRIECAAAIRDALAKRLTLYKLRAKVLVE--PADEPVFALWEAGETPSGAVRDERF 117 Query: 121 SIADVLLHRTWGHNEKI--ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 ++R +G A+D T+ LR+ G+ + TDF + +FPHD L+D G+ Sbjct: 118 --GGGPVYRLYGEPTDAGEAADAATFRTLRLRSGVAEAETDFPQADMFPHDVLLDQNGGV 175 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+QHR R+R M+ +G L G+ + + + +IGTL + Sbjct: 176 SFKKGCYVGQEVVSRMQHRGTARRRLMLASGERHLTE-GANVTSGEAKIGTLLAASERFG 234 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +A+ R DK+ +K G AL + GV ++ + P W Sbjct: 235 IAVVRTDKLASILKSGAALAIDGVPIELTIPSW 267 >gi|254563637|ref|YP_003070732.1| glycine cleavage T protein [Methylobacterium extorquens DM4] gi|254270915|emb|CAX26920.1| Glycine cleavage T protein (aminomethyl transferase) [Methylobacterium extorquens DM4] Length = 284 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 4/272 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119 +D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDAAETAAETVRVRDGR 119 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G + Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGFTGSAAGDRG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA R+D++ A+ G + G + P Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPD 270 >gi|323135653|ref|ZP_08070736.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242] gi|322398744|gb|EFY01263.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242] Length = 273 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 2/266 (0%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L+++ I+V G A FL ++T D+ +L AR +A+LTPQGKIL FL+ Sbjct: 3 TAILLADRGVIEVAGADAGKFLHNLVTNDIASLERGEARFAALLTPQGKILFDFLVFATG 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 E ++L+ S L +L YKLRS + +E + ++ + Sbjct: 63 EGRYLLDCPLSLAADLEKRLNMYKLRSKLTVENRSAELEAGAFPDATEAPKVEALALASD 122 Query: 122 IADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L R KI + + Y RI G+ DF + FPH+A MDLL G+ Sbjct: 123 PRAALGWRAIAEKGKIVALGERGEYDARRIRAGVPLGGVDFTYNDAFPHEADMDLLAGLD 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEVVSR++HR ++RKR D P G I +IEIG G G + L Sbjct: 183 FKKGCYVGQEVVSRMKHRGLVRKRVTPYRAKGDAPAPGETIRAGEIEIGVTGSRAGDEGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVK 265 A+ R+D++ A +KG A GV ++ Sbjct: 243 ALIRLDRLADAKEKGDAPMAGGVALE 268 >gi|319898698|ref|YP_004158791.1| aminomethyltransferase [Bartonella clarridgeiae 73] gi|319402662|emb|CBI76208.1| aminomethyltransferase [Bartonella clarridgeiae 73] Length = 288 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQAIIT DV + + A+L+PQGK++ FLISKI+ Sbjct: 6 NAINLKNRKIIKVTGEEATHFLQAIITTDVKKINSRELFPGALLSPQGKVIADFLISKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 ++ ++++I S D+ +L+ YKLR V I + + W E N SSF D+R Sbjct: 66 QN-YMIDIAASLADAFHKRLILYKLRKKVEITKPSQEIINVFWQNESDNLNFDSSFTDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G + + + +RI++GI + + D+ +FPHD D ++G+ Sbjct: 125 FPKKEKVV-RIYGKIPFLTPECNAHWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCYIGQEV+SR+ HR IR+R +++ L SGS + + LG V +A Sbjct: 184 FFNKGCYIGQEVISRMHHRRTIRRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCVKNEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V A+ K TV V V + Sbjct: 243 LALMRIDHVKEAMDKNFQFTVDNVPVTINIAE 274 >gi|304392057|ref|ZP_07373999.1| glycine cleavage T protein [Ahrensia sp. R2A130] gi|303296286|gb|EFL90644.1| glycine cleavage T protein [Ahrensia sp. R2A130] Length = 283 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 95/274 (34%), Positives = 145/274 (52%), Gaps = 13/274 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + +N++ G+ A FL+ ++T L A+LTPQGKIL F I+ I Sbjct: 13 MSQILHTNRATFSCTGEDATHFLENLVTC----LISGKPAFGALLTPQGKILFDFFITPI 68 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + + +RD LI +L FYKLR+ V ++ P+ V++ + T + +F D R Sbjct: 69 DG-GYRFDCAAEQRDELIKRLGFYKLRAKV--DLAPLEEAVVTSWGDATRPDDAFDDPRL 125 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN---G 177 S L R + + +D + RI G+ + D P ++FPHD MD + G Sbjct: 126 S---ALGWRAYRMQAEAKADDDAWLAHRIALGVPELGVDAEPGSVFPHDMSMDQFSKGSG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 ++ KGCY+GQEVVSR+QHR R R + + +DLP SG+ ++ D IGTLG V G+ Sbjct: 183 VAFDKGCYVGQEVVSRMQHRGTARSRFVNVAAVNDLPESGAELMVGDRTIGTLGSVSGQH 242 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LA+ R+D+ AI +G +T G V + P W Sbjct: 243 GLALVRLDRAAKAITEGAPITADGTEVMLTLPDW 276 >gi|144898986|emb|CAM75850.1| Glycine cleavage T protein (aminomethyl transferase) [Magnetospirillum gryphiswaldense MSR-1] Length = 274 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 8/273 (2%) Query: 1 MSSVYLSN--QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 M + + ++ + V G FLQ +I+ DV + A +A LTPQGK L ++ Sbjct: 1 MPAYQFTRLPRTVLNVAGDDRKTFLQGLISNDVAKIAPGQALWAAFLTPQGKFLWDLFLT 60 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + + DT ++++D + ++ KL YKLRS V I + V + + D Sbjct: 61 E-QGDTVLIDVDAATAEAFRKKLSLYKLRSKVTITTTDL-AVFAVFGGDGALPEGVAADT 118 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R L+ + + + + R G+ D D + + D L+G+ Sbjct: 119 RLPAMGGRLYASQPPADMAEVPLAAWDAWRFAQGVPDGARDLIVDKSLLLENGFDELSGV 178 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQE+ +R ++R ++RKR + ++ P G+P+L ++E G + Sbjct: 179 DFNKGCYMGQELTARTKYRGLVRKRLLPVSFDGAAPEVGTPVLVGEVEAGKMRSGGDGAG 238 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 LA+ R++ ++ G LT G + + P W Sbjct: 239 LAMIRLEH----LRAGTPLTCGGKALAVTVPAW 267 >gi|49474072|ref|YP_032114.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse] gi|49239576|emb|CAF25933.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse] Length = 288 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 102/272 (37%), Positives = 149/272 (54%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ + IKV G+ A FLQ++IT DV + + A+L+PQGK+L FLI K + Sbjct: 6 NAICFKKRKVIKVTGEEATDFLQSLITTDVTKIAPQEIFPGALLSPQGKVLADFLIGKRD 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 +D ++++I S D+L +LLFYKLR V I V +SWN E N SSFID+R Sbjct: 66 DD-YLIDIVSSLADTLYKRLLFYKLRKKVEISQPFQELVTISWNNESNNFNFDSSFIDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ RT+G A D ++ LRI + I + D+ IFPHD D ++G+ Sbjct: 125 FPQKEKIV-RTYGEIPFSAPDYNKNWNRLRIRYAIAESGQDYEIGKIFPHDINYDQISGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCYIGQE+VSR+ HR+ R+R +I+ +L S S + +G LG +A Sbjct: 184 SFNKGCYIGQEIVSRMHHRHTARRRVLIVKSQHEL-TSESTVEAGTKVLGHLGTCAANEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V A+ + TV V S Sbjct: 243 LALMRIDHVKDAMNNNITFTVENTPVTISIAE 274 >gi|296446345|ref|ZP_06888290.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b] gi|296256118|gb|EFH03200.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b] Length = 280 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 8/277 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KI 60 S+ LS++ ++V G A FL I+T DV +L AR +A+LTPQGKI+ F+I K Sbjct: 3 SATLLSDRGVVEVAGPDAAKFLHGILTNDVNSLAAGEARFAALLTPQGKIITDFMIFAKA 62 Query: 61 EEDT--FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SS 114 ED F+L+ + +++L+D+L FYKLR+ V + + +++ + + Sbjct: 63 AEDGLVFLLDCPAALKETLLDRLKFYKLRAAVTLTDRSGEFASVAFPEAAEKPEIDAIAL 122 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 D R +A+ + Y RI D DF FPH+A MD Sbjct: 123 AADPRAPTLGWRGLVAKALAVTVATAPRALYDAKRIAAAAPDGGIDFDYGDAFPHEANMD 182 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L G+ KGC++GQEVVSR++HR +RKR P G+P+ ++EIG G Sbjct: 183 RLAGVDFKKGCFLGQEVVSRMKHRGPVRKRVTTFHAQGPAPAPGTPVKAGEVEIGVTGSA 242 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 VG + LA+ R+D++ A G G+ + S P Sbjct: 243 VGGEGLALIRLDRLADAKSGGAVPLAGGIALDFSVPE 279 >gi|298293892|ref|YP_003695831.1| folate-binding protein YgfZ [Starkeya novella DSM 506] gi|296930403|gb|ADH91212.1| folate-binding protein YgfZ [Starkeya novella DSM 506] Length = 282 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 128/273 (46%), Gaps = 5/273 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++ ++ G A FL ++TA T AR SA+LTPQGKI+ ++ Sbjct: 1 MPIAILKERAVARIAGADAAHFLDNLLTA--RTPEPGEARYSALLTPQGKIVADMIVVAT 58 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDER 119 E F L++ R L+ +L Y+LR+ V I + V ++W ++ ++ D R Sbjct: 59 EG-GFRLDVPRLAVPDLVKRLQLYRLRAKVEIGVLDDLVVAVAWGGSSPLVDAFAYDDPR 117 Query: 120 FSIADVLLHRTWGHNEKIA-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 G +IA +H RI G+ + DFL FPH+A MD L GI Sbjct: 118 LPELGRRFLLPAGEASQIAMVPEAQWHAHRIALGVPEGGMDFLYGDAFPHEADMDQLGGI 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY+GQE+VSR+QHR R R + P G+PIL IG LG V +A Sbjct: 178 DFDKGCYVGQEIVSRMQHRGTARTRIIPFALCGPSPAEGTPILAGGKSIGRLGSGVEGRA 237 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 L + R+D+++ A + G + P W Sbjct: 238 LGLVRLDRLEEARAARHVIEADGAALVPERPDW 270 >gi|306845268|ref|ZP_07477844.1| folate-binding protein YgfZ [Brucella sp. BO1] gi|306274427|gb|EFM56234.1| folate-binding protein YgfZ [Brucella sp. BO1] Length = 329 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 48 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 107 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 108 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQSDSPASDNDSIKRDSR 166 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 167 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 224 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G L Sbjct: 225 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDAPLPPMGTPITVDGREIGAMGSSANHIGL 284 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 285 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 315 >gi|256113206|ref|ZP_05454074.1| aminomethyltransferase [Brucella melitensis bv. 3 str. Ether] gi|265994614|ref|ZP_06107171.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether] gi|262765727|gb|EEZ11516.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether] Length = 287 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 139/271 (51%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 TKGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FTKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|329888212|ref|ZP_08266810.1| aminomethyltransferase folate-binding domain protein [Brevundimonas diminuta ATCC 11568] gi|328846768|gb|EGF96330.1| aminomethyltransferase folate-binding domain protein [Brevundimonas diminuta ATCC 11568] Length = 262 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 13/271 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS L +++ I+V G A PFL ++T DV TL R A+L+P G++L I Sbjct: 1 MSIARLDSRALIRVSGPDARPFLHNLLTQDVETLQPGELRFGALLSPPGRLLFDLFIW-G 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 EED +L++ +RD+L+ +L YKLR+ V + P + V ++W + D R Sbjct: 60 EEDGVVLDVAAERRDALVQRLSLYKLRAQVEVMPIP-DAVFVAWGVD--VPEGFVADPRL 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R WG + + + R+ G+ DP D L +P +A DLLNGI Sbjct: 117 P---GLGGRRWGDQSETDAVEADWQAHRLTLGVPDPTQDALMDKTYPIEADFDLLNGIDF 173 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC+IGQE SR++ R I+ R M IT P G +L ++ G + +A+A Sbjct: 174 HKGCFIGQETTSRMKRRGTIKNRMMAITFEGPAPERGVEVLKGELRAGEVMTGAEGRAIA 233 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + R+D++D LTV G V+ P W Sbjct: 234 LMRLDRMDGD------LTVEGRPVRVEKPDW 258 >gi|225627165|ref|ZP_03785203.1| folate-binding protein YgfZ [Brucella ceti str. Cudo] gi|261315117|ref|ZP_05954314.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] gi|225618000|gb|EEH15044.1| folate-binding protein YgfZ [Brucella ceti str. Cudo] gi|261304143|gb|EEY07640.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] Length = 316 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 35 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 94 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 95 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 153 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 154 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 211 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 212 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 271 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 272 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 302 >gi|306842068|ref|ZP_07474740.1| folate-binding protein YgfZ [Brucella sp. BO2] gi|306287818|gb|EFM59241.1| folate-binding protein YgfZ [Brucella sp. BO2] Length = 287 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGDEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G + L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVDGREIGAMGSSANQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|254718807|ref|ZP_05180618.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] gi|265983789|ref|ZP_06096524.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] gi|264662381|gb|EEZ32642.1| glycine cleavage T-protein barrel [Brucella sp. 83/13] Length = 287 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADAAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|17987565|ref|NP_540199.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M] gi|256044363|ref|ZP_05447267.1| aminomethyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|260563715|ref|ZP_05834201.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|265990778|ref|ZP_06103335.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str. Rev.1] gi|17983269|gb|AAL52463.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260153731|gb|EEW88823.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|263001562|gb|EEZ14137.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str. Rev.1] Length = 287 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|306837527|ref|ZP_07470402.1| folate-binding protein YgfZ [Brucella sp. NF 2653] gi|306407419|gb|EFM63623.1| folate-binding protein YgfZ [Brucella sp. NF 2653] Length = 286 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 5 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 65 G-GLRFDLPADAAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 123 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 124 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 181 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G L Sbjct: 182 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIGL 241 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 242 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 272 >gi|197104040|ref|YP_002129417.1| aminomethyltransferase [Phenylobacterium zucineum HLK1] gi|196477460|gb|ACG76988.1| aminomethyltransferase [Phenylobacterium zucineum HLK1] Length = 268 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 13/273 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ V L++++ I V G FLQ ++T DV TL AR A+LTPQG++L Sbjct: 1 MTIVQLTSRAVIAVGGPEWRSFLQGLLTQDVETLQPGQARFGALLTPQGRLLYDLFAV-G 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ED +L+++ + RD+L+ +L Y+LR+ V + P V ++ D R Sbjct: 60 AEDGCLLDVEAAHRDALLQRLTMYRLRAKVELS-APDTAVFAAFPDA--PGPGWIRDPRR 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R +G E+ SD Y R+ G+ D+ + +P +A DLL GI Sbjct: 117 PE---LGWRGYGLAERATSDEAAYDAHRLRLGVP-GPADWGTDSTYPIEADFDLLAGIDF 172 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQE SR++ R I+ R + I P SG+ IL D+ G + +A+A Sbjct: 173 KKGCFVGQETTSRMKRRGQIKSRMLPIVFEGPPPASGTEILAGDLRAGEVLSGTEGRAMA 232 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + R+D+ G LT G V+ P W++ Sbjct: 233 LVRLDRAL-----GADLTADGRPVRVEPPAWFE 260 >gi|225852188|ref|YP_002732421.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457] gi|256264302|ref|ZP_05466834.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|225640553|gb|ACO00467.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457] gi|263094575|gb|EEZ18373.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|326408688|gb|ADZ65753.1| folate-binding protein YgfZ [Brucella melitensis M28] gi|326538413|gb|ADZ86628.1| folate-binding protein YgfZ [Brucella melitensis M5-90] Length = 287 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 8/275 (2%) Query: 1 MSS---VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 M++ V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+ Sbjct: 2 MTASKMVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLV 61 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI- 116 S+IE ++ + ++ Y+LR+ I P + V + W + S++ I Sbjct: 62 SRIEG-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIK 120 Query: 117 -DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D RF +L H + + + +LR +GI + DF +FPHD D Sbjct: 121 RDSRFPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQT 178 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 G+S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G Sbjct: 179 GGVSFPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSAS 238 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + LA+ RID+V A+ G ++ + S P Sbjct: 239 QIGLALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|90420870|ref|ZP_01228775.1| putative aminomethyltransferase [Aurantimonas manganoxydans SI85-9A1] gi|90334845|gb|EAS48617.1| putative aminomethyltransferase [Aurantimonas manganoxydans SI85-9A1] Length = 288 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 3/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +S + V G++A FLQ ++TAD+ +L R A+LTPQG+IL FLI K Sbjct: 1 MPYARLPERSLLAVTGEAAHHFLQNLVTADLDSLADGEMRPCALLTPQGRILFEFLIGK- 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++ S L +L Y+LR+ + IE + V+ W + + + D RF Sbjct: 60 QADGLRIDVAASAAADLKKRLTLYRLRTKIGIESSDLP-VLAVWEEPDLTAAELYADRRF 118 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ E I + Y RI GI + TD+ S +FPHD L D G+S Sbjct: 119 PEGEMARLYGAPPAELIEASPDDYRLRRIRGGIAEAETDYPGSDVFPHDVLFDQNGGVSF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGC++GQEVVSR+QHR R+R M++ G L P GS I IGT+ G + Sbjct: 179 RKGCFVGQEVVSRMQHRGTARRRLMLLAGERHLTP-GSNIEAGGKTIGTVLSADGTEGFG 237 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 RID++ A+ +G L+ GV V A+ P W Sbjct: 238 FLRIDRLAGALSRGEELSADGVPVTATIPPW 268 >gi|23501554|ref|NP_697681.1| aminomethyltransferase [Brucella suis 1330] gi|62289627|ref|YP_221420.1| aminomethyltransferase [Brucella abortus bv. 1 str. 9-941] gi|82699555|ref|YP_414129.1| glycine cleavage T protein (aminomethyl transferase) [Brucella melitensis biovar Abortus 2308] gi|148560194|ref|YP_001258651.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840] gi|161618637|ref|YP_001592524.1| glycine cleavage T-protein barrel [Brucella canis ATCC 23365] gi|254688942|ref|ZP_05152196.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|254693424|ref|ZP_05155252.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|254697077|ref|ZP_05158905.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|254701454|ref|ZP_05163282.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|254704000|ref|ZP_05165828.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|254707626|ref|ZP_05169454.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M163/99/10] gi|254709792|ref|ZP_05171603.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|254713794|ref|ZP_05175605.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|254717149|ref|ZP_05178960.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|254729973|ref|ZP_05188551.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|256031282|ref|ZP_05444896.1| glycine cleavage T-protein barrel [Brucella pinnipedialis M292/94/1] gi|256060794|ref|ZP_05450956.1| glycine cleavage T-protein barrel [Brucella neotomae 5K33] gi|256257190|ref|ZP_05462726.1| glycine cleavage T-protein barrel [Brucella abortus bv. 9 str. C68] gi|256369104|ref|YP_003106612.1| aminomethyltransferase, putative [Brucella microti CCM 4915] gi|260168420|ref|ZP_05755231.1| aminomethyltransferase, putative [Brucella sp. F5/99] gi|260545618|ref|ZP_05821359.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260566753|ref|ZP_05837223.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260754429|ref|ZP_05866777.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|260757648|ref|ZP_05869996.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|260761475|ref|ZP_05873818.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|260883457|ref|ZP_05895071.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68] gi|261213675|ref|ZP_05927956.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|261218964|ref|ZP_05933245.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|261317327|ref|ZP_05956524.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|261321537|ref|ZP_05960734.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|261324785|ref|ZP_05963982.1| glycine cleavage T-protein [Brucella neotomae 5K33] gi|261751994|ref|ZP_05995703.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|261754653|ref|ZP_05998362.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|261757881|ref|ZP_06001590.1| glycine cleavage T protein [Brucella sp. F5/99] gi|265988365|ref|ZP_06100922.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1] gi|294852030|ref|ZP_06792703.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026] gi|297248038|ref|ZP_06931756.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str. B3196] gi|23347465|gb|AAN29596.1| aminomethyltransferase, putative [Brucella suis 1330] gi|62195759|gb|AAX74059.1| aminomethyltransferase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615656|emb|CAJ10643.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella melitensis biovar Abortus 2308] gi|148371451|gb|ABQ61430.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840] gi|161335448|gb|ABX61753.1| Glycine cleavage T-protein barrel [Brucella canis ATCC 23365] gi|255999264|gb|ACU47663.1| aminomethyltransferase, putative [Brucella microti CCM 4915] gi|260097025|gb|EEW80900.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260156271|gb|EEW91351.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260667966|gb|EEX54906.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292] gi|260671907|gb|EEX58728.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str. 86/8/59] gi|260674537|gb|EEX61358.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870] gi|260872985|gb|EEX80054.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68] gi|260915282|gb|EEX82143.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str. Tulya] gi|260924053|gb|EEX90621.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1] gi|261294227|gb|EEX97723.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1] gi|261296550|gb|EEY00047.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94] gi|261300765|gb|EEY04262.1| glycine cleavage T-protein [Brucella neotomae 5K33] gi|261737865|gb|EEY25861.1| glycine cleavage T protein [Brucella sp. F5/99] gi|261741747|gb|EEY29673.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513] gi|261744406|gb|EEY32332.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686] gi|264660562|gb|EEZ30823.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1] gi|294820619|gb|EFG37618.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026] gi|297175207|gb|EFH34554.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str. B3196] Length = 287 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|189023880|ref|YP_001934648.1| glycine cleavage T protein (aminomethyl transferase) [Brucella abortus S19] gi|189019452|gb|ACD72174.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella abortus S19] Length = 286 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 5 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 65 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 123 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 124 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 181 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 182 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 241 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 242 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 272 >gi|114328650|ref|YP_745807.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] gi|114316824|gb|ABI62884.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] Length = 278 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 7/271 (2%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S L +++ + V G+ + FLQ +++ DV A +A+LTPQGK + F I + Sbjct: 8 SALLPHRAVLAVTGEDRVTFLQGLVSNDVTLTAPGQAIWAAMLTPQGKWIADFFIF-SDG 66 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L+++ ++ LI KL ++LR+ V I + V W + S + + Sbjct: 67 QRLLLDVEATQAAMLIQKLSRFRLRARVAISAESDLHVHAGWGSAPIPAGSVCVAPDPRL 126 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + G D Y R++ G+ D + D +A D LNGIS TK Sbjct: 127 PEAGWRALTGAGILPEGDAAAYDTHRLSLGLPDGSADLEAEKTVLLEAGFDELNGISWTK 186 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQE+ +R ++R ++++R + +TG LPP +P++ D E+GT+ GK LAI Sbjct: 187 GCYMGQELTARTRYRGLLKRRLVPVTGHAPLPPRETPLMQDGKEVGTMRSSRGKTGLAIL 246 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 R++ + ++ G + + W + Sbjct: 247 RLEALHAPVQAG------DQSLTPAPAPWMR 271 >gi|319405464|emb|CBI79083.1| Aminomethyltransferase [Bartonella sp. AR 15-3] Length = 288 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 8/273 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATHFLQALITTDVTKINSQELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNS--SFIDE 118 ++ ++++I S D+ +L+ YKL + I QP+ ++ + W E N SFID+ Sbjct: 66 QN-YMIDITASLADAFHKRLILYKLHKKIEI-TQPLQEIINVFWQNELDSLNFNLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ RT+G + + + +RI++GI + + D+ +FPHD D ++G Sbjct: 124 RFPEKEKVV-RTYGKTPFLIPEYNIYWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCYIGQEV+SRI HR R+R +++ L SGS + + LG + Sbjct: 183 LFFNKGCYIGQEVISRIHHRRTARRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCAKNE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 ALA+ RID V A++K + TV + V S Sbjct: 242 ALALMRIDHVKEAMEKNLQFTVDDIPVTISIAE 274 >gi|121602749|ref|YP_988794.1| aminomethyltransferase [Bartonella bacilliformis KC583] gi|120614926|gb|ABM45527.1| aminomethyltransferase [Bartonella bacilliformis KC583] Length = 286 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 151/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ I V G+ A FLQ +IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAISLKNRKIINVIGEEATHFLQMLITTDVTKIGPQELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119 + ++++I S D+ +LL YKL + + +Q I + L + SFID+R Sbjct: 66 Q-GYMIDIAESLADTFQKRLLLYKLHKKIEVTQPLQTITTIFLENEINTSKFTLSFIDKR 124 Query: 120 FSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ RT+G +A D +H +RI + I + D+ T+FPHD D + G+ Sbjct: 125 FPENEKII-RTYGETPFLAPKDNDNWHRMRIRYAITESGQDYEIGTVFPHDINYDQIGGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEVVSR+ HR I R+R +I+TG L P GS I + +G LG + +A Sbjct: 184 SFNKGCYVGQEVVSRMHHRKIARRRFLIVTGQHYLTP-GSTIEASNKTLGKLGTCIANEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V A+ K TV+ + V S Sbjct: 243 LALMRIDHVKDAMDKDSQFTVNNLPVTISIAE 274 >gi|163842938|ref|YP_001627342.1| glycine cleavage T-protein barrel [Brucella suis ATCC 23445] gi|163673661|gb|ABY37772.1| Glycine cleavage T-protein barrel [Brucella suis ATCC 23445] Length = 287 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEVDFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVTLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|182677705|ref|YP_001831851.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC 9039] gi|182633588|gb|ACB94362.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC 9039] Length = 291 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 8/275 (2%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +L+++ +K+ G A L +IT +L AR SA+LTPQGK+L F I + E Sbjct: 5 TCFLADRGVLKIVG-DATALLHKVITNTMLNFVPGEARYSALLTPQGKLLFDFFILPLPE 63 Query: 63 D---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI-- 116 ++++ + + L+ ++ F+K+R+ +E + GV W + + + Sbjct: 64 GPEAGYLIDCAKEQSADLLKRINFHKMRAKFTVEDVSEQFGVAAFWGSDPAPAIEGAVIY 123 Query: 117 -DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R L + + +D Y R++ G+ DF F HDA +D Sbjct: 124 LDPRAPEMGKRLIASRAALAALPADTTAYEAHRVSLGVPKGGVDFPYGDTFLHDANIDRC 183 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NG+ KGCY+GQEVV+R+ R RKR + + P G+ I + IG + G Sbjct: 184 NGVDFKKGCYVGQEVVARVHFRRSARKRIIPLHFEGPTPALGTEIKAGETSIGQVSSTAG 243 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ R+D+++ A G + V+A P Sbjct: 244 AAGLAMLRLDRLEDARTAGTPVKAGEAVVEAFVPA 278 >gi|170750384|ref|YP_001756644.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM 2831] gi|170656906|gb|ACB25961.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM 2831] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 126/270 (46%), Gaps = 2/270 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A LQ ++T +V TL AR A+LTPQGKIL FLIS+I Sbjct: 1 MPVALLPDRALVTVTGPDATTLLQGVLTCNVETLRPGEARLGALLTPQGKILFDFLISRI 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D F ++ + L +L Y+LR+ I P V +W + + D R Sbjct: 61 P-DGFRFDVLADRAADLAKRLTLYRLRAQATIAADPTVAVAAAWAGATPPAAEAVADTRA 119 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L+ G A++ YH RI G+ + DF FPH+ALMD L G+ Sbjct: 120 VDLGARLYAAAGAFSADAAE-ADYHAHRIALGVPEGGRDFAFGDAFPHEALMDQLGGVDF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R R + D P G+ I +GT G G + LA Sbjct: 179 RKGCYVGQEVVSRMQHRGTARTRILAAAYPDAAPAPGTEITAGGKVLGTAGSAAGNRGLA 238 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270 R+D++ A+ G V P Sbjct: 239 TIRLDRLGDALAAGETPRAGDRPVTLERPA 268 >gi|23015098|ref|ZP_00054885.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 300 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 25/290 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V+L ++ ++V G+ FLQ +++ D+ + A + +LTPQGK L + ++ D Sbjct: 7 VHLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVFTGLLTPQGKFLYDLFVVELG-D 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQE-------H 108 F++E + ++ + L KL YKLRS V I + GV +++ E Sbjct: 66 VFLIEAEAARLEDLRKKLSMYKLRSKVTIAVASNMAVFGLMGEGVAAAFDLEPQAGAATE 125 Query: 109 TFSNSSFIDERFSIADVL-------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 S F+D R + + R N+ + ++ E RI G+ D + D Sbjct: 126 FAGGSVFVDPRLAEGGLRALLPVDGGPRVLEANDFKPAPFHSWDEARIRLGLPDGSRDLE 185 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + + LNG+ KGCY+GQE+ +R ++R +++KR M + +P G+ I Sbjct: 186 VDKALLLENGFEELNGVDFNKGCYMGQELTARTKYRGLVKKRLMPVEVNGPMPAPGTVIH 245 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + E G + G LA+ R+D+ + GM TV R+ A+ P W Sbjct: 246 LGEAEAGEMRSACGHAGLALIRLDQWRAS--GGMGFTVGTARLDAAKPKW 293 >gi|256159392|ref|ZP_05457174.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] gi|256254690|ref|ZP_05460226.1| glycine cleavage T-protein barrel [Brucella ceti B1/94] gi|261221868|ref|ZP_05936149.1| glycine cleavage T-protein [Brucella ceti B1/94] gi|265997832|ref|ZP_06110389.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] gi|260920452|gb|EEX87105.1| glycine cleavage T-protein [Brucella ceti B1/94] gi|262552300|gb|EEZ08290.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1] Length = 287 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 89/271 (32%), Positives = 137/271 (50%), Gaps = 5/271 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119 ++ + ++ Y+LR+ I P + V + W + S++ I D R Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 F +L H + + + +LR +GI + DF +FPHD D G+S Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGC+IG EVVSR+QHR R+R +I LPP G+PI + EIG +G + L Sbjct: 183 FPKGCFIGHEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ RID+V A+ G ++ + S P Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273 >gi|319404024|emb|CBI77612.1| Aminomethyltransferase [Bartonella rochalimae ATCC BAA-1498] Length = 288 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKINSRELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119 ++ ++++I S D +L YKL + I +Q + V + + ++ N SF+D+R Sbjct: 66 QN-YMIDIVASLADVFHKRLTLYKLHKKIEITEPLQEVINVFWNNDLDNLNFNLSFVDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G+ Sbjct: 125 FPKKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCYIGQEV+SR+ HR R+R +++ L SGS I LG V +A Sbjct: 184 FFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTIKAGTKIFSQLGTCVKNEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V AI K + TV + V + P Sbjct: 243 LALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274 >gi|319407037|emb|CBI80674.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 288 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 94/273 (34%), Positives = 153/273 (56%), Gaps = 8/273 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKIKSRELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQ--EHTFSNSSFIDE 118 ++ ++++I S D +L Y+L + I I+P+ V+ + WN ++ N SFID+ Sbjct: 66 QN-YMIDIVASLADVFHKRLALYRLHKKIEI-IEPLQEVINVFWNNSLDNLNFNLSFIDK 123 Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 RF + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G Sbjct: 124 RFPEKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHG 182 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCYIGQEV+SR+ HR R+R +++ L SGS + LG V + Sbjct: 183 LFFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTVKAGTKIFSQLGTCVKNE 241 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 ALA+ RID V AI K + TV + V + P Sbjct: 242 ALALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274 >gi|296116365|ref|ZP_06834980.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769] gi|295977065|gb|EFG83828.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 12/274 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEE 62 YL +++ + V GK + FLQ +++ D+ T+ A +A L+ QGK L F + Sbjct: 5 AYLPDRAVLAVSGKDRVSFLQGLVSNDMTTVTPDRAAWTAFLSAQGKWLADFFVFADPHG 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDERF 120 + +L+ D ++ +L +L Y+LR++V I V W+ D R Sbjct: 65 ERLLLDCDATQAATLRTRLSRYRLRTDVDISETG-YAVHAQWDGTAPADERFPGSADPRL 123 Query: 121 SIADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 D+ GH + +D Y R++ G+ D D +A D LNGIS Sbjct: 124 P--DIGWRMLLGHVAPDVTADALDYDRHRLSLGLPDGVRDCESGKTLLLEANFDQLNGIS 181 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 TKGCY+GQE+ +R ++R ++R+ + + G DLP +PI+ D ++G + + + Sbjct: 182 WTKGCYMGQELTARTRYRGLVRRHLLPVEGAHDLPEPATPIMHDGHKVGEIRSSRDQAGM 241 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 A+ R + LT G V P W++ Sbjct: 242 AMIRSSHIHTP-----GLTAAGHPVSIRVPPWFR 270 >gi|330994708|ref|ZP_08318631.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp. SXCC-1] gi|329758349|gb|EGG74870.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 10/272 (3%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L +++ + V G + FLQ +++ D+ T+ A +A L+ QGK L F + E Sbjct: 5 AHLPDRAVLAVSGADRVSFLQGLVSNDMTTVAPGHAVWTAFLSAQGKWLADFFVLADPEG 64 Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERF 120 +++ DR++ D L +L Y+LR+ V I V +W T + D R Sbjct: 65 VRLLVDCDRAQADMLRQRLSRYRLRAQVEIGETG-YAVHAAWGSGFTPPAGYPAAPDPRL 123 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 A + + A D+ Y R+ G+ D D +A D LNGIS Sbjct: 124 PDAGWRVLLGHPAPDASADDV-DYDRHRLALGLPDGARDCESDRTLLLEANFDQLNGISW 182 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TKGCY+GQE+ +R ++R ++R+ + + +LP G+P+++ D +G + +A Sbjct: 183 TKGCYMGQELTARTRYRGLVRRHLLPVMAGRELPTPGTPVMSGDTAVGEMRSSRDSAGMA 242 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + R + + L G + P W+ Sbjct: 243 MIRNEHIHD-----TDLVAGGHALHVRVPQWF 269 >gi|221233328|ref|YP_002515764.1| aminomethyltransferase family protein [Caulobacter crescentus NA1000] gi|220962500|gb|ACL93856.1| aminomethyltransferase family protein [Caulobacter crescentus NA1000] Length = 281 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 13/269 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L++++ I V G FLQ ++T DV TL R + +LTPQGK+L ++ E Sbjct: 24 LARLASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGKLLYDLFVA-GAE 82 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D +L++ + RD+++ +L Y+LR+ V + + V+ + T + D R Sbjct: 83 DGALLDVAAAHRDAILTRLSMYRLRAKVEL-VASDRPVIAVFGGA-TSGEGLYADPRLPA 140 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + + +D Y R+ G+ TD+ +P +A DLL GI K Sbjct: 141 LGARAY----DDRATNADEDVYEAHRLALGVP-GPTDWGSEATYPIEANFDLLAGIDFKK 195 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GC++GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ Sbjct: 196 GCFVGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALL 255 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271 R+D+++ G+ALTV G V+ P W Sbjct: 256 RLDRIE-----GVALTVEGRPVRVERPDW 279 >gi|258542812|ref|YP_003188245.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01] gi|256633890|dbj|BAH99865.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01] gi|256636949|dbj|BAI02918.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-03] gi|256640002|dbj|BAI05964.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-07] gi|256643058|dbj|BAI09013.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-22] gi|256646113|dbj|BAI12061.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-26] gi|256649166|dbj|BAI15107.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-32] gi|256652153|dbj|BAI18087.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655210|dbj|BAI21137.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-12] Length = 291 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 13/275 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L N++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ F + +D Sbjct: 8 TRLKNRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDD 67 Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDE 118 T +L+ + ++L L ++LRS+V ++I + V ++W S SF D Sbjct: 68 TCLLLDCATEQVENLKTTLQRFRLRSDVQLDITALP-VHVAWGNPPPDSVLENAISFRDP 126 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R A L + I + + Y+ R+ G+ D D +A +DLL G+ Sbjct: 127 RLEEAGWRLI-DAAPDTLITATEQGYNLHRLVLGLPDGVQDCEVGRTLAAEANLDLLGGV 185 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEV +R+ +R ++++R M + T LP G+P+L D +E+GTL Sbjct: 186 SWKKGCYMGQEVTARMHYRTLVKRRLMPVAATSPLPAPGTPVLCDGVEVGTLRSSQDHVG 245 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA+ + D ++ LT + P W + Sbjct: 246 LALLKTDAANN------QLTCAAHPLVVRLPAWQE 274 >gi|329114590|ref|ZP_08243349.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001] gi|326696070|gb|EGE47752.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001] Length = 291 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 13/275 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ F + +D Sbjct: 8 TRLEKRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDD 67 Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDE 118 T +L+ + ++L L ++LRS+V +E+ + V ++W S SF D Sbjct: 68 TCLLLDCATEQAENLKTTLRRFRLRSDVQLELTALP-VHVAWGNPPPDSVLENAISFRDP 126 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R A L I + + Y+ RI G+ D D +A +DLL G+ Sbjct: 127 RLEDAGWRLIDAAPDTP-ITATEQDYNLHRIILGLPDGVQDCEVGRTLAAEANLDLLGGV 185 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQEV +R+ +R ++++R M I T LP G+ +L + +E+GTL Sbjct: 186 SWKKGCYMGQEVTARMHYRTLVKRRLMPIAATSPLPAPGTSVLCNGVEVGTLRSSQDHVG 245 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA+ + + ++ LT + P W + Sbjct: 246 LALLKTEAANN------QLTCAEHPLVVRLPTWLE 274 >gi|16124640|ref|NP_419204.1| aminomethyltransferase [Caulobacter crescentus CB15] gi|13421542|gb|AAK22372.1| aminomethyltransferase, putative [Caulobacter crescentus CB15] Length = 263 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 13/269 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L++++ I V G FLQ ++T DV TL R + +LTPQGK+L ++ E Sbjct: 6 LARLASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGKLLYDLFVA-GAE 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D +L++ + RD+++ +L Y+LR+ V + + V+ + T + D R Sbjct: 65 DGALLDVAAAHRDAILTRLSMYRLRAKVEL-VASDRPVIAVFGGA-TSGEGLYADPRLPA 122 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + + +D Y R+ G+ TD+ +P +A DLL GI K Sbjct: 123 LGARAY----DDRATNADEDVYEAHRLALGVP-GPTDWGSEATYPIEANFDLLAGIDFKK 177 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GC++GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ Sbjct: 178 GCFVGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALL 237 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271 R+D+++ G+ALTV G V+ P W Sbjct: 238 RLDRIE-----GVALTVEGRPVRVERPDW 261 >gi|300023505|ref|YP_003756116.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC 51888] gi|299525326|gb|ADJ23795.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC 51888] Length = 298 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 22/273 (8%) Query: 1 MSSV---YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 MSSV L+++ ++V G + LQ+++T ++ L AR + +L+PQGKIL F I Sbjct: 1 MSSVKIARLTDRGVVRVDGADSEKLLQSLVTNEIEGLNAGEARFAGLLSPQGKILFDFFI 60 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS-- 114 + E ++L++ +K L+ +L YKLR++V I + P V W+ ++ Sbjct: 61 VRT-EMGYLLDVAAAKAADLVKRLTMYKLRADVTITDASPGFAVYAVWDDGAAALTATRA 119 Query: 115 ---FIDERFSIADVLLHRTWGHNEKIASDIK-------TYHELRINHGIVDPNTDFLPST 164 F D R V W +D + Y LR+ G+ + DF Sbjct: 120 CVHFNDPRHPAMGVR----WLMQSPPPADAQVVELAHIDYDALRVRLGVPEAGKDFEFGD 175 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 +PH+A DL NG+S TKGCY+GQE+V+R+Q++ ++RKR + I+ T L SG+ I D Sbjct: 176 AYPHEADYDLFNGVSFTKGCYVGQEIVARMQNKTVVRKRVVKISATAPLI-SGAEIHLGD 234 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + IG +G V G LA+ R+D+ A K L Sbjct: 235 VAIGRVGTVDGLHGLAMVRLDRAIEAQDKNQRL 267 >gi|162149036|ref|YP_001603497.1| aminomethyltransferase protein (glycine cleavage) [Gluconacetobacter diazotrophicus PAl 5] gi|209545215|ref|YP_002277444.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl 5] gi|161787613|emb|CAP57209.1| putative aminomethyltransferase protein (glycine cleavage) [Gluconacetobacter diazotrophicus PAl 5] gi|209532892|gb|ACI52829.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl 5] Length = 291 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 9/269 (3%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KIEE 62 +L +++ + + G + FLQ +++ DV + A +A LTPQGK F + + + Sbjct: 22 AFLPDRAVLAISGADRVSFLQGLVSNDVAAVAPGQAVWTAFLTPQGKWQADFFLFAEADG 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + +L+ + ++ D L +L Y+LRS+V I+ V +W +S+ + Sbjct: 82 ERLLLDCEAAQADMLRQRLARYRLRSDVSIDPTG-FAVHAAWGAVPPMLDSAIGAPDPRL 140 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 A+ A+D Y R+ G+ D + D +A + LNGIS TK Sbjct: 141 AEAGWRLILPRPTPDAADHAAYDAHRLALGLPDGSRDCEEGKTLLLEANFEALNGISWTK 200 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQE+ +R ++R ++R++ + ++G LPP G+P++ + E G + + LA+ Sbjct: 201 GCYMGQELTARTRYRGLVRRKLLPVSG-AALPPPGTPLMHGEKEAGIMASSRDGRGLAML 259 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271 R+D + LT G V+ P W Sbjct: 260 RLDH------RSAELTAEGHSVQVHIPSW 282 >gi|295687807|ref|YP_003591500.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756] gi|295429710|gb|ADG08882.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756] Length = 264 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 13/268 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++++ I V G FLQ ++T DV TL R S +LTPQGK+L ++ ED Sbjct: 7 ARLTSRAVIAVSGPDWRSFLQGLLTQDVETLAPGELRFSGLLTPQGKLLYDLFVAGT-ED 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L++ + RD+L+ +L Y+LR+ V +E + + D R Sbjct: 66 GALLDVQAAHRDALLQRLSMYRLRAKVTLEASDRPVSAVFGG--AVAGQGLYADPRLPAL 123 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + + +D Y R+ G+ D+ +P +A DLL GI KG Sbjct: 124 GARAY----DDRAANADEDAYDAHRLALGVP-GPADWGEEKTYPIEANFDLLAGIDFKKG 178 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C++GQE SR++ R I+ R + IT P G+ +L ++ G + +ALA+ R Sbjct: 179 CFVGQETTSRMKRRGTIKNRMLPITFDGPPPAFGAEVLAGELRAGEVLGGRDGRALALLR 238 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 +D++D G LTV G V P W Sbjct: 239 LDRID-----GADLTVDGRPVAVDRPAW 261 >gi|220920725|ref|YP_002496026.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060] gi|219945331|gb|ACL55723.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060] Length = 276 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 89/270 (32%), Positives = 135/270 (50%), Gaps = 4/270 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L++++ + + G A FLQ +IT +V TLP AR A+L PQGKIL FL+S+ Sbjct: 1 MPIASLTDRAVLALTGDDAPGFLQGLITCNVETLPPDEARLGALLAPQGKILFDFLLSRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D F L+ R+ L+ +L Y+LR+ V P+ V +W E S D R Sbjct: 61 G-DGFHLDAPRAVLPDLMRRLTLYRLRARVAFAQTPLR-VFAAWGAE--PEGSWLRDGRL 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L+ G + + + + RI G+ + DF FPH+ALMD L G+ Sbjct: 117 PALGWRLYAPEGGEPAVDATPEAFQAHRIALGVPESGADFALGDAFPHEALMDQLGGVDF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEVVSR+QHR R R + + P+G+P+ +G G G + L Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPLLYPGAAVPAGTPVTAGARALGQTGSAAGDRGLG 236 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + R+D++ A+ G + G+ V+ + P Sbjct: 237 LLRLDRLADAVAAGERVEAGGLSVRVAKPD 266 >gi|154251204|ref|YP_001412028.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] gi|154155154|gb|ABS62371.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] Length = 316 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 19/280 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--KIEED 63 LS + ++V G A FLQ ++T +V A +A+LTPQGK LL F I+ ++D Sbjct: 26 LSKRGVLRVAGPEARSFLQGLVTNNVDLATGMTAIYAALLTPQGKFLLDFFIAADPADKD 85 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF--SNSSFIDERF 120 +L+ D ++ ++L+ +L YKLR+ V IE + V+ WN++ + F D R Sbjct: 86 AVLLDCDGARAEALMKRLTMYKLRAKVTIEDLSEKLAVLALWNEDGSPLTEGPGFADPRL 145 Query: 121 SIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 G K S K YH LRI HG+ D DF P FP + + Sbjct: 146 PGMGRRAILASGEVGKAISAAKAREAGEDEYHRLRIMHGVGDAAQDFEPDRTFPLEVNIA 205 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV- 232 LNGI KGC++GQEV SR + R +RKR + D+PP G+ + E+GT+ Sbjct: 206 ELNGIDFHKGCFVGQEVTSRTKRRGSVRKRLLPAHVEGDMPPHGTQVKGVAREVGTILSG 265 Query: 233 -VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + LA+ R+D + +G L ++ P W Sbjct: 266 DAETSRVLALLRLD-----LIRGSVLEAGYAEIRPEVPSW 300 >gi|163793647|ref|ZP_02187622.1| Glycine cleavage T protein (aminomethyl transferase) [alpha proteobacterium BAL199] gi|159181449|gb|EDP65964.1| Glycine cleavage T protein (aminomethyl transferase) [alpha proteobacterium BAL199] Length = 302 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 27/297 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L ++ F+++ G + FLQ +++ DV + A A LT QGK L F + + Sbjct: 6 YYFLQSRGFLRIDGPDRVAFLQGLVSNDVTKVTTDRAGYGAFLTAQGKFLFDFFMV-ADG 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110 D +L+ + + D +L YKLRS + + V+ + Sbjct: 65 DALVLDTEGDRVDDFFKRLRMYKLRSKIELSQGGYRAAVVLGEEALAALGLPADRGVATP 124 Query: 111 --SNSSFIDERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTDFL 161 +++D R + + ++ + A+ ++ Y R+ G+ D + D Sbjct: 125 FGGGVAYVDPRHAEMGARVLLPASADDGVLSVAGPSAASLEPYDRQRVALGLADGSRDMA 184 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 +A + L G+ KGCY+GQE+ +R ++R ++++R + IT LP G+ I Sbjct: 185 IEKTVLLEAGFEELGGVDFDKGCYMGQELTARTKYRGLVKRRLLPITINGPLPAPGTLIT 244 Query: 222 TDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 D E G + V V LA+ R+++++ A + GM L V AS P W K Sbjct: 245 LDGREAGEVRSVIPNGDVNGTGLAMIRLNRLEEAFQAGMPLMAGESTVIASRPAWAK 301 >gi|240850203|ref|YP_002971596.1| aminomethyltransferase [Bartonella grahamii as4aup] gi|240267326|gb|ACS50914.1| aminomethyltransferase [Bartonella grahamii as4aup] Length = 290 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K Sbjct: 6 NAICLKNRGLIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGKK- 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 E+ ++++I D+L +LL YKLR V I V +S N E N SSFID+R Sbjct: 65 ENGYLIDIRMPLADTLHQRLLLYKLRKKVEITQPLQELVTVSLNNESDALNFDSSFIDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G + S+ T+++LRI + I + D+ +FPHD D +NGI Sbjct: 125 FPQKEKII-RIYGKKPFLTSEYHDTWNQLRIRYAIAESGQDYEVGKVFPHDINYDQINGI 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCYIGQE+VSR+ HR R+R I+ G +L P S I +G LG V +A Sbjct: 184 SFNKGCYIGQEIVSRMHHRRAARRRIFIVKGQCELTPQ-SSIEAGTKVLGYLGTCVENEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V ++ + TV + V + Sbjct: 243 LALMRIDHVKDSMDHNIPFTVKNIPVTINIAE 274 >gi|254512369|ref|ZP_05124436.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] gi|221536080|gb|EEE39068.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] Length = 245 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 12/252 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + N+ +++ GK FLQ +IT D+ L + +A+LTPQGK L F + K + Sbjct: 1 MPNRRILRLTGKDTDSFLQGLITNDIERLADGL-VYAALLTPQGKYLADFFL-KRDGKGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++D + D LI +L YKLR++V IE +N + D R S Sbjct: 59 LLDVDEALADGLIKRLTMYKLRADVTIEATDLN----LQRGTGAAPEGALPDPRHSD--- 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + + D + +R+ I + + P + ++ D LNG+ KGCY Sbjct: 112 LGWRAYSGAPE-SDDGSDWDAIRVRLCIPETGIELTPDSYI-LESGFDALNGLDFKKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK ++ T P G+ IL+ +G L G +A+A R D Sbjct: 170 VGQEVTARMKHKTELRKGLRVVEVTGSAP-VGTEILSGGKPVGILFTQSGNRAIAYLRFD 228 Query: 246 KVDHAIKKGMAL 257 + ++ G A+ Sbjct: 229 RAGGDMQAGDAV 240 >gi|260797653|ref|XP_002593816.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae] gi|229279046|gb|EEN49827.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae] Length = 441 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 19/289 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKI 60 V L +S ++V G IPFLQ ++T DV +L A + IL QG++L L+ + Sbjct: 147 KCVRLEERSLVRVAGSDTIPFLQGLVTNDVTSLNTENRALYTMILNVQGRVLYDVLMYNL 206 Query: 61 E-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFS--- 111 + + +LE D + SLI L YK+R V I + V Sbjct: 207 QSSPTSPPSLLLECDHTVVPSLIKLLKMYKIRKKVDICSVADEYTVWALLPGTSDPPVFV 266 Query: 112 ---NSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 S D R + G N + + YH R G+ + D Sbjct: 267 SDTGLSVTDPRLPDLGNRVVLKSGTNLVFDCVEGTSTDYHTHRYQLGVGEGVNDLPTGNC 326 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTD- 223 P ++ + +LNG+S KGCY+GQE+ +R H +IRKR M I +GS + + Sbjct: 327 TPLESNLAILNGVSFDKGCYVGQELTARTHHTGVIRKRLMPIILDRPASLEAGSTLTNEK 386 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +G G +A+ R+ + + V +KA P W+ Sbjct: 387 GKNVGKFRHAQGVHGIALVRLAHSQEKLYCKQE-SGEEVGLKAETPKWW 434 >gi|163737689|ref|ZP_02145106.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter gallaeciensis BS107] gi|161389215|gb|EDQ13567.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter gallaeciensis BS107] Length = 246 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +SN+ +++ G FLQ +IT DV + + +A+LTPQGK L F ++ E D Sbjct: 1 MSNRRILRLSGDDTRDFLQGLITNDVTKVDQGL-VYAAMLTPQGKYLADFFVA-AEGDDL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++D S SL +L Y+LR+ V IE + + D R Sbjct: 59 LVDVDESLAPSLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD--- 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G D ++ +R+ H I + + P + +A + LNG+ KGCY Sbjct: 112 LGWRMYGAQP--GDDGSDWNAIRVAHCIPETGIELGPDSYI-LEAGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK +T + P G+ I D +GTL G +A+A R D Sbjct: 169 VGQEVTARMKHKTTLRKGLATVTVEGEAP-IGTEIRRADKPVGTLFTQAGDQAIAYLRFD 227 Query: 246 KVDHAIKKGMA 256 + + A Sbjct: 228 RAGADMCAQNA 238 >gi|167648315|ref|YP_001685978.1| folate-binding protein YgfZ [Caulobacter sp. K31] gi|167350745|gb|ABZ73480.1| folate-binding protein YgfZ [Caulobacter sp. K31] Length = 293 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 33/292 (11%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L +++ I V G FL ++T +V TL R + +LTPQG++L ++ Sbjct: 9 LAHLDSRAVIAVSGPDWKSFLNGLLTQEVETLAPGELRFAGLLTPQGRLLHDLFVA-GAT 67 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSS---- 114 D +L++ RD+++ +L Y+LR+ V + P++ L + Sbjct: 68 DGALLDVAADHRDAILARLTMYRLRAKVELAASPLDVFSQFSALPGEGPGPDPEAGSAPD 127 Query: 115 ---------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 F D R L R + + + + Y R+ G+ D Sbjct: 128 ESGSRPSPGRADHGWFADPRLPS---LGARAYAQDLPVTASEDDYDAHRLAQGVP-GPAD 183 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + +P +A DLLNGI KGC++GQE SR++ R I+ R + I P G+ Sbjct: 184 WGTDRTYPIEANFDLLNGIDFKKGCFVGQETTSRMKRRGTIKTRMLPIAFDGPPPAFGTE 243 Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +L ++ G + +A+A+ R+D+V+ G ALTV G V P W Sbjct: 244 VLAGELRAGEVLSGRDGRAMALLRLDRVE-----GAALTVDGRPVSVERPDW 290 >gi|217977284|ref|YP_002361431.1| folate-binding protein YgfZ [Methylocella silvestris BL2] gi|217502660|gb|ACK50069.1| folate-binding protein YgfZ [Methylocella silvestris BL2] Length = 279 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 7/273 (2%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED- 63 +L+++ ++V G A FLQ +IT VL + +R SA+L+PQGK++ F + + E Sbjct: 7 FLADRGVVRVLGAEAEKFLQRLITNSVLAIAPGESRFSALLSPQGKLMFDFFVVPLPEGP 66 Query: 64 --TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + + R++ L+ +L +K+R+ + IE V + S + R Sbjct: 67 EAGYYFDCVRAQAPDLVKRLNLHKMRAKISIEDLSETLGVAALIAGEAPSGIGALVYRDM 126 Query: 122 IADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 A + R E + SD Y RI G+ DF+ F D +D LNG Sbjct: 127 RAPGMGERVIASREALERISDSDESAYEARRIAAGVPRGGRDFVYGDAFVQDVNLDWLNG 186 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + KGCY+GQEVV+R+ +R +KR + + + P G I +G +G + G + Sbjct: 187 VDFKKGCYVGQEVVARVHYRKSAKKRIVKFSFEGEPPAPGVEIAAGGPPLGQVGSISGSE 246 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ R+D+++ A G + + + P Sbjct: 247 GLAMIRLDRLEDAKAAGAVVKAGETPIAVAAPE 279 >gi|224044548|ref|XP_002192875.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 320 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 25/294 (8%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLI 57 ++ + ++ + V G A FLQ ++T DV L A + L QG+ L ++ Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRLLAEGDAPRALYAHALNAQGRCLYDVIL 82 Query: 58 SKI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF- 115 EE +LE D S DS+ L YK+R V I P + + + Sbjct: 83 YSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLPKCAD 142 Query: 116 ------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFLPS 163 D R + L G N D++ YH R GI + D P Sbjct: 143 QALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQGIPEGVKDLPPG 202 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP---- 219 P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + ++ + LP +G P Sbjct: 203 VALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLLPVSFPEPLPAAGLPEGAE 262 Query: 220 -ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + GT G+ +A+ R+ + + + L H V++ A+ P W+ Sbjct: 263 ILTAAGKRAGTFRAGGGELGIALLRLAHLGEPLC--IPLGAHRVKLHAATPQWW 314 >gi|30424663|ref|NP_776146.1| putative transferase C1orf69 homolog, mitochondrial precursor [Mus musculus] gi|81899610|sp|Q8CAK1|CAF17_MOUSE RecName: Full=Putative transferase CAF17 homolog, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|26332703|dbj|BAC30069.1| unnamed protein product [Mus musculus] gi|63102308|gb|AAH94909.1| RIKEN cDNA A230051G13 gene [Mus musculus] gi|74223337|dbj|BAE21556.1| unnamed protein product [Mus musculus] gi|123262723|emb|CAM17098.1| novel protein (4930543L23Rik) [Mus musculus] Length = 358 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL + T ++ P A + L QG+ L Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E +F+LE D S +L L YK+R V +E P V Sbjct: 109 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 168 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 S ++ ++ER + R ++ A D++ YH+ R G Sbjct: 169 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 288 Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LP SG + G G LA+ R + + + + V V A Sbjct: 289 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 347 Query: 267 SFPHWY 272 P W+ Sbjct: 348 VVPDWW 353 >gi|163740727|ref|ZP_02148120.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] gi|161385718|gb|EDQ10094.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] Length = 246 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +SN+ +++ G FLQ +IT DV + + +A+LTPQGK L F ++ E D Sbjct: 1 MSNRRILRLSGADTRDFLQGLITNDVTKVDQGL-VYAAMLTPQGKYLADFFVA-AEGDDL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++D S SL +L Y+LR+ V IE + + D R Sbjct: 59 LVDVDESLAASLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD--- 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G D ++ +R+ H I + + P + +A + LNG+ KGCY Sbjct: 112 LGWRMYGAQP--GDDGSDWNAIRVAHCIPETGIELGPDSYI-LEAGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK +T + G+ I D +GTL G +A+A R D Sbjct: 169 VGQEVTARMKHKTTLRKGLATVTVEGE-AAIGTEIRRADKPVGTLFTQAGDQAIAYLRFD 227 Query: 246 KVDHAIKKGMA 256 + + A Sbjct: 228 RAGADMCAQNA 238 >gi|195144438|ref|XP_002013203.1| GL23521 [Drosophila persimilis] gi|194102146|gb|EDW24189.1| GL23521 [Drosophila persimilis] Length = 340 Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 38/302 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLIS 58 + L+++ I+V G +PFLQ ++T DV L + + L G++L ++ Sbjct: 32 TLEKLAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYAMFLNKGGRVLYDTIVY 91 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------- 104 + E DT++LE DR + L +++R I++ I+ + W Sbjct: 92 RTESPDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYVPWVLFNTEKCGEQVG 149 Query: 105 -----NQEHTFSNSSFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHELRIN 150 N+E SS D R L R S + Y LR Sbjct: 150 EKLQRNKEWELFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSERNYQLLRYK 207 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T Sbjct: 208 QGVGEGSEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT 267 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 L + + +G + +A+ RI++V + L V G R A P Sbjct: 268 APLGANQTVQSIAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELVVDGERCFAERPD 324 Query: 271 WY 272 W+ Sbjct: 325 WW 326 >gi|148675734|gb|EDL07681.1| RIKEN cDNA A230051G13 [Mus musculus] Length = 370 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL + T ++ P A + L QG+ L Sbjct: 61 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 120 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E +F+LE D S +L L YK+R V +E P V Sbjct: 121 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 180 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 S ++ ++ER + R ++ A D++ YH+ R G Sbjct: 181 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 240 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 241 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 300 Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LP SG + G G LA+ R + + + + V V A Sbjct: 301 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 359 Query: 267 SFPHWY 272 P W+ Sbjct: 360 VVPDWW 365 >gi|125775558|ref|XP_001358983.1| GA20785 [Drosophila pseudoobscura pseudoobscura] gi|54638724|gb|EAL28126.1| GA20785 [Drosophila pseudoobscura pseudoobscura] Length = 340 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 38/298 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLISKIE- 61 L+++ I+V G +PFLQ ++T DV L + + L G++L ++ + E Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYALFLNKGGRVLYDTIVYRTES 95 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104 DT++LE DR + L +++R I++ I+ W Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYAPWVLFNTQKCGEKVGEKLQ 153 Query: 105 -NQEHTFSNSSFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHELRINHGIV 154 N+E + SS D R L R S Y LR G+ Sbjct: 154 RNKERKWFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSENNYQLLRYKQGVG 211 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T L Sbjct: 212 EGSEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLTAPLG 271 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + + +G + +A+ RI++V + L V G R A P W+ Sbjct: 272 ANQTVQSLAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELMVDGERCFAERPDWW 326 >gi|302384135|ref|YP_003819958.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC 15264] gi|302194763|gb|ADL02335.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC 15264] Length = 265 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 15/268 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L++++ I+V G A PFL ++T DV T+ R A+L+P G++L + E D Sbjct: 6 AHLTSRALIRVSGTDAKPFLHNLLTQDVETIADGEVRFGAMLSPPGRLLFDLFLW-GEAD 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L++ +R +LI +L YKLR+ V I + SW + +D R S Sbjct: 65 GVVLDVAADRRAALIQRLSMYKLRAQVEIA-ADERPALASWPG---VAAGFVVDPRTSAM 120 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 R G + A++ + R++ G+ DP D +P +A DLLNGI KG Sbjct: 121 GG---RAIGDHVPDATE-ADHDAHRLSVGVPDPAADAGSDRTYPIEANFDLLNGIDFQKG 176 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C++GQE SR++ R I+KR + +T P +G+ +L + G + A+A+ R Sbjct: 177 CFVGQETTSRMKRRGEIKKRMLPLTFDGAAPAAGTEVLNGALRAGEVLTGRDGAAMALVR 236 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 +D++D L V G V +P W Sbjct: 237 LDRLDG------PLMVEGRPVAVLYPEW 258 >gi|74192523|dbj|BAE43049.1| unnamed protein product [Mus musculus] Length = 358 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL + T ++ P A + L QG+ L Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E +F+LE D S +L L YK+R V +E P V Sbjct: 109 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 168 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 S ++ ++ER + R ++ A D++ YH+ R G Sbjct: 169 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELAARTHHTGVIRKRLFPVKLEGP 288 Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LP SG + G G LA+ R + + + + V V A Sbjct: 289 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 347 Query: 267 SFPHWY 272 P W+ Sbjct: 348 VVPDWW 353 >gi|195445833|ref|XP_002070506.1| GK10994 [Drosophila willistoni] gi|194166591|gb|EDW81492.1| GK10994 [Drosophila willistoni] Length = 353 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 34/302 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ ++T DV L + + L G++L +I Sbjct: 41 TLEQLKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIY 100 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI 116 + +T++LE DR L +++R + I+ + + + + Sbjct: 101 RTNNPETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHA 160 Query: 117 -----------DERFSIADVLLHRT------------WGHNEKIASDIKT---YHELRIN 150 D R + W +NE +A+ Y LR Sbjct: 161 THNLPELFVASDPRLPSLGTRVLAPTDISWAKLVKGFWQNNEVVATPATADNNYQLLRYK 220 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T Sbjct: 221 QGVGEGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT 280 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 L + + +G + + +A+ RI++V + LTV G R A P Sbjct: 281 APLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPE 337 Query: 271 WY 272 W+ Sbjct: 338 WW 339 >gi|157818919|ref|NP_001102297.1| hypothetical protein LOC363611 [Rattus norvegicus] gi|293351521|ref|XP_002727760.1| PREDICTED: hypothetical protein [Rattus norvegicus] gi|149052766|gb|EDM04583.1| rCG34648 [Rattus norvegicus] Length = 358 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 76/306 (24%), Positives = 119/306 (38%), Gaps = 36/306 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ T P A + L QG+ L Sbjct: 49 TCFRLDGRALMRVRGPDASPFLLGLLTNELPLSGPPAGATQPSARAAYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E F+LE D S +L L YK+R V +E P V Sbjct: 109 DVIVYGLPECTEEAPGFLLECDSSVLGTLQKYLTMYKIRRKVAVEPHPELHVWAVLPCAP 168 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 S ++ ++ER + R + A D++ YH R G Sbjct: 169 QTSEAAPLEERVEATTMLIRDPRTARMGWRLLTQDGGPAVVPRGQLGDLQDYHIYRYQQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 288 Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LP SG + G G LA+ R + + + + V V A Sbjct: 289 LPASGISPGTLVTVTATGQAAGKFRAGQGHIGLALLRSETIKGPLHIKTS-ESQLVAVTA 347 Query: 267 SFPHWY 272 P W+ Sbjct: 348 MVPDWW 353 >gi|254419445|ref|ZP_05033169.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas sp. BAL3] gi|196185622|gb|EDX80598.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas sp. BAL3] Length = 272 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 20/276 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M LS+++ I + G+ A PFL ++T DV TL R A+L+P G++L I Sbjct: 1 MPIARLSSRALISITGEEARPFLHNLLTQDVETLGDGELRFGALLSPPGRLLFDLFIL-G 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E + +L++ +R++LI +L YKLR+ V + V +W D R Sbjct: 60 EAEGVLLDVAAERREALIQRLSMYKLRAKVQVA-ADDRPVFAAWPDA---PAGFIFDPRT 115 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + L+ + A Y + R++ G+ DP D I+P +A DLLNGI Sbjct: 116 PLMGGRLYGEAAADATEA----DYDQHRLSVGVPDPTADAPQDKIYPIEADFDLLNGIDF 171 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----G 235 KGC++GQE SR++ R I+ R + I PP G+ +L ++ G + G Sbjct: 172 QKGCFVGQETTSRMKRRGAIKNRMLAIDFDGPPPPFGAEVLKGELRAGEVLSGRQRSDGG 231 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 A+A+ RID++D LTV G V+ P W Sbjct: 232 GSAMALLRIDRLDGD------LTVEGRPVRLRKPSW 261 >gi|254464189|ref|ZP_05077600.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I] gi|206685097|gb|EDZ45579.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I] Length = 244 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S++ +++ G A FLQ ++T +V L + +A+LTPQGK + F ++ + D Sbjct: 1 MSDRRILRLSGSDAKSFLQGLVTNNVDRLGDGL-VYAALLTPQGKYIADFFLA-ADGDAV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++D + L+ +L Y+LR++V +E+ + + + D R Sbjct: 59 LLDVDAPLAEGLLKRLNMYRLRADVQVEMTELQ----VKRGTGAAPDGALEDPRHPAMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L+ G D + +R+ H I + + P + +A + LNG+ KGCY Sbjct: 115 RLYGLEG-----GDDGSDWDAIRVAHCIPETGVELGPESYI-LEAGFEALNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + P G+ I GTL G K +A R D Sbjct: 169 VGQEVTARMKHKTELRKGFRTVEVEGAAP-VGTEITAGGKPAGTLFTQSGGKGIAYLRFD 227 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 228 RAKGEMQAGDA 238 >gi|195453713|ref|XP_002073908.1| GK12899 [Drosophila willistoni] gi|194169993|gb|EDW84894.1| GK12899 [Drosophila willistoni] Length = 353 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 76/302 (25%), Positives = 124/302 (41%), Gaps = 34/302 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ ++T DV L + + L G++L +I Sbjct: 41 TLEQLKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIY 100 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN---- 112 + +T++LE DR L +++R + I+ + + + + Sbjct: 101 RTNNPETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHA 160 Query: 113 -------SSFIDERFSIADVLLHRT------------WGHNEKIASDIKT---YHELRIN 150 D R S + W ++E +A+ Y LR Sbjct: 161 THNLPELFVAADPRLSSLGTRVLAPTDISWAKLVKGFWQNSEVVATPATADNNYQLLRYK 220 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T Sbjct: 221 QGVGEGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT 280 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 L + + +G + + +A+ RI++V + LTV G R A P Sbjct: 281 APLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPE 337 Query: 271 WY 272 W+ Sbjct: 338 WW 339 >gi|254476830|ref|ZP_05090216.1| aminomethyl transferase family protein [Ruegeria sp. R11] gi|214031073|gb|EEB71908.1| aminomethyl transferase family protein [Ruegeria sp. R11] Length = 246 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G A FLQ +IT DV + + +A+LTPQGK L F + E D Sbjct: 1 MTTRRILRLTGSDARDFLQGLITNDVAKVDQGL-VYAALLTPQGKYLADFFVF-AEGDDL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++D S SL +L Y+LR++V I + + +D R D Sbjct: 59 LIDVDESLAASLAKRLSMYRLRADVQISDTDLQ----VKRGTGPAPEGALMDPRH---DA 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G D + +R+ H I + P + +A + LNG+ KGCY Sbjct: 112 LGWRLYGTEG--GDDGSNWDAIRVAHCIPQTGIELGPDSYI-LEAGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + + P SGS I + +GTL G +A R D Sbjct: 169 VGQEVTARMKHKTELRKGLVTVAVSGSAP-SGSEIRRAEKPVGTLFTTEGAHGIAYLRYD 227 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 228 RAGDDMQAGEA 238 >gi|303227895|ref|NP_001026129.2| chromosome 1 open reading frame 69 [Gallus gallus] Length = 332 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 34/296 (11%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL--------PYKIARGSAILTPQGKILLYFLISKI 60 ++ + V G A FLQ ++T DV L A + L QG+ L ++ ++ Sbjct: 33 RALLSVRGAEAAVFLQGLLTNDVTRLVAAGEGPAGPPRALYAHALNVQGRCLYDLIVYRL 92 Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 EE +LE D S D++ L YK+R V I + E S + Sbjct: 93 HESQEEEPHILLECDSSVLDAIQKHLKLYKIRRKVSISPCLDLSLWAVVPGEQAGDISRY 152 Query: 116 --------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFL 161 D R + L G N +++ YH R GI + D Sbjct: 153 ADRALVLTPDPRAEVMGWRLIIKAGANLPEIIPGSRIENVQDYHRHRYKQGIPEGVKDLP 212 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PSG 217 P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P G Sbjct: 213 PGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPEG 272 Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + ILT+ G + +A+ R+ V+ + +A V++ AS P W+ Sbjct: 273 AEILTESGKAAGKFRAGGDELGIALLRLANVNEPLCLNVA--GDKVKLTASIPEWW 326 >gi|260433135|ref|ZP_05787106.1| aminomethyl transferase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416963|gb|EEX10222.1| aminomethyl transferase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 245 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S + +++ G FLQ +IT D+ L + +A+LTPQGK + F + K + + Sbjct: 1 MSTRRIVRLTGADTDSFLQGLITNDIRKLDDGL-VYAALLTPQGKYIADFFL-KRDGNGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ D+LI +L YKLRS V I+ + + + D R Sbjct: 59 LLDVAEDLADTLIKRLGMYKLRSEVSIDETDL----HLQHGTGPAPQGAQPDPRHPD--- 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + R + + D + +R+ H I + + P T +A + LNG+ KGCY Sbjct: 112 MGWRAYSPAPET-DDGTDWDAIRVRHCIPESGIELTPETYI-LEAGFERLNGVDFKKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + G + P G+ I++DD GTL G KA+A R+D Sbjct: 170 VGQEVTARMKHKTQLRKGL-QVVGIEGAAPVGTQIMSDDKPAGTLFTQSGGKAIAHLRLD 228 Query: 246 KVDHAIKKGMA 256 + ++ A Sbjct: 229 RAGPDMRAADA 239 >gi|301619957|ref|XP_002939357.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 319 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 26/294 (8%) Query: 3 SVYLSNQ-SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 L+ + +++ G FLQ +IT DV L A + +L QG+ L ++ ++ Sbjct: 22 CCPLTERRGLLQLRGPDPAMFLQGLITNDVQRLAEG-ALYAHLLNVQGRSLFDVILYRLP 80 Query: 62 ED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL----SWNQEHTFSN 112 + +LE D + + L Y R VII P V S Q+ + Sbjct: 81 TEHSETSAILLECDVAAVGPIQKHLSLYNFRRKVIICPCPELSVWAVISGSQKQDTQMPD 140 Query: 113 -----SSFIDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFL 161 D R L G N E Y + R G+ + D Sbjct: 141 LPSSVICAADPRVEAMGFRLVAQSGENPKKLLPETETGSYNEYTKHRYEQGVPEGVQDIP 200 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--PSGSP 219 P P ++ + +NGIS +KGCY+GQE+ +R H IIRKR + I + LP G+ Sbjct: 201 PGVALPLESNLVYMNGISFSKGCYLGQELTARTHHTGIIRKRLLPIRFSTPLPAEAEGAD 260 Query: 220 I-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 I + G G LA+ R+ + + + + V VKAS P W+ Sbjct: 261 ILTSAGKPAGKYRAGHGDIGLALLRMAHIGEELHIKPS-SGSSVSVKASIPEWW 313 >gi|58040450|ref|YP_192414.1| aminomethyltransferase [Gluconobacter oxydans 621H] gi|58002864|gb|AAW61758.1| Aminomethyltransferase [Gluconobacter oxydans 621H] Length = 281 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 11/270 (4%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 YLS+++ + G FLQ +IT DV L A SA+LTPQG+ L F + D Sbjct: 15 YLSHRAVLSFTGTDRASFLQGLITNDVQNLTDTTAVWSALLTPQGRWLSEFFLYATP-DR 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-NSSFIDERFSIA 123 +++ + L+ +L ++LR++V IE P + + + + +S +D R Sbjct: 74 ILMDCPADHAEMLVKRLSRFRLRADVQIENTPFQVITGAEGRAVPETVLTSALDPRCEGT 133 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 T + + E R+ G+ D DF +A MDLL+G+S KG Sbjct: 134 GWRAVVT--EPAQGGETPAAFLERRLTLGLPD-VMDFESEQTLALEADMDLLHGVSWKKG 190 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 CY+GQE+ +R +R ++++R + + P G I++ + E+G + G +ALA+ Sbjct: 191 CYMGQELTARTHYRGLVKRRLLPVVLSEGTFPNEGGVIVSGEREVGDIRSRSGNRALAML 250 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 R D LT +G + +P W+ Sbjct: 251 RRDAWSA-----SDLTCNGQPLSVVWPVWF 275 >gi|198424567|ref|XP_002123278.1| PREDICTED: similar to CG8043 CG8043-PA [Ciona intestinalis] Length = 329 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 17/280 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++++ +++ GK I LQ ++T DV LP + +L QG+I LI + Sbjct: 35 AKLNHRAVVQLGGKDTIEHLQGLVTNDVTLLPSSKCMYAMMLNTQGRIDHN-LILHWNDG 93 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSN-----SSFI 116 +++ D S+ D + L YKLR V I + + SWN+ + + + Sbjct: 94 EVLIDCDESRADIFMKLLKRYKLRKKVEILERNDLNIWQSWNESCSNVMPDVKHHVCANP 153 Query: 117 DERFSIADVLLHR-TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R + + ++ + + K YH R G+ + + D P P ++ +D + Sbjct: 154 DPRVKLMGWRVVSCDQPCDDVMMTSSKDYHIWRYKVGVPETDIDLPPGKSLPLESNLDFM 213 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT-DDIEIGTLGVV 233 +GI+ KGCY+GQE+ +R H ++RKR + + +P G+ + + ++ G L V Sbjct: 214 HGINFHKGCYLGQELTARTHHTGVVRKRLIPVEILEGKVPEPGTSLRSENNKSAGRLRGV 273 Query: 234 VGK-KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 VG LA+ ++D + T G ++K P W+ Sbjct: 274 VGGKHGLALIKLDYEGQILT-----TSGGTKLKGQRPLWW 308 >gi|297717822|gb|ADI50054.1| folate-dependent protein [Candidatus Odyssella thessalonicensis L13] Length = 293 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 31/295 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S+ LS+++ ++V G FLQ +I+ DV L ++A + +L+PQG+ LI + Sbjct: 3 LSACLLSHRALVRVTGNDKATFLQGLISNDVNKLSPEVALFALLLSPQGRYQFD-LILHL 61 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------- 107 E + ++LE+D ++ SLI +L ++LRSNV E+ ++ W +E Sbjct: 62 EGEDWLLEVDAARALSLIKRLSVFRLRSNVTFEVVEDRAILAVWGEEVASCLSLEGGLGE 121 Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNT 158 T ++ +D R L E+I + Y R GI + Sbjct: 122 TQATSWGTAVLDPRLIALGARLIIRSEDVEQICHQYGIKLCSVSDYRYHRYQLGIPEGGE 181 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 + P + MD LN I KGCY+GQE+ +R ++R ++RKR + Sbjct: 182 EIEVDRAIPLEWGMDELNAIDWNKGCYMGQELTARTRYRGLVRKRIFPVYAPGITLEQ-- 239 Query: 219 PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 PIL + E+G LA+ R++ +D LT G + P W K Sbjct: 240 PILAAETEVGHWIAKEQDWGLAMVRLNAID------AQLTCDGQVLTIICPSWMK 288 >gi|196002527|ref|XP_002111131.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens] gi|190587082|gb|EDV27135.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens] Length = 325 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 25/294 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + L +S +++ G A FLQ +IT D+ T A + +L P+G+IL L+ K Sbjct: 31 IECAPLLERSLLRISGPDAATFLQGLITNDINTTEP--ASYAMLLNPKGRILYDILLYKN 88 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI- 116 +E+ ++LE D ++ + FYKLRS V I + + + W + + + +F Sbjct: 89 RNDDEEYYLLECDVRVNTAIENHCKFYKLRSKVDI-VNVDQELAVWWAKYNDRESLAFKN 147 Query: 117 -------DERFSIADVLL----HRTWGHNEK--IASDIKTYHELRINHGIVDPNTDFLPS 163 D R + H+ + I + + Y + R+ GI + ++ + Sbjct: 148 EPILRTKDPRLQKLGERIIIPRHKNLSEYAQNLINVNYQEYVDDRMKLGICEGVSEVITG 207 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSP 219 P + +D L+G+ KGCY+GQE+ +R H +IRKR M + D+ GS Sbjct: 208 ESLPLEYNLDYLDGVKFDKGCYLGQELTARTYHTGVIRKRLMPVIFLNPIDDNAAFLGST 267 Query: 220 ILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +L D + G L + GK +A+ RI + V + AS P W+ Sbjct: 268 VLNDKNKNCGKLRALSGKYGVALLRIADSLSGLLSVKTTNNTEVTLTASKPLWW 321 >gi|296230768|ref|XP_002760882.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Callithrix jacchus] Length = 357 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ + L QG+ L Sbjct: 49 TCFRLDERALLRVRGPDAAPFLLGLLTNELPLPGPAAGDAPPPPRAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E F+LE D S + +L L Y++R V +E P V + Sbjct: 109 DVILYGLREHLEEMSGFLLECDSSVQGALQKHLALYRIRRKVTVEQHPDLRVWAVLPRSP 168 Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 ++ + ER + R NE A D+ YH+ R G Sbjct: 169 EAFGAAPLQERAGTDAILIRDPRTPSMGWRLLTQNEGPALVPGGRLGDLWDYHQHRYLQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIGQE+ +R H IIRKR + D Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGIIRKRLFPVRLLDP 288 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 LP SG + +G G LA+ R +K+ + + V + AS Sbjct: 289 LPTSGISPGAEVLTESGQTVGKYRAGQGNVGLALLRSEKIKGPLHIRASKGAQ-VALAAS 347 Query: 268 FPHWY 272 P W+ Sbjct: 348 VPDWW 352 >gi|297661745|ref|XP_002809384.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Pongo abelii] Length = 357 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 125/305 (40%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ A + L QG+ L Sbjct: 49 TCFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ ++E F+LE D S + +L L Y++R V +E P V Sbjct: 109 DVILYGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168 Query: 109 TFSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHG 152 ++ + ER A +L+ R +E A D+ YH+ R G Sbjct: 169 EACGAASLQERAGAATILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDP 288 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 LP SG + + +G G LA+ +K+ + + V + AS Sbjct: 289 LPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347 Query: 268 FPHWY 272 P W+ Sbjct: 348 VPDWW 352 >gi|114573041|ref|XP_514253.2| PREDICTED: putative transferase CAF17, mitochondrial isoform 2 [Pan troglodytes] Length = 356 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 34/304 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ A + L QG+ L Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 ++ ++E F+LE D S + +L L Y++R V +E P V Sbjct: 109 DVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPE 168 Query: 110 FSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHGI 153 ++ + ER A +L+ R +E A D+ YH+ R G+ Sbjct: 169 ACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGV 228 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L Sbjct: 229 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 288 Query: 214 PPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P SG + + +G G LA+ +K+ + + V + AS Sbjct: 289 PTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 347 Query: 269 PHWY 272 P W+ Sbjct: 348 PDWW 351 >gi|56696136|ref|YP_166492.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] gi|56677873|gb|AAV94539.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] Length = 244 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + ++ +++ G FLQ +++ D+ L + +A+LTPQGK L F + + +++ Sbjct: 1 MPSRRILRLSGADTDSFLQGLVSNDIRKLDQGL-VYAALLTPQGKYLADFFLCR-DDEGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L+I S D+ + +L YKLR+ V I +N + D R Sbjct: 59 LLDIAESLADATLKRLSMYKLRAAVEIGDSGLN----LQRGTGPAPAGALPDPRHP---T 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + + D + +R+ H I + + P + ++ + LNG+ KGCY Sbjct: 112 LGWRAYTPAPE-SDDGSDWDAIRVAHCIPETGIELTPDSYL-LESGFEALNGLDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + G+ I D +G L G A+A R D Sbjct: 170 VGQEVTARMKHKTELRKGLARV-AIEGAAEPGTEITADGKPVGVLHTRAGDHAIAYLRFD 228 Query: 246 KVDHAIKKGMA 256 + + G A Sbjct: 229 RAGGEMSAGEA 239 >gi|321463826|gb|EFX74839.1| hypothetical protein DAPPUDRAFT_199709 [Daphnia pulex] Length = 326 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 21/284 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK--IARGSAILTPQGKILLYFLI-SKIEE 62 L ++ +KV G A P+LQ ++T D+ L L QG+IL +I S E Sbjct: 32 LKGRAIVKVSGVDAGPYLQGLMTNDIKHLDEDNNPNMYCMFLNRQGRILYDAIIHSSKES 91 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 ++++E D +SL L +++R V+I I+ + ++Q ++ I R Sbjct: 92 GSYLIECDAECSESLAKHLTMFRVRRKVVISIEETLKPWVLFDQPPEDLSNEVILARDPR 151 Query: 123 ADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 L R + K S + Y ELR G+ + + D P T FP + D Sbjct: 152 VKELGWRVLVDSNKSLSHLIKNLCVDNTDRYTELRYKLGVGEGSPDMPPGTCFPLECNCD 211 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L+G+S KGCY+GQE+ +R H + RKR M + D +G + Sbjct: 212 YLHGVSFHKGCYLGQELTARTYHTGVTRKRLMPVVFQQPSDSIQLESTISDENGQRVGKL 271 Query: 234 VGK-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G L + RI++ L + ++ P W+ Sbjct: 272 RGYLHGSVYGLGLLRIEQAL----SSSQLKIDSNLIETHRPAWW 311 >gi|313236585|emb|CBY19877.1| unnamed protein product [Oikopleura dioica] Length = 308 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 17/275 (6%) Query: 3 SVYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +V LS+ +S I + G+ A LQ +IT D+ L + + S L +G++ ++ + Sbjct: 19 AVDLSDWRSLISIRGEDAKALLQGVITNDISNLQHVGSMYSMFLNAKGRVYFDAILYHLN 78 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN-QEHTFSNSSFIDE 118 ED ++E D+ L L YK+R V I + + VV + + +FID Sbjct: 79 EDEILIEGDKILSAKLKKHLSMYKIRRKVNIHAINESVWHVVPGDDILDLGTLGDTFIDP 138 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R R + ++ YH R GI + + + FP + DL++G+ Sbjct: 139 RLEKMGA---RVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGV 195 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-VGKK 237 S KGCY+GQE+ +R H + RKR + + + P + + G + V Sbjct: 196 SFHKGCYLGQELTARTFHTGVTRKRIVPLKLS---PGNDVSDIKAKRSAGKIITVDSEGN 252 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 LA+ R D D +K V + + P W+ Sbjct: 253 GLAMFRTDNFDKTVK------VGEEEIVITKPSWW 281 >gi|311249489|ref|XP_003123660.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like [Sus scrofa] Length = 354 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 32/298 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISKIE 61 L ++ ++V G + PFL ++T ++ A + L QG+ L ++ + Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNELPLPGSASAVARAGYAHFLNVQGRTLYDVILYGLP 112 Query: 62 E-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 E TF+LE D S D+L L+ +++R V +E P V + S Sbjct: 113 EHSDEQPTFLLECDSSVLDALQRHLVLHRIRRKVTVEPCPELRVWAVLPCAPEEAGRSVP 172 Query: 117 DE----------RFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTD 159 + R + R +E A D++ YH R G+ + D Sbjct: 173 LQEKAQCTTILTRDPRTARMGWRLLSQDEGSALVPGGRPGDLQDYHRHRYQQGVPEGVHD 232 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----P 215 P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + + LP Sbjct: 233 LPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHTGVIRKRLFPVQLSGRLPVGSIA 292 Query: 216 SGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ +LT+ G +G LA+ R +K+ + + V + AS P W+ Sbjct: 293 PGTSVLTESGQAAGKYRAGLGDVGLALLRTEKIKGPLHIRTS-ESGLVALTASVPDWW 349 >gi|58197556|ref|NP_001010867.1| putative transferase C1orf69, mitochondrial precursor [Homo sapiens] gi|74744873|sp|Q5T440|CAF17_HUMAN RecName: Full=Putative transferase CAF17, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|55959201|emb|CAI15071.1| chromosome 1 open reading frame 69 [Homo sapiens] Length = 356 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 34/304 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ A + L QG+ L Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 ++ ++E F+LE D S + +L L Y++R V +E P V Sbjct: 109 DVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPE 168 Query: 110 FSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHGI 153 ++ + ER A +L+ R +E A D+ YH+ R G+ Sbjct: 169 ACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGV 228 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L Sbjct: 229 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 288 Query: 214 PPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P SG + + +G G LA+ +K+ + + V + AS Sbjct: 289 PTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 347 Query: 269 PHWY 272 P W+ Sbjct: 348 PDWW 351 >gi|270006859|gb|EFA03307.1| hypothetical protein TcasGA2_TC013249 [Tribolium castaneum] Length = 336 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 38/302 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEED 63 L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E+ Sbjct: 27 PLNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSEN 86 Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS------- 114 T+++E D D L L Y++R + I + + ++ ++ NS+ Sbjct: 87 NTYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPP 146 Query: 115 -------------FIDERF--------SIADVLLHRTWGHNEKI--ASDIKTYHELRINH 151 + D R + +DV + G N + S K Y LR + Sbjct: 147 LETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSL 206 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + + Sbjct: 207 GVGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK 266 Query: 212 -DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 I+ +++ +G L + G LA RI K + + GV V S P Sbjct: 267 IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLG---DGVAVT-SRPS 322 Query: 271 WY 272 W+ Sbjct: 323 WW 324 >gi|189237667|ref|XP_001812410.1| PREDICTED: similar to GA20785-PA [Tribolium castaneum] Length = 968 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 38/302 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEED 63 L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E+ Sbjct: 659 PLNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSEN 718 Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS------- 114 T+++E D D L L Y++R + I + + ++ ++ NS+ Sbjct: 719 NTYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPP 778 Query: 115 -------------FIDERF--------SIADVLLHRTWGHNEKI--ASDIKTYHELRINH 151 + D R + +DV + G N + S K Y LR + Sbjct: 779 LETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSL 838 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + + Sbjct: 839 GVGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK 898 Query: 212 -DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 I+ +++ +G L + G LA RI K + + GV V S P Sbjct: 899 IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLG---DGVAVT-SRPS 954 Query: 271 WY 272 W+ Sbjct: 955 WW 956 >gi|156540479|ref|XP_001600004.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 365 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 54/321 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKI 60 S V L ++ +++ G FLQ +IT D+ L A S L +G++L +I K Sbjct: 33 SLVQLDQRTLLRLSGDQVSDFLQGLITNDMRHLKEGAASIYSVFLNIKGRVLYDAIIYKT 92 Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------INGVVLSWNQ---- 106 +++ F +E D S +SL L YKLR V I + +V +Q Sbjct: 93 QDEKVFYVECDSSIVNSLSKHLKMYKLRRKVEIHTEDNSMKVWTAYDPDIVSHVDQKEVE 152 Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRT------------------WGHNE 135 ++S +D F +D L++ N Sbjct: 153 KKSNFEGKIFPCGASDSTSSKLVDNIFIYSDPRLYQLGLRILTQSTVTCDEIIKQLEPNV 212 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + +Y E R G+ + D P T FP + D L+G+S KGCYIGQE+ +R Sbjct: 213 TTQQNASSYREFRYKLGVGEGVQDLPPGTSFPLEINCDYLHGVSFHKGCYIGQELTARTH 272 Query: 196 HRNIIRKRPMIITGTDDLPPS---GSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAI 251 H ++RKR M ++ I + +G + G L + RI A+ Sbjct: 273 HTGVVRKRLMPLSFDKVYEKPLMYDDQITNEAGKIVGKIRGQKGIFGLGLIRI---ADAL 329 Query: 252 KKGMALTVHGVRVKASFPHWY 272 + LTV +K PHW+ Sbjct: 330 ASKI-LTVGDCTLKVVKPHWW 349 >gi|159044636|ref|YP_001533430.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12] gi|157912396|gb|ABV93829.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12] Length = 261 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 11/248 (4%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++ I+V G+ A FLQ ++T D+ +A+L+PQGK L F + ++D +L+ Sbjct: 19 RAVIRVTGRDARDFLQGMVTNDLAKGLEHGLVYAALLSPQGKYLADFFVL-AQDDALLLD 77 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + L+ +L +KLR++V +E + + D R L+ Sbjct: 78 APEALAPDLLKRLTMFKLRADVTLEKTEMPVA----RGLGPAPEGALADPRDPALGWRLY 133 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 G E + + LR+ H + + T+ +P+ + + + L+G+ KGCY+GQ Sbjct: 134 GVAGGPE-----VTDWDALRVAHLVPEAGTELIPNDSYILEMGFERLHGVDFKKGCYVGQ 188 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EVV+R++H+ +RK + + P G I +G LG G +ALA R D+ Sbjct: 189 EVVARMKHKTELRKGLARVAVAGEAAP-GDEITAGGKPVGVLGTRSGDRALAYLRFDRAT 247 Query: 249 HAIKKGMA 256 ++ G A Sbjct: 248 GPMEAGAA 255 >gi|126739975|ref|ZP_01755665.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] gi|126718794|gb|EBA15506.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] Length = 246 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 13/245 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ G FLQ +IT DV L + + +A+LTPQGK + F ++ E +L+ Sbjct: 4 RKILRLSGPDTRSFLQGLITNDVNKLDHGL-VYAALLTPQGKYIADFFLAPAGE-AVLLD 61 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D S + L +L Y+LR+ V IE + + D R S L+ Sbjct: 62 VDESLAEGLAKRLSMYRLRAAVEIETTDLQ----VKRGTGEAPEGALSDPRHSAMGWRLY 117 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 G D ++ +R+ H I + + + P + +A + LNG+ KGCY+GQ Sbjct: 118 GDEG-----GDDGSNWNAIRVAHCIPETSIELGPDSYI-LEAGFERLNGVDFRKGCYVGQ 171 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + + T + P SGS I D +GTL +A+A R D+ Sbjct: 172 EVTARMKHKTELRKGLVTVKVTGEAP-SGSEIKRQDKAVGTLFTSADGQAIAYLRYDRAG 230 Query: 249 HAIKK 253 ++ Sbjct: 231 EDMEA 235 >gi|312216597|emb|CBX96547.1| hypothetical protein [Leptosphaeria maculans] Length = 401 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 77/310 (24%), Positives = 122/310 (39%), Gaps = 41/310 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---- 58 S L+++S I + G A FLQ +IT +V + +A L +G++L I Sbjct: 78 SAPLAHRSLISLSGPDAAKFLQGLITNNVDA-SRQAPFYAAFLDARGRVLWDVFIWVWPE 136 Query: 59 ---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----- 110 + +E+D+++ +L L +KLRS V IE G+ +W Sbjct: 137 LVAEKGHWACYIEVDQTEAGALKKHLKRHKLRSKVTIEDAESVGIWAAWGDAPAQVPKEN 196 Query: 111 SNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 + S D R L RT + D+ YH R G+ + + + P Sbjct: 197 AVSDLQDPRAPGLHRYLVAHDRTSLADRSEVLDVSEYHLQRYLLGVPEGPVEIPRESALP 256 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-----LPPSGSPI-- 220 + +DL +GI KGCY+GQE+ R +H ++RKR + I P SG+ I Sbjct: 257 MECNIDLSSGIDFKKGCYVGQELTIRTKHTGVVRKRMLPIQLEHPGASVSPPVSGTDIKQ 316 Query: 221 ------LTDDIEIGTLGVVVGKKALAIARID--------KVDHAIKKGMALTVHG----V 262 G VG+ LA+ R++ + K GM V V Sbjct: 317 LDDDGRTKRGRAAGKFIAGVGQVGLALCRLEMMTSMKVSAEGGSWKPGMQFGVDTDNGVV 376 Query: 263 RVKASFPHWY 272 +VK W+ Sbjct: 377 KVKPVLHDWF 386 >gi|254439032|ref|ZP_05052526.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] gi|198254478|gb|EDY78792.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] Length = 247 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 15/252 (5%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N++ I++ G + FLQ +IT DV +A+LTPQGK + F ++ ++ ++ Sbjct: 3 NRTLIRLSGPDTVEFLQGLITNDVAK-TSGGLVYAALLTPQGKYIADFFVT-AQDGALLI 60 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 ++ S L +L Y+LRS+V I P+ L T NS+ D R + L Sbjct: 61 DVATSHAAMLAQRLTMYRLRSDVQIAEAPL----LVSRGTGTAPNSALPDPRHA---ALG 113 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 R ++ SD + LR+ H I + + P T +A + LNG+ KGCY+G Sbjct: 114 WRLIAATDQ--SDDTDWDALRVAHVIPETGIELTPETYI-LEAGFERLNGVDFRKGCYVG 170 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVVGKKALAIARI 244 QE+ +R++H+ ++K ++ + P P G+ I T+ GTL G ALA R Sbjct: 171 QEIAARMKHKTELKKGLAQVSISGVAPAKFPMGTEITTNGRPAGTLYTQSGGLALAHLRF 230 Query: 245 DKVDHAIKKGMA 256 D+ ++ G A Sbjct: 231 DRATGDMQAGGA 242 >gi|114763433|ref|ZP_01442840.1| aminomethyl transferase family protein [Pelagibaca bermudensis HTCC2601] gi|114543971|gb|EAU46982.1| aminomethyl transferase family protein [Roseovarius sp. HTCC2601] Length = 244 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 20/259 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + ++V G A FLQ ++T DV L + +A+LTPQGK F + ED + Sbjct: 3 SERKVLRVSGPEAEQFLQGLVTNDVAGLKDGL-VYAAMLTPQGKYRADFFLVPKGED-IL 60 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 +++D + L L YKLRS V I + +FID R Sbjct: 61 IDVDAALAPDLQRMLTMYKLRSKVEIVETD----IAVTRGTGPEPEGAFIDPRDPRMGWR 116 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + + + + LR+ + + + P T F +A + LNG+ KGCY+ Sbjct: 117 GY------DGQTGEEADWDALRVAACVPESGVELTPDT-FILEAGFERLNGVDFRKGCYV 169 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 GQEV +R++H+ +RK + + P GS IL + GTL +A R D+ Sbjct: 170 GQEVTARMKHKTELRKGLAQVDVSGSAP-VGSDILAGEKTAGTLYTQAEGHGIAYLRFDR 228 Query: 247 VDHAIKKGMALTVHGVRVK 265 + T G V+ Sbjct: 229 AKGDM------TADGATVR 241 >gi|86136583|ref|ZP_01055162.1| aminomethyl transferase family protein [Roseobacter sp. MED193] gi|85827457|gb|EAQ47653.1| aminomethyl transferase family protein [Roseobacter sp. MED193] Length = 266 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 13/248 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ G A FLQ +IT+DV + + +A+LTPQGK L F ++ ED +L+ Sbjct: 26 RKILRLSGADARDFLQGLITSDVNKIDQGL-VYAALLTPQGKYLADFFLAADGED-ILLD 83 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + ++L+ +L Y+LR+ V I + + D R + L Sbjct: 84 ADADQAEALMKRLTMYRLRAKVEITETDLK----VKRGTGAAPAGALADPRHAE---LGW 136 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R G ++ +D + L + H I + P + ++ + LNG+ KGCY+GQ Sbjct: 137 RLIGS--EVGADESDWDALHVAHCIPRSGIELGPDSYI-LESGFEALNGVDFRKGCYVGQ 193 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK ++ T P GS I +GT+ +A+A R D+ Sbjct: 194 EVTARMKHKTELRKGLRVVEITGSAP-VGSEITAGGKAVGTVFTQSNGQAIAYLRFDRAK 252 Query: 249 HAIKKGMA 256 + G A Sbjct: 253 GEMTAGDA 260 >gi|329663396|ref|NP_001192509.1| IBA57, iron-sulfur cluster assembly homolog [Bos taurus] gi|297476223|ref|XP_002688553.1| PREDICTED: hypothetical protein [Bos taurus] gi|296486216|gb|DAA28329.1| hypothetical protein BOS_7084 [Bos taurus] Length = 358 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 122/306 (39%), Gaps = 36/306 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G + PFL ++T ++ A + L QG+ L Sbjct: 49 ACFLLGERALVRVRGPDSAPFLLGLLTNELPLPGPAVGEASTSARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + E TF+LE D S D+L LL +K+R V +E P V Sbjct: 109 DVILYGLPERSSEQPTFLLECDSSVVDALQRHLLLHKIRRKVTVEPCPELRVWAVLPCAQ 168 Query: 109 TFSNSS----------FIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINH 151 + + + R + R +E A D++ YH R Sbjct: 169 REAGGAGPLRKKTVCAPVLTRDPRTYRMGWRLLSQDEGSALVPGGRLGDLQDYHRHRYQQ 228 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + + Sbjct: 229 GVPEGVHDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLFPVQFSG 288 Query: 212 DLP-----PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +P P S + G +G LA+ R +K+ + + V + A Sbjct: 289 AVPGGGIAPGASVLTESGQAAGKYRAGLGDVGLALLRSEKIKGPLHIRTS-ESGLVALTA 347 Query: 267 SFPHWY 272 S P W+ Sbjct: 348 SVPDWW 353 >gi|195390113|ref|XP_002053713.1| GJ23197 [Drosophila virilis] gi|194151799|gb|EDW67233.1| GJ23197 [Drosophila virilis] Length = 344 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 31/299 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLIS 58 + L + I+V G +PFLQ ++T DV L + + L G+++ +I Sbjct: 35 TLEPLRQRELIRVHGAEVVPFLQGLVTNDVSRLQEANGPSSMYALFLNRGGRLMYDTIIY 94 Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQ--------EH 108 + + DTF+LE DR L Y++R + I+ V + +N+ Sbjct: 95 RTNDPDTFLLECDRDASSDFRRHLRMYRVRKRIDIDTVDDEYVPWVIFNENGRGDIRTHK 154 Query: 109 TFSNSSFIDERFSIADVLL------------HRTWGHNEKIA---SDIKTYHELRINHGI 153 D R + W +++ +A + Y LR GI Sbjct: 155 AMDLFIAPDPRVGSMGTRVLAPADLNSTKLSKDLWRNHDVVAINPTPDSNYKLLRYKQGI 214 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T + Sbjct: 215 GEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFTAPV 274 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + + +G + +A+ RI+ V + L + G R PHW+ Sbjct: 275 SSNQTVKSVAGANLGRVFGHAHNHGVALLRIEPV---LHGDQQLVLDGERCFVDRPHWW 330 >gi|109017947|ref|XP_001083460.1| PREDICTED: putative transferase C1orf69, mitochondrial [Macaca mulatta] Length = 357 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--------ARGSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ A + L QG+ L Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPLARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ ++E F+LE D S + +L L Y++R V +E P V Sbjct: 109 DVILYGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168 Query: 109 TF---------SNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 + ++ I R + R +E A D+ YH+ R G Sbjct: 169 EAYGNAPLQESAGAAAILIRDPRTARMGWRLLTQDEGPALVSGGRLGDLWDYHQHRYLQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDP 288 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 LP SG + + +G G LA+ +K+ + + V + AS Sbjct: 289 LPASGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347 Query: 268 FPHWY 272 P W+ Sbjct: 348 VPDWW 352 >gi|195112764|ref|XP_002000942.1| GI10516 [Drosophila mojavensis] gi|193917536|gb|EDW16403.1| GI10516 [Drosophila mojavensis] Length = 344 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 119/301 (39%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58 + L + I+V G +PFLQ ++T DV L + + L G++L +I Sbjct: 35 TLEPLHQRELIRVHGAEVVPFLQGLVTNDVSRLQEPSGPSSMYALFLNRGGRLLYDTIIY 94 Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------NQ 106 + + DTF+LE DR L Y++R I+I I+ + W Sbjct: 95 RTNDPDTFLLECDRDASSDFRRHLRTYRVRKR--IDIDTIDDEYVPWVLFNGKGRGNIRT 152 Query: 107 EHTFSNSSFIDERFSIADVLL------------HRTWGHNEKIA---SDIKTYHELRINH 151 D R I + W H++ +A + Y LR Sbjct: 153 HKAMDLFIAPDPRIGIMGTRVLAPGDINATKLTKDLWCHHDVVAVNSTPENNYKLLRYKQ 212 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T Sbjct: 213 GIGEGVEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFTA 272 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + + +G + +A+ R++ V + L + G R P W Sbjct: 273 PVSNHFTVKSVAGANLGRVFGHAHNHGVALLRVEPV---LNSEQQLMLDGERCYVDRPSW 329 Query: 272 Y 272 + Sbjct: 330 W 330 >gi|254293508|ref|YP_003059531.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814] gi|254042039|gb|ACT58834.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814] Length = 274 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 11/269 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+ + V G A FL ++T VL + +R +A+L PQGKI+ L+ K E Sbjct: 5 VCLENRVVLCVDGVDAETFLNGLLTNSVLNMEMGQSRYAALLMPQGKIICDLLLLKT-ET 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F+L++ ++L+ +L ++L++ V I ++ GV F + D R Sbjct: 64 GFLLDVPAQADEALMKRLKMFRLKAQVDISLKDDLGVYA-------FIDDGHPDPRHP-- 114 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 D+ + + + K Y+ RI + + DF + +FP D MDLLNGI KG Sbjct: 115 DMPKRQIGPKDLWENTSRKDYNITRIKLNVPELGKDFGDNEVFPADINMDLLNGIDFKKG 174 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 C++GQEVVSR++ R R+R + + P + +P+ + +G + ALA R Sbjct: 175 CFVGQEVVSRMKRRGTARRRTLAFHFPNGAPDATTPLYLGETLLGEISSSTSDYALARIR 234 Query: 244 IDKVDHAIKKGM-ALTVHGVRVKASFPHW 271 ID++ A +G + + P W Sbjct: 235 IDRLAKAQAEGQTEFIAADKKAELISPDW 263 >gi|163747204|ref|ZP_02154559.1| aminomethyl transferase family protein, putative [Oceanibulbus indolifex HEL-45] gi|161379479|gb|EDQ03893.1| aminomethyl transferase family protein, putative [Oceanibulbus indolifex HEL-45] Length = 248 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ I+T D+ L +A+LTPQGK + F + D Sbjct: 1 MTTRRILRLTGPDTRDFLQGIVTNDIAKLDQGP-VYAALLTPQGKYMADFFLIAAG-DGV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++D S D L +L YKLR+ V IE + + D R Sbjct: 59 LLDVDESLGDMLTQRLSMYKLRAKVTIEPTEL----HLHRGTGPAPEDAVADPRHPEMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +R + ++ LR+ H I + + P T F +A +D +NG+ KGCY Sbjct: 115 RAYRDTPQTDDTT----DWNALRVAHLIPETGVELTPDT-FILEAGLDRINGLDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + P G+ I + GTL +ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLTRVDVKGSAAP-GTAITAEGKPAGTLYTQADGQALAHLRFD 228 Query: 246 KVDHAIKKGMA 256 + ++ A Sbjct: 229 RAKGPMQADEA 239 >gi|332374088|gb|AEE62185.1| unknown [Dendroctonus ponderosae] Length = 343 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 42/306 (13%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE-E 62 +L +S ++V G A FLQ +IT D+ L + + + L +G+IL LI K E + Sbjct: 27 HLKERSLVQVKGPDASNFLQGLITNDINHLSDRVGSMFAMFLNIRGRILFDTLIYKTEVK 86 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV------------------VLSW 104 D + +E DR +L L YK++ V I V V+ Sbjct: 87 DEYWVECDRIASTTLQKHLKMYKVKRQVDITGLDDYEVHVLYSSKFLDTSVTDFKSVIEN 146 Query: 105 NQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKI------ASDIKTYHEL 147 + F SS F D R + + + D +Y +L Sbjct: 147 AGKSDFPESSAGFRSFNSLLIFKDPRVPHMGFRILSKRIDVQSVLNSLVECDDSNSYRKL 206 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + + GI + D L + FP + D L+G+S KGCYIGQE+ +R H +IRKR M + Sbjct: 207 KFSLGIGEGIEDLLSGSSFPLECNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPL 266 Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + I+ + +G L + G LA+ R V A++ G ++TV Sbjct: 267 HFSKVPTALPEGNIVINKSNLGKLRGIEGNVGLALLR---VAEALELG-SITVGNGEASI 322 Query: 267 SFPHWY 272 P W+ Sbjct: 323 VKPFWW 328 >gi|156386911|ref|XP_001634154.1| predicted protein [Nematostella vectensis] gi|156221234|gb|EDO42091.1| predicted protein [Nematostella vectensis] Length = 330 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 22/289 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLISKI-- 60 L + ++V G ++ FLQ ++T ++ + + L QG++L ++SK Sbjct: 36 LDKRCILRVSGPDSVKFLQGLVTNNIELFHGDSTIRSMYTMFLNAQGRVLYDAILSKDKT 95 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------INGVVLSWNQEHTFS 111 E +F +E DRS +L L F+KLRS I + ++ E + Sbjct: 96 HSETPSFFIECDRSISAALTKHLKFFKLRSKADISHAEGLVPWTVFSEEIVDLKPEEDWK 155 Query: 112 NSSFI-DERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIVDPNTDFLPST 164 + S + D R L + + Y E R G+ + + + Sbjct: 156 DFSIVPDPRVKKLGHRLILPSDTDPSACIEGAGHAPRGAYEEHRARLGVCEGEEEIPIAN 215 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD- 223 P + +D LNG+S KGCYIGQE+ +R H +IRKR M T + SG+ I T+ Sbjct: 216 AMPLEYNLDFLNGVSFHKGCYIGQELTARTHHTGVIRKRIMPFTIASNNISSGAAIKTEA 275 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G + +V G+ L + R+ + A ++ P W+ Sbjct: 276 GKASGKVCIVHGQYGLGMIRLANLKAGKLLVEAKDGQHTEMRPYVPDWW 324 >gi|47220333|emb|CAF98432.1| unnamed protein product [Tetraodon nigroviridis] Length = 320 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 30/300 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISK 59 + +L +++ +++ G FLQ +IT DV L P K A + +L QG+ L ++ + Sbjct: 20 ACYHLPHRTVVRLQGPDTGLFLQGLITNDVGLLEEPGKGAMYAHMLNVQGRTLFDIMLYR 79 Query: 60 IEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS- 114 ++E +E D + +L+ YKLR + I P V ++ ++ Sbjct: 80 LKESDAGLGVFVECDSTVEAALLRHFKMYKLRKKLHINPCPELSVWAVLPKQRPTEQAAS 139 Query: 115 -------------FIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVD 155 D R + L + D + YH R G+ + Sbjct: 140 KPELSSPDKGLVLVTDPRTAEMGWRLVLDNQVDPLDIITSCHKGDTEEYHRHRYAIGLPE 199 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---D 212 D P P ++ + + GIS +KGCYIGQE+ +R H ++RKR M + + D Sbjct: 200 GVKDLPPGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKRLMPVCLSAPVQD 259 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 L + G VGK L++ R + V V+AS P W+ Sbjct: 260 LEEGAALQTQSGKPAGKHRAGVGKLGLSLVRTANAKEVLTLKSK-NDAVVTVQASVPDWW 318 >gi|281340181|gb|EFB15765.1| hypothetical protein PANDA_019539 [Ailuropoda melanoleuca] Length = 317 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53 + L ++ ++V G ++PFL ++T ++ +A + L QG+ L Sbjct: 9 ACFPLGERALVRVRGPDSVPFLLGLLTNELPLPASAAGAVSSPALAGYAHFLNVQGRTLY 68 Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------- 102 L+ ++ E F+LE DR+ +L L YK+R V +E +P V Sbjct: 69 DVLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPE 128 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 + + I R + R +E +A D++ YH R HG Sbjct: 129 EGGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHG 188 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 189 VPEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGP 248 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 LP G S + G G LA+ R +K+ + + + + AS Sbjct: 249 LPAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTS-ESGQLALTAS 307 Query: 268 FPHWY 272 P W+ Sbjct: 308 VPDWW 312 >gi|114769319|ref|ZP_01446945.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] gi|114550236|gb|EAU53117.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] Length = 253 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 11/256 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + N+S +KV G + FLQ +IT DV +A+L+P+GK L F I+ Sbjct: 1 MCPEIIKNRSILKVSGNDSENFLQGLITNDVSRAKT-ELIYTALLSPKGKYLFDFFIT-S 58 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D ++++I + I +L YKLR++V IE + S +F D R Sbjct: 59 HSDGYLIDISSNNAYQFIQRLNLYKLRADVTIEQTD----IKVGRGIGPISEQAFQDPR- 113 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +D L +R + + S I + ++R+ + I + + + + +A + L+G+ Sbjct: 114 --SDQLGYRIYNPTQTEDSSIN-WDQIRVENCIPETGIELIIDETYILEANFEKLSGVDF 170 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV +R++H+ ++K + + P G+ I+++D +G + A+A Sbjct: 171 RKGCYVGQEVTARMKHKVELKKGFVKVQIDGSAP-IGTDIISNDKVVGQIFTQSNGMAIA 229 Query: 241 IARIDKVDHAIKKGMA 256 R ++V + +K G A Sbjct: 230 YLRFNRVSNDMKAGTA 245 >gi|320461691|ref|NP_001070103.2| putative transferase C1orf69 homolog, mitochondrial [Danio rerio] gi|263405678|sp|B8JMH0|CAF17_DANRE RecName: Full=Putative transferase CAF17 homolog, mitochondrial; AltName: Full=Iron-sulfur cluster assembly factor homolog; Flags: Precursor gi|220673097|emb|CAX13033.1| novel protein (zgc:153540) [Danio rerio] Length = 354 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 29/299 (9%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISK 59 S L +++ + V G+ FLQ IIT D+ L A + +L QG+ L ++ Sbjct: 50 SCYRLPHRTVLNVSGQDTSSFLQGIITNDMNLLGEDSLNAMYAHVLNVQGRTLYDIILYS 109 Query: 60 IEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV---------LSWN 105 ++ + +LE D + +DS++ L YK+R V + + P + + Sbjct: 110 LKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSLSLWALLPHSKEAVLGR 169 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDP 156 + T ++ + E+ +++ R + DI + YH R G+ + Sbjct: 170 PDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGNTEEYHRHRYEIGLPEG 229 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--P 214 D P P +A + + GIS +KGCYIGQE+ +R H +IRKR M ++ + Sbjct: 230 VGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKRLMPVSLSAPAEKL 289 Query: 215 PSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 GS + G V K L++ R+ ++ + V V AS P W+ Sbjct: 290 NQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQLKSS-GDETVTVLASVPDWW 347 >gi|301787921|ref|XP_002929380.1| PREDICTED: putative transferase C1orf69, mitochondrial-like, partial [Ailuropoda melanoleuca] Length = 319 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53 + L ++ ++V G ++PFL ++T ++ +A + L QG+ L Sbjct: 11 ACFPLGERALVRVRGPDSVPFLLGLLTNELPLPASAAGAVSSPALAGYAHFLNVQGRTLY 70 Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------- 102 L+ ++ E F+LE DR+ +L L YK+R V +E +P V Sbjct: 71 DVLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPE 130 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 + + I R + R +E +A D++ YH R HG Sbjct: 131 EGGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHG 190 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + Sbjct: 191 VPEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGP 250 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 LP G S + G G LA+ R +K+ + + + + AS Sbjct: 251 LPAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTS-ESGQLALTAS 309 Query: 268 FPHWY 272 P W+ Sbjct: 310 VPDWW 314 >gi|149915805|ref|ZP_01904330.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] gi|149810387|gb|EDM70232.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] Length = 244 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 13/248 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++ +++ G A FLQ ++T ++ L + + +A+LTPQGK + F ++ +T +L+ Sbjct: 3 RTILEITGSEAQDFLQGLVTNEMRKLDHGL-VYAAMLTPQGKYIADFFLA-GHGETILLD 60 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D S L+ +L YKLR++V I + + + D R L+ Sbjct: 61 VDESLSAQLMQRLSMYKLRADVTITQSELQ----VKRGTGPAPDGALADPRHPDLGWRLY 116 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 G D + +R+ H I + + + F +A + LNG+ KGCY+GQ Sbjct: 117 GAEG-----GDDGTDWEAIRVAHCIPETGIEL-SADTFILEAGFERLNGVDFKKGCYVGQ 170 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + P G+ I + + GTL G K +A R D+ Sbjct: 171 EVTARMKHKTELRKGLATVEVHGTAP-VGTQITSSEKPAGTLFTQSGGKGIAYLRFDRAS 229 Query: 249 HAIKKGMA 256 ++ A Sbjct: 230 GQMQAESA 237 >gi|319408291|emb|CBI81944.1| aminomethyltransferase [Bartonella schoenbuchensis R1] Length = 288 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 94/272 (34%), Positives = 147/272 (54%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+ Sbjct: 6 NTISLKNRKIIKVIGEKATRFLQALITTDVEKINSQELFPGALLSPQGKVIADFLIGKID 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFIDER 119 + ++++I D+ +L+ YKL + V I V + W E + SFID+R Sbjct: 66 Q-GYMIDIAAPLADTFQQRLILYKLHTKVEITQPLQLVVTVFWKTEISTCDFDLSFIDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G +A + ++ +RI + I + D+ +FPHD D ++G+ Sbjct: 125 FPKKEKMV-RVYGKIPFLAPEHNDNWNRMRIRYAIAESGQDYEIGKVFPHDINYDQISGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCYIGQEVVSR+ HR R+R +I+ G L P GS I +G LG V +A Sbjct: 184 SFNKGCYIGQEVVSRMHHRRAARRRFLIVKGQHKLMP-GSTIQAGTKILGELGTCVENEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V + K + T+ + V + Sbjct: 243 LALMRIDHVKDVMDKHIPFTIENLPVTINIAE 274 >gi|157110240|ref|XP_001651016.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti] gi|157110242|ref|XP_001651017.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti] gi|108878785|gb|EAT43010.1| conserved hypothetical protein [Aedes aegypti] gi|108878786|gb|EAT43011.1| conserved hypothetical protein [Aedes aegypti] Length = 341 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 42/304 (13%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEE- 62 L ++S + V G A+PFLQ +IT D+ L + + L G++L LI +++E Sbjct: 36 SLESRSILGVRGSDAVPFLQGLITNDMNHLLRGSTSMYAMFLNTSGRVLYDSLIYRVDEK 95 Query: 63 --DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 F++E D S + L L +++R V I + V Q T S Sbjct: 96 VGQHFLVECDTSVVEQLAKHLNLFRVRKKVEITKTDMKIWVAFTAQNSTHDQSPKIALKK 155 Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASDIKT-------------YHELRINHGI 153 F D R L +R ++ + +D+KT + + R + GI Sbjct: 156 ADINGTLIFKDARLPE---LGYRLLTNSSTVLNDLKTHFSDEIDSPQNGSFVQHRYSLGI 212 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 + + P FP + D L+G+S KGCYIGQE+ +R H +IRKR M + Sbjct: 213 GEGVINLPPGKCFPLENNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPLIFDQPV 272 Query: 213 ---LPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 L P + I + +G L L + RI+KV I + + + K Sbjct: 273 DCGLLPEDAEIKTMEGQTVGKLRGYHKTFGLGLLRIEKV---ISSQLMIAGNTYHCKTFK 329 Query: 269 PHWY 272 P W+ Sbjct: 330 PDWW 333 >gi|99081825|ref|YP_613979.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] gi|99038105|gb|ABF64717.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] Length = 248 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 14/261 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +++ G FLQ +++ DV + + +AILTPQGK L F ++ + D Sbjct: 1 MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGL-VYAAILTPQGKYLADFFLA-ADGDAV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + D L+ +L YKLR+NV +E + + D R Sbjct: 59 LLDVAEALADDLVKRLKMYKLRANVTLEETDLKLR----RGTGDAPEGALPDPRHP---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G + D + +R+ H I + + P + + + LNG+ KGCY Sbjct: 112 LGWRQYGK--ETFDDGSDWDVIRVTHVIPETGIELTPDSYL-LEVGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + +P G+ I +G + G KA+A R D Sbjct: 169 VGQEVTARMKHKTELRKGLTQVEIDGTVP-VGAQITAGGKAVGQVFTQSGGKAIAYLRFD 227 Query: 246 KVDHAIKK-GMALTVHGVRVK 265 + A++ G AL + Sbjct: 228 RAKGALEAEGTALRWPEAPAE 248 >gi|225708392|gb|ACO10042.1| Hypothetical protein C21E11.07 in chromosome I [Osmerus mordax] Length = 364 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 29/298 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKI 60 L +++ + + G+ +LQ I+T D+ L P A + +L QG+ L ++ ++ Sbjct: 61 CYNLKHRTLLNIQGQDTRAYLQGIVTNDMELLKEPDHRAMYAHMLNVQGRTLFDIIMYRL 120 Query: 61 EEDT----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------- 108 ++ +LE D + +DS++ L YKLR V I+ P V ++ Sbjct: 121 KDAEVGCSLLLECDSTVKDSILKHLKLYKLRRKVNIKPCPELTVWAVLPRDKVAGCQEIP 180 Query: 109 --TFSNSSFI---DERFSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPN 157 T + I D R + L N D + YH+ R G+ + Sbjct: 181 NITPPEQALICEADPRNAEMGWRLVADSKVNPLDLILSCQLGDSEEYHKHRYAIGLPEGV 240 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PP 215 D P ++ + + GIS +KGCYIGQE+ +R H ++RK M + + Sbjct: 241 KDLPLGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKPLMPVRLSAPAEGLE 300 Query: 216 SGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G+ + G +G+ L++ R+ + + V ++ S P W+ Sbjct: 301 EGAQLQTQSGKPAGKHRAGIGQLGLSLIRLAHAKEPLTFKL-FEDTAVTLEGSVPDWW 357 >gi|312380505|gb|EFR26480.1| hypothetical protein AND_07439 [Anopheles darlingi] Length = 374 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 119/316 (37%), Gaps = 49/316 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S LS+++ ++V G+ ++ FLQ ++T D+ + A + L G++ L+ + Sbjct: 55 SFEPLSDRALVRVHGEDSVSFLQGLMTNDMRHFEHSRAIYTMFLRVNGRVFCDALVYRHP 114 Query: 62 E----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--- 114 E D F+LE DR L L Y+LR V + + +++ + + Sbjct: 115 EAKGNDDFLLECDRPAASRLEKHLKLYRLRKKVQVLLDETYHTWVAYRAQADPEAKALPV 174 Query: 115 -----------FIDERFSIADVL------------LHRTWGHNEKIASDIKTYHELRINH 151 F D R L R + + Y R Sbjct: 175 DERKAHTDPHLFKDPRLPRLGYRVLMGSNGDQTEKLDRLLETFPGEIATVPRYVPFRYTL 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + + FP ++ D L+G+S KGCYIGQE+ +R H + RKR M + Sbjct: 235 GVGEGELNLPDGKAFPLESNCDWLHGVSFHKGCYIGQELTARTYHTGVTRKRLMPLQFEG 294 Query: 212 DLPPSGSPI---------LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--- 259 LP PI +G L + L + RI+KV + G LT+ Sbjct: 295 -LPLEDVPIDVLREADIKNQVGASVGKLRGYSAGQGLGLLRIEKV---LPAGGPLTLSVP 350 Query: 260 ---HGVRVKASFPHWY 272 H + P W+ Sbjct: 351 GITHSIVCHTIRPFWW 366 >gi|288958954|ref|YP_003449295.1| protein [Azospirillum sp. B510] gi|288911262|dbj|BAI72751.1| protein [Azospirillum sp. B510] Length = 308 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 31/302 (10%) Query: 1 MSS--VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 MS+ L +S + V G+ FLQ +++ DVL + A + LTPQGK L F++ Sbjct: 1 MSAGYTVLDRRSVVAVTGEDRKAFLQGLVSNDVLRVTPDHAAYALFLTPQGKFLHDFMMV 60 Query: 59 KIEEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSWNQ 106 + E+D +L+ + +R L+ +L YKLRS + +E + G + + Sbjct: 61 ESEDDAGPALLLDPETDRRADLLRRLKMYKLRSKIALEDRAERLRVVIAFGEGALAALGL 120 Query: 107 EHTFSNS-------SFIDERFSIADVLLH----------RTWGHNEKIASDIKTYHELRI 149 + +F D R L D Y LR+ Sbjct: 121 PAEPGAARPFAGGVAFTDPRLPGLGARLFLPVNGPVNGLAALEAAGLGGRDAAEYDRLRL 180 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + G+ D D +P P ++ MD LN IS KGCY+GQE+ +R ++R +I+K+ +T Sbjct: 181 SLGVPDGTLDLIPEKSIPLESRMDALNAISWDKGCYMGQELTARTKYRALIKKKLFPVTF 240 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +P +G+P+ D E+G + ALA+ R++ V A G L + P Sbjct: 241 DGPIPEAGTPVTLDGKEVGEIRSGRDAAALALLRLEDVQLAAANGSVLQAGSATLTPCDP 300 Query: 270 HW 271 W Sbjct: 301 EW 302 >gi|126335964|ref|XP_001376859.1| PREDICTED: similar to chromosome 1 open reading frame 69 [Monodelphis domestica] Length = 357 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 42/307 (13%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL----------PYKIARGSAILTPQGKILLY 54 L ++ ++V G FL ++T ++ A + L QG+ L Sbjct: 49 PLRDRDALRVHGPDTESFLLGLVTNELPRPVPEGGATSEPAPAPAHYAHFLNVQGRTLYD 108 Query: 55 FLISKI----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 ++ ++ EE F+LE+D S ++ + L YK+R V I P + Q Sbjct: 109 VILYRLHEHQEEPHFLLEVDSSVSGAVQNHLKLYKIRRKVSISPCPDLSLWAVLPQTAAE 168 Query: 111 SNSSFIDER---------FSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152 +++ + E+ A + R H E +A ++ + YH+ R G Sbjct: 169 ASAKPLLEKGGKPLVLTPDPRAACMGWRLIIHKEDLAQEVIPKTQIRHSQDYHKHRYQKG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + D P P ++ + +NG+S TKGCYIGQE+ +R QH +IRKR I + Sbjct: 229 IPEGVRDLPPGVALPLESNLTFMNGVSFTKGCYIGQELTARTQHMGVIRKRLFPIRFSAP 288 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVK 265 LP G + + G G +A+ R +++ + T G V + Sbjct: 289 LPEEGISAGANVLTEAGKAAGKYRAREGDLGIALLRTERIKGPLHIK---TSGGQCVSII 345 Query: 266 ASFPHWY 272 S P W+ Sbjct: 346 PSVPDWW 352 >gi|332252096|ref|XP_003275189.1| PREDICTED: putative transferase C1orf69, mitochondrial [Nomascus leucogenys] Length = 357 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 35/305 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL ++T ++ Y A + L QG+ L Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPYARAGYAHFLNVQGRTLY 108 Query: 54 YFLISKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ ++E + F+LE DRS + +L L Y++R V +E P V Sbjct: 109 DVILYGLQEHSEEVSVFLLECDRSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168 Query: 109 TFSNSSFIDE---------RFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152 ++ + E R + R +E A D+ YH+ R G Sbjct: 169 EACGAASLQEKAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQG 228 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + D P P ++ + +NG+S TKGCYIG E+ +R H +IRKR + D Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGHELTARTHHMGVIRKRLFPVRVLDP 288 Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 P SG + + +G G LA+ +K+ + + V + AS Sbjct: 289 FPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347 Query: 268 FPHWY 272 P W+ Sbjct: 348 VPDWW 352 >gi|110679047|ref|YP_682054.1| aminomethyl transferase family protein, putative [Roseobacter denitrificans OCh 114] gi|109455163|gb|ABG31368.1| aminomethyl transferase family protein, putative [Roseobacter denitrificans OCh 114] Length = 245 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I + D Sbjct: 1 MTKRRILRLTGTDVSEFLQGLITNDIKGVETGL-VYAAMLTPQGKFLADFFICR-SGDAM 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ S D L+ +L YKLR++V IE + + D R Sbjct: 59 LIDVAESHGDMLMQRLNMYKLRADVTIEATDL----HLHRGLGDPPEGAMADPRHP---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + D + LR+ H I + + P T F + + + G+ KGCY Sbjct: 112 LGWRRYADAPQT-DDSTDWTALRVEHQIPEAGIELTPDT-FILEVGFERIAGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK ++ G+ I + G L G +ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSIAGP-AEPGAEITANGKPAGVLHSRAGDRALAYLRYD 228 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 229 RATGPMQAGAA 239 >gi|315498153|ref|YP_004086957.1| folate-binding protein ygfz [Asticcacaulis excentricus CB 48] gi|315416165|gb|ADU12806.1| folate-binding protein YgfZ [Asticcacaulis excentricus CB 48] Length = 269 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 27/277 (9%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSAILTPQGKILLY 54 + + L +++ I + G FL + D+ + + A LTPQGK+ Sbjct: 3 NLIALPHRALIALSGPDWGKFLNGQTSIDLENIFDAVAAGENRHLYYGAFLTPQGKLSAD 62 Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 I + DT +++D RD L +L +KLR+ V + +P V S+++ Sbjct: 63 VFICPRDSDTVWIDVDAGVRDELFTRLNMFKLRAKVTLS-KPEAKVYASFSE-------G 114 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 D R L+R +G E + TY E R+ G+ +P DF ++P D MDL Sbjct: 115 LPDPRAP----GLYRAYGTFEAMGG-FTTYTEFRLTQGVAEPGLDFPKDYLYPIDINMDL 169 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + I KGC++GQE SR++ R I+ R + ++ GS +L + G + Sbjct: 170 IAAIDFKKGCFVGQETTSRMKRRGTIKNRLIPLSHNGTF-AFGSEVLLGERRAGEILASA 228 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 K+LA+ R+D++D LT G V + P W Sbjct: 229 NGKSLALMRLDRLDGD------LTCAGDAVTLAVPDW 259 >gi|241111420|ref|XP_002399278.1| conserved hypothetical protein [Ixodes scapularis] gi|215492944|gb|EEC02585.1| conserved hypothetical protein [Ixodes scapularis] Length = 356 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 45/311 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-------RGSAILTPQGKILLYF 55 L ++ I++ GK +PFLQ +IT D L + +L G++L F Sbjct: 36 CEQLRSRKLIRLRGKDCLPFLQGMITNDTRHLSVDPQPSVSTSCMYAMMLNAAGRVLYDF 95 Query: 56 LISKIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------ 106 L+ K + +D +LE D R +++ YKLR +V +E V +++ Sbjct: 96 LLYKPDPRHDDEVLLECDADARSTVLKLFNLYKLRKDVRLEPCDELSVWAAFHPFCGTVD 155 Query: 107 -------EHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIKTYHE 146 T + + ++ R +L HR S +Y + Sbjct: 156 EPLPAEIPITVAGDATVNVRDPRLYLLGHRVLLDSTQDLVASNPTFQAAPQDSSESSYTK 215 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR G+ + D + FP + D ++G+S KGCYIGQE+ +R H ++RKR M Sbjct: 216 LRYQLGVSEGLGDLPTANCFPLEYNADYMSGVSFHKGCYIGQELTARTHHTGVVRKRIMP 275 Query: 207 ITGTDDLPPSG---SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 + D + G ++ D D +G V G+ LA+ R+D+ A L+V Sbjct: 276 VVLLDRVDGGGVASDTVVKDGNDKAVGKFRVHRGQVGLALLRVDEALSA----AELSVGS 331 Query: 262 VRVKASFPHWY 272 VR+ P W+ Sbjct: 332 VRLSTVKPGWW 342 >gi|328785953|ref|XP_001120590.2| PREDICTED: putative transferase C1orf69, mitochondrial-like [Apis mellifera] Length = 371 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 52/315 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKIEED- 63 L N+S ++V G + FLQ +IT D+ A + L +G+++ +I + +ED Sbjct: 46 LKNKSLLRVRGNEVLIFLQGLITNDMKHFEEGAANLYALFLNTKGRVMYDVIIYRSQEDN 105 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------- 116 + +E D +SL L Y++R + I+ + V ++ N+ I Sbjct: 106 VYYIECDSQAAESLQKHLKMYRVRRKIDIDYLEDSVNVWAFFDPIQHMNNKHINNRQKLE 165 Query: 117 ------------------------DERFSIADVLL--------HRTWGHNEKIASDIKT- 143 D R S + + H+ H A D Sbjct: 166 GLIFPCGTLNNKVSKIVDNIMIYEDPRLSDLGIRILAASEIERHKIIKHLNSNALDSANH 225 Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H ++R Sbjct: 226 LSYKAFRYKLGVPEGIEDLPPGKPLPLEVNCDYLHGVSFHKGCYIGQELTARTYHTGVVR 285 Query: 202 KRPMIITGTDDLPPS---GSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 KR M + + S I+ + +G + + L + RI+ +A +L Sbjct: 286 KRLMPLLFNEVPNKSFSYDEKIINETGNVVGKFRGIENQYGLGLMRINDSLNA----QSL 341 Query: 258 TVHGVRVKASFPHWY 272 T+ +++K S P W+ Sbjct: 342 TISNIKLKVSKPIWW 356 >gi|119383483|ref|YP_914539.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus denitrificans PD1222] gi|119373250|gb|ABL68843.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus denitrificans PD1222] Length = 238 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 17/249 (6%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + V G+ + FLQ ++T V +A+LTPQGK L FLI + + +++ Sbjct: 2 RRILAVSGEDRVEFLQGLVTNKV----GPEPCWAALLTPQGKYLADFLIVP-DGERLLVD 56 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D L+ +L YKLRS V +E + + +D R D L Sbjct: 57 VDARLEGDLMRRLSMYKLRSKVALEPTDLTVA----RGTGPAPEGAIMDPRH---DALGW 109 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G D + +R+ H I + + +P+ F +A + L+G+ KGCY+GQ Sbjct: 110 RLYG---GEGDDGSDWDAIRVAHCIPETLVELIPNETFILEAGFERLHGVDFRKGCYVGQ 166 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKV 247 EV +R++H+ +RK + + G + P G+PI + D E+GTL G +A+A R D++ Sbjct: 167 EVTARMKHKTELRKGLVTV-GIEGAAPVGTPILMADGREVGTLFTQSGDRAIAYMRFDRM 225 Query: 248 DHAIKKGMA 256 + G A Sbjct: 226 GEGLVAGDA 234 >gi|49475310|ref|YP_033351.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1] gi|49238116|emb|CAF27323.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1] Length = 285 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 102/272 (37%), Positives = 151/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK+L FLI K Sbjct: 6 NAICLKNRKIIKVTGEEATHFLQALITTDVKKIGLQEIFPGALLSPQGKVLADFLIGKR- 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 ED + ++I S D L +LL YK+R+ V I V +SW E N SSFID+R Sbjct: 65 EDGYFIDIFSSLSDLLYKRLLLYKMRTKVEIMQPLQEFVTVSWENETDSLNFYSSFIDKR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G +AS+ ++ LRI + I + + D+ +FPHD D +NG+ Sbjct: 125 FPAKEKII-RIYGETPFLASECHDNWNRLRIRYAIPESDKDYEIGKVFPHDINYDQINGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 + KGCYIGQEVVSR+ HR R+R +++ +L P G+ I+ +G+LG +A Sbjct: 184 AFNKGCYIGQEVVSRMHHRRAARRRILLVKSQHELIP-GANIVAGTKILGSLGTCAANEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID + A+ TV V V S Sbjct: 243 LALMRIDHIKDAMDHNTPFTVKDVPVTISIAE 274 >gi|149203599|ref|ZP_01880568.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] gi|149142716|gb|EDM30758.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] Length = 248 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 14/249 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ GK A+ FLQ ++T D+ L + + +AILTPQGK L FL+S+ +D L+ Sbjct: 3 RRILEITGKDALQFLQGLVTNDLQKLDHGL-VYAAILTPQGKYLADFLLSR-HDDAIRLD 60 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D S L+ +L YKLR++V I+ + + +D R + L Sbjct: 61 VDASLAPMLLQRLTMYKLRADVTIKETDLK----VRRGTGPAPLGALVDPRHAD---LGW 113 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+GQ Sbjct: 114 RLYG--ETGGDDGSDFDRIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVGQ 170 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKALAIARIDKV 247 EV +R++H+ +RK ++ P GS I T + GTL G + +A R+D+ Sbjct: 171 EVTARMKHKTELRKGLTLVAVHGAAP-IGSEIFTPEGKAAGTLYTQSGGRGIAYLRLDRA 229 Query: 248 DHAIKKGMA 256 + G A Sbjct: 230 AAGMTSGEA 238 >gi|195054166|ref|XP_001993997.1| GH18001 [Drosophila grimshawi] gi|193895867|gb|EDV94733.1| GH18001 [Drosophila grimshawi] Length = 354 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 41/307 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58 + L + I+V G PFLQ ++T DV L + S L G+++ +I Sbjct: 37 TLEPLPQRELIRVHGAEVTPFLQGLVTQDVSRLQEPSGPASIYSLFLNRAGRLMFDTIIY 96 Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + + DT+++E DR L Y++R I+I ++ + W Q+ T + Sbjct: 97 RTNDKDTYLVECDRDASSDFRRHLRTYRVRK--HIDIDTVDDEYVPWVLFNDGQQKDTEA 154 Query: 112 NSS-----------FIDERFSIADVLL------------HRTWGHNEKIASD---IKTYH 145 + D R + + W ++E IA + K Y Sbjct: 155 RMASSKQKAKDLFIASDPRIGSLGIRILAPSDMSDAQLATTLWRNHEVIAVNPDIEKNYK 214 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M Sbjct: 215 LLRYKQGIGEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYM 274 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 I T + + +G + +A+ RI+ V + L + G R Sbjct: 275 PIRFTAPIRSDMTVKSVSGASLGRVLGHAQNHGVALLRIEPV---LNSAQQLVLDGDRCF 331 Query: 266 ASFPHWY 272 A PHW+ Sbjct: 332 AERPHWW 338 >gi|332026993|gb|EGI67089.1| Putative transferase C1orf69-like protein, mitochondrial [Acromyrmex echinatior] Length = 370 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 123/322 (38%), Gaps = 55/322 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKI 60 + L ++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K Sbjct: 38 TLERLIDRSILRVNGNEASFFLQGLITNDMKHLDEGAPSIYTLFLNIRGRVMCDAIVYKS 97 Query: 61 EE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI-- 116 EE + + +E D DSL L Y++R + IE + V +N N + + Sbjct: 98 EESNLYYIECDSQIVDSLQRHLKMYRVRRKIDIEHVGDKINVWSMFNSTKYLDNGAAVNE 157 Query: 117 -------------------------------DERFSIADVLL-----------HRTWGHN 134 D R + + + + Sbjct: 158 TEKFKLEGMIFPCGTFNSKTSKFVDNVMIYEDPRLPDLGLRILVESQISRNEIIKHLDAD 217 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + + Y R GI + D P P + D L+G+S KGCYIGQE+ +R Sbjct: 218 IAPSESLGDYKAFRYKLGIGEGMHDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTART 277 Query: 195 QHRNIIRKRPMIITGTD--DLPPSGSP--ILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250 H ++RKR M + + D P + + +G V K L + RI++ A Sbjct: 278 YHTGVVRKRLMPLLFDNVIDKPFAYDEKILNESGNAVGKFRGCVAKYGLGLMRINESLSA 337 Query: 251 IKKGMALTVHGVRVKASFPHWY 272 + L V G+ V+ P W+ Sbjct: 338 RE----LNVSGMNVRVVKPAWW 355 >gi|126733404|ref|ZP_01749151.1| aminomethyl transferase family protein [Roseobacter sp. CCS2] gi|126716270|gb|EBA13134.1| aminomethyl transferase family protein [Roseobacter sp. CCS2] Length = 244 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + ++ + + G + FLQ ++T DV +A+LTPQGK + F + ++D Sbjct: 1 MPERTVLSISGDDRMSFLQGLVTNDVTK-ADGAIIYTALLTPQGKYIADFFVI-GQDDRL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ S +L +L Y+LR+ V IE + + +F D R D Sbjct: 59 LIDVATSHAQTLGQRLTMYRLRAAVTIEQTDL----VVSRGTSPKPEGAFADPRH---DA 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + R +G + S+ + +R+ H I + T +A + LNG+ KGC+ Sbjct: 112 MGWRAYG--DTNISNDTDWDAVRVKHLIPQTGVELTDDTYV-LEAGFEALNGVDFKKGCF 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+V+R++H+ ++K +T P G I D GTL V G ALA R D Sbjct: 169 VGQEIVARMKHKTTLKKGLAQVTIKGHAMP-GDAITADGKPAGTLYTVSGDNALAFLRFD 227 Query: 246 KVDHAIKKGMA 256 + D ++ G A Sbjct: 228 RADGLMQAGDA 238 >gi|146278057|ref|YP_001168216.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17025] gi|145556298|gb|ABP70911.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17025] Length = 255 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 12/260 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59 M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F I + Sbjct: 1 MPGEIATDRRLWELTGKDGLHFLQGLVSNDVRPLERADGIVWAALLSPQGKYLADFFIVR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 +E ++I ++ +L YKLR++V I + V + D R Sbjct: 61 LEG-RLFIDISDRLAEATFRRLGMYKLRADVQIAPLDLPVV----RGLGEPPTGALPDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G I + +R+ H I + + +P + ++ + L+G+ Sbjct: 116 HPDLGWRGYGLTGDAPSI-----DWDAIRVAHVIPESGLELIPDDSYILESGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK + ++ + D P G+ I D +GTL G +A+ Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVSISGDAP-FGAEITADGKPVGTLFTRSGDRAI 229 Query: 240 AIARIDKVDHAIKKGMALTV 259 A R D+ ++ G A+ Sbjct: 230 AFVRHDRAAGEMRAGEAVLA 249 >gi|296537311|ref|ZP_06899188.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957] gi|296262361|gb|EFH09109.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957] Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 11/275 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ ++V G+ + FLQ +++ DV A +A+LTPQGK L F I Sbjct: 80 MPLSPLPDRAVLEVTGEDRLAFLQGLVSNDVTQAAPGRAVWAALLTPQGKWLADFFIV-A 138 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDER 119 D +L+ S+ +L +L ++LRS V I ++ V+ W + + D R Sbjct: 139 GADRLLLDTAASQAGALAQRLSRFRLRSRVAIALREDLAVLAGWGESLPPEGVLAAPDPR 198 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 A R + I Y R++ G+ D D P +A D L GIS Sbjct: 199 LPEAG---WRAILNASAIPPGDGDYARHRLSLGLPDGAPDLEPEKSVLLEAGFDELGGIS 255 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-GKKA 238 +KGCY+GQE+ +R ++R ++++R + + LP G+P+L D +G + Sbjct: 256 WSKGCYMGQELTARTRYRGLLKRRLVPVAVEGPLPAPGTPVLRDGATVGEMRSGHPDGLG 315 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA+ R+ I++ L+ + P W + Sbjct: 316 LALLRL-----PIREDAPLSCGAATLTPRLPGWMR 345 >gi|291241889|ref|XP_002740842.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 369 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 27/297 (9%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKI 60 L N++ I+V G+ A LQ +IT D L + + +L QG++L +I I Sbjct: 50 KCAKLINRNIIRVSGRDASDLLQGLITNDASLLTRQNPSLYTMLLNQQGRVLYDAIIYGI 109 Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEH 108 +E +++E + L + +K+R V I E+ V + Sbjct: 110 YKEGNDEAVYLVECENELAPELQKHMKMFKIRKKVDILNVSSEYEVWAAYEVFGKVDYPT 169 Query: 109 TFSNSS--FIDERFSIADVLL--HRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDF 160 + N S D R S L + E I D+ YH R HGI + + D Sbjct: 170 SMVNESICVADPRLSTFGRRLVVPKNTNLPELIPGLTEMDVHNYHTHRYIHGICEGSNDL 229 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPS 216 P ++ +D +NG+S KGCY+GQE+ +R H +IRKR M +T T D + Sbjct: 230 PVGNALPLESNLDYMNGVSFHKGCYLGQELTARTHHTGVIRKRLMPVTLTNYENDAIING 289 Query: 217 GSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + + + G +G LA+ RI + A + + ++ S P W+ Sbjct: 290 NTTVSTKNGKNAGKFRNHIGIYGLALLRIAHTQGILTVPSA-DGNLITLEPSVPKWW 345 >gi|260428381|ref|ZP_05782360.1| glycine cleavage T protein [Citreicella sp. SE45] gi|260422873|gb|EEX16124.1| glycine cleavage T protein [Citreicella sp. SE45] Length = 244 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 14/249 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + ++V G FLQ ++T DV L + +A+LTPQGK F + ED +++ Sbjct: 5 RKVLRVSGPETEHFLQGLVTNDVALLKDGL-VYAALLTPQGKYRADFFLVPDGED-ILVD 62 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + + L L YKLR+ V I + ++ D R Sbjct: 63 VAEGLYEGLAKALTMYKLRAKVTISETD----IAVARGPGPAPEGAYADPRDPRMG---- 114 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 W + + + LR+ + + + P T F +A + L+G+ KGCY+GQ Sbjct: 115 --WRAYDGRPDESADWDALRVAACVPESGIELTPDT-FILEAGFERLHGVDFRKGCYVGQ 171 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + + P GS I + G L + +A R D+ Sbjct: 172 EVTARMKHKVELRKGLVTVEVNGAAP-VGSEITAGEKAAGVLYTQAEGRGIAHLRFDRAG 230 Query: 249 HAIKKGMAL 257 + G A+ Sbjct: 231 DEMTAGDAV 239 >gi|84516026|ref|ZP_01003387.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] gi|84510468|gb|EAQ06924.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] Length = 243 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S++ + + G + FLQ ++T DV I +A+LTPQGK + F + ++D Sbjct: 1 MSDRMVLSISGVDRVSFLQGLVTNDVTRAAQGI-IYAALLTPQGKFIADFFVL-GQDDRL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ +S +L+ +L Y+LR+ V I + + + + D R + Sbjct: 59 LVDVAQSHGATLLQRLSMYRLRAAVQIGQTDL----VVSRGTGSTPPGALPDPRHA---G 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + R +G ++ SD + LR+ H I + + P T +A + L+G+ KGCY Sbjct: 112 MGWRFYGDSDI--SDQTDWDALRVAHLIPETGIELTPETYV-LEAGFEALHGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+V+R++H+ +RK + D G PI D + G L + G A+A R D Sbjct: 169 VGQEIVARMKHKTELRKGLARVR-IDGAAQPGDPITADGKDTGVLHTISGDHAIAYLRFD 227 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 228 RATGPMQAGSA 238 >gi|330925183|ref|XP_003300945.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1] gi|311324671|gb|EFQ90954.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1] Length = 428 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 119/318 (37%), Gaps = 50/318 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62 +L ++ I + G A FLQ +IT +V SA L QG++L + E Sbjct: 96 AHLPHRRLISLSGPDAAKFLQGLITNNVDP-NRPKPFYSAFLNAQGRVLWDVFVWVWPEL 154 Query: 63 ------DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFS--- 111 T +E+D + + L L +KLRS V IE + V +W Sbjct: 155 LAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISEDEVCVWAAWGSAADAPVDA 214 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASD------IKTYHELRINHGIVDPNTDFLPSTI 165 N + +D R A + K + Y R +GI + + Sbjct: 215 NDAMVDMRDPRAPNFHRYLAYADVKTLVPGTEPLGVTEYQVERYRYGIAEGPDEIPRENA 274 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPPS 216 P + +DL +GI KGCY+GQE+ R +H ++RKR + IT Sbjct: 275 LPMEYNIDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITLQLHPLAEPVETIRVEP 334 Query: 217 GSPI---------LTDDIEIGTLGVVVGKKALAIARID-----KVDHAIKKGMA------ 256 GS I L G L VG LA+ R++ K+D ++ Sbjct: 335 GSEIKTIDDTHIGLKRGRARGKLIANVGDVGLALCRLEQMTSMKIDGSMHSAKPQMRFAC 394 Query: 257 LTVHG--VRVKASFPHWY 272 TV G V V+A W+ Sbjct: 395 YTVDGDVVEVQAVLHDWF 412 >gi|326429004|gb|EGD74574.1| hypothetical protein PTSG_05939 [Salpingoeca sp. ATCC 50818] Length = 372 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 28/294 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++S ++V G FLQ ++T DV+ + K R S +L P+G++L+ + +I + F Sbjct: 76 DSRSVLQVDGADGAEFLQGMLTNDVVEMEDKDVRFSMLLNPKGRVLVDAFVHRISPERFY 135 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSF--------I 116 L++ R S+ D ++LRS V ++ VV E++ + Sbjct: 136 LDLPRPLIRSVADYFTRFRLRSQVEFRDVSDTVDSVVGMNVDENSLKQLTANFDVLNFQP 195 Query: 117 DERFSIADVLLHRTWG-----------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 D R + W ++ A D TY +LRI+ G + D P Sbjct: 196 DPRIHQTEPYCRSLWRGVCTRPSTDSDSDDNAAHDEHTYQQLRISMGFGEGPVDHQPKKS 255 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI--LT 222 P +D L+G+S TKGCYIGQE+ +R H + RKR M IT GS + Sbjct: 256 LPLQCNLDYLHGVSWTKGCYIGQELTARTHHMGMTRKRLMPITLHAPTTVAPGSKVINTE 315 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG----VRVKASFPHWY 272 +G + G ALA+ R++ A + V +P W+ Sbjct: 316 TGKAVGDVRSQAGVHALAMIRLEPAKGAQLAVVPQDGDEPGDMCPVSLHWPKWW 369 >gi|254463496|ref|ZP_05076912.1| glycine cleavage system T protein, aminomethyltransferase [Rhodobacterales bacterium HTCC2083] gi|206680085|gb|EDZ44572.1| glycine cleavage system T protein, aminomethyltransferase [Rhodobacteraceae bacterium HTCC2083] Length = 247 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 15/254 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++ + ++V G A FLQ ++T DV L + +A+LTPQGK + F + + D Sbjct: 2 IHPETRRLLRVTGADARAFLQGLLTNDVQKLDQGL-VYTAMLTPQGKYIADFFLVP-DGD 59 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L+ D S+ D+L +L YKLR++V I + +F+D R + Sbjct: 60 AILLDTDASQTDALAKRLTMYKLRADVTIADDKRS----VSRGLGPIPEGAFVDPRLAAL 115 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + + +IA D+ + L + H + + P + + + LNG+ KG Sbjct: 116 GWRGY-----DGQIAQDV-DWTALNVTHSVPRAGIELTPDSFL-LEMGFERLNGVDFKKG 168 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALAIA 242 CY+GQEV +R++H+ +RK ++ T P G+ I T+ D GTL G KALA Sbjct: 169 CYVGQEVTARMKHKTQLRKGLAQVSITGSAP-IGTDITTEADKVAGTLFSQSGDKALAYV 227 Query: 243 RIDKVDHAIKKGMA 256 R D+ +K A Sbjct: 228 RFDRATGPLKAKDA 241 >gi|83854688|ref|ZP_00948218.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] gi|83842531|gb|EAP81698.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] Length = 256 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+ Sbjct: 10 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLS-ADGDSV 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + D+L+ +L YKLR++V I+ + + ++ D R + Sbjct: 68 LLDVAEADADALVQRLTMYKLRADVTIDATEL----HLHRGLENSPDDAYSDPRDARMGW 123 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +R + LR+ + I + + S F + + LNG+ KGCY Sbjct: 124 RAYRDTPQTDDTTDWD----ALRVTYMIPETGAELT-SDSFILEMGFERLNGVDFRKGCY 178 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + + G+ I D GT+ G ALA R D Sbjct: 179 VGQEVTARMKHKTELRKGLAQVEISAPV-EPGTDITADGKPAGTIFTRTGTHALAYLRYD 237 Query: 246 KVDHAIKKGMA 256 + A++ G A Sbjct: 238 RAKAAMQAGDA 248 >gi|85707165|ref|ZP_01038252.1| aminomethyl transferase family protein [Roseovarius sp. 217] gi|85668324|gb|EAQ23198.1| aminomethyl transferase family protein [Roseovarius sp. 217] Length = 270 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 14/249 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ GK A+ FLQ ++T D+ L + +AILTPQGK L FL+S+ D L+ Sbjct: 25 RRILQITGKDALHFLQGLVTNDLNKLDQGL-VYAAILTPQGKYLADFLLSR-HGDAIRLD 82 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D S L+ +L YKLR++V + + + D R L Sbjct: 83 VDDSLAPMLLQRLTLYKLRADVTLTQTDLK----VLRGTGPAPEGALTDPRHPD---LGW 135 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+GQ Sbjct: 136 RLYGDAE--GDDGSDFERIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVGQ 192 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKV 247 EV +R++H+ +RK ++ P GS I + GTL G + +A R D+ Sbjct: 193 EVTARMKHKTELRKGLTMVAVHGTAP-IGSEIRTPEGKPAGTLYTQSGGRGIAYLRHDRA 251 Query: 248 DHAIKKGMA 256 + G A Sbjct: 252 AAGMIAGEA 260 >gi|307190794|gb|EFN74663.1| Putative transferase C1orf69, mitochondrial [Camponotus floridanus] Length = 371 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 55/319 (17%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKIEE- 62 L+++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K EE Sbjct: 41 RLNDRSILRVSGNEASTFLQGLITNDMKHLVEGTSNIYTLFLNIRGRVMYDAIVYKTEES 100 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID---- 117 + + +E D +SL L Y++R V I+ I V ++ + N +D Sbjct: 101 NMYYIECDLQVVESLQRHLQMYRIRRKVDIKHIGDKINVWSMFDSTKRYDNRPAVDENGK 160 Query: 118 -----------------------------ERFSIADVLL-----------HRTWGHNEKI 137 R + + + + + Sbjct: 161 RQLEGMIFPCGTLNSKASKFIDNIMIYEDPRLPDLGLRILAESQIDKREITKHLDSDVFL 220 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + ++ Y R GI + D P P + D L+G+S KGCY+GQE+ +R H Sbjct: 221 SENVANYKAFRYKLGIGEGVHDLPPGKALPLEINCDYLHGVSFHKGCYVGQELTARTYHT 280 Query: 198 NIIRKRPMIITGTD--DLPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 ++RKR M + D P + + D D +G + K L + RI++ A + Sbjct: 281 GVVRKRLMPLMFDSIVDKPLAYDEKILDESDNVVGKFRGYIDKYGLGLMRINESLSARR- 339 Query: 254 GMALTVHGVRVKASFPHWY 272 L V G+ +K P W+ Sbjct: 340 ---LNVLGINLKVVKPTWW 355 >gi|254487881|ref|ZP_05101086.1| glycine cleavage system T protein, aminomethyltransferase [Roseobacter sp. GAI101] gi|214044750|gb|EEB85388.1| glycine cleavage system T protein, aminomethyltransferase [Roseobacter sp. GAI101] Length = 247 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +K+ G + FLQ +IT D+ L +A+LTPQGK ++ F + E Sbjct: 1 MNDRRILKLTGADTLDFLQGLITNDIRKLEQGP-IYAALLTPQGKFMVDFFLVAAGE-AV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ D+L+ +L Y+LR++V I + + + D R + Sbjct: 59 LLDVAEPFADALVQRLNMYRLRADVQIAATELY----LHRSLGAAPDDGYSDPRDAQMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +R ++ D + LR+ H I + + P + F + + LNG+ KGCY Sbjct: 115 RAYRDVPQSD----DTTDWDALRVAHSIPENGIELTPDS-FILEMGFERLNGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK I + + G+ I D GT+ G ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQINISAPV-SVGADITADGKPAGTVLTQSGTSALAYLRFD 228 Query: 246 KVDHAIKKGMA 256 + A++ A Sbjct: 229 RAKQAMQAEDA 239 >gi|83950541|ref|ZP_00959274.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] gi|83838440|gb|EAP77736.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] Length = 243 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 13/249 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + I + GK A FLQ ++T D+ L + +A+LTPQGK + F + E T L+ Sbjct: 3 RRIIDISGKDARSFLQGLVTNDLGKLDQGL-VYAALLTPQGKYMADFFLLARGE-TIHLD 60 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D S D L+ +L Y+LR++V + + + D R L Sbjct: 61 ADASLGDMLMQRLAMYRLRADVQLS----ESALKLSRGTGPAPEGALADPRHP---ALGW 113 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G + D + +R+ H I + ++ P T +A + LNG+ KGCY+GQ Sbjct: 114 RLYGAQD--GEDGSDFDAIRVAHCIPETGSELGPETYI-LEAGFERLNGVDFRKGCYVGQ 170 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + P G+ I + +GTL G +A+A R D+ Sbjct: 171 EVTARMKHKTELRKGFRTVEIEGAAP-LGTEITAEGKPVGTLHTQAGSQAIAYLRFDRAR 229 Query: 249 HAIKKGMAL 257 ++ G A+ Sbjct: 230 GDMQAGDAI 238 >gi|83941198|ref|ZP_00953660.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] gi|83847018|gb|EAP84893.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] Length = 247 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+ Sbjct: 1 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLS-ADGDSV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ + D+L+ +L YKLR++V I+ + + + ++ D R + Sbjct: 59 LLDVAEADADALVQRLTMYKLRADVTIDATGL----HLHRGLESAPDDAYSDPRDARMGW 114 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +R + LR+ + I + + S F + + LNG+ KGCY Sbjct: 115 RAYRDTPQTDDTTDWD----ALRVTYMIPETGAELT-SDSFILEMGFERLNGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + + + G+ I D GT+ G ALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQVEISAPV-EPGTDITADGKPAGTIFTRTGTHALAYLRYD 228 Query: 246 KVDHAIKKGMA 256 + A++ G A Sbjct: 229 RAKAAMQAGDA 239 >gi|297809523|ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata] gi|297318482|gb|EFH48904.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata] Length = 393 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 124/349 (35%), Gaps = 81/349 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44 + L ++S ++ G + FLQ ++T DV +A+ Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVSTPPMYAAL 91 Query: 45 LTPQGKILLYFLISKIEEDT---------------------FILEIDRSKRDSLIDKLLF 83 LTPQG+ L F + + ++D D L++ L Sbjct: 92 LTPQGRFLYDFFLYSPSKSEEKLNRTGSGPGSDSGHDGSVELFADVDVDVLDELLETLKK 151 Query: 84 YKLRSNVIIEIQPINGVVLSWN---------------------QEHTFSNSSF-----ID 117 Y+LRS V IE + W E T S + + D Sbjct: 152 YRLRSKVDIEN--VGEEFSCWQRYGRNLSGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209 Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 R + +D Y R+ HG+ + + + P + Sbjct: 210 PRLECLGYRSIFPADATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILTD-- 223 LN IS KGCY+GQE+++R HR +IRKR + + D +G+ ++ Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKEVNQKIAAGAEVVESGT 329 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++GT+ +G + + + R+++ + + V+V+A P W+ Sbjct: 330 GKKMGTVSTALGSRGMGVMRVEEAFKPSAELTVKDLEDVKVEAIRPTWW 378 >gi|209964961|ref|YP_002297876.1| aminomethyltransferase, putative [Rhodospirillum centenum SW] gi|209958427|gb|ACI99063.1| aminomethyltransferase, putative [Rhodospirillum centenum SW] Length = 298 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 22/290 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + + V G + FLQ +++ DV + A +A+LT QGK L F I+ + Sbjct: 8 AVPLPQRGVLAVGGPDRVSFLQGLVSNDVARVTEGRAVWAALLTAQGKYLHDFCIAALG- 66 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106 D +L+ + ++RD L+ +L Y+LR+ V +E + V + Sbjct: 67 DALLLDCEAARRDDLLRRLRPYRLRAQVTLEDRTDTLAVSALVGTAAPAALELPAEPGAA 126 Query: 107 EHTFSNSSFIDERFSIADVLL--HRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161 ++F+D R + + L R G + R+ GI D + D + Sbjct: 127 RTVAGGTAFVDPRHAALGLRLILPREGGATALAGFRQGGEADWDSARLALGIPDGSRDLV 186 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 P + D L G++ KGC++GQE+ +R ++R +IRKR + + LP G+P+ Sbjct: 187 PEKSILLENGFDELQGVAWDKGCWMGQELTARTRYRGLIRKRLLPVEVCGPLPEPGTPVF 246 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + E G + G + LA+ R+++V+ A +G++ + P W Sbjct: 247 LGEREAGEMRSGHGGQGLALLRLEEVERAAAEGLSFRAGEATLSPRRPSW 296 >gi|224124952|ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|222871091|gb|EEF08222.1| predicted protein [Populus trichocarpa] Length = 392 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 84/354 (23%), Positives = 129/354 (36%), Gaps = 90/354 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYK---------------IARGSAILTP 47 L ++S I+ G I FLQ ++T DV LP +A LTP Sbjct: 27 LKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGTTSYVPTPNLPSVYVPPMYAAFLTP 86 Query: 48 QGKILLYFLISK--IEED-----------------TFILEIDRSKRDSLIDKLLFYKLRS 88 QG+ L + + + E+ ++D S D L+ Y+LRS Sbjct: 87 QGRFLYDLFLYRKPLGEEKLDGSGSGPGSDSGGDLELFADVDSSVLDELLLTFKRYRLRS 146 Query: 89 NVII-----------------------EIQPINGVVLSWNQEHTFSNSS----------F 115 V I E +P V S + SS F Sbjct: 147 KVEIDNVAEDFSCWQRFGGNLAEKSKGEEEPEAASVGSGPGVDHSAMSSSHGNDVGWQWF 206 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + + K Y RI +GI + +T+ P + Sbjct: 207 KDPRVDCLGLRGVFPSKETPPLVESDKETNELNYLLWRIENGIAEGSTEIPIGEAIPLEY 266 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPI--L 221 ++ LN IS KGCY+GQE ++R HR +IRKR + + DD GS + Sbjct: 267 NLEGLNAISFDKGCYVGQEFIARTHHRGVIRKRLLSLAFLDDSGKEVEQKVGPGSEVINT 326 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 +IG + +G + L + R+ A K +LT+ G ++V+A P W+ Sbjct: 327 ASGKKIGYVTTALGCRGLGVLRL---KEAFKGSGSLTIQGQEDIKVEAIRPKWW 377 >gi|255261983|ref|ZP_05341325.1| glycine cleavage T protein [Thalassiobium sp. R2A62] gi|255104318|gb|EET46992.1| glycine cleavage T protein [Thalassiobium sp. R2A62] Length = 241 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ G A PFLQ+++T D+ + +A+LTPQGK +L F + +D ++ Sbjct: 2 RKVLELTGSDATPFLQSLVTNDINK---RGLVYTALLTPQGKFMLDFFVLN-HDDALWID 57 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + L +L Y+LR++V+I I ++ D R + Sbjct: 58 VAADHAAGLAQRLTMYRLRADVMIAELDIT----VSRGTGDAPIGAYPDPRSP---AMGW 110 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G + + +D + LR+ + + + P + + + LNG+ KGCY+GQ Sbjct: 111 RDYGEAQDMPTD---WDALRVAQMVPQLDAELGPDSYI-LEMGFERLNGVDFKKGCYVGQ 166 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 E+V+R++H+ +RK ++ ++ L G+ I ++ +GT+ V G ALA R D+ + Sbjct: 167 EIVARMKHKTELRKGLARVSSSEPLSE-GAEITSNGKPVGTVHTVSGTSALAYLRFDRAN 225 Query: 249 HAIKKGMALTVHGVRV 264 I G+ +T+ V Sbjct: 226 EMISDGINVTLEERSV 241 >gi|126462652|ref|YP_001043766.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17029] gi|126104316|gb|ABN76994.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter sphaeroides ATCC 17029] Length = 255 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59 M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 ++I D + +L Y+LR++V I ++ V + D R Sbjct: 61 TGG-RLFIDISDRLADPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G ++ + +R+ H I + + +P + ++ + L+G+ Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+ Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ + ++ G A Sbjct: 230 AYVRHDRAEGEMRAGEA 246 >gi|79470337|ref|NP_192950.2| aminomethyltransferase [Arabidopsis thaliana] gi|22655070|gb|AAM98126.1| putative protein [Arabidopsis thaliana] gi|30725630|gb|AAP37837.1| At4g12130 [Arabidopsis thaliana] gi|332657699|gb|AEE83099.1| glycine cleavage T-protein family protein [Arabidopsis thaliana] Length = 393 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 123/349 (35%), Gaps = 81/349 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAI 44 + L ++S ++ G + FLQ ++T DV +A+ Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYAAL 91 Query: 45 LTPQGKILLYFLIS---------------------KIEEDTFILEIDRSKRDSLIDKLLF 83 LTPQG+ L F + + ++D D L++ L Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151 Query: 84 YKLRSNVIIEIQPINGVVLSWN---------------------QEHTFSNSSF-----ID 117 Y+LRS V IE + W E T S + + D Sbjct: 152 YRLRSKVDIEN--VAEEFSCWQRYGRNLTGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209 Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 R + +D Y R+ HG+ + + + P + Sbjct: 210 PRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILTD-- 223 LN IS KGCY+GQE+++R HR +IRKR + + D +G+ ++ Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKIAAGAEVVESGT 329 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++GT+ +G + + + R+++ + V+V+A P W+ Sbjct: 330 GKKMGTVSTALGSRGMGVMRVEEAFKPSAELAVKDSEEVKVEAIKPTWW 378 >gi|170740023|ref|YP_001768678.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46] gi|168194297|gb|ACA16244.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46] Length = 277 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 5/271 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ ++T +V TLP AR A+LTPQGK+L+ FLIS+ Sbjct: 1 MPIALLPDRAVLSVAGDDAPGFLQGLVTCNVETLPPGEARLGALLTPQGKVLIDFLISRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E F L++ R+ L +L Y+LR+ V P+ V+ W + + D R Sbjct: 61 AE-GFALDVARALLPDLTRRLTLYRLRAKVAFAEAPLR-VLAVWGG--PPAGAWLRDGRL 116 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 H G + + Y RI G+ + DF FPH+ALMD L G+ Sbjct: 117 PALGWRRHAGEGEGPAPDATAEDYAAHRIGLGVPEGGADFALGDAFPHEALMDQLGGVDF 176 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEVVSR+QHR R R + + G+ + +G G G + L Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPVAYAGARAAAPGTAVTAGARALGQTGGAAGARGL 236 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ R+D++ A+ G A+ G+ ++ P Sbjct: 237 ALLRLDRLADAVAAGEAIEAGGLALRVERPA 267 >gi|221639671|ref|YP_002525933.1| glycine cleavage T protein [Rhodobacter sphaeroides KD131] gi|221160452|gb|ACM01432.1| Glycine cleavage T protein [Rhodobacter sphaeroides KD131] Length = 255 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59 M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + + Sbjct: 1 MPGEIATDRKLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 ++I + + +L Y+LR++V I ++ V + D R Sbjct: 61 TGG-RLFIDISDRLAEPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G ++ + +R+ H I + + +P + ++ + L+G+ Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+ Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ + ++ G A Sbjct: 230 AYVRHDRAEGEMRAGEA 246 >gi|126732783|ref|ZP_01748578.1| aminomethyl transferase family protein [Sagittula stellata E-37] gi|126706779|gb|EBA05850.1| aminomethyl transferase family protein [Sagittula stellata E-37] Length = 245 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 14/248 (5%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +++ ++V G A FLQ ++T DV L + +A+LTPQGK F + ED ++ Sbjct: 5 SRTVLRVHGAKAREFLQGLVTNDVARLEKGL-VYAALLTPQGKYRADFFLVPDGED-VLI 62 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 +++ + SL+ L YKLR+ V I V+ T +F D R Sbjct: 63 DVEVALAVSLMQALTMYKLRTPVEITETD----VVVTRGTGTPPEGAFADPRDPRLGWRG 118 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 + E + LR+ + + P T F +A + LNG+ KGCY+G Sbjct: 119 YAGQPAGE------ADWDALRVAACVPRAGVELTPDT-FILEAGFERLNGVDFKKGCYVG 171 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 QEV +R++H+ +RK + P G+ I+++ E GTL G A+A R D+ Sbjct: 172 QEVTARMKHKTELRKGLARVAIDGHAP-IGTKIVSNGKEAGTLFTQSGDSAIAYLRFDRA 230 Query: 248 DHAIKKGM 255 + G Sbjct: 231 GDDMMAGD 238 >gi|322826129|gb|EFZ30885.1| hypothetical protein TCSYLVIO_2815 [Trypanosoma cruzi] Length = 317 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 32/302 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60 LS++S I+V G +A FLQ + T D+ L + L G+++ + + Sbjct: 5 CLLSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEH 108 + ++++ R D+L D LL ++R + I+ VV++ + +E Sbjct: 65 HGGDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVATSSYGNGGIYEEEEK 124 Query: 109 TFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 T SS F+D R LH++ + + Y GI + F Sbjct: 125 TPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPDVFK 184 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDD 212 P+ FP + D L G+S KGCY+GQE+ R + RKR + + G Sbjct: 185 PARSFPFECNTDFLRGVSFQKGCYLGQELTHRTHVMLVTRKRTVPLRFPSFQEETGGERR 244 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHW 271 G +L D ++G L V G L + R+ VD A + L + V V + P W Sbjct: 245 SVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIPGW 304 Query: 272 YK 273 ++ Sbjct: 305 WE 306 >gi|83945377|ref|ZP_00957725.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis alexandrii HTCC2633] gi|83851211|gb|EAP89068.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis alexandrii HTCC2633] Length = 298 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 9/268 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L +++ I + G A FLQ ++T + A SA+LTPQGK+L I E Sbjct: 29 LTTLPDRAVIAITGAEARGFLQRVLTQGPEGVKPGAAMFSALLTPQGKVLADLFILDDGE 88 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----FSNSSFIDE 118 + ++ S+ D+L+ + Y++R++ IE + V+ + + + S+ D Sbjct: 89 GGLLFDVPASEADALLKRFTLYRMRADATIERREDLSVIAAAGEPAEELRMVALSAAPDP 148 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R + + R SD Y RI G + +D+ P+ +F D DLL+GI Sbjct: 149 RNA---AIGWRGVAPAGGPDSDRDLYERARIQAGAPELGSDYGPAEVFSTDVNHDLLSGI 205 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 + KGC++GQEV SR+ + +RKR + + G + + + +G + V G A Sbjct: 206 NYKKGCFVGQEVASRMHRKGGVRKRSVRLQGDG--LKTQDEVKVGETVLGPVSSVSGDHA 263 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKA 266 LA RID++ ++ G L V+G V Sbjct: 264 LARLRIDRLKDGLQAGDTLKVNGAPVTL 291 >gi|260575028|ref|ZP_05843029.1| folate-binding protein YgfZ [Rhodobacter sp. SW2] gi|259022650|gb|EEW25945.1| folate-binding protein YgfZ [Rhodobacter sp. SW2] Length = 251 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISK 59 M + + + V GK A+ FLQ +++ D+ L +A+L+PQGK L F + Sbjct: 1 MQGEAATGRRLVAVAGKDALEFLQGLVSNDLRPLAKGPGIVWTALLSPQGKYLADFFVV- 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + + +L++ ++ + +L Y+LR++V I P++ + D R Sbjct: 60 AQPEGLLLDLPEVLAEATLRRLAMYRLRADVQIAESPLS----VSRGLGLAPADALPDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G I + +R+ H I + + +P + +A + L+G+ Sbjct: 116 DPALGWRRYGAPGGPAVI-----DWDAIRVAHCIPESGIELIPDDSYILEAGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK +++ D + P G+ IL D G + G + + Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVLVR-VDGVVPIGAEILADGKPAGQVFTQSGGQGI 229 Query: 240 AIARIDKVDHAIKKGM 255 A R D+ + G Sbjct: 230 AFLRFDRASGEMLAGD 245 >gi|255537089|ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis] gi|223549510|gb|EEF50998.1| aminomethyltransferase, putative [Ricinus communis] Length = 391 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 123/355 (34%), Gaps = 84/355 (23%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSA 43 S+ L+++S I+ G + FLQ ++T D+ + +A Sbjct: 22 STSLLNSRSVIRFSGPDTVKFLQGLLTNDIRRFDETPSEATSFLPTPNLATVSVPPMYAA 81 Query: 44 ILTPQGKILLYFLISKI-------------------EEDTFILEIDRSKRDSLIDKLLFY 84 +LTPQG+ L + + + ++D S D L+ Y Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPGSDSNGSVELLADVDTSVLDELLHTFQRY 141 Query: 85 KLRSNVIIE----------------------IQPINGVVLSWN-----------QEHTFS 111 +LRS V IE + W Q Sbjct: 142 RLRSKVEIENVAGEFSCWQRFGGNLTETSKVADEPEAASVGWGSGVDRAARSSTQGDGHG 201 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIF 166 F D R + ++ K Y RI +G+ + +T+ Sbjct: 202 WQWFKDPRLDCLGFRGIFPSNQTPPLVEADKETNEKNYQLWRIENGVAEGSTEIPKGEAI 261 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSP 219 P + + LN IS KGCY+GQE+V+R HR +IRKR + + DD GS Sbjct: 262 PLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDNGTEVEEKVAPGSE 321 Query: 220 I--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + T ++G + +G + L + R+++ + ++V+ P W+ Sbjct: 322 VIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQDDLKVETIRPKWW 376 >gi|332558691|ref|ZP_08413013.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N] gi|332276403|gb|EGJ21718.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N] Length = 255 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59 M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 ++I + + +L Y+LR++V I ++ V + D R Sbjct: 61 TGG-RLFIDISDRLAEPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALRDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G ++ + +R+ H I + + +P + ++ + L+G+ Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+ Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ + ++ G A Sbjct: 230 AYVRHDRAEGEMRAGEA 246 >gi|46125843|ref|XP_387475.1| hypothetical protein FG07299.1 [Gibberella zeae PH-1] Length = 396 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 126/340 (37%), Gaps = 70/340 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISKI 60 L+++ I V G + FLQ IITA+V T LP A LT G++L + Sbjct: 45 AALTSRRLISVTGPDSAKFLQGIITANVTTKDGLPRTDGFYGAFLTATGRVLYDVFVYPN 104 Query: 61 --------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT- 109 EE +++E+D +L + YKLR+ + + + + V +W+ + Sbjct: 105 HNSPGFSSEEPAYLIEVDAGHAPTLAKHIKRYKLRAKLTVRLLGEDEASVWHAWDDSNGA 164 Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTD 159 +N S D R L + + ++ + + Y R +GI + + Sbjct: 165 NWDSIVKLTNLSLQDPRAPGLGYRLLQLDQNTPQVDLEKTTEEAYTIRRYINGIAEGQDE 224 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPS- 216 P + MD++NGI KGCY+GQE+ R +HR ++RKR + I T+ PP+ Sbjct: 225 ISKEHALPQETNMDIMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYETEHAPPTT 284 Query: 217 ---GSPILTD----------------------DIEIGTLGVVVGKKALAIARI------- 244 + + G VG L + R+ Sbjct: 285 LQYHADVAASSLESVSADMIPRDTSIGRFEKRGRSAGKWLKGVGNIGLGLCRLENMTDVT 344 Query: 245 ---DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273 D A + V+VKA P W + Sbjct: 345 LPGDAASGAFNPEDEFVLDWGEEENRNRVKVKAFVPDWLR 384 >gi|189199100|ref|XP_001935887.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982986|gb|EDU48474.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 428 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 115/289 (39%), Gaps = 39/289 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62 L ++ I + G A FLQ +IT +V L +A L QG++L + E Sbjct: 96 APLPHRRLISLSGPDAAKFLQGLITNNVD-LNQPKPFYAAFLNAQGRVLWDVFVWVWPEL 154 Query: 63 ------DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTF---S 111 T +E+D + + L L +KLRS V IE V +W + Sbjct: 155 LAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISGDEVCVWAAWGSAADARVNA 214 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPST 164 N + +D + A HR + + A + Y R +GI + + Sbjct: 215 NDTMVDMQDPRAPNF-HRYLAYADVKALVPGTEPLSVTEYQIERYRYGIAEGPDEIPRED 273 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPP 215 P + DL +GI KGCY+GQE+ R +H ++RKR + IT + Sbjct: 274 ALPMEYNFDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITLQLHPLAEPVEKIIVE 333 Query: 216 SGSPI-LTDDIEI--------GTLGVVVGKKALAIARIDKVDHAIKKGM 255 SGS I DD +I G VG LA+ R++++ + G Sbjct: 334 SGSEIKTIDDTQIGLKRGRARGKFIANVGDVGLALCRLEQMTSMVIDGS 382 >gi|77463816|ref|YP_353320.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides 2.4.1] gi|77388234|gb|ABA79419.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides 2.4.1] Length = 255 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59 M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + + Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 ++I D + +L Y+LR++V I ++ V + D R Sbjct: 61 TGG-RLFIDISDRLADPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + G ++ + +R+ H I + + +P + ++ + L+G+ Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+ Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ + ++ G A Sbjct: 230 AHVRHDRAEGEMRAGEA 246 >gi|126725874|ref|ZP_01741716.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150] gi|126705078|gb|EBA04169.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150] Length = 247 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 12/245 (4%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ V G + FLQ+++T DV + +A+LTPQGK L F + + D ++ Sbjct: 4 SRQVFAVGGADRVKFLQSLVTNDVEKAKDGL-VYTALLTPQGKYLFDFFMV-AQGDRILI 61 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 + D + +L +L+ YKLR++V IE + + D R + Sbjct: 62 DCDGEQAAALSGRLMMYKLRADVTIEPLDLY----VHRGNDLLPVDGYADPRHAALGWRA 117 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 +R E+ A + + L I + + + + + + + + LNGI KGCY+G Sbjct: 118 YR-----EQPAQETPDWTALNIANLVPETGAELVSGEGYILEMNFEALNGIDFRKGCYVG 172 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 QE+++R++H+ +RK +T + G I + IG L G +ALA R D++ Sbjct: 173 QEIMARMKHKTELRKGLARVTVDGET-SFGDEITSGGKVIGKLLTRAGDQALAYLRFDRI 231 Query: 248 DHAIK 252 I+ Sbjct: 232 KADIQ 236 >gi|295670505|ref|XP_002795800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226284885|gb|EEH40451.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1460 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 131/352 (37%), Gaps = 83/352 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58 L +++ I V G+ + FLQ +IT ++LT K +A L G++L I Sbjct: 1034 YAQLPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIPKTGFYAAFLNAPGRVLNDVFIY 1093 Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQE 107 + + +++E+D+++ +L+ L +KLRS + + + WN+E Sbjct: 1094 PVPPNDSFNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEE 1153 Query: 108 HTF--------------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYH 145 + D R L + E++ D TY+ Sbjct: 1154 DADLLTEYDFELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYN 1211 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 RI HGI + + + + P + MD++ I KGCY+GQE+ R HR ++RKR + Sbjct: 1212 LRRILHGIPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRIL 1271 Query: 206 IITGTD-------------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIA 242 + D LPP+G+ I G VG LA+ Sbjct: 1272 PVRFYDINEPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALC 1331 Query: 243 RIDKVD---------------------HAIKKGMALTVHGVRVKASFPHWYK 273 R++ + A +G ++VKA P W + Sbjct: 1332 RLEMMTDISFTEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 1383 >gi|225426884|ref|XP_002262786.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 407 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 90/354 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47 L ++S ++ G + FLQ ++T DV + +LTP Sbjct: 42 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 101 Query: 48 QGKILLYFLISKIEEDT-------------------FILEIDRSKRDSLIDKLLFYKLRS 88 QG+ L + + + + ++D + D L+++ Y+LR+ Sbjct: 102 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPGGRLELLADVDATVLDELLERFNKYRLRA 161 Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115 +V+IE + + W + +S F Sbjct: 162 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGGAVDPAGTSSSHVNSHGWQWF 221 Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + +D K Y R+ G+ + +T+ L P + Sbjct: 222 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 281 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222 + LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++ Sbjct: 282 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSEVINA 341 Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 + GT+ + + L + R++ A+K LT+ G V+V+A P W+ Sbjct: 342 VSGKKAGTVTTALECRGLGLLRLE---EALKGPSKLTIQGQEDVKVEAIRPEWW 392 >gi|163867998|ref|YP_001609202.1| aminomethyltransferase [Bartonella tribocorum CIP 105476] gi|161017649|emb|CAK01207.1| aminomethyltransferase [Bartonella tribocorum CIP 105476] Length = 290 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 151/272 (55%), Gaps = 6/272 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K Sbjct: 6 NAICLKNRGIIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGKR- 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119 ED + ++I+ S D+L +LL YKLR V I V +SW E N S+F+D+R Sbjct: 65 EDGYFIDIEISLADTLYKRLLLYKLRKKVEITQPLQELVTVSWKNESDTLNFDSNFVDKR 124 Query: 120 FSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 F + ++ R +G +AS D T+++LRI + I + D+ IFPHD D +NG+ Sbjct: 125 FPEQEKII-RIYGKIPFLASEDYDTWNQLRIRYAIAESGQDYEVGKIFPHDINYDQINGL 183 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCYIGQE+VSR+ HR R+R +II DL P S I +G LG V +A Sbjct: 184 SFNKGCYIGQEIVSRMHHRRAARRRILIIKSQCDLSPQ-SSIEAGTKVLGHLGTCVTNEA 242 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ RID V A+ + TV + V Sbjct: 243 LALMRIDHVKDAMDHNIPFTVKNIPVTIHIAE 274 >gi|225684495|gb|EEH22779.1| glycine cleavage T-protein [Paracoccidioides brasiliensis Pb03] Length = 438 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 131/352 (37%), Gaps = 83/352 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58 L +++ I V G+ + FLQ +IT ++LT K +A L G++L I Sbjct: 47 YAQLPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIPKTGFYAAFLNAPGRVLNDVFIY 106 Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQE 107 + + +++E+D+++ +L+ L +KLRS + + + WN+E Sbjct: 107 PVPPNDSYNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEE 166 Query: 108 HTF--------------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYH 145 + D R L + E++ D TY+ Sbjct: 167 DADLLTEYDIELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYN 224 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR ++RKR + Sbjct: 225 LRRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRIL 284 Query: 206 IITGTD-------------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIA 242 + D LPP+G+ I G VG LA+ Sbjct: 285 PVRFYDINDPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALC 344 Query: 243 RIDKVD---------------------HAIKKGMALTVHGVRVKASFPHWYK 273 R++ + A +G ++VKA P W + Sbjct: 345 RLEMMTDISFTEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 396 >gi|152013705|gb|ABS19968.1| glycine cleavage T protein [Artemia franciscana] Length = 231 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 3/202 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 N+ ++V G + PFLQ +IT D+ L + + + L QG++L ++ + ++ Sbjct: 32 PNRGLVRVSGVDSAPFLQGLITNDINHLEKQPSMYTMFLNRQGRVLFDVVVFRENNHDYL 91 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADV 125 L+ D +SL+ + ++LR IE+ P++ + + + F F D R + Sbjct: 92 LDCDSRCINSLVKHMKMFRLREK--IEVNPVDNLAIVVTSDLNFFRGLFWHDPRTEMLGT 149 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 EK+ S Y R GI + D P FP ++ D L+G+S TKGCY Sbjct: 150 RAVIDANLVEKLVSKTTFYSLQRFELGIPEGIEDLPPGECFPLESNCDYLHGVSFTKGCY 209 Query: 186 IGQEVVSRIQHRNIIRKRPMII 207 IGQE+ +R H + RKR M + Sbjct: 210 IGQELTARTYHTGVTRKRLMPL 231 >gi|194903760|ref|XP_001980933.1| GG11944 [Drosophila erecta] gi|190652636|gb|EDV49891.1| GG11944 [Drosophila erecta] Length = 348 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58 + L N+ I+V G+ +PFLQ + T DV + + + L G++L ++ Sbjct: 39 TLEPLGNRELIRVHGQEVVPFLQGLATNDVARIRSPGGPASMYAHFLNKAGRLLYDTIMY 98 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + +T ++E DR L Y++R IE+ ++ +W + Sbjct: 99 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVP 156 Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEK---------IASDIKTYHELRINHGI 153 N +D R + + W K AS Y LR G+ Sbjct: 157 NPHPDLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGV 216 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211 + ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T Sbjct: 217 GEGCSELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 DL S ++G + K +A+ RI+KV + L + G R P W Sbjct: 277 DLGSSQDVTSVAGAKLGRVFGSAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEW 333 Query: 272 Y 272 + Sbjct: 334 W 334 >gi|195499172|ref|XP_002096836.1| GE25894 [Drosophila yakuba] gi|194182937|gb|EDW96548.1| GE25894 [Drosophila yakuba] Length = 348 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ + T DV + + + L G++L ++ Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILY 98 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + +T ++E DR L Y++R IE+ ++ +W + Sbjct: 99 RTNNPETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVP 156 Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEK---------IASDIKTYHELRINHGI 153 N +D R + + W K AS Y LR G+ Sbjct: 157 NPHPDLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGV 216 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211 + ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T Sbjct: 217 GEGCSELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 DL + ++G + K +A+ RI+KV + L + G R P W Sbjct: 277 DLGSNQDVTSVAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCFVERPEW 333 Query: 272 Y 272 + Sbjct: 334 W 334 >gi|24645123|ref|NP_649814.1| CG8043 [Drosophila melanogaster] gi|7299068|gb|AAF54268.1| CG8043 [Drosophila melanogaster] gi|28557661|gb|AAO45236.1| GH14121p [Drosophila melanogaster] gi|220946676|gb|ACL85881.1| CG8043-PA [synthetic construct] gi|220956316|gb|ACL90701.1| CG8043-PA [synthetic construct] Length = 348 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ + T DV + + + L G++L ++ Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 98 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + +T ++E DR L Y++R IE+ ++ W + Sbjct: 99 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVMFNLKDASEAVP 156 Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153 N D R + + W K +D T Y LR G+ Sbjct: 157 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATAASSDNSYQLLRYKQGV 216 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T + Sbjct: 217 GEGCSELTPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276 Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 S +T ++G + K +A+ RI+KV + L + G R P W Sbjct: 277 DVGSSQDVTSLAGAKLGRVFGFAHKHGIALLRIEKV---LNGRPELMIDGERCYVERPEW 333 Query: 272 Y 272 + Sbjct: 334 W 334 >gi|114569363|ref|YP_756043.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis maris MCS10] gi|114339825|gb|ABI65105.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis maris MCS10] Length = 273 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 14/265 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + V G A LQ +ITADV TL R A+LTPQGKIL+ F++ + DT Sbjct: 11 LPDRQIMSVSGPDARDLLQRLITADVQTLSAGTCRPGALLTPQGKILVDFMMF-ADGDTV 69 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L++ D L+ +L +KLR+ I + ++ W+ T S D R Sbjct: 70 WLDVPAGAADGLLKRLTMFKLRARAEIVLNT--NILALWS--TTPFPGSCEDPRL---GG 122 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 +HR G AS+ + + I GI D+ + +FP D +D G+ KGC+ Sbjct: 123 RVHRGLGEA---ASETRALDMIEIEAGIPAFGRDYGEADVFPTDVNLDAFGGVGWKKGCF 179 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 IGQEVVSR++ R IRKR + T + PP G+ ++ +G + G A+ +AR+D Sbjct: 180 IGQEVVSRMKRRGTIRKRSLPATFAAEAPPPGTAVMAGPTTVGAISSASGHHAVILARLD 239 Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270 ++ A G P Sbjct: 240 RLRAAEHY---CEADGQEANIVVPD 261 >gi|67459203|ref|YP_246827.1| glycine cleavage T-protein [Rickettsia felis URRWXCal2] gi|67004736|gb|AAY61662.1| Glycine cleavage T-protein [Rickettsia felis URRWXCal2] Length = 282 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 21/283 (7%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ ++T D+ Y + +L QG+ L F + + + Sbjct: 5 LSNREIIKIIGLDSVKFLQNLVTNDICKSSY---CYTYLLNNQGRYLFDFFVYVHKLEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +LI+ L FYK RS + II+ +V S + + + D R+S+ Sbjct: 62 YLDIDKSNKAALIEYLNFYKFRSKIQIIDCSEEYKIVYSHQKLDIDTLVTSRDPRYSMLG 121 Query: 125 VL----------LHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 R G + I + + Y E + N I+D D + P+ Sbjct: 122 FRSILSSRGLTTGSRNTGKQDWIPWSSHGMTIYLEDKYNFAIIDGVEDLITDKSIPNMYG 181 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGT 229 + LN IS KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG Sbjct: 182 AEELNAISFDKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGV 241 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + KA+A+ R +K + K +TV G+++ S WY Sbjct: 242 ICTSYRNKAIALIREEK--YLACKKSDITVKGIKINLSLAPWY 282 >gi|190570501|ref|YP_001974859.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019260|ref|ZP_03335067.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356773|emb|CAQ54134.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995369|gb|EEB56010.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 265 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 16/273 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L+N+S I + G FLQ +IT D+ L + A S +L PQGK L F + + Sbjct: 1 MGYIPLANRSLISLYGPDTRDFLQGVITNDINKLSSQQAIYSLLLNPQGKYLYDFFLIEH 60 Query: 61 EEDTFILEIDRSKRDSLIDK---LLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSS-- 114 ++ LE + + +I+K L Y ++R I GV+ S S Sbjct: 61 DK-YIYLECENAHLQQIIEKLDLLKTYLRVRIK-DISSLYKVGVLFDAKLAKCSSKSQVI 118 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 F D R + + + E + D Y ++RI + + D D + ++ FP L+D Sbjct: 119 FQDPRHKLLGMRIIHEDEIKEPVG-DFIQYEKVRIKNLVPDGAKDMVQNSSFPLQYLIDK 177 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV 233 +NGIS KGCYIGQEVV+R+ + R++ ++ G + LP G+ ++++ + E+G L Sbjct: 178 INGISFNKGCYIGQEVVNRMSRQEKFRRKLYLVEGKNALPNIGTKVISEHNEEVGELRSS 237 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 V LA+ K L V GV +K Sbjct: 238 VDNIGLALLNTGK------SHANLYVGGVSIKT 264 >gi|163734033|ref|ZP_02141474.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] gi|161392569|gb|EDQ16897.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] Length = 245 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 12/251 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I K D Sbjct: 1 MTKRRILRLTGTDVTEFLQGLITNDIKGVETGL-VYAAMLTPQGKYLADFFICK-SGDAI 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++++ S D L +L YKLR++V IE + + D R Sbjct: 59 LIDVAESHGDMLAQRLSMYKLRADVSIETTDL----HLHRGIGDPPAGALPDPRHP---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R + + LR+ H I + + P T F + + + G+ KGCY Sbjct: 112 LGWRCYADTPQTDDTTDW-TALRVAHQIPETGIELTPDT-FILEVGFERIAGVDFRKGCY 169 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK ++ T G+ I + +G L G KALA R D Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSITGP-AEPGAEITANGKAVGVLQSRAGDKALAYLRYD 228 Query: 246 KVDHAIKKGMA 256 + ++ G A Sbjct: 229 RATGPMQAGAA 239 >gi|225470311|ref|XP_002267571.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 407 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 90/354 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47 L ++S ++ G + FLQ ++T DV + +LTP Sbjct: 42 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 101 Query: 48 QGKILLYFLISKI----------------EEDT---FILEIDRSKRDSLIDKLLFYKLRS 88 QG+ L + + + D + ++D + D L+++ Y+LR+ Sbjct: 102 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNKYRLRA 161 Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115 +V+IE + + W + +S F Sbjct: 162 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHVNSHGWQWF 221 Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + +D K Y R+ G+ + +T+ L P + Sbjct: 222 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 281 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222 + LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++ Sbjct: 282 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSDVINA 341 Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 + GT+ + + L + R+ + A+K LT+ G V+V+A P W+ Sbjct: 342 VSGKKAGTVTTALECRGLGLLRL---NEALKGPSKLTIQGQEDVKVEAIRPEWW 392 >gi|302916931|ref|XP_003052276.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI 77-13-4] gi|256733215|gb|EEU46563.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI 77-13-4] Length = 389 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 120/338 (35%), Gaps = 67/338 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLISK 59 L+++ I + G A FLQ I+TA+V P K +A LT G++L + Sbjct: 44 LTPLTSRRLISIAGPDAAKFLQGIVTANVSAADGEPRKDGFYTAFLTATGRVLYDVFVYP 103 Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSN 112 EE F++E+D + L + YKLR+ + + + + V +W+ + Sbjct: 104 NHGASAEEPGFLIEVDADQAKMLAKHIKRYKLRAKLAVRLLGEDEASVWHAWDDSKGTNW 163 Query: 113 SSFI--------DERFSIADVLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161 S + D R R + +I S Y R HG+ + + Sbjct: 164 DSIVNQTKLTLQDPRAPGLGCRFVRLDQNTPEIDLERSTEDAYTIRRYLHGVPEGQDEIS 223 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-------------- 207 P + MD++NGI KGCY+GQE+ R +HR ++RKR + Sbjct: 224 REHALPQETNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCVIYEKEHAAPTELQ 283 Query: 208 TGTDDLPPSGSPILTD--------------DIEIGTLGVVVGKKALAIARI--------- 244 + P+ D G VG L + R+ Sbjct: 284 YHAEGAAPALESATADMIPRDTSIGRFEKRGRSAGKWLKGVGNVGLGLCRLEIMTDVVLP 343 Query: 245 -DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273 + A + GV+VKA P W + Sbjct: 344 GETASAAFNPEDEFVLEWGDEGSRTGVKVKAFVPDWLR 381 >gi|325091183|gb|EGC44493.1| aminomethyltransferase [Ajellomyces capsulatus H88] Length = 412 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 130/351 (37%), Gaps = 81/351 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58 L ++ I V GK + FLQ ++T ++LT K +A L G++L I Sbjct: 44 YTRLPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVPKSGFYAAFLNAPGRVLHDVFIY 103 Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107 + + +++E+D+++ +L+ + +KLRS + V WN+E Sbjct: 104 PVPPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEE 163 Query: 108 HT--------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHEL 147 + +D R +A + D TY+ Sbjct: 164 DAGQLTECDFQLDNGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLR 223 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI HG+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR + + Sbjct: 224 RILHGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILPV 283 Query: 208 TGTD-------------------DLPPSGSPIL----TDDIEIGTLGVVVGKKALAIARI 244 D LPP+G+ I G VG LA+ R+ Sbjct: 284 QLYDIDETMPKTETPYYSSESKLVLPPAGANIAKVSSKKGRSAGKFLSGVGNIGLALCRL 343 Query: 245 D----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 + + + G+ T ++VKA P W + Sbjct: 344 EMMTDIAFTDESSQYGPDQEFKISWEADPEAGVEKT-GELKVKALVPPWMR 393 >gi|84683617|ref|ZP_01011520.1| aminomethyltransferase [Maritimibacter alkaliphilus HTCC2654] gi|84668360|gb|EAQ14827.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2654] Length = 249 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 15/257 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ N++ ++ G + FL ++T +V +A+ TPQGK + F + Sbjct: 1 MTGETHENRTIFRITGADRVKFLDNLVTNNVK---PGGIAYAALQTPQGKYIADFFMVDT 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D ++++D +L +L YKLR++V IE + + +F D R Sbjct: 58 G-DALLIDVDSDLAQTLGQRLTMYKLRADVQIEPTEL----FALRGRKDMPEGAFPDPRH 112 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + L R + A + LR+ + + P T F +A D LNG+ Sbjct: 113 A---ALGWRLYSDTPGDA-PTTDWEALRVELNVPASGAELTPDT-FILEAGFDRLNGVDF 167 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD-IEIGTLGVVVGKKAL 239 KGC++GQEV +R++H+ +RK + + + G+ I TDD G L G +A+ Sbjct: 168 KKGCFVGQEVTARMKHKTELRKGFVTVAVDGE-AEPGTEITTDDGKPAGMLHTRAGDRAI 226 Query: 240 AIARIDKVDHAIKKGMA 256 A R D+ + + G A Sbjct: 227 AYLRFDRAERPMTAGDA 243 >gi|195330640|ref|XP_002032011.1| GM23750 [Drosophila sechellia] gi|194120954|gb|EDW42997.1| GM23750 [Drosophila sechellia] Length = 347 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ + T DV + + + L G++L ++ Sbjct: 38 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 97 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + +T ++E DR L Y++R IE+ ++ W + Sbjct: 98 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVP 155 Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153 N D R + + W K +D T Y LR G+ Sbjct: 156 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASSDNSYQLLRYKQGV 215 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T + Sbjct: 216 GEGCSELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 275 Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 S +T ++G + K +A+ RI+KV + L + G R P W Sbjct: 276 DVGSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEW 332 Query: 272 Y 272 + Sbjct: 333 W 333 >gi|85084479|ref|XP_957315.1| hypothetical protein NCU06424 [Neurospora crassa OR74A] gi|74628446|sp|Q7RYZ1|CAF17_NEUCR RecName: Full=Putative transferase caf-17, mitochondrial; Flags: Precursor gi|28918405|gb|EAA28079.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 439 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 84/355 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE- 61 L+++ I V G A FLQ +IT ++ + LT QG+++ +I + Sbjct: 56 LTKLTSRRLISVSGPDASKFLQGVITNNINAPHNANGFYTGFLTAQGRVVHDVIIYPDDL 115 Query: 62 -----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQ-------- 106 + +F++E+D + +L + YKLRS +++ + SWN Sbjct: 116 GPEPGKQSFLIEVDADEAATLHKHIKRYKLRSKFNLKLLDPEERALYHSWNDVDQAGPWT 175 Query: 107 ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-----IKTYHELRINHGIVD 155 ++ + + D R + + +D +YH R GI + Sbjct: 176 KLIDEVQNAGNARAVPDPRVPAFGSRVVVNQTSSSSPLTDGDLTPESSYHLRRFLLGIPE 235 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDL 213 ++ + T P ++ MD++NGI KGCY+GQE+ R +HR ++RKR + + Sbjct: 236 GQSEIISGTALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYYEGAA 295 Query: 214 P------------------------------PSGSPILTDDIEI----GTLGVVVGKKAL 239 P P G+ I D + G +G L Sbjct: 296 PEIPADGPGQLEALEKLLKPEVEQGVKAEMIPQGASIDKVDKKSRSAPGKWLRGIGNVGL 355 Query: 240 AIARIDKVDHAI---------------------KKGMALTVHGVRVKASFPHWYK 273 A+ R++ + + ++G + V+VKA P W K Sbjct: 356 ALCRLEVMTDTVLPGETPGTYSPEQDFVVSLGGEEGSEVEAKKVKVKAFVPFWLK 410 >gi|71649960|ref|XP_813688.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878596|gb|EAN91837.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 319 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 34/304 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60 LS++S I+V G +A FLQ + T D+ L + L G+++ + + Sbjct: 5 CLLSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------Q 106 E ++++ R D+L D LL ++R + IE VV++ + + Sbjct: 65 DGGEVCILVDVHRDVVDTLHDHLLDMRMRRRLQIENAGKEFVVVAGSSYGNGGIYEEEEE 124 Query: 107 EHTFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTD 159 E T SS F+D R L ++ + + Y GI + Sbjct: 125 EKTPPLSSECETFMDPRSFAFPAPLQKSIFPLSKAPSVTDPVARYETFLYTAGIGEGPDV 184 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GT 210 F P+ FP + D L G+S KGCY+GQE+ R + RKR + + G Sbjct: 185 FKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGGG 244 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFP 269 G +L D+ ++G L V G L + R+ VD A + L + V V + P Sbjct: 245 RRSVEKGEALLIDERKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIP 304 Query: 270 HWYK 273 W++ Sbjct: 305 GWWE 308 >gi|225561737|gb|EEH10017.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 412 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 130/351 (37%), Gaps = 81/351 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58 L ++ I V GK + FLQ ++T ++LT K +A L G++L I Sbjct: 44 YTRLPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVPKSGFYAAFLNAPGRVLHDVFIY 103 Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107 + + +++E+D+++ +L+ + +KLRS + V WN+E Sbjct: 104 PVPPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEE 163 Query: 108 HT--------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHEL 147 + +D R +A + D TY+ Sbjct: 164 DAGQLTECDFQLDNGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLR 223 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI +G+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR + + Sbjct: 224 RILYGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILPV 283 Query: 208 TGTD-------------------DLPPSGSPIL----TDDIEIGTLGVVVGKKALAIARI 244 D LPP+G+ I G VG LA+ R+ Sbjct: 284 QLYDIDETMPKTETPYYSSESKLVLPPAGANIAKVSSKKGRSAGKFLSGVGNIGLALCRL 343 Query: 245 D----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 + + + G+ T ++VKA P W + Sbjct: 344 EMMTDIAFTDESSQYGPDQEFKISWEADPEAGVEKT-GELKVKALVPPWMR 393 >gi|71664696|ref|XP_819326.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884622|gb|EAN97475.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 320 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 35/305 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60 LS++S I+V G +A FLQ + T D+ L + L G+++ + + Sbjct: 5 CLLSSRSLIRVSGAAAHDFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------- 105 + ++++ R D+L D LL ++R + I+ VV++ + Sbjct: 65 HGGDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVAASSYGNGGIYEAEEE 124 Query: 106 QEHTFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNT 158 +E T SS F+D R LH++ + + Y GI + Sbjct: 125 EEKTPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPD 184 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD------- 211 F P+ FP + D L G+S KGCY+GQE+ R + RKR + + Sbjct: 185 VFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGS 244 Query: 212 --DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASF 268 G +L D ++G L V G L + R+ VD A + L + V V + Sbjct: 245 GRRSVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLEDDVPVVITI 304 Query: 269 PHWYK 273 P W++ Sbjct: 305 PGWWE 309 >gi|195572493|ref|XP_002104230.1| GD18562 [Drosophila simulans] gi|194200157|gb|EDX13733.1| GD18562 [Drosophila simulans] Length = 347 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ + T DV + + + L G++L ++ Sbjct: 38 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 97 Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111 + +T ++E DR L Y++R IE+ ++ W + Sbjct: 98 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVP 155 Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153 N D R + + W K +D T Y LR G+ Sbjct: 156 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASPDNSYQLLRYKQGV 215 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T + Sbjct: 216 GEGCSELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 275 Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 S +T ++G + K +A+ RI+KV + L + G R P W Sbjct: 276 DVGSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVDRPEW 332 Query: 272 Y 272 + Sbjct: 333 W 333 >gi|296082848|emb|CBI22149.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 90/354 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47 L ++S ++ G + FLQ ++T DV + +LTP Sbjct: 5 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 64 Query: 48 QGKILLYFLISKI----------------EEDT---FILEIDRSKRDSLIDKLLFYKLRS 88 QG+ L + + + D + ++D + D L+++ Y+LR+ Sbjct: 65 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNKYRLRA 124 Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115 +V+IE + + W + +S F Sbjct: 125 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHGNSHGWQWF 184 Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + +D K Y R+ G+ + +T+ L P + Sbjct: 185 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 244 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222 + LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++ Sbjct: 245 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSDVINA 304 Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 + GT+ + + L + R+ + A+K LT+ G V+V+A P W+ Sbjct: 305 VSGKKAGTVTTALECRGLGLLRL---NEALKGPSKLTIQGQEDVKVEAIRPEWW 355 >gi|83594272|ref|YP_428024.1| glycine cleavage T protein (aminomethyl transferase) [Rhodospirillum rubrum ATCC 11170] gi|83577186|gb|ABC23737.1| Glycine cleavage T protein (aminomethyl transferase) [Rhodospirillum rubrum ATCC 11170] Length = 312 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 37/299 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ + + G + FLQ +++ DV + A +A LTPQGK L F + + E Sbjct: 14 LCPRPDRGVLGLSGADRVSFLQGLVSNDVTRAGPEQALWAAFLTPQGKYLHDFFVVSVGE 73 Query: 63 DT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------ 113 +L + ++ + L +L Y+LRS V +++ V + + S Sbjct: 74 GESARLLLVGEAARLEDLRARLSRYRLRSKVTLDLAGGWTVAVIPGRNAAASLGLPDRPG 133 Query: 114 ----------SFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 +F+D R S A V LL + + R+ G+ + + D Sbjct: 134 AMRALDGGGLAFVDPRLSAAGVHLLLPEAAAKPPLPLGEESLWQAHRLALGLPEGSDDLE 193 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI- 220 P + + L G+ KGCY+GQE+ +R ++R +++KR + + LP GS + Sbjct: 194 PEKALLLENGFEELGGVDFKKGCYMGQELTARTKYRGLVKKRLIPVAIDGPLPAPGSALR 253 Query: 221 LTDDIEIGTLGVVVGKKALAIARID------KVDHAIKKGMALTV--HGVRVKASFPHW 271 + ++ G + + R D + + G + G + S P W Sbjct: 254 TGEGLDAGEMRS-------GLVRADGQTLGLALLRLARLGGPILAEDGGATLTPSIPSW 305 >gi|84500029|ref|ZP_00998295.1| aminomethyl transferase family protein [Oceanicola batsensis HTCC2597] gi|84391963|gb|EAQ04231.1| aminomethyl transferase family protein [Oceanicola batsensis HTCC2597] Length = 251 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 13/250 (5%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + I+V G FLQ ++T D+ L +A+LTPQGK++ FL+ + + + + Sbjct: 5 NERRVIRVGGSDTFDFLQNLVTNDLDRLSEGP-VYAALLTPQGKLIADFLVLQ-DGEALL 62 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 +++ + D L+ +L Y+LR++V IE + + D R L Sbjct: 63 VDVAEAFADPLVQRLNMYRLRADVRIEPTG----IKVRRGTGAAPEGAVADPRHPS---L 115 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 R +G ++ D + +R+ I + + P T +A D LNG+ KGCY+ Sbjct: 116 GWRLYGESD--GDDGTDFAAIRVAGVIPESGIELGPETYI-LEAGFDRLNGVDFRKGCYV 172 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 GQEV +R++H+ +RK + + P +G+ I + ++G L +A+A AR D+ Sbjct: 173 GQEVTARMKHKTELRKGLIRVDVEGAAP-AGTEIEREGKKVGILYTQSDGQAIAYARFDR 231 Query: 247 VDHAIKKGMA 256 + + G A Sbjct: 232 LAPGMTAGEA 241 >gi|115387399|ref|XP_001211205.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195289|gb|EAU36989.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1258 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 129/355 (36%), Gaps = 84/355 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+++ I V G + FLQ +IT D + +A L G+IL Sbjct: 865 YARLTHRGLISVTGVDSTSFLQGLITQNMLVTNDPNRSTRRTGSYTAFLNSHGRILNDAF 924 Query: 57 ISKI-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE-- 107 + + E ++++EID+++ +L+ L +KLR+ + + + +W Sbjct: 925 LYPLPSADAGESSWLIEIDKNEVPALMKHLKKHKLRAKLKLRALDDGERTIWAAWKDHME 984 Query: 108 ----------------HTFSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKT 143 + ID R L G NE +++ Sbjct: 985 PRWAAYNLEAAAGPFSAAPEIAGCIDTRAPGFGSRLVTPGAEDLRTHLGENEVAGDEVEL 1044 Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 Y R+ HGI + ++ + + P ++ MD+++GI KGCY+GQE+ R H ++R Sbjct: 1045 GGYTVRRMMHGIAEGQSEIIRESALPLESNMDMMHGIDFRKGCYVGQELTIRTHHTGVVR 1104 Query: 202 KRPMIITGTD--------------------DLPPSGSPILTD----DIEIGTLGVVVGKK 237 KR + + D +PP+G+ I G VG Sbjct: 1105 KRILPVQLYDGDLGELASAELPTYDPSAALGVPPAGTNIAKAGARRGRSAGKFLGGVGNI 1164 Query: 238 ALAIARID------KVDHAIK-------------KGMALTVHGVRVKASFPHWYK 273 LA+ R++ D A + + V++KA P W + Sbjct: 1165 GLALCRLEMMTDITLTDEATQYNPEQEFKVSWTGEESPAGAGEVKIKAMVPPWTR 1219 >gi|89055962|ref|YP_511413.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia sp. CCS1] gi|88865511|gb|ABD56388.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia sp. CCS1] Length = 247 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 15/249 (6%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +++ +++ G A FLQ ++T D + SA+LTPQGK L F + +D +L Sbjct: 8 DRTILRLSGADAHGFLQGLVTRD----AGEGLTYSALLTPQGKYLADFFLLDRGDD-ILL 62 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 ++ ++ +L Y+LR++V IE + +F D R Sbjct: 63 DVKSDIARAVAQRLGMYRLRADVTIEEADLPVA----RGLGDMPAGAFADPRDPSLGWRA 118 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 + G + + + LR+ + + + P+ + +A D L G+ KGCY+G Sbjct: 119 YGVAGGDP-----VTDWTALRVAACVPETGVELTPNDTYILEAGFDRLCGVDHKKGCYLG 173 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 QEV +R++H+ ++K + ++ P G+ I+ + GTL G + +A R D+ Sbjct: 174 QEVTARMKHKTELKKGFVTVSVDGTAP-VGTAIMAGEKPAGTLYTQAGGQGIAYLRFDRA 232 Query: 248 DHAIKKGMA 256 + A Sbjct: 233 TGPMTAAEA 241 >gi|310816646|ref|YP_003964610.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare Y25] gi|308755381|gb|ADO43310.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare Y25] Length = 246 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 13/248 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G +PFLQ ++T DV +A+LTPQGK + F + + +L+ Sbjct: 5 RKVFAITGTDRLPFLQNLVTNDVKR-AEGALVYTALLTPQGKFIADFFL-HEDGSRLLLD 62 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 +D +LI +L Y+LR++V I + + + D R L Sbjct: 63 VDAGAAAALIPRLSMYRLRADVQIAETDL----VVSRGTGDAPAGALADPRDPR---LGW 115 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 R +G + SD + LR++ + + + + + + L+G+ KGCY+GQ Sbjct: 116 RLYGAAD--VSDATDWDALRVDLLVPEMGAELT-GESYILENGFERLHGVDFRKGCYVGQ 172 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + D P G+ I+ D E G L G +A+A R D+ Sbjct: 173 EVTARMKHKTELRKGLARVQVVGDAAP-GTVIMAGDREAGQLLTRAGDQAIAYLRFDRAG 231 Query: 249 HAIKKGMA 256 + G A Sbjct: 232 GEMTAGSA 239 >gi|115955869|ref|XP_001192913.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 291 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 26/269 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57 ++ L+ +S + V G+ A LQ ++T DV L + S L QG++L + Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79 Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110 + D +++LE D + L L Y++R V I + V ++ T Sbjct: 80 YQWSNDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139 Query: 111 SNSS----------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNT 158 S F D + + + G + + Y R G+ + Sbjct: 140 PPSPGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVN 199 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPP 215 + P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I P Sbjct: 200 ELPPGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIP 259 Query: 216 SGSPI-LTDDIEIGTLGVVVGKKALAIAR 243 +G+ I + +G + LA+ R Sbjct: 260 AGTSIKTAEGKNVGKFRCHLHHNGLALLR 288 >gi|242022699|ref|XP_002431776.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517101|gb|EEB19038.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 328 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 41/305 (13%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE-E 62 L+ +S +++ GK A +LQ +IT D+ L + + L +G++L +I E Sbjct: 16 RLNERSLLRLSGKDANLYLQGLITNDMKHLESGASSMYTMFLNSKGRVLYDSIIYNTNIE 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116 +TF +E D + L D L+ +K+R V I++ V + + N + Sbjct: 76 NTFYVECDSNASLYLKDHLMHFKVRRKVNIDLLSDEFSVWALAFKDYIINPKDVYNYKPV 135 Query: 117 ---------------DERFSIADV---------LLHRTWGHNEKIASDIKTYHELRINHG 152 D R + L++ + + Y LR N G Sbjct: 136 LNELKKNLPQLIITNDPRLPSMGLRVLTPKDYNLVNEIKKIADVNVQEENFYKFLRYNLG 195 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + + FP + D L+GIS KGCY+GQE+ +R H +IRKR M + ++ Sbjct: 196 IGEGLNELPLEKCFPMEINGDYLHGISFHKGCYVGQELTARTYHTGVIRKRIMPLKFNEE 255 Query: 213 LP--PSGSPILTDD---IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + G PI + IG L V L + RI+ A+K +T + Sbjct: 256 VSITQPGIPIFSVSQLTKAIGKLFGVEQTSGLGLLRIE---EALKANELITFEK-KCNTH 311 Query: 268 FPHWY 272 P W+ Sbjct: 312 RPFWW 316 >gi|156058962|ref|XP_001595404.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980] gi|154701280|gb|EDO01019.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980 UF-70] Length = 411 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 125/342 (36%), Gaps = 72/342 (21%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---- 59 LS + I + G + +LQ +IT D+ K SA L QG++L I + Sbjct: 69 ARLSTRRLISLRGPDSTKYLQGVITNDIYKEGNKNGFYSAFLNAQGRVLNDVWIYRDIYA 128 Query: 60 -------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING------------- 99 E D +++E+D + + L + Y++R+ ++I Sbjct: 129 DLKGDKTTEGDNWLIEVDAKQVEVLAKHIKRYRMRAKFDVDIVDEEEKKIYSLWGTKVGV 188 Query: 100 -VVLSWNQEHTFSNSSFI--DERFSIADVL--------LHRTWGHNEKIASDIKTYHELR 148 V+ + ++ + + D R +H E Y R Sbjct: 189 RVIDAQERDREKAQQGIVTSDTRAPGMGNRVIVNKGWHMHMDIQDAEVQMHGENVYRARR 248 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PM 205 G+ + + L + P ++ +D++ GI TKGCY+GQE+ R H +IRKR M Sbjct: 249 YLIGVPEGQDEILRESALPQESNIDVMGGIDYTKGCYVGQELTIRTHHTGVIRKRIVPMM 308 Query: 206 IITGTDDLPPSGSPILTDD------------------IEIGTLGVVVGKKALAIARIDK- 246 ++ +D+P G +G VG L +AR+D+ Sbjct: 309 LVPDGEDMPGLGELKYKGGHLASWLNGGENIKKVGGKRPVGKWLSGVGNLGLGLARLDEM 368 Query: 247 ------------VDHAIKKGMALT---VHGVRVKASFPHWYK 273 VD + +G V +RV+A P W + Sbjct: 369 GKWMVEEKEAGGVDEFVAEGKGEKEGEVRNIRVRAFPPAWIE 410 >gi|261189571|ref|XP_002621196.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081] gi|239591432|gb|EEQ74013.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081] gi|239613037|gb|EEQ90024.1| aminomethyl transferase [Ajellomyces dermatitidis ER-3] gi|327356927|gb|EGE85784.1| aminomethyl transferase [Ajellomyces dermatitidis ATCC 18188] Length = 437 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 80/350 (22%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58 L ++ I + GK + FLQ ++T ++LT + +A L G++L I Sbjct: 47 YARLPTRALITLTGKDSTSFLQGLVTQNLLTPQNTPVPQSGFYAAFLNAPGRVLHDVFIY 106 Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107 + + +++E+D+++ +L+ + +KLR+ + V WN+E Sbjct: 107 PVPPNDSYNGTSDLAYLIEVDKNEVTNLMKHMRKHKLRAKLAFRAMDEGELNVFSLWNEE 166 Query: 108 HT-------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHELR 148 + +D R +A + D TY+ R Sbjct: 167 DAGIMEYDFQLENGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLRR 226 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I HG+ + + + + P + MD++ I KGCY GQE+ R HR ++RKR + + Sbjct: 227 ILHGVPEGQGEIIRESALPMECNMDIMGAIDFHKGCYTGQELTIRTHHRGVVRKRILPVQ 286 Query: 209 GTDD-------------------LPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245 D LPP+GS I G VG LA+ R++ Sbjct: 287 LYDMDEPIPETDVPNYSSESKLVLPPAGSNIAKVSSRKGRSAGKFLSGVGNIGLALCRLE 346 Query: 246 ----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 + + G+ ++VKA P W + Sbjct: 347 MMTDIVFTEESSQYNPDQEFKISWEADAEAGVE-KAGELKVKALVPPWTR 395 >gi|268564264|ref|XP_002639061.1| Hypothetical protein CBG14872 [Caenorhabditis briggsae] gi|187027514|emb|CAP33284.1| hypothetical protein CBG_14872 [Caenorhabditis briggsae AF16] Length = 281 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 13/270 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + Sbjct: 6 LIKLPHRVILKLHGADTNAFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGT 65 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D LE ++ + L+ ++L Y+LR V I + + Q T +S + D RFS Sbjct: 66 DDVFLECSKANQSVLVKEILKYRLRKRVEISETTDQ---VFFEQISTDKSSEYRDPRFSN 122 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + +E ++ + + Y LR ++GI + + + + P A DLLN +SL K Sbjct: 123 FGARVFGNPSSSE-VSENREAYENLRRSNGIAEGAVEL--ADLLPFQANGDLLNMVSLDK 179 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241 GCYIGQE+ +R H +IR+R + + G+ IL + ++G + + L I Sbjct: 180 GCYIGQELTARTAHTGVIRRRILPFECEGQV-KIGADILDEKKNKVGKIISSDSTRCLGI 238 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ++ A K L+ V + A P W Sbjct: 239 LQL-----ASFKSPKLSADDVALTARQPEW 263 >gi|40063600|gb|AAR38389.1| glycine cleavage system T protein [uncultured marine bacterium 582] Length = 252 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 15/256 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M ++ ++ G FLQ ++T DV + SAILTPQGK + F + + Sbjct: 1 MPYTR--DRHIFEIRGHDRAGFLQGLVTNDVSQ-TPQALTYSAILTPQGKFITDFFLFQ- 56 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +E +++ S +L +L YKLR+ V I+ P+ + + + D R Sbjct: 57 DEKAIYMDVADSAAPALSTRLNMYKLRAEVTIDDSPLK----VFCGTGSAPQGAKSDPRD 112 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R +G E+ D + LR+ I + + + + L+G+ Sbjct: 113 RS---LGWRLYG--ERSGDDGSDWTALRVAACIPAVTIELTADSYI-LENGFERLHGVDF 166 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+ +R++H+ +RK + P +G+ I+ D +G L G LA Sbjct: 167 KKGCYVGQEITARMKHKATLRKGLAQVRVDGKAP-TGTDIVADGKNVGVLYSQSGGLGLA 225 Query: 241 IARIDKVDHAIKKGMA 256 R D+ ++ A Sbjct: 226 YLRFDRATDKMQAASA 241 >gi|115715690|ref|XP_001188789.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 269 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 26/265 (9%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLISKIE 61 L+ +S + V G+ A LQ ++T DV L + S L QG++L + + Sbjct: 2 RLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWS 61 Query: 62 ED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS 114 D +++LE D + L L Y++R V I + V ++ T S Sbjct: 62 NDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTPPPSP 121 Query: 115 ----------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLP 162 F D + + + G + + Y R G+ + + P Sbjct: 122 GSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELPP 181 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSP 219 P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I P+G+ Sbjct: 182 GDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGTS 241 Query: 220 I-LTDDIEIGTLGVVVGKKALAIAR 243 I + +G + LA+ R Sbjct: 242 IKTAEGKNVGKFRCHLHHNGLALLR 266 >gi|58584606|ref|YP_198179.1| aminomethyltransferase related to GcvT [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418922|gb|AAW70937.1| Predicted aminomethyltransferase related to GcvT [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 265 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 16/273 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L ++ I + G FLQ +IT D+ L + A S +L+PQGK L F + + Sbjct: 1 MGYIPLPSRGVIVLYGPDTRDFLQGVITNDINKLNSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114 + +LE + +I+KL K LR + +I + V + ++ + T ++ Sbjct: 61 GK-CILLECENMYLQQIIEKLDLLKTYLRVKIK-DISALYKVGILFDTKSTECSNESQVI 118 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 F D R + ++ + E + D Y +RI + + D D + + FP L+D Sbjct: 119 FQDPRHKLLEMRIIHKNEIKE-LVGDFAQYERVRIQNLVPDGAKDMVQNLSFPLQYLIDK 177 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233 +NGIS KGCYIGQEVVSR+ + I RK+ ++ G + LP G+ + ++ E+G L Sbjct: 178 INGISFNKGCYIGQEVVSRMSRQEIFRKKLYLVEGDNALPNIGTKVTNENNEEVGELRSS 237 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + LA+ K L G+ V Sbjct: 238 IDNIGLALLNTGK------SHTNLYADGIGVFV 264 >gi|242777590|ref|XP_002479065.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC 10500] gi|218722684|gb|EED22102.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC 10500] Length = 446 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 131/367 (35%), Gaps = 99/367 (26%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFLISK 59 L+N++ I + G + FLQ +IT ++ + P + SA L QG++L I Sbjct: 40 LTNRALIAITGVDSTSFLQGMITQNMLMGKEPVRAPRRTGSYSAFLNSQGRVLHDVFIYP 99 Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 I +E +++E+D+++ +L+ L +KLR+ + + + +WN Sbjct: 100 ITKGNLGHSNESPDEAAWLIEVDKAEVSNLMKHLKKHKLRAKLTLRALEDGEQSIWAAWN 159 Query: 106 QEHTFSNSSF----------IDERFSIADVLLHRTWG---------------------HN 134 E T + + + + + R G Sbjct: 160 NESTEPRWAAYNLESDFPSQLADNSPVVGCIDTRAPGFGTRYITPGPDDLQIHLPAETKL 219 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + + D++TY R +G+ + + + + P + MD+ GI KGCY+GQE+ R Sbjct: 220 QGLQVDLETYKLRRYLYGVAEGQGEIIRESSLPMECNMDVARGIDFRKGCYVGQELTIRT 279 Query: 195 QHRNIIRKRPMIITG----------------------TDDLPPSGSPI----LTDDIEIG 228 H ++RKR + + PP+G+ I G Sbjct: 280 HHTGVVRKRILPVQLYGVDEDTTTSSSSSAPIYDLETQTTQPPTGANISRVGTRKGRSAG 339 Query: 229 TLGVVVGKKALAIARID----------------------KVDHAIKKGMALTVHGVRVKA 266 VG LA+ R++ D G+ V++KA Sbjct: 340 KFISGVGNVGLALCRLEMMTDISLTGESSQYNPSQEFQVSWDAGSAAGLVSQQGAVKIKA 399 Query: 267 SFPHWYK 273 P W + Sbjct: 400 IVPSWLR 406 >gi|296809796|ref|XP_002845236.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480] gi|238842624|gb|EEQ32286.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480] Length = 408 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 56/297 (18%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK- 59 +L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 HLTNRSLISLSGIDSTKFLQGLITRNLSVPNNSPPTTSPFYAAFLNSQGRILNDVFIYPQ 107 Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWN------- 105 +E +++E+D+ SL+ +KLRS + V W+ Sbjct: 108 TAASSPDEMEYLIEVDKEHSASLLKHFKRHKLRSKLKFRALDEGERSVWALWDDGNISTY 167 Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGI 153 + SN++ I A + +R +K+ + ++TY RI G+ Sbjct: 168 HENEAISNNNAIACPDKRAPGMGYRLIASGDKLQTQIMEALPGDETSLQTYTLRRILQGV 227 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211 + T+ + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 228 AEGQTEMARESALPMDSNVDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYGLG 287 Query: 212 -----------------DLPPSGSPI------LTDDIEIGTLGVVVGKKALAIARID 245 LP +G+ G +G LA+ R++ Sbjct: 288 QSPPTSDSPVYEPDTNIILPSAGTEANISKVGTVKGRSAGKFLTGIGNVGLAVCRLE 344 >gi|71019851|ref|XP_760156.1| hypothetical protein UM04009.1 [Ustilago maydis 521] gi|74701127|sp|Q4P7A4|CAF17_USTMA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|46099873|gb|EAK85106.1| hypothetical protein UM04009.1 [Ustilago maydis 521] Length = 403 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 123/341 (36%), Gaps = 70/341 (20%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-------YKIARGSAILTPQGKILLY 54 + ++ ++V G+ + LQ +++ DV L + + PQG++L Sbjct: 51 KLAKVPHRGVVQVSGRDTVKLLQGLVSNDVKALDSTTLTHQPPNMVYAGFMNPQGRMLAD 110 Query: 55 FLISKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW---- 104 I + + ++L+ID SL+ + +KLRS V + ++ VV +W Sbjct: 111 VFIHRQPANQDGSPRWLLDIDSRTLPSLVAFIKKFKLRSKVKLTDLSTDYHVVQAWDSNS 170 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTD 159 T + ID R + +A+ T Y RI +G+ + D Sbjct: 171 QAPPTIAEKLSIDPRSPSIGYRGVLSAAEILDVAAAASTVDGLEYTLHRITNGVAEGALD 230 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGS 218 F ++ P + +D ++G+ KGCY+GQE+ +R H ++RKR + ++ PP S Sbjct: 231 FPQASSLPLENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKRIVPLSFYLAGTPPPAS 290 Query: 219 ----------------------PILTD---------DIEIGTLGVVVGKKALAIARIDKV 247 PI T G V LA R+++V Sbjct: 291 IHDVDPAFPHQLPTHLAEIRSKPISTASEAATKPARGKAAGKFTSGVYNVGLACLRLEQV 350 Query: 248 DHAIKKGMA-------------LTVHGVR---VKASFPHWY 272 A L+ G + P W+ Sbjct: 351 RRWADSSSADPNSKHDALEFSVLSADGETTLLARPWIPSWW 391 >gi|221116643|ref|XP_002154366.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 560 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 11/263 (4%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 V GK LQ +IT DV L + S +L QG+IL + K E +++E + Sbjct: 298 VHGKDCKKLLQGMITNDVSLLDNNLVNCIYSMVLNVQGRILYDLFLHKHEH-GYLMECNS 356 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 +D L+ L YKLRS V E + V +S++ + +D R T Sbjct: 357 CFKDELVSYLNRYKLRSKVFFENRDDLNVYVSFS--SDMFDHFVVDPRLPKLGYRNLSTK 414 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 + DI Y LR GI + P + + LLNG+S TKGCYIGQE+V Sbjct: 415 KIVKNDFGDISCYTNLRYQLGISEGVEVI---NGIPLEHNLALLNGVSFTKGCYIGQELV 471 Query: 192 SRIQHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249 +R H ++RKR + + + + L + + D ++G L + GK A+ + R+ ++ Sbjct: 472 ARAHHTGVVRKRVVPLLLSREHCLLDGNTVCMEGDFQVGKLLGISGKNAIGLLRLKEIFD 531 Query: 250 AIKKGMALTVHGVRVKASFPHWY 272 K + + + VKA P W+ Sbjct: 532 DKNK-LHIKDSDISVKAFKPDWW 553 >gi|157825884|ref|YP_001493604.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford] gi|157799842|gb|ABV75096.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford] Length = 308 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 47/309 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT D+ + +LT QG+ L F + + Sbjct: 5 LSNREIIKIIGLDSVKFLQNLITNDIKK---SQYCYTYLLTNQGRYLFDFFVYVRNLEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +LI+ L FYKLRS + II+ V+ S + + + D R+S+ Sbjct: 62 YLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLG 121 Query: 125 VL------------------LHRTWGH---------------------NEKIASDIKTYH 145 + + W + + + Y Sbjct: 122 FRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLYL 181 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++ Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241 Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 IT +DL IL +IG + KA+ + R +K + K +TV G++ Sbjct: 242 KITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEK--YFACKEADITVKGIK 299 Query: 264 VKASFPHWY 272 + S WY Sbjct: 300 INLSLAPWY 308 >gi|157803675|ref|YP_001492224.1| glycine cleavage T-protein [Rickettsia canadensis str. McKiel] gi|157784938|gb|ABV73439.1| Glycine cleavage T-protein [Rickettsia canadensis str. McKiel] Length = 276 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 15/277 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ IK+ G ++ FLQ ++T D+ + +L +GK L F + + Sbjct: 5 LSDREVIKIIGLDSVKFLQNLVTNDIKK---SKYCYTYLLNNKGKYLFDFFVYIHNFEEL 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +LID L FYK RS + II+ V+ S + + + D R++ Sbjct: 62 YLDIDKSNKATLIDHLNFYKFRSKIQIIDCHDKYKVIYSHQKLDIDTLVTSRDPRYTKLG 121 Query: 125 VL--LHRTWGHN-EKIASDIKT----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 ++RT + + + Y E + N I+D D + P + LNG Sbjct: 122 FRSIVNRTLKDTLDPLCHSREDKNPIYLEDKYNFAIIDGVEDLSFNKSIPILYGGEELNG 181 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVG 235 IS KGCY+GQEV+SR +++ IIR++ + +DL IL D+ IG + Sbjct: 182 ISYYKGCYVGQEVISRAKYQGIIRRKIYKVIADEDLSSLVKDEEILADNDTIGIICSSYH 241 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 KA+A+ R++K + K +++V G+ ++ S WY Sbjct: 242 NKAIALIRVEK--YLAVKESSISVKGISIELSLAPWY 276 >gi|289620040|emb|CBI53484.1| unnamed protein product [Sordaria macrospora] Length = 446 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 84/355 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE- 61 L+++ I V G A FLQ +IT ++ + LT QG+++ +I E Sbjct: 63 LTKLTSRRLISVSGPDASKFLQGVITNNIDAPHNANGFYTGFLTAQGRVVHDVIIYPDEL 122 Query: 62 -----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQ-------- 106 + +F++E+D ++ +L + YKLRS +++ + +WN Sbjct: 123 GPEPGKRSFLIEVDANEAMTLHKHIKRYKLRSKFNLKLLDPEERALYHAWNDVDQSGPWS 182 Query: 107 ------EHTFSNSSFIDERFSIAD--VLLHRTWGHNEKIASDI---KTYHELRINHGIVD 155 + + + D R V++++T + +D+ +YH R GI + Sbjct: 183 KLIDEIQKDGNPRTVPDPRVPAFGSRVIVNQTSSSSSLTDNDLTPESSYHLRRFLLGIPE 242 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDL 213 ++ + + P ++ MD++NGI KGCY+GQE+ R +HR ++RKR + + Sbjct: 243 GQSEIISGSALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYSEGAA 302 Query: 214 P------------------------------PSGSPILTDDIEI----GTLGVVVGKKAL 239 P P G+ I D + G +G L Sbjct: 303 PEIPADGPGQLEALEKLLKPEVDEGVKAEMIPQGASIDKVDKKSRSAPGKWLRGIGNVGL 362 Query: 240 AIARIDKVDHAI---------------------KKGMALTVHGVRVKASFPHWYK 273 A+ R++ + + +G + ++VKA P W K Sbjct: 363 ALCRLEVMTDTVLPGETPGMYSPEQDFVVSLGGGEGSEVEAKKLKVKAFVPFWLK 417 >gi|302497401|ref|XP_003010701.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371] gi|291174244|gb|EFE30061.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371] Length = 409 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 129/347 (37%), Gaps = 78/347 (22%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK- 59 +L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107 Query: 60 ------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103 E +++E+D+ + L+ +KLRS + +G + Sbjct: 108 ETASSPTGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152 W++ F ++ I A + +R K+ S I+ Y R+ G Sbjct: 168 WHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRRMLQG 227 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + + Sbjct: 228 VGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYES 287 Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247 PPSG + G +G LA+ R++ + Sbjct: 288 TKTLPTSDMPVYDPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNIGLAVCRLEIM 347 Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273 + + G A +VKA P W K Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394 >gi|71985951|ref|NP_492346.2| hypothetical protein F39H2.3 [Caenorhabditis elegans] gi|54110900|emb|CAB03089.2| C. elegans protein F39H2.3, confirmed by transcript evidence [Caenorhabditis elegans] gi|54110919|emb|CAB03184.2| C. elegans protein F39H2.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 280 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 14/270 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + Sbjct: 6 LIKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQTQNGLAAFLLNTKGRIVEDVLLWRRGT 65 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D LE + + L ++L Y+LR V I E + D RFS Sbjct: 66 DDLFLECSKENKTILTKEILKYRLRKQVEITESSDQIFF----TEDVSDKQAHRDPRFSG 121 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + +E ++ + + Y LR + GI + + + + + P A DLLN +SL K Sbjct: 122 FGARVFGNPSSSE-VSENREKYENLRRSAGIAEGSQEL--AELLPFQANGDLLNMVSLDK 178 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241 GCY+GQE+ +R H +IR+R + + G+ +L + ++G + + L I Sbjct: 179 GCYVGQELTARTAHTGVIRRRILPFECEGQV-KIGAEVLDEKKNKVGKIISSDTTRCLGI 237 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ++ K LT GV + A P W Sbjct: 238 LQLSSF-----KSQKLTADGVSLTAKQPEW 262 >gi|58696941|ref|ZP_00372437.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|58698833|ref|ZP_00373708.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58698939|ref|ZP_00373799.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630247|ref|YP_002727038.1| aminomethyl transferase family protein [Wolbachia sp. wRi] gi|58534541|gb|EAL58680.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534649|gb|EAL58773.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58536828|gb|EAL60046.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592228|gb|ACN95247.1| aminomethyl transferase family protein [Wolbachia sp. wRi] Length = 268 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 8/269 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS----F 115 + T +LE + +I+KL K V I ++ + V + +N + +S F Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLKVKIKDVSALYKVGVLFNTKLAECSSESQVIF 119 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R + + + E + D Y ++RI + + D D + ++ FP L+D + Sbjct: 120 QDPRHKLLGMRIIHKDEIKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDKV 178 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV 234 NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L V Sbjct: 179 NGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSSV 238 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVR 263 LA+ K + G V ++ Sbjct: 239 DNIGLALLNTGKSYANLYAGGVKCVKTLK 267 >gi|302652124|ref|XP_003017922.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517] gi|291181507|gb|EFE37277.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517] Length = 409 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 131/347 (37%), Gaps = 78/347 (22%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60 +L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107 Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103 E E +++E+D+ + L+ +KLRS + +G + Sbjct: 108 ETASSPAGEMEYLIELDKETSEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152 W++ F ++ I A + +R K+ S I+ Y R+ G Sbjct: 168 WHESEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDETSIEAYTLRRMLRG 227 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + + Sbjct: 228 VGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYES 287 Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247 PPSG+ + G +G LA+ R++ + Sbjct: 288 TKTLPTSDMPIYDPDTSITPPPSGAEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIM 347 Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273 + + G A +VKA P W K Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394 >gi|91205503|ref|YP_537858.1| glycine cleavage T-protein [Rickettsia bellii RML369-C] gi|157827218|ref|YP_001496282.1| glycine cleavage T-protein [Rickettsia bellii OSU 85-389] gi|91069047|gb|ABE04769.1| Glycine cleavage T-protein [Rickettsia bellii RML369-C] gi|157802522|gb|ABV79245.1| Glycine cleavage T-protein [Rickettsia bellii OSU 85-389] Length = 273 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 11/273 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+N+ IK+ G ++ FLQ + T D+ Y + +L QG+ L F + + Sbjct: 5 LNNREVIKIAGSDSLKFLQNLTTNDINKSNY---CYTYLLNNQGRYLFDFFVYVHNIEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++ID + +LID L FYK RS + I + + + + + S + D R+++ Sbjct: 62 YIDIDEKSKTALIDHLNFYKFRSKIEIVDCKDEYKIAYFHQELNMDSLVTARDPRYNLLG 121 Query: 125 VL-LHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + + + +I ++ Y + + N I+D D + P ++ L G+S Sbjct: 122 FRSITLSQSCHSRIGGNLSKKLYLDDKYNFAIIDGVDDLIVGKSIPTLYGIEELKGVSYD 181 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ I +DL IL + IG + KA+ Sbjct: 182 KGCYVGQEVISRAKYQGVIRRKIYKIIAEEDLSSLIKDEEILAGNDSIGIICSSYQNKAI 241 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ + +K + K + V GV+V S WY Sbjct: 242 ALVKEEK--YLASKEEDINVGGVKVDLSLAPWY 272 >gi|327298835|ref|XP_003234111.1| aminomethyl transferase [Trichophyton rubrum CBS 118892] gi|326464289|gb|EGD89742.1| aminomethyl transferase [Trichophyton rubrum CBS 118892] Length = 409 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 130/347 (37%), Gaps = 78/347 (22%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60 +L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107 Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103 E E +++E+D+ + L+ +KLRS + +G + Sbjct: 108 ETASSPAGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152 W++ F ++ I A + +R K+ S I+ Y R+ G Sbjct: 168 WHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRRMLRG 227 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + Sbjct: 228 VGEGQVEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYKS 287 Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247 PPSG+ + G +G LA+ R++ + Sbjct: 288 TKTLPTSDMPVYDPDTSITPPPSGAEANISKAGASKGRSAGKFLNGIGNVGLAVCRLEIM 347 Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273 + + G A +VKA P W K Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394 >gi|326472590|gb|EGD96599.1| aminomethyl transferase [Trichophyton tonsurans CBS 112818] Length = 408 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 128/346 (36%), Gaps = 77/346 (22%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60 L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 RLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107 Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSW 104 E E +++E+D+ + L+ +KLRS + +G W Sbjct: 108 ETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNTSGW 167 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHGI 153 ++ F S+ I S A + +R +K+ S + Y R+ G+ Sbjct: 168 HENDVFKESNAIICPDSRAPGMGYRVIASGDKLPSRITEAFPGDETSFEAYTLRRMLQGV 227 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + + Sbjct: 228 GEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYEST 287 Query: 214 -------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARID--- 245 PPSG + G +G LA+ R++ Sbjct: 288 QAPPTSDIPVYDPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMT 347 Query: 246 -----------KVDHAIKKGMALT-VHGV------RVKASFPHWYK 273 K T V G +VKA P W K Sbjct: 348 DIALTGESTQYDAKQEFKITWDFTEVGGTNIADQPKVKAFVPPWIK 393 >gi|229586836|ref|YP_002845337.1| GcvT-like putative aminomethyltransferase [Rickettsia africae ESF-5] gi|228021886|gb|ACP53594.1| GcvT-like putative aminomethyltransferase [Rickettsia africae ESF-5] Length = 335 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 132/333 (39%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------------------------------LT 33 LSN+ IK+ G ++ FLQ +IT D+ Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGKTMSNAVGESK 64 Query: 34 LPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 L + +L QG+ L F + + L+ID+S + +LI L FYK RS + +I Sbjct: 65 LIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIKYLNFYKFRSKIQVI 124 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146 + V+ S + S + D R++ + G I D + Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWLS 184 Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R+ G I+D D + P+ + LN IS Sbjct: 185 HRVTEGEPSSSKTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+ Sbjct: 245 KGCYVGQEVISRTKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|4586118|emb|CAB40954.1| putative protein [Arabidopsis thaliana] gi|7267914|emb|CAB78256.1| putative protein [Arabidopsis thaliana] Length = 363 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 113/307 (36%), Gaps = 56/307 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAI 44 + L ++S ++ G + FLQ ++T DV +A+ Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYAAL 91 Query: 45 LTPQGKILLYFLIS---------------------KIEEDTFILEIDRSKRDSLIDKLLF 83 LTPQG+ L F + + ++D D L++ L Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y+LRS V IE + W + S D E +D Sbjct: 152 YRLRSKVDIEN--VAEEFSCWQRYGRNLTGSSSVGWGGGVDRAAPLVEADKE---TDESN 206 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y R+ HG+ + + + P + LN IS KGCY+GQE+++R HR +IRKR Sbjct: 207 YLLWRLEHGVAEGSAEIPKGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKR 266 Query: 204 PMIITGTDD-------LPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKG 254 + + D +G+ ++ ++GT+ +G + + + R V+ A K Sbjct: 267 LIPLRFIDSNGKELNQKIAAGAEVVESGTGKKMGTVSTALGSRGMGVMR---VEEAFKPS 323 Query: 255 MALTVHG 261 L V Sbjct: 324 AELAVKD 330 >gi|322707198|gb|EFY98777.1| aminomethyl transferase, putative [Metarhizium anisopliae ARSEF 23] Length = 379 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 62/333 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISK 59 L ++ + V G A FLQ IITA++ LP A S L G+++ I Sbjct: 39 LAALPSRQLLSVSGPEATKFLQGIITANMTNAEGLPRTDAFYSGFLNATGRVVHDIFIYP 98 Query: 60 ----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNS 113 ++D +++E D + + YKLR+ V + P + V +W+ + Sbjct: 99 FRQAKQDDGYLIEADAGEMARFAKLIKRYKLRAKVTVRNVPPDEASVWQAWDDASPLDIA 158 Query: 114 S------FIDERFSIADVLLHRTWGHNEKIASDI---KTYHELRINHGIVDPNTDFLPST 164 + D R + + ++ D + Y R G+ + + L Sbjct: 159 ASESRVVLKDPRAPGLGHRIVQLNHKAPELDVDASTEEAYTIRRYLQGVAEGQDEILREQ 218 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP------- 215 P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR + I D PP Sbjct: 219 ALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCAIYSEDKAPPQTLSYDP 278 Query: 216 ---SGSPILTD--------------DIEIGTLGVVVGKKALAIARI----------DKVD 248 S + D G VG L + R+ ++ Sbjct: 279 ECASPESLTADMIPAETSIGRFGKKGRSAGKWLKGVGNIGLGLCRLEIMTDVVLPGEQAA 338 Query: 249 HAIKKGMALTVH--------GVRVKASFPHWYK 273 K G + V+VKA P W + Sbjct: 339 ATYKPGNEFVLEWGDEDNKSDVKVKAFVPKWLR 371 >gi|322698390|gb|EFY90160.1| aminomethyl transferase, putative [Metarhizium acridum CQMa 102] Length = 385 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 126/339 (37%), Gaps = 68/339 (20%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISK 59 L ++ + V G A FLQ I+TA++ LP A S +L G+++ I Sbjct: 39 LAALPSRQLLSVSGPEATKFLQGIVTANMTNAEGLPRTDAFYSGLLNATGRVVHDIFIYP 98 Query: 60 ----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107 ++D +++E D + L + YKLR+ V + P + V +W++ Sbjct: 99 FRQGGSGLQAKQDDGYLIEADAGEVARLAQLIKRYKLRAKVTVRNVPPDEASVWQAWDEA 158 Query: 108 HTFSNSS------FIDERFSIADVLLHRTWGHNEKIASDIK---TYHELRINHGIVDPNT 158 ++ D R + + ++ D Y R HG+ + Sbjct: 159 SPLEIAASESRVVLRDPRAPGLGYRIVQLSHKAPELDVDASTEDAYTIRRYLHGVAEGQD 218 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP- 215 + L P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR + I G D PP Sbjct: 219 EILREQALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYGEDKAPPQ 278 Query: 216 ---------SGSPILTD--------------DIEIGTLGVVVGKKALAIARI-------- 244 S + D G VG L + R+ Sbjct: 279 TLLYDPECASPESLTADMIPAETSIGRFGKKGRSAGKWLKGVGNIGLGLCRLEIMTDVVL 338 Query: 245 --DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273 ++ K G + V+VKA P W + Sbjct: 339 PGEQAAATYKPGDEFVLEWGNEDNKSDVKVKAFVPGWLR 377 >gi|302805709|ref|XP_002984605.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii] gi|300147587|gb|EFJ14250.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii] Length = 404 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 72/352 (20%), Positives = 122/352 (34%), Gaps = 82/352 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44 + +L +++ + G FLQ + T DVL L + I Sbjct: 45 ASHLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGI 104 Query: 45 LTPQGKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKL 86 L PQG+ L + K +++ + ++D + D LI L Y L Sbjct: 105 LNPQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYIL 164 Query: 87 RSNVIIEIQPINGVV--------------------LSWNQEHTFSNSS-----------F 115 RS V IE + + W S ++ F Sbjct: 165 RSKVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGNGWRWF 224 Query: 116 IDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + G + D + Y R+ G+ + + P + Sbjct: 225 KDPRLDALGFRGVFSSGITPPLIEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-------DDLPPSGSPILTD 223 M LN IS KGCY+GQE+++R +R IRKR M + + G+ I+ Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIVDG 344 Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272 ++G++ +G + LA+ R++ K ++ G VK P W+ Sbjct: 345 ETGKKVGSVITALGSRGLAMVRLEAAAKDRLKLQSVDGGCGASVKPIRPKWW 396 >gi|42520194|ref|NP_966109.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409932|gb|AAS14043.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 268 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 10/270 (3%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114 + T +LE + +I+KL K LR + ++ + V + +N + +S Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 F D R + + + E + D Y ++RI + + D D + ++ FP L+D Sbjct: 119 FQDPRHKLLGMRIIHKDEMKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDK 177 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233 +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L Sbjct: 178 VNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSS 237 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 V A+ K + G V ++ Sbjct: 238 VDNIGFALLNTGKSHANLYAGGVKCVKTLK 267 >gi|259416996|ref|ZP_05740916.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B] gi|259348435|gb|EEW60212.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B] Length = 248 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++++ ++ G FLQ ++T D+ L + +AILTPQGK L F ++ E + Sbjct: 1 MADRRIFRLHGPDTHSFLQGLVTNDINRLEDGL-VYTAILTPQGKYLADFFLAP-EGEAV 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L++ D L+ +L YKLR+NV I+ + + D R + Sbjct: 59 LLDVADDLADDLLKRLKMYKLRANVTIDETDLK----VRRGTGEAPAGALTDPRHT---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G + D + +R+ H I + + P + + + LNG+ KGCY Sbjct: 112 LGWRFYG--DVAGEDGSDWDAIRVAHVIPETGIELTPDSYI-LEVGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + +P G+ I +G + G KA+A R D Sbjct: 169 VGQEVTARMKHKTELRKGLTQVEIDGAVP-VGAQITAAGKPVGQVLTQSGGKAIAYLRFD 227 Query: 246 KVDHAIKK-GMAL 257 + A++ G AL Sbjct: 228 RAKGALEAEGTAL 240 >gi|212533241|ref|XP_002146777.1| aminomethyl transferase, putative [Penicillium marneffei ATCC 18224] gi|210072141|gb|EEA26230.1| aminomethyl transferase, putative [Penicillium marneffei ATCC 18224] Length = 457 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 131/370 (35%), Gaps = 99/370 (26%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFL 56 L+N+S I + G + FLQ +IT ++ + P +I SA L QG++L Sbjct: 48 YARLTNRSLIAISGADSTSFLQGMITQNMLMGKEPVRAPRRIGTYSAFLNSQGRVLHDVF 107 Query: 57 ISKI------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVL 102 I I +E +++E+D+S+ +L+ L +KLR+ + + + V Sbjct: 108 IYPITKGSLGHTNDSTDEAAWLIEVDKSEVTNLMKHLKKHKLRAKLTLRALEEGEQSVWA 167 Query: 103 SWNQEHTFSNSSF---------------------IDERFSIADVLLHRTWGHNEKI---- 137 +WN+ + ID R + ++ Sbjct: 168 AWNESAERPRWAAYNLESDFPSQLSDNESFVVGCIDTRAPGFGTRYVTPGAEDLQVHLSE 227 Query: 138 -------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 ++TY RI HG+ + + + + P + MD+ I KGCY+GQE+ Sbjct: 228 ETKILGSEVGLETYKLRRILHGVAEGQQEIIRESSLPMECNMDVSQAIDFRKGCYVGQEL 287 Query: 191 VSRIQHRNIIRKRPMIITGTD---------------------DLPPSGSPI-----LTDD 224 R H ++RKR + + PP+G+ I Sbjct: 288 TIRTHHTGVVRKRILPMQLYGIDENTLTSSASALIYDPSTDIPQPPTGANISQKASTRKG 347 Query: 225 IEIGTLGVVVGKKALAIARID--------------------KVDHAIKKGMALTVHG-VR 263 G L VG L + R++ +V + T G V+ Sbjct: 348 RSAGKLISGVGNVGLGLCRLEMMTDISLTGEGSKFNPLQEFQVTWDADPVVETTSSGAVK 407 Query: 264 VKASFPHWYK 273 VKA P W + Sbjct: 408 VKAIVPSWLR 417 >gi|39977165|ref|XP_369970.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15] gi|158514087|sp|A4R8F9|CAF17_MAGO7 RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|145016089|gb|EDK00579.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15] Length = 389 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 122/327 (37%), Gaps = 60/327 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EE 62 L ++ I V G A +LQ ++TA+++ K +A L QG++L I + Sbjct: 54 LKSRRLISVSGPDAAKYLQGVVTANIIN-NNKTGFYTAFLNAQGRVLHDVFIYPDASKDG 112 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSF----- 115 + F++E+D ++ + L + YKLR+ + + + V +W+ + Sbjct: 113 EGFLIEVDATEAERLTRHIKRYKLRAKLNLRLLDDGEATVWQAWDDSKADFAPAVGMTTP 172 Query: 116 -IDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD 169 D R + + H + D+ +Y R G+ + T+ L P + Sbjct: 173 VRDPRSPMLGYRVLTPGDHAQTPQLDLDPTPETSYRIRRYLQGVAEGQTEILREHALPAE 232 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--------------- 214 + MD+ I KGCY+GQE+ R +HR ++RKR + D Sbjct: 233 SNMDVTGAIDFRKGCYVGQELTIRTRHRGVVRKRILPCVLYDHFAAPERLEYKHDGVVTA 292 Query: 215 ---PSGSPI---LTDDIEIGTLGVVVGKKALAIARID---------KVDHAIKKG----- 254 P + I G VG LA+ R++ + A++ G Sbjct: 293 EGVPPETSIGRATKRGRSTGKWLSGVGNIGLALCRLEIMTDLTLPGEPAAALESGNDEFV 352 Query: 255 ------MALTVHGVR--VKASFPHWYK 273 + G VKA P W + Sbjct: 353 LTPKSDEDVGSEGAPFKVKAFVPDWLR 379 >gi|239946743|ref|ZP_04698496.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921019|gb|EER21043.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 308 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 47/309 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT + + +L QG+ L F + + Sbjct: 5 LSNREVIKIIGLDSVKFLQNLITNYIKK---NNYCYTYLLNNQGRYLFDFFVYVPNLEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++ Sbjct: 62 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTMLG 121 Query: 125 VLLHRTWG---------------------------------------HNEKIASDIKTYH 145 +G + + + K Y Sbjct: 122 FRSIYEFGVIPQLDRGIQKTIKQDWIPRSSRGMTRVESVHATIPPRESGDPASFNEKLYL 181 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++ Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241 Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 IT +DL IL D+ +IG + KA+A+ R +K + K +TV G++ Sbjct: 242 KITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALIREEK--YLADKEADITVKGIK 299 Query: 264 VKASFPHWY 272 + S WY Sbjct: 300 INLSLAPWY 308 >gi|241068687|ref|XP_002408509.1| glycine cleavage T protein, putative [Ixodes scapularis] gi|215492497|gb|EEC02138.1| glycine cleavage T protein, putative [Ixodes scapularis] Length = 256 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 9/244 (3%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT + + +L QG+ L F + + Sbjct: 10 LSNREVIKIIGLDSVKFLQNLITNYIKK---NNYCYTYLLNNQGRYLFDFFVYVPNLEEI 66 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++ Sbjct: 67 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTM-- 124 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L R+ + + + K Y E + N I+D D + P+ + LN IS KGC Sbjct: 125 -LGFRSIYDGDPASFNEKLYLEDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGC 183 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIA 242 Y+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+A+ Sbjct: 184 YVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALI 243 Query: 243 RIDK 246 R +K Sbjct: 244 REEK 247 >gi|168048459|ref|XP_001776684.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671976|gb|EDQ58520.1| predicted protein [Physcomitrella patens subsp. patens] Length = 427 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 126/349 (36%), Gaps = 82/349 (23%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-----------------RGSAILTPQ 48 L ++ I+ G + FLQ +IT DV + +A+L Q Sbjct: 63 LKTRTVIRFDGPDVLNFLQGLITNDVKKFEDSPSGGTSPPSVNASILYHPPMYTAMLNSQ 122 Query: 49 GKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKLRSNV 90 G+ L + K + + ++D + L+ L + LR V Sbjct: 123 GRFLYDLFLYKPNVEEEKLDRTGSGPGESRNAPVLLADVDSAVAVELVTYLKKHILRKKV 182 Query: 91 II-EIQPINGVV-----------------------LSWNQEHTFSNSSFI---------D 117 + +I V ++ + S+S + D Sbjct: 183 QVHDISEDLSVWQYYGGKLAEHPSNTTESEGGAIGYGGTKDESASSSVLVNDNQWRWYKD 242 Query: 118 ERFSIADVLL----HRTWGHNEKIASDIKTYHEL-RINHGIVDPNTDFLPSTIFPHDALM 172 R S + H E + Y+ L R+ G+ + +T+ P + + Sbjct: 243 PRLSTLGLRGLFSKHTPPPLVEANTEVEEDYYLLWRLEQGVAEGSTEIPKGEAIPLEYNL 302 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------DLPPSGSPILTD-- 223 LN IS KGCY+GQE+V+R HR +IRKR M ++ TD G+ +L Sbjct: 303 AGLNAISFDKGCYVGQELVARTHHRGVIRKRLMPLSFTDTNGKEAQAAVAVGAEVLDKRI 362 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++G + V+G +AL + R++ + H + VKA P W+ Sbjct: 363 GKKVGKVSTVLGPRALGMIRLESAREGNNQLCIENQHDILVKAVRPKWW 411 >gi|328773851|gb|EGF83888.1| hypothetical protein BATDEDRAFT_36379 [Batrachochytrium dendrobatidis JAM81] Length = 366 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 125/332 (37%), Gaps = 62/332 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIE 61 L N+ +++ G A FLQ ++T + ++P + +A L QG++L+ I + Sbjct: 29 YALLKNRMVLRLEGSDAAIFLQGLVTNHITDSMPENSLKLAAFLNAQGRVLMDAFIYREP 88 Query: 62 ED------TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSW------NQEH 108 ++ +F++E + L L YKLR V I I V W ++ Sbjct: 89 KNPESTGPSFLVECADTVIPLLEKHLQRYKLRKQVKITNISDSVDVWQIWGSLDRDQLKN 148 Query: 109 TFSNSSFIDERFSIADVLLH-----RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + D R + + +T ++ Y RI GI + TDF Sbjct: 149 SDGGMWCADPRNADMGMRGIALKTCQTLLPDQMKKVPFTDYVARRICLGIPEGPTDFFYE 208 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-------------- 209 P ++ ++L+ G+ KGCY+GQE+ R H RKR + + Sbjct: 209 KSLPLESNLELIQGVDFQKGCYLGQELTIRTYHTGFTRKRIVPVQLYNEHDPVPKSLSLD 268 Query: 210 ---TDDLPPSGSPILTDDIE------------IGTLGVVVGKKALAIARIDKVDHAIKKG 254 T + PPS S I D+ +G + LA+ R++ V ++ Sbjct: 269 TSITMEHPPSQSDIKLGDLTSEETTLTRSKGVVGKYCGGLHNIGLALVRLESVVRPLENQ 328 Query: 255 MAL--------------TVHGVRVKASFPHWY 272 L +G+R +A P W+ Sbjct: 329 SMLGSSDLSSNEIKPLILANGMRARAFAPLWW 360 >gi|294678627|ref|YP_003579242.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003] gi|294477447|gb|ADE86835.1| glycine cleavage T protein-2 [Rhodobacter capsulatus SB 1003] Length = 247 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 13/248 (5%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G+ FLQ +++ D+ L +A+LTPQGK L F + E +L+ Sbjct: 2 RKIFDITGQDREHFLQGLVSNDLRRLAEGP-LYAALLTPQGKYLADFFLIARGE-AILLD 59 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 I+ + ++ + +L Y+LR++V I ++ + + D R L+ Sbjct: 60 IEAAIAEATVARLNMYRLRADVAIAPSALS----VFCGTGPAPEGALSDPRHPELGWRLY 115 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 ++ LR+ H I + P T +A + L+G+ KGCY+GQ Sbjct: 116 GDRDGDDGSDW-----DALRVAHLIPATGIELTPETYI-LEAGFERLHGVDFRKGCYVGQ 169 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 EV +R++H+ +RK + + + P G+PI +GTL G KALA R+D ++ Sbjct: 170 EVTARMKHKTELRKGLVQLAISGAAP-VGTPIGAGGKTVGTLYTQSGGKALAQLRLDALE 228 Query: 249 HAIKKGMA 256 ++ G A Sbjct: 229 GPMQAGEA 236 >gi|51473652|ref|YP_067409.1| hypothetical protein RT0451 [Rickettsia typhi str. Wilmington] gi|51459964|gb|AAU03927.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 286 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 25/287 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ IK+ G ++ FLQ +IT D+ K + +L QG+ L F + ++ Sbjct: 5 LSNRKIIKIIGLDSLMFLQKLITNDICN---KRYCYTYLLNNQGRYLFDFFVYVHHKEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++ID+S + +LI L FYKLRS + II+ V+ S + + D R++ Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHQKLDIDMLITVRDPRYAKLG 121 Query: 125 VLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPSTIFP 167 ++++K Y E + N I+D D + + P Sbjct: 122 FRSINKLDIITCTSNNVKDMESISSITSYRQSMNPIYLEDKYNFAIIDGIEDLITNKSIP 181 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDI 225 + + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL ++ Sbjct: 182 NMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKIYRITAYEDLLSLVQDDVILANNE 241 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +IG + K +A+ ++K H K +TV G+++ S WY Sbjct: 242 KIGVICSSYQNKGIALI-MEKKYHDYKT-YNITVKGIKINLSLAPWY 286 >gi|315041995|ref|XP_003170374.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893] gi|311345408|gb|EFR04611.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893] Length = 407 Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 129/344 (37%), Gaps = 76/344 (22%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK-- 59 L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 49 LNNRSLISLSGVDSTGFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPFQ 108 Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SWNQ 106 E +++E+D+ SL+ +KLRS + + +W++ Sbjct: 109 TANSAAGEMEYLIEVDKETSGSLLKHFKRHKLRSKLKFRALDEGERSVWSLWDDGNTWHE 168 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHGIVD 155 F ++ I A + +R +K+ S I+ Y RI G+ + Sbjct: 169 NEAFKENNIIACPDGRAPGMGYRVIASGDKLPSRFIEAFPGDETSIQAYTLRRILQGVGE 228 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---D 212 + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + D + Sbjct: 229 GQAEMARESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYDSTLE 288 Query: 213 LPPSGSPILTDD----------------------IEIGTLGVVVGKKALAIARIDKVD-- 248 P S +P+ D G +G LA+ R++ + Sbjct: 289 PPTSDTPVYNPDTNITLPPFGIEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMTDI 348 Query: 249 -------------------HAIKKGMALTVHGVRVKASFPHWYK 273 + + G +VKA P W K Sbjct: 349 TLTGESTQYDPSQEFKITWDSSEVGSVQNADQPKVKAFVPSWIK 392 >gi|302793815|ref|XP_002978672.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii] gi|300153481|gb|EFJ20119.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii] Length = 404 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 72/352 (20%), Positives = 121/352 (34%), Gaps = 82/352 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44 + L +++ + G FLQ + T DVL L + I Sbjct: 45 ASRLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGI 104 Query: 45 LTPQGKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKL 86 L PQG+ L + K +++ + ++D + D LI L Y L Sbjct: 105 LNPQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYIL 164 Query: 87 RSNVIIEIQPINGVV--------------------LSWNQEHTFSNSS-----------F 115 RS V IE + + W S ++ F Sbjct: 165 RSKVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGKGWRWF 224 Query: 116 IDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + G + D + Y R+ G+ + + P + Sbjct: 225 KDPRLDALGFRGVFSSGITPPLVEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-------DDLPPSGSPILTD 223 M LN IS KGCY+GQE+++R +R IRKR M + + G+ I+ Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIMDG 344 Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL-TVHGVRVKASFPHWY 272 ++G++ +G + LA+ R++ K ++ G VK P W+ Sbjct: 345 ETGKKVGSVVTALGSRGLAMVRLEAAAKDRLKLQSVDGGGGAFVKPIRPKWW 396 >gi|238499867|ref|XP_002381168.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357] gi|220692921|gb|EED49267.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357] Length = 448 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 130/364 (35%), Gaps = 93/364 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT D + +A L QG++L Sbjct: 46 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 105 Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106 + + +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 106 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 165 Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137 +++ ID R L + + Sbjct: 166 HEQPRWAAYNLESSSSSPFSPSSSIAGCIDTRAPGFGSRLITPGAEDLRTHVPDETQIAG 225 Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H Sbjct: 226 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 285 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232 ++RKR + + D L +G+P+ E+ G Sbjct: 286 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 345 Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269 VG LA+ R++ + A ++G + V+VKA P Sbjct: 346 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 405 Query: 270 HWYK 273 W + Sbjct: 406 SWTR 409 >gi|317150522|ref|XP_001824084.2| transferase caf17 [Aspergillus oryzae RIB40] Length = 448 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 72/364 (19%), Positives = 130/364 (35%), Gaps = 93/364 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT D + +A L QG++L Sbjct: 46 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 105 Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106 + + +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 106 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 165 Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137 +++ ID R + + + Sbjct: 166 HEQPRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAG 225 Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H Sbjct: 226 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 285 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232 ++RKR + + D L +G+P+ E+ G Sbjct: 286 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 345 Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269 VG LA+ R++ + A ++G + V+VKA P Sbjct: 346 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 405 Query: 270 HWYK 273 W + Sbjct: 406 SWTR 409 >gi|121799784|sp|Q2U664|CAF17_ASPOR RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|83772823|dbj|BAE62951.1| unnamed protein product [Aspergillus oryzae] Length = 447 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 72/364 (19%), Positives = 130/364 (35%), Gaps = 93/364 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT D + +A L QG++L Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 104 Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106 + + +E +++E+DR++ SL+ L +KLR+ + + V SW Sbjct: 105 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 164 Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137 +++ ID R + + + Sbjct: 165 HEQPRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAG 224 Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H Sbjct: 225 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 284 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232 ++RKR + + D L +G+P+ E+ G Sbjct: 285 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 344 Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269 VG LA+ R++ + A ++G + V+VKA P Sbjct: 345 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 404 Query: 270 HWYK 273 W + Sbjct: 405 SWTR 408 >gi|157964644|ref|YP_001499468.1| putative aminomethyltransferase [Rickettsia massiliae MTU5] gi|157844420|gb|ABV84921.1| Putative aminomethyltransferase [Rickettsia massiliae MTU5] Length = 338 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP------------------------------ 35 LSN+ IK+ G ++ FLQ +IT D+ Sbjct: 8 LSNREVIKIIGFDSVKFLQNLITNDICKSNSVEFGYKEQGAKPIIIGETTSNAVGESKSI 67 Query: 36 YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+ Sbjct: 68 DYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVIDC 127 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIA--------DVLLHRTWGHNEKIASDIKTYHE 146 V+ S + S + D R++ DV+ G + I D + Sbjct: 128 SDEYKVIYSLQKLDINSLITVRDPRYAKLGFRSINKLDVIPWLDRGIQKIIKKDWTPWSS 187 Query: 147 L-------------------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + N I+D D + P+ + LN IS Sbjct: 188 HGVTEGAPPPSTTSPSESGNLIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 247 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+ Sbjct: 248 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 307 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 308 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 338 >gi|34581578|ref|ZP_00143058.1| hypothetical protein [Rickettsia sibirica 246] gi|28262963|gb|EAA26467.1| unknown [Rickettsia sibirica 246] Length = 335 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38 LSN+ IK+ G ++ FLQ +IT D V ++ + Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64 Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146 + V+ S + S + D R++ + G I D + Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSS 184 Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R+ G I+D D + P+ + LN IS Sbjct: 185 HRVTEGESPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+ Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|308498249|ref|XP_003111311.1| hypothetical protein CRE_03852 [Caenorhabditis remanei] gi|308240859|gb|EFO84811.1| hypothetical protein CRE_03852 [Caenorhabditis remanei] Length = 280 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 14/270 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + Sbjct: 6 LIKLPHRVLLKLHGADTNVFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGT 65 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + LE + +D L+ +++ Y+LR V I + +++ D RF+ Sbjct: 66 EDVFLECSKVNQDVLVKEIVKYRLRKRVEISETSDQ----VFFEQNPSDKHEHRDPRFAG 121 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + +E I+ + + Y LR + GI + + + + P A DLLN +SL K Sbjct: 122 FGARIFGNPPSSE-ISENREAYENLRRSTGIAEGADEL--ADLLPFQANGDLLNMVSLDK 178 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241 GCYIGQE+ +R H +IR+R + + G+ IL + ++G + + L I Sbjct: 179 GCYIGQELTARTAHTGVIRRRILPFECEGQV-KIGADILDEKKNKVGKVISSDTTRCLGI 237 Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ++ K LT V + A P W Sbjct: 238 LQLSSF-----KSSKLTADEVSLTAKQPEW 262 >gi|296422045|ref|XP_002840573.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636792|emb|CAZ84764.1| unnamed protein product [Tuber melanosporum] Length = 388 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 115/331 (34%), Gaps = 68/331 (20%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------- 59 + I++ G+ A +LQ + T D+ + SA L QGK+L I Sbjct: 38 RQLIEIHGRDAPKYLQGLTTGDIPMQSDSLGTYSAFLNAQGKVLYDIFIYPTNRNHRWRA 97 Query: 60 --------------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--I 97 ++E F +E D D+L++ + YKL S + P Sbjct: 98 QIEQKNFQPPGCPPTKKGPEVDEPGFFIECDIRSADALLNHIRRYKLSSKFHSRLIPKGE 157 Query: 98 NGVVLSWNQEHTFSNS----SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + W+ S D R + G N + D++ Y+ R+ HG+ Sbjct: 158 WDMWAIWDDHRLLPTSLGEIGCTDTRAPNLGKRVAVFGGKNIGVEVDVEVYNVRRMLHGV 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + + L ++ MD + G+ KGCY+GQE+ R H ++RKR + + Sbjct: 218 PEGQNEILNGGNIAQESNMDYMGGVDFRKGCYVGQELTIRTHHTGVVRKRVLPVQLFRPE 277 Query: 214 PPSGSPILTD----------------------DIEIGTLGVVVGKKALAIARID------ 245 P + D G VG LA+ R++ Sbjct: 278 DPVPEKLTYDPNLDLAPLLPGETLNISKLEESGRSAGKFLRGVGNIGLALCRLEIMTDLE 337 Query: 246 ---KVDHAIKKGMALTVHG--VRVKASFPHW 271 K + L V G +RVKA P W Sbjct: 338 NGRKREGKTVPEFKLDVEGSELRVKAFVPEW 368 >gi|67906657|gb|AAY82747.1| predicted aminomethyltransferase [uncultured bacterium eBACmed18B02] Length = 296 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 27/289 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ + + G A+ FLQ +I+ D+ + + +++L+PQGK L F+I K + + Sbjct: 9 LKDRAILYINGDDAVSFLQNLISNDINKVSETYSCFASLLSPQGKFLYEFIIVK-HKSGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--------- 114 +++ ++S+ D L +L YKLRS V I VV +++ E TF + Sbjct: 68 LIDCEKSQVDELYKQLSVYKLRSKVEILNLSNEFVVAAFSYEKFLTFDEAKKVPGFTLKF 127 Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 F+D R L + + E +DI Y+ L GIV N + L Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLELHDADINEYYSLSHKLGIVPKNLNQLQ 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 + F + D LNGI KGCY+GQE +RI+ +N + KR + I D G I Sbjct: 188 NKAFGIECNYDELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIDIIDGKLHEGEGIFN 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + EIG + + + A+ + +D + +K P W Sbjct: 248 KENEIGKVL-INNEYPFALIKF--LDKNFDENAEFKTKEASIKIKKPEW 293 >gi|121713844|ref|XP_001274533.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1] gi|158512623|sp|A1CBI9|CAF17_ASPCL RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|119402686|gb|EAW13107.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1] Length = 450 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 128/366 (34%), Gaps = 95/366 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT ++L +A L QG++L Sbjct: 45 YARLTNRGLISITGIDSTTFLQGLITQNMLVANDPNRAIRRTGTYAAFLNSQGRVLNDAF 104 Query: 57 ISKI----------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104 I + E+ +++E+D+ + SL+ L +KLRS + + V SW Sbjct: 105 IYPMPRVDGGAAAPEDPAWLVEVDKCEVSSLMKHLKKHKLRSKLKLRALEDGERTVWSSW 164 Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137 +++ +D R + G + ++ Sbjct: 165 KDHTEPRWAAYNLESESSSQFSPSSPIAGCVDTRAPGFGSRIVTPGGEDLRMHFPDEAQV 224 Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 D+ Y R+ HGI + ++ + + P + MD+ G+ KGCY+GQE+ R Sbjct: 225 AGGEVDLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMARGVDFRKGCYVGQELTIRT 284 Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230 H ++RKR + + + PPSG+ I G Sbjct: 285 HHTGVVRKRIVPVQLYTGAQDTVPVDGLPAYDSSVEVPSPPSGTNISKVGARKGRSAGKF 344 Query: 231 GVVVGKKALAIARIDKVDH---------------------AIKKGM--ALTVHGVRVKAS 267 VG LA+ R++ + A +G V++KA Sbjct: 345 LGGVGNIGLALCRLEMMTDIVLTSEGTQYNPETEFKVSWTAADEGPVGPSDSGEVKIKAF 404 Query: 268 FPHWYK 273 P W + Sbjct: 405 VPPWLR 410 >gi|238650862|ref|YP_002916717.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic] gi|238624960|gb|ACR47666.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic] Length = 335 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38 LSN+ IK+ G ++ FLQ +IT D V ++ + Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64 Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146 + V+ S + S + D R++ + G I D ++ Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWISWSS 184 Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R+ G I+D D + P+ + LN IS Sbjct: 185 HRVTEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+ Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|222475546|ref|YP_002563963.1| hypothetical protein AMF_881 [Anaplasma marginale str. Florida] gi|254995349|ref|ZP_05277539.1| hypothetical protein AmarM_05374 [Anaplasma marginale str. Mississippi] gi|255003537|ref|ZP_05278501.1| hypothetical protein AmarPR_04834 [Anaplasma marginale str. Puerto Rico] gi|255004662|ref|ZP_05279463.1| hypothetical protein AmarV_05199 [Anaplasma marginale str. Virginia] gi|222419684|gb|ACM49707.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 271 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 15/275 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++S ++V G A FL I T DVL + + + IL P+G+ + F + Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIPH 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 E++ F+L+ + D+L + L Y+L+ V ++ V N++ Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDEYAVAVHPNTVDSGNAANFEDAI 119 Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 F D R + + T ++ Y LRI I + D + + FP Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 MD LN ISL KGCYIGQE+V+R+ +K+ + G I G + Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTKTLVCGQEIFAQGQPAGHML 238 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + L + ++K+ G L G +K Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269 >gi|15892621|ref|NP_360335.1| hypothetical protein RC0698 [Rickettsia conorii str. Malish 7] gi|15619789|gb|AAL03236.1| unknown [Rickettsia conorii str. Malish 7] Length = 334 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 67/332 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38 LSN+ IK+ G ++ FLQ +IT D V ++ + Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIGETTSNAVGESKS 64 Query: 39 ----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIE 93 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+ Sbjct: 65 IDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVID 124 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHEL 147 V+ S + S + D R++ + G I D + Sbjct: 125 CSNEYKVIYSLQKLDIESLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSSH 184 Query: 148 RINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 R+ G I+D D + P+ + LN IS K Sbjct: 185 RVTEGEPPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDK 244 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALA 240 GCY+GQEV+SR +++ +IR++ IT +DL IL D+ IG + KA+A Sbjct: 245 GCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNTIGVICSSYHNKAIA 304 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + R +K + K +TV G+++ S WY Sbjct: 305 LIREEK--YLADKEADVTVKGIKINLSLAPWY 334 >gi|218197511|gb|EEC79938.1| hypothetical protein OsI_21522 [Oryza sativa Indica Group] Length = 401 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 98/365 (26%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---------------ILTP 47 + L++++ ++ G A FL++++T D+L R + +LTP Sbjct: 25 ACRLTSRAVVRFAGPEAGRFLRSLLTNDLLLSSSTQQRYAPTPNAPARAPPPAYAALLTP 84 Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77 QG+ L + + + +L+ +D ++ D L Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144 Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNS 113 + Y+LRS V I+ Q + W Q +H ++ Sbjct: 145 LACFKRYRLRSKVEIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAESA 204 Query: 114 S---------FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159 + F D R + +D + Y RI +G+ + +T+ Sbjct: 205 AQGNGHGWEWFKDPRLDCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVAEGSTE 264 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212 P + LN IS KGCYIGQE+++R HR +IRKR M + D+ Sbjct: 265 IPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQ 324 Query: 213 LPPSGSPILT--DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKAS 267 GS ++ +IGT+ +G + + + R++ A+K+ +L + VRVKA Sbjct: 325 AVAPGSEVVDKESGKKIGTVNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAI 381 Query: 268 FPHWY 272 P W+ Sbjct: 382 KPDWW 386 >gi|67906639|gb|AAY82733.1| hypothetical protein [uncultured bacterium eBACmed86H08] Length = 295 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 27/289 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ + + G + +LQ +I+ D+ + + +++L+PQGK L FL+ K +D + Sbjct: 9 LDDRAILYINGPDSDKYLQNLISNDIEKVNENKSCFASLLSPQGKFLFDFLVLK-HKDGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L+ ++ D L KL+ YKLRS V I VV +++ + S DE Sbjct: 68 FLDCEKKIVDQLYKKLVMYKLRSKVEILNLSNEFVVAAFSYDKFLSIEGAKDELGYTFKH 127 Query: 120 -------FSIADVLLHRTWGHNEKI----------ASDIKTYHELRINHGIVDPNTDFLP 162 L R + EK+ +S I YH+L GI N D L Sbjct: 128 NEDHVLLDPRNKKLGGRIIANLEKLYMSLKKMKLKSSKIDEYHKLSFELGIPQSNMDQLQ 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 +F + LN I KGCY+GQE SRI++++ + KR + + + PI++ Sbjct: 188 EKLFGIECNFVELNAIDFKKGCYVGQENTSRIKNKDKLNKRLLPLQVKKGSISNNDPIIS 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +++EIG + + + A+ + + + ++ P+W Sbjct: 248 NNVEIGKVL-IANTFSFALIKFK--NKEFEYNKEFKCGEANIEILKPNW 293 >gi|114798165|ref|YP_759588.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444] gi|114738339|gb|ABI76464.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444] Length = 271 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 15/268 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L +++ + + G I L+ +T V AR A+LTPQGKI+ ++ +I D Sbjct: 3 RLPDRAILSLTGPDTIALLERTVTHTVAGWAEGEARYGALLTPQGKIIADYIAHRIA-DG 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++++ D L+ +L ++LRS V I + S D R Sbjct: 62 VLIDVHEDAADDLMKRLKMFRLRSAVEIMRDEALVSAIDV--------SGVPDPRTPK-- 111 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L HR+ A + + L I+ G+ + D+ + +FP D MD++ GI KGC Sbjct: 112 -LPHRSIVPAGDAAEPLPGWDALAISAGVPEWGRDYRAAEVFPTDINMDVMTGIDYRKGC 170 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAIAR 243 ++GQEV SR++ + +IRKR + + G + G+ + +GT+ +ALA+ R Sbjct: 171 FVGQEVASRMKRKGLIRKRTVRLKGEGLVV--GAELRAGTAGSLGTVTSAAAGEALALIR 228 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271 D+ AI+ +TV+ + W Sbjct: 229 TDRFAKAIQDKQPVTVNDAPAEIDGAPW 256 >gi|302803303|ref|XP_002983405.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii] gi|300149090|gb|EFJ15747.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii] Length = 406 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 119/347 (34%), Gaps = 79/347 (22%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-----------------GSAIL 45 + LS+++ I G+ I FLQ + T ++ L +AIL Sbjct: 57 ACKLSSRAVIGFEGEDVIKFLQGLTTNNMNKLEQDSPTRLPHPTLNQPAVVQPPLYTAIL 116 Query: 46 TPQGKILLYFLISKI------------------EEDTFILEIDRSKRDSLIDKLLFYKLR 87 PQG+ L ++ K + ++D L L +KLR Sbjct: 117 NPQGRFLFDMVVFKPVQSTEKLDRSGTGPGSEKSAPKLVADVDAESVSDLFAHLTRHKLR 176 Query: 88 SNVIIEIQPINGVV-----------------LSWNQEHTFSNSSFI-----------DER 119 + + V + W + ++ D R Sbjct: 177 AKISFSDMSKELAVWQRFGGALECEGDNEGSVGWGAGRDVAGNTSASSNVQGWRWHKDPR 236 Query: 120 FSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + D + Y R+ GI + + P + ++ Sbjct: 237 TGCLGFRGIFPVESTPPLIDADQEVDEQYYLLWRLEQGIPEGPAEIRGGEAIPLEYNLEG 296 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------DLPPSGSPILTDD--I 225 LN I KGCY+GQE+V+R HR +IRKR M + D + G+ I+ + Sbjct: 297 LNAIDFDKGCYVGQELVARTHHRGVIRKRVMPVIFLDKDGEEISEAVSHGAEIVDAESSK 356 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++GT+ +G + A+ R++ V + G + ++VK P W+ Sbjct: 357 KMGTVTTALGSRGFALVRLEAVSKRLSIGGGMA--SIQVKVLRPKWW 401 >gi|56417181|ref|YP_154255.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries] gi|56388413|gb|AAV87000.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries] Length = 271 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 15/275 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++S ++V G A FL I T DVL + + + IL P+G+ + F + Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIPH 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 E++ F+L+ + D+L + L Y+L+ V ++ V N++ Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDAI 119 Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 F D R + + T ++ Y LRI I + D + + FP Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 MD LN ISL KGCYIGQE+V+R+ +K+ + + G I G + Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTNTLVCGQEISAQGQPAGHML 238 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + L + ++K+ G L G +K Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269 >gi|165933349|ref|YP_001650138.1| aminomethyltransferase family protein [Rickettsia rickettsii str. Iowa] gi|165908436|gb|ABY72732.1| aminomethyltransferase family protein [Rickettsia rickettsii str. Iowa] Length = 335 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38 LSN+ IK+ G ++ FLQ +IT D V ++ + Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64 Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146 + V+ S + S + D R++ + G I D + Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWSS 184 Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R+ G I+D D + P+ + LN IS Sbjct: 185 HRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IRK+ IT +DL + IL D+ +IG + KA+ Sbjct: 245 KGCYVGQEVISRAKYQGVIRKKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKAI 304 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|148284975|ref|YP_001249065.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str. Boryong] gi|146740414|emb|CAM80888.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str. Boryong] Length = 288 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 18/287 (6%) Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 M S +L +N++ +++ G A FL I T V+ A+ S IL+PQG+ L F + Sbjct: 1 MHSYHLLNNRAILELSGCDASNFLLRITTN-VIPAANGEAKYSMILSPQGRFLFDFFLIN 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSN 112 +TF ++ S +++L+ KL +KLRS V I ++ V+ S N H N Sbjct: 60 -NHNTFFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLN 118 Query: 113 SS-----FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 ++ + D RF+ LL + S+ Y + I D D + Sbjct: 119 TAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAI 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224 P + D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +PI+ + Sbjct: 179 PPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNS 238 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IG + +A+ R + I +TV ++K S P W Sbjct: 239 NIIGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285 >gi|269958426|ref|YP_003328213.1| aminomethyl transferase family protein [Anaplasma centrale str. Israel] gi|269848255|gb|ACZ48899.1| aminomethyl transferase family protein [Anaplasma centrale str. Israel] Length = 271 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 15/275 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++S ++V G A FL I T DVL + + + IL P+G+ + F + Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAREPIYNLILNPRGRYVFDFFLIPH 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 E++ F+L+ + D+L + L Y+L+ V ++ V N++ Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDAI 119 Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 F D R + + T ++ Y LRI I + D + + FP Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 MD LN ISL KGCYIGQE+V+R+ +K+ + G I G + Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTKTLVCGQEIFAQGQPAGHML 238 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + L + ++K+ G L G +K Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269 >gi|157828633|ref|YP_001494875.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801114|gb|ABV76367.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 335 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38 LSN+ IK+ G ++ FLQ +IT D V ++ + Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64 Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92 + +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146 + V+ S + S + D R++ + G I D + Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWSS 184 Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181 R+ G I+D D + P+ + LN IS Sbjct: 185 HRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV+SR +++ +IR++ IT +DL + IL D+ +IG + KA+ Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKAI 304 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A+ R +K + K +TV G+++ S WY Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335 >gi|115466238|ref|NP_001056718.1| Os06g0134800 [Oryza sativa Japonica Group] gi|55296974|dbj|BAD68449.1| glycine cleavage T protein-like [Oryza sativa Japonica Group] gi|55297200|dbj|BAD68874.1| glycine cleavage T protein-like [Oryza sativa Japonica Group] gi|113594758|dbj|BAF18632.1| Os06g0134800 [Oryza sativa Japonica Group] gi|215686575|dbj|BAG88828.1| unnamed protein product [Oryza sativa Japonica Group] Length = 401 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 98/365 (26%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---------------ILTP 47 + L++++ ++ G A FL++++T D+L R + +LTP Sbjct: 25 ACRLASRAVVRFAGPEAGRFLRSLLTNDLLLSSSSQQRYAPTPNAPARAPPPAYAALLTP 84 Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77 QG+ L + + + +L+ +D ++ D L Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144 Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNS 113 + Y+LRS V I+ Q + W Q +H ++ Sbjct: 145 LACFKRYRLRSKVEIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAESA 204 Query: 114 S---------FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159 + F D R + +D + Y RI +G+ + +T+ Sbjct: 205 AQGNGHGWEWFKDPRLDCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVAEGSTE 264 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212 P + LN IS KGCYIGQE+++R HR +IRKR M + D+ Sbjct: 265 IPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQ 324 Query: 213 LPPSGSPILT--DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKAS 267 GS ++ +IGT+ +G + + + R++ A+K+ +L + VRVKA Sbjct: 325 AVAPGSEVVDKESGKKIGTVNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAI 381 Query: 268 FPHWY 272 P W+ Sbjct: 382 KPDWW 386 >gi|71083326|ref|YP_266045.1| GcvT-like aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062439|gb|AAZ21442.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] Length = 295 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 27/289 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K + + Sbjct: 9 LEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIK-HKSGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111 ++ ++S+ ++L +L YKLRS V I VV ++N+E Sbjct: 68 FIDCEKSQTEALFKQLSVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAGNTIKY 127 Query: 112 --NSSFIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 +S +D R L + + E S I Y++L GI N + L Sbjct: 128 REDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPIAEYYKLSHQLGIPQKNMNELQ 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 + +F + + LNGI KGCY+GQE +RI+ +N + KR + I + I Sbjct: 188 NKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQDDLIYN 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 D EIG + + + A+ I +D + ++K P W Sbjct: 248 GDFEIGKVL-ISNEYPFAL--IKYLDDNFNQENEFKSKNAKLKIKIPSW 293 >gi|91776256|ref|YP_546012.1| glycine cleavage T protein (aminomethyl transferase) [Methylobacillus flagellatus KT] gi|91710243|gb|ABE50171.1| glycine cleavage T protein (aminomethyl transferase) [Methylobacillus flagellatus KT] Length = 334 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 38/283 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ + + G+ A+ FLQ +T DV L I+ S +P+G++L FL ++ Sbjct: 34 ADLSHYGLLSLEGEDAVTFLQGQVTNDVKKLDGNISHYSGYCSPKGRLLALFLAF-AQDG 92 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSFIDE- 118 L+ DR + + +L Y LRS V+I + + G+ + + + S I E Sbjct: 93 RLYLQFDRGLLEPIAKRLRMYVLRSKVVIADRSDDTVRIGIAGNAAEAALNTRFSHIPET 152 Query: 119 ---RFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGIV 154 + S +++ R G + + +D + I GI Sbjct: 153 EYAQVSQDGIIIIRLPGTLPRYELLSPAAQAAELWTALREHLVPADKADWDWREIQAGIP 212 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213 + P +DLLNGIS KGCY GQE+V+R + +++R + D Sbjct: 213 EIVG-ATQEAFVPQMVNLDLLNGISFKKGCYTGQEIVARTHYLGKVKRRTHLAHIAVDAA 271 Query: 214 PPSGSPIL-TDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 P +G I+ D I G + G+ LA R++ V+ Sbjct: 272 PAAGEEIVDADGIAAGQIVRSAPNPTGGQDVLAELRLESVEAG 314 >gi|261330733|emb|CBH13718.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 339 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 54/323 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60 LS+++ ++V G A FLQ + T D+ L + L G+++ + + Sbjct: 5 CLLSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRT 64 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------- 103 + T ++++ D+L++ L Y++R + I VV++ Sbjct: 65 PEGQATIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDSA 124 Query: 104 ------------WNQEHTFSNS---------SFIDERFSIADVLLHRTWGH---NEKIAS 139 +QE + +F D R L + Sbjct: 125 GSSPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLD 184 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + Sbjct: 185 SEKLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLV 244 Query: 200 IRKRPMIITGTDDL---------PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250 RKR + + +L P ++ + ++G + G L + R++ VD Sbjct: 245 TRKRTVPLFLQGELFDGKEGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDIT 304 Query: 251 IKKGMALTV-HGVRVKASFPHWY 272 + L++ G V A P W+ Sbjct: 305 TRSFPGLSLSDGTTVDARIPEWW 327 >gi|73541126|ref|YP_295646.1| glycine cleavage T protein (aminomethyl transferase) [Ralstonia eutropha JMP134] gi|72118539|gb|AAZ60802.1| Glycine cleavage T protein (aminomethyl transferase) [Ralstonia eutropha JMP134] Length = 373 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 117/317 (36%), Gaps = 54/317 (17%) Query: 6 LSNQSF---------IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56 L N+ I+V G A FL +T V L AR + +P+G++ FL Sbjct: 53 LQNRGVVCAPAGLGWIRVAGDDAAAFLHTQLTNAVEDLGPGAARLAGYCSPKGRLQASFL 112 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVV-------------L 102 + + + D +L++ + +L +L + LR+ + P+ VV Sbjct: 113 MWR-DADGIVLQLSDDIQPALQKRLSMFVLRAKAKLSDMSPVVAVVGAAGPQAAQALAKA 171 Query: 103 SWNQEHTFSNSSFIDE----RFSIADVLLH-------------RTWGHNEKIASDIKTYH 145 ++ ++ R A R E +D + Sbjct: 172 GLPAPDAVFGTASVESATVIRLPDAAGQPRWQAVLPAERAGEFRAALSGELADADSAFWD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 L + GI T P +L+ G++ KGCY GQE+V+R Q+R +++R Sbjct: 232 WLDVQSGIPRIVT-ATQEQFVPQMINFELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMW 290 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----K 253 ++ G +P + I + G+VV G LA +ID A+ + Sbjct: 291 LVQGDGAVPAPATEIFRPEDPQQPCGMVVNAAPAPQGGWAGLAELKIDAAASALHLGSAE 350 Query: 254 GMALTVHGVRVKASFPH 270 G ALTV + + P Sbjct: 351 GAALTVGELPYEVPLPE 367 >gi|326483599|gb|EGE07609.1| hypothetical protein TEQG_06523 [Trichophyton equinum CBS 127.97] Length = 395 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 125/335 (37%), Gaps = 68/335 (20%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60 L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I Sbjct: 48 RLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107 Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSW 104 E E +++E+D+ + L+ +KLRS + +G W Sbjct: 108 ETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNTSDW 167 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 ++ F S+ I S A + +R K S Y R+ G+ + + + Sbjct: 168 HENDVFKESNAIICPDSRAPGMGYRKPFLAMKPRSRPIRY--ARMLQGVGEGQIEMPRES 225 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----------- 213 P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + + Sbjct: 226 ALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYESTQAPPTSDIPVY 285 Query: 214 --------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARID-------------- 245 PPSG + G +G LA+ R++ Sbjct: 286 DPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMTDIALTGESTQY 345 Query: 246 KVDHAIKKGMALT-VHGV------RVKASFPHWYK 273 K T V G +VKA P W K Sbjct: 346 DAKQEFKITWDFTEVGGTNIADQPKVKAFVPPWIK 380 >gi|302417320|ref|XP_003006491.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261354093|gb|EEY16521.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 377 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 114/323 (35%), Gaps = 60/323 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-------- 59 ++ I V G FLQ +ITA++ +A LT G+IL I Sbjct: 46 SRRLISVSGPDTAKFLQGVITANIN---APGPLYAAFLTATGRILNDVFIYPDTLAIGAG 102 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEH-------TF 110 E +F++E D + L + YKLR+ + + + V WN T Sbjct: 103 APETSFLIEADADQAPVLAKHIRRYKLRAKFDVRLLDDSDARVWHLWNDAAPDPPAQSTA 162 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 + D R L R + D + Y R G+ + + L P Sbjct: 163 AGDLMPDRRAPGMGYRLVRKGDAAPALDLEQVDEQAYTLRRYLRGVAEGQGEMLREHALP 222 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ +D + GI KGCY+GQE+ R +HR ++RKR + ++ + + D + Sbjct: 223 QESNLDYMGGIEYHKGCYVGQELTIRTKHRGVVRKRILPCVLYNEGDAMPTELAYRDEGV 282 Query: 228 ---------------------GTLGVVVGKKALAIARIDKVDH--------AIKKGMALT 258 G +G LA+ R++ + + + Sbjct: 283 DAGVIPCEAKIESCSKRARNPGKWLSGIGNLGLALCRLETLTDLAGPLPTSSYQPTDEFK 342 Query: 259 VH--------GVRVKASFPHWYK 273 V ++VKA P W + Sbjct: 343 VEWTAGDATNSLKVKAFVPDWLR 365 >gi|326517503|dbj|BAK03670.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 399 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 141/360 (39%), Gaps = 93/360 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------GSA 43 + L++++ ++ G A FL +++T D+L+ + +A Sbjct: 28 ATRLASRAVVRFRGPEAARFLNSLLTNDLLSQGAPASSQPQRYAPTPNAPARAPPPRYAA 87 Query: 44 ILTPQGKILLYFLISKI---------------------EEDTFILEIDRSKRDSLIDKLL 82 +LTPQG+ L + + + + ++D ++ D L+ Sbjct: 88 LLTPQGRFLYDLFLYRPAPRSQMLDRTGSAPQAGEVEGGDGEVLADVDAAEVDELLACFK 147 Query: 83 FYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNSS---- 114 Y+LRS V I+ Q + W Q +H +S+ Sbjct: 148 RYRLRSKVEIDNVSEEFLCWQRFGSDVAHAAPSTQEPEAQSIGWGQGSDHAAESSAQGNG 207 Query: 115 -----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST 164 D R I + +D + Y RI +G+ + +T+ Sbjct: 208 HGWQWLKDPRLDILGYRGIFPADTIPPLVEADKEADERHYLLWRIENGVAEGSTEIPKGE 267 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSG 217 P + + LN IS KGCYIGQE+++R HR +IRKR + + D+ G Sbjct: 268 AIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLLPLKFVDENDQELEQAVAPG 327 Query: 218 SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272 S ++ D ++GT+ +G + + + R++ A+K+ +LT+ VRVKA P W+ Sbjct: 328 SDVVDDASGKKVGTVSTALGSRGMGLLRLE---AALKENASLTISDNRDVRVKAIKPDWW 384 >gi|119713296|gb|ABL97361.1| putative aminomethyltransferase [uncultured marine bacterium HF10_45G01] Length = 296 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 27/291 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++++ + + G+ A FLQ +I+ D+ + + S++LTPQGK L F+I K + + Sbjct: 9 LNDRAILYINGEDAKEFLQNLISNDLNKVSDAYSCFSSLLTPQGKFLYEFIIVK-HKSGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------- 114 +L+ ++ + + L +L YKLRS V I VV +++ E + + Sbjct: 68 LLDCEKPQAEELFTQLSLYKLRSKVEILNLSNEFVVAAFSHEKFLTFDTAKDQSGFTIKY 127 Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 F+D R L + + +++K Y+ L + GIV + + L Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLNLHDANLKEYYSLSHSLGIVPKDLNKLK 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 +F + + LNGI KGCY+GQE +RI+ +N + KR I G I Sbjct: 188 EKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLFPINVISGKLHEGESIYN 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +++EIG + + A+ I ++ + + + P W K Sbjct: 248 NEVEIGKVLIDSDYP-FAL--IKYLNENFDEKANFKTKEASINVNKPDWIK 295 >gi|242094558|ref|XP_002437769.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor] gi|241915992|gb|EER89136.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor] Length = 414 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 134/367 (36%), Gaps = 100/367 (27%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGS--------------- 42 + L++++ ++ G A FL +++T D+ R + Sbjct: 36 ACRLASRAVVRFAGPEAARFLHSLLTNDLLSAFSAAAASAPQRYAPTPNAPARGPAAPAY 95 Query: 43 -AILTPQGKILLYFLISKI-------------------------EEDTFILEIDRSKRDS 76 A+LTPQG+ L + + E + ++D ++ D Sbjct: 96 AALLTPQGRFLYDLFLYRPPPPSQMLDRTGSAPETGEAPEGDTGEPQEVLADVDAAEVDD 155 Query: 77 LIDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQEHTFSNSS 114 L+ Y+LRS V I+ Q + W Q + S Sbjct: 156 LVACFKRYRLRSKVEIDNVSENFACWQRFGHNVVHTEPSTQEPEAQSIGWGQGVDHAGES 215 Query: 115 FI-----------DERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNT 158 D R + +D + Y RI +G+ + +T Sbjct: 216 AAQGNGHGWQWLKDPRLDYLGYRGIFPANTIPPLVESDKEADERHYQLWRIENGVAEGST 275 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------ 212 + P + + LN IS KGCYIGQE+++R HR ++RKR M + D+ Sbjct: 276 EIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVVRKRLMPMKFVDENGQELE 335 Query: 213 --LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVK 265 + GS ++ +IGT+ +G + + + R++ A+K G AL + V+V+ Sbjct: 336 EAVVAPGSEVVDEASGKKIGTVNTALGSRGMGLLRLE---EALKPGSALRISDNRDVKVQ 392 Query: 266 ASFPHWY 272 A P W+ Sbjct: 393 AIKPDWW 399 >gi|15604328|ref|NP_220844.1| hypothetical protein RP464 [Rickettsia prowazekii str. Madrid E] gi|3861020|emb|CAA14920.1| unknown [Rickettsia prowazekii] gi|292572080|gb|ADE29995.1| Putative aminomethyltransferase GcvT-like protein [Rickettsia prowazekii Rp22] Length = 285 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 30/289 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N+ IK+ G ++ FLQ +IT D+ K + +L QG+ L F + +++ Sbjct: 5 LINREIIKIIGLDSLIFLQKLITNDICK---KRYCYTYLLNNQGRYLFDFFVYVHKKEEI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 ++ID+S + +LI L FYKLRS + II+ V+ S + + D R++ Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHKKLDIDMLITVRDPRYTK-- 119 Query: 125 VLLHRTWGHNEKIASDIK-------------------TYHELRINHGIVDPNTDFLPSTI 165 L R+ + S Y E + N I+D D + Sbjct: 120 -LGFRSINKLDITCSSDNMANMESISSITSYCQSMNPIYLEDKYNFAIIDGIEDLITDKS 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTD 223 P+ + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL D Sbjct: 179 IPNMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKVYRITANEDLLSLVQDDVILAD 238 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + +IG + K +A+ ++K H K +TV G+++ S WY Sbjct: 239 NEKIGVICSSYQNKGIALI-MEKKYHDYKT-YNITVKGIKINLSLAPWY 285 >gi|91762244|ref|ZP_01264209.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718046|gb|EAS84696.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] Length = 295 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 27/289 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K + + Sbjct: 9 LEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIK-HKSGY 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111 ++ ++S+ ++L +L YKLRS V I VV ++N+E Sbjct: 68 FIDCEKSQTEALFKQLGVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAGNTIKY 127 Query: 112 --NSSFIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 +S +D R L + + E S I Y++L GI N + L Sbjct: 128 REDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPITEYYKLSHQLGIPQKNMNELQ 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 + +F + + LNGI KGCY+GQE +RI+ +N + KR + I + I Sbjct: 188 NKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQDDLIYN 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 D EIG + + + A+ I +D + ++K P W Sbjct: 248 GDFEIGKVL-ISNEYPFAL--IKYLDDNFNQENEFKSKNAKLKIKIPSW 293 >gi|72393355|ref|XP_847478.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70803508|gb|AAZ13412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 339 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 54/323 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KI 60 LS+++ ++V G A FLQ + T D+ L + L G+++ + + Sbjct: 5 CLLSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRT 64 Query: 61 EED--TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------- 103 E T ++++ D+L++ L Y++R + I VV++ Sbjct: 65 PEGQVTIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNA 124 Query: 104 ------------WNQEHTFSNS---------SFIDERFSIADVLLHRTWGH---NEKIAS 139 +QE + +F D R L + Sbjct: 125 GSSPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLD 184 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + Sbjct: 185 SEKLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLV 244 Query: 200 IRKRPMIITGTDDL---------PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250 RKR + + +L P ++ + ++G + G L + R++ VD Sbjct: 245 TRKRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDIT 304 Query: 251 IKKGMALTV-HGVRVKASFPHWY 272 + L++ G V A P W+ Sbjct: 305 TRSFPGLSLSDGTTVDARIPEWW 327 >gi|226530732|ref|NP_001147280.1| aminomethyltransferase [Zea mays] gi|195609448|gb|ACG26554.1| aminomethyltransferase [Zea mays] Length = 407 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 130/365 (35%), Gaps = 98/365 (26%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGS--------------- 42 + L++++ ++ G A FL +++T D+ R + Sbjct: 31 ACRLASRAVVRFAGPEAARFLHSLLTNDLLSAFSAAGASSPQRYAPTPNAPARGPAAPAY 90 Query: 43 -AILTPQGKILLYFLISKIEE------------------------DTFILEIDRSKRDSL 77 A+LTPQG+ L + + + ++D ++ D L Sbjct: 91 AALLTPQGRFLYDLFLYRPPPRSQMLDRTGSAPETGEAPEGHPHLQEVLADVDAAEVDDL 150 Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQEHTFSNSSF 115 + Y+LRS V I+ Q + W Q + S Sbjct: 151 VACFKRYRLRSKVEIDNVSENFACWQRFGHDVVHTEPSTQEPEAQSIGWGQGVDHAGESA 210 Query: 116 I-----------DERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159 D R + +D + Y RI +G+ + +T+ Sbjct: 211 AQGNDHSWQWLKDPRLDYLGYRGIFPADTIPPLVESDKEADERHYQLWRIENGVAEGSTE 270 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212 P + + LN IS KGCYIGQE+++R HR +IRKR M + D Sbjct: 271 IPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPMKFVDGNGQELEQ 330 Query: 213 LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKAS 267 GS ++ ++G + +G + + + R++ A+K G AL G VRV+A Sbjct: 331 AVAPGSEVVDEASGKKVGAVSTALGSRGMGLLRLE---EALKPGSALRAGGNRDVRVQAI 387 Query: 268 FPHWY 272 P W+ Sbjct: 388 RPDWW 392 >gi|310791527|gb|EFQ27054.1| folate-binding protein YgfZ [Glomerella graminicola M1.001] Length = 404 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 120/344 (34%), Gaps = 76/344 (22%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLISKI-- 60 L ++ I V G A FLQ +IT D+ + + +A L G++L I Sbjct: 54 LPSRRLISVAGPDAAKFLQGVITRDIASKEARARQTGFYAAFLNATGRVLHDVFIYPDLA 113 Query: 61 ------------EEDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQ 106 F++E+D ++ + L + YKLR+ V + V +W+ Sbjct: 114 GLGGDVAAESEQAGTRFLVEVDANEAERLAKHIKRYKLRAKLNVRLLATDEATVWHAWDD 173 Query: 107 -------EHTFSNSSFIDERFSIADVLL---HRTWGHNEKIASDIKTYHELRINHGIVDP 156 + ++ D R L T + A+ +Y R G+ + Sbjct: 174 GGKPMTTDAALLSTVTRDPRTPELGYRLVHGRDTPPPLDLDATTEDSYTIRRYMQGVAEG 233 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--------- 207 + + P + MD +NGI KGCY+GQE+ R +HR ++RKR + Sbjct: 234 QDEIIREHALPQETNMDYMNGIDYHKGCYVGQELTIRTKHRGVVRKRILPCMIYDVDRAT 293 Query: 208 -------------TGTDDLPPSGSPILTD-------DIEIGTLGVVVGKKALAIARIDKV 247 G + LP P T G +G L + R++ + Sbjct: 294 PQTLQYRPEQDANHGPEGLPAETIPRETGIGRAGKRGRSAGKWLKGIGNVGLGLCRLEIM 353 Query: 248 DHAIKKGMA------------LTVHG------VRVKASFPHWYK 273 + G A L G V++KA P W + Sbjct: 354 TDVVLPGEAAASTFDPADEFLLQWGGEDKSNAVKIKAFVPEWLR 397 >gi|254455916|ref|ZP_05069345.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus Pelagibacter sp. HTCC7211] gi|207082918|gb|EDZ60344.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus Pelagibacter sp. HTCC7211] Length = 297 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 27/291 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L +++ + V G+ A FLQ +I+ DV + + +++L+PQGK L F+I K + F Sbjct: 9 LDDRAILYVNGEDAKEFLQNLISNDVNKVSDTNSCFTSLLSPQGKFLFEFIIIK-HKSGF 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--------- 114 I++ ++ + D L +L YKLRS V I VV +++ E TF + Sbjct: 68 IIDCEKPQADGLFKQLSIYKLRSKVEILNLSNEFVVAAFSHEKFLTFDEAQDVPGFTLKY 127 Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 F+D R L + + E S + Y+ GIV + + L Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLELQDSKLHDYYSYCHKLGIVPKDLNKLQ 187 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 + +F + + LNGI KGCY+GQE +RI+ +N + KR + I G I Sbjct: 188 NKLFGIECNYEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPINLVKGELTEGESIYH 247 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + EIG + + A+ + V+ + + + +K P W K Sbjct: 248 KEKEIGKVL-IEKDYPFALIKFQDVN--LSENIDFNTKDASIKIEKPDWIK 295 >gi|171686930|ref|XP_001908406.1| hypothetical protein [Podospora anserina S mat+] gi|170943426|emb|CAP69079.1| unnamed protein product [Podospora anserina S mat+] Length = 425 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 78/325 (24%), Positives = 123/325 (37%), Gaps = 57/325 (17%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------ 58 L ++S I + G A FL+ IIT ++ T P + +A L+ QG+IL I Sbjct: 88 PLPSRSLISLSGPDAAKFLRGIITNELPTTPSTL-TYAAFLSAQGRILNDVFIYLDPRLT 146 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSS-- 114 D+F++E+ + +L+ L YKLRS I + P V+ W + Sbjct: 147 SSPPDSFLIEVSTLEAATLVKHLKRYKLRSKCAIALLPQEEASVIAVWGSPDSIPAQGES 206 Query: 115 ---FIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 D R L G + + Y LR +G+ + + + PH+ Sbjct: 207 LRYCPDPRVPSWQRGLVLGGGSGLEGVQMQSEEVYTLLRYANGVAEGQEEIVRDGGLPHE 266 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---------------TGTDDLP 214 + +DLL G+ KGCY+GQE+ R +HR ++RKR + DL Sbjct: 267 SNLDLLGGVDFRKGCYVGQELTIRTEHRGVVRKRILPAMLYPSSASSPPTSLRYEEGDLA 326 Query: 215 ---PSGSPIL---TDDIEIGTLGVVVGKKALAIARID-------KVDHAIKKGMALTVHG 261 +GS + G G L + R++ + A+ GM Sbjct: 327 GRIQAGSNVTRVGARGRPAGKWLGGRGNLGLVLGRLEMMTDLKLPGEAAVGTGMGFKEGD 386 Query: 262 -------------VRVKASFPHWYK 273 VRVKA P W + Sbjct: 387 EFEVEVKGEEGEKVRVKAFVPGWLR 411 >gi|116191917|ref|XP_001221771.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51] gi|121786583|sp|Q2H6N9|CAF17_CHAGB RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|88181589|gb|EAQ89057.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51] Length = 437 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 128/362 (35%), Gaps = 92/362 (25%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVL-----------TLPYKIARGSAILTPQGKIL 52 LS++ I V G A +LQ +ITA++ L +A LT QG+IL Sbjct: 67 AELSSRKLISVSGPDAAKYLQGVITANLTPGYAGPNPTSEHLRSDAGFYAAFLTAQGRIL 126 Query: 53 LYFLISKIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103 I + DT +++E+D ++ D L + YKLR+ V + + V + Sbjct: 127 HDVFIYRDVRDTTHPAGHSWLVEVDAAEADRLQKHIKRYKLRAKFDVRLLNEGEGRVWHA 186 Query: 104 WNQEHTFS-----------NSSFIDERFSIADVLLHRTWGHNEKIAS------DIKTYHE 146 W+ + S + + I A L HR + S Y Sbjct: 187 WDDANPSSLTTTQPSFPSSSPTIITTPDHRAPNLGHRLLTFSTPTPSLPLPTLPETAYRL 246 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 R HGI + + L +T PH++ +D + KGCY+GQE+ R +HR ++RKR + Sbjct: 247 RRYRHGIAEGQAELLYNTALPHESNLDATGAVDFRKGCYVGQELTIRTEHRGVVRKRVLP 306 Query: 207 IT-----------------------------GTDDLPPSGSPILTDDIE---IGTLGVVV 234 T ++ P+ + I + G V Sbjct: 307 CVLYPDGQAEGGGVVVVPGEVGFRSDVGAEGVTAEMVPAEASIGRVGKKGRSAGKWLSGV 366 Query: 235 GKKALAIARI----DKVDHAIKKGMALTVHG-------------------VRVKASFPHW 271 G LA+ R+ D V G VR+KA P W Sbjct: 367 GNLGLALCRLEIMTDVVLPGETGGTGFVEGDEFVVGLGGGSGEEGGEGKKVRIKAFVPDW 426 Query: 272 YK 273 + Sbjct: 427 LR 428 >gi|253996915|ref|YP_003048979.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8] gi|253983594|gb|ACT48452.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8] Length = 335 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 38/302 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ +++ G A FLQ +T DV L + A +A TP+G++L FL + + Sbjct: 33 CDLSHLGLLQLSGADAFTFLQGQVTNDVNQLKGETAHYTAYCTPKGRMLALFLAF-AQHE 91 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID---- 117 L++ + +L Y +RS V ++ I + LS + ++ F + Sbjct: 92 RIHLQMPLELVAATAKRLKMYVMRSKVEVQDTSHDIIKIGLSGPNANALLSTQFAEIPQH 151 Query: 118 --------------------ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGI 153 RF I + H + + ++ + L I G+ Sbjct: 152 DYELVTLDNGSLLKLPGSTHARFEIFTDINHAPAIWSALSAQASVANADYWEWLEIQAGV 211 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D + P +DLL+GI+ KGCY GQE+V+R + I++R + Sbjct: 212 PDVKPE-TQEEFVPQMLNLDLLSGINFKKGCYTGQEIVARTHYLGSIKRRTYLAHVAQAT 270 Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA-S 267 + + T + +G + G LA R +++ + + LT G + + Sbjct: 271 AAGENILNTANDPVGKVVRSAPAPQGGYDILAEIRCAEINLENTEAIQLTASGHTLTLKT 330 Query: 268 FP 269 P Sbjct: 331 LP 332 >gi|326500300|dbj|BAK06239.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 399 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 141/360 (39%), Gaps = 93/360 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------GSA 43 + L++++ ++ G A FL +++T D+L+ + +A Sbjct: 28 ATRLASRAVVRFRGPEAARFLNSLLTNDLLSQGAPASSQPQRYAPTPNAPARAPPPRYAA 87 Query: 44 ILTPQGKILLYFLISKI---------------------EEDTFILEIDRSKRDSLIDKLL 82 +LTPQG+ L + + + + ++D ++ D L+ Sbjct: 88 LLTPQGRFLYDLFLYRPAPRSQMLDRTGSAPQAGEVEGGDGEVLADVDAAEVDELLACFK 147 Query: 83 FYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNSS---- 114 Y+LRS V I+ Q + W Q +H +S+ Sbjct: 148 GYRLRSKVEIDNVSEEFLCWQRFGSDVAHAAPSTQEPEAQSIGWGQGSDHAAESSAQGNG 207 Query: 115 -----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST 164 D R I + +D + Y RI +G+ + +T+ Sbjct: 208 HGWQWLKDPRLDILGYRGIFPADTIPPLVEADKEADERHYLLWRIENGVAEGSTEIPKGE 267 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSG 217 P + + LN IS KGCYIGQE+++R HR +IRKR + + D+ G Sbjct: 268 AIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLLPLKFVDENDQELEQAVAPG 327 Query: 218 SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272 S ++ D ++GT+ +G + + + R++ A+K+ +LT+ VRVKA P W+ Sbjct: 328 SDVVDDASGKKVGTVSTALGSRGMGLLRLE---AALKENASLTISDNRDVRVKAIKPDWW 384 >gi|114320486|ref|YP_742169.1| glycine cleavage T protein (aminomethyl transferase) [Alkalilimnicola ehrlichii MLHE-1] gi|114226880|gb|ABI56679.1| glycine cleavage T protein (aminomethyl transferase) [Alkalilimnicola ehrlichii MLHE-1] Length = 328 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 118/302 (39%), Gaps = 35/302 (11%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L I V G A FL + +T D+ +P R + P+G++L F + + + Sbjct: 24 LTPLPEAGVIAVEGPDATTFLHSQLTHDIEGMPEGSWRLAGWCNPKGRLLALFRVVRDGD 83 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------NSSFI 116 +F L ++ +L + LR+ V ++ + ++L E N++ Sbjct: 84 QSFRLLCPGELVTGVMRRLQMFILRARVTLDDRSGEQLLLGLYGEEALDAATRELNTTLP 143 Query: 117 DERFSI--------------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + D + + D + + L+I G + Sbjct: 144 EPSGTTHTHGATLLALAADRALLIAGPDRMKRLWLALHHLPVGDPQHWRLLQIRAGEPEI 203 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P A +D+++G+S KGCY GQEVV+R+ + ++KR I+GT P Sbjct: 204 FQD-SQDLFIPQMANLDVIDGLSFRKGCYPGQEVVARMHYLGRLKKRMFPISGTGLPPRP 262 Query: 217 GSPILT-DDIEIGTLGVVVGK-----KALAIARIDKVD--HAIKKGMALTVHGVRVKASF 268 G+ + D +G + V LA+ +D + A+ +G +TV + A Sbjct: 263 GTEVRDPADKRLGQVVVAESDGEDSFAGLAVLPLDHAEYGAALIEGKPITVGPLPEAAHP 322 Query: 269 PH 270 P Sbjct: 323 PS 324 >gi|189184098|ref|YP_001937883.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda] gi|189180869|dbj|BAG40649.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 18/287 (6%) Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 M S +L +N++ +++ G A FL I T V+ A+ S IL+PQG+ L F + Sbjct: 1 MHSYHLLNNRAILELSGCDASNFLLRITTN-VIPAANGEAKYSMILSPQGRFLFDFFLIN 59 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSN 112 +TF ++ S +++L+ KL +KLRS V I ++ ++ S N H N Sbjct: 60 -NHNTFFIDCLASIKNALLSKLHIFKLRSKVQINDVSDFYDIIYSQFYINDSNLHHLNLN 118 Query: 113 SS-----FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 ++ + D RF+ LL + S+ Y + I D D + Sbjct: 119 TAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAI 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224 P + D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +P++ + Sbjct: 179 PPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPVMHNS 238 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 IG + +A+ R + I +TV ++K S P W Sbjct: 239 NIIGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285 >gi|89071053|ref|ZP_01158264.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] gi|89043384|gb|EAR49603.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] Length = 243 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 13/251 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+++ ++ G + FL ++T +V P R +A+LTPQGK + F + E + Sbjct: 1 MSDRTIFELTGSDRVKFLDNLVTNNV-PAPGDGLRYAALLTPQGKYIADFFLL-AEPERL 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +++ +L +L Y+LR++V + + +F D R Sbjct: 59 LIDAPAVVAPALAQRLSMYRLRADVALAEIDL----AVRRGTGPAPEGAFADPRHP---A 111 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 L R +G D + LR+ H + + + + + + LNG+ KGCY Sbjct: 112 LGWRLYGTGA--GDDGTDFDALRVEHVVPEAGREL-DGDSYVLEMGFERLNGVDFRKGCY 168 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQEV +R++H+ +RK + G+ I++D G L V + LA R D Sbjct: 169 VGQEVTARMKHKTDLRKGLARVRLEG-AAEPGTEIVSDGRSAGILHTVCASRGLAYVRYD 227 Query: 246 KVDHAIKKGMA 256 + + G A Sbjct: 228 RATGRMTAGDA 238 >gi|320592852|gb|EFX05261.1| aminomethyltransferase [Grosmannia clavigera kw1407] Length = 409 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 124/351 (35%), Gaps = 81/351 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59 L+++ I V G A FLQ IITA+++ AR SA L QG++L + + Sbjct: 52 ARLASRRLISVAGPDAAKFLQGIITANMVPAAGASARPHGFYSAFLNSQGRVLHDVFVYR 111 Query: 60 IE--------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHT 109 + F++E+D + +L + Y+LR+ V +++ + V +W + Sbjct: 112 NTLSRPAVEIDPAFLVEVDAEQARTLEKHMRRYRLRAKVDVQLLDDDELAVWHAWGEGAA 171 Query: 110 FSNSSFI-----------DERFSIADVL-LHRTWGHNEKIA-----SDIKTYHELRINHG 152 + ++ D R + + G +A D Y R G Sbjct: 172 SAAAAAAATASPDVITVCDTRAPGLGWRHVAASSGLPPPLALAVDAVDEFAYRIRRYLWG 231 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P P ++ +DL+ GI KGCY+GQE+ R +HR ++RKR + D Sbjct: 232 VAEGQREIQPGQALPLESNIDLMGGIDFHKGCYVGQELTIRTRHRGVVRKRVLPCVLYPD 291 Query: 213 LPPSGSPILTD------------------------DIEIGTLGVVVGKKALAIARIDKVD 248 P D G +G LA+ R++ + Sbjct: 292 AENVDVPTQLDYAPHDISRDLAIPPETSIGRVGKKGRSAGKWLAGIGNVGLALCRLEPMT 351 Query: 249 H--------------------------AIKKGMALTVHGVRVKASFPHWYK 273 +G VR++A P W + Sbjct: 352 DIVLPDEAAATAAAAASSTPGTFVMAWPADEGTDQAASSVRIRAFVPEWLR 402 >gi|94496221|ref|ZP_01302799.1| aminomethyl transferase [Sphingomonas sp. SKA58] gi|94424400|gb|EAT09423.1| aminomethyl transferase [Sphingomonas sp. SKA58] Length = 273 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 6/207 (2%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DVLTL R + +LTPQGK L ++ + Sbjct: 25 MTGTTLTDRALLRISGEEARAFLQGLLTRDVLTLQPGHPRWTGLLTPQGKALFDVILWED 84 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++ + S+ D L +L Y+LR V I + + W+ + D R Sbjct: 85 GGD-VLIDCEASQADMLAKRLTLYRLRRKVTI--AREEALAVHWSPDAADQPH---DPRL 138 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + + R++ G+ + + + + L G+ Sbjct: 139 PALGHRWLASADDQTGEGDAAAAFRTHRLSLGVFEGVEELGQDQVLWLETNAQELGGVDY 198 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207 KGCY+GQE +R+ +RN + +R + + Sbjct: 199 DKGCYVGQENTARMHYRNKVSRRLVAV 225 >gi|114331277|ref|YP_747499.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas eutropha C91] gi|114308291|gb|ABI59534.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas eutropha C91] Length = 356 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 117/316 (37%), Gaps = 51/316 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IE 61 + LS+ I+ G+ FLQ ++ DV T A TP+G++L FL+ + I Sbjct: 40 LIDLSHLGLIRFSGEETQKFLQGQLSCDVHTTDSGKATYGGYCTPKGRLLSSFLLWQNIS 99 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDER 119 + ++++++ +++ +L + LR+ VII+ + + ++ HT ++ Sbjct: 100 DYSYLMQLPAELTETIAKRLKMFVLRAKVIIQDHTEDCIRIGVAGKNAHTLLQNTLAGTV 159 Query: 120 FSIADVLLHRTWG---------------------------HNEKIASDIKTYHELRINHG 152 + + ++ + + L I G Sbjct: 160 LPTQPLAITAIPDGQVICHSENRFEILISPAHALSLWERLSSQARCAGAAAWDWLEIQEG 219 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P +D + G++ KGCY GQE+V+R Q+ +++R D Sbjct: 220 VP-AIFKATQEQFIPQMINLDAIGGVNFKKGCYPGQEIVARTQYLGKVKRRMYRAHLDSD 278 Query: 213 LP---PSGSPILTDDIEIGTLGVVV----------GKKALAIARIDKVDHA-----IKKG 254 P +G + + D G++V G LA+ ++ ++ G Sbjct: 279 SPLEITAGDNLFSADTGGQACGMIVNAAPAPAPAKGVDVLAVIQVSSIEANPIHCKTPDG 338 Query: 255 MALTVHGVRVKASFPH 270 LT+ + S P Sbjct: 339 PQLTIQSLPY--SIPD 352 >gi|294084896|ref|YP_003551656.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664471|gb|ADE39572.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 339 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 15/282 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++ + FI + G A+ FLQ+IITA+V TL R A+LTPQG++L+ F+I + +D Sbjct: 47 AHMPDMGFIAIAGIEAVDFLQSIITANVETLDSGAMRQGALLTPQGRVLIDFMIYRTSQD 106 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDERFS 121 +L+ + ++RD L +L Y+LR V IE + + WN + ++ F D R Sbjct: 107 ELLLQCEANRRDDLYTRLRRYRLRRPVTIETRDDLACYVWWNLDIVPASMPHLFADRRDG 166 Query: 122 IADVL-----LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 + + I +H +RI I D P ++ +D L+ Sbjct: 167 ALGYRYLGNDAQTVLSDHGATSGTIDEWHAIRIAKAIPQGALDLTPERALMLESGLDHLD 226 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-- 234 + KGCYIGQEV +R +R ++++R D +P + I+ DD IG + Sbjct: 227 AVDFGKGCYIGQEVTARTHYRGLVKRRLAPFM-IDAMPEPSADIMLDDAVIGRCKSIAPL 285 Query: 235 ---GKKALAIARIDKVDHAIKKGM--ALTVHGVRVKASFPHW 271 G L + ++ + G +LT+ + + P W Sbjct: 286 PGGGAITLGLVKLSDLHMLQDSGQNPSLTIDSHVAQLALPDW 327 >gi|99034332|ref|ZP_01314366.1| hypothetical protein Wendoof_01000832 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 239 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 10/242 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDNRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114 + T +LE + +I+KL K LR + ++ + V + +N + +S Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 F D R + + + E + D Y ++RI + + D D + ++ FP L+D Sbjct: 119 FQDPRHKLLGMRIIHKDEMKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDK 177 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233 +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L Sbjct: 178 VNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSS 237 Query: 234 VG 235 V Sbjct: 238 VD 239 >gi|303314493|ref|XP_003067255.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106923|gb|EER25110.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1262 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA----RGSAILTPQGKILLYFLISK 59 V L N++ I + G + FLQ +IT +V++ + + + L QG++L I Sbjct: 881 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 940 Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107 + +++E+D+ + +L+ L +KLR+ + GV W+ Sbjct: 941 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 1000 Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + D R +A L + + TY RI Sbjct: 1001 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRIL 1060 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + + Sbjct: 1061 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 1120 Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243 + LP +G+ I G +G LA+ R Sbjct: 1121 NTEDPKPMPSSLRIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISGIGNVGLALCR 1180 Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 ++ + G+A V+V A P W K Sbjct: 1181 LETMTDISITGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 1231 >gi|169613713|ref|XP_001800273.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15] gi|121935220|sp|Q0UE25|CAF17_PHANO RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|111061204|gb|EAT82324.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15] Length = 406 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 119/326 (36%), Gaps = 60/326 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 L ++S I + G +A FL +IT D + +A L +G+++ I Sbjct: 57 APLPHRSLIFLSGPTASKFLHGLITHDATRVSP---FYAAFLDARGRVICDVFIWVWPEL 113 Query: 59 --KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTF- 110 + +E+D + ++L+ L +KLR + I P G V +W H Sbjct: 114 IAQQGHWACYIEVDAGQANALMLHLKRHKLRHKLTISHVPAEGRDGIKVWAAWGDAHKQV 173 Query: 111 ----SNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + D R L R + D K Y R HG+ + + + P Sbjct: 174 KDWGEIAGLQDPRAPGMYRYLANADRETIARDMQPVDTKFYDIQRYIHGVPEGSAEMPPY 233 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------------- 210 + P +A +DL +GI KGCYIGQE+ R +H ++RKR + + Sbjct: 234 STLPMEANIDLSSGIDFKKGCYIGQELTIRTKHTGVVRKRILPVRFHAGGAGAADPQAPV 293 Query: 211 ----DDLPPSGSPI--------LTDDIEIGTLGVVVGKKALAIARIDKV----------- 247 P G I L+ G + +G LA RI+ + Sbjct: 294 NPSFAPQPQPGMDIRTLDDTGALSKGRPTGRIVAAIGNVGLATCRIENMTSMRVSTEGGF 353 Query: 248 -DHAIKKGMALTVHGVRVKASFPHWY 272 + G+ + VRV+ W+ Sbjct: 354 YKEGTQFGVDVDGQVVRVEPVVHDWF 379 >gi|67515557|ref|XP_657664.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4] gi|40746082|gb|EAA65238.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4] Length = 1243 Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 94/365 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR------GSAILTPQGKILLYFL 56 L+N+ I + G + FLQ ++T ++ R +A L G+IL Sbjct: 844 YARLTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAF 903 Query: 57 IS---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFS 111 I + +E +++E+D+ + L+ L +KLR+ + + V SW Sbjct: 904 IYPLTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPR 963 Query: 112 NSSF-------------------IDERFSIADVLLH-------RTWGHNEKI-------- 137 +++ +D R L RT+ E Sbjct: 964 WAAYNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGE 1023 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR Sbjct: 1024 EVDLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHR 1083 Query: 198 NIIRKRPMIITGTDD---------------------LPPSGSPI----LTDDIEIGTLGV 232 ++RKR + + +D LPP+GS I G Sbjct: 1084 GVVRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLG 1143 Query: 233 VVGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASF 268 +G LA+ R++ + D + G L V+VKA Sbjct: 1144 GIGNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIV 1203 Query: 269 PHWYK 273 P W + Sbjct: 1204 PTWTR 1208 >gi|115959466|ref|XP_001183295.1| PREDICTED: similar to GA20785-PA [Strongylocentrotus purpuratus] Length = 277 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 21/232 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57 ++ L+ +S + V G+ A LQ ++T DV L + S L QG++L + Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79 Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110 + +D +++LE D + L L Y++R V I + V ++ T Sbjct: 80 YQWSKDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139 Query: 111 SNSS---------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTD 159 S F D R + G + + Y R G+ + + Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAG 251 >gi|115717980|ref|XP_799220.2| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus purpuratus] Length = 251 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 21/232 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57 ++ L+ +S + V G+ A LQ ++T DV L + S L QG++L + Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79 Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110 + +D +++LE D + L L Y++R V I + V ++ T Sbjct: 80 YQWSKDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139 Query: 111 SNSS---------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTD 159 S F D R + G + + Y R G+ + + Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAG 251 >gi|148259282|ref|YP_001233409.1| glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum JF-5] gi|326402437|ref|YP_004282518.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301] gi|146400963|gb|ABQ29490.1| Glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum JF-5] gi|325049298|dbj|BAJ79636.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301] Length = 275 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 13/272 (4%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + YL + I + G + FLQ +++ DV A SA+LTPQG+ L F I + Sbjct: 6 TIAYLPARGVIGIEGPDRVAFLQGLVSNDVTKAEPGRAVWSALLTPQGRYLAEFFIL-TD 64 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNS-SFIDER 119 ++ +L+ LI +L ++LRS V + V +W + + D R Sbjct: 65 GESLLLDAPGVAVPDLIRRLSRFRLRSQVALRDRSDEFAVHAAWGGAPSAPGAIVAADPR 124 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 A L A+D Y R+ G+ D + D P +A L+GI Sbjct: 125 LPAAGHRL--LAPAPLAGAADETAYRAHRLALGLPDHD-DLEPEKTLLMEAGFGDLHGID 181 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQE+ +R ++R ++++R + + DLP +G+ I + E+GTL +G++ L Sbjct: 182 WDKGCYMGQELTARTRYRGLVKRRLVPVDAEADLPAAGA-ITAGEREVGTLRTSLGRRGL 240 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 A + L++ G+ + P W Sbjct: 241 A------LLRLDALDARLSLDGIALTPDIPSW 266 >gi|19115416|ref|NP_594504.1| iron-sulphur cluster biogenesis protein (predicted) [Schizosaccharomyces pombe 972h-] gi|1351677|sp|Q09929|CAF17_SCHPO RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|1067223|emb|CAA91966.1| iron-sulphur cluster biogenesis protein (predicted) [Schizosaccharomyces pombe] Length = 325 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 40/296 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60 S++S I+V G A+ FLQ + T + + L QG++L I Sbjct: 27 SSKSLIRVEGVDAVKFLQGLTTNKITL---DNPVYTGFLNTQGRVLFDSFIYPKVSNNGT 83 Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTFSNS 113 D +EID+ + L Y LRS I P V+ +E ++ Sbjct: 84 ENERSDELYVEIDKVAESDFLKHLKKYNLRSRCSIAKIPSEELSIKVIWDVKEESRLKDT 143 Query: 114 SF--IDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 D RFS +L + T + + Y R +GI + + +PS FP + Sbjct: 144 VAYAKDPRFSKQRLLRMIVPTSTCTSSSSGSLDDYKVFRYRNGIPEGPQEIIPSISFPLE 203 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---------DLPPSGSPI 220 + MD + GI KGCY+GQE+ R + + RKR + + S + Sbjct: 204 SNMDWMKGIDFHKGCYLGQELTVRTYYTGVTRKRIFPFIIPNYEDNPSQVIEPSAPLSIV 263 Query: 221 LTDDIEI-----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + G + ++GK LA+ R+ + L +G+ ++ + W Sbjct: 264 AKQGEPVSRRSPGKIIAILGKVGLALVRLQYLK------SDLACNGIPIQLNTSIW 313 >gi|300311915|ref|YP_003776007.1| glycine cleavage system protein T [Herbaspirillum seropedicae SmR1] gi|300074700|gb|ADJ64099.1| glycine cleavage T (aminomethyltransferase) protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 110/310 (35%), Gaps = 45/310 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++ I V G+ A FL +T DV L AR + +P+G++L FL+ + ++ Sbjct: 53 APLTSLGLIAVTGEDAASFLHGQLTNDVQHLDTGSARLAGYCSPKGRLLATFLMWRDDQA 112 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 + L++ RS + ++ +L + +R+ + VL T + + Sbjct: 113 S-WLQLPRSLQPAIQKRLQMFVMRAKAKLADASTERGVLGLAGPATANALAEWFPVLPAA 171 Query: 119 -------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHG 152 R + A W + + I G Sbjct: 172 PYDKIDNSHGTLIRLADAAGSPRYQWIAAIDTLTAAWPRLAQHLTPTASLAWRLSEIRAG 231 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P +L+ G++ KGCY GQE+V+R Q+ +++R M+ T Sbjct: 232 VP-GIVAATQEQFVPQMINFELIGGVNFKKGCYPGQEIVARSQYLGKLKRRTMLATIDSA 290 Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIARI------DKVDHAIKKGMALTVH 260 +G + G+VV ALA+ + D V G AL H Sbjct: 291 AARAGQEVFAAADPGQPCGMVVNAEALDDGHALALVEMKLAAAEDAVHLGAADGPALHFH 350 Query: 261 GVRVKASFPH 270 + + + P Sbjct: 351 ALPYELADPQ 360 >gi|304387443|ref|ZP_07369634.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|304338536|gb|EFM04655.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] Length = 304 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 103/272 (37%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFID 117 D +L + + ++ I +L + LR+ V+ EI V + + S + Sbjct: 77 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVF 135 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D VL HR H A+ + I G T Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 194 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAVEAGTLLTADGE 253 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 254 EAGIVLDSVQDSENFTALAVIKFSAAQKELAA 285 >gi|320037549|gb|EFW19486.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 425 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59 V L N++ I + G + FLQ +IT +V++ + + + L QG++L I Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103 Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107 + +++E+D+ + +L+ L +KLR+ + GV W+ Sbjct: 104 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 163 Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + D R +A L + + TY RI Sbjct: 164 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRIL 223 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + + Sbjct: 224 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 283 Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243 + LP +G+ I G +G LA+ R Sbjct: 284 NTEDPKPMPSSLRIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISGIGNVGLALCR 343 Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 ++ + G+A V+V A P W K Sbjct: 344 LETMTDISITGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 394 >gi|119174726|ref|XP_001239704.1| hypothetical protein CIMG_09325 [Coccidioides immitis RS] gi|121752688|sp|Q1DK38|CAF17_COCIM RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor Length = 425 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59 V L N++ I + G + FLQ +IT +V++ + + + L QG++L I Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103 Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107 + +++E+D+ + +L+ L +KLR+ + GV W+ Sbjct: 104 TLPEENGGNEGMELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNA 163 Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + D R +A L + + TY RI Sbjct: 164 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLSQPLPGQQASLSTYTLRRIL 223 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + + Sbjct: 224 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 283 Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243 + LP +G+ I G +G LA+ R Sbjct: 284 NTEDPKPMPSSSGIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISRIGNVGLALCR 343 Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273 ++ + G+A V+V A P W K Sbjct: 344 LETMTDISLTGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 394 >gi|288575997|ref|ZP_05977979.2| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996] gi|288566522|gb|EFC88082.1| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996] Length = 285 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 21/267 (7%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L S I+V G+ FL ++ D+ LP A + TP+G++L ++ ED Sbjct: 4 RLPFFSVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRVLANMIVLNRGED- 62 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------EHTF 110 +L + +S++ +L + LR+ V P VV ++ E Sbjct: 63 LLLVMAADLAESIVKRLRMFVLRAKVEFTPLPDFAVVGMLDESCHATPPDSPNLSFEALL 122 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 N + + + E A ++ I G + T Sbjct: 123 DNGVYTIPLPHKGRLKIGEVAQLPEYDAQAENAWNLHEIRSGYP-WISAATKETAVAQML 181 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 ++ G+ KGCY GQE+++R Q+R +++ +++G D L +G ++++D E G + Sbjct: 182 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGVGVVSEDAEAGQI 240 Query: 231 ----GVVVGKKALAIARIDKVDHAIKK 253 G +LA+ + + Sbjct: 241 INTALTENGSLSLAVIKFSAAQSPLTD 267 >gi|121604847|ref|YP_982176.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas naphthalenivorans CJ2] gi|120593816|gb|ABM37255.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas naphthalenivorans CJ2] Length = 317 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 21/249 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L++ I+ G+ A+ FLQ+ +T DV + A +A +G++ F++ K ++ Sbjct: 14 VQLTHLGLIRAAGEDAVKFLQSQLTQDVALMDLTQAHLAAFCNAKGRMQASFILFKRSQE 73 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L R + + +L + +R+ + + S + ++ A Sbjct: 74 EVLLVCSRDILAATLKRLSMFVMRAKAKLSDASDEFSLYGVAGSAIESMAGSTRPAWTKA 133 Query: 124 DV------LLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPST 164 D+ L+ G + D++T++ L + GI T + Sbjct: 134 DIGDANMVFLYPGAGQLRALWCAPAASPAPQAAGIDLETWNWLEVQSGIA-MITQPIFEA 192 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + + G++ KGCY GQE+V+R Q+R +++R ++ D P G + Sbjct: 193 FVPQMLNYESVGGVNFKKGCYPGQEIVARSQYRGTLKRRACLVHA-DAAPAVGQEVFHIK 251 Query: 225 IEIGTLGVV 233 G+V Sbjct: 252 DAEQPCGLV 260 >gi|330814289|ref|YP_004358528.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Candidatus Pelagibacter sp. IMCC9063] gi|327487384|gb|AEA81789.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Candidatus Pelagibacter sp. IMCC9063] Length = 298 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 26/292 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +++L ++ I + G +PFLQ+II+ D+ + K + S +LTPQGK L F+I+K Sbjct: 6 AIHLEQKTVISINGSDVVPFLQSIISNDIQLVDEKTSIYSCLLTPQGKFLYDFIITKKSS 65 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-------- 114 D ++L+ ++ D I KL YKLRS + I V L +N + S Sbjct: 66 DHYLLQCNKLIVDDFIAKLTVYKLRSQIQISKVDQEYVSLFFNMANEIIASKFNTIQGFT 125 Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIVDPNTD 159 F D R + V + + + + TY ++ G+VD + Sbjct: 126 IQNQYGFFFNDPRLADLGVHGIILKDKFDDLVKELNVNLLPLDTYVKICHQVGLVDLVPE 185 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 S F + + LNG+S KGC++GQE +R+ +N IRKR I G P Sbjct: 186 LALSNYFSLELNLKELNGVSFKKGCFVGQENTARMNLKNKIRKRVFPIQIIQGSVEIGQP 245 Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 I ++ IG + + I ++ H + + ++L +K P+W Sbjct: 246 IKDNEKTIGKIIS-LDPACFGILDAEESKHLLDQTISL--EQSSIKILKPYW 294 >gi|253998575|ref|YP_003050638.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4] gi|253985254|gb|ACT50111.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4] Length = 344 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 34/295 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ ++V G+ I FLQ +T D+ L + + T +G++L FL + Sbjct: 40 ADLSHLGLLQVDGEDTITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQG- 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------------------EIQPIN 98 L+++ + ++ +L Y LRS V+I E P Sbjct: 99 HIHLQLNGRLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTE 158 Query: 99 GVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIV 154 +S + T RF I A W E+ + + L I GI Sbjct: 159 VHGISTQENATLIRLPGALPRFEIFTAQENAQELWQELEQHFDPVGQTGWDWLEIEAGIP 218 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD 212 + P +D L GI+ KGCY GQE+V+R + +++R +I +T TD Sbjct: 219 EIFP-ATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATDS 277 Query: 213 LPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LP G + + E +G + G + + ++ G +T G+ + Sbjct: 278 LPQPGDEVFAGEGEAVGQVVRSSGIAGVESRVLIELRQEASLGKTVTWQGLPIDL 332 >gi|259489751|tpe|CBF90281.1| TPA: aminomethyl transferase, putative (AFU_orthologue; AFUA_5G12430) [Aspergillus nidulans FGSC A4] Length = 438 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 94/365 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR------GSAILTPQGKILLYFL 56 L+N+ I + G + FLQ ++T ++ R +A L G+IL Sbjct: 39 YARLTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAF 98 Query: 57 IS---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFS 111 I + +E +++E+D+ + L+ L +KLR+ + + V SW Sbjct: 99 IYPLTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPR 158 Query: 112 NSSF-------------------IDERFSIADVLLH-------RTWGHNEKI-------- 137 +++ +D R L RT+ E Sbjct: 159 WAAYNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGE 218 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR Sbjct: 219 EVDLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHR 278 Query: 198 NIIRKRPMIITGTDD---------------------LPPSGSPI----LTDDIEIGTLGV 232 ++RKR + + +D LPP+GS I G Sbjct: 279 GVVRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLG 338 Query: 233 VVGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASF 268 +G LA+ R++ + D + G L V+VKA Sbjct: 339 GIGNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIV 398 Query: 269 PHWYK 273 P W + Sbjct: 399 PTWTR 403 >gi|157870281|ref|XP_001683691.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126757|emb|CAJ05212.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 368 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 122/350 (34%), Gaps = 84/350 (24%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 L ++ ++V G A FLQ I T D+ L + L G++L + Sbjct: 9 CRLPSRRILRVRGTDAHDFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------- 111 + + ++++ L+D L K+R V I+ VVL+ +E + Sbjct: 69 HEGQASILVDVHERSATELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSADAQRSRDS 128 Query: 112 -----------------------NSSFIDER------------------------FSIAD 124 F+D R F + Sbjct: 129 ASGCDARESSVTSLSPETLEERHTECFLDPRNDALFPRPPPPSSSSPPAAVTSPSFCLRK 188 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 ++ TW S +Y L + GI + F + P + +D L G+S KGC Sbjct: 189 CVVPATWA---PPLSSPDSYTTLLYSRGIGEGPDVFKCNKSLPFEGNLDFLKGVSFHKGC 245 Query: 185 YIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDD------------------- 224 Y+GQE+ R + RKR + + G ++ P + I+TD+ Sbjct: 246 YVGQELTHRTHVMLVTRKRTVPLHFGPANVDPPAAGIITDEGAVTKTWPVEVGEPLYSAA 305 Query: 225 -IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272 +IG + V G+ + + R+ VD A L + G V+ P W+ Sbjct: 306 REKIGEVTGVCGQVGIGLFRLRYVDKATHTVPGLQLKDGTPVQTHLPDWW 355 >gi|94310768|ref|YP_583978.1| glycine cleavage T protein (aminomethyl transferase) [Cupriavidus metallidurans CH34] gi|93354620|gb|ABF08709.1| putative glycine cleavage T protein (aminomethyl transferase) [Cupriavidus metallidurans CH34] Length = 336 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 119/305 (39%), Gaps = 47/305 (15%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V G A FL + +T V L AR + +P+G+++ FL+ + + D +L+ Sbjct: 28 LGLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWR-DADGIVLQ 86 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WNQEHTF 110 + + + +L + LR+ + +L T Sbjct: 87 LSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQQAGLPTPQAPLATA 146 Query: 111 SNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 S+ + R + AD L ++ G +AS + L + GI Sbjct: 147 SDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVASP-AFWDWLDVASGIPRI 205 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P +L+ G++ KGCY GQEVV+R Q+R +++R + GT D+P + Sbjct: 206 AA-ATQEQFVPQMINFELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGDVPAA 264 Query: 217 GSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----KGMALTVHGVRV 264 + I + G++V G + LA +ID + A+ G A++ + Sbjct: 265 AAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAASGPAVSTGALPY 324 Query: 265 KASFP 269 + P Sbjct: 325 EVPLP 329 >gi|170571134|ref|XP_001891614.1| aminomethyltransferase [Brugia malayi] gi|158603797|gb|EDP39585.1| aminomethyltransferase, putative [Brugia malayi] Length = 275 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 12/267 (4%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L ++ ++ GK FLQA++T D+ L A+ + +L +G+I+ ++ + + D Sbjct: 9 LRHRGLLRAKGKEVFQFLQALVTNDIRRLVDGQAQYALLLNNRGRIVEDLILYR-QADEI 67 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++E DRS + L +K+ +V IE + + T D R Sbjct: 68 LIESDRSNQLKLRKLFEMFKIHKDVTIE--EVTERYVYHADSATNBIPGIQDPRVPSFGK 125 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + +++ D Y E R + GI + + P D++NG+S KGCY Sbjct: 126 RILSKILPDDQTV-DENAYRERRFDFGIPEGPNEVAGE--LPLFMNADIMNGVSANKGCY 182 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+ +R + IRKR + T + + +G+ I +D G + G+K LA+ Sbjct: 183 LGQELTARALNAPEIRKRLLPFTCKNMV--TGTLINSDGRRAGKVIACTGRKGLALVYT- 239 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHWY 272 + ++ P W+ Sbjct: 240 ---SGSNPPTHFQLQNENIEIFLPSWW 263 >gi|83644620|ref|YP_433055.1| aminomethyltransferase GcvT-like protein [Hahella chejuensis KCTC 2396] gi|83632663|gb|ABC28630.1| predicted aminomethyltransferase related to GcvT [Hahella chejuensis KCTC 2396] Length = 330 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 28/274 (10%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+N + +++ G A+ F+Q T D+ + + +A TP+G+++ F I++ + D Sbjct: 28 RLTNVALLEIKGPDAVKFMQGQFTCDIQEITISHSSLAACCTPKGRMVALFRIAQAKPDC 87 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFI----DER 119 ++L + S + L YK+ + + GV+ LS + + S SS + D Sbjct: 88 YLLRLPVEVAQSFLAHLNKYKVFYKCTVTLLEDWGVIGLSGDLDSLPSLSSAVPTSADSC 147 Query: 120 FSIADVLLHRTWGH---------------------NEKIASDIKTYHELRINHGIVDPNT 158 + +LL R G+ N+ A ++ + L + G+ + Sbjct: 148 QTSDGLLLIRPPGNLSRMECWLDSAQASKLLPDLDNQCAAGAVEDWERLEVLSGLGEVYP 207 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 L P + L IS KGCY GQE+V+R+Q+ ++KR +++ P GS Sbjct: 208 QTL-DEFIPQMLNLQALGAISFKKGCYTGQEIVARMQYLGTLKKRMFLLSSETITPAPGS 266 Query: 219 PILTD-DIEIGTLGVVVGKKALAIARIDKVDHAI 251 I+ + IG++ + LA+ D + Sbjct: 267 AIIDETGARIGSVVRSAQGQTLAVLDKSAADGKV 300 >gi|332185466|ref|ZP_08387214.1| aminomethyltransferase folate-binding domain protein [Sphingomonas sp. S17] gi|332014444|gb|EGI56501.1| aminomethyltransferase folate-binding domain protein [Sphingomonas sp. S17] Length = 252 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 15/254 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L++++ +++ G+ FLQ ++T DV L R + +LTPQGK L FL+ E Sbjct: 10 PATTLTDRTLLRIAGEDVCGFLQGLVTQDVQGLTADAPRWAGLLTPQGKALFDFLLW-AE 68 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 D +++ + ++ ++L +L Y+LR + I P V S + + R Sbjct: 69 GDAILIDAEATQAEALTRRLSIYRLRRAITIAPVPELAVHWSLSADT--------QPRDP 120 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 L HR W E S + + R++ G+ + + + LNG+S T Sbjct: 121 RLPDLGHRWWAPAEP-GSATEAWTAHRLSLGVTEGVGELGSGETLWLECNARELNGVSFT 179 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA- 240 KGCY+GQE +R+ HR+ + +R ++ L G ++G + +AL Sbjct: 180 KGCYVGQENTARMHHRSKVNRRLVV----APLGEPGDRTRAVYPDLGLMVEHRRVEALGD 235 Query: 241 IARIDKVDHAIKKG 254 R + ++ A++ G Sbjct: 236 AIRPEWLEQAVEAG 249 >gi|313200647|ref|YP_004039305.1| folate-binding protein ygfz [Methylovorus sp. MP688] gi|312439963|gb|ADQ84069.1| folate-binding protein YgfZ [Methylovorus sp. MP688] Length = 344 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 35/268 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ ++V G+ AI FLQ +T D+ L + + T +G++L FL + Sbjct: 40 ADLSHLGLLQVDGEDAITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQG- 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------------------EIQPIN 98 L+++ S + ++ +L Y LRS V+I E P Sbjct: 99 HIHLQLNGSLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTE 158 Query: 99 GVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIV 154 +S + T RF I + W E+ + + L I GI Sbjct: 159 VHGISTQENATLIRLPGALPRFEIFTSQENAQELWQELEQHFDPVGQTGWDWLEIEAGIP 218 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD 212 + P +D L GI+ KGCY GQE+V+R + +++R +I +T TD Sbjct: 219 EIFP-ATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATDQ 277 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALA 240 +P G + + E +G +V +A Sbjct: 278 IPAPGDEVFIGEGEA--VGQIVRSSGIA 303 >gi|302879423|ref|YP_003847987.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2] gi|302582212|gb|ADL56223.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2] Length = 311 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 30/260 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + LS + ++V G A FLQ +++ D+ + A+ S+ T +G++L FLI + Sbjct: 13 TLCNLSQLATLRVSGSDAHSFLQNLLSNDIREVSATQAQYSSFNTAKGRMLANFLIWRDA 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116 +D ++L++ + D+L KL Y LR+ V I V L + H ++ + Sbjct: 73 DD-YLLQLPETLADALRKKLGMYVLRAQVKITDARHEVVSLGLSGCHPALPATCLELPVM 131 Query: 117 ----------------DERFSIA----DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 D RF + + ++ SD + +R ++ P Sbjct: 132 GVIESAELACRIIKIGDARFMLNCTPEQQPMLSAALDSQMTGSDTWDWLNIRAGTPVILP 191 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 T P DL+ GI+ KGCY GQE+V+R+ + ++R + Sbjct: 192 AT---QEQFVPQMVNFDLIGGINFKKGCYPGQEIVARMHYLGKPKRRMY-LAHVLSAANP 247 Query: 217 GSPILTDDIEIGTLGVVVGK 236 G + ++++ G++V Sbjct: 248 GDELYSEEMADQACGMIVNA 267 >gi|254672451|emb|CBA05856.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 304 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 104/274 (37%), Gaps = 26/274 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112 D +L + + ++ + +L + LR+ + EI V QE + Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAF 135 Query: 113 SSFID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 ++ D I + T + A + HE+R + + T Sbjct: 136 AAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KE 192 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 193 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAVEAGTLLTAD 251 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 252 GEETGIVLDSVQDSENFTALAVIKFSAAQKELTA 285 >gi|261379095|ref|ZP_05983668.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685] gi|269144476|gb|EEZ70894.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685] Length = 287 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 22/269 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + ++V G+ FL ++ D+ L A + TP+G+++ L+ +D Sbjct: 3 TLLPSFGVVRVSGEDRQSFLHGQLSNDINHLQSGQACYATYNTPKGRVIANMLVINRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSFIDE 118 +L + +S + +L + LR+ V+ EI GV + N +F + Sbjct: 63 -LLLAMSEDLTESTVKRLRMFVLRAKVVFEIPDNYGVGAELAESAEPLAAREPNLAFAAQ 121 Query: 119 RFSIADVLLHRTWGHNEKI----------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 + S + G +I A+ + I G T Sbjct: 122 QDSDGICSIALPHGGILRIAPETALPPYDAAAESAWKLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLAADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIKK 253 + V ALA+ + + Sbjct: 240 IVLDSVKDSENFTALAVIKFSAAQKELTA 268 >gi|145356317|ref|XP_001422379.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582621|gb|ABP00696.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 306 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 19/284 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFL--ISKIEE 62 L ++ ++V G A FLQ +T DV L A A LTP+GKI ++ E Sbjct: 15 LDTRAVVRVAGADAAAFLQGAVTNDVRALREGGDAAYCATLTPKGKIFADAFVRLAGSES 74 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D F+L++DR K + L LR V IE + VV++ +S+ R Sbjct: 75 DEFLLDVDREKSSEFLRALRMLSLRKRVTIEDANEHRVVVASADADVGDSSARAVRRDER 134 Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL---RINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + L R A RI G+ + ++ + P + D LNG+S Sbjct: 135 LEQLGFRGIVPASDAAWRDAVADAHARTRIALGVAEGASEL--ANALPLECNFDALNGVS 192 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTD-DIEIGTLGVVVG 235 TKGCY+GQE +R + R ++RKR + P G I+ + +G + + Sbjct: 193 FTKGCYVGQENTARQRFRGVVRKRIAPFVAIEPGARAPSVGGKIVNERGDVVGDVIAAIE 252 Query: 236 KK--ALAIAR----IDKVDHAIKKGMALT-VHGVRVKASFPHWY 272 + L + R + A + G A G RV P W+ Sbjct: 253 DEDAVLGLVRARMSFIRAHVAGEPGSAFRIADGARVGVEPPSWW 296 >gi|91788384|ref|YP_549336.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas sp. JS666] gi|91697609|gb|ABE44438.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas sp. JS666] Length = 317 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 22/282 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++ I+V G+ + FLQ +T DV L AR A +G++ F+I K + Sbjct: 18 AELAHLGVIRVAGEDTVKFLQGQLTQDVALLSLSEARLGAFCNVKGRMQASFVIFKRSPE 77 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQE 107 +L R + + +L + LR+ ++ + W + Sbjct: 78 EVLLVCSRDILPATLKRLSMFVLRAKAMLSDASAEFALYGVAGNAIELIVGGNRPVWTKS 137 Query: 108 HTFSNSS-FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPST 164 S F+ L G E DI ++ L + GI T + Sbjct: 138 DIGDASLMFLHPGAGQPRALWCAPAGSPRPEGPLLDIARWNWLEVRSGIA-MITQPIFEA 196 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + + G++ KGCY GQE+V+R Q R +++R + T +P G + Sbjct: 197 FVPQMLNYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRAY-LAHTAGVPAVGQEVFHAS 255 Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+V A D + +++ A R+ Sbjct: 256 DAEQPCGLVAAAAATPSGGFDAI-VSMQTSAAADAGEGRLTL 296 >gi|300113362|ref|YP_003759937.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113] gi|299539299|gb|ADJ27616.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113] Length = 347 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 41/284 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ A FLQ ++T DV + + ++ + + P+G++L F + + + Sbjct: 43 LSHLGLITVSGEDASDFLQNLLTNDVKEVNSQHSQLTGLCNPKGRLLAIFRLFQWNAN-L 101 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--------------------QPINGVVLSWN 105 L + S ++++ +L Y LR+ V + + + V ++ N Sbjct: 102 YLRLPHSLLEAVLKRLSMYVLRAQVSLADVSDHFCRFGLVGSKARDELKRYLGRVPMAVN 161 Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIVDP 156 + + + RF + L + W K A+ T + I G+ Sbjct: 162 EVQQTPDCCVLRVPGKPSRFEVVGEFDTLQKLWDELSKTATPAGTHFWELATIRAGVATI 221 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPP 215 + ++ P ++L GIS TKGCY GQEV++R+ +R +R + TGTD P Sbjct: 222 YPE-TQASFIPQQVNLELKEGISFTKGCYPGQEVIARMHYRGKPSRRMFLAHTGTDQQPQ 280 Query: 216 SGSPILTDDIE----IGTLGVVV-----GKKALAIARIDKVDHA 250 G PI + E IG + G +L + ++ +++ Sbjct: 281 PGDPIYLANDEAKQVIGEIVTAQPAPEGGYDSLVVLQLARLEKG 324 >gi|113867578|ref|YP_726067.1| aminomethyltransferase [Ralstonia eutropha H16] gi|113526354|emb|CAJ92699.1| Aminomethyltransferase [Ralstonia eutropha H16] Length = 338 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 109/305 (35%), Gaps = 43/305 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G A FL +T V L AR + +P+G++L FL+ + + + Sbjct: 25 CSLPGLGLVRVAGDDAGSFLHTQLTNAVEDLKAGAARLAGYCSPKGRLLATFLMWR-DVE 83 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-----------------------QPINGV 100 +L++ + + +L + LR+ + P+ V Sbjct: 84 GIVLQLSADIQAPVQKRLSMFVLRAKAKLSDITPTHAILGLAGAGAAKALAAAGLPVPEV 143 Query: 101 VLSWNQEHTFSNSSFID----ERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + + D R+ R + + L + G Sbjct: 144 AFAVAEADGITVIRLPDGAGQPRWQLVLPAERAEAVRAALAASLQDATPALWDWLEVQSG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P +L+ G++ KGCY GQE+V+R Q+R +++R ++ G + Sbjct: 204 LPRIVA-ATQEQFVPQMINFELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGEGE 262 Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P + I + G++V G LA +ID A++ G A Sbjct: 263 VPAPAAEIYRPEDPGQPCGMIVNAAPAPQGGWAGLAELKIDAAASALRLGSAEGA--AVA 320 Query: 265 KASFP 269 A+ P Sbjct: 321 TATLP 325 >gi|296314110|ref|ZP_06864051.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC 43768] gi|296839260|gb|EFH23198.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC 43768] Length = 288 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112 D +L + + ++ I +L + LR+ V+ EI V QE + Sbjct: 61 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPNLAF 119 Query: 113 SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++ D + VL H A+ + I G T Sbjct: 120 AAQQDSDGICSIVLPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVKDSENFTALAVIKFSAAQKELTA 269 >gi|308389376|gb|ADO31696.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710] Length = 304 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFID 117 D +L + + ++ I +L + LR+ V+ EI V + + S + Sbjct: 77 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVF 135 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D VL HR H A+ + I G T Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 194 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGE 253 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 254 EAGIVLDSVQDSENFTALAVIKFSAAQKTLSA 285 >gi|220934636|ref|YP_002513535.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] gi|219995946|gb|ACL72548.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] Length = 354 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 44/289 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+Q I G+ A FLQ + DVL L + ++ TP+G++L F + + E Sbjct: 41 CDLSHQGLIVAYGEEAGSFLQGQFSNDVLGLASAHSHLNSYCTPKGRMLANFRVFRRGE- 99 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---------SS 114 ++ L + R+ +S++ +L + LRS V +E V + + S+ Sbjct: 100 SYYLRMPRAMVESVLKRLRMFVLRSKVTLEDADDALVRIGLSGPRAVEELQTALGDVPSA 159 Query: 115 FID----------------ERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154 D RF + L + + W + + + L I GI Sbjct: 160 VNDVLHHNDITAIRVPGPHPRFELYGELEAMKQLWNKLNVRCAPVGAGPWALLDILAGIP 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + T P A M L+ G+S KGCY GQEVV+R+ + +++R +T D P Sbjct: 220 N-VTPATSEAFVPQMANMQLIGGVSFKKGCYPGQEVVARMHYLGKLKRRMYRVTIDTDQP 278 Query: 215 P-SGSPILTDD----IEIGTLGVVVGKK--------ALAIARIDKVDHA 250 P G+ IL E G +V + ALA+ +I + Sbjct: 279 PAPGTEILGAGGGETEEDQAAGRIVDAQLHPDGKVMALAVLQIAAAEAG 327 >gi|255067899|ref|ZP_05319754.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256] gi|255047887|gb|EET43351.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256] Length = 284 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 25/270 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G++L ++ ED Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRVLANMIVLNRGED 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + + ++++ +L + LR+ VI E P V ++ + S ++ F Sbjct: 63 -LLLIMAQDLIEAIVKRLRMFVLRAKVIFEPLPDFAVAGELDETASPSPAAEPALSFPAQ 121 Query: 124 DVLLHRT----------------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 T + A + HE+R + + T T Sbjct: 122 ADNGVYTITLPHSGRLKIGEAGLLPEYDAAAENAWNLHEIRSGYAWISTVT---KETAVA 178 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ G+ KGCY GQE+++R Q+R +++ ++ G D L +G + E Sbjct: 179 QMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLRG-DSLEAAGVTVQNGGEEA 237 Query: 228 GTL----GVVVGKKALAIARIDKVDHAIKK 253 G + +G +LA+ + + Sbjct: 238 GQIINTALTDIGSLSLAVIKFSAAHADLTD 267 >gi|262277435|ref|ZP_06055228.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114] gi|262224538|gb|EEY74997.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114] Length = 273 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 7/266 (2%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N+ I + G + FL IIT DV + + S +L+PQGK++ +F ISKI ++ F++ Sbjct: 11 NKRVISITGDESETFLNNIITNDVKKINSNNSIYSCLLSPQGKVISHFFISKI-DNKFLI 69 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFS-IADV 125 +D D LI+KL FYKLRS V I+ + + V+ + ++ F++ F D R Sbjct: 70 IVDDYLSDDLIEKLNFYKLRSQVDIKDENLYNVIFTTDENFKFNSILDFEDPRIPNFGKY 129 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 + + + D + Y++L +G++D + + F + M LN I +KGCY Sbjct: 130 FISKKNDNLGINLEDSEKYYKLINLNGLIDSIFNQIQGQYFSLELNMQELNAIDFSKGCY 189 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE +R+ + I K+ + L SG I + IG + V A+ ++ Sbjct: 190 VGQENTARMSLKEKISKKLFRLNSESKL-SSGEEIFFNKEIIGKI--VSENPNFAMIKML 246 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271 K + K + T ++VK S P+W Sbjct: 247 KFNEFNDKDLK-TQDDIKVKISKPNW 271 >gi|254671408|emb|CBA08895.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 304 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 26/274 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +L + + ++ + +L + LR+ + EI V E + + + Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL--EASAEPLAAQEPSL 133 Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + VL HR H A+ + I G Sbjct: 134 AFTAECVSDGICSVVLPHRGILHIAPETALPPYDAAAESAWKLHEIRSGYP-WICAATKE 192 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +GS + D Sbjct: 193 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAAD 251 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 252 GEEAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 285 >gi|161870132|ref|YP_001599302.1| hypothetical protein NMCC_1171 [Neisseria meningitidis 053442] gi|161595685|gb|ABX73345.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 304 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 D +L + + ++ + +L + LR+ + EI V + + + S + Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVDAELAASAEPLAAQEPSLVF 135 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D VL HR H A+ + I G T Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 194 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + GS + D Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEVGSVLAADGE 253 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 254 EAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 285 >gi|261380351|ref|ZP_05984924.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703] gi|284796872|gb|EFC52219.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703] Length = 285 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 21/268 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G++L L+ ED Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122 +L + + ++++ +L + LR+ V+ E+ P V ++ F Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAKPHPAAEPQLSFPAQ 121 Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + + E A ++ I G T Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYP-WICAATKETAVAQM 180 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 ++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKIGEEEAGV 239 Query: 230 L----GVVVGKKALAIARIDKVDHAIKK 253 + G +LA+ + + A+ Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTD 267 >gi|82702860|ref|YP_412426.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosospira multiformis ATCC 25196] gi|82410925|gb|ABB75034.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosospira multiformis ATCC 25196] Length = 348 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 104/286 (36%), Gaps = 44/286 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I G+ A FLQ ++ D+ A + P+G+IL FLI + D + Sbjct: 43 LSHFGLIHFWGEDAETFLQGQLSCDIRRATTSTASYGSYCNPKGRILATFLIWRTTGDGY 102 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111 ++++ + +L Y LR+ V + V + H + Sbjct: 103 LMQLPAILLAGIQKRLAMYVLRAKVKLADSSGAWVHIGVAGPHAAALLRKILGEIPVVPL 162 Query: 112 ------NSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGIVDP 156 S I R + L I D+ + L I GI Sbjct: 163 GVRHGERGSII--RLAEDRFQLLILPEQAPTIWEDLSRNATQVGKPCWDWLEIRAGIPH- 219 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDL 213 P +D L GIS KGCY GQE+V+R Q+ I++R + DL Sbjct: 220 ILPATQEQFVPQMVNLDTLGGISFQKGCYPGQEIVARTQYLGKIKRRMYLANVRPAAGDL 279 Query: 214 P-PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHA 250 P +G + + D+ + G+VV G LA+ + V+ Sbjct: 280 PIEAGDELFSADLGEQSAGMVVNPASSSDGGTDLLAVIQTSSVEAG 325 >gi|103486912|ref|YP_616473.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis alaskensis RB2256] gi|98976989|gb|ABF53140.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis alaskensis RB2256] Length = 241 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 12/212 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L +++ I++ G+ FLQ ++T DV + +A+LTPQGK L FLI Sbjct: 1 MAITTLRDRALIRLSGEDVRGFLQGLVTNDVSG---NLPVWAALLTPQGKALFDFLIW-G 56 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + D +++ +R + L +L Y+LR + I +P V W E +D R Sbjct: 57 DGDDLLIDCERDAAEGLAKRLTLYRLRRAITIAREPDLCV--HWAPEGDL---GVVDPRL 111 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R + + R+ G+ + ++ T + LNG+S Sbjct: 112 PE---LGRRWLAPADGDEGADAAWRAHRLALGVTEGRSELGDGTTLWLECNAAELNGVSF 168 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 KGCY+GQE +R+ R + +R +++ ++ Sbjct: 169 AKGCYVGQENTARMNWRQKVNRRIVVLPLSEA 200 >gi|88812335|ref|ZP_01127585.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus mobilis Nb-231] gi|88790342|gb|EAR21459.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus mobilis Nb-231] Length = 339 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 44/301 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ I V G A FL + ++ D+ +L AR +A +G+ L + + + Sbjct: 37 LCALSDWGVIHVHGADAAAFLHSQLSNDIQSLDTANARLAAYCNAKGRALALLRVLRTDA 96 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSF------ 115 +L ++ DSLI +L + LRS V + ++ GV+ Sbjct: 97 -GLLLFTHKALTDSLIRRLRMFVLRSKVTLDDVSEAIGVIGLVGAAARPPLQRLMGSLPE 155 Query: 116 ------------------IDERFS--IADVLLHRTWG--HNEKIASDIKTYHELRINHGI 153 + +RF+ + LL W N + + L I GI Sbjct: 156 QVGGVQNADEIRLIRLDCVPDRFALVVPGRLLPELWARLANTLPVVSSEAWRLLEIRAGI 215 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 T P ++ L GIS +KGCY GQEV++R+ + +++R + Sbjct: 216 P-TITPATQEAFVPQMLNLEPLQGISYSKGCYPGQEVIARMHYLGKLKRRMYRLHTQTAT 274 Query: 214 PPSGSPIL---TDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVRVK 265 P+ I+ T E GT+ + LA+ RI+ + + +L ++G ++ Sbjct: 275 APAPGEIVRAGTGGQEAGTVVTAAQATPESCELLAVLRIE-----LAEQNSLLLNGAPLQ 329 Query: 266 A 266 Sbjct: 330 P 330 >gi|218768283|ref|YP_002342795.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491] gi|121052291|emb|CAM08620.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491] Length = 288 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 104/273 (38%), Gaps = 26/273 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112 D +L + + ++ + +L + LR+ + EI V QE + Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAF 119 Query: 113 SSFID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 ++ D I + T + A + HE+R + + T Sbjct: 120 AAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KE 176 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +GS + D Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAAD 235 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 236 GEEAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|319410530|emb|CBY90895.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594] Length = 288 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112 D +L + + ++ + +L + LR+ V+ EI V QE + Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPNLAF 119 Query: 113 SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++ D + L H A+ + I G T Sbjct: 120 AAQQDSDGICSIALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 269 >gi|319638072|ref|ZP_07992836.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102] gi|317400717|gb|EFV81374.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102] Length = 285 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 103/270 (38%), Gaps = 25/270 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G++L L+ ED Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + + ++++ +L + LR+ V+ E+ P V S + ++ + S Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLAV--SGELADNAAPHPAVEPQLSFL 119 Query: 124 DVL----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 + + +E A ++ I G Sbjct: 120 AQIQENTVEIALPHTGRLKISAAENASEYQAEAENAWNLHEIRSGYP-WICAATKEAAVA 178 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E Sbjct: 179 QMLNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEA 237 Query: 228 GTL----GVVVGKKALAIARIDKVDHAIKK 253 G + G +LA+ + + A+ Sbjct: 238 GVILNTALTEQGSLSLAVIKFSAAEAALTD 267 >gi|307294356|ref|ZP_07574200.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1] gi|306880507|gb|EFN11724.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1] Length = 245 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++ Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKPGEPRWTALLTPQGKALFDFILWAD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +D +++ + ++ D+L +L Y+LR V I + + W E +D R Sbjct: 61 GDD-VLIDCEAAQADALAKRLTIYRLRRKVAI--AREESLAVHWALEAADKP---LDPRL 114 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L HR W + R+ G+ + + I + L G+ Sbjct: 115 P---ALGHR-WIAPADGGDAAAAFRAHRLALGVFEGAGELGQDQILWLETNAGELGGVDY 170 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 KGCY+GQE +R+ +RN + +R + + + Sbjct: 171 DKGCYVGQENTARMHYRNKVSRRLVAVPLAEA 202 >gi|297538278|ref|YP_003674047.1| folate-binding protein YgfZ [Methylotenera sp. 301] gi|297257625|gb|ADI29470.1| folate-binding protein YgfZ [Methylotenera sp. 301] Length = 345 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 41/285 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ +++ G A+ FLQ +T DV L A + +P+G++L F Sbjct: 42 CDLSHLGLLEISGDDAVTFLQGQVTNDVRLLGDNHAHYTGYCSPKGRLLALFFAF-SHNQ 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSW 104 LE+++ + + +L Y +RS V I + P V Sbjct: 101 KLHLELNQKLLEPIAKRLKMYVMRSKVTINDVSDSTVRFGLSGNNIAELLAPFFATVPKL 160 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------YHELRINHG 152 E T + + I A + ++ G+ E+ + + + L I G Sbjct: 161 PYESTSTENGTII-CMPNAGMPRYQIVGNTEQAKAIWQALKKDCKPVGKACWEWLEIQTG 219 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTD 211 I D P +D LN I+ KGCY GQE+V+R + +++R + +D Sbjct: 220 IPDVYLS-TQEEFVPQMLNLDALNAINYKKGCYTGQEIVARTHYLGKVKRRTQLAHVSSD 278 Query: 212 DLPPSGSPIL-TDDIEIGTL-----GVVVGKKALAIARIDKVDHA 250 P G ++ + IG + G L R++ + A Sbjct: 279 SCPTIGDDVVDANQQAIGKIVRCAPATDAGFVILVECRLESLALA 323 >gi|325128313|gb|EGC51197.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568] Length = 287 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 26/271 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSF 115 +L + + ++ + +L + LR+ + EI V QE + ++ Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQ 121 Query: 116 ID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 D I + T + A + HE+R + + T T Sbjct: 122 QDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KETAV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237 Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253 G + V ALA+ + + Sbjct: 238 TGIVLDSVQDSENFTALAVIKFSAAQKELTA 268 >gi|194740816|ref|XP_001952886.1| GF17494 [Drosophila ananassae] gi|190625945|gb|EDV41469.1| GF17494 [Drosophila ananassae] Length = 281 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 31/259 (11%) Query: 40 RGSAILTPQGKILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 L G++L +I + DTF++E DR L Y++R I+I ++ Sbjct: 14 CYGLFLNKSGRVLYDTIIYRTNNRDTFLVECDREASAEFRRHLRTYRVRK--SIDIDSVD 71 Query: 99 GVVLSW-------NQEHTFSNSSF---IDERFSIADVLL---------------HRTWGH 133 +W T N D R S + R Sbjct: 72 DEYSTWVMFSPKSEPVPTSPNPDLFVSPDARLSSLGTRILAPTDMNWSQLVKGYWRNNEF 131 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + AS+ Y LR G+ + + + P FP +A D L+G+S KGCY+GQE+ +R Sbjct: 132 SASPASEECNYQLLRYEQGVGEGSLELPPGKCFPLEANADYLHGVSFQKGCYVGQELTAR 191 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 I H +IRKR M I T + + ++G + + +A+ RI++V + Sbjct: 192 IHHSGVIRKRYMPIRLTAPIGSNKDVTSVAGAKLGRVCGSAHNRGVALLRIEQV---LNG 248 Query: 254 GMALTVHGVRVKASFPHWY 272 L V G R A P W+ Sbjct: 249 RQELMVDGERCYADRPQWW 267 >gi|325136232|gb|EGC58840.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579] gi|325202024|gb|ADY97478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240149] gi|325208223|gb|ADZ03675.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NZ-05/33] Length = 287 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 26/271 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSF 115 +L + + ++ + +L + LR+ + EI V QE + ++ Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQ 121 Query: 116 ID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 D I + T + A + HE+R + + T T Sbjct: 122 QDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KETAV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237 Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253 G + V ALA+ + + Sbjct: 238 AGIVLDSVQDSENFTALAVIKFSAAQKELAA 268 >gi|225075688|ref|ZP_03718887.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens NRL30031/H210] gi|224952959|gb|EEG34168.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens NRL30031/H210] Length = 285 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 21/268 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G++L L+ ED Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122 +L + + ++++ +L + LR+ V+ E P V ++ FS Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFEPMPDLAVSGELADNAEPHPATEPQLSFSAQ 121 Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + + E A ++ I G Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYP-WICAATKEAAVAQM 180 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG- 228 ++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGITVKVGEEEAGI 239 Query: 229 ---TLGVVVGKKALAIARIDKVDHAIKK 253 T G +LA+ + + A+ Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTD 267 >gi|118594673|ref|ZP_01552020.1| Glycine cleavage T protein (aminomethyl transferase) [Methylophilales bacterium HTCC2181] gi|118440451|gb|EAV47078.1| Glycine cleavage T protein (aminomethyl transferase) [Methylophilales bacterium HTCC2181] Length = 298 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 32/294 (10%) Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 +S L S I+V G+ A FLQ IT D+ + + + + P+G++L +F I K Sbjct: 5 LSLYPLHKEFSLIEVSGEDASTFLQGQITNDINLVNETTSVYAGLCNPKGRLLAFFHILK 64 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGVVLSWNQEHTFSNS 113 + D+F L + +++ KL Y LRS V I +Q + F + Sbjct: 65 LH-DSFFLICPQCIAENIAKKLAMYVLRSKVVIAINTTIRLQGFEFAGEGLCDKVGFPEN 123 Query: 114 SFIDERFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHG 152 + + F + + R G N + + + + + I + Sbjct: 124 TNTMQSFLREGMHVTRISGINPRYLCLADNSTITTFMTAHKTHVVEKTCECWKQTSITNK 183 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGT 210 I + + P +DL+N I+ KGCY GQE+V+R + ++KR +G Sbjct: 184 IPNIYLE-TQGKFIPQSLNLDLINAINFKKGCYTGQEIVARTHYLGTVKKRLFRGVWSGD 242 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 L G+ ILT++ +G + K+ + + ++K +AL H +R+ Sbjct: 243 KTLLNLGNEILTNETLVGQVIDYSSDKSESDILFELKVDSVKDHLALHGHSLRL 296 >gi|313668398|ref|YP_004048682.1| hypothetical protein NLA_10930 [Neisseria lactamica ST-640] gi|313005860|emb|CBN87316.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06] Length = 288 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 D +L + + ++ + +L + LR+ V+ EI V + + + S Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D VL HR H A+ + I G T Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSE-AEAGTLLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELTA 269 >gi|15676912|ref|NP_274058.1| hypothetical protein NMB1024 [Neisseria meningitidis MC58] gi|7226264|gb|AAF41424.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325140256|gb|EGC62781.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385] gi|325144399|gb|EGC66701.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240013] gi|325200291|gb|ADY95746.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis H44/76] Length = 288 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 99/273 (36%), Gaps = 26/273 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +L + + ++ + +L + LR+ + EI V E + + + Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELEASAEPLAAQEPSL 117 Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + VL HR H A+ + I G Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKE 176 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTAD 235 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V AL + + + Sbjct: 236 GEEAGIVLDSVQDSENFTALTVIKFSAAQKTLT 268 >gi|152981354|ref|YP_001353678.1| glycine cleavage T protein [Janthinobacterium sp. Marseille] gi|151281431|gb|ABR89841.1| glycine cleavage T protein [Janthinobacterium sp. Marseille] Length = 349 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 33/265 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++ I G A FL +T DV L AR + +P+G++L FL + D Sbjct: 41 APLTHLGLIAASGDDAANFLHNQLTNDVEHLGSSEARLAGYCSPKGRLLASFLYWQTA-D 99 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111 +L++ R + ++ +L + LR+ + V+L S Sbjct: 100 RIMLQLPRELQATIQKRLQMFILRAKAKLADVSEEYVMLGIAGPAAASALMPWFPTLPVA 159 Query: 112 ---------------NSSFIDERFSIADVLLHRT--WGHNEKI--ASDIKTYHELRINHG 152 +++F R+ + W H +I AS +H I+ G Sbjct: 160 IYGKVDNEAGTVIRHSNAFEVPRYQWITTVEQAIEAWPHLTEILQASGADAWHLAEIDGG 219 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P +LL G++ KGCY GQE+V+R Q+ +++R + + T Sbjct: 220 VPHITA-ATQEQFVPQMINFELLGGVNFKKGCYPGQEIVARSQYLGKLKRRMLHASVTAT 278 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKK 237 G+ I + + G+VV + Sbjct: 279 QVAPGTEIFSANDPDQPCGMVVNAE 303 >gi|241764590|ref|ZP_04762606.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN] gi|241365953|gb|EER60579.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN] Length = 304 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 103/291 (35%), Gaps = 32/291 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + I+V G+ A FL +T D L + AR +A L+P+G++ F+ K Sbjct: 9 APLPHLGVIRVEGEDAAKFLHGQLTQDFALLDLQHARLAAFLSPKGRMQASFIGFKCSAT 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L R + +L + LR+ + + + S + ++ A Sbjct: 69 EVLLICSRDLLAPTLKRLSMFVLRAKARLSDASADYALYGLAGSAIESVAGGAQPAWTKA 128 Query: 124 D-------------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 D + T D + + G+ T + Sbjct: 129 DFGAATVVHLYPALGQPRAIWVAPATEPAPAGATLDTALWQWSDVQSGVA-TLTAPVVDA 187 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + ++G++ KGCY GQEVV+R Q R +++R I + G+ I Sbjct: 188 FVPQMLNYESVDGVNFKKGCYPGQEVVARSQFRGTLKRRAYIAHADAPM-AVGAEIFAAS 246 Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G VV G A+ +I A++ G A GV + S Sbjct: 247 DLEQPCGTVVQVAPAPGGGVDAIVSLQIAATQDALQVGAA---GGVPITLS 294 >gi|325982020|ref|YP_004294422.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212] gi|325531539|gb|ADZ26260.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212] Length = 342 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 37/300 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ I+ G A FLQ+ ++ D+ + +IA+ T +G+IL FL+ + + Sbjct: 41 TDLSHRGLIQFSGDDAKNFLQSQLSCDIREISSEIAQYGGYCTSKGRILASFLLWQKNQ- 99 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVI----------IEIQPINGVVLSWNQEHTFSNS 113 + I+++ S S I +L Y LRS V I + N VL+ + +NS Sbjct: 100 SVIMQLPASLVASTIKRLSLYILRSKVQLTDISNACIRIGVAGPNVSVLTAEFCKSANNS 159 Query: 114 S-FIDERFSIADVLLHR------------TWGHNEKIASDIKT--YHELRINHGIVDPNT 158 ID+ S+ V +R W ++ A+ + T + L I GI Sbjct: 160 DPVIDKEISMLHVANNRMEVITSLENAPAVWERLKQNANPVGTACWDWLDIQSGIPIILP 219 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSG 217 + T P +D + G+S KGCY GQE+V+R Q+ +++R ++ T + +G Sbjct: 220 E-TQETFLPQMINLDAIGGVSFKKGCYPGQEIVARTQYLGKLKRRMFLVHLTTTETIKAG 278 Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 + + D+ + G +V G ALA+ + V+ +L +++K S P Sbjct: 279 DALYSADVVDQSCGNIVNIAPSPCGGYDALAVIQQSSVNTCNIHWQSLQGPTLKIK-SLP 337 >gi|241760121|ref|ZP_04758219.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114] gi|241319575|gb|EER56005.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114] Length = 285 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 103/285 (36%), Gaps = 23/285 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G++L L+ ED Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122 +L + + ++++ +L + LR+ V+ E+ P V ++ F Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLVVSGELADNAEPHPATEPQLSFPAQ 121 Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + + E A ++ I G Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAGAENAWNLHEIRSGYP-WICAATKEAAVAQM 180 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 ++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGV 239 Query: 230 L----GVVVGKKALAIARIDKVDHAIK--KGMALTVHGVRVKASF 268 + G +LA+ + + A+ G AL + Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTDADGNALKQEELFFTVEK 284 >gi|116689916|ref|YP_835539.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia HI2424] gi|116648005|gb|ABK08646.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia HI2424] Length = 344 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|309379187|emb|CBX22144.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 288 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 22/272 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSF 115 D +L + + ++ I +L + LR+ V+ EI V + + +F Sbjct: 61 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPSLAF 119 Query: 116 IDERFSIA---DVLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 E S VL HR H A+ + I G T Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSTV-EAGTLLAADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELTA 269 >gi|261400643|ref|ZP_05986768.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC 23970] gi|269209550|gb|EEZ76005.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC 23970] Length = 288 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVITNMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ I +L + LR+ V+ EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D VL HR H A+ + I G T Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E+G + V ALA+ + + Sbjct: 238 EVGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|301155519|emb|CBW14987.1| predicted folate-dependent regulatory protein [Haemophilus parainfluenzae T3T1] Length = 279 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 10/244 (4%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ Sbjct: 3 TFISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGASTLTAHCDPKGKMNSLFRLIKLS 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + F++ + ++ L D L Y + S V ++ ++ ++ E + I+ Sbjct: 63 TEQFLILMPKALLAPL-DHLKKYAVFSKVTFQV--LDWQIVGLIGEKCGRIHAQIELDID 119 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 +L + D K + I G+ + + + P + + IS Sbjct: 120 ENRAILLNPTPLDVTFNGDEKQWLCADIQAGLPSLSAE-TQNEFIPQALNLQAIEQAISF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ +++G + P GS I T + GT+ V Sbjct: 179 TKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEIEMQLETAWRKTGTIVSAVN 238 Query: 236 KKAL 239 + Sbjct: 239 FDGI 242 >gi|254805066|ref|YP_003083287.1| hypothetical protein NMO_1104 [Neisseria meningitidis alpha14] gi|254668608|emb|CBA06179.1| conserved hypothetical protein [Neisseria meningitidis alpha14] Length = 288 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 26/274 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +L + + ++ + +L + LR+ + EI V E + + + Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL--EASAEPLAAQEPSL 117 Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + VL HR H A+ + I G Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKE 176 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAAD 235 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253 E G + V ALA+ + + Sbjct: 236 GEEAGIVLDSVQDSENFTALAVIKFSAAQKTLSA 269 >gi|107028926|ref|YP_626021.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia AU 1054] gi|105898090|gb|ABF81048.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia cenocepacia AU 1054] Length = 344 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L A+ S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSAQLSGYCSPKGRLLASFLTWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|254490944|ref|ZP_05104126.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxidans DMS010] gi|224463853|gb|EEF80120.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxydans DMS010] Length = 315 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 27/259 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L++ S I V G A FLQ ++T V L A+ + + +P+G++L F + K E Sbjct: 21 ALTPLADLSIIIVSGDDAGSFLQNLLTNAVNALKPHQAQLNGLCSPKGRLLAIFQLIKRE 80 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--------- 112 +D +++ + +++ +L +KLRS V I + V N ++ ++ Sbjct: 81 QD-YLIVLPAELAEAIAQRLSMFKLRSKVDIALSDSLAAVGIINPDNKMTDLPSTTMQGS 139 Query: 113 ---------SSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + RF LL W + + + L I G+ D Sbjct: 140 ETELGLLIKQAGQSPRFLAICEKDKTLLLSEWLTDGWQLTTQAFWQLLDIEAGVPAIFND 199 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGS 218 P ++L+ G+S KGCY GQEVV+R+ + +R + G+ +LP + + Sbjct: 200 -SKEQFTPQQVNLELVGGVSFKKGCYPGQEVVARLHYLGSPNRRMFLARVGSGELPQANT 258 Query: 219 PILTDDIEIGTLGVVVGKK 237 P+ DD TLG VV + Sbjct: 259 PVSDDDD--NTLGHVVQAQ 275 >gi|254247996|ref|ZP_04941317.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184] gi|124872772|gb|EAY64488.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184] Length = 344 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPIVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDNVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|325142449|gb|EGC64853.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis 961-5945] gi|325198415|gb|ADY93871.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136] Length = 287 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFIDERF 120 +L + + ++ I +L + LR+ V+ EI V + + S + Sbjct: 63 -LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D VL HR H A+ + I G T Sbjct: 122 CVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V ALA+ + + Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267 >gi|307109324|gb|EFN57562.1| hypothetical protein CHLNCDRAFT_143206 [Chlorella variabilis] Length = 338 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 22/282 (7%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE---DT 64 ++ IK+ G + +PFLQ I++ DV L P + +LT QG+ L + +E T Sbjct: 42 RTVIKLEGSNLMPFLQRIVSNDVTQLAPGGPPLYACVLTAQGRFLHDLFLHAVEGADVPT 101 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------DE 118 + + D ++R L+D L Y L +V + V++ SS D Sbjct: 102 VLADCDAAQRRPLMDLLQHYSLHHSVSVSNAGKAYAVMAAFGGGIAGASSAPERAWAADP 161 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R G + + Y R+ HG+ + +++ P + +D L G+ Sbjct: 162 RLPALGRRAVLPRGSAPAPTASWRDYRAWRMQHGVGEGDSEMPSGEANPLECNLDALRGL 221 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 S KGCY+GQE V+R+ R ++RKR M + D+ + + +G + VV G Sbjct: 222 SFAKGCYVGQEGVARVHARGVVRKRLMP-SHVFDVYDADESLSA----VGRVRVVQGGLG 276 Query: 239 LAIARIDKVDHAIKKGMALTVHG-------VRVKASFPHWYK 273 LA R+ + AI++ L V G + P W++ Sbjct: 277 LATIRLQQAMAAIREEKPLLVGGLEAGSGYAEIWPWRPEWWE 318 >gi|258567086|ref|XP_002584287.1| predicted protein [Uncinocarpus reesii 1704] gi|237905733|gb|EEP80134.1| predicted protein [Uncinocarpus reesii 1704] Length = 348 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 35/235 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK 59 V L+N++ I + G + FLQ +I+ +V + L QG++L I Sbjct: 57 VRLTNRALISLTGVDSTAFLQGLISQNVVTPKNRASPTTPFYAGFLNAQGRLLHDTFIYP 116 Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 E +++E+D+++ +L+ +KLRS + + + + W+ Sbjct: 117 TFAPEGSNGADTGSELGYLVELDKAQVSNLMKHFKKHKLRSKLKLRALEEGEKDIWAVWD 176 Query: 106 QEHTFSNS----------SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELR 148 + + +D R L G + + + TYH R Sbjct: 177 NTGNWEAKDSGDVLREVLTCVDNRVPDFGHRLLLDEGSLQSSLELFPGQEASLSTYHLRR 236 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 I HG+ + + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR Sbjct: 237 ILHGVPEGQDELVRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKR 291 >gi|121634976|ref|YP_975221.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18] gi|120866682|emb|CAM10434.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18] gi|261392454|emb|CAX50003.1| putative aminomethyl transferase [Neisseria meningitidis 8013] gi|325132534|gb|EGC55227.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190] gi|325138308|gb|EGC60877.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis ES14902] Length = 288 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 100/273 (36%), Gaps = 26/273 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L ++V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +D +L + + ++ + +L + LR+ + EI V + + + Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELAASAEPLAAQEPCL 117 Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + VL HR H A+ + I G Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLHEILSGYP-WICAATKE 176 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTAD 235 Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 236 GEETGIVLDSVKDSESFTALAVIKFSAAQKELT 268 >gi|325204265|gb|ADY99718.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M01-240355] Length = 287 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 26/271 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + + ++ + +L + LR+ + EI V E + + + + A Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAV--GAELEASAEPLAAQEPNLAFA 119 Query: 124 D-----------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 + + A+ + I G T Sbjct: 120 TQQDSDGICSIALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETAV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237 Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253 G + V AL + + + Sbjct: 238 AGIVLDSVQDSENFTALTVIKFSAAQKELTA 268 >gi|73666722|ref|YP_302738.1| glycine cleavage T protein(aminomethyl transferase) [Ehrlichia canis str. Jake] gi|72393863|gb|AAZ68140.1| Glycine cleavage T protein(aminomethyl transferase) [Ehrlichia canis str. Jake] Length = 278 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 22/278 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L N+S + G A L T +VL L A S +L+P G+ + F + + E+ Sbjct: 5 IVLPNRSIVLFHGPDARQLLNRTTTNNVLNLTQNKAVYSLLLSPSGRYMYDFFVVQYEK- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114 +L+ +D +I K L YKL+S V+I + V + +E + + Sbjct: 64 YILLDCCSIDKDEIIQKFLSYKLQSKVVIREKKHYKVGVFIGEESSSNVCGYTYCEGNTI 123 Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 F D R S + + + + A K Y LRIN+ + D N D + T FP Sbjct: 124 FFQDPRLSTLGLRVIFDESNEALSNVNSDAERYKDYEMLRINNTVPDCNKDMIKGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 MD N I KGCYIGQEVV+R+ +R ++K+ + + + ++ D ++G Sbjct: 184 QFRMDEFNAIDFNKGCYIGQEVVARM-YRAGVKKKIYTVISESESFD-DTKVMWDQKQVG 241 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 L VG L + I+ D+ L + ++K Sbjct: 242 ELLSNVGNIGLCLLDINSCDNL----CDLKIGKAKIKV 275 >gi|319793763|ref|YP_004155403.1| folate-binding protein ygfz [Variovorax paradoxus EPS] gi|315596226|gb|ADU37292.1| folate-binding protein YgfZ [Variovorax paradoxus EPS] Length = 308 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 115/296 (38%), Gaps = 40/296 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + + Sbjct: 10 ATLSHLGVIRAEGPDAASFLHGQLTQDFSLLGATEARLAALCTAKGRVIASFIGIRPQPE 69 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SSFIDER 119 + +L R + + +L Y LR+ + + +N ++ +R Sbjct: 70 SILLVCSRDILAATLKRLSMYVLRAKAKLTDATDQFALYGLAGTALTANGLDAATPPGKR 129 Query: 120 FSI-----------ADVLLHRTW--------GHNEKIASDIKTYHELRINHGIVDPNTDF 160 +I AD + W K+ +D+ + E+R GIV T Sbjct: 130 TAIGDDISVVSLYPADGVPRALWIAPAHHAAPAGPKLDADLWQWSEVR--SGIVTVTTPI 187 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 + P + + G++ KGCY GQE+V+R Q R +++R ++ + G + Sbjct: 188 I-EAFVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLMQADAPV-AVGQEV 245 Query: 221 LT---DDIEIGTLGVVV-----GKKALAIARIDKVD-----HAIKKGMALTVHGVR 263 + +GT+ G AL +I ++ G ALTV + Sbjct: 246 FAASDGEQPVGTVAQAAQAPGGGWSALVSMQISALEAGALHAGAATGPALTVEPLP 301 >gi|316984646|gb|EFV63610.1| glycine cleavage T protein [Neisseria meningitidis H44/76] gi|325134208|gb|EGC56857.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M13399] gi|325206147|gb|ADZ01600.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M04-240196] Length = 287 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 98/270 (36%), Gaps = 26/270 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + + ++ + +L + LR+ + EI V E + + + + Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELEASAEPLAAQEPSLAFT 119 Query: 124 D----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 VL HR H A+ + I G T Sbjct: 120 AECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237 Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIK 252 G + V AL + + + Sbjct: 238 AGIVLDSVQDSENFTALTVIKFSAAQKTLT 267 >gi|57238820|ref|YP_179956.1| hypothetical protein Erum0890 [Ehrlichia ruminantium str. Welgevonden] gi|58578749|ref|YP_196961.1| hypothetical protein ERWE_CDS_00850 [Ehrlichia ruminantium str. Welgevonden] gi|57160899|emb|CAH57804.1| putative aminomethyl transferase [Ehrlichia ruminantium str. Welgevonden] gi|58417375|emb|CAI26579.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 280 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 22/278 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+S I G L T ++L L A S +LTP G+ L F + + + Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFVIQGSK- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114 +L+ S R+ +I+K L YKL++ V+I+ + V + +++ + Sbjct: 64 YILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDTV 123 Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 F D R S + + + + E+ + + Y LRI++ + D N D + T FP Sbjct: 124 FFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 M LNGI KGCYIGQEVV+R+ +R I+K I +L + + ++++ E+G Sbjct: 184 HFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQELFEN-AKVMSNQQEVG 241 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 T+ +G L + +++ L V G +VK Sbjct: 242 TVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVKI 275 >gi|73975454|ref|XP_539326.2| PREDICTED: similar to CG8043-PA [Canis familiaris] Length = 276 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 23/234 (9%) Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------- 111 E F+LE D + +L L YK+R V +E P V + Sbjct: 39 EAPAFLLECDSAVLGALQGHLALYKIRRKVKVEPCPELRVWAVLPSSPEDAGGAVPLWEQ 98 Query: 112 -NSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPS 163 N + I R + R E +A D++ YH R G+ + D P Sbjct: 99 ANGATILTRDPRTACMGWRLLTQEEGLALVPRGQLGDLRDYHRHRYRQGVPEGIRDLPPG 158 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----S 218 P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + LP SG + Sbjct: 159 VALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVQLSGPLPASGITPGTT 218 Query: 219 PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++ G G LA+ R +K+ + + V V S P W+ Sbjct: 219 VLMESGQVAGKYRAGQGDVGLALLRSEKIRGPLHIRTS-ESGQVAVTVSVPDWW 271 >gi|328876509|gb|EGG24872.1| putative mitochondrial transferase [Dictyostelium fasciculatum] Length = 398 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 129/371 (34%), Gaps = 102/371 (27%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI----ARGSAILTPQGKILLYFLIS- 58 V L N++ ++V GK ++ FLQ + T ++ L + + L G++L ++S Sbjct: 14 VPLKNRTLVRVSGKDSVKFLQGLTTNNLTRLSDNQNTHASIYTGFLASTGRLLFDAIVSL 73 Query: 59 ---------------------KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI 97 ++I+++D + D + + L FYK+R V IE Sbjct: 74 EKQSTTTTSTASTTAATASDSNSATHSYIVDVDSAVADKVFEHLKFYKMRDKVTIEDATQ 133 Query: 98 NGVVLSWNQ------------EHTFSNSSFI--DERFSIADVLLHRTWGHNEKI------ 137 + V+S EH + D R + + Sbjct: 134 HYSVMSVLDKTYKTIRNDKLFEHLEEEQCSVMMDPRHDNMGIRILVPNSKTSIAKKDLFS 193 Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 D + YH R+ +GI + D+ +T+ P + DLLNG+ KGCY+GQE+ SR Sbjct: 194 TYSEEDEELYHLYRLQNGIPEGLKDYNYNTVIPLEYNFDLLNGVDFHKGCYLGQELTSRT 253 Query: 195 QHRNIIRKRPMIITGTD------------------------DLPPSGSPI---------- 220 + +IRKR +T + PPS + + Sbjct: 254 HYTGLIRKRIFPVTMKAKDEHVYPKEDHLLFSPYVLNSLNINTPPSDTELKVTMKNKGAN 313 Query: 221 --LTDDIEIG----------------TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 TD + G LA+ +++ +D K + Sbjct: 314 SPFTDKEQDGPSPSSTPAPSAGRSTEKFISGRQNVGLAMIKVEHIDAGDFKHTIIKDKES 373 Query: 263 R-VKASFPHWY 272 R ++ P W+ Sbjct: 374 RQLQLLEPCWW 384 >gi|325579260|ref|ZP_08149216.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392] gi|325159495|gb|EGC71629.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392] Length = 279 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 6/221 (2%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ Sbjct: 3 TFISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGTSTLTAHCDPKGKMNSLFRLIKLS 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + F++ + ++ L D L Y + S V ++ ++ ++ E + I+ Sbjct: 63 AEQFLILMPKALLAPL-DHLKKYAVFSKVTFQV--LDWQIVGLIGEKCGRIHAQIELDID 119 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 +L + D K + I G+ + + + P + + IS Sbjct: 120 ENRAILINPTSLDVTFNGDDKQWLCADIQAGLPSLSAE-TQNEFIPQALNLQAIEQAISF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI 220 TKGCYIGQE V+R ++R ++ +++G + P GS I Sbjct: 179 TKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219 >gi|30249485|ref|NP_841555.1| glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas europaea ATCC 19718] gi|30138848|emb|CAD85425.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas europaea ATCC 19718] Length = 348 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 33/266 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ I+ G+ A FLQ ++ DV ++ A TP+G++L FL+ + + Sbjct: 40 LIDLSHFGLIRFSGEDAQNFLQGQLSCDVRSVDSTQASHGGYCTPKGRLLGSFLLWQDSD 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------------- 106 +++++++ + +++ +L + LR+ V I+ + + + Sbjct: 100 NSYLMQLPAERVETITRRLKMFVLRAKVSIQDNTDDLIRIGIAGKNALLSLQNMLPDTTI 159 Query: 107 -EHTFSNSSFID--------ERFSIADVLLHR--TWGHNEKIA--SDIKTYHELRINHGI 153 + +S D RF I + W K A + + L I GI Sbjct: 160 SPAPLAVTSIPDGQIICHSENRFEIMTTSIQAPSLWEQLNKQAHCAGAAIWDWLEIREGI 219 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P +D++ G+S KGCY GQE+V+R ++ +++R + D Sbjct: 220 P-AIFNATQEQFIPQMINLDIIGGVSFKKGCYPGQEIVARTEYLGKVKRRMYLAHLDADS 278 Query: 214 ---PPSGSPILTDDIEIGTLGVVVGK 236 +G + D G++ Sbjct: 279 CQNIAAGDSLFGTDTGDQACGMIANA 304 >gi|206560330|ref|YP_002231094.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315] gi|198036371|emb|CAR52267.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315] Length = 344 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 102/281 (36%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 +L + + + ++ +L + LR+ Sbjct: 93 HGVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDANDTLAVAGFAGDVRDALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|325130373|gb|EGC53139.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis OX99.30304] Length = 287 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 26/271 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++V G+ FL ++ D+ L A + TP+G+++ ++ D Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + + ++ + +L + LR+ + EI V E + + + + Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAV--GAELEASAEPLAAQEPSLAFT 119 Query: 124 D----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 VL HR H A+ + I G T Sbjct: 120 AECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEE 237 Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253 G + V ALA+ + + Sbjct: 238 AGIVLDSVKDSESFTALAVIKFSAAQKELTA 268 >gi|124267051|ref|YP_001021055.1| hypothetical protein Mpe_A1862 [Methylibium petroleiphilum PM1] gi|124259826|gb|ABM94820.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 323 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 38/284 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + I+ G A FL +T D+ L AR +A +P+G++L F+ K Sbjct: 15 AVRLLHSGVIRAAGADAASFLHGQLTNDMTGLGLGEARLAAYCSPKGRMLASFVAFKRSH 74 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118 D L + + +L + LR+ + + V++ + + + Sbjct: 75 DEIWLACRSDVLPATLKRLRMFVLRAKAQLSEGGDDAVLVGLAGRSAAAWLAQVLPAAVN 134 Query: 119 -----RFSIADVLLHRTWG-------------------HNEKIASDIKTYHELRINHGIV 154 R ++ D LL R N A ++ + L ++ G+ Sbjct: 135 GAVWSRHALDDALLVRLPDGAGQARWLWAGPAAQTDAVLNALPALALERWDWLEVHSGVA 194 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 P P +L+ G++ KGCY GQE+V+R Q+R I++R ++ G Sbjct: 195 -PIVANTVEAFVPQMLNYELVGGVNFQKGCYPGQEIVARSQYRGTIKRRAALVHGDAAAL 253 Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHA 250 P G + + G++ G AL ++ +D Sbjct: 254 P-GQEVFWSGDDAQPSGLIALAAPAPGGGWDALVELKLSALDDG 296 >gi|34496817|ref|NP_901032.1| hypothetical protein CV_1362 [Chromobacterium violaceum ATCC 12472] gi|34102672|gb|AAQ59037.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 344 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 38/302 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L N + I+V G+ A FLQ ++ D+ + + A+ S T +G++L FLI + + Sbjct: 40 LAPLDNFALIRVEGEDAAAFLQGQLSNDIREVTTERAQYSTYSTAKGRMLASFLIW-LRD 98 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFI 116 + L + +++ +L + LRS V + + ++G+ + F ++ Sbjct: 99 GAYYLMVSADIAETVAKRLTMFVLRSKVKVVLDREWSLLGVSGIAIEQALHKHFPGAAGA 158 Query: 117 DE---RFSIADVLLHRTWG-------HNEKIASDI-----------KTYHELRINHGIVD 155 +E F +LL G I D+ + + I GI Sbjct: 159 EEMRVAFQSEGILLALPSGGYLLAERDGGGIGKDLAQMEGLEAALPEAWAWKDIQAGIA- 217 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T P A M+L+ ++ KGCY GQE+V+R Q+ +++R ++ LP Sbjct: 218 WVTQATQEQFVPQMANMELIGAVNFKKGCYPGQEIVARSQYLGKMKRRMFKVSFDAALP- 276 Query: 216 SGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G+ + + D IG L LA+A+ + I T+ R++ Sbjct: 277 VGAKLYSPQLPDQSIGMLASECRVGENAYLGLAVAQSQTWEAGIFADEGHTIALRRLELP 336 Query: 268 FP 269 +P Sbjct: 337 YP 338 >gi|194289602|ref|YP_002005509.1| aminomethyl transferase [Cupriavidus taiwanensis LMG 19424] gi|193223437|emb|CAQ69442.1| putative aminomethyl transferase [Cupriavidus taiwanensis LMG 19424] Length = 341 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 43/300 (14%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++V G A FL +T V L AR + +P+G++L FL+ + + D +L+ Sbjct: 30 LGLVRVAGDDAASFLHTQLTNAVDDLAPGTARLAGYCSPKGRLLATFLMWR-DADGIVLQ 88 Query: 69 IDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV----LSWNQEHTFSNSSFIDERFSIA 123 + + ++ +L + LR+ + +I P + ++ +Q + + F++A Sbjct: 89 LSAEIQAAVQKRLSMFVLRAKAKLSDITPAHAILGVAGAGASQALGAAGLPAPEAPFAVA 148 Query: 124 DVLLH--------------------------RTWGHNEKIASDIKTYHELRINHGIVDPN 157 R + + L + G+ Sbjct: 149 GADGVTVIRLPDSAGQPRWQLVLPAERADAVRAALSATLTGAAPALWDWLEVQSGLPRIV 208 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 P +L+ G++ KGCY GQEVV+R Q+R +++R ++ G ++P Sbjct: 209 A-ATQEQFVPQMINFELVGGVNFRKGCYPGQEVVARSQYRGTLKRRMWLVQGEGEVPAPA 267 Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 + I + G++V G LA +ID A++ G A A+ P Sbjct: 268 AEIYRPEDPGQPCGMIVNAAPAPDGGWAGLAELKIDAAGSALRLGSAEGA--AVATANLP 325 >gi|168027952|ref|XP_001766493.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682402|gb|EDQ68821.1| predicted protein [Physcomitrella patens subsp. patens] Length = 428 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 115/349 (32%), Gaps = 83/349 (23%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIAR--------------GSAILTPQ 48 L + I G I FLQ ++T DV L P +A+L Q Sbjct: 65 LKTRRVISFDGPDVIDFLQGLVTNDVSKLVREPSGETPTPSPNAPLVYQPPLYAAMLNSQ 124 Query: 49 GKILLYFLISKIEED------------------TFILEIDRSKRDSLIDKLLFYKLRSNV 90 G+ L + K + ++D D +I L + LR + Sbjct: 125 GRFLYDLFLYKPSAGAEKLDRSGSGPGKSKDTPELLADVDAGLVDEIIGYLKKHILRKKI 184 Query: 91 IIEIQPIN--------GVVLSWNQEHTFSNSSFI-------------------------D 117 ++ + G + T S + I D Sbjct: 185 EVKDVSKDFSVWQHYGGTLAEKPDNTTESEAGAIGWGGTKDESALRSSETSGDEWLWYKD 244 Query: 118 ERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 R S + + + + Y R+ G+ + +T+ P + + Sbjct: 245 PRLSTLGLRGVFSTSALPPLVEAGTKVEEDYYLLWRMEQGVAEGSTEIPKGEAIPLEYNL 304 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-------TDDLPPSGSPIL--TD 223 LN I KGCY+GQE+V+R HR +IRKR M + D G+ ++ Sbjct: 305 AGLNAIDFNKGCYVGQELVARTHHRGVIRKRVMPLNFVQANGEEAQDAVTPGADVVDKKA 364 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 ++G + V+G + L + R+ + + + VKA P W+ Sbjct: 365 GKKVGKVTTVLGPRGLGLIRLASASDGSELCIE-NQEDIHVKAVRPKWW 412 >gi|90021900|ref|YP_527727.1| TonB-dependent receptor [Saccharophagus degradans 2-40] gi|89951500|gb|ABD81515.1| glycine cleavage T protein (aminomethyl transferase) [Saccharophagus degradans 2-40] Length = 322 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 110/274 (40%), Gaps = 28/274 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ L + I+V G A FLQ T D ++ A +G+++ F +K+ Sbjct: 24 AIPLLDHVLIEVKGPDAEKFLQGQCTCDFKSIANGKFSLGAHCNVKGRMVSSFTAAKLGP 83 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108 + F L +S + + L Y + S V +EI V +N + Sbjct: 84 EHFGLRTHKSNAEKALATLKKYAVFSKVSLEISSSLAAVAVFNTQANEVPFFNATAEVGC 143 Query: 109 --TFSNSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + S+ ++ L R + + + I G+ + D Sbjct: 144 STALEQGACLAHTNSMQELWLARENIQQLLEQLPVAAPHYWTAYNIAQGVAEVTAD-STE 202 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPSGSPIL 221 + P + + LL G+S KGCY GQE+V+R+ ++ ++K + + P +G+ ++ Sbjct: 203 QLIPQEINLQLLGGVSFNKGCYTGQEIVARMHYKATLKKHMYRAQLAPSTSAPATGTALI 262 Query: 222 TDDIE-----IGTLGVVVGKKALAIARIDKVDHA 250 ++ + + ++ G + LA+ +D H+ Sbjct: 263 NEEGKNVGQVVQSVTTDAGAQILAL-TLDTAAHS 295 >gi|326316630|ref|YP_004234302.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373466|gb|ADX45735.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC 19860] Length = 304 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 100/280 (35%), Gaps = 23/280 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ + + Sbjct: 8 LAPLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRAGD 67 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L R +++ +L + LR+ + + + + + + +S Sbjct: 68 AEVLLVCSRDVLATVLKRLSMFVLRAKARLSDATADFALWGLAGDTVAAVAGEALPPWSR 127 Query: 123 ADVL------LHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPS 163 D LH G + + + + G+ + Sbjct: 128 QDTPQGTVVHLHPGAGQPRALLAQPAGQPAPAGPALAPGLWEWGEVQSGVPTLTAPLV-E 186 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + + G++ KGCY GQEVV+R Q R +++R + + + G+ + Sbjct: 187 LFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPEPI-AVGAEVFAA 245 Query: 224 DIEIGTLGVVVGKKALAIARIDK--VDHAIKKGMALTVHG 261 G VV A D G AL V G Sbjct: 246 SDAEQPCGTVVQAAAAPGGGFDALVALQVASTGEALRVGG 285 >gi|260797663|ref|XP_002593821.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae] gi|229279051|gb|EEN49832.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae] Length = 255 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 18/241 (7%) Query: 49 GKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL 102 G++L L+ ++ + + +LE D + SLI L YK+R V I + V Sbjct: 9 GRVLYDILMYNLQSNPDSPPSLLLECDHTAVPSLIKLLKMYKIRKKVDICSVADEYTVWA 68 Query: 103 SWNQEHTFS------NSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGI 153 S ID R + G N + + + YH R G+ Sbjct: 69 LLPGTSDPPVFVSDTGLSVIDPRLPDLGNRVVLKSGTNLVFDCVEGTSEDYHTHRYQLGV 128 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P + + LNG+S KGCY+GQE+ +R H +IRKR M +T Sbjct: 129 GEGVNDLPTGNCTPLECNLAFLNGVSFDKGCYVGQELTARTHHTGVIRKRLMPVTLDRPA 188 Query: 214 P-PSGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 +GS + + +G G +A+ R+ + + V +KA P W Sbjct: 189 SLEAGSTLTNEKGKNVGKFRHAQGVHGIALVRLAHSQEKLYCKQD-SGEEVGLKAETPKW 247 Query: 272 Y 272 + Sbjct: 248 W 248 >gi|58616809|ref|YP_196008.1| hypothetical protein ERGA_CDS_00820 [Ehrlichia ruminantium str. Gardel] gi|58416421|emb|CAI27534.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 280 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 22/278 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N+S I G L T ++L L A S +LTP G+ L F + + + Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFVIQGSK- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114 +L+ S R+ +I+K L YKL++ V+I+ + V + +++ + Sbjct: 64 YILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDTV 123 Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 F D R S + + + + E+ + + Y LRI++ + D N D + T FP Sbjct: 124 FFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 M LNGI KGCYIGQEVV+R+ +R I+K I L + + ++++ E+G Sbjct: 184 HFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQKLFEN-AKVMSNQQEVG 241 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 T+ +G L + +++ L V G +VK Sbjct: 242 TVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVKI 275 >gi|134295923|ref|YP_001119658.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia vietnamiensis G4] gi|134139080|gb|ABO54823.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia vietnamiensis G4] Length = 344 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 111/301 (36%), Gaps = 42/301 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L+ I V G A FL +T D+ L AR + +P+G++L FL + Sbjct: 33 ACMPLAQFGVIDVAGDDAATFLHGQLTNDIEHLDAASARVAGYCSPKGRLLASFLAWREG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 +L + + + ++ +L + LR+ Sbjct: 93 HGVRLL-VSKDVQAAVQKRLSMFVLRAKAKLSDASDAVAVVGFSGDVRDALSGVFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ GV++ +I R + D + G ++ + + L Sbjct: 152 GVHVKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALAGTLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G T + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + G D +G + D G++V A +D + K AL V V A Sbjct: 268 VAGETDSVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDALVE--IKLAALDSGSVHVGA 325 Query: 267 S 267 + Sbjct: 326 A 326 >gi|149926475|ref|ZP_01914736.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter sp. MED105] gi|149824838|gb|EDM84052.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter sp. MED105] Length = 350 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 114/292 (39%), Gaps = 25/292 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS+ +LS I V G A+ FLQ+ ++ DV + R + + T +G++L F + + Sbjct: 51 MSAQFLSRWGVIGVDGDDAVTFLQSQLSNDVAGMAESQLRMAGLCTAKGRLLGSFFVLRH 110 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------------WNQE 107 + F++ + +L+ +L + LRS + + + W+++ Sbjct: 111 GKQVFLV-CRQETVTALVKRLSMFVLRSKCKVRDCTADYQLAFVPDSGPTSPMRVQWDEQ 169 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 T + +S S L G E+ ++ + GI + P Sbjct: 170 GTAT-ASLRALNGSTPGFQLVVGNGKTEQSSAADDQFEFALQQLGIAY-VSQPTVEMFIP 227 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTDDIE 226 DL+ G+S +KGCY GQE+V+R + +++R T T L +G + E Sbjct: 228 QAINFDLVGGVSFSKGCYPGQEIVARSHYLGKVKRRVFQATATGSLTVTAGQDVWLAGKE 287 Query: 227 ---IGTLGVVVGKKALAIARID-KVDHAIKKGMALTVHG----VRVKASFPH 270 G + V ++ VD A + G TV + + P Sbjct: 288 NEPAGAVATAVNFNGQQYLLVELPVDDAEQSGAIFTVKNDAGAIALNVQPPP 339 >gi|254252183|ref|ZP_04945501.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158] gi|124894792|gb|EAY68672.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158] Length = 344 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 40/270 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 93 HDVRLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDTLSRIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ GV++ +I R + D + ++ + + L Sbjct: 152 GVHVKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALGDALPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G T P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPR-ITQPTVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 + G D+ +G + D G++V Sbjct: 268 VAGETDVAHAGVELFHGDDPGQPCGMIVNA 297 >gi|298368398|ref|ZP_06979716.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str. F0314] gi|298282401|gb|EFI23888.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str. F0314] Length = 300 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 104/268 (38%), Gaps = 21/268 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + ++V G+ F+ ++ D+ L A + TP+G++L L+ D Sbjct: 17 TRLPFFAIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRVLANMLVLNRGSD 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L + ++++ +L + LR+ V+ E P ++ ++ F A Sbjct: 77 -LLLVMAADLTEAIVKRLRMFVLRAKVVFEPLPDYAAAAVLDENTEAHAAAEPSLSFPAA 135 Query: 124 DVLLHRT----------WGHNEKI----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + T G E++ A+ ++ I G + T Sbjct: 136 EENGVWTVSLPHTGRLKIGEAERLPEHDAAAENAWNLHEIRSGYA-WISAATKETAVAQM 194 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 ++ G+ KGCY GQE+++R Q+R +++ +++G L +G +L + E G Sbjct: 195 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-GSLEAAGIAVLENGAEAGQ 253 Query: 230 L----GVVVGKKALAIARIDKVDHAIKK 253 + G +LA+ + + Sbjct: 254 IINTALTDTGSLSLAVIKHAAAQAVLTD 281 >gi|268684583|ref|ZP_06151445.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268624867|gb|EEZ57267.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 288 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|77165932|ref|YP_344457.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus oceani ATCC 19707] gi|254434606|ref|ZP_05048114.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus oceani AFC27] gi|76884246|gb|ABA58927.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus oceani ATCC 19707] gi|207090939|gb|EDZ68210.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus oceani AFC27] Length = 347 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 118/304 (38%), Gaps = 45/304 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I + G+ A FLQ ++T DV + + ++ + + P+G++L F + + + Sbjct: 41 TDLSHFGLIAISGEDASDFLQNLLTNDVKEVNSQRSQLTGLCNPKGRLLAIFRLFQWNAN 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------------QPINGVVLSWNQEH 108 F L + S ++++ +L Y LR+ V + L Sbjct: 101 -FYLSLPHSLLEAVLKRLNMYVLRAQVSLADVSDHFCRFGLVGSQASDELKRYLGKAPMT 159 Query: 109 TFSNSSFID----------ERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154 T D RF + + L + WG K + + + I G+ Sbjct: 160 TNEVQQAPDCCILRVPGEPSRFEVVGGMNTLQKFWGELTKTVTPVGANFWELTTIRAGVA 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213 + ++ P ++L G+S TKGCY GQEV++R+ +R +R + TD Sbjct: 220 TIYPE-TQASFIPQQVNLELREGVSFTKGCYPGQEVIARMHYRGKPSRRMFLAHISTDQQ 278 Query: 214 PPSGSPILTDDIEI----GTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 P G P+ + E G + G +L + ++ ++KG + G Sbjct: 279 PQPGDPVYLANDEARQARGEIVAAQLAPEGGYDSLVVLQLSH----LQKGDMMWNGGNGA 334 Query: 265 KASF 268 K + Sbjct: 335 KLTL 338 >gi|315635020|ref|ZP_07890301.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393] gi|315476282|gb|EFU67033.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393] Length = 304 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 16/266 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++ S I++ G A +LQ +T DV L + +A P+GK+ F + + +E Sbjct: 24 CPLTHYSLIEIVGTDAEKYLQGQLTCDVTKLAVGESTLTAHCDPKGKMSALFRLIRQDEQ 83 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 TF + + + S +D+L Y + S V + + + + R I Sbjct: 84 TFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRIDIN 143 Query: 124 D-----VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNG 177 +LL+ T+ E + + L I G+ P + + Sbjct: 144 GQQPRVILLNPTYLALEPTVE-AEAWDLLDIQDGVP-GLAAATQLEFIPQALNLQSVEQA 201 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI---LTDD-IEIGTLGV 232 IS KGCYIGQE V+R ++R ++ I T LP GS + L D+ GT+ Sbjct: 202 ISFHKGCYIGQETVARAKYRGANKRALFIFAARTQSLPEIGSALEMALGDNWRATGTITS 261 Query: 233 VVGKKALAIARIDKV-DHAIKKGMAL 257 V + + V + +++G A Sbjct: 262 AVNFHG--VLWLQAVLNTPLEEGQAF 285 >gi|240016314|ref|ZP_04722854.1| hypothetical protein NgonFA_03954 [Neisseria gonorrhoeae FA6140] gi|254493985|ref|ZP_05107156.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260440231|ref|ZP_05794047.1| hypothetical protein NgonDG_03921 [Neisseria gonorrhoeae DGI2] gi|268595045|ref|ZP_06129212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268596575|ref|ZP_06130742.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268601621|ref|ZP_06135788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268603962|ref|ZP_06138129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682425|ref|ZP_06149287.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291043527|ref|ZP_06569243.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513025|gb|EEH62370.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548434|gb|EEZ43852.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268550363|gb|EEZ45382.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268585752|gb|EEZ50428.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268588093|gb|EEZ52769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268622709|gb|EEZ55109.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291011990|gb|EFE03979.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|317164506|gb|ADV08047.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae TCDC-NG08107] Length = 288 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|194098941|ref|YP_002002006.1| hypothetical protein NGK_1381 [Neisseria gonorrhoeae NCCP11945] gi|193934231|gb|ACF30055.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] Length = 288 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|59800982|ref|YP_207694.1| hypothetical protein NGO0548 [Neisseria gonorrhoeae FA 1090] gi|293398842|ref|ZP_06643007.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62] gi|59717877|gb|AAW89282.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|291610256|gb|EFF39366.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62] Length = 288 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|268686893|ref|ZP_06153755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627177|gb|EEZ59577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 288 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V ALA+ + + Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268 >gi|238021253|ref|ZP_04601679.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147] gi|237868233|gb|EEP69239.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147] Length = 285 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 99/273 (36%), Gaps = 15/273 (5%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L + I+ G A FL + D+ LP A + TP+G+++ LI++ Sbjct: 1 MHTTQLPFFAVIRATGDDAADFLHNQFSNDIKNLPANQACYATYNTPKGRVIAN-LIAQN 59 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +L + ++++ +L Y LR+ V EI P GV S + S F Sbjct: 60 TGNEILLALAADLVEAVVKRLKMYVLRAKVQFEILPDWGVAGSLKSNTPPQHPSEPQLSF 119 Query: 121 SI---ADVLLHRTWGHNEKIASDIK--------TYHELRINHGIVDPNTDFLPSTIFPHD 169 + ++ L T +++ + + I G + Sbjct: 120 PVNAQGEIQLPHTGSLKIAPCAELPAYDAAAEAAWQQHEILSGYP-WICAATSESCVAQM 178 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 + G+ KGCY GQEV++R Q+R +++ I T E G Sbjct: 179 LNQHTIGGVHFRKGCYPGQEVIARAQYRGQVKRGLAIATSPAAQSAGAIVQYEAGAEAGI 238 Query: 230 LGVVVGKKALAIARIDKVDHAIK--KGMALTVH 260 + G L + + ++ G A V Sbjct: 239 VINTSGSLNLLVIKHSAAHSPLRDAAGNAFAVQ 271 >gi|70997319|ref|XP_753409.1| aminomethyl transferase [Aspergillus fumigatus Af293] gi|74673542|sp|Q4WVK5|CAF17_ASPFU RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|66851045|gb|EAL91371.1| aminomethyl transferase, putative [Aspergillus fumigatus Af293] gi|159126864|gb|EDP51980.1| aminomethyl transferase, putative [Aspergillus fumigatus A1163] Length = 447 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 76/364 (20%), Positives = 127/364 (34%), Gaps = 93/364 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT D + +A L QG++L Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLIANDPRRATRRTGTYTAFLNSQGRVLNDAF 104 Query: 57 ISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104 I + +++E+D+++ SL+ L +KLRS + + V SW Sbjct: 105 IYPMPKGDSETDTTGDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSW 164 Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137 +++ ID R L + ++ Sbjct: 165 KDHAEPRWAAYNLESESSSPFAPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQV 224 Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R Sbjct: 225 AGSQVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRT 284 Query: 195 QHRNIIRKRPMII------------------TGTDDLPPSGSPILT----DDIEIGTLGV 232 H ++RKR + + + LPPSGS I G Sbjct: 285 HHTGVVRKRIVPVQLYANSAPQSGDTPVYDPSAAVALPPSGSNISKVDGRKGRSAGKFLG 344 Query: 233 VVGKKALAIARIDKVDHAIKKG-----------------------MALTVHGVRVKASFP 269 VG LA+ R++ + + G A V+VKA P Sbjct: 345 GVGNIGLALCRLEIMTDIVLTGEGSHYSPEQEFKISWSAPEEGSSSATEPGEVKVKALVP 404 Query: 270 HWYK 273 W + Sbjct: 405 PWLR 408 >gi|326921387|ref|XP_003206941.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Meleagris gallopavo] Length = 248 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 29/237 (12%) Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 EE +LE D S D++ L YK+R V I + E S Sbjct: 10 EEPHILLECDSSVLDAVQKHLKLYKIRRKVSISPCLDLSLWAVIPGEQAGDISGSLAQYA 69 Query: 115 ------FIDERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIVDPNTDFLP 162 D R + L G N +I+ YH R GI + D P Sbjct: 70 ERALVLTPDPRAEVMGWRLIVKAGANLPEVIPGSRIENIQDYHRHRYKQGIPEGVKDLPP 129 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PSGS 218 P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P G+ Sbjct: 130 GVPLPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPEGA 189 Query: 219 PILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272 ILT+ G + +A+ R+ ++ + L V G V++ AS P W+ Sbjct: 190 EILTETGKAAGKFRAGGDELGIALLRLANINEPL----CLNVAGNKVKLTASIPEWW 242 >gi|307211751|gb|EFN87746.1| Putative transferase C1orf69, mitochondrial [Harpegnathos saltator] Length = 304 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 108/294 (36%), Gaps = 56/294 (19%) Query: 31 VLTLPYKIA-RGSAILTPQGKILLYFLISKIEEDT-FILEIDRSKRDSLIDKLLFYKLRS 88 + L + + L +G++L +I K E+ + + LE D +SL L Y+++ Sbjct: 1 MKHLEEGASNIYTLFLNVKGRVLYDAIIYKSEKSSSYYLECDSQIAESLQRHLRLYRVKR 60 Query: 89 NVIIE-IQPINGVVLSWNQEHTFSNSS--------------------------------- 114 + +E + ++ F + S Sbjct: 61 KIDVEHTGDKINIWTMFDSSSRFDHGSAALDENGKRKVEGMIFPCGTLNNKASKFVDNIM 120 Query: 115 -FIDERFSIADVLL--------HRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLP 162 F D R + + H H + + + Y R G+ + D P Sbjct: 121 IFEDPRLPDLGLRILAESHIGTHDIIKHLDDDVISSENASDYRAFRYKLGVGEGVQDLPP 180 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGSPI 220 P + D L+G+S KGCYIGQE+ +R H ++RKR M +T + D P S Sbjct: 181 GKALPLEINCDYLHGVSFHKGCYIGQELTARTYHTGVVRKRLMPLTFENIADKPLSYDEK 240 Query: 221 LTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + D +G K L + RI++ A L V GV VK + P W+ Sbjct: 241 ILDQSGNVVGKFRGYTEKHGLGLMRINESLSA----QQLNVAGVNVKVTKPAWW 290 >gi|239815836|ref|YP_002944746.1| folate-binding protein YgfZ [Variovorax paradoxus S110] gi|239802413|gb|ACS19480.1| folate-binding protein YgfZ [Variovorax paradoxus S110] Length = 308 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 36/292 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + + Sbjct: 12 LSDLGVIRAEGPDAASFLHGQLTQDFALLGATEARLAALCTAKGRVIASFVGIRPQPELV 71 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS----SFIDERFS 121 +L R + + +L Y LR+ + + +N + +R + Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATEQFALYGLAGTALAANGLDATALPGQRTA 131 Query: 122 I-----------ADVLLHRTW------GHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 I AD + W A D + + + GIV T + Sbjct: 132 IGQDISAVSLYPADGVPRAMWIAPAGSPAPAGPALDAQLWQWSEVRSGIV-TVTTPVVEA 190 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + + G++ KGCY GQE+V+R Q R +++R ++ L +G + Sbjct: 191 FVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLVQADAPL-GAGQEVFAAG 249 Query: 225 IEIGTLGVVV--------GKKALAIARIDKVD-----HAIKKGMALTVHGVR 263 +G V G AL +I ++ G ALTV + Sbjct: 250 DAEQPVGTVAQAAPAPGGGWAALISIQISALETGGLHAGSADGPALTVEPLP 301 >gi|254283511|ref|ZP_04958479.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B] gi|219679714|gb|EED36063.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B] Length = 289 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 17/281 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S YL ++ +++ G A+ FLQ +AD + +G++L FL K+ Sbjct: 10 LSLAYLDQEAVLELTGPDAVSFLQGQSSADFSGSDTQKPILGTFCNVKGRVLADFLAFKV 69 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSN---------VIIEIQPINGVVLSWNQEHTFS 111 ++ +L + D+LI L Y S V I +G ++ ++E + Sbjct: 70 SDERILLRCEGQVGDALITHLQPYLNFSKSTLRRCEGVVYGGIGDQDGSNVTSSEEARDA 129 Query: 112 NSSFIDERFSIADVLLHRT--WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 F RFS A H +++D+ +R + T P D Sbjct: 130 GEWFAIPRFSGATEFWHLGDHPAAATTVSADMWYSEMMRNEDARITGAT---IGKYLPQD 186 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDD--IE 226 DL IS +KGCY GQE+++R+ ++ ++R T T + GS ++ D Sbjct: 187 LNYDLRGYISFSKGCYTGQEIIARLHYKGKPKRRLYRATCTAESDCAPGSDLIVGDQGKA 246 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G++ + I+ +++A + L ++A Sbjct: 247 AGSVVNCASAAGVKYLLIETIENAFDDQLRLADCNTPLQAI 287 >gi|222634911|gb|EEE65043.1| hypothetical protein OsJ_20031 [Oryza sativa Japonica Group] Length = 596 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 59/286 (20%) Query: 41 GSAILTPQGKILLYFLISKIEEDTFILE------------------------------ID 70 +A+LTPQG+ L + + + +L+ +D Sbjct: 301 YAALLTPQGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVD 360 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSFIDERFSIADV 125 ++ D L+ Y+LRS V I+ ++ L W + EHT ++ + + Sbjct: 361 AAEVDELLACFKRYRLRSKVEIDN--VSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQ 418 Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + + +D + Y RI +G+ + +T+ P + LN I Sbjct: 419 GVDHAAESAAQAPLVESDKEADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNFAGLNAI 478 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILT--DDIEIGT 229 S KGCYIGQE+++R HR +IRKR M + D+ GS ++ +IGT Sbjct: 479 SFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQAVAPGSEVVDKESGKKIGT 538 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKASFPHWY 272 + +G + + + R++ A+K+ +L + VRVKA P W+ Sbjct: 539 VNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAIKPDWW 581 >gi|170733254|ref|YP_001765201.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3] gi|169816496|gb|ACA91079.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3] Length = 310 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 93/275 (33%), Gaps = 34/275 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 2 PLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------ 118 +L + + + ++ +L + LR+ + V + + S D Sbjct: 62 RLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGNVRDALSGIFDALPDGVH 120 Query: 119 -----------RFSIADVLLHRTW-------------GHNEKIASDIKTYHELRINHGIV 154 R A W + L + G Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEVDARLAALAGALPVVSPAVWDWLDVRAGEP 180 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212 + P D++ ++ KGCY GQEVV+R Q+R I++R + G D Sbjct: 181 RITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETD 239 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 +G + D G++V A +D + Sbjct: 240 TVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|89901035|ref|YP_523506.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax ferrireducens T118] gi|89345772|gb|ABD69975.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax ferrireducens T118] Length = 317 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 92/259 (35%), Gaps = 25/259 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L++ I+V G+ A FL +T D L AR +A + +G++ F+ K Sbjct: 16 AAKLTHLGVIRVEGEDAAKFLHGQLTQDFSLLGLSEARLAAFCSAKGRMQASFIGFKRSP 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108 +L R + + ++ + LR+ + + V Sbjct: 76 TDILLVCSRDILAATLKRMSMFVLRAKAKLSDATADFAVYGLAGTALQNTIETIAGYEGS 135 Query: 109 -----TFSNSSFID--ERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTD 159 F S ++ A L G A+ + + + GI T Sbjct: 136 AWAKTDFGPISLVNLYPADGTARALWVAPVGAPAPTAAVMTAEQWAWSEVRGGIA-TITQ 194 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + + G+S KGCY GQEVV+R Q R +++R + L +G Sbjct: 195 TVVEAFVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYLAHSESAL-NAGDE 253 Query: 220 ILTDDIEIGTLGVVVGKKA 238 + D G+VV A Sbjct: 254 LFAPDDASQPCGMVVQAAA 272 >gi|307824019|ref|ZP_07654246.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96] gi|307734803|gb|EFO05653.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96] Length = 326 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 29/256 (11%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + + G A FLQ IT ++ + + A+ P+G+ + FL+ K +D F++ Sbjct: 40 HLGVLTIAGSDAAKFLQGQITCNINDITDAKSSLGALCNPKGRAITTFLLVKNADD-FLM 98 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD--- 124 + + S+ +L Y LRS V + ++ E + ++RF+ + Sbjct: 99 ILPQELLASVKKRLQMYVLRSKVTLTDSSDALCLIGLYDEASQPGE-VPEQRFATSSQEN 157 Query: 125 ------------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 L D + L I GI + Sbjct: 158 IVVNLQNRNLIIAGADNAQGLWEKQVKLGFQPEDSAQWRYLDIISGIPWLTAE-TSEEFI 216 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD-- 223 P +D L GIS KGCY GQE+V+R + ++ + P S I+ D Sbjct: 217 PQMLNLDKLGGISFNKGCYTGQEIVARTHYLGKAKREMFLAECDALATPEPNSTIIDDSA 276 Query: 224 --DIEIGTLGVVVGKK 237 + +G + + Sbjct: 277 GTEQSVGKVLYAQNGQ 292 >gi|157423031|gb|AAI53525.1| Zgc:153540 protein [Danio rerio] Length = 276 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 27/260 (10%) Query: 39 ARGSAILTPQGKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93 A + +L QG+ L ++ ++ + +LE D + +DS++ L YK+R V + Sbjct: 11 AMYAHVLNVQGRTLYDIILYSLKGNPEGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLN 70 Query: 94 IQPINGVVLSWN---------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI--- 141 + P + + T ++ + E+ +++ R + DI Sbjct: 71 VCPSLSLWALLPHSKEAILGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSA 130 Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R Sbjct: 131 CRLGNTEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTH 190 Query: 196 HRNIIRKRPMIITGTDDL--PPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 H +IRKR M ++ + GS + G V K L++ R+ ++ Sbjct: 191 HTGVIRKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQ 250 Query: 253 KGMALTVHGVRVKASFPHWY 272 + V V+AS P W+ Sbjct: 251 LKSS-GDETVTVQASVPDWW 269 >gi|240125991|ref|ZP_04738877.1| hypothetical protein NgonSK_07202 [Neisseria gonorrhoeae SK-92-679] Length = 287 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +V G+ FL ++ D+ L A + TP+G+++ ++ +D Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D +L HR H A+ + I G T Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V ALA+ + + Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267 >gi|240013871|ref|ZP_04720784.1| hypothetical protein NgonD_04353 [Neisseria gonorrhoeae DGI18] gi|240121441|ref|ZP_04734403.1| hypothetical protein NgonPI_06688 [Neisseria gonorrhoeae PID24-1] Length = 287 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +V G+ FL ++ D+ L A + TP+G+++ ++ +D Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 63 -LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D +L HR H A+ + I G T Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V ALA+ + + Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267 >gi|239999221|ref|ZP_04719145.1| hypothetical protein Ngon3_07040 [Neisseria gonorrhoeae 35/02] gi|240080433|ref|ZP_04724976.1| hypothetical protein NgonF_03852 [Neisseria gonorrhoeae FA19] gi|240115956|ref|ZP_04730018.1| hypothetical protein NgonPID1_06874 [Neisseria gonorrhoeae PID18] gi|240118253|ref|ZP_04732315.1| hypothetical protein NgonPID_07296 [Neisseria gonorrhoeae PID1] gi|240123801|ref|ZP_04736757.1| hypothetical protein NgonP_07659 [Neisseria gonorrhoeae PID332] Length = 287 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +V G+ FL ++ D+ L A + TP+G+++ ++ +D Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D +L HR H A+ + I G T Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V ALA+ + + Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267 >gi|126452702|ref|YP_001066586.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106a] gi|167845302|ref|ZP_02470810.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei B7210] gi|242315915|ref|ZP_04814931.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106b] gi|126226344|gb|ABN89884.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1106a] gi|242139154|gb|EES25556.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 1106b] Length = 348 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157 Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153 R A W + L + G Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARVPALEAALPRVSAAVWDWLDVRAGE 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + P D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312 >gi|240128504|ref|ZP_04741165.1| hypothetical protein NgonS_07711 [Neisseria gonorrhoeae SK-93-1035] Length = 287 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +V G+ FL ++ D+ L A + TP+G+++ ++ +D Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D +L HR H A+ + I G T Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V ALA+ + + Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267 >gi|117927009|ref|YP_867626.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus sp. MC-1] gi|117610765|gb|ABK46220.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus sp. MC-1] Length = 328 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 116/311 (37%), Gaps = 45/311 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--K 59 + V S+ + G FL +IT + + + A + +LTPQG+ L F+I+ + Sbjct: 18 ALVDWSHTGVATITGDERKDFLSGLITNQIKRVTPECAIYAGLLTPQGRYLWDFIIAEQQ 77 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH--------- 108 ++E+ +L + +LI +L Y LR+ + + ++++ Q Sbjct: 78 MDENPRLLLLTEPGIQNLIGRLSMYLLRAKAKVSDASTTLGSLIVTGPQAPQVLTRLYAD 137 Query: 109 -----------TFSNSSFI---DERFSIADVL----------LHRTWGHNEKIASDIKTY 144 + + D R + L + + Sbjct: 138 IDFANQEPGTTVAPEAGVLVLKDPRHAAFGWRLVAEQAQLPNLWERLQAAQATPVGFHAW 197 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 R+ + D P +A + G+ TKGCY+GQE +R HR ++KR Sbjct: 198 ESYRVAQALPRGGNDLEADITLPLEAGFLEMQGVDFTKGCYVGQETTARTHHRGTLKKRL 257 Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVH 260 + + P I++ +D E G L + G +ALAI R+ + G L + Sbjct: 258 FQVRWQEAASPKLGDIISVGEDKEAGHLTSISPAGGEALAIIRV----SDWESGKPLMLG 313 Query: 261 GVRVKASFPHW 271 ++ + P W Sbjct: 314 QTPLQVTKPAW 324 >gi|115313839|gb|AAI24382.1| Zgc:153540 [Danio rerio] Length = 262 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 27/259 (10%) Query: 40 RGSAILTPQGKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI 94 + +L QG+ L ++ ++ + +LE D + +DS++ L YK+R V + + Sbjct: 1 MYAHVLNVQGRTLYDIILYSLKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSV 60 Query: 95 QPINGVV---------LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---- 141 P + + + T ++ + E+ +++ R + DI Sbjct: 61 CPSLSLWALLPHSKEAVLGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSAC 120 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H Sbjct: 121 QQGNTEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHH 180 Query: 197 RNIIRKRPMIITGTDDL--PPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 +IRKR M ++ + GS + G V K L++ R+ ++ Sbjct: 181 TGVIRKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQL 240 Query: 254 GMALTVHGVRVKASFPHWY 272 + V V+AS P W+ Sbjct: 241 KSS-GDETVTVQASVPDWW 258 >gi|53723621|ref|YP_103082.1| hypothetical protein BMA1427 [Burkholderia mallei ATCC 23344] gi|76811846|ref|YP_333840.1| glycine cleavage T-protein (aminomethyl transferase) [Burkholderia pseudomallei 1710b] gi|121598474|ref|YP_993237.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei SAVP1] gi|124386525|ref|YP_001029318.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei NCTC 10229] gi|126441510|ref|YP_001059318.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 668] gi|134277134|ref|ZP_01763849.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 305] gi|166998741|ref|ZP_02264595.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20] gi|167893846|ref|ZP_02481248.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 7894] gi|167902296|ref|ZP_02489501.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei NCTC 13177] gi|167910537|ref|ZP_02497628.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 112] gi|167918564|ref|ZP_02505655.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei BCC215] gi|217421508|ref|ZP_03453012.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 576] gi|226197475|ref|ZP_03793052.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] gi|254178469|ref|ZP_04885124.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei ATCC 10399] gi|254179463|ref|ZP_04886062.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655] gi|254189150|ref|ZP_04895661.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei Pasteur 52237] gi|254197345|ref|ZP_04903767.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei S13] gi|254200028|ref|ZP_04906394.1| folate-binding protein YgfZ [Burkholderia mallei FMH] gi|254206362|ref|ZP_04912714.1| folate-binding protein YgfZ [Burkholderia mallei JHU] gi|254262077|ref|ZP_04953131.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a] gi|254297344|ref|ZP_04964797.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 406e] gi|254358223|ref|ZP_04974496.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280] gi|262193312|ref|YP_001080745.2| glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei NCTC 10247] gi|52427044|gb|AAU47637.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|76581299|gb|ABA50774.1| Glycine cleavage T-protein (aminomethyl transferase) [Burkholderia pseudomallei 1710b] gi|121227284|gb|ABM49802.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei SAVP1] gi|124294545|gb|ABN03814.1| folate-binding protein YgfZ [Burkholderia mallei NCTC 10229] gi|126221003|gb|ABN84509.1| folate-binding protein YgfZ [Burkholderia pseudomallei 668] gi|134250784|gb|EBA50863.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 305] gi|147749624|gb|EDK56698.1| folate-binding protein YgfZ [Burkholderia mallei FMH] gi|147753805|gb|EDK60870.1| folate-binding protein YgfZ [Burkholderia mallei JHU] gi|148027350|gb|EDK85371.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280] gi|157808043|gb|EDO85213.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 406e] gi|157936829|gb|EDO92499.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei Pasteur 52237] gi|160699508|gb|EDP89478.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia mallei ATCC 10399] gi|169654086|gb|EDS86779.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei S13] gi|184210003|gb|EDU07046.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655] gi|217395250|gb|EEC35268.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 576] gi|225930854|gb|EEH26864.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] gi|243065095|gb|EES47281.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20] gi|254220766|gb|EET10150.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a] gi|261835038|gb|ABO04361.2| folate-binding protein YgfZ [Burkholderia mallei NCTC 10247] Length = 348 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157 Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153 R A W + L + G Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + P D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312 >gi|304320079|ref|YP_003853722.1| glycine cleavage system T protein, aminomethyltransferase [Parvularcula bermudensis HTCC2503] gi|303298982|gb|ADM08581.1| glycine cleavage system T protein, aminomethyltransferase [Parvularcula bermudensis HTCC2503] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 19/275 (6%) Query: 9 QSFIKVCGKSAIPFLQAIIT--ADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + V G FL ++T D R A+LTPQGKIL + + D ++ Sbjct: 10 RDLVSVAGDDRFTFLGNVLTIRCD---ADGPPLRYGALLTPQGKILDTYFMWARG-DHYL 65 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SWNQEHTFSNSSFIDE 118 ++ + + ++ +L Y LR+ V I V + N + + D Sbjct: 66 FDLPKGRGEAFAGRLKRYALRAAVTIAPVDDINVGIRPDHPTDQGPNGRDDAALTLLPDP 125 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R G A Y + I GI D T F + FP D +D L GI Sbjct: 126 RLPTLGARG-LWAGSAAAGAPVEAEYRDHLIRLGIPDLGTGFDEADAFPLDVNLDRLGGI 184 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-- 236 KGC++GQEV SR+ + IRKR ++G +P G ++ +I++GT+ G Sbjct: 185 DHKKGCFVGQEVASRMFRKGEIRKRTYCLSG-AQIPALGQSVMVGEIKLGTVTARSGDGR 243 Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 ALA+ R+D++ + T G ++ + P W Sbjct: 244 AALALVRLDRL-GGREDSAVTTADGADLQLTAPFW 277 >gi|237812642|ref|YP_002897093.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346] gi|237505565|gb|ACQ97883.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346] Length = 348 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157 Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153 R A W + L + G Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSATVWDWLDVRAGE 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + P D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312 >gi|167823758|ref|ZP_02455229.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 9] Length = 341 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157 Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153 R A W + L + G Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 217 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + P D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312 >gi|325183767|emb|CCA18225.1| hypothetical protein TTHERM_00155360 [Albugo laibachii Nc14] Length = 366 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 136/345 (39%), Gaps = 81/345 (23%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S V LS++ ++V GK A FLQ I+T D+ L + + ++ LT +G+IL + ++ Sbjct: 14 SVVKLSSRKLVQVEGKDASRFLQGILTNDINKLKQRSSMYASFLTAKGRILGDCNVIRVN 73 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------WNQEHTFS 111 E+TF ++ D S ++ L + YKLR V IE + +L+ + Sbjct: 74 EETFWIDYDASSKEGLQNHWKRYKLRMKVSIEDRSDQFNILALLPALYRYPGLQKTSLDG 133 Query: 112 NSS---------------FIDERFSIADVLLH-----RTWGHNEKIASDIKTYHELRINH 151 S+ F D R + + + H+ ++D + + RI Sbjct: 134 ESAIFDKLETAYGSRHLIFTDPRSKMFGIRAVVEGNDESIVHDAFESADASIFDDRRIFL 193 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----- 206 G + + + P +A +D L+G+S +KGCY+GQE+++R + ++RKR + Sbjct: 194 GAAEGSE---LHDLIPLEANLDALDGVSFSKGCYVGQELMARTHFKGLVRKRIIPCAILP 250 Query: 207 -----------------------------------ITGTDDLPPSGSPI--LTDDIEIGT 229 + G D+ G+ + IG+ Sbjct: 251 AGDQAKELDNLQAAFRSIDDREAISLREYLLNTPALAGQLDV-QRGTKVICTESSKPIGS 309 Query: 230 LGVVVGKK--ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + + ALA+ R++ + H R+ P W+ Sbjct: 310 VIAIAPGIRAALAMIRLEHLSHYQFTTPD---GAFRLIPYQPFWW 351 >gi|329910243|ref|ZP_08275261.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Oxalobacteraceae bacterium IMCC9480] gi|327546229|gb|EGF31267.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Oxalobacteraceae bacterium IMCC9480] Length = 334 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 104/285 (36%), Gaps = 37/285 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I G A FL +T DV L AR + TP+G++L FL+ + D+ Sbjct: 29 LTDLGLIAFEGDDAANFLHNQLTNDVEHLGIDQARLAGYCTPKGRLLASFLMWRT-VDSI 87 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SW------NQE 107 +LE+ R + ++ +L + +R+ + ++ SW Sbjct: 88 VLEVARDIQPAIQKRLQMFVMRAKAKSSDLTDSSAIIGLGGDAAGAALASWFPLLPDAPY 147 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIV 154 N++ R + A ++ W +IA + I I Sbjct: 148 AKVENAAGTVIRLADAGTMVRYQWITTPEIAIAAWPQLGTTLRQAGTEHWRLTEILAAIP 207 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 P ++ + G++ KGCY GQE+V+R Q+ +++R + + + Sbjct: 208 HITL-ATQEKFVPQMVNLEAIGGVNFRKGCYPGQEIVARSQYLGKLKRRTLPASVSAPEV 266 Query: 215 PSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGM 255 +G + + G++V L ++ A+ G Sbjct: 267 AAGMEVFAANEPEQPCGMIVNAARDASGLHHCLVEIKTAALDAGT 311 >gi|158512691|sp|A1DDV0|CAF17_NEOFI RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor Length = 447 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 116/313 (37%), Gaps = 70/313 (22%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + FLQ +IT D + +A L QG++L Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLVANDPSRATRRTGTYTAFLNSQGRVLNDAF 104 Query: 57 ISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104 I ++ +++E+D+++ SL+ L +KLRS + + V SW Sbjct: 105 IYPMPKGDGETATTDDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSW 164 Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137 +++ ID R L + ++ Sbjct: 165 KDHSEPRWAAYNLESESSSPFSPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQV 224 Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R Sbjct: 225 AGSEVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRT 284 Query: 195 QHRNIIRKRPMII------------------TGTDDLPPSGSPILT----DDIEIGTLGV 232 H ++RKR + + T LPPSGS I G Sbjct: 285 HHTGVVRKRIVPVQLYAKSPLPSGETPVYDPTAAVALPPSGSNISKVDGRKGRSAGKFLG 344 Query: 233 VVGKKALAIARID 245 VG LA+ R++ Sbjct: 345 GVGNIGLALCRLE 357 >gi|291614445|ref|YP_003524602.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1] gi|291584557|gb|ADE12215.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1] Length = 350 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 41/272 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS I+V G+ A FLQ ++++DV + A+ S+ T +G++L FLI + Sbjct: 40 LCDLSQFGTIRVHGEEAQNFLQNLLSSDVNAVTPAAAQFSSFNTAKGRVLATFLIWRGGN 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108 D F L++ R + KL Y LR+ +E V L + + Sbjct: 100 DHF-LQLPRELVAPIQKKLSMYVLRTKAKVENAGDAFVSLGLSGPNANALVKELVGPPPE 158 Query: 109 ---TFSNSSFID-------------ERFSI------ADVLLHRTWGHNEKIASDIKTYHE 146 ++++ D +RF I A L + G + S + Sbjct: 159 VVMAVASTAHFDTQQSHFTVIRLGEQRFQINVAPGHAADLWKKLSGAARPVGSPCWDWLN 218 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 +R ++ P T P +DL+ ++ KGCY GQE+V+R+Q+ ++R + Sbjct: 219 IRAGIPVILPQT---QEAFVPQMTNLDLIGAVNFKKGCYPGQEIVARMQYLGKNKRRMYL 275 Query: 207 IT-GTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +D LP G + + ++E G VV + Sbjct: 276 AHVFSDALPQPGDELFSTEMEGQACGTVVNAQ 307 >gi|268599276|ref|ZP_06133443.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583407|gb|EEZ48083.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 288 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 22/271 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +V G+ FL ++ D+ L A + TP+G+++ ++ Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117 +D +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 61 GDD-LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119 Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165 ++D +L HR H A+ + I G T Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237 Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252 E G + V LA+ + + Sbjct: 238 EAGIVLDSVQDSENFTTLAVIKFSAAQKELT 268 >gi|78066664|ref|YP_369433.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. 383] gi|77967409|gb|ABB08789.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. 383] Length = 344 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLGSFLTWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 +L + + + ++ +L + LR+ Sbjct: 93 HGVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVRDVLSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L ++ + + L Sbjct: 152 GVHVKVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALGSSLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 I G + P D++ ++ KGCY GQE+V+R Q+R I++R Sbjct: 209 IRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|172060853|ref|YP_001808505.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MC40-6] gi|171993370|gb|ACB64289.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MC40-6] Length = 344 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 +L + + + ++ +L + LR+ Sbjct: 93 HGVQLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVREALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPSVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGIELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|53719070|ref|YP_108056.1| hypothetical protein BPSL1434 [Burkholderia pseudomallei K96243] gi|238563338|ref|ZP_00439040.2| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4] gi|52209484|emb|CAH35436.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|238520913|gb|EEP84369.1| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4] Length = 317 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 8 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 67 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 68 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 126 Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153 R A W + L + G Sbjct: 127 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 186 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211 + P D++ G++ KGCY GQEVV+R Q+R I++R + Sbjct: 187 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 245 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 246 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 281 >gi|292490833|ref|YP_003526272.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4] gi|291579428|gb|ADE13885.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4] Length = 345 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 123/309 (39%), Gaps = 46/309 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I + G+ A LQ ++T D+ + + ++ + + P+G++L + + + + Sbjct: 39 TDLSHLGLIALTGEDASTLLQNVLTNDIGEVNAQRSQLTGLCNPKGRLLAILRLFQWDTN 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTF 110 F L + S ++++ KL Y LR+ V + +Q + + + T Sbjct: 99 -FYLSLPHSLLEAVLKKLNMYVLRAQVSLIDASEQYCCLGLAGLQASDELRHCLGKAPTA 157 Query: 111 SNSSFI------------DERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154 N + RF + L + W K A + T + I GI Sbjct: 158 VNEVYQTSSCCVLRVPGDPPRFEVVGEFDALQKLWSKLSKTAVPVGTHFWELATIRAGIA 217 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213 + + P ++L G+S TKGCY GQEVV+R+ +R +R + TD Sbjct: 218 TIYPE-TQESFIPQQVNLELTEGVSFTKGCYPGQEVVARMHYRGKPSRRMFLAHMITDKR 276 Query: 214 PPSGSPIL-TDDIEIGTLGVVV--------GKKALAIARIDKVDHA-----IKKGMALTV 259 P G P+ D E T+G +V G +L + ++ ++ G LT+ Sbjct: 277 PQPGDPVYLADGKEGQTVGEIVAAQPAPEGGYDSLVVLQLASLEKGDMVWNSGNGPELTL 336 Query: 260 HGVRVKASF 268 + + Sbjct: 337 RELPYELGK 345 >gi|83718935|ref|YP_442673.1| glycine cleavage T-protein superfamily protein [Burkholderia thailandensis E264] gi|257138886|ref|ZP_05587148.1| glycine cleavage T-protein superfamily protein [Burkholderia thailandensis E264] gi|83652760|gb|ABC36823.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis E264] Length = 348 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 101/301 (33%), Gaps = 39/301 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFDALPDGIHT 159 Query: 119 ----------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVD 155 R A W + L + G Sbjct: 160 KVDAPAGALVRLPDAAGRARYLWIAARAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213 + P D++ G++ KGCY GQEVV+R Q+R I++R + D Sbjct: 220 VTLPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDA 278 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKASF 268 +G + D G++V A +D + A++ G L G Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDALVEIKLAALESGSVHLASAGGPALTFL 338 Query: 269 P 269 P Sbjct: 339 P 339 >gi|293390940|ref|ZP_06635274.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951474|gb|EFE01593.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 295 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 11/242 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ + I++ G A +LQ +T DV L + +A P+GK+ F + + +E Sbjct: 15 CPLSHYTLIEMAGVDAEKYLQGQLTCDVTKLAAGESTLTAHCDPKGKMSALFRLIRQDEQ 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 TF + + S +D+L Y + S V + + + R ++ Sbjct: 75 TFYMLLKSELLPSALDQLKKYAVFSKVTFTPLDWQIIGAAGAKGIEKCGQISAQIRVAVN 134 Query: 124 DVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGI 178 D + +++ ++ + L I G+ P + + I Sbjct: 135 DRQPRVILLNPTRLSIEPTAEANVWDLLDIQDGVP-GLAVATQLQFIPQALNLQSIEQAI 193 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI---LTDD-IEIGTLGVV 233 S KGCYIGQE V+R ++R ++ I T+ LP GSP+ L D+ GT+ Sbjct: 194 SFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPLEMALGDNWRSTGTIISA 253 Query: 234 VG 235 V Sbjct: 254 VN 255 >gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC] gi|330825752|ref|YP_004389055.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601] gi|317116888|gb|ADU99376.1| folate-binding protein YgfZ [Alicycliphilus denitrificans BC] gi|329311124|gb|AEB85539.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601] Length = 313 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 22/264 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I+V G+ A FL +T D L + AR +A LT +G++L F+ K + Sbjct: 17 TRLSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIAFKRNDA 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L R + +L + LR+ + + + + + E ++ Sbjct: 77 EVLLVCARELLAPTLKRLSMFVLRAKARLSDATDDFALYGLLGDAARAVLPEGGEPWAKI 136 Query: 124 D-------------------VLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPS 163 D L T G A D + + GI T + Sbjct: 137 DLGEASVVQLYPADGQPRALWLAPATAGSAPAGAPLDESLWLWSEVRSGIA-TLTAPVAE 195 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + + G++ KGCY GQEVV+R Q R +++R + + +G+ + + Sbjct: 196 AFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAI-AAGAEVFAE 254 Query: 224 DIEIGTLGVVVGKKALAIARIDKV 247 +G VV A +D + Sbjct: 255 GDAEQPVGTVVQAAAAPGGGVDAL 278 >gi|24372450|ref|NP_716492.1| hypothetical protein SO_0861 [Shewanella oneidensis MR-1] gi|24346433|gb|AAN53937.1|AE015531_3 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 318 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 21/230 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +TAD+ +L R A P+GK+L F I + Sbjct: 21 LANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTI-K 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106 D +L + + + + +L Y + S + +L Q Sbjct: 80 DALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQ 139 Query: 107 EHTFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 E T + I +RF + + E D + L I G + + Sbjct: 140 ELTLTEHGAILKDADRFILVLQPQAASALIAEHTVFDASAWQALEIAAGYPNLAPSHA-N 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|237807613|ref|YP_002892053.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187] gi|237499874|gb|ACQ92467.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187] Length = 299 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 13/243 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +L + + I++ G A+ +L +T DV+ L + A TP+GK+L F + K E Sbjct: 13 SVYHLDDITVIRLEGPDAVKYLNGQVTCDVMALNPGQSILGAHCTPKGKVLAVFRLFKRE 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII----EIQPINGVVLSWNQEHTFSNSSFID 117 +D +L + + + +L Y + S V I + + G+ + + + Sbjct: 73 QD-LLLIYKKELTEIQLAELKKYAVFSKVTITDVSDQFDVFGIAGTGTDAWLATGPGADN 131 Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 + I + + + L I G+ + + P + Sbjct: 132 IQCQINPDRWLILSEKQQPLELKLPECPATDWRGLDILDGLPQFGKN-AQAEFIPQAFNL 190 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 L+GIS TKGCY GQE+V+R ++R + I+ GT P + + ++ + +IG Sbjct: 191 QALHGISFTKGCYTGQEIVARAKYRGTNNRALFILKGTSGQPVNTNTVI--ERQIGEQWR 248 Query: 233 VVG 235 V G Sbjct: 249 VSG 251 >gi|120612067|ref|YP_971745.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax citrulli AAC00-1] gi|120590531|gb|ABM33971.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax citrulli AAC00-1] Length = 304 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 23/280 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ ++ + Sbjct: 8 LAPLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRVGD 67 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106 +L R ++ +L + LR+ + + + W++ Sbjct: 68 AEVLLVCSRDVLAPVLKRLSMFVLRAKARLTDATADFALWGLAGDAVAAVAGEALPPWSR 127 Query: 107 EHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPS 163 + T + + A LL + G + + + G+ + Sbjct: 128 QDTPQGTVVHLYPGAGQARALLAQPTGQPAPSGPALAPGLWEWGEVQSGVATLTAPLV-E 186 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + + G++ KGCY GQEVV+R Q R +++R + + + G+ + Sbjct: 187 LFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPEAI-TVGAEVFAA 245 Query: 224 DIEIGTLGVVVGKKALAIARIDK--VDHAIKKGMALTVHG 261 G VV A D G AL V G Sbjct: 246 SDAEQPCGTVVQAAAAPGGGFDALVALQVASTGEALRVGG 285 >gi|148555647|ref|YP_001263229.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] gi|148500837|gb|ABQ69091.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] Length = 222 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS LS+++ I++ G+ A FLQ ++T+DV + + +LTPQGK L F++ Sbjct: 1 MSGTTLSDRALIRLSGQGARDFLQGLVTSDVAG---PLPVWAGLLTPQGKALFDFIVWAD 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +D +++ + + D+L +L+ Y+LR I I G+ + W + D R Sbjct: 58 GDD-LLIDCEAEQADALAKRLMLYRLRK--PIAIARDEGLAVHWAPDG---ERGAPDPRL 111 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + L R + A +H R G+ + + + DLLNG+S Sbjct: 112 A---ALGRRWIASADGAAEG---WHAHRRALGVPEGVAEIGSDRNLWLECNADLLNGVSF 165 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207 KGCY+GQE +R+ R + +R +++ Sbjct: 166 AKGCYVGQENTARMNWRAKVNRRLVML 192 >gi|187478257|ref|YP_786281.1| aminomethyl transferase [Bordetella avium 197N] gi|115422843|emb|CAJ49371.1| putative aminomethyl transferase [Bordetella avium 197N] Length = 319 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 112/299 (37%), Gaps = 40/299 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L I G A+ FL +T DV L AR + T +G++L LI + + Sbjct: 17 AALPGLRVISAAGPDALGFLHGQLTQDVNGLAADGARLAGYCTAKGRLLATLLIWRASPE 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSFIDE 118 + + ++L+ +L + LR+ + I + ++ +S +H T + + Sbjct: 77 SVHALVRADLAEALVKRLSMFVLRAKLKISLTDLSVAGVSAGPDHLDALGTAAGGALPST 136 Query: 119 RFSIAD-------------VLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDP 156 ++ AD + G + +D +++ + G+ Sbjct: 137 AWARADLSSGTWIAAPGNNLRWWWVAGAGQMQGQALRALLSEADEESWRAADLAAGLP-W 195 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P ++L+ G+S TKGCY GQEVV+R +R +++R +P + Sbjct: 196 IAKATQDLFIPQTVNLELIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVSALPVPAA 255 Query: 217 GSPILTD---DIEIGTLGVVV--GKKA-------LAIARIDKVDHAIKKGMALTVHGVR 263 G I D +G + G A LA D++ G A+T+ + Sbjct: 256 GLDIYDASQPDEPVGRIVDAARDGDHASLLFETTLAALPADQLRVGAPDGPAITLRDLP 314 >gi|91783550|ref|YP_558756.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia xenovorans LB400] gi|91687504|gb|ABE30704.1| Putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia xenovorans LB400] Length = 361 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 97/267 (36%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L+ I G A FL +T D L AR + + +G++L FL + Sbjct: 50 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAASARLAGYCSAKGRLLASFLTWR-S 108 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + + ++ +L + LR+ + V+ + + S D Sbjct: 109 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPD 168 Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151 R A L W G +I S + + L I Sbjct: 169 GVHVKVDGAAGSLIRVPDALGRLRYLWVGPKAQIESQLALLDETLKRVSPAVWDWLDIRA 228 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 229 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLATVAG 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D +G+ + D G+VV Sbjct: 288 EPDTVRAGAELFHSDDPGQPCGMVVNA 314 >gi|322492231|emb|CBZ27505.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 389 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 110/371 (29%), Gaps = 105/371 (28%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 L ++ ++V G A FLQ I T D+ L + L G++L + Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRDLHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS--- 114 + ++++ L D L K+R V I ++ V+ + S Sbjct: 69 HEGQAAILVDVHERSAAGLFDHLTEMKMRKKVRIDDVGKELVVLAVLEDMSADAQRSGNS 128 Query: 115 --------------------------FIDERFSIADVLLHRTWGHNEKIASDIKT----- 143 F D R D L R + A+ Sbjct: 129 ASGCDARASSVTSLSRETLEEQHTECFPDPR---NDALFPRLPPPSSPTAASDSVDMAAA 185 Query: 144 ----------------------------------------YHELRINHGIVDPNTDFLPS 163 Y L + GI + F + Sbjct: 186 SATAAPPSASPPPAVTPPNWFLRRCVVPATWAPPLSSPDPYTTLLYSRGIGEGPDVFKHN 245 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPIL 221 P + +D L G+S KGCY+GQE+ R + RKR + + PP+ I Sbjct: 246 KSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGTIT 305 Query: 222 TDD-------------------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HG 261 + +IG + V G + + R+ VD A + L + G Sbjct: 306 DEGAVATTRPVEVGEPLYSSAREKIGEVTGVCGHVGIGLFRLRYVDKATQTVPGLQLKDG 365 Query: 262 VRVKASFPHWY 272 V+ P W+ Sbjct: 366 TPVRTHLPDWW 376 >gi|325526814|gb|EGD04311.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. TJI49] Length = 266 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 40/269 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+ I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHGV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91 +L + + + ++ +L + LR+ V Sbjct: 62 RLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ ++ R + D + G ++ + + L + Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWVGPRDEV-DARMAALAGKLPVVSPAVWDW--LDVRA 177 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G + P D++ ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAG 236 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 D +G + D G++V A Sbjct: 237 DTDTVHAGVELFHSDDPGQPCGMIVNAAA 265 >gi|222111181|ref|YP_002553445.1| folate-binding protein ygfz [Acidovorax ebreus TPSY] gi|221730625|gb|ACM33445.1| folate-binding protein YgfZ [Acidovorax ebreus TPSY] Length = 311 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 106/289 (36%), Gaps = 31/289 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS+ I+V G+ A FL +T D L AR +A LT +G++ F+ K E Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121 +L R + +L + +R+ + + + + + + + Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRAKAKLTDATGDFALYGLLGDAARAVLPAGEPWAKAD 136 Query: 122 IADVLLHRTWGHNEKIAS----------------DIKTYHELRINHGIVDPNTDFLPSTI 165 + D + + + + + + + GI T + Sbjct: 137 VGDASVVQLYPAEGQPRALWVAPAGSAAPAGAALTEALWLWSEVRSGIA-TLTAPVVEAF 195 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + + G++ KGCY GQEVV+R Q R +++R + + G+ + D Sbjct: 196 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGD 254 Query: 226 EIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G VV G AL +I A++ G A GV + Sbjct: 255 AEQPVGTVVQVATAPTGGVDALVSLQIAATGGALRVGAA---DGVALTL 300 >gi|317035207|ref|XP_001401302.2| transferase caf17 [Aspergillus niger CBS 513.88] Length = 445 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 133/363 (36%), Gaps = 92/363 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + +LQ +IT D + +A L QG++L Sbjct: 46 YARLTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAF 105 Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106 + + +E +++E+D+S+ SL+ L +KLR+ + + V SW Sbjct: 106 LYPLPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASWKD 165 Query: 107 EHTFSNSSF--------------------IDERFS----------IADVLLHRTWGHNEK 136 +++ +D R D+ H E Sbjct: 166 HSEPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEG 225 Query: 137 IAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R Sbjct: 226 YGSEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRT 285 Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230 H ++RKR + + + +LPPSGS I G Sbjct: 286 HHTGVVRKRILPVQLYEGSLGDLESADMPVYDPSVEVELPPSGSNISKVSARKGRSAGKF 345 Query: 231 GVVVGKKALAIARID--------------------KVDHAIKKGMALTVHGVRVKASFPH 270 VG LA+ R++ KV + + V++KA P Sbjct: 346 LGGVGNIGLALCRLEMMTDVALTGEGTQYSPDQEFKVSWTGAEDGSSESGEVKLKALVPA 405 Query: 271 WYK 273 W + Sbjct: 406 WTR 408 >gi|170090854|ref|XP_001876649.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648142|gb|EDR12385.1| predicted protein [Laccaria bicolor S238N-H82] Length = 370 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 121/346 (34%), Gaps = 77/346 (22%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--- 59 + N+ I V G A FL ++++ + ++ SA+L QG++L + Sbjct: 15 LAPIPNRGIISVFGSQAFSFLNGLLSSSIGP-QDNGSQFSAVLNAQGRVLYDVFLYPSTN 73 Query: 60 -IEEDTFILEIDR--SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSF 115 + + LE D S+ L+ L + LRS V + ++ + SW + Sbjct: 74 SAGKPGYFLEYDNRLSEAPPLLSYLKRHILRSKVQVRDVSEDYTLWASWGATEDQVWETQ 133 Query: 116 IDERFSIADVL-------LHRTWGHNEKI----------------------------ASD 140 ++ + L + WG +E I D Sbjct: 134 RQWSWARSGALEPVWDNPTYSPWGTDENIIHDRRAVGMGRRHLLKADQGSKVLRDYETVD 193 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + Y RI HG+ + N D T FP D+ +D + G+ KGCY+GQE+ R H II Sbjct: 194 SEAYLLHRIIHGVPEGNMDIPAMTAFPMDSNLDAMGGLDFRKGCYVGQELTVRTYHTGII 253 Query: 201 RKRPMII--TGTDDLPPSGSPILTD------------------DIEI------GTLGVVV 234 RKR + D+ P + + + I G L Sbjct: 254 RKRTFPVLLHKPDENPEDITSLTSHAFPSNIDIRPSVKSRGDISRPISRPRGTGKLLSTA 313 Query: 235 GKKALAIARIDKVDHAIKKGMALTV----HGV----RVKASFPHWY 272 LA+ R++ V + L + G V +P W+ Sbjct: 314 QGVGLALLRLEHVAGVQNGDLDLQIEIPEGGRTSMWSVSPWWPSWW 359 >gi|221198168|ref|ZP_03571214.1| glycine cleavage T protein [Burkholderia multivorans CGD2M] gi|221208341|ref|ZP_03581344.1| glycine cleavage T protein [Burkholderia multivorans CGD2] gi|221171754|gb|EEE04198.1| glycine cleavage T protein [Burkholderia multivorans CGD2] gi|221182100|gb|EEE14501.1| glycine cleavage T protein [Burkholderia multivorans CGD2M] Length = 310 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 102/278 (36%), Gaps = 40/278 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+ I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91 +L + + + ++ +L + LR+ V Sbjct: 62 RLL-VSKDIQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDALSGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ +I R + D L G ++ + + L + Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D++ ++ KGCY GQEVV+R Q+R I++R + Sbjct: 178 GEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAA 236 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 237 DTDTMHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|240113196|ref|ZP_04727686.1| hypothetical protein NgonM_06426 [Neisseria gonorrhoeae MS11] Length = 287 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 22/268 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +V G+ FL ++ D+ L A + TP+G+++ ++ +D Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 +L + + ++ + +L + LR+ + EI V + + + S Sbjct: 63 -LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121 Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 ++D +L HR H A+ + I G T Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252 + V LA+ + + Sbjct: 240 IVLDSVQDSENFTTLAVIKFSAAQKELT 267 >gi|167622662|ref|YP_001672956.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella halifaxensis HAW-EB4] gi|167352684|gb|ABZ75297.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 23/263 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I V G+ F+ +T D+ +L R A P+GK+L F DT Sbjct: 24 LTHLGLISVTGEQGRSFIHGQVTTDISSLESDQWRWGAHCDPKGKMLASFRTFAKG-DTL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----------NSS 114 L + + + +L Y + S + + ++L E + + Sbjct: 83 FLMMPKETLALDLPQLQKYAVFSKAELSDASDHWLLLGVAGEQAKTWLTAQFGELTDELT 142 Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164 ID I D ++ AS D + L I G + + Sbjct: 143 LIDNGMIIHDAGRFILAIEQDQAASLISAIEQPIYDATAWQALEIAAGYPNLGANH-QGQ 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY+GQE ++R+++R ++ I++GT P + L Sbjct: 202 FVPQMCNVQAVNGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSTPLTADSQLEIA 261 Query: 225 IEIGTLGVVVGKKALAIARIDKV 247 +E G G A+ R D+V Sbjct: 262 LEDGEGFRRAGTIIEAVQRGDQV 284 >gi|261867315|ref|YP_003255237.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412647|gb|ACX82018.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 295 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 11/225 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ + I++ G A +LQ +T DV L + +A P+GK+ F + + +E Sbjct: 15 CPLSHYTLIEMAGVDAEKYLQGQLTCDVTKLAAGESTLTAHCDPKGKMSALFRLIRQDEQ 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFS 121 TF + + S +D+L Y + S V P++ ++ I R + Sbjct: 75 TFYMLLKSELLPSALDQLKKYAVFSKVTF--TPLDWQIIGAAGAKGIEKYGQISAQIRVA 132 Query: 122 IADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLN 176 + D + +++ ++ + L I G+ P + + Sbjct: 133 VNDRQPRVILLNPTRLSIEPTAEANVWDLLDIQDGVP-GLAVATQLQFIPQALNLQSIEQ 191 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220 IS KGCYIGQE V+R ++R ++ I T+ LP GSP+ Sbjct: 192 AISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236 >gi|158512851|sp|A2R472|CAF17_ASPNC RecName: Full=Putative transferase caf17, mitochondrial; Flags: Precursor gi|134081987|emb|CAK46672.1| unnamed protein product [Aspergillus niger] Length = 444 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 133/363 (36%), Gaps = 92/363 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56 L+N+ I + G + +LQ +IT D + +A L QG++L Sbjct: 45 YARLTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAF 104 Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106 + + +E +++E+D+S+ SL+ L +KLR+ + + V SW Sbjct: 105 LYPLPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASWKD 164 Query: 107 EHTFSNSSF--------------------IDERFS----------IADVLLHRTWGHNEK 136 +++ +D R D+ H E Sbjct: 165 HSEPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEG 224 Query: 137 IAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R Sbjct: 225 YGSEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRT 284 Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230 H ++RKR + + + +LPPSGS I G Sbjct: 285 HHTGVVRKRILPVQLYEGSLGDLESADMPVYDPSVEVELPPSGSNISKVSARKGRSAGKF 344 Query: 231 GVVVGKKALAIARID--------------------KVDHAIKKGMALTVHGVRVKASFPH 270 VG LA+ R++ KV + + V++KA P Sbjct: 345 LGGVGNIGLALCRLEMMTDVALTGEGTQYSPDQEFKVSWTGAEDGSSESGEVKLKALVPA 404 Query: 271 WYK 273 W + Sbjct: 405 WTR 407 >gi|121594085|ref|YP_985981.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax sp. JS42] gi|120606165|gb|ABM41905.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax sp. JS42] Length = 311 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 106/289 (36%), Gaps = 31/289 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS+ I+V G+ A FL +T D L AR +A LT +G++ F+ K E Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121 +L R + +L + +R+ + + + + + + + Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRAKAKLTDATGDFALYGLLGDAARAVLPAGEPWAKAD 136 Query: 122 IADVLLHRTWGHNEKIAS----------------DIKTYHELRINHGIVDPNTDFLPSTI 165 + D + + + + + + + GI T + Sbjct: 137 VGDASVVQLYPAEGQPRALWVAPAGSAAPAGAALTEALWLWSEVRSGIA-TLTAPVVEAF 195 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + + G++ KGCY GQEVV+R Q R +++R + + G+ + D Sbjct: 196 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGD 254 Query: 226 EIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G VV G AL +I A++ G A GV + Sbjct: 255 AEQPVGTVVQVAAAPTGGVDALVSLQIAATGGALRVGAA---DGVALTL 300 >gi|170703704|ref|ZP_02894430.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria IOP40-10] gi|170131386|gb|EDS99987.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria IOP40-10] Length = 310 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 99/278 (35%), Gaps = 40/278 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 2 PLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91 +L + + + ++ +L + LRS V Sbjct: 62 QLL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ +I R + D L G ++ + + L + Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G + P D++ ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAG 236 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 237 ETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|161524552|ref|YP_001579564.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616] gi|189350692|ref|YP_001946320.1| putative aminomethyltransferase [Burkholderia multivorans ATCC 17616] gi|160341981|gb|ABX15067.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616] gi|189334714|dbj|BAG43784.1| predicted aminomethyltransferase [Burkholderia multivorans ATCC 17616] Length = 345 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 104/281 (37%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L+ I V G A FL + +T D+ L AR S +P+G++L FL + Sbjct: 34 AYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 93 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 94 HDVRLL-VSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPD 152 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ G ++ +I R + D L G ++ + + L Sbjct: 153 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALDGKLPVVSPAVWDW--LD 209 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G T + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 210 VRAGEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 268 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + D +G + D G++V A +D + Sbjct: 269 VAADTDTVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 309 >gi|115351883|ref|YP_773722.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria AMMD] gi|115281871|gb|ABI87388.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria AMMD] Length = 344 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 40/281 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------------ 91 +L + + + ++ +L + LR+ Sbjct: 93 HGVQLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVREALSGIFDALPD 151 Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 +++ G ++ +I R + D L G ++ + + L Sbjct: 152 GMHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 + G + P D++ ++ KGCY GQEVV+R Q+R I++R Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 + G D +G + D G++V A +D + Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308 >gi|167581611|ref|ZP_02374485.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis TXDOH] Length = 348 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 101/301 (33%), Gaps = 39/301 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 +L + + + ++ +L + LR+ + V + + + S D Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGLAGDVRAALSGIFDALPDGIHT 159 Query: 119 ----------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVD 155 R A W + L + G Sbjct: 160 KVDAPAGALVRLPDAAGRARYLWIAARAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213 + P D++ G++ KGCY GQEVV+R Q+R I++R + D Sbjct: 220 VTLPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDA 278 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKASF 268 +G + D G++V A + +D + A++ G L G Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPESGVDALVEIKLAALESGSVHLASAGGPALTFL 338 Query: 269 P 269 P Sbjct: 339 P 339 >gi|71753323|ref|XP_826136.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62359621|gb|AAX80054.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 316 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 109/304 (35%), Gaps = 54/304 (17%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED--TFILEIDRSKRDSL 77 LQ + T D+ L + L G+++ + + E T ++++ D+L Sbjct: 1 LQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPEGQVTIMIDVHCGVADTL 60 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLS---------------------------WNQEHTF 110 ++ L Y++R + I VV++ +QE + Sbjct: 61 LEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNAGSSPSSSSATYGGDQELSG 120 Query: 111 SNS---------SFIDERFSIADVLLHRTWGH---NEKIASDIKTYHELRINHGIVDPNT 158 +F D R L + K Y + G+ + Sbjct: 121 PQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSEKLYKKFLYAAGVGEGPE 180 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----- 213 F PS P +A DLL G+S KGCY+GQE+ R + RKR + + +L Sbjct: 181 VFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTRKRTVPLFLQGELFDGKG 240 Query: 214 ----PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASF 268 P ++ + ++G + G L + R++ VD + L++ G V A Sbjct: 241 GEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTRSFPGLSLSDGTTVDARI 300 Query: 269 PHWY 272 P W+ Sbjct: 301 PEWW 304 >gi|165975514|ref|YP_001651107.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250536|ref|ZP_07336733.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251880|ref|ZP_07338051.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|165875615|gb|ABY68663.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649310|gb|EFL79495.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650524|gb|EFL80683.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 295 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 22/278 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS I++ G A +LQ +T DV L + P+GK+ + + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119 D FI I +++L Y + S V PI GV N ++ + + Sbjct: 76 DKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 + WG + +D + + + I GI + P + + N I Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAI 190 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVV 234 S +KGCYIGQE V+R ++R ++ + G D LP G + ++++G Sbjct: 191 SFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRAT 247 Query: 235 GKKALAIARIDKV------DHAIKKGMALTVHGVRVKA 266 G ++A +K+ ++ ++ A ++GV + Sbjct: 248 GTILNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 285 >gi|167586963|ref|ZP_02379351.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ubonensis Bu] Length = 344 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 108/308 (35%), Gaps = 45/308 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I V G A FL +T D+ L AR + +P+G++L F+ + Sbjct: 33 AYMPLPQFGVIDVAGDDAATFLHTQLTNDIEHLDAASARLAGYCSPKGRLLASFVAWRSG 92 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89 D +L + + + ++ +L + LR+ Sbjct: 93 HDVRLL-VSKDVQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRAALSGIFDALPD 151 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 V ++I G ++ +I R + D L G ++ + + L Sbjct: 152 GVHVKIDGPAGALIRMPDAAGKRRYLWIGPRAEV-DARLAALDGKLPAVSPAVWDW--LD 208 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 I G T P D++ ++ KGCY GQE+V+R Q+R I++R Sbjct: 209 IRAGEPR-VTQPAVEQFVPQMINFDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAH 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHG 261 G D +G + D G+VV A +D + A++ G L Sbjct: 268 AAGDTDAVRAGIELFHSDDPSQPCGMVVNAAAAPAGGVDALVEIKLAALESGSVHLGAAD 327 Query: 262 VRVKASFP 269 A P Sbjct: 328 GPALAFEP 335 >gi|88607941|ref|YP_505789.1| aminomethyl transferase family protein [Anaplasma phagocytophilum HZ] gi|88599004|gb|ABD44474.1| aminomethyl transferase family protein [Anaplasma phagocytophilum HZ] Length = 275 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 24/279 (8%) Query: 5 YLS-NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +LS ++ IKV G A FL I T DVL + A + IL +G+ L F + K ++ Sbjct: 2 FLSQSRGVIKVSGADAAKFLHNITTNDVLQMESPSAVYNLILNSKGRFLFDFFLIKCDK- 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114 F+L+ +R +I+ L Y++ V I+ V L Q + Sbjct: 61 HFLLDCEREAIMPIIELLRLYRVVLKVKIKSCDEYSVALDTKQRLGDPGYTKTLEDGTIV 120 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPH 168 F D R ++ + H + D+ T Y LR+ + I + TD + FP Sbjct: 121 FQDPR--CVNMGVRYIVPHTSSVQYDMPTSQTNTEYSMLRMVNTIPNCATDMVSGESFPL 178 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPPSGSPILTDDIEI 227 +D LN IS TKGCY GQEVV+R+ + R + LP +G I + + Sbjct: 179 HFGLDKLNAISHTKGCYTGQEVVARMHRIGAKKTLRTVFSESGISLPQTG-EIFVNQQCV 237 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + L + K+ + L++ +++ Sbjct: 238 GEMITSTENWGLCMLETSKLPTGY---VDLSIGDIKLTL 273 >gi|224826501|ref|ZP_03699602.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002] gi|224601102|gb|EEG07284.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002] Length = 325 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 38/276 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ S I+V G+ A FLQ +++D+ + ++ S+ +G++L FLI + D Sbjct: 26 CSMAHFSIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRVLGNFLIWQFRGD 85 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WN 105 F+L + +L +L + LRS V +E+ ++ Sbjct: 86 YFLL-VSADIATALCRRLSMFVLRSEVKLEVLAEPWLLAGVKGGGAEAVLKDVFTEVPAQ 144 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDP 156 +N S R ++LL + I S ++ + L I G+ Sbjct: 145 PHDVIANESGAIIRLPAGNLLLSYDASASGSIKSRLEQACRQVGVEAWSLLDIAAGVP-W 203 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 T P MD+L GIS KGCY GQE+V+R Q+ +++R + P Sbjct: 204 VTRPTQEQFVPQMINMDVLGGISFKKGCYPGQEIVARTQYLGKVKRRLFRVELPVKASP- 262 Query: 217 GSPILT---DDIEIG-TLGVVVGKKA----LAIARI 244 G P+ + D IG + + LA+A++ Sbjct: 263 GDPLYSPATGDQAIGMIVNTGCDQHGALVALAVAQL 298 >gi|296157857|ref|ZP_06840691.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1] gi|295892103|gb|EFG71887.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1] Length = 357 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L+ I G A FL +T D L AR + + +G++L FL + Sbjct: 46 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 104 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + + ++ +L + LR+ + V+ + + S D Sbjct: 105 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPD 164 Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151 R A L W G +I + + L I Sbjct: 165 GVHVKVDGAAGSLIRVPDALGRLRYLWVGPKAQIEPQLALLDETLKRVSPAVWDWLDIRA 224 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 225 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 283 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D +G+ + D G+VV Sbjct: 284 EPDSVRAGAELFHSDDPGQPCGMVVNA 310 >gi|87198956|ref|YP_496213.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444] gi|87134637|gb|ABD25379.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444] Length = 248 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 14/218 (6%) Query: 2 SSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 L +++ +++ + FLQ ++T DV + + +A+LTPQGK+L F++ Sbjct: 5 PGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGV---LPVWTALLTPQGKVLFDFIV 61 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + +LE + S D+L +L Y+LR I I + + W +S D Sbjct: 62 WP-DGKGLLLECEASAADALAKRLTLYRLRRK--IAISRADDLAAHWEDHPGDGGAS--D 116 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 R N+ + D+ Y E R+ G+ + + + + LNG Sbjct: 117 PRLRALGQRWIAPVSDND-VGVDM-AYREHRLKLGVPEGRAELGDGEVLWLECNAADLNG 174 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 +S TKGCY+GQE +R+ R + +R +++ P Sbjct: 175 VSFTKGCYVGQENTARMNWRQKVNRRLIVVPLEQSDPA 212 >gi|251793343|ref|YP_003008071.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus NJ8700] gi|247534738|gb|ACS97984.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus NJ8700] Length = 295 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 11/245 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + + I++ G A +LQ +T DV L + +A P+GK+ F + + +E Sbjct: 15 CPLEHYTLIEIAGTDAEKYLQGQLTCDVTKLAGGESTLTAHCDPKGKMSALFRLIRQDEQ 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----HTFSNSSFIDER 119 TF + + + S +D+L Y + S V + + + + FS +D + Sbjct: 75 TFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRVDVK 134 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGI 178 ++L + + + + L I G+ P + + I Sbjct: 135 TQQPRIILLHPTRLALEPTVEAEAWDLLDIQDGVPSLAA-ATQLEFIPQALNLQSIERAI 193 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGS--PILTDD--IEIGTLGVV 233 S KGCYIGQE V+R ++R ++ I T LP GS + D GT+ Sbjct: 194 SFQKGCYIGQETVARAKYRGANKRALFIFAARTQSLPDIGSALEMALGDNWRATGTITSA 253 Query: 234 VGKKA 238 V Sbjct: 254 VNFHG 258 >gi|85373394|ref|YP_457456.1| aminomethyltransferase [Erythrobacter litoralis HTCC2594] gi|84786477|gb|ABC62659.1| predicted aminomethyltransferase [Erythrobacter litoralis HTCC2594] Length = 246 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 28/251 (11%) Query: 2 SSVYLSNQSFIKVCGKSA----IPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFL 56 + L +++ I++ A FLQ ++T DV TLP + +LTPQGK L F+ Sbjct: 6 TPTRLFDRAVIRLSPSDASGDVADFLQGLVTNDVKGTLPA----YAGLLTPQGKALFDFI 61 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + + +++ + D +L Y+LR IEI + V + W + + Sbjct: 62 VWPSGKGELLVDCEADLADEFAKRLSLYRLRRK--IEIARDDSVAVHWQPH--IGDGAAN 117 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D R AD+ ++ S + + + R++ G+ + + I + LN Sbjct: 118 DPRL--ADLGQRWLAPVSDADESADEAWRKHRLSLGVPEGRAEM--GDILWLETNAVELN 173 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 G+S KGCY+GQE +R+ R I +R +++ D+ I +G Sbjct: 174 GVSFGKGCYVGQENTARMNWRQKINRRLVVVPLD----------TADEKRIKARHEDLG- 222 Query: 237 KALAIARIDKV 247 A++ RID + Sbjct: 223 LAISHLRIDDI 233 >gi|294669214|ref|ZP_06734294.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308846|gb|EFE50089.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 21/261 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I+V G+ FL ++ + L A + TP+G+++ L+ Sbjct: 37 MHTSALPFFGLIRVSGEDRASFLHGQLSNHIEGLAEGEACYATYNTPKGRVIANMLVFNR 96 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ED + ++L +L + LR+ + E P G N+ ++ F Sbjct: 97 GEDLLL-LTAADLVEALCKRLRMFVLRAKAVFEPLPGYGAAGRLNEGAPALPAAEPHLSF 155 Query: 121 SIA--DVLLHRTWGHNEKI------------ASDIKTYHELRINHGIVDPNTDFLPSTIF 166 A D L+ T H + A + I G ++ + Sbjct: 156 PFAVSDGLIECTLPHGGILLAGEKDTLPAYDAEAENAWQLHEIRSGYP-WISEATKESCV 214 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 + G+ KGCY GQE+++R Q+R +++ ++ G+ L +G +L D E Sbjct: 215 AQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLLGS-SLEAAGIAVLQDGAE 273 Query: 227 IG----TLGVVVGKKALAIAR 243 G T G +LA+ + Sbjct: 274 AGIIINTACTAEGSLSLAVIK 294 >gi|46143319|ref|ZP_00204442.1| COG0354: Predicted aminomethyltransferase related to GcvT [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207545|ref|YP_001052770.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae L20] gi|190149326|ref|YP_001967851.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|126096337|gb|ABN73165.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189914457|gb|ACE60709.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 295 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 13/226 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS I++ G A +LQ +T DV L + P+GK+ + + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119 D FI I +++L Y + S V PI GV N ++ + + Sbjct: 76 DKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 + WG + +D + + + I GI + P + + N I Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAI 190 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 S +KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 191 SFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 236 >gi|114048794|ref|YP_739344.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-7] gi|113890236|gb|ABI44287.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-7] Length = 318 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 26/252 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+ Sbjct: 21 LANLSHLGLIKVVGEQGRSFMHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ- 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111 D ++ + + + + +L Y + S + +L E Sbjct: 80 DALLMLMPKDTLELDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQAVPFVTQHFGEITE 139 Query: 112 ------NSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + +RF + T E D + L I G + + Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPI 220 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L +G I Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSLNINLETGIEI 258 Query: 221 LTDD--IEIGTL 230 +D + G + Sbjct: 259 ELEDGYRKGGQI 270 >gi|329850297|ref|ZP_08265142.1| glycine cleavage T-protein C-terminal barrel domain protein [Asticcacaulis biprosthecum C19] gi|328840612|gb|EGF90183.1| glycine cleavage T-protein C-terminal barrel domain protein [Asticcacaulis biprosthecum C19] Length = 218 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 13/221 (5%) Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 + L+S D L++ ++ R+ L+ KL Y+LR+ V I+ + V +++ Sbjct: 1 MYADCLLSPRSADEVWLDVPQTAREELVAKLNMYRLRAKVTIDALDLP-VYAAFDG--PM 57 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + +G A+D + R ++G+ + TDF ++ DA Sbjct: 58 PEGFASDPRSEVIGADFSFAYGPQTPNATD---WAAFRYSYGLAEAGTDFAKDELYAIDA 114 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 +DLLNGI KGCY+GQE+ SR++ R I+ R + + LPP G+ +L + G + Sbjct: 115 NLDLLNGIDFKKGCYVGQELTSRMKRRGQIKNRILPLRHAGHLPP-GAEVLNGERRAGEV 173 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 + +LA+ R+D++D LT G + + P W Sbjct: 174 LASIDGNSLALMRLDRLDG------ELTCDGHTLNLTIPDW 208 >gi|221215089|ref|ZP_03588056.1| glycine cleavage T protein [Burkholderia multivorans CGD1] gi|221165025|gb|EED97504.1| glycine cleavage T protein [Burkholderia multivorans CGD1] Length = 310 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 101/278 (36%), Gaps = 40/278 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L I V G A FL + +T D+ L AR S +P+G++L FL + D Sbjct: 2 PLVQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91 +L + + + ++ +L + LR+ V Sbjct: 62 RLL-VSKDIQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ +I R + D L G ++ + + L + Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D++ ++ KGCY GQEVV+R Q+R I++R + Sbjct: 178 GEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAA 236 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + D G++V A +D + Sbjct: 237 DTDAVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274 >gi|33151540|ref|NP_872893.1| hypothetical protein HD0303 [Haemophilus ducreyi 35000HP] gi|33147760|gb|AAP95282.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 295 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 11/225 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS+ I + G A +LQ +T DVL L + P+GKI F I + E Sbjct: 16 CVELSDYRLIGIAGVDAASYLQGQLTCDVLKLAIGEHTLTCHCDPKGKISALFRIYRAAE 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERF 120 F + I + +L Y + S V P+ GV NS+ + Sbjct: 76 QQFFMIIHNDLLAEALVQLKKYAVFSKVTFTPLTTPLYGVTGHEQLAKISENSTALLLNQ 135 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGIS 179 + ++ WG + D + + I GI P + + N IS Sbjct: 136 AQKRAII---WGEDLVTNGDCSLWDLMDIQDGIP-ILLKANQFEFIPQAVNLHAIENAIS 191 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 TKGCY+GQE V+R ++R + ++ + G D LP I Sbjct: 192 FTKGCYMGQETVARAKYRGVNKRAMFTLVGVFDGQVALPQIAESI 236 >gi|217972050|ref|YP_002356801.1| folate-binding protein YgfZ [Shewanella baltica OS223] gi|217497185|gb|ACK45378.1| folate-binding protein YgfZ [Shewanella baltica OS223] Length = 320 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 26/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117 F+L + + + + +L Y + S + +L E F + F D Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFVSEHFGDIHQ 139 Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 +RF + ++ D + L I G + Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L P SG Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISPESGL 258 Query: 219 PILTDD 224 I +D Sbjct: 259 EIAMED 264 >gi|167562451|ref|ZP_02355367.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia oklahomensis EO147] gi|167569634|ref|ZP_02362508.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia oklahomensis C6786] Length = 348 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 34/274 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL + +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 +L + + + + +L + LR+ + V + + + + S D Sbjct: 101 LL-VSKDVQPAAQKRLSMFVLRAKAKLADASDALVAIGFAGDVRAALSGVFDALPDGVHT 159 Query: 119 ----------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGIVD 155 R A W + L + G Sbjct: 160 KVDAPAGALIRLPDAAGRARYLWIGTRAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213 + P D++ G++ KGCY GQEVV+R Q+R I++R + D Sbjct: 220 ITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGADA 278 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 +G + D G++V A +D + Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312 >gi|209517029|ref|ZP_03265877.1| folate-binding protein YgfZ [Burkholderia sp. H160] gi|209502560|gb|EEA02568.1| folate-binding protein YgfZ [Burkholderia sp. H160] Length = 350 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 34/265 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + LS I G A FL + +T D+ L AR + + +G++L FL + Sbjct: 39 AYMPLSQFGVIDTTGDDAASFLHSQLTNDIQHLDAANARLAGYCSAKGRLLASFLSWR-S 97 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + + ++ +L + LR+ + V+ + + S D Sbjct: 98 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDTSGELAVIGLAGDVRGALSGVFDALPD 157 Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151 R A L W + + + L I Sbjct: 158 GVHVQVDGAAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRA 217 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 218 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 276 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234 D G+ + D G++V Sbjct: 277 ELDTVRPGTEVFHSDDPGQPCGMIV 301 >gi|237746054|ref|ZP_04576534.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes HOxBLS] gi|229377405|gb|EEO27496.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes HOxBLS] Length = 337 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 118/321 (36%), Gaps = 60/321 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + + G A+ F+ ++ D+L L AR +A TPQG++L F + K E Sbjct: 20 AVLLKQTGLLALEGDDAVSFIHGQLSNDILYLDAASARLAAYCTPQGRMLALFHVWKAEG 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111 L + R +L +L Y LR+ V + + +L + Sbjct: 80 -RIWLMLPRDILPALQKRLQMYVLRAKVKLADESGKQAILGVGGRRAGAVLSRWFSTLPS 138 Query: 112 ----------------NSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +F R+ +A + + E D ++ I Sbjct: 139 EPFGKVENGMGVLVRVGDAFGAPRYLLTVPLARLQEVESALSAELAMCDENSWALGDIEA 198 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + P ++ G+S KGCY GQEV++R Q+R +R+R Sbjct: 199 GVPQITLP-VQDRFIPQMVNLEQTGGLSFKKGCYPGQEVIARSQYRGTVRRRMF--HAYM 255 Query: 212 DLP-----------PSGSPILTDDIEI-GTLGVVVGK-----KALAIARIDK-----VDH 249 +LP SG+ + E+ GTL + + LA+ R++ V Sbjct: 256 ELPEGKSPAIDLNMASGADLFDAAGEVCGTLVMAARRDENRVDCLAVVRLEARETGTVHA 315 Query: 250 AIKKGMALT---VHGVRVKAS 267 G AL+ + G V+ + Sbjct: 316 TKADGPALSWMPLSGSPVETT 336 >gi|186475806|ref|YP_001857276.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia phymatum STM815] gi|184192265|gb|ACC70230.1| putative glycine cleavage T protein (aminomethyltransferase) [Burkholderia phymatum STM815] Length = 349 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 107/302 (35%), Gaps = 39/302 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L I G A FL + +T D L AR + +P+G++L FL+ ++ Sbjct: 41 PLPQFGVIDATGDDAASFLHSQLTNDTQHLDAATARLAGYCSPKGRLLASFLVW-CSGES 99 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------ 118 + + + + ++ +L + LR+ + + + + + + S D Sbjct: 100 IRMLVSKDVQPAVQKRLSMFVLRAKAKLSDASGDTLAIGLAGDVRKALSGIFDAIPDGVH 159 Query: 119 -----------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINHGIV 154 R A L W G ++ + + + L I G Sbjct: 160 VKVDGPAGSLVRVPDAAGRLRYVWVGPKAEVEACLPALETKLRRVSPGVWDWLDIRAGEP 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212 T + P D+L G++ KGCY GQEVV+R Q+R I++R + G + Sbjct: 220 R-ITQRVVEQFVPQMINFDVLGGVNFRKGCYPGQEVVARSQYRGTIKRRMSLANVAGETE 278 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKAS 267 G+ + D G++V A +D + A++ G L Sbjct: 279 SVVPGAELFHSDDPGQPCGMLVNTAAAPDGGVDALVEIKLAALENGTVHLGAADGPALTF 338 Query: 268 FP 269 P Sbjct: 339 LP 340 >gi|113969061|ref|YP_732854.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-4] gi|113883745|gb|ABI37797.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. MR-4] Length = 318 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 21/230 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+ Sbjct: 21 LANLSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ- 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111 D ++ + + + + +L Y + S + +L E Sbjct: 80 DVLLMLMPKDTLELDLPQLQKYAVFSKATLSNASDEWTLLGVAGEQAVPFVTQHFGEITE 139 Query: 112 ------NSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + +RF + T E D + L I G + + Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILQGTTAL 248 >gi|171058559|ref|YP_001790908.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6] gi|170776004|gb|ACB34143.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6] Length = 319 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 90/271 (33%), Gaps = 30/271 (11%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L ++ G A+ FL + ++ DV L AR +A QG++L L +K Sbjct: 11 ACRLPFWGVMRASGADAVSFLHSQLSNDVTRLDTGHARLAAYCNAQGRMLASLLYAKRSA 70 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSS 114 + L + +L + LR+ + VL W + + Sbjct: 71 EEVWLLCSADLLPVTLKRLSMFVLRAKARLSDASGELAVLGLAGQAGADWLGADAPAGAW 130 Query: 115 FIDERFSIADVLLHRTWGHN----------------EKIASDIKTYHELRINHGIVDPNT 158 ER V L G + L ++ GI P Sbjct: 131 DKSERDGAMHVRLPDVAGVPRWLWIGPAAAAEAVLQALPVVAESDWQWLDVSAGIA-PVV 189 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 P +L+ G+ KGCY GQEVV+R Q+ +++R ++ P+ Sbjct: 190 AATSGQFVPQMLNYELVGGVDFKKGCYPGQEVVARSQYLGKLKRRAFLLASDVPAQPAQE 249 Query: 219 PILTDD--IEIGTL---GVVVGKKALAIARI 244 + D G + LA+A + Sbjct: 250 VFWSGDTGQPAGQVAWSATAPDGSHLALAEL 280 >gi|296284234|ref|ZP_06862232.1| aminomethyltransferase [Citromicrobium bathyomarinum JL354] Length = 247 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 23/259 (8%) Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56 M++ L N++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + + Sbjct: 1 MTATRLQNRAVIRLSPTAAGEDVAGFLQGLLTNDVTG---ELPAYAALLSAQGKTMFDMI 57 Query: 57 ISK----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + T +L+ + D L+ +L Y+LR IEI + + W+ E + Sbjct: 58 VWPGRAGEHGATILLDCEADMADDLVKRLSLYRLRRK--IEIARDESLAVHWSVEAI--D 113 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 + D R L HR + + R++ G+ + + I + Sbjct: 114 AHPPDPRLP---ALGHRWLAPADDSEPADAAWLAHRLSLGVPEGRAEL--GDILWLETNA 168 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLG 231 L+G+S +KGCYIGQE +R+ R + +R +++ D + + L Sbjct: 169 VELHGVSFSKGCYIGQENTARMNWRQKVNRRLVVVPLDRSEEKRRKAEYPDLGLAVDHLR 228 Query: 232 V--VVGKKALAIARIDKVD 248 V + AL R++ + Sbjct: 229 VADITADLALGWMRLEAAE 247 >gi|257094049|ref|YP_003167690.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046573|gb|ACV35761.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 338 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 45/296 (15%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L++ I V G A FL +T+D+ L A+ SA + +G++L FL+ + D Sbjct: 42 PLTHLRLIAVGGPEAAVFLHNQVTSDIKHLATDAAQHSAWCSAKGRMLASFLVFRSGAD- 100 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + L++ ++ +L + LRS V I N + H + + D Sbjct: 101 YQLQLSADLLTMIVKRLQMFVLRSKVTIVDLSGNREIFGLAGPHAV--EALQALGLPVPD 158 Query: 125 VLLHRTWGHNEKI-----------------------------ASDIKTYHELRINHGIVD 155 L+ G + + L I GI Sbjct: 159 GPLNTAVGSAGLVIRLDSARFQIVTSTEDAAALWRRLAAHARPVGTAVWQWLDIQAGIP- 217 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T+ P A + L G+S KGCY GQE+++R Q+ +++ L Sbjct: 218 LITERTREEFVPQMANFERLGGVSFHKGCYPGQEIIARTQYLGKVKRHLYRAHSASPL-A 276 Query: 216 SGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +G I + G+V G ALA+ + + V +AL G Sbjct: 277 AGDTIYSATSPDHPCGMVTNAAPAPAGGYDALAVVQENFVAGG---DLALAAPGGP 329 >gi|332525885|ref|ZP_08402026.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2] gi|332109436|gb|EGJ10359.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2] Length = 318 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 109/300 (36%), Gaps = 38/300 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L++ I+ G A FLQ +T +VL L R + + +G++L F++ + Sbjct: 14 AVRLTDWGVIRASGNDAAAFLQGQLTQEVLRLDAGTVRLAGYCSAKGRLLASFVVWRRGP 73 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------SW 104 F+L +++ +L + LR+ +E + +W Sbjct: 74 AEFLLACSADLLPAVLKRLKMFVLRAQCQLEDASAEWPLWGLAGDAAAAALGAGAPAAAW 133 Query: 105 NQEHTFSNSSFID-------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 + S + R+ A +A + + L + + Sbjct: 134 RRVAPDEASELLRLDDVQGVPRWLFAGAEPP-VLPALPALAPEAWAW--LEVQSAVPRIV 190 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 P ++L+ G++ KGCY GQE+V+R Q+R +++R + P G Sbjct: 191 A-ATVEQFVPQMVNLELVGGVNFQKGCYPGQEIVARSQYRGTLKRRAFLFDADAPAAP-G 248 Query: 218 SPILTDDIEIGTLGVVV-------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + D G+VV G A A+ + A+ G+AL + A P Sbjct: 249 QDVYAADDPAQPAGMVVAAAPAPDGSGAWAVL-AETKIAALADGVALHLGAADGPALRPA 307 >gi|74318116|ref|YP_315856.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus denitrificans ATCC 25259] gi|74057611|gb|AAZ98051.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus denitrificans ATCC 25259] Length = 354 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 36/296 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS I + G FLQ +T DV LP A+ + +P+G++L FL + +D Sbjct: 53 ADLSQLGVIALRGADTAGFLQGQLTNDVRNLPADGAQWNGYCSPKGRLLANFLAWRNGDD 112 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------- 108 + L++ ++ +L + LR++V V L + Sbjct: 113 -YCLQLSGDILAGVLKRLSMFILRADVKARDASEETVRLVVAGKDAAAAVRAAMGELPEA 171 Query: 109 ---TFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDP 156 T + ++ R SIA W + + A+ + + +R+N GI Sbjct: 172 EMRTIALAAGQVVRVGDDKFVLSIAPERAAEVWQNLTRSATPVGAPVWDWMRLNAGIPMI 231 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P ++L+ G+S KGCY GQE+V+R Q+ +++R ++ + P Sbjct: 232 VA-ATQEQFVPQMVNLELIGGVSFQKGCYPGQEIVARSQYLGKLKRRMVLAHADAEAAP- 289 Query: 217 GSPILTDDIEIGTLGVVVGKK-----ALAIARIDKVDHAIKKGMALT-VHGVRVKA 266 G + + D++ G VV + + +V+ A + + L GV + Sbjct: 290 GDSLYSADLDGQASGTVVNAAPAPAGGFDLLAVVQVESANSQTLHLKSADGVALDL 345 >gi|281209059|gb|EFA83234.1| putative mitochondrial transferase [Polysphondylium pallidum PN500] Length = 396 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 119/368 (32%), Gaps = 99/368 (26%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKILLYFLIS 58 + L+++S +KV G A+ +Q + T ++ L P + + L+ G++L ++ Sbjct: 15 IPLTSRSILKVSGPDAVKLVQGLTTNNMGRLVDSQAPSPTSLYTGFLSSTGRLLFDAVVF 74 Query: 59 KI--------------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 E +++D I+ L +YK+R+ IE Sbjct: 75 HQQNVEVISSSASRVAKSDGSSGEQQLFIDVDSEVASRAIEHLHYYKIRNKATIENVTEE 134 Query: 99 GVVLSW--------NQEHTFSN------SSFIDERFSIADVLLHRTWGHNEK-------- 136 + S + F + + +D R + + N Sbjct: 135 FALFSVLDKTYKSVRNDQLFEHLKQQKCTVMMDPRHDAMGLRILVPSSKNSMKNEVLSNY 194 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y+ R+ +GI D+ + P + DLLNG+ KGCY+GQE+ SR + Sbjct: 195 PEEKEDVYNLYRVQNGIPQGVKDYSYDKVIPLEYNFDLLNGVDFHKGCYLGQELTSRTHY 254 Query: 197 RNIIRKRPMIITGTDD--------------------------LPPSGSPI---------- 220 +IRKR + + D PP+ + + Sbjct: 255 TGLIRKRLFPVVMSSDSPKEHSVKKEHHLLFSQSVVDSLDVQAPPADTELKITILTGSTS 314 Query: 221 ---------------LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRV 264 + LAI ++D +D A K + G + Sbjct: 315 PFNEKQPHQHSNTPPPPPSRTTEKVISSYNNIGLAIVKVDHIDSASFKSTNIKDPKGRSL 374 Query: 265 KASFPHWY 272 + P W+ Sbjct: 375 ELLEPCWW 382 >gi|323526019|ref|YP_004228172.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001] gi|323383021|gb|ADX55112.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001] Length = 375 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 95/267 (35%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L+ I G A FL +T D L AR + + +G++L FL + Sbjct: 64 AYAVLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 122 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 D L + + + ++ +L + LR+ + V+ + + S D Sbjct: 123 GDAIRLLVSKDVQAAVQKRLSMFILRAKAKLADASGELAVIGLAGDVRKALSGVFDALPD 182 Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151 R A L W G +I + + + L I Sbjct: 183 GVHVKVDGAAGSLIRVPDACERLRYLWIGPKAQIEAQLPALGEKLKQVSPAVWDWLDIRA 242 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 243 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTSLANVAG 301 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D +G+ + D G+VV Sbjct: 302 ELDSVKAGAELFHSDDPGQPCGMVVNA 328 >gi|171319766|ref|ZP_02908853.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MEX-5] gi|171095002|gb|EDT40027.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia ambifaria MEX-5] Length = 310 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 100/278 (35%), Gaps = 40/278 (14%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+ I V G A FL + +T D+ L AR S + +G++L FL + Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGV 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91 +L + + + ++ +L + LRS V Sbjct: 62 RLL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVRNALSGIFDALPDGVH 120 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 +++ G ++ +I R + D L G ++ + + L + Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGTLPVVSPAVWDW--LDVRA 177 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G + P D++ ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVPG 236 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 D +G + + G+VV A +D + Sbjct: 237 ETDTVHAGVELFHSEDAGQPCGMVVNAAAAPAGGVDAL 274 >gi|329119401|ref|ZP_08248087.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC BAA-1200] gi|327464546|gb|EGF10845.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC BAA-1200] Length = 287 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 101/274 (36%), Gaps = 22/274 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L + I+ G FL ++ + L A + TP+G+++ +++ Sbjct: 1 MHTSLLPFFAVIRATGDDRASFLHGQLSNHIEALAEGEACYATYNTPKGRVIANMIVANT 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +L + ++++ +L + LR+ V EI +G ++ F Sbjct: 61 GGE-LLLVLASDLAEAVVKRLRMFVLRAKVSFEILENHGAAGRLPDGTVPQPAAEPQLSF 119 Query: 121 S--IADVLLHRTWGH------------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 ++D L+ H A+ + I G + Sbjct: 120 PFHLSDGLIEIPLPHGGMFLTGETAVLPAHDAAAENAWKLHEIRSGYP-WICAATKESCV 178 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 + G+ KGCY GQE+++R Q+R +++ ++ G +G+ +L D E Sbjct: 179 AQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLFG--GSVEAGAAVLQDLTE 236 Query: 227 IGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256 GT+ G+ +LA+ + + + Sbjct: 237 AGTVINCADTPEGRLSLAVIKHSAAEGTLTDASG 270 >gi|332971574|gb|EGK10524.1| hypothetical protein HMPREF0476_0678 [Kingella kingae ATCC 23330] Length = 282 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 92/266 (34%), Gaps = 17/266 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + IKV G FL + D+ L A + TP+G+++ + +D Sbjct: 3 TQLPFFAIIKVSGDDRHDFLHNQFSNDINHLEKNYACYATYNTPKGRVIANLIAFNTGDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------FSNS 113 +L + + ++ +L + LR+ V +E+ P GV + F+ + Sbjct: 63 -ILLILAADVAEKVVKRLKMFVLRAKVQLELLPDWGVAATLPDNAPTVLPKEPRLQFAAN 121 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIK---TYHELRINHGIVDPNTDFLPSTIFPHDA 170 + + A L R A D+ ++ I G + T Sbjct: 122 EAGEIQLPHAGSL--RIAPKASLPAHDVAIEQVWNAHEIACGYP-WISAVTSETCVAQML 178 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 + G+ KGCY GQE+++R Q+R +++ + E G + Sbjct: 179 NQHKIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAVARNAVSQNAGAEVQDAAGAEAGIV 238 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMA 256 G L + + V ++ Sbjct: 239 INSAGSLHLLVVKHGSVAGELRDAAG 264 >gi|15603739|ref|NP_246813.1| hypothetical protein PM1874 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722304|gb|AAK03958.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 294 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 13/226 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + +++ G+ A +LQ +T DV L + +A +GKI F + + Sbjct: 15 CDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQ 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 TF L + + + +D+L Y + S V P + ++ E + ID + + Sbjct: 75 TFYLLVKKGLLPTALDQLKKYAVFSKVTF--TPCDWQIIGLAGEKIINACDEIDAQIRVT 132 Query: 124 -------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175 +L+H T + AS + + L I GI + + + P + L Sbjct: 133 LSSQQPRVILIHPTALDLQANASHV-VWDLLDIQDGIPLLSPE-TQAEFIPQALNLQCLE 190 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPI 220 + IS KGCYIGQE+V+R ++R ++ + + ++P S + Sbjct: 191 HAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEV 236 >gi|170692440|ref|ZP_02883603.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M] gi|170142870|gb|EDT11035.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M] Length = 358 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 93/267 (34%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L+ I G A FL +T D L AR + + +G++L FL + Sbjct: 47 AYAVLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 105 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + + ++ +L + LR+ + V+ + + S D Sbjct: 106 GDTLRLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVIGLAGDVRKALSGVFDALPD 165 Query: 119 --------------RFSIADVLLHRTW--------GHNEKIASDIKT-----YHELRINH 151 R A L W H + + + L I Sbjct: 166 GVHVKVDGAAGSLIRVPDAFERLRYLWIGPKAQVEAHLPSLGEKLTQVSPAVWDWLDIRA 225 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 226 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 284 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D +G + D G+VV Sbjct: 285 ELDTVKAGVELFHSDDPGQPCGMVVNA 311 >gi|237748463|ref|ZP_04578943.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes OXCC13] gi|229379825|gb|EEO29916.1| glycine cleavage T-protein superfamily protein [Oxalobacter formigenes OXCC13] Length = 333 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 98/272 (36%), Gaps = 43/272 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L + + G+ A+ F+ ++ D+ L AR +A PQG++L F K Sbjct: 21 VLLKQTGLLALEGEDAVSFIHGQLSNDIEHLGSSQARLAAYCNPQGRMLALFHAWKSSG- 79 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111 L + +L +L Y LR+ V + + N +L E Sbjct: 80 KVWLTVPLDILPALQKRLQMYVLRAKVTLSDESGNMAILGIGGEKGGEALSKWFETLPSE 139 Query: 112 ---------------NSSFIDER--FSIADVLLHRTWGHNEKIAS--DIKTYHELRINHG 152 +F R +IA+ L S D + I G Sbjct: 140 PFGKTENEFGVLVRVADAFGFPRYLLTIAEKRLQVVESELSSTLSVCDESGWTMGDIKAG 199 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----IT 208 + + P ++ G+S KGCY GQEV++R Q++ +++R + Sbjct: 200 VPQITLP-VQDRFIPQMVNLEQAGGLSFKKGCYPGQEVIARSQYKGTVKRRMFHGMVELP 258 Query: 209 GTDDLP-----PSGSPILTDDIEI-GTLGVVV 234 D+ P +G+ I+ D ++ GT+ Sbjct: 259 FEDNPPIDVNMTAGANIVDSDGQVCGTIVSSA 290 >gi|260913200|ref|ZP_05919682.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325] gi|260632787|gb|EEX50956.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325] Length = 292 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 11/225 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + I++ G+ A +LQ +T DV L +A P+GK++ F + + E Sbjct: 16 CQLQQYTLIEIKGEDAEKYLQGQLTCDVTKLEIGQTTLTAHCDPKGKMVSLFRLIRTEAQ 75 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122 F + I +S + +D L Y + S V +N ++ E T S I+ + I Sbjct: 76 CFYVLIKKSLLPTALDLLKKYAVFSKVTF--TELNWQIIGLAGETTCKAFSDINAQIRID 133 Query: 123 -----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLN 176 LL + + + L I G+ + P + + Sbjct: 134 IQTQQPRTLLIHPTSLDITPNMPYQIWDLLDIQDGMPLLSAQ-TQGEFIPQALNVQSIEQ 192 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220 GIS KGCYIGQE+V+R ++R ++ + G + P GS + Sbjct: 193 GISFQKGCYIGQEIVARAKYRGANKRAMFTLVGNSIETPEIGSEV 237 >gi|295676545|ref|YP_003605069.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002] gi|295436388|gb|ADG15558.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002] Length = 355 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 94/267 (35%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + LS I G A FL A +T DV L AR + + +G++L FL + Sbjct: 44 AYMPLSQFGVIDTTGDDAASFLHAQLTNDVQHLDAANARLAGYCSAKGRLLASFLSWR-S 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + + ++ +L + LR+ + V+ + + S D Sbjct: 103 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVVGLAGDVRGALSGVFDALPD 162 Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151 R A L W + + + L I Sbjct: 163 GVHVQVDGTAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRA 222 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 223 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 281 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D G + D G++V Sbjct: 282 ELDTVRPGVELFHSDDPGQPCGMIVNA 308 >gi|307729686|ref|YP_003906910.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003] gi|307584221|gb|ADN57619.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003] Length = 374 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 93/263 (35%), Gaps = 34/263 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I G A FL +T D L AR + + +G++L FL + DT Sbjct: 67 LTQFGVIDATGDDAAAFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-SGDTL 125 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 L + + + ++ +L + LR+ + V+ + + S D Sbjct: 126 RLLVSKDLQAAVQKRLSMFILRAKAKLADASGELAVIGLAGDVRKALSGVFDALPDGVHV 185 Query: 119 ----------RFSIADVLLHRTW--------GHNEKIASDIKT-----YHELRINHGIVD 155 R A L W H + ++ + L I G Sbjct: 186 KVDGAAGSLIRVPDAFERLRYLWIGPKAQIEAHLPALGEKLQQVSPAVWDWLDIRAGEPR 245 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213 T + P D+L ++ KGCY GQEVV+R Q+R I++R + G D Sbjct: 246 -ITQPVVEQFVPQMVNFDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTSLANVAGELDT 304 Query: 214 PPSGSPILTDDIEIGTLGVVVGK 236 +G + D G+VV Sbjct: 305 VKAGVELFHSDDPGQPCGMVVNA 327 >gi|149186024|ref|ZP_01864339.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21] gi|148830585|gb|EDL49021.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21] Length = 244 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 15/211 (7%) Query: 1 MSSVYLSNQSFIKVCGKS----AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56 M++ L++++ +++ FLQ ++T+DV + + +LTPQGK L + Sbjct: 1 MTATRLTSRAIVRLTPADDSESIADFLQGLLTSDVKQA---LPVYAGLLTPQGKALFDMI 57 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + +D +L+ + + L +L Y+LR + I + GV E + Sbjct: 58 VWPAGDDGLLLDCEAEIAEELAKRLSLYRLRRKIDIAVDDTVGVHW----EGHTGDGGAP 113 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D R + E S + Y R++ G+ + + I + L+ Sbjct: 114 DPRLAALGQRW--LAPVAEDEGSADEAYRAHRLSLGVPEGRAEL--GDILWLETNAVELH 169 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 G++ KGCYIGQE +R+ R+ I +R +++ Sbjct: 170 GVAFDKGCYIGQENTARMNWRSKINRRLVVV 200 >gi|134094618|ref|YP_001099693.1| hypothetical protein HEAR1394 [Herminiimonas arsenicoxydans] gi|133738521|emb|CAL61566.1| putative Glycine cleavage T protein (aminomethyl transferase) [Herminiimonas arsenicoxydans] Length = 352 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 110/296 (37%), Gaps = 41/296 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +YL I G A FL + +T DV L AR + +P+G++L LI K Sbjct: 46 PIIYL---GLIAASGDEAAHFLHSQLTNDVEHLDAGAARLAGYCSPKGRLLASLLIWKTA 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------N 112 D +L++ R + S+ +L + LR+ + N V+L Sbjct: 103 -DGIMLQLPRELQASVQKRLQMFVLRAKARLIDATENHVMLGLAGPAASKVLQQWFPVLP 161 Query: 113 SSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHEL---------------RIN 150 ++ D+ S A L+ + A ++ + +L I+ Sbjct: 162 AAIYDKAESAAGTLIRHPDAFGTARYQWITTAAQAVEAWPQLTKVLQAAGAAAWQLAEID 221 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + P +L+ G++ KGCY GQE+V+R Q+ +++R + + Sbjct: 222 SGVPHISI-ATQEKFVPQMINFELIGGVNFRKGCYPGQEIVARSQYLGKLKRRMLHAKVS 280 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ I + G+VV + R + + A + L V+ Sbjct: 281 AASAEPGTEIFSVSDPEQPCGMVVNAE-----RTNAQEIACLVEIKLAAAESEVRL 331 >gi|157960459|ref|YP_001500493.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella pealeana ATCC 700345] gi|157845459|gb|ABV85958.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella pealeana ATCC 700345] Length = 323 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 94/259 (36%), Gaps = 23/259 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ F+ +T D+ +L R A P+GK+L F +DT Sbjct: 24 LSHLGLISVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAK-DDTL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + + + + +L Y + S + ++L E + + S Sbjct: 83 FIMMPKDTLALDLPQLQKYAVFSKAELADISDAWLLLGVAGEQANAWLTAQFGELSAELT 142 Query: 123 ---ADVLLHRT---------------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 ++LH E+ D + L I G + Sbjct: 143 LIDGGIILHDAGRYIVAIDKTHADAFIAKIEQPIFDASAWQTLEILAGYPNLGASH-QGQ 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY+GQE V+R+++R ++ I++G P + L Sbjct: 202 FVPQMCNVQAVNGISFNKGCYMGQETVARMKYRGGNKRALYIVSGKVSAPLTADSQLEIA 261 Query: 225 IEIGTLGVVVGKKALAIAR 243 +E G G A+ R Sbjct: 262 LEDGEGFRRAGTIIEAVQR 280 >gi|238759289|ref|ZP_04620455.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236] gi|238702450|gb|EEP95001.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236] Length = 330 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS DS + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRSLLDSQLSELKKYAVFSKVVIAPQPDVVLLGIAGTAAKTALAEVFTELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T + S ERF A L+ G + ++ K + L I Sbjct: 139 STEHPVVQQGQSTLLHFSLPAERFLLVTDAEQAQQLVATLSGSAQF--NNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G +++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDSE-SSAQFIPQATNIQALNGISFSKGCYSGQEMVARAKYRGANKRALYWLAGH 255 Query: 211 DD-LPPSGSPI 220 + +P +G + Sbjct: 256 ANRVPAAGEDL 266 >gi|160873993|ref|YP_001553309.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS195] gi|160859515|gb|ABX48049.1| folate-binding protein YgfZ [Shewanella baltica OS195] gi|315266222|gb|ADT93075.1| folate-binding protein YgfZ [Shewanella baltica OS678] Length = 320 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117 F+L + + + + +L Y + S + +L E F + F D Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFLSEHFGDIHQ 139 Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 +RF + ++ D + L I G + Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258 Query: 219 PILTDD 224 I +D Sbjct: 259 EIAMED 264 >gi|322513844|ref|ZP_08066926.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976] gi|322120331|gb|EFX92270.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976] Length = 295 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 13/226 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS I++ G A +LQ +T DV L ++ P+GK+ + + Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTSHCDPKGKMSALIRLYRQAA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119 D F+ I +++L Y + S V PI GV N ++ + + Sbjct: 76 DKFVAMIHVDLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 + WG + +D + + + I G+ + P + + N I Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLINIQDGVP-ILLKANQFELIPQATNLQAVENAI 190 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPI 220 S TKGCYIGQE V+R ++R ++ + G LP G I Sbjct: 191 SFTKGCYIGQETVARAKYRGANKRAMFTLVGKFEGEVSLPEIGGSI 236 >gi|238795222|ref|ZP_04638807.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909] gi|238725442|gb|EEQ17011.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909] Length = 330 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 33/250 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS D+ + +L Y + S V I QP ++ Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVTIAAQPDAVLLGIAGAQAKAALAEVFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 ++ T + S ERF + L T + ++ K + L I Sbjct: 139 SAEHPVTQQGNSTLLHFSLPAERFLLVTDAEQAQQLVATLADRAQF-NNSKQWLALDIEA 197 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 198 GLPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGAA 256 Query: 212 D-LPPSGSPI 220 +P +G + Sbjct: 257 SRVPAAGEDL 266 >gi|304411119|ref|ZP_07392735.1| folate-binding protein YgfZ [Shewanella baltica OS183] gi|307301758|ref|ZP_07581516.1| folate-binding protein YgfZ [Shewanella baltica BA175] gi|304350654|gb|EFM15056.1| folate-binding protein YgfZ [Shewanella baltica OS183] gi|306913796|gb|EFN44217.1| folate-binding protein YgfZ [Shewanella baltica BA175] Length = 320 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117 F+L + + + + +L Y + S + +L E F + F D Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFVSEHFGDIHQ 139 Query: 118 --------------ERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFL 161 +RF + + S D + L I G + Sbjct: 140 EFTPIEHGAILKDADRFILMLAPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258 Query: 219 PILTDD 224 I +D Sbjct: 259 EIAMED 264 >gi|330817243|ref|YP_004360948.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3] gi|327369636|gb|AEA60992.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3] Length = 346 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 110/306 (35%), Gaps = 44/306 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS I V G A FL + +T D+ L + + T +G++L FL + E Sbjct: 37 YAPLSQFGIIDVAGDDAATFLHSQLTNDIEHLDAAGVKLAGYCTAKGRLLASFLAWRSES 96 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSN--SSFIDE- 118 +L + + + ++ +L + LR+ + + + V ++ S + D Sbjct: 97 GVRLL-VSKDIQPAVQKRLSMFVLRAKAKLSDAAGLVAVGIAGEAREALSGLFEALPDGV 155 Query: 119 ------------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINH 151 R AD W G +++ + + E+R Sbjct: 156 HTKLDGPAGTLIRLPDADGRARYLWIASREQFEAGAAVLDGKLARVSPAVWDWLEIRAAE 215 Query: 152 G-IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208 I P + P D++ ++ KGCY GQE+V+R Q+R I++R + + Sbjct: 216 PRITQPVVE----QFVPQMLNYDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRAALVHVE 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVR 263 G D +G + + G++V A +D + A + G L Sbjct: 272 GETDTVRAGIELFHSEDPGQPCGMIVNAAAAPAGGVDALAEIKLAAQESGTVHLGAADGP 331 Query: 264 VKASFP 269 A P Sbjct: 332 ALAFLP 337 >gi|186896605|ref|YP_001873717.1| putative global regulator [Yersinia pseudotuberculosis PB1/+] gi|226730812|sp|B2K0P7|YGFZ_YERPB RecName: Full=tRNA-modifying protein ygfZ gi|186699631|gb|ACC90260.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+] Length = 330 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108 E +E RS D+ + +L Y + S V+IE QP GV S + Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T + S ERF A L+ + G + +D K + L I Sbjct: 139 STEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 256 ASRVPAAGEDL 266 >gi|238763222|ref|ZP_04624187.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638] gi|238698495|gb|EEP91247.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638] Length = 330 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 34/249 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E R+ D+ + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRNVLDNQLRELKKYAVFSKVVIAAQPDAALLGVAGAQAKTALAGIFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T + S ERF A L+ + ++ +D K + L I Sbjct: 139 DAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVEKL--SDQAQLNDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G+ Sbjct: 197 AGFPIIDTD-NSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGS 255 Query: 211 DDLPPSGSP 219 P+ Sbjct: 256 ASRVPTAGE 264 >gi|309972377|gb|ADO95578.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 280 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I L D K + I G+ + + + P + + IS Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGTNKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|269101838|ref|ZP_06154535.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161736|gb|EEZ40232.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 323 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 35/273 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G+ A +LQ +T DV++LP + + A +GK+ F + Sbjct: 21 LAVIDLHDWAAVTLVGQDAKSYLQGQVTCDVVSLPEQESTLGAHCDAKGKMRTIFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 ++ ++ +S DS + +L Y + S V I+ + ++ + F + F Sbjct: 81 QQGYAYIQ-RQSVMDSQLPELKKYAVFSKVEIKPSNEVILGIAGSDAQAFIDQHFNGTSN 139 Query: 116 -----------IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 IDE+ +A+ L+H D + I + + Sbjct: 140 VRHHDQGSAIKIDEQRWQLLISPELAEQLIHALPEK--ATCCDSTLWDLYDIRAALPRID 197 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPS 216 + P + ++GIS KGCY+GQE V+R ++R I ++ I+TG D P + Sbjct: 198 SAIELE-FIPQALNLQAVDGISFKKGCYVGQETVARAKYRGINKRAMFIVTGHADHAPQA 256 Query: 217 GSPIL----TDDIEIGTLGVV---VGKKALAIA 242 G I + GT+ ALA+ Sbjct: 257 GDSIERQVGENWRSGGTVITGYHFSDNHALALV 289 >gi|240948853|ref|ZP_04753209.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305] gi|240296668|gb|EER47279.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305] Length = 295 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 19/229 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS I++ G A +LQ +T DV L ++ P+GK+ + + E Sbjct: 16 CILLSQYRLIEIAGIDAEKYLQGQLTCDVSKLAIGEHTLTSHCDPKGKMSALLRLYRAEA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVV----LSWNQEHTFSNSSFI 116 + F I + + +L Y + S V + + GV L+ QE++ + + Sbjct: 76 ERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGVTDFERLAKQQENSTALALTQ 135 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175 ++ +I WG +D + + I G+ + P A + + Sbjct: 136 GQKRAI-------VWGEEFAPNADTTLWDLMDIQDGLP-ILLKANQFELIPQAANLQAVE 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220 N IS TKGCYIGQE V+R ++R ++ + G DLP + I Sbjct: 188 NAISFTKGCYIGQETVARAKYRGANKRAMFTLVGKVAEEVDLPQPATSI 236 >gi|22127159|ref|NP_670582.1| putative global regulator [Yersinia pestis KIM 10] gi|45443330|ref|NP_994869.1| putative global regulator [Yersinia pestis biovar Microtus str. 91001] gi|108806367|ref|YP_650283.1| putative global regulator [Yersinia pestis Antiqua] gi|108813258|ref|YP_649025.1| putative global regulator [Yersinia pestis Nepal516] gi|145597923|ref|YP_001161999.1| putative global regulator [Yersinia pestis Pestoides F] gi|150260090|ref|ZP_01916818.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125] gi|162420968|ref|YP_001608147.1| putative global regulator [Yersinia pestis Angola] gi|165924945|ref|ZP_02220777.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937370|ref|ZP_02225934.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|166010263|ref|ZP_02231161.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212747|ref|ZP_02238782.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399919|ref|ZP_02305437.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418709|ref|ZP_02310462.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425340|ref|ZP_02317093.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467686|ref|ZP_02332390.1| putative aminomethyltransferase [Yersinia pestis FV-1] gi|170023124|ref|YP_001719629.1| putative global regulator [Yersinia pseudotuberculosis YPIII] gi|218928072|ref|YP_002345947.1| putative global regulator [Yersinia pestis CO92] gi|229837585|ref|ZP_04457747.1| predicted folate-dependent regulatory protein [Yersinia pestis Pestoides A] gi|229840808|ref|ZP_04460967.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842633|ref|ZP_04462788.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. India 195] gi|229903714|ref|ZP_04518827.1| predicted folate-dependent regulatory protein [Yersinia pestis Nepal516] gi|270487493|ref|ZP_06204567.1| folate-binding protein YgfZ [Yersinia pestis KIM D27] gi|294502935|ref|YP_003566997.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003] gi|118578000|sp|Q1CB34|YGFZ_YERPA RecName: Full=tRNA-modifying protein ygfZ gi|118578001|sp|Q7CGT3|YGFZ_YERPE RecName: Full=tRNA-modifying protein ygfZ gi|118578002|sp|Q1CF05|YGFZ_YERPN RecName: Full=tRNA-modifying protein ygfZ gi|166979591|sp|A4TIB4|YGFZ_YERPP RecName: Full=tRNA-modifying protein ygfZ gi|226730813|sp|A9R4L4|YGFZ_YERPG RecName: Full=tRNA-modifying protein ygfZ gi|226730814|sp|B1JNT4|YGFZ_YERPY RecName: Full=tRNA-modifying protein ygfZ gi|21960221|gb|AAM86833.1|AE013929_6 hypothetical protein y3283 [Yersinia pestis KIM 10] gi|45438199|gb|AAS63746.1| Predicted aminomethyltransferase related to GcvT [Yersinia pestis biovar Microtus str. 91001] gi|108776906|gb|ABG19425.1| hypothetical protein YPN_3098 [Yersinia pestis Nepal516] gi|108778280|gb|ABG12338.1| hypothetical protein YPA_0370 [Yersinia pestis Antiqua] gi|115346683|emb|CAL19566.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145209619|gb|ABP39026.1| hypothetical protein YPDSF_0617 [Yersinia pestis Pestoides F] gi|149289498|gb|EDM39575.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125] gi|162353783|gb|ABX87731.1| putative aminomethyltransferase [Yersinia pestis Angola] gi|165914844|gb|EDR33457.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|165923145|gb|EDR40296.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990749|gb|EDR43050.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206039|gb|EDR50519.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962703|gb|EDR58724.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050627|gb|EDR62035.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055740|gb|EDR65524.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749658|gb|ACA67176.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] gi|229679484|gb|EEO75587.1| predicted folate-dependent regulatory protein [Yersinia pestis Nepal516] gi|229690943|gb|EEO82997.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697174|gb|EEO87221.1| predicted folate-dependent regulatory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704273|gb|EEO91284.1| predicted folate-dependent regulatory protein [Yersinia pestis Pestoides A] gi|262360970|gb|ACY57691.1| hypothetical protein YPD4_0782 [Yersinia pestis D106004] gi|262364910|gb|ACY61467.1| hypothetical protein YPD8_0777 [Yersinia pestis D182038] gi|270335997|gb|EFA46774.1| folate-binding protein YgfZ [Yersinia pestis KIM D27] gi|294353394|gb|ADE63735.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003] gi|320014025|gb|ADV97596.1| putative folate-dependent regulatory protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 330 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108 E +E RS D+ + +L Y + S V+IE QP GV S + Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T + S ERF A L+ + G + +D K + L I Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 256 ASRVPAAGEDL 266 >gi|56459928|ref|YP_155209.1| aminomethyltransferase [Idiomarina loihiensis L2TR] gi|56178938|gb|AAV81660.1| Predicted aminomethyltransferase, GcvT family [Idiomarina loihiensis L2TR] Length = 297 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 9/247 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV L++ + V G+ A FLQ +T D+ L A GK F + + E+ Sbjct: 17 SVQLTDYGILSVSGEDADSFLQGQLTCDLRKLDQDNCLYGAHCDQTGKAFSIFWLYR-ED 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-S 121 D L + RS + + +L + + S V IE + + S ++ D R Sbjct: 76 DAVFLIMHRSAIEGSLAQLKKFGVFSKVTIEDVSDDWSIAGVFGSKAASVAAEFDGRVMQ 135 Query: 122 IADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + + I++D + L I ++ + P + + +GIS Sbjct: 136 VGTSPDQYLLLSQQPISTDYPQPYWDALEIERVRPQLTSENI-QAFVPQMMNLQVWDGIS 194 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCYIGQE ++R+++ ++ ++G +G+ + + IG G Sbjct: 195 FDKGCYIGQETIARMKYLGKQKRALFRLSGKVTAQVTAGTQL---EKAIGENWRRAGTVI 251 Query: 239 LAIARID 245 +A+ R D Sbjct: 252 MAVNRTD 258 >gi|126175700|ref|YP_001051849.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS155] gi|125998905|gb|ABN62980.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS155] Length = 320 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 26/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFID--- 117 F+L + + + + +L Y + S + + ++ Q F + F D Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLIGVAGEQASLFVSEHFGDIHQ 139 Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 +RF + ++ D + L I G + Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEIIAGYPNLAASHA 199 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258 Query: 219 PILTDD 224 I +D Sbjct: 259 EIAMED 264 >gi|148825254|ref|YP_001290007.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE] gi|148715414|gb|ABQ97624.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE] Length = 280 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I L D K + I G+ + + + P + + IS Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|307262639|ref|ZP_07544269.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306872062|gb|EFN03776.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 279 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 13/223 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I++ G A +LQ +T DV L + P+GK+ + + D F Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAADKF 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122 I I +++L Y + S V PI GV N ++ + + Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181 + WG + +D + + + I GI + P + + N IS + Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220 KGCYIGQE V+R ++R ++ + G D LP G + Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 220 >gi|148827663|ref|YP_001292416.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG] gi|148718905|gb|ABR00033.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG] Length = 280 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEKRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|187923927|ref|YP_001895569.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN] gi|187715121|gb|ACD16345.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN] Length = 357 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 93/267 (34%), Gaps = 34/267 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L+ I G A FL +T D L AR + + +G++L FL + Sbjct: 46 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 104 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 DT L + + ++ +L + LR+ + V+ + + S D Sbjct: 105 GDTIRLLASKDVQAAVQKRLSMFVLRAKAKLVDASGELAVIGLAGDVRKALSGVFDALPD 164 Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151 R A L W + + + L I Sbjct: 165 GVHVKVDGAAGSLIRVPDALGHLRFLWIGPKAQVESLLPLLEEKLKRVSPAVWDWLDIRA 224 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209 G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G Sbjct: 225 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 283 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236 D +G+ + D G+VV Sbjct: 284 ELDTVHAGAELFHSDDPGQPCGMVVNA 310 >gi|229846552|ref|ZP_04466660.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1] gi|229810645|gb|EEP46363.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1] Length = 280 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|152999373|ref|YP_001365054.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS185] gi|151363991|gb|ABS06991.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella baltica OS185] Length = 320 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117 F+L + + + + +L Y + S + +L E F + F D Sbjct: 81 ALFML-MPKDTIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASLFVSEHFGDIHQ 139 Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 +RF + ++ D + L I G + Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258 Query: 219 PILTDD 224 I +D Sbjct: 259 EIAMED 264 >gi|307247033|ref|ZP_07529087.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249255|ref|ZP_07531252.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251578|ref|ZP_07533485.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256077|ref|ZP_07537865.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260509|ref|ZP_07542203.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306856485|gb|EFM88634.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858779|gb|EFM90838.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861042|gb|EFM93048.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865499|gb|EFM97394.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869821|gb|EFN01604.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 279 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 22/275 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I++ G A +LQ +T DV L + P+GK+ + + D F Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAADKF 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122 I I +++L Y + S V PI GV N ++ + + Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181 + WG + +D + + + I GI + P + + N IS + Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKK 237 KGCYIGQE V+R ++R ++ + G D LP G + ++++G G Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRATGTI 234 Query: 238 ALAIARIDKV------DHAIKKGMALTVHGVRVKA 266 ++A +K+ ++ ++ A ++GV + Sbjct: 235 LNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 269 >gi|145640439|ref|ZP_01796023.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021] gi|145275025|gb|EDK14887.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.4-21] Length = 280 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|319427571|gb|ADV55645.1| folate-binding protein YgfZ [Shewanella putrefaciens 200] Length = 318 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 F+L + + + + +L Y + S + +L E Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139 Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 N + + + VL T E D + L I G + Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAEHTVFDATAWQALEIAAGYPNLAASHAHQ 199 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|238786189|ref|ZP_04630139.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970] gi|238712906|gb|EEQ04968.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970] Length = 330 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS D+ + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVITAQPEAVLLGIAGAQARAALAELFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T + S ERF A L+ + + ++ + + L I Sbjct: 139 DAEHPVLQQGSSTLLHFSLPAERFLLVTDTEQAQQLIDKLADSAQ--LNNSQQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDAD-TSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGQ 255 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 256 ASRVPAAGEDL 266 >gi|223041896|ref|ZP_03612082.1| hypothetical protein AM202_0492 [Actinobacillus minor 202] gi|223017312|gb|EEF15737.1| hypothetical protein AM202_0492 [Actinobacillus minor 202] Length = 295 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 19/229 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS I++ G A +LQ +T DV L ++ P+GK+ + + E Sbjct: 16 CILLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAVGEHTLTSHCDPKGKMSALLRLYRAEA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFI 116 + F I + + +L Y + S V + + +L+ QE++ + S Sbjct: 76 ERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGITDFELLAKCQENSTALSLTQ 135 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175 ++ +I WG ++ + + I G+ + + P A + + Sbjct: 136 GQKRAI-------VWGEELAPNAEAALWDLMDIQDGLPILLKE-NQFELIPQAANLQAVE 187 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPI 220 N IS TKGCYIGQE V+R ++R ++ + G DLP + I Sbjct: 188 NAISFTKGCYIGQETVARAKYRGANKRAMFTLVGEVAEKVDLPQPATSI 236 >gi|299529313|ref|ZP_07042752.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni S44] gi|298722691|gb|EFI63609.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni S44] Length = 318 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 20/253 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSAD 72 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110 +L DRS + +L + LR+ + + + + Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALK 132 Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165 + + + A G + + + G+ + + Sbjct: 133 QQGDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + + Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250 Query: 226 EIGTLGVVVGKKA 238 G VV A Sbjct: 251 LEQATGTVVQAAA 263 >gi|16272414|ref|NP_438627.1| hypothetical protein HI0466 [Haemophilus influenzae Rd KW20] gi|260580471|ref|ZP_05848299.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW] gi|1175250|sp|P44000|Y466_HAEIN RecName: Full=Uncharacterized protein HI_0466 gi|1573444|gb|AAC22125.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092813|gb|EEW76748.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW] Length = 280 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T + S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPNFSLEIDEKRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKVQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|302694057|ref|XP_003036707.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8] gi|300110404|gb|EFJ01805.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8] Length = 391 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 133/360 (36%), Gaps = 91/360 (25%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + ++N++ + V G A+ FL ++ ++V +A L PQG++L + Sbjct: 15 TVAPVANRALLAVTGSQAVEFLNGLVASEVH--APHKPFYTAFLHPQGRVLHDAFVYTTT 72 Query: 62 EDT-----FILEIDR---SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHT--- 109 + T +++E D +L D L Y LRS V + ++ V +W Sbjct: 73 DPTSGAKGYVIEYDTRPGELSTALPDLLKRYILRSKVKLRDVTNEYDVWQAWGSPQAERF 132 Query: 110 --------FSNSSFIDERFSIADVLLHRTW--------------------GHNEKIASD- 140 F+ S ++ + + + TW G + ASD Sbjct: 133 WDHERRWAFAKSGAVEPAWDVLNAWPWGTWDLALHDRRAPGMGTRMLVRKGDKPEAASDH 192 Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y RI HG+ + D P+ FP ++ +D++ G++ KGCY+GQE+ R H Sbjct: 193 DIASTDAYKLHRILHGVPEGTADIPPTQAFPMESNLDIMGGLNFRKGCYVGQELTVRTYH 252 Query: 197 RNIIRKRPMIITGTDD-------LPPSGSPILTDDIEI---------------------- 227 ++RKR + + P +P L ++I + Sbjct: 253 TGVVRKRILPVALHLPGERPTLVQPSPTAPHLPENIAVNARIAPQPDTPSPDQPHKRIPR 312 Query: 228 ----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV------HGVRVKAS-----FPHWY 272 G L + LA+ R+++V A + + G V +PHW+ Sbjct: 313 PRGTGKLLSNIHGVGLALLRLEQVKGAEAGDLRFELDVPTSGDGSEVTQIEASHWWPHWW 372 >gi|145636266|ref|ZP_01791935.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH] gi|145270431|gb|EDK10365.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH] Length = 280 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|145632732|ref|ZP_01788466.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655] gi|145634537|ref|ZP_01790246.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA] gi|229844374|ref|ZP_04464514.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1] gi|144986927|gb|EDJ93479.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655] gi|145268082|gb|EDK08077.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA] gi|229812623|gb|EEP48312.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1] Length = 280 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I L D K + I G+ + + + P + + IS Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|319898015|ref|YP_004136212.1| hypothetical protein HIBPF18630 [Haemophilus influenzae F3031] gi|317433521|emb|CBY81904.1| conserved hypothetical protein [Haemophilus influenzae F3031] Length = 280 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQKSEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|145628842|ref|ZP_01784642.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21] gi|145638619|ref|ZP_01794228.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII] gi|260582268|ref|ZP_05850061.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127] gi|144979312|gb|EDJ88998.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21] gi|145272214|gb|EDK12122.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII] gi|260094636|gb|EEW78531.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127] gi|309750118|gb|ADO80102.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 280 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|145630355|ref|ZP_01786136.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae R3021] gi|144984090|gb|EDJ91527.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae R3021] Length = 280 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAAN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|119897884|ref|YP_933097.1| aminomethyltransferase [Azoarcus sp. BH72] gi|119670297|emb|CAL94210.1| conserved hypothetical aminomethyltransferase [Azoarcus sp. BH72] Length = 342 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 108/301 (35%), Gaps = 43/301 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L + I+ G + FL + + DV LP A+ S+ +P+G++L L+ E + Sbjct: 39 VPLLHLGLIRSVGPDSTTFLHNLFSNDVAKLPADGAQWSSFNSPKGRMLASLLLWP-EAE 97 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120 L + +++ KL Y LRS V + V V + + Sbjct: 98 GHSLVMAADILPAMLKKLSMYVLRSKVKLNDAGETTVLIGVAGGDAAAVLQGAGLPVPAA 157 Query: 121 SI-----ADVLLHRTWGHNEKIASDI--------------------KTYHELRINHGIVD 155 + A + R +A D + I G+ Sbjct: 158 PMQQVSAAAGRVVRVGEQAFVLAIDSAAASSVFTALVAAGAHKAGTAAWQLAMIRAGVP- 216 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 T DL+ G++ KGCY GQE+V+R Q+ ++KR + D +P Sbjct: 217 LITAPTQEEFVAQMLNYDLIGGVNFKKGCYPGQEIVARTQYLGTVKKRLYRVALDADSVP 276 Query: 215 PSGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHA-IKKGMALTVHGVRVK 265 GS + + G + V G +ALA+ + V+ ++ G G V+ Sbjct: 277 TPGSDLYAPDFGEQSAGKVVNVAPSPEGGYEALAVLQNTSVEGGQLRYGSP---AGAPVR 333 Query: 266 A 266 Sbjct: 334 V 334 >gi|123443583|ref|YP_001007556.1| putative global regulator [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166979589|sp|A1JPM8|YGFZ_YERE8 RecName: Full=tRNA-modifying protein ygfZ gi|122090544|emb|CAL13413.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 330 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS D+ + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVIAAQPDAVLLGVAGTQAKAVLAEVFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T S ERF A L+ + + ++ K + L I Sbjct: 139 NADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKLADRAQF--NNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G+ Sbjct: 197 AGFPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGS 255 Query: 211 DD-LPPSGSPI 220 + P G + Sbjct: 256 ANRAPAVGEDL 266 >gi|319775606|ref|YP_004138094.1| hypothetical protein HICON_09480 [Haemophilus influenzae F3047] gi|329122346|ref|ZP_08250933.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116] gi|317450197|emb|CBY86413.1| conserved hypothetical protein [Haemophilus influenzae F3047] gi|327473628|gb|EGF19047.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116] Length = 280 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQESEIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|264677744|ref|YP_003277650.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni CNB-2] gi|262208256|gb|ACY32354.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas testosteroni CNB-2] Length = 318 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 91/253 (35%), Gaps = 20/253 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ ++ D Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRLSAD 72 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110 +L DRS + +L + LR+ + + + + Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALK 132 Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165 + + + A G + + + G+ + + Sbjct: 133 QQGDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + + Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250 Query: 226 EIGTLGVVVGKKA 238 G VV A Sbjct: 251 LEQATGTVVQAAA 263 >gi|301169187|emb|CBW28784.1| predicted folate-dependent regulatory protein [Haemophilus influenzae 10810] Length = 280 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 13/243 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121 F L + + S +D L Y + S V +++ GV+ + T S IDE+ S Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 I LL+ T D K + I G+ + + + P + + IS Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI----LTDDIEIGTLGVVVG 235 TKGCYIGQE V+R ++R ++ I GS I + + GT+ V Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAKIGSEIEMQLEANWRKTGTITSAVN 239 Query: 236 KKA 238 Sbjct: 240 LDG 242 >gi|254785325|ref|YP_003072754.1| folate-binding protein [Teredinibacter turnerae T7901] gi|237684991|gb|ACR12255.1| folate-binding protein [Teredinibacter turnerae T7901] Length = 323 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 105/294 (35%), Gaps = 32/294 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++LS+ I + G FLQ T D A +G++ F+ +KI + Sbjct: 25 LIHLSDYRLIVITGPDGEKFLQGQTTCDFRRFEKHQWLRGAHCNAKGRMHSTFVAAKIGD 84 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110 L + S +S + L Y + S + V + + H Sbjct: 85 QQIGLRVHASIAESALKALQKYIVFSKAEARVHTALLVGVLGDAAETTLPFSLPDVGHCD 144 Query: 111 SNSSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 +++ F R A L + + + + + ++ GI D + + Sbjct: 145 TSAGFPVLRLEAAAAELWLLNDTHAGIPDQLPGVWAHPECWQQYLLDKGIADVTAESV-E 203 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPI 220 + P + L++ +S KGCY GQE+V+R+ +R ++K + D G + Sbjct: 204 ELLPQELNYQLVDAVSFDKGCYTGQEIVARMHYRGKLKKHLYLAETDLSADSTLGFGMDV 263 Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 + + +G + + LA+ + D A + L + G + P Sbjct: 264 VGEKGSVGKVITATRLGQNRWRLLALVQ----DDATQNSAHLALAGQPILTWKP 313 >gi|332528358|ref|ZP_08404358.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella gracilis ATCC 19624] gi|332042229|gb|EGI78555.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella gracilis ATCC 19624] Length = 317 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 108/306 (35%), Gaps = 48/306 (15%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++ G+ A FLQ+ +T D L AR +A + QG++ F+ K+ D Sbjct: 10 PLPHLGVLRASGEEATKFLQSQLTNDFALLGANQARFAAFCSAQGRMQASFIGVKLAADD 69 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----PINGVVLSWNQEHTFSNSSFI---- 116 +L + + + +L + LR+ V + + G+ Q HT + Sbjct: 70 ILLVCSQDLLERTLKRLSMFVLRAKVKLSDATASFALYGLAGDAVQAHTPGAGALPAPWT 129 Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 D+R + A L T E A + + + G+ Sbjct: 130 CQSVNDETRLIHLHPAVKGDDRAARALWLAPATTPAPEATALAHEDWLWGEVLSGVA-MV 188 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--------- 208 + P + + GI+ KGCY GQEVV+R Q R I++R + + Sbjct: 189 SAPTFEAFVPQMLNYESIEGINFKKGCYPGQEVVARSQFRGAIKRRALRVRSPVALSAGQ 248 Query: 209 --GTDDLPPSGSPILTDDIEI--GTLGVVVGK-KALAIARIDKVDHAIKKGMALTVHGVR 263 P ++ + G G G A+ + ++ ++ T G Sbjct: 249 DIFDAAAPEEACGVVAQAAKAPQGQRGSPEGGFDAIVVLQLAHAQAQLQ-----TADGAA 303 Query: 264 VKASFP 269 + S P Sbjct: 304 LT-SLP 308 >gi|254362022|ref|ZP_04978151.1| possible GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica PHL213] gi|261491670|ref|ZP_05988252.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494211|ref|ZP_05990711.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093573|gb|EDN74547.1| possible GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica PHL213] gi|261310114|gb|EEY11317.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312685|gb|EEY13806.1| putative GCV family glycine cleavage complex aminomethyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 296 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 7/223 (3%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS I++ G A +LQ +T DV + ++ P+GK+ + + E Sbjct: 16 CVPLSQYCLIEIAGVDAEKYLQGQLTCDVAKISVGEHTLTSHCDPKGKMSALLRLYRAEN 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + F+ I RS + +L Y + S V ++ + + R + Sbjct: 76 EKFMAIIHRSLLPEALTQLKKYAVFSKVTFTELDTPLYGMAGEAAFAKLSENMTALRLTT 135 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLT 181 WG + +D + + + I GI + P + L IS T Sbjct: 136 GQPRAI-VWGEELETTADEQLWTLMDIQDGIPVLLQQ-NQFELIPQATNLQALESAISFT 193 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220 KGCYIGQE V+R ++R ++ + G LP S I Sbjct: 194 KGCYIGQETVARAKYRGANKRALFTLAGNFESEISLPEVASAI 236 >gi|254467880|ref|ZP_05081286.1| glycine cleavage T protein [beta proteobacterium KB13] gi|207086690|gb|EDZ63973.1| glycine cleavage T protein [beta proteobacterium KB13] Length = 278 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64 L + S I++ G+ + FLQ +T DV K S + P+G++ + I ++ + ++ Sbjct: 6 LDHYSIIEISGEDHLDFLQGQLTNDVKK-NEKKFIYSGMCNPKGRLFAFLRILRVPDLNS 64 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQPINGVVLSWNQEHTFSNSS 114 L S D++ +L + LRS V+I+ I + + +Q+ + + Sbjct: 65 TFLVTPSSLADAIQKRLTMFVLRSKVVIQKAENFHLLGIIDDSPKIYIPTDQQLNLPDQT 124 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 L ++ NE DI + + I GI + + H +DL Sbjct: 125 NRSVIILNDSNLFNQI--KNEHSFEDISMWIKKDIEFGIPE-VMEKTQEKFLAHTCNLDL 181 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTL 230 ++ ++ KGCY GQE+V+R + + R L G +L +D IGT+ Sbjct: 182 IDAVNFKKGCYTGQEIVARTHYLGKPKHRSFYGVINSKLSFDYGEQVLENDRSIGTV 238 >gi|238787327|ref|ZP_04631126.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641] gi|238724589|gb|EEQ16230.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641] Length = 327 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLMSLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108 E +E RS D+ + +L Y + S V+I QP GV Q Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVISAQPDAVLLGVAGDQAQAALTPIFAELP 138 Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T + S ERF A ++ + + ++ K + L I Sbjct: 139 NAEHPVIQQGNSTLLHFSLPTERFLIVTDSEQAQQIVEKLADSAQ--LNNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDAD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGN 255 Query: 211 DD-LPPSGSPI 220 + +P +G + Sbjct: 256 ANRVPAAGEDL 266 >gi|307244858|ref|ZP_07526957.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253812|ref|ZP_07535666.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258268|ref|ZP_07540011.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854303|gb|EFM86509.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863296|gb|EFM95236.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867728|gb|EFM99573.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 279 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 22/275 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I++ G A +LQ +T DV L + P+GKI + + D F Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKISALIRLYRQAADKF 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122 I I +++L Y + S V PI GV N ++ + + Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181 + WG + +D + + + I GI + P + + N IS + Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKK 237 KGCYIGQE V+R ++R ++ + G D LP G + ++++G G Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRATGTI 234 Query: 238 ALAIARIDKV------DHAIKKGMALTVHGVRVKA 266 ++A +K+ ++ ++ A ++GV + Sbjct: 235 LNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 269 >gi|71907821|ref|YP_285408.1| glycine cleavage T protein (aminomethyl transferase) [Dechloromonas aromatica RCB] gi|71847442|gb|AAZ46938.1| Glycine cleavage T protein (aminomethyl transferase) [Dechloromonas aromatica RCB] Length = 339 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 38/274 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L++ I+ G+ A FL + T+D+ LP +A+ + T +G++ FL+ + +E Sbjct: 43 VPLTHLGLIEATGEDAKAFLHSQFTSDINHLPENLAQHAGWCTAKGRMQASFLVWRHDE- 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------TF 110 ++L + +++ +LL + LRS V + + ++L T Sbjct: 102 RYLLALSADLQEATQKRLLMFVLRSKVKLAALTDSTIMLGLAGPQAEEALADAALPCPTD 161 Query: 111 SNSSFIDERFSIADVLLHR-TWGHNEKIASDIKT-------------YHELRINHGIVDP 156 + ++ I + ++ + +R +E + + + L + Sbjct: 162 AMATVISDGVTVIRLDQNRFIISASESAMAPLWQKLTIKARPAGLPVWRWLDVQAAFP-L 220 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 T P A + + G+S KGCY GQEVV+R Q+ +++ +T L + Sbjct: 221 VTLATKEEFVPQMADFEKIGGVSFHKGCYPGQEVVARTQYLGKVKRHLYRLTSQQPL-KA 279 Query: 217 GSPILTDDIEIGTLGVVV--------GKKALAIA 242 G + + D + G V+ G +ALA+ Sbjct: 280 GDALHSPDNPDQSCGTVMTVAPSPAGGFEALAVV 313 >gi|51597485|ref|YP_071676.1| global regulator [Yersinia pseudotuberculosis IP 32953] gi|153946923|ref|YP_001399856.1| global regulator [Yersinia pseudotuberculosis IP 31758] gi|81638623|sp|Q666S2|YGFZ_YERPS RecName: Full=tRNA-modifying protein ygfZ gi|166979590|sp|A7FF28|YGFZ_YERP3 RecName: Full=tRNA-modifying protein ygfZ gi|51590767|emb|CAH22412.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|152958418|gb|ABS45879.1| putative aminomethyltransferase [Yersinia pseudotuberculosis IP 31758] Length = 330 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108 E +E RS D+ + +L Y + S V+I QP GV S + Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAPQPDAVLIGVAGSQAKTALAEIFTELP 138 Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T + S ERF A L+ + G + +D K + L I Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 256 ASRVPAAGEDL 266 >gi|256821968|ref|YP_003145931.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069] gi|256795507|gb|ACV26163.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069] Length = 312 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 112/283 (39%), Gaps = 30/283 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L + I+V G A FLQ +T D+ + + A QG++ F K + Sbjct: 27 ACELGHYGIIRVHGGDAHKFLQGQLTCDLDKVTDQQASLGGFCNVQGRLHGIFFTIKYGD 86 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FID 117 D ++L + + + L++KL Y + V + ++ + Q+ +N + + Sbjct: 87 D-YLLLVPKEGLEHLLNKLKMYAVFFKVELTDASLDFQIWGHTQKGATTNFAEDMSLVVT 145 Query: 118 ERFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDF 160 + ++ L+ + + IA +D+ + + I I + Sbjct: 146 RDKGVTEIHLNSLFNASFMIAEKEDGSAIIKALEGTTLADVNAWDYIEIQAHIP-LVFEE 204 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSP 219 + PH + + G+S KGCY GQE+V+R+ +R ++ ++ D G Sbjct: 205 TLEELLPHFIGLPQVGGVSFDKGCYTGQEIVARMHYRGKLKTHALLAYSKDTTTLTPGDK 264 Query: 220 I-LTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTV 259 + +D +G + V K A+ + D A++ + + Sbjct: 265 VHNENDKAVGDVIRSTVFDGKTYALISL--ADKAMESELTINA 305 >gi|294142438|ref|YP_003558416.1| glycine cleavage system T protein [Shewanella violacea DSS12] gi|293328907|dbj|BAJ03638.1| glycine cleavage system T protein, putative [Shewanella violacea DSS12] Length = 326 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 116/305 (38%), Gaps = 48/305 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + V G+ F+ +T D+ +L R A P+GK+L F + EDT Sbjct: 24 LSHLGLMSVTGEQGRSFIHGQVTTDISSLQSDQWRWGAHCDPKGKMLASFRTFSL-EDTL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121 + + + +L Y + S + N ++L E ++IDERF Sbjct: 83 FMMMPADILALDLPQLAKYAVFSKADLVDVTDNFLLLGVAGEQA---KTWIDERFGSDNN 139 Query: 122 ---------IADVLLHR----------------TWGHNEKIASDIKTYHELRINHGIVDP 156 I+ LL + + D + L I G + Sbjct: 140 TSIDKEVTVISGGLLLKDNDRFIIMMEETAAALLLTSISQEIVDATAWQALEIQSGYPNL 199 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213 S P + +NGIS KGCY+GQE ++R+++R ++ I++GT Sbjct: 200 AASH-QSQFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGTSSETVS 258 Query: 214 PPSGSPILTDD--IEIGTLGVVV--GKKAL--AIAR-----IDKVDHAIKKGMALTVHGV 262 + + DD GT+ VV G++ L A+ DK+ A + +LT+ + Sbjct: 259 LETRLELALDDGFKRTGTIIEVVQSGEQVLLTAVLPNDTQTSDKLRIAGDESSSLTIKPL 318 Query: 263 RVKAS 267 Sbjct: 319 PYSLE 323 >gi|160898827|ref|YP_001564409.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1] gi|160364411|gb|ABX36024.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1] Length = 315 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 29/281 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I+ G+ A FL +T D L + AR +A T +G++L F+ K +D Sbjct: 10 ASVSHLGVIRALGEDAAQFLHGQLTNDFALLDLQHARLAAFCTAKGRMLASFIGFKRSKD 69 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L DRS + +L + LR+ + + ++ Sbjct: 70 EILLLCDRSLLAPTLKRLSMFVLRAKCKLSDATAEFTLHGLAGGAAAQALGPAAVPWTKT 129 Query: 124 D------VLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTDFLPST 164 D + L+ G E A + + GI + + Sbjct: 130 DDGDASLIALYPAAGQPRALRVAPVGTPLPEGPALSEADWLWSEVASGIATLSAPVV-DA 188 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + + G++ KGCY GQEVV+R Q R +++R + L +G + T + Sbjct: 189 FVPQMLNYESVEGVNFKKGCYPGQEVVARSQFRGTLKRRAYLAHAQQPL-ATGMEVFTPE 247 Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMAL 257 G VV G A+ + D + AL Sbjct: 248 DLEQATGTVVQAAPAPGGGWDAIVSIQTSSADQPLLAHAAL 288 >gi|187928513|ref|YP_001899000.1| folate-binding protein YgfZ [Ralstonia pickettii 12J] gi|187725403|gb|ACD26568.1| folate-binding protein YgfZ [Ralstonia pickettii 12J] Length = 346 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 107/307 (34%), Gaps = 53/307 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDE----- 118 L+ D+ +L +L + LR+ + GV E + + E Sbjct: 93 LQTDKLIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVN 152 Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 R A W + + D + L Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLS 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++LL G+ KGCY GQE+V+R Q+R +++R Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEIVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + + G+VV G L ++D +D A G Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPM 330 Query: 257 LTVHGVR 263 LT+ + Sbjct: 331 LTLQELP 337 >gi|146294227|ref|YP_001184651.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella putrefaciens CN-32] gi|145565917|gb|ABP76852.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella putrefaciens CN-32] Length = 318 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 F+L + + + + +L Y + S + +L E Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139 Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 N + + + VL T + D + L I G + Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQALEIAAGYPNLAASHAHQ 199 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|238796535|ref|ZP_04640042.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969] gi|238719513|gb|EEQ11322.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969] Length = 330 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 34/246 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS D+ + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAAQPETVLLGVAGAQARVALAGLFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T + S ERF A L+ + H + ++ K + L I Sbjct: 139 SAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVDKLADHAQ--LNNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDAD-TSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGH 255 Query: 211 DDLPPS 216 PS Sbjct: 256 ASRVPS 261 >gi|52424309|ref|YP_087446.1| hypothetical protein MS0254 [Mannheimia succiniciproducens MBEL55E] gi|52306361|gb|AAU36861.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 277 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 7/221 (3%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 ++L+ I++ G + FLQ +T DV L + +A P+GK+ F + ++ Sbjct: 3 KLIHLTQYKLIELTGVDSEKFLQGQLTCDVTKLKTGDSTLTAHCDPKGKVSSVFRLIRVA 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 ++ F L + +D+L Y + S V + + FS S ++ Sbjct: 63 QEQFYLLFRTDLLPAGLDQLKKYAVFSKVAFAEPEVQLAGVIGENCGQFSASFVVNS--G 120 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISL 180 A +L++ + + + + + I G + + P + + +S Sbjct: 121 NAAILIN--PAERLEFNASAEAWDCVEIQRGYPILSAK-TQNEFIPQALNLQCIEQAVSF 177 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220 KGCYIGQE V+R ++R ++ I +P G I Sbjct: 178 QKGCYIGQETVARAKYRGTNKRAMFIFKARSQIIPEIGGEI 218 >gi|332160499|ref|YP_004297076.1| putative global regulator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607033|emb|CBY28531.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Yersinia enterocolitica subsp. palearctica Y11] gi|325664729|gb|ADZ41373.1| putative global regulator [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863456|emb|CBX73575.1| tRNA-modifying protein ygfZ [Yersinia enterocolitica W22703] Length = 330 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TAD+ LP A +GK+ + Sbjct: 20 LTLISLDDWVLVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS D+ + +L Y + S V+I QP ++ Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVIAAQPDAVLLGVAGAQAKAALAEVFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T S ERF A L+ + + ++ K + L I Sbjct: 139 NADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKL--TDRAQFNNSKQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGFPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGH 255 Query: 211 DD-LPPSGSPI 220 + +P +G + Sbjct: 256 ANRVPAAGEDL 266 >gi|170718457|ref|YP_001783673.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus somnus 2336] gi|168826586|gb|ACA31957.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus somnus 2336] Length = 277 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 89/251 (35%), Gaps = 13/251 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L I V G A FLQ +T DV L + +A P+GK+ F + + E Sbjct: 2 LINLKQYGLIYVEGVDAEKFLQGQLTCDVTKLAIGQSTLTAHCDPKGKVNSLFRLIRHAE 61 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 F L I + + + +L Y + S V + V + + I + I Sbjct: 62 QQFYLLIRQDLLNHGLAQLKKYAVFSQVTFSEKNWTIVGM---LDQDLKECGAISPQIRI 118 Query: 123 -ADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 W + D + + L + G P + + I Sbjct: 119 DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTI-IGQGEFIPQALNLQEIEQAI 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVV 233 S KGCYIGQE ++R ++R I ++ ++ T L G+ I + G + Sbjct: 178 SFQKGCYIGQETIARAKYRGINKRAMYLLQAKTAALVEIGTEIEMQLEHAWRKTGCILSA 237 Query: 234 VGKKALAIARI 244 V + ++ Sbjct: 238 VNLNGILYLQV 248 >gi|197334522|ref|YP_002156896.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11] gi|226730811|sp|B5FAI0|YGFZ_VIBFM RecName: Full=tRNA-modifying protein ygfZ gi|197316012|gb|ACH65459.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11] Length = 318 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 26/245 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +T DV++L +GK+ F + D + Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFHHN-DGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSFIDER 119 L +S ++ + ++ Y + S V I I L W +HT SN++ + Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDDILLGFTGDKALEWINQHTDSNANVRVSK 143 Query: 120 F------SIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165 F S LL T E++ S D + I H + + D L + Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQLD-DQLCNEH 202 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ +++G + P +G I + Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGISEAQPSAGDAI---E 259 Query: 225 IEIGT 229 +G Sbjct: 260 RSVGE 264 >gi|117921854|ref|YP_871046.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. ANA-3] gi|117614186|gb|ABK49640.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. ANA-3] Length = 318 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 30/276 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK++ F I+E Sbjct: 21 LANLSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMIASFRTFAIQE 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108 ++ + R + + +L Y + S + +L E Sbjct: 81 -ALLMLLPRETIEVDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQATQFVTQHFGEITE 139 Query: 109 --TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 T I +RF + T E D + L I G + + Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATTLVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPI 220 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT S I Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSSDINLESALEI 258 Query: 221 LTDD--IEIGTL--GVVVGKKAL--AIARIDKVDHA 250 +D + G + V G + L A+ D + A Sbjct: 259 ELEDGYRKGGQIIEFVQRGNQVLLTAVLANDTANDA 294 >gi|309782013|ref|ZP_07676743.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA] gi|308919079|gb|EFP64746.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA] Length = 346 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 107/307 (34%), Gaps = 53/307 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDE----- 118 L+ D+ +L +L + LR+ + GV E + + E Sbjct: 93 LQTDKLIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVN 152 Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 R A W + + D + L Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRQRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLS 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++LL G+ KGCY GQE+V+R Q+R +++R Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEIVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + + G+VV G L ++D +D A G Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPM 330 Query: 257 LTVHGVR 263 LT+ + Sbjct: 331 LTLQELP 337 >gi|91794306|ref|YP_563957.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella denitrificans OS217] gi|91716308|gb|ABE56234.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella denitrificans OS217] Length = 318 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 28/260 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +++ LS+ I++ G+ A F+ +T D++++ + R A P+GK++ F I + Sbjct: 17 INAARLSHFGMIEITGEQAKTFINGQVTTDIISMTDEEWRWGAHCDPKGKMIASFRIFLL 76 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------ 108 E ++ + +S + +L Y + S + + +L E Sbjct: 77 GE-RLLMLMPKSTLALDLAQLKKYAVFSKAELTDVSDSWAILGLWGEKSVDLMTQHFGEL 135 Query: 109 -----TFSNSSFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHGIVDPNTD 159 + + + F +L + K + L I G + ++ Sbjct: 136 TQGLTATEQGAILKDNFGFMAILPQEQANIFIEQAKLELVAHKAWQALEIAAGYPNIDSQ 195 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPS 216 P + +NGIS TKGCY+GQE ++R+++R ++ I+ GT S Sbjct: 196 H-SGQYVPQMCNLQAVNGISFTKGCYMGQETIARMKYRGGNKRALYILEGTTQRTLSTES 254 Query: 217 GSPILTDD--IEIGTLGVVV 234 I + ++G + VV Sbjct: 255 QVEIQLEGGYRKVGNVIEVV 274 >gi|113461437|ref|YP_719506.1| aminomethyl transferase [Haemophilus somnus 129PT] gi|112823480|gb|ABI25569.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 277 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 88/251 (35%), Gaps = 13/251 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L I V G A FLQ +T DV L + +A P+GK+ F + + E Sbjct: 2 LINLKQYGLIYVEGVDAEKFLQGQLTCDVTKLAIGQSTLTAHCDPKGKVNSLFRLIRHAE 61 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 F L I + + + +L Y S V + V + + I + I Sbjct: 62 QQFYLLIRQDLLNHGLAQLKKYAFFSQVTFSEKNWTIVGM---LDQDLKECGAISPQIRI 118 Query: 123 -ADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 W + D + + L + G P + + I Sbjct: 119 DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTI-IGQGEFIPQALNLQEIEQAI 177 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVV 233 S KGCYIGQE ++R ++R I ++ ++ T L G+ I + G + Sbjct: 178 SFQKGCYIGQETIARAKYRGINKRAMYLLQAKTAALVEIGTEIEMQLEHAWRKTGCILSA 237 Query: 234 VGKKALAIARI 244 V + ++ Sbjct: 238 VNLNGILYLQV 248 >gi|127514126|ref|YP_001095323.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella loihica PV-4] gi|126639421|gb|ABO25064.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella loihica PV-4] Length = 322 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 108/293 (36%), Gaps = 31/293 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ A F+ +T D+ +L R A P+GK+L F + D Sbjct: 24 LSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCDPKGKMLASFRTFAHQ-DAL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERF 120 ++ + R + +L Y + S + + + + E + + E Sbjct: 83 LMMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFGVSGEQALAWIAQAFGEIAAELT 142 Query: 121 SIADVLLHR----------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 I ++ R ++ D + + I G+ + S Sbjct: 143 EIPGGVILRDGERYIIAVKCDTQAELLAKIDQPIYDFSAWQAIEIAAGLPNLYARH-QSQ 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS---PIL 221 P + ++GIS TKGCY+GQE V+R+++R ++ I+ G+ + + Sbjct: 202 FVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRALYIVQGSASVTIDDDSQLEMK 261 Query: 222 TDDIE----IGTLGVVVGKKA-LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +D E GT+ V + L ++ + D + + + V P Sbjct: 262 LEDDEGYRRAGTILEAVQRDGQLLLSAVLPNDTPLTAQLRVAGDEASVLTLAP 314 >gi|219871845|ref|YP_002476220.1| putative GCV family glycine cleavage complex aminomethyltransferase [Haemophilus parasuis SH0165] gi|219692049|gb|ACL33272.1| possible GCV family glycine cleavage complex aminomethyltransferase [Haemophilus parasuis SH0165] Length = 296 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 33/285 (11%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V L+ I+V G A +LQ +T DV L + P+GK+ F + + Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVAKLAVGEQSLTCHCDPKGKMSALFRLYRATA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------GVVLSWNQEHTFSNSSF 115 + F L I + + +L Y + S V ++ +N+ T + + Sbjct: 76 EQFFLIIQQDLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT---ACY 132 Query: 116 IDERFSIADVLLHRTWGHN-EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 +DE A WG + D + ++ + I G+ + P + L Sbjct: 133 LDEEPKRAIF-----WGDIVVETNGDSRLWNLIDIQQGVPLLYK-ANQFELIPQATNLQL 186 Query: 175 L-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----ITGTDDLPPSGSPILTDDIEIGT 229 L IS TKGCYIGQE V+R ++R ++ + G +LP S I ++++G Sbjct: 187 LDKAISFTKGCYIGQETVARAKYRGANKRAMFTFVGNVEGEIELPAIASSI---EMQLGE 243 Query: 230 LGVVVGKKALAIARIDK-------VDHAIKKGMALTVHGVRVKAS 267 G LA+ R + ++ ++ V V + Sbjct: 244 NWKSTGTI-LAVQRYQQQLWLQVVLNKELEPEANFRVGNVSLALF 287 >gi|254481212|ref|ZP_05094457.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148] gi|214038375|gb|EEB79037.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148] Length = 298 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 114/288 (39%), Gaps = 34/288 (11%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G + FLQ +T D + + A A PQG+++ F+++++ E+ + L + Sbjct: 1 MHIIGPDTLSFLQGQVTCDTREVSSQQAVVGAYCNPQGRMVCDFMLAQLGENHYALRLKA 60 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHT--FSNSSFIDERFSIADV--- 125 + + Y + S +E + + V+ W E +N+ F Sbjct: 61 NTLATAAKTFSKYIVFSKADLEAERQDWQVIGCWGNEAAKDLANAGFAIPEAKYQAATGD 120 Query: 126 ---------------LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLP 162 LL T H+E++ S + L+I GI + Sbjct: 121 GYVVVQMDDAGTQFELLIDTQNHSERLNSLGQNLNSGKESQWQALQIRAGIGRIEQANI- 179 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI- 220 + P D+ +S TKGCY GQE+V+R+ +R ++R + + + P +G+ + Sbjct: 180 EELLPQMLNYDVTGHVSFTKGCYTGQEIVARLHYRGKAKRRLYLGQFDETESPGAGAALF 239 Query: 221 -LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKA 266 + + +G L I + + +++G+ LT G ++ Sbjct: 240 STSAEQSVGVLVNAASADGGNICLLCATEKGVEQGLRLTSQQGAAIQV 287 >gi|290476407|ref|YP_003469312.1| hypothetical protein XBJ1_3430 [Xenorhabdus bovienii SS-2004] gi|289175745|emb|CBJ82548.1| putative enzyme [Xenorhabdus bovienii SS-2004] Length = 332 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 35/252 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L++ I V G A +LQ +T+D+ +L K SA +GK+ + Sbjct: 20 LALISLNDWGMISVTGADAEKYLQGQVTSDIASLNQKH-VLSAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQP 96 E +E R+ DS + +L Y + S V P Sbjct: 79 GEGFAYIE-RRTVLDSQLTELKKYAVFSKVTFAKDEESILLGVAGAGSRNALAEMFPTLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + ++ T + +F ERF + A L G + +D + + L I Sbjct: 138 DAETTVIQHETTTLLHFAFPAERFLLVTDQATAAQLTETLVGKLQAQLNDSQQWLALEIE 197 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G ++ + P + +L G IS KGCY GQE+V+R ++R ++ + G Sbjct: 198 AGFPVIDS-ASSAQFIPQATNIQVLEGSISFKKGCYTGQEMVARAKYRGANKRAMYWLAG 256 Query: 210 T-DDLPPSGSPI 220 T LP +G + Sbjct: 257 TASSLPVAGDDL 268 >gi|170728217|ref|YP_001762243.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908] gi|169813564|gb|ACA88148.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908] Length = 320 Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 110/299 (36%), Gaps = 37/299 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ + V G+ F+ +T D+ +L R A P+GK+L F + + Sbjct: 21 ANLSHMGLMSVTGEQGRSFIHGQVTTDISSLESNQWRWGAHCDPKGKMLASFRTFSVADA 80 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------- 109 F++ + + + + +L Y + S + + +L E Sbjct: 81 LFMM-MPKDTLAADLPQLAKYAVFSKADLVDVSADWTILGVAGEQAQEWVNNYFGEITQE 139 Query: 110 ---FSNSSFI--DERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 + ERF I + + + L I G+ + Sbjct: 140 LTEIPGGVLLKDGERFIIIIENAPSEPLLSSINTPIQESSAWQALEIQAGLPNLGVSH-Q 198 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSP 219 P + +NGIS KGCY+GQE ++R+++R ++ I++GT S Sbjct: 199 GQFVPQMCNVQAINGISFKKGCYMGQETIARMKYRGGNKRALYILSGTSSQTLALDSRLE 258 Query: 220 ILTDD--IEIGTL--GVVVGKKAL--AIARID-----KVDHAIKKGMALTVHGVRVKAS 267 + +D ++GT+ V G + L A+ D K+ A + +LT+ + Sbjct: 259 LAIEDGFKKVGTIIELVQSGDQVLLSAVLPNDTENSAKLRVADDETSSLTIQPLPYSLE 317 >gi|119943855|ref|YP_941535.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas ingrahamii 37] gi|119862459|gb|ABM01936.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas ingrahamii 37] Length = 325 Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 36/266 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L++ + V G+ I FLQ +T D+ L +A PQGK+ F + + Sbjct: 18 LCPLTSWDLLSVTGEDRITFLQGQLTCDLTILKPGEQTLAAQCNPQGKVWSIFRVVVLN- 76 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTF 110 D +L +S + +L Y S V I+ + + ++N T Sbjct: 77 DRILLIQPKSVTAKQLPELQKYATFSKVEIKKETEYQLLGLAGCKSAANIAKNFNISATH 136 Query: 111 SNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGI 153 S +D + + L+ ++ D+K ++ + I GI Sbjct: 137 EESHLLDDDQGVIIKQPYPSLRYLMIVKNQQATQLTEDLKDQASVYDDSLWNAMNIAAGI 196 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDD 212 + P + LNGIS TKGCYIGQE ++R ++R ++ I+TG + Sbjct: 197 AFIEEE-TSGLFIPQMLNLQALNGISFTKGCYIGQETIARTKYRGANKRALFILTGRATE 255 Query: 213 LPPSGSPI----LTDDIEIGTLGVVV 234 P +G + + +GT+ Sbjct: 256 APKAGQNVKVLLNNNWKRVGTIISGC 281 >gi|241663067|ref|YP_002981427.1| folate-binding protein YgfZ [Ralstonia pickettii 12D] gi|240865094|gb|ACS62755.1| folate-binding protein YgfZ [Ralstonia pickettii 12D] Length = 346 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 106/307 (34%), Gaps = 53/307 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDE---- 118 L+ D++ +L +L + LR+ + + E + + + Sbjct: 93 LQTDKAIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPEAADALREAGAVLPEPDTVN 152 Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 R A W + + + L Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQHAWKTLSSRLSLVGTEVWDWLS 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++LL G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + + G+VV G L ++D +D A G Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPV 330 Query: 257 LTVHGVR 263 LT+ + Sbjct: 331 LTLQELP 337 >gi|167855722|ref|ZP_02478478.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755] gi|167853178|gb|EDS24436.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755] Length = 296 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 103/278 (37%), Gaps = 19/278 (6%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V L+ I+V G A +LQ +T DV L + P+GK+ F + + Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVAKLAVGEQSLTCHCDPKGKMSALFRLYRATA 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + F L I ++ + +L Y + S V + + + E + + + Sbjct: 76 EQFFLIIQQNLLPEALVQLKKYAVFSKVTFTELD-QALFGTTSGEIIAKFNENVTACYLD 134 Query: 123 ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180 + WG + D + + I G+ + P + L IS Sbjct: 135 EEPKRTIFWGDIAVEANGDGSLWDLIDIQQGVPLLYK-ANQFELIPQATNLQQLDKAISF 193 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMI----ITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 TKGCYIGQE V+R ++R ++ + G +LP S I ++++G G Sbjct: 194 TKGCYIGQETVARAKYRGANKRAMFTFVGNVEGEIELPAVASSI---EMQLGENWKNTGT 250 Query: 237 KALAIARIDK-------VDHAIKKGMALTVHGVRVKAS 267 LA+ R + ++ + V VR+ Sbjct: 251 I-LAVQRYQQQLWLQVVLNKELDPEANFRVGNVRLALF 287 >gi|120597634|ref|YP_962208.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. W3-18-1] gi|120557727|gb|ABM23654.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sp. W3-18-1] Length = 318 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 F+L + + + + +L Y + S + +L E Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139 Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163 N + + + VL T + D + L I G + Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQVLEIAAGYPNLAASHAHQ 199 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248 >gi|68171279|ref|ZP_00544680.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia chaffeensis str. Sapulpa] gi|88657580|ref|YP_506966.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999294|gb|EAM85942.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia chaffeensis str. Sapulpa] gi|88599037|gb|ABD44506.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 278 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 22/280 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L ++S I G+ L T +VL L A S +L+P G+ + F I + + Sbjct: 5 IILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGK- 63 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114 +L+ ++++ +I K L YKL+ ++I+ + V + ++ + Sbjct: 64 YVLLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTI 123 Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 F D R S + + + + + E + Y LRIN+ + D D + T FP Sbjct: 124 FFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTSFPL 183 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 M + I KGCYIGQE V+R+ +R ++K I + ++ EIG Sbjct: 184 QFRMAQFHAIDFNKGCYIGQETVARM-YRAGVKKNIYTIISEHQSF-CDTKVMCAQQEIG 241 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 L VG L + I L + G +VK Sbjct: 242 RLLSNVGNIGLCLLDISSEHDF----CNLKIGGAKVKILL 277 >gi|238752998|ref|ZP_04614457.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380] gi|238708786|gb|EEQ01045.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380] Length = 327 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 34/249 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP+ A +GK+ + Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPHDRHVLCAHCDAKGKMWSNLRLFYR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS ++ +++L Y + S V I QP ++ Sbjct: 80 GEGLAFIE-RRSVLNNQLNELKKYAVFSKVAIAAQPEAVLLGIAGAEAKTALAQIFAELP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T + S ERF +A L+ + G + ++ + + L I Sbjct: 139 NAEHPVIQQGDSTLLHFSQPAERFLLVTDAELAQQLVEKLAGSAQ--LNNSQQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + D + P + L+GIS +KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGLPIIDADI-SAQFIPQATNIQALDGISFSKGCYTGQEMVARAKYRGANKRALYWLAGN 255 Query: 211 DDLPPSGSP 219 P Sbjct: 256 ASRVPVAGE 264 >gi|68249068|ref|YP_248180.1| aminomethyltransferase related to GcvT [Haemophilus influenzae 86-028NP] gi|68057267|gb|AAX87520.1| predicted aminomethyltransferase related to GcvT [Haemophilus influenzae 86-028NP] Length = 280 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 19/247 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ I+V G +LQ +T+DV+ L +A P+GK+ + + K+ + Sbjct: 5 ISLTQYQLIEVQGADVEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L + + S +D L Y + S V +++ + + + I FS+ Sbjct: 65 QVFLLVKKDILPSALDALKKYAVFSKVSFDLRDWQIIGVIGEK------CGKITPHFSL- 117 Query: 124 DVLLHRTWGHNEK-----IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NG 177 ++ R+ NE D K + I G+ + + + P + + Sbjct: 118 EIDGQRSILLNETELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAVEQA 176 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGV 232 IS TKGCYIGQE V+R ++R ++ I T GS I + + GT+ Sbjct: 177 ISFTKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEVEIGSEIEMQLEANWRKTGTITS 236 Query: 233 VVGKKAL 239 V + Sbjct: 237 AVNLDGI 243 >gi|83748620|ref|ZP_00945639.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551] gi|207723529|ref|YP_002253928.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum MolK2] gi|207743121|ref|YP_002259513.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum IPO1609] gi|83724744|gb|EAP71903.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551] gi|206588730|emb|CAQ35693.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum MolK2] gi|206594518|emb|CAQ61445.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum IPO1609] Length = 346 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 106/314 (33%), Gaps = 53/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101 L+ D+ +L +L + LR+ + V Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKAKLRPMDEFIAITVAGPDAADALREAGAVLPDTEAVY 152 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148 Q T R A W + + + + L Sbjct: 153 TVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDWLG 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + ++ G+VV G L ++D +D A G A Sbjct: 272 VNAPT-SAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSVIHLATADGPA 330 Query: 257 LTVHGVRVKASFPH 270 LT+ + Sbjct: 331 LTLQHLPYTIPVAE 344 >gi|85059975|ref|YP_455677.1| putative global regulator [Sodalis glossinidius str. 'morsitans'] gi|118577998|sp|Q2NRF3|YGFZ_SODGM RecName: Full=tRNA-modifying protein ygfZ gi|84780495|dbj|BAE75272.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 328 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 36/250 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +T DV +L +A +GK+ + + Sbjct: 20 LTLISLEDWALVTLNGADTVKYLQGQLTCDVASLDADRFSFAAHCDAKGKMFSHLCVFHH 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS RDS + +L Y + S I ++ Sbjct: 80 HDGMAFIE-RRSVRDSQLAELKKYAVFSKTTITADDDAVLLGVAGFQAQAALGGLFTSVP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 ++ +Q+ T S RF ++ D L H+ G + +D + + L I Sbjct: 139 NAAHPVAHHQDTTLLYFSLPAPRFLLITTPAVRDALQHKLEGQAQ--LNDSQQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G D T F P A + L+GIS KGCY GQE+V+R ++R ++ + G Sbjct: 197 AGYP--VIDSANGTQFIPQAANVQALDGISFNKGCYAGQEMVARAKYRGANKRALYWLAG 254 Query: 210 TDDLPPSGSP 219 PP+ Sbjct: 255 KASHPPAAGD 264 >gi|59712704|ref|YP_205480.1| folate-dependent regulatory protein [Vibrio fischeri ES114] gi|75353458|sp|Q5E304|YGFZ_VIBF1 RecName: Full=tRNA-modifying protein ygfZ gi|59480805|gb|AAW86592.1| predicted folate-dependent regulatory protein [Vibrio fischeri ES114] Length = 318 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 26/245 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +T DV++L +GK+ F + D + Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFHHN-DGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSFIDER 119 L +S ++ + ++ Y + S V I I L W +HT SN++ + Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDEILLGFTGDKALEWINQHTDSNANVRVSK 143 Query: 120 F------SIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165 F S LL T E++ S D + I H + + + Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQIDAPLC-NEH 202 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ +++G + P +G I + Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGLSEARPCAGDAI---E 259 Query: 225 IEIGT 229 +G Sbjct: 260 RSVGE 264 >gi|89094638|ref|ZP_01167575.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92] gi|89081108|gb|EAR60343.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92] Length = 338 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 113/298 (37%), Gaps = 40/298 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L +Q + V G FLQ +T DV + + + A +G +L F + K E+ Sbjct: 33 IPLIHQRVLSVKGPDTEKFLQGQLTCDVAEVFSRGSALGAHCNIKGHMLSLFRLLKAGEE 92 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDER-- 119 +L + + DS + L Y + S I+G+ ++ F Sbjct: 93 EVLLRMSQDIFDSAANNLKKYIVFSKAEASEVSDEISGLGITGPGAEALVEQFFGRAPSE 152 Query: 120 ----FSIADVLLHRTWGH-------------------NEKIASDIKTYHELRINHGIVDP 156 +++ L+ R G+ +E + I GI D Sbjct: 153 DNGILPLSNGLVVRVPGNRFEIWMATAELCELLSKLPDEVSIGSTDAWVLSEIEAGIPDL 212 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215 + P L+G+S KGCY GQE+V+R+QHR ++K +I G D P Sbjct: 213 -REATQEAFIPQMTNFQALDGVSFKKGCYTGQEIVTRLQHRGQLKKPMYLIEVGGDKKPM 271 Query: 216 SGSPILTDDIE-IGTLGVVV---GKK--ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +G I + D G + + G + ALA+ + + L ++G V+ + Sbjct: 272 AGDVITSPDKPNAGQVVISAPINGGRYKALAVI-----VKTLAEKGDLLLNGSEVELT 324 >gi|269467784|gb|EEZ79542.1| aminomethyltransferase [uncultured SUP05 cluster bacterium] Length = 265 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 15/253 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+N+S +K+ G FLQ + D+ L + +A QGKI+ + K ++D Sbjct: 3 TQLTNRSLLKLSGGDTQSFLQGQFSNDIDALEGGAVQLNAYCQHQGKIIALLWVIKRDDD 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F L + + +L +K+ S+V I + L E D F + Sbjct: 63 -FYLSFPSDLAELVTKRLTMFKMMSDVTITDVSNEVIQLGVIDEEF-------DGAFKLN 114 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTK 182 D +E SD + + I +G+ + + P +D+ G+S TK Sbjct: 115 DQQSVALVDKHEFDLSDESNWEKACIENGMAEVYLN-TSEQFVPQLLNLDINEVGVSFTK 173 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKK 237 GCY GQEVV+R+ + ++R + T D+ ++ G+VV K Sbjct: 174 GCYPGQEVVARLHYLGKSKRRMRVFTCDADVNIGDELVVAGSKSAKASGIVVRCVKLDSK 233 Query: 238 ALAIARIDKVDHA 250 +L +A ++ Sbjct: 234 SLCLATVEVAHED 246 >gi|152978102|ref|YP_001343731.1| aminomethyltransferase [Actinobacillus succinogenes 130Z] gi|150839825|gb|ABR73796.1| aminomethyltransferase [Actinobacillus succinogenes 130Z] Length = 273 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 11/219 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + I+V G A +LQ +TADV L + +A P+GK+ F + ++ E Sbjct: 5 IELSQYTLIRVEGDDAESYLQGQLTADVTALAAGDSTFTAHCDPKGKMSAVFRLIRLSEK 64 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F I + +D+L Y + S V + V + E + +F+ Sbjct: 65 RFYALIRTCLLPAALDQLKKYAVFSKVAFTQEEAEPVGIIGETELP------VQAKFNNR 118 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTK 182 +L++ +D + I G T+ P + + +S K Sbjct: 119 AILIN--PQSAVAFNADSALWDLADIQQGYP-ILTEQSQFEFIPQALNLQAIEQAVSFHK 175 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGSPI 220 GCYIGQE V+R ++R ++ + TD +P G I Sbjct: 176 GCYIGQETVARAKYRGANKRAMYVFKAATDSIPECGGEI 214 >gi|221068070|ref|ZP_03544175.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1] gi|220713093|gb|EED68461.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1] Length = 318 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 87/247 (35%), Gaps = 20/247 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSAD 72 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111 +L DRS + +L + LR+ + + + + Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLTGQAAQHHAGAAAAPWTLS 132 Query: 112 --NSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165 + + + A G + + + G+ + + Sbjct: 133 QQGDAHVLALYPAAGNQRALWIGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + + Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250 Query: 226 EIGTLGV 232 G Sbjct: 251 LEQATGT 257 >gi|121996857|ref|YP_001001644.1| glycine cleavage T protein (aminomethyl transferase) [Halorhodospira halophila SL1] gi|121588262|gb|ABM60842.1| glycine cleavage T protein (aminomethyl transferase) [Halorhodospira halophila SL1] Length = 318 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 113/297 (38%), Gaps = 48/297 (16%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + V G A FLQ I+TAD+ K + + + TP+G++L + +D + L Sbjct: 28 YAVVAVTGDEAQDFLQRILTADIPPPAAKHSVLAGLCTPKGRLLALARLIPW-DDGYRLV 86 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS------- 121 + + + +L Y LRS V + + ++ + + ER Sbjct: 87 LPDDVAGATVSRLQMYVLRSRVTVAPPTPDWRLVRAAGPGAR---AVLAERCGHPLPEVD 143 Query: 122 -----IADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGIVD 155 AD+ + R G E+ ++D + + I G + Sbjct: 144 GGVSHSADMAIVRMPGTPERYCAVGPASPVQALEHALAEYLPSADTAAWRAIEIRAGQPE 203 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 P +D L G+S +KGC+ GQEVV+R +R +++R GT P Sbjct: 204 IRAP-GRELFIPQMVNLDRLGGVSFSKGCFPGQEVVARTHYRGKVKQRMFRAAGTGPAPA 262 Query: 216 SGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G I + G + G ALA R +++ A L+ G R++ S Sbjct: 263 DGCEIRDAEGQLAGHIVCAAEVPEGFVALASLREAQLETA-----PLSADGQRLRLS 314 >gi|325266245|ref|ZP_08132924.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC 33394] gi|324982207|gb|EGC17840.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC 33394] Length = 282 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 95/271 (35%), Gaps = 17/271 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L I+V G FL + D+ L K A + TP+G+++ L ++ Sbjct: 3 TLLPFFGVIRVTGDDRHEFLHNQFSNDIKNLSEKTACYATYNTPKGRVIANMLAYCADDA 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F++ + + + +L + LR+ V +E+ GV + S + S Sbjct: 63 VFLI-LAADLAEKVAKRLRMFVLRAKVQMEVLADWGVAGCLPENAPVVYPSEPKLQLSCN 121 Query: 124 DV-----------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 + L A+ ++ I G + T Sbjct: 122 EAGQIELPHGGCLTLAPKSDLPAHDAAAESAWNRHEILCGYP-WISAATSETCVAQMLNQ 180 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLG 231 + G+ KGCY GQE+++R Q+R +++ + P +G P+ E G + Sbjct: 181 HTIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAVAENAVPQP-AGVPVQDAQQAEAGIVI 239 Query: 232 VVVGKKALAIARIDKVDHAI--KKGMALTVH 260 G L + + H++ + G V Sbjct: 240 NQSGSLHLLVVKHAAAQHSMFAEDGSPFAVQ 270 >gi|269960415|ref|ZP_06174788.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834842|gb|EEZ88928.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 322 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSMLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 D + + +S + + ++ Y + S V IE + ++ F ++ +D Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVTIEESSDVVLGVAGENADAFISTLNVDSGD 139 Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161 + + LL T + + D + + I + D Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLVEDSQATLTTHELWTRFDIEAALPYVAAD-A 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G G + Sbjct: 199 QNEHIPQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AEALGEGAI 257 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 258 ELERSVGENWRSVGA 272 >gi|213405489|ref|XP_002173516.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275] gi|212001563|gb|EEB07223.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275] Length = 334 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 53/299 (17%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 + +++ + + G + FLQ + V+ + SA L + L+ + + D Sbjct: 27 FFADRRLVFIEGIDTVKFLQGLAANKVV---AGEPKYSAFLNAKRTQLVDN--VQGQGDA 81 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII------------------EIQPINGVVLSWNQ 106 F +EID ++ + + L ++LR+ V + E +G+V + Sbjct: 82 FAIEIDATRAAAFLQHLQRFQLRAKVRLAPVDPSRWCVQATWNDTREDSSDDGLVDTREH 141 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFLPST 164 T + D RF + + A ++ + Y RI G+ + + + Sbjct: 142 LITSPLTQLWDPRFPETNNVRRAIVPPTSAPAQELSMEAYKAFRIQKGVAEGQREIISGE 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----------- 213 FP ++ D L+G+ KGCY+GQE+ R R RKR + + Sbjct: 202 AFPLESNFDKLHGVHFQKGCYLGQELTYRSYQRGTTRKRILPFQLSKRPDDFSKRISYSS 261 Query: 214 ----PPSGSPILTDDIEI-------------GTLGVVVGKKALAIARIDKVDHAIKKGM 255 P+ + + + G + G L + R+D +D ++ G Sbjct: 262 SPFSVPAANELSLSEATGTDASTQTRTRRGPGRVLTTQGNIGLGLIRLDYIDQVLRWGE 320 >gi|294925549|ref|XP_002778949.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239887795|gb|EER10744.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 345 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 36/296 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSA-ILTPQGKILLYFL 56 L ++ IKV GK + FLQ + T D+ + P + + +A L+P+G++L L Sbjct: 25 PLKSRGLIKVSGKGTLNFLQGLCTQDISRVFGAKAEAPMEQSAAAAVFLSPKGRVLFDCL 84 Query: 57 ISK----------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100 + E++ ++++D D+++ + +++ + IE GV Sbjct: 85 MYSGVSLKPDSSEGIVSDDKGEESLVVDVDEGVLDNVMRLFIRHRVHLPLNIEKLDNLGV 144 Query: 101 VLSWNQEHTFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIV 154 + ++ + + D R + D+ L ++ A + Y LRI + Sbjct: 145 YWTPSKSQNGCDGDTEVPVYEDPR--VKDLGLRAILPKSDIDAESTEALYRRLRIGLVVP 202 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL- 213 + + P + P + +DL N I+ KGCYIGQE+ +R + +RKR + D+ Sbjct: 203 EGPKEMTPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKRLFGMRIDGDVD 262 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKASF 268 SG+ I+ D +IG + + + + I ++ KGM + V+A+ Sbjct: 263 VESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP--KGMQMNTKQAMVEATK 316 >gi|114561743|ref|YP_749256.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella frigidimarina NCIMB 400] gi|114333036|gb|ABI70418.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella frigidimarina NCIMB 400] Length = 320 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 23/228 (10%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L++ I++ G+ F+ +T D+ +L + A P+GK+L F I + Sbjct: 23 SLTHMGLIEITGEQGRSFIHGQVTTDITSLGTNEWKWGAHCDPKGKMLASFRTFSIGDSL 82 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFID----- 117 F+L + +S + +L Y + S + N + ++ +Q F+ +F D Sbjct: 83 FML-LPKSTLSLDLPQLQKYAVFSKAELADVSNNYQIIGIAGSQAQAFATENFGDVSQAI 141 Query: 118 ------------ERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 ERF I + + + D + L I G + + Sbjct: 142 NLVEQGVIIRDGERFIAIINNAAAETIISQSGQTLIDASAWQALEIKAGYPNIDAAH-SG 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + +NGIS TKGCY+GQE ++R+++R ++ II+GT Sbjct: 201 QYVAQMCNLQAINGISFTKGCYMGQETIARMKYRGGNKRALYIISGTT 248 >gi|242240709|ref|YP_002988890.1| folate-binding protein YgfZ [Dickeya dadantii Ech703] gi|242132766|gb|ACS87068.1| folate-binding protein YgfZ [Dickeya dadantii Ech703] Length = 328 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TAD+ L SA +GK+ + Sbjct: 21 TLISLEDWALVTLTGPDTVKYLQGQLTADITALQPHQHTLSAHCDAKGKMWSDLRLFHYG 80 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + +E RS R++ + +L Y + S + + N V+L + + Sbjct: 81 DGLAYIE-RRSVRENQLSELKKYAVFSKITLSTDD-NAVLLGAAGHEIRTQLATQFSSLP 138 Query: 122 IADVLLHRTWG-----------------------------HNEKIASDIKTYHELRINHG 152 AD + + G + +D + + L I G Sbjct: 139 DADTPVVQQDGATLLYLPQPTERFLLVLTPETAHSLVAAFEHRIAFNDSRQWLALDIAAG 198 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211 ++ + P + L IS TKGCY GQE+V+R ++R ++ ++GT Sbjct: 199 QPIIDS-ANSAQFIPQATNLQALQAISFTKGCYTGQEMVARAKYRGANKRALYWLSGTAT 257 Query: 212 DLPPSGSPI 220 LP +G + Sbjct: 258 SLPSAGDEL 266 >gi|294788261|ref|ZP_06753504.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC 29453] gi|294483692|gb|EFG31376.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC 29453] Length = 274 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 13/261 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L I+V G FL + D+ L A + TP+G+++ ++ Sbjct: 3 TLLPFFGVIEVSGDDRHDFLHNQFSNDINHLSENQACYATYNTPKGRVIANMIVVN-SGS 61 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L + + ++ +L + LR+ V ++I GV S + S + I Sbjct: 62 VIHLILAADLVEKIVKRLKMFVLRAKVQLDILSDWGVSGSLKDDAQPIFPSEPHLQLGIN 121 Query: 124 DV----LLH----RTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 ++ L H + NE + ++ I G T Sbjct: 122 ELGEIQLPHSGCLKIAPKNELPLHYVAAESRWNTHEILSGYP-WICAATTETCVAQMLNQ 180 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + G+ KGCY GQE+++R Q+R +++ I + + E G + Sbjct: 181 HNIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAIARNPNPQIAGAPVQDANGEEAGLVLN 240 Query: 233 VVGKKALAIARIDKVDHAIKK 253 VG L + + V ++ Sbjct: 241 SVGDLNLLVVKYGVVSSELRD 261 >gi|288941015|ref|YP_003443255.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180] gi|288896387|gb|ADC62223.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180] Length = 342 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 105/302 (34%), Gaps = 39/302 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I G A FLQ +T D+ L + SA + +G+IL F +++E T Sbjct: 38 LSHLGLIAARGADAASFLQGQLTNDIRELSASHTQLSAHCSQKGRILTLFRALRLDE-TI 96 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115 L+ + I +L + LR+ V + + + E + + Sbjct: 97 YLQTPMERVAESIQRLSRFILRAKVTLNDASDELIRIGLAGETAPALLAAQGLPVPERDN 156 Query: 116 ---------------IDERFSIAD--VLLHRTWG--HNEKIASDIKTYHELRINHGIVDP 156 RF + L W + ++ + L I G+ + Sbjct: 157 GLVQSDDVAVIRIPGPTPRFELIGPFEPLRALWEALAPQAAPANATDWTRLDIQAGLPN- 215 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215 D T P + ++G+S KGCY GQEVV+R+Q +++R + D PP Sbjct: 216 VYDRTVETFVPQMLNLQRIDGVSFNKGCYTGQEVVARMQFLGKLKRRMYLAEVERDAPPQ 275 Query: 216 SGSPI----LTDDIEIGTLGVVV--GKKALAIARI-DKVDHAIKKGMALTVHGVRVKASF 268 G + G + G + A+ + + + L G + Sbjct: 276 PGEELSAASSASQQTEGWVVDACPIGDRRHALLVVTETAAVDSGHDIRLGADGPTLSLRE 335 Query: 269 PH 270 P Sbjct: 336 PP 337 >gi|149192318|ref|ZP_01870526.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1] gi|148833851|gb|EDL50880.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1] Length = 323 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 21/243 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ +++ G +LQ +T DV++L + A +GK+ F + IE Sbjct: 26 LNRWGALEMTGDDRKSYLQGQVTCDVVSLEQNQSTFGAHCDAKGKVWSAFRLCHIENGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI--IEIQPINGVVLSWNQEHT---FSNSSFI---- 116 +++ +S + + +L Y + S V I +P+ GV+ + Q+ F S + Sbjct: 86 MIQ-PQSALEKELTELKKYAVFSKVELIISTKPLIGVMGTSAQQWINQQFPTSGAVRQNK 144 Query: 117 --------DERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 DER+ + L +E + + + I G+ + + Sbjct: 145 GSTAIQINDERWMLLVDGDLQSLLSSDSELLWVAESLWTKFDIEQGLPILEAE-QQNQHI 203 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 P + L+GIS KGCY GQE V+R ++R I ++ + G D P S I+ + Sbjct: 204 PQALNLQALDGISFNKGCYTGQETVARAKYRGINKRMLANVRGLLDSPLSDDDIIDIERS 263 Query: 227 IGT 229 +G Sbjct: 264 VGE 266 >gi|326794158|ref|YP_004311978.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1] gi|326544922|gb|ADZ90142.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1] Length = 305 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 27/267 (10%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+ FI V GK A FLQ +TADV + + A TP+G+++ FLI ++ ++ Sbjct: 18 SLTELGFIHVEGKDAQKFLQGQVTADVSKVTSGASSFGATCTPKGRVISNFLICQVADEQ 77 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------WNQEHTFSNSSFIDE 118 ++L + S + + Y + + S N E + + Sbjct: 78 YLLTLHSSLVEKTLAHFKKYAVFFKATLTDASDTYAAFSEYARSLDNDETPQDEYALLHP 137 Query: 119 RFSIADVLLHRT-------------WGHNEKIASDIKTYHELR-INHGIVDPNTDFLP-S 163 I DVL + H + A+ + R I+ + P + Sbjct: 138 TQKIGDVLSIQLNNTYFSETLSIVPAEHLQDKATTNE--EAHRVISLLTLRPFIELKDSE 195 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 I P M IS TKGCY GQE+V+R+++R +K +++ +L + Sbjct: 196 EILPQWFNMQRNGSISFTKGCYTGQEIVARMKYRGKSKKHMALLSSESELTTGMDVANQE 255 Query: 224 DIEIGTLGVVV----GKKALAIARIDK 246 IGTL V A AI +D+ Sbjct: 256 GKVIGTLHDVASFDSSYVAQAILNVDQ 282 >gi|226939930|ref|YP_002795003.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter hongkongensis HLHK9] gi|226714856|gb|ACO73994.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter hongkongensis HLHK9] Length = 326 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 99/267 (37%), Gaps = 35/267 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS+ + + G A FLQ ++ D+ + + A+ S+ T +G++L FL+ + E Sbjct: 26 LVPLSDFAVLDFSGADAETFLQGQLSNDIRQVSPQAAQWSSYSTAKGRMLANFLVWQ-ES 84 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 + L + ++ +L + LRS V Q + V+L Sbjct: 85 GHYQLMLSAGLAAAIDKRLNMFILRSKVS-HRQRDDLVLLGLTGPAAERVMQQSGLAVPA 143 Query: 110 ---------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 F+ A + L + + + + I G Sbjct: 144 TGLAVETLSEGCVIRLPEGRFVLALAPAAAMSLWPQLCAHGAKPAPMTNWTLSDIATGTP 203 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 T P A ++L+ G+S KGCY GQE+V+R Q+ +++R Sbjct: 204 -WITQATQEAFVPQMANLELIGGVSFQKGCYPGQEIVARTQYLGKVKRRMFRALADAQAM 262 Query: 215 PSGSPILT---DDIEIGTLGVVVGKKA 238 P G + + + IG + + V +A Sbjct: 263 P-GDELFSVETGEQAIGKVMLAVATEA 288 >gi|296135946|ref|YP_003643188.1| folate-binding protein YgfZ [Thiomonas intermedia K12] gi|295796068|gb|ADG30858.1| folate-binding protein YgfZ [Thiomonas intermedia K12] Length = 314 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 110/314 (35%), Gaps = 50/314 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++ Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---------------------- 100 + L +D S + + +L + LR ++ Sbjct: 65 EQIGLLLDASIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLAPPAQP 124 Query: 101 -----------VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 +L Q + + ER A L + ++R Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQAAQAALRAELAVLPALPPSEWALQDIR- 183 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ P +L+ G++ KGCY GQEVV+R Q+R +++R ++TG Sbjct: 184 -AGLPHLTA-ATQQLFVPQMLNFELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVTG 241 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK--------KALAIARIDKVDHA-----IKKGMA 256 + P G ++ GVVV ALA +I + +G Sbjct: 242 PAAMQP-GQELVHAADPGQPCGVVVNAAADTAGVWWALAELKIALAEQPGLHRGSAEGPE 300 Query: 257 LTVHGVRVKASFPH 270 L + + + P Sbjct: 301 LKLGALPYALTAPD 314 >gi|85712969|ref|ZP_01044008.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina baltica OS145] gi|85693207|gb|EAQ31166.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina baltica OS145] Length = 299 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 10/249 (4%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L++ + V G A FLQ +TA+V L SA P GK L F + + Sbjct: 16 LCPLASYGLLSVTGDDARSFLQGQLTANVNALKPGDLCYSAHCEPTGKTLSVFWLYCHSD 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDER 119 + F L + S + + Y + + V E + + ++ ++ N + + + Sbjct: 76 NEFWLILKHSAIAPSLAQFEKYGVFNKVTFEDKSSDLNLIGLVGSSETFELPNEADLIAK 135 Query: 120 FSIADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 + + +I SD K + L I ++ P + +G Sbjct: 136 LKVGSEPNQFVLVYKSEIESNSDEKLWDALEIERVRPQLISELTQQ-FVPQMLNVQAWDG 194 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK 236 I KGCYIGQE V+R+++ ++ ++GT +P G+ + + ++G G Sbjct: 195 IDFKKGCYIGQETVARMRYLGKQKRALFRVSGTAHVPFEVGAQV---ERKVGENWRRGGT 251 Query: 237 KALAIARID 245 +A+ R D Sbjct: 252 IIMAVNRTD 260 >gi|90412075|ref|ZP_01220082.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK] gi|90327053|gb|EAS43432.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK] Length = 329 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 109/274 (39%), Gaps = 34/274 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I + G +LQ +T DV++LP + A +GK+ F + Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPVNSSTLGAHCDAKGKMRTIFRLFNH 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116 E L+ +S D+ + +L Y + S V I+ + LS Q + F Sbjct: 84 NEGYGFLQ-RKSVMDTQLPELKKYAVFSKVDIDASNDVLLGLSGEQAQAVIDQHFPGNGD 142 Query: 117 -------------DER--FSIADVLLHRTWG-----HNEKIASDIKTYHELRINHGIVDP 156 D+R F+IA + HN SD + + + I Sbjct: 143 VRVITAGTAIKVNDDRWLFAIAPEQAEQLINTLVETHNSMQLSDSTLWDLYDVLYAIPRV 202 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PP 215 + P + ++GIS KGCY GQE V+R ++R I ++ I+TG P Sbjct: 203 DA-VTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPL 261 Query: 216 SGSPI---LTDD-IEIGTLGVV---VGKKALAIA 242 +G + + D+ + GTL +A+A+ Sbjct: 262 TGDALERSVGDNWRKGGTLLASYLYADDQAIALV 295 >gi|270264911|ref|ZP_06193175.1| putative global regulator [Serratia odorifera 4Rx13] gi|270041209|gb|EFA14309.1| putative global regulator [Serratia odorifera 4Rx13] Length = 328 Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 114/298 (38%), Gaps = 43/298 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L A +GK+ + Sbjct: 20 LTLISLEDWALVTLSGPDRVKYLQGQVTADIEALAADRHVLCAHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 ED LE RS DS + ++ Y + S + I + ++ Sbjct: 80 GEDFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAVDSEAVLLGVAGFQARAALAGVFNSLP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + E T + S ERF ++A+ L + E +D + + L I Sbjct: 139 DAEHQVVQDGETTLLHFSAPAERFLLVTTAAVAEQLTVKLNEQAE--LNDSQQWLTLDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + L GIS +KGCY GQE+V+R + R ++ + G Sbjct: 197 AGYPVIDA-ANSGQLIPQATNLQALEGISFSKGCYTGQEMVARAKFRGANKRALYWLEGN 255 Query: 211 DDLPPSGSPILTDDIEIG----TLGVVVGKKALAIARI---DKVDHAIKKGMALTVHG 261 P + L ++++G G V+ LA R+ +++ + L V Sbjct: 256 AGRVPLAAEDL--ELQLGDNWRRTGTVLAAGKLADGRLWVQAVLNNDLDADSKLRVRD 311 >gi|66811634|ref|XP_639996.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4] gi|74853999|sp|Q54NS1|CAF17_DICDI RecName: Full=Putative transferase caf17 homolog, mitochondrial; Flags: Precursor gi|60466925|gb|EAL64969.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4] Length = 408 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 47/262 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59 V L ++S IKV G A+ LQ + T ++ L + + L G++L +IS Sbjct: 15 VPLKSRSLIKVVGPDALKHLQGLTTNNLNRLKDNQSTNTSIYNGFLQGNGRLLFDSIISL 74 Query: 60 IEE---------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP- 96 E D+FI++ID S + + L YKLR+ + II++ Sbjct: 75 DREHHNGNPKPISMAPGSSDNSGLDSFIVDIDSSILEEAMAHLKQYKLRNKIDIIDVTEN 134 Query: 97 ------INGVVLSWNQEHTFSN------SSFIDERFSIADVLL----HRTWGHNEKIAS- 139 ++ + + F+ S +D R I V L ++ E+++ Sbjct: 135 FNVYSILDKTYKTVRDDSLFAQLEKDQCSVMMDPRHQIMGVRLLVPNNKQLVVEERLSKY 194 Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 D Y+ R++ GI ++ I P + DLLNG+ KGCY+GQE+ SR Sbjct: 195 ESKDETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHF 254 Query: 197 RNIIRKRPMIITGTDDLPPSGS 218 +IRKR + + S S Sbjct: 255 TGLIRKRIFPVVMSVKDVESAS 276 >gi|330797296|ref|XP_003286697.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum] gi|325083295|gb|EGC36751.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum] Length = 412 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 50/263 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA----RGSAILTPQGKILLYFLISK 59 V L ++S IKV G A+ LQ + T ++ L + + L G++L +IS Sbjct: 15 VPLKSRSLIKVVGSDALKHLQGLTTNNLNRLKDSQSSNSSIYNGFLQSNGRLLFDSIISL 74 Query: 60 IEE------------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94 +E D+FI++ID + + + L YKLR+ + II++ Sbjct: 75 DKEHSIKQKAEFVISNGNGNGNGNGVVDSFIIDIDNAVLNDAVAHLKQYKLRNKIDIIDV 134 Query: 95 QPINGVVLSWNQ-EHTFSNSSFI------------DERFSIADVLLHRTWGHNEKIAS-- 139 V ++ T N + D R I V L + I + Sbjct: 135 TDQYRVYSILDKTYKTVRNDELLSILEDEGCSVMSDPRHQIMGVRLLVPSNKSSSIENHL 194 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 D + YH R++ GI + ++ ++ P + DLLNG+ KGCY+GQE+ SR Sbjct: 195 AKYETMDEEIYHLFRLSQGIPEGRNEYQWGSVIPLEYNFDLLNGVDFHKGCYLGQELTSR 254 Query: 194 IQHRNIIRKRPMIITGTDDLPPS 216 Q +IRKR + D S Sbjct: 255 TQFTGLIRKRVFPVVMKVDNVES 277 >gi|293605094|ref|ZP_06687486.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553] gi|292816497|gb|EFF75586.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553] Length = 332 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 100/295 (33%), Gaps = 42/295 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI- 60 L + G A+ FL +T DV LP AR + T +G++L ++ + Sbjct: 17 PCAPLDDFLVFSASGADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRAA 76 Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSS 114 + + R ++L+ +L + LR+ V + +N GV S + + Sbjct: 77 PGADDAPQLYGLVRRDLSEALLKRLSMFVLRAKVKLAATGLNVAGVQASAQEAAALEAVT 136 Query: 115 FIDER---------------FSIADVLLHRTWGHNEKI------------ASDIKTYHEL 147 R AD L W +++ + + Sbjct: 137 GALPRTPWQRVDLPSGTWIAAPSADARLRWWWIASDEQLQQSSALAGVLSLAPAAHWQVA 196 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + GI P ++L+ G+S TKGCY GQEVV+R +R +++R Sbjct: 197 DLAAGIP-WIATATQDVFIPQTVNLELVEGVSFTKGCYPGQEVVARSHYRGTVKRRMAYG 255 Query: 208 TGTDDLPPSGS-------PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 T P + IG + + +A + A+ +G Sbjct: 256 TVEQPGEPGAALAGVDVFDATQPGEPIGRVVDAASEAGVASVLFETTLAALPEGD 310 >gi|121607991|ref|YP_995798.1| glycine cleavage T protein (aminomethyl transferase) [Verminephrobacter eiseniae EF01-2] gi|121552631|gb|ABM56780.1| glycine cleavage T protein (aminomethyl transferase) [Verminephrobacter eiseniae EF01-2] Length = 303 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 109/280 (38%), Gaps = 30/280 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I+V G+ A FL + +T D +L + AR +A L+ +G++ F+ + D Sbjct: 9 AALSHLGVIRVAGEDAGAFLHSQLTQDFSSLDMRQARLAAFLSAKGRMQASFIGLRRP-D 67 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 ++L R + + +L + LR+ + + + + + + +S A Sbjct: 68 EWLLLCSRDLLPATLARLSMFVLRAKARLTDASADFALYGLAGDTLAAVAGGAQPAWSKA 127 Query: 124 DV----LLHRTWGHNEKIA---------------SDIKTYHELRINHGIVDPNTDFLPST 164 D+ L+H N+ A + + G+ + + Sbjct: 128 DIGAASLVHLYPAANQPRALWVAPAGDPPPAGPALATALWLWSEVASGVA-TLSSPVAQV 186 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + + G+S KGCY GQEVV+R Q R +++R I D+ G+ + Sbjct: 187 FVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYIAHAEADI-AVGAEVFAAT 245 Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256 G VV G A+ +I A++ G A Sbjct: 246 DLTQPCGTVVQAAAAPGGGVDAIVSLQIAAAHQALQVGAA 285 >gi|260753760|ref|YP_003226653.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553123|gb|ACV76069.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 274 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 29/278 (10%) Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55 ++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGEPLWSALLTAQGKVLYDF 71 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ E + +++ + + D+LI +L Y+LR + IEI P V S N + SSF Sbjct: 72 ILWP-EGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSF 130 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R S + ++ A I + + R+ G+ + + +A L Sbjct: 131 PDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NG+S TKGCY+GQE +R+ R I +R +I L I D+++ Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDEKCRIYYSDLKL-------- 240 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 A+ + R+ + +T P W K Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266 >gi|56478511|ref|YP_160100.1| putative glycine cleavage T-protein (aminomethyl transferase) [Aromatoleum aromaticum EbN1] gi|56314554|emb|CAI09199.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Aromatoleum aromaticum EbN1] Length = 351 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 102/276 (36%), Gaps = 39/276 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L N I+ G+ + PFL + + DV L + A+ ++ +P+G++L L+ K E D Sbjct: 48 VPLVNLGIIRSRGEDSAPFLHNLFSNDVKNLSAEGAQWTSFNSPKGRMLASILLWK-EAD 106 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---FSNSSFIDE-- 118 L + +L+ KL Y LRS V + ++ + + + Sbjct: 107 GHALVMSADLLPALLKKLSMYVLRSKVKLADDGAETALVGVSGSEAGQVLARAGLAVPAA 166 Query: 119 -------------RFSIADVLLHRTWGHNEK----------IASDIKTYHELRINHGIVD 155 R + L+ G + + + + G+ Sbjct: 167 APTQTVTGDTRCIRLDDNNFLVALPVGEAPQAFGALLAAGATKAGTAAWQLAMVRAGVP- 225 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T +++ G+S KGCY GQE+V+R Q+ ++KR + D P Sbjct: 226 LITVPTQEEFVAQMLNYEIIGGVSFQKGCYPGQEIVARTQYLGKLKKRMYRVRIADGAEP 285 Query: 216 -SGSPILT---DDIEIGTLGVVV-----GKKALAIA 242 G+ + D G L V G +ALA+ Sbjct: 286 LPGADVFAPEFGDQSAGKLVNVAPSPEGGFEALAVM 321 >gi|238754568|ref|ZP_04615922.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473] gi|238707199|gb|EEP99562.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473] Length = 311 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 95/251 (37%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ + L + + + V G + +LQ +TA+V TL +A +GK+ + Sbjct: 1 MTLISLEDWALVTVTGADRVKYLQGQLTANVETLAPDQHVLTAHCDAKGKMWSDLRLFHR 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E +E R+ ++ + +L Y + S V P + ++L E+ + Sbjct: 61 GESFAFIE-RRNLLENQLAELKKYAVFSKVTFA-APADCILLGVAGENAREALAQSFPEL 118 Query: 121 SIAD---------VLLHRTWGH--------------------NEKIASDIKTYHELRINH 151 A+ LLH T ++ + + + L I Sbjct: 119 PTAEKSVVQCGETTLLHFTLPAERFLLVTEAIQVQNLIDKLGDQAQLNSSQQWLALEIEA 178 Query: 152 GIVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G D + P + L GI TKGCY GQE+V+R ++R ++ + G Sbjct: 179 GFP--VIDSPNSAQFIPQATNIQALAGICFTKGCYTGQEMVARAKYRGANKRALYWLAGQ 236 Query: 211 DD-LPPSGSPI 220 + +P +G + Sbjct: 237 AERVPEAGEDL 247 >gi|300722120|ref|YP_003711402.1| hypothetical protein XNC1_1126 [Xenorhabdus nematophila ATCC 19061] gi|297628619|emb|CBJ89197.1| putative enzyme [Xenorhabdus nematophila ATCC 19061] Length = 333 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 34/252 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G A +LQ +TAD+ +L +A +GK+ F + + Sbjct: 20 LTLISLDDWGMVTATGADAQKYLQGQVTADIASLNANQHVLTAHCDAKGKMWSNFRLFQR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNS---- 113 E +E RS ++ + +L Y + S V + GV + ++E + Sbjct: 80 GEGFAYIE-RRSLLETQLTELKKYAVFSKVTFAKDEESILLGVAGTGSREALATRFPTLP 138 Query: 114 -----------------SFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + ERF + A L + +D + + L I Sbjct: 139 DAESPVIQHETTTLLYLALPAERFLLVTDKTTATQLTETLVEQFQSQLNDSQQWLALEIE 198 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + + P + + N IS KGCY GQE+V+R + R ++ + G Sbjct: 199 AGFPVIDA-AGSAQFIPQATNLQAIENSISFKKGCYAGQEMVARAKFRGANKRAMYWLAG 257 Query: 210 T-DDLPPSGSPI 220 LP +G + Sbjct: 258 QASSLPVAGDDL 269 >gi|94500782|ref|ZP_01307311.1| aminomethyl transferase, putative [Oceanobacter sp. RED65] gi|94427104|gb|EAT12085.1| aminomethyl transferase, putative [Oceanobacter sp. RED65] Length = 294 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 106/289 (36%), Gaps = 22/289 (7%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + S +++ ++ + G + F+Q T D+ A +G+++ F +S I Sbjct: 4 LQSYSINDCDYLIIQGPDSAKFMQGQFTCDINQATSHQFLRGACCNAKGRMVASFDLSLI 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++D ++L + + D L + L Y + I ++ ++ F R Sbjct: 64 DKDQYLLVMAKGLADILQNHLKKYAVFFKAEI-VKKQFNAYHFDTITNSDLTEDFSQSRT 122 Query: 121 SI---------ADVLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPNTDFLPSTI 165 A + + I + + + RI G+ + + Sbjct: 123 GERLIKRQGFNAGFDVIQLSADASGIDATVNVKQPSQDVNLARIQAGLARVTPE-TSEEL 181 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P + L NG+S KGCY GQE+V+R+Q+ +++ + + G + D Sbjct: 182 IPQMLNLQLTNGVSFKKGCYTGQEIVARMQYLGKLKRHCYRVAF-NQAAEVGDSLFAGDK 240 Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 IGTL + G + LA+ ++ + G T V P Sbjct: 241 SIGTLVNLAANGDGFEGLAVIEDKHLNAPLTLGSQSTPIEVLCLPYEPQ 289 >gi|91227863|ref|ZP_01262036.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01] gi|91188373|gb|EAS74669.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01] Length = 322 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 97/255 (38%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +LQ +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNFGMITMIGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118 + +++ +S D ++++ Y + S V IE I GV E + S Sbjct: 81 HDGYGMIQ-PKSAIDVELNEIKKYAIFSKVTIEASDDVILGVAGVKADEFISTMSKTTGS 139 Query: 119 RFSIAD----------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161 ++ LL + ++I ++ I G+ + Sbjct: 140 VRAVDGGTAVQVAQDRWLLILSAPEAQQIVETTDAVFTTNELWNRFDIEAGLP-FVSASA 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 259 L-ERSVGENWRSVGA 272 >gi|300704089|ref|YP_003745691.1| aminomethyl transferase [Ralstonia solanacearum CFBP2957] gi|299071752|emb|CBJ43076.1| putative aminomethyl transferase [Ralstonia solanacearum CFBP2957] Length = 346 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 107/314 (34%), Gaps = 53/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL + +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLDQARLAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101 L+ D+ +L +L + LR+ + V Sbjct: 93 LQTDKLIAPALTRRLTMFVLRAKAKLRPMDEFIAITVAGPDAADALREAGAVLPDTEAVY 152 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148 Q T R A W + + + + L Sbjct: 153 TVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDWLG 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----KGMA 256 +G+ + ++ G+VV G L ++D +D AI G Sbjct: 272 VNAPT-SAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSAIHLATADGPV 330 Query: 257 LTVHGVRVKASFPH 270 LT+ + Sbjct: 331 LTLQHLPYAIPVAE 344 >gi|308188001|ref|YP_003932132.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1] gi|308058511|gb|ADO10683.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1] Length = 328 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 43/298 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +T DV L +A +GK+ + Sbjct: 19 LTLMSLDSWALVSITGADSTAYLQGQLTLDVAALDADHHSPAAHCDAKGKMWSNMRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E L I R RD+ + +L Y + S V + + ++ Sbjct: 79 GEGYAYL-IRRDLRDTQLTELKKYAVFSKVTMAADDESVLLGVAGFQARAALANLFDSLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + E T + ERF S A + +++ +D + + L I G Sbjct: 138 DSEKPVVQQGETTLLWFAHPAERFLIVTSQAQAETLKQKLNDDAQFNDSQQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + P + L+ IS KGCY GQE+V+R ++R ++ + G Sbjct: 198 IPVIDPATSVQ-FIPQATNLQALDAISFKKGCYAGQEMVARAKYRGANKRALYWLVGQAS 256 Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK--------VDHAIKKGMALTVHG 261 LP + +P+ ++++G G LA ++D +++ ++ L V G Sbjct: 257 HLPEANAPL---ELQMGERWRRTGSV-LAAVQLDDGISWIQVVLNNDLEPDSVLRVEG 310 >gi|254230558|ref|ZP_04923925.1| protein YgfZ [Vibrio sp. Ex25] gi|262393261|ref|YP_003285115.1| glycine cleavage T-protein [Vibrio sp. Ex25] gi|151936916|gb|EDN55807.1| protein YgfZ [Vibrio sp. Ex25] gi|262336855|gb|ACY50650.1| glycine cleavage T-protein [Vibrio sp. Ex25] Length = 322 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +LQ +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNFGMITMVGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118 D + + +S D + ++ Y + S V IE I GV E S S Sbjct: 81 H-DGYGMVQPKSAIDVELSEIKKYAIFSKVTIEASDEVILGVAGVKADELISSMSKTTGS 139 Query: 119 RFSIADVL-----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 + + + + + + ++ I G+ + Sbjct: 140 VRPVEGGTAVQVSQSRWLLILSASAAQQFIENTDAALTTNELWNRFDIEAGLP-FVSASA 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 259 L-ERSVGENWRSVGA 272 >gi|319779568|ref|YP_004130481.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9] gi|317109592|gb|ADU92338.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9] Length = 290 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 28/268 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61 + + +K+ G FLQ +T D+ + A+ QG++L ++ Sbjct: 3 NQFALLKLSGADVRNFLQGQLTQDINRVSAGQAQFFGYCNNQGRLLATGVMWSDSVDDTN 62 Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114 +++ + + +S L +L + LR+ V+IE Q + + + E +N Sbjct: 63 IDESIFMMVHKSIATLLQKRLSMFVLRAKVLIE-QVESSIQAVYEPESDLTNGGTPHFPL 121 Query: 115 -------------FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDF 160 F +I+ L+ + H D + I G+ TD Sbjct: 122 LHCDKGAGLFSVGFPSPNANISRKLIIKLIEHKGVEREDEDQKWATQDILSGLP-WITDK 180 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 +D++N IS KGCY+GQEV++R+ +++ ++R + ++ G+ I Sbjct: 181 TYEKFLAQSLNLDIINAISFNKGCYVGQEVIARLHYKSKPKRRAFPVRFSEHSLIEGADI 240 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVD 248 I G LA ++ ++ Sbjct: 241 YDFGSVINISHFEGGNYVLAEIQLSSLE 268 >gi|119776082|ref|YP_928822.1| hypothetical protein Sama_2950 [Shewanella amazonensis SB2B] gi|119768582|gb|ABM01153.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 321 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 103/284 (36%), Gaps = 38/284 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L++ + V G+ F+ +TAD+ L R A P+G++L F K+ Sbjct: 19 LTLSLLNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWGAHCDPKGRMLATFRTFKL 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +LE RS + + +L Y + S + +L + + F+ F Sbjct: 79 GDALMMLE-PRSALEVSLAQLKKYAVFSKAELVDMSSELTLLGVSGPEA---AGFVARHF 134 Query: 121 SIADVLLHRT------------------------WGHNEKIASDIKTYHELRINHGIVDP 156 A+ + T + + + L I G + Sbjct: 135 GTAEADVFSTEQGTVLKDGERFILILDKANACALIEKSGQPLYGAGVWQALEIRAGYPNI 194 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-- 214 S P + L GIS KGCY+GQE V+R ++R ++ I+ G P Sbjct: 195 AAGHA-SEYIPQMCNLQALGGISFNKGCYMGQETVARTKYRGGNKRALYILFGESQTPVR 253 Query: 215 -PSGSPILTDD--IEIGTLGVVV--GKKAL--AIARIDKVDHAI 251 S I + + G + VV G K L A+ D A+ Sbjct: 254 LESTLEIAVEGGYRKAGNIIEVVSRGNKVLMTAVLANDTAPDAV 297 >gi|299066793|emb|CBJ37987.1| putative aminomethyl transferase [Ralstonia solanacearum CMR15] Length = 346 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 103/314 (32%), Gaps = 53/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101 L+ D+ +L +L + LR+ + + Sbjct: 93 LQTDKLVAPALTKRLSMFVLRAKAKLRPMDEFIAITVAGPEAADALRAAGAVLPESDAPY 152 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 Q T R A W + + + L Sbjct: 153 AVAQQAATVGQQVGAVVRLPDAGSRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + + G+VV G L ++D +D A G Sbjct: 272 VDAPT-SAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATADGPV 330 Query: 257 LTVHGVRVKASFPH 270 LT+ + Sbjct: 331 LTLQSLPYAIPVAE 344 >gi|156975802|ref|YP_001446709.1| aminomethyltransferase [Vibrio harveyi ATCC BAA-1116] gi|166979588|sp|A7MTS4|YGFZ_VIBHB RecName: Full=tRNA-modifying protein ygfZ gi|156527396|gb|ABU72482.1| hypothetical protein VIBHAR_03546 [Vibrio harveyi ATCC BAA-1116] Length = 322 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSMLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 D + + +S + + ++ Y + S V IE + ++ F ++ D Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVTIEESSDIVLGVAGENADAFISTLNADSGE 139 Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161 + + LL T + + D + + I + D Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLLEDSQATLTTHELWTRFDIEAALPYVAAD-A 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G G + Sbjct: 199 QNEHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AEALGEGAI 257 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 258 ELERSVGENWRSVGA 272 >gi|157372133|ref|YP_001480122.1| putative global regulator [Serratia proteamaculans 568] gi|166979587|sp|A8GIQ4|YGFZ_SERP5 RecName: Full=tRNA-modifying protein ygfZ gi|157323897|gb|ABV42994.1| glycine cleavage T protein (aminomethyl transferase) [Serratia proteamaculans 568] Length = 330 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 34/249 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ LP +GK+ + Sbjct: 20 LTLISLEDWALVTLNGPDRVKYLQGQVTADIEALPADSHVLCGHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E LE RS DS + ++ Y + S + I ++ Sbjct: 80 GEGFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAADSEAVLLGVAGFQARAALAGVFNSLP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + E T + S ERF ++A+ L+ + H + +D + + L I Sbjct: 139 DAEHQVVQDGETTLLHFSLPAERFLLVTTAAVAEQLVDKL--HEQAELNDSQQWLTLDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L+GIS +KGCY GQE+V+R + R ++ + G Sbjct: 197 AGYPVIDA-ANSGQFIPQATNLQALDGISFSKGCYTGQEMVARAKFRGANKRALYWLEGK 255 Query: 211 DDLPPSGSP 219 P + Sbjct: 256 AGRVPQAAE 264 >gi|304396719|ref|ZP_07378599.1| folate-binding protein YgfZ [Pantoea sp. aB] gi|304355515|gb|EFM19882.1| folate-binding protein YgfZ [Pantoea sp. aB] Length = 328 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 43/298 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +T DV L +A +GK+ + Sbjct: 19 LTLMSLDSWALVSITGADSTAYLQGQLTLDVAALDADHHSPAAHCDAKGKMWSNMRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------IEIQP 96 E L I R RD+ + +L Y + S V + P Sbjct: 79 GEGYAYL-IRRELRDTQLTELKKYAVFSKVTMAADDECVLLGLAGFQARAALANLFDNLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHG 152 + + E T + ERF I L +++ +D + + L I G Sbjct: 138 DSEKPVVQQGETTLLWFAQPAERFLIVTSLSQAEALKQKLNDDAQFNDSQQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + P + L+ IS KGCY GQE+V+R ++R ++ + G Sbjct: 198 IPVIDPATSVQ-FIPQATNLQALDAISFKKGCYAGQEMVARAKYRGANKRALYWLAGQAS 256 Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK--------VDHAIKKGMALTVHG 261 LP + +P+ ++++G G LA ++D +++ ++ L V G Sbjct: 257 HLPEANAPL---ELQMGERWRRTGSV-LAAVQLDDGISWIQVVLNNDLEPDSVLRVEG 310 >gi|192361074|ref|YP_001982679.1| hypothetical protein CJA_2216 [Cellvibrio japonicus Ueda107] gi|190687239|gb|ACE84917.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 322 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 112/301 (37%), Gaps = 35/301 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L N + V G A FLQ IT D+ L + A +P+G++LL F +++ D Sbjct: 15 CHLPNTGLLLVEGPDAAKFLQGQITCDIRELADQKVLLGAQCSPKGRVLLNFYAVQLQPD 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 T L + R+ + L Y + S + ++ + S Sbjct: 75 TIALRLPRNILEQAQISLGKYIVFSKAKLRKADDAYAIIGLHSSRLDDFSNILGTIPHEP 134 Query: 114 -SFIDERFSIADVL-----------LHRTWGHNEKIAS-----DIKTYHELRINHGIVDP 156 ++ID I L L + +A ++ +I GI Sbjct: 135 LTWIDTPQGIIWRLDETHMELWLKSLTALAPLGQSLAEVASLRTENDWNLAQIQRGITCI 194 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPP 215 + P + + L+NG++ KGCY GQE+V+R+ +R ++ T P Sbjct: 195 TPE-TYEQFTPQELNLTLVNGVNFRKGCYTGQEIVARLHYRGHAKRHTYRYHLTSPQAPA 253 Query: 216 SGSPIL-TDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 GS I+ + + IG + + + LA + ++ A + + + + + P Sbjct: 254 PGSLIVNSAGVNIGHIINIASSGNNQFELLACVTDEHINEAQLRETGEKLQQLPLPYAIP 313 Query: 270 H 270 Sbjct: 314 S 314 >gi|163856818|ref|YP_001631116.1| hypothetical protein Bpet2506 [Bordetella petrii DSM 12804] gi|163260546|emb|CAP42848.1| conserved hypothetical protein [Bordetella petrii] Length = 377 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 43/274 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--- 59 L + + + G A+ FL +T DV LP AR S T +G++L ++ + Sbjct: 61 CAALPDYAVVAASGADALTFLHGQLTQDVAGLPADAARLSGYCTAKGRLLATLVLWRAQT 120 Query: 60 -------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---------- 102 E R D+L+ +L + LR+ V + + P+ + Sbjct: 121 MPEASDAAEAARVYALTRRDLADALVKRLSMFVLRAKVKLAVAPLQAAGVWCSPEGLASL 180 Query: 103 ----------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA----------SDIK 142 + Q + ++I + + + Sbjct: 181 QSAAGGALPTAAWQRAELATGTWIAAPSARGALRWWWIASEAQLQQAGALAAQLARGTPD 240 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + + G+ P +DLL+G+S TKGCY GQEVV+R +R +++ Sbjct: 241 QWRGDDLAAGLP-WVAAATQDLFIPQTLNLDLLDGVSFTKGCYPGQEVVARSHYRGTVKR 299 Query: 203 RPM--IITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + G D PP G+ I G V+ Sbjct: 300 RAAYGRLDGQADPPPPGTDIYDAAQPQEPCGRVI 333 >gi|300718207|ref|YP_003743010.1| global regulator [Erwinia billingiae Eb661] gi|299064043|emb|CAX61163.1| putative global regulator [Erwinia billingiae Eb661] Length = 327 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 32/257 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + V G + +LQ +T DV L +A +GK+ + Sbjct: 19 LTLISLEEWALVTVTGADRVSYLQGQVTLDVAALASNGHLPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E LE RS RD+ I +L Y + + V I+ ++ Sbjct: 79 GEGLAYLE-RRSLRDNQITELKKYAVFAKVAIQPDDEAVLLGVAGFQARSALSGFFTALP 137 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVL----LHRTWGHNEKIASDIKTYHELRINHG 152 + + T + ERF + R E +D + L I G Sbjct: 138 DAENPVIQQDDTTLLWFAAPAERFLLVTSREKADAVRKGLEGEAQLNDSTQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + + P + L+ IS KGCY GQE+V+R + R ++ + G Sbjct: 198 LPVIDAE-TSAQFIPQATNLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGAAG 256 Query: 213 LPPSGSPILTDDIEIGT 229 P+ + L ++++G Sbjct: 257 RVPAANDAL--EMKLGE 271 >gi|307129424|ref|YP_003881440.1| putative folate-dependent regulatory protein [Dickeya dadantii 3937] gi|306526953|gb|ADM96883.1| predicted folate-dependent regulatory protein [Dickeya dadantii 3937] Length = 326 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TADV TL A +GK+ + Sbjct: 19 TLISLDDWALVTLAGPDTVKYLQGQLTADVDTLQAGQHVLCAHCDAKGKMWSNLRLFHYG 78 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQPI 97 + LE RS RD+ + +L Y + S I + P Sbjct: 79 DGLAYLE-RRSIRDTQLAELKKYAVFSKTTIAADDNVVLLGAVGLDIRAHLAPLFDALPD 137 Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHG 152 + T + + ERF + + R E ++S D + + L I G Sbjct: 138 ADNAVVQQPGATLLHLAHPAERFLLV-LDAQRAAALIETLSSSVKLNDSRQWQALDIAAG 196 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ + P + L GIS TKGCY GQE+V+R ++R ++ + GT Sbjct: 197 QPIIDS-VNSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGTGA 255 Query: 213 -LPPSGSPI 220 P +G + Sbjct: 256 QAPAAGDEL 264 >gi|54310198|ref|YP_131218.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9] gi|81615002|sp|Q6LMR1|YGFZ_PHOPR RecName: Full=tRNA-modifying protein ygfZ gi|46914639|emb|CAG21416.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9] Length = 329 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 34/274 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I + G +LQ +T DV++LP + A +GK+ F + Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPINASIFGAHCDAKGKMRTIFRLFNH 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116 E L+ +S + + +L Y + S V IE + LS Q F Sbjct: 84 NEGYGFLQ-RKSVMEIQLPELKKYAVFSKVDIEASSDVLLGLSGEQAQAVVEQHFPGDGD 142 Query: 117 -------------DER--FSIADVLLHRTWG-----HNEKIASDIKTYHELRINHGIVDP 156 D+R F+IA + HN SD + + + I Sbjct: 143 VRVITAGTAIKVDDDRWLFAIAPEQAEQLINTLVETHNNVQLSDSTLWDLYDVLYAIPRI 202 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPP 215 + P + ++GIS KGCY GQE V+R ++R I ++ I+TG P Sbjct: 203 DA-VTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQFPF 261 Query: 216 SGSP----ILTDDIEIGTLGVV---VGKKALAIA 242 +G + + + GTL +A+A+ Sbjct: 262 TGDALERSVGDNWRKGGTLLASYLYADGQAIALV 295 >gi|269965775|ref|ZP_06179872.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269829643|gb|EEZ83880.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 322 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 95/255 (37%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +LQ +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNFGMITMIGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118 + +++ +S D + ++ Y + S V IE I GV E + S Sbjct: 81 YDGYGMIQ-PKSAIDVELSEIKKYAIFSKVTIEASDDVILGVAGVKADEFISTMSKTTGS 139 Query: 119 RFSIAD----------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161 + LL + ++I ++ I G+ + Sbjct: 140 VRPVDGGTAVQVAQDRWLLILSAPKAQQIVETTDAVFTTNELWNRFDIEAGLP-FVSASA 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 259 L-ERSVGENWRSVGA 272 >gi|15837670|ref|NP_298358.1| hypothetical protein XF1068 [Xylella fastidiosa 9a5c] gi|9106015|gb|AAF83878.1|AE003943_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 305 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 108/275 (39%), Gaps = 18/275 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L + +++ G + F A ++D L SA LTP+G++ F + + Sbjct: 30 TLFPLPSYEMLRISGADTLSFAHAQFSSDAQDLAIGKWHWSAWLTPKGRVTALFALYRPA 89 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117 E+ +L + + + +L Y R V I ++ +++ T + ++ +D Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERDLITTGTYDTPVHATGTQAAQLDGI 149 Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 ++ + L R T ++ + + + G+ + P Sbjct: 150 TELDVSGITLPRRLLLVPTAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVA 267 Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVH 260 V ALA+ ID +V + + Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAG 302 >gi|37527429|ref|NP_930773.1| putative global regulator [Photorhabdus luminescens subsp. laumondii TTO1] gi|81418630|sp|Q7N1C0|YGFZ_PHOLL RecName: Full=tRNA-modifying protein ygfZ gi|36786864|emb|CAE15929.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 329 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 30/248 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G +LQ +TAD+ L SA +GK+ + Sbjct: 20 LTLISLDDWGLVTATGPDTEKYLQGQVTADISALATNQHVLSAHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 E +E RS ++ + +L Y + S + + P Sbjct: 80 GESFAYIE-RRSVLENQLTELKKYAVFSKIALAQDENALLLGVAGKNCRQALSSFFPTLP 138 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 + ++ T + S ERF + + + ++ + + L I G Sbjct: 139 DADNAVVAHEATTLLHFSLPSERFLLVTNTATAEQLTEKLQAQLNNSEQWLALDIEAGFP 198 Query: 155 DPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 + P + L G+ KGCY GQE+V+R ++R ++ + G+ Sbjct: 199 IIDAANSTQ-FIPQATNLQALAGGVCFKKGCYTGQEMVARAKYRGANKRGMYWLAGSASK 257 Query: 213 LPPSGSPI 220 +P +G + Sbjct: 258 IPMAGDDL 265 >gi|56552584|ref|YP_163423.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4] gi|56544158|gb|AAV90312.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4] Length = 274 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 29/278 (10%) Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55 ++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDF 71 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ E + +++ + + D+LI +L Y+LR + IEI P V S N + SSF Sbjct: 72 ILW-AEGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSF 130 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R S + ++ A I + + R+ G+ + + +A L Sbjct: 131 PDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NG+S TKGCY+GQE +R+ R I +R +I L I D+++ Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDDKCRIYYSDLKL-------- 240 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 A+ + R+ + +T P W K Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266 >gi|323453978|gb|EGB09849.1| hypothetical protein AURANDRAFT_63050 [Aureococcus anophagefferens] Length = 307 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 107/302 (35%), Gaps = 42/302 (13%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + V G A + ++ T +V +A L +G++L ++ + + Sbjct: 2 HRAVLSVRGGDAAKLIHSLTTNNVTAWMESATPGLAAAFLNTKGRVLADAVLWRDGAEDI 61 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSSFIDE 118 +++ S +L+ L YKLRS+V ++ + V + + D Sbjct: 62 LVDCPASAAKALLRHLKMYKLRSDVKLKARDDLAVATFASPDAAAAAVAAGDVVAGGADP 121 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 R ++ Y R+ G+ + P + +D L + Sbjct: 122 RTALLG--GRCVAAAGAAPGEPAGAYAARRLALGVAEGAEVVGR---IPLNCNLDALRYV 176 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---------------PPSGSPIL-- 221 + KGCY+GQE+ +R + R +R+R M + D P +PI+ Sbjct: 177 AFDKGCYLGQELTARAKFRGEVRRRLMPVALQDAASAVLHNAARALPPAEPVPDAPIVGA 236 Query: 222 ---------TDDIEIGTLGVVVGK--KALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 +G + V G A+A+ ++D + + ++ P Sbjct: 237 LPAAGAKLLAAGKAVGEVVAVDGASTVAVAMLKLDFALSGDILDVDVEGTELKASPFVPA 296 Query: 271 WY 272 W+ Sbjct: 297 WW 298 >gi|167521794|ref|XP_001745235.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776193|gb|EDQ89813.1| predicted protein [Monosiga brevicollis MX1] Length = 364 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 102/295 (34%), Gaps = 55/295 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------------- 40 +++ + V G A+ FLQ + T D+L + Sbjct: 61 PHRAVLAVRGPEALTFLQGLTTQDLLPQEPEEPFELAEDDADTADTAADSSTAAATHPTK 120 Query: 41 --GSAILTPQGKILLYFLISKI---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95 + L +G+IL L E F E+D L L +KLR+ V + Sbjct: 121 PLHTMFLHAKGRILCDALAYPTLPTEPRGFYFEVDADMLAPLHKHLRSFKLRTKVSFD-- 178 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + D ++A +++ T D Y LR+ G+ + Sbjct: 179 -------------ALAPDVIGDPGRTLAALIVPCTL-EPVLSNDDGSIYAYLRLALGLSE 224 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 D + + P +A ++ NG+S KGCY+GQE+ +R + ++RKR + + D Sbjct: 225 GPQDHIDNKSLPLEANIEHWNGVSFKKGCYLGQELTARTHYSGMLRKRLLPMRIPDVQAA 284 Query: 216 --------SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 + GT+ V+G + + + R + + G Sbjct: 285 VRLSHYNGPLKVVTAAGKPAGTVHSVLGDRCIGLVRTAHLTEELVLQPPADAEGA 339 >gi|163802948|ref|ZP_02196835.1| hypothetical protein 1103602000581_AND4_13813 [Vibrio sp. AND4] gi|159173238|gb|EDP58066.1| hypothetical protein AND4_13813 [Vibrio sp. AND4] Length = 322 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 26/257 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N S I + G P+LQ +T DV++L + A +GK+ F + Sbjct: 21 LSISLLDNLSMITMVGDDKKPYLQGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----NSSF 115 + +L+ +S D + ++ Y + S V IE N VVL E+ + N+ Sbjct: 81 NDGYAMLQ-PKSAIDVELKEIKKYAVFSKVTIE--ESNDVVLGVAGENAEAFISSLNAEI 137 Query: 116 IDERFSIAD---------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTD 159 D R LL T + + + + + I + D Sbjct: 138 GDVRAIKGGTAVKVAPSRWLLALTAESAQSLVASSQATLTTNELWTRFDIEAALPYVAAD 197 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L GIS TKGCY GQE V+R ++R ++ I+ G G Sbjct: 198 -AQNDHIPQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AENLGEG 255 Query: 220 ILTDDIEIGTLGVVVGK 236 + + +G VG Sbjct: 256 TIELERSVGENWRSVGA 272 >gi|291618735|ref|YP_003521477.1| YgfZ [Pantoea ananatis LMG 20103] gi|291153765|gb|ADD78349.1| YgfZ [Pantoea ananatis LMG 20103] Length = 403 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 102/274 (37%), Gaps = 33/274 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + V G + +LQ +T DV L +A +GK+ + Sbjct: 94 LTLMSLDAWALVAVVGPDSTSYLQGQLTLDVAALDASHHLPAAHCDAKGKMWSNLRLFHR 153 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E L + R RD+ + +L Y + S V + ++ Sbjct: 154 AEGYAYL-VRRELRDTQLPELKKYAVFSKVTLTADDDVALLGVAGFQARAALANVFDTLP 212 Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + T + ERF S A + ++ +D + L I G Sbjct: 213 DSTTPVVQQGDTTLLWFAHPAERFLLVTSPAQADALKQTLADDAQFNDSTQWLALDIEAG 272 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + P A M L+ IS KGCY GQE+V+R ++R ++ ++G Sbjct: 273 IPVIGA-ATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQAS 331 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 P+ + L ++++G G LA ++D Sbjct: 332 HLPAANDSL--ELQMGERWRRTGTV-LAAVQLDD 362 >gi|316967725|gb|EFV52115.1| aminomethyl transferase family protein [Trichinella spiralis] Length = 488 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 14/238 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+N+ +KV G + LQ +++ DVL L + S +L QG+I+ L+ + E+ Sbjct: 31 CLLNNRKILKVTGPDRMALLQLVLSNDVLLLHEHRSLYSLMLNKQGRIMYDVLLFEDEDG 90 Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHT------FSNSS 114 + ++E D +I +L Y++R V + V + + NQ H + + Sbjct: 91 KSTLVECDADVHADVIAFILKYRMRKTVDVVADNSRSVYVYYLPNQAHIREPSIRLPDGT 150 Query: 115 FI--DERFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 I D R + I++ +K Y + R + + + + DF+P T FPH+ Sbjct: 151 LIAKDPRSEYLGFRIITESSLISTISAGCVTLKEYIDYRYSLALGEGSKDFIPGTCFPHE 210 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 G++ +KGCYIGQE+ +RI++ ++RKR M + D + + I Sbjct: 211 TNARQFKGMNFSKGCYIGQELTARIEYTGVVRKRFMPLLFHVDQLQKLCTVQYNSQVI 268 >gi|293394597|ref|ZP_06638891.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582] gi|291422906|gb|EFE96141.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582] Length = 329 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 34/249 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L +GK+ + + Sbjct: 20 LTLISLEDWALVTLNGPDTVKYLQGQVTADLDQLAADQHVLCGHCDAKGKMWSNLRLFRR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 E LE RS D+ + ++ Y + S V P Sbjct: 80 GEGFAYLE-RRSLADNQLAEIKKYAVFSKVTFSADNDAVLLGVAGFQARAALAGVFGQLP 138 Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 ++ + + T + S ERF +IA+ L + + +D + + L I Sbjct: 139 DAAHPVAQDGDTTLLHFSLPAERFLLVTTAAIAEQLCAKL--QEQAQLNDSQQWLTLDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + + P + L GIS +KGCY GQE+V+R + R ++ + G Sbjct: 197 AGYPIIDAP-NSAQLIPQATNLQALGGISFSKGCYTGQEMVARAKFRGANKRAMYWLAGK 255 Query: 211 DDLPPSGSP 219 P+ S Sbjct: 256 GSRVPAASD 264 >gi|255954107|ref|XP_002567806.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589517|emb|CAP95663.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255] Length = 438 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 127/359 (35%), Gaps = 91/359 (25%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFLIS 58 L+N+ I + G + FLQ +IT ++L +A L QG++L I Sbjct: 41 RLTNRGLISITGIDSTTFLQGLITQNMLVANDPNRSIRRTGAYTAFLNSQGRVLNDAFIY 100 Query: 59 KIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEH- 108 + E +++EID+++ L+ L +KLR+ + + + SW Sbjct: 101 PLPGAEAQGAESGWLVEIDKNQVPVLLKHLKKHKLRAKLKLRALEEGERTIWSSWKNHAE 160 Query: 109 -------------------TFSNSSFIDERFSIADVLLH-------RTWGHNEKIAS--- 139 T + ID R + RT+ +E + Sbjct: 161 PQRWAAYSLESESPSPFSPTSEIAGCIDTRAPGFGSRIITPGSDGLRTYFPDEAQVAGPE 220 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + +Y RI HG+ + + + + P MD+ GI KGCY+GQE+ R HR Sbjct: 221 VPLDSYTVRRILHGVAEGQAEVISGSALPLQCNMDMARGIDFRKGCYVGQELTIRTHHRG 280 Query: 199 IIRKRPMII---------------------------TGTDDLPPSGSPILTDDIEIGTLG 231 + RKR + + +G D+ +G+ + GT Sbjct: 281 VTRKRLLPVQLYDLGQDAQSAPDTLTYDPSFQLTFPSGEADIVKAGAA-TRRNRSAGTFL 339 Query: 232 VVVGKKALAIARIDKVDHAIKKGMA-----------------LTVHGVRVKASFPHWYK 273 +G LA+ R++ + G A + V V+A P W + Sbjct: 340 NGIGNIGLALCRLEVMTDIALMGEAPARPHEHHFKLSWAPEVEQPNEVGVRAFVPPWLR 398 >gi|317493828|ref|ZP_07952245.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918155|gb|EFV39497.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium 9_2_54FAA] Length = 328 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 37/252 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L++ + V G A +LQ +T DV L + +GK+ + Sbjct: 20 LTIMLLNDWQLVNVTGPDAGKYLQGQLTVDVAALTEQEHTLCGHCDAKGKMWSDLRLFHR 79 Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------ 101 E +++L RS ++ I +L Y + S + I V+ Sbjct: 80 AEGFSYLLR--RSVAENQIVELKKYAVFSKLTIAADTDAVVLGVAGFKAASALAPLFSQL 137 Query: 102 ------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRI 149 + ++E T + ++R+ S+A+ L+ + G + +D + + EL I Sbjct: 138 PDSTTPVVAHEETTLLYLAQPEDRYLVITSTSMAEALVEKLQGSAQF--NDSQQWVELDI 195 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + + + P + LNGI KGCY GQE+V+R ++R ++ + G Sbjct: 196 EAGQPVIDVE-NSGQLIPQATNLQALNGICFKKGCYTGQEMVARAKYRGANKRALYWLQG 254 Query: 210 TDD-LPPSGSPI 220 + +P +G + Sbjct: 255 SASRVPQAGEDL 266 >gi|304413501|ref|ZP_07394974.1| aminomethyltransferase folate-binding domain-containing hypothetical protein [Candidatus Regiella insecticola LSR1] gi|304284344|gb|EFL92737.1| aminomethyltransferase folate-binding domain-containing hypothetical protein [Candidatus Regiella insecticola LSR1] Length = 325 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV + + +A P+GK+ + Sbjct: 20 LTLMTLDDWVLVTITGVDRVNYLQGQVTADVAAMTAEQHIMTAHCDPRGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101 EE +E RS D+ + +L Y + S V I + + GV Sbjct: 80 EEGLVFIE-RRSVLDNQLKELKKYAVFSKVNISVDTKAVLLGVAGLTARETLATLFSTLP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF-SIADVLLHRTWGH---NEKIASDIKTYHELRINHG 152 + T + + ERF + D + W + ++ + L I G Sbjct: 139 NTKHPVVQQGITTLLHFTQPTERFLLVTDAFQAQQWIEILRSRTQFNNSNQWMALDIQAG 198 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + P + L GIS TKGCY GQE V+R Q+R ++ + G + Sbjct: 199 FP-IIDEKTSALFIPQATNIQTLGGISFTKGCYTGQETVARAQYRGANKRALYWLAGNAN 257 Query: 213 -LPPSGSPI 220 +P G + Sbjct: 258 RVPLPGDDL 266 >gi|268591706|ref|ZP_06125927.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131] gi|291312665|gb|EFE53118.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131] Length = 327 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 100/275 (36%), Gaps = 45/275 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-E 61 + L N I + G A +LQ +TAD+ TL A +A P+GK+ + + Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADIATLKQSHA-LTAHCDPKGKMWSDLRLFHHLD 80 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101 +++L S DS + +L Y + S V E +P +V Sbjct: 81 GYSYLLRT--SVADSQLAELKKYAVFSKVTFEKKPELKLVGVAGKGAREALATLFTALPD 138 Query: 102 ----LSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + + T + + ERF + + + I + + + L I G Sbjct: 139 AQNQVVTDDASTILHFALPTERFLVITNEETAQKMAQTLGAIQVNDEQWLALDIEAGFAI 198 Query: 156 PNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + P + L +GIS KGCY GQE+V+R + R ++ + GT Sbjct: 199 IDQQNSAQH-LPQATNLQALPDGISFKKGCYTGQEMVARAKFRGANKRAMYTLKGTGTTI 257 Query: 215 P---SGSPILTDDI--EIGTLGVVVGKKALAIARI 244 P G D GT+ LA R+ Sbjct: 258 PVVGEGVEWQLGDKWRRTGTV--------LAAIRL 284 >gi|28198265|ref|NP_778579.1| hypothetical protein PD0348 [Xylella fastidiosa Temecula1] gi|182680902|ref|YP_001829062.1| putative aminomethyl transferase [Xylella fastidiosa M23] gi|28056335|gb|AAO28228.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182631012|gb|ACB91788.1| putative aminomethyl transferase [Xylella fastidiosa M23] Length = 305 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 108/278 (38%), Gaps = 18/278 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L + +++ G + F A ++D L SA LTP+G++ F + + Sbjct: 30 TLFPLPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPA 89 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117 E+ +L + + + +L Y R V I ++ +++ T + ++ +D Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGI 149 Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 ++ + L R ++ + + + G+ + P Sbjct: 150 TELDVSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVA 267 Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVHGVR 263 V ALA+ ID +V + + R Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAGLAR 305 >gi|221135433|ref|ZP_03561736.1| glycine cleavage T protein (aminomethyl transferase) [Glaciecola sp. HTCC2999] Length = 296 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L + IK+ G + ++Q +T ++ TL + A +GK+ +F S +D Sbjct: 10 AHLPHLGIIKITGTDKVKYIQGQVTCNIETLNSERWTFGAHCDFKGKMWSFFQASFW-DD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER--F 120 +L + S + +L Y + S V I + S + + + DE+ Sbjct: 69 ALLLICPKDVIPSALSELKKYGVFSQVEIVDASNEFSFTGSGSDAGEYGQVTCTDEQLVL 128 Query: 121 SIADVLLHRTW------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 S+++ + R N + + L I GI T + P + Sbjct: 129 SMSNQTITRALHVSRDSSANSDLPDGSAVWQALDIQSGIG-AITSSTSNEYVPQILNLQA 187 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 L+ I KGCY+GQEVV+R ++ ++ I+ Sbjct: 188 LDAIDFKKGCYMGQEVVARTKYLGKNKRAGYILK 221 >gi|315179108|gb|ADT86022.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218] Length = 326 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 21/246 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L + I + G +LQ +T +V+TL + A +GK+ F + Sbjct: 26 LTHLDSWGAITMVGADKKNYLQGQVTCNVVTLTADQSIFGAHCDAKGKVWSVFRLFH-HR 84 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDE-- 118 D + + +S ++ + +L Y + S V I P GV+ + Q + S + Sbjct: 85 DGYAMFQPKSAIEAELRELKKYAIFSKVEIAESPDIALGVIGTQAQAYIDRLSDAQGDVR 144 Query: 119 --------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPS 163 R S LL E++A+ D + I I + Sbjct: 145 AIDGGTAVRISEQRWLLLVNEQTAEQLATNTDATRVDAALWTRFDIEDAIP-VIERADQN 203 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S Sbjct: 204 EHIPQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDSDAHEM 263 Query: 224 DIEIGT 229 + +G Sbjct: 264 ERSVGE 269 >gi|194365311|ref|YP_002027921.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3] gi|194348115|gb|ACF51238.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3] Length = 291 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 17/268 (6%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + + G A F A + DV LP + SA L+ +G+ L F + ++ ED Sbjct: 14 RLPGHQLLSLQGPDAAVFAHAQFSGDVTALPLLHWQWSAWLSAKGRTLTVFQLLRLAEDH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117 +L + D++ +L + R V + ++ V ++ S ++ Sbjct: 74 VMLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAQTTGDGWE 133 Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 R G A+ + + + HG+ + P Sbjct: 134 LDLGSDALPRTLRIGATEAFAAGSEADEATFALAWRQADLRHGLPRL-EESQREVWTPQQ 192 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 +D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAAPAQAGDGVQQDGTALGT 251 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257 + V G ALA+ ++ D ++ G A+ Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGDAV 279 >gi|255075321|ref|XP_002501335.1| predicted protein [Micromonas sp. RCC299] gi|226516599|gb|ACO62593.1| predicted protein [Micromonas sp. RCC299] Length = 370 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 117/358 (32%), Gaps = 90/358 (25%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKI 60 V L+++ +++ G+ AIPFLQ I+T DV +L A +A+ QG++ + + Sbjct: 5 GVSLASRRVLRIAGEEAIPFLQRILTNDVRSLADAGAAPVYAALQNAQGRVRHDLFLHRE 64 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + ++ +D L+ KLRS V ++ V+ E + Sbjct: 65 FGGALLADLPADGFKDALDALVKLKLRSPVTLDDAGEELRVVVAGGERSDRRDPTADGSA 124 Query: 116 --------------------IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELR 148 D R+ + Y + R Sbjct: 125 EWVPPVDAESADDDILSFLQPDPRWHGLGLRGVIPAAAAAELLPAGADPEEAEAAYAQWR 184 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-- 206 G+ + + + + P + + LN IS KGCYIGQE+ +R H ++RKR + Sbjct: 185 YTLGVAEGSEEL--GGLLPLECNLAGLNAISFDKGCYIGQELTARTHHTGVVRKRIVPAL 242 Query: 207 --------------ITGTDDLPP--------------------------SGSPILTD--- 223 + G P G + D Sbjct: 243 FARRSQWIAKDSAGVGGRASTPQEKWSGHEVPTRNGDANTNEQQKPRARPGMDVFLDGAP 302 Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKG-MALTVHG------VRVKASFPHWY 272 +G + G L + RI+ + A +AL HG V + + P W+ Sbjct: 303 TTGKPVGKVIAARGDVGLILLRIEHLAKADSAEDLALVAHGNDERCHVDARVNIPDWW 360 >gi|212710031|ref|ZP_03318159.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM 30120] gi|212687238|gb|EEB46766.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM 30120] Length = 328 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 30/241 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L N I + G A +LQ +TAD+ TL + +A P+GK+ + + Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADISTLEHAH-TLTAHCDPKGKMWSDLRLFHHLD 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------------- 101 +E RS D+ + +L Y + S V E +P ++ Sbjct: 81 GFSYIE-RRSVADAQLAELKKYAVFSKVTFEKKPELKLLGIAGQGAREALAAIFATLPDH 139 Query: 102 ---LSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + T + ERF I + + + + + L I G+ Sbjct: 140 QNQVVVDGNSTLLHFDLPAERFLIITDEPIAQKITDTLNAPQVSDQQWLALDIEAGLAVI 199 Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + + P A + ++ +GIS KGCY GQE+V+R + R ++ +TGT P Sbjct: 200 DQENSAQH-LPQAANLQVIPHGISFKKGCYTGQEMVARAKFRGANKRAMYWLTGTGSALP 258 Query: 216 S 216 + Sbjct: 259 T 259 >gi|322831502|ref|YP_004211529.1| folate-binding protein YgfZ [Rahnella sp. Y9602] gi|321166703|gb|ADW72402.1| folate-binding protein YgfZ [Rahnella sp. Y9602] Length = 330 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 97/268 (36%), Gaps = 37/268 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TADV L A +GK+ + K Sbjct: 20 LTLISLEDWALVTMTGADTVKYLQGQVTADVDALAADQHILCAHCDAKGKMWSNLRLFKR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101 + +E R+ RD+ + ++ Y + S V + GV Sbjct: 80 GDGMAFIE-RRNLRDTQLTEIKKYAVFSKVTFTADDDVVLLGVAGFQASAALTGLFSTLP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + E T + S ER+ + G + +D + + L I Sbjct: 139 TAEQQVVQQDETTLLHFSLPAERYLIVTSPEKARQVVEELGE-QAQRNDSQQWLALDIEA 197 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G +T P + L+GIS TKGCY GQE+V+R ++R ++ + G Sbjct: 198 GFPVIDTANAVQ-FIPQATNIHALDGISFTKGCYAGQEMVARAKYRGANKRALYWLAGKA 256 Query: 212 ---DLPPSGSPILTDD--IEIGTLGVVV 234 P + + GT+ V Sbjct: 257 SKVPAPADDLELQLGENWRRTGTVLAAV 284 >gi|15803434|ref|NP_289467.1| putative global regulator [Escherichia coli O157:H7 EDL933] gi|15833024|ref|NP_311797.1| global regulator [Escherichia coli O157:H7 str. Sakai] gi|168747622|ref|ZP_02772644.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113] gi|168753837|ref|ZP_02778844.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401] gi|168760027|ref|ZP_02785034.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501] gi|168766892|ref|ZP_02791899.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486] gi|168775776|ref|ZP_02800783.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196] gi|168778912|ref|ZP_02803919.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076] gi|168785745|ref|ZP_02810752.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869] gi|168800032|ref|ZP_02825039.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508] gi|195936517|ref|ZP_03081899.1| putative global regulator [Escherichia coli O157:H7 str. EC4024] gi|208807633|ref|ZP_03249970.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206] gi|208812486|ref|ZP_03253815.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045] gi|208818514|ref|ZP_03258834.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042] gi|209400648|ref|YP_002272373.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115] gi|217326988|ref|ZP_03443071.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588] gi|254794848|ref|YP_003079685.1| putative global regulator [Escherichia coli O157:H7 str. TW14359] gi|261226211|ref|ZP_05940492.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256534|ref|ZP_05949067.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. FRIK966] gi|81765981|sp|Q8XD41|YGFZ_ECO57 RecName: Full=tRNA-modifying protein ygfZ gi|226730793|sp|B5YQ91|YGFZ_ECO5E RecName: Full=tRNA-modifying protein ygfZ gi|12517426|gb|AAG58026.1|AE005520_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13363242|dbj|BAB37193.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187768764|gb|EDU32608.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196] gi|188017872|gb|EDU55994.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113] gi|189003387|gb|EDU72373.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076] gi|189358685|gb|EDU77104.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401] gi|189363755|gb|EDU82174.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486] gi|189369226|gb|EDU87642.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501] gi|189373870|gb|EDU92286.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869] gi|189377696|gb|EDU96112.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508] gi|208727434|gb|EDZ77035.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206] gi|208733763|gb|EDZ82450.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045] gi|208738637|gb|EDZ86319.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042] gi|209162048|gb|ACI39481.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115] gi|209760538|gb|ACI78581.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760540|gb|ACI78582.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760542|gb|ACI78583.1| hypothetical protein ECs3770 [Escherichia coli] gi|209760546|gb|ACI78585.1| hypothetical protein ECs3770 [Escherichia coli] gi|217319355|gb|EEC27780.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588] gi|254594248|gb|ACT73609.1| predicted folate-dependent regulatory protein [Escherichia coli O157:H7 str. TW14359] gi|320189243|gb|EFW63902.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. EC1212] gi|320640542|gb|EFX10081.1| putative global regulator [Escherichia coli O157:H7 str. G5101] gi|320645789|gb|EFX14774.1| putative global regulator [Escherichia coli O157:H- str. 493-89] gi|320651089|gb|EFX19529.1| putative global regulator [Escherichia coli O157:H- str. H 2687] gi|320667179|gb|EFX34142.1| putative global regulator [Escherichia coli O157:H7 str. LSU-61] gi|326339017|gb|EGD62832.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. 1044] gi|326343101|gb|EGD66869.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli O157:H7 str. 1125] Length = 326 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYLQGQVTADVSQMTDDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLAELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|300691470|ref|YP_003752465.1| aminomethyl transferase [Ralstonia solanacearum PSI07] gi|299078530|emb|CBJ51185.1| putative aminomethyl transferase [Ralstonia solanacearum PSI07] Length = 346 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 105/314 (33%), Gaps = 53/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL + +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101 L+ D+ +L +L + LR+ + + Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKARLRPMDEFIAVTVAGPGAADALREAGAVLPESDAAY 152 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 Q T R A W + + + L Sbjct: 153 AVAQQSATVGQQVGAVIRLPDAGDRPRYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPSITLS-TQDHFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + ++ G+VV G L ++D +D A G Sbjct: 272 VNAPT-SAGAEVFSEADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSVIHLATADGPV 330 Query: 257 LTVHGVRVKASFPH 270 LT+ + Sbjct: 331 LTLQSLPYAIPVAE 344 >gi|294011519|ref|YP_003544979.1| aminomethyltransferase [Sphingobium japonicum UT26S] gi|292674849|dbj|BAI96367.1| aminomethyltransferase [Sphingobium japonicum UT26S] Length = 245 Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 10/207 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++ Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKEGEPRWTALLTPQGKALFDFILWAD 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 D +++ + ++ D+L +L Y+LR V I V + + D R Sbjct: 61 GGD-VLIDCEGAQADALARRLALYRLRRKVAITRADELAVHWALE-----APGKPFDPRL 114 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L HR W + R++ GI + + I +A L G+ Sbjct: 115 P---QLGHR-WIAPADEGDASAAFRAHRLSLGIFEGVGELGQDQILWLEANAGELGGVDY 170 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207 KGCY+GQE +R+ +RN + +R + + Sbjct: 171 DKGCYVGQENTARMHYRNKVNRRLVAV 197 >gi|238026999|ref|YP_002911230.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia glumae BGR1] gi|237876193|gb|ACR28526.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia glumae BGR1] Length = 376 Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 91/260 (35%), Gaps = 40/260 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L I+V G A FL + +T D+ L + + +P+G++L FL + Sbjct: 32 AYMPLPQLGLIEVAGDDAATFLHSQLTNDIEQLDAAGVKLAGYCSPKGRLLASFLAWRTA 91 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 + +L + + ++ +L + LR+ + V L + + S D Sbjct: 92 DGVQLL-LSAELQPAVQKRLSMFVLRAKAKLSDAGAEWVALGLAGDVREALSGRFDALPD 150 Query: 119 --------------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRI 149 R A W +++ + + E+R Sbjct: 151 GVHTKLDGPAGTLIRLPDAAGRPRYLWIARRAHAEAHAAELDAKLARVSPAVWNWLEIRA 210 Query: 150 NHG-IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206 I P + P D++ I+ KGCY GQE+V+R Q+R I++R Sbjct: 211 AEPRITQPVVE----QFVPQMVNYDVIGAINFRKGCYPGQEIVARSQYRGTIKRRTALAH 266 Query: 207 ITGTDDLPPSGSPILTDDIE 226 + G +G + Sbjct: 267 VAGDTAEVRAGVELFHSRRS 286 >gi|253988688|ref|YP_003040044.1| global regulator [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637988|emb|CAR66616.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780138|emb|CAQ83299.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 331 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 34/250 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G +LQ +TAD+ L SA +GK+ + Sbjct: 20 LTLISLDDWGLVTATGPDTKKYLQGQVTADIFALAANQHVLSAHCDAKGKMWSNLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 E+ +E RS ++ +L Y + S + + +Q N V+L Sbjct: 80 GENLAYIE-RRSVLETQFTELKKYAVFSKITL-VQDENAVLLGVAGKGCREALNNIFPTL 137 Query: 106 ----------QEHTFSNSSFIDERF-SIADVLLHRTWGHN-EKIASDIKTYHELRINHGI 153 + T + + ERF I D + ++ + + L I G Sbjct: 138 PDANNAVVEHETTTLLHFTLPSERFMLITDTATAELLTETLQAQLNNSEQWLALDIAAGF 197 Query: 154 VDPNTDFLPSTIF-PHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D ST F P + L GI KGCY GQE+V+R ++R ++ + G+ Sbjct: 198 P--VIDPANSTQFIPQATNLQALEGGICFKKGCYTGQEMVARAKYRGANKRAMYWLAGSA 255 Query: 212 D-LPPSGSPI 220 +P +G + Sbjct: 256 AKIPVAGDDL 265 >gi|17546501|ref|NP_519903.1| hypothetical protein RSc1782 [Ralstonia solanacearum GMI1000] gi|17428799|emb|CAD15484.1| putative glycine cleavage t protein (aminomethyl transferase) [Ralstonia solanacearum GMI1000] Length = 346 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 103/314 (32%), Gaps = 53/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +N + I V G A FL +T V L AR + +P+G++L L+ + + DT + Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLLWR-QADTIV 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101 L+ D+ ++ +L + LR+ + + Sbjct: 93 LQTDKLVAPAITKRLSMFVLRAKAKLRPMDEFIAITVAGPDAADALRAAGAVLPESDAPY 152 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 Q T R A W + + + L Sbjct: 153 AVAQQSATVGQQVGAVVRLPDAGNRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256 +G+ + + G+VV G L ++D +D A G Sbjct: 272 VDAPT-SAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATADGPV 330 Query: 257 LTVHGVRVKASFPH 270 LT+ + Sbjct: 331 LTLQRLPYAIPVAE 344 >gi|146162532|ref|XP_001009664.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila] gi|146146307|gb|EAR89419.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila SB210] Length = 381 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 121/335 (36%), Gaps = 74/335 (22%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLISKIE- 61 L N+ I + GK A LQ I T D+ + A + L PQG+I+ LI + + Sbjct: 30 LQNRKIISLSGKDAKSILQGIQTNDMNLFSQQSNKAALYTQFLNPQGRIIFDALIIRPQV 89 Query: 62 ---------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------- 96 ED + ++++ + I + Y LR V + Sbjct: 90 VIQGELKTKEDEYWIDLESKQGADFIKHIKKYCLRKRVSLADFTNKVNVVTVYSDLIMQQ 149 Query: 97 ----------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--- 143 ++ + Q+ ++ + D R S + ++ I+ Sbjct: 150 KEQEGDYWNHLDASIYEKTQDEIYTQVCYTDPRCSNLGMRCIVPSQDQLQLDKTIEEKSQ 209 Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 Y R+ GI + + P +D LNG+S TKGCY+GQE+ +R H I+R Sbjct: 210 DIYDAQRLVLGIAQGSE---VADRLPFTVNLDFLNGVSFTKGCYVGQELTARTYHTGIVR 266 Query: 202 KRPMIITGTDD---------LPPSGSPILT---------------DDIEIGTLGVVVGKK 237 +R + D+ + PSG + + E+G + G Sbjct: 267 RRVVPFVLGDNQKHQLQNNVINPSGVNMYDPNFNESLEGESMLDKNSNEVGKILYNKGNV 326 Query: 238 ALAIAR-IDKVDHAIKKGMALTVHGVRVKASFPHW 271 +A+ + +++ + ++ ++ + + W Sbjct: 327 GIALVKYLER--GSNTDDLSFQAKNIKGQLIYSSW 359 >gi|71899417|ref|ZP_00681576.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|71730826|gb|EAO32898.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] Length = 305 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 108/278 (38%), Gaps = 18/278 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L + +++ G + F A ++D L SA LTP+G++ F + + Sbjct: 30 TLFQLPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPA 89 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117 E+ +L + + + +L Y R V I ++ +++ T + ++ +D Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGI 149 Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 ++ + L R ++ + + + G+ + P Sbjct: 150 TELDVSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVRSAEGDIGQVA 267 Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVHGVR 263 V ALA+ ID +V + + R Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAGLAR 305 >gi|331684524|ref|ZP_08385116.1| tRNA-modifying protein YgfZ [Escherichia coli H299] gi|331078139|gb|EGI49345.1| tRNA-modifying protein YgfZ [Escherichia coli H299] Length = 326 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLITLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|161506404|ref|YP_001573516.1| putative global regulator [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189041184|sp|A9MRH6|YGFZ_SALAR RecName: Full=tRNA-modifying protein ygfZ gi|160867751|gb|ABX24374.1| hypothetical protein SARI_04602 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 326 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALATITGVDSEKYIQGQVTADVSQMTEQQHLLTAHCDAKGKMWSNLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS R++ + +L Y + S V+I ++ Sbjct: 79 REGFVWIE-RRSVREAQLTELKKYAVFSKVVIAPDDDRVLLGVAGFQARAALANVFSDLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + T ERF +A V + H E ++ + + L I G Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATVNMLTEKLHGEAELNNSQQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 198 IPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKAS 256 Query: 213 -LPPSGSPI 220 +P +G + Sbjct: 257 RVPEAGEDL 265 >gi|78485072|ref|YP_390997.1| glycine cleavage T protein (aminomethyl transferase) [Thiomicrospira crunogena XCL-2] gi|78363358|gb|ABB41323.1| glycine cleavage system T protein homolog [Thiomicrospira crunogena XCL-2] Length = 354 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 50/291 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L++Q+ IKV G+ A FLQ +T D+ + + A+ SA PQGK+L + K + D Sbjct: 42 TSLAHQALIKVTGEEAFDFLQGQLTNDLKDVSEQQAQLSAYCEPQGKVLAIMTVFKHQ-D 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112 L D S + +++ +L +K+RS V +E + + + + + Sbjct: 101 ALYLSFDGSLKQTILQRLTMFKMRSKVELEDVSEQMIQVGYAGDFADLDVQRLLSTKIKN 160 Query: 113 ----SSFIDERFSIADVLLHRTWG---------------------HNEKIASDIKTYHEL 147 DE +++D++ + G N ++ + ++ + Sbjct: 161 IYEVEQVQDE--ALSDIIAIKLPGPYHCYSFFGPVEQAKSLWDTLKNNGEFTNTQDWNLI 218 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I G D + +D LN I+ KGC+ GQEV++R+ +R KR M + Sbjct: 219 HIVSGQPQ-VNDTTSNEFIAQFLNLDKLNAINFKKGCFPGQEVIARMFYRGKATKRMMRL 277 Query: 208 TGTDDLP-PSGS--PILTDDIEIGTLGVVV-------GKKALAIARIDKVD 248 + LP G ++ + + V G LA+ + ++ Sbjct: 278 HLEEVLPLEPGETFKLMDEAEKKYKFTTVSSAPDIYEGTVCLAVTTLKPLE 328 >gi|212637154|ref|YP_002313679.1| glycine cleavage T protein [Shewanella piezotolerans WP3] gi|212558638|gb|ACJ31092.1| Glycine cleavage T protein (aminomethyl transferase) [Shewanella piezotolerans WP3] Length = 340 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 104/285 (36%), Gaps = 28/285 (9%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +LS+ + V G+ F+ +T D+ +L + R A P+GK+L F + Sbjct: 40 HLSHLGLMSVTGEQGRSFIHGQVTTDISSLEAEQWRWGAHCDPKGKMLATFRTFAKGDTL 99 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----------NS 113 F+L + + + +L Y + S + ++L E S Sbjct: 100 FML-MPKQTLALDLPQLQKYAVFSKAELTDVSEQWLILGVAGEQAASWLTAKFGELNAEL 158 Query: 114 SFIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPS 163 + ID I D K+ + D + L G + + Sbjct: 159 TLIDNGMVIQDNDRFIVVIEQSKVDTANLLADVSLFDATAWQALETLAGYPNIGAAH-SA 217 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS KGCY+GQE ++R+++R ++ I++GT + +L Sbjct: 218 QFVPQMCNLQAIDGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSAVLTDESVLEI 277 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + G G ++ R +V A+ + + AS Sbjct: 278 ALGEGAGFRRAGTIIESVQREQQVLF-----TAVLANDTPLDASL 317 >gi|157377080|ref|YP_001475680.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sediminis HAW-EB3] gi|157319454|gb|ABV38552.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella sediminis HAW-EB3] Length = 321 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 86/228 (37%), Gaps = 23/228 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + + G+ F+ +T D+ +L A P+GK+ F I EDT Sbjct: 24 LTHLGLMSITGEQGRSFIHGQVTTDISSLEKDQWCWGAHCDPKGKMWASFRTFAI-EDTL 82 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFSIA 123 + + + + +L Y + S + + ++L E N+ F D ++ Sbjct: 83 FMMMPSDTLEVDLPQLAKYAVFSKAELTNVSSDWLILGVAGEQAQEWVNNYFGDIDKAVT 142 Query: 124 DVLLHRTWGH------------NEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164 ++ ++ + + I + L I G + Sbjct: 143 EIPGGALLKDGSRFIIVIEKTPSQALLTSINAPIYECKVWQALEIQSGYPNLAAAH-QGH 201 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P + + GIS KGCY+GQE V+R+++R ++ I++G Sbjct: 202 FVPQMCNLQAIGGISFEKGCYMGQETVARMKYRGGNKRALYILSGNAS 249 >gi|311106017|ref|YP_003978870.1| glycine cleavage T-protein family protein [Achromobacter xylosoxidans A8] gi|310760706|gb|ADP16155.1| glycine cleavage T-protein family protein [Achromobacter xylosoxidans A8] Length = 333 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 103/294 (35%), Gaps = 43/294 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---- 59 L + G A+ FL +T DV LP AR + T +G++L ++ + Sbjct: 19 APLDDFLIFAATGADALTFLHGQLTQDVTGLPQDAARLAGYCTAKGRLLATLVMWRGAPG 78 Query: 60 --IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSF 115 + + + +L+ +L + LR+ + P + GV S + ++ Sbjct: 79 GADDAPQLYGLVRQDLSQALLKRLSMFVLRAKAKLAATPLHVAGVTASAAEAAALEAAAG 138 Query: 116 IDER---------------FSIADVLLHRTWGHNEKIAS------------DIKTYHELR 148 R AD L W +++ + +H Sbjct: 139 ALPRAPWQRVDLPSGTWIAAPSADARLRWWWIASDEQLAQSAALAGALGLAPAAQWHTAD 198 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + GI T P +DL+ G+S TKGCY GQEVV+R +R +++R T Sbjct: 199 LAAGIP-WITAATQDIFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRGTVKRRMAYGT 257 Query: 209 GTDDLPP----SGSPI---LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 D +G + IG + G+ L + A+ +G Sbjct: 258 IADTAVQDQALAGVDVYDATQPGEPIGRVVDAAGEHGLVSVLFETTLAALPEGD 311 >gi|90416426|ref|ZP_01224357.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium HTCC2207] gi|90331625|gb|EAS46853.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium HTCC2207] Length = 253 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 40/228 (17%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +I++ G + FLQ +T D+ +L + A TP+G+++ F E+ + ILE Sbjct: 18 RGYIRLSGPDSGKFLQGQVTCDMDSLSPSNSIDGAHCTPKGRMVFLFTAHCDEDGSIILE 77 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 S DS + L Y + I + Sbjct: 78 AHPSIIDSALANLKKYGVFFKTEITD--------------------------------IS 105 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 ++ +N+ SD++ R+ G + + L P +D L I+ KGCY GQ Sbjct: 106 DSYSNNQTHLSDLE-----RLRAGKAEVVAETL-EMFIPQMLNLDALGYINFKKGCYTGQ 159 Query: 189 EVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD-DIEIGTLGVVV 234 E+++R +R +++R + T+ LP G I + IG + V Sbjct: 160 EIIARAHYRGAVKRRMHHLALTTESLPSPGDEIKDNQGKSIGNIASAV 207 >gi|218706404|ref|YP_002413923.1| putative global regulator [Escherichia coli UMN026] gi|293406397|ref|ZP_06650323.1| global regulator [Escherichia coli FVEC1412] gi|298382133|ref|ZP_06991730.1| ygfZ [Escherichia coli FVEC1302] gi|300896205|ref|ZP_07114754.1| folate-binding protein YgfZ [Escherichia coli MS 198-1] gi|226730797|sp|B7N7E2|YGFZ_ECOLU RecName: Full=tRNA-modifying protein ygfZ gi|218433501|emb|CAR14404.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli UMN026] gi|291426403|gb|EFE99435.1| global regulator [Escherichia coli FVEC1412] gi|298277273|gb|EFI18789.1| ygfZ [Escherichia coli FVEC1302] gi|300359939|gb|EFJ75809.1| folate-binding protein YgfZ [Escherichia coli MS 198-1] Length = 326 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLITLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|299747549|ref|XP_001837112.2| mitochondrial protein [Coprinopsis cinerea okayama7#130] gi|298407569|gb|EAU84729.2| mitochondrial protein [Coprinopsis cinerea okayama7#130] Length = 388 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 127/364 (34%), Gaps = 101/364 (27%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + ++N++ I V G A FL I++ V K + SA L QG++L I Sbjct: 15 TLAPITNRALISVSGSDANTFLNGILSTHV-----KPPQFSAFLHAQGRVLYDVFIYTDP 69 Query: 62 ------EDTFILEI---DRSKRD--SLIDKLLFYKLRSNVII-EIQPINGVVLSWN---- 105 ++++E S D L+ L + LRS V + + + +W Sbjct: 70 NPQSTKGPSYLIEYSPPPASNTDVPPLLTYLKRHVLRSKVKVRDASGNYDIWAAWGSELD 129 Query: 106 ------QEHTFSNSSFIDERFSI--------ADVLLHRTWG------------HNEKIAS 139 +E T+++S ++ + +VL R G E + Sbjct: 130 RKWEQKREWTWASSGAVEPVWGREAPWGSEPGEVLDCRGIGMGRRLLVKQGDKPKEATSH 189 Query: 140 DIK---TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG------------------I 178 DI Y RI HG+ + N D P FP D+ +D++ G + Sbjct: 190 DIATSDDYLLHRILHGVPEGNVDIPPMHAFPMDSNLDMMGGGTLLQGPDAEVSELIPTSV 249 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------------DLPP---------- 215 KGCY+GQE+ R H+ +IRKR + +D LPP Sbjct: 250 DFRKGCYVGQELTVRTYHKGVIRKRIHPVILSDLGSSSTTPATLSTPLPPDLDIKPVQQK 309 Query: 216 --SGSPILTDDIEIGT---LGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKAS 267 + GT L LA+ R++ V + L + G + + Sbjct: 310 DNAAEGATRTPRPRGTGKLLSTTTHGVGLALLRLEHVAAQQAGNIRLDLSHEGGASLSIT 369 Query: 268 FPHW 271 W Sbjct: 370 --PW 371 >gi|291284217|ref|YP_003501035.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615] gi|209760544|gb|ACI78584.1| hypothetical protein ECs3770 [Escherichia coli] gi|290764090|gb|ADD58051.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615] gi|320656585|gb|EFX24481.1| putative global regulator [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662104|gb|EFX29505.1| putative global regulator [Escherichia coli O55:H7 str. USDA 5905] Length = 326 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYLQGQVTADVSQMTDDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLAELKKYAVFSKVTIVPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|238899111|ref|YP_002924793.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259710251|sp|C4K7V2|YGFZ_HAMD5 RecName: Full=tRNA-modifying protein ygfZ gi|229466871|gb|ACQ68645.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 336 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 36/251 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L++ I+V GK + +LQ IT DV L A P+GKIL + Sbjct: 21 TVILLNDWGLIRVTGKDRVKYLQGQITLDVPLLKENQHILGAHCDPKGKILSTVRLFHYL 80 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PI 97 + + D L++ L Y + S V I+I P Sbjct: 81 KGLAFITRKSLLHDELME-LRKYAVFSKVEIDIAESTVLLGIAGDQARKVLKNCFEKLPT 139 Query: 98 NGVVLSWNQEHTFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + +++ + S ER F D L+ + ++ + + + L I Sbjct: 140 ETEPVVHEDDYSLLHFSSPRERFLLVSQAFKEGDFLIQKL--QDQAVFRSSEQWLALDIE 197 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P A + L GIS TKGCY GQEVV+R ++R + +K +TG Sbjct: 198 SGFPIIDAKNKTQ-FIPQAANLKALGGISFTKGCYTGQEVVARTEYRGVNKKALYWLTGK 256 Query: 211 D-DLPPSGSPI 220 +P G + Sbjct: 257 ACRVPDVGEAL 267 >gi|238909848|ref|ZP_04653685.1| putative global regulator [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 326 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 HDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|170058333|ref|XP_001864877.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877457|gb|EDS40840.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 349 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 94/222 (42%), Gaps = 25/222 (11%) Query: 31 VLTLPYK-IARGSAILTPQGKILLYFLISKIEE---DTFILEIDRSKRDSLIDKLLFYKL 86 + + + + +L G++L +I ++ D F++E D D+L L +++ Sbjct: 1 MNHFQHGASSIYAMLLNTAGRVLFDTMIYRMSPEQSDHFLVECDAGLVDALRKHLTMFRI 60 Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSS-------FIDERFSIADVLL----------HR 129 R V I + + + + + + D R + + + Sbjct: 61 RKKVEIAPAECSVWAVFSQENGSLPEQASREGVSIYKDTRLAELGYRIITDKTVSLDTVK 120 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 + ++ +Y E R + GI + +F FP ++ D ++G+S KGCYIGQE Sbjct: 121 AAFPHGTAYAEGGSYLEHRFSLGIGEGVNNFPQGKCFPLESNCDYMHGVSFHKGCYIGQE 180 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLP----PSGSPILTDDIEI 227 + +R H ++RKR M +T + +P P + I + D ++ Sbjct: 181 LTARTHHTGVVRKRLMPLTFENPVPNNELPDDAEIKSVDGQV 222 >gi|260771285|ref|ZP_05880212.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972] gi|260613882|gb|EEX39074.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972] Length = 323 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 21/246 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L + I + G +LQ +T +V+TL + + A +GK+ F + Sbjct: 23 LTHLDSWGAITMVGADKKNYLQGQVTCNVVTLTAEQSIFGAHCDAKGKVWSVFRLFH-HR 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDE-- 118 D + + +S ++ + +L Y + S V I P GV+ + Q + S + Sbjct: 82 DGYAMFQPKSAIEAELRELKKYAIFSKVEIAESPDIALGVIGTQAQAYIDRLSDAQGDVR 141 Query: 119 --------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPS 163 R S LL E++ + D + I I + Sbjct: 142 AIDGGTAVRISEQRWLLLVNEQTAEQLTTSTDATRVDAALWTRFDIEDAIP-VIERADQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S Sbjct: 201 EHIPQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDSDAHEM 260 Query: 224 DIEIGT 229 + +G Sbjct: 261 ERSVGE 266 >gi|241762172|ref|ZP_04760255.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373422|gb|EER63022.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 274 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 29/278 (10%) Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55 ++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDF 71 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ E + +++ + + D+LI +L Y+LR + IEI P V S + SSF Sbjct: 72 ILW-AEGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLKPPENQAISSF 130 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 D R S + ++ A I + + R+ G+ + + +A L Sbjct: 131 SDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 NG+S TKGCY+GQE +R+ R I +R +I L I D+++ Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDDKCRIYYSDLKL-------- 240 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 A+ + R+ + +T P W K Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266 >gi|238896438|ref|YP_002921176.1| putative global regulator [Klebsiella pneumoniae NTUH-K2044] gi|238548758|dbj|BAH65109.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 327 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 92/249 (36%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ ITADV L +A +GK+ + + Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS RD+ + +L Y + S V I ++ Sbjct: 79 EGGFAWIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152 + + ERF + + E ++ + + L I G Sbjct: 138 DAATPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ P + L GIS KGCY GQE+V+R + R ++ ++GT Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256 Query: 213 -LPPSGSPI 220 +P SG + Sbjct: 257 RVPESGEDL 265 >gi|327395068|dbj|BAK12490.1| protein YgfZ [Pantoea ananatis AJ13355] Length = 337 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 33/274 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + V G + +LQ +T DV L +A +GK+ + Sbjct: 28 LTLMSLDAWALVAVVGPDSTSYLQGQLTLDVAALDASHHLPAAHCDAKGKMWSNLRLFHR 87 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101 E L + R RD+ + +L Y + S V + + GV Sbjct: 88 AEGYAYL-VRRELRDTQLPELKKYAVFSKVTLTADDDVTLLGVAGFQARAALANVFDTLP 146 Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + T + ERF S A + ++ +D + L I G Sbjct: 147 DSTTPVVQQGDTTLLWFAHPAERFLLVTSPAQADALKQTLADDAQFNDSTQWLALDIEAG 206 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I + + P A M L+ IS KGCY GQE+V+R ++R ++ ++G Sbjct: 207 IPVIDA-ATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQAS 265 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 P+ + L ++++G G LA ++D Sbjct: 266 HLPAANDSL--ELQMGERWRRTGTV-LAAVQLDD 296 >gi|183599845|ref|ZP_02961338.1| hypothetical protein PROSTU_03362 [Providencia stuartii ATCC 25827] gi|188022117|gb|EDU60157.1| hypothetical protein PROSTU_03362 [Providencia stuartii ATCC 25827] Length = 329 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 90/264 (34%), Gaps = 34/264 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L N I + G A +LQ +TADV + +A P+GK+ + + Sbjct: 22 LISLENWGLIHLHGLDAEKYLQGQVTADVSAMTPAQHTLTAHCDPKGKMWSDLRLFHHLD 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQPIN 98 +E S DS + +L Y + S V E P Sbjct: 82 GFSYIE-RASVLDSQLAELKKYAVFSKVTFEHKQELKLLGVAGKGAREALATIFTTLPDA 140 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 ++ + T + + +ERF I + + + + L I G Sbjct: 141 ENQVTVDGVSTILHYALPNERFLIVTDQATAQKITDSLNAEVVNDEQWLSLEIEAGYA-V 199 Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + P + L GIS KGCY GQE+V+R + R ++ + GT P Sbjct: 200 IEQASSAQHLPQATNLQALPYGISFKKGCYTGQEMVARAKFRGANKRAMYWLKGTATSVP 259 Query: 216 S---GSPILTDDI--EIGTLGVVV 234 + G D GT+ V Sbjct: 260 AVGEGVEWQLGDKWRRTGTVLAAV 283 >gi|148549504|ref|YP_001269606.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida F1] gi|148513562|gb|ABQ80422.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida F1] Length = 313 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 97/279 (34%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112 ++L + D+ + L Y + S + + T Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDTALQALGLVVPAAAG 126 Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + ++ AD R + + +I GI Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPAADAEPVRQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245 Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250 + I + +G + + G A LA+ + V+ Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGAGCELLAVLSAEAVEDG 284 >gi|152971844|ref|YP_001336953.1| putative global regulator [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956693|gb|ABR78723.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 329 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ ITADV L +A +GK+ + + Sbjct: 21 LTLMTLDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRR 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS RD+ + +L Y + S V I ++ Sbjct: 81 EGGFAWIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 139 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152 + + ERF + + E ++ + + L I G Sbjct: 140 DAATPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAG 199 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ P + L GIS KGCY GQE+V+R + R ++ ++GT Sbjct: 200 LPVIDS-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTAS 258 Query: 213 -LPPSGSPI 220 +P +G + Sbjct: 259 RVPEAGEDL 267 >gi|331664472|ref|ZP_08365378.1| tRNA-modifying protein YgfZ [Escherichia coli TA143] gi|331058403|gb|EGI30384.1| tRNA-modifying protein YgfZ [Escherichia coli TA143] Length = 326 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 107/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|156932650|ref|YP_001436566.1| putative global regulator [Cronobacter sakazakii ATCC BAA-894] gi|166979586|sp|A7MR73|YGFZ_ENTS8 RecName: Full=tRNA-modifying protein ygfZ gi|156530904|gb|ABU75730.1| hypothetical protein ESA_00433 [Cronobacter sakazakii ATCC BAA-894] Length = 329 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 101/276 (36%), Gaps = 37/276 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV L A +GK+ + + Sbjct: 19 LTLISLEDWALATITGPDSEKYLQGQVTADVTELGENQHLLVAHCDAKGKMWSNLRLFRH 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN--SSFI 116 + +E RS RD+ + ++ Y + S V I + V + +N ++ Sbjct: 79 GDGFAWIE-RRSVRDTQLAEMKKYAVFSKVTIAPNDDAVLLGVAGFQARAALANHFATLP 137 Query: 117 DERFSI----ADVLLHRTWG--------------------HNEKIASDIKTYHELRINHG 152 DE+ A LL H E + + L I G Sbjct: 138 DEQNPRVVDGATTLLWFGLPAERFMVITDAETASQLSDKLHGEAQLNASAQWLALDIEAG 197 Query: 153 IVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 198 FP--VIDAPNSNQFIPQATNIQALGGISFKKGCYAGQEMVARAKFRGANKRSLWYLAGHG 255 Query: 212 D-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +P G I ++++G G LA ++D Sbjct: 256 SRVPQPGEDI---EMQMGENWRRTGTV-LAAVQLDD 287 >gi|74313456|ref|YP_311875.1| putative global regulator [Shigella sonnei Ss046] gi|118577997|sp|Q3YXX2|YGFZ_SHISS RecName: Full=tRNA-modifying protein ygfZ gi|73856933|gb|AAZ89640.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323167896|gb|EFZ53586.1| tRNA-modifying protein ygfZ [Shigella sonnei 53G] Length = 326 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I + ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T + ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEYPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|194431674|ref|ZP_03063965.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012] gi|194420030|gb|EDX36108.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012] gi|320182198|gb|EFW57101.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella boydii ATCC 9905] gi|332086823|gb|EGI91959.1| tRNA-modifying protein ygfZ [Shigella boydii 5216-82] Length = 326 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFGHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|317049384|ref|YP_004117032.1| folate-binding protein YgfZ [Pantoea sp. At-9b] gi|316951001|gb|ADU70476.1| folate-binding protein YgfZ [Pantoea sp. At-9b] Length = 327 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 94/267 (35%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + V GK + +LQ +T DV L R +A +GK+ + Sbjct: 19 LTLMSLDEWALVAVQGKDSTSYLQGQLTLDVAALDAAQHRPAAHCDAKGKMWSSLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E L + R+ RD+ + +L Y + + V I ++ Sbjct: 79 GEGYGYL-VRRNLRDTQLTELKKYAVFAKVTIAADDDAVLLGVAGFQARTALAGLFPLLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN----EKIASDIKTYHELRINHG 152 + T + ERF + + + +D + L I G Sbjct: 138 DATTPVVQQDNTTLLWFAQPAERFLLVTTRDQAEALKDKLTGDAQFNDSMQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I ++ + + P + L+ IS KGCY GQE+V+R + R ++ + G Sbjct: 198 IPVIDS-ATSAQLIPQATNLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGQAS 256 Query: 213 LPPSGS---PILTDD--IEIGTLGVVV 234 P + D GT+ V Sbjct: 257 HLPQADGSLELQMGDRWRRTGTVLTAV 283 >gi|28899357|ref|NP_798962.1| hypothetical protein VP2583 [Vibrio parahaemolyticus RIMD 2210633] gi|260362198|ref|ZP_05775185.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030] gi|260878954|ref|ZP_05891309.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034] gi|260897479|ref|ZP_05905975.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466] gi|260899629|ref|ZP_05908024.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037] gi|81726929|sp|Q87LM8|YGFZ_VIBPA RecName: Full=tRNA-modifying protein ygfZ gi|28807593|dbj|BAC60846.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308088017|gb|EFO37712.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466] gi|308090453|gb|EFO40148.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034] gi|308108226|gb|EFO45766.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037] gi|308113962|gb|EFO51502.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030] Length = 322 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 98/272 (36%), Gaps = 34/272 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L + I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +++ +S + + ++ Y + S V IE N V+L + + S ++E Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137 Query: 121 S---------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + + +++ + + + I + + Sbjct: 138 GDVRIINGGTAVKVEANRWLLVVTEEAAQALIENSDATLTTRELWTRFDIESALP-FVSA 196 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L GIS TKGCY GQE V+R ++R ++ I+ G + Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256 Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242 I + +GTL +A+ + Sbjct: 257 IELERSVGDNWRSVGTLLTHYQFSDNQAMGLI 288 >gi|145300371|ref|YP_001143212.1| aminomethyltransferase related to GcvT [Aeromonas salmonicida subsp. salmonicida A449] gi|142853143|gb|ABO91464.1| predicted aminomethyltransferase related to GcvT [Aeromonas salmonicida subsp. salmonicida A449] Length = 303 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 14/227 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L++ + + G + +LQ +T DV L + +GK+ F + + Sbjct: 13 TLFSLTDLAITSLTGADRVKYLQGQVTCDVNALQPGQSTLGGHCDAKGKLWSDFRLLYLS 72 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSS 114 D ++ S + +L + + + V I V ++ S + Sbjct: 73 -DRLLMLTKPSVLARQLPELKKFAVFAKVEIAENHGQAVGVAGQGTDEWMEARFAVSQTG 131 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHD 169 ID+ ++ + + D+ + L I GI P Sbjct: 132 LIDDGMAVQIEADRWLLVSEQPLTIDLPAGSESLWWGLDIKAGIPHLEA-VHQGEYIPQM 190 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + L+GIS TKGCY+GQE V+R ++R + ++ GT P + Sbjct: 191 LNLQALDGISFTKGCYMGQETVARAKYRGANNRALFVLAGTASEPVA 237 >gi|146312956|ref|YP_001178030.1| putative global regulator [Enterobacter sp. 638] gi|166979585|sp|A4WE49|YGFZ_ENT38 RecName: Full=tRNA-modifying protein ygfZ gi|145319832|gb|ABP61979.1| conserved hypothetical protein [Enterobacter sp. 638] Length = 326 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 103/275 (37%), Gaps = 35/275 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV L A P+GK+ + + Sbjct: 19 LTLISLDDWALATISGADSEKYLQGQVTADVAQLGEHQHLLVAHCDPKGKMWSNLRLFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN------ 112 + D F RS RD+ + +L Y + S V I N + V + N Sbjct: 79 Q-DGFACIERRSLRDAQLTELKKYAVFSKVTIVADDENVLLGVAGFQARAALKNLFSELP 137 Query: 113 ----------------SSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 DERF +A E ++ + + L I G Sbjct: 138 DADKPLINDGVTSLLWFEHPDERFLLVTDVATADRVTEALRGEAQFNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 198 LPIIDA-VNSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGNAS 256 Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +P +G + ++++G G LA ++D Sbjct: 257 RVPEAGEDL---ELKMGENWRRTGTV-LAAVQLDD 287 >gi|153835742|ref|ZP_01988409.1| protein YgfZ [Vibrio harveyi HY01] gi|148867601|gb|EDL66905.1| protein YgfZ [Vibrio harveyi HY01] Length = 322 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 91/255 (35%), Gaps = 22/255 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L N I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSVSLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKGQSMLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 D + + +S + + ++ Y + S V IE + ++ F ++ D Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVAIEESSDVVLGVAGENADAFISTLNADSGD 139 Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161 + + LL T + + + + I + D Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLVEGSQATLTTHELWTRFDIEAALPYVAAD-A 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 + P + L GIS TKGCY GQE V+R ++R ++ I+ G G + Sbjct: 199 QNEHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AETLGEGAI 257 Query: 222 TDDIEIGTLGVVVGK 236 + +G VG Sbjct: 258 ELERSVGENWRSVGA 272 >gi|296104560|ref|YP_003614706.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059019|gb|ADF63757.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 326 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 30/247 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G A +LQ +TADV + +A P+GK+ + + Sbjct: 19 LTLISLDDWALATLVGADAEKYLQGQVTADVSQMTEHQHLLAAHCDPKGKMWSNLRLFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN------ 112 ++ +E RS RD + +L Y + S V I + + V + N Sbjct: 79 QDGFAFIE-RRSLRDDQLKELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFNELP 137 Query: 113 -----------SSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152 +S + LL E++ + + + L I G Sbjct: 138 DAEKQLVSEGETSILWFEHPAERFLLVTDAATAERVTEALRGEAQFNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 198 LPVIDA-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAS 256 Query: 213 LPPSGSP 219 P Sbjct: 257 RVPEAGE 263 >gi|62181559|ref|YP_217976.1| putative global regulator [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584838|ref|YP_002638636.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|75481001|sp|Q57K67|YGFZ_SALCH RecName: Full=tRNA-modifying protein ygfZ gi|254814151|sp|C0PY21|YGFZ_SALPC RecName: Full=tRNA-modifying protein ygfZ gi|62129192|gb|AAX66895.1| putative aminomethyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469365|gb|ACN47195.1| hypothetical protein SPC_3108 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716040|gb|EFZ07611.1| putative global regulator [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 326 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS ++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPAIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|198283240|ref|YP_002219561.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667779|ref|YP_002425823.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247761|gb|ACH83354.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519992|gb|ACK80578.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC 23270] Length = 321 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 112/309 (36%), Gaps = 47/309 (15%) Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 ++ V L + I G A FLQ + D+ L + S+ T +G+++ F + + Sbjct: 6 ITFVPLHTELGLIHASGVDAEKFLQGQFSNDLRALASGHGQWSSYSTAKGRMIANFYVQR 65 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GV 100 D F L + D++I++L +++ + + I+ G+ Sbjct: 66 DGSD-FWLSLADDMADTVIERLRKFRMMAKLEIKRGEPEFTLLAVHGNGAGELLGRALGI 124 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147 L + + I R A+ ++ + + + Sbjct: 125 ALGKSGNSGVVHDDAIITRLPWAEAEAFLIILPASRVEALSAKLGAAGARSGAAEDWRLW 184 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I G+ + I P + +++L GI+ KGCY GQE+V+R + ++ + + Sbjct: 185 AIQAGVGMISR-ATTEKIIPQELNLEVLGGINFKKGCYPGQEIVARSHYLGKLKNQTYRV 243 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTV 259 + L +G I + ++G+V+ G ALA+ R ++ G Sbjct: 244 AASAPL-QAGEEIFCTSMGAQSIGIVINAAQDPLGGFAALAVLRAANAGESLMAGAP--- 299 Query: 260 HGVRVKASF 268 G + Sbjct: 300 GGTPLSLGK 308 >gi|16761829|ref|NP_457446.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143316|ref|NP_806658.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168236108|ref|ZP_02661166.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737927|ref|YP_002115997.1| putative global regulator [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|213425828|ref|ZP_03358578.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582635|ref|ZP_03364461.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646969|ref|ZP_03377022.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289823826|ref|ZP_06543438.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81513026|sp|Q8Z3X4|YGFZ_SALTI RecName: Full=tRNA-modifying protein ygfZ gi|226730809|sp|B4TUR5|YGFZ_SALSV RecName: Full=tRNA-modifying protein ygfZ gi|25512796|pir||AF0872 conserved hypothetical protein STY3204 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504131|emb|CAD02878.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138950|gb|AAO70518.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194713429|gb|ACF92650.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290686|gb|EDY30040.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 326 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|261345600|ref|ZP_05973244.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541] gi|282566080|gb|EFB71615.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541] Length = 327 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 37/271 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L N I + G A +LQ +TAD+ TL + +A P+GK+ + Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADISTLSHAH-TLTAHCDPKGKMWSDLRLFHHLN 80 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------------- 101 +E RS D + +L Y + S V E +P ++ Sbjct: 81 GYSYIE-RRSVSDIQLAELKKYAVFSKVTFEKKPELKLLGVAGQGARQALEAVFNSLPDD 139 Query: 102 ---LSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + E T + + ERF + D + + I + L I G Sbjct: 140 QNQVVVDGETTILHFALPAERFLLITNDATALKISDTLKAIHVADSQWLALEIAAGFAVI 199 Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + + P A + L +GIS KGCY GQE+V+R + R ++ + GT P Sbjct: 200 DQE-NSGQHLPQAANLQALPHGISFQKGCYTGQEMVARAKFRGANKRAMYWLIGTGSTLP 258 Query: 216 SGSPILTDDIE--IGTLGVVVGKKALAIARI 244 ++ + +E +G G LA R+ Sbjct: 259 ----VIGEGVEWQLGENWRRTGTV-LAAVRL 284 >gi|254037943|ref|ZP_04872001.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43] gi|226839567|gb|EEH71588.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43] Length = 326 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|218701607|ref|YP_002409236.1| putative global regulator [Escherichia coli IAI39] gi|226730794|sp|B7NW39|YGFZ_ECO7I RecName: Full=tRNA-modifying protein ygfZ gi|218371593|emb|CAR19432.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli IAI39] Length = 326 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|329296870|ref|ZP_08254206.1| putative global regulator [Plautia stali symbiont] Length = 327 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 99/269 (36%), Gaps = 39/269 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + V GK + +LQ +T DV L R + +GK+ + Sbjct: 19 LTLMSLDEWALVSVQGKDSTSYLQGQLTLDVAALDAAQHRPAGHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E + + R+ R+ + +L Y + + V I ++ Sbjct: 79 GEGYAYV-VRRNLREQQVTELKKYAVFAKVTIAADDDAVLLGAAGFQARAALANVFATLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T + ERF + A+ L + G E +D + L I Sbjct: 138 DATTPVVQQDDTTLLWFAEPAERFLLVTTPAQAEALQQKLAG--EAQLNDSTQWLALDIA 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ ++ + + P + L+ IS KGCY GQE+V+R + R ++ + G+ Sbjct: 196 AGVPVIDS-ATTAQLIPQAINLQALDAISFKKGCYTGQEMVARAKFRGTNKRALYWLAGS 254 Query: 211 DDLPPSGS---PILTDDI--EIGTLGVVV 234 P + + D GT+ V Sbjct: 255 ASKVPDAASSLELQMGDKWRRTGTVLSGV 283 >gi|332289497|ref|YP_004420349.1| putative global regulator [Gallibacterium anatis UMN179] gi|330432393|gb|AEC17452.1| putative global regulator [Gallibacterium anatis UMN179] Length = 296 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 17/231 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L+N I++ G + FLQ +T DV+ + + +A P+GK++ F + K Sbjct: 11 AAKLNNYCVIEINGVDSQTFLQGQLTCDVVNMSANSSTLAAHCDPKGKVISLFRLIKFSA 70 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFS 121 + F D S + +L Y + S V + ++ S E N D E + Sbjct: 71 EQFWFVFDNSLLPLALQQLKKYAVFSKVTFVEKNLHIATFS---EDCLPNDLTTDAEVTT 127 Query: 122 IADVLLHRTWGHN----------EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 AD L R N + + + + L I +G T P Sbjct: 128 TADKTLVRVNAENDFYLLFSESEQAQSEQAEQWKWLNIVNGEP-LFTAVAQGEFIPQALN 186 Query: 172 MDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220 + L IS TKGCYIGQE ++R ++R + + + + GS + Sbjct: 187 LQHLEQAISFTKGCYIGQETIARAKYRGANKLAMFTLVADEIEAVEIGSSV 237 >gi|293416151|ref|ZP_06658791.1| global regulator [Escherichia coli B185] gi|284922846|emb|CBG35935.1| tRNA-modifying protein [Escherichia coli 042] gi|291432340|gb|EFF05322.1| global regulator [Escherichia coli B185] Length = 326 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|227112625|ref|ZP_03826281.1| putative global regulator [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 333 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TADV LP A +GK+ + Sbjct: 26 TLISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHILCAHCDAKGKMWSNLRLFHHG 85 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101 E +E R+ RD+ +++L Y + S I ++ Sbjct: 86 EGFAFIE-RRNLRDAQLNELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPD 144 Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + ++ T + + ERF L G + +D + + L I G Sbjct: 145 AEHPVVQHEGATLLHFAHPAERFLLVLSPEHGASLLEQLGDKVSL-NDSRQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211 ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G + Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262 Query: 212 DLPPSGSPI 220 +P +G + Sbjct: 263 KVPQAGDDL 271 >gi|260599238|ref|YP_003211809.1| putative global regulator [Cronobacter turicensis z3032] gi|260218415|emb|CBA33507.1| tRNA-modifying protein ygfZ [Cronobacter turicensis z3032] Length = 329 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 102/278 (36%), Gaps = 41/278 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ +TADV L A +GK+ + + Sbjct: 19 LTLISLEDWALATITGPDSEKYLQGQVTADVTELGENQHLLVAHCDAKGKMWSNLRLFRH 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104 ++ +E RS RD+ + ++ Y + S V I + GV Sbjct: 79 DDGFAWIE-RRSVRDTQLAEMKKYAVFSKVAIAPDDNAVLLGVAGFQARAALANHFTTLP 137 Query: 105 --------NQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A L + G + AS + L I Sbjct: 138 DEQNPRVVDGATTLLWFGLPAERFMVITDADTASQLTEQLRGEAQLNAS--AQWLALDIE 195 Query: 151 HGIVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G D + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGFP--VIDAPNSNQFIPQATNIQALGGISFKKGCYAGQEMVARAKFRGANKRALWYLAG 253 Query: 210 TDD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +P G I ++++G G LA ++D Sbjct: 254 HGSRVPQPGEDI---EMQMGENWRRTGTV-LAAVQLDD 287 >gi|322613447|gb|EFY10388.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621039|gb|EFY17897.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624103|gb|EFY20937.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628158|gb|EFY24947.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633277|gb|EFY30019.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636145|gb|EFY32853.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639483|gb|EFY36171.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647584|gb|EFY44073.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648768|gb|EFY45215.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653823|gb|EFY50149.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657929|gb|EFY54197.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664032|gb|EFY60231.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668957|gb|EFY65108.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673049|gb|EFY69156.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677960|gb|EFY74023.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681136|gb|EFY77169.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687934|gb|EFY83901.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194870|gb|EFZ80057.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196621|gb|EFZ81769.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202679|gb|EFZ87719.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207834|gb|EFZ92780.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212614|gb|EFZ97431.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214903|gb|EFZ99651.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222634|gb|EGA06999.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225087|gb|EGA09339.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230609|gb|EGA14727.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235040|gb|EGA19126.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239079|gb|EGA23129.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244563|gb|EGA28569.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247178|gb|EGA31144.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253339|gb|EGA37168.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256354|gb|EGA40090.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262470|gb|EGA46026.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267434|gb|EGA50918.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269162|gb|EGA52617.1| putative global regulator [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 326 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|284008423|emb|CBA74869.1| aminomethyltransferase [Arsenophonus nasoniae] Length = 328 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 36/271 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L++ SFI G A +LQ +TAD+ TL + +A +GK+ + Sbjct: 20 LTLMTLNDWSFITATGVDAEKYLQGQLTADITTLTPQQHILTAHCDAKGKMWSTLRLFHY 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGV----------------- 100 E + + S + +L Y + S + + QP + GV Sbjct: 80 NEGFGYI-LRTSVAAKQLSELKKYAVFSQITLSQQPNIMLLGVAGQGARDRLNNHFSQLP 138 Query: 101 ----VLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + ++ T + S ERF I D + D + + I GI + Sbjct: 139 DQEKAVIHLEQTTLLHFSVPSERFLIVTDSATATELTKHFPQHGDSQQWLAFDIAAGIAN 198 Query: 156 PNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDL 213 + + P + L IS KGCY GQE V+R ++R ++ + GT + L Sbjct: 199 IDVE-NSEQFIPQAVNLQALPASISFHKGCYSGQETVARAKYRGANKRAMFWLAGTANTL 257 Query: 214 PPSGSPILTDDIEIG----TLGVVVGKKALA 240 P +G I + +IG G V+ LA Sbjct: 258 PKTGEAI---EWKIGDNWRRTGTVLAAVNLA 285 >gi|170683930|ref|YP_001745051.1| putative global regulator [Escherichia coli SMS-3-5] gi|226730799|sp|B1LD99|YGFZ_ECOSM RecName: Full=tRNA-modifying protein ygfZ gi|170521648|gb|ACB19826.1| tRNA-modifying protein ygfZ [Escherichia coli SMS-3-5] Length = 326 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|170018856|ref|YP_001723810.1| putative global regulator [Escherichia coli ATCC 8739] gi|189041183|sp|B1ITA4|YGFZ_ECOLC RecName: Full=tRNA-modifying protein ygfZ gi|169753784|gb|ACA76483.1| conserved hypothetical protein [Escherichia coli ATCC 8739] Length = 326 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSVLP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVIREDATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|209920352|ref|YP_002294436.1| putative global regulator [Escherichia coli SE11] gi|260857021|ref|YP_003230912.1| putative folate-dependent regulatory protein [Escherichia coli O26:H11 str. 11368] gi|260869575|ref|YP_003235977.1| putative folate-dependent regulatory protein [Escherichia coli O111:H- str. 11128] gi|226730798|sp|B6I731|YGFZ_ECOSE RecName: Full=tRNA-modifying protein ygfZ gi|209913611|dbj|BAG78685.1| conserved hypothetical protein [Escherichia coli SE11] gi|257755670|dbj|BAI27172.1| predicted folate-dependent regulatory protein [Escherichia coli O26:H11 str. 11368] gi|257765931|dbj|BAI37426.1| predicted folate-dependent regulatory protein [Escherichia coli O111:H- str. 11128] gi|323173896|gb|EFZ59525.1| tRNA-modifying protein ygfZ [Escherichia coli LT-68] gi|323180343|gb|EFZ65895.1| tRNA-modifying protein ygfZ [Escherichia coli 1180] gi|323946616|gb|EGB42639.1| folate-binding protein YgfZ [Escherichia coli H120] gi|324119939|gb|EGC13818.1| folate-binding protein YgfZ [Escherichia coli E1167] Length = 326 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|110643047|ref|YP_670777.1| putative global regulator [Escherichia coli 536] gi|191173236|ref|ZP_03034767.1| tRNA-modifying protein ygfZ [Escherichia coli F11] gi|118577993|sp|Q0TDV3|YGFZ_ECOL5 RecName: Full=tRNA-modifying protein ygfZ gi|110344639|gb|ABG70876.1| hypothetical protein ECP_2892 [Escherichia coli 536] gi|190906487|gb|EDV66095.1| tRNA-modifying protein ygfZ [Escherichia coli F11] gi|281179903|dbj|BAI56233.1| conserved hypothetical protein [Escherichia coli SE15] Length = 326 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|187731975|ref|YP_001881668.1| putative global regulator [Shigella boydii CDC 3083-94] gi|226730810|sp|B2U0R5|YGFZ_SHIB3 RecName: Full=tRNA-modifying protein ygfZ gi|187428967|gb|ACD08241.1| tRNA-modifying protein [Shigella boydii CDC 3083-94] gi|320175914|gb|EFW50992.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella dysenteriae CDC 74-1112] Length = 326 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|213619118|ref|ZP_03372944.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 310 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 3 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 62 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 63 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 121 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 122 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 179 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 180 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 238 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 239 ASRVPEAGEDL 249 >gi|153840079|ref|ZP_01992746.1| protein YgfZ [Vibrio parahaemolyticus AQ3810] gi|149746325|gb|EDM57384.1| protein YgfZ [Vibrio parahaemolyticus AQ3810] Length = 322 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 99/272 (36%), Gaps = 34/272 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L + I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER- 119 + +++ +S + + ++ Y + S V IE N V+L + + S ++E Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137 Query: 120 --------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + + +++ + + + + I + + Sbjct: 138 GDVRVINGGTAVKVEANRWLLIVTEEAAQALIENSDAMLTTHELWTRFDIESALP-FVSA 196 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L GIS TKGCY GQE V+R ++R ++ I+ G + Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256 Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242 I + +GTL +A+ + Sbjct: 257 IELERSVGDNWRSVGTLLAHYQFSDNQAMGLI 288 >gi|50550805|ref|XP_502875.1| YALI0D15774p [Yarrowia lipolytica] gi|74634509|sp|Q6C8Y7|CAF17_YARLI RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49648743|emb|CAG81063.1| YALI0D15774p [Yarrowia lipolytica] Length = 479 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 106/272 (38%), Gaps = 57/272 (20%) Query: 4 VYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISKI 60 V L+N ++ + V G+ A L + T V + A L +G+++ + Sbjct: 41 VDLTNSKTMVHVSGRDAAKLLNGLFTLPVSSGAATPFSGVFGAFLNGKGRVITDAFLYTT 100 Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---- 111 E+ +F++E D++ D L+ L +++R+ V +E + WN++ T Sbjct: 101 SNHTEEDQSFVIEFDKAVEDELLLHLKRHRIRAKVKMEKLTDYECIFIWNRDATPDYWRR 160 Query: 112 ----NSSF------------------------------------IDERFSIADVLLHRTW 131 +S F +D+R+ + + + Sbjct: 161 ENECDSGFFQSLCEVAWSVAEVGETSEVEEKNGEPAQKPLYGLLVDDRYPLLGIRMILPA 220 Query: 132 GHN-----EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + ++++ Y+ LR G + + + P+ P ++ +D +NG+ +GCY+ Sbjct: 221 KTSTTYFSAIPSANLTQYNMLRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYV 280 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 GQE+ R H ++RKR + + G Sbjct: 281 GQELTIRTHHTGVVRKRIVPFQLYQEGQEPGE 312 >gi|82545479|ref|YP_409426.1| global regulator [Shigella boydii Sb227] gi|118577995|sp|Q31WG0|YGFZ_SHIBS RecName: Full=tRNA-modifying protein ygfZ gi|81246890|gb|ABB67598.1| conserved hypothetical protein [Shigella boydii Sb227] gi|320184557|gb|EFW59358.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Shigella flexneri CDC 796-83] gi|332090898|gb|EGI95989.1| tRNA-modifying protein ygfZ [Shigella boydii 3594-74] Length = 326 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAADDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|16130800|ref|NP_417374.1| Hda suppressor; also involved in methylthio modification at 2-methylthio-6-iodeadenosine in tRNA [Escherichia coli str. K-12 substr. MG1655] gi|24114152|ref|NP_708662.1| putative global regulator [Shigella flexneri 2a str. 301] gi|30064210|ref|NP_838381.1| putative global regulator [Shigella flexneri 2a str. 2457T] gi|89109677|ref|AP_003457.1| predicted folate-dependent regulatory protein [Escherichia coli str. K-12 substr. W3110] gi|110806801|ref|YP_690321.1| putative global regulator [Shigella flexneri 5 str. 8401] gi|157156395|ref|YP_001464236.1| putative global regulator [Escherichia coli E24377A] gi|157162358|ref|YP_001459676.1| putative global regulator [Escherichia coli HS] gi|170082459|ref|YP_001731779.1| folate-dependent regulatory protein [Escherichia coli str. K-12 substr. DH10B] gi|188494932|ref|ZP_03002202.1| tRNA-modifying protein [Escherichia coli 53638] gi|191165963|ref|ZP_03027799.1| tRNA-modifying protein ygfZ [Escherichia coli B7A] gi|193063561|ref|ZP_03044650.1| tRNA-modifying protein ygfZ [Escherichia coli E22] gi|193070568|ref|ZP_03051507.1| tRNA-modifying protein ygfZ [Escherichia coli E110019] gi|194426392|ref|ZP_03058947.1| tRNA-modifying protein ygfZ [Escherichia coli B171] gi|194436847|ref|ZP_03068947.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1] gi|218555446|ref|YP_002388359.1| putative global regulator [Escherichia coli IAI1] gi|218696493|ref|YP_002404160.1| putative global regulator [Escherichia coli 55989] gi|238902023|ref|YP_002927819.1| putative folate-dependent regulatory protein [Escherichia coli BW2952] gi|253772261|ref|YP_003035092.1| global regulator [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162810|ref|YP_003045918.1| putative global regulator [Escherichia coli B str. REL606] gi|256019303|ref|ZP_05433168.1| putative global regulator [Shigella sp. D9] gi|256024591|ref|ZP_05438456.1| putative global regulator [Escherichia sp. 4_1_40B] gi|260845566|ref|YP_003223344.1| putative folate-dependent regulatory protein [Escherichia coli O103:H2 str. 12009] gi|297518191|ref|ZP_06936577.1| putative global regulator [Escherichia coli OP50] gi|301027803|ref|ZP_07191108.1| folate-binding protein YgfZ [Escherichia coli MS 196-1] gi|307139586|ref|ZP_07498942.1| putative global regulator [Escherichia coli H736] gi|307310483|ref|ZP_07590131.1| folate-binding protein YgfZ [Escherichia coli W] gi|312972860|ref|ZP_07787033.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70] gi|331643589|ref|ZP_08344720.1| tRNA-modifying protein YgfZ [Escherichia coli H736] gi|331669634|ref|ZP_08370480.1| tRNA-modifying protein YgfZ [Escherichia coli TA271] gi|331678886|ref|ZP_08379560.1| tRNA-modifying protein YgfZ [Escherichia coli H591] gi|332280417|ref|ZP_08392830.1| tRNA-modifying protein ygfZ [Shigella sp. D9] gi|83287993|sp|P0ADE8|YGFZ_ECOLI RecName: Full=tRNA-modifying protein ygfZ gi|83287994|sp|P0ADE9|YGFZ_SHIFL RecName: Full=tRNA-modifying protein ygfZ gi|122366369|sp|Q0T0Z9|YGFZ_SHIF8 RecName: Full=tRNA-modifying protein ygfZ gi|166979582|sp|A7ZR07|YGFZ_ECO24 RecName: Full=tRNA-modifying protein ygfZ gi|166979583|sp|A8A439|YGFZ_ECOHS RecName: Full=tRNA-modifying protein ygfZ gi|226730795|sp|B7LYG2|YGFZ_ECO8A RecName: Full=tRNA-modifying protein ygfZ gi|226730796|sp|B1XEI5|YGFZ_ECODH RecName: Full=tRNA-modifying protein ygfZ gi|254814149|sp|B7LF83|YGFZ_ECO55 RecName: Full=tRNA-modifying protein ygfZ gi|259710249|sp|C5A0H0|YGFZ_ECOBW RecName: Full=tRNA-modifying protein ygfZ gi|887848|gb|AAA83079.1| ORF_o326 [Escherichia coli] gi|1789265|gb|AAC75936.1| Hda suppressor; also involved in methylthio modification at 2-methylthio-6-iodeadenosine in tRNA [Escherichia coli str. K-12 substr. MG1655] gi|24053292|gb|AAN44369.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042467|gb|AAP18191.1| hypothetical protein S3083 [Shigella flexneri 2a str. 2457T] gi|85675710|dbj|BAE76963.1| predicted folate-dependent regulatory protein [Escherichia coli str. K12 substr. W3110] gi|110616349|gb|ABF05016.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|157068038|gb|ABV07293.1| tRNA-modifying protein ygfZ [Escherichia coli HS] gi|157078425|gb|ABV18133.1| tRNA-modifying protein ygfZ [Escherichia coli E24377A] gi|169890294|gb|ACB04001.1| predicted folate-dependent regulatory protein [Escherichia coli str. K-12 substr. DH10B] gi|188490131|gb|EDU65234.1| tRNA-modifying protein [Escherichia coli 53638] gi|190903911|gb|EDV63624.1| tRNA-modifying protein ygfZ [Escherichia coli B7A] gi|192930838|gb|EDV83443.1| tRNA-modifying protein ygfZ [Escherichia coli E22] gi|192956151|gb|EDV86615.1| tRNA-modifying protein ygfZ [Escherichia coli E110019] gi|194415700|gb|EDX31967.1| tRNA-modifying protein ygfZ [Escherichia coli B171] gi|194424329|gb|EDX40316.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1] gi|218353225|emb|CAU99146.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli 55989] gi|218362214|emb|CAQ99832.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli IAI1] gi|238862419|gb|ACR64417.1| predicted folate-dependent regulatory protein [Escherichia coli BW2952] gi|242378429|emb|CAQ33210.1| folate-binding protein [Escherichia coli BL21(DE3)] gi|253323305|gb|ACT27907.1| folate-binding protein YgfZ [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974711|gb|ACT40382.1| putative global regulator [Escherichia coli B str. REL606] gi|253978877|gb|ACT44547.1| putative global regulator [Escherichia coli BL21(DE3)] gi|257760713|dbj|BAI32210.1| predicted folate-dependent regulatory protein [Escherichia coli O103:H2 str. 12009] gi|260448056|gb|ACX38478.1| folate-binding protein YgfZ [Escherichia coli DH1] gi|299879065|gb|EFI87276.1| folate-binding protein YgfZ [Escherichia coli MS 196-1] gi|306909378|gb|EFN39873.1| folate-binding protein YgfZ [Escherichia coli W] gi|309703258|emb|CBJ02593.1| tRNA-modifying protein [Escherichia coli ETEC H10407] gi|310332802|gb|EFQ00016.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70] gi|313647938|gb|EFS12384.1| tRNA-modifying protein ygfZ [Shigella flexneri 2a str. 2457T] gi|315062202|gb|ADT76529.1| predicted folate-dependent regulatory protein [Escherichia coli W] gi|315137497|dbj|BAJ44656.1| putative global regulator [Escherichia coli DH1] gi|315614945|gb|EFU95583.1| tRNA-modifying protein ygfZ [Escherichia coli 3431] gi|320202559|gb|EFW77129.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli EC4100B] gi|323162510|gb|EFZ48360.1| tRNA-modifying protein ygfZ [Escherichia coli E128010] gi|323183453|gb|EFZ68850.1| tRNA-modifying protein ygfZ [Escherichia coli 1357] gi|323377214|gb|ADX49482.1| folate-binding protein YgfZ [Escherichia coli KO11] gi|323935870|gb|EGB32169.1| folate-binding protein YgfZ [Escherichia coli E1520] gi|323941581|gb|EGB37761.1| folate-binding protein YgfZ [Escherichia coli E482] gi|323960805|gb|EGB56426.1| folate-binding protein YgfZ [Escherichia coli H489] gi|323971664|gb|EGB66893.1| folate-binding protein YgfZ [Escherichia coli TA007] gi|331037060|gb|EGI09284.1| tRNA-modifying protein YgfZ [Escherichia coli H736] gi|331063302|gb|EGI35215.1| tRNA-modifying protein YgfZ [Escherichia coli TA271] gi|331073716|gb|EGI45037.1| tRNA-modifying protein YgfZ [Escherichia coli H591] gi|332102769|gb|EGJ06115.1| tRNA-modifying protein ygfZ [Shigella sp. D9] gi|332344795|gb|AEE58129.1| tRNA-modifying protein YgfZ [Escherichia coli UMNK88] gi|332753734|gb|EGJ84113.1| tRNA-modifying protein ygfZ [Shigella flexneri K-671] gi|332754471|gb|EGJ84837.1| tRNA-modifying protein ygfZ [Shigella flexneri 2747-71] gi|332765829|gb|EGJ96042.1| folate-dependent regulatory protein [Shigella flexneri 2930-71] gi|332999669|gb|EGK19254.1| tRNA-modifying protein ygfZ [Shigella flexneri VA-6] gi|333000715|gb|EGK20290.1| tRNA-modifying protein ygfZ [Shigella flexneri K-272] gi|333015058|gb|EGK34401.1| tRNA-modifying protein ygfZ [Shigella flexneri K-304] gi|333015229|gb|EGK34571.1| tRNA-modifying protein ygfZ [Shigella flexneri K-227] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|328474112|gb|EGF44917.1| hypothetical protein VP10329_15430 [Vibrio parahaemolyticus 10329] Length = 322 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 98/272 (36%), Gaps = 34/272 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L + I + G +L +T DV++L + A +GK+ F + Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +++ +S + + ++ Y + S V IE N V+L + + S ++E Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137 Query: 121 S---------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + + +++ + + + I + + Sbjct: 138 GDVRIINGGTAVKVEANRWLLVVTEEAAQALIENSDATLTTRELWTRFDIESALP-FVSA 196 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L GIS TKGCY GQE V+R ++R ++ I+ G + Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256 Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242 I + +GTL +A+ + Sbjct: 257 IELERSVGDNWRSVGTLLAHYQFSDNQAMGLI 288 >gi|209695953|ref|YP_002263883.1| hypothetical protein VSAL_I2535 [Aliivibrio salmonicida LFI1238] gi|226730791|sp|B6EKN9|YGFZ_ALISL RecName: Full=tRNA-modifying protein ygfZ gi|208009906|emb|CAQ80219.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 318 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 26/245 (10%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + I + G +LQ +TADV+TLP +GK+ F + D + Sbjct: 25 LNDWALITMIGNDKKSYLQGQVTADVVTLPQDDITFGGHCDAKGKLWSIFQLFNHN-DGY 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------WNQEHTFSNSSFID-- 117 L RS ++ + ++ Y + S V I + + +S W +HT ++++ Sbjct: 84 ALFQRRSAIETELTEIKKYSVFSKVDIAVGDDVLLGISGKKATDWVNKHTTTDANVRACE 143 Query: 118 ----ERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIVDPNTDFLPSTI 165 + S LL T H + I D + I HG+ + + L + Sbjct: 144 LGTFAKISETQWLLVTTPEHKKNIINQESNTVLCDESLWSLHTIQHGLPQLD-NALSNAH 202 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDD 224 P + + GIS KGCY GQE V+R ++R I ++ +++G ++ +P +G I + Sbjct: 203 IPQAMNLQAVGGISFAKGCYTGQETVARAKYRGINKRAMYLLSGQSNSIPVAGDAI---E 259 Query: 225 IEIGT 229 +G Sbjct: 260 RSVGE 264 >gi|26249314|ref|NP_755354.1| putative global regulator [Escherichia coli CFT073] gi|81474766|sp|Q8FE70|YGFZ_ECOL6 RecName: Full=tRNA-modifying protein ygfZ gi|26109722|gb|AAN81927.1|AE016766_15 Unknown protein from 2D-page [Escherichia coli CFT073] gi|307554875|gb|ADN47650.1| tRNA-modifying protein YgfZ [Escherichia coli ABU 83972] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LATVKLED 287 >gi|323188703|gb|EFZ73988.1| tRNA-modifying protein ygfZ [Escherichia coli RN587/1] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|293412257|ref|ZP_06654980.1| tRNA-modifying protein ygfZ [Escherichia coli B354] gi|291469028|gb|EFF11519.1| tRNA-modifying protein ygfZ [Escherichia coli B354] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTADQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|56414994|ref|YP_152069.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615996|ref|YP_001589961.1| putative global regulator [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550067|ref|ZP_02343824.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231154|ref|ZP_02656212.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168242836|ref|ZP_02667768.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445927|ref|YP_002042300.1| putative global regulator [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449722|ref|YP_002047033.1| putative global regulator [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469818|ref|ZP_03075802.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194470174|ref|ZP_03076158.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249201|ref|YP_002147961.1| putative global regulator [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363923|ref|YP_002143560.1| global regulator [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386928|ref|ZP_03213540.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353972|ref|YP_002227773.1| global regulator [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858311|ref|YP_002244962.1| global regulator [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|81360906|sp|Q5PJF4|YGFZ_SALPA RecName: Full=tRNA-modifying protein ygfZ gi|189041185|sp|A9N3M5|YGFZ_SALPB RecName: Full=tRNA-modifying protein ygfZ gi|226730802|sp|B5F5H2|YGFZ_SALA4 RecName: Full=tRNA-modifying protein ygfZ gi|226730804|sp|B5QXH5|YGFZ_SALEP RecName: Full=tRNA-modifying protein ygfZ gi|226730805|sp|B5RE09|YGFZ_SALG2 RecName: Full=tRNA-modifying protein ygfZ gi|226730806|sp|B4TGW8|YGFZ_SALHS RecName: Full=tRNA-modifying protein ygfZ gi|226730807|sp|B4T543|YGFZ_SALNS RecName: Full=tRNA-modifying protein ygfZ gi|226730808|sp|B5BFL3|YGFZ_SALPK RecName: Full=tRNA-modifying protein ygfZ gi|56129251|gb|AAV78757.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161365360|gb|ABX69128.1| hypothetical protein SPAB_03796 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404590|gb|ACF64812.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408026|gb|ACF68245.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456182|gb|EDX45021.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456538|gb|EDX45377.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197095400|emb|CAR60959.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212904|gb|ACH50301.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199604026|gb|EDZ02571.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205273753|emb|CAR38748.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324690|gb|EDZ12529.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334562|gb|EDZ21326.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337989|gb|EDZ24753.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206710114|emb|CAR34469.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629086|gb|EGE35429.1| putative global regulator [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|168823060|ref|ZP_02835060.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340631|gb|EDZ27395.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087478|emb|CBY97243.1| tRNA-modifying protein ygfZ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|119476432|ref|ZP_01616783.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2143] gi|119450296|gb|EAW31531.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2143] Length = 359 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 30/229 (13%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G FLQ T DV + + A TP+G+++ FL++ E + ++L Sbjct: 49 YGLLSISGPDTSKFLQGQTTCDVDLVTCSHSTLGAYCTPKGRVISSFLLASKEPNEYLLR 108 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------NSS 114 + S S Y + S E++ V + E + +S Sbjct: 109 LRTSVLQSTQSVFSKYIVFSKAEQEVKSDQYVCICLAGETAKNTIQSLFNVATSDIYQTS 168 Query: 115 FIDERFSI---ADVLLHRTWGHNEKIAS------------DIKTYHELRINHGIVDPNTD 159 ++++ F+I D L+H W ++ + + L I+ GI D ++ Sbjct: 169 WLNDNFTIQLDTDGLIHECWILESELEQLWPRLSKGLELKGSRFWELLAISRGIGD-VSE 227 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 P + +S KGCY GQE+V+R+Q++ +++ + Sbjct: 228 QTVDMFIPQMLNYQITGAVSFNKGCYTGQEIVARMQYKGKLKRPMYRVK 276 >gi|16766349|ref|NP_461964.1| global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994112|ref|ZP_02575204.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168261789|ref|ZP_02683762.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197263849|ref|ZP_03163923.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|81521741|sp|Q8ZM80|YGFZ_SALTY RecName: Full=tRNA-modifying protein ygfZ gi|16421599|gb|AAL21923.1| putative aminomethyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197242104|gb|EDY24724.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328009|gb|EDZ14773.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205349199|gb|EDZ35830.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248180|emb|CBG26016.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995203|gb|ACY90088.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159604|emb|CBW19123.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914070|dbj|BAJ38044.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225722|gb|EFX50776.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131404|gb|ADX18834.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989915|gb|AEF08898.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS ++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|198242202|ref|YP_002217026.1| putative global regulator [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226730803|sp|B5FUG1|YGFZ_SALDC RecName: Full=tRNA-modifying protein ygfZ gi|197936718|gb|ACH74051.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624794|gb|EGE31139.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 326 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS ++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|291086195|ref|ZP_06355083.2| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220] gi|291068505|gb|EFE06614.1| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220] Length = 306 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 42/270 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYIQGQVTADVSQMTEHQHVLAAHCDAKGKMWSNLRLFRNSDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN----------- 112 LE R+ RD+ + +L Y + S V+I + V + +N Sbjct: 63 WLE-RRNLRDAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFSELPNSDKQ 121 Query: 113 -----------SSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 ERF + A+ L+ + G E ++ + + L I GI Sbjct: 122 VISEGACTILWFEHPAERFLLIVDVATAESLVEKLRGEAE--LNNSQQWLALDIEAGIPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 +T P + L GIS KGCY GQE+V+R + R ++ + GT +P Sbjct: 180 IDT-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGTASRVP 238 Query: 215 PSGSPILTDDIEIGT----LGVVVGKKALA 240 +G + ++++G G V+ LA Sbjct: 239 EAGEDL---ELKMGENWRRTGTVLAAVQLA 265 >gi|168463783|ref|ZP_02697700.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633631|gb|EDX52045.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 326 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 110/277 (39%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +P +G + ++++G G LA A++D Sbjct: 255 ASRVPEAGEDL---ELQMGENWRRTGAI-LAAAQLDD 287 >gi|325498459|gb|EGC96318.1| global regulator [Escherichia fergusonii ECD227] Length = 326 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|254522474|ref|ZP_05134529.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14] gi|219720065|gb|EED38590.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14] Length = 291 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 17/268 (6%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + + G A+ F A ++DV LP + SA L+ +G+ L F + ++ ED Sbjct: 14 RLPGHPLLSLQGADAVVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLAEDH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117 +L + D++ +L + R V + ++ V ++ S ++ Sbjct: 74 VLLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAHAAGDGWE 133 Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 R G A+ + + + +G+ + P Sbjct: 134 LDLGSDALPRTLRIGAADAFAAGSEADEAAFALAWRQADLRYGLPRL-EESQREVWTPQQ 192 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 +D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAMPAQAGDGVQQDGAALGT 251 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257 + V G ALA+ ++ D ++ G A+ Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGGAV 279 >gi|204928215|ref|ZP_03219415.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322537|gb|EDZ07734.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 326 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS ++ + +L Y + S V+I ++ Sbjct: 79 RDGFAWIE-RRSVHEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T ERF + A++L + G E ++ + + L I Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +P +G + ++++G G LA A++D Sbjct: 255 ASRVPEAGEDL---ELQMGENWRRTGAI-LAAAQLDD 287 >gi|320540113|ref|ZP_08039768.1| putative predicted folate-dependent regulatory protein [Serratia symbiotica str. Tucson] gi|320029779|gb|EFW11803.1| putative predicted folate-dependent regulatory protein [Serratia symbiotica str. Tucson] Length = 328 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 34/249 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + + G + +LQ +TAD+ L +GK+ + Sbjct: 20 LTLISLEDWALVTLEGPDTVKYLQGQVTADIDALAADQHVPCGHCDAKGKMWSTLRLFHR 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E LE RS S + ++ Y + S V I ++ Sbjct: 80 GEGFAYLE-RRSVLGSQLAEIKKYAVFSKVTIAADNDAVLLGVAGFQARAALASTFAILP 138 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T + ERF ++A+ L+ + H++ +D + + L I Sbjct: 139 DAKHQVVQEGDTTLLQFTEPAERFLLVTTTTVAEQLVTKL--HDQAELNDSRQWLALDIE 196 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + + P + L GIS +KGCY GQE+V+R + R ++ + G Sbjct: 197 AGYP-IIDNANSAQLIPQATNLQALQGISFSKGCYTGQEMVARAKFRGANKRALYWLEGR 255 Query: 211 DDLPPSGSP 219 P + Sbjct: 256 AGRTPQAAE 264 >gi|258622355|ref|ZP_05717380.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585371|gb|EEW10095.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 366 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 30/288 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 66 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEEQQFTFGAHCDAKGKVWSVFRLFHHN- 124 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113 D + + +S + + +L Y + S V I + + +Q + + +S Sbjct: 125 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 184 Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163 R S LL T E+ + + + + I + T + Sbjct: 185 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLCVEQALWTCMDIEEAVP-VVTQNAQN 243 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S + Sbjct: 244 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 303 Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263 + +G G+ +AI I + + +++G+ L + Sbjct: 304 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 350 >gi|226480062|emb|CAX73327.1| hypotherical protein [Schistosoma japonicum] Length = 396 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 45/244 (18%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S L +S I V G SA FLQ + T D+ ++ + + +L I Sbjct: 21 LSISQLKERSLICVRGTSADEFLQGLTTNDIKSINHPNSFM---------VLTDAFIYHT 71 Query: 61 E-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------ 103 + +++E+D + L+ L Y LR V I+ + ++ Sbjct: 72 NRLSANQSDYLIEVDANYVPDLVKHLNRYNLRGKVKIDANVPIHLWIAMPKSKQSNKLSD 131 Query: 104 ---WNQEHTFSNSSFI-------DER---------FSIADVLLHRTWGHNEKIASDIKTY 144 W+ +F+ S D R S D ++ + + DI Y Sbjct: 132 YKAWSPVDSFALSDQRQLIFFASDPRGISGWSGRILSTPDASVNDIFPSCDTHPLDISLY 191 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 H R G+ + +F+ + P +A DL G+S +KGCYIGQE+ +R +IR+R Sbjct: 192 HTARWELGLPEGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGVIRRRY 251 Query: 205 MIIT 208 + I Sbjct: 252 VPIK 255 >gi|332752935|gb|EGJ83319.1| tRNA-modifying protein ygfZ [Shigella flexneri 4343-70] gi|333000021|gb|EGK19604.1| tRNA-modifying protein ygfZ [Shigella flexneri K-218] Length = 326 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 VSRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|227328389|ref|ZP_03832413.1| putative global regulator [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 333 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TADV LP A +GK+ + Sbjct: 26 TLISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHTLCAHCDAKGKMWSNLRLFHHG 85 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101 E +E R+ RD+ + +L Y + S I ++ Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPD 144 Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + ++ T + + ERF L G + +D + L I G Sbjct: 145 VEHPVVQHEGATLLHFAHPAERFLLVLSPEHSASLLEQLGDKVSL-NDSCQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211 ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G + Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262 Query: 212 DLPPSGSPI 220 +P +G + Sbjct: 263 KVPQAGDDL 271 >gi|91212277|ref|YP_542263.1| putative global regulator [Escherichia coli UTI89] gi|117625129|ref|YP_854117.1| putative global regulator [Escherichia coli APEC O1] gi|218559891|ref|YP_002392804.1| global regulator [Escherichia coli S88] gi|218691023|ref|YP_002399235.1| putative global regulator [Escherichia coli ED1a] gi|237706457|ref|ZP_04536938.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA] gi|306812199|ref|ZP_07446397.1| putative global regulator [Escherichia coli NC101] gi|331648645|ref|ZP_08349733.1| tRNA-modifying protein YgfZ [Escherichia coli M605] gi|331659028|ref|ZP_08359970.1| tRNA-modifying protein YgfZ [Escherichia coli TA206] gi|118577994|sp|Q1R7D2|YGFZ_ECOUT RecName: Full=tRNA-modifying protein ygfZ gi|166979584|sp|A1AF88|YGFZ_ECOK1 RecName: Full=tRNA-modifying protein ygfZ gi|226730792|sp|B7MM85|YGFZ_ECO45 RecName: Full=tRNA-modifying protein ygfZ gi|254814150|sp|B7MZ51|YGFZ_ECO81 RecName: Full=tRNA-modifying protein ygfZ gi|91073851|gb|ABE08732.1| 2D-phage unknown protein [Escherichia coli UTI89] gi|115514253|gb|ABJ02328.1| putative global regulator [Escherichia coli APEC O1] gi|218366660|emb|CAR04414.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli S88] gi|218428587|emb|CAR09368.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia coli ED1a] gi|222034593|emb|CAP77335.1| tRNA-modifying protein ygfZ [Escherichia coli LF82] gi|226899497|gb|EEH85756.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA] gi|294490592|gb|ADE89348.1| tRNA-modifying protein ygfZ [Escherichia coli IHE3034] gi|305854237|gb|EFM54675.1| putative global regulator [Escherichia coli NC101] gi|307625529|gb|ADN69833.1| putative global regulator [Escherichia coli UM146] gi|312947431|gb|ADR28258.1| putative global regulator [Escherichia coli O83:H1 str. NRG 857C] gi|323951663|gb|EGB47538.1| folate-binding protein YgfZ [Escherichia coli H252] gi|323957381|gb|EGB53103.1| folate-binding protein YgfZ [Escherichia coli H263] gi|330908930|gb|EGH37444.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli AA86] gi|331042392|gb|EGI14534.1| tRNA-modifying protein YgfZ [Escherichia coli M605] gi|331053610|gb|EGI25639.1| tRNA-modifying protein YgfZ [Escherichia coli TA206] Length = 326 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|331654396|ref|ZP_08355396.1| tRNA-modifying protein YgfZ [Escherichia coli M718] gi|331047778|gb|EGI19855.1| tRNA-modifying protein YgfZ [Escherichia coli M718] Length = 326 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTVDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++TG+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|289209042|ref|YP_003461108.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix] gi|288944673|gb|ADC72372.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix] Length = 348 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 100/251 (39%), Gaps = 32/251 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ ++V G A FLQ D+ + ++ S+ +P+G+ F + + D Sbjct: 41 CDLSHRGLLEVRGDDATEFLQGQFGNDITQVDASHSQISSYSSPKGRAYAVFRVLRTA-D 99 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--------SSF 115 +++LE+ + +++ +L + LR++V+IE + + + S + Sbjct: 100 SYLLEMPADRIEAIAKRLRMFVLRAHVVIERADDSHIHFGLSGPDAESELNNALGVCPAN 159 Query: 116 IDERFSIADVLLHRTWGHNEKI---------------------ASDIKTYHELRINHGIV 154 +D+ V + R G + + + + L I G+ Sbjct: 160 VDDVVEKDGVTVVRVNGVHPRFELFGELEPMRTAWDKLNVRSGPVGPREWALLDILAGMP 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + P + L I+ KGCY GQEVV+R+ + +++R + P Sbjct: 220 -TVVEATSELFVPQMLNLHALGAINFEKGCYPGQEVVARMHYLGKLKRRMFRLAIHAAEP 278 Query: 215 P-SGSPILTDD 224 P GSP+ D Sbjct: 279 PQPGSPVYRAD 289 >gi|332087725|gb|EGI92852.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 155-74] Length = 305 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFGHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|215488198|ref|YP_002330629.1| putative global regulator [Escherichia coli O127:H6 str. E2348/69] gi|254814148|sp|B7UHU7|YGFZ_ECO27 RecName: Full=tRNA-modifying protein ygfZ gi|215266270|emb|CAS10699.1| predicted folate-dependent regulatory protein [Escherichia coli O127:H6 str. E2348/69] Length = 326 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVIDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|218550146|ref|YP_002383937.1| global regulator [Escherichia fergusonii ATCC 35469] gi|226730800|sp|B7LPB2|YGFZ_ESCF3 RecName: Full=tRNA-modifying protein ygfZ gi|218357687|emb|CAQ90328.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation [Escherichia fergusonii ATCC 35469] Length = 326 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 104/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A+ L + G E ++ + + L I Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|90408990|ref|ZP_01217121.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas sp. CNPT3] gi|90309904|gb|EAS38058.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas sp. CNPT3] Length = 324 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 40/286 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + I V G+ I FLQ +T D+ +L +A TPQGK+ F + +E+ Sbjct: 19 CPLDSWDVIAVQGEDRISFLQGQLTCDINSLKIGEQTLAAQCTPQGKVCSLFHVILLEDR 78 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L+ S + + L Y S V I + + L + F + E S Sbjct: 79 VLFLQ-PSSVTEKQLTALQKYAAFSKVKIHKDSEYQAITLLGEKSSDFISQELTTENISK 137 Query: 123 ADVLLH-------------------------RTWGHNEKIAS--DIKTYHELRINHGIVD 155 + +LL E A+ D ++ + I G+ Sbjct: 138 SGLLLPNGMHISKQLTPSLRYLLVLKKEQGSALLKQLEDKATYHDDSLWNAMNIAAGMA- 196 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + P + L+GIS TKGCYIGQE ++R ++R ++ I++G P Sbjct: 197 FIEEINSEKFIPQMLNLQALDGISFTKGCYIGQETIARAKYRGANKRALFILSGHASCAP 256 Query: 216 SGSP---ILTDD--IEIGTLGVVVGK-----KALAIARIDKVDHAI 251 +L ++ IG++ + LA+ D I Sbjct: 257 KAGDTLQLLLNNQWKRIGSVISACQYGDAHIEVLAVLPKDSQADDI 302 >gi|323966700|gb|EGB62132.1| folate-binding protein YgfZ [Escherichia coli M863] gi|327251662|gb|EGE63348.1| tRNA-modifying protein ygfZ [Escherichia coli STEC_7v] Length = 326 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L + G E ++ + + L I Sbjct: 138 TKEKQVVKEGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|324115084|gb|EGC09049.1| folate-binding protein YgfZ [Escherichia fergusonii B253] Length = 326 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|237729839|ref|ZP_04560320.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2] gi|226908445|gb|EEH94363.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2] Length = 327 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 42/275 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGVDSEKYIQGQVTADVSQMTEHQHLLAAHCDAKGKMWSNLRLFRQ 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + LE RS RD+ + +L Y + S V I ++ Sbjct: 79 GDGFAWLE-RRSLRDAQLTELKKYAVFSKVAIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L+ + G E ++ + + L I Sbjct: 138 NSDKQVITEGASTVLWFEHPAERFLLIVDATTAETLVEKLRGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI +T + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGIPVIDT-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGA 254 Query: 211 DD-LPPSGSPILTDDIEIGT----LGVVVGKKALA 240 +P +G + ++++G G V+ LA Sbjct: 255 AGRVPEAGEDL---ELKMGENWRRTGTVLAAVQLA 286 >gi|170765986|ref|ZP_02900797.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627] gi|170125132|gb|EDS94063.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627] Length = 326 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 104/276 (37%), Gaps = 38/276 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVCQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+S + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDGERVLLGVAGFQARAALANLFSELP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A+ L+ + G E ++ + + L I Sbjct: 138 SKEKQVVREGATTLLWFEHPAERFLLVTDEATANTLVDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGLPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLVGH 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 LP +G + ++++G G A+ R D Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTVLAAVKRED 287 >gi|312964841|ref|ZP_07779081.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75] gi|312290397|gb|EFR18277.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75] Length = 326 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVIDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPI 220 LP +G + Sbjct: 255 ASRLPEAGEDL 265 >gi|262042539|ref|ZP_06015696.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010968|ref|ZP_08306933.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3] gi|259040099|gb|EEW41213.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534345|gb|EGF60955.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3] Length = 306 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 89/244 (36%), Gaps = 31/244 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + +LQ ITADV L +A +GK+ + + E Sbjct: 3 LDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRREGGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS RD+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAATP 121 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPN 157 + + ERF + + E ++ + + L I G+ + Sbjct: 122 VVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAGLPVID 181 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPS 216 + P + L GIS KGCY GQE+V+R + R ++ ++GT +P + Sbjct: 182 S-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTASRVPEA 240 Query: 217 GSPI 220 G + Sbjct: 241 GEDL 244 >gi|26988156|ref|NP_743581.1| hypothetical protein PP_1423 [Pseudomonas putida KT2440] gi|24982889|gb|AAN67045.1|AE016333_6 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 313 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112 ++L + D+ + L Y + S + + Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLVVPAAAG 126 Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + ++ +AD R + + +I GI Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPVADAEPVRQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHA 250 + I + +G + + G + LA+ + V+ Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGTGCELLAVLSAEAVEDG 284 >gi|167035381|ref|YP_001670612.1| folate-binding protein YgfZ [Pseudomonas putida GB-1] gi|166861869|gb|ABZ00277.1| folate-binding protein YgfZ [Pseudomonas putida GB-1] Length = 313 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 95/279 (34%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119 ++L + D+ + L Y + S + + + +D Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESSAWARFGLQGGDAALQALGLDVPAAAG 126 Query: 120 ---------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 AD R + + +I GI Sbjct: 127 STVRHAGLIAVAVSAGRVELWVPAADAEPVRQALAAALPEGSVNDWLLGQIRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G Sbjct: 186 GQTHELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245 Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250 + I + +G + + G + LA+ D V Sbjct: 246 AEIFSPTHGSSVGEVVIAASNGPGCELLAVLSADAVADD 284 >gi|323495995|ref|ZP_08101059.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326] gi|323318957|gb|EGA71904.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326] Length = 322 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 29/269 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ +L++ I + G+ +LQ +T DV+TL + A +GK+ F + Sbjct: 21 LALAHLTSWGAINMVGQDKKSYLQGQVTCDVVTLAEDQSTFGAHCDAKGKVWSAFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLSWNQ 106 + +L+ +S D+ + +L Y + S V I IQ I+ + S Sbjct: 81 NDGYAMLQ-PKSAIDAELVELKKYAIFSKVEITQSQDIVLGLVGQNAIQFIDTITESRGD 139 Query: 107 EHTFSNSSFI---DERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 F + + +R+ + + + D + L I + + Sbjct: 140 VRPFPGGTAVMVDQQRWLLMLSEESAQQLCSSISAPLVDEALWTRLDIEAALPVLGAE-Q 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI 220 + P + + GIS TKGCY GQE V+R ++R I ++ ++ G+ G I Sbjct: 199 QTEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGINKRAMYMVKGSISTDIQLGEEI 258 Query: 221 L----TDDIEIGTLGVV---VGKKALAIA 242 + GTL +A+ + Sbjct: 259 ERAVGENWRSAGTLLTHYQFADGQAIGLV 287 >gi|262170581|ref|ZP_06038259.1| glycine cleavage T-protein [Vibrio mimicus MB-451] gi|261891657|gb|EEY37643.1| glycine cleavage T-protein [Vibrio mimicus MB-451] Length = 323 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 30/288 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEEQQVTFGAHCDAKGKVWSVFRLFHHN- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113 D + + +S + + +L Y + S V I + + +Q + + +S Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 141 Query: 114 ---SFIDERFSIADVLLHRTWGHNEKIASDI-------KTYHELRINHGIVDPNTDFLPS 163 R S LL T E+ + + + I + T + Sbjct: 142 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLRVEQALWTRMDIEEAVP-VVTQNAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S + Sbjct: 201 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 260 Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263 + +G G+ +AI I + + +++G+ L + Sbjct: 261 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 307 >gi|157148435|ref|YP_001455754.1| putative global regulator [Citrobacter koseri ATCC BAA-895] gi|157085640|gb|ABV15318.1| hypothetical protein CKO_04260 [Citrobacter koseri ATCC BAA-895] Length = 310 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV L + A +GK+ + + Sbjct: 3 LTLITLDDWALASITGTDSEKYMQGQVTADVNQLTEQQHLLVAHCDAKGKMWSNLRLFRD 62 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + LE RS R++ + +L Y + S V I ++ Sbjct: 63 GDGFAWLE-RRSLREAQLTELKKYAVFSKVAIAPDDERVLLGIAGFQARAALANIFSELP 121 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L + G E ++ + + L I Sbjct: 122 NSEKQVVSEGASTLLWFEHPAERFLLITDVATAESLTEKLRG--EAALNNSQQWLALDIE 179 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI ++ P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 180 AGIPVIDS-ANSGQFIPQATNLQALGGISFKKGCYSGQEMVARAKFRGANKRALWSLAGK 238 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 239 ASRVPETGEDL 249 >gi|323978809|gb|EGB73890.1| folate-binding protein YgfZ [Escherichia coli TW10509] Length = 326 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L + G E ++ + + L I Sbjct: 138 TKEKQVVKEGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|294340169|emb|CAZ88541.1| putative Glycine cleavage T protein (aminomethyl transferase) [Thiomonas sp. 3As] Length = 317 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 105/315 (33%), Gaps = 49/315 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++ Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118 + L +D S + + +L + LR ++ + + + Sbjct: 65 EQIGLLLDVSIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLTPPAQP 124 Query: 119 ---RFSIADVLLHRTWGHNEKI---------------------------ASDIKTYHELR 148 R + LL R + A + Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQATQAEQAALRAELAALPALSPSEWALQD 184 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G+ P +L+ G++ KGCY GQEVV+R Q+R +++R +++ Sbjct: 185 IRAGLPHLTA-ATQQLFVPQMLNFELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVS 243 Query: 209 GTDDLPPSGSPILTDDIEIGTL--------GVVVGKKALAIARIDKVDHA-----IKKGM 255 G + P G ++ ALA +I + +G Sbjct: 244 GPAAMQP-GQELVHAADPGQPCGVVVNAAADAAGVWWALAELKIALAEQPGLHLGSAEGP 302 Query: 256 ALTVHGVRVKASFPH 270 L + + + P Sbjct: 303 ELKLGALPYALTAPD 317 >gi|324017296|gb|EGB86515.1| folate-binding protein YgfZ [Escherichia coli MS 117-3] Length = 305 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|251791001|ref|YP_003005722.1| folate-binding protein YgfZ [Dickeya zeae Ech1591] gi|247539622|gb|ACT08243.1| folate-binding protein YgfZ [Dickeya zeae Ech1591] Length = 326 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 31/248 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TADV L A +GK+ + Sbjct: 19 TLMSLDDWALVTLTGPDTVKYLQGQLTADVNDLQSSEQVLCAHCDAKGKMWSSIRLFHHG 78 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQPI 97 + LE RS RD+ + +L Y + S I + P Sbjct: 79 DGLAYLE-RRSIRDTQVTELKKYAVFSKTTIAADDGTILLGAAGLNIRALLAPLFDALPD 137 Query: 98 NGVVLSWNQEHTFSNSSFIDERF-SIADVLLHRTWGHN---EKIASDIKTYHELRINHGI 153 G + T ERF + D T + +D + + L I G Sbjct: 138 AGNTVVHQPGATLLYLPSPTERFLLVLDAQRAATLIDALQPQVAFNDSRQWLALDIEAGQ 197 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDD 212 ++ + P + L GIS TKGCY GQE+V+R ++R ++ + G + Sbjct: 198 PIIDS-ANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGPSTQ 256 Query: 213 LPPSGSPI 220 +P +G + Sbjct: 257 MPAAGDEL 264 >gi|293449221|ref|ZP_06663642.1| global regulator [Escherichia coli B088] gi|291322311|gb|EFE61740.1| global regulator [Escherichia coli B088] Length = 326 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 104/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS + + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVCEPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|320195017|gb|EFW69646.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Escherichia coli WV_060327] Length = 326 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEYQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|255019683|ref|ZP_05291762.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Acidithiobacillus caldus ATCC 51756] gi|254970906|gb|EET28389.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Acidithiobacillus caldus ATCC 51756] Length = 321 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 52/313 (16%) Query: 3 SVYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 LS + G A FLQ + D+ +LP + S+ T +G+++ F + + + Sbjct: 7 LAPLSEELGILHCHGADAEKFLQGQFSNDLTSLPSPGGQWSSYSTAKGRMIANFYLLR-D 65 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------NQEHT 109 +D F L + R +++ ++L ++L + V IE +L+ E Sbjct: 66 DDGFWLLLSRDLTETVAERLRKFRLMAKVDIEDAGTTHALLALWGAGATEVLGNPGGEDV 125 Query: 110 FSNSSFIDERFSIADVLLH----------------------RTWGHNEKIASDIKTYHEL 147 + + R V L R G +E +D + Sbjct: 126 PATPHAVSVRNGARIVRLPWPEPSFLILASGDDIASWGEQLRARGAHEATGAD---WRLG 182 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 I GI N + P + +++L GIS TKGCY GQE+V+R + ++ + + Sbjct: 183 SIRAGIAFINA-ATTEQVIPQELNLEVLGGISFTKGCYPGQEIVARSHYLGRLKNQCYRL 241 Query: 208 TGTDDLPPSGSPILT---DDIEIGTL--GVVVGK---KALAIARIDKVDH---AIKKGMA 256 L P G I + + IG + VG +ALA+ R + +H ++ Sbjct: 242 RAHAPLAP-GRAIFSAAMGEQSIGLVIQAAAVGDGSFEALAVVRAEDAEHSTLGLEAQGQ 300 Query: 257 LTVHGVRVKASFP 269 + + + + S P Sbjct: 301 VPLEKLELPYSLP 313 >gi|229524458|ref|ZP_04413863.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae bv. albensis VL426] gi|229527079|ref|ZP_04416474.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae 12129(1)] gi|229335476|gb|EEO00958.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae 12129(1)] gi|229338039|gb|EEO03056.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae bv. albensis VL426] Length = 339 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304 >gi|300921231|ref|ZP_07137604.1| folate-binding protein YgfZ [Escherichia coli MS 115-1] gi|300411837|gb|EFJ95147.1| folate-binding protein YgfZ [Escherichia coli MS 115-1] Length = 305 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------------- 105 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSVLPSKEKQ 121 Query: 106 ----QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 T ERF + A++L + G E ++ + + L I G Sbjct: 122 VIREDATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|37681026|ref|NP_935635.1| aminomethyltransferase [Vibrio vulnificus YJ016] gi|37199776|dbj|BAC95606.1| predicted aminomethyltransferase [Vibrio vulnificus YJ016] Length = 343 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 45 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 104 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-------------HTF 110 +L+ D+S D + +L Y + + V I + + GV ++ TF Sbjct: 105 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 163 Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + + + +R+ + A+ D + I F + Sbjct: 164 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPA-FAQNE 222 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I + Sbjct: 223 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIEPSAPETTISL-E 281 Query: 225 IEIG 228 +G Sbjct: 282 RSVG 285 >gi|229507469|ref|ZP_04396974.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae BX 330286] gi|229512336|ref|ZP_04401815.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae B33] gi|229519472|ref|ZP_04408915.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae RC9] gi|229606974|ref|YP_002877622.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae MJ-1236] gi|229344161|gb|EEO09136.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae RC9] gi|229352301|gb|EEO17242.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae B33] gi|229354974|gb|EEO19895.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae BX 330286] gi|229369629|gb|ACQ60052.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae MJ-1236] Length = 339 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304 >gi|254507542|ref|ZP_05119676.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16] gi|219549612|gb|EED26603.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16] Length = 321 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 29/250 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + +L++ I + G +LQ +T DV+TL + A +GK+ F + Sbjct: 22 ALTHLTSWGAISMIGDDKKSYLQGQVTCDVVTLEQTQSTFGAHCDAKGKVWSVFRLFHHN 81 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSF 115 + + +S D + +L Y + S V I W + Sbjct: 82 G-GYAMVQPKSAIDVELTELKKYAIFSKVDIAQSDDVLFGVMGEQATFWVDSLSNETGDV 140 Query: 116 IDERFSIADVLLHRTWG---------------HNEKIASDIKTYHELRINHGIVDPNTDF 160 A + + W +++ + TY+E I + + + Sbjct: 141 RPIDGGTAVKVGPQRWLLIVSEASVESLLANCSAQRVEESLWTYYE--IEAALPFVSNE- 197 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSP 219 + P + + GIS TKGCY GQE V+R ++R + ++ I+ GT G+ Sbjct: 198 QQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKRAMFIVKGTTASAIEEGAE 257 Query: 220 ILTDDIEIGT 229 + + +G Sbjct: 258 L---ERAVGE 264 >gi|300995669|ref|ZP_07181197.1| folate-binding protein YgfZ [Escherichia coli MS 200-1] gi|300304777|gb|EFJ59297.1| folate-binding protein YgfZ [Escherichia coli MS 200-1] gi|324005551|gb|EGB74770.1| folate-binding protein YgfZ [Escherichia coli MS 57-2] gi|324011751|gb|EGB80970.1| folate-binding protein YgfZ [Escherichia coli MS 60-1] Length = 305 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|227888448|ref|ZP_04006253.1| GCV family glycine cleavage complex aminomethyltransferase [Escherichia coli 83972] gi|300980307|ref|ZP_07174961.1| folate-binding protein YgfZ [Escherichia coli MS 45-1] gi|301049317|ref|ZP_07196287.1| folate-binding protein YgfZ [Escherichia coli MS 185-1] gi|227834717|gb|EEJ45183.1| GCV family glycine cleavage complex aminomethyltransferase [Escherichia coli 83972] gi|300298916|gb|EFJ55301.1| folate-binding protein YgfZ [Escherichia coli MS 185-1] gi|300409315|gb|EFJ92853.1| folate-binding protein YgfZ [Escherichia coli MS 45-1] gi|315293868|gb|EFU53220.1| folate-binding protein YgfZ [Escherichia coli MS 153-1] Length = 305 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LATVKLED 266 >gi|323491208|ref|ZP_08096394.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG 20546] gi|323314576|gb|EGA67654.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG 20546] Length = 322 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 29/269 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L++ I + G +LQ +T DV+TL ++ A +GK+ F + Sbjct: 21 LAIAPLNSWGAITMIGDDKKSYLQGQVTCDVVTLEPHLSTFGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + + S D + ++ Y + S V I+ + + + F +S Sbjct: 81 NG-GYAMFQPTSVIDKELAEIKKYAIFSKVEIKQSEEIALGVMGEKATEFIDSLSSQTGD 139 Query: 116 -----------IDER---FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 IDE+ +A + ++ + + L I G+ + Sbjct: 140 VRPVEGGTAVKIDEQRWLLLVAPDAAEQLVTTSQADKVNESLWTLLDIKAGLPILTAE-Q 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGS- 218 + P + ++GIS TKGCY GQE V+R ++R I ++ I+ G D+P + Sbjct: 199 QNEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRALFIVKGEAQQDIPANAEL 258 Query: 219 --PILTDDIEIGTLGVV---VGKKALAIA 242 + + G L +A+A+ Sbjct: 259 ERAVGENWRSAGKLLASYRFSDNQAIALV 287 >gi|190573775|ref|YP_001971620.1| putative aminomethyl transferase [Stenotrophomonas maltophilia K279a] gi|190011697|emb|CAQ45316.1| putative aminomethyl transferase [Stenotrophomonas maltophilia K279a] Length = 291 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 17/268 (6%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + + G A F A ++DV LP + SA L+ +G+ L F + ++ +D Sbjct: 14 RLPGHQLLSLQGPDAAVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLADDH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117 +L + D++ +L + R V + ++ ++ S ++ Sbjct: 74 LMLVLADGDADAIASQLQRFVFRRKVKVLVRDDLAAAGAFTAPEAASGAAIAQAAGDGWE 133 Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 R G A+ + + + +G+ + P Sbjct: 134 LDLGSDALPRTLRIGAADAFAAGSETDEAAFALAWRQADLRYGLPRL-EEGQREVWTPQQ 192 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 +D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAAPAQAGDGVQQDGAALGT 251 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257 + V G ALA+ ++ D ++ G A+ Sbjct: 252 IACVAGDLALAVLPLEAGDADLQVGDAI 279 >gi|229521298|ref|ZP_04410718.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TM 11079-80] gi|229341830|gb|EEO06832.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TM 11079-80] Length = 339 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 97/272 (35%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 217 EHIPQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304 >gi|258626739|ref|ZP_05721561.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580995|gb|EEW05922.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 323 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 30/288 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEGQQVTFGAHCDAKGKVWSVFRLFHHN- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113 D + + +S + + +L Y + S V I + + +Q + + +S Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 141 Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163 R S LL T E+ + + + + I + T + Sbjct: 142 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLCVEQALWTCMDIEEAVP-VVTQNAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S + Sbjct: 201 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 260 Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263 + +G G+ +AI I + + +++G+ L + Sbjct: 261 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 307 >gi|300815649|ref|ZP_07095873.1| folate-binding protein YgfZ [Escherichia coli MS 107-1] gi|300820703|ref|ZP_07100854.1| folate-binding protein YgfZ [Escherichia coli MS 119-7] gi|300906551|ref|ZP_07124242.1| folate-binding protein YgfZ [Escherichia coli MS 84-1] gi|300925120|ref|ZP_07141034.1| folate-binding protein YgfZ [Escherichia coli MS 182-1] gi|300928165|ref|ZP_07143707.1| folate-binding protein YgfZ [Escherichia coli MS 187-1] gi|300947622|ref|ZP_07161793.1| folate-binding protein YgfZ [Escherichia coli MS 116-1] gi|300954261|ref|ZP_07166724.1| folate-binding protein YgfZ [Escherichia coli MS 175-1] gi|301303057|ref|ZP_07209184.1| folate-binding protein YgfZ [Escherichia coli MS 124-1] gi|301327300|ref|ZP_07220556.1| folate-binding protein YgfZ [Escherichia coli MS 78-1] gi|301643751|ref|ZP_07243789.1| folate-binding protein YgfZ [Escherichia coli MS 146-1] gi|309793971|ref|ZP_07688396.1| folate-binding protein YgfZ [Escherichia coli MS 145-7] gi|281602231|gb|ADA75215.1| tRNA-modifying protein ygfZ [Shigella flexneri 2002017] gi|300318722|gb|EFJ68506.1| folate-binding protein YgfZ [Escherichia coli MS 175-1] gi|300401590|gb|EFJ85128.1| folate-binding protein YgfZ [Escherichia coli MS 84-1] gi|300418722|gb|EFK02033.1| folate-binding protein YgfZ [Escherichia coli MS 182-1] gi|300452797|gb|EFK16417.1| folate-binding protein YgfZ [Escherichia coli MS 116-1] gi|300463805|gb|EFK27298.1| folate-binding protein YgfZ [Escherichia coli MS 187-1] gi|300526967|gb|EFK48036.1| folate-binding protein YgfZ [Escherichia coli MS 119-7] gi|300531578|gb|EFK52640.1| folate-binding protein YgfZ [Escherichia coli MS 107-1] gi|300841721|gb|EFK69481.1| folate-binding protein YgfZ [Escherichia coli MS 124-1] gi|300846163|gb|EFK73923.1| folate-binding protein YgfZ [Escherichia coli MS 78-1] gi|301077850|gb|EFK92656.1| folate-binding protein YgfZ [Escherichia coli MS 146-1] gi|308122378|gb|EFO59640.1| folate-binding protein YgfZ [Escherichia coli MS 145-7] gi|315256782|gb|EFU36750.1| folate-binding protein YgfZ [Escherichia coli MS 85-1] Length = 305 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|283788444|ref|YP_003368309.1| tRNA-modifying protein [Citrobacter rodentium ICC168] gi|282951898|emb|CBG91616.1| tRNA-modifying protein [Citrobacter rodentium ICC168] Length = 326 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV L + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYIQGQVTADVSQLTEQQHVLAAHCDAKGKMWSPLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 E +E RS R+S + +L Y + S V+I ++ Sbjct: 79 GEGFAWIE-RRSLRESQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFGELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 ++ + T + ERF + A+ L + G E ++ + + L I Sbjct: 138 DAEKPVTRDGATTVLWFAHPAERFLLVTDAATAETLCEKLRGEAE--LNNSQQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 196 AGIPVIDA-ANSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGK 254 Query: 211 DD-LPPSGSPI 220 +P +G + Sbjct: 255 ASRVPEAGEDL 265 >gi|27364925|ref|NP_760453.1| putative aminomethyltransferase [Vibrio vulnificus CMCP6] gi|81448625|sp|Q8DC85|YGFZ_VIBVU RecName: Full=tRNA-modifying protein ygfZ gi|27361071|gb|AAO09980.1| Predicted aminomethyltransferase [Vibrio vulnificus CMCP6] Length = 324 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLETDQVTWGGHCDAKGKLWSVFRLFHYADGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH-------------TF 110 +L+ D+S D + +L Y + + V I + + GV ++ TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144 Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + + + +R+ + A+ D + I F + Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPA-FAQNE 203 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ ++GT + I + Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGTIAPSAPETTISL-E 262 Query: 225 IEIG 228 +G Sbjct: 263 RSVG 266 >gi|117619784|ref|YP_855333.1| chain A, Ygfz protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561191|gb|ABK38139.1| chain A, Ygfz Protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 301 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 83/232 (35%), Gaps = 15/232 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L++ + + G+ +LQ +T DV L P+GK+ F + + Sbjct: 11 TLFPLTDLAITSLSGQDRAKYLQGQVTCDVNALQPGQHTLGGHCDPKGKLWSDFRLLCLS 70 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------QEHT 109 D ++ S + +L + + + V I V ++ QE Sbjct: 71 -DRLLMLTKPSVLARQLPELKKFAIFAKVEISENHGQAVGVAGQGTDGWIAGQYGLQESG 129 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + +L+ + + L I GI P Sbjct: 130 LIEGGMAVRVEADRWLLVSEQPLALSLPSGPESLWWGLEIKAGIPHLEA-VHQGEYIPQM 188 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPI 220 + L+GIS TKGCY+GQE V+R ++R + +++GT P SG + Sbjct: 189 LNLQALDGISFTKGCYMGQETVARAKYRGANNRALFVLSGTATTPVASGDTL 240 >gi|313500349|gb|ADR61715.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 313 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQE 107 ++L + D+ + L Y + S + + G+ + Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLFVPAAAG 126 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 T + I S V L E + + + +I GI Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPAADAEPVHQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHA 250 + I + +G + + G + LA+ + V+ Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGTGCELLAVLSAEAVEDG 284 >gi|301027408|ref|ZP_07190745.1| folate-binding protein YgfZ [Escherichia coli MS 69-1] gi|300394916|gb|EFJ78454.1| folate-binding protein YgfZ [Escherichia coli MS 69-1] Length = 295 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+S + +L Y + S VII ++ Sbjct: 63 WIE-RRSVRESQLTELKKYAVFSKVIIAPDDERVLLGVAGFQARAALANIFSELPSKEKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|327484963|gb|AEA79370.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Vibrio cholerae LMA3894-4] Length = 323 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDESVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|163749105|ref|ZP_02156355.1| hypothetical protein KT99_19729 [Shewanella benthica KT99] gi|161331175|gb|EDQ02064.1| hypothetical protein KT99_19729 [Shewanella benthica KT99] Length = 297 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 107/299 (35%), Gaps = 48/299 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G+ F+ +T D+ +L R A P+GK+L F + ED I+ + Sbjct: 1 MSVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAL-EDALIMMMPS 59 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----- 126 + +L Y + S + ++L E ++++ERF AD Sbjct: 60 DTLALDLTQLAKYAVFSKADLVDVTDKFLLLGVAGEQA---QAWVNERFGPADNTSIDKE 116 Query: 127 ------------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 + D + L I G + Sbjct: 117 VTVIAGGLLLKDNDRFIIVMDKEAAAPLLTSINQEIVDATAWQALEIQSGYPNLAASH-Q 175 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSP 219 S P + +NGIS KGCY+GQE ++R+++R ++ I++GT + Sbjct: 176 SKFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGTSSETVSLETRLE 235 Query: 220 ILTDD--IEIGTL--GVVVGKKAL--AIARIDKVDHAI-----KKGMALTVHGVRVKAS 267 + DD + GT+ V G + L A+ D D A + +LT+ + Sbjct: 236 LALDDGFKKTGTIIELVQSGDQVLLTAVLPNDTADSAKLRIAGDETSSLTIKPLPYSLE 294 >gi|331674383|ref|ZP_08375143.1| tRNA-modifying protein YgfZ [Escherichia coli TA280] gi|331068477|gb|EGI39872.1| tRNA-modifying protein YgfZ [Escherichia coli TA280] Length = 326 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVRKPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGN 254 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + ++++G G LA +++ Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287 >gi|88797936|ref|ZP_01113523.1| hypothetical protein MED297_00830 [Reinekea sp. MED297] gi|88779133|gb|EAR10321.1| hypothetical protein MED297_00830 [Reinekea sp. MED297] Length = 280 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 39/290 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLY--FLIS 58 + LS+ S I++ G + FLQ T D+ L +G+++ ++ Sbjct: 4 LQHCQLSHLSAIQLSGSDTLNFLQGQSTQDIKRLALNTPVAGGFCNVKGRLISTVQMVLV 63 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQ-----------------PINGV 100 E +L +R+ ++L L Y L + + Q Sbjct: 64 SQEPTQVLLIGERTGLEALSAHLKKYAPLFRKMTFDDQLDRLQFFGGYQQDKQTSGETVT 123 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 V+ W Q +I E+ D T I S Y ++ +D Sbjct: 124 VVPWGQNRVL----YITEQPDATDFPPTETL-----IPSSEWAYQDVLDQILWLDGTQ-- 172 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 + P + +D L+G+S KGCY GQEVV+R+ ++ +KR +T T D P + + Sbjct: 173 -SAAWIPQNVSLDALDGVSFKKGCYTGQEVVARLHYKGQSKKRLFRLTFTADQSPDETDV 231 Query: 221 LTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G + ALA+ + DK A+ G V V+ Sbjct: 232 FAGTTRVGEVIQTAVHNGQGAALAVLKTDKTGEAMTLGEN---RQVPVEL 278 >gi|297581095|ref|ZP_06943020.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534921|gb|EFH73757.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 323 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S S S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDSVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPKRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|171463581|ref|YP_001797694.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193119|gb|ACB44080.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 335 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 95/268 (35%), Gaps = 37/268 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI----------ARGSAILTPQGKIL 52 + L+ I + G A FLQ +T VL L R +P+G++L Sbjct: 19 ACNLAEWGLIIIEGPDAASFLQNQLTNSVLGLTLTQLGSVAQGFSSTRLVGYCSPKGRLL 78 Query: 53 LYFLI-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQ 106 I D + L I + S +L + LRS V I++ V + Sbjct: 79 ASAWIGLFSSVDSSHDRYALFISKDIAASTAKRLSMFVLRSKVKVIDLSDSWTVAGVYGP 138 Query: 107 EHTFSNSSFIDE----RFS---IADVLLHRTWGHNEKIASD--------IKTYHELRINH 151 + ++S+F D+ R + LL R + ++EL + Sbjct: 139 NNQITSSNFNDQSMALRLPDVLVGSNLLARIVMAYPNQDQADTPESREILDAWNELEVLS 198 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-- 209 I P + + G+ KGCY GQE+V+R Q+R I++R + Sbjct: 199 AIPRIVA-ATQEQFVPQMINFESVTGVDFKKGCYPGQEIVARSQYRGSIKRRLQLAHVIG 257 Query: 210 ---TDDLPPSGSPILTDDIEIGTLGVVV 234 + L G+ + G+VV Sbjct: 258 NHEDNKLTLPGAELFHSADSGQPAGMVV 285 >gi|82778336|ref|YP_404685.1| putative global regulator [Shigella dysenteriae Sd197] gi|118577996|sp|Q32BW1|YGFZ_SHIDS RecName: Full=tRNA-modifying protein ygfZ gi|81242484|gb|ABB63194.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 326 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 35/251 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLQAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105 + +E RS R+ + +L Y + S V I ++ Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137 Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 T ERF + A++L + G E ++ + + L I Sbjct: 138 SKEKQVVREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE+V+R + R ++ ++ G+ Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254 Query: 211 DD-LPPSGSPI 220 LP +G + Sbjct: 255 ASRLPEAGEDL 265 >gi|315289438|gb|EFU48833.1| folate-binding protein YgfZ [Escherichia coli MS 110-3] gi|315295687|gb|EFU55007.1| folate-binding protein YgfZ [Escherichia coli MS 16-3] Length = 305 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|229514097|ref|ZP_04403559.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TMA 21] gi|229349278|gb|EEO14235.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae TMA 21] Length = 339 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 39 LTHLTGWGAITLVGTDKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNTWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304 >gi|183179722|ref|ZP_02957933.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|183013133|gb|EDT88433.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 323 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSDTTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|153214509|ref|ZP_01949418.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153826896|ref|ZP_01979563.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|254291672|ref|ZP_04962460.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|124115311|gb|EAY34131.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|149739259|gb|EDM53521.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422444|gb|EDN14403.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 323 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|15642468|ref|NP_232101.1| hypothetical protein VC2472 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590986|ref|ZP_01678305.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|227082593|ref|YP_002811144.1| hypothetical protein VCM66_2395 [Vibrio cholerae M66-2] gi|254849597|ref|ZP_05238947.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10] gi|255746858|ref|ZP_05420803.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera CIRS 101] gi|262162023|ref|ZP_06031039.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1] gi|298500172|ref|ZP_07009977.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|81544421|sp|Q9KPA1|YGFZ_VIBCH RecName: Full=tRNA-modifying protein ygfZ gi|254814152|sp|C3LR15|YGFZ_VIBCM RecName: Full=tRNA-modifying protein ygfZ gi|9657051|gb|AAF95614.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547163|gb|EAX57292.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|227010481|gb|ACP06693.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|254845302|gb|EET23716.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10] gi|255735260|gb|EET90660.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera CIRS 101] gi|262028272|gb|EEY46929.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1] gi|297540865|gb|EFH76919.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 323 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|118577999|sp|Q7MHM7|YGFZ_VIBVY RecName: Full=tRNA-modifying protein ygfZ Length = 324 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-------------HTF 110 +L+ D+S D + +L Y + + V I + + GV ++ TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 144 Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + + + +R+ + A+ D + I F + Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPA-FAQNE 203 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I + Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIEPSAPETTISL-E 262 Query: 225 IEIG 228 +G Sbjct: 263 RSVG 266 >gi|253687038|ref|YP_003016228.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259710252|sp|C6D8Y4|YGFZ_PECCP RecName: Full=tRNA-modifying protein ygfZ gi|251753616|gb|ACT11692.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 333 Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + G + +LQ +TADV L A +GK+ + Sbjct: 26 TLISLDDWALATMVGPDTVKYLQGQVTADVSALADDRHILCAHCDAKGKMWSNLRLFHHG 85 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101 E +E R+ RD+ + +L Y + S I ++ Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAVLLGAAGAGIRELLASAFSQLPD 144 Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + ++ T + + ERF L G + +D + + L I G Sbjct: 145 ADHPVVQHEGATLLHFAHPAERFLLVLSPEQSASLLEQLGDKVSL-NDSRQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211 ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G + Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262 Query: 212 DLPPSGSPI 220 +P +G + Sbjct: 263 QVPQAGDDL 271 >gi|262190699|ref|ZP_06048930.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93] gi|262033411|gb|EEY51918.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93] Length = 323 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLAGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTYYRFTDSIAIGL 288 >gi|212213082|ref|YP_002304018.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212] gi|212011492|gb|ACJ18873.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212] Length = 258 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 33/227 (14%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 FI V G++A FLQ +T DV + A P+G+++ F + + +D + L Sbjct: 11 FGFILVKGENAATFLQGQLTCDVREINEIRGTLGACCDPKGRMVANFFVFQKNKDYYFL- 69 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + +S I L Y + S V + L+ N+ T +S+ ++ L Sbjct: 70 LPKSMISITIAHLKKYAVFSKVEL---------LAVNEAET----------YSLPEITLK 110 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 D + L + G+V + P + GI+ TKGCYIGQ Sbjct: 111 EL---------DENDWRSLNVRAGLV-WVYPQTSGKLIPQMINLQKWGGINFTKGCYIGQ 160 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 E+++R +H +++ + PP G + + T+G+VV Sbjct: 161 EIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND--QTMGIVV 205 >gi|289628133|ref|ZP_06461087.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649901|ref|ZP_06481244.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. 2250] gi|330871252|gb|EGH05961.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 315 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q + ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128 Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158 + + R S L G + + S + + +I GI Sbjct: 129 AVVRANELIAIRVSPGRAELWVLAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304 >gi|259909560|ref|YP_002649916.1| putative global regulator [Erwinia pyrifoliae Ep1/96] gi|224965182|emb|CAX56714.1| putative global regulator [Erwinia pyrifoliae Ep1/96] gi|283479638|emb|CAY75554.1| tRNA-modifying protein ygfZ [Erwinia pyrifoliae DSM 12163] Length = 328 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 35/277 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G I +LQ +T DV LP +A +GK+ + Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPPNQHSPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS D+ + +L Y + + + + + ++ Sbjct: 79 ADGLAYIE-RRSLLDNQLSELKKYAVFAKISLTADDESVLLGVAGFQARAALANLFSTLP 137 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRINH 151 + T S ERF + + G + +A +D + L I Sbjct: 138 DAASPVVQQDNSTLLWFSLPAERFLLV-TTAEKAAGIADTLAGEARFNDSAQWRALDIEA 196 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + + P + L IS KGCY GQE+V+R + R ++ + G Sbjct: 197 GLPIIDA-ATSAQFIPQATNLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKA 255 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + P + L ++++G G LA ++D D Sbjct: 256 GVVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289 >gi|206575880|ref|YP_002236645.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342] gi|226730801|sp|B5XUE6|YGFZ_KLEP3 RecName: Full=tRNA-modifying protein ygfZ gi|206564938|gb|ACI06714.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342] Length = 327 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 91/249 (36%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ ITADV L +A +GK+ + + Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS RD + +L Y + S V I ++ Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137 Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152 + + ERF + + E ++ + + L I G Sbjct: 138 DAATPVVSEDATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ P + L GIS KGCY GQE+V+R + R ++ ++GT Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256 Query: 213 -LPPSGSPI 220 +P +G + Sbjct: 257 RVPEAGEDL 265 >gi|320327157|gb|EFW83171.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. race 4] gi|330879268|gb|EGH13417.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. race 4] Length = 315 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q + ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDSDSALVGLGLDLAQETD 128 Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158 + + R S L G + + S + + +I GI Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304 >gi|153831095|ref|ZP_01983762.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873416|gb|EDL71551.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 323 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 97/272 (35%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLMNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288 >gi|121729911|ref|ZP_01682336.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147675445|ref|YP_001217973.1| hypothetical protein VC0395_A2049 [Vibrio cholerae O395] gi|262167302|ref|ZP_06035012.1| glycine cleavage T-protein [Vibrio cholerae RC27] gi|172047576|sp|A5F5F3|YGFZ_VIBC3 RecName: Full=tRNA-modifying protein ygfZ gi|121628354|gb|EAX60858.1| conserved hypothetical protein [Vibrio cholerae V52] gi|146317328|gb|ABQ21867.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227014364|gb|ACP10574.1| conserved hypothetical protein [Vibrio cholerae O395] gi|262024277|gb|EEY42968.1| glycine cleavage T-protein [Vibrio cholerae RC27] Length = 323 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTGWGAITLVGTDKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120 D + + +S + + +L Y + S V I GV+ S + S + Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 IA R + + + + + I + T + Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 + +G G A+ + +I G+ Sbjct: 261 ERAVGENWRSAG----ALLTYYRFTDSIAIGL 288 >gi|290511312|ref|ZP_06550681.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55] gi|289776305|gb|EFD84304.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55] Length = 327 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ ITADV L +A +GK+ + + Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------ 96 + +E RS RD + +L Y + S V I Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152 + + ERF + + E ++ + + L I G Sbjct: 138 DAAAPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ P + L GIS KGCY GQE+V+R + R ++ ++GT Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256 Query: 213 -LPPSGSPI 220 +P +G + Sbjct: 257 RVPEAGEDL 265 >gi|29653776|ref|NP_819468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 493] gi|153209655|ref|ZP_01947468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii 'MSU Goat Q177'] gi|154707625|ref|YP_001424980.1| aminomethyltransferase family protein [Coxiella burnetii Dugway 5J108-111] gi|161830229|ref|YP_001596362.1| glycine cleavage T-protein [Coxiella burnetii RSA 331] gi|165924115|ref|ZP_02219947.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 334] gi|212218958|ref|YP_002305745.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154] gi|29541039|gb|AAO89982.1| aminomethyltransferase family protein [Coxiella burnetii RSA 493] gi|120575283|gb|EAX31907.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356911|gb|ABS78373.1| aminomethyltransferase family protein [Coxiella burnetii Dugway 5J108-111] gi|161762096|gb|ABX77738.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 331] gi|165916438|gb|EDR35042.1| glycine cleavage T-protein (aminomethyl transferase) domain protein [Coxiella burnetii RSA 334] gi|212013220|gb|ACJ20600.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154] Length = 258 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 33/227 (14%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 FI V G++A FLQ +T DV + A P+G+++ F + + +D + L Sbjct: 11 FGFILVKGENAATFLQGQLTCDVREINEIRGALGACCDPKGRMVANFFVFQKNKDYYFL- 69 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + +S I L Y + S V + L+ N+ T +S+ ++ L Sbjct: 70 LPKSMISITIAHLKKYAVFSKVEL---------LAVNEAET----------YSLPEITLK 110 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 D + L + G+V + P + GIS TKGCYIGQ Sbjct: 111 EL---------DENDWRSLNVRAGLV-WVYPQTSGKLIPQMINLQKWGGISFTKGCYIGQ 160 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 E+++R +H +++ + PP G + + T+G+VV Sbjct: 161 EIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND--QTMGIVV 205 >gi|288933622|ref|YP_003437681.1| folate-binding protein YgfZ [Klebsiella variicola At-22] gi|288888351|gb|ADC56669.1| folate-binding protein YgfZ [Klebsiella variicola At-22] Length = 327 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 31/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + +LQ ITADV L +A +GK+ + + Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------ 96 + +E RS RD + +L Y + S V I Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152 + + ERF + + E ++ + + L I G Sbjct: 138 DAAAPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ P + L GIS KGCY GQE+V+R + R ++ ++GT Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256 Query: 213 -LPPSGSPI 220 +P +G + Sbjct: 257 RVPEAGEDL 265 >gi|229588983|ref|YP_002871102.1| hypothetical protein PFLU1454 [Pseudomonas fluorescens SBW25] gi|229360849|emb|CAY47707.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 313 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 107/293 (36%), Gaps = 34/293 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L A A T +G++ F I ++ D Sbjct: 8 CPLSHEGVLAVRGADAAKFLQGQLTCNLNYLSDTQASLGARCTQKGRMQSSFRIL-LQGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 +L + + + L Y + S + + V + Sbjct: 67 GVLLAMATELLEPQLADLKKYAVFSKSKLTDESAAWVRFGLANADQALSGLGLELPAETD 126 Query: 114 ------SFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 + I R S L H + + +D+ + +I GI Sbjct: 127 SVARTDALIAVRVSPGRAELWAPAEHADTVRSQLTERLQQADLNEWLLGQIRAGIGQVMP 186 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R ++ ++P G Sbjct: 187 Q-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLSLNATEMPAPG 245 Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVRV 264 +P+ + + IG + + LA+ + + D L G+++ Sbjct: 246 TPLFSPSHNSAIGEVVIAAKADQSVELLAVLQAEAADSGDVHLGNLEGPGLQL 298 >gi|21231578|ref|NP_637495.1| hypothetical protein XCC2133 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768300|ref|YP_243062.1| hypothetical protein XC_1980 [Xanthomonas campestris pv. campestris str. 8004] gi|188991439|ref|YP_001903449.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris str. B100] gi|21113265|gb|AAM41419.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573632|gb|AAY49042.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733199|emb|CAP51397.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris] Length = 290 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 106/273 (38%), Gaps = 16/273 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + E+ Sbjct: 14 SLHDMQYVRLSGPDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLRDEDAQ 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV---IIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 ++ + + +L + R + I + + ++ + Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVFRRKLRITEIALTAQGAFAAPARAQAAHADVAADAIELD 133 Query: 122 IADVLLHRT--WGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + L RT ++ +A+ I + + G+V D P +D Sbjct: 134 MGSPALPRTLVLRASDTLAAPIDLPNMDAAWRRADLQLGLVRLP-DTQREQWTPQQLALD 192 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L+ S+ KGCY GQE+V+R ++ ++ TD G + D E+G++ Sbjct: 193 QLHAFSVKKGCYPGQEIVARTHFLGKAKRAVHLLE-TDAAVAPGDAVRLDGAEVGSVVSC 251 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 ALA+ ++ AI+ GM L+ + Sbjct: 252 AENVALAVLPLEL---AIEAGMTLSAGTSPARP 281 >gi|170720249|ref|YP_001747937.1| hypothetical protein PputW619_1063 [Pseudomonas putida W619] gi|169758252|gb|ACA71568.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 313 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 35/297 (11%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 9 PLSHEGILAVRGSDAGKFLQGQLTCNINYLSPEQASLGARCMVKGRMQSSFRILP-EGNG 67 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------SNSSFI 116 ++L + R ++ + L Y + S + + S+ Sbjct: 68 YLLAMARELLEAQLADLKKYAVFSKATLSDESAAWARFGLQGGDAALRALGLKVPTSAGA 127 Query: 117 DERFS-----IADVLLHRTWGHNEKIAS------------DIKTYHELRINHGIVDPNTD 159 ER W + AS + + +I GI Sbjct: 128 TERHEGLIAVAVSEGRVELWVPADAAASVREKLATALPEGPLNDWLLGQIRAGIGQ-VMG 186 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGS 218 P + L+G+S KGCY GQE+V+R+Q+ +++R + D+P G+ Sbjct: 187 PTRELFIPQMINLQALDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLLLDQQDIPAPGA 246 Query: 219 PILTD--DIEIGTL----GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 I + +G + + LA+ + V+ +L +RV S P Sbjct: 247 QIFSPTHGSSVGEVVIAATTGQSCELLAVLGAEAVEDDNLHLGSLQGPRLRVS-SLP 302 >gi|327479782|gb|AEA83092.1| aminomethyltransferase [Pseudomonas stutzeri DSM 4166] Length = 315 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 100/281 (35%), Gaps = 36/281 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A TP+G++ F I E D Sbjct: 8 CVLSHEGVLAVRGPDASKFLQGQLTCNLNYLDAHTSSLGARCTPKGRMQSSFRIVP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWN------QE 107 ++L + + L Y + S I +G ++S + Sbjct: 67 GYLLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIADGDGSLVSLGLDLSQAAD 126 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGIVDPNT 158 + I R L E++ + + + ++ GI Sbjct: 127 SIVRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWLLDQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPP 215 P + L G+S KGCY GQE+V+R+Q+ +++R + +LP Sbjct: 186 GSTRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLQHLAVEGEPGELPA 245 Query: 216 SGSPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250 G + + + +G + G + LA+ + D Sbjct: 246 PGVELFSPVHNSSVGEVVLAATSADGIELLAVVQEDAAADG 286 >gi|261820171|ref|YP_003258277.1| global regulator [Pectobacterium wasabiae WPP163] gi|261604184|gb|ACX86670.1| folate-binding protein YgfZ [Pectobacterium wasabiae WPP163] Length = 333 Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 35/250 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + G + +LQ +TADV L A +GK+ + Sbjct: 26 TLISLDDWALATLVGPDTVKYLQGQVTADVGALADDRHILCAHCDAKGKMWSNLRLFHHG 85 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101 E +E R+ RD+ + +L Y + S I ++ Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDSAVLLGAAGAGIREQLASVFNQLPD 144 Query: 102 ----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + ++ T + + ERF LL + ++ +D + + L I Sbjct: 145 AEHPVVQHEGATLLHFTHPAERFLLVLSSEQNAALLEQL--DDKVSLNDSRQWLTLDIEA 202 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G Sbjct: 203 GQPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261 Query: 212 D-LPPSGSPI 220 + +P +G + Sbjct: 262 NRVPQAGDDL 271 >gi|71275603|ref|ZP_00651888.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Dixon] gi|71899500|ref|ZP_00681657.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|170729587|ref|YP_001775020.1| hypothetical protein Xfasm12_0376 [Xylella fastidiosa M12] gi|71163494|gb|EAO13211.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Dixon] gi|71730720|gb|EAO32794.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella fastidiosa Ann-1] gi|167964380|gb|ACA11390.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 267 Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 18/269 (6%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +++ G + F A ++D L SA LTP+G++ F + + E+ +L + Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ--------PINGVVLSWNQEHTFSNSSFIDERFSI 122 + + +L Y R V I ++ V + Q F + +D Sbjct: 61 DGEAVMMAPQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQFDGITELDVSGIT 120 Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +LL ++ + + + G+ + P +D LN S+ Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIGLDWLNAYSI 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY GQE+V+R ++R ++ + P G + + + +IG + V ALA Sbjct: 180 RKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSTEGDIGQVASVAEGLALA 238 Query: 241 IARID------KVDHAIKKGMALTVHGVR 263 + ID +V + + R Sbjct: 239 VLPIDTEYGELRVAGTLATPLPFVAGLAR 267 >gi|300936035|ref|ZP_07150983.1| folate-binding protein YgfZ [Escherichia coli MS 21-1] gi|300458827|gb|EFK22320.1| folate-binding protein YgfZ [Escherichia coli MS 21-1] Length = 305 Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121 Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDAANSRQ-FIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 +G + ++++G G LA +++ Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266 >gi|257486552|ref|ZP_05640593.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330989043|gb|EGH87146.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010035|gb|EGH90091.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 315 Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q + ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128 Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158 + + R S L G + + S + + +I GI Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304 >gi|330446930|ref|ZP_08310581.1| folate-dependent regulatory protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491121|dbj|GAA05078.1| folate-dependent regulatory protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 327 Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 31/253 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + + + G + +LQ +T DV++L + +A +GK+ + I Sbjct: 24 LALSKLDDWGMVTLIGPDSKAYLQGQLTCDVVSLEAGKSTLAAHCDAKGKMRTVMRLFHI 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118 E L+ +S + I +L Y + S I + LS Q N+ F DE Sbjct: 84 ENGYGYLQ-RQSVMATQIPELKKYAVFSKTDITPSDNIVLGLSGEQAQAAINAYFTEGDE 142 Query: 119 ----------RFSIADVLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157 + + + H E IA SD + IN + D Sbjct: 143 VRHNEIATAVKVDAQRWFIIASPEHAETIAQHFAADATFSDSTLWDLYDINAALPRVDSA 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216 T+ P + +NGIS KGCY GQE V+R ++R I ++ I+TG P + Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPQA 259 Query: 217 GSPILTDDIEIGT 229 G + + +G Sbjct: 260 GDAL---ERSVGE 269 >gi|307579370|gb|ADN63339.1| putative aminomethyl transferase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 267 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 104/266 (39%), Gaps = 18/266 (6%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +++ G + F A ++D L SA LTP+G++ F + + E+ +L + Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID--ERFSIADVL 126 + + +L Y R V I ++ +++ T + ++ +D ++ + Sbjct: 61 DGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELDVSGIT 120 Query: 127 LHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 L R ++ + + + G+ + P +D LN S+ Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIGLDGLNAYSI 179 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY GQE+V+R ++R ++ + P G + + + +IG + V ALA Sbjct: 180 RKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVAEGLALA 238 Query: 241 IARID------KVDHAIKKGMALTVH 260 + ID +V + + Sbjct: 239 VLPIDTEYGELRVAGTLATPLPFVAG 264 >gi|298488667|ref|ZP_07006696.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156740|gb|EFH97831.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 313 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 37/295 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPIN----GVVLSWNQEHT 109 +L + + + L Y + S V +Q + G+ L+ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLAQETDAV 128 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDF 160 + I R S L G + + S + + +I GI Sbjct: 129 VRANELIAIRASPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VFGS 187 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSP 219 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G+ Sbjct: 188 TREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPGTA 247 Query: 220 ILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 LFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 302 >gi|330808065|ref|YP_004352527.1| hypothetical protein PSEBR_a1335 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376173|gb|AEA67523.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 313 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L A A T +G++ F I +E D Sbjct: 8 CTLSHEGVLAVRGVDAGKFLQGQLTCNLDYLSDSRASLGARCTQKGRMQSSFRIL-LESD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQE------ 107 ++ + + + L Y + S V ++ + + E Sbjct: 67 GVLMAMAAELLEPQLADLKKYAVFSKSKLTDESSAWVRFGLENADKALAGLGLELPDDTD 126 Query: 108 HTFSNSSFIDERFSIADVLLH---------RTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + + I R S L RT E +D+ + ++ GI Sbjct: 127 SVARHEALIAIRVSPGRAELWAPAEQAQTLRTRLGTELAEADLNPWLLGQVRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + +LP G Sbjct: 186 PATRELFIPQMLNLQAIGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLQLDASELPEPG 245 Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250 + + + IG + + + LA+ + + + Sbjct: 246 TALFSPTHGSSIGEVVIAARGEGNIELLAVLQAEAAEDD 284 >gi|311278182|ref|YP_003940413.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1] gi|308747377|gb|ADO47129.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1] Length = 327 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 38/277 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G+ + +LQ +TADV L A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGQDSEKYLQGQVTADVAQLTEHQHLLVAHCDAKGKMWSNLRLFRQ 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFID 117 +E +E RS RD+ + +L Y + S V I + + + GV + + S + Sbjct: 79 QEGFAWIE-RRSVRDAQLTELKKYAVFSKVAIAPNDDRVLLGVAGFQARAALANLFSQLP 137 Query: 118 ER----------------FSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152 +R LL + E++A + + + L I G Sbjct: 138 DRDMPAVTENDSTLLWFEHPAERFLLIVSADAAERVADALRGEAQRNNSQQWLALNIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P + L GIS KGCY GQE+V+R + R ++ + G Sbjct: 198 LPVIDP-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGAAH 256 Query: 213 -LPPSGSPILTDDIEIG----TLGVVVGKKALAIARI 244 +P +G + ++++G G V+ AL R+ Sbjct: 257 RVPEAGEEL---ELKMGDNWRRTGSVLAAVALDDGRL 290 >gi|325275456|ref|ZP_08141386.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51] gi|324099407|gb|EGB97323.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51] Length = 313 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 100/278 (35%), Gaps = 32/278 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A A +G++ F I E + Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHAGLGARCMVKGRMQSSFRILP-EGN 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 ++L + ++ + L Y + S + + + ID + Sbjct: 67 GYLLAMASELLEAQLADLKKYAVFSKATLTDESSAWARFGLQGGEAALQALGIDLPSAAG 126 Query: 124 DVLLHRTWGHNEKIASDIKTYHELR--------INHGIVDPNT-DFLPSTI--------- 165 + A ++ + + + + + D+L + Sbjct: 127 STVRQAGLIAVTVSAGRVELWVAADNAEPVRQALAAALPEGSLNDWLLGQVRAGIGQVMG 186 Query: 166 ------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGS 218 P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G+ Sbjct: 187 PTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQAAVPAPGA 246 Query: 219 PILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250 I + +G + + A LA+ + V+ Sbjct: 247 EIFSPTHGSSVGEVVLAASNGAGCELLAVLSAEAVEDD 284 >gi|50119703|ref|YP_048870.1| putative global regulator [Pectobacterium atrosepticum SCRI1043] gi|81646141|sp|Q6D961|YGFZ_ERWCT RecName: Full=tRNA-modifying protein ygfZ gi|49610229|emb|CAG73672.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 333 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 93/249 (37%), Gaps = 33/249 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + G + +LQ +TADV LP A +GK+ + Sbjct: 26 TLISLDDWALATLVGPDTVKYLQGQVTADVGALPDNGHILCAHCDAKGKMWSNLRLFHHG 85 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PI 97 E +E R+ RD + +L Y + S I P Sbjct: 86 EGFAFIE-RRNLRDVQLSELKKYAVFSKTAIAPDDNTILLGAAGAGIRELLASVFSQLPD 144 Query: 98 NGVVLSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + ++ T + + ERF L G + +D + + L I G Sbjct: 145 AEHPVVQHEGATLLHFAHPAERFLLVLSPEPSASLLEQLGDKVSL-NDSRQWLTLDIEAG 203 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211 ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G + Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262 Query: 212 DLPPSGSPI 220 +P +G + Sbjct: 263 KVPQAGDDL 271 >gi|70728823|ref|YP_258572.1| aminomethyl transferase [Pseudomonas fluorescens Pf-5] gi|68343122|gb|AAY90728.1| aminomethyl transferase, putative [Pseudomonas fluorescens Pf-5] Length = 313 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 102/279 (36%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A +G++ F I +E D Sbjct: 8 CPLSHEGVLAVRGPDASKFLQGQLTCNLNYLSDSQSSLGARCNQKGRMQSSFRIL-LEGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-----DE 118 +L + R + + L Y + S + + + + + D Sbjct: 67 GCLLAMARELIEPQLADLKKYAVFSKAKLADESASWARFGLADAQVALSGLGLELPEEDG 126 Query: 119 RFSIADVLLH--------------------RTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + AD L+ R + ++ + ++ G+ Sbjct: 127 SVARADGLIALRVSSQRAELWVPAERAASLRQQLAAQLPEGELNQWLLGQVRAGLGQVMP 186 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSG 217 + P + + G+S KGCY GQE+V+R+Q+ +++R + D LP G Sbjct: 187 E-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLALPGDALPVPG 245 Query: 218 SPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250 + + + IG + G + LA+ + + V+ Sbjct: 246 TALFAPSHNSAIGEVVLAARAQQGVELLAVLQAEAVEGG 284 >gi|309785295|ref|ZP_07679926.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617] gi|308926415|gb|EFP71891.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617] Length = 305 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 90/246 (36%), Gaps = 35/246 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G + ++Q +TADV + +A +GK+ + + + Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLQAAHCDAKGKMWSNLRLFRDGDGFA 62 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------------- 105 +E RS R+ + +L Y + S V I ++ Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121 Query: 106 ----QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 T ERF + A++L + G E ++ + + L I G Sbjct: 122 VVREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214 + P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238 Query: 215 PSGSPI 220 +G + Sbjct: 239 EAGEDL 244 >gi|166712290|ref|ZP_02243497.1| hypothetical protein Xoryp_12755 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 290 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 14/276 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 14 SLHDIQYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FS 121 ++ + + +L + LR + I + E + + + + Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVLRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLD 133 Query: 122 IADVLLHRTWG--HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + L RT E +A+ I+ + + G+ + P +D Sbjct: 134 LGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALD 192 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSV 251 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 G ALA+ ++ A A HG R +A P Sbjct: 252 AGNLALAVLPLELTLDADTPLQA-GAHGARPRAIAP 286 >gi|262404784|ref|ZP_06081339.1| glycine cleavage T-protein [Vibrio sp. RC586] gi|262349816|gb|EEY98954.1| glycine cleavage T-protein [Vibrio sp. RC586] Length = 323 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 30/288 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLQDQQVTFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113 D + + S ++ + +L Y + S V I + + +Q + + + Sbjct: 82 DGYAMFQRCSAIEAELRELKKYAIFSKVTIAESSDIALGVMGSQANAWVDGLSEQTGDVR 141 Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163 R S LL T E+ + + + + + + T + Sbjct: 142 RIQGGTAVRMSEQRWLLLVTPEQAEQYVNTWQGLCVEQALWTRMDVEEAVP-VVTQSTQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS +KGCY GQE V+R ++R I ++ I+ G P S + Sbjct: 201 EHIPQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNITAPFSNEEPVIL 260 Query: 224 DIEIGTLGVVVG--------KKALAIARIDKVDHAIKKGMALTVHGVR 263 + +G G +AI I + + +++G L + Sbjct: 261 ERAVGEHWRSAGQLLTHYQFDDGIAIGLI-VLPNDLEEGAELRLASQP 307 >gi|299470070|emb|CBN79247.1| conserved unknown protein [Ectocarpus siliculosus] Length = 376 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 116/326 (35%), Gaps = 88/326 (26%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLISK 59 + L ++ +++ G A LQ ++T D+ L + +A L P+G+++ L+++ Sbjct: 6 AAVLEGRAVLEISGVDAKALLQGLMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTR 65 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNS 113 +K L YKLRS V I+ ++GV W Sbjct: 66 SPR-------HEAKGKPL------YKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGG 112 Query: 114 S--------------------FIDERFSIADVLLHRTWGHNEKIASDIKT---------Y 144 F D R + V L R +D Y Sbjct: 113 DVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGPDGADWPDGDPVVPEGRY 172 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 H LR+ +G+ + + P ++ +DLL IS TKGCY+GQE+ +R Q + +RKR Sbjct: 173 HALRMANGVGEGSELL---DSIPLESNLDLLGSISFTKGCYVGQELTARTQFKGFVRKRV 229 Query: 205 MIITGTDDL-----------------------------PPSGSPILTDDIEIGTLGVVVG 235 + + + P +GS ++ E G LG +V Sbjct: 230 LPVLFPEGAQTSFDPSAASDEGERQGLLLSRWGGVAAPPEAGSKVVDRAAEDGRLGALVS 289 Query: 236 -----KKALAIARIDKVDHAIKKGMA 256 LA+ R+ KV G Sbjct: 290 VSPEYNVGLAMLRLGKVLSPASGGTD 315 >gi|269140276|ref|YP_003296977.1| glycine cleavage T protein [Edwardsiella tarda EIB202] gi|267985937|gb|ACY85766.1| glycine cleavage T protein [Edwardsiella tarda EIB202] gi|304560103|gb|ADM42767.1| Folate-dependent protein [Edwardsiella tarda FL6-60] Length = 332 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 87/250 (34%), Gaps = 35/250 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I V G A +LQ +TADV L QGK+ + + Sbjct: 20 LTLMRLDDWLPINVSGPDAQSYLQGQLTADVPALAATQHTLCGHCDAQGKLWSSLRLLRR 79 Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + T++L RS +L Y + + V I V+L I R Sbjct: 80 GDGFTYLLR--RSVATLQTLELKKYAVFAKVSIA-SDEAAVLLGVAGAQASEALGAIFPR 136 Query: 120 FSIADV---------LLHRTWGHNEKI---------------------ASDIKTYHELRI 149 AD LL+ W + +D + L I Sbjct: 137 LPDADAPLLQDGRSHLLYLAWPQPRYLLICDDADEAERICTPLAVHARLADSAQWLALDI 196 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GI + P + L GIS +KGCY GQE+V+R ++R R+ + G Sbjct: 197 EAGIP-LIDEPSCDRFLPQAVNLQALGGISFSKGCYSGQEMVARAKYRGANRRALFWLRG 255 Query: 210 TDDLPPSGSP 219 + + P S Sbjct: 256 SAERLPHASE 265 >gi|84390094|ref|ZP_00991356.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01] gi|84376748|gb|EAP93623.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01] Length = 323 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 35/252 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITIIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109 + L +S + + ++ Y + S + IE Q ++ + + T Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKIDIEQTSDVVIGIMGTSANQYVDSIAEGQGKVRT 142 Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 S + + D R+++ A+ L+ + EK++ + YHE I+D + Sbjct: 143 ISGGTAVQVSDNRWALLVTEEAAESLV--SSSSAEKVSEALWQYHE------ILDAQPNL 194 Query: 161 ---LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + P + + GIS +KGCY GQE V+R ++R + ++ I++GT S Sbjct: 195 SKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTTSDVLSL 254 Query: 218 SPILTDDIEIGT 229 + + +G Sbjct: 255 ENTIELERSVGE 266 >gi|262273721|ref|ZP_06051534.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886] gi|262222136|gb|EEY73448.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886] Length = 326 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 35/273 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S + L + + I G+ IP+LQ +T D+++L + +A +GK+ I Sbjct: 24 LSVIALDHLALITAVGQDTIPYLQGQLTCDLVSLEKTRSTLAAHCDAKGKVWSAIRIFHH 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++ S + + ++ Y + S + + ++ + + S FI E Sbjct: 84 GNGVAYVQ-PASVAEKQLAEIKKYAVFSKTEFTLSEQVLIGIAGEKANNAVESRFIGEGD 142 Query: 121 --SIADVLLHRTWGHNEKIA-------------------SDIKTYHELRINHGIVDPNTD 159 R G+ +A SD + L + + D Sbjct: 143 VRPTQTGTAVRIDGNRWLLAIDKEEADTLITELGERATLSDNALWTLLDLRAALP-AIED 201 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + L+GIS KGCY GQE V+R ++R I ++ ++ G + P Sbjct: 202 ATTNEFIPQALNLQALDGISFKKGCYTGQETVARAKYRGINKRATYLLQGKAEDAPKAGD 261 Query: 220 ILTDDIEIG----TLGVVV------GKKALAIA 242 + D +G T G V+ +ALA+ Sbjct: 262 VF--DRSVGENWRTGGTVLTGYRFEDGQALALV 292 >gi|226294152|gb|EEH49572.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1192 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 70/282 (24%) Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTF------- 110 + +++E+D+++ +L+ L +KLRS + + + WN+E Sbjct: 871 TPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDADLLTEYDI 930 Query: 111 -------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYHELRINHGIVD 155 + D R L + E++ D TY+ RI HG+ + Sbjct: 931 ELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYNLRRILHGVPE 988 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---- 211 + + + P + MD++ I KGCY+GQE+ R HR ++RKR + + D Sbjct: 989 GQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILPVRFYDINDP 1048 Query: 212 ---------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDKVD---- 248 LPP+G+ I G VG LA+ R++ + Sbjct: 1049 MPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCRLEMMTDISF 1108 Query: 249 -----------------HAIKKGMALTVHGVRVKASFPHWYK 273 A +G ++VKA P W + Sbjct: 1109 TEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 1150 >gi|71735285|ref|YP_276095.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555838|gb|AAZ35049.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. phaseolicola 1448A] Length = 315 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E + Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGN 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q + ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128 Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158 + + R S L G + + S + + +I GI Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304 >gi|320155310|ref|YP_004187689.1| Fe/S cluster synthesis/repair in oxidative stress protein [Vibrio vulnificus MO6-24/O] gi|319930622|gb|ADV85486.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Vibrio vulnificus MO6-24/O] Length = 324 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N I + G +LQ +T DV++L +GK+ F + + Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYADGYA 85 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH-------------TF 110 +L+ D+S D + +L Y + + V I + + GV ++ TF Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144 Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + + + +R+ + A+ D + I F + Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPA-FAQNE 203 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I + Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIAPSTTETTISL-E 262 Query: 225 IEIG 228 +G Sbjct: 263 RSVG 266 >gi|226943486|ref|YP_002798559.1| ygfZ-like protein [Azotobacter vinelandii DJ] gi|226718413|gb|ACO77584.1| ygfZ-like protein [Azotobacter vinelandii DJ] Length = 315 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + A TP+G+++ F + + D Sbjct: 10 CPLRHEGVLAVRGPDADKFLQGQVTCNLDYLKDGSSSLGARCTPKGRMVSSFRLLP-DRD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----------------VLSWNQE 107 F+L + + +L + S + + VL Sbjct: 69 GFLLAMASELIEPQQTELKKFAAFSKSQLIDESGAWCRFGLLGDDAALAALDLVLPQEAG 128 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 N R L E + + ++++ +I GI Sbjct: 129 RVVRNGELAAIRLESGRAELWAPAEQAEALHTRLAGHLPEAPLESWLLAQIRAGIGQ-VY 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + + P G Sbjct: 188 GATRELFIPQMINLQAVGGVSFKKGCYSGQEIVARMQYLGKLKRRLYRLALPGAEAPAPG 247 Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250 + + + +G + + G + LA+ + D V+ Sbjct: 248 TELFSPVHRTSVGEVVLAAPAENGVELLAVLQEDAVEDG 286 >gi|260771932|ref|ZP_05880850.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14] gi|260613224|gb|EEX38425.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 23/245 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + I V G + P+LQ +T +V+ LP + A +GK+ F + D Sbjct: 24 TNLEQWAAIYVSGIDSKPYLQGQLTCNVVALPAQQMVYGAHCDAKGKVWSAFRLFH-HRD 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119 + + S D + +L Y + S V IE Q + + ++ + F D R Sbjct: 83 GYAMFQPASAVDVELRELKKYAIFSKVAIE-QSQDVALGLLGKQAELRLNQFNDCRDDVR 141 Query: 120 ----------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 I + + + + I + D + Sbjct: 142 VLEQGTAVKISAQRWLLLIKPDSVEALLESMPAQRVNSEIWTRFEIQEALPIVTQD-QQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + L GIS KGCY GQE V+R ++R I ++ ++ G P + + Sbjct: 201 EHIPQALNLQALGGISFNKGCYTGQETVARAKYRGINKRALCLVAGDIHQPLNADQSIEL 260 Query: 224 DIEIG 228 + +G Sbjct: 261 ERAVG 265 >gi|271499205|ref|YP_003332230.1| folate-binding protein YgfZ [Dickeya dadantii Ech586] gi|270342760|gb|ACZ75525.1| folate-binding protein YgfZ [Dickeya dadantii Ech586] Length = 326 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 31/248 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L + + + + G + +LQ +TADV L A +GK+ + Sbjct: 19 TLMSLDDWALVTLAGPDTVKYLQGQLTADVNALQAGEQVLCAHCDAKGKMWSTVHLFHYG 78 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN------------------------VIIEIQPI 97 + LE RS RDS + +L Y + S + + P Sbjct: 79 DGLAYLE-RRSVRDSQLAELKKYAVFSKTTLTADDSVVLLGAAGDNIRHHLAALFDTLPD 137 Query: 98 NGVVLSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + + T + S ERF + + +D + + L I G Sbjct: 138 TDNAVVHHPGATLVHLSQPAERFVLVLDAQRAAVVIDALQAQITRNDSRQWLALEIEAGR 197 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 ++ + P + L GIS TKGCY GQE+V+R ++R ++ + G+ Sbjct: 198 PVIDS-ANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGSGAQ 256 Query: 213 LPPSGSPI 220 P G + Sbjct: 257 TPAVGDEL 264 >gi|58258597|ref|XP_566711.1| mitochondrion protein [Cryptococcus neoformans var. neoformans JEC21] gi|134106693|ref|XP_777888.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var. neoformans B-3501A] gi|74687704|sp|Q5KP91|CAF17_CRYNE RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|50260588|gb|EAL23241.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var. neoformans B-3501A] gi|57222848|gb|AAW40892.1| mitochondrion protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 375 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 106/327 (32%), Gaps = 76/327 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L+++S +++ G A FL+ + DV L S L G++L + ++ Sbjct: 7 AHLAHKSVLELSGPDAQKFLKGLSCKDVEYLAGG---YSGFLNASGRVLHTAFVFPRSKN 63 Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-------------- 106 ++++ E L L +KLRS V I ++ +W Sbjct: 64 SYLITHESPEDHPAPLTSLLPPFKLRSKVRIKDVTSQWDAWSAWGSDLQGGPSPIRTWKM 123 Query: 107 ------------EHTFSNSSFIDER---------FSIADVLLHRTWGHNEKIAS-----D 140 E + D+ + L G +A+ + Sbjct: 124 GSGGASESHWDWEGGVRDLGLRDDEVGCWDLRAGWPHMGRQLLIPKGEKPSLATSHDLGN 183 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + Y R+ G+ + T+ LP P ++ MD+ G+ KGC++GQE+ R H Sbjct: 184 MDDYELHRMLLGVPEGPTEILPGHALPLESCMDIHGGVDFRKGCFLGQELTVRTYHTGAT 243 Query: 201 RKRPMIITG------------------------TDDLP------PSGSPILTDDIEIGTL 230 RKR + + P P S G + Sbjct: 244 RKRILPVRLIPLDQTSSSSISDLLSSSPQQSLDEVSTPLDITYHPPSSSATRKPRSAGKI 303 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMAL 257 + LA+ R++ + G L Sbjct: 304 LSLHNAVGLALVRLEMAERCWWSGDIL 330 >gi|225024513|ref|ZP_03713705.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC 23834] gi|224942664|gb|EEG23873.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC 23834] Length = 285 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 100/278 (35%), Gaps = 15/278 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L +V G A FL + ++ +L L A + +P+G++L L+ + Sbjct: 3 TLCKLPFFGVAEVSGADAAEFLHSQLSNHILDLQPGEACFATYNSPRGRVLANMLVLRRA 62 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDER 119 D F+L + ++ I +L + LRS + V + ++ F E Sbjct: 63 -DRFLLVMAADLLEATIKRLRMFVLRSKTVFHTDSAWQVYGQSGADTGVDAAALKFAAEE 121 Query: 120 FSIADVLLHRTWGH------NEKIASDIKTYHELRINHGIVDPNTDFLP---STIFPHDA 170 ++L G+ +D E I+ + Sbjct: 122 GDNGLIMLVLAGGNRMVLSPAPLPDADYPAAAEAWQAAEILQGRPWISQPTMESSVAQML 181 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 LL G+ KGCY GQE+++R Q+R +R+ + + GS + D E+G + Sbjct: 182 NQHLLGGVHFKKGCYPGQEIIARAQYRGQVRRGMAVCRSAMPV-AVGSKVEADGEEVGIV 240 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 A+ + + H G AL G ++ Sbjct: 241 INSAAYDG-AVVLLAVIKHG-AAGKALQAGGQALQTLK 276 >gi|312171240|emb|CBX79499.1| tRNA-modifying protein ygfZ [Erwinia amylovora ATCC BAA-2158] Length = 328 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 33/276 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G I +LQ +T DV LP+ R +A +GK+ + Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 +E RS D +++L Y + + + + P Sbjct: 79 AGGMAYIE-RRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG----HNEKIASDIKTYHELRINHG 152 + + T ER+ + E +D + L I G Sbjct: 138 DAESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + P A + L+ IS KGCY GQE+V+R + R ++ + G Sbjct: 198 WPIIDA-ATSAQFIPQAANLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKAG 256 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + P + L ++++G G LA ++D D Sbjct: 257 VVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289 >gi|320325557|gb|EFW81619.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. glycinea str. B076] Length = 315 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + + T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGSRCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q + ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128 Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158 + + R S L G + + S + + +I GI Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + +G + + + LA+ + D ++ +G AL + + Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304 >gi|321249108|ref|XP_003191342.1| mitochondrion protein [Cryptococcus gattii WM276] gi|317457809|gb|ADV19555.1| Mitochondrion protein, putative [Cryptococcus gattii WM276] Length = 375 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 108/327 (33%), Gaps = 76/327 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +LS++S +++ G A FL+ + DV L S L G++L I ++ Sbjct: 7 AHLSHKSVLELSGPDAQKFLKGLSCKDVEYLGGG---YSGFLNASGRVLHTAFIFPRSKN 63 Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-------------- 106 ++++ E L+ L +KLRS V I ++ +W Sbjct: 64 SYLITHESPEDHPAPLLSLLPPFKLRSKVRIKDVTNQWDAWSAWGSDLQGGPHPIRTWKM 123 Query: 107 ------------EHTFSNSSFIDER---------FSIADVLLHRTWGHNEKIAS-----D 140 E + D+ + L G +A+ + Sbjct: 124 GSGGASESHWDWEGGIRDLGLRDDEAGCWDLRAGWPRMGRQLLVPKGEKPSLATSHDLGN 183 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + Y R+ G+ + + LP P ++ MD+ G+ KGCY+GQE+ R H Sbjct: 184 VHDYELHRMLLGVPEGPKEILPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 243 Query: 201 RKRPMIIT------------------------GTDDLP------PSGSPILTDDIEIGTL 230 RKR + I D+P P + G + Sbjct: 244 RKRILPIRLIPLDQSSSSSISDLLSFSPQQSLAEVDIPLDITYHPPSTSATRKPRSAGKI 303 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMAL 257 + LA+ R++ + G L Sbjct: 304 LSLHNAVGLALVRLEMAERCWWSGDIL 330 >gi|77457584|ref|YP_347089.1| glycine cleavage T protein [Pseudomonas fluorescens Pf0-1] gi|77381587|gb|ABA73100.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 313 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 108/302 (35%), Gaps = 39/302 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L A A T +G++ F I +E D Sbjct: 8 CTLSHEGVLAVRGADAGKFLQGQLTCNINYLSETQASLGARCTQKGRMQSSFRIV-LEGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFS-- 111 +L + + + + L Y + S V + + + S E Sbjct: 67 GVLLAMAGALLEPQLADLKKYAVFSKSKLTDESASWVRFGLDHGDAALSSLGLELPAETD 126 Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 + I R S L + + +++ + +I GI Sbjct: 127 SVARHEGLIAIRVSPNRAELWVPADQADTVKGKLCAQLTEAELNQWLLGQIRAGIGQ-VM 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + +LP G Sbjct: 186 PSTRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRVKLDAAELPEPG 245 Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDH-----AIKKGMALTVHGVRVKA 266 + + IG + + + LA+ + + + +G AL + + + Sbjct: 246 TALFAPSHGSSIGEVVLAARTEKNIELLAVLQAEAAEAGDLHLGSAEGPALHLLDLPYEL 305 Query: 267 SF 268 Sbjct: 306 DR 307 >gi|292487135|ref|YP_003530005.1| tRNA-modifying protein ygfZ [Erwinia amylovora CFBP1430] gi|292900483|ref|YP_003539852.1| aminomethyl transferase (glycine cleavage system T-protein) [Erwinia amylovora ATCC 49946] gi|291200331|emb|CBJ47459.1| putative aminomethyl transferase (putative glycine cleavage system T-protein) [Erwinia amylovora ATCC 49946] gi|291552552|emb|CBA19597.1| tRNA-modifying protein ygfZ [Erwinia amylovora CFBP1430] Length = 328 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 33/276 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G I +LQ +T DV LP+ R +A +GK+ + Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 +E RS D +++L Y + + + + P Sbjct: 79 AGGMAYIE-RRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG----HNEKIASDIKTYHELRINHG 152 + + T ER+ + E +D + L I G Sbjct: 138 DAESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + P A + L IS KGCY GQE+V+R + R ++ + G Sbjct: 198 WPIIDA-ATSAQFIPQAANLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKAG 256 Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + P + L ++++G G LA ++D D Sbjct: 257 VVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289 >gi|145509709|ref|XP_001440793.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408021|emb|CAK73396.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 37/274 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L N+S + + G+ LQ I T D+ + + L G+++L L+ + D Sbjct: 9 ARLDNRSIVSIKGREVCEILQGITTNDLRQIQQSQSTL--FLNTNGRVILIVLLWQYCND 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------NGVVLS--- 103 ++ID+ + SLI+ + + +R V I G ++ Sbjct: 67 EIWMDIDKEIKSSLINHIKKFLIRKKVQITDYEDQLHVFQVYGPQVKLSNKEGEAITDPN 126 Query: 104 --WNQEHTFSNSSFIDERFSIADVLLH----RTWGHNEKIASDIKTYHELRINHGIVDPN 157 + E + N +D R S + + N+ D+ + R+ I + Sbjct: 127 NDLSDEGDYRNLVAVDPRSSSIGIRMVTNEMPDLKENDIQVQDLAHFEISRLTEAIFEGK 186 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 P D N I+LTKGCY+GQE+ +R H +IRKR + + + Sbjct: 187 EVVNK---IPFQVNFDFWNSINLTKGCYVGQELTARTYHTGVIRKRLLPFKVVSNNNTTN 243 Query: 218 SP---ILTDDIEIGTLGVVVGKKALA---IARID 245 I + E+G + +A ID Sbjct: 244 LEDQIINNGEQEVGKVVKSSNNFGIANVNYLDID 277 >gi|116205227|ref|XP_001228424.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51] gi|88176625|gb|EAQ84093.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51] Length = 517 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 104/329 (31%), Gaps = 98/329 (29%) Query: 17 KSAIPFLQAIITADV-----------LTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64 A +LQ +ITA++ L +A LT QG+ L I + DT Sbjct: 206 PDAAKYLQGVITANLFPGYAGPIPTSEHLRSDAGFYAAFLTAQGRTLHDVFIYRDARDTA 265 Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +++E+D ++ D L + +KLR+ + + E T + Sbjct: 266 HPPGHSWLVEVDAAEADRLQKHICRHKLRAKFDVRLLDE--------GEGTVWQAVIWGP 317 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 S L ++ L + PH++ D ++ I Sbjct: 318 PHSPGIKLPPPPLHARH------------------PRGQSELLFNQALPHESNTDAMHAI 359 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---TDDLPPSGS---------PILTD--- 223 KGCY+GQE+ R +HR ++RKR + PP G+ I Sbjct: 360 DFRKGCYVGQELTIRTEHRGVVRKRILPCVLYPDNGQQPPPGNLDLVAGYRPEIEDGVTA 419 Query: 224 -----------------DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG----- 261 G VG LA+ R++ + + G A + G Sbjct: 420 EQIPREASIGRAPGGKKGRSAGKWLSGVGNVGLALCRLEIMTDVVLPGEASSGAGGFGDG 479 Query: 262 -----------------VRVKASFPHWYK 273 R+KA P W + Sbjct: 480 DEFVVGVGAGEGEEGRKARIKAFVPEWLR 508 >gi|326386667|ref|ZP_08208289.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370] gi|326208982|gb|EGD59777.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370] Length = 249 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 11/215 (5%) Query: 5 YLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 L +++ +++ G+ FLQ ++T DV + + +LTPQGK L FL+ + Sbjct: 6 RLFDRALVRLSPLEPGEDVAAFLQGLVTNDVTG---PLPVWTGLLTPQGKALFDFLVWR- 61 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E D +L+ + D+L +L I + + V Q ++ D R Sbjct: 62 EGDDLLLDCEAGSADALAKRLSL-YRLRRRIAIARDESLAVHWLPQGEDAPETASPDPRL 120 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 AD+ L + + + + R+ G+ + + + L G+S Sbjct: 121 --ADLGLRWIAPASSRDEAADAAWQAHRLALGVPEGQAEIGSDATLWLETNATDLAGVSF 178 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 TKGCY+GQE +R+ R + +R +++ P Sbjct: 179 TKGCYVGQENTARMNWRQKVNRRLVVVPLDQSRPE 213 >gi|319786898|ref|YP_004146373.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1] gi|317465410|gb|ADV27142.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1] Length = 267 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 18/267 (6%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G A+ F A +DV L + S L P+G+++ F + + + L + Sbjct: 1 MLALEGPDAVEFAHAQFASDVKALEIGSWQWSTWLNPKGRVIALFALLRTGAQSLRLVLP 60 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------RFSIAD 124 + + D L + R V + + ++ + E R +I+ Sbjct: 61 DANATLVGDTLRKFVFRRKVTLTPLAELSIAGAFASLEAGNRVLVGTEDSDEGLRLAISP 120 Query: 125 VLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 R G + + + ++ + GI + P ++ L S++KG Sbjct: 121 GRTLRLGGAPAVESTAALAAWNVADLRAGIPRLG-EAQVEQWTPQQLGLERLQAYSVSKG 179 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK---KALA 240 CY GQE+V+R +++ ++ D + P GS ++ D+ +GT+ V GK ALA Sbjct: 180 CYPGQEIVARTHFLGKAKRQLALLQVADAVAP-GSEVVQDERAMGTVVAVAGKAPRWALA 238 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKAS 267 + ++ + L V G V+ Sbjct: 239 VLPLELAE------SPLLVDGQPVRIE 259 >gi|28871370|ref|NP_793989.1| hypothetical protein PSPTO_4228 [Pseudomonas syringae pv. tomato str. DC3000] gi|213971130|ref|ZP_03399249.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301381854|ref|ZP_07230272.1| hypothetical protein PsyrptM_04440 [Pseudomonas syringae pv. tomato Max13] gi|302059023|ref|ZP_07250564.1| hypothetical protein PsyrptK_03467 [Pseudomonas syringae pv. tomato K40] gi|28854621|gb|AAO57684.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213924119|gb|EEB57695.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 315 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 43/302 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F + E D Sbjct: 10 CTLSHEGVLAVRGVDAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + + + L Y + S V +Q +G ++ + Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESSAWVRFGLQEGDGALVGLGLDLPQDTG 128 Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + R AD L R + + ++R+ G V Sbjct: 129 TVVRANELIAIRVSPARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFG 188 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPP 215 +T P + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPA 245 Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264 G+ + + +G + + + LA+ + D ++ +G AL ++ + Sbjct: 246 PGTALFSPVHGSAVGNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPY 305 Query: 265 KA 266 Sbjct: 306 TL 307 >gi|84623846|ref|YP_451218.1| hypothetical protein XOO_2189 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58426529|gb|AAW75566.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367786|dbj|BAE68944.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 290 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 14/276 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 14 SLQDIQYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FS 121 ++ + + +L + R + I + E + + + + Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVFRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLD 133 Query: 122 IADVLLHRTWG--HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + L RT E +A+ I+ + + G+ + P +D Sbjct: 134 LGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALD 192 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSV 251 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 G ALA+ ++ A A HG R +A P Sbjct: 252 AGNLALAVLPLELTLDADTPLQA-GAHGARPRAIAP 286 >gi|330898494|gb|EGH29913.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. japonica str. M301072PT] Length = 315 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 113/302 (37%), Gaps = 43/302 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNENKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + ++ + L Y + S V +Q + ++S + Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETD 128 Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 S + R + AD R + + ++R+ G V Sbjct: 129 SVVRANDLIAIRVSPGRAELWVRSAQADSTKSRLAAQLSEGLLNDWLLGQIRVGIGQVFG 188 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215 +T P + + G+S KGCY GQE+V+R+Q+ +++R +T +++P Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSNEEIPQ 245 Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264 G+ + + +G + + + LA+ + D + +G AL + + Sbjct: 246 PGTALFSPVHASAVGNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPY 305 Query: 265 KA 266 Sbjct: 306 TL 307 >gi|312106517|ref|XP_003150732.1| aminomethyltransferase [Loa loa] gi|307754103|gb|EFO13337.1| aminomethyltransferase [Loa loa] Length = 246 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 12/242 (4%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90 V + A+ + +L +G+I+ ++ + + ++E DR+ + L +K+ +V Sbjct: 5 VPQVADGRAQYALLLNSRGRIVEDLILYRQAGE-ILIESDRNNQSKLRKLFEMFKVHKDV 63 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 IE + + V + + + D R + +++ D Y E R N Sbjct: 64 TIEEETESCVYHTDSITNDIPG--IQDPRVPSFGKRILSKILPDDQTV-DEHAYRERRFN 120 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 GI + ++ P D++NG+S KGCY+GQE+ +R + IRKR + T Sbjct: 121 FGIPEGPSELAGE--LPLFMNADIMNGVSANKGCYLGQELTARALNAPEIRKRLLPFTCR 178 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + +GS + ++ G + GKK LA+ I + ++ P Sbjct: 179 GMV--TGSLVNSEGRRAGKVIACTGKKGLALVPISRNTSPTH----FQSMNEDIEIFLPP 232 Query: 271 WY 272 W+ Sbjct: 233 WW 234 >gi|310766531|gb|ADP11481.1| putative global regulator [Erwinia sp. Ejp617] Length = 328 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 98/278 (35%), Gaps = 37/278 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G I +LQ +T DV LP +A +GK+ + Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPANQHSPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 + +E RS D+ + +L Y + + + + P Sbjct: 79 ADGLAYIE-RRSLLDNQLSELKKYAVFAKISLTADDESVLLGVAGFQARAALANLFGTLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 G + + T ERF A + + G E +D + L I Sbjct: 138 DAGSPVIQQGDSTLLWFDLPAERFLLVTTAEKAAEIAEKLAG--EARLNDSAQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + L IS KGCY GQE+V+R + R ++ + GT Sbjct: 196 AGWPIIDA-ATTAQFIPQATNLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGT 254 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 P + L ++++G G LA ++D D Sbjct: 255 AGGVPQANDAL--EMKMGENWRRTGTI-LAACQLDNGD 289 >gi|188534912|ref|YP_001908709.1| putative global regulator [Erwinia tasmaniensis Et1/99] gi|188029954|emb|CAO97838.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 328 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 101/278 (36%), Gaps = 37/278 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + G I +LQ +T DV +P R +A +GK+ + Sbjct: 19 LTLISLEAWALVNASGADHISYLQGQVTLDVADMPASQHRPAAHCDAKGKMWSNLRLFHR 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 + +E RS RD+ + +L Y + + + + P Sbjct: 79 MDGLAYIE-RRSLRDNQLSELKKYAVFAKITLAADDESVLLGVAGFQARAALANLFSTLP 137 Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 G + + T ERF A + + G E +D + L I Sbjct: 138 DAGSPVIQQDDSTLLWFDLPAERFLLVTPAEKAAEIAEKLAG--EAQLNDSTQWLALDIE 195 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P + L IS KGCY GQE+V+R + R ++ + GT Sbjct: 196 AGFPVIDA-ATSAQFIPQATNLQALGAISFKKGCYTGQEMVARAKFRGANKRALYWLAGT 254 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 + P + L ++++G G LA ++D D Sbjct: 255 AGVVPVANDAL--EMKMGENWRRTGTI-LAACQLDNGD 289 >gi|85707996|ref|ZP_01039062.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1] gi|85689530|gb|EAQ29533.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1] Length = 243 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 16/216 (7%) Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56 MS L++++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + F Sbjct: 1 MSGKLLNDRAIIRLAATEDGEDVRGFLQGLVTNDVSG---ELPVYAALLSAQGKAMFDFF 57 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 I + E+ +L+ + D L +L Y+LR + I V W++E + + Sbjct: 58 IWEGEDGEILLDCEAEAADDLARRLSLYRLRRKIDIARDETQAVF--WSREK--FDGAKP 113 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D R S L +R + S Y R++ G+ + + + I + L+ Sbjct: 114 DPRLSD---LGYRAVAERSETESADAEYLAYRLSQGVPEGRAEI--ADILWLETNAVELH 168 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 G+S KGCY+GQE +R+ R + +R +++ Sbjct: 169 GVSFEKGCYVGQENTARMNWRQKVNRRLVVVPLDQS 204 >gi|237653170|ref|YP_002889484.1| folate-binding protein YgfZ [Thauera sp. MZ1T] gi|237624417|gb|ACR01107.1| folate-binding protein YgfZ [Thauera sp. MZ1T] Length = 345 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 94/286 (32%), Gaps = 40/286 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V L + I+ G + FL +++ DV + A ++ +P+G+++ FL+ EE Sbjct: 40 AVPLLHLGTIRSQGPDSAAFLHNLVSNDVKHMEADTAAWNSFNSPKGRMIASFLVW-TEE 98 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + K Y LRS V + ++ + + Sbjct: 99 GGHALALSADILPAFLKKFSMYVLRSKVKLADASAEVALIGLAGPQAVAIAQAAGAALPA 158 Query: 123 ADVL-----------------------------LHRTWGHNEKIASDIKTYHELRINHGI 153 D+ L + + + I G+ Sbjct: 159 EDMRQAVSAAGVRCIRLGAQRLVLAVATDAAPALFDALVAAGALRAGTAAWQLGMIRAGL 218 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DD 212 T +L+ G+ KGCY GQE+V+R Q+ ++KR + Sbjct: 219 A-LVTAPTQEEFVAQMLNYELIGGVDFHKGCYPGQEIVARTQYLGKLKKRTYRLALPAGS 277 Query: 213 LPPSGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 G+ + + G L V G +ALA+ + + Sbjct: 278 TAAPGTDVYAPDFGEQSAGKLVNVAPTADGGVEALAVIQSSSAEAG 323 >gi|104783273|ref|YP_609771.1| hypothetical protein PSEEN4300 [Pseudomonas entomophila L48] gi|95112260|emb|CAK16987.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 315 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 106/302 (35%), Gaps = 39/302 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L A A +G++ F I E + Sbjct: 10 CTLSHEGILAVRGSDAGKFLQGQLTCNLNYLSDDHASLGARCMVKGRMQSSFRILP-EGN 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 ++L + + + L Y + S + + V Q + ++ Sbjct: 69 GYLLAMASELLEMQLADLKKYAVFSKATLADESAAWVRFGLQQGDNALQALGLEVPGETG 128 Query: 124 DVLLH-------------RTWGHNEKIAS------------DIKTYHELRINHGIVDPNT 158 + H W ++ A+ + + ++ GI Sbjct: 129 ATVRHEGLIAVTASTGRVELWAPADQAANVREKLAAQLPEGTLNDWLLGQVRAGIGQ-VM 187 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217 P + ++G+S KGCY GQE+V+R+Q+ +++R + + +P G Sbjct: 188 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDETAVPAPG 247 Query: 218 SPILTD--DIEIGTL--GVVVGKKA--LAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 + I + +G + G G LA+ D V +G LT+ + + Sbjct: 248 AEIFSPTHGSSVGEVVIGASSGNAVELLAVLSADAVADDNLHLGSLEGPRLTLLDLPYEL 307 Query: 267 SF 268 Sbjct: 308 DR 309 >gi|218710580|ref|YP_002418201.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32] gi|254814153|sp|B7VK90|YGFZ_VIBSL RecName: Full=tRNA-modifying protein ygfZ gi|218323599|emb|CAV19849.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32] Length = 323 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 31/250 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109 + L +S + + ++ Y + S V IE Q I+ + S + Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKVDIEQTSDVVIGVMGASADQYIDSISESQGKVRV 142 Query: 110 FSNSSFI---DERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHGIVDPNTDF-- 160 S + + D R+++ EK++ + YHE I+D + Sbjct: 143 ISGGTAVQVSDNRWALLVTQEATEALVSSSTAEKVSEALWQYHE------ILDAQPNLSK 196 Query: 161 -LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 + P + + GIS +KGCY GQE V+R ++R + ++ I++GT S Sbjct: 197 AEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTSSDVLSLEN 256 Query: 220 ILTDDIEIGT 229 + + +G Sbjct: 257 TIELERSVGE 266 >gi|312959548|ref|ZP_07774065.1| glycine cleavage T protein [Pseudomonas fluorescens WH6] gi|311286265|gb|EFQ64829.1| glycine cleavage T protein [Pseudomonas fluorescens WH6] Length = 313 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 103/298 (34%), Gaps = 35/298 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L A A T +G++ F I ++ D Sbjct: 8 CPLSHEGVLAVRGADAAKFLQGQLTCNLNYLSDTQASLGARCTQKGRMQSSFRIV-LQGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ----------------E 107 +L + + + L Y + S + + V + Sbjct: 67 GVLLAMASELLEPQLADLKKYAVFSKSKLTDESAAWVRFGVANGDHLLTGLGLGLPAETD 126 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 I R S L + + + + + +I GI Sbjct: 127 SVARAEHLIAIRVSPGRAELWVPAESADTVRSQLAAHLDEAPLNDWLLGQIRAGIGQVMP 186 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + +P G Sbjct: 187 Q-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLKLDAAQMPEPG 245 Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 +P+ + + IG + + + LA+ + + D L G+ + P Sbjct: 246 TPLFSPSHNSAIGEVVIAAKTDLSIELLAVLQAEAADSGDVHLGTLEGPGLHL-LELP 302 >gi|86146368|ref|ZP_01064692.1| hypothetical protein MED222_22346 [Vibrio sp. MED222] gi|85835847|gb|EAQ53981.1| hypothetical protein MED222_22346 [Vibrio sp. MED222] Length = 323 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 35/252 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109 + L +S + + ++ Y + S V IE Q I+ + S + Sbjct: 83 GYALMQPKSAIEIELVEIKKYAVFSKVDIEQTSDVVIGVMGASADQYIDSISESQGKVRV 142 Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 S + + D R+++ A+ L+ + EK++ + YHE I+D + Sbjct: 143 ISGGTAVQVSDNRWALLVTQEAAEALV--SSSTAEKVSEALWQYHE------ILDAQPNL 194 Query: 161 ---LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + P + + GIS +KGCY GQE V+R ++R + ++ I++GT S Sbjct: 195 SKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTSSDILSL 254 Query: 218 SPILTDDIEIGT 229 + + +G Sbjct: 255 ENTIELERSVGE 266 >gi|261253910|ref|ZP_05946483.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891] gi|260937301|gb|EEX93290.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891] Length = 322 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 91/269 (33%), Gaps = 29/269 (10%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L+ I + G +LQ +T DV+TL + A +GK+ F + Sbjct: 21 LAIAPLTAWGAITLMGDDKKSYLQGQVTCDVVTLDEHSSTFGAHCDAKGKVWSVFRLFHH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113 + + S + + +L Y + S V + + +S Sbjct: 81 NG-GYAMFQPASLIEKELAELKKYAIFSKVEFAHSDEIALGVMGCNASILVDSLSEESGN 139 Query: 114 ----------SFIDERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 D+R+ + + + + + I G N + Sbjct: 140 VRRIDGGSAVKIDDQRWLLLVTEASAQQIVAQSNASTVAEDLWTLHDIQSGTPLLNAE-Q 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-----DDLPPS 216 + P + ++GIS KGCY GQE V+R ++R + ++ I+ G+ DD Sbjct: 199 QNEHIPQAINVQAVDGISFKKGCYTGQETVARAKYRGMNKRALFIVQGSADKAIDDNAEL 258 Query: 217 GSPILTDDIEIGTLGVV---VGKKALAIA 242 + + G L ALA+ Sbjct: 259 ERAVGENWRSAGKLLASYRFTDNTALALV 287 >gi|331230924|ref|XP_003328126.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307116|gb|EFP83707.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 403 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 34/250 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFLI 57 L ++ I + G+ + FLQ +IT ++ L + A +A LTP G++ + Sbjct: 35 TRLVDRGLISLKGEKSKTFLQGLITNNLNRLSSQEEAHHNTAFYTAFLTPPGRLQFDGFV 94 Query: 58 SKIEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQE 107 + +++ + D L+ L + L S V I + + W N + Sbjct: 95 YPEPPENEAQCLLIDHHLPEADRLLAWLRRFVLNSRVKIS-KDSRELWAVWPNHPLDNIQ 153 Query: 108 HTFSNSSFIDERFSIA-------DVLLHRTWGHNEKIA----------SDIKTYHELRIN 150 NSS +++ + A L +R G+ E + + + Y + Sbjct: 154 SLLPNSSLLEQPSNHAWKDHRGDQRLGYRIIGNPESVPELEPLAQLPEAPLSAYALHVLL 213 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 H + P+ P +A +D +G+ KGCY+GQE+ +R H +IRKR + ++ Sbjct: 214 HASLPPSLSPPYPVTLPFEANLDYHHGVDFRKGCYVGQELTARTYHTGVIRKRMVPVSIE 273 Query: 211 DDLPPSGSPI 220 D P+ + + Sbjct: 274 KDGLPALASV 283 >gi|66047189|ref|YP_237030.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae B728a] gi|63257896|gb|AAY38992.1| Glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae B728a] Length = 315 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 114/302 (37%), Gaps = 43/302 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDTSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + ++ + L Y + S V +Q + ++S + Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQQTD 128 Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 S + R + D + R H + + ++R+ G V Sbjct: 129 SVVRANDLMAIRVSPGRAELWVRSAEVDSIKSRLASHLNEAPLNDWLLGQIRVGIGQVFG 188 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPP 215 +T P + + G+S KGCY GQE+V+R+Q+ +++R +T + ++P Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQ 245 Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264 G+ + + +G + + + LA+ + D + +G AL + + Sbjct: 246 PGTALFSPVHASAVGNVVIAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPY 305 Query: 265 KA 266 Sbjct: 306 TL 307 >gi|260775217|ref|ZP_05884115.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450] gi|260608918|gb|EEX35080.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450] Length = 322 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 88/246 (35%), Gaps = 25/246 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L++ I G +LQ +T DV+ L A A +GK+ F + Sbjct: 23 LTHLTSWGMITAQGDDKKSYLQGQVTCDVVQLAEDSATFGAHCDAKGKVWSVFRLFHHRG 82 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DER 119 +L+ S ++ + +L Y + S + + L ++ + D R Sbjct: 83 GYAMLQ-PSSAIETELAELKKYAIFSKIEFAQSTDVLLGLIGDKANHVVEELSQQRGDVR 141 Query: 120 FSIAD---------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPS 163 LL E++ I + L I I + S Sbjct: 142 TIEGGTAIKIDQQRWLLAIDATTAEQLCQSINATKACEDIWTRLDIEAAIPAVTQE-QQS 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILT 222 P + L GIS +KGCY GQE V+R ++R + ++ I+ G +G+ I Sbjct: 201 EHIPQALNVQALGGISFSKGCYTGQETVARAKYRGMNKRALQIVKGHSASEIKAGAEI-- 258 Query: 223 DDIEIG 228 + +G Sbjct: 259 -ERSVG 263 >gi|227356369|ref|ZP_03840757.1| GCV family glycine cleavage complex aminomethyltransferase [Proteus mirabilis ATCC 29906] gi|227163479|gb|EEI48400.1| GCV family glycine cleavage complex aminomethyltransferase [Proteus mirabilis ATCC 29906] Length = 328 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 94/267 (35%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + S I G + +LQ +T D+ LP +A +GK+ I Sbjct: 19 LTLISLDDWSLITATGADSEKYLQGQLTTDIAALPTTEHTLAAHCEAKGKMWSTLRIFHQ 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + + + ++ + + +L Y + S V ++ Q + + F Sbjct: 79 QAGFAYI-LRKNVAEKQLTELKKYAVFSKVTFTENTDAVLLGLAGQGAAQALAEFFPEIP 137 Query: 116 -------------------IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 ERF I + + SD + L I G Sbjct: 138 RKANEVVNHQNSYLLQLPLPTERFLIVTDEETAKKLATTLPAETSDSDQWLALDIEAGYP 197 Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDD 212 +T + P + L I KGCY GQE+VSR + R ++ +++ G Sbjct: 198 IIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGAAQ 256 Query: 213 LPPSGSPI---LTDDI--EIGTLGVVV 234 LP G + L +D + GT+ V Sbjct: 257 LPDIGGSVEWQLGEDKWRKTGTVLSAV 283 >gi|148981090|ref|ZP_01816283.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3] gi|145960993|gb|EDK26317.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3] Length = 323 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 37/253 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 ++S+ S I + G +LQ +T DV+TLP + A +GK+ F + Sbjct: 24 THVSDWSAITMVGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109 + L +S + + ++ Y + S V IE Q I+ + S + Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKVDIEQTSDVIIGVMGAAADQYIDSISESQGKVRA 142 Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN--- 157 S + + + R+++ A+ L+ T EK++ + YHE I+D Sbjct: 143 ISGGTAVQVAENRWALLVTEQAAEALV--TSSSAEKVSEALWQYHE------IIDAQPHL 194 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPS 216 T + P + + GIS TKGCY GQE V+R ++R + ++ I++G T ++ Sbjct: 195 TKAEQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKREMRIVSGSTAEVLTL 254 Query: 217 GSPILTDDIEIGT 229 SPI + +G Sbjct: 255 ESPIEL-ERSVGE 266 >gi|261211566|ref|ZP_05925854.1| glycine cleavage T-protein [Vibrio sp. RC341] gi|260839521|gb|EEX66147.1| glycine cleavage T-protein [Vibrio sp. RC341] Length = 323 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 21/246 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +L+ I + G +LQ +T +V++L + A +GK+ F + Sbjct: 23 LTHLTEWGAITMVGADKKAYLQGQVTCNVVSLQEQQVIFGAHCDAKGKVWSVFRLFHHH- 81 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPIN-GVVLSWNQEHTFSNSSFIDERF 120 D + + RS ++ + +L Y + S V I E I GV+ S S + + Sbjct: 82 DGYAMFQPRSAIEAELRELKKYAIFSKVTIAESCDIAFGVMGSQANAWIDSLTEQTGDVR 141 Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163 I R + D + + + I + T + Sbjct: 142 RIEGGTAVRISELRWLLLVDAQQAEQYVNAWQGLCVEQALWTRMDIEEAVP-VVTQRAQN 200 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + ++GIS +KGCY GQE V+R ++R I ++ I+ G S +T Sbjct: 201 EHIPQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNLTKALSHDAPVTL 260 Query: 224 DIEIGT 229 + +G Sbjct: 261 ERAVGE 266 >gi|288550368|ref|ZP_05970159.2| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316] gi|288315642|gb|EFC54580.1| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316] Length = 298 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 99/263 (37%), Gaps = 35/263 (13%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G + +LQ +TADV L +A P+GK+ + + ++ +E RS Sbjct: 3 TLTGADSEKYLQGQVTADVAQLTEHQHLLAAHCDPKGKMWSNLRLFRRQDGFAFIE-RRS 61 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN--SSFIDE---------- 118 RD+ + +L Y + S V I + + V + N ++ D Sbjct: 62 LRDAQLAELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFAALPDADKPLVSEGVT 121 Query: 119 -----RFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDPNTDFLPST 164 LL E++ + + + L I G+ + + Sbjct: 122 SLLWFEHPAERFLLVTDEATAERVTEALRGEAQFNNSQQWLALNIEAGLPVIDA-ANSAQ 180 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTD 223 P + L GIS KGCY GQE+V+R + R ++ + G +P +G I Sbjct: 181 FIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAGRVPQAGEDI--- 237 Query: 224 DIEIGTLGVVVGKKALAIARIDK 246 +++IG G LA ++D Sbjct: 238 ELKIGDNWRRTGTV-LAAVQLDD 259 >gi|289676642|ref|ZP_06497532.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae FF5] Length = 281 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 101/263 (38%), Gaps = 34/263 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+++ + V G A FLQ +T ++ L + A T +G++ F I E D Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113 +L + ++ + L Y + S V +Q + ++S + Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETD 128 Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 S + R + AD + R + + ++R+ G V Sbjct: 129 SVVRANDLIAIRVSPGRAELWVRSAQADSIKSRLAAQLSEGPLNDWLLGQIRVGIGQVFG 188 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215 +T P + + G+S KGCY GQE+V+R+Q+ +++R +T +++P Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSDEEIPQ 245 Query: 216 SGSPILTD--DIEIGTLGVVVGK 236 G+ + + +G + + Sbjct: 246 PGTALFSPVHASAVGNVVMAAQD 268 >gi|145589151|ref|YP_001155748.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047557|gb|ABP34184.1| glycine cleavage T protein (aminomethyl transferase) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 336 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 40/270 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA-----------DVLTLPYKIARGSAILTPQGKI 51 L I V G A FLQ+ ++ D+ R +P+G++ Sbjct: 19 GCLLPQWGMIFVEGPDATSFLQSQLSNSLLGMKRTHDPDIAK-SSDSVRLVGYCSPKGRL 77 Query: 52 LLYFLI-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106 + I S+ +D ++L I + + +L Y LRS V + V + Sbjct: 78 ISSAWIGLFPTSESSDDRYVLFISKDIAATTAKRLAMYVLRSKVKVIDMSSEWNVSGFFD 137 Query: 107 EHT--------FSNSSFIDERFSIADVLLHRTWGHNEKIASD---------IKTYHELRI 149 S + E ++ L T K+ ++ I +++L + Sbjct: 138 AAIHDGCEHLKTSQDCLVAEIPNVLVQGLTYTRYLIAKLGNEKTEPPFEGGIDAWNDLEV 197 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 I P + + G+ KGCY GQE+V+R Q+R I++R + Sbjct: 198 LSAIPRIVL-ATQEQFVPQMINFESVAGVDFKKGCYPGQEIVARSQYRGAIKRRLFLANI 256 Query: 210 T-----DDLPPSGSPILTDDIEIGTLGVVV 234 T D L G+ + D G+VV Sbjct: 257 TNASIKDALTSPGTELFHSDDSNQPAGMVV 286 >gi|197285868|ref|YP_002151740.1| global regulator [Proteus mirabilis HI4320] gi|194683355|emb|CAR44062.1| putative aminomethyltransferase [Proteus mirabilis HI4320] Length = 328 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 95/267 (35%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + S I G + +LQ +TAD+ LP +A +GK+ I Sbjct: 19 LTLISLDDWSLITATGADSEKYLQGQLTADIAALPTTEHTLAAHCEAKGKMWSTLRIFHQ 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + + + ++ + + +L Y + S V ++ Q + + F Sbjct: 79 QAGFAYI-LRKNVAEKQLTELKKYAVFSKVTFTENTDAVLLGLAGQGAAQALAEFFPEIP 137 Query: 116 -------------------IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 ERF I + + SD + L I G Sbjct: 138 RKANEVVNHQNSYLLQLPLPTERFLIVTDEETAKKLATTLPAETSDSDQWLALDIEAGYP 197 Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDD 212 +T + P + L I KGCY GQE+VSR + R ++ +++ G Sbjct: 198 IIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGAAQ 256 Query: 213 LPPSGSPI---LTDDI--EIGTLGVVV 234 LP G + L +D + GT+ V Sbjct: 257 LPDIGGSVEWQLGEDKWRKTGTVLSAV 283 >gi|255318647|ref|ZP_05359878.1| glycine cleavage T protein [Acinetobacter radioresistens SK82] gi|262379127|ref|ZP_06072283.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304329|gb|EET83515.1| glycine cleavage T protein [Acinetobacter radioresistens SK82] gi|262298584|gb|EEY86497.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 239 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 27/231 (11%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A FLQ +TADV L R +AI +G+I +S+ + + F + + + Sbjct: 10 SLKGVDAQKFLQGQVTADVERLDSNY-RYTAICDLKGRIHFGLWLSRQDAENFSIVVTQD 68 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 + + + Y S + E I V S + T RFS D Sbjct: 69 QSEEFAKHIRKYGAFSKMTFE--DIGAVFPSMDNALT---------RFSSED-------- 109 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 +D+ + I G T P + + G+ KGCY+GQE+V+ Sbjct: 110 ------TDLNAWQLQAIEQGQA-WITSLTEHEFQPQELRLHQRGGVHYDKGCYLGQEIVA 162 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 R+ + + ++ G+ P + + D + ++ V G KAL +A+ Sbjct: 163 RLWFKAKPKHWLHLVQGSGTAPAPATLLHDDVEVVNSIAVENGYKALVVAK 213 >gi|254448752|ref|ZP_05062209.1| glycine cleavage T protein [gamma proteobacterium HTCC5015] gi|198261593|gb|EDY85881.1| glycine cleavage T protein [gamma proteobacterium HTCC5015] Length = 333 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 116/300 (38%), Gaps = 46/300 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + +KV G A FL +++DV L ++ S+ +P+G + + + K+ D +L + Sbjct: 35 AILKVSGSDATEFLHGQLSSDVKNLQVGSSQLSSYSSPKGMVYSHCRLYKLSNDECLLRL 94 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------SNSSFIDER 119 RS S+ +L + LR+ V I + GV+L E + + F Sbjct: 95 PRSLTVSVGKRLKMFVLRAQVEITVDESVGVLLLAGSEASALTPLCDDLPDTPDHFSQSE 154 Query: 120 FSIADVL--LHRTWGHNE---------------------KIASDIKTYHELRINHGIVDP 156 SIA L + R G +A D T LRI G Sbjct: 155 HSIALKLPDIQRENGSLPYYEVVLSNEHLSTAWKTLTQTHLACDPSTADLLRILSGEPHL 214 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + + + L GIS KGCY GQE +++ Q+R +R + +TG +L Sbjct: 215 SPS-TTEQFVAQNLNLHLNGGISFKKGCYPGQEYIAKTQYRGRLRSQLFRLTGETEL-EP 272 Query: 217 GSPILTD---DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 G+ + ++ + EIGT+ + A+ R+ A + G T P Sbjct: 273 GAALYSNPDSNTEIGTVLKSAWDGQSYQTTAVLRL----KATESGTVYTGDNSECAVHTP 328 >gi|262166511|ref|ZP_06034248.1| glycine cleavage T-protein [Vibrio mimicus VM223] gi|262026227|gb|EEY44895.1| glycine cleavage T-protein [Vibrio mimicus VM223] Length = 290 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 30/275 (10%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G +LQ +T +V++L + A +GK+ F + D + + +S + Sbjct: 3 GADKKSYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHN-DGYAMFQPQSAIE 61 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------SFIDERFSIA 123 + +L Y + S V I + + +Q + + +S R S Sbjct: 62 VELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVRRIEGGTAVRISEL 121 Query: 124 DVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 LL T E+ + + + + I + T + P + +N Sbjct: 122 RWLLLVTAEQAEQYVNAWQGLCVEQALWTRMDIEEAVP-VVTQNAQNEHIPQALNVQAVN 180 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 GIS TKGCY GQE V+R ++R I ++ I+ G + P S + + +G G+ Sbjct: 181 GISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINTPLSHEESVILERAVGENWRSAGQ 240 Query: 237 --------KALAIARIDKVDHAIKKGMALTVHGVR 263 +AI I + + +++G+ L + Sbjct: 241 LLTHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 274 >gi|303257418|ref|ZP_07343431.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Burkholderiales bacterium 1_1_47] gi|331000631|ref|ZP_08324286.1| glycine cleavage T-protein barrel domain protein [Parasutterella excrementihominis YIT 11859] gi|302859775|gb|EFL82853.1| putative glycine cleavage T-protein (Aminomethyl transferase) [Burkholderiales bacterium 1_1_47] gi|329570903|gb|EGG52611.1| glycine cleavage T-protein barrel domain protein [Parasutterella excrementihominis YIT 11859] Length = 304 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 44/300 (14%) Query: 1 MSSVYLSNQSF--------IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL 52 MS + L++ +F + V G+ A FLQ ++T +V T+ AR +A QG+ Sbjct: 1 MSMLELNSWTFSEEQDFVFVVVRGEDAENFLQGMLTQNVKTMGPTDARWTAACNHQGRTA 60 Query: 53 LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 LI +I + F + + +S +D+L + LRS V IEI P + Sbjct: 61 ATSLIVRIP-NGFGMLMPKSIAQDEVDRLSKFILRSKVEIEILPEPITYFCSDDAKAIDR 119 Query: 113 SSFIDERFS----IADVLLHRTWGHNEKIA----------------SDIKTYHELRINHG 152 R + D ++ N+ + IK ++ R+ Sbjct: 120 PCPALPREPMQAYVGDSVIVVRLPSNDAQGMHGKFVAIGKIPDDMYAPIKAHN--RLARS 177 Query: 153 IVDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--I 206 +++ + P MDL+ GI+ KGCY GQE++S+ ++ +++R + Sbjct: 178 LMEEGIALIEKPEVLEWLPQALNMDLIGGIAFNKGCYTGQEIISKTENLGKVKRRMFLGV 237 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G DL G+ + ++ +G + G+ L + + +D L V V V+ Sbjct: 238 ARGVKDL-DEGTEVFMENEPMGRVIQSDGEHFLFVLTYEYMD------SELYVKDVPVEI 290 >gi|319941082|ref|ZP_08015418.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis 3_1_45B] gi|319805439|gb|EFW02241.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis 3_1_45B] Length = 322 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 110/298 (36%), Gaps = 36/298 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S N + I+V G+ A FL T + L + +P+G++L + Sbjct: 13 SIACAPNTALIRVTGEDARHFLHGQFTQKIENL-AGRTTLAGYCSPKGRLLAVMRAW-LS 70 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSF----- 115 D +L + + + +L Y LRS V E + P ++++ +E + ++ Sbjct: 71 GDAVMLALPAEMAEGFLKRLHMYVLRSKVSFEVVDPAPAMLIAVGEEGAKTLAALGLEMP 130 Query: 116 ---------------IDERFSIAD----------VLLHRTWGHNEKIASDIKTY-HELRI 149 I+ ++ +L + + + I Sbjct: 131 AHGVCIEKDGFTLLGIEPSQTVPGFCAGGARALVILPAGKTAADFGLTPAPAAWALASSI 190 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-IT 208 + GI T P ++L++G+S +KGCY GQEVVSR+QH +R + I Sbjct: 191 SAGIPQ-VLPPTRETFVPQAVNLELVDGVSFSKGCYPGQEVVSRLQHLGETNRRAAVGIL 249 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + P+G+P+ E G + V + ++ G+ LT G + Sbjct: 250 SAEAAAPAGAPVYAKGEEAGKVVRAVTLGGRTLVLFSATIGSLFAGITLTPDGQPLDL 307 >gi|307545134|ref|YP_003897613.1| aminomethyltransferase [Halomonas elongata DSM 2581] gi|307217158|emb|CBV42428.1| K06980 [Halomonas elongata DSM 2581] Length = 360 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 100/287 (34%), Gaps = 32/287 (11%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + + V G A FLQ +A + + + A TP+G++L + ++ + Sbjct: 52 PLVHLGILDVVGDGAERFLQGQTSAQLSLVDGEFAPLGCFCTPKGRVLANVQLWRVAPNH 111 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117 + L SL + L + V + + ++ + E + +D Sbjct: 112 YRLLTHHELVASLAEHLAKFAPFYRVELTPRDDLALIGLFGHEAPAVAEALLDVEPPGAW 171 Query: 118 ---ER------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 ER AD + + D T+ I G+V Sbjct: 172 RQVEREALQVVGHPGPVTRMLLCLPTADAEATWSRLAAQVTPVDSATWRLHDIQAGLV-W 230 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPP 215 + P + L GIS KGCY GQEVV+R R ++KR M + LP Sbjct: 231 LDASQRDSYLPQMINWEALGGISFKKGCYTGQEVVARAHFRGQVKKRLMRAQLEGEQLPE 290 Query: 216 SGSPIL-TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 GS +L D +G + A A I V + L+V G Sbjct: 291 PGSAVLDAADKRLGEVLS-AELDAYGQAEILAVMSTREPKEPLSVAG 336 >gi|238921204|ref|YP_002934719.1| hypothetical protein NT01EI_3346 [Edwardsiella ictaluri 93-146] gi|259710250|sp|C5BAS5|YGFZ_EDWI9 RecName: Full=tRNA-modifying protein ygfZ gi|238870773|gb|ACR70484.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 331 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 90/250 (36%), Gaps = 35/250 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I V G A +LQ +TAD+ +L QGK+ + + Sbjct: 20 LTLMRLDDWLPINVSGPDAQSYLQGQLTADLPSLAATQHTLCGHCDAQGKLWSSLRLLRR 79 Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + T++L RS + +L Y + + I + V+L + R Sbjct: 80 RDGFTYLLR--RSVATLQMLELKKYAVFAKASI-VSDEGAVLLGVAGAQASEALGALFPR 136 Query: 120 FSIADV---------LLHRTWGHNEKIA---------------------SDIKTYHELRI 149 AD LL+ W + +D + L I Sbjct: 137 LPDADAPLLQAGRSHLLYMAWPQPRYLLICDDADEAERIFAPLSARARLADSAQWLALDI 196 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GI + + P + L GIS TKGCY GQE+V+R ++R R+ + G Sbjct: 197 ESGIP-LIDEPNCDSFLPQAVNLQALGGISFTKGCYSGQEMVARAKYRGANRRALFWLRG 255 Query: 210 TDDLPPSGSP 219 + + P S Sbjct: 256 SAERLPHASE 265 >gi|254430061|ref|ZP_05043768.1| folate-binding protein YgfZ [Alcanivorax sp. DG881] gi|196196230|gb|EDX91189.1| folate-binding protein YgfZ [Alcanivorax sp. DG881] Length = 315 Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 32/293 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + +D ++ Sbjct: 28 DHLAVIRAYGEEAGHYLQGQLSCDLHEVDNGGHLTGMHLSLKGRGLVSVRIVQDGDD-YL 86 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFS--NSSFIDE 118 + + +++I L+ Y+LR+ V ++ ++G + + + E S N + Sbjct: 87 MLCPAGQSEAVIKSLMKYRLRAKVEFQVDEQAVLMGLSGALPATSPEPGQSGRNGQGLWL 146 Query: 119 RFSIADVLL----------HRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIF 166 R+ D L T ++ A++ + + I+ G +V P + Sbjct: 147 RYPNTDHALLITDTEQAESVWTVLALDRAATNANGWRQADIDAGEGMVYPGAE---DLFL 203 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPILTDD 224 P D+ G++ KGCY GQEVV+R+ + +++R I DL P + +D Sbjct: 204 PQVLNYDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRIDYAAEVDLAPGETLRNSDG 263 Query: 225 IEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 G + G AL + R D K L + + P +K Sbjct: 264 KAAGEVVSSARNHAGHSALVVLRRDTDGVLFKDEQPLDSQLGTLPYALP--WK 314 >gi|270356904|gb|ACZ80689.1| putative mitochondrial transferase CAF17 protein [Filobasidiella depauperata] Length = 374 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 106/316 (33%), Gaps = 74/316 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L + +++ G + FL+ + DV L S L G++L I + Sbjct: 9 AHLKQKLVLQISGPDSQKFLKGLSCKDVEYLSGG---YSGFLNASGRVLHTVFIFPRSDT 65 Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWN--------------- 105 ++++ E S + L L +KLRS V I ++ SW Sbjct: 66 SYLITHESQESHPEPLTKLLPPFKLRSKVRIKDVTDQWDAWSSWGSSLAQIDSPRRLWKI 125 Query: 106 QEHTFSNSSF------------------IDER--FSIADVLLHRTWGHNEKIASD----- 140 + S + D R ++ L G+ +A++ Sbjct: 126 GSGGAAESHWEWQQGVAQLNLAEGEVGCWDLRAGWNGMGQQLLVPKGNRPSLATNYDIST 185 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 Y R+ G+ + + +P P ++ MD+ G+ KGCY+GQE+ R H Sbjct: 186 ADEYKLHRMLLGVPEGPEEIVPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 245 Query: 201 RKRPMIIT---------------GTDDLPPSGSPILTD-------------DIEIGTLGV 232 RKR + I P S IL++ IG + Sbjct: 246 RKRILPIHLIPLDSSLKIFDVLNSPVQTPIEDSNILSEIIYHPPRSSAIRKTRSIGKVLA 305 Query: 233 VVGKKALAIARIDKVD 248 + L + R++ + Sbjct: 306 LHNTVGLGLVRLEMAE 321 >gi|260548872|ref|ZP_05823094.1| glycine cleavage T protein [Acinetobacter sp. RUH2624] gi|260408040|gb|EEX01511.1| glycine cleavage T protein [Acinetobacter sp. RUH2624] Length = 240 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 29/249 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + KI Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + Y S + + Q + V +HT +S+ Sbjct: 58 NAESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGV--VFPKVVNDHTEFSST------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + + I G P + + G++ Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPSPATQLHNDVEVVNSTQTTDGYIALV 211 Query: 241 IARIDKVDH 249 +A+ + Sbjct: 212 VAKPAALAE 220 >gi|325123348|gb|ADY82871.1| hypothetical protein BDGL_002285 [Acinetobacter calcoaceticus PHEA-2] Length = 240 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 31/244 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + KI Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENTTRYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDER 119 ++F + + + + + + Y S + + Q I V++ E T + Sbjct: 58 NAESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGIVFPKVVNHQTEFTTAE------- 110 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 +DI + + I G T P + + G++ Sbjct: 111 -------------------TDISEWQKQAIMTGQA-WITQTTEHEFQPQELRLHQREGVN 150 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ G AL Sbjct: 151 YDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDVEVVNSIANDEGYLAL 210 Query: 240 AIAR 243 +A+ Sbjct: 211 VVAK 214 >gi|262369241|ref|ZP_06062569.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315309|gb|EEY96348.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 240 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 31/250 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + I G A+ FLQ +T +V L + +AI +G+I ++K Sbjct: 1 MSDLAFSSFTLI---GVDALKFLQGQVTVNVEALAENTTQYTAICDLKGRIHFGLWLTKR 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + F + + + + + + S + +E P+ V ++ Q+ T ++ Sbjct: 58 NPEHFEIVTTQDQSEEFAKHIKKFGAFSKMKLE--PVGSVFPTFTQDRTTFSAE------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGIS 179 +DI + I HG + D +F P + + G+ Sbjct: 110 -----------------PTDIAAWQVQAITHG--EAFIDQSIEHMFQPQELRLHQRGGVH 150 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQEV++R+ + + +I GT P + + + + G AL Sbjct: 151 YDKGCYLGQEVIARLWFKAKPKAWLHLIQGTGSAPAQAEQLNKGIQVVNSAAIDGGYIAL 210 Query: 240 AIARIDKVDH 249 +AR + + Sbjct: 211 VVARPESLTE 220 >gi|290996284|ref|XP_002680712.1| predicted protein [Naegleria gruberi] gi|284094334|gb|EFC47968.1| predicted protein [Naegleria gruberi] Length = 448 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 131/341 (38%), Gaps = 77/341 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT-----------LPYKIARGSAILTPQGKILLYF 55 S +S + V G+ + F+ +++T+DV LP ++ S L+P+G++L Sbjct: 106 SKRSVVTVEGEHSDSFIHSLVTSDVSKKLIVRDETKKNLPTHSSQPSLFLSPKGRVLFDA 165 Query: 56 LIS-KIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------- 93 ++S + E D +E + S+ + L + L + LR V IE Sbjct: 166 ILSVEFESDGSLKNNRKIYIEHEASQTEHLYNYLKSHVLRKKVKIEKFSNNFQSTTTTTS 225 Query: 94 IQPINGVVLSWNQEHTFSNS------------SFIDERFSIADVLLHRTWGHNEKIA--- 138 PI V + + S D R ++ + + E+ Sbjct: 226 EGPIVKVFALFGNKILKSRKPDLQYKWKDSVVCVKDPRIPTLGYRIYGFFSNQEQYEQFK 285 Query: 139 ---------------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + Y +R+ GI + + D + FP ++ + + GI KG Sbjct: 286 HDVSAELSKKLLVDTESAEYYERIRLLSGIAENSVDIPSDSAFPMESGFEQIGGIHFGKG 345 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD--------IEIGTLGVVVG 235 CY+GQE+ +R HR IRKR +II G D LP +GS + + G + Sbjct: 346 CYVGQELTNRTFHRGEIRKRIVIIKG-DKLPEAGSDLQFTGSNTEELRSDKAGRMCSRDE 404 Query: 236 KKALAIARIDKV---DHAIKKGMALTVHGV--RVKASFPHW 271 + LA + + + D ++ + G +K P+W Sbjct: 405 QVGLATVKFEPLLEKDSTLELSFTNSQDGSTNTLKIVPPYW 445 >gi|149910165|ref|ZP_01898811.1| aminomethyltransferase-like protein [Moritella sp. PE36] gi|149806751|gb|EDM66715.1| aminomethyltransferase-like protein [Moritella sp. PE36] Length = 328 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 36/248 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + G+ + +LQ +T D++ L + P+GK+ F ++K D+F Sbjct: 23 LSHWGLMTATGEQRLSYLQGQLTCDLVGLEDQQTTWGGHCDPKGKLWSTFQVAKKG-DSF 81 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP----INGVVLSWNQEH-------TFSNSS 114 + + + +L Y + S + + + G+ + ++ T + Sbjct: 82 YFIMRKDALAITLPELKKYAVFSKIELTDASAFCNLYGIAGAQAEQWLNKTFAITLGEEA 141 Query: 115 FI-------------DERF----SIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDP 156 RF +D L + H + A+D + L I Sbjct: 142 VTHLPNGFVMRLIGDTPRFLVLLQKSDASLQQISQHLAEAATDDGSFWDALDILAAAPIV 201 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + S P + +GIS TKGCY GQE V+R ++R ++ I++G + Sbjct: 202 GA-TMSSVQIPQAFNLQAYDGISFTKGCYTGQETVARAKYRGTNKRAMAILSG-----AT 255 Query: 217 GSPILTDD 224 + + + D Sbjct: 256 ATEVNSGD 263 >gi|110834505|ref|YP_693364.1| hypothetical protein ABO_1644 [Alcanivorax borkumensis SK2] gi|110647616|emb|CAL17092.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 315 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 32/293 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + D ++ Sbjct: 28 DHLAIIRAHGEEAGHYLQGQLSCDLREVDNGGHLTGMHLSLKGRGLVSVRIVRDGND-YL 86 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNSSFIDE----- 118 + + +++I L+ Y+LR+ V ++ I G+ + S ++ Sbjct: 87 MLCPAGQSEAVIKSLMKYRLRAKVEFQVDNQAVILGLSGALPGALPQPGQSTRNDQGLWL 146 Query: 119 RFSIADVLL----------HRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIF 166 R+ D L E+ A + + I+ G +V P + Sbjct: 147 RYPNTDHALLITHTEQAEAVWAAQAQERTALNGNGWRLADIDAGEGMVYPGAE---DLFL 203 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPILTDD 224 P D+ G++ KGCY GQEVV+R+ + +++R + T DL P + ++ Sbjct: 204 PQVLNYDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRVDYTADMDLTPGETLRDSNG 263 Query: 225 IEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 G + G AL + R + K L + + P +K Sbjct: 264 KAAGEVVSSARTPAGHSALVVLRRNTDGVLFKDAEPLNSQLGTLPYTLP--WK 314 >gi|92113953|ref|YP_573881.1| glycine cleavage T protein (aminomethyl transferase) [Chromohalobacter salexigens DSM 3043] gi|91797043|gb|ABE59182.1| glycine cleavage T protein (aminomethyl transferase) [Chromohalobacter salexigens DSM 3043] Length = 348 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 30/262 (11%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L S +++ G A FLQ +A V A +A +P+G++L + ++E Sbjct: 38 ALAPLPQFSIMEIAGADAERFLQGQTSAQVTLANGDFAPLTAFCSPKGRMLANGQLMRLE 97 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNS 113 E + L +D + L ++L Y V I + + T Sbjct: 98 EGRYWLLLDSELIEPLHEQLAKYAAFYKVEISQPAVRTFGVMGRDAADRLESHFTTAPPE 157 Query: 114 SFIDERFSIADVLLHR-----------------TWGHNEKIASDI--KTYHELRINHGIV 154 ++ +R A +L H W + + + + I G+ Sbjct: 158 TWGMQRVGQAVLLRHPGPVARYMVIAPEATALEAWQSLQPTTTAVGNAVWRLHDIQAGLA 217 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDL 213 + P + L GIS KGCY GQEVV+R R ++KR + L Sbjct: 218 WLGA-AQRDSYLPQMLNWEALAGISFRKGCYTGQEVVARAHFRGQVKKRLQRGRLASHVL 276 Query: 214 PPSGSPIL-TDDIEIGTLGVVV 234 P G+P+ T G + Sbjct: 277 PAPGTPVEDTAGKSQGEVLSAA 298 >gi|52696236|pdb|1VLY|A Chain A, Crystal Structure Of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli At 1.30 A Resolution Length = 338 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 98/277 (35%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + + + G + + Q +TADV +A +GK + + Sbjct: 31 LTLXTLDDWALATITGADSEKYXQGQVTADVSQXAEDQHLLAAHCDAKGKXWSNLRLFRD 90 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 91 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 149 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L + G E ++ + + L I Sbjct: 150 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANXLTDKLRGEAE--LNNSQQWLALNIE 207 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE V+R + R ++ ++ G+ Sbjct: 208 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGS 266 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + +++ G G LA +++ Sbjct: 267 ASRLPEAGEDL---ELKXGENWRRTGTV-LAAVKLED 299 >gi|47168424|pdb|1NRK|A Chain A, Ygfz Protein Length = 328 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 98/277 (35%), Gaps = 39/277 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + + + G + + Q +TADV +A +GK + + Sbjct: 22 LTLXTLDDWALATITGADSEKYXQGQVTADVSQXAEDQHLLAAHCDAKGKXWSNLRLFRD 81 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101 + +E RS R+ + +L Y + S V I ++ Sbjct: 82 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 140 Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + T ERF + A+ L + G E ++ + + L I Sbjct: 141 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANXLTDKLRGEAE--LNNSQQWLALNIE 198 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + P + L GIS KGCY GQE V+R + R ++ ++ G+ Sbjct: 199 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGS 257 Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 LP +G + +++ G G LA +++ Sbjct: 258 ASRLPEAGEDL---ELKXGENWRRTGTV-LAAVKLED 290 >gi|308048403|ref|YP_003911969.1| folate-binding protein YgfZ [Ferrimonas balearica DSM 9799] gi|307630593|gb|ADN74895.1| folate-binding protein YgfZ [Ferrimonas balearica DSM 9799] Length = 294 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 92/257 (35%), Gaps = 27/257 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LSN I+ G +LQ +T +++ L P+GK++ F +++I Sbjct: 8 TLVPLSNLGVIRAVGPDTQSYLQGQLTCNLVKLAPDAWTWGGHCDPKGKLITAFRLTRI- 66 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111 ED ++ + + + + + L Y + + V I + V ++ + Sbjct: 67 EDGVLMLMPKGQLNQDLPALNKYAVFNKVEISDASADYKVYGLLGQNALALLPGEGSVRA 126 Query: 112 ---NSSFIDERFSI----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + ID ++ AD L + A + + I G + Sbjct: 127 LEGGVALIDGERAVVVMAADASLPEALAALPQEAEAL--WIASEIEAGRP-WFDEAQCLE 183 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 P +D + GI KGCYIGQE V+R+ R ++ + G P G + Sbjct: 184 FVPQMLNLDAIGGIQYDKGCYIGQETVARMHFRGGNKRAMYALCG---APAEGDLQMQLG 240 Query: 225 ---IEIGTLGVVVGKKA 238 GTL Sbjct: 241 ENWRRAGTLVAEADWGG 257 >gi|87118920|ref|ZP_01074819.1| Glycine cleavage T protein [Marinomonas sp. MED121] gi|86166554|gb|EAQ67820.1| Glycine cleavage T protein [Marinomonas sp. MED121] Length = 301 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 30/259 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + +K+ G + FLQ + D L A+ +G+++ F + +D + Sbjct: 21 NDLACLKLSGADTVKFLQGQTSCDFSALSQTQGLQGAVCNIKGRVIANFYALQQADD-IL 79 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADV 125 L + ++L L Y + + + E+ FS I E F Sbjct: 80 LILASDLVETLQSHLKKYAVFFK-----TALVNATQDYQIEYIFSQDKLIPQEDFPYPCQ 134 Query: 126 LLHRTWGHNEKIASDIKTYHELR-----INHGIVDPNTDFL---------------PSTI 165 L + +++ Y +R G+ D N + + Sbjct: 135 ELEHNHSLIQICEANVNQYLSIRPTQSSRALGLPDLNDELIGLNLISGHAIINKETSEKF 194 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGSPILTD 223 P M +G++ KGCY GQE+V+R+Q+R ++K + + + D+P D Sbjct: 195 IPQMLNMQFTHGVNFKKGCYTGQEIVARMQYRGNLKKHLYLFSAANTLDIPVLAKLTNQD 254 Query: 224 DIEIGTLGVVVGKKALAIA 242 E+ + K A Sbjct: 255 GKEVAEVITSS-KLGKAYL 272 >gi|169794833|ref|YP_001712626.1| hypothetical protein ABAYE0658 [Acinetobacter baumannii AYE] gi|213157840|ref|YP_002320638.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057] gi|215482380|ref|YP_002324562.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii AB307-0294] gi|301345760|ref|ZP_07226501.1| hypothetical protein AbauAB0_05935 [Acinetobacter baumannii AB056] gi|301511540|ref|ZP_07236777.1| hypothetical protein AbauAB05_08168 [Acinetobacter baumannii AB058] gi|301596697|ref|ZP_07241705.1| hypothetical protein AbauAB059_12802 [Acinetobacter baumannii AB059] gi|332852287|ref|ZP_08434092.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150] gi|332870510|ref|ZP_08439274.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113] gi|169147760|emb|CAM85623.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|213057000|gb|ACJ41902.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057] gi|213986407|gb|ACJ56706.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii AB307-0294] gi|332729417|gb|EGJ60757.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150] gi|332732247|gb|EGJ63515.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113] Length = 240 Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 29/243 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + K Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + L + Y S + + Q V HT +S+ Sbjct: 58 NAESFDIIVTQDQAEELAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + + I G P + + G++ Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211 Query: 241 IAR 243 +A+ Sbjct: 212 VAK 214 >gi|90580316|ref|ZP_01236123.1| hypothetical protein VAS14_20331 [Vibrio angustum S14] gi|90438618|gb|EAS63802.1| hypothetical protein VAS14_20331 [Vibrio angustum S14] Length = 327 Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 35/273 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + + + G + +LQ +T D+++L + +A +GK+ I I Sbjct: 24 LALSKLDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVMRIFHI 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---D 117 + L+ ++ + I +L Y + S I + LS Q + ++ F D Sbjct: 84 DNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVVLGLSGEQAQSAIDNYFTGSDD 142 Query: 118 ERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157 R + + H E +A +D ++ I + + Sbjct: 143 VRHNDTATAVKVDNLRWFIITPIEHAEAVAQHFAANATLTDTALWNLYDIKAALPRVEAA 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216 T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P + Sbjct: 203 TEL---EFIPQAMNLQSVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259 Query: 217 GSP----ILTDDIEIGTLGVVV---GKKALAIA 242 G + + + GT+ ++ALA+ Sbjct: 260 GDALERSVGENWRKGGTVITGYQFNDQQALALV 292 >gi|294624876|ref|ZP_06703533.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665039|ref|ZP_06730346.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600835|gb|EFF44915.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605196|gb|EFF48540.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 273 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 16/260 (6%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 4 VRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPD 63 Query: 72 SKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + +L + R + I + G + + + L Sbjct: 64 GNAAEIATQLSRFVFRRKLKIVTATLFAYGGFAAPEHAHAARAEIGTQRIELDLGSAALP 123 Query: 129 RTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 RT ++ S + + G+ + P +D L S+ Sbjct: 124 RTLLLYSADALATPIELPSADAQWRTTDLQLGLARL-VEGQREQWTPQQLALDRLQAYSV 182 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY GQE+V+R KR + + T +G + D IGT+ V G ALA Sbjct: 183 KKGCYPGQEIVARTHFLGKA-KRALQLLETGAAVNAGDAVALDGSAIGTVVSVAGNLALA 241 Query: 241 IARIDKVDHAIKKGMALTVH 260 + ++ + G AL Sbjct: 242 VLPLELT---LDAGTALQAG 258 >gi|299768868|ref|YP_003730894.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1] gi|298698956|gb|ADI89521.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1] Length = 240 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 29/243 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + KI Sbjct: 1 MSLLAFSSYAL---NGIDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + + S + + S + +F Sbjct: 58 NPESFEIVVAQDQAEEFAKHIKKFGAFSKMTL------------------SEQGAVFPKF 99 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + H+T +DI + + I G T P + + G++ Sbjct: 100 -----VNHQT--EFSTTETDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDIEVVNSIANDQGYLALV 211 Query: 241 IAR 243 +A+ Sbjct: 212 VAK 214 >gi|330502433|ref|YP_004379302.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01] gi|328916719|gb|AEB57550.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01] Length = 313 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 39/300 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + A TP+G++L F I + +D Sbjct: 8 TLLDHEGLLAVRGADAAKFLQGQVTCNLNYLSASQSSLGARCTPKGRMLSSFRIVPV-DD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVV------LSWNQE 107 ++L + R +S L Y + S V + + V+ L + Sbjct: 67 GYLLAMARELIESQQADLQKYAVFSKSKLSDESAAWVRFGLAGGDAVLGELGLQLGTASD 126 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 S I R S L E++ + + + ++ G+ Sbjct: 127 SITSAGPLIAVRLSDGRAELWAPAAETEQLQGRLAAALPQAPLNDWLLAQVRAGVGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217 P + L G+S KGCY GQE+V+R+Q+ +++R + +LP G Sbjct: 186 GATRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLHRLRLVGSELPAVG 245 Query: 218 SPILTD--DIEIGTL--GVVVGK--KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 + + +G + G + LA+ + D V+ +G LT+ + + Sbjct: 246 IELFSPVHGSSVGEVVLAAQAGDAIELLAVLQEDAVNDGRIHLGSSEGPTLTLLDLPYQL 305 >gi|239501762|ref|ZP_04661072.1| hypothetical protein AbauAB_05561 [Acinetobacter baumannii AB900] gi|260557200|ref|ZP_05829416.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606] gi|260409306|gb|EEX02608.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606] Length = 240 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + K Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + Y S + + Q V HT +S+ Sbjct: 58 NAESFDIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + + I G P + + G++ Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211 Query: 241 IAR 243 +A+ Sbjct: 212 VAK 214 >gi|184159392|ref|YP_001847731.1| aminomethyltransferase related to GcvT [Acinetobacter baumannii ACICU] gi|332876232|ref|ZP_08444007.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059] gi|183210986|gb|ACC58384.1| predicted aminomethyltransferase related to GcvT [Acinetobacter baumannii ACICU] gi|322509304|gb|ADX04758.1| aminomethyltransferase [Acinetobacter baumannii 1656-2] gi|323519331|gb|ADX93712.1| GcvT-like aminomethyltransferase [Acinetobacter baumannii TCDC-AB0715] gi|332735504|gb|EGJ66556.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059] Length = 240 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + K Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + Y S + + Q V HT +S+ Sbjct: 58 NAESFEIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + + I G P + + G++ Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDSPAPATQLHNDVEVVNSTQTTDGYIALV 211 Query: 241 IAR 243 +A+ Sbjct: 212 VAK 214 >gi|226328252|ref|ZP_03803770.1| hypothetical protein PROPEN_02145 [Proteus penneri ATCC 35198] gi|225202985|gb|EEG85339.1| hypothetical protein PROPEN_02145 [Proteus penneri ATCC 35198] Length = 339 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 96/268 (35%), Gaps = 37/268 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V L S I G + +LQ +T D+ LP +A +GK+ + Sbjct: 30 LTLVSLDEWSLITATGADSEKYLQGQLTTDIAALPTTTHTLAAHCEAKGKMWSTLRLFHQ 89 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------------IQ 95 +E + + ++ + +L Y + S V + I Sbjct: 90 QEGFAYI-LRKNVAQKQLAELKKYAVFSKVTLAENTDSVLLGLAGQGAALALADYFPNIP 148 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGI 153 V++ + + ERF I + + S+ + + L I G Sbjct: 149 RKANEVVNHDNTYIL-QLPLPTERFLIVTDEETAKNLVATLKAETSNSEQWLALDIEAGY 207 Query: 154 VDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211 +T + P + L I KGCY GQE+VSR + R ++ +++G Sbjct: 208 PIIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGGT 266 Query: 212 DLPPSGSPI---LTDDI--EIGTLGVVV 234 +LP G I L +D + GT+ V Sbjct: 267 ELPEIGGSIEWQLGEDKWRKTGTVLSAV 294 >gi|308446327|ref|XP_003087152.1| hypothetical protein CRE_18393 [Caenorhabditis remanei] gi|308260738|gb|EFP04691.1| hypothetical protein CRE_18393 [Caenorhabditis remanei] Length = 240 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 29/249 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + I G AI FLQ +T +V L I + +AI +G+I + KI Sbjct: 1 MSDLAFSSFTLI---GVDAIKFLQGQVTVNVEALAENITQYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + + + + + + Y S + +E V + N T +++ Sbjct: 58 NPEHLEIVTTQDQAEEFAKHIKKYGAFSKMKLE--ETGRVFPTLNGSTTDFSTT------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + I G N + P + + GI+ Sbjct: 110 -----------------ETDISVWQIAAIQTGQAYINQ-AIEHVFQPQELRLHQREGINY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQEV++R+ + + +I GT P + + + G AL Sbjct: 152 DKGCYLGQEVIARLWFKAKPKAWLHVIQGTGPAPAQAEQLNKGVQVVNSATFENGYIALV 211 Query: 241 IARIDKVDH 249 +AR D ++ Sbjct: 212 VARPDALEE 220 >gi|330828471|ref|YP_004391423.1| aminomethyltransferase [Aeromonas veronii B565] gi|328803607|gb|AEB48806.1| aminomethyltransferase [Aeromonas veronii B565] Length = 302 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 18/232 (7%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+ + ++ G+ + +LQ +T DV L P+GK+ F + +++ Sbjct: 16 SLTKLAITRISGQDRVKYLQGQVTCDVNALQPGQQTAGGHCDPKGKLWSNFRLLCLDDSL 75 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFSI 122 + S + + +L + + S V I G+ + + + + Sbjct: 76 LL-LTSPSVLERQLPELKKFAVFSKVEIAADERHATGIAGTGSDAWIAAQFGLLQSGLID 134 Query: 123 AD---------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 LL + D + L I G+ P + Sbjct: 135 GGMAVKIEQDRWLLVSNQQADALPQGDESLWWGLEIKAGLPHMEA-VHQGEFIPQMLNLQ 193 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 L+GIS KGCY+GQE V+R ++R + ++ GT +G P+ + D Sbjct: 194 ALDGISFNKGCYMGQETVARAKYRGANNRALFLLAGT-----TGEPVASGDT 240 >gi|293611027|ref|ZP_06693326.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826679|gb|EFF85045.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 240 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 31/244 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + K+ Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKM 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDER 119 ++F + + + + + + Y S + + Q + V++ E T + Sbjct: 58 NPESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGAVFPKVVNHQTEFTTAE------- 110 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 +DI + + I G T P + + G++ Sbjct: 111 -------------------TDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVN 150 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ AL Sbjct: 151 YDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDVEVVNSIANDESYLAL 210 Query: 240 AIAR 243 +A+ Sbjct: 211 VVAK 214 >gi|169632509|ref|YP_001706245.1| hypothetical protein ABSDF0627 [Acinetobacter baumannii SDF] gi|169151301|emb|CAP00005.1| conserved hypothetical protein [Acinetobacter baumannii] gi|193078266|gb|ABO13230.2| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978] Length = 240 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + K Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + Y S + + Q V HT +S+ Sbjct: 58 NAESFDIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + + I G P + + G++ Sbjct: 110 -----------------ETDISEWQKQAIVTGQA-WIAQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211 Query: 241 IAR 243 +A+ Sbjct: 212 VAK 214 >gi|188576489|ref|YP_001913418.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520941|gb|ACD58886.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 268 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 101/265 (38%), Gaps = 14/265 (5%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPDGNAA 62 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FSIADVLLHRTWG 132 + +L + R + I + E + + + + + L RT Sbjct: 63 EIAAQLGRFVFRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLDLGSAALPRTLL 122 Query: 133 --HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 E +A+ I+ + + G+ + P +D L S+ KGC Sbjct: 123 LYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ + Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSVAGNLALAVLPL 240 Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269 + A A HG R +A P Sbjct: 241 ELTLDADTPLQA-GAHGARPRAIAP 264 >gi|294634850|ref|ZP_06713372.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685] gi|291091723|gb|EFE24284.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685] Length = 344 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 93/274 (33%), Gaps = 36/274 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L++ + V G A +LQ +T DV L + A +GK+ + + Sbjct: 33 LTLMALTDWQLVGVSGADAQSYLQGQLTLDVPALTAQQHALCAHCDAKGKLWSTLRLWRR 92 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + L + RS + + +L Y + S V + +P + +VL + Sbjct: 93 ADGFAYL-LRRSVAEIQLLELKKYAVFSKVTLADEP-HAIVLGLAGAQAREALGELFSEL 150 Query: 121 SIADVLLHRTWG------------------------------HNEKIASDIKTYHELRIN 150 A L + SD + L I Sbjct: 151 PDAACPLRQAAHSQLLFLAEPQPRYLLICDDEDEAKRIIQQLSGRARLSDGAQWLALDIE 210 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + P + L GI KGCY GQE+V+R + R R+ + G+ Sbjct: 211 AGLA-IIDEASSDQFLPQAINLQALGGICFNKGCYSGQEMVARAKFRGANRRALFWLRGS 269 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 P S L ++ +G G LA R+ Sbjct: 270 AGRLPHASEDL--ELRLGDSWRRSGTV-LAALRL 300 >gi|33596201|ref|NP_883844.1| hypothetical protein BPP1557 [Bordetella parapertussis 12822] gi|33601612|ref|NP_889172.1| hypothetical protein BB2635 [Bordetella bronchiseptica RB50] gi|33573204|emb|CAE36859.1| conserved hypothetical protein [Bordetella parapertussis] gi|33576049|emb|CAE33128.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 338 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 45/285 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI- 60 L++ I G A+ FL +T DV P AR + T +G++L ++ + Sbjct: 17 QCAPLASLRVIGAAGADALAFLHGQLTQDVTGQPADHARLAGYCTAKGRLLATLVMWRAA 76 Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------- 102 + + ++++ +L + LR+ + P + Sbjct: 77 AADESAPVWQALVRADVAEAVLKRLSMFVLRAKARLAPVPAWAAGVQCAPAALAALQDAA 136 Query: 103 ------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI----------ASDIKTYHE 146 + Q ++I + A + + + Sbjct: 137 GGALPAAPWQRAELPTGTWIGAPSADAQPRWWWIATEAQLERAGALAAHLGRASESAWQA 196 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-- 204 + G+ P +DL+ G+S TKGCY GQEVV+R +R +++R Sbjct: 197 ADLAAGLPWIGA-ATQDVFIPQTVNLDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAH 255 Query: 205 -MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKK----ALAIA 242 +I DLP G I G VV LA+ Sbjct: 256 GVIAEAPADLPDPLAGQDIYDSARPDEPCGRVVDAARSDGQLALL 300 >gi|159481016|ref|XP_001698578.1| hypothetical protein CHLREDRAFT_187731 [Chlamydomonas reinhardtii] gi|158282318|gb|EDP08071.1| predicted protein [Chlamydomonas reinhardtii] Length = 816 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 42/213 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59 +L+++ + G A+ FLQ ++T DV L P + + +LTP+GK L IS+ Sbjct: 47 AHLTSRGVLLAEGPQALTFLQGMVTNDVRPLQTAGPAEPPVYATVLTPKGKFLHDLFISR 106 Query: 60 IEE--DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + D +LE+D + + + L Sbjct: 107 HPDMPDALLLEVDAAGATAAMQLLNK---------------------------------- 132 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +A G A+ + Y R + G+ + + P D +D+L G Sbjct: 133 --PLVAAGPAPAAAGLQSASAAGEEAYRAWRYSLGVAEGEAEIPAGQAAPLDFNVDVLRG 190 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 +S TKGCY+GQE S +R +IRKR M + Sbjct: 191 VSYTKGCYVGQERNSFTHYRGVIRKRLMPVRLE 223 >gi|332284309|ref|YP_004416220.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7] gi|330428262|gb|AEC19596.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7] Length = 348 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 49/249 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ + I++ G A FL ++ D+ +L A + T +G++L ++ + Sbjct: 7 ATSLSDLAVIEISGADAASFLHGQLSHDISSLLPGQAHLAGYCTAKGRLLGSMVVWPVSG 66 Query: 63 ---DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE---------- 107 T I +S++ +L + LR+ + + P+ G+ L+ + + Sbjct: 67 AEVPTLRALIKADIAESVVKRLSMFVLRAKAKLSVTQTPVLGLSLAVDADSRQNIAPAQP 126 Query: 108 ------HTFSNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDI-- 141 + + + + + + +D Sbjct: 127 TGAQAGAILAEQAATLPKNPLPFTVIYTEAGDWISAVGAEGEPVRWWLAAASAVDADYFP 186 Query: 142 -------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + I G+ P +DL++G+S TKGCY GQEVV+R Sbjct: 187 DTGEAGRSAWQAADIAAGLP-WVQAATQDVFIPQTLNLDLIDGVSFTKGCYPGQEVVARS 245 Query: 195 QHRNIIRKR 203 +R +++R Sbjct: 246 HYRGTVKRR 254 >gi|262281154|ref|ZP_06058936.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257385|gb|EEY76121.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 240 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 29/249 (11%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + S+ + G A FLQ +T D L R +AI +G+I + KI Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++F + + + + + + + S + + Q F Sbjct: 58 NAESFEIVVVQDQAEEFAKHIKKFGAFSKMTLSEQG---------------------PAF 96 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + H+T + +DI + + I G T P + + G++ Sbjct: 97 PK--ISGHQT--EFSALETDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVNY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ GT + P + + + D + ++ G AL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPAAKAQLHNDIEVVNSVANEEGYLALV 211 Query: 241 IARIDKVDH 249 +A+ ++ Sbjct: 212 VAKPAALEE 220 >gi|15805387|ref|NP_294081.1| hypothetical protein DR_0358 [Deinococcus radiodurans R1] gi|6458035|gb|AAF09938.1|AE001896_3 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 303 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 108/292 (36%), Gaps = 37/292 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + +V G F+ +T D+ P A L +G+I + + +D Sbjct: 18 TRLPSSGL-RVTGADRTDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRRPDD 76 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE---- 118 L +D + L +L Y + V +E + + V W+Q + + Sbjct: 77 -IYLHLDAGQAPLLAARLRRYIIFDQVELEDVSEVLRTVHVWDQAVPGWDDAGAGAQQWT 135 Query: 119 ------------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTD 159 R V LH E + + + LR+ GI D D Sbjct: 136 LGGSLVLGGRVNRSGQPGVDLHYLARDEEAVLAALGGEERPLSELDALRVAAGIPDIQRD 195 Query: 160 FLPSTIFPHDALMDLLN---GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 L T P + +D+ IS KGCY+GQE+++RI+ R R + G PS Sbjct: 196 GLTGT-LPQEVGLDVSGPLPAISYRKGCYVGQEIMARIEARGQTRFHLARVAGEG--LPS 252 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + I D +G G+ G ALA R + ++ G A+ V GV + Sbjct: 253 HAEIRQGDKVVGQSGLSTGPLALARLRRE-----LEDGAAVEVGGVSARVQL 299 >gi|325917570|ref|ZP_08179770.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937] gi|325536204|gb|EGD08000.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937] Length = 289 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 17/259 (6%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 14 SLHDMQYVRLVGTDAVAFAHAQFANDVQALEIGQWQWNAWLTAKGRVIAIFALLREDDTQ 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---ERFS 121 ++ + K D + +L + R + I ++ Q + + D +R + Sbjct: 74 VLMLLPDGKADEIAAQLGRFVFRRKLKINATRLS--AYGGFQAPDLAKGAHADIGTQRIA 131 Query: 122 I----ADVLLHRTWGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDAL 171 + A V + +A+ I+ + ++ G+V D P Sbjct: 132 LDMGSAAVPRTLLIFSADALAAPIELPNMDAQWRRADLHLGLVRLP-DAQREQWTPQQLA 190 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +D L S+ KGCY GQE+V+R KR + + T+ +G + D IGT+ Sbjct: 191 LDRLQAFSVKKGCYPGQEIVARTHFLGKA-KRALQLLETEAAVQAGDSVELDGAAIGTVV 249 Query: 232 VVVGKKALAIARIDKVDHA 250 V G ALA+ ++ A Sbjct: 250 SVAGDLALAVLPLELTVDA 268 >gi|120555181|ref|YP_959532.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter aquaeolei VT8] gi|120325030|gb|ABM19345.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter aquaeolei VT8] Length = 326 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 104/302 (34%), Gaps = 37/302 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L+++ ++ G F+Q + +V + + +A TP+G+ + + ED Sbjct: 18 AHLTDRVLARISGPGTDKFVQGQFSQNVDEVTSGQSLRAAACTPKGRAYCITRLVRDGED 77 Query: 64 TFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L ++R + + L Y L + + + E + + + Sbjct: 78 -LLLSLERETAEDTVKHLNKYLMLFRGTSLGVLDSGRITGLLGIETARQVAGAATDELTR 136 Query: 123 ADVLLHRTWGHNEKIASD-------------------------IKTYHELRINHGIVDPN 157 +L G+ ++ D ++T+ + G+ Sbjct: 137 PGQVLSTDNGYLIRVEDDSDHCARFELWQTDAQPDLLPSSELSLQTWLASEVRAGVP-WL 195 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPP 215 T P + L GI KGCY GQEV++R+ ++K + GT+ P Sbjct: 196 TAATREAYVPQMLNLQHLQGIHFKKGCYTGQEVIARMHFLGQLKKSLFRVAFNGTEAAPQ 255 Query: 216 SGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDH--AIKKGMALTVHGVRVKASF 268 G+ ++ D +G + V + LA+ R D + L + + Sbjct: 256 PGTRLIADGSAVGEVVNSVLTGEQQGEMLAVIRHDAASKHLGVDGHEGLQLEMRPIPYPV 315 Query: 269 PH 270 P Sbjct: 316 PE 317 >gi|296390892|ref|ZP_06880367.1| hypothetical protein PaerPAb_22175 [Pseudomonas aeruginosa PAb1] Length = 314 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + +L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLAELKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|71279144|ref|YP_270787.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H] gi|118577992|sp|Q47WN5|YGFZ_COLP3 RecName: Full=tRNA-modifying protein ygfZ gi|71144884|gb|AAZ25357.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H] Length = 324 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 30/253 (11%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS I + G+ +LQ +T DV ++ A +GK+ F + Sbjct: 20 LIELSEFGAISLSGEEQSKYLQGQVTCDVNSITESNLLVGAHCDAKGKVFSVFRLINRSS 79 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFID- 117 +L+ + + + +L + + + V I+I G + ++ + S D Sbjct: 80 AHLLLQ-PTASIEGSLKELKKFGVFAKVTIDIAEELGFIALIGKQASSLIQQEFSQVPDS 138 Query: 118 -------------------ERFSIAD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 R+ I D + ++ L I G Sbjct: 139 LTPVVQIGSTSLVYLSGEQPRYIIIDDKATITAITEKLALPTYSQSVWNLLEITQGFPIL 198 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + P + +NGIS TKGCY+GQE V+R+Q+ ++ + + P Sbjct: 199 TAN-TSGHYVPQMLNLQAINGISFTKGCYLGQETVARMQYLGKNKRALFCLNSQLEQPFQ 257 Query: 217 GSPILTDDIEIGT 229 ++ + ++G Sbjct: 258 SDDVI--EKQLGE 268 >gi|313105580|ref|ZP_07791846.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa 39016] gi|310878348|gb|EFQ36942.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa 39016] Length = 314 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + +L Y + S + + + + + I+ Sbjct: 67 GLLLAMAGELLEAQLAELKKYAVFSKASLADESAAWLRVGLRDAGEALRALGIEAPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ G+ Sbjct: 127 RIARHGDLLAVALGDARAELWIPAQRAETVLATLREHSREAPLDDWLLGQVRAGVGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + G D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALGGDEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|89075098|ref|ZP_01161539.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34] gi|89049185|gb|EAR54750.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34] Length = 327 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 106/273 (38%), Gaps = 35/273 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + + + G + +LQ +T D+++L + +A +GK+ I I Sbjct: 24 LALSKLDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVIRIFHI 83 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---D 117 + L+ ++ + I +L Y + S I LS Q + ++ F D Sbjct: 84 DNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVIFGLSGEQAQSAIDNYFTGSDD 142 Query: 118 ERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157 R + + H E +A +D ++ I + + Sbjct: 143 VRHNDTATAVKVDNLRWFIITPMEHAEAVAQHFAANATLTDTALWNLYDIKAVLPRVEAA 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216 T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P + Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259 Query: 217 GSP----ILTDDIEIGTLGVVV---GKKALAIA 242 G + + + GT+ ++ALA+ Sbjct: 260 GDALERSVGENWRKGGTVITGYQFNDQQALALV 292 >gi|78047795|ref|YP_363970.1| putative aminomethyl transferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036225|emb|CAJ23916.1| putative aminomethyl transferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 290 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 101/267 (37%), Gaps = 16/267 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 14 SLHDMQYVRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVIAIFALLREDDAH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-FSNSSFIDERFS-- 121 ++ + + +L + R + I + EH + + +R Sbjct: 74 LLMLLPDGNSAEIAAQLSRFVFRRKLKISAAALLAYGGFVAPEHAHAAQADLGTQRIELD 133 Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + L RT ++ S + + G+ + P +D Sbjct: 134 LGSAALPRTLLLYSPDALAMPIELPSAQAQWRTTDLQLGLARL-VESQREQWTPQQLALD 192 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRVLQLLETDAAVDAGDAVALDGSAIGTVVSV 251 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVH 260 G ALA+ ++ + G AL Sbjct: 252 AGNLALAVLPLELT---LDAGAALQAG 275 >gi|21242812|ref|NP_642394.1| hypothetical protein XAC2074 [Xanthomonas axonopodis pv. citri str. 306] gi|21108298|gb|AAM36930.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 290 Score = 154 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 99/267 (37%), Gaps = 16/267 (5%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++ Sbjct: 14 SLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFS 121 ++ + + +L + R + I I + G + + Sbjct: 74 LLMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELD 133 Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + L RT ++ S + + G+ + P +D Sbjct: 134 LGSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARL-VEGQREQWTPQQLALD 192 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDAAVDAGDAVALDGSAIGTVVSV 251 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVH 260 G ALA+ ++ + G AL Sbjct: 252 AGNLALAVLPLELT---LDAGTALQAG 275 >gi|257453607|ref|ZP_05618897.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60] gi|257449065|gb|EEV24018.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60] Length = 242 Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 28/248 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + G A FLQ +T +V L + +AI +G++ L I KI +D + Sbjct: 1 MTDFVVFDITGADAQKFLQGQVTCNVTKL-SDQFQATAISNLKGRVALGIWIKKIADDAY 59 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + I + D + Y S + + P + + N +FS S Sbjct: 60 QIVISQDCADEFAKHIKKYAAFSKLTLS-APRDIFAVIDNGVSSFSES------------ 106 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHG---IVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + D K + + I G IV P + + G+ K Sbjct: 107 ------ENGTDTDVDRKAWQKASIATGNYWIVKTTAGLWQ----PQELRLHQQGGVDYDK 156 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 GCY+GQE+++R+ + + + GT D+P +G I + D+ + ++ G +AL +A Sbjct: 157 GCYLGQEIIARLYFKASPKAWLHRVAGTGDIPNAGEKIGSVDV-VNSIATDTGFEALVVA 215 Query: 243 RIDKVDHA 250 R D + + Sbjct: 216 RPDDIAAS 223 >gi|254239121|ref|ZP_04932444.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254245013|ref|ZP_04938335.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126171052|gb|EAZ56563.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126198391|gb|EAZ62454.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 314 Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|107100219|ref|ZP_01364137.1| hypothetical protein PaerPA_01001242 [Pseudomonas aeruginosa PACS2] Length = 314 Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLTDESAAWLRIGLRDASEALRALGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|149374722|ref|ZP_01892496.1| predicted aminomethyltransferase [Marinobacter algicola DG893] gi|149361425|gb|EDM49875.1| predicted aminomethyltransferase [Marinobacter algicola DG893] Length = 332 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 40/292 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V +S++ +++ G FLQ + + + + +A TP+G+ + + + Sbjct: 18 YVSVSDRVMVRITGPGTNKFLQGQFSQQIDDVTQDHSPRAAACTPKGRAYCLTRLVRDGD 77 Query: 63 DTFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPIN-------------------GVVL 102 D ++E+ + + + L Y L +EI+P G + Sbjct: 78 D-VLMELPAALSEGTVTHLRKYLMLFRGTSMEIEPDARILGLLGEAAAEKLLPGNTGALA 136 Query: 103 SWNQEHTFSNSSFI---DERFSIADVLLHRTWGHN--------EKIASDIKTYHELRINH 151 + + I D +A L +T G + + A+ + + I Sbjct: 137 AAGDSVKINGGHLIRTMDTAEGMARYELWQTGGLDTSLQQSLKDLPAAPLADWQASEIAA 196 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ T + P + GI KGCY GQEV++R+ ++K T +D Sbjct: 197 GVASLTT-ATTESFVPQMLNWQHVGGIHFKKGCYTGQEVIARMHFLGQLKKSLFRFTCSD 255 Query: 212 D--LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMA 256 LP G +L + +G + V + LA+ R D + ++ A Sbjct: 256 AGSLPAPGEALLDGERAVGNVVNSVHFSDGHSEILAVVRHDAAEKSLVPESA 307 >gi|15595956|ref|NP_249450.1| hypothetical protein PA0759 [Pseudomonas aeruginosa PAO1] gi|9946647|gb|AAG04148.1|AE004511_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 314 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDGRVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|218893298|ref|YP_002442167.1| hypothetical protein PLES_45841 [Pseudomonas aeruginosa LESB58] gi|218773526|emb|CAW29338.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 314 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLTDESAAWLRIGLRDASEALRTLGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|33592903|ref|NP_880547.1| hypothetical protein BP1845 [Bordetella pertussis Tohama I] gi|33572551|emb|CAE42131.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332382316|gb|AEE67163.1| hypothetical protein BPTD_1822 [Bordetella pertussis CS] Length = 338 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 45/285 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--- 58 L++ I G A+ FL +T DV P AR + T +G++L ++ Sbjct: 17 QCAPLASLRVIGAAGADALAFLHGQLTQDVTGQPADHARLAGYCTAKGRLLATLVMWLAA 76 Query: 59 --KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------- 102 + + ++++ +L + LR+ + P + Sbjct: 77 AADESAPVWQALVRADVAEAVLKRLSMFVLRAKARLAPVPAWAAGVQCAPAALAALQDAA 136 Query: 103 ------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI----------ASDIKTYHE 146 + Q ++I + A + + + Sbjct: 137 GGALPAAPWQRAELPTGTWIGAPSADAQPRWWWIATEAQLERAGALAAHLGRASESAWQA 196 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-- 204 + G+ P +DL+ G+S TKGCY GQEVV+R +R +++R Sbjct: 197 ADLAAGLPWIGA-ATQDVFIPQTVNLDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAH 255 Query: 205 -MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKK----ALAIA 242 +I DLP G I G VV LA+ Sbjct: 256 GVIAEAPADLPDPLAGQDIYDSARPDEPCGRVVDAARSDGQLALL 300 >gi|116048674|ref|YP_792526.1| hypothetical protein PA14_54480 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583895|gb|ABJ09910.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 314 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + +G++L F I E D Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 +L + ++ + L Y + S + + + + + ID Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126 Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158 R + LL G + + + ++ GI Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLARLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217 P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245 Query: 218 SPILTD--DIEIGTL 230 + + + +G + Sbjct: 246 TGLFSPVHSTSVGEV 260 >gi|114777736|ref|ZP_01452696.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus ferrooxydans PV-1] gi|114551952|gb|EAU54486.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus ferrooxydans PV-1] Length = 318 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 38/288 (13%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N S +K G + +LQ IT D+ L A +A+LTPQGK + I + D IL Sbjct: 27 NWSVLKASGPTVRDYLQGQITQDMNRLSADCAIHTALLTPQGKAVTELYIIEGNNDELIL 86 Query: 68 EIDRSKRDSLIDKLLFYK----LRSNVI--IEIQPINGVVLSWNQEHTFSNSS----FID 117 S + + +L + LR V+ + I + G E Sbjct: 87 LTPASYATATVARLRQFALGQELRIGVVEALAICSLQGTHAHSQLESFALPEPDEMWLAT 146 Query: 118 ERFSIAD----VLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTDF 160 R D V+ H G+ + + + + +RI G D ++ Sbjct: 147 SRNPETDCFAIVMPHHPRGYWVVTAATSIRAVVSRQPEVEQNAFEAMRIIRGFPDFGIEW 206 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 + I P +A + +G+S KGCY+GQEV SR+ R I+K+ ++ PI Sbjct: 207 -DAAIHPLNANLVEFDGVSFEKGCYVGQEVTSRMHWRGGIKKKLYRVSVDGRPDTLPCPI 265 Query: 221 LTDDIEIGTLGVVVGKK-----ALAIARIDKVDHA----IKKGMALTV 259 T + IG L + +A+ I+ + A ++ G L V Sbjct: 266 RTS-VNIGELKSAAIDQENRCIGIALLPIETAESATALSLENGATLHV 312 >gi|77359673|ref|YP_339248.1| transcriptional regulator [Pseudoalteromonas haloplanktis TAC125] gi|76874584|emb|CAI85805.1| putative one-carbon metabolism transcriptional regulator, COG 354, highly conserved in phylogeny [Pseudoalteromonas haloplanktis TAC125] Length = 303 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 94/243 (38%), Gaps = 43/243 (17%) Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 MS V+ LS+ I G + +L IT D+ L + + +GK+ F + Sbjct: 1 MSIVHACALSH-QLISFSGADKLSYLHGQITQDINKLTNNNYLWAGHCSAKGKLWGVFKL 59 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----------------INGV 100 +D + L +++ + + +L Y + + V I + P +N Sbjct: 60 F-SHQDHYYLIGSKAEVECSLAELKKYAVFAKVDINVAPQRLIGLISDDFTELLTQLNIE 118 Query: 101 VLSWNQEHTFSNSSF-----------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + + FS+ +DE+F++ D ++ + + + I Sbjct: 119 FAAQDTACDFSHGKALKLTGNRLLLMVDEQFNLPDNVV---------TLENDMLWQQAAI 169 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G N + P + ++GIS KGCY GQE V+R+++ ++ I++G Sbjct: 170 LAGEPQLNEQAI-GEYVPQMVNLQAIDGISFKKGCYAGQETVARMKYLGKNKRAMYIVSG 228 Query: 210 TDD 212 D Sbjct: 229 QSD 231 >gi|146306495|ref|YP_001186960.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp] gi|145574696|gb|ABP84228.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp] Length = 313 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 105/279 (37%), Gaps = 34/279 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L A TP+G++L F I + ED Sbjct: 8 TLLDHEGLLAVRGPDAGKFLQGQLTCNLSYLSASQTSLGARCTPKGRMLSSFRIVPV-ED 66 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VII------EIQPINGVVLSWNQE 107 ++L + R + + L Y + S V + G+V + + Sbjct: 67 GYLLAMARELIEPQLADLQKYAVFSKSKLGDESAAWVRFGLSGGDAVLSELGLVPGDHAD 126 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158 S + R V L E + + + + ++ G+ Sbjct: 127 ALASAEGLLAVRLGDGRVELWAAVDKAEHLHAVLSRHLPQAPLNLWLLAQVRAGVGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDLPPSG 217 P + L G+S KGCY GQE+V+R+Q+ + R+ + G ++P +G Sbjct: 186 GATRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLRLGGTEVPSAG 245 Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250 + + + +G + + G + LA+ + D V Sbjct: 246 TELFSPVHASSVGEVVLAAQAEDGVELLAVLQEDAVTDG 284 >gi|325920389|ref|ZP_08182320.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865] gi|325549136|gb|EGD20059.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 13/256 (5%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A+ F A DV L + + LT +G+++ F + + ++ ++ + Sbjct: 4 VRLIGMDAVAFAHAQFANDVQALAVGQWQWNTWLTAKGRVIAIFALLREDDTHVLMLLPD 63 Query: 72 SKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + +L + R + I + G + + ++ + L Sbjct: 64 GNAAEIALQLGRFVFRRKLKIVGAALSAYGGFEPAQRAQGAQADIGTQRIELDMGTAALP 123 Query: 129 RT--WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 RT ++ +A+ I+ + + G+V D P +D L+ S+ Sbjct: 124 RTLLLHTDQALAAPIEVPGVDAQWRRADLQLGLVRLP-DAQREQWTPQQLALDRLHAFSV 182 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY GQE+V+R ++ ++ + +G + D IGTL V G ALA Sbjct: 183 KKGCYPGQEIVARTHFLGKAKRALQLLEVDGAI-EAGDAVTLDGTAIGTLVSVAGTLALA 241 Query: 241 IARIDKVDHAIKKGMA 256 + ++ A A Sbjct: 242 VLPLELTLDATTALQA 257 >gi|294651372|ref|ZP_06728690.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822727|gb|EFF81612.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 240 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 26/231 (11%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A FLQ +T V L +R +AI +G+I I KI ++F L + Sbjct: 10 SLNGVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQD 69 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 + + + + S + +E I V + N T Sbjct: 70 QAEEFAKHIRKFGAFSKMKLE--EIGQVFPTVNGIQT----------------------- 104 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 K +DI + I G T P + + G+ KGCY+GQE+V+ Sbjct: 105 EFSKSETDINAWQIQAIQSGQA-WITQTTEHLFQPQELRLHQREGVHFDKGCYLGQEIVA 163 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 R+ + + +I G + PP + + D + ++ G AL +A+ Sbjct: 164 RLWFKAKPKHWLHLIQGKETTPPPATQLNKDVEVVNSIAFEGGYIALVVAK 214 >gi|254514102|ref|ZP_05126163.1| glycine cleavage T protein [gamma proteobacterium NOR5-3] gi|219676345|gb|EED32710.1| glycine cleavage T protein [gamma proteobacterium NOR5-3] Length = 302 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 31/255 (12%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +L ++ I + G FLQ +T D L IA A+ +G++L L+ ++ + Sbjct: 5 ACFLPKEAMIHLRGSKIPEFLQGQLTCDTRKLSPGIAVMGALCNVKGRVLSDLLVVQVSD 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +L + RS S+ D L Y S + +E ++ + + Sbjct: 65 THVVLRLRRSLATSVADTLRRYAQFSRISVEPDSREDAIVGLRESVVTPTPDALPAGHMA 124 Query: 123 ADVL-----LHRTWGHNEKIASDI--------------------KTYHELRINHGIVDPN 157 A + L RT G +E ++ D LR H V+ Sbjct: 125 ASIRTGTVTLQRTPGLSEILSVDPDNPIDLADTLNERTMDAEPRWAMETLRSGHYAVELE 184 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PP 215 P DL ++ KGCY GQE+V+R+ ++ ++R I + + P Sbjct: 185 D---LGAFTPQALNYDLTGLVAFNKGCYTGQEIVARLHYKGQSKRRLQIFETPESVNGPA 241 Query: 216 SGSPI-LTDDIEIGT 229 +P+ ++ +G Sbjct: 242 RDTPLQTSEGDTVGR 256 >gi|226951689|ref|ZP_03822153.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ATCC 27244] gi|226837554|gb|EEH69937.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ATCC 27244] Length = 240 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 26/231 (11%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A FLQ +T V L +R +AI +G+I I KI ++F L + Sbjct: 10 SLNGVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQD 69 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 + + + + S + +E I V + N T +++ Sbjct: 70 QAEEFAKHIRKFGAFSKMKLE--EIGQVFPTVNGIQTDFSTT------------------ 109 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 +DI T+ I G T P + + G+ KGCY+GQE+V+ Sbjct: 110 -----ETDINTWQVQAIQSGQA-WITQTTEHLFQPQELRLHQREGVHFDKGCYLGQEIVA 163 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 R+ + + +I G + P + + D + ++ G AL IA+ Sbjct: 164 RLWFKAKPKHWLHLIQGKETTPAPATQLNKDVEVVNSIAFDNGYLALVIAK 214 >gi|311693662|gb|ADP96535.1| glycine cleavage T-protein (aminomethyl transferase) [marine bacterium HP15] Length = 331 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 38/303 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L N+ + V G FLQ + ++ + + + +A TP+G+ + + +D Sbjct: 22 ADLDNRVVVCVSGPGTDKFLQGQFSQNLDEVIPEYSPRAAAATPKGRAYCLTRMVRSGDD 81 Query: 64 TFILEIDRSKRDSLIDKLLFY-KLRS----------NVIIEIQPINGVVLSW-------- 104 +++ D +I L Y L + + L+ Sbjct: 82 -ILMDFPAELADDIISHLRKYLMLFRGTTMEVVQETKITGILGNGLAETLAGKPLDSLKE 140 Query: 105 -NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDP 156 T + + + + W + E A+ + I G+ Sbjct: 141 PGDACTLPDGILVKTQSTAEGTPRFEFWHNEEGEAALPASARMSAADWQASEIAAGVASL 200 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLP 214 T + P + G+ KGCY GQEV++R+ ++K I ++DLP Sbjct: 201 TT-ATQESFVPQMLNWQHVGGVHFKKGCYTGQEVIARMHFLGQLKKSLFRFRIEQSEDLP 259 Query: 215 PSGSPILTDDIEIGTLGVVVGKKA-----LAIARIDKVDHAIKKG--MALTVHGVRVKAS 267 G+ + + +G + + + LA+ R D ++A+ +T+ + + Sbjct: 260 TPGTALFAGERSVGEVVNAIKYRDGSVELLAVVRHDAAENALHPEGLSEVTLEPMPLPYP 319 Query: 268 FPH 270 P Sbjct: 320 VPE 322 >gi|302831836|ref|XP_002947483.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f. nagariensis] gi|300267347|gb|EFJ51531.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f. nagariensis] Length = 504 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 96/281 (34%), Gaps = 62/281 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59 L+++ ++ G + FLQ I++ DV L P + + ILTP+GK L + Sbjct: 55 AILASRGVLQAEGSQVLEFLQGIVSNDVRPLLGAGPQQPPTYATILTPKGKFLHDVFLYP 114 Query: 60 IE--EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI 116 E ++++DR ++ + L YKLR + ++ V +W + Sbjct: 115 HPELEGAVLMDVDREGLNAALQLLNRYKLRRPINFRDVSSEYCVAAAWGSNSPPPAGATS 174 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST------------ 164 T + Y LR G+ + + + Sbjct: 175 ----GTTTTTTTTTATTTATTRVSEEEYRLLRYQLGVAEGEKEIPSAEAPFFLIALGPGS 230 Query: 165 -------------------------------------IFPHDALMDLLNGISLTKGCYIG 187 + P D MD L+G+S TKGCY+G Sbjct: 231 LPPRSRAAHSVDVMLHMNTNSIQIILGVSECGEPTCQVAPLDFNMDQLSGVSYTKGCYVG 290 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 QE S +R ++R+R M + + P G +L G Sbjct: 291 QERNSFTHYRGVVRRRLMPVRL--EAPRLGDAVLEAGGSPG 329 >gi|119471895|ref|ZP_01614203.1| putative one-carbon metabolism transcriptional regulator [Alteromonadales bacterium TW-7] gi|119445268|gb|EAW26558.1| putative one-carbon metabolism transcriptional regulator [Alteromonadales bacterium TW-7] Length = 303 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 93/255 (36%), Gaps = 26/255 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ I + G + +L IT D+ L + + +GK+ F + ++ Sbjct: 6 ACPLSH-QLISLTGADKLSYLHGQITQDLNKLTNSNFLWTGHCSAKGKLWGVFKLFSHQD 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 ++ SL++ L Y + + V I + L + T Sbjct: 65 SYYLSGSSAEVEQSLVE-LKKYAVFAKVDISASSNRLIGLIGDDLSTVLTELGIAFDDNI 123 Query: 110 ----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPS 163 F N + + ++++ + + + + + + + I G ++D + Sbjct: 124 IACDFDNGKALKLADNRVLLMVNSQFAIPDSVLTLDNDAPWQQAAILAGEPQLSSDAI-G 182 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--LPPSGSPIL 221 P + + GIS KGCY GQE V+R+++ ++ I++G + L + Sbjct: 183 EYVPQMVNLQAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSESMLDEPELEVQ 242 Query: 222 TDD--IEIGTLGVVV 234 + G L Sbjct: 243 LGENWRRAGKLIAQS 257 >gi|53802555|ref|YP_112775.1| hypothetical protein MCA0240 [Methylococcus capsulatus str. Bath] gi|53756316|gb|AAU90607.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 356 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 32/261 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ I+V G+ A FL +++T DV + + + ++ +G+I F + K Sbjct: 48 ADLSHFGLIEVKGEDAGKFLGSMLTGDVRLVSETLGQFTSWCDGKGRIQATFWLFKRGGA 107 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFS 121 ++L + + +I +L + LR+ I + + LS S+ + R Sbjct: 108 YYLL-LPEALLPGVITRLKMFLLRTKATITDASGTLARIGLSGAGIADTLGSALPEPRGG 166 Query: 122 IADV------------LLHRTWGHNEKIASDIKT-------------YHELRINHGIVDP 156 V S + + L I GI Sbjct: 167 TMSVGDCTLLALGCEPRPRWLAVGTSPAVSALWNKAAASARPAGAGAWALLDILAGIPYV 226 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPP 215 T+ P ++ L G+S KGCY GQEV++R+ +R ++++ + ++P Sbjct: 227 TTE-TAGEFIPQMLDLEALGGLSYKKGCYPGQEVIARLHYRGQLKRKVFLAHADCPEVPA 285 Query: 216 SGSPILTD--DIEIGTLGVVV 234 G+ + D +G + Sbjct: 286 PGTRLHRPGFDESVGLVVSAA 306 >gi|325928378|ref|ZP_08189573.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118] gi|325541254|gb|EGD12801.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118] Length = 273 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 16/260 (6%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 4 VRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVISIFALLREDDAHLLMLLPD 63 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-FSNSSFIDERFSI--ADVLLH 128 + +L + R + I + EH + + +R + L Sbjct: 64 GNAAEIAAQLGRFVFRRKLKISAAALLAYGGFVAPEHAHAAQADLGTQRIELDLGSAALP 123 Query: 129 RTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 RT ++ S + + G+ + P +D L S+ Sbjct: 124 RTLLLYSPDALAMPIELPSAEAQWRTTDLQLGLARL-VESQREQWTPQQLALDRLQAYSV 182 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY GQE+V+R KR + + TD +G + D IGT+ V G ALA Sbjct: 183 KKGCYPGQEIVARTHFLGKA-KRVLQLLETDAAVDAGDAVALDGSAIGTVVSVAGNLALA 241 Query: 241 IARIDKVDHAIKKGMALTVH 260 + ++ + G AL Sbjct: 242 VLPLELT---LDAGTALQAG 258 >gi|160871769|ref|ZP_02061901.1| glycine cleavage T protein [Rickettsiella grylli] gi|159120568|gb|EDP45906.1| glycine cleavage T protein [Rickettsiella grylli] Length = 304 Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 30/283 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +++ LS I+ G+ FLQ +T D+ + + +R A +G+I+ F + + Sbjct: 9 NAIDLSELGLIRASGQDVTLFLQGQLTCDLEEINAEQSRLGAHCDAKGRIIAIFRLFFYQ 68 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQEHTFS 111 ++ + L + L L Y L SNV I I L Q+ +F Sbjct: 69 KNYYFLLPRTTLPLLLAS-LQKYALFSNVVLVDVSQDFQKIGIYGPTLKSLFEAQKLSFK 127 Query: 112 NSSFIDERF----------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 + ++ +L + H +I +H L I GI + Sbjct: 128 ENEILELNHVLSVSIPGSVPRVVLLAPLHFIHVRFEQQNIHHWHLLDILAGIPTIYPE-T 186 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPI 220 PH + L + KGCYIGQE+++R + + R + G+ + Sbjct: 187 SGQFTPHQLNLPELGAVCFHKGCYIGQEIIARTHYLGKSKSRLYRVRFNAQNSFLPGTLL 246 Query: 221 LTDDIEI--GTLGVVVGK-----KALAIARIDKVDHAIKKGMA 256 ++ G L + + +AL + + H I+ G Sbjct: 247 FDSAEKVEQGALMMSAEEDKNRYQALISLQTKAISHTIRLGCP 289 >gi|119478829|ref|XP_001259454.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181] gi|119407608|gb|EAW17557.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181] Length = 375 Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 64/284 (22%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISK----------IEEDTFILEIDRSKRD 75 ++ D + +A L QG++L I ++ +++E+D+++ Sbjct: 2 LVANDPSRATRRTGTYTAFLNSQGRVLNDAFIYPMPKGDGETATTDDPAWLVEVDKNEVS 61 Query: 76 SLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSF------------------ 115 SL+ L +KLRS + + V SW +++ Sbjct: 62 SLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDHSEPRWAAYNLESESSSPFSPSSSVAG 121 Query: 116 -IDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDFLPS 163 ID R L + ++ D+ TY R+ HGI + + + Sbjct: 122 CIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGSEVDLGTYTVRRMLHGIAEGQAEIIRE 181 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---------------- 207 + P + MD++ G+ KGCY+GQE+ R H ++RKR + + Sbjct: 182 SALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGVVRKRIVPVQLYAKSPLPSGETPVY 241 Query: 208 --TGTDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245 T LPPSGS I G VG LA+ R++ Sbjct: 242 DPTAAVALPPSGSNISKVDGRKGRSAGKFLGGVGNIGLALCRLE 285 >gi|152995116|ref|YP_001339951.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas sp. MWYL1] gi|150836040|gb|ABR70016.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas sp. MWYL1] Length = 309 Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 20/260 (7%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G A FLQ T D+ L AI +G+I+ F I + +D ++ + Sbjct: 29 GVLRVSGLDAKKFLQGQTTCDINKLSQDSGLYGAICNIKGRIISSFYIVQNNDD-VLMVM 87 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------FIDERFSIA 123 R + + L Y + + + N V + + S F+ + + Sbjct: 88 ARDLVEKTLLHLKKYAVFFKTELVDEQDNFTVYTKLAAKNIESDSNVSSNIFVTTQDNET 147 Query: 124 DVL--------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP-STIFPHDALMDL 174 L + + + A + + + P + TI P M Sbjct: 148 ITLTVSNEPLKVQLLIAPSNQTAIEEENPELAALAVLAARPLINLEQSETILPQWLNMQS 207 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 GIS TKGCY GQE+V+R+Q++ +K+ + T +L + + + IG + Sbjct: 208 TGGISFTKGCYTGQEIVARMQYKGKSKKQLTLATWQGNLDATKNIVDEQGKNIGQIFAAT 267 Query: 235 G----KKALAIARIDKVDHA 250 A I ID D Sbjct: 268 HFQETNYAQVILNIDPSDAE 287 >gi|331005217|ref|ZP_08328610.1| Folate-dependent protein for Fe/S cluster synthesis [gamma proteobacterium IMCC1989] gi|330420960|gb|EGG95233.1| Folate-dependent protein for Fe/S cluster synthesis [gamma proteobacterium IMCC1989] Length = 327 Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 55/286 (19%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-----IARGSAILTPQGKILLYF 55 ++ +L + V G A FLQ +T D+ L + A A T +G+++ F Sbjct: 5 IAFCHLKQHKLLIVKGPDAKKFLQGQVTCDINALNQEKNTSVPAPLGAHCTHKGRVVFSF 64 Query: 56 LISKIEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------ 105 ++ + L I D L Y + S V I I + + N Sbjct: 65 RAVELSPEIESQEIALSIPSDIVDIATAALKKYSVFSKVDINIDNDHYQLFGINGTNAKN 124 Query: 106 -------QEHTFSNS------------------------SFIDERFS--IADVLLHRTWG 132 EH + + +RFS IA + Sbjct: 125 TLQALAVGEHIPEETNTACHTSAGTIICIAKECYELWLNAEQAKRFSTYIASEPMQNEVM 184 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVV 191 NE I D + + E++I +GI PH + N +S +KGCY GQEVV Sbjct: 185 SNEGILDD-EYWDEVKIKNGIA-GIHANTSGVFTPHAINYHNMGNAVSFSKGCYTGQEVV 242 Query: 192 SRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVV 234 +R+Q+ ++++ + T +P +G + + ++G +V Sbjct: 243 ARMQYLGNLKRQLYLFTSKTTIPTTISAGDSLYVANK-AQSVGDIV 287 >gi|325283646|ref|YP_004256187.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP] gi|324315455|gb|ADY26570.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP] Length = 309 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 46/294 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G + F+Q +T D+ P + L +G+I + I + +D L + Sbjct: 11 GALRVTGADRLDFVQGQMTNDLRGCPTPGYVAACFLNVRGQIEHFARIYRRADD-IYLHL 69 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSSFID 117 D + +L ++L Y + V I+ + GV W Q + +++ Sbjct: 70 DAGQAPALAERLRRYVIFDQVEIQDLSADLRTLHLWGEWPAGVTEGWPQVAAAAGAAWTV 129 Query: 118 E------------RFSIADVLLHRTWGHNEKIASDIKT--------YHEL---RINHGIV 154 + R + LH E + + + T + EL R+ G+ Sbjct: 130 QMGGAAVLLGAVNRSGQLGLDLHYLAAQEEAVMAALHTALPLNERSWAELQTARVAAGLP 189 Query: 155 DPNTDFLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 +P D P + +D L IS KGCY+GQE+++R++ R R + Sbjct: 190 EPALDGFLGH-LPQEVGLDTGGPLPAISYRKGCYVGQEIMARLEARGRARYGLGRLRVPA 248 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 GS +++ +G G+ G AL R+D + + AL V+G V Sbjct: 249 GT-EVGSEVVSAGRAVGQTGLEAGGLALCRLRLD-----LPQDAALEVNGQAVT 296 >gi|289669030|ref|ZP_06490105.1| hypothetical protein XcampmN_11172 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 268 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 98/265 (36%), Gaps = 14/265 (5%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMVLPDGNAA 62 Query: 76 SLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + +L + R + I + + H + I+ A Sbjct: 63 EIAVQLGRFVFRRKLKISTAALFAFGGFAAPEHAHAAHADIRTQRIELDLGSAAFPRTLL 122 Query: 131 WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + +A+ I+ + + G+ + P +D L S+ KGC Sbjct: 123 LYAEDALAAPIEVPSVDAQWRHADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ + Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLDTDSAVEAGDAVAMDGTTIGTVVSVAGTLALAVLPL 240 Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269 + A + +G R +A P Sbjct: 241 ELTLDA-DATLQAGAYGARPRAIMP 264 >gi|332532645|ref|ZP_08408521.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Pseudoalteromonas haloplanktis ANT/505] gi|332037861|gb|EGI74310.1| folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Pseudoalteromonas haloplanktis ANT/505] Length = 303 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 101/255 (39%), Gaps = 26/255 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ I +CG + +L IT D+ L + + +GK+ F + + Sbjct: 6 ACPLSH-QLISLCGADKLSYLHGQITQDLNKLTSSNYLWAGHCSAKGKLWGVFKLFSYQ- 63 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI----------QPINGVVL----SWNQEH 108 D++ L +++ + + +L Y + + V I ++ V+ S+ + Sbjct: 64 DSYYLAGSQAEVEKSLAELKKYAVFAKVDITECSKRLIGLIGDDLSDVLAQLDISFEGDA 123 Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPS 163 F+N + + +++ + + +++ + + + + G + D + Sbjct: 124 SACDFTNGKALKLADNRVLIMVDNQFSMPDNVSTLDNEAPWQQAAMLAGEPQLSADAI-G 182 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSP 219 P + + GIS KGCY GQE V+R+++ ++ I++G + P + Sbjct: 183 EYVPQMVNLHAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSEGILSEPDLETQ 242 Query: 220 ILTDDIEIGTLGVVV 234 + + G L Sbjct: 243 LGENWRRAGKLIAQS 257 >gi|289665881|ref|ZP_06487462.1| hypothetical protein XcampvN_23092 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 268 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 98/265 (36%), Gaps = 14/265 (5%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ F A DV L + +A LT +G+++ F + + ++ ++ + Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMVLPDGNAA 62 Query: 76 SLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + +L + R + I + + H + I+ A Sbjct: 63 EIAVQLGRFVFRRKLKITTAALFAFGGFAAPEHAHAAHADIRTQRIELDLGSAAFPRTLL 122 Query: 131 WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + +A+ I+ + + G+ + P +D L S+ KGC Sbjct: 123 LYAEDALAAPIEVPSVDAQWRHADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244 Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ + Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLDTDSAVEAGDAVAMDGTTIGTVVSVAGTLALAVLPL 240 Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269 + A + +G R +A P Sbjct: 241 ELTLDA-DATLQAGAYGARPRAIMP 264 >gi|315127408|ref|YP_004069411.1| one-carbon metabolism transcriptional regulator [Pseudoalteromonas sp. SM9913] gi|315015922|gb|ADT69260.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas sp. SM9913] Length = 303 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 97/268 (36%), Gaps = 52/268 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ I + G + +L IT D+ + + + +GK+ F + ++ Sbjct: 6 ACPLSH-QVISLSGTDKLSYLHGQITQDLNKINNNNFLWTGHCSAKGKLWGVFKLFSYQQ 64 Query: 63 DTFI----LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSW 104 + ++ E++RS + L Y + + V I P + + + Sbjct: 65 NYYLTGSSAEVERSLAE-----LKKYAVFAKVEINKAPERLIGLLGDGLTDLLTQLDIHF 119 Query: 105 NQEHTFSNSS--------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + T + + +D +F + D + + + + + Sbjct: 120 SDDATACDFANGKALKLAPNRVLLMVDSQFCLPDEV---------STLDNDAMWQQASLL 170 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + D + P + +NGIS KGCY GQE V+R+++ ++ I+TG Sbjct: 171 AGEPQLSVDAI-DEYVPQMVNLQAINGISFKKGCYTGQETVARMKYLGKNKRAMYIVTGQ 229 Query: 211 D----DLPPSGSPILTDDIEIGTLGVVV 234 D P + + + G L Sbjct: 230 SEGLLDAPDIETQLGENWRRAGKLIAQS 257 >gi|312881728|ref|ZP_07741505.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus ATCC BAA-2122] gi|309370618|gb|EFP98093.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus ATCC BAA-2122] Length = 322 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 21/229 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L + I + G+ + +LQ +T DV++L A +GK+ F + Sbjct: 21 LAITALDSWGAITLSGEQSKAYLQGQVTCDVVSLEQSNFTFGAHCDAKGKVWSAFRLFYH 80 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117 + + + + + + +L Y + S V +E + L + F +S D Sbjct: 81 HSNLTMFQ-PKELIEIELSELKKYAIFSKVELEQSDDIALGLMGSLSTDFVDSITTERGD 139 Query: 118 ERFSIADVLLH----------------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 R + T E + + L I + Sbjct: 140 VRSIGQGTAVRVDNQRWLLLLTQAAAMDTLNTTEATKVSEELWTLLEIKSASPLLTRE-Q 198 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 P + L+GIS TKGCY GQE V+R ++R ++ ++ G Sbjct: 199 QLEHIPQALNLHALDGISFTKGCYTGQETVARAKYRGTNKRSLALLHGE 247 >gi|94986226|ref|YP_605590.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus geothermalis DSM 11300] gi|94556507|gb|ABF46421.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus geothermalis DSM 11300] Length = 298 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 107/283 (37%), Gaps = 37/283 (13%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G + F+Q +T D+ P A L +G+I + K E D + L +D Sbjct: 10 LRLTGADRVDFVQGQMTNDLRGAPTPGMVACAFLNVRGQIEFFARAYKREGDVY-LHLDA 68 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNS----------------- 113 + + L +L Y + V + ++ V W + + Sbjct: 69 GQAEGLAARLRRYIIFDQVELQDLTAELRTVHVWGGQAVPGWNVGGGDAQVFELGSAAVL 128 Query: 114 SFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIF 166 + R A + LH ++ + + R+ GI D D T Sbjct: 129 AGRVNRTGEAGLDLHYLARAEAEVLAALGGEELPLAMLDLARVRAGIPDVTRDGFVGT-L 187 Query: 167 PHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 P + +D+ L+ IS KGCY+GQE+++R++ R R ++G + P + + + Sbjct: 188 PQEVGLDVGGPLSAISYRKGCYVGQEIMARLEARGNARYHLARLSG--EALPDHAEVTRE 245 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G G+ G +LA R + G + V GV Sbjct: 246 GRVVGQAGLCAGGLSLARLR-----KELVPGDTVEVGGVPATV 283 >gi|303286257|ref|XP_003062418.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455935|gb|EEH53237.1| predicted protein [Micromonas pusilla CCMP1545] Length = 363 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 111/349 (31%), Gaps = 83/349 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKI 60 L+++ +++ G+ A+ LQ ++T DV L A +A+ G++ + + Sbjct: 8 GAALASRRVLRIGGEDALSLLQRVVTNDVRPLASPGAAPVYAALQNAHGRLEHDVFLHRE 67 Query: 61 -------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 + ++ D+ + L+ +LR+ V ++ + V+ + Sbjct: 68 MMSAAGGVSGALLADLPSDGFDAALALLMKLRLRAAVTLDDVGDDHAVVVAAADDDGEEG 127 Query: 114 S-------------FIDERFSIADVLLHRTWGHNEKIASDIK------------------ 142 +D R+ + Sbjct: 128 GRGTSVLPARFQFLPVDPRWVGLGRRGVLPAAAVAALLGSASPCGRGGSGGSDGGDASTS 187 Query: 143 ------------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 Y R G+ + + +T P + ++ L+G+S KGC Sbjct: 188 TSESESRSIDPFDGGGDAAYRRHRYLRGVAEGTAEL--ATRLPLECNLEGLHGVSFDKGC 245 Query: 185 YIGQEVVSRIQHRNIIRKRPMI------------------ITGTDDLPPSGSPILTDDIE 226 YIGQE+ +R ++RKR + + PSGS Sbjct: 246 YIGQELTARTHFVGVVRKRLAPIAFRSAEDAAAALASGGTVHSSAAAGPSGSKRERGG-- 303 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272 +G + V G LA+ R+ + + + G + AS P W+ Sbjct: 304 VGKVVAVEGDVGLAMMRVAAIGSDARMWATVDGGGEVEIETPASAPSWW 352 >gi|88703563|ref|ZP_01101279.1| aminomethyltransferase [Congregibacter litoralis KT71] gi|88702277|gb|EAQ99380.1| aminomethyltransferase [Congregibacter litoralis KT71] Length = 337 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 44/274 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +L ++ + + G FLQ +T D L + A A+ +G++L + + + Sbjct: 23 ACFLPGEAMLHLRGSKVPEFLQGQLTCDTRKLGPERALMGALCNVKGRVLSDLTVLYVSD 82 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 IL + RS ++ L Y S + +E+ +L + + +R Sbjct: 83 AHLILRLRRSVAATIAKTLERYAQFSRISVELAAEEHSILGLGGRDFAAECAIDGDRSDA 142 Query: 123 AD-------------------VLLHRTWGHNEKIASDIKTYHELRIN------HGIVDPN 157 AD +LL R GH E IA D L VDP Sbjct: 143 ADSASNTVSPGSLPVTLRDDALLLQRGPGHGEVIAIDDAPARALASQGTASGSQADVDPV 202 Query: 158 TDFLPSTI---------------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T + +T+ P DL ++ KGCY GQE+V+R+ ++ +K Sbjct: 203 TSWEAATLRTGHYALELEDLECFTPQALNYDLSGLVAFDKGCYTGQEIVARLHYKGRSKK 262 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 R I G + L PI D G G +VG Sbjct: 263 RLQIFEGPETL----GPIARDTSLQGESGEIVGS 292 >gi|182412329|ref|YP_001817395.1| folate-binding protein YgfZ [Opitutus terrae PB90-1] gi|177839543|gb|ACB73795.1| folate-binding protein YgfZ [Opitutus terrae PB90-1] Length = 277 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 20/241 (8%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A FLQ T D+ + L + ++L + + ED F + + Sbjct: 1 MSGPDAFTFLQGQFTNDLRAIAAGP-VYGLWLNQKARVLADSFVFRTAEDEFWVGSYFAA 59 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLL---H 128 ++ ++L Y + +V +E + + V L+ + N S + RF A Sbjct: 60 ARTISERLEAYIIADDVTVEDRTASWVGLTVSGSEVGENVSRTLRERRFEFAGRRGIDQA 119 Query: 129 RTW------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 R W + + R+ I TD P P++ ++ + Sbjct: 120 REWFLPIEEAERVNERLGGAVELNAAEMERRRVGARIPAVPTDIGPGE-LPNEGGLEAV- 177 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 IS TKGCY+GQEV++R++ +R+R ++ GTD +P +P+ + ++G L + Sbjct: 178 AISYTKGCYLGQEVIARLRSMGQVRRRLFLVRGTDAMPARPAPLFQGERQLGELRSAIAN 237 Query: 237 K 237 + Sbjct: 238 E 238 >gi|149197871|ref|ZP_01874920.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155] gi|149139092|gb|EDM27496.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155] Length = 554 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 27/257 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S L ++V G+ A LQ T+DV L K A+ S++L PQGKI+ + + K++ Sbjct: 15 SFYELKTFGVLRVSGEDADKVLQGQSTSDVKVLGAKTAQLSSLLNPQGKIISHHFLIKLD 74 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVLSWNQEHT 109 E F L +S D + D L + + + +EI P + ++ + N Sbjct: 75 EACFYLLCSKSVIDEVKDHLEKHIIMEDADLEICKSFKTFHLKNTDPSSELISNMNIHQI 134 Query: 110 FSNSSFIDERFSI---------ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTD 159 ++ ++ + + +L+ + + + D +T+ R+ G + D Sbjct: 135 EPEKLYVHDQHLLLTMGMLGLDSSILITKDGSQPDLGLEMDDETFKAFRMEAGFPIMDHD 194 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPS 216 + T+ P L L+ +S TKGC+ GQE+V+R+++R + + + + DL + Sbjct: 195 YDQKTLLPETGL--QLHCVSYTKGCFTGQEIVARVKYRGNVNRYLSALIANEVPNDLQQN 252 Query: 217 GSPILTDDIEIGTLGVV 233 + D +IG Sbjct: 253 DTLSTIDGNKIGKYKSQ 269 >gi|226356920|ref|YP_002786660.1| aminomethyltransferase [Deinococcus deserti VCD115] gi|226318910|gb|ACO46906.1| putative aminomethyltransferase [Deinococcus deserti VCD115] Length = 309 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 37/292 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +L + S ++ G + F+ +T D+ P A L +G+I + + E+D Sbjct: 22 TFLPSSSL-RITGADRVDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRREQD 80 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-----HTFSNSSFID 117 L +D + L +L Y + V +E + V W+Q + +D Sbjct: 81 -IYLHLDAGQAPGLAARLKRYIIFDQVEVEDVTDTLRTVHVWDQAVPGWLTDGPAAQSLD 139 Query: 118 -----------ERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTD 159 R + V LH E + + + R+ GI D D Sbjct: 140 LGGAVTLAGRVNRSGTSGVDLHYLARQEEDVLNALGGQEAPLDELETARVRAGIPDIVRD 199 Query: 160 FLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + P + +DL L IS KGCY+GQE+++R++ R R ++GTD P Sbjct: 200 GFTG-VLPQEVGLDLGGPLPAISYRKGCYVGQEIMARLEARGNTRYHLARLSGTD--LPD 256 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + + + +G G G +LA R + +G + V G Sbjct: 257 HAEVTAEGKVVGQSGHFAGGLSLARLR-----KELPEGAQVQVGGHLATVQL 303 >gi|194383620|dbj|BAG64781.1| unnamed protein product [Homo sapiens] Length = 163 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%) Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + R +E A D+ YH+ R G+ + D P P ++ + +NG+ Sbjct: 1 MGWRLLTQDEGPALVPGSRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGV 60 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----SPILTDDIEIGTLGVV 233 S TKGCYIGQE+ +R H +IRKR + D LP SG + + +G Sbjct: 61 SFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAG 120 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G LA+ +K+ + + V + AS P W+ Sbjct: 121 QGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 158 >gi|300859136|ref|YP_003784119.1| hypothetical protein cpfrc_01719 [Corynebacterium pseudotuberculosis FRC41] gi|300686590|gb|ADK29512.1| hypothetical protein cpfrc_01719 [Corynebacterium pseudotuberculosis FRC41] gi|302206830|gb|ADL11172.1| tRNA-modifying protein ygfZ [Corynebacterium pseudotuberculosis C231] gi|308277082|gb|ADO26981.1| Glycine cleavage system T protein [Corynebacterium pseudotuberculosis I19] Length = 376 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 28/295 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA---DV-LTLPYKIARGSAI-LTPQGKILL--YF 55 + LS++ IKV G A FL +++ DV L K SA+ L QG+IL Sbjct: 59 LIDLSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDI 118 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--- 112 L ++ ED L + R++ ++ L S V +E + + L F Sbjct: 119 LAAQDAEDALYLHLPRAQYETFFAFLTRMIFWSQVKVEPADLAVLTLMGAGVPHFPLPSS 178 Query: 113 ----SSFIDERFS--IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNT 158 ++ F+ D+L+HR+ I + + + R+ + Sbjct: 179 DAVVAAAQVPGFTTHRLDILVHRSEIMNTAKDLTLAGAIPTGLMAFTAERVRSQQPVVSL 238 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--- 215 D PH+A + N + L KGCY GQE V+R+++ + +I P Sbjct: 239 DL-DHKSIPHEAPQLIANAVHLNKGCYRGQETVARVENLGRPPRALVIALLDGSAPTTPK 297 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 G PI++ +G LG VV L + + + K L V A P Sbjct: 298 PGDPIVSGGRSVGKLGTVVQDYELGPIALAMIKQSALKATNLVVADNVALAIDPD 352 >gi|332812159|ref|XP_003308851.1| PREDICTED: putative transferase CAF17, mitochondrial isoform 1 [Pan troglodytes] gi|119590268|gb|EAW69862.1| chromosome 1 open reading frame 69 [Homo sapiens] Length = 163 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%) Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + R +E A D+ YH+ R G+ + D P P ++ + +NG+ Sbjct: 1 MGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGV 60 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----SPILTDDIEIGTLGVV 233 S TKGCYIGQE+ +R H +IRKR + D LP SG + + +G Sbjct: 61 SFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAG 120 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 G LA+ +K+ + + V + AS P W+ Sbjct: 121 QGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 158 >gi|262371763|ref|ZP_06065042.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262311788|gb|EEY92873.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 240 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 30/233 (12%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A FLQ +T V L +R +AI +G+I I K+ ++F L Sbjct: 10 SLNGVDAQKFLQGQVTIHVERLALNESRYTAICDLKGRIHFGLWIKKLNTESFELVTTHD 69 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 + + + + S + +E I V + +H Sbjct: 70 QAEEFAKHIKKFGAFSKMKLE--EIGSVFPT-----------------------IHGIQT 104 Query: 133 HNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 +DI T+ I G + T+ L P + + +G+ KGCY+GQE+ Sbjct: 105 EFSSNETDIYTWQIEAIKSGQAWISKTTEHLFQ---PQELRLHQRDGVHFDKGCYLGQEI 161 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 V+R+ + + +I DLP + + D + ++ + G AL IA+ Sbjct: 162 VARLWFKAKPKHWLHLIHAKGDLPAPATQLNKDVEVVNSVNINDGYLALVIAK 214 >gi|53130544|emb|CAG31601.1| hypothetical protein RCJMB04_8k1 [Gallus gallus] Length = 165 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +++ YH R GI + D P P ++ + +NG+S TKGCYIGQE+ +R H Sbjct: 23 ENVQDYHRHRYKQGIPEGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMG 82 Query: 199 IIRKRPMIITGTDDLP----PSGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 +IRKR + + + LP P G+ ILT+ G + +A+ R+ V+ + Sbjct: 83 VIRKRLVPVQFSVPLPQESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEPLCL 142 Query: 254 GMALTVHGVRVKASFPHWY 272 +A V++ AS P W+ Sbjct: 143 NVA--GDKVKLTASIPEWW 159 >gi|88858214|ref|ZP_01132856.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas tunicata D2] gi|88819831|gb|EAR29644.1| putative one-carbon metabolism transcriptional regulator [Pseudoalteromonas tunicata D2] Length = 304 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 27/270 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ I+ G +L IT D+ + ++ + + +GK+ + + Sbjct: 6 ACSLSD-QLIEFAGADKKSYLHGQITQDINLINHETMLWAGHCSGKGKLWAVHKLFAHND 64 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF------- 115 F + + + +L Y + + V I ++ + + ++ Sbjct: 65 SYFSI-TSADSFEQSLAELKKYAVFAKVTISHNTEFKLIGLFGDNLQPALAALNINFQGN 123 Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLP 162 D+R + ++ ++ I D T+ L I HG NT + Sbjct: 124 SAAFQFGHAIKLSDDRIILIVKDTPESFLNDIAIWLDNDFTWQSLAILHGEPSLNTSAV- 182 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 P + + GIS TKGCY GQE V+R+++ ++ II D P + + Sbjct: 183 GEYVPQMVNLQAIGGISFTKGCYTGQETVARMKYLGKNKRAMYIIQAQGDSPINSDEV-- 240 Query: 223 DDIEIGTLGVVVGK-KALAIARIDKVDHAI 251 + ++G G A A IDK A+ Sbjct: 241 -EQQLGENWRRAGHIIASAFDPIDKKAVAL 269 >gi|299136495|ref|ZP_07029678.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8] gi|298601010|gb|EFI57165.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8] Length = 317 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 109/298 (36%), Gaps = 43/298 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L +++F+++ G A +L ++T + +L + +L QG+I I + + D Sbjct: 19 APLDDRAFLRITGPDATRWLNGMVTNSIQSLAPGEGNYNFLLNAQGRIQGDGTIYR-DGD 77 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHT------------ 109 F+LE S+ +S+ L + + +V + G++L + Sbjct: 78 EFLLETSTSQVESIQQHLDRFIIMDDVELSPAYTEKQGLLLIGAKAPAILAASELPALDP 137 Query: 110 -----------FSNSSFIDERFSIAD-----VLLHRTWGHNEKIASDIKTYHELRINHGI 153 + ++ R+ + D LL + + + +LR+ Sbjct: 138 LHLSHAKSLLLLAPAAGSIPRYELWDDPASIALLRENLSNAGAVEVSSASLEQLRLIEAT 197 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D P + + + KGCY+GQE+V RI+ R + + DL Sbjct: 198 PLFSQDIRDRD-LPQET--AQAHALHFNKGCYLGQEIVERIRSRGQVHRTFTAFRLIGDL 254 Query: 214 PPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT-VHGVRV 264 P +PI + +G L G LA+ I + A+ LT G + Sbjct: 255 PTLPAPIEANGKPVGELTSAALVPLPEGPTLLALGYIRR--EALDTHQPLTYAGGTAI 310 >gi|330973020|gb|EGH73086.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. aceris str. M302273PT] Length = 293 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F I E D +L + ++ Sbjct: 2 DASKFLQGQLTCNLNYLNEDTSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMAGELIEAQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q + ++S + S + Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQQTDSVVRANDLMAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R + AD + R H + + ++R+ G V +T P Sbjct: 121 PGRAELWVRSAEADSIKSRLASHLNEAPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFSPVHASAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D + +G AL + + Sbjct: 238 GNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285 >gi|262377511|ref|ZP_06070733.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262307567|gb|EEY88708.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 241 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 97/242 (40%), Gaps = 28/242 (11%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G A FLQ +T + TL R +AI + +G+I + KI ++F + Sbjct: 7 FTLFSLNGVDAQKFLQGQVTLNTETLAENQTRYTAICSLKGRIQFGLWLKKISPESFEIV 66 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + L + + + S + +E+ + V N HT F+ Sbjct: 67 STEDQATELTNHIKKFGAFSKMKLEL--VGPVYPVINGIHTD----FV------------ 108 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIG 187 +D+ + + I G +T+F P + + GI KGCY+G Sbjct: 109 -------ATETDVTMWEQQAIESG--QAWIQAATATLFQPQELRLHQREGIHYDKGCYLG 159 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247 QEV++R+ + + ++ GT P + + D + ++ + G KAL +A+ + + Sbjct: 160 QEVIARLWFKAKPKHWLHLVQGTGAAPDVATKLNNDVEIVNSIAIENGYKALVVAKPEAL 219 Query: 248 DH 249 Sbjct: 220 AE 221 >gi|330981456|gb|EGH79559.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 293 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 107/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F I E D +L + ++ Sbjct: 2 DASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMAGELIEAQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q + ++S + S + Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRANDLIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R + AD + R + + ++R+ G V +T P Sbjct: 121 PGRAELWVRSAQADSIKSRLAAQLSEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T +++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSDEEIPQPGTALFSPVHASAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D + +G AL + + Sbjct: 238 GNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285 >gi|330964532|gb|EGH64792.1| hypothetical protein PSYAC_07740 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 293 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F + E D +L + + Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q +G ++S + + + Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWVRFGLQDGDGALVSLGLDLPQETGTVVRANELIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R AD L R + + ++R+ G V +T P Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D ++ +G AL + + Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHIGSPEGAALQMSELPYTL 285 >gi|302188267|ref|ZP_07264940.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae pv. syringae 642] Length = 293 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 106/288 (36%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + + A T +G++ F I E D +L + ++ Sbjct: 2 DASKFLQGQLTCNLNYLNEETSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEAQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q + ++S + S + Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRADDLIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R A + R + + ++R+ G V +T P Sbjct: 121 PGRTELWVRSGQAGSIKSRLAAQLSEAPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTAVFSPVHASAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D + +G AL + + Sbjct: 238 GNVVMAAQDGQHIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285 >gi|219117237|ref|XP_002179413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409304|gb|EEC49236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 657 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 95/276 (34%), Gaps = 75/276 (27%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLT------------------------------LPY-- 36 + + V G+ A FLQ ++T D+ + LP Sbjct: 34 RRILSVSGQGATTFLQGLVTCDLQSPPAPPRPEPIDHPQPGVPKSMKMDATGTTELPEVE 93 Query: 37 --KIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL-RSNVIIE 93 R + L +G+I+ L+ K +E + +++ + DSL+ L +KL RS V I Sbjct: 94 FTDRLRAACFLDHKGRIVTDSLLWKTDESQYFIDVPGATADSLLQHLHAFKLRRSKVTIA 153 Query: 94 IQPIN---GVVLSWNQEHTFSNS--SFIDERFSIADVLLHRTWGHNEKIASDIKT----- 143 + ++ V+ S +D R + + + + + T Sbjct: 154 DRTLDMSSHVIFGTLNAGGSPPGYLSGVDPRHPSLGMRVLQLPSESSSNGENTSTLNEQD 213 Query: 144 ---------------------------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 Y +R G+ + + L + + L Sbjct: 214 SDNLSLSTRHEAFAKLVSKVFPTSPGNYELVRRLAGVAEGSE--LTGK-IALETNQEHLQ 270 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 +S KGCY+GQE+ +R+ H +RKR + + D Sbjct: 271 AVSFHKGCYLGQELTARVHHTGAVRKRILPLLLLDP 306 >gi|302036423|ref|YP_003796745.1| putative aminomethyltransferase [Candidatus Nitrospira defluvii] gi|300604487|emb|CBK40819.1| putative Aminomethyltransferase [Candidatus Nitrospira defluvii] Length = 363 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 46/272 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS++ I+V G I +LQ+II+ D+L L R S+ LT +GK+L YF + + D Sbjct: 48 LSHRGKIRVTGDDRIKWLQSIISNDILPLQPGQGRYSSFLTHKGKMLGYFRVY-VSADAV 106 Query: 66 ILEIDRSKRDSLIDKLLFYKL---RSN-----------VIIEIQPINGVVLSWNQE---- 107 +E D+ L + L ++ ++ + V ++ E Sbjct: 107 WVEDVGEVGDATFQALRKFLLYGTKAKMENCGESWGLLLVSGPKSAEAVAAAFGIEVRAL 166 Query: 108 -------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144 T + R + + + Sbjct: 167 QLLHTLPATIDGQQALILRTEETGEQDFEVLLPADAVPAAWNQLMTSGAPFGIKPVGTQA 226 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G+ D I P +A ++ SL+KGCY GQEVV+R+ +R+ Sbjct: 227 RELLRIEAGLPKAGPDL-NEEIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGNVRRH 284 Query: 204 PM-IITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + +I +PP+GS + + D E+G + V Sbjct: 285 LVGLIIQDKAVPPAGSKLFSGDREVGWVSSAV 316 >gi|50083936|ref|YP_045446.1| hypothetical protein ACIAD0714 [Acinetobacter sp. ADP1] gi|49529912|emb|CAG67624.1| conserved hypothetical protein; putative Glycine cleavage T protein (aminomethyl transferase) [Acinetobacter sp. ADP1] Length = 240 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 102/263 (38%), Gaps = 34/263 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M+ + ++ + I G A FLQ + + L R + I +G+I I+K+ Sbjct: 1 MNDLAFTSFTLI---GVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKL 57 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + F + + + + + Y S + +E ++ Q FSNS Sbjct: 58 NPEEFQIVTTQDQAEDFALHIKKYGAFSKMKLEKTGTVYPTVTGIQTE-FSNS------- 109 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +DI + I G + P + + +G+ Sbjct: 110 -----------------ETDINAWQLQAIESGQA-WISKLTEHEFQPQELRLHQRDGVDY 151 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 KGCY+GQE+V+R+ + + ++ G ++P S + + D + ++ + G KAL Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVLGDGEVPVSATKLNNDVEVVNSIAIASGYKALV 211 Query: 241 IARIDKVDHAIKKGMALTVHGVR 263 IA+ ++ ++LTV + Sbjct: 212 IAKPAALEE-----LSLTVLDLP 229 >gi|331015591|gb|EGH95647.1| hypothetical protein PLA106_06430 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 293 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F + E D +L + + Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q +G ++ + + + Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQDGDGALVGLGLDLPQDTGTVVRANELIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R AD L R + + ++R+ G V +T P Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D ++ +G AL ++ + Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPYTL 285 >gi|109899465|ref|YP_662720.1| glycine cleavage T protein (aminomethyl transferase) [Pseudoalteromonas atlantica T6c] gi|109701746|gb|ABG41666.1| glycine cleavage T protein (aminomethyl transferase) [Pseudoalteromonas atlantica T6c] Length = 319 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 34/263 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + + + G+ I +LQ +TAD+ L A + +GK F + D Sbjct: 17 CRLDDLHVLNISGEERIKYLQGQVTADMTKLSAHEALFGSHCDFKGKTWNIFYALEHN-D 75 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------------- 107 + + + + + +L Y + + V +P + Sbjct: 76 SVLFVSHKESAAASLPELKKYGVFAKVDFVDEPTQWACFGGQGQQLEAVISQLFGSTPAE 135 Query: 108 --HTFSNSSFI-------DERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + SN++ + ++RF + H +D + L I G+ + Sbjct: 136 HLQSLSNANGVVLALGSENKRFMLVLTPEGQAHLAAHETLTYADKTLWEVLDIKAGVAEL 195 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213 T + P + L+GIS +KGCY+GQEVV+R + ++ I+ + L Sbjct: 196 RT-ATSNEFVPQMMNLQALDGISFSKGCYMGQEVVARTKFLGKNKRAAFILKADESVNLL 254 Query: 214 PPSGSPILTDD--IEIGTLGVVV 234 P I + + GT+ Sbjct: 255 PGDNLEIPVGENWRKGGTVLRSA 277 >gi|302331392|gb|ADL21586.1| Glycine cleavage T protein [Corynebacterium pseudotuberculosis 1002] Length = 362 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 28/295 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA---DV-LTLPYKIARGSAI-LTPQGKILL--YF 55 + LS++ IKV G A FL +++ DV L K SA+ L QG+IL Sbjct: 45 LIDLSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDI 104 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--- 112 L ++ ED L + R++ ++ L S V +E + + L F Sbjct: 105 LAAQDAEDALYLHLPRAQYETFFAFLTRMIFWSQVKVEPADLAVLTLMGAGVPHFPLPSS 164 Query: 113 ----SSFIDERFS--IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNT 158 ++ F+ D+L+HR+ I + + + R+ + Sbjct: 165 DAVVAAAQVPGFTTHRLDILVHRSEIMNTAKDLTLAGAIPTGLMAFTAERVRSQQPVVSL 224 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--- 215 D PH+A + N + L KGCY GQE V+R+++ + +I P Sbjct: 225 DL-DHKSIPHEAPQLIANAVHLNKGCYRGQETVARVENLGRPPRALVIALLDGSAPTTPK 283 Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 G PI++ +G LG VV L + + + K L V A P Sbjct: 284 PGDPIVSGGRSVGKLGTVVQDYELGPIALAMIKQSALKATNLVVADNVALAIDPD 338 >gi|284105831|ref|ZP_06386235.1| glycine cleavage system T protein [Candidatus Poribacteria sp. WGA-A3] gi|283830118|gb|EFC34384.1| glycine cleavage system T protein [Candidatus Poribacteria sp. WGA-A3] Length = 364 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 54/306 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S++ + V G+ + +LQ+II+ D+L L S+ ++ +GKIL YF + ++EE Sbjct: 46 ADVSHRGLLHVTGEDRVTWLQSIISNDLLPLQSGDWLYSSFMSHKGKILSYFRVYRLEES 105 Query: 64 TFILEI--DRSKRDSLIDKLLFYKLRSN---------------------------VIIE- 93 + ++ + K L Y ++ V I Sbjct: 106 LVVEDVGESGAVTYDTFRKFLLYGTKAKMKNGEDTWGIILVSGPKAPLLIRHALDVDISG 165 Query: 94 -------IQPING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDI 141 +NG +++ QE + + D R W E + A Sbjct: 166 LKQGGFLTHDLNGQPALIATTQETGERDVELLMPN-EAMDQAWSRLWEAGEAVGLRAFGT 224 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LRI GI D I P +A ++ SL+KGCY GQEVV+R+ ++ Sbjct: 225 AARESLRIEAGIPKLGPDL-NERIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGTVK 282 Query: 202 KRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254 +R + + + +P + + ++D E+G + + K LA+A + G Sbjct: 283 RRLVGLVIDSPEAPIPSPDAKVFSEDREVGWVSSAIHSPTLNKTLALAF--PLRDFTAPG 340 Query: 255 MALTVH 260 AL V Sbjct: 341 TALDVD 346 >gi|37521041|ref|NP_924418.1| hypothetical protein glr1472 [Gloeobacter violaceus PCC 7421] gi|35212037|dbj|BAC89413.1| glr1472 [Gloeobacter violaceus PCC 7421] Length = 288 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 23/249 (9%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + +LS++ + V GK A +LQ ++T ++ TL A+LT QGK++ +F + + Sbjct: 3 LEGYFLSDRELLSVRGKDAADYLQRVLTCNLKTLQPGKFIPGALLTGQGKLVAFFDLYQQ 62 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------------PINGVVLS 103 + + L + ++L +L Y +V++E + P G Sbjct: 63 ADGGYTLAVPSGCAEALAARLERYVFSEDVVLEPREAIVLELLSSAPPFEPIPEPGRYRD 122 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + S + + L R + + + RI G+ + + Sbjct: 123 FALDGLPARLSTLAPGHYRLE--LVRMPSEFAPAPLEAERFEAWRIEQGLPAWDKEL-ND 179 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223 + P + +D IS KGCY GQEV+SR + + + + L +G+ + + Sbjct: 180 NLIPLNLGID--GAISHDKGCYTGQEVISRATFVGHPAQELVGLLAEEPL-EAGTELTLE 236 Query: 224 DIEIGTLGV 232 +G + Sbjct: 237 GDYVGVVTS 245 >gi|71892042|ref|YP_277772.1| putative aminomethyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|118577991|sp|Q493E3|YGFZ_BLOPB RecName: Full=tRNA-modifying protein ygfZ gi|71796148|gb|AAZ40899.1| putative aminomethyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 330 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 48/261 (18%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-- 58 ++ + L + +++ G I L T D+ L +A P+GK++ + Sbjct: 20 LTFISLEEWTLVRLHGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNLYVFHL 79 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------IEI 94 K +E FI ++ K+ I+++ Y + SNV + Sbjct: 80 KNQEMAFIERLNICKKQ--IEEMKKYMVFSNVTVIPDYNAILIGIAGTNARNHLSMFFSV 137 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHEL 147 P + Q+ T S ERF S+ D LL+ + ++ +D + + L Sbjct: 138 LPNKTHTIIHTQDVTLLYLSSPSERFLLIINKKSVLDYLLNES--QSQIQFNDSRQWVSL 195 Query: 148 RINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 + G I++P P MD+L+GIS KGCYIGQE ++RI++R ++ Sbjct: 196 DMEAGYPIIEP---ITSELFIPQAVNMDILDGISFNKGCYIGQESIARIKYRGYNKQTLY 252 Query: 206 IITGTDD------LPPSGSPI 220 + G D LP +G + Sbjct: 253 RLNGVMDYKKNYNLPAAGDQV 273 >gi|255537081|ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus communis] gi|223549506|gb|EEF50994.1| aminomethyltransferase, putative [Ricinus communis] Length = 258 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 47/236 (19%) Query: 84 YKLRSNVIIE----------------------IQPINGVVLSWN-----------QEHTF 110 Y+LRS V IE + W Q Sbjct: 8 YRLRSKVEIENVAGEFSCWQRFGGNLTETSKVADEPEAASVGWGSGVDRAARSSTQGDGH 67 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTI 165 F D R + ++ K Y RI +G+ + + + Sbjct: 68 GWQWFKDPRLDCLGFRGIFPSNQTPPLVESDKETNEKNYQLWRIENGVAEGSIEIPKGEA 127 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGS 218 P + + LN IS KGCY+GQE+V+R HR +IRKR + + DD GS Sbjct: 128 IPLEYNLACLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDSGTEVEEKVAPGS 187 Query: 219 PI--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + T ++G + +G + L + R+++ + ++V+ P W+ Sbjct: 188 EVIDTTSCKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQDDLKVETIRPKWW 243 >gi|302132822|ref|ZP_07258812.1| hypothetical protein PsyrptN_15597 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 293 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F + E D +L + + Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S V +Q +G ++ + + + Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQEGDGALVGLGLDLPQDTGTVVRANELIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R AD L R + + ++R+ G V +T P Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D ++ +G AL ++ + Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPYTL 285 >gi|237798703|ref|ZP_04587164.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806136|ref|ZP_04592840.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021556|gb|EGI01613.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027249|gb|EGI07304.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 293 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 107/286 (37%), Gaps = 39/286 (13%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F I + D +L + ++ Sbjct: 2 DAGKFLQGQLTCNLNYLNEDRSSLGARCTQKGRMQSSFRIV-FDGDGCLLAMASELIEAQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE------RFS 121 + L Y + S V +Q +G ++S + + + R S Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQDGDGALVSLGLDLPQETDAVVRSQDMLAIRVS 120 Query: 122 IADVLLH---------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 A L R+ ++ + + ++ GI P + Sbjct: 121 PARAELWVRAEQADDIRSRLASQLAEGPLNDWLLGQVRAGIGQ-VFGSTREEFIPQMINL 179 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTD--DIEIGT 229 + G+S KGCY GQE+V+R+Q+ +++R +T D +P G+ + + +G Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQGDQVPEPGTAVFSPVHASAVGN 239 Query: 230 LGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 + + + LA+ + D ++ +G AL + + + Sbjct: 240 VVIAAQAGQAVELLAVLQGDAAENGRIHLGSPEGAALQMSDLPYQL 285 >gi|320333227|ref|YP_004169938.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211] gi|319754516|gb|ADV66273.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211] Length = 287 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 97/280 (34%), Gaps = 34/280 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G + F+Q +T + P A L +G++ + K +D + L + Sbjct: 10 LRLTGADRVDFVQGQMTNHLKAAPTPGMVPCAFLNVRGQVEFFARAYKRADDVY-LHLAE 68 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE------------ 118 +L +L Y + V + ++ G W + + Sbjct: 69 GDAPALAARLRRYIIFDQVDVQDVTEQLGTAHVWPGAALPGWDAAGADVQSFELGGGTVL 128 Query: 119 -----RFSIADVLLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFP 167 R V +H H + + + R+ G+ D D + P Sbjct: 129 AARVNRVGAVGVDVHYLRAHEAAVLAALGEEVPGAALERARLEAGVPDVPADEWRG-VLP 187 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 + +D IS KGCY+GQE+++R++ R R R +TG LP + Sbjct: 188 QEVGLDF--AISYRKGCYVGQEIMARLEARGNTRYRLARLTGEG-LPAHADVTDAAGKVV 244 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G G G LA R + D G + V GV + Sbjct: 245 GRTGASTGAVTLARLRKEFAD-----GADVQVGGVSARVE 279 >gi|196232959|ref|ZP_03131808.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428] gi|196222937|gb|EDY17458.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428] Length = 307 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 15/224 (6%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +V S ++ + + G + +L +T+DV L + + + T +GK+ ++ +E Sbjct: 17 AVDFSERAQLMLTGPDRVRYLNGQVTSDVRKLSPGQTQMACVTTAKGKLCAD-IVITAQE 75 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI----- 116 D ++ + S R+ L+ +L Y + +V IE + ++ E T S + + Sbjct: 76 DALYVDAEGSLREGLLARLERYIVADDVAIEDVSEKYALLHYLGAEPTISGAGKVASARR 135 Query: 117 ------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 D R + + R ++A D LRI GI + P +A Sbjct: 136 LGRVGWDLRLPREEFVAARESLLAGRVAVDAALAETLRIEAGIPSWGREL-DENTLPPEA 194 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +D + I KGCYIGQEV+SR++ + ++ P Sbjct: 195 GLDQTH-IDYHKGCYIGQEVISRLRSVGHVNRQLTGFIAEGAAP 237 >gi|319760397|ref|YP_004124335.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str. BVAF] gi|318039111|gb|ADV33661.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str. BVAF] Length = 331 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 41/278 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L N IK+ GK +IP+L T D+ L S+ QGK++ + Sbjct: 20 LTLISLKNWILIKLTGKDSIPYLHNQFTCDIKNLNINKYTFSSHCNVQGKMITNMYVFYF 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQP 96 + + I+ L Y + S V I + P Sbjct: 80 NKYELAFICPTNVYKKQIEILKKYSIFSKVNIIPDYNVTLLGVAGSNAKQYLSIFFKTLP 139 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIAS---DIKTYHELRIN 150 + +Q + ERF + + L + + +++ + + L I Sbjct: 140 NQINTIVHHQGISVLYFHLPKERFLLIVHDNSLFYSLLKEAQFLSAQYNNHSQWISLDIE 199 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + FP A +DLL GIS KGCY+GQE+++RIQH + ++ +TGT Sbjct: 200 SGYPYIDI-LTSEMFFPQAANIDLLGGISFNKGCYLGQELIARIQHYKLNKQSLHKLTGT 258 Query: 211 DD------LPPSGSPILTDD----IEIGTLGVVVGKKA 238 D +P SG+ ++ ++GT+ K Sbjct: 259 IDTNKHNQIPISGNYLMQIQNKTYKKVGTVLQSCQIKG 296 >gi|119503977|ref|ZP_01626058.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2080] gi|119459980|gb|EAW41074.1| predicted aminomethyltransferase [marine gamma proteobacterium HTCC2080] Length = 318 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 26/281 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+ ++ +++ G+ A FLQ TAD + A +G+++ F ++ + Sbjct: 20 APLAQEALLRLEGQDACKFLQGQTTADFGQVNALDVIPGAFCDVKGRVIADFRALIVDPE 79 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSFIDERFS 121 T IL + S D L L Y + S + +P GV S H + + + Sbjct: 80 TVILCVMESLADLLSGHLTKYLMFSKAELNRTPEPPWGVAGSEAHHHFDVDQKLTEGNRA 139 Query: 122 IADVLLHRTW-------------------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A +N+ I + L G T Sbjct: 140 AAVAAGWLIPLGHQTSLLIPEDAKQVGINLNNKSIDEFESAWRALACLRGEAR-ITSSTT 198 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL- 221 P D DL +S KGCY GQE+++R+ R ++R + + G ++ Sbjct: 199 GKYLPQDLSYDLAGWVSFDKGCYTGQEIIARLHWRGTPKRRLYLGSAAVKQLSDGLKLVN 258 Query: 222 -TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 TD +G++ + ++ ++ + A G + + Sbjct: 259 QTDARAVGSIVNTANYGSGSVILVEAAEGA--AGQDVNIDE 297 >gi|255537315|ref|XP_002509724.1| aminomethyltransferase, putative [Ricinus communis] gi|223549623|gb|EEF51111.1| aminomethyltransferase, putative [Ricinus communis] Length = 252 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 47/236 (19%) Query: 84 YKLRSNVIIEI------------------------QPINGVVLSWNQEHTFSNSS----- 114 Y+LRS V IE + V + +S+ Sbjct: 8 YRLRSKVEIENVAGEFSCWQRFGGNLTETSKVVDESEADSVGWGSGVDRAARSSAQGDGH 67 Query: 115 ----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTI 165 F D R + ++ K Y RI +G+ + +T+ Sbjct: 68 GWQWFKDPRLDCLGFRGIFPSNQTPPLVEADTETNEKNYQLWRIENGVAEGSTEIPKGEA 127 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGS 218 P + + LN IS KGCY+GQE+V+R HR +IRKR +++ DD GS Sbjct: 128 IPLEYNLASLNAISFDKGCYVGQELVARTHHRGVIRKRLLLLMFLDDSGTEVEEKVAPGS 187 Query: 219 PI--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 + T ++G + +G + L + R+++ + + ++V+ P W+ Sbjct: 188 EVIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKWLGSLIIEGQDDLKVETIRPKWW 243 >gi|330889491|gb|EGH22152.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas syringae pv. mori str. 301020] Length = 293 Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 39/283 (13%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F I E D +L + + Sbjct: 2 DASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHTFSNSSFIDERFS 121 + L Y + S + + G+ L+ + + I R S Sbjct: 61 LLDLRKYAVFSKSKLTDESAEWGRFGLQDGDSALVGLGLDLAQETDAVVRANELIAIRVS 120 Query: 122 IADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 L G + + S + + +I GI P + Sbjct: 121 PGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VFGSTREEFIPQMINL 179 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEIGT 229 + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G+ + + +G Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPGTALFSPVHASAVGN 239 Query: 230 LGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263 + + + LA+ + D ++ +G AL + + Sbjct: 240 VVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 282 >gi|304310532|ref|YP_003810130.1| Glycine cleavage T protein (aminomethyltransferase) [gamma proteobacterium HdN1] gi|301796265|emb|CBL44473.1| Glycine cleavage T protein (aminomethyltransferase) [gamma proteobacterium HdN1] Length = 374 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 84/283 (29%), Gaps = 62/283 (21%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--------- 58 + F+++ G A FLQ +T D+ + R A T +G+I FL Sbjct: 40 HWEFLRISGPDAASFLQGQVTCDIREIANGHLRLGAHCTAKGRIQASFLGFLDRTSTPAE 99 Query: 59 ------------------KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----- 95 +F++ + L Y + + V + Sbjct: 100 TSKPEAPKTEPKEASEANPTSTTSFVMLLPPGMTAPTQQALAKYAMFAKVELSDASDAFQ 159 Query: 96 ------------------PINGVVLSWNQEHTFSNSSFIDERFSIADVL--------LHR 129 P+ Q S +D + ++ L Sbjct: 160 ALMIGGRDAKSWCERVNLPVQETPYGLTQSSQSDKISLLDADLPLWLIITTPKRSKELQS 219 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 W +AS ++ + G + + P + D LN I+ KGCY GQE Sbjct: 220 QWPTT-ALASGLEGWQRCLSELGQAHIHPN-TQDKFIPQELNYDQLNAINFKKGCYKGQE 277 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD--DIEIGTL 230 +++R+ + + R + P + D IG + Sbjct: 278 IIARLHFKGTPKYRTYRFQWQSKVSPMIGEAVKDLHGETIGYI 320 >gi|320105946|ref|YP_004181536.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4] gi|319924467|gb|ADV81542.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4] Length = 322 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 108/287 (37%), Gaps = 41/287 (14%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 +I+V G + +L + T V L + L QG+I +I E D +L+ Sbjct: 24 GWIRVTGSDRVRWLNGMTTNSVQALAPGQGAYTFFLNAQGRIQGDAVIW-AEADHLLLQT 82 Query: 70 DRSKRDSLIDKLLFYKLRSNVII-EIQPINGV--VLSWNQEHTFSNSSFIDE-----RFS 121 ++ + LI L + + +V + ++ V +L E +++ R S Sbjct: 83 SPAQTEKLIALLDRFIIMDDVELADVSADQHVLQILGVRAEDFLNSAGLTPPPTELTRIS 142 Query: 122 IADVLLHRTWGH----NEKIASDIKTYHE--------------------LRINHGIVDPN 157 D + R G E I+S LR+ G Sbjct: 143 HTDAQIARLPGAVVPRFEIISSSPTALDAISGQFLEEGLSPLADGALEMLRVLEGTPLFG 202 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 TD P + + KGCY+GQE+V RI+ R + + + D+P G Sbjct: 203 TDIRDRD-LPQET--AQTRALHFNKGCYLGQEIVERIRSRGNVHRTFHAFLLSGDIPAPG 259 Query: 218 SPILTDDIEIGTLGVVV---GKKALAIARIDKVDHAIKKGMALTVHG 261 +P+ ++ +G + G + LA+ I + A+ + +ALT G Sbjct: 260 TPLTAEEKPVGEFTSIATLPGGRTLALGYIRR--EALDRNLALTFPG 304 >gi|330877446|gb|EGH11595.1| hypothetical protein PSYMP_17900 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 293 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F + E D +L + + Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + L Y + S + +Q +G ++S + + + Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWLRFGLQDGDGALVSLGLDLPQETGTVVRANELIAIRVS 120 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 R AD L R + + ++R+ G V +T P Sbjct: 121 PARAELWVRADQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEI 227 + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + + Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLLSDEIPAPGTALFSPVHGSAV 237 Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 G + + + LA+ + D ++ +G AL + + Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHIGSPEGAALQMSELPYTL 285 >gi|261856409|ref|YP_003263692.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2] gi|261836878|gb|ACX96645.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2] Length = 344 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 111/312 (35%), Gaps = 56/312 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G+ A FLQA++T ++L L A A+ +G+I LI + Sbjct: 27 APLDTRTSLLVSGEEAGEFLQAMLTQEILLLDGTHAARGALCNAKGRISTTVLIHPLRPQ 86 Query: 64 ----------TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVV--------- 101 T+ L + L+ L Y LR V+I + GV+ Sbjct: 87 GREQGSEQSMTYRLTVPSELAADLLKTLKLYVLRRRVVINGNDDWQNIGVLNPDPAFLAD 146 Query: 102 --LSWNQEHTFSNSSFI------------DERFSIADVL-LHRTWGHNEKIASDIKTYHE 146 ++ + + S+ D R S+ + T + + + Sbjct: 147 LGIAASASDPLAQSTLPSGVIVTWEHMGDDARLSLQGPTSVLLTLAPHLPQRTSNSAWQC 206 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM- 205 IN GI + P +D LN +S KGCY GQEVV+R+ + +R + Sbjct: 207 AEINDGIPTITQETALH-FVPQWLNLDQLNAVSFKKGCYPGQEVVARLHYLGKSNRRMIK 265 Query: 206 -------IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKG 254 +T + P+ SP + + VG + LA+ R++ + Sbjct: 266 GSTRLTDPVTPRSVIYPANSPETEAGEIVRSAICRVGNENMQVFLAVIRLNHLHD----- 320 Query: 255 MALTVHGVRVKA 266 L + G Sbjct: 321 -ELLIEGQPCTL 331 >gi|330957818|gb|EGH58078.1| hypothetical protein PMA4326_04469 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 293 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 87/249 (34%), Gaps = 33/249 (13%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A FLQ +T ++ L + A T +G++ F I E D +L + + Sbjct: 2 DAGKFLQGQLTCNLNYLSESQSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEPQ 60 Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQE------HTFSNSSFIDERFS 121 + L Y + S V +Q + ++ + + I R S Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWVRFGLQEGDDALVGLGLDLPQETGAVARADALIAIRVS 120 Query: 122 IADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 A L G + + + +I GI P + Sbjct: 121 PARAELWVPAGQADSTRSHLAARLAEGSLNDWLLGQIRAGIGQ-VFGSTREEFIPQMINL 179 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLG 231 + G+S KGCY GQE+V+R+Q+ +++R +T ++P G+ + + Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQAQEIPQPGTALFSP-----VHA 234 Query: 232 VVVGKKALA 240 VG LA Sbjct: 235 SAVGNVVLA 243 >gi|218459788|ref|ZP_03499879.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli Kim 5] Length = 131 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 50/115 (43%), Positives = 67/115 (58%) Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 +DF FPHD L+DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP + Sbjct: 3 GSDFALQDAFPHDVLLDLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGT 62 Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271 G+ I D +GTLG V G LAI R+D+ A+ +G L G V + P W Sbjct: 63 GTEITAADKPVGTLGSVAGGSGLAIVRVDRAGAAMAEGTPLLAGGTPVALALPQW 117 >gi|332305550|ref|YP_004433401.1| folate-binding protein YgfZ [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172879|gb|AEE22133.1| folate-binding protein YgfZ [Glaciecola agarilytica 4H-3-7+YE-5] Length = 347 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 86/263 (32%), Gaps = 34/263 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + +KV G+ I +LQ +TAD+ +L +GK F + +E Sbjct: 45 CRLDDLQILKVSGEERIKYLQGQVTADMTSLSSNEGLLGCHCDFKGKAWNIFYALEHDE- 103 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------------- 107 + + + +L Y + + V + Sbjct: 104 SVLFVSHKEGAAKSTPELKKYGVFAKVEFSDDTTSWACFGGQGAQLEAVIKQLFADVPAK 163 Query: 108 --HTFSNS-----SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDP 156 T SN + + VL + H+E + + I GI Sbjct: 164 DRQTLSNENGVVMALGSPQMRFMLVLTEQGQAALAAHDELQYAPGTLWEVQDIKAGIAQL 223 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PP 215 T + P + +N IS +KGCY+GQEVV+R + ++ ++ + + Sbjct: 224 RT-ATSNEFVPQMMNLQAVNAISFSKGCYMGQEVVARTKFLGKNKRAAFVLKAEEAVDLE 282 Query: 216 SGS--PILTDD--IEIGTLGVVV 234 +G I D GT+ Sbjct: 283 AGDTLEIPVGDNWRRGGTVLRCA 305 >gi|305680339|ref|ZP_07403147.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium matruchotii ATCC 14266] gi|305659870|gb|EFM49369.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium matruchotii ATCC 14266] Length = 363 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 30/291 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K+ Sbjct: 49 ALVDRSHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKV- 107 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEH 108 +D F L+I +SL+D L S V I E+ + G Sbjct: 108 KDAFYLDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFG 167 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 + R ++ DV E + + Y R+ G+ + + D PH Sbjct: 168 AWVRHDVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDL-DDKSIPH 224 Query: 169 DALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220 + + + + L KGCY GQE V+R+++ + ++ LP G+PI Sbjct: 225 EVPALINRGERIAAVHLDKGCYRGQETVARVENLGRPPRLLTLVHLDGSAPTLPTPGTPI 284 Query: 221 LTD-----DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + +G +G V+ + + A AL + Sbjct: 285 VMGPATGRQRTVGRIGTVIHDHEFGPIALALLKRAALTSQALMAGESAILV 335 >gi|328949863|ref|YP_004367198.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM 14884] gi|328450187|gb|AEB11088.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM 14884] Length = 330 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 33/286 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + + + G + FL TA++ L + L +G++ L+ + E Sbjct: 47 SERGVLALSGADRVDFLNGQCTANIKALTPGGVVEALFLNARGQVELFGTVYHRGE-ALW 105 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------IQPINGVVLSWNQEHTFSNSSFID 117 + +L + Y + V +E + P G VL F++ Sbjct: 106 ITAPSGMSQALEARFRRYIIFDQVALEPFEAAQFRLVGPKAGEVLGRAGYALPEAGRFVE 165 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------RINHGIVDPNTDFL 161 + + + + + L R+ GI D Sbjct: 166 VKGGLL-ARDAHGYALVVPVEDAEAAWRALCAAGATPVGRGALEVWRVERGIPDLPEALG 224 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 P + ++ L + KGCY+GQE+++R++ R +R+R M + ++ PSG+ + Sbjct: 225 R---LPQEVGLEDL--VHPGKGCYLGQEIMARLEARGNVRRRLMGLRL-GEVVPSGAEVT 278 Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + +G +G VV L + + A++ G + V GV + + Sbjct: 279 HEGRAVGQVGTVVRSPRLGAVALAVLGKALEPGDRVEVGGVAAEVA 324 >gi|225022191|ref|ZP_03711383.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii ATCC 33806] gi|224945124|gb|EEG26333.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii ATCC 33806] Length = 335 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 30/291 (10%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K+ Sbjct: 21 ALVDRSHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKV- 79 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEH 108 +D F L+I +SL+D L S V I E+ + G Sbjct: 80 KDAFYLDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFG 139 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 + R ++ DV E + + Y R+ G+ + + D PH Sbjct: 140 AWVRHDVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDL-DDKSIPH 196 Query: 169 DALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220 + + + + L KGCY GQE V+R+++ + ++ LP G+PI Sbjct: 197 EVPALINRGERIAAVHLDKGCYRGQETVARVENLGRPPRLLTLVHLDGSAPTLPTPGTPI 256 Query: 221 LTD-----DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + +G +G V+ + + A ALT + Sbjct: 257 VMGPATGRQRTVGRIGTVIHDHEFGPIALALLKRAALTSQALTAGESAILV 307 >gi|291295136|ref|YP_003506534.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279] gi|290470095|gb|ADD27514.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279] Length = 325 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 42/294 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + SN +++ G FL T+++ + + L+ +G+I L+ + Sbjct: 41 ALLDFSNHGLLELRGPDGTEFLHNQCTSNIRAMLPDSWLETLFLSARGQIEHLGLVFNLG 100 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERF 120 + + +L ++ + + V IE P + + L + + + R+ Sbjct: 101 NSFW---VSSPSARALAERFRKFIVFDQVEIEALPWSLLRLHGPGAEAVAQQLTALPPRW 157 Query: 121 SIADVL----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + L + + +H R+ GI D Sbjct: 158 GLVKTPHLVLARDEFGLWFLVPASQAYQLAQRLLEAGASPVGHQAWHIWRVERGIPDLPE 217 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 P +A ++ +S KGCY+GQE+++R++ R R + M + G +LP SG+ Sbjct: 218 ALGE---LPQEAGLE--GRVSYKKGCYLGQEIMARLEARGNTRYQLMGLLGQKELP-SGA 271 Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 I + +G +G V G ALA+ R + G + V G S Sbjct: 272 EIFREGKRVGRVGTAVESPRLGAIALALLR-----KELAPGDQVHVEGWSATVS 320 >gi|322436415|ref|YP_004218627.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9] gi|321164142|gb|ADW69847.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9] Length = 324 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 114/311 (36%), Gaps = 49/311 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S ++N +IKV G +L ++T ++ L + +L+ QG+I Sbjct: 11 SFAPITNLGWIKVTGSDRTRWLNGMVTNNITALTPGQGCYNFVLSNQGRIQADLTAFPT- 69 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------------- 93 ED +LE D ++ +L + + +V +E Sbjct: 70 EDAILLETDLTRIPALTALFDRFIIMDDVELEDISPTRAGLTLIGPAALRPLLDLGLTPL 129 Query: 94 -IQPINGVVLSWNQEH-TFSNS-SFIDERF-----SIADVLLHRTWGHNEKIASDIKTYH 145 + P+ ++WN TF ++ S + RF LL + Sbjct: 130 ALLPLETSQITWNGAEVTFIHAHSPLIPRFELWSDPKTIALLTAALEAANIPQAAEDDLE 189 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G TD P + L + +KGCY+GQE+V RI R + + Sbjct: 190 HLRLLEGTPLYGTDI-RDKELPQET--AQLRALHFSKGCYLGQEIVERINSRGAVHRTFA 246 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259 T DLPP+G+P+ D+ +G + G LA+ I + A+ + +T Sbjct: 247 GFLLTGDLPPAGTPLTADEKPVGEITSAARIPLPTGDIQLALGYIRR--EALDRAATITY 304 Query: 260 -HGVRVKASFP 269 G + P Sbjct: 305 PGGTAIAVKLP 315 >gi|285018598|ref|YP_003376309.1| glycine cleavage system t (aminomethyltransferase) protein [Xanthomonas albilineans GPE PC73] gi|283473816|emb|CBA16318.1| putative glycine cleavage system t (aminomethyltransferase) protein [Xanthomonas albilineans] Length = 288 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + ++ + G A+ F QA DV L + +A L +G+++ F + + +DT Sbjct: 15 LPHLEYVALRGPDAVAFAQAQFANDVQALQVGQWQWNAWLNVKGRVIALFALLRQADDTL 74 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-----VLSWNQEHTFSNSSFIDERF 120 + + L L + R + I + + + Q + Sbjct: 75 LALLPDGGASELAAALGRFVFRRKLRIAAEDDLRAHGRLSLPAQAQGALSATGKDGAIEL 134 Query: 121 SIADVLLHRTW---GHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 + L RT +A+D + + E + G+ D P +D Sbjct: 135 DMGGDGLSRTLRLMPAQATLAADPGIVDAWREADLRLGLARLAPD-QHEQWTPQQLGLDR 193 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 L+ S+ KGCY GQE+V+R ++ ++ + +G+P+L + IG++ + Sbjct: 194 LHAFSVKKGCYPGQEIVARTHFLGKAKRALQLLELEAPV-ATGAPVLREGEPIGSVISIA 252 Query: 235 GKKALAIARIDK 246 G ALA+ +++ Sbjct: 253 GTLALAVLPLEE 264 >gi|225631230|ref|ZP_03787922.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591076|gb|EEH12266.1| aminomethyl transferase family protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 182 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 9/185 (4%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + + Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114 + T +LE + +I+KL K LR + ++ + V + +N + +S Sbjct: 61 GKYT-LLECENIHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 F D R + + + E + D Y ++RI + + D D + ++ FP L+D Sbjct: 119 FQDPRHKLLGMRIIHKDEIKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLVDK 177 Query: 175 LNGIS 179 +NGIS Sbjct: 178 VNGIS 182 >gi|189220194|ref|YP_001940834.1| aminomethyltransferase [Methylacidiphilum infernorum V4] gi|189187052|gb|ACD84237.1| Predicted aminomethyltransferase [Methylacidiphilum infernorum V4] Length = 398 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 11/275 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS Q+ ++ G+ I +L + AD+ +LP A +A L +G++ I+ E Sbjct: 125 CELSGQAIWRISGRDRIKYLNGQLPADIASLPPGCALQTAALNRKGRMDCELWIAHHPE- 183 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SFIDERFS 121 ++ + ++ +L + + V IE + + ++ + S F ++RF Sbjct: 184 FLFVDCPKEIEEATEKRLTSFLVADKVTIEKLGGQFYLYHYFSPDPPKGFSFCFQNKRFG 243 Query: 122 IADVLLH--RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 I + R LR+ + I + +T +A + + IS Sbjct: 244 IPGWDVWSERRLEDFGCPEVPPGVQESLRLENMIPRWGKELTSNT-LALEAFL-SKDSIS 301 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV---VVG- 235 TKGCY+GQE++SRI H I + ++ D+ P + G L G Sbjct: 302 FTKGCYVGQEIISRIHHIGEINQLLTLLIALDESIPQLGQLYYQSRPAGRLTSSGYSYGY 361 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 KA+A+ I K + + + +++ + P Sbjct: 362 NKAVALGYIRKEYRKEQGIVQIAGQSLKILKAPPP 396 >gi|227489453|ref|ZP_03919769.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090631|gb|EEI25943.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 409 Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 34/283 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S V SN+ + V G FL T + + A + L G+I ++ Sbjct: 112 LSLVDRSNRVILSVTGDDREAFL----TNLLSKIIAPGATMALDLDANGRIQHEMDVAVT 167 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E++ F++ ++L D L+ S V I I P+ V + EHT +++F Sbjct: 168 EDEVFLIVSPHE-AETLRDYLVAMIFWSKVEITISPLQLVTVF--GEHTPLDAAFAR--- 221 Query: 121 SIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPNTDFLPSTIFPH 168 +I L +G + A+ + ++ RI G D D PH Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQNGQLAGLMSFEAYRIARGEPDHPVDC-DEKTIPH 280 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225 + + L + L KGCY GQE V+R+++ + ++ LP +P+ Sbjct: 281 EVGLWLAEAVDLDKGCYRGQETVARVENLGRAPRALVVTLLDGSVPQLPAPQTPVTLAGR 340 Query: 226 EIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVH 260 +GTLG VV G ALA + + + + A++V Sbjct: 341 TVGTLGSVVHHHELGPIALATIKASALQRSGEFMAGDCAMSVD 383 >gi|152988054|ref|YP_001350103.1| hypothetical protein PSPA7_4761 [Pseudomonas aeruginosa PA7] gi|150963212|gb|ABR85237.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 314 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 87/256 (33%), Gaps = 27/256 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L ++ + V G A FLQ +T ++ L + + T +G++L F I + Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCTIKGRLLSSFRILLQGDG 67 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 + L D L Y + S + + V + + I+ Sbjct: 68 LLLALASELLEAQLAD-LKKYAVFSKATLADESAAWVRVGLRDAGEALRALGIEAPDEAG 126 Query: 124 DVLLHR-------------TWGHNEKI------------ASDIKTYHELRINHGIVDPNT 158 + H W + + + + ++ GI Sbjct: 127 GIARHADLLAVALGDARVELWIPAARAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 P + + G+S KGCY GQE+V+R+Q+ +++R + + PP + Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALAGEDPPEPA 245 Query: 219 PILTDDIEIGTLGVVV 234 L + ++G VV Sbjct: 246 TGLFSPVHATSVGEVV 261 >gi|164663221|ref|XP_001732732.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966] gi|159106635|gb|EDP45518.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966] Length = 289 Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 55/271 (20%) Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV-------LSWNQE 107 LI E + ++E+D+ LI + +KLRS I ++ V+ + + Sbjct: 8 LIPYAREPSILVEVDKCISTDLIAFVKRFKLRSKFQINDVSDAWDVMQLYGNAQVDLDML 67 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNE-----KIASDIKTYHELRINHGIVDPNTDFLP 162 + + +F D R + H E K A+D+ Y R+ G+ + + + Sbjct: 68 NLYGAYAFRDVRSPEMGWRVLLPKKHTEQEIPLKNATDV-DYTIHRMLQGVPEGSKEIHM 126 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD----------- 211 + P ++ +D ++G+ KGCYIGQE+ +R ++RKR M I+ Sbjct: 127 GSSLPLESCIDYMHGVDFRKGCYIGQELTARTFFTGLVRKRIMPISLDPNPCHHSSPAPI 186 Query: 212 --------DLPPSGSPIL--------------TDDIEIGTLGVVVGKKALAIARIDKVDH 249 LP SG+ + G + LA+ R+++VD Sbjct: 187 NVDTSMNLALPDSGADVRFVMPQKSDVSTSQPGRSRSAGKFLSGIHNIGLALLRLEQVDK 246 Query: 250 AI--KKGMALTVHGVR------VKASFPHWY 272 + + G V + A P W+ Sbjct: 247 SNSEEAGHPRLVLEAPDGSPLYLHAYRPSWW 277 >gi|307111245|gb|EFN59480.1| hypothetical protein CHLNCDRAFT_138089 [Chlorella variabilis] Length = 712 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 118/323 (36%), Gaps = 75/323 (23%) Query: 25 AIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEED--TFILEIDRSKRDSLIDK 80 I+T DV L A + + IL QG+ L L+ + +++ T +++ D L+ Sbjct: 18 GIVTNDVTMLEPPGAPPQYACILNAQGRYLHDLLMHRTKDEVPTLLVDADSRGTPDLLRL 77 Query: 81 LLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSF--------IDERFSIADVL----- 126 L Y+LR V I+ + V ++ E ++ D R + Sbjct: 78 LKRYRLRQKVDIDDVSQQYCVWALYSGEAPALQAALSSLPPGWAPDPRLDQLGLRAVLPA 137 Query: 127 ------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 G + + + RI HG+ + +++ + P + +D L GIS Sbjct: 138 DAEGSGSGGGGGAGSLGSVSWRDHRRWRILHGVAEGDSEIPTGEVVPLEFNIDGLAGISF 197 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII------TGTDDLP-------------------- 214 TKGCY+GQE+++R + ++RKR M +G + Sbjct: 198 TKGCYVGQELMARTHFKGVVRKRLMPFVLAPPGSGDSGMAQQQQQQQQQAGIGAVPAAAL 257 Query: 215 ----------------PSGSPILTDD-----IEIGTLGVVVGKKALAIARIDKVDHAIKK 253 G+ + + +G + V G LA+ R+ V+ A Sbjct: 258 AADAAAVAGSDQAIRVQPGAAVYWEQPGGRRKSVGVVRVADGALGLAVLRLAAVEAARAA 317 Query: 254 GMALTVHGVRVKAS----FPHWY 272 G +L V +A P+W+ Sbjct: 318 GQSLVVGESEARAELQPWRPNWW 340 >gi|294878109|ref|XP_002768268.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239870504|gb|EER00986.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 283 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 28/257 (10%) Query: 36 YKIARGSAILTPQGKILLYFLISK----------------IEEDTFILEIDRSKRDSLID 79 + A + L+P+G++L L+ E++ ++++D D+++ Sbjct: 2 EQSAAAAVFLSPKGRVLFDCLMYSGVSLKPDTSKGIVSDDKGEESLVVDVDEGVLDNVMR 61 Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERFSIADVLLHRTWGHN 134 + +++ + IE GV + ++ + + D R + D+ L + Sbjct: 62 LFIRHRVHLPLNIEKLDNLGVYWTPSKSQNGCDGDTEVPVYEDPR--VKDLGLRAILPKS 119 Query: 135 EKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + A + Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R Sbjct: 120 DIDAESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTR 179 Query: 194 IQHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAI 251 + +RKR + D+ SG+ I+ D +IG + + + + I ++ Sbjct: 180 ASKKLAVRKRLFGMRIDGDVDVESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP- 238 Query: 252 KKGMALTVHGVRVKASF 268 KGM + V+A+ Sbjct: 239 -KGMQMNTKQAMVEATK 254 >gi|218507752|ref|ZP_03505630.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli Brasil 5] Length = 119 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTP GKIL F+I + Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIASLAADEARPGALLTPHGKILFDFMIWQ- 67 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 + D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGINVCWGEDTD 116 >gi|326331984|ref|ZP_08198269.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1] gi|325950122|gb|EGD42177.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1] Length = 319 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 102/271 (37%), Gaps = 23/271 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ +++ G + +L ++ + L + IL+PQG + F + Sbjct: 44 VDLSHRDVVRIAGPDRLTWLHSLTSQAFEGLAPGAWTSALILSPQGHVEH-FFSGVDDGT 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F+ + +L+D L K S+V + ++ V Q ++F R S+ Sbjct: 103 AFLAWTEPGAGSALVDYLERMKFWSDVTVTLETSQASVWRPAQGYSFV------PRESL- 155 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD----FLPSTIFPHDALMDLLN--- 176 + A + LRI G D +P+ + D+ Sbjct: 156 -----EKYAAAAGPACGFWAFEALRIERGEPRFGVDTDARTIPNEVGWVPGAADVAGPEY 210 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVV 233 + L KGCY GQE V+R+ +R +++ LP +GS ++ + +G +G Sbjct: 211 AVHLDKGCYRGQETVARVHTLGRPPRRLVLLHLDGSENRLPVAGSELVFGEKTVGFVGSS 270 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 L + V + L V G+ V Sbjct: 271 ARHHELGPIALGLVKRNVPVDAQLVVDGMPV 301 >gi|332977316|gb|EGK14104.1| glycine cleavage T protein [Psychrobacter sp. 1501(2011)] Length = 250 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 37/248 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A FLQ+ +T ++ + +AI +G+I + K ED F + I Sbjct: 12 ITLQGEDAGKFLQSQLTVNINKIDLSY-IPAAIANLKGRIEFGIWVKKQAEDQFDIVISA 70 Query: 72 SKRDSLIDKLLFYKLRSNVI----IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 SL L + S I+I P V+ + E + S +D+ Sbjct: 71 DCLPSLQAHLKKFGAFSKFTTSEPIDIYPC--VLGADTDEQEATFSHNVDK--------- 119 Query: 128 HRTWGHNEKIASDIKTYHELRINHG---IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 D++ + L I G IV+ + P + + G+ KGC Sbjct: 120 -----------CDVEEWKALSIATGNYWIVEATQELFQ----PQELRLHQRGGVDYDKGC 164 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIA 242 Y+GQEV++RI + + + G ++P G+ + + +G +AL +A Sbjct: 165 YLGQEVIARIYFKASPKAFLHRVKGEGEVPQPGAS-FDKVQIVNAIATQDKLGFEALVVA 223 Query: 243 RIDKVDHA 250 R + ++++ Sbjct: 224 RPEHLENS 231 >gi|126667163|ref|ZP_01738137.1| hypothetical protein MELB17_07399 [Marinobacter sp. ELB17] gi|126628319|gb|EAZ98942.1| hypothetical protein MELB17_07399 [Marinobacter sp. ELB17] Length = 349 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 98/303 (32%), Gaps = 45/303 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ + V G FLQ + ++ + + +A +G+ + + ++D Sbjct: 33 AELSDRLMLTVSGAGTDKFLQGQFSQNMSEVTAGKSLHAAASNRKGRAYALVRMVRHDDD 92 Query: 64 TFILEIDRSKRDSLIDKLLFY----------KLRSNVIIEIQPINGVVLSWNQEHTF--- 110 +++ R D+ +L Y +L + II I ++ Sbjct: 93 -ILMDFSRELADATEAELRKYLMLFRGTTMARLEDSKIIGIFGSELAQAVAGEQAALVTD 151 Query: 111 ---------------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 E +S L HN+ + T+ +I Sbjct: 152 LRQPGDTLATGHGHLILLEPSIEGPARYELWSPDGALPDVLDAHNQSSQCSLATWQAGQI 211 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ T P L G+ KGCY GQE+++R+ ++K + Sbjct: 212 AAGVP-WLTSATAGAYVPQMLNWQHLGGVHFKKGCYTGQEIIARMHFLGQLKKSLYRLAV 270 Query: 210 TDDL-PPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVR 263 T D P G I + +G + + LA+ R + + + + G Sbjct: 271 TADAEPAVGDAISNGERNVGEVVNTLQTGPQQYHLLAVIRHNAANGPLTLADS---GGAS 327 Query: 264 VKA 266 ++ Sbjct: 328 LQL 330 >gi|227541048|ref|ZP_03971097.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183308|gb|EEI64280.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 409 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 34/283 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S V SN+ + V G FL T + + A + L G+I ++ Sbjct: 112 LSLVDRSNRVILSVTGDDREAFL----TNLLSKIIAPGATMALDLDANGRIQHEMDVAVT 167 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E++ F++ ++L D L+ S V I I P+ V + +HT +++F Sbjct: 168 EDEVFLIVSPHE-AETLRDYLVAMIFWSKVEITISPLQLVTVF--GKHTPLDAAFAR--- 221 Query: 121 SIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPNTDFLPSTIFPH 168 +I L +G + A+ + ++ RI G D D PH Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQNGQLAGLMSFEAYRIARGEPDHPVDC-DEKTIPH 280 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225 + + L + L KGCY GQE V+R+++ + ++ LP +P+ Sbjct: 281 EVGLWLAEAVDLDKGCYRGQETVARVENLGRAPRALVVTLLDGSVPQLPAPQTPVTLAGR 340 Query: 226 EIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVH 260 +GTLG VV G ALA + + + + A++V Sbjct: 341 TVGTLGSVVHHHELGPIALATIKASALQRSGEFMAGDCAMSVD 383 >gi|294056332|ref|YP_003549990.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM 45221] gi|293615665|gb|ADE55820.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM 45221] Length = 307 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 102/286 (35%), Gaps = 38/286 (13%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + I + A FLQ+ + ++ L +GK++ I + +E++F+L Sbjct: 13 ALIHASDEDAADFLQSQFSNELRPFAEGRCTYGLWLDVKGKVIADSFILQCDEESFLLYS 72 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDER----FSIA 123 S + L KL + + +V +EI V+ + E + + A Sbjct: 73 ATSSAEGLQAKLEQHIIADDVELEISEGARVISLFGPGVESALTEWGASVPQTGDFVEHA 132 Query: 124 DVLLHRTW-GHNEKIAS-----------------------DIKTYHELRINHGIVDPNTD 159 V L W G ++ D + R+ G + Sbjct: 133 GVRLLPVWNGPRPRVDCIVRDAAALDTVVDALKRLSVEFVDTNRFELERVEQGYPVVPQE 192 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGS 218 P + + +S TKGC++GQEVV+R+ + R+ ++G D P + Sbjct: 193 LGEGD-LPGEGGAE-NYALSFTKGCFLGQEVVARMHNLGTPRRALYRVSGVGDPPAVPQA 250 Query: 219 PILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK-KGMALTV 259 + G L G +A+ ++ V I +G ALT+ Sbjct: 251 LQTMEGKTAGELRSAFVTADGWLGVAMLKLSAVGAPIHLQGEALTL 296 >gi|254796700|ref|YP_003081536.1| aminomethyl transferase family protein [Neorickettsia risticii str. Illinois] gi|254589932|gb|ACT69294.1| aminomethyl transferase family protein [Neorickettsia risticii str. Illinois] Length = 310 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 95/281 (33%), Gaps = 56/281 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDR 71 + G+ FLQ IIT +V TL ILTP+G+++ + K +T +LE + Sbjct: 12 SISGERVKAFLQGIITCNVETLEDCA--YGLILTPKGRLICDLFVYKCSTETELLLETNH 69 Query: 72 SKRDSLIDKLLFYKLRSNVII--------------------------------------- 92 ++L+ L Y + + I Sbjct: 70 CNTEALLSVLDLYNFKRGITIQQKAYFSYVGIPKSTDACVTQPEEAHQDTCKVPRTKGLT 129 Query: 93 ----EIQPINGVVLSWNQEHTFSNS------SFIDERFSIADVLLHRTWGHNEKIASDIK 142 ++Q +V ++ T D R + + + Sbjct: 130 GAVHDVQKFLEMVEGVSEAKTQLRFIKECLFCVRDPRNRKLGFRVVLSSSEFPTSEVCHE 189 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 Y +RI I + + P+ IFP + MD KGCY+GQEV+SR + +N I + Sbjct: 190 EYQRIRIMSKISEAGKELKPN-IFPLEYAMDY--AFDFNKGCYVGQEVISRFRIKNFIER 246 Query: 203 RPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAIA 242 + G + G I D +G LA+ Sbjct: 247 ALFCLQGEEGASLEEGDKIYLGDDMVGCFSSCCQNYGLAVL 287 >gi|284045623|ref|YP_003395963.1| folate-binding protein YgfZ [Conexibacter woesei DSM 14684] gi|283949844|gb|ADB52588.1| folate-binding protein YgfZ [Conexibacter woesei DSM 14684] Length = 336 Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 64/316 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S + + + G FLQ +T DV L +A LT +GK+ + + D Sbjct: 24 SERGKLALTGGETKRFLQGQVTNDVEALVPGSGCYAAFLTAKGKMRGDLRVLDVHVDARE 83 Query: 64 -----------------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------- 98 +L+ +R L + +KL +V + + + Sbjct: 84 FPGQAGDQAPTGNSQCEALLLDCERVALQDLFTMVRQFKLGFDVELHRRTLERGLLSLVG 143 Query: 99 --------GVVLSWNQEHTFSNSSFIDE---------------RFSIADVLLHRTWGHNE 135 + + + ++ +D S L R Sbjct: 144 PRSRAVLGDAAAALGEPEHANVAATVDGIAVVLVATDVGVDLIADSAQTDALSRALLARG 203 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 A D LR+ G + T P +A ++ +S TKGCY+GQE V+R+ Sbjct: 204 AHAVDEPVVETLRVERGRPRYGAEL-DDTTIPQEADLN-DRAVSFTKGCYVGQETVARLF 261 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 ++ + + + + P G+ ++ +G +G V G ALA+ R + Sbjct: 262 YKGKPNRHLRGLRLSAPVAP-GTELMLGGKRVGAVGSVALSPAHGPIALALVRREA---- 316 Query: 251 IKKGMALTVHGVRVKA 266 + G +T + Sbjct: 317 -EPGATVTAGEATAEV 331 >gi|222834272|gb|EEE72749.1| predicted protein [Populus trichocarpa] Length = 266 Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 47/262 (17%) Query: 52 LLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------- 103 + FL+ + + D +L++ + + +L + LR+ + +L Sbjct: 1 MASFLMWR-DADGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEA 59 Query: 104 ----------WNQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIAS 139 T S+ + R + AD L ++ G +AS Sbjct: 60 ALQQAGLPTPQAPLATASDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVAS 119 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + L + GI P +L+ G++ KGCY GQEVV+R Q+R Sbjct: 120 P-AFWDWLDVASGIPRIAA-ATQEQFVPQMINFELIGGVNFRKGCYPGQEVVARSQYRGT 177 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI 251 +++R + GT D+P + + I + G++V G + LA +ID + A+ Sbjct: 178 LKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGAL 237 Query: 252 K----KGMALTVHGVRVKASFP 269 G A++ + + P Sbjct: 238 HLGAASGPAVSTGALPYEVPLP 259 >gi|237755923|ref|ZP_04584514.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691922|gb|EEP60939.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 302 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 43/282 (15%) Query: 1 MSSVYLSNQSFIKVCGKSA-----------IPFLQAIITADVLTLPYKIARGSAILTPQG 49 M+ + L ++ I V GK + FLQ I+T ++ L K + +L +G Sbjct: 1 MNWIKLK-RNKILVKGKQSKLNLKGIKEEHTAFLQGILTNNIAQLNDKEFNYNLMLDHKG 59 Query: 50 KILLYFLISKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 + F + K E+ + E DR D + +KL KL V E+ + + + Sbjct: 60 SPIWDFYVFKDNENYILDFECDR---DEVFNKLKQLKLSYQVFFEVLELEHIYIFGEDSE 116 Query: 109 TFSNSSF--IDERFS--------------IADVLLHRTWGHNEKIAS--------DIKTY 144 F +F + ERF +G+ E I S D + Sbjct: 117 KFIQQTFNEVPERFKYLKSENIYIANNPLRLGQKGFDIFGNLESIKSSLPTDLKIDEGKF 176 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRIN+ I + + + P + + ISL KGCY+GQE ++R+ R + Sbjct: 177 ENLRINNCIPKIGKELV-EKVLPLETNI-WKYAISLNKGCYVGQEAIARVYFRGKPPRVM 234 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 + + + L + +L +D +G + V K AI I + Sbjct: 235 VKFSFDNALDEN-EKVLLNDKPVGFITSVNIKDKTAIGFILR 275 >gi|93005000|ref|YP_579437.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter cryohalolentis K5] gi|92392678|gb|ABE73953.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter cryohalolentis K5] Length = 255 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 41/275 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +++ L S + + G+ A FLQ +T DV L + +AI +G+I I K Sbjct: 5 INTAALPQFSQLSIQGEDAEKFLQGQLTCDVTKLGLSY-QAAAIGNLKGRIEFGIWIKKQ 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E F + I ++ L + S T IDE Sbjct: 64 AEKHFDMVISADCAEAFQGHLKKFGAFSKCD-------------TSAPTPIYPCVIDEVP 110 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDALMDLLN 176 + + H T + +I+ + + I G + +F P + + Sbjct: 111 TFSHQDDHNT-------SKNIQAWMQSSIATGNYWIVAATQGEFQ-----PQELRLHQRG 158 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-----EIGTLG 231 G+ KGCY+GQEV++RI ++ + + GT + SG+ + + + + Sbjct: 159 GMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGT-SVKGSGTTPVAGEKLDKVQVVNAIT 217 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G +AL +AR +++ +LT+ + + Sbjct: 218 TSEGFEALVVARPEQLAE-----SSLTILDLPLAL 247 >gi|94969655|ref|YP_591703.1| glycine cleavage T protein, aminomethyl transferase [Candidatus Koribacter versatilis Ellin345] gi|94551705|gb|ABF41629.1| glycine cleavage T protein, aminomethyl transferase [Candidatus Koribacter versatilis Ellin345] Length = 342 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 98/288 (34%), Gaps = 45/288 (15%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++ I G+ + +L +IT +V L S +L QG+I + + D +LE Sbjct: 49 RAKIVATGEDRVRWLNGMITNNVRDLAVSRGVYSFVLNAQGRIQGDLIAFQRG-DYILLE 107 Query: 69 IDRSKRDSLIDKLLFYKLRSNVII----------------------------EIQPINGV 100 D S+ +SL + + +V I +++ ++ V Sbjct: 108 TDESQAESLTALFDRFIIMDDVEIANVSEKLASIGVKGPKAAEVLREAGFPADLKALDVV 167 Query: 101 VLSWNQEHT--FSNSSFIDERFSIA-----DVLLHRTWGHNEKIASDIKTYHELRINHGI 153 +WN +S F I V + + RI GI Sbjct: 168 DATWNGVGISVACGASEQFPEFEIWFAPEHTVAVWDALVSAGAQPVGYEALELHRIATGI 227 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P + + + +KGCY+GQE+V RI R + R L Sbjct: 228 PAFGQDIRERD-LPQET--AQSHALHFSKGCYVGQEIVERIHSRGNV-HRGFTGFSLSQL 283 Query: 214 PPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMA 256 SG+ ++ D E+G + V AL R + + G A Sbjct: 284 VNSGTKLVRDGKEVGEITSVAELPSKKIIALGYVRREAATSELVAGDA 331 >gi|6705950|dbj|BAA89441.1| ORF4 [Corynebacterium ammoniagenes] Length = 359 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 109/293 (37%), Gaps = 35/293 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I V G A FL +++ + + + + L QG+IL Y + + +E F Sbjct: 45 SQRRVISVIGPDAPEFLNNLLSQKLDNVEPGYSAAALDLDIQGRILHYADVVRTDE-GFY 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----QEHTFSNSSFIDE---- 118 L+ ++ +S + L S V + + + L + ++++F+ E Sbjct: 104 LDTTDAEFESFLKFLTMMVFWSKVEVAEADLAIITLLGQVPTLPDSVAASAAFVREVPNW 163 Query: 119 -RFSIADVLLHR--------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + D+ + R + + Y R+ + + D H+ Sbjct: 164 TQTPRTDIAVPREQLKDVAKELISAGFKPAGLMAYTAERVRNLEPEKAADL-DDKSIAHE 222 Query: 170 A-----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPIL 221 ++ + L KGCY GQE ++R+++ + ++ +LP +G+ I Sbjct: 223 IAHWIGRGEIPGAVHLEKGCYRGQETIARVENLGRSPRLLTLLHLDGSVPELPATGTDIT 282 Query: 222 TDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMA---LTVHGVRVKA 266 + +G +G ++ G AL + + + K G L + V Sbjct: 283 SGGRRVGRVGSIIDDFELGPIALGLIKRSALPTPEKAGSPAAELLIGDCAVTV 335 >gi|284028969|ref|YP_003378900.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836] gi|283808262|gb|ADB30101.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836] Length = 334 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 14/267 (5%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS++ + + G + +L A+ T + + + +L+P G + + + Sbjct: 44 YVDLSHRDVVTISGPDRLTWLHALTTQYFEGMRPGTSTTALLLSPTGHVEH-AMYGVDDG 102 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DER 119 +TF L + +L++ L S V I ++ W ++ + Sbjct: 103 ETFWLHTEPGAAAALVEWLQKMVFMSRVEIADVTDAFAIV-WRPGTAPADGPLTRSGGDS 161 Query: 120 FSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + L R + + + Y LRI G D P++ + Sbjct: 162 LGGYETFLPREELSAFAELAGPPAGVWAYEALRIEAGAPRLGLD-TDERAIPNELGWLGI 220 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGV 232 G+ L KGCY GQE V+R+ + +R + + LP G + D ++G +G Sbjct: 221 -GVHLDKGCYRGQETVARVHNLGRPPRRLVRLHLDGSVDHLPAHGYAVRAGDKQVGFVGS 279 Query: 233 VVGKKALAIARIDKVDHAIKKGMALTV 259 L + V ++ L V Sbjct: 280 AARHHELGPIALALVKRSVDPAAELQV 306 >gi|88608631|ref|YP_506208.1| aminomethyl transferase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600800|gb|ABD46268.1| aminomethyl transferase family protein [Neorickettsia sennetsu str. Miyayama] Length = 310 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 96/281 (34%), Gaps = 56/281 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDR 71 + G+ FLQ IIT +V TL ILTP+G+ + + + +T +LE +R Sbjct: 12 SIGGERVKAFLQGIITCNVETLEDCA--YGLILTPKGRFICDLFVYRCSTETELLLETNR 69 Query: 72 SKRDSLIDKLLFYKLRSNVII--------------------------------------- 92 ++L+ L Y + +++I Sbjct: 70 CNTEALLRVLDLYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTCRGPRIKKLT 129 Query: 93 ----EIQPINGVVLSWNQEHTFSN------SSFIDERFSIADVLLHRTWGHNEKIASDIK 142 ++ +V ++ T D R + + + Sbjct: 130 DAVRDVCKFLEIVEGASETKTQLGLIEKCLFCVRDPRNRKLGFRVVLSSSEFPTSEVCHE 189 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 Y +RI I + + P+T FP + MD KGCY+GQEV+SR + R+ I + Sbjct: 190 EYQRIRIMSKISEAGKELKPNT-FPLEYAMDY--AFDFNKGCYVGQEVISRFRIRDFIER 246 Query: 203 RPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAIA 242 + + G I D +G L LA+ Sbjct: 247 ALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVL 287 >gi|300780493|ref|ZP_07090349.1| folate-binding protein YgfZ [Corynebacterium genitalium ATCC 33030] gi|300534603|gb|EFK55662.1| folate-binding protein YgfZ [Corynebacterium genitalium ATCC 33030] Length = 396 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 35/287 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I+V G A FL +++ + + + L QG+IL + +++ ED F Sbjct: 51 SHRHVIRVAGPDAPVFLNNLLSQKLDDVSPGFTAAALDLDMQGRILHHADVTRT-EDAFY 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIADV 125 L++ ++ +D L S+V +E + + + F D Sbjct: 110 LDVPSYAFETFLDFLTKMIFWSDVTVEEADLAILTVLGAPSSFDPGVLAATPAFVRTVDW 169 Query: 126 LLHR-------------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 R + I T+ RI + D + Sbjct: 170 RGPRRVDIAVPRQELMNAFRALTGADGAALTPAGIMTFTAERIKALEPEQRADL-DAKSI 228 Query: 167 PHD-----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218 PH+ A L + L KGCY GQE V+R+++ + +++ P G Sbjct: 229 PHEVHTLIARGGNLGAVHLDKGCYRGQETVARVENLGRSPRLLVMLHIDGSAPVDPQPGD 288 Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVH 260 I +G LG V G LA+ + ++ G A V Sbjct: 289 TITMGGRTVGRLGSVAHDCDYGPIGLALVKRSALNAPATSGPAAAVG 335 >gi|329894324|ref|ZP_08270194.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [gamma proteobacterium IMCC3088] gi|328923120|gb|EGG30443.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [gamma proteobacterium IMCC3088] Length = 272 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 6/237 (2%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A LQ +T DV +L + + +G++ L + K + L + Sbjct: 13 LELIGPDAAKTLQGQLTNDVESLRNRKGLDGLLCNLKGRVELVVKVYKHSPEQLTLVVPT 72 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 + D+L +L Y S + + L + F ++ + Sbjct: 73 ANIDALKRRLAPYVAFSKSRLNELNLETYSLVIAPPDSDPIEVPAGLWFGDLGLISPQAI 132 Query: 132 GHNEKI--ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 + AS I +H RI+ G++ + P +D L +S KGCY+GQE Sbjct: 133 NQLTRPYTASSIDEFHHWRIHSGMIQLTPE-QSGLYTPQALSLDRLGYVSFKKGCYMGQE 191 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---LAIAR 243 +++R+ ++ + + ++ + L +GT+ ++ LA R Sbjct: 192 IIARLHYKGQSKHQLALLQCSPGLTTESKITSQTGDLVGTVVDAGANRSGYYLASVR 248 >gi|227833984|ref|YP_002835691.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] gi|227455000|gb|ACP33753.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] Length = 353 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 30/271 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF Sbjct: 51 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERFS 121 L++ ++ +SL D L S V +E V+ Q +++ ++ Sbjct: 110 LDVPTAQFESLRDFLTAMVFWSQVTVEEAD-AAVITVLGQPLQKPSAALVERSVQWPGCP 168 Query: 122 IADVLLHRTWGHNEKIA--------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--- 170 D L+ R + + Y R+ + D H+ Sbjct: 169 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDL-DEKTIAHEVPQW 227 Query: 171 ---LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224 D+ + L KGCY GQE V+R+++ + +++ P SG+ I Sbjct: 228 IRRNDDVPAFVHLEKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPERPDSGADITLGG 287 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G LG VV G AL + + ++H Sbjct: 288 RRVGRLGTVVEDCDYGPIALGLIKRSALNHG 318 >gi|255325915|ref|ZP_05367007.1| glycine cleavage T-protein, C- barrel [Corynebacterium tuberculostearicum SK141] gi|255297127|gb|EET76452.1| glycine cleavage T-protein, C- barrel [Corynebacterium tuberculostearicum SK141] Length = 354 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 108/296 (36%), Gaps = 41/296 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I+V GK A FL +++ + P G+ L QG IL + I + +D F+ Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRT-DDAFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------NSS 114 +++ ++ DSL L S V +E I + L + + Sbjct: 110 IDVPAAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWSGIK 169 Query: 115 FID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 +D R S+ + H + + + + R+ + D + PH+ Sbjct: 170 RVDLGVPRESLVEATKH--LEESGARLAGLMAFTAERVRAREPELAADL-DNKSIPHEVP 226 Query: 172 M------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILT 222 D + L KGCY GQE V+R+++ + + + P G I Sbjct: 227 QWISRSVDNPAHVHLNKGCYRGQETVARVENLGRSPRLLVQLHLDGSAPQRPNVGDDITF 286 Query: 223 DDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA---SFPH 270 + ++G +G +V G AL + + A+ G L V S P Sbjct: 287 NGRKVGRIGTIVDDCDFGPIALGLVK----RSALDAGT-LEVGDTAASIDPSSIPE 337 >gi|148652133|ref|YP_001279226.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter sp. PRwf-1] gi|148571217|gb|ABQ93276.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter sp. PRwf-1] Length = 247 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 30/246 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G A FLQ IT +V L + +AI +G+I I K ++ F + I Sbjct: 9 ITLQGDDAAKFLQGQITVNVNRLTASY-QPAAIANLKGRIEFGLWIKKQDDKQFDIVISS 67 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 L L + S I + E + +F Sbjct: 68 DCLAPLQAHLKKFGAFSKFTIS--EPIDIYPYVGNEAGQAQPTF---------------- 109 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 ++ + I G T+ + P + + G+ KGCY+GQEV+ Sbjct: 110 -SENADEQNMTDWMSASIATG-NYWITEATQTLFQPQELRLHQRGGVDYDKGCYLGQEVI 167 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDK 246 +RI + + + GT P +G + +I + + G +AL +AR ++ Sbjct: 168 ARIYFKAAPKAFLHRVKGTGAAPKAGESL----DKIQVVNAIDLADGSGYEALVVARPEQ 223 Query: 247 VDHAIK 252 ++ A + Sbjct: 224 LEQAQQ 229 >gi|262196877|ref|YP_003268086.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365] gi|262080224|gb|ACY16193.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365] Length = 267 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 104/269 (38%), Gaps = 34/269 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G FLQ + +AD+ L + IL+ +G+++ ++ E+D + Sbjct: 6 SEWGHIRVTGSDRARFLQGMCSADIEALAPGDWTRAVILSVKGRVVSIIEVACREDD-LL 64 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + D + L + + V E QP++ + + S+ D Sbjct: 65 ITCQADIADKTLSVLDKHAIMDEVAFEHVAQPMHRIW--------DTPSAVWD------- 109 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + A+ + RI G+ D + FP ++L+D ++ KGC Sbjct: 110 --APPIFAPPPGPAASAEQLEIRRIEAGMPRYGVD-VSEDYFPFESLLDR--HVNHKKGC 164 Query: 185 YIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKK 237 Y+GQE VSR+ HR +KR + I G + +P + + + + GT+ G Sbjct: 165 YLGQEPVSRVHHRGGAQKRLRGLRIEGDEPVPAGAAIVHAERAKAGTVSSAARSPEFGSI 224 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKA 266 AL G ++V G R Sbjct: 225 ALGYI----HRSVFAPGNEVSVDGRRATI 249 >gi|46205197|ref|ZP_00209741.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 115 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+ Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSRA 60 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 D F LE + L+ +L Y+LR+ V + P GV +W+ T + ++ + Sbjct: 61 G-DGFRLETAAERVADLVKRLGLYRLRAKVSLAADPTLGVAAAWDGAETAAETARV 115 >gi|262183527|ref|ZP_06042948.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC 700975] Length = 318 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 30/271 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF Sbjct: 16 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 74 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERFS 121 L++ ++ +SL D L S V +E V+ Q +++ ++ Sbjct: 75 LDVPTAQFESLRDFLTAMVFWSQVTVEEAD-AAVITVLGQPLQKPSAALVERSVQWPGCP 133 Query: 122 IADVLLHRTWGHNEKIA--------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--- 170 D L+ R + + Y R+ + D H+ Sbjct: 134 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDL-DEKTIAHEVPQW 192 Query: 171 ---LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224 D+ + L KGCY GQE V+R+++ + +++ P SG+ I Sbjct: 193 IRRNDDVPAFVHLEKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPERPDSGADITLGG 252 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250 +G LG VV G AL + + ++H Sbjct: 253 RRVGRLGTVVEDCDYGPIALGLIKRSALNHG 283 >gi|311740216|ref|ZP_07714048.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC 33035] gi|311304771|gb|EFQ80842.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC 33035] Length = 354 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 106/294 (36%), Gaps = 37/294 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I+V GK A FL +++ + P G+ L QG IL + I + +D F+ Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRT-DDAFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----NSSFIDERFS 121 +++ ++ DSL L S V +E I + L + + + Sbjct: 110 IDVPGAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWPGIK 169 Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 D+ + R + + + + R+ + D + PH+ Sbjct: 170 RVDLGIPRESLVEATKHLEESGARLAGLMAFTAERVRAREPELAADL-DNKSIPHEVSQW 228 Query: 174 LLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224 + + L KGCY GQE V+R+++ + + + P G I + Sbjct: 229 ISRSTANPAHVHLNKGCYRGQETVARVENLGRSPRLLVQLHLDGSAPQRPNVGDDITFNG 288 Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA---SFPH 270 ++G +G +V G AL + + A+ G L V S P Sbjct: 289 RKVGRIGTIVDDCDFGPIALGLVK----RSALDAGT-LEVGDTAASIDPSSIPE 337 >gi|16331555|ref|NP_442283.1| hypothetical protein slr0635 [Synechocystis sp. PCC 6803] gi|1001622|dbj|BAA10353.1| slr0635 [Synechocystis sp. PCC 6803] Length = 312 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 104/303 (34%), Gaps = 48/303 (15%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L S I + G+ FL T V + + G+ L + + + Sbjct: 12 LYPLPEFSLIALQGEDRRRFLHNQTTNAVEARAVGEWFETVFVNSTGRTLELATVY-VRQ 70 Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEI--------------------------- 94 D+ L+++ ++D L + + V + Sbjct: 71 DSLWLQVEAGQKDFLWQWMDRFIFPFDKVELRDLSAHYRAVVLLGEKVEEHNLGWQLPTG 130 Query: 95 -----QPINGV--VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 Q + GV ++S + I + L+++ WGH I D + L Sbjct: 131 NQWLAQSVQGVELLISAQTGLDLPGYTVIFP--ADQQELVNQLWGHLPLINPD--QWESL 186 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI G + P +A + IS TKGCYIGQE ++R+ +++R I Sbjct: 187 RIYQGRPQAGKELT-EDYNPLEAGL--WRAISFTKGCYIGQETIARLNTYQGVKQRLWRI 243 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 T D +G+ I + ++G L V G L + VD +GM + + Sbjct: 244 TL-DRQAEAGTVITLEGQKVGILTSVKGLTGLGYLKTKLVD----QGMTVQLGEAIATVE 298 Query: 268 FPH 270 P Sbjct: 299 KPP 301 >gi|115372192|ref|ZP_01459503.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1] gi|115370894|gb|EAU69818.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1] Length = 358 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 58/317 (18%) Query: 3 SVYLSN---QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 +V L + + +++ G+ FL ++T DV L +A++T +G ++ + K Sbjct: 42 AVALHDASYRETLRITGEDRASFLHGMVTQDVKGLAPGATAYAALITAKGAMVADARLLK 101 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--- 116 + D +++++ + + L Y + + + +L T + Sbjct: 102 RDTD-LLMDLEPGTGAKVREFLDKYLISEDAELHEATGEWALLRLLGPKTPEVLAAALGA 160 Query: 117 ------------------------DERFSIADVLLHRTWGHNEKIASDI----------- 141 F+ V L E + + Sbjct: 161 PFEPLASPASRQVTLAGAPVVVLGPPAFAPQGVDLWVPREALEPVWRALVAAGAAHGLKP 220 Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + LR+ G+ D + T P +A + + IS KGCYIGQEV++R R Sbjct: 221 LGFQALELLRVEAGVPRYGQDMV-DTTIPLEANL--THAISYNKGCYIGQEVIARATFRG 277 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 + ++ + + G+ + + ++G L VV + AL D +D Sbjct: 278 HMNRKLTGLLLGEAEAEPGTELRKGEKKVGWLTSVVRSPAQGQRVALGYVHRDHLD---- 333 Query: 253 KGMALTVHGVRVKASFP 269 G LT+ P Sbjct: 334 PGTELTLGEGPTVKVAP 350 >gi|148244472|ref|YP_001219166.1| hypothetical protein COSY_0317 [Candidatus Vesicomyosocius okutanii HA] gi|146326299|dbj|BAF61442.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 223 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 50/225 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +KV G A FLQ ++ D++++ + +A QGK++ F ++K + D F L + Sbjct: 7 LKVSGVDAQSFLQGQLSNDIVSIGENEWQLNAYCQHQGKVIALFWVTKYKND-FYLNFPK 65 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 S +D + L + L S+V I Sbjct: 66 SLQDKIFKHLHIFVLMSDVEI--------------------------------------- 86 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN-GISLTKGCYIGQE 189 + + TY + + P + S F P + +D+ G++ +KGCY GQE Sbjct: 87 -----VQTSFNTYPPIDVMK---HPEVYLITSEKFVPQELNLDINEVGVNFSKGCYPGQE 138 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +V+R+ + ++R + L I D + G+VV Sbjct: 139 IVARLHYLGKPKRRMRLFECEQILKVGDKLIALDSKSVKASGIVV 183 >gi|226226002|ref|YP_002760108.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27] gi|226089193|dbj|BAH37638.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27] Length = 357 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 40/274 (14%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + ++ G A L ++T DV L ++ +A LTP+GK++ I + +EDTF++ Sbjct: 50 WRWTRIQGPKAADALNGLVTNDVTLLAVNASQYAAALTPKGKMVADMTIVRADEDTFLVG 109 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--------DERF 120 +D + + Y + + + +W ++ R Sbjct: 110 VDAGAVEGWLGLARKYINPR--LARTTDESALWNTWAIYGRNIATALQSLGIGENGAARI 167 Query: 121 SIADVLLHRTWGHNE------------------------KIASDIKTYHELRINHGIVDP 156 AD+ + S RI G Sbjct: 168 GDADIRVVPGPTLAGMSGVWLIVPTDHAEHVRERIVAICGPESGAAVAELARIEGGRPSM 227 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D P +A +D L+ IS TKGCY GQE V+R+ R + + ++ L Sbjct: 228 FMDM-DENTIPQEANLDTLDAISFTKGCYTGQETVARVHFRGHVNRHLRAVSSPVPLTRG 286 Query: 217 GSPILTDDIEIGTLGVVV-----GKKALAIARID 245 S + +G + G A+A+ R + Sbjct: 287 TSLVDDAGKVVGEVRSSAISPRLGPIAIALVRRE 320 >gi|313215504|emb|CBY16216.1| unnamed protein product [Oikopleura dioica] Length = 191 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 13/162 (8%) Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 +FID R R + ++ YH R GI + + + FP + Sbjct: 15 GDTFIDPRLEKMGA---RVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECN 71 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 DL++G+S KGCY+GQE+ +R H + RKR + + + P + + G + Sbjct: 72 CDLMSGVSFHKGCYLGQELTARTFHTGVTRKRIVPLKFS---PGNDVSDIKAKRSAGKII 128 Query: 232 VV-VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 V LA+ R D D +K V + + P W+ Sbjct: 129 TVDSEGNGLAMFRTDNFDKTVK------VGEEEIVITKPSWW 164 >gi|310818801|ref|YP_003951159.1| glycine cleavage system t protein [Stigmatella aurantiaca DW4/3-1] gi|309391873|gb|ADO69332.1| Glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 105/308 (34%), Gaps = 55/308 (17%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ G+ FL ++T DV L +A++T +G ++ + K + D +++ Sbjct: 26 RETLRITGEDRASFLHGMVTQDVKGLAPGATAYAALITAKGAMVADARLLKRDTD-LLMD 84 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------------ 116 ++ + + L Y + + + +L T + Sbjct: 85 LEPGTGAKVREFLDKYLISEDAELHEATGEWALLRLLGPKTPEVLAAALGAPFEPLASPA 144 Query: 117 ---------------DERFSIADVLLHRTWGHNEKIASDI--------------KTYHEL 147 F+ V L E + + + L Sbjct: 145 SRQVTLAGAPVVVLGPPAFAPQGVDLWVPREALEPVWRALVAAGAAHGLKPLGFQALELL 204 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D + T P +A + + IS KGCYIGQEV++R R + ++ + Sbjct: 205 RVEAGVPRYGQDMV-DTTIPLEANL--THAISYNKGCYIGQEVIARATFRGHMNRKLTGL 261 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261 + G+ + + ++G L VV + AL D +D G LT+ Sbjct: 262 LLGEAEAEPGTELRKGEKKVGWLTSVVRSPAQGQRVALGYVHRDHLD----PGTELTLGE 317 Query: 262 VRVKASFP 269 P Sbjct: 318 GPTVKVAP 325 >gi|269124918|ref|YP_003298288.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183] gi|268309876|gb|ACY96250.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183] Length = 328 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 20/267 (7%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 N+ I+V G + +L ++++ + L + +L+P G++ + + + + Sbjct: 46 NRGVIRVSGPDRLKWLHSLLSQHLEHLEPHRPTQALLLSPHGRVEHHLHLV-DDGEAVWA 104 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------QEHTFSNSSFIDERF 120 ++ +L++ L + V + V++ + + SS+I ER Sbjct: 105 HVEVGTAPALVEFLDRMRFLLRVEVADLTDRYAVVTGAVDVPGALEFPDVAGSSWIIERS 164 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + L R + + Y LRI D PH+A + + L Sbjct: 165 A-----LPRLPEAARP--AGLWAYEALRIAAHRPRLGLD-TDERTIPHEAGW-IDEAVHL 215 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKK 237 KGCY GQE V+R+ + +R +++ LP G P+ +G +G Sbjct: 216 NKGCYRGQETVARVHNLGRPPRRLVMLHLDGSVDHLPAHGDPVELGGRRVGFVGTAARHH 275 Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264 L + V + L GV Sbjct: 276 ELGPIALAMVKRTVPVDAELLAGGVAA 302 >gi|289804664|ref|ZP_06535293.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 281 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 35/224 (15%) Query: 28 TADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLR 87 TADV + + +A +GK+ + + + +E RS R++ + +L Y + Sbjct: 1 TADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRERDGFAWIE-RRSVREAQLTELKKYAVF 59 Query: 88 SNVIIEIQPINGVV------------------------LSWNQEHTFSNSSFIDERF--- 120 S V+I ++ + + T ERF Sbjct: 60 SKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPAERFLLV 119 Query: 121 ---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 + A++L + G E ++ + + L I GI + P + L G Sbjct: 120 TDVATANMLTEKLHGEAE--LNNSQQWLALDIEAGIPVIDA-ANSGQFIPQATNLQALGG 176 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220 IS KGCY GQE+V+R + R ++ ++ G +P +G + Sbjct: 177 ISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDL 220 >gi|260578351|ref|ZP_05846266.1| aminomethyltransferase [Corynebacterium jeikeium ATCC 43734] gi|258603532|gb|EEW16794.1| aminomethyltransferase [Corynebacterium jeikeium ATCC 43734] Length = 410 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 107/324 (33%), Gaps = 67/324 (20%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ I+V G +L +I+ V + A IL +G + +F I ED IL Sbjct: 61 DRVAIRVSGPERRDWLNNLISQKVNAIEPGQATFGLILDVKGHVEHFFGILAT-EDALIL 119 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA---- 123 + + D+L D L S V +E P + + T S+ D S A Sbjct: 120 DTPATHADALEDYLSKMVFWSQVSVERLPWARLTVIGTDLATDSSLFTYDATSSAALPAQ 179 Query: 124 ---------DVLLHRTWGHNEKIASDIK-----------------------TYHELRINH 151 D+ L RT E A D+ Y R+ Sbjct: 180 LKINVPENIDLQLWRTGTIGELQALDLWVSREGFTRSWDELNNIAQPTGRMAYDAFRVQA 239 Query: 152 GIVDPNTDFLPSTIFPHDA-------------LMDLLNG-----ISLTKGCYIGQEVVSR 193 D PH+ L D+ G + L KGCY GQE VSR Sbjct: 240 RQPVLGVD-TDDRAIPHEIPAFIGRGISGATQLDDVSAGPTEAAVHLNKGCYRGQETVSR 298 Query: 194 IQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR-- 243 + + + +++ LP G+ + IG +G V G ALA+ + Sbjct: 299 VHNLGKSPRVLVMLQLDGSANRLPEVGAELTAGGRAIGRVGSSVHDCDYGPIALALVKRN 358 Query: 244 -IDKVDHAIKKGMALTVHGVRVKA 266 ++K+ L G+ Sbjct: 359 VVEKLASKNSDVPPLLADGIDASI 382 >gi|38234484|ref|NP_940251.1| hypothetical protein DIP1917 [Corynebacterium diphtheriae NCTC 13129] gi|38200747|emb|CAE50450.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 353 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 105/290 (36%), Gaps = 28/290 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G+ A FL +++ ++ LP+ A + L QG ++ + I +E F Sbjct: 45 SHRGVLCISGEDAAVFLNNLVSQKLIDLPHPWAGEALDLDIQGHVVHHMEIIATDE-VFY 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------GVVLSWNQEHTFSNSSFI 116 + + ++ +SL S V IE+ ++ + S I Sbjct: 104 VHVPAAQLESLHTFFTRMIFWSKVTIEVIDAAVISVISAQHLDALVDVPLPEALAVSPVI 163 Query: 117 DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D D+L+ R + + + Y R+ + D +T PH Sbjct: 164 DFSLPRRDILVPRASLMAVAASLQEHGFQPAGMMAYTAARVRSVQPVMSLDM-DATTIPH 222 Query: 169 DA-----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220 +A D + + L KGCY GQE V R+++ + +++ P +P+ Sbjct: 223 EAASLIGRGDHIGAVHLNKGCYRGQETVGRVENLGRSPRVLVMVLIDGSAPEQPHPAAPL 282 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 +G LG VV L + V + K L + P Sbjct: 283 TAGGRTVGFLGTVVDDFELGPIGLAVVKRSALKSATLQAGDDVALSIDPD 332 >gi|68535437|ref|YP_250142.1| putative aminomethyltransferase [Corynebacterium jeikeium K411] gi|68263036|emb|CAI36524.1| putative aminomethyltransferase [Corynebacterium jeikeium K411] Length = 424 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 105/324 (32%), Gaps = 67/324 (20%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ I++ G +L +I+ V + A IL +G + +F I +D IL Sbjct: 75 DRVAIRISGPERRDWLNNLISQKVNAIAPGQATFGLILDVKGHVEHFFGILAT-DDALIL 133 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA---- 123 + + D+L D L S V +E P + + S+ S D A Sbjct: 134 DTPATHADALEDYLRKMVFWSQVTVERLPWARLTVIGTGLVADSSLSLNDATSPAALPDQ 193 Query: 124 ---------DVLLHRTWGHNEKIASDIK-----------------------TYHELRINH 151 D+ L R E D+ Y RI Sbjct: 194 LKIDIPDDLDLQLWRFGTIGEMQTLDLWVSRDYFVDTWDQFTDVATPAGRMAYDAFRIQA 253 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGIS------------------LTKGCYIGQEVVSR 193 + D PH+ + GIS L KGCY GQE VSR Sbjct: 254 RLPILGVD-TDERAIPHEVPAFIGRGISGATQLDDVAAGPTEAAVHLNKGCYRGQETVSR 312 Query: 194 IQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR-- 243 + + + +++ LP G+ + IG +G V G ALA+ + Sbjct: 313 VHNLGKSPRVLVLLHLDGSANRLPKVGADLTAGGRAIGRVGSSVHDCDYGPVALALVKRN 372 Query: 244 -IDKVDHAIKKGMALTVHGVRVKA 266 ++KV + L G+ Sbjct: 373 VVEKVASKNSEVPPLLADGIDASI 396 >gi|21672687|ref|NP_660754.1| hypothetical protein BUsg420 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091589|sp|Q8K9C6|YGFZ_BUCAP RecName: Full=tRNA-modifying protein ygfZ gi|21623327|gb|AAM67965.1| unknown protein from 2d-page (spot pr51) [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 319 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 98/267 (36%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ L I +CG + LQ T D+ L + + A GK+ I Sbjct: 19 LTLSLLEEWCLIYICGIDSKKHLQNQFTIDINCLKKEEYKLCAHCNFNGKVWATMFIFHY 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID-- 117 ++ + I +S I +L Y + S V I E+ I LS F + +F+D Sbjct: 79 KKGFAYI-IRKSIAKIQIKELKKYAIFSKVEIRELDDIYLFGLSGFNAKFFLSKNFVDIP 137 Query: 118 ---------------------ERFSIADVLLHRTWGHNEK----IASDIKTYHELRINHG 152 ERF + L ++ + ++ K + I G Sbjct: 138 NKNCSLISNQDRTILWFSEPCERFLLVLSLKDLLLLKRKENEITLLNNSKQWLLFDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P + LL +S KGCY GQE ++R+ ++N+ + +++ + Sbjct: 198 FPIIDKQ-TSQKFLPQSINLILLQAVSFDKGCYYGQETIARVFYKNLNKYSLYLLSSKGN 256 Query: 213 L-PPSGSPILTDDIE----IGTLGVVV 234 + P GS I E IG L +V Sbjct: 257 INPKIGSIIEMKKEEKWYRIGFLLAIV 283 >gi|159029184|emb|CAO87544.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 337 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 45/304 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + S+ +++ G+ + FL + + L + L G+ L F+ + Sbjct: 33 LIDRSHWGLLELKGQDRLRFLHNQTSNAIDRLKPGQGCETIFLNSTGRTL-DFVTVYAGD 91 Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTF----------- 110 D+ ++ + +R L++ + Y V I N + + + Sbjct: 92 DSLLILVSPQRRQFLLELIDRYIFPFDKVEISDLTDNFSIFTLIGTESGQYLQKIAVPEQ 151 Query: 111 -------SNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDIKTYH 145 S+ D +A L N +D + + Sbjct: 152 ILTGVQHSHYLLSDPPLRVAVGTGLDIPGYTLIVAASEAGPLWENLIKNGVTPADEQVWE 211 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LRI+ G + + P +A + I KGCYIGQE ++R+ +++R Sbjct: 212 YLRIHQGRPAVDRELT-EDYNPLEAGL--WRAIVFDKGCYIGQETIARLNTYKGVKQRLW 268 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 I + +P S +PI+ + ++G L V+ L + +K + + Sbjct: 269 GIKLSQPVP-SNTPIILEAQKVGLLTSVLEDFGLGYVKTKAGGEGLKVQIGEATGEL--- 324 Query: 266 ASFP 269 S P Sbjct: 325 ISLP 328 >gi|119718469|ref|YP_925434.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides sp. JS614] gi|119539130|gb|ABL83747.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides sp. JS614] Length = 324 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 100/271 (36%), Gaps = 16/271 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KI 60 V LS++ +++ G + +L ++ T L ++ G+ +L+PQG + F Sbjct: 42 VDLSHRDVVRISGPDRLTWLHSLTTQHFEALAPRLWTGALVLSPQGHVEHAFFGYDDGGG 101 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++ F + +L++ L + V E+ + + + + + Sbjct: 102 DDGAFTAHTEPGAAAALVEFLDRMRFMMRV--EVADVTDELAVTWRPSASAEGPYAGYEL 159 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 D L + A + + LRI G D P++A + + L Sbjct: 160 IRRDQLT--AYAEAAGPACGLWAFEALRIARGEPRLGLD-TDHRTIPNEAGW-IGPAVHL 215 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL----TDDIEIGTLGVV 233 KGCY GQE V+R+ +R ++ LPP G+ +L D +G +G Sbjct: 216 DKGCYRGQETVARVHTLGRPPRRLTLLHLDGSENRLPPVGADLLLGDPADGKVVGFVGTS 275 Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 L + V + LTV G+ Sbjct: 276 ARHYELGPIALAMVKRNVPLDAPLTVDGMPA 306 >gi|225166049|ref|ZP_03727792.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2] gi|224799709|gb|EEG18195.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2] Length = 321 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 109/286 (38%), Gaps = 38/286 (13%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + +++ G+ A FLQ I+ + T + A L +GK++ K+ + + L Sbjct: 21 AVLRLTGEDASSFLQGQISQETRTTLPQPAIYGLFLNHKGKVIADAYALKVSDAEWWLWS 80 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADV-- 125 + S + L L + + +V IE + + + L+ E S S+ I + A Sbjct: 81 EASPANVLAHHLESFIVADDVTIEDRSGDWTLTTLAGPSEAAASLSALIGQPLPEAGAYA 140 Query: 126 --------LLHRTWGHNEKIASDIKT------Y--------HELRINHGIVDPNTDFLPS 163 R G + K + + RI GI D P Sbjct: 141 RVGEGFMFRGRRGLGDSWKWLAPAAAQPTLDGWTPPDPMLMERARIEAGIPRVPVDIGPG 200 Query: 164 TIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPIL 221 PH+ + + IS TKGCY+GQE+++R++ +R+R + + G +P + + + Sbjct: 201 D-LPHEGGPEFVAASISYTKGCYLGQEIMARLK-SGQVRRRLVRVRGEGVVPEALPATLY 258 Query: 222 TDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTV 259 D G L V G LA+ + + + ++ Sbjct: 259 RDGRAAGELRSAVAAGSDRSGGFAGLALVTLAGLAGGSTAQVTFSI 304 >gi|33519725|ref|NP_878557.1| putative aminomethyltransferase [Candidatus Blochmannia floridanus] gi|81666840|sp|Q7VRF7|YGFZ_BLOFL RecName: Full=tRNA-modifying protein ygfZ gi|33504070|emb|CAD83331.1| aminomethyltransferase; glycine cleavage T-protein [Candidatus Blochmannia floridanus] Length = 336 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 41/259 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ ++L N IK+ G I +L T D+ L +A G+++ + I Sbjct: 20 LTLMFLKNWILIKLQGTDIIQYLHNQFTCDIKNLNKNQYSFAAHCNFNGRMISNMYVFYI 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96 + I + Y SNV I P Sbjct: 80 NNQKIAFIEPLNIHHKQISIMQKYATFSNVTITPDYNVTLIGASGLYVKKYLNTFFTTLP 139 Query: 97 INGVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRI 149 ++ T + +RF +I D LL++T + + L I Sbjct: 140 DTKNMVIHYPGITLLHFKLPIDRFLLIIYDQTILDFLLNKT-QSFPIYYNSYHQWTALDI 198 Query: 150 NHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G DF S +F P A MD+L GIS KGCYIGQE+V+RIQH + ++ +T Sbjct: 199 EAGYP--YIDFATSELFFPQAANMDILQGISFNKGCYIGQELVARIQHYKLNKQSLYQLT 256 Query: 209 GT------DDLPPSGSPIL 221 + LP SG I+ Sbjct: 257 SNTYHNQHNQLPVSGDHIV 275 >gi|145296576|ref|YP_001139397.1| hypothetical protein cgR_2484 [Corynebacterium glutamicum R] gi|140846496|dbj|BAF55495.1| hypothetical protein [Corynebacterium glutamicum R] Length = 373 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 34/287 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 132 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119 L+ ++ D+LI L S V +E + + L QE + ++ F R Sbjct: 133 LDTSAAEFDTLIGFLTKMIFWSEVTVEEADLAIITL-LGQEISLPDAVFARRVDWNGPSR 191 Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170 +A + G ++ + + K Y R+ D PH+ Sbjct: 192 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 250 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226 + L + LTKGCY GQE V+R+ + + +++ P +G+ I Sbjct: 251 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 310 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 +G LG VV G AL + + +D L + V V Sbjct: 311 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 351 >gi|116626954|ref|YP_829110.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Solibacter usitatus Ellin6076] gi|116230116|gb|ABJ88825.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Solibacter usitatus Ellin6076] Length = 289 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 96/277 (34%), Gaps = 41/277 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + I V G+ L AI + +V + + +L+PQG+I + ED Sbjct: 15 IDLSKRGRIAVRGRDRARLLHAITSNEVKKMTPGSGCYAFLLSPQGRIQADLNLFCF-ED 73 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F+++ + R+ ++ + Y + V +E + + + + Sbjct: 74 RFLIDTEPELREKVLPHIKKYIIADQVELEDVSAETAAIGLEGPSAATILATLGAPVPGT 133 Query: 124 D-------------------------------VLLHRTWGHNEKIASDIKTYHELRINHG 152 D R + +A+ RI +G Sbjct: 134 DYSHVAWDDATIAAVTVTGQPGVRIFCPLEKAAAFVRQFESAGAMAASEDDVRLARIENG 193 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P + ++ +S TKGCYIGQE+V RI+ + + K+ + Sbjct: 194 RPRYGEDI-RDTSLPQET--QQMHAVSFTKGCYIGQEIVERIRAQGRVNKKLTRVVLPGS 250 Query: 213 -LPPSGSPILTDDIEI----GTLGVVVGKK-ALAIAR 243 LP G D + L V G+ ALA R Sbjct: 251 TLPAHGDKTTIDGADAEVTSAVLSPVSGEIVALAYVR 287 >gi|311743212|ref|ZP_07717019.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272] gi|311313280|gb|EFQ83190.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272] Length = 318 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 24/271 (8%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS++ + V G + +L A+ T +L LP +L+PQG+I F + Sbjct: 46 TFVDLSHRDVVTVAGPDRLTWLHALTTQYLLDLPPGRPTDVLLLSPQGRIEHAFTGV-DD 104 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 TF + + L++ L + S V + + V+ Sbjct: 105 GATFTVHTEPGAGAPLVEFLDRMRFMSRVEVTLATDQWAVIGLPGLA------------- 151 Query: 122 IADVLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 +V + D + LRI G D P++ + L + + Sbjct: 152 -WEVRPRADLASLPAVLGDPVGSWAWEALRIEAGRPRIGLD-TDERAIPNELGL-LGSAV 208 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-DDIEIGTLGVVV 234 L KGCY GQE V+R+ +R + + LPP G+ +L +G +G Sbjct: 209 HLDKGCYRGQETVARVHTLGRPPRRLVRLHLDGSVDHLPPVGTDLLDPAGTRVGAIGTSA 268 Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 L + V + + LT GV Sbjct: 269 RHHELGPVALGVVKRNVDPTLVLTADGVPAS 299 >gi|223936903|ref|ZP_03628812.1| folate-binding protein YgfZ [bacterium Ellin514] gi|223894472|gb|EEF60924.1| folate-binding protein YgfZ [bacterium Ellin514] Length = 363 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 102/292 (34%), Gaps = 55/292 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +S I + G + FL +T +V L +A++T +GK+ I + +D Sbjct: 48 LSFRSRICLTGADRVRFLHGQVTNNVQGLRTGTGCYAALVTAKGKLQSDLNIYAL-KDEL 106 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV-LSWNQEHTFSNSSFID------ 117 +L+ + + ++L Y + +V II++ G + + + S +D Sbjct: 107 LLDFEPGLTKVVSERLEKYIIADDVQIIDVAAAYGQLSIQGPKSEAAIRSLGLDLEIPAQ 166 Query: 118 --------------------ER-----------FSIADVLLHRTWGHNEKIASDIKTYHE 146 R + + ++ + Sbjct: 167 PLTLTSINNPNLGEIYLMNHPRTGGVGFDLFVPTPALGAVADKLIAAAKQQGGSAGGWTA 226 Query: 147 L---RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 L RI G+ D + + P IS +KGCYIGQEV++RI+ + K Sbjct: 227 LERARIEAGLPRFGADMDETNLAPEAI---EARAISYSKGCYIGQEVIARIRTYGQVAKA 283 Query: 204 PMIITGTD---DLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDK 246 + D LP G + D E+G + V G AL R + Sbjct: 284 LRGLRLDDKLKTLPAKGDKLFHDGKEVGYITSAVSSSKLNGNFALGYVRKEA 335 >gi|166366232|ref|YP_001658505.1| aminomethyltransferase [Microcystis aeruginosa NIES-843] gi|166088605|dbj|BAG03313.1| aminomethyltransferase [Microcystis aeruginosa NIES-843] Length = 337 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 42/297 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + S+ +++ G+ + FL + + L + L G+ L F+ + Sbjct: 33 LIDRSDWGLLELKGQDRLRFLHNQTSNAIDRLKPGQGCETIFLNSTGRTL-DFVTVYASD 91 Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTF----------- 110 D+ ++ + +R L++ + Y V I N + + + Sbjct: 92 DSLLILVSPQRRQFLLELIDRYIFPFDKVEISDLTDNFAIFTLIGTESGQYLQKIAIPEQ 151 Query: 111 -------SNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDIKTYH 145 S+ D +A L N +D + + Sbjct: 152 ILTGVQHSHYLLSDPPLRVAVGTGLDLPGYTLIVAAAEAGPLWENLIKNGVTPADEQVWE 211 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LRI+ G + + P +A + I KGCYIGQE ++R+ +++R Sbjct: 212 YLRIHQGRPAVDRELT-EDYNPLEAGL--WRAIVFDKGCYIGQETIARLNTYKGVKQRLW 268 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 I + +P S +PI+ + ++G L V+ L + +K + + Sbjct: 269 GIKLSQPVP-SNTPIILEAQKVGLLTSVLEDFGLGYVKTKAGGEGLKVQIGEATGEL 324 >gi|227547970|ref|ZP_03978019.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium lipophiloflavum DSM 44291] gi|227079981|gb|EEI17944.1| glycine cleavage T-protein (aminomethyl transferase) [Corynebacterium lipophiloflavum DSM 44291] Length = 377 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 28/269 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G A FL +++ ++ P A + L QG IL + +S + Sbjct: 73 SHRKVIAVSGPDAPTFLNNLLSQKLVDAPEGFAASALDLDIQGHILHHADVSYANG-VYY 131 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----SI 122 L+ + ++LI L S V I + GV+ + ++ R Sbjct: 132 LDTPAHQHETLIAFLTKMVFWSQVSINDTEL-GVLTVVGDAPAVAEAAVTRTRPWGETQR 190 Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA---- 170 DVL+ R + + + LR+ G + D PH+A Sbjct: 191 TDVLVERGRVGEVVDKLRDQGVRLAGLMAFTALRVRAGEPELRADL-DEKSIPHEAPSLI 249 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIE 226 + + L KGCY GQE V+R+++ + +++ P G+ I Sbjct: 250 NRGPYVGAVHLAKGCYRGQETVARVENLGRSPRLLVMLHLDGSAPVDPVPGAAITLAGRG 309 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHA 250 +G LG V G ALA+ + ++ A Sbjct: 310 VGRLGTVAHDADYGPIALALVKRSALNSA 338 >gi|296118897|ref|ZP_06837470.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM 20306] gi|295967995|gb|EFG81247.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM 20306] Length = 359 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 33/292 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I V G A FL +++ + T+ + + L QG+IL Y + + +D F Sbjct: 45 SQRRVISVVGPDAPEFLNNLLSQKLDTVDPGYSAAALDLDIQGRILHYSDVVRT-DDGFY 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFI------ 116 L+ ++ +S L S V + + V L + ++F+ Sbjct: 104 LDTTAAEFESFFKFLTMMIFWSKVEVTEADLAIVSLLGTLPELPTKVQEAAAFVRKVENW 163 Query: 117 --DERFSIADVL-----LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI---F 166 R IA + + + + Y R+ + + D +I Sbjct: 164 TETPRTDIAVPREQLREMAQELIDAGFKPAGLMAYTAERVRNLEPERAADLDDKSIAHEI 223 Query: 167 PHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILT 222 PH +L + L KGCY GQE ++R+++ + + + ++P +G+ I + Sbjct: 224 PHWIGRGELQGAVHLEKGCYRGQETIARVENLGRSPRLVVRLYLDGSVPEMPETGADITS 283 Query: 223 DDIEIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVHGVRVKA 266 +G +G ++ G AL + + + K D + L + Sbjct: 284 GGRRVGRVGTIIDDFELGPIALGLIKRSALPKPDKPDSEAPELLIGECAATV 335 >gi|271962471|ref|YP_003336667.1| LigA [Streptosporangium roseum DSM 43021] gi|270505646|gb|ACZ83924.1| LigA [Streptosporangium roseum DSM 43021] Length = 328 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 103/272 (37%), Gaps = 13/272 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ ++V G + +L ++ + + L A + +L QG++ + + + + Sbjct: 45 SNREVVRVSGPDRLSWLNSLSSQKLDDLKPGQATQTLLLDAQGRVEHHLTLV-DDGEAVW 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 ++ L+ L + V + + V+S + + + DVL Sbjct: 104 AHVEPGTSAELVAFLDKMRFMLRVEVADVTADYAVVSVADAARLTPPAGAVP--AGDDVL 161 Query: 127 LHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 L R + + + Y LRI + PH+ + + L+KG Sbjct: 162 LPRELLADRLGGLRLAGLWAYEALRIEGHRPRLGFE-TDHKTIPHEVGW-IGAALHLSKG 219 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 CY GQE V+R+ + +R + + D LP G+P++ D++E+G +G L Sbjct: 220 CYKGQETVARVHNLGHPPRRLVFLHLDGSVDTLPKHGAPVVHDEVEVGFVGSSARHHELG 279 Query: 241 IARIDKVDHAIKKGMALTVHGVRV--KASFPH 270 + V + L GV + P Sbjct: 280 PIALAVVKRTVPVDATLQAEGVAATQEVIVPP 311 >gi|71064739|ref|YP_263466.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4] gi|71037724|gb|AAZ18032.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4] Length = 255 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 41/275 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +++V L+ S + + G+ A FLQ +T +V L + +AI +G+I I K Sbjct: 5 INAVTLAQFSQLSIQGEDAEKFLQGQLTCNVTKLGLSY-QAAAIGNLKGRIEFGIWIKKQ 63 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDER 119 E + + I ++L L + S PI V+ + TFS+ Sbjct: 64 AEKHYDVVISTDCAEALQGHLKKFGAFSKFDTSTPMPIYPCVI--DNVPTFSHQ------ 115 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDALMDLL 175 + + +I+ + + I G + +F P + + Sbjct: 116 -------------DDYNTSENIQAWMQSSIATGNYWIVAATQGEFQ-----PQELRLHQR 157 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLG 231 G+ KGCY+GQEV++RI ++ + + GT P+ L + + Sbjct: 158 GGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPAAGEKLDKVQVVNAIT 217 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G +AL +AR +++ LT+ + + Sbjct: 218 TSEGFEALVVARPEQLAE-----SGLTILDLPLAL 247 >gi|153005639|ref|YP_001379964.1| glycine cleavage T-protein barrel [Anaeromyxobacter sp. Fw109-5] gi|152029212|gb|ABS26980.1| Glycine cleavage T-protein barrel [Anaeromyxobacter sp. Fw109-5] Length = 316 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 96/282 (34%), Gaps = 30/282 (10%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 ++ ++ GK A +L + T D+ L + + L+ +G ++ + ED +L+ Sbjct: 35 RAVLRATGKDAQDYLHRMSTQDLARLRPGESAYATFLSAKGHLVAEGHVLAR-EDGILLD 93 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL- 126 +D + L + V+ E + VV E + + E IA Sbjct: 94 LDPRAQPDAQVHLERLVIMDEVVFEDLSEALRVVPVLGPEAARRLTGRVPEAPRIAHERR 153 Query: 127 ----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 L +A D LRI + D ++ P +A Sbjct: 154 GAPGADVLLPPHEAEALRAELLAEGAVALDEGELEALRILAAVPRFGADM-DASRLPMEA 212 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 + IS +KGCYIGQEVV R R +++ + + P G+ + E+G + Sbjct: 213 GLTRA-AISFSKGCYIGQEVVLRATARGHLQRGLVQLALPGGAGP-GTKLTAGGQEVGVV 270 Query: 231 GVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G+ L R K G + G Sbjct: 271 TSAADTPEGRLGLGYLR----RAHWKPGAVVDAGGQPATVRR 308 >gi|108758208|ref|YP_634466.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622] gi|108462088|gb|ABF87273.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622] Length = 356 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 54/309 (17%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +++ G+ +L ++T +V LP A +A++T +G ++ I K E D +L+ Sbjct: 51 RETLRITGEDRASYLHGMVTQEVNNLPVGTAAYAAMVTVKGAMVADARILKREPD-LLLD 109 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------------------- 102 ++ + + L Y + + + +L Sbjct: 110 LEPGTGAKVREFLDKYLISEDAELHEATGELALLRLLGPRTEDVLSAALGSPHAPLSHHA 169 Query: 103 ----------SWNQEHTFSNSSFID---ERFSIADVL--LHRTWGHNEKIASDIKTYHEL 147 W T +D R + D L + + L Sbjct: 170 ARTATLAGQEVWLLGSTAIEPHGVDVWVPRAGLEDAWRALSEAGAAHGLKPLGFEALELL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D + T P +A + N IS KGCYIGQEV++R R + ++ + Sbjct: 230 RVEAGVPRYGQDMV-DTTIPLEANLA--NAISYNKGCYIGQEVIARATFRGHMNRKLTGL 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261 D G+ + + ++G L VV AL D ++ + + L Sbjct: 287 LLGDADVAPGTELRRGEKKVGWLTSVVQSPVAGQRVALGYVHRDSLEPGTE--LTLAAGP 344 Query: 262 VRVK-ASFP 269 VK AS P Sbjct: 345 ATVKVASLP 353 >gi|220913464|ref|YP_002488773.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6] gi|219860342|gb|ACL40684.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6] Length = 361 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 101/275 (36%), Gaps = 38/275 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L + + V L + +L+ QG+I I + Sbjct: 44 VDLSSRGVVTVTGPDRLSWLNTLSSQQVTALQPGESSELLLLSVQGRIEFDARIV-DDGG 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERFS 121 T L ++ ++ L + L K V I + V+ S ++ D Sbjct: 103 TAWLIVEGAEAAPLAEYLSRMKFMLRVDIADASADWAVVGSTAAVPDWASLVAWQDPWPH 162 Query: 122 IADVL-------------LHRTWGHNEKIASDIKTY------------HELRINHGIVDP 156 ++ L R W A++++ LRI Sbjct: 163 VSAGGYSYATVAEESHPGLERPWFEYLVPAAELEQTVADRPLAGVMSSEALRIAAWRPRI 222 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213 + PH+ + L + L KGCY GQE ++R+ + +R + + L Sbjct: 223 GAE-TDDRTIPHELDL-LRTAVHLAKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTL 280 Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 P +GS +L D ++GT+ V G ALA+ + Sbjct: 281 PAAGSVVLAGDRKVGTVTSVAQHYEMGPVALAVIK 315 >gi|25029029|ref|NP_739083.1| hypothetical protein CE2473 [Corynebacterium efficiens YS-314] gi|259505980|ref|ZP_05748882.1| aminomethyltransferase, gcvt-like protein [Corynebacterium efficiens YS-314] gi|23494316|dbj|BAC19283.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166461|gb|EEW51015.1| aminomethyltransferase, gcvt-like protein [Corynebacterium efficiens YS-314] Length = 421 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 35/285 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ I+V G A FL I++ V + L QG+I +++ + + F Sbjct: 122 SNRKVIRVDGPDAPAFLNNILSQKVDAAEDGFTARALDLDAQGRIQHTMMVT-VADGVFY 180 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---IDERFSI- 122 L+ ++ DSLI L S V +E + + L E +F +D Sbjct: 181 LDTSATEFDSLIAYLRKMIFWSEVTVEEADLAIITLIGR-EIPLPEVTFRRTVDWNGPKR 239 Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA---- 170 DV + R + + Y R+ + L + PH+ Sbjct: 240 VDVAVPRASFESGVDKLLDAGAELTGLMAYWAERVKALEPETPD--LDAKTIPHEIPHWI 297 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS---GSPILTDDIE 226 + L + LTKGCY GQE V+R+ + + +++ P + G+ I + Sbjct: 298 GRDEHLGAVHLTKGCYRGQETVARVDNLGRSPRVMVLLHLDGSAPVAPVTGAEITSGTRT 357 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G LG V+ G AL + + +D LT+ V V Sbjct: 358 VGRLGTVIHDCDLGPIALGLVKRSALDAD------LTIGDVAVTV 396 >gi|172038986|ref|YP_001805487.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp. ATCC 51142] gi|171700440|gb|ACB53421.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp. ATCC 51142] Length = 368 Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 109/301 (36%), Gaps = 53/301 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ + FL T D+ L + + G+ L + + + ED+ + Sbjct: 58 SHWGLLQLTGEDRLRFLHNQTTNDINRLQCGQLCDTVFVNSTGRTL-DLVTTYVTEDSIL 116 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + ++R L + + Y V I + + + + D I Sbjct: 117 LLVSPNRRRFLYEWMDRYIFPMDKVEIRDISEQNAIFTIIGKEAAKKLNQWDIAAQILSE 176 Query: 126 LLHRTWGH-------------------------NEKIASDIKT--------------YHE 146 L R +G E +A + + + Sbjct: 177 LSPRKYGLLTVEEKNIMIGYDTGLNLSGYTLIVPENLAKTVWETVINLGIIPIGDRVWQQ 236 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + P +A + + IS KGCYIGQE ++R+ +++R Sbjct: 237 LRIKQGRPYPDQELT-EDYNPLEAGL--WSSISFDKGCYIGQETIARLNTYQGVKQRLWG 293 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262 + T + +G+ ++ DD ++G L + LA + A +G+ +T+ Sbjct: 294 VKLTQPV-KAGNTVMVDDKKVGILTSSIQLEEECLGLAYVKT----KAGGEGLKVTIGDA 348 Query: 263 R 263 + Sbjct: 349 K 349 >gi|297623936|ref|YP_003705370.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093] gi|297165116|gb|ADI14827.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093] Length = 348 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 105/290 (36%), Gaps = 37/290 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G + FL ++ +V L AR + +L +G L + + E+D F+ ++ Sbjct: 49 LRLTGADRLEFLHGQVSNEVKRLGVGDARAALMLNVRGHALALMRLYRREDDLFVA-VEG 107 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSS-FIDER 119 + + +L + + V + G VL + F+ Sbjct: 108 GAGERVEAQLGAHIIFDQVELHNLTGTLQSLTLQGEAAGEVLQRALHAELPEADRFVQVP 167 Query: 120 FSIADVLLHRTWGHNEK------IASDIKTYHELRINHG---IVDPNTDFLP-------- 162 F A VL+ R + D + E G + + Sbjct: 168 FEGAKVLVSRVARSAPGGFDLHVLTQDARALVEALEGAGAKLVGERALAAARVAAGIAEA 227 Query: 163 -----STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 + P +A ++ +S KGCY+GQE+++RI+ R +R+R + + P Sbjct: 228 ALEGGEGVLPQEAGLEY--AVSYRKGCYLGQEIMARIEARGNVRRRLVGLRLESVPPEGA 285 Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +L + +G LG V L + V H + G L V GV + Sbjct: 286 RELLAEGKVVGRLGTVAEHPQLGTVALASVRHEVGAGAPLLVGGVSATVA 335 >gi|19553777|ref|NP_601779.1| aminomethyltransferase related to GcvT [Corynebacterium glutamicum ATCC 13032] Length = 373 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 109/287 (37%), Gaps = 34/287 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 132 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119 L+ ++ D+LI L S V ++ + + L QE ++ F R Sbjct: 133 LDTSAAEFDTLIGFLTKMIFWSEVTVQEADLAIITL-LGQEIALPDAVFARRVDWNGPSR 191 Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170 +A + G ++ + + K Y R+ D PH+ Sbjct: 192 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 250 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226 + L + LTKGCY GQE V+R+ + + +++ P +G+ I Sbjct: 251 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 310 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 +G LG VV G AL + + +D L + V V Sbjct: 311 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 351 >gi|308814228|ref|XP_003084419.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri] gi|116056304|emb|CAL56687.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri] Length = 248 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 33/250 (13%) Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFILEIDRSKRDSL--- 77 +T DV A A LTP GKI++ ++ ++ D ++L++D +K D + Sbjct: 1 MTCDVAR--CGRATYGAALTPNGKIVVDAFVAALDGDATRGTGEYVLDVDAAKMDEVRCR 58 Query: 78 --IDKLLFYKLRSNVIIEIQ-PINGVVLSWNQEHTFSNSSFIDERFSIAD--VLLHRTWG 132 + L LR ++E VV+S E + D R A L R Sbjct: 59 RTMKWLRRMSLRKRCVVEDAREAFDVVVSTRAEDGLA----PDPRSRTASGVALGFRGVA 114 Query: 133 HNEKIAS--DIKTYHE-LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 A+ D H RI G+ + + FP + D L+ +S +KGCY+GQE Sbjct: 115 AKSSSAAREDATFLHASHRIALGVGEGYEEL--GGTFPLECNFDALDAVSFSKGCYVGQE 172 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPS------GSPILTD-DIEIGTL-GVVVGKKALAI 241 +R + R +RKR + + + G ++ + +G + V G +AL Sbjct: 173 NTARQRFRGAVRKRVAPVVLREGVGRERARELIGQSVVNERGDRVGEVIASVDGARALVR 232 Query: 242 ARIDKVDHAI 251 AR+ + A+ Sbjct: 233 ARVQFLRDAL 242 >gi|62391419|ref|YP_226821.1| aminomethyltransferase, GCVT-like protein [Corynebacterium glutamicum ATCC 13032] gi|21325353|dbj|BAB99974.1| Predicted aminomethyltransferase related to GcvT [Corynebacterium glutamicum ATCC 13032] gi|41326760|emb|CAF21242.1| PUTATIVE AMINOMETHYLTRANSFERASE, GCVT HOMOLOG [Corynebacterium glutamicum ATCC 13032] Length = 367 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 109/287 (37%), Gaps = 34/287 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F Sbjct: 68 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 126 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119 L+ ++ D+LI L S V ++ + + L QE ++ F R Sbjct: 127 LDTSAAEFDTLIGFLTKMIFWSEVTVQEADLAIITL-LGQEIALPDAVFARRVDWNGPSR 185 Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170 +A + G ++ + + K Y R+ D PH+ Sbjct: 186 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 244 Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226 + L + LTKGCY GQE V+R+ + + +++ P +G+ I Sbjct: 245 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 304 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 +G LG VV G AL + + +D L + V V Sbjct: 305 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 345 >gi|241668459|ref|ZP_04756037.1| hypothetical protein FphipA2_06811 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876992|ref|ZP_05249702.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843013|gb|EET21427.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 248 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G I FLQ ++T+D+ L + +G+I+ + + Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLSDDNNLLMTTFANLKGRIISLCFVKYVSSQKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L ++++ D+L+ L Y + S V + + F+++ F++ + D Sbjct: 66 LLSVEQTVIDNLLSWLKKYGMFSKVSFAVNEDYSLF--------FTDNGFLNHDILVKDA 117 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTKGC 184 L ++ E+I I ++L I I N + P + +D + +S TKGC Sbjct: 118 L--KSEISYEQIQK-INILNKLAI---IDQANVE----KFLPAELDLDNIEKVVSYTKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 Y+GQEV++R+ ++ ++K ++ ++ +D + + Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLK-TSDGKPLANV 212 >gi|297193546|ref|ZP_06910944.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC 25486] gi|197718178|gb|EDY62086.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC 25486] Length = 323 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 104/283 (36%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G+ + +L ++T V L A + IL+ G I + + + Sbjct: 44 VDLSHRGVVTVSGEERLSWLHLLLTQHVTDLSPGQATEALILSAHGHIEHALYLV-DDGE 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ R++LI L K + + + V+ + E Sbjct: 103 TVWAHVEPGTREALIGYLESMKFFYKAEVADRTDDFAVVHLPAGSIAEVPEGVVVRETAH 162 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R +G A I Y LR+ + PH+ + + Sbjct: 163 GRDLFLPRADLESFGAAAGPAVGILAYEALRVESHRPRLGFE-TDHRTIPHELGW-IGSA 220 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LPP G+P+ + ++G Sbjct: 221 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPPGTPVRLASEGAEGRQLGF 280 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 281 VTTSARHYELGPIALALVKRNVPVDAELLAGDTAAAQETVVEP 323 >gi|188997079|ref|YP_001931330.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1] gi|188932146|gb|ACD66776.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1] Length = 302 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%) Query: 1 MSSVYLSNQSFIKVCGKSA-----------IPFLQAIITADVLTLPYKIARGSAILTPQG 49 M+ + L ++ I V GK + FLQ I+T +V L K + +L +G Sbjct: 1 MNWIKLK-RNKILVKGKQSKLNLKGIKEEHTAFLQGILTNNVAQLNDKEFNYNLMLDHKG 59 Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 + F + K E+ +IL+ + RD +++KL KL V E+ + + Sbjct: 60 SPIWDFYVFKDNEN-YILDFEFD-RDEVLNKLKQLKLSYQVFFEVLEFEHIYIFGEDSEK 117 Query: 110 FSNSSF----------------IDERFSIADVLLHRTWGHNEKIAS--------DIKTYH 145 F +F I +G+ E I S D + + Sbjct: 118 FIQQTFKEAPEKFKYLKSGDIYIANNPLRLGQKGFDIFGNLESIKSNLPTDLKIDEEEFE 177 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LRIN+ I + + + + + ISL KGCY+GQE ++R+ R R M Sbjct: 178 NLRINNCIPKIGKELI-EKVLTLETNI-WKYAISLNKGCYVGQEAIARVYFRGKPP-RVM 234 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246 + D++ +L +D +G + V K AI I + Sbjct: 235 VKFSFDNILNENEKVLLNDKPVGFITSVNIKDKTAIGFILR 275 >gi|227506375|ref|ZP_03936424.1| glycine cleavage T protein [Corynebacterium striatum ATCC 6940] gi|227197026|gb|EEI77074.1| glycine cleavage T protein [Corynebacterium striatum ATCC 6940] Length = 352 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 104/286 (36%), Gaps = 32/286 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + IKV G A FL +++ + + G+ L QG +L +S++ ED F Sbjct: 51 SQRRVIKVAGPEAATFLNNLLSQKLDDVSSGFHAGALDLDIQGHVLHQIDLSRV-EDAFY 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----IDERFSI 122 L++ ++ DSL+ L S V +E + V + + +++ + Sbjct: 110 LDVPAAQFDSLLSFLTKMIFWSQVTVEEADLAVVTVLGGELPAPADAVLSREVVWRGPHR 169 Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 D L+ R+ + + R+ + D H+ + Sbjct: 170 TDHLIPRSRLAEAVAELEAAGGTLVGLMAFTAERVRALEPELAADL-DDKAIAHEVPHWI 228 Query: 175 LNG-----ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226 + L KGCY GQE V+R+++ + +++ P G + Sbjct: 229 RRSQGPAFVHLDKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPNRPAIGDEVTLGGRR 288 Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +G LG +V G ALA+ + + G LT+ V Sbjct: 289 VGRLGTIVDDCDYGPIALALIKRSALT-----GGTLTIGDVAASVE 329 >gi|311897747|dbj|BAJ30155.1| hypothetical protein KSE_43720 [Kitasatospora setae KM-6054] Length = 318 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 97/272 (35%), Gaps = 16/272 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ I V G + +L ++T V LP + A + +L+P G + + + + Sbjct: 42 TDLSHRGVITVTGPDRLSWLHLLLTQHVSELPPQQATEALVLSPNGHVEHALYLV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121 T + ++ +L+ L K + V + V+ T ++ + E Sbjct: 101 TSWIHVEPGDAPALVTYLESMKFWNRVEVADATERYAVVFLPAGSTAPVERAAAVRELPW 160 Query: 122 IADVLLHRTWGHNE----KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN- 176 D+ L R A+ I Y LR+ + PH+ D L Sbjct: 161 GRDLFLPRAELAAAVADFGPAAGIWAYEALRVEGHRPRLGFE-TDHRTIPHEV--DWLGS 217 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDD--IEIGTLG 231 + L KGCY GQE V+R+ + +R + + LP G+ + + +G + Sbjct: 218 AVHLQKGCYRGQETVARVHNLGRPPRRLVFLHLDGTAEKLPAHGTEVRVEGQERPVGFVT 277 Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 L + V L GV Sbjct: 278 SAARHHELGPIALALVKRNTPVDAVLLADGVP 309 >gi|227502135|ref|ZP_03932184.1| glycine cleavage T protein [Corynebacterium accolens ATCC 49725] gi|227077119|gb|EEI15082.1| glycine cleavage T protein [Corynebacterium accolens ATCC 49725] Length = 444 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 100/275 (36%), Gaps = 29/275 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ S + ++V G A FL ++T + P + G+ L QG IL + I++ E Sbjct: 137 AIDRSQRRVLRVSGADAPGFLNNLLTQKLDDAPSGFSAGALDLDIQGHILHHMDITRESE 196 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D F L++ ++ +S D L S V +E I V L + + Sbjct: 197 D-FYLDLPAAQFESAQDFLTKMVFWSEVTVEEADIAIVTLLGEADIPTPPTVVFSREVQW 255 Query: 123 ADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPSTIFPHD 169 + EK+ + + R+ + D PH+ Sbjct: 256 PGIKRVDLAVPREKLVESMAALEAEGARLAGLMAFTAERVRAREPELAADL-DKKSIPHE 314 Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220 + + L KGCY GQE V+R+++ + +++ P G I Sbjct: 315 VPQWISRSDADPAHVHLNKGCYRGQETVARVENLGRSPRLLVLLHLDGSAPERPNVGDDI 374 Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 + ++G +G +V G AL + + +D Sbjct: 375 SFNGRKVGRIGTIVDDCDFGPIALGLVKRSALDAG 409 >gi|94676520|ref|YP_588618.1| putative global regulator [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|118577990|sp|Q1LTU6|YGFZ_BAUCH RecName: Full=tRNA-modifying protein ygfZ gi|94219670|gb|ABF13829.1| glycine cleavage T-protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 325 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 31/248 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + I GK A+ +LQ + DV +L + +GK+ Sbjct: 20 LTLISLEEWALITFNGKDAVKYLQDQLACDVTSLKNNEYTFTVHCNTKGKVYSNVYFLHY 79 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLS--- 103 + D F L +S + ++ Y + V I +++ I + + Sbjct: 80 Q-DGFALITRKSVYANELNIFKKYAIFYTVNINFHQNKILLGIAGLQVKDILSNIFTTIP 138 Query: 104 -------WNQEHTFSNSSFIDERFSIADV-----LLHRTWGHNEKIASDIKTYHELRINH 151 + T +RF + L+ + + ++ K + L I Sbjct: 139 NRLCPVIHTMDTTILYLHQPADRFLLITTNNIQNLILKKLTKYKIQTNNSKQWLALDIAA 198 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G + + P ++ L GIS KGCY+GQE ++R ++ N+ +K ++G Sbjct: 199 GYPIIDQ-INSELLLPQALNIEALGGISFNKGCYLGQEAIARTKYHNMNKKELCFLSGKA 257 Query: 212 DLPPSGSP 219 + P+ S Sbjct: 258 NRIPTASE 265 >gi|332992341|gb|AEF02396.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas sp. SN2] Length = 337 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 35/240 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60 ++ L++ IK+ G+ A +L +T ++ L R A +GK + + Sbjct: 15 AIKLNDNMLIKLEGEQADSYLHGQVTVNINALDENTVRYCAHCDNKGKTWSISFVGRHGN 74 Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------H 108 + + ++ + +L Y + S V I + + Sbjct: 75 GRHGNAIFMLTNKDSGAHSLAQLNKYGVFSKVDITDESNQYTQFFLGENLGQMLLSSYFD 134 Query: 109 TFSNSSFI-------------DERFSIADVLLHRTWGHNEKIASDI-------KTYHELR 148 T + +R VL E+ D Y + Sbjct: 135 TLPSEPLTSVHSDVGWVFKSDTQRAGYYVVLNSERAPEFEQKVKDTNGSIFEQNVYDAIM 194 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I I + S P + LNGI KGCY+GQEVV+R + ++ + Sbjct: 195 IESAIP-SIEETGVSEYVPQMMNVQALNGIDFDKGCYMGQEVVARTRFLGKNKRAAYSFS 253 >gi|86159270|ref|YP_466055.1| LigA [Anaeromyxobacter dehalogenans 2CP-C] gi|85775781|gb|ABC82618.1| LigA [Anaeromyxobacter dehalogenans 2CP-C] Length = 304 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 26/258 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++F++V GK A +L + T D+ L A +A L +G +L + E + ++ Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGEAAYAAFLNAKGHLLGEGHVLVREGE-ILV 79 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------FIDER 119 E+D + L + +V E L + + R Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPARLAGRAGAAPVVPSAR 139 Query: 120 FSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 V + G E + + D+ LRI G+ D ++ P + Sbjct: 140 RGAPCVDVWAPAGEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 A + IS TKGCYIGQEVV R R +++ + + P G+P++ E+G Sbjct: 199 AGLTRA-AISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPGAGP-GTPLVAGGQEVGA 256 Query: 230 LGVVV----GKKALAIAR 243 + G+ L R Sbjct: 257 VTSAAETPEGRLGLGYLR 274 >gi|167627906|ref|YP_001678406.1| hypothetical protein Fphi_1680 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597907|gb|ABZ87905.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 248 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G I FLQ ++T+D+ L + +G+I+ + + Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLSDDNNLLMTTFANLKGRIISLCFVKYVSSQKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L ++++ D+L+ L Y + S V + + F+++ F++ + D Sbjct: 66 LLSVEQTVIDNLLSWLKKYGMFSKVSFAVNEDYSLF--------FTDNGFLNHDILVKDA 117 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTKGC 184 L ++ E+I I ++L I I N + P + +D + +S TKGC Sbjct: 118 L--KSEIAYEQIQK-INILNKLVI---IDQANVE----KFLPAELDLDNIEKVVSYTKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230 Y+GQEV++R+ ++ ++K ++ ++ +D + + Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLK-TSDGKPLANV 212 >gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] Length = 362 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 43/300 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G+ + +L ++T V LP + +L G++L + +++ + DT Sbjct: 44 SHRGVLAVPGEDRLSWLHLLLTQHVSELPGDTGTEALVLDINGRVLHHMVVAHVG-DTVW 102 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---FSNSSFIDER---- 119 L+++ L+ L S V VLS T + + Sbjct: 103 LDVEPDDAAELLGYLTKMVFWSKVEPRDATDELAVLSVVGPDTPTVLAAAGVPVPDGVGA 162 Query: 120 FSIADVLLHRTWGHNEKIASDI------------------------KTYHELRINHGIVD 155 ++A R K A+D+ + LR+ Sbjct: 163 LALAGGGFVRRMPWPGKDAADVVVPRAERDAWFARLTAAGARAAGTMAFEALRVEALRPR 222 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDD 212 D PH+ + + + LTKGCY GQE V+R+ + +R +++ G ++ Sbjct: 223 LRVD-TDERTIPHEVGW-IGSAVHLTKGCYRGQETVARVANLGRPPRRLVLLHLDAGDEE 280 Query: 213 LPPSGSPILTDDIEIGTLGVV-----VGKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 LP G P++ +G +G V +G ALA+ R VD + G+ R+ Sbjct: 281 LPRPGDPVVNGGRPVGRVGTVTLHHELGAVALALVKRSVPVDAELVAGVDERAAPARIDP 340 >gi|311087326|gb|ADP67406.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 319 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L S V G + +LQ +T D+ L A G++ + Sbjct: 19 LTMILLEEWSLTYVEGIDSKKYLQGQLTIDINLLLKTHHTLCAHCNFNGRVWSTMHLFHY 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI--- 116 E+ ++ +S I ++ Y + S + I E+ I + + +F +S F+ Sbjct: 79 EKGYAYIQ-RKSVSQIQIKEICKYSIFSKIKIRELNSICLIGFAGCNVRSFLSSLFVKIP 137 Query: 117 --------------------DERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ERF D L + + ++ K + L I G Sbjct: 138 NQSCPVIHEDNKTILWYEKPSERFLLVLPFLDFLTLKRKINQNIFLNNSKQWLLLDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P + L IS KGCY GQE ++RI + + + T Sbjct: 198 LPVIDK-ICSNKFTPQAINLHNLKAISFKKGCYYGQETIARIFFKKTNKYFLCFLVSTGS 256 Query: 213 L-PPSG----SPILTDDIEIGTLGVVV 234 + P G + + ++ ++G L +V Sbjct: 257 IFPKIGSFIETKVDSEWFKVGVLLSIV 283 >gi|15617034|ref|NP_240247.1| hypothetical protein BU435 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681786|ref|YP_002468172.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682341|ref|YP_002468725.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471488|ref|ZP_05635487.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387298|sp|P57510|YGFZ_BUCAI RecName: Full=tRNA-modifying protein ygfZ gi|25403621|pir||E84980 hypothetical protein [imported] - Buchnera sp. (strain APS) gi|10039099|dbj|BAB13133.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622074|gb|ACL30230.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624629|gb|ACL30784.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086166|gb|ADP66248.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086738|gb|ADP66819.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087833|gb|ADP67912.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 319 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 35/267 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L S V G + +LQ +T D+ L A G++ + Sbjct: 19 LTMILLEEWSLTYVEGIDSKKYLQGQLTIDINLLLKTHHTLCAHCNFNGRVWSTMHLFHY 78 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI--- 116 E+ ++ +S I ++ Y + S + I E+ I + + +F +S F+ Sbjct: 79 EKGYAYIQ-RKSVSQIQIKEICKYSIFSKIKIRELNSICLIGFAGCNVRSFLSSLFVKIP 137 Query: 117 --------------------DERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 ERF D L + + ++ K + L I G Sbjct: 138 NQSCPVIHEDNKTILWYEKPSERFLLVLPFLDFLTLKRKINQNIFLNNSKQWLLLDIEAG 197 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + + P + L IS KGCY GQE ++RI + + + T Sbjct: 198 LPVIDK-ICSNKFTPQAINLHNLKAISFKKGCYYGQETIARIFFKKTNKYFLCFLVSTGS 256 Query: 213 L-PPSG----SPILTDDIEIGTLGVVV 234 + P G + + ++ ++G L +V Sbjct: 257 IFPKIGSFIETKVDSEWFKVGVLLSIV 283 >gi|256087633|ref|XP_002579970.1| hypothetical protein [Schistosoma mansoni] gi|238665470|emb|CAZ36209.1| expressed protein [Schistosoma mansoni] Length = 347 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 42/201 (20%) Query: 47 PQGKILLYFLISKIE-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------ 95 P+G++L I + +++E+D S +L+ L Y LR V I+ Sbjct: 18 PRGRVLTDAFIYHTNRLSANQSDYLVEVDVSCVPNLVKHLKQYNLRGKVKIDADLSVYPW 77 Query: 96 -------------------PINGVVLSWNQEHTFSNSSFIDER---------FSIADVLL 127 P+N + +S ++ F S D R S ++ + Sbjct: 78 VAMPTSRHSNQLNNYEAWSPVNSLDISDQKQLIFFAS---DPRGISGWSGRILSTSNTNV 134 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 + DI YH R G+ + +F+ S P +A DL G+S +KGCYIG Sbjct: 135 TSIFPSCNTKPLDINLYHNARWELGLPEGIKEFITSDTLPFEANADLSGGVSFSKGCYIG 194 Query: 188 QEVVSRIQHRNIIRKRPMIIT 208 QE+ +R +IR+R + I Sbjct: 195 QELTARTHFTGVIRRRYVPIK 215 >gi|225874893|ref|YP_002756352.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196] gi|225791236|gb|ACO31326.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196] Length = 371 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 111/298 (37%), Gaps = 50/298 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+++S + + G +L +IT + LP + S +L QG+IL + D Sbjct: 47 LAHRSLLSIRGGDQQRWLNGMITNTIKDLPAGHSNYSYVLNAQGRILGDLTACRFP-DHI 105 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSS---------- 114 +L D ++ L + + + +V +E +Q + L+ + + Sbjct: 106 LLVTDETQVAGLAEHFDHFIIMDDVELEKVQGRAAIGLAGPEAALLLERAGLPLPEGPLT 165 Query: 115 FID-ERFSIADVLLHRTWGH-----------------------NEKIASDIKTYHELRIN 150 F+D VL+ + +G + + LR+ Sbjct: 166 FVDAPDLGSQPVLILQEYGPVVPRFTLWMAEADAPAFWDRLAVAGMMPAGADALEMLRLL 225 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ DF P + D + KGCY+GQE+V RI+ R + ++ ++ T Sbjct: 226 EGVPQYGVDF-SEKYLPQEV--DGSRPLHFNKGCYLGQEIVERIRSRATVHRQLRVVELT 282 Query: 211 DDLPPSGSPILTDD-IEIGTLGVVV---GK---KALAIARIDKVDHAIKKGMALTVHG 261 LP +P+ + IG + G LA+ R + A+++ LT G Sbjct: 283 GTLPALPAPVEVGEAQAIGEITSAAALPGGPRLLGLAMLR----NEAMERQQTLTYEG 336 >gi|320163245|gb|EFW40144.1| hypothetical protein CAOG_00669 [Capsaspora owczarzaki ATCC 30864] Length = 388 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 70/273 (25%) Query: 4 VYLSN--------QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55 V LS+ + +++ G A +Q + D+ + +A+L G++L Sbjct: 113 VPLSHTSAAAAGRRRILRISGPEAADVVQNLTANDIT-ITPHPVVFTAMLNHLGRVLADA 171 Query: 56 LISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--- 102 + E F+L++D+ LI+ L + ++V ++ ++ Sbjct: 172 FVFTFPPATKANSITSETEFLLDVDQETSVQLIEALQPFVRLADVDLDTNVAEWQLVQVF 231 Query: 103 ---SWNQEHTFSNSSFI--------------------DERFSIAD-------------VL 126 +W+ T + D R + Sbjct: 232 TPPAWSASQTIDWLHQVQNTTSSDASAKARAHVLGGWDPRLVRPQNYLDTQIDQVGSSMG 291 Query: 127 LHRTWGHNEKIASDIKTY------------HELRINHGIVDPNTDFLPSTIFPHDALMDL 174 L + + +D + + R G+ + + F +T FP ++ + Sbjct: 292 LRLLLSASHPLVADSARWATLGRLGSLGEYDDRRYALGLAEGVSGFRFATSFPLESNFER 351 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 LNG+ KGCY+GQE+ R R + RKR + Sbjct: 352 LNGVHFNKGCYLGQELTHRSHSRGVTRKRILPF 384 >gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] Length = 369 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + +N+ + V G+ + +L + + + L + + L+P G + + +++ + Sbjct: 54 ALIDHTNRDVLAVTGEDRLTWLHTLSSQHLTDLADGASTEALFLSPNGHVEHHAVLTH-Q 112 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------- 110 + L+ + +L+ L + S V + + + L+ Sbjct: 113 DGVVYLDTEPGAGAALLAFLDGMRFWSKVEVAPADLAVLALAGPTAADVAGRARNAEPGR 172 Query: 111 --SNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDF 160 + F D++L R + + LRI D Sbjct: 173 SGPDGGFTRRSAEGLDLVLPRAAVGAVAQELRAAGAVPAGSWAADALRIPTRRPRWGVD- 231 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSG 217 P++ L + L KGCY GQE V+R+ + +R +++ LP G Sbjct: 232 TDEKTIPNEVSW-LSTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLNLDGSVGTLPEPG 290 Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 P+ + +G LG + L + + +++ G L V G+ Sbjct: 291 EPVTSGAGRAVGRLGTIAQHHELGPIALALIKRSVEAGTPLLVGGI 336 >gi|220918129|ref|YP_002493433.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1] gi|219955983|gb|ACL66367.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1] Length = 304 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 26/258 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++F++V GK A +L + T D+ L + +A L +G +L + E + ++ Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGE-VLV 79 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-----SNSSFIDE--- 118 E+D + L + +V E + + E + S+ + Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPAKLGGRAGSAPVVPTAR 139 Query: 119 ---------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 + L + D+ LRI G+ D ++ P + Sbjct: 140 RGAPCMDVWAPAAEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 A + IS TKGCYIGQEVV R R +++ + + P G+P++ E+G Sbjct: 199 AGLTRA-AISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPGARP-GTPLVAGGQEVGA 256 Query: 230 LGVVV----GKKALAIAR 243 + V G+ L R Sbjct: 257 VTSVAETPEGRLGLGYLR 274 >gi|317126054|ref|YP_004100166.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043] gi|315590142|gb|ADU49439.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043] Length = 357 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 42/298 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V LS++S + V G + +L ++ T +L L + +R + ILTP+G + + Sbjct: 60 LAVVDLSHRSVLTVTGPDRLSWLHSLTTQHLLGLGVRQSREALILTPKGHVEHSLHLV-D 118 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + T + + +SL L + V + + VL + + R Sbjct: 119 DGATTWITTEPGAGESLRAWLDRMRFMLRVEVADVTADWAVLGEPHSAESAEGEPLAWRD 178 Query: 121 SIADVLLHRTW--------------------------GHNEKIASDIKTYHELRINHGIV 154 D++ T ++ + + LRI Sbjct: 179 PWPDLVGDTTAYGPVEGHPGRQWSWREVIVPRASLEEAVADRPLAGLWAADALRIAAWRP 238 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212 + H+ L + L KGCY GQE V+R+ + +R + + Sbjct: 239 QLGAE-TDHRTIVHEVDW-LRTAVHLHKGCYRGQETVARVHNLGRPPRRIVFLHVDGSGH 296 Query: 213 -LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 LP G+ + D +G L V G ALA+ + L V V Sbjct: 297 VLPAPGAEVRAGDRVVGHLTSVGRHHTDGPIALAVIK-----RNTDPEAVLLVGDVTA 349 >gi|197123340|ref|YP_002135291.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K] gi|196173189|gb|ACG74162.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K] Length = 304 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 94/258 (36%), Gaps = 26/258 (10%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++F++V GK A +L + T D+ L + +A L +G +L + E + ++ Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGE-ILV 79 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA- 123 E+D + L + +V E VL + + A Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPDGPARLGGRAGSAPVVPTAR 139 Query: 124 --------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 L + D+ LRI G+ D ++ P + Sbjct: 140 RGAPCVDVWAPAAEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198 Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 A + IS +KGCYIGQEVV R R +++ + + P G+P++ E+G Sbjct: 199 AGLTRA-AISFSKGCYIGQEVVLRATARGHLQRGLVQLELPPGAGP-GTPLVAGGQEVGA 256 Query: 230 LGVVV----GKKALAIAR 243 + V G+ L R Sbjct: 257 VTSVAETPEGRLGLGYLR 274 >gi|126642848|ref|YP_001085832.1| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978] Length = 217 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 26/217 (11%) Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86 +T D L R +AI +G+I + K ++F + + + + + + Y Sbjct: 1 MTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAEEFAKHIKKYGA 60 Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 S + + Q V HT +S+ +DI + + Sbjct: 61 FSKMTLSEQG--AVFPKVVNGHTEFSST-----------------------ETDISEWQK 95 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 I G P + + G++ KGCY+GQE+V+R+ + + + Sbjct: 96 QAIVTGQA-WIAQATEHEFQPQELRLHQREGVNYDKGCYLGQEIVARLWFKAKPKHWLHL 154 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 + GT D P + + D + + G AL +A+ Sbjct: 155 VQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALVVAK 191 >gi|317509404|ref|ZP_07967023.1| aminomethyltransferase folate-binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252327|gb|EFV11778.1| aminomethyltransferase folate-binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 323 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 96/277 (34%), Gaps = 17/277 (6%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 ++V SN I++ G + +L I+T V LP + IL GK+ + + + Sbjct: 20 AAVDRSNLDVIRLTGPERLDWLNKIVTQKVDELPAASQTQALILDAHGKVEHHMRVFETG 79 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 EDT L + K L+D L + V+ E P V+ ++ Q F + E F Sbjct: 80 EDTTWLVTEPGKGAPLLDYLRKMVFWAKVVPEAAPDRKVIATFEQGKRF-EAVHPSESFE 138 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL--------MD 173 L T G LR+ D PH+ + Sbjct: 139 EVWATLTSTRGFRP---VGTWADEALRVAALEPRLGLD-TDERTLPHEVGWVNPRGAELA 194 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTD-DIEIGT 229 + L KGCY GQE VS+I + + ++ + G I + +G Sbjct: 195 EWKAVHLNKGCYRGQETVSKIANVGRPPRSLALLHFDGEDAQDLRPGESIADEQGSVVGR 254 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 LG V L + V + L V G + Sbjct: 255 LGTAVTHYELGSVALALVKRGLNPDRPLLVAGRAAQL 291 >gi|296268469|ref|YP_003651101.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833] gi|296091256|gb|ADG87208.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833] Length = 352 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 101/293 (34%), Gaps = 32/293 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ ++V G + +L ++ + + TL + + IL P G+I + + + Sbjct: 45 SNRGVVRVSGPDRLSWLNSLSSQKLDTLRPGVPTQTLILDPHGRIEHHLTLV-DDGTAVW 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 ++ LI L + V IE + V+S T + E Sbjct: 104 AHVEPGTAADLIAFLEKMRFMLRVEIEDRTAEYAVVSVGAPGTEPAPRTLPEGIIAIGGD 163 Query: 127 L----HRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 L R G +++ + + Y LRI I + PH+ + + Sbjct: 164 LLVPRDRLAGIADELGLRLAGLWAYEALRIAAHIPRLGFE-TDHKTIPHEVGW-IEKAVH 221 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL--------------- 221 L KGCY GQE V+R+ + +R + + LPP G+P+ Sbjct: 222 LNKGCYRGQETVARVHNLGHPPRRLVFLHLDGSVDILPPHGAPVTLAGPAAAAGEPGAEP 281 Query: 222 --TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV--KASFPH 270 D ++G +G L + V + L GV + P Sbjct: 282 DAGDRGQVGFVGSSARHYELGPIALALVKRTVPVDAPLLAGGVAASQEVIVPP 334 >gi|116671554|ref|YP_832487.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter sp. FB24] gi|116611663|gb|ABK04387.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter sp. FB24] Length = 361 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 102/275 (37%), Gaps = 38/275 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L + + V L + +L+ QG+I + Sbjct: 44 VDLSHRGVVTVSGPDRLNWLNTLSSQQVTNLAPGESSELLLLSVQGRIEFDARVIDDGGT 103 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 T+++ ++ ++ L + L K V I ++ V+ S + +S ++ + Sbjct: 104 TWLI-VEAAEAAPLAEWLNRMKFMLRVEIADVSDDWAVLGSTRRVEEWSGLKVWEDPWPH 162 Query: 123 ADVLLH--------------RTWGH------------NEKIASDIKTYHELRINHGIVDP 156 + R W ++ + + LRI Sbjct: 163 VGAGGYAYSVVAEESHPGMERPWFEYLVPAAELEATVGDRPLAGVWAAEALRIAAWRPRL 222 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213 + PH+ + L + L KGCY GQE V+R+ + +R + + L Sbjct: 223 GAE-TDDKTIPHELDL-LRTAVHLAKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTL 280 Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 P GS + + ++GT+ VV G ALA+ + Sbjct: 281 PAVGSEVRLGERKVGTVTSVVQHYEMGPIALAVIK 315 >gi|326563032|gb|EGE13306.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 103P14B1] gi|326577301|gb|EGE27189.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 101P30B1] Length = 233 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 28/242 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + ++ G + FLQ ITA++ + +AI +G++ I++ F Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + D+ I + Y S + + +N + D Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 ++ N+ +D + + +L I G T P + + G++ KGCY Sbjct: 95 VIDDIPTFNKTQQTDTELWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+++R+ + + I G +PP+G + + + G +AL IAR + Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPPTGGD-MGRMSVVNAIATDTGFEALVIARPE 212 Query: 246 KV 247 + Sbjct: 213 DL 214 >gi|306836828|ref|ZP_07469786.1| folate-binding protein YgfZ [Corynebacterium accolens ATCC 49726] gi|304567289|gb|EFM42896.1| folate-binding protein YgfZ [Corynebacterium accolens ATCC 49726] Length = 444 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 100/275 (36%), Gaps = 29/275 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ S + ++V G A FL ++T + P + G+ L QG IL + I++ E Sbjct: 137 AIDRSQRRALRVSGADAPGFLNNLLTQKLDDAPSGFSAGALDLDIQGHILHHMDITRESE 196 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D F L++ ++ +S D L S V +E I V L + + Sbjct: 197 D-FYLDLPAAQFESAQDFLTKMVFWSEVTVEEADIAIVTLLGEADIPTPPTVVFSREVQW 255 Query: 123 ADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPSTIFPHD 169 + E++ + + R+ + D PH+ Sbjct: 256 PGIKRVDLGFPREQLVESMAALEAEGARLAGLMAFTAERVRAREPELAADL-DKKSIPHE 314 Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220 + + L KGCY GQE V+R+++ + +++ P G I Sbjct: 315 VPQWISRSDADPAHVHLNKGCYRGQETVARVENLGRSPRLLVLLHLDGSAPERPNVGDDI 374 Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250 + ++G +G +V G AL + + +D Sbjct: 375 SFNGRKVGRIGTIVDDCDFGPIALGLVKRSALDAG 409 >gi|294630097|ref|ZP_06708657.1| glycine cleavage T protein [Streptomyces sp. e14] gi|292833430|gb|EFF91779.1| glycine cleavage T protein [Streptomyces sp. e14] Length = 321 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G+ + +L ++T V LP A + IL+ G I + + + Sbjct: 42 VDLSHRGVVTVSGEDRLGWLHLLLTQHVSELPAGQATEALILSAHGHIEHALYLV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ +++LI L K V + + + V+ + + E Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTADTAVVHLPAGSIAEVPDGVVVRETAH 160 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R T+ + I + LR+ + PH+ + Sbjct: 161 GRDLFLPREDLETYAEKTGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGAA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP G+ I D ++G Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSDVHLPPHGTEIRLADEGPDGRKVGV 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + G V+ Sbjct: 279 ITTSVRHYELGPVALAVIKRNVPVDARLTAGDTAAAQETVVEP 321 >gi|67922627|ref|ZP_00516133.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera watsonii WH 8501] gi|67855555|gb|EAM50808.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera watsonii WH 8501] Length = 353 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 109/300 (36%), Gaps = 49/300 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + FL T ++ +L + + G+ L + + + ED+ Sbjct: 46 SHWGLLQLTGSDRLRFLHNQTTNNINSLQPGQLSDTVFVNSTGRTL-DLVTAYVTEDSIF 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVII-EIQPINGVVLSWNQEHT--------------- 109 L + +++ L + + Y V I +I N + E T Sbjct: 105 LLVSPNRQQFLYEWMDRYIFPMDKVGIKDISDKNAIFTIIGSEATTKLNQGDIANNAITE 164 Query: 110 --FSNSSFI---DERFSIADVLLHRTWG----HNEKIASDIKT--------------YHE 146 +N F+ DE+ I + + G E A + + + Sbjct: 165 LSPNNHKFVTINDEKVLIGEGTGLKLPGYTLIFPENQAKTVWETLTNLGIIPVGDRVWEQ 224 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + P + + + IS KGCYIGQE ++R+ +++R Sbjct: 225 LRIKQGRPYPDQELT-ENYNPLETGL--WSTISFDKGCYIGQETIARLNTYQGVKQRLWG 281 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262 + ++ +G+ + DD ++G L + LA R +K + + + Sbjct: 282 VKLNQEV-KAGNTVTLDDKKVGILTSSIQIEDEYIGLAYVRTKAGGEGLKVTIGEAIGEL 340 >gi|320582648|gb|EFW96865.1| Mitochondrial matrix protein [Pichia angusta DL-1] Length = 458 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 98/329 (29%), Gaps = 110/329 (33%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-----------------DVLTLPYKI------------ 38 N+ +++ G + FL ++T D+ L Sbjct: 22 NRKLLEIKGPDSAKFLNGLLTTKMLPTFEKKNLTTISASDLQALENSKMLGLTDEQMQTE 81 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKI-----EEDTFILEI 69 R S +L +G++L + ++LE+ Sbjct: 82 NWGILHEDETYDPDVPERLGIRRDGRYSMLLNSKGRVLSDLFVYPTPYTPNNGPKYLLEM 141 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------------- 98 + L +KLR+ + I + N Sbjct: 142 APKNFGQIQMMLKLHKLRAKIDISVANYNSWFYYDHSEEFDEFYDLLQSEYLNNRNSKSV 201 Query: 99 GVVLSWNQ--------EHTFSNSSF-------IDERFSIADVLLHRTWGHNEKIASDI-- 141 +W++ E + + ID+R + + DI Sbjct: 202 EAASTWSKYLQDRLVNEEILTEADASQLQGFAIDDRAPCFGLKFVLPPESQLQNLEDIKV 261 Query: 142 --KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + Y LR GI + + S P + +D +NGI+ KGCY+GQE+ R H + Sbjct: 262 GHEVYDTLRTLVGISEISD--FKSETLPFENNLDYMNGINYNKGCYVGQELTIRTFHSGV 319 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIG 228 IRKR M I P + D ++G Sbjct: 320 IRKRVMPIQLFRVGEPVSEELKLADEDLG 348 >gi|218438958|ref|YP_002377287.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424] gi|218171686|gb|ACK70419.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424] Length = 354 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 99/299 (33%), Gaps = 55/299 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ FL T ++ +L + + G+ L + ++ Sbjct: 47 SHWGLLQLKGEDRSRFLHNQTTNNINSLKSGQGCDTVFINSTGRTL-DLATVYVTDEAIE 105 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEH----------------- 108 + + ++R L+ + Y V + + + H Sbjct: 106 VLVSPNRRSFLMTWMDRYIFPMDKVELTDISEQNAIFTLLGPHSDRILEKLNLKSIIGQP 165 Query: 109 ----------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 T +FI R + + + + + E + Sbjct: 166 VGSHLTGEVANCLVRVGVGTGLTLPGYTFIIPR--EKALPVWQEFVNTEVTLLGENVWEH 223 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + P ++ + IS KGCYIGQE ++R+ +++R Sbjct: 224 LRILQGRPVPDRELT-EEYNPLESGL--WKTISFDKGCYIGQETIARLNTYKGVKQRLWG 280 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 + + + I ++ +IG L G LA + A +G+ +TV G Sbjct: 281 VKLDHPV-EPDTEIFLEETKIGVLTSCTETQTGGFGLAYVKT----KAGGEGLRVTVKG 334 >gi|326561940|gb|EGE12275.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 7169] gi|326570316|gb|EGE20360.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC1] gi|326573625|gb|EGE23584.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis CO72] Length = 233 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 28/242 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + ++ G + FLQ ITA++ + +AI +G++ I++ F Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + D+ I + Y S + + +N + D Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 ++ N+ +D K + +L I G T P + + G++ KGCY Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+++R+ + + I G +PP+G + + L G +AL IAR + Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPPTGGN-MGRMSIVNALATDTGFEALVIARPE 212 Query: 246 KV 247 + Sbjct: 213 DL 214 >gi|254417054|ref|ZP_05030801.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus chthonoplastes PCC 7420] gi|196176221|gb|EDX71238.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus chthonoplastes PCC 7420] Length = 353 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 105/303 (34%), Gaps = 47/303 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS+ +K+ + + FL T D L + +T + + + + + Sbjct: 42 ALVDLSHWGLLKISDEDRLRFLHNQSTNDFQKLKPGQGCDTVFVTSTARTI-DLVTAYVT 100 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 ++ +L + ++R L++ L Y V + + + S + + + + + Sbjct: 101 KEAVLLLVSPNRRQQLLEWLDRYIFPMDRVELADISNDSAIFSLIGPESDTLLTKLGVQL 160 Query: 121 SIADV-----------------------LLHRTWGHNEKIASDIKT-------------- 143 I DV L T A+++ Sbjct: 161 PIGDVYASHQHLNLNDIEVRIARGSGFALPGYTLIVPASNAANLWQTLTTANATPMGDRV 220 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P+ + P +A + N IS KGCYIGQE ++R+ ++++ Sbjct: 221 WQQLRIEQGRPLPDYELT-EDYNPLEAGL--WNTISFDKGCYIGQETIARLNTYKGVKQQ 277 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTV 259 + + G+ I D ++G L G LA R ++ + Sbjct: 278 LWGVRLPVSV-EPGTVITVDGEKVGKLTSCTPTEQGYIGLAYIRTKAGGVGLQVQVGEIE 336 Query: 260 HGV 262 V Sbjct: 337 GDV 339 >gi|224044546|ref|XP_002192842.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 212 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 22/173 (12%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLI 57 ++ + ++ + V G A FLQ ++T DV L A + L QG+ L ++ Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRLLAEGDAPRALYAHALNAQGRCLYDVIL 82 Query: 58 SKI-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 ++ EE +LE D S DS+ L YK+R V I P + + + Sbjct: 83 YRLHRSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLP 142 Query: 113 SSF-------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHG 152 D R + L G N D++ YH R G Sbjct: 143 KCADQALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQG 195 >gi|88855763|ref|ZP_01130426.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1] gi|88815087|gb|EAR24946.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1] Length = 343 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 109/305 (35%), Gaps = 41/305 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S V L++++ + + G + +L ++ T + L + + +L P G+I + + Sbjct: 23 SVVELADRAVLTITGPDRLTWLDSLTTQALTGLGAGDSAETLLLNPNGRIEHAMRVV-DD 81 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------ 103 +T L ID S R++L L + V I + + V + Sbjct: 82 SETLWLLIDGSAREALAKWLDRMRFTLRVEIADRSDDFVTIGSFGDLGLPVAVSHEIPLV 141 Query: 104 WNQEHTF-SNSSFIDERFSIADVLLHRTWGHNEKIASDIK--------TYHELRINHGIV 154 WN + R + SD+ + LRI Sbjct: 142 WNDSWAAVARGGHQYSRAEQHPGATWNYRESLVAVDSDLSDFAASGSLAFEALRIAAWRP 201 Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GT 210 +T+ + PH+ +D + + L+KGCY GQE V+++ + +R +++ Sbjct: 202 WFSTE-VDDRSIPHE--LDWMRSAVHLSKGCYRGQETVAKVHNLGHPPRRLVLLHLDGSE 258 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRV 264 LP +G+ + + +GT+ G ALA+ R + + Sbjct: 259 GALPEAGAEVSLGEKVVGTVTATARHFELGPIALAMIKRGVDAAETLAVASDVGAIAAAQ 318 Query: 265 KASFP 269 + P Sbjct: 319 EVIVP 323 >gi|218244955|ref|YP_002370326.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801] gi|257057980|ref|YP_003135868.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802] gi|218165433|gb|ACK64170.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801] gi|256588146|gb|ACU99032.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 95/290 (32%), Gaps = 49/290 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ +++ G+ + FL T ++ L + + G+ L + + ++ + Sbjct: 46 THWGLLQLTGEDRLRFLHNQTTNNINALKPGQGCYTVFVNSTGRTL-DLATAYVTDEAIL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109 L + ++R L++ + Y V I + + T Sbjct: 105 LLVSPNRRQFLLEWMDRYIFPMDKVQISDISQQNAIFTLMGSETNKLLTQGGMNISNLVE 164 Query: 110 ------------------FSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHE 146 + S +++ ++ + + + Sbjct: 165 LPPENHTLVTIKNEFITVANGSGLAIPGYTLIVPINQAKIVWEELIKLGITPIGDRVWEQ 224 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + +A + IS KGCYIGQE ++R+ +++R Sbjct: 225 LRIKQGRPFPDKELT-EDYIALEAGL--WQAISFDKGCYIGQETIARLNTYKGVKQRLWG 281 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK 252 + T L G+P++ D +IG L + LA + + Sbjct: 282 VKLT-QLVDPGTPVILDGNKIGILTSCIEIEQEFWGLAYVKTKAGGAGLT 330 >gi|187931894|ref|YP_001891879.1| hypothetical protein FTM_1232 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712803|gb|ACD31100.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 248 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 24/210 (11%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFI 66 N ++V G FLQ + TAD+ L +A +G+I+ + I + + Sbjct: 7 NFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKLL 66 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L +++ ++L+ L Y + S V + F+ + F++ L Sbjct: 67 LSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGSL 118 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183 + T+ ++R + I + P + +D + + TKG Sbjct: 119 ------------TSEMTFEQVRKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 CY+GQEV++R+ ++ ++K ++ D+ Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|172041293|ref|YP_001801007.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM 7109] gi|171852597|emb|CAQ05573.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM 7109] Length = 391 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 101/322 (31%), Gaps = 61/322 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ + V G+ A +L +I+ + + A IL QG + F ++ + ED +L Sbjct: 52 DRVALWVHGEEAKTWLNDLISQKINAIQPGQATFGLILDVQGHVEYQFGVAAL-EDGILL 110 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-----SWNQEHTFSNSSFIDERFSI 122 ++ + + L L + V +E + + + + + Sbjct: 111 DVAAEQAEGLETYLSRMIFWAKVEVERLDLVQMAVLKKAGAQESAEDDRAGLGATPDGAF 170 Query: 123 ADVLLHRTWGHNEKIASDIK-------------------------TYHELRINHGIVDPN 157 D RT E +D+ Y RI Sbjct: 171 PDAHSWRTRKLGEIAVTDVWLPADAQIGSWDHATAELGYAPTGLMAYTAWRIAARQPVIG 230 Query: 158 TDFLPSTIFPHDALMDL------------------LNGISLTKGCYIGQEVVSRIQHRNI 199 D PH+ L + + L KGCY GQE VSR+Q+ Sbjct: 231 ED-TDEKTIPHEVPWYLGENNHGATQLAQESEGPTAHAVHLNKGCYRGQETVSRVQNLGK 289 Query: 200 IRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR---IDKVD 248 + +++ LP G+ + IG +G V G ALA+ R ++K+ Sbjct: 290 PPRTLVLLHLDGSRNALPEVGTDLTAGGRRIGRVGSSVHDAILGPIALALVRRNVVEKLA 349 Query: 249 HAIKKGMALTVHGVRVKASFPH 270 AL V Sbjct: 350 TDPATVPALQAGEVDAAIDPAD 371 >gi|297200637|ref|ZP_06918034.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083] gi|197709768|gb|EDY53802.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083] Length = 321 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 97/275 (35%), Gaps = 17/275 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + Sbjct: 42 VDLSHRGVVSVTGDDRLSWLHLLLTQHVSDLPTGQATEALILSAHGHIEHALYLV-DDGT 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ +D+LI L K V + + V+ + E Sbjct: 101 TVWAHVEPGTQDALIAYLESMKFFYRVDVADRTGEFAVVHLPAGSIAEVPEGVVVRETPY 160 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A + Y LR+ H + PH+ + Sbjct: 161 GRDLFLPRADLESYAEKSGPAVGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGTA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP+G+ I D +IG Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGADIRLADEGPDGRKIGF 278 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + V L + V I L Sbjct: 279 VTTSVRHHELGPVALALVKRNIPLDARLMADSTAA 313 >gi|328883978|emb|CCA57217.1| Folate-dependent protein for Fe or S cluster synthesis or repair in oxidative stress [Streptomyces venezuelae ATCC 10712] Length = 321 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T + L A + IL+ G I + + Sbjct: 42 VDLSHRGVVAVTGDDRLSWLHLLVTQHMTDLAPGQATEALILSANGHIEHALYLV-DDGA 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ R+ L+ L K V + + + V+ + + E Sbjct: 101 TVWAHVEPGTREELVAYLESMKFFYRVEVADRTDDFAVVHLPAGSIAEVPEGAVVRETPH 160 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + + A+ + Y LR+ + PH+ + + + Sbjct: 161 GRDLFLPRADLESFAGSHGPAAGVLAYEALRVEAHRPRLGFE-TDHRTIPHEVGL-IGSA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LP G+PI + ++G Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVLLPGHGTPIRLAADGEEGRQLGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + G V+ Sbjct: 279 VTSSVRHHELGPIALALVKRNVPVDAPLVAGTTAAAQETVVEP 321 >gi|302552399|ref|ZP_07304741.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM 40736] gi|302470017|gb|EFL33110.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM 40736] Length = 321 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + + Sbjct: 42 VDLSHRGVVAVTGDDRLAWLHLLLTQHVSELPVGRATEALILSANGHIEHALYLV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ +++LI L K V + + + V+ + + E Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYKVEVADRTADTAVVHLPAGSIADVPEGAVVRETPY 160 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + + I + LR+ + PH+ + + Sbjct: 161 GRDLFLPRADLEAFAEQAGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGSA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LP +G+ + D +IG Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPTAGTEVRLADDGPDGRKIGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V V+ Sbjct: 279 ITTSARHHELGPVALALVKRNVAVDAPLVAGDTAAAQEVVVEP 321 >gi|119485425|ref|ZP_01619753.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp. PCC 8106] gi|119457181|gb|EAW38307.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp. PCC 8106] Length = 349 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 107/302 (35%), Gaps = 48/302 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ + FL T ++ +L S ++ + + + ED + Sbjct: 46 SHWGLLQISDDDRLRFLHNQSTNNIQSLQPGQGCDSVFVSSTARTI-DLTTFYVTEDAVL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLS--WNQEHTFSNSSFIDE----- 118 + + ++R LID L Y V ++ + S Q H I Sbjct: 105 ILVSPNRRQMLIDWLDRYIFPMDRVELKDISDQNAIFSLIGPQSHQLLERLGITPLSDQP 164 Query: 119 --------------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148 R ++ L + +T + IA +T+ +LR Sbjct: 165 YATHQQVEIENIPVRVAVGSGLTTTGYTLIVSVDHAVSIWKTLIASGAIAMGNRTWEQLR 224 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G P+++ P +A + IS KGCYIGQE ++R+ ++++ + Sbjct: 225 IEQGRPVPDSELT-DDYNPLEAGL--WKTISFEKGCYIGQETIARLNTYKGVKQQLWGLK 281 Query: 209 GTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P G+ I +D ++G L G L R +K + TV G + Sbjct: 282 LEAAVP-VGTEIKVEDKKVGKLTSFIETKAGFLGLGYIRTKAGGKGLKVKVG-TVEGEVI 339 Query: 265 KA 266 + Sbjct: 340 EV 341 >gi|171915199|ref|ZP_02930669.1| glycine cleavage T protein, aminomethyl transferase [Verrucomicrobium spinosum DSM 4136] Length = 314 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 105/283 (37%), Gaps = 30/283 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60 V LS +S + G + +L +T +V + + + +G++ I Sbjct: 15 YVNLSARSKWLLRGADRVRYLNGQVTNNVRAATETRSVYACVTNLKGRVEGDIFIHASAI 74 Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHT------FSN 112 ++ +++ + R+ L +L Y + +V +++ + ++ +E T Sbjct: 75 GDDPVLVVDAEPGLREPLSLRLERYIIADDVELLDVTEEWQLWHAFGEEATQYHEMALPE 134 Query: 113 SSFIDE--RFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIVDPNTDFLPS 163 S+ RF + V L + ++ + RI G+ + P Sbjct: 135 SAHRAAAWRFGLEGVDLWWPVAAGDPPLAEGMRPPLTSEELETWRICAGVPRWPNELNPE 194 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPI 220 FP +A + G+ KGCYIGQE++SRI+ + + + + G D P+G+ + Sbjct: 195 -AFPPEAGLQE-RGMDYAKGCYIGQEILSRIKTTGKMPQSLVRLQGNGDAAALFPAGALL 252 Query: 221 LTDDI-----EIGTLGVVVGKKALAI-ARIDKVDHAIKKGMAL 257 ++G + + + V A +L Sbjct: 253 FHQKEDGILTKVGHVTSATLHPGHGLPVGLGYVKQAFASAHSL 295 >gi|194220206|ref|XP_001918326.1| PREDICTED: similar to CG8043 CG8043-PA [Equus caballus] Length = 203 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 6/122 (4%) Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 D P P ++ + +NG+S TKGCY+GQE+ +R H +IRKR + + LP Sbjct: 78 GVHDLPPGVALPLESNLAFMNGVSFTKGCYVGQELTARTHHMGVIRKRLFPVQFSGPLPA 137 Query: 216 SG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 SG S + G G LA+ +++K+ + A V + AS P Sbjct: 138 SGIAPGTSVLTESGQAAGKYRAGQGDVGLALLQLEKIRGPLHIRTA-ESGRVALTASVPD 196 Query: 271 WY 272 W+ Sbjct: 197 WW 198 >gi|296112437|ref|YP_003626375.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis RH4] gi|295920131|gb|ADG60482.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis RH4] gi|326567016|gb|EGE17139.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 12P80B1] gi|326569580|gb|EGE19634.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC8] gi|326572353|gb|EGE22346.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis BC7] gi|326577879|gb|EGE27744.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis O35E] Length = 233 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 28/242 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + ++ G + FLQ ITA++ + +AI +G++ I++ F Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + D+ I + Y S + + +N + D Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 ++ N+ +D K + +L I G T P + + G++ KGCY Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+++R+ + + I G +P +G + + L G +AL IAR + Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPATGGD-MGRMSIVNALATDTGFEALVIARPE 212 Query: 246 KV 247 + Sbjct: 213 DL 214 >gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] Length = 349 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 32/265 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ I + G + +L +I + + LP + + L G++L +F ++ + ++ Sbjct: 46 SNRRVITLTGPDRLSWLHSITSQHLTALPDGGSVQNLNLDGSGRVLDHFWVTDSDGTAYL 105 Query: 67 LEIDRSKR-------DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----- 114 + L L R++V ++ + V+ + + + Sbjct: 106 DTEPATLAPKEAPLSPDLGTYLQRMVFRADVQVQARDDLAVLTVFGPDAATVAEAVPGVR 165 Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 I ER ++ D + + + Y R+ D Sbjct: 166 RSEPDEVNLIIERAAVPDAITTLVAAGARPVGT--WAYEARRVAAAHARAGLD-TDDKTI 222 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTD 223 PH+ + + L KGCY GQE ++R+ + +R +++ P +G P+ D Sbjct: 223 PHEVNW-IGTAVHLDKGCYRGQETIARVHNIGRPPRRLVLLHLDGSADATPATGDPVTVD 281 Query: 224 DIEIGTLGVVV-----GKKALAIAR 243 +G LG VV G ALA+ + Sbjct: 282 GRTVGRLGTVVEHADYGPIALALIK 306 >gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1] Length = 373 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 44/301 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L ++T V LP + +L QG++L + ++ DT Sbjct: 47 SHREVIAVSGEERLSWLHLLLTQHVSELPPDTGTEALVLDVQGRVLHHMAVAATG-DTVY 105 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE------------------ 107 L+ + + L+D L S V ++ V+ + Sbjct: 106 LDTEPGEGAPLLDYLTKMVFWSKVEPRDVTGEFAVLGVVGPDVPDVLEKAGLPLPPAPHG 165 Query: 108 -HTFSNSSFI----DERFSIADVLLHRTW--------GHNEKIASDIKTYHELRINHGIV 154 F+ DV++ R A+ + LR+ Sbjct: 166 VAALPGGGFVRRTPWPGRDAVDVVVPRDATGTWWSALTAAGARAAGTIAFEALRVESRAP 225 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTD 211 + D PH+ + + LTKGCY GQE V+R+ + +R +++ G + Sbjct: 226 RLHRD-TDDRTIPHEVGW-IGPAVHLTKGCYRGQETVARVANLGRPPRRQVLLLLDAGDE 283 Query: 212 DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVK 265 +LP +G P+ DD +G +G VV G ALA+ R VD + G+ V + Sbjct: 284 ELPRTGDPVRRDDRTVGRVGTVVQHHELGPVALALVKRSVPVDAELTAGVDDRVSPATID 343 Query: 266 A 266 Sbjct: 344 P 344 >gi|119964440|ref|YP_948688.1| aminomethyltransferase (glycine cleavage system Tprotein) [Arthrobacter aurescens TC1] gi|119951299|gb|ABM10210.1| putative aminomethyltransferase (Glycine cleavage system Tprotein) [Arthrobacter aurescens TC1] Length = 354 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 38/275 (13%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L + + + L +A +L+ QG+I + Sbjct: 37 VDLSHRGVVTVTGPDRLSWLNTLSSQQLTNLQPGVASELLLLSVQGRIEFDARVIDDGGT 96 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 T+++ ++ ++ + L L K V I ++ VV + + ++ + Sbjct: 97 TWLI-VETAEAEPLAVWLNRMKFMLRVEIQDVSEQWAVVGATKPLAQLAGRLVWEDPWPH 155 Query: 123 ADVLLH--------------RTWGHNEKIASDIKT------------YHELRINHGIVDP 156 + R W +++++ LRI Sbjct: 156 VSPGGYAYSIVPEESHPGLERPWYEYLVPSTELEQSVEGLALAGAMAADALRIAAWRPRL 215 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213 + PH+ + L + L KGCY GQE ++R+ + +R + + L Sbjct: 216 GAE-TDEKTIPHELDL-LRTSVHLNKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTL 273 Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 P GS + + ++GTL V G ALA+ + Sbjct: 274 PAVGSVVFVGERKVGTLTSVAQHFEMGPVALAVIK 308 >gi|332184093|gb|AEE26347.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Francisella cf. novicida 3523] Length = 248 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 20/209 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ D L+ L Y + S V + F+ + F++ D Sbjct: 66 LLSVEQEVFDDLLAWLKKYGMFSKVSFNSNDDYALF--------FTKTGFLNHDVLTKDS 117 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGC 184 L T + +++L P + +D L + TKGC Sbjct: 118 L---TSEMTFEQVQKENIFNKL-------ATINAANFEKFLPAELDLDNLDKVVCYTKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 Y+GQEV++R+ ++ ++K ++ D+ Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|328676869|gb|AEB27739.1| Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Francisella cf. novicida Fx1] Length = 248 Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 20/209 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ + F++ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGS 117 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGC 184 L+ +E +K + I N + P + +D +N + TKGC Sbjct: 118 LI------SEMTFEQVKKENIFNKLATINATNFE----KFLPAELDLDNVNKVVCYTKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 Y+GQEV++R+ ++ ++K ++ D+ Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|208779174|ref|ZP_03246520.1| hypothetical protein FTG_1468 [Francisella novicida FTG] gi|208744974|gb|EDZ91272.1| hypothetical protein FTG_1468 [Francisella novicida FTG] Length = 248 Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 22/210 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107 Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKG 183 L H I+ + + I + + N P + +D ++ + TKG Sbjct: 108 LNHDILTKGSLISEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 CY+GQEV++R+ ++ ++K ++ D+ Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|118497380|ref|YP_898430.1| hypothetical protein FTN_0786 [Francisella tularensis subsp. novicida U112] gi|195536070|ref|ZP_03079077.1| hypothetical protein FTE_1029 [Francisella tularensis subsp. novicida FTE] gi|118423286|gb|ABK89676.1| protein of unknown function [Francisella novicida U112] gi|194372547|gb|EDX27258.1| hypothetical protein FTE_1029 [Francisella tularensis subsp. novicida FTE] Length = 248 Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 20/209 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDSDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ D L+ L Y + S V + + F N + + I+++ Sbjct: 66 LLSVEQEVFDDLLAWLKKYGMFSKVSFNPNDDYALFFTKTG---FLNHDILTKGSLISEM 122 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGC 184 + E I + + T + P + +D + + TKGC Sbjct: 123 TFEQV--KKENIFNKLATINAANF-------------EKFLPAELDLDNVDKVVCYTKGC 167 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 Y+GQEV++R+ ++ ++K ++ D+ Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] Length = 341 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 47/298 (15%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V G+ + +L + + V + L G +L + ++ + +D+ +++ Sbjct: 27 YRVIEVTGEDRLTYLNTLFSQKVDDATPGTVTEALNLDANGHVLHHMTLTVL-DDSVLID 85 Query: 69 IDRSKRDSLIDKLLFYKLRSNVII----------------EIQPINGVVLSWNQEHTFSN 112 + DSL+ L S V I E+ G+ + T Sbjct: 86 VPPVGFDSLLKYLNMMVFWSKVEIAEAERAIISVMGPNAPEVLVSAGLAFPQVGKATTVG 145 Query: 113 SSFI----DERFSIADVLLHR--TWGHNEKIASDIKT------YHELRINHGIVDPNTDF 160 S++ R DVL+ R G E + + + + R+ + D Sbjct: 146 HSYVRHVPWPRGGRVDVLVRRQDLVGAWEALVAAGASPVGLMGWEAERVVSLRPELGID- 204 Query: 161 LPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDL 213 + + PH+A + + L KGCY GQE VSR+ + + +++ G+ L Sbjct: 205 VDEKMIPHEAPRWIASEFDTAAVHLDKGCYRGQETVSRVHNVGRSPRVLVMLQLDGSATL 264 Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 P +G P++ +G +G VV G ALA+ + + ++ L V V Sbjct: 265 PETGDPVMMGKRAVGRVGTVVQHADYGPIALALLK-----RSAQEREGLVVGDCAVAV 317 >gi|56708171|ref|YP_170067.1| hypothetical protein FTT_1088c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670642|ref|YP_667199.1| hypothetical protein FTF1088c [Francisella tularensis subsp. tularensis FSC198] gi|224457273|ref|ZP_03665746.1| hypothetical protein FtultM_06160 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370655|ref|ZP_04986660.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874978|ref|ZP_05247688.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604663|emb|CAG45721.1| hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320975|emb|CAL09104.1| hypothetical protein FTF1088c [Francisella tularensis subsp. tularensis FSC198] gi|151568898|gb|EDN34552.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840977|gb|EET19413.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159384|gb|ADA78775.1| hypothetical protein NE061598_06270 [Francisella tularensis subsp. tularensis NE061598] Length = 248 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 24/211 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ + F++ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGS 117 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLL-NGISLTK 182 L + T+ +++ + I + P + +D + + TK Sbjct: 118 L------------TSEMTFEQIQKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 GCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 166 GCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|254374202|ref|ZP_04989684.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571922|gb|EDN37576.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 248 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 24/211 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLN-GISLTK 182 L H I+ T+ +++ + I + P + +D ++ + TK Sbjct: 108 LNHDILTKGSLISE--MTFEQVKKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTK 165 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 GCY+GQEV++R+ ++ ++K ++ D+ Sbjct: 166 GCYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|297565303|ref|YP_003684275.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946] gi|296849752|gb|ADH62767.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946] Length = 339 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 44/297 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + ++V G F+ T+DV LP + L +G+I + + Sbjct: 41 ALLDFPETGLLQVGGMDCRDFIHNQCTSDVRGLPQGGFLKTLFLNSRGQIEFLGSVYQRG 100 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + L I ++ +L+++ Y + V + L + + + Sbjct: 101 QT---LWIAAARTQALLERFNRYIVFDQVELSDLSQAYTQLRLQGPAALEVGGQLGQPPA 157 Query: 122 I-----------------ADVLLHRTWG--------HNEKIASDIKTYHELRINHGIVDP 156 D+L+ R + + Y R+ G+ D Sbjct: 158 KWSLVEHHQVVLARDEWGLDILVPRDLAEEVFNQLLQAGATPAGREAYRVWRVEQGVADL 217 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 P + ++ +S KGCY+GQE+++R++ R R + M + G LPP Sbjct: 218 EDALGE---LPQEVGLEAR--VSYKKGCYLGQEIMARLEARGNTRYQLMGLLGQQPLPPE 272 Query: 217 GSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + + + ++G + +G ALA+ R + G + V + Sbjct: 273 -AEVWREGKKVGRVTTATDSPRLGPVALALLR-----KGLVPGDQVEVGAASPRLLR 323 >gi|326560812|gb|EGE11178.1| glycine cleavage T protein/aminomethyl transferase [Moraxella catarrhalis 46P47B1] Length = 233 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 28/242 (11%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ + ++ G + FLQ ITA++ + +AI +G++ I++ F Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLSTAICNLKGRVQFGIWIARTLA-GF 58 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + D+ I + Y S + + +N + D Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 ++ N+ +D K + +L I G T P + + G++ KGCY Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +GQE+++R+ + + I G +P +G + + L G +AL IAR + Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPATGGD-MGRMSIVNALATDTGFEALVIARPE 212 Query: 246 KV 247 + Sbjct: 213 DL 214 >gi|84498436|ref|ZP_00997206.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649] gi|84381179|gb|EAP97063.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649] Length = 342 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 43/300 (14%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V LS++ ++V G + +L +I T + L +++ S +L+P+G I I Sbjct: 45 LAVVDLSHRGVVRVTGPDRLTWLHSITTQQLTGLAPRVSTESLVLSPKGHIEHDLHIVDD 104 Query: 61 EEDTFILEIDRSKRDSLIDKLL--FYKLR---SNVI---------IEIQPINGVVLSWNQ 106 E T + ++ +L+ L + LR S+V + + G L+W Sbjct: 105 GEST-WITVEPGTSPALVAWLDSMRFMLRVEVSDVTDAYAVLGEPLSAASVEGEPLAWVD 163 Query: 107 EHT---------FSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIV 154 + E ++++ R ++ + I LR+ Sbjct: 164 PWPNLVADTAAYGPETEHPGESRRWRELIVPRADLEAAVGDRPLAGIWAAEALRVAAWRP 223 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212 + H+ L + L KGCY GQE V+R+ + +R + + Sbjct: 224 RLGFE-TDHRTIAHEVDW-LRTAVHLHKGCYRGQETVARVHNLGRPPRRIVFLHLDGSGH 281 Query: 213 -LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR------IDKVDHAIKKGMALTVH 260 LP +G+P++ + EIG + V G ALA+ + +D V + + V Sbjct: 282 LLPEAGAPLVLEGREIGRITSVARHHEDGPIALAVIKRNTPDDVDLVAGTVAGAQTVIVG 341 >gi|313828749|gb|EFS66463.1| folate-binding protein YgfZ [Propionibacterium acnes HL063PA2] Length = 313 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V + ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLALLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|289424224|ref|ZP_06426007.1| folate-binding protein YgfZ [Propionibacterium acnes SK187] gi|289154921|gb|EFD03603.1| folate-binding protein YgfZ [Propionibacterium acnes SK187] Length = 313 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V I ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEIALRPDMTVRW-FGHDVAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGAYIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|225848748|ref|YP_002728912.1| glycine cleavage T-protein C- barrel domain protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644667|gb|ACN99717.1| glycine cleavage T-protein C- barrel domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 297 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 107/295 (36%), Gaps = 43/295 (14%) Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49 M+ + L N+ I V G + FL I++ D++ L + +L +G Sbjct: 1 MNWISL-NRHKILVKGKKSKLNLKGVNEEHKAFLHNILSNDIVNLQTGRFNYNLMLDSKG 59 Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 L F + ++ +IL+ + + I+KL KL V E+ P + + Sbjct: 60 SPLTDFFVYN-NDNVYILDTEEDPYQT-IEKLNKLKLSLQVNFEVLPSRHLYIFGENVED 117 Query: 110 F---------------SNSSFIDERFSIADVLLHRTWGHNEKIAS--------DIKTYHE 146 F S+ F+ V + +G E I ++ + + Sbjct: 118 FIKSMGLNLEKFSFAKSHKYFVANNPLRLGVKGYDIFGDIENILDLLNPQDEISLQDFED 177 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI I + I P + + ISL KGCY+GQE V+R+ +R + Sbjct: 178 LRIKSCIPKIKKEL-KENILPLETNI-WKYAISLNKGCYVGQEAVARVYYRGKPPRVMAK 235 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV--GKKALA-IARIDKVDHAIKKGMALT 258 D+ I+ + IG + + GK L I R + G+ L Sbjct: 236 FLINKDIKEE-DKIIFEGKSIGIMTSITTDGKTGLGFILRAKAQEGKDYDGIILE 289 >gi|163784745|ref|ZP_02179551.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1] gi|159879986|gb|EDP73684.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1] Length = 306 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 105/285 (36%), Gaps = 42/285 (14%) Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49 M+ + L+ ++ IKV G + FL + T D+ L + + L +G Sbjct: 1 MNWIKLT-RAKIKVYGKKSKLAIKGVAEEHKAFLHGLFTNDINGLLPEHFNYNLRLNGKG 59 Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQE 107 + F + E FIL+ + D +I++ KL V E Q + + Sbjct: 60 YPVQDFFVYNFGE-YFILDT-KENADKVIEEFTKLKLSMQVFFENLTQQNEHIYIFGENT 117 Query: 108 HTFSNSSF----------------IDERFSIADVLLHRTWGHNEKIAS--------DIKT 143 F +F I + F + +G+ EK+ + + Sbjct: 118 DKFVEENFNISLKPFEFKTVKNFTIAKNFLRNGENGYDFFGNLEKVKTLLPKENEISQEE 177 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +RI + I + + P + + IS TKGCY+GQEV++R+ +R + Sbjct: 178 FENIRIKNCIPKIHKELKEG-YLPLETPI-TPYAISFTKGCYVGQEVIARVHYRGKPPRT 235 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248 G I+ D +IG + V + +A+ I K Sbjct: 236 LAKFEVDRQKIKEGEKIIDGDKKIGEITSVSPVENIALGYILKAK 280 >gi|50841834|ref|YP_055061.1| putative glycine cleavage T-protein [Propionibacterium acnes KPA171202] gi|289428836|ref|ZP_06430516.1| folate-binding protein YgfZ [Propionibacterium acnes J165] gi|295129911|ref|YP_003580574.1| folate-binding protein YgfZ [Propionibacterium acnes SK137] gi|50839436|gb|AAT82103.1| conserved protein, putative glycine cleavage T-protein [Propionibacterium acnes KPA171202] gi|289157837|gb|EFD06060.1| folate-binding protein YgfZ [Propionibacterium acnes J165] gi|291376436|gb|ADE00291.1| folate-binding protein YgfZ [Propionibacterium acnes SK137] gi|313772891|gb|EFS38857.1| folate-binding protein YgfZ [Propionibacterium acnes HL074PA1] gi|313793088|gb|EFS41155.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA1] gi|313802465|gb|EFS43687.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA2] gi|313806479|gb|EFS44986.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA2] gi|313811031|gb|EFS48745.1| folate-binding protein YgfZ [Propionibacterium acnes HL083PA1] gi|313814468|gb|EFS52182.1| folate-binding protein YgfZ [Propionibacterium acnes HL025PA1] gi|313817348|gb|EFS55062.1| folate-binding protein YgfZ [Propionibacterium acnes HL046PA2] gi|313821907|gb|EFS59621.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA1] gi|313824197|gb|EFS61911.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA2] gi|313826565|gb|EFS64279.1| folate-binding protein YgfZ [Propionibacterium acnes HL063PA1] gi|313831794|gb|EFS69508.1| folate-binding protein YgfZ [Propionibacterium acnes HL007PA1] gi|313834662|gb|EFS72376.1| folate-binding protein YgfZ [Propionibacterium acnes HL056PA1] gi|313840107|gb|EFS77821.1| folate-binding protein YgfZ [Propionibacterium acnes HL086PA1] gi|314926721|gb|EFS90552.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA3] gi|314961072|gb|EFT05173.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA2] gi|314964500|gb|EFT08600.1| folate-binding protein YgfZ [Propionibacterium acnes HL082PA1] gi|314974666|gb|EFT18761.1| folate-binding protein YgfZ [Propionibacterium acnes HL053PA1] gi|314977139|gb|EFT21234.1| folate-binding protein YgfZ [Propionibacterium acnes HL045PA1] gi|314980445|gb|EFT24539.1| folate-binding protein YgfZ [Propionibacterium acnes HL072PA2] gi|314985763|gb|EFT29855.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA1] gi|314987286|gb|EFT31377.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA2] gi|314989170|gb|EFT33261.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA3] gi|315078485|gb|EFT50516.1| folate-binding protein YgfZ [Propionibacterium acnes HL053PA2] gi|315082052|gb|EFT54028.1| folate-binding protein YgfZ [Propionibacterium acnes HL078PA1] gi|315082808|gb|EFT54784.1| folate-binding protein YgfZ [Propionibacterium acnes HL027PA2] gi|315086164|gb|EFT58140.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA3] gi|315087748|gb|EFT59724.1| folate-binding protein YgfZ [Propionibacterium acnes HL072PA1] gi|315097497|gb|EFT69473.1| folate-binding protein YgfZ [Propionibacterium acnes HL038PA1] gi|315106415|gb|EFT78391.1| folate-binding protein YgfZ [Propionibacterium acnes HL030PA1] gi|327331417|gb|EGE73156.1| folate-binding protein YgfZ [Propionibacterium acnes HL096PA2] gi|327333403|gb|EGE75123.1| folate-binding protein YgfZ [Propionibacterium acnes HL096PA3] gi|327334927|gb|EGE76638.1| folate-binding protein YgfZ [Propionibacterium acnes HL097PA1] gi|327445578|gb|EGE92232.1| folate-binding protein YgfZ [Propionibacterium acnes HL013PA2] gi|327447198|gb|EGE93852.1| folate-binding protein YgfZ [Propionibacterium acnes HL043PA1] gi|327449767|gb|EGE96421.1| folate-binding protein YgfZ [Propionibacterium acnes HL043PA2] gi|327457035|gb|EGF03690.1| folate-binding protein YgfZ [Propionibacterium acnes HL092PA1] gi|328758819|gb|EGF72435.1| folate-binding protein YgfZ [Propionibacterium acnes HL020PA1] gi|328761832|gb|EGF75344.1| folate-binding protein YgfZ [Propionibacterium acnes HL099PA1] gi|332674750|gb|AEE71566.1| glycine cleavage T protein [Propionibacterium acnes 266] Length = 313 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V + ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|134302296|ref|YP_001122265.1| putative aminomethyl transferase [Francisella tularensis subsp. tularensis WY96-3418] gi|134050073|gb|ABO47144.1| putative aminomethyl transferase [Francisella tularensis subsp. tularensis WY96-3418] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107 Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183 L H + + + I + + N P + +D + + TKG Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 CY+GQEV++R+ ++ ++K ++ D+ Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|302535834|ref|ZP_07288176.1| glycine cleavage T protein [Streptomyces sp. C] gi|302444729|gb|EFL16545.1| glycine cleavage T protein [Streptomyces sp. C] Length = 322 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + + Sbjct: 43 VDLSHRGVVTVTGADRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLV-DDGE 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERFS 121 T ++ +++L+ L K V + + + V+ + E Sbjct: 102 TVWAHVEPGTQEALLGYLESMKFFYRVEVADRTADFAVVHLPAGSIAEPGKEHVVRETAH 161 Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L R A Y LR+ + PH+ + Sbjct: 162 GRDVFLPRPQLEAFAAAHGPAAGLLAYEALRVEAHRPRVGAE-TDHRTIPHELGW-IGTA 219 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LP G+P+ D ++G Sbjct: 220 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPVRLAADGEDGRQLGF 279 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + G V V Sbjct: 280 VTTAVRHHELGPIALALVKRNVPVDAPLLAGNTAAAQEVVVAP 322 >gi|314969600|gb|EFT13698.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA1] gi|315110305|gb|EFT82281.1| folate-binding protein YgfZ [Propionibacterium acnes HL030PA2] Length = 313 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V + ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|282853410|ref|ZP_06262747.1| folate-binding protein YgfZ [Propionibacterium acnes J139] gi|282582863|gb|EFB88243.1| folate-binding protein YgfZ [Propionibacterium acnes J139] gi|314982546|gb|EFT26639.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA3] gi|315091041|gb|EFT63017.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA4] Length = 313 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMERGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + S+ L L + V + ++P V + + + +D + Sbjct: 94 QTFWVWTEPSRGADLGAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVPDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|307329882|ref|ZP_07609036.1| folate-binding protein YgfZ [Streptomyces violaceusniger Tu 4113] gi|306884493|gb|EFN15525.1| folate-binding protein YgfZ [Streptomyces violaceusniger Tu 4113] Length = 321 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L +IT V LP A + IL+ G I I + + Sbjct: 42 VDLSHRGVVTVTGADRLSWLHLLITQHVSELPPGQATEALILSTHGHIEHALYIV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T ++ + LI L K V I + + V+ + + E Sbjct: 101 TTWAHVEPDSQGDLIAYLESMKFFYRVDIADRSDDYAVVHLPAGSITEAPEDTVVRETPH 160 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A + Y LR+ + PH+ + + Sbjct: 161 GRDLFLPRARLTDFAEASGPAIGVLAYEALRVEAHRPRVGLE-TDHRTIPHELGW-IGSA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LP G+PI + ++G Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVTLPSHGAPIRLASEGEEGRQLGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + V+ Sbjct: 279 ITSSARHHELGPIALALVKRNVPVDAELIADSTAAAQETVVEP 321 >gi|297627128|ref|YP_003688891.1| glycine cleavage T-protein, aminomethyl transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922893|emb|CBL57475.1| glycine cleavage T-protein, aminomethyl transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 349 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 46/301 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V L+N+ + V G + +L ++ T LP + IL+P G++ Sbjct: 34 AIVALTNRQVLTVTGDDRLGWLHSLSTGRFDGLPPGQGLNALILSPTGQVRYGLQAVDDG 93 Query: 62 EDTFILEIDRSKRDS----------------------LIDKLLFYKLRSNVIIEIQPING 99 E +++ S L + L + R V + + Sbjct: 94 ERLWVITDPASSASPDDPAEPAPATGVPTGPDMQGVGLAEFLDSMRFRLKVQVSPRDDAR 153 Query: 100 VVLSWNQ----EHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHG 152 V+ + + + +D +++ + + + + R+ G Sbjct: 154 VLWVGEGIDPADLPAALAPAVDAPLGHGQLVIVAADDVPSPDNPRLAGVWAWEAARVAAG 213 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D P++ + L KGCY GQE V+R+ + +R + + Sbjct: 214 VPRIGID-TDDKTLPNELGL---YATELDKGCYTGQETVARVHNVGRPPRRLVRLLLDGS 269 Query: 213 ---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 LP G PIL D +G +G G AL + R A+ L+V + Sbjct: 270 MNRLPAPGDPILLDGEPVGVVGSSAQHFEEGPIALGLVR-----RAVPVEATLSVDDIAA 324 Query: 265 K 265 Sbjct: 325 N 325 >gi|294814029|ref|ZP_06772672.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064] gi|326442433|ref|ZP_08217167.1| hypothetical protein SclaA2_15264 [Streptomyces clavuligerus ATCC 27064] gi|294326628|gb|EFG08271.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064] Length = 330 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 29/290 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS++ + V G+ + +L ++T + LP A + IL+ G + + Sbjct: 44 LVDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG- 102 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------GVVLSWNQEHTFSNSS 114 DT ++ ++ LI L K V + + + G + + + + Sbjct: 103 DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTETV 162 Query: 115 FIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 + E D+ L R ++ + + Y LR+ + PH+ Sbjct: 163 VVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVEAHRPRVGFE-TDHRTIPHEL 221 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----T 222 + + L KGCY GQE V+R+Q+ +R + + LP +G+PI Sbjct: 222 GW-IGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAADGE 280 Query: 223 DDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + ++G + G ALA+ R VD A+ G V+ Sbjct: 281 EGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAGTTAASQETVVEP 330 >gi|254388558|ref|ZP_05003792.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197702279|gb|EDY48091.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 29/290 (10%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS++ + V G+ + +L ++T + LP A + IL+ G + + Sbjct: 41 LVDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG- 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------GVVLSWNQEHTFSNSS 114 DT ++ ++ LI L K V + + + G + + + + Sbjct: 100 DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTETV 159 Query: 115 FIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 + E D+ L R ++ + + Y LR+ + PH+ Sbjct: 160 VVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVEAHRPRVGFE-TDHRTIPHEL 218 Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----T 222 + + L KGCY GQE V+R+Q+ +R + + LP +G+PI Sbjct: 219 GW-IGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAADGE 277 Query: 223 DDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + ++G + G ALA+ R VD A+ G V+ Sbjct: 278 EGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAGTTAASQETVVEP 327 >gi|163783071|ref|ZP_02178066.1| hypothetical protein HG1285_00810 [Hydrogenivirga sp. 128-5-R1-1] gi|159881751|gb|EDP75260.1| hypothetical protein HG1285_00810 [Hydrogenivirga sp. 128-5-R1-1] Length = 308 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 114/305 (37%), Gaps = 46/305 (15%) Query: 1 MSSVYLSNQSFIKVCG-------------KSAIPFLQAIITADVLTLPYKIARGSAILTP 47 M + L N+S +K+ G + FL +++T +V L + L Sbjct: 1 MKWIEL-NRSKVKIFGKPAKVLMKGMTAPEEHTHFLHSLLTNNVKALSPGTFNYNLWLRQ 59 Query: 48 QGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105 G+ + F + K++ D ++L+ D+ + +I++ KL V E Q + + L Sbjct: 60 NGQPVADFFVYKVQ-DYYLLDTDKP-AEEVIEEFNRLKLSLKVYFEDLTQQLRHIFLFGE 117 Query: 106 QEHTFSNSSFIDE---------------------RFSIADVLLHRTWGHNEKIASD---I 141 F +F E R DV+ + E D Sbjct: 118 GSDEFIKDAFGVEFGDFEVKEINGLLVAKNPVRLRQKGYDVMGDLSNFMGELPEGDRIGE 177 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + +LRI + + P +A + L I + KGCY+GQE ++R+ R Sbjct: 178 VEFEDLRIERCVPRIGKELKEG-FSPLEAGV-LSYAIDMNKGCYVGQEAIARVYFRGRTP 235 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 + + + + G +L +G + V LA+ + + + + GM ++ G Sbjct: 236 RMLVKVHKVEGSIQEGDKLLEGQKAVGVITSVNSTGELALGYV--LRNIYRPGMEVSTAG 293 Query: 262 VRVKA 266 +++ Sbjct: 294 GKIRL 298 >gi|329936234|ref|ZP_08286027.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045] gi|329304344|gb|EGG48224.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045] Length = 323 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G+ + +L ++T V LP A + IL+P G I + + + Sbjct: 44 VDLSHRGVVTVTGEDRLSWLHLLLTQHVSDLPAHRATEALILSPHGHIEHALYLV-DDGE 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 T ++ +++L+ L K + V + + + ++ + R + Sbjct: 103 TTWAHVEPGTQEALVAYLESMKFFNRVEVADRTADYALVHQPAGSIADVPGGVVVRETPY 162 Query: 124 DVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 L G E A+ + Y LR+ + PH+ + Sbjct: 163 GRELFLPRGDLEAYAAGHGPAAGLLAYEALRVEQHRPRLGFE-TDHRTIPHELGW-IATA 220 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP G+ + + +IG Sbjct: 221 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPQGTELRLAADGPEGRKIGF 280 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + V+ Sbjct: 281 ITTSVRHHELGPVALALVKRNVPVDAPLLADSTAAAQETVVEP 323 >gi|302559915|ref|ZP_07312257.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces griseoflavus Tu4000] gi|302477533|gb|EFL40626.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces griseoflavus Tu4000] Length = 321 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 106/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + + Sbjct: 42 VDLSHRGVVTVSGPERLAWLHLLLTQHVSDLPPHRATEALILSANGHIEHALYLV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-- 121 T ++ +++LI L K V + + + V+ + R + Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEAPEGVAVRETPY 160 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A+ + + LR+ + PH+ + Sbjct: 161 GRDLFLPRADLEAYAEKAGPAAGLLAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGTA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP+G+ I + IG Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGTEIRVADDGAEGRRIGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + G V+ Sbjct: 279 VTTSVRHHELGPVALALVKRNVPVDARLLAGETAAAQETVVEP 321 >gi|256397340|ref|YP_003118904.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928] gi|256363566|gb|ACU77063.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928] Length = 335 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 98/282 (34%), Gaps = 32/282 (11%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ ++V G + +L + + + +L +A + IL+PQG++ + E Sbjct: 43 VDLSHRGVLRVSGPDRLTWLHSFTSQHLESLKPGVAVEALILSPQGRVEHALYLVDDGEA 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 T+ ++ ++ L + V E ++ + D + Sbjct: 103 TWF-HVEPGAAPEILAFLQKMRFMMRVEPEDVTAGYALV-------LTTGPVPDGVLARE 154 Query: 124 DVLLHRTWGHNEKIA-----------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 L H + E++A + + Y LRI + PH+ + Sbjct: 155 VDLGHELFLPRERLASFAKDGGAGDPAGMWAYEALRIAAHRPRVGRE-TDDRTIPHE--I 211 Query: 173 DLL------NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI-LT 222 D + + L KGCY GQE V+R+ + +R + + LP G+ + Sbjct: 212 DWIASEGHPGAVHLNKGCYRGQETVARVDNLGHPPRRLVFLHLDGTPERLPAHGADVTTA 271 Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 D +G + L + V L G+ Sbjct: 272 DGRVVGQVTSAARHYELGHVALAVVKRTTPVDDQLLADGIPA 313 >gi|254372745|ref|ZP_04988234.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570472|gb|EDN36126.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 248 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107 Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183 L H + + + I + + N P + +D + + TKG Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 CY+GQEV++R+ ++ ++K ++ D+ Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSQVDI 196 >gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] Length = 364 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 100/301 (33%), Gaps = 44/301 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L ++ + L +L QG++ + +++ + Sbjct: 47 SHRGVIAVPGEDRLTWLHSLTSQHFTALGQDRGTEMLVLDAQGRVEHHAVVANTGGTAY- 105 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L+++ L++ L S V +L+ Sbjct: 106 LDVEAETTAPLLEYLSRMVFWSKVEPRDATAELALLTVAGPDAAELLGKLDVPVPDGADG 165 Query: 110 --------------FSNSSFID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + +D R + D A+ + LR+ Sbjct: 166 VRELPGGGFARRVSWPGAGAVDLLVPRGELGD--WWSRLTGAGARAAGSWAFTALRVESL 223 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 P D PH+ + + + L KGCY GQE V+++Q+ +R +++ Sbjct: 224 RPRPGVD-TDEKTIPHEVNW-IGSAVHLDKGCYRGQETVAKVQNVGRPPRRMLLLHLDGT 281 Query: 213 ---LPPSGSPILTDDIEIGTLGVVVGKKALA--IARIDKVDHAIKKGMALTVHGVRVKAS 267 P +G P+ D +G +G V L + + K + + + V+AS Sbjct: 282 REVQPETGDPVRHGDRVVGRVGSVALHHDLGPVVLALVKRSVPVDAELLVGAEDRVVQAS 341 Query: 268 F 268 Sbjct: 342 V 342 >gi|302543595|ref|ZP_07295937.1| folate-binding protein YgfZ [Streptomyces hygroscopicus ATCC 53653] gi|302461213|gb|EFL24306.1| folate-binding protein YgfZ [Streptomyces himastatinicus ATCC 53653] Length = 324 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 22/259 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + + Sbjct: 45 VDLSHRGVVTVTGADRLSWLHLLLTQHVSELPAGEATEALILSAHGHIEHALYLV-DDGE 103 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ + LI L K V I + V+ S+ E Sbjct: 104 TTWAHVEPGSQGDLIAYLESMKFFYRVEIADRTEEYAVVHLPAGSIAETPGSAVARETAH 163 Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + AS Y LR+ + PH+ + Sbjct: 164 GRDLFLPRAGLESFAAASGPAIGVLAYEALRVEAHRPRIGLE-TDHRTIPHELGW-IGTA 221 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LP G+PI D ++G Sbjct: 222 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVKLPGHGAPIRLAADGEDGRQLGF 281 Query: 230 LGVVV-----GKKALAIAR 243 + G ALA+ + Sbjct: 282 VTSSARHHELGPIALALVK 300 >gi|29830571|ref|NP_825205.1| hypothetical protein SAV_4028 [Streptomyces avermitilis MA-4680] gi|29607683|dbj|BAC71740.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 321 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 108/283 (38%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LSN+ + V G+ + +L ++T V LP A + IL+ G I + + Sbjct: 42 VDLSNRGVVTVTGEDRLSWLHLLLTQHVSELPAHRATEALILSAHGHIEHALYLV-DDGT 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122 T ++ +++LI L K V + + V+ + + R + Sbjct: 101 TTWAHVEPGTQEALIAYLESMKFFYRVEVADRTGEFAVVHLPAGSIADVPADVVVRETAY 160 Query: 123 -ADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A+ + Y LR+ H + PH+ + + Sbjct: 161 GRDLFLPRAELESYADRSGPAAGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGSA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP G+ + D +IG Sbjct: 219 VHLEKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPHGTELRLADDGPDGRKIGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R +D + V V+ Sbjct: 279 VTTSVRHHELGPIALALVKRNVPLDAPLVADNTAAAQEVVVEP 321 >gi|314922326|gb|EFS86157.1| folate-binding protein YgfZ [Propionibacterium acnes HL001PA1] gi|314965386|gb|EFT09485.1| folate-binding protein YgfZ [Propionibacterium acnes HL082PA2] gi|315094129|gb|EFT66105.1| folate-binding protein YgfZ [Propionibacterium acnes HL060PA1] gi|315104778|gb|EFT76754.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA2] gi|327329331|gb|EGE71091.1| folate-binding protein YgfZ [Propionibacterium acnes HL103PA1] Length = 313 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMERGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + + L L + V + ++P V + + + +D + Sbjct: 94 QTFWVWTEPGRGADLGAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVPDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|89256440|ref|YP_513802.1| hypothetical protein FTL_1115 [Francisella tularensis subsp. holarctica LVS] gi|115314875|ref|YP_763598.1| hypothetical protein FTH_1088 [Francisella tularensis subsp. holarctica OSU18] gi|169656621|ref|YP_001428607.2| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367777|ref|ZP_04983798.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp. holarctica 257] gi|254369408|ref|ZP_04985420.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|290953920|ref|ZP_06558541.1| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica URFT1] gi|295312720|ref|ZP_06803463.1| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica URFT1] gi|89144271|emb|CAJ79554.1| hypothetical protein FTL_1115 [Francisella tularensis subsp. holarctica LVS] gi|115129774|gb|ABI82961.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253588|gb|EBA52682.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp. holarctica 257] gi|157122358|gb|EDO66498.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|164551689|gb|ABU61651.2| putative aminomethyl transferase/glycine cleavage T-protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 248 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 +N ++V G FLQ + TAD+ L +A +G+I+ + I + Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L +++ ++L+ L Y + S V + F+ Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNNDYALF------------------FTKTGF 107 Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183 L H + + + I + + N P + +D + + TKG Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 CY+GQEV++R+ ++ ++K ++ D+ Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196 >gi|290959378|ref|YP_003490560.1| hypothetical protein SCAB_49691 [Streptomyces scabiei 87.22] gi|260648904|emb|CBG72018.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 321 Score = 121 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 104/283 (36%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ I V G+ + +L ++T V LP A + IL+ G I + + Sbjct: 42 VDLSHRGVIAVSGEDRLSWLHLLLTQHVSELPVGEATEALILSANGHIEHALYLV-DDGT 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T + R++L+ L K V + + + V+ + + E Sbjct: 101 TVWAHAEPGTREALLAYLESMKFFYRVDVADRTDDVAVVHLPAGSITQIPAGTVVRETPY 160 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A + Y LR+ H + PH+ + Sbjct: 161 GRDLFLPRADLESFAEKAGPAVGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGTA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP G+ + D ++G Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPRGAELRLADDGPDGRKLGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + V+ Sbjct: 279 VTTSVRHHELGPVALALIKRNVPVDARLMADTTAAAQETVVEP 321 >gi|149918180|ref|ZP_01906672.1| LigA [Plesiocystis pacifica SIR-1] gi|149820940|gb|EDM80347.1| LigA [Plesiocystis pacifica SIR-1] Length = 330 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 109/290 (37%), Gaps = 38/290 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S++ +++ + V G+ A FLQ ++TADV L A + +LT +GK++ + Sbjct: 13 LSALPRQDRAVVHVAGEDAARFLQGLLTADVSALTPGRAIPAGLLTVKGKLVSELWVLAT 72 Query: 61 ------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 +E L + +S+ L + + +V +E P G + + S + Sbjct: 73 VDPDDEDETRLALALPAELAESVTKALDDHIIMDDVELET-PEPGAAALLLRFGSLSEAK 131 Query: 115 FIDE----RFSIADVLLHRTW--------------GHNEKIASDIKTYHELRINHGIVDP 156 RF+ A L W +D T+ R++ Sbjct: 132 VEAPAGVARFTCAHPLAGELWLGSTSALAEAAAALAAAGSQVADAPTFTRARVDQARPAW 191 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + P FP + ++ +S KGCY+GQE +SRI +R + + + + + + Sbjct: 192 GFELTPDR-FPPEIGF--VDAVSYAKGCYLGQEPLSRIHNRGQVNRVMVRVMAMEPPSQA 248 Query: 217 GSP----ILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256 + +L +D E+G LA+ R + A Sbjct: 249 MADGPIALLAEDKEVGAWTSWAPSNDGSSAVGLAVIRRAHAKPGTQLRTA 298 >gi|313765561|gb|EFS36925.1| folate-binding protein YgfZ [Propionibacterium acnes HL013PA1] gi|313815038|gb|EFS52752.1| folate-binding protein YgfZ [Propionibacterium acnes HL059PA1] gi|314915800|gb|EFS79631.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA4] gi|314917071|gb|EFS80902.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA1] gi|314921347|gb|EFS85178.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA3] gi|314931330|gb|EFS95161.1| folate-binding protein YgfZ [Propionibacterium acnes HL067PA1] gi|314954847|gb|EFS99253.1| folate-binding protein YgfZ [Propionibacterium acnes HL027PA1] gi|314958782|gb|EFT02884.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA1] gi|315099949|gb|EFT71925.1| folate-binding protein YgfZ [Propionibacterium acnes HL059PA2] gi|327454616|gb|EGF01271.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA3] gi|327456688|gb|EGF03343.1| folate-binding protein YgfZ [Propionibacterium acnes HL083PA2] gi|328755671|gb|EGF69287.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA1] gi|328756452|gb|EGF70068.1| folate-binding protein YgfZ [Propionibacterium acnes HL025PA2] Length = 313 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L ++ + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L V + ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMCFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|313835602|gb|EFS73316.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA2] gi|314970303|gb|EFT14401.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA3] gi|328908142|gb|EGG27901.1| putative glycine cleavage T-protein [Propionibacterium sp. P08] Length = 313 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ LSN+ + V G + +L ++ + + + S +L+P G + L + Sbjct: 35 SIELSNREVLAVSGVDRLGWLHSLTSQFLDDIEPGRTTTSLVLSPTGHVKH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V +E++P + + S +D + Sbjct: 94 QTFWAWTEPGRGACLAAWLDSMRFMMRVDVELRPDM-TIRWVGHDVAVSEGVVLDSEVAG 152 Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +L + + + + LRI G+ D P++ + G L Sbjct: 153 GREVILPDDSVAFSAVEPVGVLAWEALRIAAGVPRIGLD-TDDRTIPNEIGL---YGTHL 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVHNLGRPPRRLTLLQLDGSRAELPEVGAEIHAGGRRVGAMGSSANHY 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGITA 295 >gi|282898930|ref|ZP_06306913.1| Glycine cleavage T protein (aminomethyl transferase) [Cylindrospermopsis raciborskii CS-505] gi|281196184|gb|EFA71098.1| Glycine cleavage T protein (aminomethyl transferase) [Cylindrospermopsis raciborskii CS-505] Length = 327 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 99/296 (33%), Gaps = 47/296 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G+ + FL T ++ +L + ++T + + + + ED + Sbjct: 27 SHWGRIEVTGEDRLRFLHNQSTNNLESLQPGSGCDTVMVTSTARTI-DLVTGYVLEDRVL 85 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVIIEI------------------------------- 94 L + ++R+ L+ L Y + V + Sbjct: 86 LLVSPNRREFLLSWLDRYIFFADQVTLTDITEQTATFTLLGPESDTIISKLGVASLLSQP 145 Query: 95 ----QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 ING++ + + I R + + + + + LRI+ Sbjct: 146 DGHHISINGIIFAVGTGLAIPGYTLILPRAEK--QQIWQQLLDWGAVKLSDRHWEMLRIS 203 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G P+ + P + + +S KGCYIGQE ++R+ +++ I Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQHLWGIKLK 260 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262 + G+ I + ++G L + G L R + + T + Sbjct: 261 N-CAQPGTIITISEEKVGKLTSYIETPEGHFGLGYIRAKAGGVGLTVEVGETQGEI 315 >gi|46518443|gb|AAS99703.1| At1g60990 [Arabidopsis thaliana] Length = 423 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 101/304 (33%), Gaps = 57/304 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS+ I+V G FL TA+ +L + +TP + + + I K Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 164 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111 + +L + + S+I+ L Y + V I+ + + + Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 223 Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143 S DE F V + +T I Sbjct: 224 LIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 283 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P + +A + N ISL KGCY GQE ++R+ + I++R Sbjct: 284 WEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQR 340 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257 + + GS I D ++G L G K L + A G + Sbjct: 341 LCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK----KQAASIGNTV 395 Query: 258 TVHG 261 TV Sbjct: 396 TVGE 399 >gi|79367480|ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana] gi|145326078|ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana] gi|186492130|ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana] gi|51969110|dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana] gi|332195639|gb|AEE33760.1| aminomethyltransferase [Arabidopsis thaliana] gi|332195640|gb|AEE33761.1| aminomethyltransferase [Arabidopsis thaliana] gi|332195641|gb|AEE33762.1| aminomethyltransferase [Arabidopsis thaliana] Length = 432 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 101/304 (33%), Gaps = 57/304 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS+ I+V G FL TA+ +L + +TP + + + I K Sbjct: 116 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 173 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111 + +L + + S+I+ L Y + V I+ + + + Sbjct: 174 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 232 Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143 S DE F V + +T I Sbjct: 233 LIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 292 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P + +A + N ISL KGCY GQE ++R+ + I++R Sbjct: 293 WEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQR 349 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257 + + GS I D ++G L G K L + A G + Sbjct: 350 LCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK----KQAASIGNTV 404 Query: 258 TVHG 261 TV Sbjct: 405 TVGE 408 >gi|297837379|ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata] gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata subsp. lyrata] Length = 423 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 101/304 (33%), Gaps = 57/304 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V LS+ I+V G FL TA+ +L + +TP + + + I K Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLSEGQGCDTVFVTPTARTIDIAHAWIMK-- 164 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111 + +L + + S+I+ L Y + V I+ + + + Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 223 Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143 S DE F V + +T I Sbjct: 224 LIGQPYGNHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 283 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P + +A + N ISL KGCY GQE ++R+ + I++ Sbjct: 284 WEKLRITQGRPAPEREL-SKEYNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQW 340 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL 257 + + GSPI+ D ++G L G L + A G + Sbjct: 341 LCGLNLSAP-AEPGSPIIVDGKKVGKLTSYTRGREGSGHFGLGYIK----KQAASIGNTV 395 Query: 258 TVHG 261 T+ Sbjct: 396 TIGE 399 >gi|297158473|gb|ADI08185.1| hypothetical protein SBI_05065 [Streptomyces bingchenggensis BCW-1] Length = 317 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 102/283 (36%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+P G I I + + Sbjct: 38 VDLSHRGVVTVAGPDRLSWLHLLLTQHVSELPAGQATEALILSPHGHIEHALYIV-DDGE 96 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T ++ + L+ L K V + V+ + + E Sbjct: 97 TTWAHVEPGTQGDLLAYLESMKFFYRVETADRTEEFAVVHLPAGSIAEAPEGAAVRETPY 156 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + + + Y LR+ + PH+ + + + Sbjct: 157 GRDLFLPRADLESFAAASGPPAGVLAYEALRVEAHRPRLGLE-TDHRTIPHELGL-IGSA 214 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+++ +R + + LP G+P+ +G Sbjct: 215 VHLHKGCYRGQETVARVENLGKPPRRLVFLHLDGSEVTLPGHGAPVRLASEGAAGRTLGF 274 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD A+ V V+ Sbjct: 275 VTTSARHHELGPIALALVKRNVPVDAALIVDTTAAAQEVVVEP 317 >gi|182437765|ref|YP_001825484.1| hypothetical protein SGR_3972 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778400|ref|ZP_08237665.1| folate-binding protein YgfZ [Streptomyces cf. griseus XylebKG-1] gi|178466281|dbj|BAG20801.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658733|gb|EGE43579.1| folate-binding protein YgfZ [Streptomyces cf. griseus XylebKG-1] Length = 321 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 103/283 (36%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G+ + +L +IT V L A + IL+ G I + + Sbjct: 42 VDLSHRGVVTVTGEDRLSWLHLLITQHVTDLAPNRATEALILSANGHIEHAMYLV-DDGT 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 T + ++ + LI L K R+ V I V L + + E Sbjct: 101 TVWMHVEPGSQGELIAYLESMKFFYRAEVADRTGDIAVVHLPAGSIAEVPDGVVVRETPQ 160 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R T+ A+ I Y LR+ + PH+ + Sbjct: 161 GRDLFLPRADLETYAAAHGPAAGILAYEALRVEGHRPRVGFE-TDHRTIPHELGW-IGGA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LP G+P+ + ++G Sbjct: 219 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 279 ITTSARHHELGPIALALVKRNVAVDAELLAGDTAAAQETVVEP 321 >gi|119510709|ref|ZP_01629837.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia spumigena CCY9414] gi|119464663|gb|EAW45572.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia spumigena CCY9414] Length = 327 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 100/296 (33%), Gaps = 47/296 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V + FL T D +L + +++ + + + + + ED + Sbjct: 27 SHWGRIRVSDDDHLRFLHNQSTNDFQSLKPGQGCDTVMVSSTARTI-DLVSAYVLEDAVL 85 Query: 67 LEIDRSKRDSLIDKLLFYKL----------------------RSNVIIEI---------- 94 L S+R++L L Y +S+ I+E Sbjct: 86 LLTSPSRREALFQWLDRYIFYADKVQLQDITNETSTFSLIGAKSDAIVEKLGAGAIIGKP 145 Query: 95 ----QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 Q ++GV+++ + I A L + + + + LRI Sbjct: 146 YGSHQQVDGVMVAVGSGLAEPGYTLILPNSEKAQ--LWQQILELGAVELSDRAWDMLRIL 203 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G P+ + P + + IS KGCYIGQE ++R+ +++ I Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--ISFNKGCYIGQETIARLNTYKGVKQYLWGIRLN 260 Query: 211 DDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGV 262 + GS I D ++G L G L R +K + T V Sbjct: 261 APV-EVGSAITVGDEKVGKLTSYTETANGHFGLGYIRSKAGGVGLKVQVGETEGEV 315 >gi|312796399|ref|YP_004029321.1| aminomethyltransferase family protein [Burkholderia rhizoxinica HKI 454] gi|312168174|emb|CBW75177.1| Aminomethyltransferase family protein [Burkholderia rhizoxinica HKI 454] Length = 324 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 36/198 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S I V G A FL +T D+ TL R + +P+G++L L+ + + Sbjct: 76 LDQFSVIDVHGDDAASFLHGQLTNDIQTLEAGSVRLAGFCSPKGRLLATLLVWRAGDAVR 135 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VII 92 +L + L +L + LR+ V + Sbjct: 136 ML-VSADLAAPLQKRLSMFVLRAKARLTNTTDDLAVVGFAGDVRAALSQCFEALPDGVHV 194 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 +I G ++ + ++ R ++ L H + A + L I G Sbjct: 195 KIDTACGELIRVPDANGVPRFLWVGPRAAVDAKLAALNATHRARRAVP-ALWDWLDIRAG 253 Query: 153 IVDPNTDFLPSTIFPHDA 170 N P Sbjct: 254 EPRVNA-ATSEQFVPQMI 270 >gi|17231547|ref|NP_488095.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC 7120] gi|17133190|dbj|BAB75754.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC 7120] Length = 327 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 90/278 (32%), Gaps = 48/278 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN I+V + FL T D +L + ++T + + + S + D I Sbjct: 27 SNWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCETVMVTSTARTI-DLVSSYVLNDAVI 85 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVII-EIQPI--------------------------- 97 L + S+R+ L+ L Y + V + +I Sbjct: 86 LLVSSSRREFLLQWLDRYIFFADKVQLTDITDETATLSIIGPGSDAVVEKLGAGEIIGQP 145 Query: 98 --------NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 GVV + + I V + + + + + LRI Sbjct: 146 HGNHITIDGGVVAAVGSGLASPGYTLILPVSQKQQV--WQQILDSGAVELSDRAWDTLRI 203 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P+ + P + + IS +KGCYIGQE ++R+ +++ I Sbjct: 204 LQGRPAPDAELT-DDYNPLEVGLWQT--ISFSKGCYIGQETIARLNTYKGVKQHLWGIRL 260 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243 G I D ++G L G LA R Sbjct: 261 NAP-AEIGDSINIGDEKVGKLTSYTETPDGYFGLAYIR 297 >gi|239930421|ref|ZP_04687374.1| hypothetical protein SghaA1_19516 [Streptomyces ghanaensis ATCC 14672] gi|291438779|ref|ZP_06578169.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291341674|gb|EFE68630.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 321 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + + Sbjct: 42 VDLSHRGVVTVTGPERLGWLHLLLTQHVSELPPHQATEALILSAHGHIEHALYLV-DDGE 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ +++LI L K V + + + V+ + E Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTADIAVVHLPAGSIAEVPEGVVVRETPY 160 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + + I + LR+ + PH+ + Sbjct: 161 GRDLFLPRADLESYAGKAGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGGA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LP G+ I D IG Sbjct: 219 VHLQKGCYRGQETVARVQNLGRPPRRLVFLHLDGSEVHLPTPGTEIRLADDGPDGRRIGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 279 VTTSARHHELGPVALALIKRNVPVDARLIAGETAAAQETIVEP 321 >gi|256824240|ref|YP_003148200.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547] gi|256687633|gb|ACV05435.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547] Length = 386 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 97/300 (32%), Gaps = 45/300 (15%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V L ++ + V G + +L +++T V L + + +LTPQG+I + Sbjct: 71 LAVVDLGDRGVVTVSGPDRLSWLHSLLTQQVGDLAPGQSAEAMVLTPQGRIEHVLHLV-D 129 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---FID 117 + T + D L L + V + + + V+ ++D Sbjct: 130 DGATTWITTDPGHAAPLSSFLESMRFMLRVEVADRSADLRVVGEPHSAPGLPGEPPVWVD 189 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTY-------------------------HELRINHG 152 RT E + + LRI Sbjct: 190 PWPGPVGATAVRTADDLEVHPGEGWAWREVVLPAEAVEEWVADRPLAGWWALEALRIAAW 249 Query: 153 IVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + PH+ +D L + L KGCY GQE V+R+Q+ +R + + Sbjct: 250 RPSAQE--VDDRSIPHE--LDWLRTAVHLQKGCYRGQETVARVQNLGQPPRRLVFLHLDG 305 Query: 212 ---DLPPSGSPILTD--------DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 +LP GS + + +G L V L + V + LT+ Sbjct: 306 SGHELPAVGSEVHSGAVAGDPASGKVVGRLTSVGRHHELGPIGLAVVKRSAPAEETLTIG 365 >gi|325964194|ref|YP_004242100.1| glycine cleavage system protein T (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] gi|323470281|gb|ADX73966.1| glycine cleavage system T protein (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] Length = 361 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 38/278 (13%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ V LS++ + V G + +L + + V L + +L+ QG+I + Sbjct: 41 IAVVDLSSRGVVTVTGPDRLSWLNTLSSQQVAGLQPGQSSELLLLSVQGRIDFDARVIDD 100 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER 119 T+++ ++ ++ L + L K V I ++ VV + +S+ ++ Sbjct: 101 GGTTWLI-VEAAEAAPLAEFLNRMKFMLRVEIADVSADWAVVGTTKAVPEWSDLLVWEDP 159 Query: 120 FSIADVLLH--------------RTWGH------------NEKIASDIKTYHELRINHGI 153 + + R W E+ + LR+ Sbjct: 160 WPHVGAGGYSYATVPEASHPGLERPWFEYLVPAAELVQRVAERPLAGTLAAEALRVAAWR 219 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 + PH+ + L + L KGCY GQE +SR+ + +R + + Sbjct: 220 PRIGAE-TDDKTIPHELDL-LRTAVHLAKGCYKGQETISRVHNLGHPPRRLVFLQLDGSQ 277 Query: 213 --LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 LP +GSP+L + ++GT+ V G ALA+ + Sbjct: 278 HTLPQAGSPVLLGERKVGTVTSVAQHYEMGPVALAVIK 315 >gi|251771531|gb|EES52108.1| putative aminomethyltransferase [Leptospirillum ferrodiazotrophum] Length = 339 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 97/298 (32%), Gaps = 59/298 (19%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67 + + V G FLQ ++ DV R L+P+ +IL I + D +L Sbjct: 23 RVLVSVSGDDRASFLQGLLCQDVAGQKTGTLRYGFFLSPKARILFDSWIGVLP-DRILLS 81 Query: 68 --EIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIA 123 + ++ + L Y R+ + + + S + ++ + D Sbjct: 82 PSLFSKEDEEAFLAHLKKYLFFRTKATLSSETGAFISASLVGPEALALATPLFDPEAEEE 141 Query: 124 DVL----------------------------------LHRTWGHNEKIAS------DIKT 143 V R G E++ S D Sbjct: 142 GVRRLSEGGFAFLRPGIGAFDADTGGWIDLWLPAEKAGDRLKGLEERVLSRGGQRLDDTG 201 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R+ GI + + FP +A +D L +S KGCY+GQE V+R++ + + ++ Sbjct: 202 IEVYRVERGIPAVPFEL-NESHFPAEAGLDTL-AVSYNKGCYVGQEPVTRLKFQGQLSRK 259 Query: 204 PMIITGTDDLP-----PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 + I P D+ E GTL +V G LA + D Sbjct: 260 LVGIRLDGPFVSEVTLPRHLLASNDNTEAGTLTSLVSSVVCGGPVGLAYVKRGHWDSG 317 >gi|291303154|ref|YP_003514432.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728] gi|290572374|gb|ADD45339.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728] Length = 344 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 102/284 (35%), Gaps = 51/284 (17%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ + + G + +L +I T + L + +L+P G I + + + D L Sbjct: 44 DRDLLVLSGPERLSWLHSITTQHLTELGDEQGTELLVLSPNGHIEHHAAVFSLG-DKLWL 102 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN------------SSF 115 + + +L D L + + V IE + + +LS + + Sbjct: 103 DTAPGQGAALRDFLAKMRFFAQVEIE-EVTDFALLSVTGPSDLAEPDTLEIPDAKFAAGS 161 Query: 116 IDERF-----------------------SIADVLLHR-----TWGHNEKIASDIKTYHEL 147 + R D+L+ R T + Y L Sbjct: 162 VPPRPSSIFAGRARPDGGWERRTDTVGRPTVDILVPRDQLDETIAALGLPLAGTWAYDTL 221 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM 205 RI G+ D PH+ + L+ + L KGCY GQE V+R+ + + + Sbjct: 222 RIPQGLPAFGVD-TDHRTIPHEVVSLLVTAVHLDKGCYRGQETVARVHNLGKPPRATSIL 280 Query: 206 IITGTDDLPP-SGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 + GT++ PP G ++ D +G +G G ALA+ R Sbjct: 281 HLDGTEEQPPKPGDEVMLDGRAVGRVGTAGRHYEDGMIALALLR 324 >gi|291566614|dbj|BAI88886.1| glycine cleavage system T protein [Arthrospira platensis NIES-39] Length = 349 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 104/302 (34%), Gaps = 51/302 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ + FL T + + +T + + + + E+ + Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFVTSTARNI-DLATAYMTEEAVL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS-------------- 111 L + ++R L+ L Y V ++ V S + S Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLIGPESSSLLTKLGATIPDNFT 164 Query: 112 -NSSFIDE------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148 + ++D+ R ++ L L + + + + +LR Sbjct: 165 LGNHWVDQVANTSLRVAVGSGLATEGYTLIIPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G P+ + P +A + IS KGCYIGQE ++R+ +++R + Sbjct: 225 ILQGRPAPDRELT-EDYNPLEAGL--WGDISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + G+ I +D ++G L + G L R A G+ +++ + Sbjct: 282 LSG-FVEPGTVINVNDEKVGKLTSITETQEGWFGLGYIRT----KAGGAGLQVSLGDITA 336 Query: 265 KA 266 Sbjct: 337 TV 338 >gi|320009449|gb|ADW04299.1| folate-binding protein YgfZ [Streptomyces flavogriseus ATCC 33331] Length = 321 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 100/284 (35%), Gaps = 23/284 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS++ + V G + +L ++T V L A + IL+ G I + + Sbjct: 41 LVDLSHRGVVTVTGDDRLAWLHLLLTQHVSDLAPNQATEALILSANGHIEHALYLV-DDG 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERF 120 T + + + L+ L K V + + + V+ + + E Sbjct: 100 TTVWMHAEPGTQGDLVAYLESMKFFYRVEVADRTEDFAVVHLPAGSIAEVPDGVAVRETA 159 Query: 121 SIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D+ L R + + I Y LR+ + PH+ + + Sbjct: 160 HGRDLFLPRADLEPYAAAHGPVAGILAYEALRVEAYRPRLGFE-TDHRTIPHELGW-IGS 217 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228 + L KGCY GQE V+R+ + +R + + LP G+P+ + ++G Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLG 277 Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 278 FVTTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321 >gi|283779736|ref|YP_003370491.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068] gi|283438189|gb|ADB16631.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068] Length = 327 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 107/312 (34%), Gaps = 55/312 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+++ I+V G + FL TAD+ L + QGK + + + E Sbjct: 23 ADLSSRTRIRVTGSDRVGFLHGFCTADIKKLSPLAGCEAFFTNHQGKAVGHGYLYSR-EQ 81 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSF--IDER 119 + I++ + + L + L + + +V E Q ++L+ F + Sbjct: 82 SLIIDTTAGQFEKLSEHLRRFAITEDVEFADETQSTCELLLAGPTAPATIEQLFKVVAPT 141 Query: 120 FSIADVLLHRTWGHNEKIASDI---KTY-----------------------------HEL 147 + V + E + +D+ Y L Sbjct: 142 ERLESVRASSSEMSLEIVKTDLIPETAYLLLAPTASKQILLDLLTTAGVTLASGELIEAL 201 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI + + P + D L IS KGCY+GQE V+RI + + + Sbjct: 202 RIEGKTPAYGLEI-DESTLPQEMNRDTL-AISFKKGCYLGQETVARIDALGHVNRVLTKL 259 Query: 208 TGTDD-LPPSGSPI-----LTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGM 255 + + PP+G+P+ + ++G++ + ALA+ R K G Sbjct: 260 SLPGEIAPPTGTPLVMRDETGTEKQVGSIASIAYSPATKQLTALAVLR----RSGAKTGT 315 Query: 256 ALTVHGVRVKAS 267 LT S Sbjct: 316 QLTASNAAAVVS 327 >gi|284051077|ref|ZP_06381287.1| glycine cleavage T protein (aminomethyl transferase) [Arthrospira platensis str. Paraca] Length = 349 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 104/302 (34%), Gaps = 51/302 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ + FL T + + +T + + + + E+ + Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFVTSTARNI-DLATAYMTEEAVL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQ---------------EHTF 110 L + ++R L+ L Y V ++ V S +H Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLIGPESSSLLTKLGATIADHLT 164 Query: 111 SNSSFIDE------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148 + ++D+ R ++ L L + + + + +LR Sbjct: 165 LGNHWVDQVANTSLRVAVGSGLATEGYTLIIPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G P+ + P +A + IS KGCYIGQE ++R+ +++R + Sbjct: 225 ILQGRPAPDRELT-EDYNPLEAGL--WGDISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + G+ I +D ++G L + G L R A G+ +++ + Sbjct: 282 LSG-FVEPGTVINVNDEKVGKLTSITETQEGWFGLGYIRT----KAGGAGLQVSLGDITA 336 Query: 265 KA 266 Sbjct: 337 TV 338 >gi|322499496|emb|CBZ34569.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 391 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 25/177 (14%) Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 + + ++ TW S Y L + GI + F + P + +D L G Sbjct: 205 PSWFLRRCVVPATWA---PPFSSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKG 261 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD----------- 224 +S KGCY+GQE+ R + RKR + + PP+ I + Sbjct: 262 VSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVG 321 Query: 225 --------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272 +IG + V G+ + + R+ VD A + L + G V++ P W+ Sbjct: 322 EPLYSAAKEKIGEVTGVCGQVGIGLFRLRYVDKATRTVPGLQLKDGTPVQSHLPDWW 378 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 13/163 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 L ++ ++V G A FLQ I T D+ L + L G++L + Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + + ++++ L D L K+R V I+ VVL+ E TF+++ + Sbjct: 69 HEGQASILVDVHERSAAGLFDHLTEMKMRKKVHIDDVGKELVVLA-TLEETFADAQRSSD 127 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 S D + + + R DP D L Sbjct: 128 SASGCDARASSVTPLSPETLEE-------RHTECFPDPRNDAL 163 >gi|146078890|ref|XP_001463632.1| hypothetical protein [Leishmania infantum JPCM5] gi|321399563|emb|CBZ08750.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 390 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 25/177 (14%) Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 + + ++ TW S Y L + GI + F + P + +D L G Sbjct: 204 PSWFLRRCVVPATWA---PPFSSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKG 260 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD----------- 224 +S KGCY+GQE+ R + RKR + + PP+ I + Sbjct: 261 VSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVG 320 Query: 225 --------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272 +IG + V G+ + + R+ VD A + L + G V++ P W+ Sbjct: 321 EPLYSAAKEKIGEVTGVCGQVGIGLFRLRYVDKATRTVPGLQLQDGTPVQSHLPDWW 377 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 13/163 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 L ++ ++V G A FLQ I T D+ L + L G++L + Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + + ++++ L D L K+R V I+ VVL+ E TF+++ + Sbjct: 69 HEGQASILVDVHERSAAGLFDHLTEMKMRKKVHIDDVGKELVVLA-TLEETFADAQRSSD 127 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 S D + + + R DP D L Sbjct: 128 SASGCDARASSVTPLSPETLEE-------RHTECFPDPRNDAL 163 >gi|256371884|ref|YP_003109708.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331] gi|256008468|gb|ACU54035.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331] Length = 274 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 21/232 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 ++V G+ A +LQ ++ DV TL S +L G ++ + + ++ +D F L + Sbjct: 29 VQVTGRDAARYLQGQLSQDVSTLKADGQGAISVLLGVDGHLVTWLRVRRLADDAFWLVVA 88 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + + + +L +++R+ IE+ P + L +D+ D Sbjct: 89 EAHGERVRQRLEHFRIRTQATIELLPGH---LHVRPPEGLEPLWPLDQDAPFVDA----- 140 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 +D+ +H R+ G DP +D + + H + +S TKGCY GQE+ Sbjct: 141 -------PADLARFHAERLVAGAFDPASDLVDG-LLAHGVPTLVERAVSFTKGCYTGQEL 192 Query: 191 VSRIQHRNIIRK-RPMIITGTDDLP-PSGSPILTDDIEIGTLGV--VVGKKA 238 V+R R + + + + G+ ++ ++ G + VVG + Sbjct: 193 VARTSSRGAPAPIGLVALELAEPIAVAPGTALVVGGVDAGAITSAAVVGDRG 244 >gi|300742104|ref|ZP_07072125.1| folate-binding protein YgfZ [Rothia dentocariosa M567] gi|300381289|gb|EFJ77851.1| folate-binding protein YgfZ [Rothia dentocariosa M567] Length = 402 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 98/281 (34%), Gaps = 47/281 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G +L ++ + + + +R +L+PQG+I Y + + Sbjct: 68 SSLGIVRVSGPDRASWLTSLASQILTDMNPGDSREFLLLSPQGRIE-YAPAAVEDGQALW 126 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------FI 116 L ++ ++ + L D L K V IE + V+ + + + Sbjct: 127 LIVEGAQAEPLTDYLNRMKFMLRVDIENMSGDYAVIETARNPRGEQGAIHPVFADAPIWR 186 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTY------------------------HELRINHG 152 D ++ + H + + +D + Y LRI Sbjct: 187 DPWTALVEGGYHYSATPDAHPGTDYERYLSIIPRDKLTTLTESAQLAGVWAAEALRIEAW 246 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 T+ + P + + KGCY GQE V+R+ + +R + + Sbjct: 247 RPRAGTEI-DNKTIPQELDYTRT-AVHFEKGCYKGQETVARVHNLGRPPRRLVFLDLDGS 304 Query: 213 ---LPPSGSPILTDDIE--IGTLGVV-----VGKKALAIAR 243 LP +GS + + +G + V G ALA+ + Sbjct: 305 EHTLPAAGSELFVESKPRAVGRITSVALHHEAGPIALAVIK 345 >gi|50955392|ref|YP_062680.1| hypothetical protein Lxx18340 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951874|gb|AAT89575.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 370 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 113/306 (36%), Gaps = 44/306 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS++S + + G + +L + + + L + + +L G+++ + + + Sbjct: 39 AIVDLSDRSVLSIAGPDRLSWLHTLTSQSLTGLRPGESSETLLLDATGRLVYAVRLIE-D 97 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------IQPINGVVLS 103 +T L +DR + + L+ L + V + + NG L Sbjct: 98 GETLWLLVDRPEAEGLLGWLDSMRFLLRVEVADRTAAFATIGTLGEPPLPVAAPNGAPLV 157 Query: 104 WNQE--------HTFSNSSFIDERFSIADVLLHRTW--------GHNEKIASDIKTYHEL 147 W+ H ++ +S ++ L+ R G E + L Sbjct: 158 WHDPWHAVTPGGHQYARGDHPGVGWSWSERLVPRDALASIASRAGSGELTVAGTLAADAL 217 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI T+ PH+ +D L + L+KGCY GQE V+++ + +R ++ Sbjct: 218 RIAAWRPRFATE-ADERTIPHE--LDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRLVM 274 Query: 207 ITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH--G 261 + P G+ + D +GT+ + L + V A LTV G Sbjct: 275 LHLDGSEGVHPARGAEVSLDGKPVGTVTLSALHYELGPIALAVVKRATPAAATLTVDALG 334 Query: 262 VRVKAS 267 V A+ Sbjct: 335 TPVPAA 340 >gi|45185401|ref|NP_983118.1| ABR170Wp [Ashbya gossypii ATCC 10895] gi|74695271|sp|Q75D53|CAF17_ASHGO RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|44981090|gb|AAS50942.1| ABR170Wp [Ashbya gossypii ATCC 10895] Length = 462 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 64/420 (15%), Positives = 118/420 (28%), Gaps = 158/420 (37%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA----------------DVLTLPYKIA------- 39 S L ++FI V G A+ FL +ITA DV + + Sbjct: 29 SCRLPGKAFISVRGPDAVKFLNGLITAKLAPEVVKKSLTTVNPDVREVERHPSISGFDLR 88 Query: 40 ----------------------RGSAILTPQGKILLYFLISKIE---EDT-------FIL 67 SA L +GK+L ++ D ++L Sbjct: 89 RGNWGIYKEGTRARGPYISRFGTYSAFLNSKGKVLTDTVVYPAPLGLPDGAAAKYPEYLL 148 Query: 68 EIDRSKRDSLIDKLLFYKL-------RSN------VIIE--IQPINGVVLSW-------- 104 + D + L L +KL R + V I+ P SW Sbjct: 149 QCDAIFVEPLEHLLQRHKLLQRVKIARRDDLSVWHVAIDMDAYPEWEQSFSWRSEFWKPM 208 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTW---------------------------- 131 + FI + F+ A+ L + Sbjct: 209 VSLHNQDDALRFARWFIAQFFAGAEGRLVGAYYDTRNVDPTKKSNIFYMVTTGDVDDIAT 268 Query: 132 --------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTK 182 ++ R+ G+++ ++ + P + D + +S K Sbjct: 269 LFSPQMVSSKTTAVSVPYTEVRRARLRRGVLEGVSELRSEAVLPLEVNFDLYEDAVSFDK 328 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMII--------------------------TGTDDLPPS 216 GCY+GQE+ +R ++RKR + + P+ Sbjct: 329 GCYVGQELTARTHATGVLRKRCAPVIVSNSASLDTLATSSRLDLYTDYVIPAASTSPSPT 388 Query: 217 GSPILTDD------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 SP + + IG L V G +A+ ++ ++ + + + + P Sbjct: 389 NSPFASQNPRPRKKQPIGKLLCVDGTDGVALVKLIYIERSR------SCGSIECYVTHPE 442 >gi|239996335|ref|ZP_04716859.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas macleodii ATCC 27126] Length = 348 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 57/291 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LSN I + G+ A +LQ IT ++ L AR A +GK +++ + + Sbjct: 16 VKLSNAMIISLEGEQADSYLQGQITVNINKLTENTARHFAHCDNKGKTWSTGYVTRHQ-N 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--------------------EIQPINGVVLS 103 +L + + +L Y + S V I E++ + S Sbjct: 75 KLLLVTNEDAGSHSLAQLNKYGVFSKVDILDDTRTYSAYFISLDAVKTNEVKAALSQLFS 134 Query: 104 WNQEHTFSNSSFID----------------ERFSIADVLLHRTWGHNEKIASDIKT---- 143 N+ S D S +++ ++I S I+ Sbjct: 135 ENEVERLLESDTPDNGSLEKVESEHGVAYFANTSCKGIIVLLDDNGAKQINSLIEAQTLS 194 Query: 144 ------YHELRIN--HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + ++I H +V + + P + LNGI KGCY+GQEVV+R + Sbjct: 195 CYPQTVFDAIQIQSVHALVQGDA---VAEYVPQMINVQALNGIDFDKGCYMGQEVVARTR 251 Query: 196 HRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 ++ ++ G + + ++G + GK L +A +D Sbjct: 252 FLGKNKRAAYSFKLEGNVNIKPGDAL---EKQLGENWRIAGKI-LNVASLD 298 >gi|163848163|ref|YP_001636207.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl] gi|222526066|ref|YP_002570537.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl] gi|163669452|gb|ABY35818.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl] gi|222449945|gb|ACM54211.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl] Length = 329 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 88/278 (31%), Gaps = 45/278 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G+ L + T + L +A+ TP G+++ + + D + Sbjct: 22 SDRGRLWMRGRDRAALLHRLSTNHIERLQPGQGTLTALTTPIGRMIDLLRVYALP-DALL 80 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPIN----GVVLSWNQEHTFSNSSFID---- 117 LE +++ L V + GV + + +D Sbjct: 81 LETGDGHGPAILRHLRKNIFFNDQVTVADASAELGQIGVYGPQASQVIQTIGLSVDLPLH 140 Query: 118 --------------ERFSIADVLLHRTWGHN-------------EKIASDIKTYHELRIN 150 R + + + D T +RI Sbjct: 141 SIATGDWNGHQVLVARCEPLGGDGYTLYPPATQTTTLLTALTDEGAVPLDSHTAEVVRIE 200 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 HG + P +A DL +S KGCY+GQE+++R++ R I K + + Sbjct: 201 HGYPRFKHEITLD-YIPLEA--DLWRAVSFQKGCYVGQEIIARMESRGRIAKLLCGLRLS 257 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 + + D E GTL G LA R Sbjct: 258 AAPEAVPAAVTVDGKEAGTLTSAAYSPRYGWIGLAYVR 295 >gi|108803026|ref|YP_642963.1| glycine cleavage T protein [Rubrobacter xylanophilus DSM 9941] gi|108764269|gb|ABG03151.1| glycine cleavage T protein (aminomethyl transferase) [Rubrobacter xylanophilus DSM 9941] Length = 309 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 42/289 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G+ + L+AI+T + + +L P+G+I + + + ++ + Sbjct: 29 LRLSGRDPLGLLEAILTNSLPG-EEDRGAYALLLDPKGRIQADLRVVRHAGEVLVVAGPQ 87 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 S R ++ + L Y S V +E + G+ E S+ + + LL Sbjct: 88 SAR-AVREILRRYAPFSRVAVEETGFGVLGLYGPRAAELAGLRSALPEHACARLGALLAV 146 Query: 130 TWGHNEKIASDIKTYHEL-----------------------RINHGIVDPNTDFLPSTIF 166 I EL RI G+ TDF P F Sbjct: 147 GVAVPVPGVDLIGAPEELQRARERLRSAGAVAATEEEYEAARIAAGVPRFGTDFTPEN-F 205 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR---KRPMIITGTDDLPPSGSPILTD 223 P +A + L +S KGCY GQE V+R+++R +R ++ +GT PP+ IL Sbjct: 206 PAEAGL-LERAVSFEKGCYPGQETVARMRYRGHPNRTLRRLLVASGTPPAPPA--EILQG 262 Query: 224 DIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 D GTL V A+ + + L+ G ++ + Sbjct: 263 DRRAGTLTSVSPLPSEEGVVFALGYLRR---GADPEGPLSAGGAILRVA 308 >gi|21222578|ref|NP_628357.1| hypothetical protein SCO4181 [Streptomyces coelicolor A3(2)] gi|256786350|ref|ZP_05524781.1| hypothetical protein SlivT_17794 [Streptomyces lividans TK24] gi|289770240|ref|ZP_06529618.1| glycine cleavage T protein [Streptomyces lividans TK24] gi|8388730|emb|CAB94085.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|289700439|gb|EFD67868.1| glycine cleavage T protein [Streptomyces lividans TK24] Length = 321 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 106/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + IL+ G I + + Sbjct: 42 VDLSHRGVLAVTGDDRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLV-DDGT 100 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T ++ +++LI L K V + + + ++ S+ + E Sbjct: 101 TVWAHVEPGSQEALIAYLESMKFFYRVEVADRTADTALVHLPAGSIAQAPASAVVRETPY 160 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 D+ L R + A+ I + LR+ + PH+ + Sbjct: 161 GRDLFLPREELEAFAAQAGPAAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGTA 218 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+Q+ +R + + LPP+G+ I D +IG Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPNGAEIRLADDGPDGRKIGF 278 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + V+ Sbjct: 279 VTTSVRHHELGPVALALVKRNVPVDARLMAEETAAAQETVVEP 321 >gi|163839721|ref|YP_001624126.1| glycine cleavage system T protein (aminomethyltransferase) [Renibacterium salmoninarum ATCC 33209] gi|162953197|gb|ABY22712.1| glycine cleavage system T protein (aminomethyltransferase) [Renibacterium salmoninarum ATCC 33209] Length = 361 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 29/279 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + + V G+ + +L + + DV L + +L+ QG+I + E ++ Sbjct: 52 SQRGVVTVSGQDRLTWLTTLSSQDVSRLKAGDSAELLLLSVQGRIEYDIHVLDDGETAWL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLS----------WNQEHT------ 109 L ++ ++ L L K V + E+ GV+ S W Sbjct: 112 L-VEAAEASPLAAWLNSMKFMLRVEVNEVSEEWGVLASTAALLDGQPVWQDPWPGVVPGG 170 Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + F + T E + LRI + Sbjct: 171 FAYSSQEGHPGVDRPWFEYLVPIEKLTELIAELPLAGSLAAEALRIAAWRPRWGAE-TDE 229 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220 PH+ + + + L+KGCY GQE V+R+ + +R + + LP GS I Sbjct: 230 KTIPHELDL-MRTAVHLSKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTLPVVGSAI 288 Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 + ++G L V + + + LTV Sbjct: 289 QNGERQVGLLTSVAQHYEMGPIGLAVIKRNTDANAELTV 327 >gi|167738163|ref|ZP_02410937.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 14] gi|167815349|ref|ZP_02447029.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 91] Length = 170 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFD 151 >gi|311112022|ref|YP_003983244.1| folate-binding protein YgfZ [Rothia dentocariosa ATCC 17931] gi|310943516|gb|ADP39810.1| folate-binding protein YgfZ [Rothia dentocariosa ATCC 17931] Length = 402 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 47/281 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G +L ++ + + + +R +L+PQG+I Y + + Sbjct: 68 SSLGVVRVSGPDRASWLTSLASQILTDMNPGDSREFLLLSPQGRIE-YAPATVEDGQALW 126 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------FI 116 L ++ ++ + L D L K V IE + V+ + + + Sbjct: 127 LIVEGAQAEPLTDYLNRMKFMLRVDIENMSGDYAVIETARNPRGEQGAIHPSFADALIWR 186 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTY------------------------HELRINHG 152 D ++ + H + + D + Y LRI Sbjct: 187 DPWTALVEGGYHYSATPDAHPGIDYERYLSIIPREKLATLTEGAQLAGVWAAEALRIEAW 246 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 T+ + P + + KGCY GQE V+R+ + +R + + Sbjct: 247 RPRAGTEI-DNKTIPQELDYTRT-AVHFEKGCYKGQETVARVHNLGHPPRRLVFLDLDGS 304 Query: 213 ---LPPSGSPILTDDIE--IGTLGVV-----VGKKALAIAR 243 LP +GS + + +G + V G ALA+ + Sbjct: 305 EHTLPAAGSELFVEGKPRAVGRITSVALHHEAGPIALAVIK 345 >gi|314928680|gb|EFS92511.1| folate-binding protein YgfZ [Propionibacterium acnes HL044PA1] Length = 313 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ LSN+ + V G + ++ ++ + + + S +L+P G + L + Sbjct: 35 SIELSNREVLAVSGVDRLGWVHSLTSQFLDDIEPGRTTTSLVLSPTGHVKH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L + V +E++P + + S +D + Sbjct: 94 QTFWAWTEPGRGACLAAWLDSMRFMMRVDVELRPDM-TIRWVGHDVAVSEGVVLDSEVAG 152 Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 +L + + + + LRI G+ D P++ + G L Sbjct: 153 GREVILPDDSVAFSAVEPVGVLAWEALRIAAGVPRIGLD-TDDRTIPNEIGL---YGTHL 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVHNLGRPPRRLTLLQLDGSRAELPEVGAEIHAGGRRVGAMGSSANHY 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGITA 295 >gi|167619727|ref|ZP_02388358.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis Bt4] Length = 177 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 1/112 (0%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFD 151 >gi|315101738|gb|EFT73714.1| folate-binding protein YgfZ [Propionibacterium acnes HL046PA1] Length = 313 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 99/272 (36%), Gaps = 21/272 (7%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 SV LSN+ + + G + +L + + + + S +L+P G + L + Sbjct: 35 SVELSNREVLAISGVDRLGWLHSFTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 TF + + L L V + ++P V + + S+ +D + Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMCFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152 Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 ++ A + + LRI GI D P++ + G + Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE V+R+ + +R ++ +LP G+ I +G +G Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G LA+ R + G+ L V G+ Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295 >gi|219848165|ref|YP_002462598.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485] gi|219542424|gb|ACL24162.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485] Length = 322 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 94/297 (31%), Gaps = 45/297 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G+ L + T + L + + TP G+++ + + D + Sbjct: 22 SDRGRLWMRGRDRASLLHRLSTNHIARLQPGQGTLTVLTTPIGRMIDLLRVYALP-DALL 80 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPIN------------GVVLSWNQEHTFSNS 113 LE ++ L V + +V + Sbjct: 81 LETGPRHGGPILRHLRKNIFFNDQVTVADAGSELGQIGIYGPQAGEIVQALGLPMVAERY 140 Query: 114 SFIDERFSIADVLLHR-----------------------TWGHNEKIASDIKTYHELRIN 150 + ++ VL+ R + +T +RI Sbjct: 141 GIVAAQWGETPVLIARCEPLGGDGYTLYPPVAQTEALLAALVAAGAAPLNAETAEVVRIE 200 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 HG + P +A DL +S KGCY+GQE+++R++ R I K+ + T Sbjct: 201 HGYPRFGHEITLD-YIPLEA--DLWRAVSFQKGCYVGQEIIARMESRGRIAKQLRGLRLT 257 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGV 262 +P+ D E+G L G LA R D +A V V Sbjct: 258 ALPTIVPTPLTVDGKEVGVLTSAAHSPRYGLIGLAYVRSSYADDGTTVLVADQVANV 314 >gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] Length = 376 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 54/301 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L +I+ V LP + +L G+I + +++ ++ T Sbjct: 49 SHREIITVTGEDRLSWLHLVISQHVTELPEGEGTEALVLDSHGRIDAHMVLAYVDG-TVY 107 Query: 67 LEID-----------RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L+ D ++ L+D K S V I +L+ + S Sbjct: 108 LDTDPGAQATTALPKGGEKQPLLDYFEAMKFWSKVDIRDATDEWALLTLLGPEVSTMLSR 167 Query: 116 ID-----------------------ERFSIADVLLHRT--------WGHNEKIASDIKTY 144 D S D+L+ R+ + + Sbjct: 168 FDIELDTRPYAVTRFSGGIARRMPWPGPSSVDLLIPRSELVDWWTKLTDAGARPAGTWAF 227 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ D PH+ + + + KGCY GQE V+++ + + Sbjct: 228 DALRVESLRPKLGVD-TDERTIPHEVNW-IGSAAHVAKGCYRGQETVAKVHNVGKPPRNM 285 Query: 205 MIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGM 255 +++ P +G P+L D +G +G V G ALA+ R D + G Sbjct: 286 VLLHLDGSQEIYPETGDPVLRGDRTVGRVGSVAQHHELGPIALALLKRSTPADAELLAGT 345 Query: 256 A 256 Sbjct: 346 E 346 >gi|332711903|ref|ZP_08431833.1| folate-binding protein YgfZ [Lyngbya majuscula 3L] gi|332349231|gb|EGJ28841.1| folate-binding protein YgfZ [Lyngbya majuscula 3L] Length = 355 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 96/285 (33%), Gaps = 45/285 (15%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + IKV G + +L T D T + +T + + + I D+ +L Sbjct: 50 HWGLIKVSGDDRLRYLHNQSTNDFQTRRPGQGCETVFVTSTARTI-DLATAYILADSVLL 108 Query: 68 EIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSW---------------------- 104 + + R +++ L Y V ++ + VLS Sbjct: 109 LVSPNCRQQIMEWLDRYIFPMDQVALQDVSDHHAVLSLIGPVSDALLTGLGVEISGEDAS 168 Query: 105 --------NQEHTFSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRINH 151 NQ S +++ + +T I + + +LRI Sbjct: 169 HQQLMLGDNQVRIAVGSCLAMPGYTVICPAENAAQVWQTLTTAGAIPIGDRVWEQLRIQQ 228 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G P + P +A + IS +KGCYIGQE ++R+ +++R I + Sbjct: 229 GRPAPGHELT-EDYNPLEAGL--WQSISFSKGCYIGQETIARLNTYKGVKQRLWGIRLSA 285 Query: 212 DLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK 252 GS I D ++G L + G LA R +K Sbjct: 286 PT-DLGSVITVDGEKVGKLTSLTETDQGVFGLAYIRTKAGGAGLK 329 >gi|167719160|ref|ZP_02402396.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei DM98] Length = 200 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L + V G A FL +T DV L AR + +P+G++L FL + D Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFD 151 >gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium subsp. avium ATCC 25291] Length = 364 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 100/300 (33%), Gaps = 46/300 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G +L +I T V LP + + L QG++ I T Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 L+ + + L+D L S+V + V+ + + + ++ Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158 Query: 115 FIDERFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGI 153 + R + G E + + Y R+ Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVLPGGVWAYEAHRVAARR 218 Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262 G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V Sbjct: 278 GSVDRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337 >gi|152964852|ref|YP_001360636.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus radiotolerans SRS30216] gi|151359369|gb|ABS02372.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus radiotolerans SRS30216] Length = 360 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 96/283 (33%), Gaps = 47/283 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS++ +++ G + +L +I + + L ++ + +L+PQG++ + + D Sbjct: 49 ADLSHRGVLRLSGPDRLSWLHSITSQALTGLGAGVSTETLVLSPQGRVEHALHLV-DDGD 107 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-----------------WNQ 106 + ++ D+L L + V I VL W Sbjct: 108 ATWITVEPGSVDALRTWLERMRFALRVEIADVSAEFAVLGEPSRSAESSLGPVWVDPWPG 167 Query: 107 EHTFSNSSFIDERF--------------SIADVLLHRT---WGHNEKIASDIKTYHELRI 149 + D +VL+ R + + LR+ Sbjct: 168 ATPANEGGSADTASYSAVPTLEHPGTERPWREVLVPRAELVAAVAGRRLAGTWATEALRV 227 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + PH+ +D L + L KGCY GQE V+++ + +R ++ Sbjct: 228 EAWRPRLGLE-TDERSIPHE--LDWLRTAVHLHKGCYRGQETVAKVHNLGRPPRRLALLH 284 Query: 209 GTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 DLP G ++ D +G + G ALA+ + Sbjct: 285 LDGSSHDLPAHGDDVVHGDRRVGFVTTAARHHELGPVALAVLK 327 >gi|156743472|ref|YP_001433601.1| glycine cleavage T protein [Roseiflexus castenholzii DSM 13941] gi|156234800|gb|ABU59583.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus castenholzii DSM 13941] Length = 337 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 96/298 (32%), Gaps = 48/298 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ L + T D+ L +A+ TP G+I+ L +DT ++ Sbjct: 41 IFMRGRDRAALLHRLSTNDIERLNPGEGTLTALTTPIGRII-DLLTVHALDDTLLIVTSP 99 Query: 72 SKRDSLIDKLLFYKLR-SNVIIEIQP---INGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 + + L V +E V T + + + + Sbjct: 100 DQGPPVFGHLRRNIFFNDQVTLEPAGRTYTQVAVYGPQAARTLAELIGAEIHLPLHGITP 159 Query: 128 HRTWGHNEKIA---------------------------------SDIKTYHELRINHGIV 154 G + +A D +T LR+ G Sbjct: 160 ATLAGVSLLLARRKPIGGDSFTLYVPSDGADAVYAALLTAGAAALDAETLDVLRVEQGYG 219 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + P + + L+ +S TKGCY+GQE+++R++ R + KR + + + Sbjct: 220 AFGREL-SQEYIPLETGL--LDAVSFTKGCYVGQEIIARMESRGRLAKRLCGLRLSHPVV 276 Query: 215 PSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG-MALTVHGVRVKA 266 + + D + G L V G ALA R + G T G ++ Sbjct: 277 AP-AKLQVDGRDAGDLTSAVVSPRFGPIALAYVRTAYAEPGTVVGVDGFTATGRVIEL 333 >gi|320103031|ref|YP_004178622.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644] gi|319750313|gb|ADV62073.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644] Length = 388 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 95/307 (30%), Gaps = 68/307 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++++ I G L + T ++ L + TPQGK L + E D + Sbjct: 32 TDRTRIAFTGADRAKSLHNLTTQNITALKPGQGAEGFVTTPQGKTLALVTVHVDERDPIL 91 Query: 67 -LEIDRSKRDSLIDKLLFY-KL--------------------RSNVIIEIQPINGVVL-S 103 + D S+ Y L R+ I+E + S Sbjct: 92 WVRSDAGVAGSVSSHFSKYCALDETTWTDHSASTTEFLILGPRAEEILERVGLRSTAGGS 151 Query: 104 WNQEHTFSNSS-----------FIDERFSIADVLLH-----------------------R 129 W + + D S+ L+ R Sbjct: 152 WAELMASPEGAIRNATLEGLAEVADPALSLPPRLIRERFGAHHGVTILTGLREAVTIRSR 211 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 E LRI G+ D + P + D I+ TKGCY+GQE Sbjct: 212 LAERAECAPMPPAKLEALRIEIGLPRFGVDLT-ADHLPQEFDRDA-RAINFTKGCYLGQE 269 Query: 190 VVSRIQHRNIIRKRPMIITG---TDDLPPSGSPILTDDIEIGTLGVVV------GKKALA 240 V+R+ + K + LPPSG+ ++ DD +GTL V G L Sbjct: 270 TVARLDALGHVNKMLRHLKFHSVNAPLPPSGTTLMKDDRPVGTLTSVARLVDGSGVLGLG 329 Query: 241 IARIDKV 247 + RI + Sbjct: 330 MVRIKQA 336 >gi|307153085|ref|YP_003888469.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822] gi|306983313|gb|ADN15194.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822] Length = 357 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 103/305 (33%), Gaps = 50/305 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G + FL T ++ +L + + G+ L + + +++ Sbjct: 46 SHWGLIQLKGNERLRFLHNQTTNNINSLKPGQGCDTVFVNSTGRTL-DLATAYVTDESIY 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLS--WNQEHTFSNSSFIDE----- 118 L + ++R L+ + Y V +E + + Q H+ +D Sbjct: 105 LLVSPNRRQFLLQWMDRYIFPMDKVELEDSSGKYAIFTLIGPQSHSVLAKLNLDPLIGQP 164 Query: 119 --------------RFSIADVLLHRTWGHNEKIASDIKTYHEL----------------R 148 R ++ L + + + + +L R Sbjct: 165 LNTHIQQKIDNSLVRVALGSGLALPGYTLMVPMQEALTVWEQLVNTGVTLLGNRVWEQLR 224 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G P+ + ++ + IS KGCYIGQE ++R+ +++R + Sbjct: 225 ILQGRPVPDYELT-EDYNALESGL--WKAISFEKGCYIGQETIARLNTYKGVKQRLWGVK 281 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + + P + ++ +D ++G L G LA + ++ + + Sbjct: 282 LSQCVQP-HTEVILEDKKVGILTSCTETQEGAFGLAYVKTKAGGEGLRVTLGEQTGEL-- 338 Query: 265 KASFP 269 S P Sbjct: 339 -VSVP 342 >gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1] gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1] Length = 5299 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L ++ ++V G+ FLQ +++ D+ + A +A+LTPQGK L + ++ D Sbjct: 7 VRLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVYTALLTPQGKFLYDLFVVELG-D 65 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN 89 F+++ + ++ + L KL YKLRS Sbjct: 66 VFLIDAEAARIEELRKKLSMYKLRSK 91 >gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] Length = 364 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 102/300 (34%), Gaps = 46/300 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G +L +I T V LP + + L QG++ I T Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 L+ + + L+D L S+V + V+ + + + ++ Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158 Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASD--------------IKTYHELRINHGI 153 + R + G E A+D + Y R+ Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVRPGGVWAYEAHRVAARR 218 Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262 G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V Sbjct: 278 GSVDRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337 >gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M] gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 363 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 98/304 (32%), Gaps = 47/304 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + GK +L I T V LP + + L QG++ I T Sbjct: 39 SHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVE-DHWIQTELGATTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 L+ + + + L++ L + V + + + L Q Sbjct: 98 LDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLM 157 Query: 107 EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 F + R AD + I TY R+ Sbjct: 158 AVPLPGGGFARRMPSSAGQIELDLLVPRGDTAD--WKHRLTQAGVRPAGIWTYEAHRVAA 215 Query: 152 GIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 D PH+ + + L KGCY GQE V+R+ + + +++ Sbjct: 216 KRPRLGVD-TDERTIPHEVGWIGGPGIGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLH 274 Query: 209 --GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ D P +G +L +G +G VV L + V + AL +A Sbjct: 275 LDGSTDRPSTGDSVLAGGRSVGRVGTVVDHVDLGPVALALVKRGLPADTALMTG---AEA 331 Query: 267 SFPH 270 + P Sbjct: 332 TIPA 335 >gi|27904872|ref|NP_777998.1| hypothetical protein bbp391 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372575|sp|Q89AC3|YGFZ_BUCBP RecName: Full=tRNA-modifying protein ygfZ gi|27904270|gb|AAO27103.1| conserved hypothetical protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 318 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 32/249 (12%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + +L + SFI V GK +LQ IT ++ L + T GK+L + Sbjct: 16 IKLTFLKDWSFITVTGKDCFNYLQGQITYNLKLLKSNKHIICSHCTIDGKVLSILRLFMH 75 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGVVLSWNQEHTFSNSS 114 + + + +S I++L Y + S+V I + I G F N Sbjct: 76 NDGYAYI-LRKSTSKFQINELKKYSIFSHVNICQKKDIILLGIMGREARTKLLQIFKNIP 134 Query: 115 F-IDERFSIADVLLHRTWGHNEKIASDI--------------------KTYHELRINHGI 153 D + DV++ + +E+ I K + L I Sbjct: 135 HERDSVYQENDVIILKYDQPHERYLIIIKKHNLILNKILSLVDKIYHHKIWLALEIASNF 194 Query: 154 VDPNTDF-LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211 D+ + FP ++ LNG+ L KGCY GQE++++I + + + ++G Sbjct: 195 P--IIDYNINKKFFPQSLNLEKLNGLDLKKGCYYGQEMIAKIHFKKLNKHYLHWLSGYSY 252 Query: 212 DLPPSGSPI 220 +P G I Sbjct: 253 PIPKIGDNI 261 >gi|332141910|ref|YP_004427648.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas macleodii str. 'Deep ecotype'] gi|327551932|gb|AEA98650.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas macleodii str. 'Deep ecotype'] Length = 347 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 97/280 (34%), Gaps = 51/280 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS+ I + G+ A +L IT ++ L K AR A +GK +++ Sbjct: 16 VDLSDTMVISLEGEQADSYLHGQITVNINKLDDKSARHFAHCDNKGKTWSTGYVTR-HLS 74 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------------E 93 +L + + + +L Y + S V I + Sbjct: 75 KLLLVANNDAGNHSLAQLNKYGVFSKVDILDDTPNYSAYFLSLTAAKNSGVTSTLSKMFD 134 Query: 94 IQPINGVVLSWNQEH-----TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT----- 143 + + ++ + + ++ S S + + + + +++ ++ T Sbjct: 135 VTDLEALLDTQHGDNHALQKIESESGLLFTANTAQEGFVLLLNKGAQQLVEEVNTQSIPC 194 Query: 144 -----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 ++ ++I + + P + LNGI KGCY+GQEVV+R + Sbjct: 195 YPAVVFNAIQIKSVHAMLQKEAV-GEYIPQMINVQALNGIDFDKGCYMGQEVVARTRFLG 253 Query: 199 IIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKK 237 ++ + G + + ++G V GK Sbjct: 254 KNKRAAFSFKLEGKVDVTPGDAL---EKQLGENWRVAGKI 290 >gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 364 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 102/300 (34%), Gaps = 46/300 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G +L +I T V LP + + L QG++ I T Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 L+ + + L+D L S+V + V+ + + + ++ Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158 Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASD--------------IKTYHELRINHGI 153 + R + G E A+D + Y R+ Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVRPGGVWAYEAHRVASRR 218 Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 219 PRLGMD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262 G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V Sbjct: 278 GSADRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337 >gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_29246 [Mycobacterium kansasii ATCC 12478] Length = 363 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 96/295 (32%), Gaps = 46/295 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I + GK +L +I T V LP + + L QG++ I DT Sbjct: 39 SHRAVITLTGKDRQTWLHSISTQHVSDLPEGASTENLSLDGQGRVE-DHWIQTELADTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 L+ + + + L+ L + V E + V+ + S + Sbjct: 98 LDTEPWRGEPLLSYLRKMVFWAAVTPEAADLAVLSLLGPRLADRAVLDVVGLDALPSEMA 157 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDI------------------------KTYHELRIN 150 + + R +I D+ TY R+ Sbjct: 158 AVP---LAGGGFVRRMPAPAGQIELDLLVPREDCADWQHRLTQAGVRPAGVWTYEAHRVA 214 Query: 151 HGIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 D PH+ L + L KGCY GQE V+R+ + + +++ Sbjct: 215 ARRPRLGVD-TDERTIPHEVGWIGGPGLGAVHLDKGCYRGQETVARVHNLGKPPRMLVLL 273 Query: 208 T--GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 G+ D P +G ++ +G +G VV L + V + L Sbjct: 274 HLDGSGDRPSTGDAVMAGGRAVGRVGTVVEHVDLGPVALALVKRGLPADTELMTG 328 >gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium intracellulare ATCC 13950] Length = 364 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 90/292 (30%), Gaps = 40/292 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G +L +I T V LP + + L QG++ I T Sbjct: 40 SHRGVLTLTGNDRQTWLHSISTQHVSNLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 98 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 L+ + + L++ L S V ++ P Sbjct: 99 LDTEPWRAAPLLEYLRKMVFWSEVTPSDADLAVLSLLGPRLADQTILDALGVDALPAELS 158 Query: 101 VLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINHGI 153 + + T + S +D D R + + Y R+ Sbjct: 159 AVPLDGGFVRRMPGTPAGSVELDLVVPRGDAGDWRNRLSQAGVRPGGVWAYEAHRVAAVR 218 Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277 Query: 211 DDL--PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + P +G P+L +G LG VV L + + + L Sbjct: 278 GSVERPSTGDPVLAGGRAVGRLGTVVDHVDLGPIALALLKRGLPAETELATG 329 >gi|282860448|ref|ZP_06269514.1| folate-binding protein YgfZ [Streptomyces sp. ACTE] gi|282564184|gb|EFB69720.1| folate-binding protein YgfZ [Streptomyces sp. ACTE] Length = 321 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 98/284 (34%), Gaps = 23/284 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 V LS++ + V G + +L ++T V L A + IL+ G I + + Sbjct: 41 LVDLSHRGVVTVTGDDRLTWLHLLLTQHVSDLAPHQATEALILSANGHIEHALYLV-DDG 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERF 120 T ++ LI L K V + + + V+ + + E Sbjct: 100 TTVWAHVEPGTEGELIAYLESMKFFYRVEVADRTGDVAVVHLPAGSIAEVPDGVAVREMP 159 Query: 121 SIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D+ L R + A I Y LR+ + PH+ + Sbjct: 160 HGRDLFLPRADLEAYAAAHGPAVGILAYEALRVETHRPRLGFE-TDHRTIPHELGW-IGT 217 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228 + L KGCY GQE V+R+ + +R + + LP G+P+ + ++G Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGAEGRQLG 277 Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 278 FVTTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321 >gi|186686528|ref|YP_001869724.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc punctiforme PCC 73102] gi|186468980|gb|ACC84781.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc punctiforme PCC 73102] Length = 331 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 94/300 (31%), Gaps = 54/300 (18%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 IKV G + FL T + L + +T + + + + ED IL Sbjct: 29 WGRIKVAGDDRLNFLHNQSTNNFQILKPGQGCDTVFVTSTARTI-DLATAYVREDAVILL 87 Query: 69 IDRSKRDSLIDKLLFYKL-RSNVIIE---------------------------------- 93 + ++R L++ L Y V + Sbjct: 88 VSPNRRQYLMEWLDKYIFYADKVELSDITEYTNTFSLIGPGSDAVLEKLGIGELIGQPYG 147 Query: 94 ------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKTYHE 146 I P GV ++ +F F D + + + + Sbjct: 148 NHQVYTIAPAEGVRIAVGSGLAAPGYTFT---FPYTDKSSVWNKLLEAGAVEMSDRAWDA 204 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + P + + IS TKGCYIGQE ++R+ +++ + Sbjct: 205 LRILQGRPAPDAELT-DDYNPLEVGLWQT--ISFTKGCYIGQETIARLNTYKGVKQHLLG 261 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGV 262 I + + GS I D ++G L G L R +K + T V Sbjct: 262 IRLSAPV-EVGSAIAVGDEKVGKLTSYTETADGYFGLGYIRTKAGGVGLKVKVGETEGEV 320 >gi|282896179|ref|ZP_06304202.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis brookii D9] gi|281198868|gb|EFA73746.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis brookii D9] Length = 327 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 47/296 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G+ + FL T + +L + ++T + + + + ED + Sbjct: 27 SHWGRIEVTGEDRLRFLHNQSTNNFQSLQPGSGCDTVMVTSTARTI-DLVTGYVLEDRVL 85 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVII-EIQP---------------------------- 96 L + ++R+ L+ L Y V + +I Sbjct: 86 LLVSPNRREFLLSWLDRYIFFTDQVTLTDITDQTATFTLLGPESDTLISKLGAASLLSQP 145 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 ING++ + + I R + + + + + LRI+ Sbjct: 146 DGHHISINGIIFAVGTGLAIPGYTLILPRAEK--QQIWQQLLDWGAVKLSDRHWEMLRIS 203 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G P+ + P + + +S KGCYIGQE ++R+ +++ I Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQHLWGIKLK 260 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262 G+ I + ++G L + G L R + + T + Sbjct: 261 -SCAQPGTIITILEEKVGKLTSYIETPEGHFGLGYIRAKAGGVGLTVEVGETQGEI 315 >gi|12323347|gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana] Length = 436 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 101/317 (31%), Gaps = 70/317 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIE 61 V LS+ I+V G FL TA+ +L + +TP + + + I K Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 164 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111 + +L + + S+I+ L Y + V I+ + + + Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQLHYSYATVK 223 Query: 112 ------------------------------------NSSFIDERF-----SIADVLLHRT 130 S DE F V + +T Sbjct: 224 NMKQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKT 283 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 I + +LRI G P + +A + N ISL KGCY GQE Sbjct: 284 LLAEGAIPMGSVAWEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQET 340 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI 244 ++R+ + I++R + + GS I D ++G L G K L + Sbjct: 341 IARLMTYDGIKQRLCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK- 398 Query: 245 DKVDHAIKKGMALTVHG 261 A G +TV Sbjct: 399 ---KQAASIGNTVTVGE 412 >gi|239942377|ref|ZP_04694314.1| hypothetical protein SrosN15_15372 [Streptomyces roseosporus NRRL 15998] gi|239988842|ref|ZP_04709506.1| hypothetical protein SrosN1_16142 [Streptomyces roseosporus NRRL 11379] gi|291445832|ref|ZP_06585222.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291348779|gb|EFE75683.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 321 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 103/284 (36%), Gaps = 25/284 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-LLYFLISKIEE 62 V LS++ + V G + +L ++T V L A + IL+ G I +L+ + Sbjct: 42 VDLSHRGVVTVTGDDRLSWLHLLLTQHVSDLAPHQATEALILSANGHIEHATYLV--DDG 99 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120 T + ++ + LI L K V + + + V+ + + E Sbjct: 100 TTVWMHVEPDTQADLIAYLESMKFFYRVEVADRTPDTAVVHLPAGSIAEAPDGVAVRETP 159 Query: 121 SIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 D+ L R + A+ I Y LR+ + PH+ + Sbjct: 160 QGRDLFLPRDGLEAFAAAHGPAAGILAYEALRVEGHRPRVGFE-TDHRTIPHELGW-IGT 217 Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228 + L KGCY GQE V+R+ + +R + + LP G+P+ + ++G Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLG 277 Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + G ALA+ R VD + G V+ Sbjct: 278 FITTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321 >gi|167836302|ref|ZP_02463185.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis MSMB43] Length = 169 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A FL + +T D+ L AR + +P+G++L FL + D Sbjct: 41 LEQFGIVDVTGPDAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +L + + + ++ +L + LR+ + V + + + + S D Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGTLVAVGFAGDVRAALSGIFD 151 >gi|75907873|ref|YP_322169.1| glycine cleavage T protein [Anabaena variabilis ATCC 29413] gi|75701598|gb|ABA21274.1| Glycine cleavage T protein (aminomethyl transferase) [Anabaena variabilis ATCC 29413] Length = 327 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 90/276 (32%), Gaps = 44/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V + FL T D +L + ++T + + + S + +D I Sbjct: 27 STWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCDTVMVTSTARTI-DLVSSYVLDDAVI 85 Query: 67 LEIDRSKRDSLIDKLLFYKLR----------------------SNVIIEIQPINGVVLSW 104 L + S+R+ L+ L Y S+ ++E G++ Sbjct: 86 LLVSPSRREFLLQWLDRYIFFADKVQLTDITEETATFSIIGPGSDAVVEKLGAGGIIGQP 145 Query: 105 NQEHTFSNSSFI---DERFSIADVLL----------HRTWGHNEKIASDIKTYHELRINH 151 H + I + L + + + + + LRI Sbjct: 146 QGNHITIDGGAIVAVGSGLASPGYTLILPVSQKQQVWQQIIDSGAVELSDRAWDTLRILQ 205 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G P+++ P + + IS KGCYIGQE ++R+ +++ I Sbjct: 206 GRPAPDSELT-DDYNPLEVGLWQT--ISFNKGCYIGQETIARLNTYKGVKQYLWGIRLNA 262 Query: 212 DLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243 G I D ++G L G L R Sbjct: 263 PT-EIGDTITIGDEKVGKLTSYTETPDGYFGLGYIR 297 >gi|158334606|ref|YP_001515778.1| glycine cleavage T protein [Acaryochloris marina MBIC11017] gi|158304847|gb|ABW26464.1| glycine cleavage T protein, putative [Acaryochloris marina MBIC11017] Length = 354 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 107/312 (34%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ ++ + + FL T TL S +T + + + + + E+ + Sbjct: 46 THWGRLQFTDQDRLSFLHNQTTNTFKTLKPGEGCESVFVTSTARTI-DLVSAYVTEEAVL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIE-------------------------------- 93 L + ++R L+ Y V IE Sbjct: 105 LLVSPTRRAQLMSWCDRYIFFGDKVKIEDITTQTITFSLLGPESSRLLHKLGISDLPESP 164 Query: 94 -------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 I+ V S + T + F D + L + + K + + Sbjct: 165 HHHITTQIKGHTVRVASGSGLTTPGYTLFAD---AEVGADLWQALTEQDACPLGEKVWEQ 221 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR++ G P+ + P +A + IS KGCYIGQE ++R+ +++R Sbjct: 222 LRVSEGRPKPDAELT-EDFNPLEAGLWQT--ISFDKGCYIGQETIARLNTYQGVKQRLWG 278 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262 I + +PI +D ++G L +V G L + D + + TV G Sbjct: 279 IQL-GESVSVDTPITLEDKKVGVLTSLVETAEGPVGLGYVKTKAGDAGAQVSVG-TVTGT 336 Query: 263 RVKA---SFPHW 271 V+ ++P W Sbjct: 337 LVEVPFLTYPQW 348 >gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99] gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 363 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 99/304 (32%), Gaps = 47/304 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + GK +L I T V LP + + L QG++ I T Sbjct: 39 SHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVE-DHWIQTELGATTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 L+ + + + L++ L + V + + + L Q Sbjct: 98 LDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLM 157 Query: 107 EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 F + R AD + I TY R+ Sbjct: 158 AVPLPGGGFARRMPSSAGQIELDLLVPRDGTAD--WKHRLTQAGVRPAGIWTYEAHRVAA 215 Query: 152 GIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 D PH+ + + L KGCY GQE V+R+Q+ + +++ Sbjct: 216 KRPRLGVD-TDERTIPHEVGWIGGPGIGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLH 274 Query: 209 --GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ D P +G +L + +G +G VV L + + AL +A Sbjct: 275 LDGSTDRPSTGDSVLAGERSVGRVGTVVDHVDLGPVALALAKRGLPADTALMTG---AEA 331 Query: 267 SFPH 270 + P Sbjct: 332 TIPA 335 >gi|154338439|ref|XP_001565444.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062493|emb|CAM42355.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 397 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 70/204 (34%), Gaps = 25/204 (12%) Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR--TWGHNEKIASDIKTYHELRIN 150 T S D + + L R S + Y L + Sbjct: 182 SDSEDAAATFVTGPPPTSSLPPATDSVATPLNWFLRRCVVPATWAPPLSSVDPYTTLLYS 241 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG- 209 GI + F + P + +D L G+S KGCY+GQE+ R + RKR + + Sbjct: 242 RGIGEGPGVF-KNKSLPFEGNLDFLKGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLHFG 300 Query: 210 -TDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDH 249 T PP+ G P+ + E IG + V G+ + + R+ VD Sbjct: 301 PTSGGPPAVSTTTDDGAVATTRPVEIGEPLYSAAKEKIGVVTGVCGQVGVGLLRLRYVDK 360 Query: 250 AIKKGMALTV-HGVRVKASFPHWY 272 A L + G + P W+ Sbjct: 361 ATHTVPGLQLKDGTPAQTHLPDWW 384 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 5/119 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-- 61 L ++ ++V G A FLQ I T D+ L + L G++L + + + Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLHELHPNGSMYGCFLYFTGRVLCDAHLYQCKQL 68 Query: 62 ---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + + ++++ S L+D L K+R V I+ VVL+ +E + + + D Sbjct: 69 HERQASILVDVHESSVAELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSAAPPTGAD 127 >gi|319943553|ref|ZP_08017835.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599] gi|319743368|gb|EFV95773.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599] Length = 434 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + L N ++ G A FL + D+LTL AR + LTP G++L F + + Sbjct: 16 LPYALLQNLGVLRAQGPDAPSFLHGQFSNDILTLMPGHARLAGYLTPNGRLLATFWVIRH 75 Query: 61 E---------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 + TF L R ++ +L Y LR+ I + VL + + Sbjct: 76 DMPPAPEQPAVPTFWLVCSRDLAAAMAKRLSMYVLRAKCKIVDASNDHAVLGFVGPARRA 135 Query: 112 NSSFIDERFSIADVLLH 128 + + L Sbjct: 136 TQALAGHEDVVVTAALP 152 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 19/131 (14%) Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + +++S RF +++ + +L + GI T Sbjct: 244 DDNSAAADASQPAPRFRMSE-----------------SDWLQLDVASGIP-WICAASSET 285 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-D 223 P ++L+ G++ KGCY GQEVV+R ++R +++R + LP G+ +L D Sbjct: 286 FVPQMVNLELVGGVNFKKGCYPGQEVVARSEYRGKVKRRMFAGMCSGPLPEPGTDVLAWD 345 Query: 224 DIEIGTLGVVV 234 IG + V Sbjct: 346 GTPIGQVIHVA 356 >gi|209525728|ref|ZP_03274265.1| folate-binding protein YgfZ [Arthrospira maxima CS-328] gi|209493897|gb|EDZ94215.1| folate-binding protein YgfZ [Arthrospira maxima CS-328] Length = 349 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 100/298 (33%), Gaps = 47/298 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ + FL T + + +T + + + + E+ + Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGCDTVFVTSTARNI-DLATAYMTEEAVL 104 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS-------------- 111 L + ++R L+ L Y V I+ V S + S Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDRVNIKDISDQWAVFSLIGPESSSLLTKLGATMAENLT 164 Query: 112 -NSSFID------ERFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148 + ++D R +I L L + + + + +LR Sbjct: 165 RGNHWVDMVANISVRVAIGSGLAREGYTLIVPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G P+ + P +A + IS KGCYIGQE ++R+ +++R + Sbjct: 225 ILQGRPTPDRELT-EDYNPLEAGL--WGNISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262 + G+ I D ++G L + G L R ++ + T V Sbjct: 282 LSG-FVEPGTVINLKDEKVGKLTSITETQEGWFGLGYIRTKAGGEGLEVSLGDTTATV 338 >gi|168059980|ref|XP_001781977.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666550|gb|EDQ53201.1| predicted protein [Physcomitrella patens subsp. patens] Length = 357 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 107/310 (34%), Gaps = 54/310 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61 V +S I+V G+ I FL TAD L + +T G+ L + K Sbjct: 47 VEMSQIGRIRVTGEDRIRFLHNQTTADFQKLKDGEGCDTVFVTSTGRTIDLAKAWVMK-- 104 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEI-------------------------- 94 ++ IL + S+R SL L Y + V +E Sbjct: 105 -NSVILFVSPSQRQSLCALLNKYIFFADKVEVEDITDKTYYFTLVGPNSSKVCFRSFTIK 163 Query: 95 QPINGVVLSWNQEHTFS----NSSFIDERFSIA-----DVLLHRTWGHNEKIASDIKTYH 145 G + + E T S +S ++ + + + Sbjct: 164 DKPYGSFMHYAIEGTPVTVGVGSGLASPGYSFMLSTDTAGIVWEAILNAGAVPMGAAAWE 223 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 +LR+ G P + S +A + + IS+TKGCYIGQE ++R+ + ++++ Sbjct: 224 QLRVWQGRPAPGRELT-SEYNALEAGL--WHTISMTKGCYIGQETIARLITYDGVKQQLY 280 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK--------ALAIARIDKVDHAIKKGMAL 257 + + + I ++ +G L V K LA R + + Sbjct: 281 TVH-MNGYAEPETEITCNEARVGKLTSCVEAKEGSEHSHVGLAYIRRKSGGENLVVDIG- 338 Query: 258 TVHGVRVKAS 267 V G V+AS Sbjct: 339 GVSGRVVEAS 348 >gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] gi|262084295|gb|ACY20263.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] Length = 389 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 104/305 (34%), Gaps = 53/305 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I++ G + +L I + + LP + + + L G++ +F+++ ++ T Sbjct: 51 SDRAVIEISGDERLTWLHTISSQHISNLPDRSSAENLSLDVNGRVEEHFVLTDVDGVT-W 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-------------------------IEIQPINGVV 101 ++ + S+ +L L + +EI P + Sbjct: 110 VDTEGSRGAALHGFLAKMVFWAKAEPVLRPDMKVVTLVGPAARSGQIAELLEIDPDAPIY 169 Query: 102 LSWNQEHT----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIK 142 + + T N++ + + LL R W + Sbjct: 170 AAGDLPETHHEDEPLGFWRVMPPIGENATLPVVDVVLPEYLLDRWWSALVDAGARMAGTW 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRN 198 + LR+ D PH+ + L KGCY GQE V+R+ + Sbjct: 230 AFDALRVAAVRPRLGAD-TDDRTIPHEVGWIGGPAEFGAVHLDKGCYRGQETVARVHNLG 288 Query: 199 IIRKRPMIITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 +R +++ P +G P++ +G LG VV L + + V + Sbjct: 289 KSPRRLVLLHLDGSADGRPATGDPVVAGGRTVGRLGTVVDHFELGLVALALVKRNVPADT 348 Query: 256 ALTVH 260 L V Sbjct: 349 DLVVG 353 >gi|119713593|gb|ABL97644.1| hypothetical protein MBMO_EB0-39H12.0020 [uncultured marine bacterium EB0_39H12] Length = 274 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 22/250 (8%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IE 61 + L + S +++ G+ + LQ IT+DV A AI +G+++ F + K Sbjct: 6 LINLEHLSILELNGEGSFQLLQGQITSDVNKATINNAEIGAICDIKGRVVSSFTVIKNTA 65 Query: 62 EDTFILEIDRSKR----DSLIDKLLFYKLRSNV-------------IIEIQPINGVVLSW 104 + ++L D+S + L+ FY + V ++E P + S+ Sbjct: 66 SEGYLLIGDKSVLQKTEEILMKYQPFYDVEIKVNEDFKFYGIHEEYLVEYYPQTDLEKSY 125 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 +F F+ +++ I L+ + + I+ + I + + ++ + Sbjct: 126 QLYDSFWRIHFLKKKYHI---LITKEDLFEDNHEVQIEEWFIDDIQNKNFEISSKSI-GM 181 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224 PH+ L + + KGCY GQE+V+R+ +R ++ + + L + Sbjct: 182 FTPHELGYHLSSRVDFEKGCYTGQEIVARMHYRAKKLPSLLVKSSSTFLEDYSKVFDANK 241 Query: 225 IEIGTLGVVV 234 IG + + Sbjct: 242 TAIGIILSSI 251 >gi|56750597|ref|YP_171298.1| glycine cleavage T-protein [Synechococcus elongatus PCC 6301] gi|81299763|ref|YP_399971.1| glycine cleavage T-protein-like [Synechococcus elongatus PCC 7942] gi|56685556|dbj|BAD78778.1| similar to glycine cleavage T-protein [Synechococcus elongatus PCC 6301] gi|81168644|gb|ABB56984.1| glycine cleavage T-protein-like [Synechococcus elongatus PCC 7942] Length = 344 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 97/294 (32%), Gaps = 52/294 (17%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 S I+V + + FL T A + ++T +IL I+ I+ + L Sbjct: 33 WSVIQVSDRDRLTFLHNQSTQSFWQRQPGEACETVLVTATARIL-DLAIAVIDVEAVWLL 91 Query: 69 IDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIADVL 126 + S++ L+ +L Y S V + VL+ + T S + + + Sbjct: 92 VSPSRQADLLQRLDRYIFFSDQVTVADADSTLAVLTLIGDSTRSLLQTVVADALPELTEN 151 Query: 127 LHRTWGHNEK------------------------------------IASDIKTYHELRIN 150 H + + ++ + LRI Sbjct: 152 QHAALAIAGQSVQWVNYSGLGLPGSLLLVPVSGLDAVQAALQAAGAQLATVEQWERLRIQ 211 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P +A + +S KGCYIGQE ++R+ +++R + T Sbjct: 212 QGRPAVDRELT-EEYNPLEAGLWQT--LSFDKGCYIGQETIARLNTYKGVKQRLYGLALT 268 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260 +P+L + ++G L + G L R G LTV Sbjct: 269 TLPSQLPAPLLLEGEKVGVLTSAIATATGAIGLGYLRTKA------GGAGLTVD 316 >gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] gi|118175099|gb|ABK75995.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] Length = 359 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 102/304 (33%), Gaps = 49/304 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + GK +L I + V P + L QG++ + + T Sbjct: 39 SHRAVLALTGKDRQGWLHNISSQHVSAQPDGTVTENLSLDMQGRVE-DHWVQTELDGTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----------GVVLSWNQEHTFSNSSF 115 L+ + + + L L S+V IE + VLS + Sbjct: 98 LDTESWRGEPLAAYLRKMVFWSDVQIEPADLGVLSLLGPALAGDAVLSALGLSALPEEAT 157 Query: 116 IDE--------RFS----IADVLLHR--------TWGHNEKIASDIKTYHELRINHGIVD 155 R DVL+ R + + Y R+ Sbjct: 158 AQPLPGGGFVRRVPSEGLELDVLVARETLDDWKQRLVSAGVRPAGMWAYEAHRVAAQRPR 217 Query: 156 PNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210 D PH+ + + L KGCY GQE V+R+ + + +++ G+ Sbjct: 218 LGVD-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGS 276 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG-VRV 264 D P +G P+L +G LG VV G ALA+ V + L G V V Sbjct: 277 SDRPATGDPVLAGGRTVGRLGTVVDHVDDGPIALAL-----VKRGLPAETELMTGGSVEV 331 Query: 265 KASF 268 AS Sbjct: 332 PASI 335 >gi|54022550|ref|YP_116792.1| hypothetical protein nfa5830 [Nocardia farcinica IFM 10152] gi|54014058|dbj|BAD55428.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 371 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 100/302 (33%), Gaps = 41/302 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ +++ G + +L I + V L + + + L G+I +F++S ++ T Sbjct: 52 SHRFVLRITGGERLSWLHTISSQHVANLGDRRSAENLDLDLNGRIQHHFVLSDLDG-TVW 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107 ++ + + +L+D L ++ + V+ E Sbjct: 111 IDTEADRGPALLDFLTKMVFWADAKPAEATDHAVLSLLGPEVARLHEALGVTELPEIYAV 170 Query: 108 HTFSNSSFIDE-RFSIAD-----------VLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + F+ + AD T + + + LR+ Sbjct: 171 TPLPDGGFLRRMPWPTADSYDLVVPRERLGAWWTTLTEAGAEPAGMWAFEALRVAALRPR 230 Query: 156 PNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D PH+ + L KGCY GQE V+R+ + ++ +++ Sbjct: 231 IGLD-TDERTIPHEVRWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRQLVLLHLDG 289 Query: 212 DL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P G+ + +G LG VV L + V A+ LT G A Sbjct: 290 SADERPQPGADVTAGGRTVGRLGSVVDHYELGPIALALVKRAVPADAQLTT-GPSAAAID 348 Query: 269 PH 270 P Sbjct: 349 PD 350 >gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 360 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 95/292 (32%), Gaps = 43/292 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L +I T V LP + + L QG++ + DT Sbjct: 39 SHRAVLTLTGSDRQKWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWVQTELGDTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV---------------------IIEIQPINGVVLSWN 105 L+ + + + L++ L S+V ++E ++ + Sbjct: 98 LDTEPWRGEPLLEYLRKMVFWSDVAPAAADMAVLSLLGPRLSDPAVLEALGVDALPAELT 157 Query: 106 QEHTFSNS---------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + R A + I Y R+ Sbjct: 158 AMPLAGGGFARRMPGLPAGQIELDLVVPRGESAG--WQERLVRAGLRPAGIWAYEAHRVA 215 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208 D PH+ + + L KGCY GQE V+R+ + + +++ Sbjct: 216 ALRPRLGVD-TDERTIPHEVGW-IGGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLD 273 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 G+ D P +G P+L D +G LG VV L + V + L Sbjct: 274 GSVDRPSTGDPVLADGRAVGRLGTVVDHVDLGPVALALVKRGVPADTELATG 325 >gi|87311326|ref|ZP_01093447.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM 3645] gi|87285906|gb|EAQ77819.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM 3645] Length = 318 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 40/277 (14%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L ++ +++ G + FL + TA++ LP + I T QG+IL +F + Sbjct: 18 CFNLPRRTRLQMSGADRVKFLHNLSTAEIKKLPPGQGCETFIPTLQGRILGHFFALPT-D 76 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSF----- 115 ++ +L ++ ++L+ Y + +V + + +L T+ ++ Sbjct: 77 NSILLTGVSNQAETLLPHFQKYAVIEDVEVVDRTADTSEYLLVGPHAATWIEQTWGIAPP 136 Query: 116 -------IDERFSI--ADVLLHRTWG--------------HNEKIASDIKTYHELRINHG 152 D+ +I + H WG + LRI G Sbjct: 137 ETNLQIVADDDVTIYRTPYVGHSAWGVIASGENQAAPADALAALPQGTEEALSALRIEAG 196 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D +A D IS TKGCY+GQE ++RI + +R + + Sbjct: 197 FPYFGRDITSEN-LAQEADRDAA-AISFTKGCYLGQETIARIDALGHVNRRLLGVKFAAK 254 Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243 P + D + + LA+ R Sbjct: 255 -PSDEATFEIDGKSALNVTSIAFSQDQDQWIGLAMVR 290 >gi|255609522|ref|XP_002539057.1| Protein ygfZ, putative [Ricinus communis] gi|223508958|gb|EEF23326.1| Protein ygfZ, putative [Ricinus communis] Length = 233 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ +++ G+ FLQ +T D+ L + + T +G++L L+ K + D Sbjct: 41 ADLSHLGLLELTGEDTQAFLQGQLTNDIKLLTGSNSEYAGYCTAKGRLLATMLLWK-QGD 99 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 T ++D +++ +L + LRS V I V + + + S + F Sbjct: 100 THYAQLDGGIAPTIMKRLSMFVLRSKVKIADVSTVKVRIGLSGRQAETALSGL---FPAI 156 Query: 124 DVLLHRTWGHNEKI 137 H+ HNE Sbjct: 157 PAQPHQLVVHNEAT 170 >gi|289548965|ref|YP_003473953.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484] gi|289182582|gb|ADC89826.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484] Length = 301 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 107/295 (36%), Gaps = 43/295 (14%) Query: 9 QSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 +S IKV G + FL ++T DV +P +L G + F + Sbjct: 8 RSKIKVYGQKNRLAFKGLDEEHTLFLHGLLTNDVKGMPPFSVSYHLMLRQNGAPIREFFL 67 Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-------------QPINGVVLSW 104 K++ D ++L+ + +I+ L KL V +E + V W Sbjct: 68 YKLQ-DHYLLDTPDPAKQ-VIEDLEKRKLSLKVYLEDLTPNYRHIFLLGEDSKDFVEKVW 125 Query: 105 NQEH-----TFSNSSFIDE---RFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGI 153 S I RF L E S + LRI I Sbjct: 126 GNAPQEGRLIVEGSVIIAHNSVRFRETGYDLIGELSDLELPESLMMTTEEAENLRIRRCI 185 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P +A + L ISL KGCY+GQE ++R+ +R + +++ Sbjct: 186 PAVGKELREG-FSPLEAGV-LRYAISLNKGCYVGQEAIARVYYRGRTPRTLVLLQAEG-- 241 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + D ++GT+ V G + A+ + +V HA K+ + T G VK Sbjct: 242 LREGEKLFDGDKQVGTVTSV-GSEGYALGYVLRV-HAQKEKVLYTPEGTAVKLIK 294 >gi|296395429|ref|YP_003660313.1| folate-binding protein YgfZ [Segniliparus rotundus DSM 44985] gi|296182576|gb|ADG99482.1| folate-binding protein YgfZ [Segniliparus rotundus DSM 44985] Length = 338 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 99/280 (35%), Gaps = 35/280 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN I++ G + +L I+T V LP + +L G++ + + + E+ ++ Sbjct: 42 SNLDVIRLTGPERLAWLNKIVTQKVDELPAPSWVQALVLDAHGRVEHHMEVHETGEEAWL 101 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---HTFSNSSFIDERFSIA 123 + + ++L+ L ++V E P + V+ + H + R+S Sbjct: 102 V-TEPGHGEALLAYLAKMVFWADVAPEPAPQHKVLAVYEGAARRHLVLSPEQFAPRWSQL 160 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL--------MDLL 175 R G LR+ D PH+ + Sbjct: 161 VQGGARPVG--------TWAVEALRVAALEPRLGAD-TDERTVPHEVGWVNPRGSALPEW 211 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLG 231 + L KGCY GQE VS+I + ++ +++ DL P + + +G LG Sbjct: 212 KAVHLGKGCYRGQETVSKIANVGRPPRQLVLLHLDGETWGDLRPGETVLDEGGSSVGRLG 271 Query: 232 VVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 V G ALA+ V + L V G + Sbjct: 272 TAVAHYEFGDIALAL-----VKRGLSPEAPLIVAGRPAQL 306 >gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] gi|126237284|gb|ABO00685.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] Length = 356 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 101/296 (34%), Gaps = 52/296 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-EDTF 65 S+++ + + G +L I + + P + L QG++ + E + Sbjct: 38 SHRATLALSGAERRSWLHTISSQHISDQPDGTVTQNLSLDGQGRVE-DHW-WQTELDGVL 95 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------------GVVLSWN 105 L+ + + + L++ L ++V IE + G + + + Sbjct: 96 YLDTEPWRGEPLLNYLRRMVFWADVTIEPADLAVLSLLGPALADTPVLDALGLGSLPAES 155 Query: 106 QEHTFSNSSFID-------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 FI R +AD T + + Y R+ Sbjct: 156 TAVALPGGGFIRRLPADGLELDLLVPRAQVADWRDRLTAAGVRP--AGVWAYEAHRVAAL 213 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210 D PH+ + + + L KGCY GQE V+R+ + + + + GT Sbjct: 214 QPRLGVD-TDERTIPHEVGW-IGSAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGT 271 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG 261 D P +G P+L +G +G VV G ALA+ V + LT G Sbjct: 272 TDRPSTGDPVLAGGRTVGRVGTVVEHIDDGPVALAL-----VKRGLPADTPLTTGG 322 >gi|295837501|ref|ZP_06824434.1| glycine cleavage T protein [Streptomyces sp. SPB74] gi|295826551|gb|EDY44879.2| glycine cleavage T protein [Streptomyces sp. SPB74] Length = 326 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 22/259 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + +L+ G + + + + Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T L ++ R++L L K V + + V+ + + E Sbjct: 106 TTWLHVEPGTREALAAYLESMKFFYRVEVVDRTEEYAVVRLPAGSITPSPEGAAVRETPE 165 Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L R A+ LR+ + + PH+ L Sbjct: 166 GRDVFLPRAELAAFAGAAGPAIGLLALEALRVEAHLPRLGFE-TDHRTIPHEVGW-LARA 223 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LPP G+P+ + +G Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGAESRVLGF 283 Query: 230 LGVVV-----GKKALAIAR 243 + G AL + + Sbjct: 284 VTTSARHHELGPIALGLIK 302 >gi|117927273|ref|YP_871824.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus cellulolyticus 11B] gi|117647736|gb|ABK51838.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus cellulolyticus 11B] Length = 352 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 30/288 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ +++ G + +L + T ++ LP + + +L+P G + + ++ + Sbjct: 45 VDLSHRGVVQISGPDRLRWLNDLTTQRLIDLPAQTGTETLVLSPNGHVEHHLMLV-DDGT 103 Query: 64 TFILEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 T + ++ L+D L + LR +E + + Q + F Sbjct: 104 TTWVHVEPGTAGGLVDFLSSMRFLLR----VEARDVTDDWAVVWQPVDQPHPEFPTRVDP 159 Query: 122 IADVLLHRTW----GHNEKIASD------IKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 AD L R + +D I ++ LRI G D PH+ Sbjct: 160 RADALHGRELFIPRKQFPAVIADFGRPAGIAAWNALRIEAGRPRFGVD-TDHRSIPHELG 218 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEI 227 + L KGCY GQE V+ + + +R + + LP G+ +L Sbjct: 219 WIGF-AVHLNKGCYRGQETVAHVANLGRPPRRLVRLHLDGSVREQLPAKGAQVLVAGTVA 277 Query: 228 GTLGVVV-----GKKALAIAR--IDKVDHAIKKGMALTVHGVRVKASF 268 G L G ALA+ R +D AI + T ++ Sbjct: 278 GHLTSAAYHHELGPIALALVRYAVDDSAAAIVRDADGTDRAATIEPIV 325 >gi|324519008|gb|ADY47260.1| Transferase caf-17 [Ascaris suum] Length = 186 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%) Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 V IE +N + + + +D R L + +A D Y E R+ Sbjct: 5 VAIEKCGMNVFFV-----ESTCEGAVVDPRVPAFGSRLLSDSLPDSTLA-DASLYEERRL 58 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GIV+ + P DL++G+S KGCY+GQE+ +R R I+KR + T Sbjct: 59 EFGIVEGGIE--TRGALPVYRNADLMHGMSDNKGCYLGQEMTART-LRAAIKKRVLPFTC 115 Query: 210 TDDLPPSGSPILTDD-IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + D +G + V G + LA+ R+D+ D L V ++ Sbjct: 116 DG--AAKGRVMDPDGYTNMGEVLVCNGHRGLALLRLDQGD----VSRCLKAGDVDIRPFV 169 Query: 269 PHWY 272 P W+ Sbjct: 170 PSWW 173 >gi|170077702|ref|YP_001734340.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus sp. PCC 7002] gi|169885371|gb|ACA99084.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus sp. PCC 7002] Length = 352 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 98/301 (32%), Gaps = 51/301 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK--------ILLYFLIS 58 S+ + G +L T + L + + ++ + IL L Sbjct: 49 SHWGLLNFTGADRQRYLHNQSTNQIQQLQSGQSCDTVLVNSTARTIDLATVHILDDALWV 108 Query: 59 KIEED--TFILE-----------IDRSKRDSLIDKLLFYKLRSN--------VIIEIQPI 97 ++ TF+LE ++ S + L +++ V + P Sbjct: 109 QVSPQKKTFLLEWFDRFLFPMDKVEISDLSGQFNILSLMGVQAKEILEKLTGVTLADFPA 168 Query: 98 NG----------VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 G ++ + + + A V + + + I + +L Sbjct: 169 GGHQFLEIQGQNILCATGNSLKLPGYTLYIP--AEAGVEIWQALMNLGMIPCGEAAWEKL 226 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI+ G P+ + P +A + + IS KGCYIGQE ++R+ +++R I Sbjct: 227 RIHQGRPAPDQELT-EDYNPLEAGL--WDCISFDKGCYIGQETIARLNTYKGVKQRLFGI 283 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + I + G + + AL R ++ +TV V K Sbjct: 284 QLSAPVAVP-CKIFVGEERAGVITSIDPDNTFALGYVRTKVGGEELE----VTVGEVTGK 338 Query: 266 A 266 Sbjct: 339 V 339 >gi|111021816|ref|YP_704788.1| hypothetical protein RHA1_ro04845 [Rhodococcus jostii RHA1] gi|110821346|gb|ABG96630.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 373 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 44/300 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G + +L I + V LP + + L G++ +F+ + ++ T Sbjct: 54 SHRFVIAISGPERLTWLHTISSQHVAALPDGASAENLSLDVNGRVEHHFVQTDLDGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-----------------IEIQPINGVVLSWNQEHT 109 ++ + + L+ L S + + GVV Sbjct: 113 IDTEADRGPDLLSFLTKMVFWSKAEPREGNELAVLSVIGPDAVTVLDAAGVVAPAEPYAA 172 Query: 110 FS----------------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + + + R +A + + LR+ Sbjct: 173 VAVPGGGFVRRMPWPAAESFDLVIPREGLATWWGR--LTAAGAAPAGTWAFEALRVAAAR 230 Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 231 PRIGLD-TDDRTIPHEVRWIGGPADHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHL 289 Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 P G P+ +G +G V+ L + V +I L V Sbjct: 290 DGSAEGRPEPGDPVTAGGRAVGRIGTVIDHHELGPIALALVKRSIPTDTELVVGSCAASI 349 >gi|148657807|ref|YP_001278012.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus sp. RS-1] gi|148569917|gb|ABQ92062.1| aminomethyltransferase [Roseiflexus sp. RS-1] Length = 324 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 92/296 (31%), Gaps = 51/296 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ L + T D+ L + + TP G+I+ L D ++ Sbjct: 28 IFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRII-DLLTVHALNDALLIVTSP 86 Query: 72 SKRDSLIDKLLFYKLR-SNVIIE-------------------IQPINGVVLSWNQEHTFS 111 + + L V ++ I + G + + Sbjct: 87 DQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELTGAAIDLPLHGITT 146 Query: 112 N-----SSFIDERFSIADV------------LLHRTWGHNEKIASDIKTYHELRINHGIV 154 S I R I + D T LRI G Sbjct: 147 TAIAGVSLLIARRKPIGGDSFTLYVPSDGYDAVQAALLAAGATPIDGDTLDVLRIERGYG 206 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + P + + L+ +S +KGCY+GQE+++R++ R + KR + + + Sbjct: 207 AFGREL-SQEYIPLETGL--LDAVSFSKGCYVGQEIIARMESRGRLAKRLCGLQLSQPVA 263 Query: 215 PSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + ++ D + G L G ALA R + G + V G V Sbjct: 264 SP-AKLVCDGRDAGDLTSAAVSPRFGPIALAYVRTVYAE----PGTVVGVEGTGVT 314 >gi|288818695|ref|YP_003433043.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6] gi|288788095|dbj|BAI69842.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6] gi|308752283|gb|ADO45766.1| folate-binding protein YgfZ [Hydrogenobacter thermophilus TK-6] Length = 300 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 110/304 (36%), Gaps = 50/304 (16%) Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49 M + LS + IKV G + FL +++ D+ + + L G Sbjct: 1 MKGIILS-RHKIKVYGRQGKILPKGVEEEHTAFLHNLLSNDIKGMKEGSLLYNLWLRQNG 59 Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 + F + K+ + ++L+ + + + KL V E + E Sbjct: 60 TPIEDFFVYKLG-NYYLLDTEGD-ATKITQEFSRLKLSLRVYFEDLTQSLSHAFIFGEGA 117 Query: 110 FSNSSFIDERFSIA----------DVLLHR-----------TWGHNEKIAS--------D 140 F+ ERF + D+LL R G +K+ Sbjct: 118 RE---FVKERFGVTLEEGNVLELEDILLARNHIRLREEGYDILGSIQKLKELLKGVEMIS 174 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + ++RI + + + P +A + L ISLTKGCY+GQE ++R+ +R Sbjct: 175 SEEFEDIRIENLVPRIRKELREG-FSPLEAGV-LNYAISLTKGCYVGQEAIARVYYRGRT 232 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + + G I + +IG + V + LA+ I + I + + T Sbjct: 233 PRVLAKFEARN--VREGDKIKEGEKDIGIITSVNSRGDLALGYILRAKANIGEVLPCTAG 290 Query: 261 GVRV 264 VR+ Sbjct: 291 EVRL 294 >gi|269793838|ref|YP_003313293.1| folate-binding protein YgfZ [Sanguibacter keddieii DSM 10542] gi|269096023|gb|ACZ20459.1| folate-binding protein YgfZ [Sanguibacter keddieii DSM 10542] Length = 369 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 107/318 (33%), Gaps = 55/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS+ + V G + +L +I + +L L + + + +L+P G + + + + Sbjct: 44 VDLSHHGVVTVSGPDRLGWLNSITSQLLLDLGPRDSTETLVLSPHGHVEHAMSVV-DDGE 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSWNQEHT 109 T L + SK L L K V I V ++W Sbjct: 103 TTWLVTEGSKAAELTAWLQRMKFMMRVEITDATDAWAVIGEPVDAEGTPDETVTWRDPWP 162 Query: 110 FSNSS-----FIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRINH 151 + D+ + E +A + LRI Sbjct: 163 RTREGGTRYGLPDDEHPGTERPWRLVLVPRETLAEAAAAREAAGWRLAGTWASEALRIAA 222 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 T+ + PH+ +D L + L KGCY GQE V+R+ + +R ++ Sbjct: 223 WRPRLATE-VDHKTIPHE--LDWLRTSVHLHKGCYRGQETVARVHNMGRPPRRLVMAHLD 279 Query: 211 DD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR------IDKV----DHAIK 252 LP G+ + D +GT+ V G ALA+ + +D + + Sbjct: 280 GSGHLLPEVGAAVEAGDRSVGTVTSVARHHELGPVALAVVKRSTPTDVDLLVACDGGDVA 339 Query: 253 KGMALTVHGVRVKASFPH 270 G + V G V P Sbjct: 340 AGQEVVVPGEGVSVDRPA 357 >gi|225447955|ref|XP_002269147.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|298204501|emb|CBI23776.3| unnamed protein product [Vitis vinifera] Length = 430 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 106/315 (33%), Gaps = 55/315 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIE 61 V LS+ I+V G I FL TA+ L + +TP + + + I K Sbjct: 114 VDLSHFGRIRVSGDDRIQFLHNQSTANFECLQEGQGCDTVFVTPTARTIDVAHAWIMK-- 171 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------- 96 + L + S+I+ L Y ++ +EIQ Sbjct: 172 -NAVTLVVSPVTCGSIIEMLTKYIFFAD-KVEIQDITKKTSFFVLVGPKSHQVMEDLNLG 229 Query: 97 --------------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 +NG+ ++ + S F + + I Sbjct: 230 ALVGKPYGTHQHFMVNGMPITVGVGNAISEDGFSFMMSPAIAGSVWKALLSQGAIPMGSN 289 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + +LRI G P + + +A + N ISL KGCY GQE +SR+ + +++ Sbjct: 290 AWEKLRIFQGRPAPGKELT-NEFNVLEAGL--WNSISLNKGCYKGQETISRLITYDGVKQ 346 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMA 256 R I+ + GSPI D ++G L + L + + + Sbjct: 347 RLWGISLSGP-AEPGSPITADGKKVGKLTSYACGRTESEHFGLGYIKRQAASNGNTVIVG 405 Query: 257 LTVHGVRVKASFPHW 271 + G V+ F W Sbjct: 406 DNIAGTVVEVPFLAW 420 >gi|291452306|ref|ZP_06591696.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291355255|gb|EFE82157.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 325 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 25/285 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L +IT V LP A + +LT G I + + Sbjct: 44 VDLSHRGVLTVTGDDRLSWLHLLITQHVSELPAGRATEALVLTANGHIEHALYLV-DDGT 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDER 119 T + ++ + +L+ L K V + ++ S ++ + E Sbjct: 103 TTWVHVEPGTQGALLAYLESMKFFYRVEAADRTEEFALVHLPAGSIVSLAEGEAAAVRET 162 Query: 120 FSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 DV L R + A + + LR+ + PH+ + Sbjct: 163 PYGRDVFLERGRLEEFAAAHGPAVGVLAHEALRVEAHRPRLGFE-TDHRTIPHELGW-IG 220 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEI 227 + L KGCY GQE V+R+Q+ +R + + LP G+P+ D ++ Sbjct: 221 TAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPGPGTPVRLAADGPDGRKL 280 Query: 228 GTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 G + G ALA+ R VD + V V+ Sbjct: 281 GFVTTSARHHELGPIALALVKRNVPVDAELIAESTAAAQEVVVEP 325 >gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315442670|ref|YP_004075549.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] gi|145214716|gb|ABP44120.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315260973|gb|ADT97714.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] Length = 367 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 97/291 (33%), Gaps = 38/291 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L I + V LP + L QG+I + + Sbjct: 42 SHRAVLTLTGGERKSWLHTISSQHVSELPDGAVTENLSLDGQGRIE-DHWVQTELNGRTV 100 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 ++ + ++ ++L L S+V IE + V+ + + + Sbjct: 101 IDTEPARGEALESFLRKMVFWSDVAIESSDLAVLSLLGPGVADPAVLTALGLDALPPEGT 160 Query: 115 FID-------ERFSIADV------------LLHRTWGHNEKIASDIKTYHELRINHGIVD 155 ++ R ++V + + Y R+ Sbjct: 161 AVELADGGYVRRLPGSEVEVDLVVPRPEVTRWFDALVAAGVRPAGLWAYEAHRVAAQRPR 220 Query: 156 PNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210 D PH+ + + L KGCY GQE V+R+ + + +++ G Sbjct: 221 LGID-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLVHLDGD 279 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 D P G P+L +G LG VV + + V + ALT G Sbjct: 280 GDRPSPGDPLLAGGRAVGRLGTVVDHVDEGVIALALVKRGLPVDTALTTGG 330 >gi|309812600|ref|ZP_07706345.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185] gi|308433451|gb|EFP57338.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185] Length = 385 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 100/302 (33%), Gaps = 49/302 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS + ++V G + +L ++ T + L + + +L+P G + + E Sbjct: 84 VDLSARGVVRVAGPDRLSWLHSMTTQHLADLAPFTSTETLVLSPHGHVEFALHVVDDGEA 143 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNS-------SF 115 T L D + L L + V + ++ + V+ N E + ++ Sbjct: 144 T-WLTTDPGRSAELAAWLRRMQFMLRVEVADVSDEHAVIGEVNDEESTPEQVRETGVIAW 202 Query: 116 IDERFSIADVLLH-----------RTWGH------------NEKIASDIKTYHELRINHG 152 D ++ V R W E + + LR+ Sbjct: 203 RDPWPALGPVSAAYGPSAQHPGSERRWRELIVPRERFEAVFAEAQPAGLWAAEALRVAAW 262 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D + + PH+ L + + L KGCY GQE V+R+ + +R + Sbjct: 263 RPDGLLE-VDHRTIPHELDW-LRSAVHLQKGCYRGQETVARVHNLGRPPRRLAFVHLDGS 320 Query: 213 ---LPPSGSPILTDDIE--IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGV 262 LP G+ ++ G L V G L + + + L + GV Sbjct: 321 DHTLPEVGAEVMVPGAPRAAGRLTSVARHHIDGPIGLVVLK-----RSTPADAPLLIGGV 375 Query: 263 RV 264 Sbjct: 376 AA 377 >gi|300866104|ref|ZP_07110832.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria sp. PCC 6506] gi|300335900|emb|CBN55990.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria sp. PCC 6506] Length = 353 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 99/300 (33%), Gaps = 49/300 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ ++V G+ + FL T + L + +T + + + I ED + Sbjct: 49 THWGRLEVSGEDRLRFLHNQSTNNFNILQPGQGCDTVFVTSTARTI-DLATAIITEDKVL 107 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109 L + ++R L++ L Y V ++ S H+ Sbjct: 108 LLVSPNRRQKLLELLDRYIFPMDKVELKDVTDATATFSLIGPHSNKLLDKLGITGIEGKP 167 Query: 110 -----------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 + S + L N I + + + Sbjct: 168 YGTHKLIENTTTESSIRVVVGSGLATSGYTIIVDGNQAANLWDKLVQNGAIPAGDRVWEH 227 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI G P+ + P +A + L+ IS KGCYIGQE ++R+ ++++ Sbjct: 228 LRIEQGRPAPDFELT-DEYNPLEARL--LHTISYDKGCYIGQETIARLNTYKGVKQQLWG 284 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262 + + + G+ + + ++G L V G LA R +K + V Sbjct: 285 LRLSGE-AEVGAAVTIGEEKVGKLTSFVVTDDGPFGLAYIRTKAGGEGLKVQVGEIEGEV 343 >gi|302531017|ref|ZP_07283359.1| glycine cleavage T protein [Streptomyces sp. AA4] gi|302439912|gb|EFL11728.1| glycine cleavage T protein [Streptomyces sp. AA4] Length = 373 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 97/299 (32%), Gaps = 49/299 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G+ + +L +I+ V L + +L QG + +F+++ E T Sbjct: 49 SHREILAVTGEERLSWLHLVISQHVTELAGNTGTEALVLDSQGHVDTHFVLAHAGE-TVY 107 Query: 67 LE----------IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----- 111 L+ + + + +L + L K S V I VLS T S Sbjct: 108 LDSDPGPLVTSALPKGGKQTLREYLEAMKFWSKVEIRDATEELAVLSVLGPETDSVLGVE 167 Query: 112 --------------------------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + + R + + + T+ Sbjct: 168 LGTEPYSVAALPEGGFARRMPWPTRAGADLVVPRAQLTQ--WWQRLTDAGARPAGSWTFD 225 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ D PH+ + + + KGCY GQE VS++ + + Sbjct: 226 ALRVESRHPRLGVD-TDERTIPHEVGW-IGSAAHVAKGCYRGQETVSKVHNVGRPPRYLA 283 Query: 206 IITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 ++ P +G P+ + +G +G V L + V ++ G L Sbjct: 284 LLHLDGSPEITPETGDPVKLGERVVGRIGTVAQHHELGPIALALVKRSVPGGAELLAGD 342 >gi|325109375|ref|YP_004270443.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305] gi|324969643|gb|ADY60421.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305] Length = 340 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 101/318 (31%), Gaps = 60/318 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + + G + FLQ T DV LP + I +G+ L + IS D Sbjct: 25 LSTRDELTLTGSDRVSFLQGFCTNDVKRLPVGGVCEAFIPNVKGRTLGHVFIS-AGVDQL 83 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------SWNQEHTFSN 112 L+ ++L+ L Y + +V + + + W Sbjct: 84 TLDSVAQANETLLPHLDRYLIVEDVELTSTTADRRLFFVTGPKALQVISQVWPDAAALPP 143 Query: 113 SSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149 ++FI+ V + R + D + +R+ Sbjct: 144 NAFIEVSAGEFPVTVRRVDWLGQPGFQIRVPAENGETVQSQIVQAGAVVGDESVWEAVRL 203 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRN----IIRKRP 204 + D DF + D IS KGCY+GQE ++RI ++R Sbjct: 204 EACLPDHGRDF-SEDNLAQEV--DRTEAAISFHKGCYLGQEPIARIDALGHVNWLLRGLK 260 Query: 205 MIITGTDDLPP-SGSPILTDD--IEIGTLGVVVG------------KKALAIARIDKVDH 249 + + DL SG+ + D +GT+ V A+AI R ++ Sbjct: 261 LELPEDADLAEISGAELKVDGQEKPVGTVRSVAAIPCESGESPGRSCVAMAIVRREQSVA 320 Query: 250 AIKKGMALTVHGVRVKAS 267 + V V Sbjct: 321 ETVLQLETKSGAVPVTVF 338 >gi|239980446|ref|ZP_04702970.1| hypothetical protein SalbJ_13463 [Streptomyces albus J1074] Length = 318 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 25/285 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L +IT V LP A + +LT G I + + Sbjct: 37 VDLSHRGVLTVTGDDRLSWLHLLITQHVSELPAGRATEALVLTANGHIEHALYLV-DDGT 95 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDER 119 T + ++ + +L+ L K V + ++ S ++ + E Sbjct: 96 TTWVHVEPGTQGALLAYLESMKFFYRVEAADRTEEFALVHLPAGSIVSLAEGEAAAVRET 155 Query: 120 FSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 DV L R + A + + LR+ + PH+ + Sbjct: 156 PYGRDVFLERGRLEEFAAAHGPAVGVLAHEALRVEAHRPRLGFE-TDHRTIPHELGW-IG 213 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEI 227 + L KGCY GQE V+R+Q+ +R + + LP G+P+ D ++ Sbjct: 214 TAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPGPGTPVRLAADGPDGRKL 273 Query: 228 GTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 G + G ALA+ R VD + V V+ Sbjct: 274 GFVTTSARHHELGPIALALVKRNVPVDAELIAESTAAAQEVVVEP 318 >gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119870652|ref|YP_940604.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] Length = 356 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 50/295 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L I + + + L QG++ + Sbjct: 38 SHRATLALSGAERRSWLHTISSQHISDQADGTVTQNLSLDGQGRVE-DHWWQTELDGVLY 96 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------------GVVLSWNQ 106 L+ + + + L++ L ++V IE + G + + + Sbjct: 97 LDTEPWRGEPLLNYLRRMVFWADVTIEPADLAVLSLLGPALADTPVLDALGLGSLPAEST 156 Query: 107 EHTFSNSSFID-------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 FI R +AD T + + Y R+ Sbjct: 157 AVALPGGGFIRRLPADGLELDLLVPRAQVADWRDRLTAAGVRP--AGVWAYEAHRVAALQ 214 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTD 211 D PH+ + + + L KGCY GQE V+R+ + + + + GT Sbjct: 215 PRLGVD-TDERTIPHEVGW-IGSAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGTT 272 Query: 212 DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG 261 D P +G P+L +G +G VV G ALA+ V + LT G Sbjct: 273 DRPSTGDPVLAGGRTVGRVGTVVEHIDDGPVALAL-----VKRGLPADTPLTTGG 322 >gi|255577330|ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis] gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative [Ricinus communis] Length = 433 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 104/302 (34%), Gaps = 57/302 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIEED 63 LS+ I+V G I FL TA+ L + +TP + L + I K + Sbjct: 119 LSHFGRIRVSGDDRIQFLHNQSTANFQCLHEGQGCHTVFVTPTARTLDIAHAWIMK---N 175 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN-VIIEI---------------------------- 94 + +L + S+ L Y ++ V I+ Sbjct: 176 SVMLVVSPVTCGSITQMLNKYIFFADNVEIQDITKKTSFFILAGPQSDQVMANLNLGDVV 235 Query: 95 ---------QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 +NG+ ++ + S + S A + +T + + Sbjct: 236 GQPYGTHLHYSVNGMPITVGAGNIISEYGYSLLMSSAAAESVWKTLLSQGAVPMGSNAWE 295 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 +LRI GI P + + +A + N ISL KGCY GQE ++R+ + +++R Sbjct: 296 KLRIIQGIPAPGKELT-NEFNVLEAGL--WNSISLNKGCYKGQETIARLITYDGVKQRLW 352 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMALTV 259 I + GS I D I++G L + L + + +G + V Sbjct: 353 GIHLSAP-AEPGSLITVDGIKVGKLTSYTSGRNKPEHYGLGYIK----RQTVSEGSTVIV 407 Query: 260 HG 261 Sbjct: 408 GD 409 >gi|124516642|gb|EAY58150.1| putative aminomethyltransferase [Leptospirillum rubarum] Length = 334 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 91/286 (31%), Gaps = 54/286 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G+ FLQ I + D+L K S L P+ +IL ED L Sbjct: 27 IFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIALFPPA 85 Query: 72 SKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHT-----------FSNSSF---- 115 R+ ++ L Y R+ I + + T FS SSF Sbjct: 86 GTREEFVNHLKKYLFFRTKAKITDMSDHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145 Query: 116 --------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 ++F L + + D +Y Sbjct: 146 NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSNKGGVLLDESSYLAYLT 205 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GI ++ + FP +A +D + G+S KGCY+GQE V+R++ + + + Sbjct: 206 EKGIPLFPSEL-NDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRL 263 Query: 210 TDDLPPSGS-PIL----TDDIEIGTLGVVVG----KKALAIARIDK 246 P P+ D E G L + + I + Sbjct: 264 EGGPFPKMEFPVTLFNPKDGNEAGILTRTSSSDILGSGIGLGYIKR 309 >gi|308178160|ref|YP_003917566.1| aminomethyltransferase [Arthrobacter arilaitensis Re117] gi|307745623|emb|CBT76595.1| putative aminomethyltransferase [Arthrobacter arilaitensis Re117] Length = 360 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 36/274 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + LS+ +++ G+ +L + + + TL + + +L+ QG+I + Sbjct: 44 AIADLSHFDVVEIRGEDRQSWLDTLSSQRISTLKPGQSTQTLLLSVQGRIEHEMKVLAT- 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120 ED +L + L+ L + V + ++ +GV+ + T + + + Sbjct: 103 EDRLLLIAEPGAGAGLVQFLNSMRFMLRVEVNDLSATHGVLAATRTIDTAGSLIWQNPWP 162 Query: 121 SIADVLLH----------RTW------------GHNEKIASDIKTYHELRINHGIVDPNT 158 I++ R W E+ + + LRI Sbjct: 163 GISEGGWAYSREDHPGKERAWFMHIIELDKLCEAVAEEELAGMMAVEALRIAAWEPRFGA 222 Query: 159 DFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LP 214 + PH+ +D L + + KGCY GQE V+R+ + +R + + LP Sbjct: 223 EI-DDKTIPHE--LDWLRTAVHMDKGCYKGQETVARVHNIGHPPRRMVFLDLDGSMHTLP 279 Query: 215 PSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243 +G+ + + +G + G ALA+ + Sbjct: 280 ATGAEVKLGERTVGRITSATLHYEAGPIALAVIK 313 >gi|156082666|ref|XP_001608817.1| hypothetical protein [Babesia bovis T2Bo] gi|154796067|gb|EDO05249.1| conserved hypothetical protein [Babesia bovis] Length = 324 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLIS 58 M L N+ + + GK ++ FLQ + + DV +L K + L G+IL L+S Sbjct: 3 MICGRLRNRGLLTLSGKDSLSFLQGLTSTDVSSLTKNIKKIFPTLFLGSDGRILSDGLLS 62 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQE 107 + + + +LE +L + + K+ + V I+ + ++ + Q Sbjct: 63 R-DGERILLETASGNIPTLSNLIARRKVSAKVDYSIEKNYSVNAYIPKELLHLIRNGPQG 121 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKT-YHELRINHGIVDP-NTDFLPS 163 T SN+S + +L R + + DI Y +G P + Sbjct: 122 DTVSNTSLQPPDYECDMPILARKYIAYDATNQYRDITEPYRLYLTLNGFALPLPKEVKTL 181 Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + P D + + ++ KGCY+GQE+++R+ Sbjct: 182 KLLPQDMFLHRMGLVAQNKGCYVGQEIMNRV 212 >gi|323359172|ref|YP_004225568.1| aminomethyltransferase [Microbacterium testaceum StLB037] gi|323275543|dbj|BAJ75688.1| predicted aminomethyltransferase [Microbacterium testaceum StLB037] Length = 362 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 106/283 (37%), Gaps = 45/283 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + L ++ I V G+ +L ++ + + L ++ IL PQG++ + + Sbjct: 35 ALAPLGDRRVISVGGEDRRSWLDSLSSQALTHLAPGVSTEMLILDPQGRVEHAASVV-DD 93 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----FID 117 +T L +D + ++L L + R V ++ + + V+ ++ S S+ +ID Sbjct: 94 GETAWLIVDATDIEALAGWLTRMRFRLRVEVKDRSDDLFVVGGTRDAVSSLSAVAPVWID 153 Query: 118 ERFSIADVLLH-----------RTWGHNEKIASD-----------------IKTYHELRI 149 ++ R W A++ + LR+ Sbjct: 154 PWPDVSPGGWAYARVEPHPGADRDWAEAILDAAEFDRVIDAAVRGEVSLAGLDAVEALRV 213 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 D + PH+ MD L + L+KGCY GQE V+++ + +R + + Sbjct: 214 AAWRPRVGVD-ADERLLPHE--MDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRVVALQ 270 Query: 209 GTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 LP G + D IG + V G ALA+ + Sbjct: 271 LDGSDNVLPQRGDEVRVGDAVIGAITSVAVHHEEGPIALALIK 313 >gi|302520798|ref|ZP_07273140.1| glycine cleavage T protein [Streptomyces sp. SPB78] gi|302429693|gb|EFL01509.1| glycine cleavage T protein [Streptomyces sp. SPB78] Length = 326 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 96/275 (34%), Gaps = 17/275 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + +L+ G + + + + Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T L ++ R++L L K V + + V+ + + E Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L RT + A + LR+ + PH+ L + Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+ + +R + + LPP G+P+ D +G Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPDSRVLGF 283 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + L + + + L Sbjct: 284 VTTSARHHELGPIALGLIKRNVPVDAPLLAEETAA 318 >gi|301168528|emb|CBW28118.1| putative aminomethyltransferase [Bacteriovorax marinus SJ] Length = 510 Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 24/252 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ S V G+ F Q T D+++L +A + GKI +FL K + + Sbjct: 19 LSDWSVYCVKGEDREKFFQGQTTNDLMSLNPNEFALNARVDRTGKIQFFFLNIKTSNELY 78 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + +S S I++L + + +V IE N TF + D +F Sbjct: 79 LA-FPKSIAQSAIEELDKFIIMDDVEIEALDK-------NLYFTFLTTEASDNKFEGMLY 130 Query: 126 LLHRTWGHNE------KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + T E +I+++ Y L + +G D + + L DL GIS Sbjct: 131 GVPATLSFEEIDKESKEISNEEIEY--LCVENGWPRWGVDITAGDLINNTRLNDL--GIS 186 Query: 180 LTKGCYIGQEVVSRIQH-RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 TKGC++GQE V++I++ R + + + G +D + G + +G A Sbjct: 187 YTKGCFLGQETVAKIENGRGASFYPSFLTSPSVQKLEIGV-FKINDRKGGEVISKIGNVA 245 Query: 239 LAIA----RIDK 246 + RID Sbjct: 246 MVKLFREFRIDH 257 >gi|72163272|ref|YP_290929.1| hypothetical protein Tfu_2873 [Thermobifida fusca YX] gi|71917004|gb|AAZ56906.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 343 Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 89/279 (31%), Gaps = 24/279 (8%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ ++V G + +L + + + L A + ++ G+I + + + Sbjct: 45 SNRGVVRVSGPDRLGWLHDLTSQHLRELAPGTATETLVMDANGRIKHHLSVV-DDGTALW 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------TFSNSSFI 116 ++ + L+ L + V ++ V++ + + + Sbjct: 104 AHVEPGTAEELVAFLQSMRFMLRVEVDDLSAERAVVTVAGPDRAAVLDAVRDSLPPETVL 163 Query: 117 DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D+ L + + Y RI D H Sbjct: 164 RPAADETDLFLPAAALVEVTEALTAAGARPAGLWAYEARRIAAHRPRFGID-TDHRAIAH 222 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225 + + + + L KGCY GQE V+R+ + +R +++ LP G+ I D Sbjct: 223 EMGW-IGSAVHLDKGCYPGQETVARVHNLGRPPRRLVMLHLDGTAERLPARGADIELDGR 281 Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +G +G L + V + V G+ Sbjct: 282 SVGFVGSSARHFELGPIALGLVKRTVPVDAEFVVDGIAA 320 >gi|32491186|ref|NP_871440.1| hypothetical protein WGLp437 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166393|dbj|BAC24583.1| ygfZ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 309 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 39/265 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LSN +K+ G A+ LQ T++ L + SA +GK++ + + Sbjct: 3 ICLSNLILVKIIGNDALKLLQNQFTSNFFCLKKNEFKFSAHCNEKGKVISNMCVFYYQNK 62 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------- 109 ++ + + I+ L Y V I + ++ S+ Sbjct: 63 ISYIQ-PKIINFNQIEILKKYSTFYKVDIILNKELVLLGSYGTSAEKKIKSIFFEIPNEK 121 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGI 153 + + + + +F L+ E I +K + +++ + + Sbjct: 122 NKVINYKDCAILYFKFKNPFYLIIINKRKREDIFYKLKLNNTFYNYKKYLFEIIKLKYPV 181 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 ++P FP + ++ + I KGCY+GQE++ ++Q+ I +K I+ G Sbjct: 182 IEP---ITSEHFFPQEINLNYFHAIDFNKGCYMGQELIYKMQYLKIKKKFLYILYGKSSF 238 Query: 214 PPSGSPILTDDIE-----IGTLGVV 233 P I+ + G + V Sbjct: 239 LPKAGDIIEQKMINKWNFAGKILSV 263 >gi|254569948|ref|XP_002492084.1| Mitochondrial matrix protein [Pichia pastoris GS115] gi|238031881|emb|CAY69804.1| Mitochondrial matrix protein [Pichia pastoris GS115] gi|328351426|emb|CCA37825.1| Putative transferase CAF17, mitochondrial [Pichia pastoris CBS 7435] Length = 476 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 126/443 (28%), Gaps = 178/443 (40%) Query: 8 NQSFIKVCGKSAIPFLQAII----------------TA-DVL---------TLPYKI--- 38 ++ FI+V G + FL +I T D+ L + Sbjct: 28 DKGFIQVQGPDSTEFLNGLITTMLLPTFTKKNQHTITNKDLQLEGILAKQIQLTPEEIKE 87 Query: 39 -------------------------ARGSAILTPQGKILLYFLISKIE---------EDT 64 + L +G++ I E + Sbjct: 88 TNWGILHEDSYLSDEDPMKLGIRRDGLYTLFLNSRGRVFSDAFIYPTPLIMEDSDTSEPS 147 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNSS 114 +++E+D + L + +KL + + + + + +E +TF N++ Sbjct: 148 YLVEVDHKITNQLFMMMNMHKLTAKIKLTKPELKSWYIYSEKEIFENYIYKIQNTFFNNA 207 Query: 115 --------------------------------FIDERFSIADV-LLHRTWGHNEKI---- 137 ID R + L+ T ++ Sbjct: 208 TSTDPETANISMQEFIRSRALLDSYSDDVKGFAIDNRSPYFGLKLVTGTALELSQLSPLR 267 Query: 138 -------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 AS+ Y RI +GIV+P + ++ P + +D NGIS KGCY+GQE+ Sbjct: 268 NLDEIHMASNSSEYKLRRIINGIVEPADLDMEHSVLPFELNVDFTNGISFEKGCYVGQEL 327 Query: 191 VSRIQHRNIIRKRPMII----------------------------------------TGT 210 +R IIRKR M I Sbjct: 328 TTRTYTTGIIRKRIMPIKLYDLTTIDKESLKDTISIEGDNFEPLLKSCRDIKIINENESE 387 Query: 211 DDLPPSGSPILTD--------------DIEIGTLGVVVGKKALAIARIDKVDHAIKKG-- 254 + P +P T E+G L + LA+ + + G Sbjct: 388 AEQPQEETPFATSPFGNSPTKRASKRKRSEVGKLLHMEKNIGLALVNLKHITPDNSIGHN 447 Query: 255 ---MALTVHG--VRVKASFPHWY 272 + V G + VK P W+ Sbjct: 448 EFILDTKVDGKTIGVKVFIPDWW 470 >gi|318059665|ref|ZP_07978388.1| hypothetical protein SSA3_17091 [Streptomyces sp. SA3_actG] gi|318077222|ref|ZP_07984554.1| hypothetical protein SSA3_10983 [Streptomyces sp. SA3_actF] Length = 326 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 96/275 (34%), Gaps = 17/275 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + +L+ G + + + + Sbjct: 47 VDLSHRGVLAVEGPERLAWLHLLLTQHVSALPAGQATEALVLSANGHVEHHLSLV-DDGT 105 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121 T L ++ R++L L K V + + V+ + + E Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L RT + A + LR+ + PH+ L + Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+ + +R + + LPP G+P+ + +G Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPESRVLGF 283 Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + L + + + L Sbjct: 284 VTTSARHHELGPIALGLIKRNVPVDAPLLAEETAA 318 >gi|289164835|ref|YP_003454973.1| Hypothetical protein similar to glycine cleavage T protein [Legionella longbeachae NSW150] gi|288858008|emb|CBJ11868.1| Hypothetical protein similar to glycine cleavage T protein [Legionella longbeachae NSW150] Length = 336 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 28/224 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + V G A+ FLQ +T D+ ++ A +G+IL I Sbjct: 41 LSYLAVLDVDGAKALDFLQGQLTCDIHSISDIKMLQGAQCNLKGRILSLMDIVSWHG--V 98 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123 L + + I+ L L S + ++ + N + N F + Sbjct: 99 KLVLPNDLIEPTINSLNKTALLSRISLKTNDQLSIFGFYLQNDQDIIPNIKFFPDPHCAQ 158 Query: 124 DVLLHRTWGHNEK------IASDIK-----------------TYHELRINHGIVDPNTDF 160 + + H I SD T+H LR+ ++ Sbjct: 159 TYNDYSCFYHLGNGFYILLIQSDFAHDIKQYFTDKSQILGSLTWHTLRLAQKQIEIYPS- 217 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 PH + + IS KGCY GQE+++R+ ++ ++ + Sbjct: 218 SRGLFLPHRLDLHQTHYISFNKGCYKGQEIIARMHYKGTLKHQL 261 >gi|270156718|ref|ZP_06185375.1| putative glycine cleavage T protein [Legionella longbeachae D-4968] gi|269988743|gb|EEZ94997.1| putative glycine cleavage T protein [Legionella longbeachae D-4968] Length = 332 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 28/224 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + V G A+ FLQ +T D+ ++ A +G+IL I Sbjct: 37 LSYLAVLDVDGAKALDFLQGQLTCDIHSISDIKMLQGAQCNLKGRILSLMDIVSWHG--V 94 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123 L + + I+ L L S + ++ + N + N F + Sbjct: 95 KLVLPNDLIEPTINSLNKTALLSRISLKTNDQLSIFGFYLQNDQDIIPNIKFFPDPHCAQ 154 Query: 124 DVLLHRTWGHNEK------IASDIK-----------------TYHELRINHGIVDPNTDF 160 + + H I SD T+H LR+ ++ Sbjct: 155 TYNDYSCFYHLGNGFYILLIQSDFAHDIKQYFTDKSQILGSLTWHTLRLAQKQIEIYPS- 213 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 PH + + IS KGCY GQE+++R+ ++ ++ + Sbjct: 214 SRGLFLPHRLDLHQTHYISFNKGCYKGQEIIARMHYKGTLKHQL 257 >gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] gi|119958875|gb|ABM15880.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] Length = 361 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 99/292 (33%), Gaps = 40/292 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L I + V L + L QG++ + + + Sbjct: 39 SHRAVLSLTGAERNSWLHTISSQHVSDLADGTVTENLSLDGQGRVE-DHWVQTQLDGRTV 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------SSFIDER 119 L+ + + + L+ L ++V++E + GV+ T + Sbjct: 98 LDTEPWRGEPLLSFLRKMVFWADVVVEPADL-GVLSLLGPGLTDPAVLDAVGLPALPAPN 156 Query: 120 FSI---ADVLLHRTWGHNEKI----------------------ASDIKTYHELRINHGIV 154 ++ + R G ++ + + Y R+ Sbjct: 157 SAVELPGGGFIRRLPGPAVEVDVVVPRDELAAWRDRLVAAGVRPAGVWAYEAHRVAARRP 216 Query: 155 DPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--G 209 D PH+ + + L KGCY GQE V+R+ + + +++ G Sbjct: 217 RLGVD-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDG 275 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 D P +G P+L +G LG VV + + + + ALT G Sbjct: 276 ASDRPSTGDPLLAGGRTVGRLGTVVDHVDEGVIALALLKRGLPADTALTTGG 327 >gi|326384540|ref|ZP_08206219.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395] gi|326196674|gb|EGD53869.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395] Length = 390 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 106/307 (34%), Gaps = 59/307 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ I++ G + +L I + + L + + + L G+I +F+++ I+E T Sbjct: 50 SDRAVIELSGPERLTWLHTISSQHLTHLADRRSAENLSLDGNGRIEDHFVLTDIDETT-W 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 ++ + S+ SL D L + V +P V+ + + Sbjct: 109 IDTEASRGQSLADFLTKMVFWAKVTPTARPDMAVLTLLGPDALTGPIAEIIALPSDAMPY 168 Query: 115 -------------------------------FIDERFSIADVL-LHRTWGHNEKIASDIK 142 +D D+ R + + Sbjct: 169 QAGDLPELRHDDEPLGFWRVMPGIGEHGATPVVDLVVPEPDLREWWRLLTDAGAAPAGMW 228 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRN 198 Y LR+N + D PH+ D + L KGCY GQE V+R+ + Sbjct: 229 AYEALRVNALRPRLHLD-TDERTIPHEVDWIGGPDEGGAVHLDKGCYRGQETVARVANLG 287 Query: 199 IIRKRPMIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDH 249 +R +++ P +G + +G +G V+ G ALA+ R VD Sbjct: 288 RPPRRLVLLHLDGSSAYRPITGVAVTAGGRTVGRVGTVIDHFENGPIALALVKRNVPVDA 347 Query: 250 AIKKGMA 256 + G A Sbjct: 348 ELVVGDA 354 >gi|40063065|gb|AAR37921.1| conserved domain protein [uncultured marine bacterium 560] Length = 229 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 18/230 (7%) Query: 41 GSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100 +A QGKIL F + + D ++ DS+ +L + L S+VII + Sbjct: 1 MNAYCQHQGKILALFWVMRSGND-LLISFPLDLLDSIKSRLQMFVLMSDVIITDVTKQFL 59 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 + + +S I+E+ S+ + + + + D + + I+ + + + Sbjct: 60 QIG-AINISQKDSLTINEQLSLI-LTGPKNLSKFDLTSQD--HWDKACIDSFLPEVSI-A 114 Query: 161 LPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 T P +D+ G++ +KGC+ GQEVV+R+ + ++R L + + Sbjct: 115 STETYIPQMLNLDINEVGVNFSKGCFPGQEVVARLHYLGKAKRRLFAFKSDFPLSINDTL 174 Query: 220 ILTDDIEIGTLGVVVGKK-------ALAIARIDKVDHAI----KKGMALT 258 + G VV + LA ++ D+ I +G LT Sbjct: 175 HCAESKSAKASGSVVSQVKFGSDFYCLATLEVENKDNKITINNDQGPTLT 224 >gi|237785004|ref|YP_002905709.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM 44385] gi|237757916|gb|ACR17166.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM 44385] Length = 448 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 102/323 (31%), Gaps = 71/323 (21%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60 +V S+Q +++ G + +L ++I+ + L IL +G I F I + Sbjct: 77 AVDRSHQRVLQISGADTLSWLNSLISQKIDALSPGSTTHGLILDAKGHIEHAFTIVRPQA 136 Query: 61 ------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----------GVVLS 103 E+ + L D+L L S V + + V + Sbjct: 137 SLPDRDEDPSIYLISGPDTFDALQTYLTQMVFWSAVSVHEADLALITVIGPDTSTVVAHT 196 Query: 104 WNQEHTFSNSSFIDERFSIAD-----------------VLLHR--------TWGHNEKIA 138 H S + ++ + +L+ R T Sbjct: 197 LEDHHATSTLAATTPPDTLPEETITFTDPLVGTENSVHLLVPRPVLTDAFTTLIKAGAKP 256 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHD--------ALMDLLNG----------ISL 180 + + Y RI I + + D PH+ A + L Sbjct: 257 TGLMAYEAERIKAVIPEVHADL-DDRTVPHEIDSFIGTPANAPTQRATADDGPTVSYVHL 315 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234 KGCY GQE VSRIQ+ + + + P G I + ++G +G VV Sbjct: 316 NKGCYRGQETVSRIQNLGRPPRLLVKLQVDGYSARRPEPGEAITSGKRKVGRIGTVVDDC 375 Query: 235 --GKKALAIARIDKVDHAIKKGM 255 G AL + + V+ I G Sbjct: 376 DEGPIALGLVKRSIVEKLIGSGA 398 >gi|229489142|ref|ZP_04383008.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121] gi|229324646|gb|EEN90401.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121] Length = 373 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 89/294 (30%), Gaps = 44/294 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G + +L I + + LP + + L G++ +F+ + + T Sbjct: 54 SHRFVIAIPGDERLTWLHTISSQHIAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107 ++ + ++ L+ L S V+ E Sbjct: 113 IDTEANRGPDLLSFLKKMVFWSKAEPRDGNELAVLSLIGPEASTVLAALEVQTPTEAYDA 172 Query: 108 HTFSNSSFID--------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 H ++ FI R +A + + LR+ Sbjct: 173 HALADGGFIRRMPWPTENSFDLLVPREQLA--AWWTRLTDAGAKPAGSWAFEALRVEATR 230 Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 231 PRLGLD-TDERTIPHEVHWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHL 289 Query: 210 TD---DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 +P G PI +G +G VV L + + I L Sbjct: 290 DGSAEAVPEPGDPITAGGRAVGRVGTVVNHHELGPIALALIKRNIPVDTELMAG 343 >gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c] gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c] Length = 393 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 62/296 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ ++V G + +L ++ + + L + +L+P G + + L+ + + Sbjct: 60 SHRGVVRVTGPDRLTWLHSLTSQHLSALRPLRGTEALLLSPHGHVEHH-LVLADDGQATL 118 Query: 67 LEI----DRSKRDSLIDKLL---FYKLR---SNVIIEIQ-------------------PI 97 +++ D S + + L + LR ++V Sbjct: 119 IDVEPAGDASSGAVALTRFLESMRFLLRVEPADVTAATAVLSLVGPQAAATVAQALGADA 178 Query: 98 NGVVLSWNQEHTFSNSSFIDE--RFSIA---------------DVLLHRT--------WG 132 V W + E R+ +A D+L+ R+ Sbjct: 179 ADVPADWAAPTGDGAAGLPAEAGRYPVARFGPDVLARRMPYGVDLLIERSGLASVAERLR 238 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 + + + +RI D PH+ L + L KGCY GQE V+ Sbjct: 239 AAGATVAGLDAFEAIRIAAQRPRLGAD-TDHRTIPHEVGW-LTGAVHLDKGCYRGQETVA 296 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243 R+ + +R +++ + GSP+ T ++G +G +G ALA+ + Sbjct: 297 RVHNLGRPPRRLVLLHLDGAVAAPGSPVTTAGRQVGFVGSSRMHAELGPVALAMVK 352 >gi|22299492|ref|NP_682739.1| hypothetical protein tlr1949 [Thermosynechococcus elongatus BP-1] gi|22295675|dbj|BAC09501.1| tlr1949 [Thermosynechococcus elongatus BP-1] Length = 313 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 91/272 (33%), Gaps = 41/272 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + FL + + L L + LT + L + + ++ Sbjct: 18 SHWGRLRLTGGDRLQFLHNQSSNNCLVLQAGQGADTVFLTSTARTL-DLVTLLVHQEWVD 76 Query: 67 LEIDRSKRDSLIDKLLFYKLR-----------------------SNVI--IEIQPI---- 97 L + +R+ L+ L Y + + + P+ Sbjct: 77 LLVSPQRREFLLKWLEKYIFFGDDVQLSDRTPESYCYRVFGSVAAKITAQFGLDPLANPY 136 Query: 98 NGVVLSWNQEHT--FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 + V + + S ++ R SD + LRI G Sbjct: 137 DHVTIPHADAPLTLAATSGLAIPGLTLWSDRPLRDLLSPYPQLSD-ADWEHLRIRQGRPA 195 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + + P +A + + IS KGCYIGQE ++R+ +++ + T + P Sbjct: 196 ADAELT-EEYNPLEARLG--HTISFNKGCYIGQETIARLNTYQGVKQHLWGLELTATVTP 252 Query: 216 SGSPILTDDIEIGTLGVVV----GKKALAIAR 243 +P++ + ++G + G L R Sbjct: 253 P-TPLILEGEKVGLVTSCTPLGKGAFGLGYVR 283 >gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] Length = 376 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 52/301 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ F+ V G+ + +L +I+ V L + +L QG++ + +++ ++ T Sbjct: 49 SHREFLAVTGEDRLSWLHLVISQHVTGLAEGSGTEALVLDSQGRVETHMVLAHLDG-TVY 107 Query: 67 LE----------IDRSKRDSLIDKLLFYKLRSNVII------------------------ 92 L+ + + +L + L K S V I Sbjct: 108 LDTDPGPSVTSALPKGGPQTLREYLEAMKFWSKVDIRDATGELALLTVLGPDAERVLSAV 167 Query: 93 --EIQPINGVVLSWNQEH-----TFSNSSFID---ERFSIADVLLHRTWGHNEKIASDIK 142 E+ P V + + S +D R ++ D + A+ Sbjct: 168 GAEVGPEPYAVAALPGGGFARRMPWPGRSSVDLAVPREALVD--WWKRLTDAGARAAGSW 225 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + LR+ D PH+ + + + KGCY GQE VS++ + + Sbjct: 226 VFDALRVESLRPRLGVD-TDDRTIPHEVGW-VGSAAHVAKGCYRGQETVSKVHNVGRPPR 283 Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 +++ P G P+L D +G +G V+ L + V + G L Sbjct: 284 NLLLLHLDGSPEVTPEPGDPVLLDGRTVGRIGTVIQHHELGPIALALVKRSTPVGAELLA 343 Query: 260 H 260 Sbjct: 344 G 344 >gi|23012287|ref|ZP_00052410.1| COG0354: Predicted aminomethyltransferase related to GcvT [Magnetospirillum magnetotacticum MS-1] Length = 114 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTL 230 MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ + +GT Sbjct: 1 MDQLGGVDFKKGCYVGQEVVSRMQHRGTARTRILPLVYRDGPAPEPGTEVTAGARSLGTT 60 Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 G G LA R+D++ A+ G + G P Sbjct: 61 GSAAGDWGLATIRLDRLGDALAAGEPVRAGGRLAAVGKPD 100 >gi|239918221|ref|YP_002957779.1| glycine cleavage system T protein (aminomethyltransferase) [Micrococcus luteus NCTC 2665] gi|281415587|ref|ZP_06247329.1| glycine cleavage system T protein (aminomethyltransferase) [Micrococcus luteus NCTC 2665] gi|239839428|gb|ACS31225.1| glycine cleavage system T protein (aminomethyltransferase) [Micrococcus luteus NCTC 2665] Length = 398 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 92/297 (30%), Gaps = 58/297 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS+++ + V G + +L + T V LP + L QG+I + + + Sbjct: 52 ALVDLSHRAVLSVSGPDRLSWLHTLGTQHVEALPPGTSTEILFLDVQGRIEHAAHLLE-D 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDERF 120 L DR L L + +V + VV + + + + + + Sbjct: 111 GAAAWLVTDREDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPW 170 Query: 121 SIADVLLHRTWGHNEKIASDIKTY-----------------------------------H 145 + A + Sbjct: 171 PRVGAGGWAYTADPDPEAHPGADWAWREYLVTRADLEATVRALGTGALAGWSLAGTTAAE 230 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LRI G D + PH+ + L + L KGCY GQE V+R+ + +R Sbjct: 231 ALRIEAGRPRRALD-VDDRAIPHELDL-LRTAVHLDKGCYRGQETVARVHNLGRPPRRLT 288 Query: 206 IITGTD---DLPPSGSPIL-----------TDDIEIGTLGVV-----VGKKALAIAR 243 + LP G+P++ +GT+ G ALA+ + Sbjct: 289 RLLLDGSVHGLPEHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLK 345 >gi|226308307|ref|YP_002768267.1| hypothetical protein RER_48200 [Rhodococcus erythropolis PR4] gi|226187424|dbj|BAH35528.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 373 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 86/294 (29%), Gaps = 44/294 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G + +L I + + LP + + L G++ +F+ + + T Sbjct: 54 SHRFVIAIPGDERLTWLHTISSQHIAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 ++ + + L+ L S V+ E S+ Sbjct: 113 IDTEADRGPDLLSFLKKMVFWSKAEPRDGNELAVLSLVGPESPAVLSAIGVQTPTDAYDA 172 Query: 115 ---------------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 + R +A + + LR+ Sbjct: 173 LALADGGFVRRMPWPTEDSFDLLVPREQLA--AWWTKLTDAGAKPAGSWAFEALRVEARR 230 Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 231 PRLGLD-TDERTIPHEVHWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHL 289 Query: 210 TD---DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 +P G PI +G +G VV L + + I L Sbjct: 290 DGSAEAVPEPGDPITAGGRAVGRVGTVVNHHELGPIALALIKRNIPVDTELMAG 343 >gi|289705058|ref|ZP_06501469.1| folate-binding protein YgfZ [Micrococcus luteus SK58] gi|289558221|gb|EFD51501.1| folate-binding protein YgfZ [Micrococcus luteus SK58] Length = 398 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 93/297 (31%), Gaps = 58/297 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS+++ + V G + +L + T V TLP + L QG+I + + + Sbjct: 52 ALVDLSHRAVLSVSGPDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLE-D 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDERF 120 L DR L L + +V + VV + + + + + + Sbjct: 111 GAAAWLVTDREDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPW 170 Query: 121 SIADVLLHRTWGHNEKIASDIKTY-----------------------------------H 145 + A + Sbjct: 171 PRVGAGGWAYTADPDPEAHPGADWAWREYLVTRADLEATARALGTGALAGWSLAGTTAAE 230 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LRI G D + PH+ + L + L KGCY GQE V+R+ + +R Sbjct: 231 ALRIEAGRPRRALD-VDDRAIPHELDL-LRTAVHLEKGCYRGQETVARVHNLGRPPRRLT 288 Query: 206 IITGTD---DLPPSGSPIL-----------TDDIEIGTLGVV-----VGKKALAIAR 243 + LP G+P++ +GT+ G ALA+ + Sbjct: 289 RLLLDGSVHALPEHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLK 345 >gi|71032799|ref|XP_766041.1| hypothetical protein [Theileria parva strain Muguga] gi|68352998|gb|EAN33758.1| hypothetical protein TP01_0521 [Theileria parva] Length = 348 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 33/241 (13%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+N+ I++ G+ + FLQ +I++D+ + R + L+ QG I+ LI E D Sbjct: 3 RLNNRVIIRLFGQDSFNFLQGLISSDLRLVKADETRPALFLSAQGHIVAESLIFTHEGD- 61 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------HTFSNSSFI 116 + L+ + + +++ + KL S V + V + + E T N + I Sbjct: 62 YYLDSLKINHNKILNIINKRKLASKVQTDTTESEVYVSTLDSEFYTHFKPGKTKENKNLI 121 Query: 117 DERFSIADVLLHRTW--------------------GHNEKIASDIKTYHELRINHG---- 152 + + HR + + +K ++ Y +L + + Sbjct: 122 KLLDTRNRLFGHRYYWISNNTVCGLDQVESNKLGNNNLDKNQENLSVYDKLLLMNNYLMD 181 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ F + P D + N IS KGCY+GQE+++RI ++ +I K + I +DD Sbjct: 182 LMMNEDGFEKYKLMPFDLNLQNFNYISSDKGCYVGQEIINRINNKVLINKYKLYIAVSDD 241 Query: 213 L 213 L Sbjct: 242 L 242 >gi|256831685|ref|YP_003160412.1| folate-binding protein YgfZ [Jonesia denitrificans DSM 20603] gi|256685216|gb|ACV08109.1| folate-binding protein YgfZ [Jonesia denitrificans DSM 20603] Length = 389 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 56/306 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G +L +I + ++ TL + + +++P+G + + + DT Sbjct: 57 SHLHIIAVTGPDRRSWLNSITSQELTTLAPRTSTELLVMSPKGHLEHSAAVV-DDGDTTW 115 Query: 67 LEIDRSKRDSLIDKLL--FYKLR---SNVI---------IEIQPINGVVLSWNQEHTF-- 110 L + S L L + +R S+V I + +G L+WN Sbjct: 116 LITEPSHAHDLTTWLDSMRFAMRVTVSDVTDQWALLGEAINAESQDGEPLAWNDPWPTVL 175 Query: 111 ------------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + R +AD + R H+ + +RI Sbjct: 176 DGGTRYGPDAPDHAGTDRPWRLVLIPRTDLADEIRQRQ--HSGWTLAGTWATEAIRIAAW 233 Query: 153 IVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 T+ + PH+ +D L + L KGCY GQE ++R+ + +R +++ Sbjct: 234 RPRLATE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETIARVHNLGRPPRRLVMLHLDG 290 Query: 212 D---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTV--HG 261 +P G+P+ + +IG + V G ALA+ + A ALTV G Sbjct: 291 SGHFIPEPGAPVHLEGRDIGHVTSVARHHDNGPIALAVIK-----RATPDDAALTVVCDG 345 Query: 262 VRVKAS 267 V A+ Sbjct: 346 GDVTAA 351 >gi|333025477|ref|ZP_08453541.1| hypothetical protein STTU_2981 [Streptomyces sp. Tu6071] gi|332745329|gb|EGJ75770.1| hypothetical protein STTU_2981 [Streptomyces sp. Tu6071] Length = 326 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 22/259 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ + V G + +L ++T V LP A + +L+ G + + + + Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFIDERFS 121 T L ++ R++L L K V + + V+ + + E Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165 Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L RT + A + LR+ + PH+ L + Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229 + L KGCY GQE V+R+ + +R + + LPP G+P+ + +G Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPESRVLGF 283 Query: 230 LGVVV-----GKKALAIAR 243 + G AL + + Sbjct: 284 VTTSARHHELGPIALGLIK 302 >gi|283457493|ref|YP_003362073.1| putative aminomethyltransferase [Rothia mucilaginosa DY-18] gi|283133488|dbj|BAI64253.1| predicted aminomethyltransferase related to GcvT [Rothia mucilaginosa DY-18] Length = 424 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 51/285 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G +L +I + + + +R +L+PQG++ + + + Sbjct: 86 SSLGVVRVEGPDRQTWLTSIASQILTGMTAGESREFLLLSPQGRVEYAPAAIE-DGEALW 144 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 L ++ + L D L K V ++ VL + + S Sbjct: 145 LIVEGYQAQPLTDYLNRMKFMMRVEVQNLSDEYAVLESARNPILQDGSVYPALAETKPLV 204 Query: 115 FIDERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELR 148 + D + A +L ++ + + LR Sbjct: 205 WEDPWHTPAPGSYRYDEAGDAHPGADYVRFLSIVPRSVLPALAESSDARFAGLWAAEALR 264 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I T+ P + + KGCY GQE V+R+ + +R + + Sbjct: 265 IEAWRPRYGTE-ADDKTIPQELDYTRT-AVHFDKGCYKGQETVARVHNLGRPPRRLVFLD 322 Query: 209 GTDD---LPPSGSPILTDDI--EIGTLGVV-----VGKKALAIAR 243 LP +GS + + +G + V G ALA+ + Sbjct: 323 IDGSEHTLPAAGSELFVEGKSRPVGRITSVALHHEAGPIALAVIK 367 >gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] Length = 368 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 109/301 (36%), Gaps = 41/301 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G + +L +++T + L + + L+P G + + +++++ T Sbjct: 45 SDRDVLVVPGADRLTWLHSLLTQHLEQLGDGVGAEALELSPNGHVEHHLVLAELAGST-W 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFIDERFSIA 123 ++++ +L L + V + +LS + + + A Sbjct: 104 VDVEPGTGAALQTYLERMRFLLRVEPALVTGAWALLSLAGPRGDEVLAAAGLPVPALPYA 163 Query: 124 -----------------------DVLLHR--------TWGHNEKIASDIKTYHELRINHG 152 D+L+ R + + Y LR+ Sbjct: 164 VLALDGGGWVRRMPPIGDGAPVVDLLVPRGELAARADALLAAGAAPAGVDAYEALRVEAR 223 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211 D P++ L + + L KGCY GQE V+R+ + +R +++ Sbjct: 224 RPRLGVD-TDHRTIPNETGW-LTSAVHLAKGCYRGQETVARVHNLGRPPRRLVLLHLDGL 281 Query: 212 --DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LP +G+P+ ++G +G VV L + + V ++ LTV G R A P Sbjct: 282 AEQLPEAGTPVQLGARDVGRVGSVVRHHELGVVALALVKQSVAMDAELTVAGARA-AIDP 340 Query: 270 H 270 Sbjct: 341 D 341 >gi|254499306|ref|ZP_05111978.1| aminomethyltransferase [Legionella drancourtii LLAP12] gi|254351461|gb|EET10324.1| aminomethyltransferase [Legionella drancourtii LLAP12] Length = 322 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 28/224 (12%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ + + G+ AI FLQ +T +V ++ A +G+IL I + Sbjct: 36 LAHLGVLDILGEKAIEFLQGQLTCNVQSISDIQIIQGAQCNLKGRILALMDIINWQG--I 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123 L + + ++ I L L S V + V+ N + ++SF + Sbjct: 94 KLVLPKDLMEATIKSLNKTALLSRVALSENNELCVLGFYLQNPKDLVPDTSFFTDNLYGL 153 Query: 124 DV--------LLHRTWGHNEKIASDIK---------------TYHELRINHGIVDPNTDF 160 L H + + K T+H LR+ + + Sbjct: 154 TYGSQYCCYHLGHGFYIFLAQAEFAKKVSLHFAEKNQLLGSLTWHSLRLAKQQITIYPE- 212 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 PH + +S KGCY GQE+++R+ ++ I+ + Sbjct: 213 SRGLFLPHRIDLHQTPYLSFNKGCYKGQEIIARMHYKATIKHQL 256 >gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a] gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a] Length = 363 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 108/310 (34%), Gaps = 50/310 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V S++ +++ G + +L +I + + L + +L+PQG + + L+ + Sbjct: 29 ALVDRSHREVVRIGGPDRLSWLHSITSQHLSGLGALRGSEALVLSPQGHVEHH-LVLADD 87 Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR---SNVIIEIQPINGVVLS------------- 103 ++++ L+ L + LR ++V ++ V + Sbjct: 88 GTATWVDVEPGTAAGLLRYLESMRFLLRVEPADVSARTAVLSVVGPAAVPTVAAALGGAD 147 Query: 104 ------WNQEHTFSNSSFIDERFSIADVLLHRT--------------------WGHNEKI 137 E T + + AD L R + Sbjct: 148 LDLPEPLALEPTGAPVTGPYPVARAADGTLVRRMAYGVDLLVDRATLAATAQRLLAAGAV 207 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + + + LRI + PH+ L + + L KGCY GQE V+R+ + Sbjct: 208 PAGLSAFDALRIAARRPRLGRE-TDHRTIPHEVGW-LADAVHLDKGCYRGQETVARVHNL 265 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 +R +++ + GS + D E+G +G + L + V ++ G AL Sbjct: 266 GRPPRRLVLLHLDGTVAAPGSAVTADGREVGFVGTSEMHEELGPIALAIVKRSVPAGAAL 325 Query: 258 TV---HGVRV 264 V G V Sbjct: 326 VVTDPDGAPV 335 >gi|113478071|ref|YP_724132.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium erythraeum IMS101] gi|110169119|gb|ABG53659.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium erythraeum IMS101] Length = 349 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 53/300 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ + FL T + L + + +TP + + + + E Sbjct: 44 SHWGLIQISDDERLRFLHNQSTNNFNILQPGQSCETVFVTPTARTI-DLATAYVTESLVF 102 Query: 67 LEIDRSKRDSLIDKLLFYKLR--SNVIIEIQPINGVVLSW-------------------- 104 L + S+ L++ Y L V ++ + S Sbjct: 103 LLVSPSRCQKLVEWFDRY-LFPMDKVEVKDVSSEYAIFSLIGIEGKNLIAKLGATTPSDI 161 Query: 105 -NQEHTFSNSSFIDERFSIADVL----------------LHRTWGHNEKIASDIKTYHEL 147 + H + ++ R ++ L + + + + +L Sbjct: 162 THASHQLISLKNLEVRVAVGSGLTKEGYTLIVPVNNAAEVWQMLVEAGATPMGDRLWQQL 221 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI G P+ + P +A + N IS KGCYIGQE ++R+ +++R + Sbjct: 222 RIEQGRPAPDYELT-DDYNPLEAGL--WNTISFEKGCYIGQETIARLNTYKGVKQRLWGV 278 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + G+ + D ++G L G LA + A G+ + V V Sbjct: 279 RLNGKV-ELGNVVQIGDKKVGKLTSFTETNEGYFGLAYIKT----KAGGVGLKVQVGDVE 333 >gi|206603597|gb|EDZ40077.1| Putative aminomethyltransferase [Leptospirillum sp. Group II '5-way CG'] Length = 334 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 88/285 (30%), Gaps = 56/285 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ FLQ I + D+L K S L P+ +IL ED L Sbjct: 27 IFIEGEDRKTFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIGLFPPA 85 Query: 72 SKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHT-----------FSNSSF---- 115 R+ I+ L Y R+ I + + T FS SSF Sbjct: 86 GTREEFINHLKKYLFFRTKAKITDMSEHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145 Query: 116 --------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 ++F L + +Y Sbjct: 146 NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSKKGGVLLSESSYLTYLT 205 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 GI ++ + FP +A +D + G+S KGCY+GQE V+R++ + + + + Sbjct: 206 EKGIPLFPSEL-NDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFSL 263 Query: 210 TDDLPPSGS-PIL----TDDIEIGTLGVVV------GKKALAIAR 243 P P+ D E G L L + Sbjct: 264 EGAAFPKMEFPVTLFNPKDGNEAGILTRTSFSDILGSGIGLGYLK 308 >gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c [Mycobacterium abscessus ATCC 19977] gi|169239798|emb|CAM60826.1| Conserved hypothetical protein (glycine cleavage T-protein aminomethyl transferase?) [Mycobacterium abscessus] Length = 364 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 99/305 (32%), Gaps = 42/305 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + S ++ + + G + +L + + V L + R + L QG++ + + Sbjct: 35 LIDRSTRAVLALSGPERLSWLHTVSSQHVADLRHGQTRENLSLDGQGRVE-DHWVQTDLD 93 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116 L+ + + L D L S V + + L + I Sbjct: 94 GITYLDTESWRGQPLKDFLTKMVFWSKVEVAAADLKVFTLLGPDTAGLAEKLGIAALPEL 153 Query: 117 DERFSIADVLLHR--TWGHNEKI------------------ASDIKTYHELRINHGIVDP 156 D ++ D L R W E + + + LR+ Sbjct: 154 DNAVALPDGGLIRRVPWPLAEATYDLLVPSGKGLAERLGVRPAGLWAFEALRVAATRPRL 213 Query: 157 NTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210 D PH+ D + L KGCY GQE V+R+ + + +++ G+ Sbjct: 214 TLD-TDERTIPHEVGWIAIGDDPRAVHLAKGCYRGQETVARVHNLGKPPRALVLLHLDGS 272 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG--MALTVHGVR 263 D P G + +G +G VV G ALA+ + V A+ G LT Sbjct: 273 ADRPAPGDEVAAAGRAVGRVGSVVDHVDLGPIALALVK-RSVIEALANGNPAPLTAGPSP 331 Query: 264 VKASF 268 Sbjct: 332 AAVDL 336 >gi|298491650|ref|YP_003721827.1| folate-binding protein YgfZ ['Nostoc azollae' 0708] gi|298233568|gb|ADI64704.1| folate-binding protein YgfZ ['Nostoc azollae' 0708] Length = 326 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 95/304 (31%), Gaps = 52/304 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V + FL T D L + ++T + + + + +D Sbjct: 27 SEWGIIRVADDDRLRFLHNQSTNDFQRLKPGEGCDTVMVTSTARTI-DLVTGYVLDDAVF 85 Query: 67 LEIDRSKRDSLIDKLLFYKLR----------------------SNVIIEIQP-------- 96 L + +R L+ L Y S+ +IE Sbjct: 86 LLVSPGRRHFLLQWLDRYIFFTDKVQLTDITEDTGTFSLIGPGSDAMIEKLGAGSLIGQP 145 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKTYHELRI 149 ++G+ ++ + I F IA + + + + LRI Sbjct: 146 YGSHILVDGLRVAVGSGLALPGYTLI---FPIAQKQKIWEQILEYGGLELSDRGWEMLRI 202 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G P+ + P + + +S KGCYIGQE ++R+ +++ I Sbjct: 203 LQGRPAPDLELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQYLWGIRL 259 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + P + I D ++G L G L R +K + T V Sbjct: 260 NAPVEPE-TIITIGDEKVGKLTSYTETPDGHFGLGYIRSKAGGVGLKVQVGETAGEV--- 315 Query: 266 ASFP 269 S P Sbjct: 316 VSIP 319 >gi|220907953|ref|YP_002483264.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425] gi|219864564|gb|ACL44903.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425] Length = 325 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 51/297 (17%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V + FL T + L + I+ + L + + + ED IL Sbjct: 22 WGRIQVTNSDRLAFLHNQSTNEFKLLKPGQGCDTVIVNSTARTL-DLVTAYVTEDAVILL 80 Query: 69 IDRSKRDSLIDKLLFYKLR-SNVIIE-----------IQPINGVVLSWNQEHTFSNSSFI 116 + KRD L+ L Y V + I P + +L+ T + + Sbjct: 81 VSPQKRDFLLKWLDRYIFFGDKVKLTDITAVTAAFSLIGPQSSALLTELGVETSTLGRYG 140 Query: 117 DERFSIADVLLHRT--------------------------WGHNEKIASDIKTYHELRIN 150 D + R I+ D + +LR++ Sbjct: 141 DHLLCELAGMPVRVVLGSGLALPGYTLLTDAEHAGNLNDQLIAAGAISLDETAWQQLRLH 200 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G + + P +A + + IS KGCYIGQE ++R+ ++++ I + Sbjct: 201 QGRPQADAELT-EDYNPLEAGL--WHTISFNKGCYIGQETIARLNTYQGVKQQLWGIQLS 257 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVR 263 L +G+ I + +IG L + G L + A G+A+ + Sbjct: 258 T-LVAAGTTITQEGNKIGLLTSAILTPEGPFGLGYVKT----KAGGAGLAVEIGDAT 309 >gi|319442498|ref|ZP_07991654.1| putative aminomethyltransferase [Corynebacterium variabile DSM 44702] Length = 394 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 107/318 (33%), Gaps = 59/318 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64 ++ + V G+ A +L I+ V A +L QG++ F IS ++ D Sbjct: 57 DRVALLVTGEEARSWLNGFISQKVDAAQPGTATDGLLLDAQGRVEQEFGISVVDLDGSPA 116 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPIN-GVVLSWNQEHTF 110 ++++ D+L D L + V I E P G + Sbjct: 117 VLMDVAADHADALEDFLRRMVFWARVEISRPELTRLSLLGREADPDFPGPGHAGTATPLA 176 Query: 111 SNSSFIDERF-----------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 ++ F R + D L+ A D + R G+ Sbjct: 177 PSADFWRTRVTSGVPVTDLWVPRSELKPVWDALVETGARPTGGAAVDAWRLRDRRPVLGV 236 Query: 154 VDPNTDFLPSTI-FPHDALMDLL------------NGISLTKGCYIGQEVVSRIQHRNII 200 D + +P + A +D + + L KGCY GQE VSR+ + Sbjct: 237 -DTDDRLIPHEVPAWIGAGIDGATRLADATEGPTGSAVHLNKGCYRGQETVSRVHNLGRP 295 Query: 201 RKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIK 252 + +++ LP G+ + +G +G V G ALA+ + V A+ Sbjct: 296 PRLLVLLQLDGSAGRLPDIGADVTAGGRTVGRMGTPVQDADYGPVALALVK-RAVVEAVA 354 Query: 253 KG--MALTVHGVRVKASF 268 +G L V GV Sbjct: 355 EGTAPPLQVDGVDAAIDR 372 >gi|317968602|ref|ZP_07969992.1| hypothetical protein SCB02_03593 [Synechococcus sp. CB0205] Length = 286 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 97/281 (34%), Gaps = 41/281 (14%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-----------LYFLIS 58 S I++ G FL + + + +++P ++ ++ Sbjct: 12 SLIRLEGSDTRRFLHGQSSQAIELAKAGDCLPTCLISPTARMRGLALVCVDDAGADLIVI 71 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++DR + +L I+P + W + +S + Sbjct: 72 AGNGEAIRADLDRVLFPADNVRL----------GAIEP--ATLWQWQGDAQTEDSVLLRP 119 Query: 119 -----RFSIADVLLHRTWGHNEKIASDIKTY-----HELRINHGIVDPNTDFLPSTIFPH 168 A V+L R+ +D+ + R+ HG+ ++ P Sbjct: 120 GVDLGSGPNAAVVLQRSDEELPPWLADLPEWSGEQVEANRLRHGLPAEPSEL-NDDTNPF 178 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + + +SL KGCY+GQE ++++ + ++++ ++ L P + G Sbjct: 179 ELGLAQW--VSLNKGCYVGQETLAKLATYDGVKQQLRYWESSEALEPGTTLSSAGGERAG 236 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 + G + LA+ R +++ + L G V S P Sbjct: 237 VVTSSQGGRGLALIRRSQLEAST-----LHAGGTEVTISTP 272 >gi|223590165|sp|A5DQ50|CAF17_PICGU RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|190348778|gb|EDK41303.2| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC 6260] Length = 436 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 89/305 (29%), Gaps = 103/305 (33%) Query: 10 SFIKVCGKSAIPFLQAIITA----DVLTLP------------------------------ 35 + I++ G A F+ ++T D++ Sbjct: 13 ALIRIHGPDATKFVNGLVTTRLLPDIVKKKQHTISENENSHQELSQIIDVHRNWGLMHED 72 Query: 36 ----------YKIARGSAILTPQGKILLYFLISKI--------EEDTFILEIDRSKRDSL 77 + S L +G++ I + +++E+D S R L Sbjct: 73 IYDPSNTIYVSRGGINSMFLNSKGRVFTDCFIYAHPFANSSENDHPDYVVEVDESLRTKL 132 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------------------- 114 L +KL + V IE +N F + Sbjct: 133 QMLLKLHKLAAKVNIEKLENVESHYYYNDTPEFDSFLEELQNNYILTKDPSQAREMAQRL 192 Query: 115 ----------------FIDERFSIADV--LLHRTWGHNEKIASDIKTYHE---------- 146 +D R + L + + +S + Sbjct: 193 IDDQAIFGPNIPVVGFAVDNRIPNFGIKFLTKQLQNQDPFSSSFKSQFESPSVSAQDVAV 252 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 R +G+++ +I P + +D NG+SL KGCY+GQE+ R + IRKR + Sbjct: 253 RRYTNGLLEQADVSSDVSILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKRVVP 312 Query: 207 ITGTD 211 + + Sbjct: 313 VQFFE 317 >gi|226364338|ref|YP_002782120.1| hypothetical protein ROP_49280 [Rhodococcus opacus B4] gi|226242827|dbj|BAH53175.1| hypothetical protein [Rhodococcus opacus B4] Length = 373 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 87/282 (30%), Gaps = 49/282 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G + +L I + V LP + + L G++ +F+ + ++ T Sbjct: 54 SHRFVIAISGPERLTWLHTISSQHVAALPDGASAENLSLDVNGRVEHHFVQTDLDGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108 ++ + + L+ L S V+ + Sbjct: 113 IDTEADRGPDLLSFLTKMVFWSKAEPRDGNELAVLNVIGPDAPSVLGAAGVAVPAAPYAA 172 Query: 109 ---------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 T + + R +A + + LR+ Sbjct: 173 VAVAGGGFVRRMPWPTADSFDLLVPREGLATWWGR--LTAAGAAPAGTWAFEALRVAAVR 230 Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 231 PRIGLD-TDDRTIPHEVRWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHL 289 Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 P G P+ +G +G V+ G ALA+ + Sbjct: 290 DGSAEGRPEPGDPVTAGGRAVGRIGTVIDHHELGPIALALVK 331 >gi|255326797|ref|ZP_05367873.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296] gi|255296014|gb|EET75355.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296] Length = 411 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 51/285 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G +L +I + + + +R +L+PQG++ + + + Sbjct: 73 SSLGVVRVEGPDRQTWLTSIASQILTGMTVGESREFLLLSPQGRVEYAPSAIE-DGEALW 131 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 L ++ + L D L K V ++ VL + + S Sbjct: 132 LIVEGYQAQPLTDYLNRMKFMMRVEVQNLSDEYAVLESARNPILQDGSVHPALAEGKPLV 191 Query: 115 FIDERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELR 148 + D + A +L ++ + + LR Sbjct: 192 WEDPWHTPAPGSYRYDEAGDAHPGADYVRFLSIVPRSVLPALAESSDARFAGLWAAEALR 251 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I T+ P + + KGCY GQE V+R+ + +R + + Sbjct: 252 IEAWRPRYGTE-ADDKTIPQELDYTRT-AVHFDKGCYKGQETVARVHNLGRPPRRLVFLD 309 Query: 209 GTDD---LPPSGSPILTDDI--EIGTLGVV-----VGKKALAIAR 243 LP +GS + + +G + V G ALA+ + Sbjct: 310 IDGSEHTLPAAGSELFVEGKSRPVGRITSVALHYEAGPIALAVIK 354 >gi|229821893|ref|YP_002883419.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333] gi|229567806|gb|ACQ81657.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333] Length = 396 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 99/304 (32%), Gaps = 46/304 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS+ + V G + +L + +A + L + +L P G + + + Sbjct: 67 VDLSHLGVVTVAGVDRLTWLDTLSSAWLRDLAPGVGAELLLLDPHGHVEHAAAVV-DDGA 125 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----------VLSWNQEHTFSNS 113 T L + L L + V + ++ V + S QE Sbjct: 126 TTWLVTEADDAAPLAAFLDSMRFTLRVEVAVRDDVAVLGAVGDAARKIASAAQERGALLG 185 Query: 114 SFIDERFSIADVLLHRTWGHNEKIA----------------------------SDIKTYH 145 + D ++ + + A + + Sbjct: 186 VWRDPWPAVVAGGTRYSAESHPGEAFAGAYVLVPWETANEVVDGARQAGELRLAGAWAWE 245 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + + PH+ +D L + L KGCY GQE V+R+ + +R Sbjct: 246 ALRVEARRPRFARE-VDERSIPHE--LDWLRTAVHLDKGCYRGQETVARVFNMGRPPRRL 302 Query: 205 MIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 +++ LP G+ +L + +GTL VV L + V ++ L V G Sbjct: 303 VLLHLDGSEDVLPEPGTEVLAEGRPVGTLTSVVRHHELGPIGLAVVKRSLPLETELVVGG 362 Query: 262 VRVK 265 V Sbjct: 363 VAAS 366 >gi|84999054|ref|XP_954248.1| long-chain-fatty-acid--coa ligase 5 [Theileria annulata] gi|65305246|emb|CAI73571.1| long-chain-fatty-acid--coa ligase 5, putative [Theileria annulata] Length = 1034 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 30/237 (12%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L+N+ K+CG+ + FLQ +I++D+ + + R + L+ QG I+ LI E D Sbjct: 692 RLNNRVVTKLCGQDSFNFLQGLISSDLRLVRAQETRPALFLSSQGHIVAESLIFTHEGD- 750 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQEHTFSNSSFI 116 F L+ + +++ + KL S V + + + E T N FI Sbjct: 751 FYLDSLKVNHSKILNIINKRKLASKVYTKTTESEVYVNTSESDFYSHFQTEKTKENKDFI 810 Query: 117 DERFSIADVLLHRTW-----------------GHNEKIASDIKTYH-ELRINHGIVD--- 155 + HR + + EK ++ Y L +N+ ++D Sbjct: 811 KLLDTRNQFFGHRYYCISNNIVDGVDFNTLGKDNFEKNQENLSVYDIMLLMNNYVMDVMM 870 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 F+ + P D + N +S KGCY+GQE+++RI ++ +I K + I +DD Sbjct: 871 SKPGFVEYKLMPFDLNLQNFNYLSANKGCYVGQEIINRINNKVLINKYKLYIALSDD 927 >gi|146412820|ref|XP_001482381.1| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC 6260] Length = 436 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 89/308 (28%), Gaps = 109/308 (35%) Query: 10 SFIKVCGKSAIPFLQAIITA----DVLTLPY----------------------------- 36 + I++ G A F+ ++T D++ Sbjct: 13 ALIRIHGPDATKFVNGLVTTRLLPDIVKKKQHTISENENSHQELSQIIDVHRNWGLMHED 72 Query: 37 -----------KIARGSAILTPQGKILLYFLISKI--------EEDTFILEIDRSKRDSL 77 + S L +G++ I + +++E+D S R L Sbjct: 73 IYDPSNTIYVLRGGINSMFLNSKGRVFTDCFIYAHPFANSSENDHPDYVVEVDESLRTKL 132 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------------------- 114 L +KL + V IE +N F + Sbjct: 133 QMLLKLHKLAAKVNIEKLENVESHYYYNDTPEFDSFLEELQNNYILTKDPSQAREMAQRL 192 Query: 115 ----------------FIDERFSIADV---------------LLHRTWGHNEKIASDIKT 143 +D R + L + +A D+ Sbjct: 193 IDDQAIFGPNIPVVGFAVDNRIPNFGIKFLTKQLQNQDPFSSLFKSQFESPSVLAQDVAV 252 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R +G+++ +I P + +D NG+SL KGCY+GQE+ R + IRKR Sbjct: 253 ---RRYTNGLLEQADVSSDVSILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309 Query: 204 PMIITGTD 211 + + + Sbjct: 310 VVPVQFFE 317 >gi|257386337|ref|YP_003176110.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286] gi|257168644|gb|ACV46403.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286] Length = 362 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 107/306 (34%), Gaps = 57/306 (18%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + V G I F+ ++ V T S +L PQG + + E +L Sbjct: 48 YGVVTVTGDDRIDFVDNAVSNRVPT-ADGDGVYSLLLDPQGHVETELYVYNAGE-RLLLF 105 Query: 69 IDRSKRDSLID--KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 + ++ D L++ + + +V I V + + + + + + Sbjct: 106 VPPARADPLVEDWREKTFIQ--DVTIADATDEFAVFGVHGPKATEKIASVLNKTATPETP 163 Query: 127 LHRTWGH------------------------NEKIASDI----------------KTYHE 146 L G + +A D+ T+ Sbjct: 164 LSFVRGSMVDAGVTVVRSDGLVGEEGFEVVCSADVARDVYDTLENRGLNAAPFGYDTWDA 223 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 L + G +T+ P+ + NG+ KGC++GQEVVSR+ +R KR + Sbjct: 224 LTLEAGTPLFDTEIEGQ--IPNVVGLA--NGVDFEKGCFVGQEVVSRVHNRGRPSKRLVG 279 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGV 262 +T +P SG+ + DD +G + V + +A+AR+D ++ V G Sbjct: 280 LT-CGAVPESGAAVFVDDASVGAVTRAVESPTREEPIALARVDY--ELPDGTPSVRVDGG 336 Query: 263 RVKASF 268 V A Sbjct: 337 EVDAEL 342 >gi|312138308|ref|YP_004005644.1| glycine cleavage protein t [Rhodococcus equi 103S] gi|311887647|emb|CBH46959.1| glycine cleavage protein T [Rhodococcus equi 103S] Length = 377 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 49/297 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G+ + +L I + V +LP + + L G++ +F+++ I+ T Sbjct: 54 SHRFVIAISGEERLTWLHTISSQHVASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105 ++ + + L+ L S V+ Sbjct: 113 IDTEAGRGADLLGFLQKMVFWSKAEPRDGNELAVLSLLGPDVAASPAFTAALGVAALPGV 172 Query: 106 -QEHTFSNSSFI----DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHG 152 + + F+ D+L+ R + + LR+ Sbjct: 173 YEAEPLAGGGFVRRMPWPTDDAFDLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVAAH 232 Query: 153 IVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 233 RPRIGLD-TDDRTIPHEVGWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLH 291 Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMA 256 P G + +G +G VV G ALA+ R VD A+ G Sbjct: 292 LDGSAEGRPEVGETLTAAGRAVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGPC 348 >gi|291333966|gb|ADD93643.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C694] Length = 99 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+N+ +++ G FLQ +++ D+ L + SA+LTPQGK + F + I +D Sbjct: 3 TPLNNRKILELKGSDCKKFLQNLVSNDINLLDQGL-VYSALLTPQGKYIADFFVVPI-DD 60 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95 +++ +L+D+L YKLRS+V I+ Q Sbjct: 61 GMRIDVHAELAKTLLDRLNIYKLRSDVEIKKQ 92 >gi|269957803|ref|YP_003327592.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894] gi|269306484|gb|ACZ32034.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894] Length = 379 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 42/293 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G + +L I + D+ +L + + +L+PQG + + + + Sbjct: 45 SHLGVVRVAGPDRLRWLHDITSQDLASLTPRTSTELLVLSPQGHVEH-AAGAVDDGEATW 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS---WNQEHTFSNSSFIDERFSIA 123 L + + L L + V + + + + ++ D +A Sbjct: 104 LVTEADQAAPLAAWLDRMRFTLRVEVADVTADWAAIGEPVAAEGAPDGPLTWWDTWPRVA 163 Query: 124 DVLLHRTWGHNEKIASD-----------------------------IKTYHELRINHGIV 154 E ++ LR+ Sbjct: 164 AGGTRYGPDTAEHPGAERPWRLVLVPRGSLEAEVAAREAAGARLAGTWATEALRVEAFRP 223 Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 P + + PH+ +D L + L KGCY GQE V+R+ + +R + + Sbjct: 224 RPARE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRLVFLHLDGSG 280 Query: 213 --LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 LP G+ +L +D +GTL V L + V ++ + L V G Sbjct: 281 HLLPEPGAEVLLPSDGRVVGTLTSVARHHELGPVGLAVVKRSVPEDAELLVAG 333 >gi|134103536|ref|YP_001109197.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] gi|291008361|ref|ZP_06566334.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] gi|133916159|emb|CAM06272.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] Length = 376 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 105/312 (33%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L +++ + LP A + +L G + + +++ + ++ Sbjct: 43 SHRQVIAVPGEERLSWLHLVLSQHMTELPDGRATEALVLDSHGHVDCHVMVAHHDGVVYL 102 Query: 67 LEIDRSKR------------DSLIDKLLFYKLRSNVIIEIQPINGVVLS----------- 103 ++ SL++ L + S V +LS Sbjct: 103 DTEPGAQATSALPSLGVDGRQSLLEYLEAMRFWSKVEPRDASEEFALLSVIGPDAAQLLS 162 Query: 104 --------WNQEHTFSNSSFI-----------DERFSIADVLLHRT-WGHNEKIASDIKT 143 ++ F+ D AD++ T + Sbjct: 163 KFATVPSGGDEVAGLPGGGFVRTVPFRGLFTADLVVPRADLVEWWTKLTDAGMRPAGTMA 222 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 Y LR+ + PH+ + + KGCY GQE VS++ + +R Sbjct: 223 YDALRVEALRPRVGFE-TDDRAIPHELGWVHVAA-HVAKGCYRGQETVSKVHNVGKPPRR 280 Query: 204 PMIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKG 254 +++ + P +G P+ + ++G +G VV G ALA+ R VD + G Sbjct: 281 MVLLHLDGSVEIRPETGDPVWHGERKVGRVGTVVLHHELGPIALALLKRTAPVDAELVAG 340 Query: 255 MALTVHGVRVKA 266 V Sbjct: 341 DPEQDRAVAAAV 352 >gi|325674774|ref|ZP_08154461.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707] gi|325554360|gb|EGD24035.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707] Length = 377 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 49/297 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I + G+ + +L I + V +LP + + L G++ +F+++ I+ T Sbjct: 54 SHRFVIAISGEERLTWLHTISSQHVASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVT-W 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 ++ + + L+ L S + + + GV Sbjct: 113 IDTEAGRGADLLGFLQKMVFWSKAEPRDGNELAVLSLLGPDVAASPAFTAALGVAALPGV 172 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHG 152 + D+L+ R + + LR+ Sbjct: 173 YEAVPLAGGGFVRRMPWPTDDAFDLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVAAH 232 Query: 153 IVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 D PH+ + L KGCY GQE V+R+ + + +++ Sbjct: 233 RPRIGLD-TDDRTIPHEVGWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLH 291 Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMA 256 P G + +G +G VV G ALA+ R VD A+ G Sbjct: 292 LDGSAEGRPEVGETLTAAGRAVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGPC 348 >gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] Length = 369 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 100/316 (31%), Gaps = 57/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L + T + LP +L+P G + + ++++ T Sbjct: 57 SHRGVIAVPGEERLGWLHTLTTQHLAELPAGQGTELLVLSPHGHVEQHAMVAEDGGTT-W 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSSFIDE-- 118 L+ + L+ L + S V + +L+ T S D Sbjct: 116 LDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLALVGPAAVEAAATLGVSGLADPDV 175 Query: 119 ------------------------RFSIADVLLHRTWGHNEKIASD-------------- 140 + G + +A D Sbjct: 176 LEVPGPKFRAGSVPPRPTVRYDVRPLPVGGWARRGPLGVDLLVARDTMGQVVTDLRAAGV 235 Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + Y +R+ D P + + + + L KGCY GQE V+R+ + Sbjct: 236 PVAGLWAYEAVRVGARRPRVGVD-TDHRTIPAEVDL-VGPAVHLEKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 +R +++ TD+ P +G+P++ + +G +G V L + V + Sbjct: 294 MGRPPRRLVLLHLDGVTTDEPPSAGTPVMREGRAVGFVGTAVHHHELGQIALAVVKRNVP 353 Query: 253 KGMALTVHGVRVKASF 268 L V Sbjct: 354 DDARLLVGETAAMIDR 369 >gi|300712072|ref|YP_003737886.1| aminomethyltransferase [Halalkalicoccus jeotgali B3] gi|299125755|gb|ADJ16094.1| aminomethyltransferase [Halalkalicoccus jeotgali B3] Length = 358 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 110/305 (36%), Gaps = 57/305 (18%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G + ++ +++ V + + PQG+I L + E +L Sbjct: 48 YGVLVITGDDRVEYVDNVVSNRVPD-DDGEGAYALLCDPQGRIELDIYVYNAGE-RLLLF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT------------FSNSSF 115 + + L ++ K+ V IE+ + VL + Sbjct: 106 VPPGRARGLAEEW-REKVFIQDVEIEVASDDLAVLGVHGPKATEKVASVLNKIGVPEGEL 164 Query: 116 IDERFSIADVLLHRTWGHNE----------------------------KIASDIKTYHEL 147 + +R +I D+ + + I +T+ L Sbjct: 165 VFDRGTINDIGVTVIASDDPTGEDGYEIVCSAAESEAVMDALINYGTGAIPFGSRTWETL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + G +++ P ++ L N + KGC++GQEV+SR+++R +R + + Sbjct: 225 TLEAGTPLFSSEL--EGRVP--NVLGLRNAVDFEKGCFVGQEVISRVENRGQPSQRLVGL 280 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263 +LP +G+ +L DD +G + V +L A+A ++ + +TV Sbjct: 281 R-CSELPAAGTAVLGDDETVGEITRAVQSPSLSEPIALALVEFGLES----EDVTVGDES 335 Query: 264 VKASF 268 V A+ Sbjct: 336 VPATV 340 >gi|302788266|ref|XP_002975902.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii] gi|300156178|gb|EFJ22807.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii] Length = 354 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 98/307 (31%), Gaps = 51/307 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S+ ++V G + FL TAD L L + +T + + + Sbjct: 39 IEMSHFGRLRVTGDDRLRFLHNQSTADFLPLKDGEGCDTVFVTNTARTIDLATAWAMNTA 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------SF 115 +L ++ D LI L Y S+ +E+ I ++ S++ S Sbjct: 99 VILLVSPETRHD-LIKLLNKYIFFSD-KVEVDDITEKTSYFSIVGPQSDNVMRQLKLESL 156 Query: 116 IDERF-------------------------------SIADVLLHRTWGHNEKIASDIKTY 144 ID+ + + A + + + + Sbjct: 157 IDKPYGTHVHYTANGAPVTVGVGSGLCTKGYSFLVSTAAAGPVWTSILKCGALPMGSSAW 216 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G P + +A + IS TKGCYIGQE V+R+ N +++ Sbjct: 217 ERLRILQGRPVPGKELT-DEFNVLEAGLWRT--ISQTKGCYIGQETVARLITYNGVKQHL 273 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK---ALAIARIDKVDHAIKKGMALTVHG 261 + T + P D ++ G L + L R G+ + + Sbjct: 274 HGVKLTGAVEPGTILTTRDGVKAGKLTSCTREAPYFGLCYIR----KQCGGPGLEIKIGD 329 Query: 262 VRVKASF 268 V Sbjct: 330 GSVTGIL 336 >gi|296107164|ref|YP_003618864.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy] gi|295649065|gb|ADG24912.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy] Length = 329 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 36 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDTSMIQGAQCNLKGRILSLLDIINWQG--V 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + + L L S V I I G L + E +++ Sbjct: 94 KLVLPQDLIEVTQNSLNKVALLSRVKITSNHNYKILGFYLQHGNDQIPQLLPLSSELYAL 153 Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + D L +N+ + S T+H LR+ + +D Sbjct: 154 SCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 211 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216 + PH + +S KGCY GQE+++R +R ++ +I + L S Sbjct: 212 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 269 Query: 217 GSPIL--TDDIEIGTL 230 G + +D E+G L Sbjct: 270 GQKLFKSDEDTEVGEL 285 >gi|54297492|ref|YP_123861.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris] gi|53751277|emb|CAH12688.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris] Length = 352 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDTSMIQGAQCNLKGRILSLLDIINWQG--V 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + + L L S V I I G L + E +++ Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNHNYKILGFYLQHGNDQIPQLLPLSSELYAL 176 Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + D L +N+ + S T+H LR+ + +D Sbjct: 177 SCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 234 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216 + PH + +S KGCY GQE+++R +R ++ +I + L S Sbjct: 235 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 292 Query: 217 GSPIL--TDDIEIGTL 230 G + +D E+G L Sbjct: 293 GQKLFKSDEDTEVGEL 308 >gi|54294377|ref|YP_126792.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens] gi|53754209|emb|CAH15686.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens] Length = 352 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 35/255 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + + L L S V I I G L + + E +++ Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176 Query: 123 ADVL-----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + L + + N ++ + T+H LR+ + +D + Sbjct: 177 SCTTHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYPN 235 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSG 217 PH + +S KGCY GQE+++R +R ++ +I + L SG Sbjct: 236 -SRGLFLPHRIGLHQTTYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-SG 293 Query: 218 SPILTDDI--EIGTL 230 + D E+G L Sbjct: 294 QKLFKSDENTEVGEL 308 >gi|307610278|emb|CBW99842.1| hypothetical protein LPW_16031 [Legionella pneumophila 130b] Length = 352 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 35/255 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + + L L S V I I G L + + E +++ Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176 Query: 123 ADVL-----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + L + + N ++ + T+H LR+ + +D + Sbjct: 177 SCTTHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYPN 235 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSG 217 PH + +S KGCY GQE+++R +R ++ +I + L SG Sbjct: 236 -SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-SG 293 Query: 218 SPILTDDI--EIGTL 230 + D E+G L Sbjct: 294 QKLFKADENTEVGEL 308 >gi|52841809|ref|YP_095608.1| glycine cleavage T protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628920|gb|AAU27661.1| glycine cleavage T protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 352 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I + G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 L + + + + L L S V I I G L + + E +++ Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176 Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + D L +N+ + S T+H LR+ + +D Sbjct: 177 SCTAHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 234 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216 + PH + +S KGCY GQE+++R +R ++ +I + L S Sbjct: 235 N-SRGLFLPHRIGLHQTTYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 292 Query: 217 GSPILTDDI--EIGTL 230 G + D E+G L Sbjct: 293 GQKLFKSDENTEVGEL 308 >gi|28493623|ref|NP_787784.1| hypothetical protein TWT656 [Tropheryma whipplei str. Twist] gi|28476665|gb|AAO44753.1| unknown [Tropheryma whipplei str. Twist] Length = 344 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 20/274 (7%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S V L +++ G+ L AI T D I+ + L QG+++ + + Sbjct: 45 SVVPLDPARVLRLFGEDRFKILHAISTQDYT--QPMISTETLFLNSQGRVINRACVVAAQ 102 Query: 62 EDTFILEIDRSKRDS-LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E L D K L + LL + IE + + + D Sbjct: 103 E-CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERL-AEWQDPWP 160 Query: 121 SIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIV---DPNTDFLPSTIF 166 +I E+ IK + + G++ P+ + Sbjct: 161 NICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSL 220 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 PH+ L + LTKGCY GQE+V+++ + +R + + LP + IL D Sbjct: 221 PHELGW-LRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGKR 279 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 +G + V L + V ++ +G L V Sbjct: 280 VGRVTSVANHWELGPIALGVVKRSVPEGKVLLVD 313 >gi|298345557|ref|YP_003718244.1| glycine cleavage T protein [Mobiluncus curtisii ATCC 43063] gi|304391113|ref|ZP_07373065.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235618|gb|ADI66750.1| glycine cleavage T protein (aminomethyl transferase) [Mobiluncus curtisii ATCC 43063] gi|304325996|gb|EFL93242.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 354 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 103/290 (35%), Gaps = 62/290 (21%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67 +KV G +L ++ T D +R + IL P G I L F + +IL Sbjct: 24 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 83 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108 E R + + RS V I + V+ W+++ Sbjct: 84 EEPRGAVEFFQS----MRFRSRVEIADVSADFTVIGYLKTGDKDSLAAQFWSEQARVTWT 139 Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144 T +S D ++ L N + +D+ + Sbjct: 140 DPWPGPVGNTTTFTIPGASHPADDPAAPHRELAVVSHPDLPALEAKAATNALMKADLGAW 199 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203 +RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R Sbjct: 200 EAVRISLWHPRLGREGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 256 Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR 243 + +LP GSP+ +D E+G L V G+ L + + Sbjct: 257 LTFLDIDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLK 306 >gi|28572820|ref|NP_789600.1| hypothetical protein TW679 [Tropheryma whipplei TW08/27] gi|28410953|emb|CAD67338.1| conserved hypothetical protein [Tropheryma whipplei TW08/27] Length = 321 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 20/274 (7%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S V L +++ G+ L AI T D I+ + L QG+++ + + Sbjct: 22 SVVPLDPARVLRLFGEDRFKILHAISTQDYT--QPMISTETLFLNSQGRVINRACVVAAQ 79 Query: 62 EDTFILEIDRSKRDS-LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E L D K L + LL + IE + + + D Sbjct: 80 E-CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERL-AEWQDPWP 137 Query: 121 SIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIV---DPNTDFLPSTIF 166 +I E+ IK + + G++ P+ + Sbjct: 138 NICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSL 197 Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226 PH+ L + LTKGCY GQE+V+++ + +R + + LP + IL D Sbjct: 198 PHELGW-LRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGKR 256 Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 +G + V L + V ++ +G L V Sbjct: 257 VGRVTSVANHWELGPIALGVVKRSVPEGKVLLVD 290 >gi|315656014|ref|ZP_07908912.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333] gi|315490078|gb|EFU79705.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333] Length = 368 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 109/304 (35%), Gaps = 64/304 (21%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67 +KV G +L ++ T D +R + IL P G I L F + +IL Sbjct: 38 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 97 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108 E R + + RS V I + V+ W+++ Sbjct: 98 EEPRGTVEFFQA----MRFRSRVEIADVSADFAVIGYLKTGDKDSLAAQFWSEQARVTWT 153 Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144 T +S D ++ L N + +D+ + Sbjct: 154 DPWPGPVGNTTTFTTPGASHPADDPAAPHRELAVVSHPDLPALEAKAATNALMKADLGAW 213 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203 +RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R Sbjct: 214 EAVRISLWHPRLGCEGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 270 Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR--IDKVDHAI 251 + +LP GSP+ +D E+G L V G+ L + + +D + + Sbjct: 271 LTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLKRQVDPAEMLL 330 Query: 252 KKGM 255 +G Sbjct: 331 VEGT 334 >gi|255615044|ref|XP_002539647.1| conserved hypothetical protein [Ricinus communis] gi|223504030|gb|EEF22736.1| conserved hypothetical protein [Ricinus communis] Length = 279 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 40/96 (41%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++V G A FLQ +T DV A A TP+G+I FLI + +E T Sbjct: 159 LPYWSTLQVAGPDAAKFLQGQLTCDVAQATTTQAVPGAHCTPKGRIRSSFLIGRRDEQTH 218 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV 101 L + + L Y + S I Q V+ Sbjct: 219 WLRVRSDLLTTASAALGKYIVFSKAAIAAQEQLAVL 254 >gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] Length = 369 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 98/312 (31%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G+ + +L + T + LP +L+P G + + ++++ E T Sbjct: 57 SHRGVIAVPGEDRLGWLHTLTTQHLADLPDGQGTELLVLSPHGHVEQHAMVAE-EGGTTW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 L+ + L+ L + S V + +LS + Sbjct: 116 LDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLSLVGPAAVDAVATLGVSDLAEPDL 175 Query: 115 --FIDERFSIADVLLHRT------------WGHNEKIASDI------------------- 141 +F V T W + D+ Sbjct: 176 LEVPGPKFRAGSVPPRPTVRYDVRALPIGGWARRGPLGVDLLVAREGMGRVVAELRGADV 235 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y +R+ D P + + + + L KGCY GQE V+R+ + Sbjct: 236 PVVGLWAYEAVRVAARRPRVGLD-TDHRSIPAEVDL-VGPAVHLEKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 +R +++ TD P +G+P+ D +G +G V L + V + Sbjct: 294 MGRPPRRLVLLHLDGVTTDQPPSAGTPVTRDGRTVGFVGTAVHHHELGQVALAVVKRNVP 353 Query: 253 KGMALTVHGVRV 264 L V Sbjct: 354 DDARLLVGETAA 365 >gi|159899967|ref|YP_001546214.1| glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC 23779] gi|159893006|gb|ABX06086.1| Glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC 23779] Length = 327 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 106/305 (34%), Gaps = 46/305 (15%) Query: 3 SVYL--SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +VYL S+ I++ G+ + + + T VL L + + + T G+I+ + I Sbjct: 13 AVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRIIDLITVFAI 72 Query: 61 EEDTFILEIDRSKRDSLIDKL---LFY----KLR-------------SNVI-----IEIQ 95 ++DT + ++ L FY K+R S + Q Sbjct: 73 DDDTIWVITSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQATAMLERLTSQ 132 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIK 142 + V L + R + D Sbjct: 133 SLEHVGLWQHLSAEIDGCPVRLARIRPMRGAGWAIFADLAAADALCEAFDDANAALLDRP 192 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 TYH LR+ G N L P +A + + +S KGCYIGQE+++R+ R + K Sbjct: 193 TYHTLRVEAGYPALNE--LNEEFIPLEANL--WDAVSFNKGCYIGQEIIARMDSRGRLAK 248 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKGMALTVHG 261 + + + + + + + + GTL VV AL + V + G LT+ Sbjct: 249 KLQGLGLSGAVEVPAT-LTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELGSELTIGE 307 Query: 262 VRVKA 266 + Sbjct: 308 QQATV 312 >gi|299115744|emb|CBN74309.1| folate-binding protein YgfZ [Ectocarpus siliculosus] Length = 544 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 113/342 (33%), Gaps = 86/342 (25%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF----------- 55 S+ I+V G+ + FL + T + G+++ F Sbjct: 147 SHWGVIRVEGEDRLRFLHSQGTNAFERATVGQVVATCFTNNIGRVV-DFCEGVVLDDAVW 205 Query: 56 LISKIEE--------DTFILEIDRSKRDSLIDKLLFYKL--------------------- 86 LIS D FI +D++ SL ++L + L Sbjct: 206 LISSPHRWQKLLGTMDKFIFPMDKTTVSSLSEELAVFSLAGPKAAETMAMAKCASCPEPG 265 Query: 87 RS--------NVII---------EIQPINGV------VLSWNQEHTFSNSSF---IDERF 120 RS V+I + GV VLS + E + + Sbjct: 266 RSVEWEFEGEKVLIIGHARPLTRTREEEEGVSHDAEGVLSGDGERQGTQQHPYYSVIVPV 325 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 S++ + +A+ + + LRI G P + + P +A + + + Sbjct: 326 SVSSKVWSALSASPSVVAAGEEEWQTLRIKQGFPFPGKELT-ADYNPLEAGL--WHAVHF 382 Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTD--DIEIGTLGVVVGKK 237 KGCYIGQE +SR+ N + K ++ D P G+ + G + ++ + Sbjct: 383 DKGCYIGQESISRVNAYNAVSKALYGVSFEDSTSPEQGTELFVQETGKSAGVVTSMLDRD 442 Query: 238 ------ALAIARIDK----VDHAIKKGMALTVHGVRVKASFP 269 LA R + + K+G L G V+ +P Sbjct: 443 ATSHPFGLAYIRTKAGGVGLKLSTKEGEPL---GTVVQVPYP 481 >gi|294891144|ref|XP_002773442.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239878595|gb|EER05258.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 165 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%) Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 S Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R Sbjct: 3 SDAESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRA 62 Query: 195 QHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIK 252 + +RKR + D+ SG+ I+ D +IG + + + + I ++ Sbjct: 63 SKKLAVRKRLFGMRIDGDVDVESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP-- 120 Query: 253 KGMALTVHGVRVKASF 268 KGM + V+A+ Sbjct: 121 KGMQMNTKQAMVEATK 136 >gi|227494479|ref|ZP_03924795.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces coleocanis DSM 15436] gi|226832213|gb|EEH64596.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces coleocanis DSM 15436] Length = 385 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 105/314 (33%), Gaps = 65/314 (20%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + ++ ++V G +L + + + + +R +L PQG+I + E Sbjct: 38 ALCEFNDLGLVRVAGPDCFSWLTTLSSQILTGMTAGESREMLLLDPQGRIQFACGVVAGE 97 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQPI 97 + ++L ++ K +L+D L + V + + + Sbjct: 98 GEVYLL-LEGGKVPALVDFLTKMQFMLRVEVTDVSADFAVFATIVPQGKFSTVINNLATL 156 Query: 98 NGVVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTWGHNEK------------- 136 GV W T++ F V + + G E Sbjct: 157 PGVFGQWEDPWPGVVEGGTTYTPVGFKHPALERKRVFVLVSAGEAESFTHAWVSSVFSAG 216 Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSR 193 + + LRI D + + PH+ +D L + L KGCY GQE V+R Sbjct: 217 DCPWAGRNAWEALRIEDMRPDYLHE-VDDKSLPHE--LDWLRTAVHLNKGCYCGQEAVAR 273 Query: 194 IQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVV-----GKKALAIARID 245 I + +R +++ G+P+L +G + + G ALA+ R Sbjct: 274 IVNLGKPPRRLVVLQLDGSNSVQIKVGAPVLAGKRSVGAVTSIARHADLGPVALAVVR-- 331 Query: 246 KVDHAIKKGMALTV 259 + LTV Sbjct: 332 ---RGLALEAPLTV 342 >gi|315503573|ref|YP_004082460.1| folate-binding protein ygfz [Micromonospora sp. L5] gi|315410192|gb|ADU08309.1| folate-binding protein YgfZ [Micromonospora sp. L5] Length = 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 62/303 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G+ I +L + + + L +L+P G + + +++ + +T Sbjct: 57 SHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQHAMVA-DDGETTW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 L+ + + L+ L + S V + +LS Sbjct: 116 LDTEPGMTEGLLSYLEKMRFFSKVDPRDATADHALLSLVGPEAPGALDTLGVTGLAAPDV 175 Query: 113 SSFIDERFSIA----------------------------DVLLHRTWGH--------NEK 136 ++ +F D+L+ R Sbjct: 176 AAVPGPKFRSGELPARPSAVYDVKPLPVGGWARRVALGVDLLVPRAAMDEVVAELRGAGV 235 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + + Y +R+ D P + + + + L KGCY GQE V+R+ + Sbjct: 236 PVAGLWAYEAIRVAAKQARAGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV 247 +R +++ +D P +G+P+ D +G +G V G+ ALA+ + + Sbjct: 294 LGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTAVQHYELGQVALAVLKRNTP 353 Query: 248 DHA 250 D A Sbjct: 354 DDA 356 >gi|296130918|ref|YP_003638168.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109] gi|296022733|gb|ADG75969.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109] Length = 399 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 113/328 (34%), Gaps = 68/328 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + +L ++ + DV LP + + +L P G + + T++ Sbjct: 59 SHLGVVTVTGPDRLSWLHSLTSQDVAALPPRTSTELLVLDPHGHVEHVAGMVDDGTTTWL 118 Query: 67 LEIDRSKRDSLIDKLLFYKLR---SNVI---------IEIQPINGVVLSWNQ--EHTFSN 112 + + +D++ F LR ++V ++ + G ++W HT Sbjct: 119 VGETAPALAAWLDRMRFM-LRVEVADVTDAWAALAEPVDAEGAEGEPVTWRDPWPHTAPG 177 Query: 113 S---SFIDERFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINHGIVDP 156 D D E++ +++ LR+ Sbjct: 178 GTRYGVEDAAHPGGDRRWRLVLVPRERLVAEVRTRQAAGWPLVGTWAAEALRVEAWRPRA 237 Query: 157 NTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--- 212 + + + PH+ +D L + L KGCY GQE V+R+ + +R +++ Sbjct: 238 SHE-VDDRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLHLDGSGHL 294 Query: 213 LPPSGSPI---------------LTDDIEIGTLGVVV-----GKKALAIAR--------- 243 +P G+ + + ++G + V G ALA+ + Sbjct: 295 VPAVGAAVRLPGAAAPTAGGAEAAGEGRQVGRVTTVARHHELGPVALAVVKRNVPTDATL 354 Query: 244 -IDKVDHAIKKGMALTVHGVRVKASFPH 270 +D A+ G + V G + P Sbjct: 355 LVDCDGGAVAAGQEVVVDGEGITPDRPA 382 >gi|315656111|ref|ZP_07909002.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493113|gb|EFU82713.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 368 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 103/290 (35%), Gaps = 62/290 (21%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67 +KV G +L ++ T D +R + IL P G I L F + +IL Sbjct: 38 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 97 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108 E R + + RS V I + V+ W+++ Sbjct: 98 EEPRGAVEFFQS----MRFRSRVEIVDVSADFAVIGYLKTGDKDSLAAQFWSEQARVIWT 153 Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144 T +S D ++ L N + +D+ + Sbjct: 154 DPWPGPVGNTTTFTTPGASHPADDPAAPHRELAVVSRPDLPDLEAKAATNALMKADLGAW 213 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203 +RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R Sbjct: 214 EAVRISLWHPRLGCEGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 270 Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR 243 + +LP GSP+ +D E+G L V G+ L + + Sbjct: 271 LTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLK 320 >gi|302870150|ref|YP_003838787.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029] gi|302573009|gb|ADL49211.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029] Length = 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 62/303 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G+ I +L + + + L +L+P G + + +++ + +T Sbjct: 57 SHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQHAMVA-DDGETTW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 L+ + + L+ L + S V + +LS Sbjct: 116 LDTEPGMTEGLLSYLEKMRFFSKVDPRDATADHALLSLVGPEAPGALDTLGVTGLAAPDV 175 Query: 113 SSFIDERFSIA----------------------------DVLLHRTWGH--------NEK 136 ++ +F D+L+ R Sbjct: 176 AAVPGPKFRSGELPARPSAVYDVKPLPVGGWARRVALGVDLLVPRAAMDEMVAELRGAGV 235 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + + Y +R+ D P + + + + L KGCY GQE V+R+ + Sbjct: 236 PVAGLWAYEAIRVAAKQARAGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV 247 +R +++ +D P +G+P+ D +G +G V G+ ALA+ + + Sbjct: 294 LGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTAVQHYELGQVALAVLKRNTP 353 Query: 248 DHA 250 D A Sbjct: 354 DDA 356 >gi|260185703|ref|ZP_05763177.1| hypothetical protein MtubCP_06685 [Mycobacterium tuberculosis CPHL_A] gi|289446375|ref|ZP_06436119.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419333|gb|EFD16534.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length = 368 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 93/286 (32%), Gaps = 52/286 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L +I T V LP + + L QG++ I T Sbjct: 39 SHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 L+ + + + L+ L S V +++ P + Sbjct: 98 LDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWL 157 Query: 101 VLSWNQEHTFS----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + +R AD R + I Y R+ Sbjct: 158 AVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRAD--WQRRLTQAGVRPAGIWAYEAHRVA 215 Query: 151 HGIVDPNTDF---LPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 H + PH+ + L KGCY GQE V+R+ + + Sbjct: 216 HRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRML 275 Query: 205 MIITGTDDL--PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 +++ + + P +G +L +G LG VV G ALA+ + Sbjct: 276 VLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLK 321 >gi|149174487|ref|ZP_01853113.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces maris DSM 8797] gi|148846597|gb|EDL60934.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces maris DSM 8797] Length = 358 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 48/308 (15%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LSN+ I++ G + FL T D+ L + + Q +IL + D+ Sbjct: 49 LSNRDQIELSGTDRLKFLHNFCTNDIKGLQPNQGCEAFVTNVQSRILGHINAFH-HGDSI 107 Query: 66 ILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFI------- 116 ++ + + + L Y + + +++ Q + LS + Sbjct: 108 WIDTAPGQAEEITRHLERYIILEDARLLVRTQEFGSLYLSGPDATDILKQLDLEVEGLEE 167 Query: 117 ---------DERFSIADVLLHRTWG------------------HNEKIASDIKTYHELRI 149 D R ++ V G + + + + + LRI Sbjct: 168 FHQLSVSNSDARLTVRRVDWFGQPGYLCSLQYVKIGEFWNRLIESGAVPAGQQVFDALRI 227 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D + +A IS KGCY+GQE ++RI + K I Sbjct: 228 ESLYPIYGVDLSDAN-LAQEAS-RTAQSISFKKGCYLGQEPIARIDSLGHVNKEIRSIGL 285 Query: 210 TDD-LPPSGSPILTDD----IEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVH 260 +PP+G+ ++ E GT+ +A+ + K +A + + Sbjct: 286 EGAWVPPAGAKVMFAGDDGPEEAGTITSAARSFGKYPVVAMTVLRKSANAPGTEVEVVAD 345 Query: 261 GVRVKASF 268 + Sbjct: 346 DQSATGTV 353 >gi|302770324|ref|XP_002968581.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii] gi|300164225|gb|EFJ30835.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii] Length = 354 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 99/307 (32%), Gaps = 51/307 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S+ ++V G + FL TAD+L L + +T + + + Sbjct: 39 IEMSHFGRLRVTGDDRLRFLHNQSTADLLQLKDGEGCDTVFVTNTARTIDLATAWAMNTA 98 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------SF 115 +L ++ D LI L Y S+ +E+ I ++ S++ S Sbjct: 99 VILLVSPETRHD-LIKLLNKYIFFSD-KVEVDDITEKTSYFSIVGPQSDNVMRQLKLESL 156 Query: 116 IDERF-------------------------------SIADVLLHRTWGHNEKIASDIKTY 144 ID+ + + A + + + + Sbjct: 157 IDKPYGTHVHYTANGAPVTVGVGSGLCTKGYSFLVSTAAAGPVWTSILKCGALHMGSLAW 216 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G P + +A + IS TKGCYIGQE V+R+ N +++ Sbjct: 217 ERLRILQGRPVPGKELT-DEFNVLEAGLWRT--ISQTKGCYIGQETVARLITYNGVKQHL 273 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK---ALAIARIDKVDHAIKKGMALTVHG 261 + T + P D ++ G L + L R G+ + + Sbjct: 274 HGVKLTGAVEPGTILTTRDGVKAGKLTSCTREAPYFGLCYIR----KQCGGPGLEIKIGD 329 Query: 262 VRVKASF 268 V Sbjct: 330 GSVTGIL 336 >gi|15607951|ref|NP_215326.1| hypothetical protein Rv0811c [Mycobacterium tuberculosis H37Rv] gi|15840223|ref|NP_335260.1| hypothetical protein MT0832 [Mycobacterium tuberculosis CDC1551] gi|31791999|ref|NP_854492.1| hypothetical protein Mb0834c [Mycobacterium bovis AF2122/97] gi|121636735|ref|YP_976958.1| hypothetical protein BCG_0863c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660589|ref|YP_001282112.1| hypothetical protein MRA_0821 [Mycobacterium tuberculosis H37Ra] gi|148822017|ref|YP_001286771.1| hypothetical protein TBFG_10826 [Mycobacterium tuberculosis F11] gi|167967708|ref|ZP_02549985.1| hypothetical protein MtubH3_06598 [Mycobacterium tuberculosis H37Ra] gi|215402601|ref|ZP_03414782.1| hypothetical protein Mtub0_02683 [Mycobacterium tuberculosis 02_1987] gi|215410380|ref|ZP_03419188.1| hypothetical protein Mtub9_03425 [Mycobacterium tuberculosis 94_M4241A] gi|215426070|ref|ZP_03423989.1| hypothetical protein MtubT9_06653 [Mycobacterium tuberculosis T92] gi|215429661|ref|ZP_03427580.1| hypothetical protein MtubE_02955 [Mycobacterium tuberculosis EAS054] gi|215444947|ref|ZP_03431699.1| hypothetical protein MtubT_03057 [Mycobacterium tuberculosis T85] gi|218752473|ref|ZP_03531269.1| hypothetical protein MtubG1_03060 [Mycobacterium tuberculosis GM 1503] gi|219556669|ref|ZP_03535745.1| hypothetical protein MtubT1_04915 [Mycobacterium tuberculosis T17] gi|224989206|ref|YP_002643893.1| hypothetical protein JTY_0833 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797758|ref|YP_003030759.1| hypothetical protein TBMG_00825 [Mycobacterium tuberculosis KZN 1435] gi|254231123|ref|ZP_04924450.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254363749|ref|ZP_04979795.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254549782|ref|ZP_05140229.1| hypothetical protein Mtube_04851 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260199825|ref|ZP_05767316.1| hypothetical protein MtubT4_06755 [Mycobacterium tuberculosis T46] gi|260204000|ref|ZP_05771491.1| hypothetical protein MtubK8_06790 [Mycobacterium tuberculosis K85] gi|289442214|ref|ZP_06431958.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289553068|ref|ZP_06442278.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289568764|ref|ZP_06448991.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289573429|ref|ZP_06453656.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289744535|ref|ZP_06503913.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749327|ref|ZP_06508705.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289752860|ref|ZP_06512238.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289756898|ref|ZP_06516276.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289760940|ref|ZP_06520318.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294996290|ref|ZP_06801981.1| hypothetical protein Mtub2_17746 [Mycobacterium tuberculosis 210] gi|297633322|ref|ZP_06951102.1| hypothetical protein MtubK4_04326 [Mycobacterium tuberculosis KZN 4207] gi|297730306|ref|ZP_06959424.1| hypothetical protein MtubKR_04401 [Mycobacterium tuberculosis KZN R506] gi|298524301|ref|ZP_07011710.1| glycine cleavage T-protein [Mycobacterium tuberculosis 94_M4241A] gi|306774932|ref|ZP_07413269.1| hypothetical protein TMAG_03962 [Mycobacterium tuberculosis SUMu001] gi|306781336|ref|ZP_07419673.1| hypothetical protein TMBG_03272 [Mycobacterium tuberculosis SUMu002] gi|306783473|ref|ZP_07421795.1| hypothetical protein TMCG_04011 [Mycobacterium tuberculosis SUMu003] gi|306790333|ref|ZP_07428655.1| hypothetical protein TMDG_03366 [Mycobacterium tuberculosis SUMu004] gi|306794827|ref|ZP_07433129.1| hypothetical protein TMEG_02398 [Mycobacterium tuberculosis SUMu005] gi|306796578|ref|ZP_07434880.1| hypothetical protein TMFG_03974 [Mycobacterium tuberculosis SUMu006] gi|306802437|ref|ZP_07439105.1| hypothetical protein TMHG_03843 [Mycobacterium tuberculosis SUMu008] gi|306806645|ref|ZP_07443313.1| hypothetical protein TMGG_04014 [Mycobacterium tuberculosis SUMu007] gi|306966843|ref|ZP_07479504.1| hypothetical protein TMIG_04010 [Mycobacterium tuberculosis SUMu009] gi|306971036|ref|ZP_07483697.1| hypothetical protein TMJG_04030 [Mycobacterium tuberculosis SUMu010] gi|307078767|ref|ZP_07487937.1| hypothetical protein TMKG_03519 [Mycobacterium tuberculosis SUMu011] gi|307083328|ref|ZP_07492441.1| hypothetical protein TMLG_04051 [Mycobacterium tuberculosis SUMu012] gi|313657631|ref|ZP_07814511.1| hypothetical protein MtubKV_04381 [Mycobacterium tuberculosis KZN V2475] gi|2916869|emb|CAA17617.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880380|gb|AAK45074.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31617586|emb|CAD93696.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121492382|emb|CAL70849.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600182|gb|EAY59192.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134149263|gb|EBA41308.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148504741|gb|ABQ72550.1| hypothetical protein MRA_0821 [Mycobacterium tuberculosis H37Ra] gi|148720544|gb|ABR05169.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224772319|dbj|BAH25125.1| hypothetical protein JTY_0833 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319261|gb|ACT23864.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289415133|gb|EFD12373.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289437700|gb|EFD20193.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289537860|gb|EFD42438.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289542518|gb|EFD46166.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289685063|gb|EFD52551.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289689914|gb|EFD57343.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289693447|gb|EFD60876.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289708446|gb|EFD72462.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289712462|gb|EFD76474.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298494095|gb|EFI29389.1| glycine cleavage T-protein [Mycobacterium tuberculosis 94_M4241A] gi|308216525|gb|EFO75924.1| hypothetical protein TMAG_03962 [Mycobacterium tuberculosis SUMu001] gi|308325864|gb|EFP14715.1| hypothetical protein TMBG_03272 [Mycobacterium tuberculosis SUMu002] gi|308331736|gb|EFP20587.1| hypothetical protein TMCG_04011 [Mycobacterium tuberculosis SUMu003] gi|308333226|gb|EFP22077.1| hypothetical protein TMDG_03366 [Mycobacterium tuberculosis SUMu004] gi|308336880|gb|EFP25731.1| hypothetical protein TMEG_02398 [Mycobacterium tuberculosis SUMu005] gi|308343006|gb|EFP31857.1| hypothetical protein TMFG_03974 [Mycobacterium tuberculosis SUMu006] gi|308346892|gb|EFP35743.1| hypothetical protein TMGG_04014 [Mycobacterium tuberculosis SUMu007] gi|308350833|gb|EFP39684.1| hypothetical protein TMHG_03843 [Mycobacterium tuberculosis SUMu008] gi|308355468|gb|EFP44319.1| hypothetical protein TMIG_04010 [Mycobacterium tuberculosis SUMu009] gi|308359422|gb|EFP48273.1| hypothetical protein TMJG_04030 [Mycobacterium tuberculosis SUMu010] gi|308363326|gb|EFP52177.1| hypothetical protein TMKG_03519 [Mycobacterium tuberculosis SUMu011] gi|308366984|gb|EFP55835.1| hypothetical protein TMLG_04051 [Mycobacterium tuberculosis SUMu012] gi|323720771|gb|EGB29842.1| hypothetical protein TMMG_03867 [Mycobacterium tuberculosis CDC1551A] gi|326904969|gb|EGE51902.1| hypothetical protein TBPG_02893 [Mycobacterium tuberculosis W-148] gi|328457537|gb|AEB02960.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 368 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 93/286 (32%), Gaps = 52/286 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L +I T V LP + + L QG++ I T Sbjct: 39 SHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 L+ + + + L+ L S V +++ P + Sbjct: 98 LDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWL 157 Query: 101 VLSWNQEHTFS----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + + +R AD R + I Y R+ Sbjct: 158 AVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRAD--WQRRLTQAGVRPAGIWAYEAHRVA 215 Query: 151 HGIVDPNTDF---LPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 H + PH+ + L KGCY GQE V+R+ + + Sbjct: 216 HRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRML 275 Query: 205 MIITGTDDL--PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 +++ + + P +G +L +G LG VV G ALA+ + Sbjct: 276 VLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLK 321 >gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923] gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae] gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 366 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 98/309 (31%), Gaps = 47/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L +I T V LP + + L QG++ I T Sbjct: 39 SHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQNLSLDSQGRVE-DHWIQTELGGTTY 97 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 L+ + + + L++ L S V ++ P Sbjct: 98 LDTEPWRGEPLLEYLRKMVFWSEVTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDEST 157 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHG 152 + D+L+ R + + ++ + Y R+ Sbjct: 158 AVPLTAGSFVRRIPGAPAGQIELDLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVAAL 217 Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+Q+ + +++ Sbjct: 218 RPRLGVD-TDQRTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHL 276 Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHG 261 + +G +L + +G LG VV G ALA+ R D + + G Sbjct: 277 DGSVERTSTGDAVLANSGAVGRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDG 336 Query: 262 VRVKASFPH 270 P Sbjct: 337 SVAAVIDPD 345 >gi|327542384|gb|EGF28867.1| aminomethyltransferase [Rhodopirellula baltica WH47] Length = 342 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 65/323 (20%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFL 56 +S + L S + + G A L + T DV L + + + +GK L + + Sbjct: 5 LSLIRLPALSIVDLVGADATAILHNLTTNDVKKLTADGPQHAGLETFITNVRGKCLGHVV 64 Query: 57 ISKIEEDTFILEIDRSKR-----------DSLIDKLLFYKLRSNVI--IEIQPINGVVLS 103 + ++ ++ ++ + Y +R + I + + ++ Sbjct: 65 VFATQDGYRMIGAPGIVATADNSGTVRQSQAIAEHADRYTIREDATPVIRDEELAAWMVI 124 Query: 104 WNQEHTFSNSSF--------------------------IDERFSIADVLLHRTWGHNEKI 137 + ID ++ R E + Sbjct: 125 DGDAEPVQTTPLPNMTNQDGVESYQLPWVKSGTLFLLPIDTAAEHPSLIADRLGVSAEAL 184 Query: 138 A-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 A D +H R+ G D + P +A + IS TKGCY+GQE V+R+ Sbjct: 185 AMGDENDFHAHRVAAGFPWFGIDLTDAH-LPQEADRE-TQTISFTKGCYLGQETVARLDA 242 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD-----------IEIGTLGVV------VGKKAL 239 ++K+ + P G+ DD +G + V A+ Sbjct: 243 LGQVQKKLVRWKLAG--LPPGAEPAADDKLRALDAPEDAKPVGRITSVGRIDDQGEGLAM 300 Query: 240 AIARIDKVDHAIKKGMALTVHGV 262 AR + K ++ V Sbjct: 301 GYARRSHFEAGAKLAGMISAGDV 323 >gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN] gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae] Length = 373 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 98/309 (31%), Gaps = 47/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+++ + + G +L +I T V LP + + L QG++ I T Sbjct: 46 SHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQNLSLDSQGRVE-DHWIQTELGGTTY 104 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100 L+ + + + L++ L S V ++ P Sbjct: 105 LDTEPWRGEPLLEYLRKMVFWSEVTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDEST 164 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHG 152 + D+L+ R + + ++ + Y R+ Sbjct: 165 AVPLTAGSFVRRIPGAPAGQIELDLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVAAL 224 Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D PH+ + L KGCY GQE V+R+Q+ + +++ Sbjct: 225 RPRLGVD-TDQRTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHL 283 Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHG 261 + +G +L + +G LG VV G ALA+ R D + + G Sbjct: 284 DGSVERTSTGDAVLANSGAVGRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDG 343 Query: 262 VRVKASFPH 270 P Sbjct: 344 SVAAVIDPD 352 >gi|116075586|ref|ZP_01472845.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916] gi|116066901|gb|EAU72656.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916] Length = 280 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 96/271 (35%), Gaps = 23/271 (8%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G FL +A + P + + LT G++ LL + D +L Sbjct: 16 LLRLTGGGTRQFLHGQTSAAIEQAPEQSLIHTCWLTATGRVRALLEVRLDGEGADVLVLC 75 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D D+++F R V +P V + + D+ A L Sbjct: 76 GDADAVLEGFDRVIFPADRVKVN-AAEPQRRV---QRLQPAPEPLQWQDDVVWPASHPLP 131 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 W +D + + RI+HG+ + + P + + +SL KGCY+GQ Sbjct: 132 DPWAALP--VADPEQLEQWRISHGLPLSSQEL-NGETNPLELGLADW--VSLEKGCYLGQ 186 Query: 189 EVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVGK----KAL 239 E V+++ R+ ++++ T G LP +G + G + + L Sbjct: 187 ETVAKLVSRDGVKQKLRCWTIPQQDGNTPLPQAGDTLHVAGERAGVITSSQKTGQCLQGL 246 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+ R +DH V P Sbjct: 247 ALVRRGCLDHPTLTWGP---QETEVNVHQPP 274 >gi|20806817|ref|NP_621988.1| glycine cleavage system aminomethyltransferase T [Thermoanaerobacter tengcongensis MB4] gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM 12653] gi|24636853|sp|Q8RCV9|GCST_THETN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|20515282|gb|AAM23592.1| Glycine cleavage system T protein (aminomethyltransferase) [Thermoanaerobacter tengcongensis MB4] gi|214035115|gb|EEB75828.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM 12653] Length = 374 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 100/314 (31%), Gaps = 61/314 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK A PFLQ ++T D+ L + + G ++ L+ K + ++ Sbjct: 58 SHMGEIIVKGKDAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYL 117 Query: 67 LEIDRSKRDSLIDKLL----FYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE--- 118 L ++ + + +L Y V IE + + + DE Sbjct: 118 LVVNAANIEKDYKWMLNNAGIY----KVEIENVSDKIAELAIQGPKAEEILQKLTDEDLS 173 Query: 119 ---------------------RFSIADVLLHRTWGHN-------EKIASDIKTY------ 144 R + N EKI K Y Sbjct: 174 QIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAG 233 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR G+ + I P +A + + KG +IG++ + + + + + Sbjct: 234 LGARDTLRFEAGLPLYGNELG-EDITPLEAGLGFF--VKFDKGNFIGKDALLKQKEQGLK 290 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254 RK + +P G + D+ +IG + LA+ ID I Sbjct: 291 RKLVGFEMIGNGIPRHGYEVQADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQIGNQ 348 Query: 255 MALTVHGVRVKASF 268 + + + +KA Sbjct: 349 IEVIIRNKPLKAVI 362 >gi|332671869|ref|YP_004454877.1| folate-binding protein YgfZ [Cellulomonas fimi ATCC 484] gi|332340907|gb|AEE47490.1| folate-binding protein YgfZ [Cellulomonas fimi ATCC 484] Length = 399 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 104/324 (32%), Gaps = 66/324 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S ++V G + +L +I + D+ TLP + + +L+PQG + + E T++ Sbjct: 67 SQLGVVRVAGPDRLTWLHSITSQDLATLPPRTSTELLVLSPQGHVEHAAGVVDDGEATWL 126 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSWNQEHTF-- 110 L +L L K V I ++W Sbjct: 127 L---TETPVALAAWLDRMKFMLRVEITDATDEWAAIGEPVDAEGTPDEPVTWRDPWPATA 183 Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINHGIV 154 + D+ AD +++ ++ +R+ Sbjct: 184 PGGTRYGAPDDEHPGADRAWRLVLVPRDRLVDEVRAREAAGWPLVGTWAAEAVRVEALRP 243 Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212 + + PH+ +D L + L KGCY GQE V+R+ + +R +++ Sbjct: 244 RAARE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRVVLLHLDGSG 300 Query: 213 --LPPSGSPILT---------DDIEIGTLGVVV-----GKKALAIAR----------IDK 246 LP +G+ + +G + V G ALA+ + +D Sbjct: 301 HLLPEAGAAVHDVVGDAGSPEPGRAVGHVTTVARHHELGPVALAVVKRSVPVDAPLVVDC 360 Query: 247 VDHAIKKGMALTVHGVRVKASFPH 270 + G V G V P Sbjct: 361 EGGVVAAGQEEVVPGEGVSVDRPA 384 >gi|257069685|ref|YP_003155940.1| folate-binding protein YgfZ [Brachybacterium faecium DSM 4810] gi|256560503|gb|ACU86350.1| folate-binding protein YgfZ [Brachybacterium faecium DSM 4810] Length = 369 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 104/280 (37%), Gaps = 42/280 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V L + ++V G A ++ I T + P + A+L+PQG++ I+ED Sbjct: 43 VDLGHFELLEVRGADARSWMTTITTQVLDGTPVGASSSLAVLSPQGRVEHLASAVVIDED 102 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------------------- 103 +L +D R L L + + V + + + + Sbjct: 103 ALLLIMDPGARAGLRRYLEMMRFAARVELTDRDDLRTLGALSPAAEVLPQLGLPEPVAVW 162 Query: 104 ---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIV 154 W Q + D + VL E++ + + ++ LRI Sbjct: 163 SEPWPQLAPGGVAYGPDPEDPVGAVLTVLDGAALEQLPWRREHLAGMSSWEALRIADHRA 222 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD 212 + + PH+ + L + TKGCY GQE V+++ + +R +++ G+ D Sbjct: 223 RGARE-VDGRSIPHELDL-LRTTVHTTKGCYRGQETVAKVLNLGQPPRRLVMLHLDGSQD 280 Query: 213 LP-PSGSPILTD---DIEIGTLGVV-----VGKKALAIAR 243 +P +G + IGT+ +G ALA+ R Sbjct: 281 VPVAAGGEVRLGGPEGKVIGTVTSAGLHVDLGPIALAVVR 320 >gi|322370098|ref|ZP_08044660.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253] gi|320550434|gb|EFW92086.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253] Length = 372 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 106/318 (33%), Gaps = 69/318 (21%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + V G I ++ I++ V + + +L PQGK+ L + + +L Sbjct: 47 YGVLVVSGDDRIEYVDNIVSNTVPS-EDGRGTYALLLDPQGKVELDMYVY-CAGEQLLLF 104 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQ-------EHTFSNSSFIDE-- 118 + + L ++ K+ V I + VV + + +S DE Sbjct: 105 VPPGEATPLAEEW-REKVFIQDVEISVATERFVVFGVHGPYATEKVASVLNGASTPDEQL 163 Query: 119 ---RFSIADVLLHRTWGHNEKIASDIK--------------------------------- 142 R +ADV + + Sbjct: 164 SFIRGKMADVGVTVIRTDAPTGEEGYEVVCTTDETADEIGRERPNVELVFDALVTRGMNA 223 Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 T+ L + G ++ P ++ L N + KGCY+GQEVVSR+++ Sbjct: 224 APFGRVTWESLTLEAGTP--LFEYELRGEIP--NVLGLRNALDFEKGCYVGQEVVSRVEN 279 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250 R +R + + +P +G+ + D +G + + A+A+ D Sbjct: 280 RGQPSRRLAGLL-PESVPEAGAAVFAGDEVVGEVTRGIESPSRGEPAAMALVNYD---VE 335 Query: 251 IKKGMALTVHGVRVKASF 268 I G+ + + G V A Sbjct: 336 IGSGLTVRIDGEDVGAEL 353 >gi|254385545|ref|ZP_05000871.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194344416|gb|EDX25382.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 322 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 23/283 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS++ I V G + +L ++T + LP A + IL+ G I + + + Sbjct: 43 VDLSHRGVITVTGPERLSWLHLLLTQHLTELPAGQATEALILSANGHIEHALYLV-DDGE 101 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121 T ++ +++L+ L K V + + + V++ + + E Sbjct: 102 TVWAHVEPGTQEALLAYLESMKFFYRVEVADRTADFAVVNLPAGSIAEVAKELVVRETPY 161 Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 DV L R + + A+ + Y LR+ + PH+ + Sbjct: 162 GRDVFLPRAELEAFAASHGPAAGLLAYEALRVEAHRPRLGQE-TDHRTIPHELGW-IGTA 219 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229 + L KGCY GQE V+R+ + +R + + LP G+P+ + ++G Sbjct: 220 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPLRLAADGEEGRQLGF 279 Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266 + V G ALA+ R VD + G V V Sbjct: 280 VTTAVRHHELGPIALALVKRNVPVDAPLLAGKTAAAQEVVVAP 322 >gi|297563263|ref|YP_003682237.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847711|gb|ADH69731.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 340 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 92/281 (32%), Gaps = 31/281 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ ++V G + +L + + L A + +L +G + + + E T Sbjct: 45 SNRGVVRVTGPDRLGWLNDLTSQLTRGLAPGTATEALVLDTKGHLRHHLSLVDDGEAT-W 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 + + L L + V +E + VLS + + E S+ DV Sbjct: 104 IHTEPGDGPELAGFLDSMRFMLRVEVEDLSGSHAVLSVLG----PDRAKAVEAASLGDVT 159 Query: 127 LHRTWGHNEKIASDI-------------------KTYHELRINHGIVDPNTDFLPSTIFP 167 G + Y RI V D P Sbjct: 160 ARAVEGETDLFVPAERLVGAAEALTAAGARPAGMWAYEANRIAEHRVRAGLD-TDDRTIP 218 Query: 168 HDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTD 223 H+ D + + L KGCY GQE V+R+ + +R +++ LP G+ I D Sbjct: 219 HEV--DWVGRAVHLEKGCYPGQETVARVHNLGRPPRRLVMLHLDGTAERLPQVGAAIELD 276 Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +G +G L + V + L V G+ Sbjct: 277 GRSVGRVGTSARHHELGPIALGVVKRSAPTDADLVVDGIAA 317 >gi|224008166|ref|XP_002293042.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971168|gb|EED89503.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 591 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 98/340 (28%), Gaps = 144/340 (42%) Query: 7 SNQSFIKVCG-KS-AIPFLQAIIT------------------ADVLTLP----------- 35 + + + V G A +LQ ++T + LP Sbjct: 17 TTRRILSVTGTSDHATTYLQGLVTSDLFSEPRAPREEAEDSLNALSGLPLHGAEGAVEAG 76 Query: 36 -----------------------YKIARGSAILTPQGKILLYFLISKIEEDT-------- 64 R + L +G+IL L+ K D+ Sbjct: 77 VAAAHAGGSGGSVPVEEEVPVRFTSKMRSTCFLDHRGRILTDALLWKRTIDSNGSTINDN 136 Query: 65 -------------------FILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQP----INGV 100 +++++ S D L L +KLR S + +E + ++ V Sbjct: 137 TTTSSDTTATTANAKTTTEYLIDVPSSTADLLFAHLKQHKLRRSKIKLEDKSEQLSVHAV 196 Query: 101 VLSWNQEHTFSNS-SFIDERFSIADVLLHRTWGHNEKIASDIKT---------------- 143 + N E + +D R + + +E IA D Sbjct: 197 YGTLNAEGAPKGYLAAMDPRHPSLGMRV--LSVGDEVIAQDDDDLGTTTSAGDVSDENDD 254 Query: 144 ------------------------------------YHELRINHGIVDPNTDFLPSTIFP 167 Y LR GI + + + T Sbjct: 255 TTNNTTTSTPTVSERTKRTTHFTKLMNNFFPHHPGTYSVLRRLSGIAEGS-ELTTRTAL- 312 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + + LN IS TKGCY+GQE+ +R Q ++RKR + + Sbjct: 313 -ECNQEFLNAISFTKGCYLGQELTARSQFVGVVRKRIVPV 351 >gi|318042765|ref|ZP_07974721.1| aminomethyltransferase GcvT-like protein [Synechococcus sp. CB0101] Length = 300 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 97/282 (34%), Gaps = 33/282 (11%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILEI 69 I++ G A FL + + P + +++P G++ L + D +L+ Sbjct: 16 IRLEGADARRFLHGQSSQAIELAPSGACLPTCLISPTGRMRALALVRLDDTGADLLVLDG 75 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 D + +D++LF R V + +V + ++ + Sbjct: 76 DGAAVHQALDRVLFPADR--VKLGAFEPATLVRWIGDAASEPGPQLLNPGVDLGAGAEQP 133 Query: 130 TWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 W A + R+ G ++ T P + + +S Sbjct: 134 AWLQQPGEALPAWLEALPELSAEATEQQRLRQGFPAAPSEL-NDTTNPFELGLAPW--VS 190 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------LPPSGSPILTD-DIEIGTLGV 232 L KGCY+GQE ++++ + ++++ +D G+ + T+ G + Sbjct: 191 LNKGCYVGQETLAKLATYDGVKQQLRHWRCSDAGSAAVSACAPGTSLTTEAGERAGVITS 250 Query: 233 VV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + G + LA+ R ++ L + ++ S P Sbjct: 251 ALAGPDGLEGLALVRRGALEEP-----QLLAGEMPLEISVPA 287 >gi|184200222|ref|YP_001854429.1| hypothetical protein KRH_05760 [Kocuria rhizophila DC2201] gi|183580452|dbj|BAG28923.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 410 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 76/323 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + + V G + +L + + + L + L+ QG+I + + T Sbjct: 52 SQRGVVTVTGPDRLSWLTTLSSQVLTGLEPGRGTETLFLSVQGRIEFAPHVL-DDGTTTW 110 Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLS--------------WNQEHTF 110 L + + L D L + LR V ++ P V+ + Sbjct: 111 LVTEADEAPGLADWLTSMRFALRVEVQ-DVSPQWAVLGATRDLGGRMAELLSAGPATEVS 169 Query: 111 SNSSFIDERFSIADVLLHR-------------------------------TWGHNEKIAS 139 + + + + A VL+ R G ++ + Sbjct: 170 PHDAAGEPSVTSAHVLVWRDPWPDVAEGGHGYTTTPEHPGRSRAWFEHLVPLGALPEVVA 229 Query: 140 DI----------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQ 188 + LRI + PH+ +D + + L+KGCY GQ Sbjct: 230 GLEREGIGLAGSWAAEALRIEAWRPRWGAE-TDEKTIPHE--LDWMRTAVHLSKGCYKGQ 286 Query: 189 EVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVV-----VGKKALA 240 E V+R+ + +R + LP +G+ + +G + G ALA Sbjct: 287 ETVARVHNLGHPPRRLTFLDLDGSQHTLPEAGATVEAGGRVVGRVTAAQLHHEAGPIALA 346 Query: 241 IARIDKVDHAIKKGMALTVHGVR 263 + + ++ LTV Sbjct: 347 VLK-----RSVDPEAVLTVRDTP 364 >gi|38048683|gb|AAR10244.1| similar to Drosophila melanogaster CG8043 [Drosophila yakuba] Length = 170 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLIS 58 + L N+ I+V G +PFLQ + T DV + + + L G++L ++ Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILY 98 Query: 59 KI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW 104 + +T ++E DR L Y++R IE+ ++ +W Sbjct: 99 RTNNPETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTW 143 >gi|295394451|ref|ZP_06804674.1| folate-binding protein YgfZ [Brevibacterium mcbrellneri ATCC 49030] gi|294972630|gb|EFG48482.1| folate-binding protein YgfZ [Brevibacterium mcbrellneri ATCC 49030] Length = 344 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 103/295 (34%), Gaps = 37/295 (12%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS+ S + + G ++ +L ++ T + + + +L+P G I + + + +D Sbjct: 34 ADLSSMSILTLTGPDSLTWLNSLTTQKLDVAQPGTSTETLVLSPTGHIEHWAYVY-VADD 92 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------- 108 L ID + L + L K V I V+ N E Sbjct: 93 CVWLLIDGDGKP-LQEFLESMKFMMRVDIRDVSDEYTVVGSNGEVENLEPVIQWIDPWPN 151 Query: 109 -TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 T +S++ D S D L+ + LRI D T Sbjct: 152 ITPGGTSYVAVKDHPGSAFDFRLNVCRDREGLNIVGRDAWEALRIEAWRP-AVADCDHKT 210 Query: 165 IFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPI 220 + +D+L G+ L KGCY GQE V+R+ + + +R + + + G PI Sbjct: 211 LV---GEIDVLRTGVHLAKGCYRGQEAVARVHNLGQVPRRLVFLHLDGSEHAVVSPGDPI 267 Query: 221 L----TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV----HGVRVKAS 267 L + ++G + L + V + L V RV A+ Sbjct: 268 LGPARGAERQVGAVTSAAIHYELGPIALGLVKRTVDPEAELAVLSDDGNTRVSAT 322 >gi|148238616|ref|YP_001224003.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. WH 7803] gi|147847155|emb|CAK22706.1| Predicted aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. WH 7803] Length = 290 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 96/273 (35%), Gaps = 23/273 (8%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTF 65 + + +++ G FL +A V P + L G++ LL + D Sbjct: 16 HFAVVRLEGSGCAGFLNGQTSAKVEGAPSGPIIQACWLNATGRLQALLELRLDDQGADVL 75 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L D + +D+++F R V + + + + + + + D Sbjct: 76 VLNGDADQLAQGLDRVIFPADR--VRLGAPRQQRRLQHLSSDQAPGVETVL---WLDDDA 130 Query: 126 LLHRTWGHNEK-IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 ++ W + A+D++ + R+ G + P + + ++L KGC Sbjct: 131 IVPAPWNQTQACTAADLERW---RLQQGWPLGAEEIT-GDTNPFELGLAGW--VNLDKGC 184 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVG------ 235 Y+GQE ++++ R ++++ D G ++ + G + V Sbjct: 185 YLGQETLAKLGSRGAVKQQLRCWQCADPGAADLQPGDALVLNGERAGRITSVADPNGTEP 244 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + LA+ R ++ + + + Sbjct: 245 RLGLALIRRQALEATTLQSEPTDSRPHPLTVTV 277 >gi|292654574|ref|YP_003534471.1| folate-binding protein YgfZ [Haloferax volcanii DS2] gi|291372801|gb|ADE05028.1| folate-binding protein YgfZ [Haloferax volcanii DS2] Length = 365 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 109/308 (35%), Gaps = 60/308 (19%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + V G+ + ++ +T D + + +L P G+I + E ++ Sbjct: 48 YGVVVVEGEDRVDYVDNAVT-DTVPDEDGEGVYALLLDPDGRIETEMYVYNAGE-RLLIF 105 Query: 69 IDRSKRDSLIDK------LLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFI 116 R + + L+++ L K+R + GV + T S + Sbjct: 106 TPRDRAEPLVEEWGSKTFLQRVKIR-----DASDEFGVFGVHGPQSTEKVASILSGAGAP 160 Query: 117 DERFSIA----------------------------------DVLLHRTWGHNEKIASDIK 142 + S DVL + N + + Sbjct: 161 EPELSFVRGSIGGELGVTVVASDNPTGEEGYDVICRAKDAEDVLDALLFYGNPSVPVGYR 220 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T+ L G ++ + P+ A + N + KGC++GQE+VS+I++R + Sbjct: 221 TWDSLTAEAGTPLFESELRGN--VPNVAG--VRNALDFDKGCFVGQELVSKIENRGRPSR 276 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIK-KGMALTVH 260 R + D LP SG+ + D +GT+ V L A VD+ + + + V Sbjct: 277 RLVGFRA-DALPDSGAEVSADGESVGTVTRAVESPMLDAPIGFALVDYGLDTDALKVAVD 335 Query: 261 GVRVKASF 268 G RV+A+ Sbjct: 336 GDRVEATR 343 >gi|110668998|ref|YP_658809.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] gi|109626745|emb|CAJ53212.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] Length = 373 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 100/281 (35%), Gaps = 51/281 (18%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67 I V G I F+ ++ V T+ + +L P G+I + + L Sbjct: 48 YGVITVEGDDRIEFVDDTLSNQVPTVD-GQGVYALLLDPNGRIKTDIYVYNADNRLLCLT 106 Query: 68 --EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---NSSFIDE---- 118 ++ + D++ +R NV E + GV + E S + + Sbjct: 107 PPDVAADLAEQWADRVFIKDVRVNVASEEFAVFGVHGPQSTEKVASVLNGAGAPEPSLTF 166 Query: 119 -RFSIADVLLHRTWGHNEK--------IASDIKT--------------------YHELRI 149 R S+ D + G N ++D+ ++ L + Sbjct: 167 VRGSMGDEGVTVIAGDNPLGEESYQVVCSADVADRILETLLTYGLNGVPFGYQVWNTLAV 226 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G NT+ P ++ + N + KGCYIGQE+VS++++R KR + + Sbjct: 227 EAGTPRFNTELADQ--IP--NVLGIRNALDFEKGCYIGQEIVSKVENRGQPSKRLVGLRL 282 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARI 244 + + S + D +GT+ VV ALA+ Sbjct: 283 -NQMAEVDSTVTADGDAVGTITSVVESPSIETPIALALINF 322 >gi|148359116|ref|YP_001250323.1| aminomethyltransferase-like glycine cleavage T protein [Legionella pneumophila str. Corby] gi|148280889|gb|ABQ54977.1| aminomethyltransferase-like glycine cleavage T protein [Legionella pneumophila str. Corby] Length = 329 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I G+ +I FLQ +T D+ + A +G+IL I + Sbjct: 36 LSYLGVIDFLGEKSIDFLQGQLTCDLRLVSDVSMIQGAQCNLKGRILSLLDIINWQG--V 93 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + + L L S V I N +L + +H+ + S Sbjct: 94 KLVLPQDLIEVTQHSLNKVALLSRVKI-TSNNNYKILGFYLQHSNDQIPQLLPLSSELYA 152 Query: 126 L---------------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 L L + + N ++ + T+H LR+ + +D Sbjct: 153 LSCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYP 211 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216 + PH + +S KGCY GQE+++R +R ++ +I + L S Sbjct: 212 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 269 Query: 217 GSPIL--TDDIEIGTL 230 G + +DIE+G L Sbjct: 270 GQKLFKSDEDIEVGEL 285 >gi|213026049|ref|ZP_03340496.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 200 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------- 101 + + + +E RS R++ + +L Y + S V+I ++ Sbjct: 1 MRLFRERDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALAN 59 Query: 102 -----------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTY 144 + + T ERF + A++L + G E ++ + + Sbjct: 60 VFSELPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQW 117 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 L I GI + P + L GIS KGCY GQE+V+R + R ++ Sbjct: 118 LALDIEAGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAL 176 Query: 205 MIITGTDD-LPPSGSPI 220 ++ G +P +G + Sbjct: 177 WLLAGKASRVPEAGEDL 193 >gi|32470742|ref|NP_863735.1| aminomethyltransferase [Rhodopirellula baltica SH 1] gi|32442887|emb|CAD71406.1| conserved hypothetical protein-putative aminomethyltransferase [Rhodopirellula baltica SH 1] Length = 342 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 102/323 (31%), Gaps = 65/323 (20%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFL 56 +S + L S + + G A L + T DV L + + + +GK L + + Sbjct: 5 LSLIRLPALSIVDLVGADATAILHNLTTNDVKKLTADGPQHAGLETFITNVRGKCLGHVV 64 Query: 57 ISKIEEDTFILEIDRSKR-----------DSLIDKLLFYKLRSNVI--IEIQPINGVVLS 103 + ++ ++ ++ + Y +R + I + + ++ Sbjct: 65 VFATQDGYRMIGAPGIVATADNSGTVRQSQAIAEHADRYTIREDATPVIRDEELAAWMVI 124 Query: 104 WNQEHTFSNSSF--------------------------IDERFSIADVLLHRTWGHNEKI 137 + ID + R + E + Sbjct: 125 DGDAEPVQTTPLPNMTNQDGVDSYQLPWVKSGTLFLLPIDTAAEHPSRIADRLGVNAESL 184 Query: 138 A-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 A D +H R+ G D + P +A + IS TKGCY+GQE V+R+ Sbjct: 185 AMGDENDFHVHRVAAGFPWFGIDLTDAH-LPQEADRE-TQTISFTKGCYLGQETVARLDA 242 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD-----------IEIGTLGVV------VGKKAL 239 ++K+ + + P+G+ DD +G + V A+ Sbjct: 243 LGQVQKKLVRWKLSG--LPAGAEPAADDKLRALDAPEDAKPVGRITSVGRIDDQGEGLAM 300 Query: 240 AIARIDKVDHAIKKGMALTVHGV 262 AR + K ++ V Sbjct: 301 GYARRSHFEAGEKLAGMISAGDV 323 >gi|213162057|ref|ZP_03347767.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 254 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------- 101 + + + +E RS R++ + +L Y + S V+I ++ Sbjct: 1 MRLFRERDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALAN 59 Query: 102 -----------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTY 144 + + T ERF + A++L + G E ++ + + Sbjct: 60 VFSELPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQW 117 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 L I GI + P + L GIS KGCY GQE+V+R + R ++ Sbjct: 118 LALDIEAGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAL 176 Query: 205 MIITGTDD-LPPSGSPI 220 ++ G +P +G + Sbjct: 177 WLLAGKASRVPEAGEDL 193 >gi|227876313|ref|ZP_03994426.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227843086|gb|EEJ53282.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 449 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 98/298 (32%), Gaps = 68/298 (22%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL Sbjct: 71 LGVIRVSGDSRLSWLETVTTQKLAGLAPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 129 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108 ++ L + RS V I VVL + Sbjct: 130 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 187 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136 + +ID T Sbjct: 188 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 247 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + +D+ + +RI + +P PH+ L + +SL KGCY GQE V+++ Sbjct: 248 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVSLNKGCYTGQETVAKLV 305 Query: 196 HRNIIRKRPMIITGTD---DLPPSGSPILTD--DIEIGTLGVVV-----GKKALAIAR 243 +R +R + + +LP G+ + +G L V G+ AL + + Sbjct: 306 NRGRPPRRLVFLDLDGTSEELPRIGTELRLAMTGEPVGNLTSVAYHPTDGQIALGVVK 363 >gi|170783039|ref|YP_001711373.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. sepedonicus] gi|169157609|emb|CAQ02807.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. sepedonicus] Length = 384 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 117/315 (37%), Gaps = 56/315 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS+++ + V G+ + +L +I + + L + + L G++ + Sbjct: 49 AIVDLSHRAVLSVTGEDRLTWLDSITSQSLRGLAPGDSAETLFLDQNGRLEHAVGVLDDG 108 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------IEIQPINGVVLS 103 T++L + SL+ L + V + + GV L Sbjct: 109 VSTWLL-LGAGDAASLLAYLQRMRFMLRVEPADRTAEMAVIGTLGEPDLPVAAPAGVPLV 167 Query: 104 WNQEHT---------FSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHE 146 W + +S E ++ ++ L+ R+ + + + Sbjct: 168 WRDPWAHVVPGGHQYAAAASHPGEGWTWSERLVPRSELPGVAARAASGDLPVAGVLAAEA 227 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI T+ + PH+ L + + L+KGCY GQE V+++ + +R ++ Sbjct: 228 LRIAAWRPRFATE-VDDRTIPHELDW-LRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVL 285 Query: 207 ITGTDD---LPPSGSPIL-------TDDIEIGTLGVVV-----GKKALAIARIDKVDHAI 251 + LP +GS + +G++ G ALA+ R VD A+ Sbjct: 286 LQLDGSDAVLPGAGSEVRLPAADDGAPGEVVGSVTSSALHHELGPVALAVVR-RNVDPAL 344 Query: 252 KKGMALTVHGVRVKA 266 + + + VRV+A Sbjct: 345 Q--LEVVADDVRVQA 357 >gi|260905834|ref|ZP_05914156.1| glycine cleavage T protein (aminomethyl transferase) [Brevibacterium linens BL2] Length = 400 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 104/296 (35%), Gaps = 52/296 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V L++ +++ G + +L +I T + TL +A + +L P G+I + ++ Sbjct: 65 AIVDLAHLRILRLSGADRLTWLNSITTQKLDTLAPGVATETLVLDPNGRI--EGWLKLVD 122 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLS----------WNQE 107 + + I + D ++ L V IE G +++ W Sbjct: 123 DGETLWAISELRTDDTLEFLRKMVFMMRVTIEDVSDEFQCIGALVALPDSLPVTQLWTDP 182 Query: 108 HT-----FSNSSFIDERFSIADVLLH----------------RTWGHNEKIASDIKTYHE 146 ++ + +D +A R N+ + + Sbjct: 183 WPHIGTGSASYAQVDLGLGVAGEDHPGLETQFVIGIIARADLRATSANDFTMAGFDAWEA 242 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI P + + + + L + L KGCY GQE V+R+ + +R + Sbjct: 243 LRIAAW--RPGVNEIDHKSLVGELDL-LRTSVHLAKGCYRGQEAVARVHNLGQPPRRLVF 299 Query: 207 ITGTDD---LPPSGSPILTD----DIEIGTLGVVV-----GKKALAIARIDKVDHA 250 + P +G+ +L + + +G L V G LA+ + + A Sbjct: 300 VHLDGSGHIQPEAGAEVLAEVRGAERSVGQLSSVALHWELGPIGLAVVKRNLSAEA 355 >gi|302835551|ref|XP_002949337.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f. nagariensis] gi|300265639|gb|EFJ49830.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f. nagariensis] Length = 475 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 109/310 (35%), Gaps = 60/310 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G+ L TAD L + +T + L + + + + Sbjct: 86 SHWGRLRVTGEDRTALLHNQSTADFQRLQPGQCADTTFVTSTARCL-DLATALVLPSSIL 144 Query: 67 LEID-RSKRDSLIDKLLFYKLR----------------------SNVII-EIQP--INGV 100 L +D R ++L +L R + V++ E+ P ++GV Sbjct: 145 LLVDSREGGEALAARLDKVIFRGDNVMVHDISSRTGQIAVLGPEAEVVLRELAPDVLSGV 204 Query: 101 VLSWNQEHTF----SNSSFIDERFSIADVLLHRTWGHNEKIASDI--------------K 142 + H F+ + + T +E +A D+ Sbjct: 205 LSGPPGRHVLVGFRGKPVFVAAVSGLGLSVPGYTLVADEAVAGDLYAAFAAKGAIPMGTD 264 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + RI G ++ P +A + +SL KGCYIGQE ++++ R+ + + Sbjct: 265 DWEAARIVAGRPTRGSELT-EAYSPLEAGL--YGAVSLNKGCYIGQETLAKLHLRDGVNR 321 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMAL 257 + + + P G+ I ++ ++G + + R + +G + Sbjct: 322 QLWGLRLSGPTSP-GAEIYSELSKVGVVTSTCQDADGEWVGVGYLR------SRLEGTQI 374 Query: 258 TVHGVRVKAS 267 + GVRV + Sbjct: 375 ELEGVRVAVA 384 >gi|269976111|ref|ZP_06183110.1| glycine cleavage T protein [Mobiluncus mulieris 28-1] gi|307701532|ref|ZP_07638550.1| glycine cleavage T-protein C-terminal barrel domain protein [Mobiluncus mulieris FB024-16] gi|269935704|gb|EEZ92239.1| glycine cleavage T protein [Mobiluncus mulieris 28-1] gi|307613324|gb|EFN92575.1| glycine cleavage T-protein C-terminal barrel domain protein [Mobiluncus mulieris FB024-16] Length = 415 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 99/298 (33%), Gaps = 68/298 (22%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL Sbjct: 37 LGVIRVSGDSRLSWLETVTTQKLAGLAPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 95 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108 ++ L + RS V I VVL + Sbjct: 96 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 153 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136 + +ID T Sbjct: 154 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 213 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + +D+ + +RI + +P PH+ L + +SL KGCY GQE V+++ Sbjct: 214 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVSLNKGCYTGQETVAKLV 271 Query: 196 HRNIIRKRPMIITGTD---DLPPSGSP--ILTDDIEIGTLGVVV-----GKKALAIAR 243 +R +R + + +LP G+ + T +G L V G+ AL + + Sbjct: 272 NRGRPPRRLVFLDLDGTSEELPRIGTELRLATTGEPVGNLTSVAYHPTDGQIALGVVK 329 >gi|291333965|gb|ADD93642.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C694] Length = 119 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 2/115 (1%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +LR+++ I + ++ + + + L+G+ KGCY+GQEV +R++H+ +RK Sbjct: 2 DKLRVDYVIPEYGSELT-EESYILEMGFERLHGVDFKKGCYVGQEVTARMKHKTELRKGL 60 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 + I ++ +G +L DD IG++ GK ALA R+ D + + + Sbjct: 61 VKILSQHEI-SNGEELLLDDKSIGSILTTYGKSALAYVRLKNRDAILSTKNSKKI 114 >gi|154296574|ref|XP_001548717.1| hypothetical protein BC1G_12695 [Botryotinia fuckeliana B05.10] gi|150843278|gb|EDN18471.1| hypothetical protein BC1G_12695 [Botryotinia fuckeliana B05.10] Length = 219 Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 16/102 (15%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYK-IARGSAILTPQGKILLYFLISK- 59 LS++ I + G ++ +LQ +IT D+ L SA L +G++L I K Sbjct: 61 TRLSSRRLISLRGPDSMKYLQGVITNDIYKEGLNSDKKGFYSAFLNAKGRVLNDVWIYKD 120 Query: 60 ------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 E + +++E+D + + L + Y++R+ Sbjct: 121 LYADRGKYGGKGKEGENWLIEVDAKEVEVLAKHIKRYRMRAK 162 >gi|113952781|ref|YP_729511.1| glycine cleavage system protein T [Synechococcus sp. CC9311] gi|113880132|gb|ABI45090.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily protein [Synechococcus sp. CC9311] Length = 284 Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 98/291 (33%), Gaps = 52/291 (17%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--LISKIEEDTF 65 N +++ G + FLQ +ADV + L G++ + D Sbjct: 9 NFPVLRLEGSGSRTFLQGQTSADVQQAEEGDLLPACWLDATGRVQALLEIRMDATGADVL 68 Query: 66 ILEIDRSKRDSLIDKLLF--YKLRSN---------VIIEIQPINGVVLSWNQEHTFSNSS 114 +L D+++F ++R ++++ QP+ V + W ++ ++ Sbjct: 69 VLAGAVDAVSQGFDRVIFPADRVRLKGIRQQRRQELLVQAQPMEPVNVFWTEDEPSAS-- 126 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 +RF ++ A++ RI G + T P + + Sbjct: 127 ---DRFPASE-------------AANATQLDRWRIGQGWPLSAGEL-DGTTNPFELGLSP 169 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRK-----RPMIITGTDDLPPSGSPILTDDIEIGT 229 + L KGCY+GQE V+++ + +++ R +P G+ + G Sbjct: 170 W--VHLNKGCYLGQETVAKLASKGEVKQQLRSWRAFSSELQGTVPQRGTVLRRQGERAGV 227 Query: 230 LGVVV----------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 + + LA+ R + ++L ++ P Sbjct: 228 ITSALEIASAEGLPQEWIGLALVRRQALADP---QLSLDNDQGSIQLFKPQ 275 >gi|306817204|ref|ZP_07450951.1| folate-binding protein YgfZ [Mobiluncus mulieris ATCC 35239] gi|304650006|gb|EFM47284.1| folate-binding protein YgfZ [Mobiluncus mulieris ATCC 35239] Length = 415 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 68/298 (22%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL Sbjct: 37 LGVIRVSGDSRLSWLETVTTQKLAGLDPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 95 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108 ++ L + RS V I VVL + Sbjct: 96 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 153 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136 + +ID T Sbjct: 154 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 213 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + +D+ + +RI + +P PH+ L + ++L KGCY GQE V+++ Sbjct: 214 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVALNKGCYTGQETVAKLV 271 Query: 196 HRNIIRKRPMIITGTD---DLPPSGSPILTD--DIEIGTLGVVV-----GKKALAIAR 243 +R +R + + +LP G+ + +G L V G+ AL + + Sbjct: 272 NRGRPPRRLVFLDLDGTSEELPRIGTELRLAMTGEPVGNLTSVAYHPTDGQIALGVVK 329 >gi|308070294|ref|YP_003871899.1| aminomethyltransferase (glycine cleavage system T protein) [Paenibacillus polymyxa E681] gi|305859573|gb|ADM71361.1| Aminomethyltransferase (Glycine cleavage system T protein) [Paenibacillus polymyxa E681] Length = 366 Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 106/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A FLQ + T DV L A+ S + P G ++ L+ + ++ Sbjct: 53 SHMGEFLVEGKEAEAFLQRVTTNDVSQLEPGQAQYSLLCYPDGGVVDDLLVYCKGPEHYM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 L ++ S D L+ + + S+V IE +L+ ++ Sbjct: 113 LVVNASNIDKDWGWLIRH-MPSSVHIENVSDALALLALQGPEAARIAAAVADTDITNLAS 171 Query: 115 ------------------------------FIDERFSIADVLLHRTWGHNEKIASDIKTY 144 L R+ I + + Sbjct: 172 FRFHENVPLFGAKALVSRTGYTGEDGFEFYVPAAEAPAVWEGLLRSGESYGLIPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + +TI P +A + + L KG +IG+E + R + + I RK Sbjct: 232 DTLRFEARLPLYGQEL-SATISPLEAGLGYF--VKLNKGDFIGREALQRQKDQGIPRKLI 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 + +P + P+ + IG + K+ L +A +D A+ + + + Sbjct: 289 GLEMIDRGIPRAHYPVFAEGQRIGEVTTGTQSPTLKRNLGLALVDSRFSALSTPLEVEIR 348 Query: 261 GVRVKASF 268 G R++A Sbjct: 349 GKRLRAEV 356 >gi|76155821|gb|AAX27094.2| SJCHGC03303 protein [Schistosoma japonicum] Length = 242 Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 47/89 (52%) Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 FS++ ++ + + DI YH R G+ + +F+ + P +A DL G+S Sbjct: 13 FSVSLFTVNDIFPSCDTHPLDISLYHTARWELGLPEGIKEFITNDTLPFEANTDLSGGVS 72 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 +KGCYIGQE+ +R +IR+R + I Sbjct: 73 FSKGCYIGQELTARTHFTGVIRRRYVPIK 101 >gi|146281603|ref|YP_001171756.1| aminomethyltransferase [Pseudomonas stutzeri A1501] gi|145569808|gb|ABP78914.1| predicted aminomethyltransferase [Pseudomonas stutzeri A1501] Length = 261 Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 36/234 (15%) Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------ 98 + F I E D ++L + + L Y + S + + + Sbjct: 1 MQSSFRIVP-EGDGYLLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIAGGDGT 59 Query: 99 ----GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YH 145 G+ LS + + I R L E++ + + + Sbjct: 60 LVSLGLDLSQASDSIVRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWL 119 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 ++ GI P + L G+S KGCY GQE+V+R+Q+ +++R Sbjct: 120 LDQVRAGIGQ-VFGSTRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLQ 178 Query: 206 IITGT---DDLPPSGSPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250 + +LP G + + + +G + G + LA+ + D Sbjct: 179 HLAVEGEPGELPAPGVELFSPVHNSSVGEVVLAATSADGIELLAVVQEDAAADG 232 >gi|148273681|ref|YP_001223242.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831611|emb|CAN02579.1| putative aminomethyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 384 Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 117/315 (37%), Gaps = 56/315 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V LS+++ + V G+ + +L +I + + L + + L G++ + Sbjct: 49 AIVDLSHRAVLSVTGEDRLTWLDSITSQSLRGLAPGDSAETLFLDQNGRLEHAVGVLDDG 108 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------IEIQPINGVVLS 103 T++L + SL+ L + V + + GV L Sbjct: 109 VTTWLL-LGAGDAASLLAYLQRMRFMLRVEPADRTAELAVIGTLGEPDLPVAAPAGVPLV 167 Query: 104 WNQEHT---------FSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHE 146 W + +S E ++ ++ L+ R+ E + + Sbjct: 168 WRDPWAHVVPGGHQYAAAASHPGEGWTWSERLVPRSELPAVVARAVSGELPVAGVLAAEA 227 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI T+ + PH+ L + + L+KGCY GQE V+++ + +R ++ Sbjct: 228 LRIAAWRPRFATE-VDDRTIPHELDW-LRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVL 285 Query: 207 ITGTDD---LPPSGSPILTDDIEIGTLGVVVGK------------KALAIARIDKVDHAI 251 + LP +GS + GT G VVG ALA+ R VD + Sbjct: 286 LQLDGSDAVLPGAGSEVRLPAAADGTPGEVVGAVTSSALHHELGPVALAVVR-RNVDPGL 344 Query: 252 KKGMALTVHGVRVKA 266 + + + VRV+A Sbjct: 345 Q--LEVVADDVRVQA 357 >gi|162454476|ref|YP_001616843.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56'] gi|161165058|emb|CAN96363.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56'] Length = 332 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 94/303 (31%), Gaps = 42/303 (13%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY----------KIARGSAILTPQGKILLYF 55 + + V G +L ++T D+ + GKI Sbjct: 23 MPELGTLIVTGSDRQTWLNGLVTCDLAPQKPLPAGAKAAPPAGGAYGLNVGKTGKIFAEV 82 Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------ 109 I I D + R + + L + + + + ++ + + Sbjct: 83 WIV-IAADRIYVGALRERVEQLRELFDRHLIMEDAEVQDASGEHAWAFVHGPRSADLAAA 141 Query: 110 ---------------FSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYHELRINH 151 + + R +L E + + LR+ + Sbjct: 142 GRAAGAEAAIVDWTGLGGALLVAPR-QAEGAVLEALLAEGEARAVLPVTAAAWEVLRVEN 200 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209 + DF FP +A ++ +S +KGCY+GQE V +Q R +KR + + G Sbjct: 201 NVPRFGVDFDDQN-FPQEASIED-RAVSFSKGCYLGQETVFMLQARGHAKKRLVQLAVEG 258 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK-KALAIARIDKVDHAIK-KGMALTVHGVRVKAS 267 +P L D +G + V + + + V + +G AL V G + + Sbjct: 259 EGGVPAGAEIALPDGAAVGAVTSQVEDPRGTGLLALGYVKYKHAVQGTALRVAGRAAEIT 318 Query: 268 FPH 270 Sbjct: 319 RAP 321 >gi|289577512|ref|YP_003476139.1| glycine cleavage system protein T [Thermoanaerobacter italicus Ab9] gi|289527225|gb|ADD01577.1| glycine cleavage system T protein [Thermoanaerobacter italicus Ab9] Length = 374 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+ Sbjct: 52 SHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLVYKYSDEHFL 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + ++ KL F Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYAVEINNISDEISELAIQGPKAEEVLQKLTDTDLSQIKF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142 + + NV I IN ++ +I +++I + + + Sbjct: 172 FYFKDNVKI--AGINSLISRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGVKRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G + D+ +IG + LA+ ID + + Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344 Query: 257 LTVHGVRVKASF 268 + + +KAS Sbjct: 345 IVIRNKPLKASI 356 >gi|87123046|ref|ZP_01078897.1| hypothetical protein RS9917_04285 [Synechococcus sp. RS9917] gi|86168766|gb|EAQ70022.1| hypothetical protein RS9917_04285 [Synechococcus sp. RS9917] Length = 278 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 104/269 (38%), Gaps = 20/269 (7%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G A FL +AD+ S LT G++ LL + D +L Sbjct: 10 LLRLQGVGARDFLHGQTSADLQQAADHALIRSCWLTATGRVQALLEVRLDDEGADVLVLS 69 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + + S D+++F R + + P+ + + + D+ D L Sbjct: 70 GEAAALASGFDRVIFPADR----VRLLPLAQQRRLQRLQAPGVHRPWSDDVLWCDDSCLP 125 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 W + ++ R+ G+ + P + + +SL+KGCY+GQ Sbjct: 126 AAWEALPR--AEASALEAWRLRVGLPRHPAEL-NGDTNPLELGLGDW--LSLSKGCYLGQ 180 Query: 189 EVVSRIQHRNIIRKRP----MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALA 240 E ++++ R+ ++++ ++ T G+P+ + G + + G + LA Sbjct: 181 ETIAKLTARDGVKQKLRHWQLVEAPTGLTIEPGTPLNLSNERAGLITSALPTPGGWQGLA 240 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFP 269 + R A + + L G+ ++ S P Sbjct: 241 LVR-RAALEAPQLQLQLGDEGLTLQISPP 268 >gi|238061305|ref|ZP_04606014.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149] gi|237883116|gb|EEP71944.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149] Length = 370 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 62/296 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + V G+ I +L + T + L +L+P G + + ++++ + DT Sbjct: 57 SHRGIVAVPGEERIGWLHTLTTQHLAALTAGEGTELLVLSPHGHVEQHAMVAE-DGDTTW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------NQEHTFSN 112 L+ + L+ L + S V +LS Sbjct: 116 LDTEPGATGGLLTYLEKMRFFSKVEPRDATAEHALLSLVGPEATGALTTLGVTGLAAPDA 175 Query: 113 SSFIDERFSIADVLLHRT------------WGHNEKIASDI------------------- 141 + +F ++ T W + D+ Sbjct: 176 VAVPGPKFRAGELPPRPTVRYAVAPLPGGGWARRGPLGVDLLVPRPAMDRVVAELRGAGV 235 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y +R+ D P + + + + L KGCY GQE V+R+ + Sbjct: 236 PAVGLWAYEAIRVAARRARVGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 +R +++ D P +G+P+ D +G +G V G+ ALA+ + Sbjct: 294 MGRPPRRLVLLHLDGVTSDQPPAAGTPVTLDGRAVGFVGTAVLHHELGQIALAVVK 349 >gi|310643481|ref|YP_003948239.1| glycine cleavage system aminomethyltransferase t [Paenibacillus polymyxa SC2] gi|309248431|gb|ADO57998.1| glycine cleavage system aminomethyltransferase T [Paenibacillus polymyxa SC2] Length = 366 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 107/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A FLQ + T DV L A+ S + P G ++ L+ + ++ Sbjct: 53 SHMGEFLVEGKEAEAFLQRVTTNDVSQLEPGQAQYSLLCYPDGGVVDDLLVYCKGPERYM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 L ++ S D D L+ + + ++V ++ +L+ ++ + Sbjct: 113 LVVNASNIDKDWDWLIRH-VPASVHLKNVSDAIALLALQGPEAARIAAAVTDTDITNLAS 171 Query: 117 --------------------------------DERFSIADVLLHRTWGHNEKIASDIKTY 144 E L R I + + Sbjct: 172 FRFHENVQLFGAKALVSRTGYTGEDGFEFYIPAEEAPAVWDGLLRCGESYGLIPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + +TI P +A + + L KG +IG+E + R + + I RK Sbjct: 232 DTLRFEARLPLYGQEL-SATISPLEAGLGFF--VKLNKGDFIGREALQRQKEQGIPRKLI 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 + +P + P+ + IG + K+ L +A +D + + + + Sbjct: 289 GLEMIDRGIPRAHYPVFAEGQHIGEVTTGTQSPTLKRNLGLALVDSRFSTLSTPLEVEIR 348 Query: 261 GVRVKASF 268 G R++A Sbjct: 349 GKRLRAEV 356 >gi|258511767|ref|YP_003185201.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478493|gb|ACV58812.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 367 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 101/297 (34%), Gaps = 47/297 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G + FLQ ++T D+ L A + + +G L L+ ++ +D F Sbjct: 50 SHMGEIEVSGPDSFSFLQHLLTNDLARLRPGRALYTLMTDDRGGTLDDLLVYQLGDDRFW 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------S 113 L ++ + R++ + L + + V + + + +L+ Sbjct: 110 LVVNAANREADVAWLRDHIEGAGVTVTDRSDDVALLAVQGPRAADRLEQLGLLVGSLRPF 169 Query: 114 SFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRIN 150 SF RF ++++ RT E + LR+ Sbjct: 170 SFTSARFQEGEIMVSRTGYTGEDGFELYTDGETARKLFEALQALGVTPCGLGARDTLRLE 229 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + + P +A + + KG +IG+E + R+ + Sbjct: 230 ACLPLYGQELRRD-VTPLEASLAPF--VKFDKGDFIGREALLSQAEAGPSRRLVGVEMAD 286 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261 +P +G + + +G + LA+ + A+ + + + + G Sbjct: 287 RAIPRTGYAVFRGEQRVGEITSGTLSPTLERPIGLALV--NASAAAVGETLEVEIRG 341 >gi|256751104|ref|ZP_05491986.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus CCSD1] gi|256750010|gb|EEU63032.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus CCSD1] Length = 368 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 57/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+ Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFL 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + ++ KL F Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAVQGPKAEEILQKLTYTDLSEIKF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142 + + NV I I +V +I +++I + + + Sbjct: 172 FYFKDNVKI--AGIECLVSRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G + D+ +IG + LA+ ID + + Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344 Query: 257 LTVHGVRVKA 266 + + +KA Sbjct: 345 IVIRNKPLKA 354 >gi|116071548|ref|ZP_01468816.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107] gi|116065171|gb|EAU70929.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107] Length = 265 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 99/253 (39%), Gaps = 25/253 (9%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G+ FLQ +AD+ P + L+ G++ LL + D +L Sbjct: 13 LLRLEGEGTRNFLQGQTSADMTDTPEGALVQTCWLSATGRLRALLEVRLRANGADVLVLA 72 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + D+++F R + +QPI Q S I + D L Sbjct: 73 GDATAVAKGFDQVIFPADR----VRLQPITE------QRRVQPLSKTITALWLDHDSPLP 122 Query: 129 RTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 +W N + ++ + E R+ G + N D P + + L +SL+KGC++G Sbjct: 123 PSWTSNPADSKQLERWRIEQRLAFGAGELNAD-----ANPFELGLTDL--VSLSKGCFLG 175 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243 QE V+++ + ++ + +P G + + GT+ V+ G LA+ R Sbjct: 176 QETVAKLANLGGTKQEL-RGWICNHVPSVGDTLRANGERAGTITSVLDTPEGSIGLALVR 234 Query: 244 IDKVDHAIKKGMA 256 + G Sbjct: 235 RLHLGAETLDGSD 247 >gi|55379206|ref|YP_137056.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049] gi|55231931|gb|AAV47350.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049] Length = 361 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 101/305 (33%), Gaps = 59/305 (19%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I V G+ + ++ ++ V + +L P G++ + E ++ Sbjct: 48 YGVIVVTGEDRVDYVDNAVSNRVPD-EDGAGCYALLLDPDGRVDTDMYVYNAGE-RLLVF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTF------------SNSSF 115 K + L + K V E + V + + Sbjct: 106 TPPQKAEELAAEWA-DKTFIQDVEFEEATDDFAVFGVHGPKATEKIASVLHQTGTPPAPL 164 Query: 116 IDER--FSIADVLLHRTWGHNEKIASDI--------------------------KTYHEL 147 ER A V + RT + + D+ +T+ L Sbjct: 165 TFERGELGDAGVSVIRTDDLAGEESYDVVCSADDAETVFDTLVNRGLNAVPFGYQTWETL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + G +T+ P+D + N + KGCY+GQEVVSRI++R +R + + Sbjct: 225 TLEAGTPLFDTEI--EGALPNDLGL--RNALDFEKGCYVGQEVVSRIENRGHPTQRLVGL 280 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261 + P G+ + D +G + ALA ++ + A+K + + G Sbjct: 281 -AVEACPDPGAAVFAGDEHVGDVTRAAQSPMREAPIALANLSWERPEEALK----IRIDG 335 Query: 262 VRVKA 266 V A Sbjct: 336 EPVSA 340 >gi|320449502|ref|YP_004201598.1| aminomethyltransfersae [Thermus scotoductus SA-01] gi|320149671|gb|ADW21049.1| aminomethyltransfersae [Thermus scotoductus SA-01] Length = 259 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 93/266 (34%), Gaps = 36/266 (13%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + V G A+ FLQ T D+ L G+ L +G+I + + E+ F+L Sbjct: 19 GLLLVRGPDALSFLQGQATRDLRRLSGP--VGALFLNHRGQIEEAATVF-VHEEGFLL-A 74 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + L +L Y + V + P+ + + +E + A V Sbjct: 75 PWGTLEGLRARLKRYIVFDQVELLELPLYRRLHADGREEVAESGEGAHP----AGVYPLY 130 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 T + SDI+ P + L+ + KGCY+GQE Sbjct: 131 TLLKGLPLLSDIR---------------------GELPQSVGL--LHLVDYGKGCYVGQE 167 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARID 245 +++R++ + + + + G + +L + ++G V G LA+ R + Sbjct: 168 IMARLEGK-EVHHHLVGLRGLSPAQEAPFDLLLEGRKVGEAKRVMETPFGVFGLAVMRKE 226 Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271 A+ +G + W Sbjct: 227 VPLGAVVEGGGGRFRVEPLPFEEAAW 252 >gi|168703292|ref|ZP_02735569.1| glycine cleavage system T protein [Gemmata obscuriglobus UQM 2246] Length = 340 Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 83/274 (30%), Gaps = 48/274 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFIL 67 + + G A FL + T D LP + P+ K+ I I + Sbjct: 31 LVLTGPDAPMFLGNLSTNDTKELPLGGGCEAYFCDPRAKVKFQTWIYHIRLSDGRHAMWV 90 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNSSFIDE------- 118 E + L+ L Y + V I + + L+ ++ + Sbjct: 91 ETTAGRNTELVQYLDRYLISEQVEIADRTADFAQLHLAGPGAAAVLGTALGEPVPDLPPF 150 Query: 119 ------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR 148 R +AD + R + + + LR Sbjct: 151 AHMERTFGGTATCSLRRRDQLGVPGFDIVCRTDVADG-VRRLLSAAGAVPAGPDVFETLR 209 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE--VVSRIQHRNIIRKRPMI 206 I G D + F + +S +KGCY+GQE V++R + ++ R + Sbjct: 210 IEAGAPVFGKDIDENR-FVMEVGFAP-RAVSYSKGCYLGQEPIVMARDRAGHVNRAFLGV 267 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 P+G+ + D E+G + L Sbjct: 268 KVLEGGPLPAGTKLFRDGAEVGLVTSSCDSPRLG 301 >gi|218289656|ref|ZP_03493876.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius LAA1] gi|218240306|gb|EED07489.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius LAA1] Length = 350 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 101/297 (34%), Gaps = 47/297 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G + FLQ ++T D+ L A + + +G + L+ ++E+ F Sbjct: 33 SHMGEIEVFGPDSFSFLQRVLTNDLARLRPGRALYTLMTDDRGGTIDDLLVYRLEDSRFW 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------FSNS 113 L ++ + R++ L + +NV + + + +++ Sbjct: 93 LVVNAANRETDAAWLKDHIEAANVTVTDRSDDVALIAVQGPRAVDRLEQLGLSVGSLRPF 152 Query: 114 SFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRIN 150 SF RF ++++ RT E + LR+ Sbjct: 153 SFTSARFQDGEIMISRTGYTGEDGFELYTDGETARALFEALRALGVTPCGLGARDTLRLE 212 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + + P +A + + KG +IG+E + R+ + Sbjct: 213 ACLPLYGQELRRD-VTPLEASLAPF--VKFDKGDFIGREALLSQAEAGPSRRLVGVEMAD 269 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261 +P +G + + +G + LA+ D AI + + + + G Sbjct: 270 RAIPRTGYAVFRGEQRVGEITSGTLSPTLERPIGLALV--DASAAAIGETLEVEIRG 324 >gi|293191194|ref|ZP_06609127.1| folate-binding protein YgfZ [Actinomyces odontolyticus F0309] gi|292820615|gb|EFF79584.1| folate-binding protein YgfZ [Actinomyces odontolyticus F0309] Length = 389 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 52/290 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V + + I V G + ++ ++ + +V L +R IL+P+G++ + + + Sbjct: 39 ALVRRPDLAVISVSGADRLTWVTSLASQNVTDLVPGASRELLILSPEGRVEHWA-GASDD 97 Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR-----SNVII------------EIQPINGVVL 102 +T L ++RS + L + LR +V + + G + Sbjct: 98 GETLHLIVERSDVSEFVAFLESMRFALRVAVSERDVAVFSSIRAGANMPESAADLPGHLW 157 Query: 103 SWNQEHT---------FSNSSFIDERFSIADVLLHRTWGHNEKIA-------------SD 140 +W F R + + R + A + Sbjct: 158 TWEDPWPGVVEGGAAYFQGECHPGARTPMMFHAVSREAADEFEAAWLSACPEAGSRRRAG 217 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + RI + + P + L + + TKGCY GQE ++R+ + Sbjct: 218 YLAWEATRIAAWKPRLGRE-TDARAIPPELDW-LRSAVHTTKGCYRGQETIARVLNLGRP 275 Query: 201 RKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242 +R + DLP G+PI ++G + G ALA+ Sbjct: 276 PRRLTYLQLDGSRGDLPAPGTPIEVGGRQVGVITSSARHADEGPIALALI 325 >gi|167038372|ref|YP_001665950.1| glycine cleavage system aminomethyltransferase T [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116776|ref|YP_004186935.1| glycine cleavage system T protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687722|sp|B0KD95|GCST_THEP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166857206|gb|ABY95614.1| glycine cleavage system T protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929867|gb|ADV80552.1| glycine cleavage system T protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 368 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 57/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+ Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFL 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + ++ KL F Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAVQGPKAEEILQKLTYTDLSEIKF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142 + + NV I I +V ++ ++++ + + + Sbjct: 172 FYFKDNVKI--AGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G + D+ +IG + LA+ ID + + Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344 Query: 257 LTVHGVRVKA 266 + + +KA Sbjct: 345 IVIRNKPLKA 354 >gi|297543822|ref|YP_003676124.1| glycine cleavage system T protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841597|gb|ADH60113.1| glycine cleavage system T protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 368 Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 104/312 (33%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ LI K ++ F+ Sbjct: 52 SHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLIYKYSDEHFL 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + +++KL F Sbjct: 112 LVVNAANIEKDYKWMNDNKGVYAVEINNISDEISELAIQGPKAEEVLEKLTDTDLSQIKF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142 + + NV I IN ++ +I ++++ + + + Sbjct: 172 FYFKDNVKI--AGINSLISRTGYTGEDGFEIYIPNKYAVELWEKIIEVGKEYGLKPAGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G + + +IG + LA+ + + + Sbjct: 287 IVGFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLALIDVKYAK--LGNQIE 344 Query: 257 LTVHGVRVKASF 268 + V +KAS Sbjct: 345 IVVRNKPLKASI 356 >gi|116515194|ref|YP_802823.1| YgfZ [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257048|gb|ABJ90730.1| predicted folate-dependent regulatory protein involved in one-carbon metabolism [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 324 Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 92/267 (34%), Gaps = 40/267 (14%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + L S I+V GK +L T ++ T+ + A GK+L F I K + Sbjct: 20 TFIELDQWSIIRVKGKDKRNYLNNQFTININTINKNKYKIGAHCNINGKVLAIFFIFKYK 79 Query: 62 EDTFIL----EIDRSKRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWN--- 105 + F + D+ + L Y L + + N L N Sbjct: 80 DSFFYIINNSVCDKHLIE-----LKKYSLFYKIKIFKEKKFHLFGLCGSNSYYLLKNFFF 134 Query: 106 ------------QEHTFSNSSFIDERFSIA--DVLLHRTWGHNEK--IASDIKTYHELRI 149 + F ++ +RF I +LH N+K + S+ K + L I Sbjct: 135 IHFKKKNMVTKIKNIIFLKINYPVKRFLILTKGNMLHNFLNDNKKKILFSNNKQWISLDI 194 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + + N IS TKGCY GQE++ + +++ I + + G Sbjct: 195 ESSFP-IVNKTISGRFILQTLDLKKWNAISFTKGCYYGQEMLCKYENKKINKFIICALIG 253 Query: 210 T--DDLPPSGSPILTDDIEIGTLGVVV 234 + +P + + D E + Sbjct: 254 RIGNTIPINNENVKYKDKEGNKYISGI 280 >gi|313127513|ref|YP_004037783.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] gi|312293878|gb|ADQ68338.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] Length = 364 Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 105/307 (34%), Gaps = 59/307 (19%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + V G I F+ ++ V + +L PQG+I + E + Sbjct: 48 YGVVVVEGDDRIEFVDNAVSNRVPD-ADGEGVYALLLDPQGRIETDMYVYNAGE-RLLCF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPIN-GVVLSWNQEHT------FSNSSFIDE-- 118 + + L++ K+ V I + GV + T + ++ + Sbjct: 106 TPPKRAEPLVEDWS-EKVFIQDVSIRDATADFGVFGVHGPQSTEKVASVLNGAAAPEPAL 164 Query: 119 ---RFSIADVLLHRTWGHN------------EKIASDI----------------KTYHEL 147 R S+ + + G A+D+ T+ L Sbjct: 165 SFVRGSMGNAGVTVIAGDGLVGEEGYEVVCTADAAADVFDTLLTNGMNAVPFGYATWDML 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 G +T+ + ++ L N + KGCY+GQEVVS++++R +R + + Sbjct: 225 TAEAGTPLFDTELVGRVPN----VLGLRNALDFEKGCYVGQEVVSKVENRGRPSQRLVGL 280 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261 + LP SG+ + D +G + V ALA+ D+ ++ + V Sbjct: 281 R-PEALPESGAAVFNGDSSVGEVTRAVESPMLESPIALALLDFDEDASTVQ----VRVDE 335 Query: 262 VRVKASF 268 V A Sbjct: 336 KEVTADV 342 >gi|1303890|dbj|BAA12546.1| YqhI [Bacillus subtilis] Length = 362 Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 92/285 (32%), Gaps = 53/285 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + E+ ++ Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + + +V I+ Q +L+ Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 168 Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 +FIDE R + + ++ I + Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + RK Sbjct: 229 DTLRFEANVPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 + +P G + + +G + LA+ Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330 >gi|167038901|ref|YP_001661886.1| glycine cleavage system aminomethyltransferase T [Thermoanaerobacter sp. X514] gi|300913511|ref|ZP_07130828.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561] gi|307266391|ref|ZP_07547928.1| glycine cleavage system T protein [Thermoanaerobacter wiegelii Rt8.B1] gi|307723474|ref|YP_003903225.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513] gi|238687585|sp|B0K242|GCST_THEPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166853141|gb|ABY91550.1| glycine cleavage system T protein [Thermoanaerobacter sp. X514] gi|300890196|gb|EFK85341.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561] gi|306918564|gb|EFN48801.1| glycine cleavage system T protein [Thermoanaerobacter wiegelii Rt8.B1] gi|307580535|gb|ADN53934.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513] Length = 368 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 97/308 (31%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFY 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L ++ + + + K V IE I + + D S Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEIENISDEVAELAIQGPKAEEILQKLTDTDLSEIKF 171 Query: 123 -----------ADVLLHRTWGHNEKIAS-------DIKTY-------------------- 144 + L+ RT E ++ + Sbjct: 172 FCFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 232 DTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRKIV 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + +P G + + +IG + LA+ ID + + + Sbjct: 289 GFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIEIV 346 Query: 259 VHGVRVKA 266 + +KA Sbjct: 347 IRNKPLKA 354 >gi|154508513|ref|ZP_02044155.1| hypothetical protein ACTODO_01014 [Actinomyces odontolyticus ATCC 17982] gi|153798147|gb|EDN80567.1| hypothetical protein ACTODO_01014 [Actinomyces odontolyticus ATCC 17982] Length = 389 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 52/290 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V + + I V G + ++ ++ + V L ++R IL+P+G++ + + + Sbjct: 39 ALVRRPDLAVISVSGADRLMWVTSLASQIVTDLVPGVSRELLILSPEGRVEHWA-GASDD 97 Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR-----SNVII------------EIQPINGVVL 102 +T L ++RS + L + LR S+V++ + + G V Sbjct: 98 GETLHLIVERSDVSEFVAFLESMRFALRVAVSESDVVVFSSVRAGANTPESVADLPGHVW 157 Query: 103 SWNQEHTF----SNSSFIDERFSIA--DVLLHRTWGHNEKIASDIK-------------- 142 +W + F ER A ++ H Sbjct: 158 TWEDPWPGVVEGGAAYFQGERHPGARTPMMFHAVSREAADEFEAAWLSACPEDGSRRRAG 217 Query: 143 --TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + +R+ + + P + L + + TKGCY GQE ++R+ + Sbjct: 218 YLAWEAMRVAAWKPRLGRE-TDARAIPPEVDW-LRSAVHTTKGCYRGQETIARVLNLGRP 275 Query: 201 RKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242 +R + DLP G+PI ++G + G ALA+ Sbjct: 276 PRRLTYLQLDGSRGDLPAPGTPIEVGGRQVGVITSSARHADEGPVALALI 325 >gi|308174251|ref|YP_003920956.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens DSM 7] gi|307607115|emb|CBI43486.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens DSM 7] gi|328554197|gb|AEB24689.1| glycine cleavage system aminomethyltransferase T [Bacillus amyloliquefaciens TA208] gi|328912590|gb|AEB64186.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus amyloliquefaciens LL3] Length = 366 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 111/316 (35%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G+ A+ FLQ ++T DV L K A +A+ P G + LI + E ++ Sbjct: 50 SHMGEVEVSGQDALSFLQKMMTNDVADLKPKSALYTAMCYPDGGTVDDLLIYQKSETCYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112 L I+ S + + L + + +V + Q +L+ + Sbjct: 110 LVINASNIEKDLAWLKEHA-KGDVTLTNQSDEISLLAVQGPNAQTVLSKLTECDLASLKP 168 Query: 113 SSFIDERF-SIADVLLHRT--------------------------WGHNEK-IASDIKTY 144 +FIDE + VLL RT G NE + + Sbjct: 169 FTFIDEADVAGRQVLLSRTGYTGEDGFELYCRNGDAVHLFKEILAAGENEGLVPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + + RK Sbjct: 229 DTLRFEAKLALYGQELTKD-ITPIEAGIGF--AVKHKKDSDFFGKSVLSEQKEKGAPRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 + +P G + D + IG + LA+ + + + + + + Sbjct: 286 VGLEMIEKGIPRHGYAVKKDGVAIGEVTTGTQSPTLKKNIGLALIKTEFSEIGTEVEVEI 345 Query: 258 TVHGVRVKASFPHWYK 273 V+ K +YK Sbjct: 346 RKKTVKAKIVRTPFYK 361 >gi|321311941|ref|YP_004204228.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis BSn5] gi|320018215|gb|ADV93201.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis BSn5] Length = 362 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 93/285 (32%), Gaps = 53/285 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ ++ Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + + +V I+ Q +L+ Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADVSALKP 168 Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 +FIDE R + + ++ I + Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + RK Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHNKESDFFGKSVLSEQKENGAKRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 + +P G + + +G + LA+ Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330 >gi|330470354|ref|YP_004408097.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032] gi|328813325|gb|AEB47497.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032] Length = 370 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 101/316 (31%), Gaps = 57/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ I V G I +L + T + L +L+P G I + ++++ + DT Sbjct: 57 SHRGVIAVPGADRISWLHTLTTQHLAELGPWQGTELLVLSPNGHIEQHAMVAE-DGDTTW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 L+ + + L+ L + S V + +LS + +D Sbjct: 116 LDTEPGATEGLLTYLEKMRFFSRVEPRDVTADQALLSLVGPRVAEALALLDVPTLNAPDV 175 Query: 118 -----ERFSIADVLLHRT------------WGHNEKIASDI------------------- 141 +F +V T W + D+ Sbjct: 176 SGVPGPKFRSGEVPPRPTARYDVKPLPSGGWARRGPLGVDLLVPRTAMDQVVTRLRDGGV 235 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 Y +R+ D + + + + L KGCY GQE V+R+ + Sbjct: 236 GVAGLWAYEAVRVAARRARVGVD-TDHRTIAAEVDL-IAPAVHLDKGCYRGQETVARVHN 293 Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252 +R +++ TD LP +G+P+ +G +G V L + + ++ Sbjct: 294 MGRPPRRLVLLHLDGVTTDQLPVAGTPVDLAGRTVGFVGTAVHHHELGQVALAVIKRSVP 353 Query: 253 KGMALTVHGVRVKASF 268 L V Sbjct: 354 DDAVLRVGESAAAIDR 369 >gi|326391263|ref|ZP_08212805.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus JW 200] gi|325992711|gb|EGD51161.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus JW 200] Length = 368 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 101/310 (32%), Gaps = 57/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F Sbjct: 52 SHMGEITVKGREAFKFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFY 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + ++ KL F Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAIQGPKAEEILQKLTDTDLSQIKF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142 + + NV I I +V ++ ++++ + + + Sbjct: 172 FCFKDNVKI--AGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + KG +IG++ + + + + RK Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G + + +IG + LA+ ID + + Sbjct: 287 IVGFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344 Query: 257 LTVHGVRVKA 266 + + +KA Sbjct: 345 IVIRNKPLKA 354 >gi|291484901|dbj|BAI85976.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. natto BEST195] Length = 362 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 93/285 (32%), Gaps = 53/285 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ ++ Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + + +V I+ Q +L+ Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADVSALKP 168 Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 +FIDE R + + ++ I + Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + RK Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 + +P G + + +G + LA+ Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330 >gi|33864136|ref|NP_895696.1| hypothetical protein PMT1869 [Prochlorococcus marinus str. MIT 9313] gi|33635720|emb|CAE22044.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 283 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 30/274 (10%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G + FL +AD+L LT G++ LL + + D +L Sbjct: 15 LLRLEGSGSRDFLHGQTSADLLAAETGSLLRCCWLTATGRVRALLEIRLDERGADVLVLA 74 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + + ++++F V ++ + Q + + + D L Sbjct: 75 GDHNAVATGFEQVIFPA--DQVRLKPSKPIRRLQILAQ---LKQEQTPEVTWLLPDEPLP 129 Query: 129 RTWGHNEKIASD-IKTYHELRINHGIV-DPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + W ++ ++D I+++ R+ G+ +P + P + + +SL+KGCY+ Sbjct: 130 KQWAAMQQASADQIESW---RLKQGLPLEPGE--INGDTNPFELGLTAW--VSLSKGCYL 182 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-----DIEIGTLGVV------VG 235 GQE ++++ + I+++ + I + + G + V G Sbjct: 183 GQETLAKLANSGGIKQQLRYWQANRPIAVGQKLINLEPEAGVNNRAGVITSVMQDQASTG 242 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ R + A + L RV+ S P Sbjct: 243 SHGLALVRRKSLTEA---ELCLAEDSTRVRLSIP 273 >gi|86739182|ref|YP_479582.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. CcI3] gi|86566044|gb|ABD09853.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. CcI3] Length = 385 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 99/295 (33%), Gaps = 65/295 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ ++V G + +L +I + + L + +L+P G + + L+ + + Sbjct: 55 SHRDVLRVSGPDRLSWLHSITSQHLSALGALRGTEALVLSPHGHVEHH-LVLADDGTSTW 113 Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWN------------------- 105 ++++ L+ L + LR +E + V + Sbjct: 114 VDVEPGTGGILLRYLESMRFMLR----VEPADLGAVTAVLSVLGPRAAQVAAAALGGPGD 169 Query: 106 ---------QEHTFSNSSFIDERFSIA---------------DVLLHRT--------WGH 133 + + I + + D+L+ R Sbjct: 170 GAPGPGLPEPQAPGPVGAPITGPYPVGRTGTGTLVRRMPHGVDLLVGRADLTGTVERLRA 229 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + + + +RI + + PH+ L + + L KGCY GQE V+R Sbjct: 230 AGAGLAGLSAFDAMRIASRRPRLSRE-TDHRTIPHEVGW-LASAVHLDKGCYRGQETVAR 287 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243 + + +R +++ + S + E+G +G +G ALA+ + Sbjct: 288 VHNLGRPPRRLVLLHLDGTVAAPRSTVTVGGREVGFVGSSEVHEELGPIALAVIK 342 >gi|124024186|ref|YP_001018493.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus str. MIT 9303] gi|123964472|gb|ABM79228.1| Predicted aminomethyltransferase GcvT-like protein [Prochlorococcus marinus str. MIT 9303] Length = 283 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 30/274 (10%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68 +++ G + FL +AD+L LT G++ LL + + D +L Sbjct: 15 LLRLEGAGSRDFLHGQTSADLLAAETGSLLRCCWLTATGRVRALLEIRLDERGADVLVLA 74 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + + ++++F V ++ + Q + + + D L Sbjct: 75 GDHNAVATGFEQVIFPA--DQVRLKPSKPIRRLQILAQ---LKQEQTPEVTWLLPDEPLP 129 Query: 129 RTWGHNEKIASD-IKTYHELRINHGIV-DPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + W ++ ++D I+++ R+ G+ +P + P + + +SL+KGCY+ Sbjct: 130 KQWAAMQQASADQIESW---RLKQGLPLEPGE--INGDTNPFELGLTAW--VSLSKGCYL 182 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-----DIEIGTLGVV------VG 235 GQE ++++ + I+++ + I + + G + V G Sbjct: 183 GQETLAKLANSGGIKQQLRYWQANRPIAVGQKLINLEPEAGVNNRAGVITSVMQDQASTG 242 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ R + A + L RV+ S P Sbjct: 243 SYGLALVRRKALTEA---ELCLAEDSTRVRLSIP 273 >gi|268317357|ref|YP_003291076.1| glycine cleavage system T protein [Rhodothermus marinus DSM 4252] gi|262334891|gb|ACY48688.1| glycine cleavage system T protein [Rhodothermus marinus DSM 4252] Length = 375 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 107/323 (33%), Gaps = 67/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A F+Q +IT D L A + + TP+G ++ L+ + + +T++ Sbjct: 54 SHMGEIFVRGPRAFDFVQHLITNDAARLYDGRALYTVMCTPEGGVVDDLLVYRFDAETYL 113 Query: 67 LEIDRSKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110 L ++ + + + +E + +L+ F Sbjct: 114 LVVNAANIEKDFAWMQANNPM-----GAHLENRSDEIALLALQGPAAFEIARHFVPDLAP 168 Query: 111 -----------SNSSFIDERFSIADVLLH----------------RTWGHNEKI------ 137 +F+D R+++ + R W ++ Sbjct: 169 NNPRYYHFRVMEPGTFLDCRWAVLSHTGYTGEPGLEIYCHADEAVRVWDALLEVGQAHGL 228 Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + + LR+ G + + P +A + + + KG +IG+E + R++ Sbjct: 229 KPAGLGARDTLRLEAGYCLYGHEL-DESTNPLEAGLSWV--VKFDKGDFIGREALLRVRE 285 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIA--RIDKV 247 R+ +I +P +G PI IG + AL R D Sbjct: 286 NGPARRLIGLILEERGIPRAGYPITDEGGTSIGKVTSGTLSPVLQQGIALGYVPNRPDYT 345 Query: 248 DHAIKKGMALTVHGVRVKASFPH 270 + + G+ + + + P Sbjct: 346 EPGRRLGVQIRSQILPARVHKPP 368 >gi|88808046|ref|ZP_01123557.1| hypothetical protein WH7805_07786 [Synechococcus sp. WH 7805] gi|88788085|gb|EAR19241.1| hypothetical protein WH7805_07786 [Synechococcus sp. WH 7805] Length = 290 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 89/272 (32%), Gaps = 21/272 (7%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTF 65 + I++ G + FL +A V + L G++ LL + D Sbjct: 16 HFDVIRLEGSGSAGFLHGQTSARVDGAALGQLLQACWLNATGRVQALLELRLDDQGADVL 75 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 +L + +D+++F R V + + + + + + A V Sbjct: 76 VLNGNSDHLAKGLDRVIFPADR--VRLGPARQQRRLQHLSSDQAPGPETVL--WLDDAAV 131 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185 A+D++ + R+ G + P + + ++L KGCY Sbjct: 132 PPPPWDRTQACAAADLERW---RLRQGWPLGAEEI-NGDTNPFELGLAGW--VNLEKGCY 185 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVGKK----- 237 +GQE ++++ R ++++ D + G + + G + V Sbjct: 186 LGQETLAKLGSRGAVKQQLRSWQCADPVAAELKPGDGLTLNGERAGRITSVAHPNACEPQ 245 Query: 238 -ALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 LA+ R ++ + + + Sbjct: 246 CGLALIRRQALEAEELQSETTESRPHPLTLTL 277 >gi|169829067|ref|YP_001699225.1| aminomethyltransferase [Lysinibacillus sphaericus C3-41] gi|254797877|sp|B1HSN7|GCST_LYSSC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|168993555|gb|ACA41095.1| Aminomethyltransferase [Lysinibacillus sphaericus C3-41] Length = 367 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 103/308 (33%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ +D ++ Sbjct: 53 SHMGEILVTGPDALNFLQNLLSNDVSKIATGQAQYTAMCYENGGVVDDLLTYKLADDHYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-------------------------V 101 L ++ + + D +L + + +V I+ Q Sbjct: 113 LCVNAANIEKDYDWMLENQHQYDVTIDNQSDAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144 + + + + R +G E I + + Sbjct: 173 FRFQENVEVTGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILDAGQDKGVVPAGLGCR 232 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G+ + +TI P +A + + L K +IG + + + + RK Sbjct: 233 DTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEDFIGHDALVAQKENGLPRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 I +P G + D EIG + A+ ID I M + Sbjct: 290 GIEMIDKGIPRHGYKVFKDGKEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGNEMEIE 347 Query: 259 VHGVRVKA 266 + G ++K Sbjct: 348 IRGKQLKV 355 >gi|221310380|ref|ZP_03592227.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. subtilis str. 168] gi|221314704|ref|ZP_03596509.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319627|ref|ZP_03600921.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. subtilis str. JH642] gi|221323903|ref|ZP_03605197.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. subtilis str. SMY] gi|255767552|ref|NP_390337.2| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. subtilis str. 168] gi|251757269|sp|P54378|GCST_BACSU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|225185180|emb|CAB14388.2| aminomethyltransferase (glycine cleavage system protein T) [Bacillus subtilis subsp. subtilis str. 168] Length = 362 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 92/285 (32%), Gaps = 53/285 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + E+ ++ Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + + +V I+ Q +L+ Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 168 Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 +FIDE R + + ++ I + Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + RK Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 + +P G + + +G + LA+ Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330 >gi|255717402|ref|XP_002554982.1| KLTH0F18326p [Lachancea thermotolerans] gi|238936365|emb|CAR24545.1| KLTH0F18326p [Lachancea thermotolerans] Length = 480 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 118/443 (26%), Gaps = 174/443 (39%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITA------------------------------DV 31 L N+S + V G ++ FL ++T+ D+ Sbjct: 31 QYCELPNKSHVHVRGPDSVKFLNGLVTSKLLPTYVKKKLTTISVEEEDGIESENVEQFDM 90 Query: 32 LTLP--------------YKIARGSAILTPQGKILLYFLISKIEE----------DTFIL 67 + + +L +G++L +I + F++ Sbjct: 91 TKGNWGLFNEAGEFGPFLSRFGTYTGLLNSKGRLLTDAIIYPVPLLIDSGPARKYPEFLV 150 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSSFIDERFSI 122 E+DRS D + + L S V + P V + + Q + +I+ + Sbjct: 151 EVDRSISDKIEKIFDSHTLVSKVKSHLVPDQKLRTWHVSIGFPQMAGLEENPWINNLMTP 210 Query: 123 ADVLLHR---------------------------TWGHNEKIASDIKTYHELRI------ 149 + L R +N + +D RI Sbjct: 211 LEALKTRESSLSFAQHLLATFFAGAEDKIVAAFIDARYNSTLFNDPHAPQVFRIITRAET 270 Query: 150 --------NHGIVDPNTDFLPSTIFPH--------------------------DALMDLL 175 G DF + PH + D L Sbjct: 271 TDLSKSFNPQGFP---FDFAIEAVTPHHARCQRFESGLIDGLEDFRPETLLPLELNFDFL 327 Query: 176 -NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------------------------ 210 N +S KGCY+GQE+ +R I+RKR + + Sbjct: 328 PNAVSFDKGCYVGQELTARTFSTGILRKRAVPVKIENSHFLQGAGFEKYPAILVEKESNG 387 Query: 211 ---DDLPPSGSPILTD--------DIEIGTLGVVVGKKALAIARIDKVDHAIKK------ 253 + P SP + G+L G + +AI R + A Sbjct: 388 DQVEPSPQPLSPFSSSVIPRKQRRQRPAGSLLCFEGDRGIAILRSEYFQSAFTDAVDRPT 447 Query: 254 ---GMALTVHGVRVKASFPHWYK 273 + T V + P WY+ Sbjct: 448 FRVELPDTDARVTIVPQVPQWYE 470 >gi|289581173|ref|YP_003479639.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099] gi|289530726|gb|ADD05077.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099] Length = 384 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 107/326 (32%), Gaps = 74/326 (22%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I V G+ ++ +++ V + +L PQG+I + I E +L Sbjct: 48 YGVITVTGEDRRDYVDNVVSNHVPE-TDGQGCYALVLGPQGRIEVELYIYNAGE-RILLF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT-------FSNSSFIDERF 120 + L K+ V I++ + + + ++ DER+ Sbjct: 106 TPPGEAKELAADWS-EKVFIQDVEIDVATDEFAIFGIHGPQATEKVASVLNGAASPDERY 164 Query: 121 SI-------ADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIF 166 S A V + RT + D++ +++ +N G+ + Sbjct: 165 SFVRGTMGDAGVSVIRTDALTGEETYEVICGIDDVEAVYDVLLNQGLNAAPFGYRTRDSL 224 Query: 167 PHDAL---------------MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 ++ + L + KGCY+GQEVVSR+++R +R + +T Sbjct: 225 ALESGSALFETELEGTVPNVLGLTTALDFEKGCYVGQEVVSRVENRGQPSRRLIGLTIEV 284 Query: 212 D----------------------LPPSGSPILTDDIEIGTLGVVVG-------KKALAIA 242 D +P G+ + D +G + G ALA+ Sbjct: 285 DAASEPEAEAEPESHTDADAAELVPNPGAAVFDGDASVGEI-SRAGLSPLLETPIALALL 343 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASF 268 D + + V G V A+ Sbjct: 344 EYDHEGESFT----VRVGGEEVPATR 365 >gi|296333386|ref|ZP_06875839.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675108|ref|YP_003866780.1| glycine cleavage system protein T [Bacillus subtilis subsp. spizizenii str. W23] gi|296149584|gb|EFG90480.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413352|gb|ADM38471.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus subtilis subsp. spizizenii str. W23] Length = 362 Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 98/303 (32%), Gaps = 57/303 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G ++PFLQ ++T DV +L A+ +A+ P G + L+ + E+ ++ Sbjct: 50 SHMGEIEVSGNDSLPFLQRLMTNDVSSLSAGRAQYTAMCYPDGGTVDDLLVYQKGENRYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + + +V I+ +L+ Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNLSDQIALLAVQGPKAETILKNLTASDMSALKP 168 Query: 113 SSFIDE-RFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 FID+ S L+ RT E I + Sbjct: 169 FGFIDDADISGCKALISRTGYTGEDGFEIYCRTDDAVHIWKQIIDAGEVYGLIPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+S + RK Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 + +P G + + +G + LA+ A + G + Sbjct: 286 VGLEMTEKGIPRHGYEVFHNGKSVGKVTTGTQSPTLGKNVGLALI----AAEASEIGTVV 341 Query: 258 TVH 260 V Sbjct: 342 EVE 344 >gi|222478769|ref|YP_002565006.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239] gi|222451671|gb|ACM55936.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239] Length = 386 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 104/328 (31%), Gaps = 77/328 (23%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + + G+ + F+ ++ + + +L PQG I + +E ++ Sbjct: 48 YGVLAITGEDRVEFIDNAVSNRIPE-ADGQGVYALLLDPQGGIETDMYVYNADE-RLLVF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VII-EIQPINGVVLSWNQEHTFSNSSFID--------- 117 + + +++ + K+ V I +I GV + T +S + Sbjct: 106 LPPERTEAVAEDWA-SKVFIQDVTIDDISDELGVFGVHGPKSTEKVASVLGGPGAPEKPL 164 Query: 118 --ERFSIADVLLHRTWGHNEK---------IASDIK-------------------TYHEL 147 R S+ D + A D + T+ L Sbjct: 165 SFVRGSMVDAGVTVIASDAPLGEEGYEVVCAAEDAEEVLDTLLNRGLNAAPFGYRTWDAL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + G ++ P ++ L N + KGCY+GQEVVSR++++ +R + + Sbjct: 225 SLEAGTP--LFEYELEGTVP--NVLGLRNALDFEKGCYVGQEVVSRVENQGRPSRRLIGL 280 Query: 208 TGTD-------------------DLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 LP G+ + D +G + ALA A Sbjct: 281 DLDGLADATADIDGDADPEGYDEILPSPGAAVFDGDEAVGEVTRAAVGPAAGDPIALAFA 340 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPH 270 R D A + V G V A+ Sbjct: 341 RFD----ADLVDPTVRVDGEEVAATRSD 364 >gi|15615379|ref|NP_243682.1| glycine cleavage system aminomethyltransferase T [Bacillus halodurans C-125] gi|11132403|sp|Q9K934|GCST_BACHD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|10175437|dbj|BAB06535.1| aminomethyltransferase [Bacillus halodurans C-125] Length = 365 Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 52/290 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A+ +LQ ++T DV + A+ +A+ G + LI + ED ++ Sbjct: 52 SHMGEVEVTGAQALNYLQRLVTNDVSKIKDGQAQYTAMCYENGGTVDDLLIYRRSEDQYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFSNSSFIDERF 120 L I+ + D I + + + V I L+ T + D +F Sbjct: 112 LVINAANIDKDIAWMEKHAI-DGVSITNVSNQTAQLALQGPVAENVLQTLTEEPLADIKF 170 Query: 121 ---------SIADVLLHRTWGHNEK------IASDIK-TY-------------------- 144 + +VLL RT E +A D + Sbjct: 171 FRFVDGVNIAGVNVLLSRTGYTGEDGFELYCLAEDAPVLWKKLIEAGKEHGVVPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P +A + + + K +IG+E++ + + + RK Sbjct: 231 DTLRFEAKLPLYGQELTKD-ISPIEAGIGF--AVKVDKEDFIGKEILKKQKEQGAPRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248 + +P +G + D+ +IG + LA+ + + + Sbjct: 288 GLEMVDKGIPRTGYEVYVDNQKIGFVTTGTQSPTLKKNVGLALLQAEHSE 337 >gi|254446453|ref|ZP_05059929.1| Glycine cleavage T-protein C-terminal barrel domain [Verrucomicrobiae bacterium DG1235] gi|198260761|gb|EDY85069.1| Glycine cleavage T-protein C-terminal barrel domain [Verrucomicrobiae bacterium DG1235] Length = 278 Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 54/267 (20%) Query: 37 KIARGSAILTPQGKILLYFLISKIEEDTFIL---EI-DRSKRDSLIDKLLFYKL------ 86 L +GK+L + + + +++ + +++ + L L+ ++ Sbjct: 4 GDVVYGLWLDRKGKVLADSFVLRRGPEDYLVVSVDCGEKTIFERLDAYLIMEEVELSGSS 63 Query: 87 ---RS--------------NVIIEI------QPINGVVLSWNQEHTFSNSSFID------ 117 R+ V IE+ NG++ W + + F+ Sbjct: 64 DGARAICILGESPQVAACEKVGIEMPLADRFTESNGLIAFWGKRGSEGALEFLALTEEGR 123 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 +R I D L R G E D + L I + + F S P + ++ + Sbjct: 124 DRIEIVDAGL-RDIGSEEL---DREAMSFLAIEAKVPEIGLGFGDSD-LPQELGLER-DA 177 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPPSGSPI---LTDDIEIGTLG- 231 +S KGCY+GQEV++R+ +RKR + I+ G + + P PI G L Sbjct: 178 VSFNKGCYLGQEVMARLHAMGRVRKRLVRISIEGPNTIAPGDLPIDLLDAAGKRQGQLRA 237 Query: 232 ---VVVGKKALAIARIDKVDHAIKKGM 255 G L I +++ G Sbjct: 238 MAYSKSGGMGLGIVSSGFSGDSLQAGT 264 >gi|167815348|ref|ZP_02447028.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 91] Length = 178 Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 6/145 (4%) Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 + +I R D L ++++ + + L + G + Sbjct: 2 PDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDW--LDVRAGEPRITQPAV-EQ 57 Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILT 222 P D++ G++ KGCY GQEVV+R Q+R I++R + D +G + Sbjct: 58 FVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGTDAAHAGVELYH 117 Query: 223 DDIEIGTLGVVVGKKALAIARIDKV 247 D G++V A +D + Sbjct: 118 SDDPGQPCGMIVNAAAAPEGGVDAL 142 >gi|126653952|ref|ZP_01725791.1| aminomethyltransferase [Bacillus sp. B14905] gi|126589555|gb|EAZ83696.1| aminomethyltransferase [Bacillus sp. B14905] Length = 367 Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 53/309 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ +D ++ Sbjct: 53 SHMGEILVTGPDALDFLQNLLSNDVSKIATGQAQYTAMCYEDGGVVDDLLTYKLADDHYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-------------------------V 101 L ++ + + D +L + + +V I+ Q Sbjct: 113 LCVNAANIEKDYDWMLENQHQYDVTIDNQSEAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144 + + + + R +G E I + + Sbjct: 173 FRFQENVEVAGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILDAGQDKGVVPAGLGCR 232 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G+ + +TI P +A + + L K +IG + + + + RK Sbjct: 233 DTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEDFIGHDALVAQKENGLPRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 I +P G + D EIG + A+ ID I + + Sbjct: 290 GIEMIDKGIPRHGYKVFKDGQEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGNELEIE 347 Query: 259 VHGVRVKAS 267 + G ++K Sbjct: 348 IRGKQLKVI 356 >gi|88801262|ref|ZP_01116796.1| hypothetical protein MED297_00205 [Reinekea sp. MED297] gi|88775999|gb|EAR07240.1| hypothetical protein MED297_00205 [Reinekea sp. MED297] Length = 254 Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 35/218 (16%) Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 I I+ L+ ++ + I +L Y + S I LS Q + ++ F Sbjct: 6 RIFHIDNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVIFGLSGEQAQSAIDNYF 64 Query: 116 I---DERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV 154 D R + + H E +A +D ++ I + Sbjct: 65 TGSDDVRHNDTATAVKVDNLRWFIITPMEHAEAVAQHFAANATLTDTALWNLYDIKAVLP 124 Query: 155 --DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G Sbjct: 125 RVEAATEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGEST 181 Query: 213 L-PPSGSP----ILTDDIEIGTLGVVV---GKKALAIA 242 P +G + + + GT+ ++ALA+ Sbjct: 182 QCPQAGDALERSVGENWRKGGTVITGYQFNDQQALALV 219 >gi|78042904|ref|YP_359347.1| glycine cleavage system T protein [Carboxydothermus hydrogenoformans Z-2901] gi|123576895|sp|Q3AET7|GCST_CARHZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|77995019|gb|ABB13918.1| glycine cleavage system T protein [Carboxydothermus hydrogenoformans Z-2901] Length = 360 Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 48/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+ +IT DV L + + P G + L K + ++ Sbjct: 52 SHMGEIEITGKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 L ++ + +D + +L Y+ +V + ++ Sbjct: 112 LVVNAANKDKDLAHILQYR-WDDVTVTDLSDETAEIALQGPRAQEILQKLTAFDLNQIKY 170 Query: 113 SSFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 F + + L+ RT E + + LR Sbjct: 171 FGFAEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELLNLGVKPAGLGARDTLRF 230 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + + + I P +A + + K +IG+E + ++ + RK + Sbjct: 231 EACLPLYGHEL-SAEITPLEAGLGW--AVKFNKEDFIGKEALLAQKNAGLKRKIVGLEMI 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G I+ + +G + A+A+ ++ + + + + GVR Sbjct: 288 GAGIPRQGYEIVFNQRGVGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKGVR 347 Query: 264 VKA-SFP 269 + S P Sbjct: 348 ARVISRP 354 >gi|167836301|ref|ZP_02463184.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia thailandensis MSMB43] Length = 160 Score = 91.8 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 12/134 (8%) Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +D R + L R + L + G + P D++ Sbjct: 1 LDARLPALENALPRV---------SAAVWDWLDVRAGEPRITQPAV-EQFVPQMVNFDVI 50 Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 G++ KGCY GQEVV+R Q+R I++R + D +G + D G++ Sbjct: 51 GGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDAARAGVELYHSDDPGQPCGMI 110 Query: 234 VGKKALAIARIDKV 247 V A +D + Sbjct: 111 VNAAAAPEGGVDAL 124 >gi|221632760|ref|YP_002521982.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159] gi|221155637|gb|ACM04764.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159] Length = 375 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 109/311 (35%), Gaps = 53/311 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64 L + + V G A FLQ + DV L A+ S +L P G ++ +I + + + Sbjct: 50 LGHMGQVVVRGSDAQAFLQWLTPNDVAALRPGRAQYSMLLYPHGGVVDDIMIYRRPDREE 109 Query: 65 FILEIDRSKRDSLIDKLLFY---KLRSNVIIE---------------------------- 93 +++ ++ + + + LL + ++ V IE Sbjct: 110 YLVVVNAANTEKDVAWLLEHRAERVEWRVEIEDVSASTGMLALQGPRSEAILQRLTPADL 169 Query: 94 --IQPINGVVLSWNQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASD 140 +Q + +V + T + F + L + + Sbjct: 170 SAVQSFDAIVSTVAGVPTLIARTGYTGEDGFELYFPIDHVGDLWDRLLEAGESDGIVPVG 229 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ + + + I P +A + + + KG +IG+E + R + Sbjct: 230 LGARDTLRLEACLPLYGNEL-SAEITPLEAGLGWV--VKFDKGPFIGREALERQRQEGPP 286 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255 R+ + +P +G + + +G + K + +A +D+ I + + Sbjct: 287 RRLVGFELVERGGIPRTGYEVRQEGERVGYVTSGTNSPTFGKPIGLALVDRRAAGIGREL 346 Query: 256 ALTVHGVRVKA 266 ++ + G V+A Sbjct: 347 SVVIRGRDVRA 357 >gi|254581046|ref|XP_002496508.1| ZYRO0D01738p [Zygosaccharomyces rouxii] gi|238939400|emb|CAR27575.1| ZYRO0D01738p [Zygosaccharomyces rouxii] Length = 451 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 61/171 (35%), Gaps = 39/171 (22%) Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRN 198 D + LR G VD D+ ++ P + D L N +S KGCYIGQE+ +R Sbjct: 273 DPAFFRRLRFEQGYVDSVQDYTAESLLPLELNFDFLPNAVSADKGCYIGQELTARTFATG 332 Query: 199 IIRKRPMIITGTDD------------------------LPPSGSPILTDDI------EIG 228 I+RKR + +T + P + S + G Sbjct: 333 ILRKRLVPVTLFNPENYPLPQGKQYPDISMEPDPNETRKPSANSNPFGNTKTPKRQRPAG 392 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMA------LTVHGVRVKA--SFPHW 271 +L G K +A+ RI+ A T G R+ S P W Sbjct: 393 SLIASEGNKGVAMLRIEHFKRAFHSEEDDKPFYIATEDGKRIGIIPSQPFW 443 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 55/187 (29%) Query: 10 SFIKVCGKSAIPFLQAIITA---------DVLTLPYKI---------------------- 38 SF+K+ G A FL ++T+ ++ T+ Sbjct: 23 SFLKIRGPEAPKFLNGLVTSKLLPAFTKKNLTTINPHQEDKNNQLELDFDETHSNWGVFN 82 Query: 39 ------------ARGSAILTPQGKILLYFLISKIEE----------DTFILEIDRSKRDS 76 + IL +G++L L+ ++LE D S + Sbjct: 83 EMGYNGSYISRFGTYTGILNSKGRLLTDTLLYPSPLCHGTKKSMAWPEYLLEFDPSIGST 142 Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136 L L + L S V ++ G SW+ DE I++VL T N + Sbjct: 143 LNKMLDLHVLTSKVKTKLY--EGGFTSWDMRILLPGLQAEDENPWISNVLEPSTMTKNPQ 200 Query: 137 IASDIKT 143 A Sbjct: 201 DAQAFAA 207 >gi|299537719|ref|ZP_07051008.1| aminomethyltransferase [Lysinibacillus fusiformis ZC1] gi|298726698|gb|EFI67284.1| aminomethyltransferase [Lysinibacillus fusiformis ZC1] Length = 367 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ ++ ++ Sbjct: 53 SHMGEILVTGPDALGFLQNLLSNDVSKIVDGQAQYTAMCYEDGGVVDDLLTYKLADNHYL 112 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + + ++ L F Sbjct: 113 LCVNAANIEKDYDWMMENQHQYDVTIDNQSDAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 ++ + NV + + + E F ++ ++ +L + + + Sbjct: 173 FRFQENVEVAGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILE-AGQEKGVVPAGLGC 231 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G+ + +TI P +A + + L K +IG E + + + RK Sbjct: 232 RDTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEGFIGHEALVAQKENGLPRKL 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + D EIG + A+ ID I + + Sbjct: 289 VGIEMVDKGIPRHGYKVFKDGQEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGTELEI 346 Query: 258 TVHGVRVKAS 267 + G +K Sbjct: 347 EIRGKHLKVI 356 >gi|313902420|ref|ZP_07835823.1| aminomethyltransferase [Thermaerobacter subterraneus DSM 13965] gi|313467351|gb|EFR62862.1| aminomethyltransferase [Thermaerobacter subterraneus DSM 13965] Length = 372 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 112/305 (36%), Gaps = 46/305 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A LQ ++T DV L A + + TP+G I+ L+ ++ E ++ Sbjct: 59 SHMGEIEISGPGARQALQRLVTNDVERLAPGRALYTVMCTPEGGIVDDLLVYQVAEQRYM 118 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 L ++ + S +D + + V + + + +++ + + Sbjct: 119 LVVNAANTASDLDWVREHVAGPEVTVADRSLETALIALQGPRAQAILARVTDGIDLESLR 178 Query: 115 -------------------------FIDERFSIADVLLHRTWGHNEK-IASDIKTYHELR 148 F+ + A G +E + + + LR Sbjct: 179 PFHFVGGWEGMISRTGYTGEDGFEIFLSWEGAPAIWRGILAAGQDEGLVPAGLGARDTLR 238 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + + T P +A +D + + KG +IG+E + R + + + +K + Sbjct: 239 FEACLPLYGQELDRDTS-PLEAGLDFV--VKWDKGPFIGREALLRQREQGLRKKLVGLRL 295 Query: 209 GTDDLPPSGSPILTD-DIEIGTL--GVVVGKKA--LAIARIDKVDHAIKKGMALTVHGVR 263 + +G P+L D E+G + G V LA+A + + +A+ + G Sbjct: 296 LEPGVARTGYPVLDDEGREVGRVTSGTVAPTLGASLALAYVPPSLAVPGRRLAVGIRGRA 355 Query: 264 VKASF 268 V A Sbjct: 356 VAAQV 360 >gi|46199771|ref|YP_005438.1| aminomethyltransferase [Thermus thermophilus HB27] gi|55981790|ref|YP_145087.1| hypothetical protein TTHA1821 [Thermus thermophilus HB8] gi|46197398|gb|AAS81811.1| aminomethyltransferase [Thermus thermophilus HB27] gi|55773203|dbj|BAD71644.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 261 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 77/238 (32%), Gaps = 37/238 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + + G A FLQ T D+ L L +G+I + E L Sbjct: 22 GVLLLRGPDAFSFLQGQGTRDLRRLSGPSGVL--FLNHKGQIEEAATLFPHPEG--FLLA 77 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + L +L Y + V + P+ ++ + +E Sbjct: 78 PWGSLEGLERRLRRYIVFDQVELVALPLFRLLHADGREEV-------------------- 117 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 G + A + Y + G+ + P + L+ + KGCY+GQE Sbjct: 118 --GERAEGALPAELYPLYTLLKGLPLLSD---IQGELPQSVGL--LHLVDYGKGCYVGQE 170 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT----LGVVVGKKALAIAR 243 +++R + + + + + P+ + + +G L G LA+ R Sbjct: 171 IMARTEGKEVPYRLVGLRALEGGEAPAA--LTLEGKRVGEAKRLLETPFGLLGLAVVR 226 >gi|167738162|ref|ZP_02410936.1| Glycine cleavage T-protein (aminomethyl transferase) family protein [Burkholderia pseudomallei 14] Length = 172 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 D + ++++ + + L + G + P D++ G++ KG Sbjct: 14 DARVPALEAALPRVSAAVWDW--LDVRAGEPRITQPAV-EQFVPQMVNFDVIGGVNFRKG 70 Query: 184 CYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 CY GQEVV+R Q+R I++R + D +G + D G++V A Sbjct: 71 CYPGQEVVARSQYRGTIKRRTALAHVAAGTDAAHAGVELYHSDDPGQPCGMIVNAAAAPE 130 Query: 242 ARIDKV 247 +D + Sbjct: 131 GGVDAL 136 >gi|295695377|ref|YP_003588615.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912] gi|295410979|gb|ADG05471.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912] Length = 376 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 102/300 (34%), Gaps = 56/300 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G + PFLQ ++T +V L A + + P G + L+ +++ D ++ Sbjct: 50 SHMGEFEISGSESTPFLQRMVTGNVAALSPGRAMYTMMCLPSGGTVDDLLVYRLDADRYM 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105 L ++ + + L ++L V I + +L+ Sbjct: 110 LVVNAANTAKDLTWLQEHRLP-GVEIADRTEETALLALQGPAAVEILRAAKGDGENLKPF 168 Query: 106 --------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 E F D + D LL G I + + Sbjct: 169 RVEVGSVAGVQGLISRTGYTGEDGFELYVPADRGLELWDRLLE-IGGPMGLIPAGLGARD 227 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + + I P +A ++ + G +IG++ + + R + R+ Sbjct: 228 TLRLEAALPLYGHELT-EEITPLEAGLEAF--VKWDAGDFIGRDALLSQRERGVTRRLAG 284 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTV 259 ++ +P SG + + EIG + V LA+ + + G AL V Sbjct: 285 LVMVDRGIPRSGYAVKSRGREIGWVTSGSFGPTVQRNIGLAMVEEEFA----RPGQALEV 340 >gi|154686720|ref|YP_001421881.1| glycine cleavage system aminomethyltransferase T [Bacillus amyloliquefaciens FZB42] gi|166989724|sp|A7Z6M4|GCST_BACA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|154352571|gb|ABS74650.1| GcvT [Bacillus amyloliquefaciens FZB42] Length = 366 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 106/316 (33%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V GK A+ FLQ ++T DV L A +A+ P G + LI + E ++ Sbjct: 50 SHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCYPDGGTVDDLLIYQKSESCYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112 L I+ S + I L + +V + Q +L+ + Sbjct: 110 LVINASNIEKDIAWLTEH-TEGDVTLTNQSDGISLLAVQGPNAQSVLAKLTECDLSSLKP 168 Query: 113 SSFIDERF-SIADVLLHRTWGHNEK---------------------------IASDIKTY 144 +FID+ + VLL RT E + + Sbjct: 169 FTFIDKADVAGRQVLLSRTGYTGEDGFELYCRNEDAVHLFKEILAAGEHEGLVPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ V+ + + RK Sbjct: 229 DTLRFEAKLALYGQELTKD-ITPIEAGIGF--AVKHKKDSDFFGKSVLREQKEKGAPRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 + +P G + D + IG + LA+ + + + + + + Sbjct: 286 VGLEMIEKGIPRHGYAVKKDGVPIGEVTTGTQSPTLKKNIGLALIKTEFSEVGTEVEVEI 345 Query: 258 TVHGVRVKASFPHWYK 273 V+ K +YK Sbjct: 346 RKKTVKAKIVRTPFYK 361 >gi|167619726|ref|ZP_02388357.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily [Burkholderia thailandensis Bt4] Length = 174 Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 10/156 (6%) Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + D L ++++ + + L + G + P D++ G++ Sbjct: 13 AELDARLPALEAALPRVSAAVWDW--LDVRAGEPRVTLPAV-EQFVPQMVNFDVIGGVNF 69 Query: 181 TKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 KGCY GQEVV+R Q+R I++R + D +G + D G++V A Sbjct: 70 RKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDAAHAGVELYHSDDPGQPCGMIVNAAA 129 Query: 239 LAIARIDKVDH----AIKKGMA-LTVHGVRVKASFP 269 +D + A++ G L G P Sbjct: 130 APEGGVDALVEIKLAALESGSVHLASAGGPALTFLP 165 >gi|288920191|ref|ZP_06414507.1| folate-binding protein YgfZ [Frankia sp. EUN1f] gi|288348441|gb|EFC82702.1| folate-binding protein YgfZ [Frankia sp. EUN1f] Length = 415 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 102/320 (31%), Gaps = 80/320 (25%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF------ 55 + V SN+ +++ G + +L ++ + + L + +L+P G + + Sbjct: 52 ALVDRSNREVVRITGADRLTWLHSVTSQHLSQLAPMHGTEALVLSPHGHVEHHLVLADDG 111 Query: 56 --------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN------------ 89 L++ ++ F++ ++ + + L R++ Sbjct: 112 IATWIDVEPTTAPRLLAFLQSMRFLMRVEPVDVTAEVAVLSLTGPRADEVAAAVFGPAAL 171 Query: 90 -----------------------VIIEIQPINGVVLSWNQEHTFSNSSFIDE---RFSI- 122 V P++ + Q S+ R + Sbjct: 172 PAPLAGTGTGGATGAVPRTSAGVVTSGPYPVSHAAPAGTQAAPDEQSAPDAPAGGRLPLI 231 Query: 123 ------ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 D+L+ R+ + + RI N + PH Sbjct: 232 RRMPHGLDLLVARSDLAATADRLTSAGAALIGLSAFEAQRIASRQPRLNRE-TDHRTIPH 290 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 + L + + L KGCY GQE V+R+ + +R +++ + G P+ +G Sbjct: 291 EVGW-LASAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAQGCPVTAAGRTVG 349 Query: 229 TLGVV-----VGKKALAIAR 243 +G +G ALA+ + Sbjct: 350 FVGSSEMHHELGPIALAVVK 369 >gi|62738815|pdb|1YX2|A Chain A, Crystal Structure Of The Probable Aminomethyltransferase From Bacillus Subtilis gi|62738816|pdb|1YX2|B Chain B, Crystal Structure Of The Probable Aminomethyltransferase From Bacillus Subtilis Length = 365 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 89/285 (31%), Gaps = 53/285 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ + T DV L A+ +A P G + LI + E+ ++ Sbjct: 53 SHXGEVEVSGNDSLSFLQRLXTNDVSALTPGRAQYTAXCYPDGGTVDDLLIYQKGENRYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L I+ S D + + +V I+ Q +L+ Sbjct: 113 LVINASNIDKDLAWXKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 171 Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144 +FIDE R A + + + I + Sbjct: 172 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAXHIWKKIIDAGDAYGLIPCGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR I + I P +A + + K + G+ V+S + RK Sbjct: 232 DTLRFEANIPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 + +P G + + +G + LA+ Sbjct: 289 VGLEXIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 333 >gi|226311884|ref|YP_002771778.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599] gi|226094832|dbj|BAH43274.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599] Length = 367 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G++A+ +LQ + T DV L A+ S + P G + L+ K +D ++ Sbjct: 52 SHMGEVDVKGENALTYLQRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKLL--------FY 84 L I+ +S++ KL F+ Sbjct: 112 LVINAGNIDKDYAWLEEHLIPGVTIENISPQTAQIAIQGPLAESILQKLTTTDLSQIGFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 + +V + P + E F D + D+LL + + Sbjct: 172 RFERDVQVSGIPGLVSRTGYTGEDGFEIYLDADRAAELWDILL-DAGKEEGLLPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + + K +IGQEV+ + RK Sbjct: 231 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKVDKEVPFIGQEVLKAQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P + P+ + IG + LA+ + + + + Sbjct: 288 VGIEMIDRGIPRTHYPVYVGEELIGEVTTGTQSPTLKKNVGLALVKTEHAAIGTPVEVEI 347 Query: 258 TVHGVRVKASFPHWYK 273 ++ + +YK Sbjct: 348 RGKRLKAEVVAAPFYK 363 >gi|288553360|ref|YP_003425295.1| glycine cleavage system aminomethyltransferase T [Bacillus pseudofirmus OF4] gi|288544520|gb|ADC48403.1| glycine cleavage system aminomethyltransferase T [Bacillus pseudofirmus OF4] Length = 365 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 112/318 (35%), Gaps = 57/318 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G +A+ +LQ ++T DV L A+ +A+ P G + LI + ED ++ Sbjct: 52 SHMGEVEVKGDNALAYLQKMMTNDVSKLVDNQAQYTAMCYPNGGTVDDLLIYRKSEDDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV------------------------IIEIQPINGV-V 101 L I+ S D +D L +K+ + V + Q ++ + Sbjct: 112 LVINASNIDKDMDWLNQHKI-AGVEVNNISDDIAQLAIQGPIAEEILQTLTDQDLSDIRF 170 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144 + + S + R + E+ A + Sbjct: 171 FRFQDDVDLSGIKALVSRTGYTGEDGFEIYLQAEQAAELWSRLLETGSSKGLVPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNIIR 201 LR + + S I P +A + G ++ G +IG++ + + + + R Sbjct: 231 DTLRFEAKLPLYGQELT-SEISPLEAGI----GFAVKVGKEEDFIGKDALKKQKEEGLKR 285 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGM 255 K + +P +G +L +D +IG + LA+ + + + + Sbjct: 286 KLVGLEMVDKGIPRTGYEVLANDKQIGFVTTGTQSPTLKKNVGLAVIDSEYTEAGTEVYV 345 Query: 256 ALTVHGVRVKASFPHWYK 273 + ++ +YK Sbjct: 346 QVRKKTLKAMVVKTPFYK 363 >gi|315605231|ref|ZP_07880277.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 180 str. F0310] gi|315313048|gb|EFU61119.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 180 str. F0310] Length = 387 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 46/271 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + I V G +L ++ + + + +R IL+P+G+I + S E T + Sbjct: 43 PDLAVIDVGGADRATWLTSLASQVLTGMAPGDSRELLILSPEGRIEHWAGASDDGETTHL 102 Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---------- 114 + ++RS DS ++ L + LR +V + + V + +++ Sbjct: 103 I-VERSDADSFVEFLESMRFALRVSVGVRDAVVFSSVRAGANTADAASALPGIEWTWEDP 161 Query: 115 -----------FIDERFSIADVLL--HRTWGHNEKIASDIK---------------TYHE 146 F ER A + H D + Sbjct: 162 WPGVAEGGAAYFQGERHPGARTPMMYHVASPEGAASFEDAWLGVTEGGSRRRAGILAWEA 221 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 +RI + + + P + L + KGCY GQE ++R+ + +R Sbjct: 222 MRIAAWKPRLGRE-VDARTIPAEVDW-LRTAVHTDKGCYRGQETIARVINLGRPPRRLTY 279 Query: 207 ITGTD---DLPPSGSPILTDDIEIGTLGVVV 234 + DLP G+PI ++G + Sbjct: 280 LQLDGLRADLPAPGTPIEVGGRQVGVITSAA 310 >gi|167461342|ref|ZP_02326431.1| glycine cleavage system aminomethyltransferase T [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383986|ref|ZP_08057716.1| glycine cleavage system aminomethyltransferase T-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151463|gb|EFX44650.1| glycine cleavage system aminomethyltransferase T-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 368 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G ++ FLQ + T D+ + + + + P G ++ LI ++ E ++ Sbjct: 50 SHMGEVFVSGPDSLSFLQHLTTNDLSKIQDGQCQYTLMCYPDGGVVDDLLIYRLSEHKYM 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105 I+ S + ++ + + +S V ++ +L+ Sbjct: 110 AVINASNIEKDLEWIQQHN-KSGVKLDNVSDRTALLALQGPLAETVLMKLVEPGQHEKIR 168 Query: 106 --------QEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASD 140 Q+ S I R + + I + Sbjct: 169 ELKPFRFVQDVAVSGKRAILSRTGYTGEDGFELYVESGDAVYLWNELLRVGEPEGLIPAG 228 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR + + + I P +A + + L KG +IG++ +S + + + Sbjct: 229 LGARDTLRFEARLPLYGQEL-SADISPLEAGLSFF--VKLDKGDFIGRKALSLQKEQGVP 285 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256 RK + +P S P+ D +IG + L +A ID A+ + Sbjct: 286 RKLAGVELLERGIPRSHYPVYADGKQIGEITTGTQSPTLKKSVGLALIDSAYSALDTELY 345 Query: 257 LTVHGVRVKASF 268 + + G ++KA Sbjct: 346 VEIRGRQIKAKV 357 >gi|260435667|ref|ZP_05789637.1| glycine cleavage T-protein [Synechococcus sp. WH 8109] gi|260413541|gb|EEX06837.1| glycine cleavage T-protein [Synechococcus sp. WH 8109] Length = 264 Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 98/265 (36%), Gaps = 26/265 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIEEDTFILEI 69 +++ G A FLQ +AD+ L + LT G++ D +L Sbjct: 13 LRLNGSGARQFLQGQTSADLNALQSGDFLQTCWLTATGRLRAVLELRFDAEGADVIVLAG 72 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + S + D+++F R + +QP+ G + + + + D D L Sbjct: 73 EASAIHAGFDQVIFPADR----VRLQPL-GQLRRLQWLEPMAATVWCDP-----DAALPE 122 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 W E A+ + R+ G + P + + +S KGCY+GQE Sbjct: 123 PWASGE--AATATALEQWRLQSGFPPGPGEL-NGETNPLELGLVAQ--VSTKKGCYLGQE 177 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245 ++++ + ++++ + L + + + D G + + + LA+ R Sbjct: 178 TMAKLIGQAGVKQQLRCWSCPSPLAAA-TKLTLDGERAGVITSALERDGTWLGLALVRRQ 236 Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270 + +G +G +++ P Sbjct: 237 CLASPTLEGP----NGEQLQIRQPE 257 >gi|288572847|ref|ZP_06391204.1| glycine cleavage system T protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568588|gb|EFC90145.1| glycine cleavage system T protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 364 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 52/308 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A F+Q++++ D+ + + + + P+G ++ L+ K+ D F+L ++ S Sbjct: 56 ITGPDAFSFVQSLVSNDISVMCDGQVQYNMMCYPEGGVVDDLLVYKVSNDRFLLVVNASN 115 Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID------------ERF 120 D + + + L +V E P V + +D E Sbjct: 116 VDKDFEWVKSH-LSGDVKAENASPSTAEVALQGPLAQEILQTIVDVDLSDIGFFFFRENV 174 Query: 121 SIADV--LLHRTWGHNEKIASDIKTYHE---------------------------LRINH 151 S+A V L+ RT E + E LR Sbjct: 175 SVAGVKALVSRTGYTGEDGFEVYVDWEEGSKVWNAIMEAGKTFGILPIGLGARDSLRFEA 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + + I P +A + + L +IG E + +++ + RK + Sbjct: 235 CLPLYGHEI-DRDITPLEAGLGFF--VKLDSSDFIGSEALRKMKAEGLPRKTVALKMVDK 291 Query: 212 DLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G P+ D E+G + ALA+ + K + + + Sbjct: 292 GVPRHGYPVSVDGREVGHVTTGGYSPTLEENIALALVEASSAEVGGKMNVVIRGKDKAAE 351 Query: 266 ASFPHWYK 273 +Y+ Sbjct: 352 VVKKPFYR 359 >gi|213419535|ref|ZP_03352601.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 228 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 34/170 (20%) Query: 82 LFYKLRSNVIIEIQPINGVV------------------------LSWNQEHTFSNSSFID 117 Y + S V+I ++ + + T Sbjct: 1 KKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPA 60 Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 ERF + A++L + G E ++ + + L I GI + P Sbjct: 61 ERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIEAGIPVIDA-ANSGQFIPQATN 117 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220 + L GIS KGCY GQE+V+R + R ++ ++ G +P +G + Sbjct: 118 LQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDL 167 >gi|227497040|ref|ZP_03927291.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces urogenitalis DSM 15434] gi|226833481|gb|EEH65864.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces urogenitalis DSM 15434] Length = 422 Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 64/307 (20%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67 + I V G + +L + + + L + +L QG I L + + +T L Sbjct: 53 RDVIAVSGPDRLSWLTTLSSQVLTGLAPGDGGAEALLLDAQGHITH-ALAAVDDGETLFL 111 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTFSNSSFID 117 L D L + V + + V+ + ++ +++ D Sbjct: 112 VTQAGDGPVLADFLDSMRFMLAVQVCEREELAVLGAHASGLAALETAAEQAGAGIATWHD 171 Query: 118 E----------------------RFSIADVLLHRTWGHNEKI-------------ASDIK 142 R +++ + + Sbjct: 172 PWPGVVPGGTSYDVGLGSQDHPYRHPGELYRAGYVIVAADQVRALVTGLAEQGLRPAGVL 231 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIR 201 + LR+ G + + + PH+ +D L + LTKGC+ GQE ++R + Sbjct: 232 AWEALRVEAGRPRWARE-VDARAIPHE--LDWLRTAVHLTKGCFPGQETIARTLNLGRPP 288 Query: 202 KRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253 +R I+ +LP G +L + +G + VV G ALA+ R A+ Sbjct: 289 RRLTILQLDGLSGELPSPGDRVLMGERAVGAVTSVVRHHDYGPMALALLR-----RAVPV 343 Query: 254 GMALTVH 260 ALTV Sbjct: 344 EAALTVE 350 >gi|269837316|ref|YP_003319544.1| glycine cleavage system T protein [Sphaerobacter thermophilus DSM 20745] gi|269786579|gb|ACZ38722.1| glycine cleavage system T protein [Sphaerobacter thermophilus DSM 20745] Length = 371 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 106/313 (33%), Gaps = 57/313 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KIEEDT 64 L + ++V G A FLQ + T DV L A+ S +L P G ++ L+ + ++ Sbjct: 51 LGHMGQVEVAGPDAQAFLQYVTTNDVTALAPGEAQYSLLLYPDGGVVDDILVYLRPSGES 110 Query: 65 FILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPIN------------------------- 98 +++ ++ + D + L + RS++ + + ++ Sbjct: 111 YLVVVNAANTDKDLAWLAEQREKRSDLDVTVTDLSPRLGMLAIQGPKAEEILQQVTSVNL 170 Query: 99 GVVLSWNQEHTFSNSSF------------------IDERFSIADVLLHRTWGHNEKIASD 140 G + ++ + E+ L R Sbjct: 171 GEIAYFHAAEIDVDGVPCLVSRTGYTGEDGFEIYCPIEKTEQLWDRLLRVGEPMGLQPIG 230 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ + + + I P +A + + L KG +IG+E + + + + Sbjct: 231 LGARDTLRLEARMPLYGNEI-SAEISPLEAGLGF--AVKLDKGDFIGREALQKQKAEGVK 287 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253 R+ + +P + + D +G + +AI D+ + K Sbjct: 288 RRLVGFKLVERGGVPRTHYEVQVDGRTVGFVTSGTTSPTLGENIGMAIV--DREVAGVGK 345 Query: 254 GMALTVHGVRVKA 266 + + + G V+A Sbjct: 346 PLDIIIRGKPVRA 358 >gi|154283223|ref|XP_001542407.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410587|gb|EDN05975.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 162 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 46/144 (31%) Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------------------DLPP 215 + GI KGCY GQE+ R HR ++RKR + + D LPP Sbjct: 1 MGGIDFHKGCYTGQELTIRTHHRGVVRKRILPVQLYDIDETMPKTEIPYYSSESKLVLPP 60 Query: 216 SGSPIL----TDDIEIGTLGVVVGKKALAIARID----------------------KVDH 249 +G+ I G VG LA+ R++ + Sbjct: 61 AGANIAKVSSKKGRSAGKFLSGVGNIGLALCRLEMMTDIVFTDESSQYGPDQEFKISWEA 120 Query: 250 AIKKGMALTVHGVRVKASFPHWYK 273 + G+ T V+VKA P W + Sbjct: 121 DPEAGVEKT-GEVKVKALVPPWMR 143 >gi|323347833|gb|EGA82095.1| Iba57p [Saccharomyces cerevisiae Lalvin QA23] Length = 497 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273 G L G +A+ R + A + +++ P W +K Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|207343770|gb|EDZ71127.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 241 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 61 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 120 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 121 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 178 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273 G L G +A+ R + A + +++ P W +K Sbjct: 179 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 234 >gi|6322582|ref|NP_012656.1| Iba57p [Saccharomyces cerevisiae S288c] gi|1352922|sp|P47158|CAF17_YEAST RecName: Full=Putative transferase CAF17, mitochondrial; AltName: Full=57 kDa iron-sulfur cluster assembly factor for biotin synthase- and aconitase-like mitochondrial proteins; AltName: Full=CCR4-associated factor 17; Flags: Precursor gi|1015847|emb|CAA89653.1| CAF17 [Saccharomyces cerevisiae] gi|151945187|gb|EDN63438.1| ccr4 associated factor [Saccharomyces cerevisiae YJM789] gi|190409594|gb|EDV12859.1| hypothetical protein SCRG_03773 [Saccharomyces cerevisiae RM11-1a] gi|256273115|gb|EEU08070.1| Iba57p [Saccharomyces cerevisiae JAY291] gi|259147585|emb|CAY80836.1| Iba57p [Saccharomyces cerevisiae EC1118] gi|285813009|tpg|DAA08907.1| TPA: Iba57p [Saccharomyces cerevisiae S288c] Length = 497 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273 G L G +A+ R + A + +++ P W +K Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|152976624|ref|YP_001376141.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039312|sp|A7GSN8|GCST_BACCN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|152025376|gb|ABS23146.1| glycine cleavage system T protein [Bacillus cytotoxicus NVH 391-98] Length = 366 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 110/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDTKVVNVSNEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++V+++ P + E F ++ I + LL + + Sbjct: 172 KFKNDVLVDGIPALVSRTGYTGEDGFEIYCKSEDAIKIWEKLLE-VGEEDSLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+EV+ + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKEVLKEYKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID AI + + + Sbjct: 288 VGIEVIERGIPRTHYPVYVGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAIDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RKKRVKAVV 356 >gi|78211782|ref|YP_380561.1| hypothetical protein Syncc9605_0230 [Synechococcus sp. CC9605] gi|78196241|gb|ABB34006.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 264 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 103/265 (38%), Gaps = 26/265 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIEEDTFILEI 69 +++ G A FLQ +AD+ L + LT G++ D +L Sbjct: 13 LRLNGSGARQFLQGQTSADLNALQSGDLLQTCWLTATGRLRAVLELRFDAEGADVIVLAG 72 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + S + D+++F R + +QP+ + + N++ + + A+ L Sbjct: 73 EASAVHAGFDQVIFPADR----VRLQPLAEL---RRLQWLEPNAAAV---WCDAEAELPE 122 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 W E A+ + + R+ G + P + + IS KGCY+GQE Sbjct: 123 PWASGE--AATVMALEQWRLQSGFPPGPGEL-NGETNPLELGLVAQ--ISTEKGCYLGQE 177 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245 ++++ + ++++ + + L P+ + + + G + + + LA+ R Sbjct: 178 TMAKLIGQAGVKQQLRRWSCSSALSPT-AKLTLEGERAGVITSALERDGTWLGLALVRRQ 236 Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270 + +G +G +++ P Sbjct: 237 CLASPTLEGP----NGEQLQIRQPE 257 >gi|297570831|ref|YP_003696605.1| folate-binding protein YgfZ [Arcanobacterium haemolyticum DSM 20595] gi|296931178|gb|ADH91986.1| folate-binding protein YgfZ [Arcanobacterium haemolyticum DSM 20595] Length = 366 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 94/301 (31%), Gaps = 42/301 (13%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + L + ++V G L I + D + + +L + + + + + Sbjct: 30 AFSLLDWDVVRVAGADCARLLHVISSRDFERVAPGTSTEMLVLDAN-GHVAHAAGAVVAD 88 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--------------VLSWNQEH 108 D L DR +L+D ++ + V ++ V + W Sbjct: 89 DAIWLLTDRGLGQALVDHIVKMRFMMRVEADVVDAVAVGALVDVPGSVCDVALAVWQDPW 148 Query: 109 TF-----SNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-------------YHELRIN 150 ++ DE + S + + R+ Sbjct: 149 PVTAPGGAHYGVADEDHPAFGRTCFVAIAPRDAQDSVVSAFKAAGFAPAGKIAWEAARVA 208 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIIT 208 + + + PH+ L + KGCY GQE V+++ + +R + + Sbjct: 209 DWRPSFSHEGAQG-VLPHEVDW-LRTAVHTAKGCYPGQETVAKLVNLGKPPRRLAFLYLE 266 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVR 263 G ++LPP G + D G + V G ALA+ + + A+ V Sbjct: 267 GGEELPPVGCEVTLDSRVAGVVTSVARSADDGPIALALLKRNVPADAVVTVGDFVASQVE 326 Query: 264 V 264 + Sbjct: 327 I 327 >gi|320095432|ref|ZP_08027109.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 178 str. F0338] gi|319977625|gb|EFW09291.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 178 str. F0338] Length = 400 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 91/284 (32%), Gaps = 53/284 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + + V G+ +L ++ T V + +R +L+P+G+I + S T + Sbjct: 56 PDLAVVDVSGEDRQTWLTSLSTQVVTGMAPGDSRELLVLSPEGRIEHWAGASDDGTTTHL 115 Query: 67 L--EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------------- 103 + +D +D + + LR V + ++ V S Sbjct: 116 IAEGMDAGALAGFLDSM-RFALR--VRVSVRDDLAVYASVRAGGNDAAAVGSLPGVEWTW 172 Query: 104 ---WNQEHTFSNSSFIDERFS--------------IADVLLHRTWGHNEKIASDIKTYHE 146 W + + R +A + + + + Sbjct: 173 EDPWPGVAPGGAAYYQGARHPGSRTPMMFHVVPRAMAGAFEGAWLEADGHRMAGMLAWEA 232 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 +R+ D + P + L + KGCY GQE ++R+ + +R Sbjct: 233 MRVAAWRPRLGAD-TDARSIPPEVDW-LRTAVHTDKGCYRGQETIARVVNLGRPPRRLAY 290 Query: 207 ITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242 + +LP G+ I +G + V G ALA+ Sbjct: 291 LQLDGSRSELPEPGTRIEVGGRTVGVVTSVARHADEGPVALALL 334 >gi|323154589|gb|EFZ40788.1| tRNA-modifying ygfZ domain protein [Escherichia coli EPECa14] Length = 106 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + +A +GK+ + + Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78 Query: 61 EEDTFILEIDRSKRDSLIDKLL--FYKL 86 + +E RS R+ + +L Y L Sbjct: 79 GDGFAWIE-RRSVREPQLTELKNMRYSL 105 >gi|228992970|ref|ZP_04152894.1| Aminomethyltransferase [Bacillus pseudomycoides DSM 12442] gi|228999019|ref|ZP_04158601.1| Aminomethyltransferase [Bacillus mycoides Rock3-17] gi|229006567|ref|ZP_04164203.1| Aminomethyltransferase [Bacillus mycoides Rock1-4] gi|228754706|gb|EEM04115.1| Aminomethyltransferase [Bacillus mycoides Rock1-4] gi|228760636|gb|EEM09600.1| Aminomethyltransferase [Bacillus mycoides Rock3-17] gi|228766827|gb|EEM15466.1| Aminomethyltransferase [Bacillus pseudomycoides DSM 12442] Length = 366 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVTGTDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGNTKVVNVSSEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++V+++ P + E F E L + + Sbjct: 172 KFKNDVLVDGTPALVSRTGYTGEDGFEIYC-KSEDAPKLWEKLLEAGAEDGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKETLKEYKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A +D A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVYVGEEKIGEVTSGTQSPTLKKSIGLALVDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|33864773|ref|NP_896332.1| hypothetical protein SYNW0237 [Synechococcus sp. WH 8102] gi|33632296|emb|CAE06752.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 265 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 44/275 (16%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-----------LYFLISK 59 +++ GK A FLQ TAD+ L + S LT G++ L+ Sbjct: 13 MLRLEGKGARDFLQGQTTADLSGLVDGELQQSCWLTATGRLRALLELRLDATGADVLVLA 72 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 + + D+ + +L + + V Q ++ V L+ Sbjct: 73 GDAEAVSRGFDQVIFPADRVRLNASRRQRRV----QGLDPVGLAL--------------- 113 Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + D L + ++ +D R+ G + P + + IS Sbjct: 114 WIGKDQPLPEELNASTQLEND--ALERHRLQQGFPPGPAEM-NGETNPLELGL--SGRIS 168 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK--- 236 L KGCY+GQE ++++ + ++++ L P G + GT+ + Sbjct: 169 LDKGCYLGQETMAKLTGKGGVKQQLRCWHSEQPLHP-GDQLNVGSDRAGTITSALSHPGA 227 Query: 237 -KALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 LA+ R +D + +G G V+ P Sbjct: 228 ALGLALVRRQFLDLSSVEGPT----GQTVQLGQPA 258 >gi|296120503|ref|YP_003628281.1| folate-binding protein YgfZ [Planctomyces limnophilus DSM 3776] gi|296012843|gb|ADG66082.1| folate-binding protein YgfZ [Planctomyces limnophilus DSM 3776] Length = 329 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 58/308 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ + FLQ T DV L +G+I+ + I + ED+ ++ I Sbjct: 19 VRGQHRVRFLQNFCTNDVARLTSNTGVEVFFPNVKGRIVGHGWIHAL-EDSLVMTIGAGT 77 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFIDERFSIADVLLHRTW 131 SL+ L Y + +V + L + ++ S +R A+ + Sbjct: 78 GTSLLPHLERYIITEDVTFTKAALKDTWLVGGETANQLWAEISQQQQRDLAAESVHQMIA 137 Query: 132 GHNEKIA----------------------------------SDIKTYHELRINHGIVDPN 157 G + A + R + G+ Sbjct: 138 GVGWRAALMTGWSLPVVAVFMDEHAAREELSTLASLAAIRKETPLDFDRFRASVGMGWMG 197 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-- 215 D+ + ++ + IS KGCY+GQE ++R+ K + ++ L Sbjct: 198 IDYSDAQ-LAQESGRTAV-AISFHKGCYLGQEPIARLDAMGHTNKELVRLSTEVSLSDQD 255 Query: 216 ----SGSPILTDD--IEIGTLGV------VVGKKALAIARID-KVDHAI-KKGMALTVHG 261 +G+ + D +G + +G L R +V++ + G G Sbjct: 256 KSSWAGAELFADSEPKSVGVITTFCPHDDQLGGVGLGYVRTKWQVENQMLHVGTP---EG 312 Query: 262 VRVKASFP 269 + P Sbjct: 313 PTINVHVP 320 >gi|317122029|ref|YP_004102032.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885] gi|315592009|gb|ADU51305.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885] Length = 372 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 110/305 (36%), Gaps = 46/305 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A LQ ++T DV L A + + TP+G ++ L+ ++++ ++ Sbjct: 59 SHMGEIEVSGPGARQALQRLVTNDVERLVPGRALYTVMCTPEGGVVDDLLVYQLDDQRYM 118 Query: 67 LEIDRSKRDSLIDKLLFYK------------------------------LRSNVIIEIQP 96 L ++ + ++ + + + +V +E Sbjct: 119 LVVNAANTARDLEWVREHAGGPQVTVVDRSLETALLALQGPRAQAILSLVTDDVDLEALR 178 Query: 97 INGVVLSWNQ-------EHTFSNSSFIDERFSIADVLLHRTWGHNEK-IASDIKTYHELR 148 V W F+ + A G E + + + LR Sbjct: 179 PFHFVGGWEGMISRTGYTGEDGFELFVSWDGAPAIWRGILAAGEPEGLVPAGLGARDTLR 238 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + + + T P +A +D + + KG ++G++ + R + + + +K + Sbjct: 239 LEACLPLYGQELDLETT-PLEAGLDFV--VKWDKGPFLGRDALLRQRQQGLRKKLVGLRL 295 Query: 209 GTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 + +G +L + +G + + ++A+A + A+ + +A+ + G Sbjct: 296 LEPGVARTGYRVLDERGEPVGRVTSGTVAPTLQASIALAYVPPAVAAVGQRLAVEIRGRA 355 Query: 264 VKASF 268 V A Sbjct: 356 VAAQV 360 >gi|151337026|gb|ABS00962.1| aminomethyltransfersae [Thermus aquaticus] Length = 260 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 80/241 (33%), Gaps = 40/241 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + + G A FLQ T D+ L L +G+I + E L Sbjct: 22 GLLLLKGPDAFGFLQGQGTRDLRRLKGPGGVL--FLNHRGQIEEAATLFPHPEG--FLLA 77 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 + L +L Y + V++E P+ ++ + +E Sbjct: 78 PWGTLEGLRARLERYIVFDQVVLEELPLYRLLHADGREEVAERG---------------- 121 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 + ++ + + G+ + + P + L+ + KGCY+GQE Sbjct: 122 ------EGGLPLEVFPLYALLKGVP--LLEDIRGE-LPQSVGL--LHLVDYGKGCYVGQE 170 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTL----GVVVGKKALAIARI 244 +++R + + + +R G + L + + +G + G L + R Sbjct: 171 IMARTEGKEVPYRRV----GLEGLKAGEVGELFLEGRRVGEIKRLQRTPFGLLGLGLVRR 226 Query: 245 D 245 + Sbjct: 227 E 227 >gi|218294697|ref|ZP_03495551.1| folate-binding protein YgfZ [Thermus aquaticus Y51MC23] gi|218244605|gb|EED11129.1| folate-binding protein YgfZ [Thermus aquaticus Y51MC23] Length = 257 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 40/241 (16%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + + G A FLQ T D+ L L +G+I + E L Sbjct: 19 GLLLLKGPDAFSFLQGQGTRDLRRLEGPGGVL--FLNHRGQIEEAATLFPHPEG--FLLA 74 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129 L +L Y + V++E P+ ++ + +E Sbjct: 75 PWGALKGLRARLERYIVFDQVVLEELPLYRLLHADGREEVAERG---------------- 118 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 + ++ + + G+ + + P + L+ + KGCY+GQE Sbjct: 119 ------EGGLPLEVFPLYALLKGVP--LLEDIRGE-LPQSVGL--LHLVDYGKGCYVGQE 167 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTL----GVVVGKKALAIARI 244 +++R + + + P + G L + + +G + G L + R Sbjct: 168 IMARTEGKEV----PYRLVGLKGLKAGEVGELFLEGRRVGEIKRLQRTPFGLLGLGLVRR 223 Query: 245 D 245 + Sbjct: 224 E 224 >gi|50288779|ref|XP_446819.1| hypothetical protein [Candida glabrata CBS 138] gi|74637641|sp|Q6FSH5|CAF17_CANGA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49526128|emb|CAG59750.1| unnamed protein product [Candida glabrata] Length = 497 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 64/188 (34%), Gaps = 50/188 (26%) Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSR 193 EK+ D + + ++ +G +D + P ++ P + D N +S KGCY+GQE+ +R Sbjct: 303 EKLEKDSSFFKQCKLQYGFLDGSDAIQPDSLMPLELNFDYFPNTVSNNKGCYVGQELTAR 362 Query: 194 IQHRNIIRKRPMIIT-------------------------------------------GT 210 I+RKR + I G Sbjct: 363 TYSTGILRKRLIPIEFENLSEQAVKLLNECDKYPDIEVEVDPKNQEPEPLQSTAPSPFGN 422 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA----LTVHG--VRV 264 + + + GTL GK +A+ RI+ + LT+ + V Sbjct: 423 SPFGNASTKLRQRKKAAGTLISFDGKYGIALFRIEHFKNIYDTPTPSKFFLTIGQEKIDV 482 Query: 265 KASFPHWY 272 P WY Sbjct: 483 TPQRPIWY 490 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 63/197 (31%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA-----------------------DVLTLPYKI----- 38 N+S+++V G I FL ++T+ D Sbjct: 48 PNKSYLQVRGPDTIGFLNGLVTSKLLPTFVKKNLTTIEVSDEKNKKDTNNNESPEFNEKK 107 Query: 39 -------------------ARGSAILTPQGKILLYFLISKIEE-------------DTFI 66 SA L +GK++ +I ++ Sbjct: 108 GNWGIYNAESHNGPYLSRFGIYSAFLNGKGKLVTDSIIYPSPGVVNDQTEAKIKLYPEYL 167 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 LE D+ ++ +KL + + E +W+ +F + D I +V Sbjct: 168 LEFDKDIIPRMLTSFESHKLHNKIKFE---EVKNTKTWDFFISFPGLTQNDPNPWIDNVY 224 Query: 127 LHRTWGHNEKIASDIKT 143 + T+ N + +++ Sbjct: 225 VPLTYLKNAEASNEFAE 241 >gi|330950069|gb|EGH50329.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae Cit 7] Length = 230 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 42/225 (18%) Query: 81 LLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118 + Y + S V +Q + ++S + S + Sbjct: 1 MRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRADDLIAIRVSPGR 60 Query: 119 -----RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 R + D + R + + ++R+ G V NT P + Sbjct: 61 AELWVRSAQVDSIKARLASQLSEAPLNDWLLGQIRVGIGQVFGNT---REEFIPQMINLQ 117 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEIGTL 230 + G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + +G + Sbjct: 118 AVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFSPVHASAVGNV 177 Query: 231 GVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266 + + LA+ + D + +G AL + + Sbjct: 178 VIAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 222 >gi|323488913|ref|ZP_08094150.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2] gi|323397305|gb|EGA90114.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2] Length = 366 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 115/317 (36%), Gaps = 55/317 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G ++ +LQ ++T DV + A+ +A+ G + L+ KI + ++ Sbjct: 52 SHMGEIFVTGADSLDYLQHLVTNDVSKIQDGQAQYTAMCYEDGGTVDDLLVYKIADQHYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84 L ++ S + ++ +L + Sbjct: 112 LVVNASNIEKDFDWMEASKTGDVTLDNASERFGLLAFQGPLSEQVLQRLTEEDLSTIKPF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKT 143 + +++V + Q + + E+ F + + S+ + +L T G E + + Sbjct: 172 RFKNDVEVAGQKVILSRTGYTGENGFEIYAAPEALVSLWEKIL--TEGEPEGVLPVGLGA 229 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR + + I P +A ++ + + L K ++G++ ++ + + RK Sbjct: 230 RDTLRFEACLALYGQEL-SKDITPLEAGINFV--VKLKKEQDFLGKKALAAQKEAGVPRK 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 I +P G P+ D +IG + LA+ + + I+ + Sbjct: 287 LVGIEMIDKGIPRHGYPVYVGDQKIGEVTTGTQSPTLKKNIGLALVSSEYAELGIELEVE 346 Query: 257 LTVHGVRVKASFPHWYK 273 + ++ K +YK Sbjct: 347 IRNKRLKAKTVETPFYK 363 >gi|319651520|ref|ZP_08005648.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2] gi|317396835|gb|EFV77545.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2] Length = 367 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 107/315 (33%), Gaps = 51/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G ++ +LQ ++T D+ L A+ +A+ G + L+ KIE+D ++ Sbjct: 52 SHMGEIEVKGTDSLKYLQKMMTNDISKLKNSGAQYTAMCYENGGTVDDLLVYKIEDDHYL 111 Query: 67 LEIDRSKRDSLIDKLLFYK---------------------LRSNV--------------- 90 L ++ S + + L + L V Sbjct: 112 LVVNASNIEKDFNWLQDHAEGNVELKNLSEDMAQLAIQGPLAEKVLQKLAGTNLSDIGFF 171 Query: 91 ----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145 +++ +V + D + ++A + G E + + Sbjct: 172 KFQQDVDLNGKKALVSRTGYTGEDGFEVYCDAQDAVAIWIEILEAGKEEGVLPCGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR + + P I P +A + + + K +IG+EV+ + + RK Sbjct: 232 TLRFEANLALYGQELSPE-ITPLEAGIGF--AVKVNKEADFIGKEVLKNQKENGVPRKLA 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 I +P G P+ + IG + L + + + D + + Sbjct: 289 GIEMIDRGIPRHGYPVYKGEELIGEVTTGTQSPTLKKNIGLVLIKKEHADPGTDLEVEIR 348 Query: 259 VHGVRVKASFPHWYK 273 ++ K + +YK Sbjct: 349 GKRLKAKIAATPFYK 363 >gi|289524103|ref|ZP_06440957.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502759|gb|EFD23923.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 375 Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK A+ F+ ++T DV L S + G ++ LI +E+ F+ Sbjct: 59 SHMGEITVEGKDALKFINYLVTNDVTKLVPGKVMYSPMCYEHGGVVDDLLIYMYDENRFL 118 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L ++ + K + ++ KL F Sbjct: 119 LVVNAANKDKDYQWIVDKSKKFDVKAEDVSDSYAQIAIQGPKAEGILQKLTDVALDEMKF 178 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y + V + + + E F + I D LL + + + + Sbjct: 179 YTFKDRVSVGGVDLLLSRTGYTGEDGFELYLLPGDAGHIWDELL-KAGKEEGLVPAGLGA 237 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + L+K +IG+ + + + + RK Sbjct: 238 RDTLRFEACLPLYGQEL-SEDITPLEAGLGFF--VKLSKEDFIGRASLLEQKEKGLKRKI 294 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 + +P G + + +G + ALA+ ID V+ + + + Sbjct: 295 AGLEMVEKGVPRHGYEVKSQGKSVGVITSGSYAPSLEKYLALALLDIDYVEIGREVHVDI 354 Query: 258 TVHGVRVKASFPHWYK 273 K +YK Sbjct: 355 RGKDRLAKVVETPFYK 370 >gi|254430285|ref|ZP_05043988.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp. PCC 7001] gi|197624738|gb|EDY37297.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp. PCC 7001] Length = 325 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 100/297 (33%), Gaps = 47/297 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFIL 67 + +++ G + FL +A + P + ++P G++ L L+ + + L Sbjct: 20 TLLRLEGTDSRRFLHGQTSAAIELAPPGAWIPTCCISPTGRMRALAEVLV---DGEGAWL 76 Query: 68 EIDRSKRDSLIDKLLFYKLR--SNV---IIEIQPINGVVLSWNQEH-TFSNSSFIDERFS 121 + +++ L L V +E + V+ + + + + Sbjct: 77 VVSAGDGEAVRSALDR-VLFPADQVGLGTLEPARLITVLPPVSPDSGPMAAPAAPLSWGE 135 Query: 122 IADVLLHR-----TWGHNEKIASDIKTY--------HELRINHGIVDPNTDFLPSTIFPH 168 + + R + +++ R+ G+ + + P Sbjct: 136 LGGGVGWRLGASWLLRDGAPLPAELAALPALGDHDQERWRLQQGLPAASAEL-NDDTNPF 194 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPPSGSP 219 + + + +SL+KGCY+GQE ++++ + ++++ +P G+ Sbjct: 195 ELGLA--DRVSLSKGCYVGQETLAKLATYDGVKQQLRRWHWCQRPEGSPAAATVPEPGTV 252 Query: 220 ILT----DDIEIGTLGVVV-----GKKALAIARIDKVDH-AIKKGMALTVHGVRVKA 266 +L D G + + LA+ R ++ A+ G R+ Sbjct: 253 LLHPDNPDGGRAGRVTSALQLDGGDWIGLALVRRQALEAPALLLGPEPGAGLARLSV 309 >gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1] gi|172044257|sp|A4J2F6|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1] Length = 364 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 96/314 (30%), Gaps = 63/314 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +A F+Q ++T D+ L A S + PQG + L+ ++E+ ++ Sbjct: 52 SHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRSNVII 92 L ++ S + + ++ +L V + Sbjct: 112 LVVNASNTDKDFHWIVSQQVPGVEIQNVSEVTCQLALQGPQAEKILQRLTA------VDL 165 Query: 93 E-IQPINGVVLSWNQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASD 140 I+ V + H + + F + T + Sbjct: 166 SHIKSFCFVYGAVEGIHCLISRTGYTGEAGFELYFPASHAERVWQAIMATGATDGLRPVG 225 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR + + I P A + + K ++G+E + + + Sbjct: 226 LGARDTLRFEACLALYGHELT-DDISPLMAGLGWT--VKFNKPEFVGKEPLLKQKEAGTT 282 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254 + + +P G I + E+G + L I D + K Sbjct: 283 YQLVGLEMIDRGIPRQGYAIFKEGQEVGWITSGTFAPTLGKNMGLGYVEIPFAD--VGKE 340 Query: 255 MALTVHGVRVKASF 268 + + V +KA Sbjct: 341 LNIMVRNKPLKARI 354 >gi|229086800|ref|ZP_04218963.1| Aminomethyltransferase [Bacillus cereus Rock3-44] gi|228696521|gb|EEL49343.1| Aminomethyltransferase [Bacillus cereus Rock3-44] Length = 366 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDTKVVNVSSEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL + + Sbjct: 172 KFKNDILVDGTPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGEEDGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKETLKEYKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + K++ +A +D AI + + + Sbjct: 288 VGIEVTGRGIPRTHYPVYIGEEKIGEVTSGTQSPTLNKSIGLALVDVKYAAIDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|254422863|ref|ZP_05036581.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus sp. PCC 7335] gi|196190352|gb|EDX85316.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus sp. PCC 7335] Length = 292 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 71/194 (36%), Gaps = 28/194 (14%) Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFS---IADVLLHRTWGHNEKIASDIKT------ 143 I N S T +S+ D R + + + WG EK + + Sbjct: 89 AIADDNLQQASSGDSGTQESSTPDDIRMACDVELAIPGYTLWGPIEKADATQQAILSTGI 148 Query: 144 -------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LRI G P+ + P +A + + +S KGCYIGQE ++R+ Sbjct: 149 TVGTQAEWESLRIQQGRPTPHKELTDDD-NPLEAGL--WHSVSFEKGCYIGQETIARLNT 205 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIK 252 ++KR + + GS I D +G L + G L R A Sbjct: 206 YKGVKKRLWGLAIDRSVLE-GSDIALDGKIVGKLTSLTNTEAGFFGLGYIRT----KAGG 260 Query: 253 KGMALTVHGVRVKA 266 +G+ + + G + K Sbjct: 261 EGLDVEIAGAKAKV 274 >gi|158319124|ref|YP_001511631.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus oremlandii OhILAs] gi|166989723|sp|A8MEG4|GCST_ALKOO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|158139323|gb|ABW17635.1| glycine cleavage system T protein [Alkaliphilus oremlandii OhILAs] Length = 368 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 99/308 (32%), Gaps = 49/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q ++T DV L + + P G I+ L+ K ++ + Sbjct: 52 SHMGEIEVRGKDAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDDLLVYKFNKEYYY 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L ++ S D + K +V I I V + D S Sbjct: 112 LVVNASNSDKDFAWMNENKGAYDVEIINISDSVSQVAVQGPKAEEIVQELTDTDLSEIPF 171 Query: 123 -----------ADVLLHRT--------------------WGHNEKIASD-------IKTY 144 A+ L+ RT W ++ D + Sbjct: 172 FYFKNDVVINGANCLISRTGYTGEDGFEIYVDNDKVDALWDKIIEVGKDRGLKPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P +A + + L K +IG++ + R + + RK Sbjct: 232 DTLRFEATLPLYGHEI-DKDISPLEAGLGFF--VKLNKENFIGKDALVRQKEEGLKRKVV 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260 + +P G + D IG + L A ID A+ + + V Sbjct: 289 GFEMKENGIPRQGYEVKVGDKVIGVVTTGYNSPTLKKNIGYALIDAEYAALGTPIDIQVR 348 Query: 261 GVRVKASF 268 +KA Sbjct: 349 KKTLKAEV 356 >gi|332977714|gb|EGK14477.1| aminomethyltransferase [Desmospora sp. 8437] Length = 367 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 109/310 (35%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A+ LQ ++T DV L + +A+ P G + LI + E + Sbjct: 53 SHMGEVEVEGAGALDLLQKLMTNDVSKLVDGRIQYTAMCYPDGGTVDDLLIYRKGEGRYF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWN-------QEHTFSNSSFIDE 118 L ++ + D ++ + + ++ +V ++ I G++ Q T ++ S I Sbjct: 113 LVLNAANIDKDVEWIEKH-IQGDVAVKNISAETGLLALQGPLAEQVLQGLTETDLSQIKP 171 Query: 119 -------------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144 A +L R ++ I + Sbjct: 172 FGFQDGVSLGEVKGLVSRTGYTGEDGFEIYLPAQDAPILWKRILEAGKERGVIPCGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + ++I P +A + + KG +IG+EV+++ + RK Sbjct: 232 DTLRFEARLPLYGNEL-SASISPIEAGIGF--AVKPDKGEFIGREVLAKQKEEGAPRKLV 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 + +P S P+ D E+G + LA+ + + + + + + Sbjct: 289 GLEMVGRGIPRSHYPVYVGDAEVGEVTSGTQSPTLKKNVGLALIQAEHAELGREVDVEIR 348 Query: 259 VHGVRVKASF 268 + K Sbjct: 349 GRRIPAKIIK 358 >gi|78183841|ref|YP_376275.1| hypothetical protein Syncc9902_0259 [Synechococcus sp. CC9902] gi|78168135|gb|ABB25232.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 265 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 23/252 (9%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--EEDTFILE 68 +K+ G+ FLQ +ADV P + LT G++ + D +L Sbjct: 13 LLKLEGEGTRNFLQGQTSADVADTPEGNLVQTCWLTATGRLRALLELRLRANGADVLVLA 72 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 D + D+++F R + +QPI + T S + ++D+ D L Sbjct: 73 GDATAVARGFDQVIFPADR----VRLQPIAEQ-RRVQRLSTSSAALWLDD-----DSQLP 122 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 W N ++ K + RI +V + + P + + + +SL+KGCY+GQ Sbjct: 123 PNWTSNP---ANPKQFERWRIEQRLVFGPGEL-NADANPLELGL--SDHVSLSKGCYLGQ 176 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244 E V+++ + ++ + + G + + GT+ V+ G LA+ R Sbjct: 177 ETVAKLANLGGAKQEL-RGWICNQVLSVGDTLRANGERAGTITSVLDTSEGSIGLALVRR 235 Query: 245 DKVDHAIKKGMA 256 + G Sbjct: 236 RHLSAETLDGSD 247 >gi|114567495|ref|YP_754649.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338430|gb|ABI69278.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 366 Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 103/308 (33%), Gaps = 51/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G+ A FLQ +++ D+ + + + + P G ++ L+ K + ++ Sbjct: 51 SHMGEIEVRGEKAEAFLQYLLSNDINKIAPGQVQYNIMCYPDGGVVDDLLVYKYTTEHYL 110 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRS---- 88 L ++ + + ++ KL +L S Sbjct: 111 LVVNAANTDKDFEWIKKNAFPGVEIENLSDDYAQMAIQGPLAEQILQKLTDLELHSIKYY 170 Query: 89 --NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 +EI ++ ++ +I G + + Sbjct: 171 WFQANVEIAGKIAIISRTGYTGEDGFEIYLAPEDAIDVWEAILAAGGEDIAPIGLGARDS 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR + + P I P +A + + + G +IG+E + R + R + + Sbjct: 231 LRFEAKLPLYGQELGPD-ISPLEARLGIF--VKFDCGDFIGREALLRQKESQPPRVQAEL 287 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVH 260 + +P S + + IG L G A LA+A +D+ + + + + Sbjct: 288 LMLERGIPRSHYEVCQEGKVIGQLSS--GGLAPSLEKNLALALVDREYYQPGAEVEVMIR 345 Query: 261 GVRVKASF 268 VKA Sbjct: 346 NKPVKAQI 353 >gi|156839684|ref|XP_001643530.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM 70294] gi|156114145|gb|EDO15672.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM 70294] Length = 502 Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 65/180 (36%), Gaps = 48/180 (26%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNII 200 + R+ +GI+D DF TI+P + D LN ++ KGCY+GQE+ +R+ I+ Sbjct: 317 NEFRSYRLKNGIIDSVRDFRSETIWPLELNFDFFLNSVNPDKGCYLGQEITTRMFSTGIL 376 Query: 201 RKRPMIITGTD-----------------------DLPPSGSPILTD---------DIEIG 228 RKR + + + + + I IG Sbjct: 377 RKRLIPVKLENYQNLKDNEDTATNYYDITLQTPISVKNEATEINNPFSNQAFSRRQRPIG 436 Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALT---------------VHGVRVKASFPHWYK 273 TL G+ +AI R + ++ K L ++V P WY+ Sbjct: 437 TLICNEGENGVAIIRTEYLNSIFKNQGNLNNNMFIRIESKISDSETKTIKVIPRKPFWYE 496 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 58/143 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------- 38 SN+++IK+ G A FL ++TA ++ T+ Sbjct: 54 SNKAYIKIIGPEAPKFLNGLVTAKLLPKFVKKNLTTISPNSDTLKELGNGEIVRFDESHD 113 Query: 39 ------------------ARGSAILTPQGKILLYFLISKI------------EEDTFILE 68 + +L +GK++ +I ++LE Sbjct: 114 NWGIYNEVSANGPYISRFGVYTGLLNSKGKLITDTIIYPTPLIFDKTPVGGKNYPIYLLE 173 Query: 69 IDRSKRDSLIDKLLFYKLRSNVI 91 D S D +++ +KL S + Sbjct: 174 FDNSIVDDVLEIFDIHKLNSKIK 196 >gi|121533521|ref|ZP_01665349.1| glycine cleavage system T protein [Thermosinus carboxydivorans Nor1] gi|121308080|gb|EAX48994.1| glycine cleavage system T protein [Thermosinus carboxydivorans Nor1] Length = 365 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A F+ ++T D L + + G ++ L+ ++ E ++ Sbjct: 51 SHMGEVSVSGPDATDFVNRLVTNDASRLAVNQVMYTPMCYDHGGVVDDLLVYRLGEQEYL 110 Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83 L I+ + + ++++ +L + Sbjct: 111 LVINAANIDKDYAWMVQHAANYDVTVKNISDVTAELALQGPRAEAILQRLTDEDLSTIKY 170 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y LR +V ++ + E F +E + L+ + + + Sbjct: 171 YWLRRHVRVDGIDCLISRTGYTGEDGFEIYCAPEEAGRLWKRLME-VGKPLGLVPAGLGA 229 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G+ + +I P +A + + + K +IG E + ++ I RK Sbjct: 230 RDTLRFEAGLPLYGHEL-SESITPLEAGLGVF--VKFDKQSFIGYEALLAQKNAGIRRKI 286 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 I + +G IGT+ ALAI + + + + Sbjct: 287 VGIEMVGRGIARAGYTCHAAGRVIGTVTSGTYAPTLDKNLALAILETEFSAPGTEVAVEI 346 Query: 258 TVHGVRVKASFPHWYK 273 V K +YK Sbjct: 347 RGKLVEAKVVTKPFYK 362 >gi|229916267|ref|YP_002884913.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b] gi|229467696|gb|ACQ69468.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b] Length = 362 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 103/302 (34%), Gaps = 46/302 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A+ +Q ++T D+ + A+ + + G ++ L+ +++ED + Sbjct: 57 SHMGEIRIEGPDALEQVQNLVTNDISKIKVGQAQYNLLCLEDGGVVDDLLVYRLDEDAYW 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSF------ 115 L ++ S + + Y V+ G + T +N + Sbjct: 117 LVVNASNIEKDEAHIRRYVKGDVVVTNESDEYGQIAIQGPNAQSVLQTITNVALDEIGFF 176 Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRIN 150 I R + E I++ + LR Sbjct: 177 KFMNGDVAGVPSIISRSGYTGEDGFEIYARAEAISAIWEALEAEGVTPCGLGARDTLRFE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + ++ P +A ++ + ++G+E + Q NI + + Sbjct: 237 ACLPLYGHEL-DESVTPFEANLNFAVKLDTD---FVGKEALV-TQKENIPNRLIGLKLLG 291 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + G+ + D IG + +++A AR+D + ++ + + G +++A Sbjct: 292 RGIARQGAQVELDGNVIGVVTTGTMPPTVNESIAWARVD-ARYKDEERFVIDIRGKKIEA 350 Query: 267 SF 268 Sbjct: 351 ER 352 >gi|317128398|ref|YP_004094680.1| glycine cleavage system protein T [Bacillus cellulosilyticus DSM 2522] gi|315473346|gb|ADU29949.1| glycine cleavage system T protein [Bacillus cellulosilyticus DSM 2522] Length = 363 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 110/311 (35%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G+ A+PFLQ ++T DV L + +A+ G + ++ K E++ ++ Sbjct: 51 SHMGEIEVKGQEALPFLQKMLTNDVSKLKDMACQYNAMCYENGGTVDDLVLYKREDNHYL 110 Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84 L ++ S +S+ KL F+ Sbjct: 111 LVVNASNIEKDYEWLKQHATEKVEVINVSNQYAQIAVQGPLAESITQKLTKEDLSTITFF 170 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKT 143 K R V++ + + + E F D+ S+ + LL G E I + Sbjct: 171 KFREGVVVANKDVLISRTGYTGEDGFEIYCRPDDAISLWNALL--DAGKEEGIQPCGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR + + P +A + + K ++G+ V+ + + RK Sbjct: 229 RDTLRFEARLPLYGQELSRDIS-PIEAGIGFAVKVD-KKEDFLGKVVLKQQKEDGPERKL 286 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P + + D +IG + LAI IDK A+ + + Sbjct: 287 VGIEMIDKGIPRTDYEVFKDGEKIGFVTTGTQSPTLKKNVGLAI--IDKKFQAVDTVVEV 344 Query: 258 TVHGVRVKASF 268 V R+KA Sbjct: 345 QVRKRRLKAKV 355 >gi|323304291|gb|EGA58065.1| Iba57p [Saccharomyces cerevisiae FostersB] Length = 497 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 49/176 (27%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAEHEPTLNPFTNKPPERTK--RKQRPA 434 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273 G L G +A+ R + A + +++ P W +K Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKXDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQIPNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHXNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|284047088|ref|YP_003397428.1| glycine cleavage T protein (aminomethyl transferase) [Conexibacter woesei DSM 14684] gi|283951309|gb|ADB54053.1| glycine cleavage T protein (aminomethyl transferase) [Conexibacter woesei DSM 14684] Length = 311 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 105/301 (34%), Gaps = 41/301 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A +LQA ++AD+ + +A+LTP+G++ + + E ++ Sbjct: 14 SDAGKLSVTGPDAFDYLQAHLSADLRGVAVGAGSATALLTPRGQVRALARVLRFER-GWL 72 Query: 67 LEIDRSKRDSLID---------KLLFYKLRS-NVIIEIQPINGVV-LSWNQEHTFSNSSF 115 L +R+ + L ++ +KL ++ + + V L Q + Sbjct: 73 LHCERAALEGLFRGLWNGRIGWRVELHKLTLQQALVTVLGDDAVARLGLAQALGAGEHAH 132 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK----------------------TYHELRINHGI 153 + R+W + +A + R+ G Sbjct: 133 AAAALDGVPLRAVRSWAGVDLVARADHADALAAAIAARAGAGAAPLERCDWDWRRVIAGR 192 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D + T+ P + + ++ KG Y G + V R Q + +R + L Sbjct: 193 LAYGVD-VAETMLPAELALSP-PLVATEKGLYPGMQTVLRQQRSGTVHRRICRLHAPV-L 249 Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKALAIARI--DKVDHAIKKGMALTVHGVRVKASFP 269 G +L D GT+ V LA+ R+ D + + TV + + P Sbjct: 250 LAPGDELLGGADGPSAGTITSGVCFDGLALVRLRGDGSAPLVHRPSGATVQARPLDSGAP 309 Query: 270 H 270 Sbjct: 310 S 310 >gi|76800870|ref|YP_325878.1| aminomethyltransferase, glycin cleavage system T protein [Natronomonas pharaonis DSM 2160] gi|76556735|emb|CAI48309.1| homolog to aminomethyltransferase, glycin cleavage system T protein [Natronomonas pharaonis DSM 2160] Length = 360 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 103/316 (32%), Gaps = 58/316 (18%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I V G + F+ +T V + +L PQG I I E + Sbjct: 48 YGIIDVGGDDRLEFVDNAVTNRVPE-TDGAGSYALLLDPQGGIETELYIYNAGE-RLLCF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQ-PINGVVLSWNQEHTFSNSS------------ 114 + + + + ++ K V I + GV + T +S Sbjct: 106 VPPGRAEPVAEEWA-DKTFIQDVDINVATDDYGVFGVHGPKATEKVASVLTGPTTPEEPL 164 Query: 115 -FIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPSTIF 166 F+ R + RT G + A D + +NHG+ + Sbjct: 165 EFVRGRVGDWGTTVIRTDGLTGEEGYEIVCAADDAANVFDALVNHGLNAAPFGYRTLEYL 224 Query: 167 PHDAL---------------MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 +A + L N + KGCY+GQEVVS+I+++ + + I Sbjct: 225 WLEAGTPLFETELEGTVPNVLGLRNALDFEKGCYVGQEVVSKIENQGRPSRELVGIKLDA 284 Query: 212 DLPPSGSPILTDDIEIGTLGVV------VGKKALAI-----------ARIDKVDHAIKKG 254 + P +G+ + D +G + G ALA+ RID D A ++ Sbjct: 285 E-PTAGAAVFDGDSHVGEVTRGDYSPALDGAIALALVEYGLESDDLTVRIDSDDVAAERV 343 Query: 255 MALTVHGVRVKASFPH 270 V G A P Sbjct: 344 QLPFVDGSARSARLPS 359 >gi|323308509|gb|EGA61754.1| Iba57p [Saccharomyces cerevisiae FostersO] Length = 497 Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 49/176 (27%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAEXEPTLNPFTNKPPERTK--RKQRPA 434 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273 G L G +A+ R + A + +++ P W +K Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKXENIKITPQKPFWFSDWK 490 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKXDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQIPNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL S + E + + +W+ E F N Sbjct: 170 LLELHXNVVDKILHVLQTHKLASKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|261407445|ref|YP_003243686.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10] gi|261283908|gb|ACX65879.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10] Length = 370 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ A F+Q + T DV + A+ + + +G + L+ K+ D F+ Sbjct: 53 SHMGEFMISGQDAEAFIQNMTTNDVTRITVGQAQYTLMCNDKGGTVDDLLVYKLSSDRFM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112 L ++ S D + L + + +V I +++ + Sbjct: 113 LVVNASNIDKDLQWLHEH-VTGDVAIRNVSAETALIALQGPAAENILSKATSEMLGDIPS 171 Query: 113 SSFI-DERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 FI + + LL RT E I + + Sbjct: 172 FHFIQNAQVCGHAALLSRTGYTGEDGFEIYCSAADAPDIWRGLLTAGKDHGLIPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + STI P +A + + L G +IG+E + + + + RK Sbjct: 232 DTLRFEAKLPLYGQEL-SSTISPLEASLGYF--VKLDSGDFIGREALQQQKQDGVPRKLV 288 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P S P+L IG + K+ L +A I+ ++ + + + Sbjct: 289 GIELIDRGIPRSHYPVLNGNGEPIGEVTSGTQSPSLKRNLGLALIETPYASLDSEVWVEI 348 Query: 260 HGVRVKASF 268 G ++KA Sbjct: 349 RGKKLKAKV 357 >gi|304406524|ref|ZP_07388180.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus YK9] gi|304344582|gb|EFM10420.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus YK9] Length = 376 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 108/315 (34%), Gaps = 59/315 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A FLQ + T DV L A+ + + +G ++ L+ ++ D ++ Sbjct: 53 SHMGRLTVTGLFAEAFLQRLTTNDVSLLKDGRAQYTLMCNNEGGVIDDLLVYRLSADQYM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIA-- 123 L ++ S +++ L + + ++ I+ +L+ + S +D A Sbjct: 113 LVVNASNTTQVLEWLREHLI-GDITIDNMTERTALLALQGPDAAAILSDALDAAPGAAWN 171 Query: 124 ----------------DVLLHRTWGHNE---------------------------KIASD 140 L+ RT E +A+ Sbjct: 172 KLTSFQFMQSATVCGVPALVSRTGYTGEDGFELYAAAADAEALWNGLLQAGERYGAVAAG 231 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ + + +I P +A + + KG +IG+ V+ + Sbjct: 232 LGARDTLRLEARLPLHGHEL-SDSITPVEAGLRAF--VKPDKGDFIGRSVLLKQLTEGAP 288 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKK 253 R+ I +P +G I D +++G + LA+ + D A+ Sbjct: 289 RRLVGIELAERSIPRAGYAIFAADGVQVGYVTSGTHAPTLKRNIGLALLQADYA--ALGT 346 Query: 254 GMALTVHGVRVKASF 268 + + + G AS Sbjct: 347 PLLVDIRGASCPASV 361 >gi|89099220|ref|ZP_01172098.1| aminomethyltransferase [Bacillus sp. NRRL B-14911] gi|89086066|gb|EAR65189.1| aminomethyltransferase [Bacillus sp. NRRL B-14911] Length = 368 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 112/312 (35%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G+++ FLQ ++T D+ L A+ +A+ G + L+ K E+D ++ Sbjct: 52 SHMGEIEVKGQASQDFLQKMMTNDISKLKSGGAQYTAMCYESGGTVDDLLVYKFEDDHYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKLL---------F 83 L ++ + + ++ KL F Sbjct: 112 LVVNAANIEKDYQWLEDHLIDGADIRNLSDQTAQLALQGPAAEGILQKLAGEKDLSEIGF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 +K S+V + + + E F D+ SI + +L + + Sbjct: 172 FKFSSDVDLNGKKALVSRTGYTGEDGFEIYCHSDDASSIWNDILE-AGKEEGVLPCGLGC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR + + P + P +A + + + K +IG+ V+ + + + RK Sbjct: 231 RDTLRFEANLALYGQELSPD-VTPLEAGIGF--AVKINKEADFIGKPVLKQQKENGVPRK 287 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 + +P G P+L D ++G + LA+ + + + + Sbjct: 288 LVGLEMIDRGIPRHGYPVLADGEQVGEVTTGTQSPTLKKNIGLALIKTQYAE--LGNEVE 345 Query: 257 LTVHGVRVKASF 268 + + G R+KA Sbjct: 346 VEIRGKRLKAVI 357 >gi|311030892|ref|ZP_07708982.1| glycine cleavage system aminomethyltransferase T [Bacillus sp. m3-13] Length = 367 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 106/316 (33%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK ++ +LQ ++T DV L A+ +A+ P G + L+ K ++ ++ Sbjct: 52 SHMGEIEVKGKDSLAYLQKMMTNDVSKLKDGGAQYTAMCYPDGGTVDDLLVYKKADEDYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84 L ++ S + ++ KL F+ Sbjct: 112 LVVNASNIEKDFDWLKSHAIEEVEVTNISESIAQLAIQGPVAEKVLQKLTSTDLSEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K + NV I + E F ++ + + LL + + + + Sbjct: 172 KFKENVEINGVSALVSRTGYTGEDGFEIYCQQEDAVKLWNTLLE-AGKEDGLVPCGLGSR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+EV+ + R Sbjct: 231 DTLRFEAKLALYGQEL-SKDITPIEAGIGF--AVKTNKEEDFFGKEVLKEQKENGAPRSI 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + + +IG + LA+ + + + + + + Sbjct: 288 VGIEMIDKGIPRHGYEVFVGEEQIGEVTTGTQSPTLKKNVGLALLKKEFTEFDTEVEVQV 347 Query: 258 TVHGVRVKASFPHWYK 273 ++ K +Y+ Sbjct: 348 RKKRLKAKVVKAPFYQ 363 >gi|269926601|ref|YP_003323224.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC BAA-798] gi|269790261|gb|ACZ42402.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC BAA-798] Length = 371 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 45/269 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++ G++A+ FL +T + L A+ + I G + ++ +++ED + Sbjct: 52 LSHMGEFEITGENAVHFLNYCLTNNAAKLKIGQAQYTLIPYTDGSVADDAILYRLDEDKY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ---EHTFSNSSFIDER-- 119 +L ++ + ++ L KL V +E +++ E + +D R Sbjct: 112 LLVVNAANTQKDLEWLSHQKLGFEKVNLEDISDRTALIAIQGPKSEGILQKLTSVDLRNL 171 Query: 120 ---------FSIADVLLHRTWGHNEKIASDIKTYHE------------------------ 146 + D L+ RT E + + Sbjct: 172 KYYHITKGEVTGIDALIARTGYTGEDGFEIFLPWDKATVVWRSLLDAGKDSGLKPAGLGS 231 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G+ + + P++A +D + L KG ++G+E + R + RK Sbjct: 232 RDTLRIEAGMPLYGHEL-SEQVNPYEAGLDW--AVKLDKGDFVGREALEREKQLGPARKL 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232 +P + PI +IG + Sbjct: 289 VGFTLLEMGVPRAEQPIQKQGRQIGFVTS 317 >gi|319948556|ref|ZP_08022686.1| glycine cleavage system aminomethyltransferase T [Dietzia cinnamea P4] gi|319437780|gb|EFV92770.1| glycine cleavage system aminomethyltransferase T [Dietzia cinnamea P4] Length = 370 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 102/313 (32%), Gaps = 53/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + T D+ + A+ + G ++ + ++ + Sbjct: 55 SHLGKALVSGPGAAEFVNSCFTNDLDRISAGSAQYTLCCDESGGVVDDLIAYRVSDSEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK------------LRSNVIIEIQ-PINGVVLSWNQEHTFSNS 113 L + + ++ +L RS +I +Q P+ G VL+ T + Sbjct: 115 LIPNAANTAEVVRRLQAAAAERAPEVTVTDEHRSRAVIAVQGPLAGEVLTAVGLPTDLDY 174 Query: 114 -SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------------------- 146 +F+D F V + RT E + + E Sbjct: 175 MAFVDADFGGRSVRICRTGYTGEYGFEVLPAWDEAGEVWDALAEQVLAREGALCGLGARD 234 Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR G + + P +A I K + G+E + R + R+ Sbjct: 235 SLRTEAGYPLHGNELSVD-LSPLEARCAW--AIGWDKPSFWGREELLRQKEAGPARRMYA 291 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH- 260 + + +G + D ++G +A+A ID +D +KKG + V Sbjct: 292 LQVTGRGVLRAGQTVRADGRDVGVTSSGTFSPTLKTGIALAFID-LDAGLKKGDEVIVDV 350 Query: 261 ---GVRVKASFPH 270 V + + P Sbjct: 351 RGREVPCRLAVPP 363 >gi|304380875|ref|ZP_07363535.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340602|gb|EFM06536.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 363 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-TK----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +K +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFVSKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMDRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|229031877|ref|ZP_04187865.1| Aminomethyltransferase [Bacillus cereus AH1271] gi|228729495|gb|EEL80484.1| Aminomethyltransferase [Bacillus cereus AH1271] Length = 366 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|258423190|ref|ZP_05686083.1| glycine cleavage system T protein [Staphylococcus aureus A9635] gi|257846640|gb|EEV70661.1| glycine cleavage system T protein [Staphylococcus aureus A9635] Length = 363 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQDVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGKVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|323702144|ref|ZP_08113811.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM 574] gi|323532831|gb|EGB22703.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM 574] Length = 364 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 99/306 (32%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A +Q+IIT DV L A + + P G + L+ ++EE+ ++ Sbjct: 52 SHMGEIQITGPGARELIQSIITNDVNRLTPGAALYTPMCHPTGGTVDDLLVYQLEENQYL 111 Query: 67 LEIDRSKRDSLIDKLLFY-----------------------------KLRS------N-- 89 L ++ + + + + Y KL S Sbjct: 112 LVVNAANIEKDYNWVKVYANEGVEVKNVSDVTCQLALQGPRAIKILQKLTSVDLNEIKHF 171 Query: 90 --VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHE 146 V ++ IN ++ + + G E I + Sbjct: 172 HFVYGLVEGINCLISRTGYTGEDGFELYFPAEHARLLWRAILAAGQGEGIKPVGLGARDT 231 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR + + ++ P A + + KG ++G+E + + + K + Sbjct: 232 LRFEACLALYGHELT-DSVSPVMAGLGWT--VKFNKGDFVGREALLQQKETGPSHKLVGL 288 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262 +P G I D E+G + K L + + A+ + + V G Sbjct: 289 EMIDRGIPRQGYTISKDGQEVGWITSGTFAPSIGKNLGLGYVAAQWVAVGTELDIMVRGK 348 Query: 263 RVKASF 268 +KA Sbjct: 349 ALKAKI 354 >gi|282916807|ref|ZP_06324565.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus D139] gi|283770613|ref|ZP_06343505.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19] gi|282319294|gb|EFB49646.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus D139] gi|283460760|gb|EFC07850.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19] gi|298694819|gb|ADI98041.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ED133] Length = 363 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQDVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|15924527|ref|NP_372061.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu50] gi|15927117|ref|NP_374650.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus N315] gi|21283218|ref|NP_646306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MW2] gi|49486373|ref|YP_043594.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MSSA476] gi|57651931|ref|YP_186435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus COL] gi|87160187|ref|YP_494193.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195343|ref|YP_500147.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268021|ref|YP_001246964.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus JH9] gi|150394088|ref|YP_001316763.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus JH1] gi|151221653|ref|YP_001332475.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. Newman] gi|156979855|ref|YP_001442114.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu3] gi|161509765|ref|YP_001575424.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253314906|ref|ZP_04838119.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732190|ref|ZP_04866355.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733214|ref|ZP_04867379.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus TCH130] gi|255006323|ref|ZP_05144924.2| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793613|ref|ZP_05642592.1| glycine cleavage system T protein [Staphylococcus aureus A9781] gi|258411087|ref|ZP_05681367.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9763] gi|258420109|ref|ZP_05683064.1| glycine cleavage system T protein [Staphylococcus aureus A9719] gi|258437369|ref|ZP_05689353.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9299] gi|258443575|ref|ZP_05691914.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A8115] gi|258446782|ref|ZP_05694936.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6300] gi|258448696|ref|ZP_05696808.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6224] gi|258451194|ref|ZP_05699229.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A5948] gi|258453513|ref|ZP_05701491.1| glycine cleavage system T protein [Staphylococcus aureus A5937] gi|262049119|ref|ZP_06021996.1| aminomethyltransferase [Staphylococcus aureus D30] gi|262051200|ref|ZP_06023424.1| aminomethyltransferase [Staphylococcus aureus 930918-3] gi|269203166|ref|YP_003282435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus ED98] gi|282893038|ref|ZP_06301272.1| glycine cleavage system T protein [Staphylococcus aureus A8117] gi|282924785|ref|ZP_06332452.1| glycine cleavage system T protein [Staphylococcus aureus A9765] gi|282929008|ref|ZP_06336595.1| glycine cleavage system T protein [Staphylococcus aureus A10102] gi|284024596|ref|ZP_06378994.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 132] gi|294848567|ref|ZP_06789313.1| glycine cleavage system T protein [Staphylococcus aureus A9754] gi|295406659|ref|ZP_06816464.1| glycine cleavage system T protein [Staphylococcus aureus A8819] gi|296275107|ref|ZP_06857614.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MR1] gi|297207744|ref|ZP_06924179.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245758|ref|ZP_06929623.1| glycine cleavage system T protein [Staphylococcus aureus A8796] gi|300911825|ref|ZP_07129268.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|54037178|sp|P64225|GCST_STAAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54037179|sp|P64226|GCST_STAAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54041304|sp|P64224|GCST_STAAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56748970|sp|Q6G929|GCST_STAAS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|61213198|sp|Q5HFM2|GCST_STAAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122539427|sp|Q2FY33|GCST_STAA8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123485681|sp|Q2FGI5|GCST_STAA3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221573|sp|A7X2S3|GCST_STAA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|172048902|sp|A6QH81|GCST_STAAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039476|sp|A6U208|GCST_STAA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039477|sp|A5IT65|GCST_STAA9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039478|sp|A8Z476|GCST_STAAT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|13701335|dbj|BAB42629.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus N315] gi|14247308|dbj|BAB57699.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu50] gi|21204658|dbj|BAB95354.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MW2] gi|49244816|emb|CAG43270.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|57286117|gb|AAW38211.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus COL] gi|87126161|gb|ABD20675.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202901|gb|ABD30711.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741090|gb|ABQ49388.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus JH9] gi|149946540|gb|ABR52476.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus JH1] gi|150374453|dbj|BAF67713.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|156721990|dbj|BAF78407.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu3] gi|160368574|gb|ABX29545.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723979|gb|EES92708.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728754|gb|EES97483.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus TCH130] gi|257787585|gb|EEV25925.1| glycine cleavage system T protein [Staphylococcus aureus A9781] gi|257840237|gb|EEV64701.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9763] gi|257843820|gb|EEV68214.1| glycine cleavage system T protein [Staphylococcus aureus A9719] gi|257848574|gb|EEV72562.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A9299] gi|257850981|gb|EEV74924.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A8115] gi|257854357|gb|EEV77306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6300] gi|257857974|gb|EEV80863.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A6224] gi|257861249|gb|EEV84062.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus A5948] gi|257864244|gb|EEV86994.1| glycine cleavage system T protein [Staphylococcus aureus A5937] gi|259160837|gb|EEW45857.1| aminomethyltransferase [Staphylococcus aureus 930918-3] gi|259162788|gb|EEW47353.1| aminomethyltransferase [Staphylococcus aureus D30] gi|262075456|gb|ACY11429.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus ED98] gi|282589415|gb|EFB94506.1| glycine cleavage system T protein [Staphylococcus aureus A10102] gi|282592792|gb|EFB97798.1| glycine cleavage system T protein [Staphylococcus aureus A9765] gi|282764356|gb|EFC04482.1| glycine cleavage system T protein [Staphylococcus aureus A8117] gi|283470815|emb|CAQ50026.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ST398] gi|285817219|gb|ADC37706.1| Aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus 04-02981] gi|294824593|gb|EFG41016.1| glycine cleavage system T protein [Staphylococcus aureus A9754] gi|294968406|gb|EFG44430.1| glycine cleavage system T protein [Staphylococcus aureus A8819] gi|296887761|gb|EFH26659.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177409|gb|EFH36661.1| glycine cleavage system T protein [Staphylococcus aureus A8796] gi|300886071|gb|EFK81273.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|312829926|emb|CBX34768.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129814|gb|EFT85804.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS03] gi|315198769|gb|EFU29097.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS01] gi|320140578|gb|EFW32432.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144115|gb|EFW35884.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323440434|gb|EGA98146.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus O11] gi|323443208|gb|EGB00826.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus O46] gi|329727485|gb|EGG63941.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21172] gi|329728484|gb|EGG64921.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21189] gi|329730824|gb|EGG67202.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21193] Length = 363 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|87300708|ref|ZP_01083550.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701] gi|87284579|gb|EAQ76531.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701] Length = 296 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 100/293 (34%), Gaps = 46/293 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFIL 67 S I++ G ++ FL + D+ + LTP ++ L L+ + L Sbjct: 2 SLIRLDGPDSLRFLHGQSSQDLERAQPGQCLATCCLTPTARVRGLAEVLV---DAKGARL 58 Query: 68 EIDRSKRDSLIDKLLFYKLR--SNVIIEIQPINGVVLSWNQEHTFSNSS----FIDERFS 121 I + L L V + + G ++ + + R Sbjct: 59 VITAGDGAVIHQALDR-VLFPADQVTLGPL-LAGTLIILEGAGAMAEPAMGWQLPGHRLV 116 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 + D I+ H R++ G + + P + + + +SL+ Sbjct: 117 LRDGECLPAELEAIPALGPIEAEHW-RLSQGRPLAPNEI-SDEVNPFELGLA--DRVSLS 172 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE---IGTLGVVVGKK- 237 KGCY+GQE ++++ + ++++ + P + D++ +G + G + Sbjct: 173 KGCYVGQETLAKLATYDGVKQQLRRWCWAEPAPTAARADTASDVQRPVVGAVLRTPGGER 232 Query: 238 ---------------------ALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ R A+++ + +T G+ ++ S P Sbjct: 233 AGRITSSLRLNAGADGSSVWLGLALVR----RQALEEPLLVTGEGITLEISIP 281 >gi|213417502|ref|ZP_03350644.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 95 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EEDTFILEIDRSKRDSLI 78 + +E RS R++ + Sbjct: 79 RDGFAWIE-RRSVREAQL 95 >gi|229019448|ref|ZP_04176270.1| Aminomethyltransferase [Bacillus cereus AH1273] gi|229025690|ref|ZP_04182095.1| Aminomethyltransferase [Bacillus cereus AH1272] gi|229075932|ref|ZP_04208908.1| Aminomethyltransferase [Bacillus cereus Rock4-18] gi|229098699|ref|ZP_04229639.1| Aminomethyltransferase [Bacillus cereus Rock3-29] gi|229104856|ref|ZP_04235516.1| Aminomethyltransferase [Bacillus cereus Rock3-28] gi|229117724|ref|ZP_04247093.1| Aminomethyltransferase [Bacillus cereus Rock1-3] gi|228665701|gb|EEL21174.1| Aminomethyltransferase [Bacillus cereus Rock1-3] gi|228678573|gb|EEL32790.1| Aminomethyltransferase [Bacillus cereus Rock3-28] gi|228684778|gb|EEL38716.1| Aminomethyltransferase [Bacillus cereus Rock3-29] gi|228707247|gb|EEL59444.1| Aminomethyltransferase [Bacillus cereus Rock4-18] gi|228735629|gb|EEL86219.1| Aminomethyltransferase [Bacillus cereus AH1272] gi|228741860|gb|EEL92038.1| Aminomethyltransferase [Bacillus cereus AH1273] Length = 366 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFVGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|82751141|ref|YP_416882.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus RF122] gi|123727409|sp|Q2YSZ2|GCST_STAAB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|82656672|emb|CAI81098.1| aminomethyltransferase [Staphylococcus aureus RF122] Length = 363 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G ++ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGVIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFAANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|49483786|ref|YP_041010.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus MRSA252] gi|257425662|ref|ZP_05602086.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428323|ref|ZP_05604721.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430960|ref|ZP_05607340.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 68-397] gi|257433649|ref|ZP_05610007.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus E1410] gi|257436562|ref|ZP_05612606.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M876] gi|282904119|ref|ZP_06312007.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C160] gi|282905946|ref|ZP_06313801.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282911175|ref|ZP_06318977.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914344|ref|ZP_06322130.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M899] gi|282919313|ref|ZP_06327048.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C427] gi|282924638|ref|ZP_06332306.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C101] gi|283958301|ref|ZP_06375752.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293503418|ref|ZP_06667265.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510435|ref|ZP_06669141.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M809] gi|293530975|ref|ZP_06671657.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M1015] gi|295428115|ref|ZP_06820747.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590919|ref|ZP_06949557.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|56749024|sp|Q6GGG2|GCST_STAAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|49241915|emb|CAG40609.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271356|gb|EEV03502.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275164|gb|EEV06651.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278390|gb|EEV09026.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus 68-397] gi|257281742|gb|EEV11879.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus E1410] gi|257283913|gb|EEV14036.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M876] gi|282313473|gb|EFB43868.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C101] gi|282317123|gb|EFB47497.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C427] gi|282321525|gb|EFB51850.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M899] gi|282324870|gb|EFB55180.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282331238|gb|EFB60752.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595737|gb|EFC00701.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus C160] gi|283790450|gb|EFC29267.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920243|gb|EFD97309.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M1015] gi|291095084|gb|EFE25349.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466799|gb|EFF09319.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus M809] gi|295128473|gb|EFG58107.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575805|gb|EFH94521.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|312437995|gb|ADQ77066.1| glycine cleavage system T protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195438|gb|EFU25825.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus CGS00] Length = 363 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFGAIVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|302333213|gb|ADL23406.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus JKD6159] Length = 363 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNRYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYKVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|150864230|ref|XP_001382966.2| hypothetical protein PICST_40677 [Scheffersomyces stipitis CBS 6054] gi|158513692|sp|A3LNW4|CAF17_PICST RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|149385486|gb|ABN64937.2| CCR4 transcriptional complex component [Scheffersomyces stipitis CBS 6054] Length = 469 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 40/80 (50%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + R +G+ + + T+ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 269 NMRRNVNGLFEGQDADIDQTLLPFECNLDYTNGLSLDKGCYVGQELTIRTYNNGVIRKRI 328 Query: 205 MIITGTDDLPPSGSPILTDD 224 M + ++ + I Sbjct: 329 MPVQFFENNEETVDEISNQG 348 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 57/142 (40%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29 ++ I+V GK A FL +IT+ Sbjct: 12 SKGIIQVVGKDATKFLNGLITSRMLPNVVKKKQHTISENENRHANLSEIIDINNNWGLMH 71 Query: 30 -DVLTLPYKIARG-----SAILTPQGKILLYFLISKIE-------------EDTFILEID 70 D+ I G S L +G++ + + F++E+D Sbjct: 72 GDIYDPEENIFIGRDGLNSMFLNSKGRVTADCFLYSFPFHNSKGSFEEVLKKPNFLIEVD 131 Query: 71 RSKRDSLIDKLLFYKLRSNVII 92 + L +KL + V I Sbjct: 132 SRIIPEMESLLRIHKLSAKVKI 153 >gi|170760490|ref|YP_001786048.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum A3 str. Loch Maree] gi|238688514|sp|B1KWD5|GCST_CLOBM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169407479|gb|ACA55890.1| glycine cleavage system T protein [Clostridium botulinum A3 str. Loch Maree] Length = 370 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 56/303 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118 Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90 + ++ K + F+KLR +V Sbjct: 119 KDKDVKWIMDHKGDFDVEIADVSDSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDV 178 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147 +++ + + E F I + A L H ++ + + L Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFE 292 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 293 LIDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352 Query: 264 VKA 266 +KA Sbjct: 353 LKA 355 >gi|317407096|gb|EFV87104.1| hypothetical protein HMPREF0005_05798 [Achromobacter xylosoxidans C54] Length = 102 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 5/86 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 L + + G A+ FL +T DV LP AR + T +G++L ++ + Sbjct: 17 QCAPLEDFAVFGASGADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRGA 76 Query: 62 EDT-----FILEIDRSKRDSLIDKLL 82 + + + +L+ +L Sbjct: 77 DPAEDAPRLYGLVRQDLAAALVKRLS 102 >gi|229163174|ref|ZP_04291129.1| Aminomethyltransferase [Bacillus cereus R309803] gi|228620237|gb|EEK77108.1| Aminomethyltransferase [Bacillus cereus R309803] Length = 366 Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|221140043|ref|ZP_03564536.1| glycine cleavage system aminomethyltransferase T [Staphylococcus aureus subsp. aureus str. JKD6009] gi|269941027|emb|CBI49411.1| putative aminomethyltransferase [Staphylococcus aureus subsp. aureus TW20] gi|302751368|gb|ADL65545.1| aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329314214|gb|AEB88627.1| Aminomethyltransferase [Staphylococcus aureus subsp. aureus T0131] Length = 363 Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++ Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + +L +K +E+Q + G + + + +DE + Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170 Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146 ++ EKI + Y Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-TK----GCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +K +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFVSKPLIDADFIGKSVLKDQKENGAPR 283 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G ++ D IG + K++A+A I + + + + + Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343 Query: 257 LTVHGVRVKASF 268 + V ++KA Sbjct: 344 VQVRKRQLKAKI 355 >gi|329948165|ref|ZP_08295037.1| glycine cleavage T-protein barrel domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328522898|gb|EGF50003.1| glycine cleavage T-protein barrel domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 424 Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 18/184 (9%) Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 V G+ E + + R A V G + ++A + + LRI Sbjct: 205 VEGGTSYDVGLERPHLGEGYRAGFILVPARCVGAVVRTFLAVGSDRRLAGAL-AWEALRI 263 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + + PH+ +D L + LTKGCY GQE ++R + +R ++ Sbjct: 264 EAGRPRRAHE-ADARAIPHE--LDWLRTAVHLTKGCYPGQETIARTLNLGRPPRRLAVLQ 320 Query: 209 GT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVH 260 DLP G+ + + +GT+ V G ALA+ R A+ G LTV Sbjct: 321 LDGLGGDLPQPGAVVRMGERTVGTVTSVARHHELGPIALALLR-----RAVPAGEQLTVE 375 Query: 261 GVRV 264 V Sbjct: 376 ITEV 379 Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 13/172 (7%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67 + + V G + +L + + + L + +L QG I L + + T L Sbjct: 49 RDVVTVTGPDRLSWLTTLSSQVLTALEPGDGGAETLLLDAQGHITH-ALAALDDGRTLWL 107 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 + L L + V + +P + + + + D +D Sbjct: 108 VTEAGGGADLAAFLDSMRFMLRVEVTERPDVQALGALREGLDVLAQAARDTSVDSSDTSD 167 Query: 128 HRTWGHNEKIASDIKTYHELRIN-----------HGIVDPNTDFLPSTIFPH 168 ++ +D + G+V+ T + PH Sbjct: 168 AQSDAAGTAGTTDTAERTDAEAQGSLIGLWRDPWPGVVEGGTSYDVGLERPH 219 >gi|323154590|gb|EFZ40789.1| tRNA-modifying protein ygfZ [Escherichia coli EPECa14] Length = 220 Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 12/190 (6%) Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +++ +L + + + + L F +L S ++ L W + D Sbjct: 3 IAPDDERVLLGVAGFQARAALANL-FSELPSKEK-QVVKEGATTLLWFEHPAERFLIVTD 60 Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 E + A++L + G E ++ + + L I G + P + L G Sbjct: 61 E--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPVIDA-ANSGQFIPQATNLQALGG 115 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGK 236 IS KGCY GQE+V+R + R ++ ++ G+ LP +G + ++++G G Sbjct: 116 ISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDL---ELKMGENWRRTGT 172 Query: 237 KALAIARIDK 246 LA +++ Sbjct: 173 V-LAAVKLED 181 >gi|322805022|emb|CBZ02582.1| aminomethyltransferase (glycine cleavage system T protein) [Clostridium botulinum H04402 065] Length = 359 Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 56/302 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118 Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90 + ++ K + F+KL+ +V Sbjct: 119 KDKDVKWVMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147 +++ + + E F I + A L H ++ + + L Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKELWHAILNAGKEEGAQPIGLGARDTL 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFE 292 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G ++ D IG + KA+ +A +++ I + V R Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGAEFNIKVKKKR 352 Query: 264 VK 265 +K Sbjct: 353 IK 354 >gi|229174904|ref|ZP_04302424.1| Aminomethyltransferase [Bacillus cereus MM3] gi|228608572|gb|EEK65874.1| Aminomethyltransferase [Bacillus cereus MM3] Length = 366 Score = 82.2 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEEDFFGKETLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|284166725|ref|YP_003405004.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511] gi|284016380|gb|ADB62331.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511] Length = 375 Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 63/316 (19%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + V G + ++ +++ V + +L PQG + + + E +L Sbjct: 48 YGVVVVEGDDRLEYVDNVVSNRV-PAEDGRGCYALVLDPQGGVEIELYVYNAGE-RLLLF 105 Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT-------FSNSSFIDERF 120 S+ + L++ K+ V I + + + + + ++ DER+ Sbjct: 106 TPPSEAEPLVEDWS-EKVFIQDVDIRLATDDYAIFGIHGPTATEKVASVLNGAASPDERY 164 Query: 121 SIA-------DVLLHRTWGHNEKI------ASDIK--------------------TYHEL 147 S V + RT + A+D T+ L Sbjct: 165 SFVRGTMGDEGVTVIRTDALTGEESYEVICAADAAEDVYDILETQGLNAAPFGYRTFESL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + G T+ P ++ L N + KGCY+GQEVVSR+++R ++ + + Sbjct: 225 ALEAGSPLFETEL--EGTLP--NVLGLRNALDWEKGCYVGQEVVSRVENRGQPSRKLVGL 280 Query: 208 T-------------GTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIK- 252 T G +P + + + D +G + L A+ + VD+ ++ Sbjct: 281 TLEGAASDGEDDEDGAPAVPDAEAAVFDGDATVGEVTRAGESPLLEAVIALAVVDYGLES 340 Query: 253 KGMALTVHGVRVKASF 268 + + + V G V A+ Sbjct: 341 EDLTVRVGGEEVSATV 356 >gi|229168971|ref|ZP_04296688.1| Aminomethyltransferase [Bacillus cereus AH621] gi|228614563|gb|EEK71671.1| Aminomethyltransferase [Bacillus cereus AH621] Length = 366 Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 107/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109 L I+ S + + L + + + V + + + + Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170 Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIASDIKTY----------------- 144 F N+ +D R + +E+ A + + Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEEAAKLWEKFLEVGAEEGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|298706608|emb|CBJ34215.1| conserved unknown protein [Ectocarpus siliculosus] Length = 191 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 35/139 (25%) Query: 27 ITADVLTLPYK---IARGSAILTPQGKILLYFLISK------IEEDTFILEIDRSKRDSL 77 +T D+ L + +A L P+G+++ L+++ + ++++ S DSL Sbjct: 1 MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSL 60 Query: 78 IDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSS----------------- 114 L YKLRS V I+ ++GV W Sbjct: 61 KTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGR 120 Query: 115 ---FIDERFSIADVLLHRT 130 F D R + V L R Sbjct: 121 EARFPDPRSAALGVRLIRP 139 >gi|157692956|ref|YP_001487418.1| aminomethyltransferase [Bacillus pumilus SAFR-032] gi|166989725|sp|A8FF41|GCST_BACP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157681714|gb|ABV62858.1| aminomethyltransferase [Bacillus pumilus SAFR-032] Length = 365 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 100/316 (31%), Gaps = 64/316 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ ++ Sbjct: 50 SHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYL 109 Query: 67 LEIDR-------------------------------------------SKRDSLIDKLLF 83 L I+ D + L Sbjct: 110 LVINASNIEKDVEWLLQHQGENDVLIQNVSDEIALLALQGPLAADIMKDVADEEVTSLKP 169 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 + S + + + + E F ++ I LL + I + Sbjct: 170 FTFLSKAEVAQKEVLVSRTGYTGEDGFEIYCQSEDAVHIWSALL-KVGAPKGLIPCGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQEVVSRIQHRN 198 LR + + I P + GI + +IG+E + + + Sbjct: 229 RDTLRFEARLPLYGQELTKD-ISPLE------GGIGFAVKTDKEANFIGKEALKKQKEEG 281 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIK 252 RK I +P + P+ + + +IG + LA+ I+ + Sbjct: 282 PKRKLVGIEMIDKGIPRTDYPVFSGEKQIGVVTTGTQSPTLKKNVGLAL--IESSQAQLG 339 Query: 253 KGMALTVHGVRVKASF 268 + + V R+KA Sbjct: 340 TVVEVQVRKKRLKAKI 355 >gi|56964260|ref|YP_175991.1| aminomethyltransferase [Bacillus clausii KSM-K16] gi|59797659|sp|Q5WF30|GCST_BACSK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56910503|dbj|BAD65030.1| aminomethyltransferase [Bacillus clausii KSM-K16] Length = 367 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 104/311 (33%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A+ LQA++T D+ L A+ +A+ T G + ++ + E+ ++ Sbjct: 53 SHMGELLVEGPDALNNLQALVTNDLSKLQDNQAQYNAMCTESGGTVDDLIVYRRNENAYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L ++ + S I+ + + + V + +I ++ + + DE S Sbjct: 113 LVLNAANIQSDIEWIRAH-VSGQVTLTDISNETALLAVQGPKALAVLQTLTDEPLSEIRP 171 Query: 123 -----------------------------------ADVLLHRTWGHNEK---IASDIKTY 144 A L E + + Sbjct: 172 FRFKENVMFAAIPVLASRTGYTGEDGFELYVKAGDAAELWRAILAAGEPFGLLPCGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IGQ+ + + + + RK Sbjct: 232 DTLRFEARLPLYGQELTKD-ISPIEAGIGF--AVKTDKQAAFIGQQALKKQKEQGPSRKL 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P +G + ++G + L +A+ D AI + + Sbjct: 289 VGIEMVDRGIPRTGYRVFYQGQDVGFVTSGTQSPTLGKNVGLVLAKADAA--AIDTELEV 346 Query: 258 TVHGVRVKASF 268 V G R++A Sbjct: 347 EVRGKRLRARV 357 >gi|294678406|ref|YP_003579021.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294477226|gb|ADE86614.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003] Length = 831 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 85/279 (30%), Gaps = 48/279 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + + +P + +L P+G I ++++ E F Sbjct: 494 MTSFGKIRVEGRDATAFLQRLCANQID-VPVGRIVYTQMLNPRGGIESDLTVTRLSETAF 552 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 L + + + L + V I VL N Sbjct: 553 FLVVPGATLPRDLAWLRRHLTEERVTITDVTAAEAVLPIMGPRARDLLRRVSPDDFSNAA 612 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142 H F + R S L + ++ A + Sbjct: 613 HPFGTAREIEIGMGLARAHRVSYVGELGWELYISTDQAAHVFETLAKAGAEVGLRLCGLH 672 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D +A + + KG ++G+E V R + + R+ Sbjct: 673 AMDSCRIEKGYRHFGHDITDEDHV-LEAGLGF--AVKPEKGDFLGREAVLRKRESGLTRR 729 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 +T + L PIL D +G L AL Sbjct: 730 LVQFRLTDPEPLLFHNEPILRDGKIVGQLTSGNYGHALG 768 >gi|163941988|ref|YP_001646872.1| glycine cleavage system aminomethyltransferase T [Bacillus weihenstephanensis KBAB4] gi|229013446|ref|ZP_04170583.1| Aminomethyltransferase [Bacillus mycoides DSM 2048] gi|229135049|ref|ZP_04263854.1| Aminomethyltransferase [Bacillus cereus BDRD-ST196] gi|229807552|sp|A9VH12|GCST_BACWK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|163864185|gb|ABY45244.1| glycine cleavage system T protein [Bacillus weihenstephanensis KBAB4] gi|228648434|gb|EEL04464.1| Aminomethyltransferase [Bacillus cereus BDRD-ST196] gi|228747858|gb|EEL97724.1| Aminomethyltransferase [Bacillus mycoides DSM 2048] Length = 366 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109 L I+ S + + L + + + V + + + + Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170 Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIA-----------------SDIKTY 144 F N+ +D R + +E A + Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|194016802|ref|ZP_03055415.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061] gi|194011408|gb|EDW20977.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061] Length = 365 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 114/309 (36%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ ++ Sbjct: 50 SHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE------- 118 L I+ S + ++ LL ++ ++V+I+ + ++ DE Sbjct: 110 LVINASNIEKDVEWLLQHQGENDVLIQNVSDQIALLALQGPLAADIMKDVADEEVTSLKP 169 Query: 119 -----RFSIA--DVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPST 164 R +A +VL+ RT E + + + L + G Sbjct: 170 FTFLSRAEVAQKEVLVSRTGYTGEDGFEIYCQSEDAVHIWSAL-LKAGAPKGLIPCGLGA 228 Query: 165 -----------IFPHDALMD---LLNGISL-----TKGCYIGQEVVSRIQHRNIIRKRPM 205 ++ + D L GI + +IG+E + + + RK Sbjct: 229 RDTLRFEARLPLYGQELSKDISPLEGGIGFAVKTDKEANFIGKEALKKQKEEGPKRKLVG 288 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + + +IG + LA+ I+ + + + V Sbjct: 289 IEMIDKGIPRTDYPVFSGEKQIGVVTTGTQSPTLKKNVGLAL--IESSQAQLGTEIEVQV 346 Query: 260 HGVRVKASF 268 R+KA Sbjct: 347 RKKRLKAKI 355 >gi|229061919|ref|ZP_04199247.1| Aminomethyltransferase [Bacillus cereus AH603] gi|228717362|gb|EEL69032.1| Aminomethyltransferase [Bacillus cereus AH603] Length = 366 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109 L I+ S + + L + + + V + + + + Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170 Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIA-----------------SDIKTY 144 F N+ +D R + +E A + Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|206895461|ref|YP_002247382.1| glycine cleavage system T protein [Coprothermobacter proteolyticus DSM 5265] gi|206738078|gb|ACI17156.1| glycine cleavage system T protein [Coprothermobacter proteolyticus DSM 5265] Length = 361 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 49/285 (17%) Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK- 85 +T D+ L A + +L G ++ ++ ++ D +L ++ + + +L Y Sbjct: 69 VTVDLTKLEPLKAAYTMLLNESGGVVDDLIVYRLSPDEVLLVVNAANIEKDFQHILNYLP 128 Query: 86 -----LRSNV-----IIEIQPINGVV-----------LSWNQEHTFSNSSFIDERFSIAD 124 + NV I +Q V L+ + I R Sbjct: 129 KEGSHVFENVSDKWFDIAVQGPKAVDILKTYFPQVVDLAAFGFVSVPEHGLIISRTGYTG 188 Query: 125 VLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDFLPSTIFP 167 +G E+ + + LRI G+ + T P Sbjct: 189 EDGFEVYGPMEEAPTWWNKFMDAGSSLGLKPAGLGARDTLRIEAGLPLYGHELNEETS-P 247 Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 ++ + I K +IG+E + + + I+K+ M + T + G + ++ E+ Sbjct: 248 LESNYAFV--IDWDKPQFIGREALVKQKESG-IQKKLMGLEITGGIAREGYKVFSEGEEV 304 Query: 228 GTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + A+A R+DK + + V K Sbjct: 305 GVVTSGTMAPFLKKSIAMAFLRVDKAKIGTPVEVQIHGQMVPAKV 349 >gi|317406758|gb|EFV86898.1| hypothetical protein HMPREF0005_06002 [Achromobacter xylosoxidans C54] Length = 152 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + +H + GI T P +DL+ G+S TKGCY GQEVV+R +R Sbjct: 8 APAAQWHAADLAAGIP-WITTATQDVFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRG 66 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDI 225 +++R T P G+ + D+ Sbjct: 67 TVKRRMAFGTIAGADLP-GAELAGKDV 92 >gi|226947956|ref|YP_002803047.1| glycine cleavage system T protein [Clostridium botulinum A2 str. Kyoto] gi|254797868|sp|C1FTW3|GCST_CLOBJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226843176|gb|ACO85842.1| glycine cleavage system T protein [Clostridium botulinum A2 str. Kyoto] Length = 370 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 48/299 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118 Query: 74 RDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID-----------ERFS 121 +D + ++ +K +V I ++ + +D +R Sbjct: 119 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178 Query: 122 IAD---VLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFL---------- 161 + D L+ RT E K + +H + +N G + Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAI-LNAGKEEGAQPIGLGARDTLRFE 237 Query: 162 ----------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 TI P + M + + + +IG++ + + + + RK Sbjct: 238 ASLLLYGNEMDETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFELLDK 296 Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +P G ++ D IG + KA+ +A +++ I + V ++KA Sbjct: 297 GIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKKLKA 355 >gi|255537313|ref|XP_002509723.1| conserved hypothetical protein [Ricinus communis] gi|223549622|gb|EEF51110.1| conserved hypothetical protein [Ricinus communis] Length = 153 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 37/122 (30%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSA 43 S+ L+++S I+ G + FLQ ++T D+ + +A Sbjct: 22 STSLLNSRSVIRFSGSDTVKFLQGLLTNDIRRFNETPSEATSFLRIPNLATVSVPPMYAA 81 Query: 44 ILTPQGKILLYFLISK--------------IEED-----TFILEIDRSKRDSLIDKLLFY 84 +LTPQG+ L + + E D + ++D D L+ + Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPESDSNGSIELLADVDTYVLDELLHTFQRW 141 Query: 85 KL 86 + Sbjct: 142 VI 143 >gi|323336892|gb|EGA78150.1| Iba57p [Saccharomyces cerevisiae Vin13] Length = 516 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 44/165 (26%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376 Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227 + + + + PP + Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434 Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-----TVHGVRVKAS 267 G L G +A+ R + A + T G +K + Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKIT 479 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|224476648|ref|YP_002634254.1| glycine cleavage system aminomethyltransferase T [Staphylococcus carnosus subsp. carnosus TM300] gi|254797881|sp|B9DNN7|GCST_STACT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|222421255|emb|CAL28069.1| putative aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus carnosus subsp. carnosus TM300] Length = 364 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 112/317 (35%), Gaps = 56/317 (17%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +S+ + + GK A F+Q I++ D L A+ +A+ +G I+ + K+ Sbjct: 47 MGIFDVSHMGEVLIEGKDASDFIQYILSNDTDQLTDNKAQYTALCNDKGGIIDDLITYKL 106 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDER 119 + ++L ++ + + + + + +V +E + G + E S +D Sbjct: 107 DNQKYLLVVNAANTEKDYNWINSHSENFDVKVENVSDQYGQLAVQGPEARDYVGSLVDVD 166 Query: 120 FSIAD-------------------------------------VLLHRTWGHNEK-IASDI 141 S V + NE + + + Sbjct: 167 VSEMKPFDFKKDVTIFGKNIILSQSGYTGEDGFEIYCNSDDVVDIWDGLLENENLVPAGL 226 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQH 196 LR+ G+ D I P++ GI+ + +IG+EV+ + Sbjct: 227 GARDTLRLEAGLPLHGQDL-SEDITPYE------GGIAFAAKPLIEADFIGKEVLKEQKE 279 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAI 251 + + +P +G +L D +IG + K +A+A I++ + + Sbjct: 280 NGSAERTIGLEMLDKGIPRTGYDVLDLDGNKIGVVTSGTQSPATGKGIALAIINRDEFEM 339 Query: 252 KKGMALTVHGVRVKASF 268 + + + + +VKA Sbjct: 340 GREVLVQIRKRQVKAKI 356 >gi|187777816|ref|ZP_02994289.1| hypothetical protein CLOSPO_01408 [Clostridium sporogenes ATCC 15579] gi|187774744|gb|EDU38546.1| hypothetical protein CLOSPO_01408 [Clostridium sporogenes ATCC 15579] Length = 370 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 106/301 (35%), Gaps = 48/301 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118 Query: 74 RDSLIDKLLFYK---------------------------LRSNVIIEIQPI------NGV 100 +D + ++ +K L+ V I++Q I V Sbjct: 119 KDKDVKWIMDHKGDFNVEIVDESDNIAQLALQGPLAEEILQKIVDIDLQEIKFFKFKRDV 178 Query: 101 VLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASD---IKTYHELRINH 151 ++ + ++ F I A L H ++ ++ + LR Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAEPIGLGARDTLRFEA 238 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 ++ + T+ P + M + + + +IG++ + + + + RK Sbjct: 239 SLLLYGNEM-DETVTPLEVGMGFFVKLKVQED-FIGKDALIKQKEEGVTRKLVGFELLDK 296 Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +P G ++ D IG + KA+ +A +++ I + V +KA Sbjct: 297 GIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKELKAV 356 Query: 268 F 268 Sbjct: 357 V 357 >gi|253576440|ref|ZP_04853769.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251844077|gb|EES72096.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 376 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 96/288 (33%), Gaps = 56/288 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G + FLQ + T DV L A+ + + P G ++ LI +++E ++ Sbjct: 55 SHMGEFFVEGPESERFLQHMTTNDVTLLQPGKAQYTLLCYPDGGVVDDLLIYQLDEGKYM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 L ++ S + D L + L + V + +L+ S S + E Sbjct: 115 LVVNASNIEKDWDWLQQH-LPAEGVTMRNASDETALLAVQGPLAASLLSPLSEGEDPVAL 173 Query: 119 ---------RFSIADVLLHRTWGHNEK---------------------------IASDIK 142 R + LL RT E + + + Sbjct: 174 RPFTFIREARIAGIPALLSRTGYTGEDGFELYVAAEQAQALWDILMEAGESHGLLPAGLG 233 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR + + P I P + ++ + L +G +IG++ + + + I R+ Sbjct: 234 ARDTLRFEACLPLYGQELGPE-ITPLEVGLNRF--VKLEQGDFIGRDALIKQRDEGIPRR 290 Query: 203 RPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVG------KKALAIA 242 + +P + P+ + IG + +AI Sbjct: 291 LVGLEMIDRGIPRTHYPVFAEGSEEPIGEVTTGTQSPTLKKNLGMAIL 338 >gi|329928153|ref|ZP_08282099.1| aminomethyltransferase [Paenibacillus sp. HGF5] gi|328938030|gb|EGG34429.1| aminomethyltransferase [Paenibacillus sp. HGF5] Length = 370 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ A F+Q + T DV + A+ + + G + L+ K+ D F+ Sbjct: 53 SHMGEFMISGQDAQAFIQNMTTNDVTRISVGQAQYTLMCDDNGGTVDDLLVYKLSSDRFM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112 L ++ S D + L + + +V I +++ + Sbjct: 113 LVVNASNIDKDLQWLHEH-VTGDVAIRNVSAETALIALQGPAAENILSKATSETIGDLPS 171 Query: 113 SSFI-DERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 FI + + LL RT E I + + Sbjct: 172 FHFIQNAQVCGHAALLSRTGYTGEDGFEIYCSAGDAPDIWRGLLTTGEDHGLIPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + STI P +A + + L G +IG+E + + + + RK Sbjct: 232 DTLRFEAKLPLYGQEL-SSTISPLEASLGYF--VKLDSGDFIGREALQQQKQDGVRRKLV 288 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P S P+ IG + K+ L +A I+ ++ + + + Sbjct: 289 GIELIDRGIPRSHYPVFNGNGEPIGEVTSGTQSPSLKRNLGLALIETPYASLDSEVWVEI 348 Query: 260 HGVRVKASF 268 G ++KA Sbjct: 349 RGKKLKAKV 357 >gi|168178072|ref|ZP_02612736.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916] gi|182671482|gb|EDT83456.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916] Length = 370 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 109/306 (35%), Gaps = 48/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A F+Q ++T D+ L + + G ++ L+ K ED F Sbjct: 52 SHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFF 111 Query: 67 LEIDRSKRDSLIDKLLFYK---------------------------LRSNVIIEIQPI-- 97 L I+ S +D + ++ +K L+ V I++Q I Sbjct: 112 LVINASNKDKDVKWIMDHKGDFDVEIVDESDSIAQLALQGPLAEEILQKIVDIDLQEIKF 171 Query: 98 ----NGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIAS---DIKTY 144 V+++ + ++ F I A L H ++ + + Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 232 DTLRFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349 Query: 261 GVRVKA 266 +KA Sbjct: 350 KKELKA 355 >gi|229157826|ref|ZP_04285901.1| Aminomethyltransferase [Bacillus cereus ATCC 4342] gi|228625783|gb|EEK82535.1| Aminomethyltransferase [Bacillus cereus ATCC 4342] Length = 366 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKVWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|282860235|ref|ZP_06269306.1| aminomethyltransferase [Prevotella bivia JCVIHMP010] gi|282586968|gb|EFB92202.1| aminomethyltransferase [Prevotella bivia JCVIHMP010] Length = 364 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 92/292 (31%), Gaps = 52/292 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A F+ I T DV P + P G + L+ K+ E+ F L + Sbjct: 58 VEGPDAERFVNNIFTNDVTNAPLGQVYYGMMCHPNGGTVDDLLVYKMGEEKFFLVYNAGN 117 Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF---------------------- 110 D + + +K ++ IE G + E Sbjct: 118 IDKDVAWIDAHKEGFDIKIEHASSRYGQLAVQGPEAEAVVDEVLGLPCKELKFYTAMFVN 177 Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINHGIVD 155 + + R +G + I + LR G+ Sbjct: 178 VDGAELVLSRTGYTGEDGFEIYGPHAYILAAWDKLLASGKCKPCGLGCRDTLRFEVGLPL 237 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLP 214 + I P A + + + K +IG+ + + + ++ R + + G + +P Sbjct: 238 YGDELT-DEISPVMAGLSMFCKLGEDKPDFIGKTALVDQKANGVAKRLRGIELEG-NAIP 295 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK------VDHAIKKGMALTVH 260 G +L D +E+G + + +DK VD A+K G + V Sbjct: 296 RHGYKVLKDGVEVGEITT-----GYRLLSVDKSCAVALVDDAVKMGDTVEVQ 342 >gi|50307117|ref|XP_453537.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74636807|sp|Q6CRA2|CAF17_KLULA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|49642671|emb|CAH00633.1| KLLA0D10681p [Kluyveromyces lactis] Length = 462 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 41/184 (22%) Query: 122 IADVLLHRTWGHNEKIASDIKTYH--ELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178 I D+ +G N ++I + R G+ D N +++P T+ +A D + I Sbjct: 254 INDIFNCTAFGENPFEKANISATEIQKERFKFGLFDGNHEYIPETLLALEANFDYFEDSI 313 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------------------------- 212 + KGCY+GQE+ +R +++KR + IT + Sbjct: 314 NSDKGCYVGQELTARTFATGVLKKRCVGITIDEPQKLADWDHSKYLSIFSKLELQVQNQD 373 Query: 213 ----LPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + P GS P+ G L G +A+ R D + HA+K H + Sbjct: 374 TQAAINPFGSLSKPVKKRTRPAGQLINYNGNIGVAVVRKDYIYHALKHH-----HDIDAY 428 Query: 266 ASFP 269 P Sbjct: 429 VELP 432 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 53/163 (32%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV------------------------------- 31 S + N+S+I++ G +I FL ++T+ + Sbjct: 21 SCRVENKSYIRLLGPDSIKFLNGLVTSKLQPNFVKKNLTTISTKEQEKNNTLSSLNFSKY 80 Query: 32 --------LTLPYKIAR---GSAILTPQGKILLYFLISKIE------ED----TFILEID 70 L I+R + L +GK+L +I +D +++E D Sbjct: 81 NWGIYKECTRLEDHISRFGTYTGFLNMKGKLLTDSIIYPYPFTLKSIQDKKFPEYLMEFD 140 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 + L +KL S V + N + +W+ T Sbjct: 141 SHIAQKMERTLDNHKLLSKVKFK-HVQNEELRTWDAYITMPEE 182 >gi|229152427|ref|ZP_04280619.1| Aminomethyltransferase [Bacillus cereus m1550] gi|228631035|gb|EEK87672.1| Aminomethyltransferase [Bacillus cereus m1550] Length = 366 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDTTVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|206978449|ref|ZP_03239315.1| glycine cleavage system T protein [Bacillus cereus H3081.97] gi|206743347|gb|EDZ54788.1| glycine cleavage system T protein [Bacillus cereus H3081.97] Length = 366 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCQSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPVEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|30022309|ref|NP_833940.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus ATCC 14579] gi|30264300|ref|NP_846677.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Ames] gi|47529744|ref|YP_021093.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. 'Ames Ancestor'] gi|49187128|ref|YP_030380.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Sterne] gi|49478588|ref|YP_038290.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321610|ref|ZP_00394569.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Bacillus anthracis str. A2012] gi|165873271|ref|ZP_02217880.1| glycine cleavage system T protein [Bacillus anthracis str. A0488] gi|167634578|ref|ZP_02392898.1| glycine cleavage system T protein [Bacillus anthracis str. A0442] gi|167638652|ref|ZP_02396928.1| glycine cleavage system T protein [Bacillus anthracis str. A0193] gi|170687482|ref|ZP_02878699.1| glycine cleavage system T protein [Bacillus anthracis str. A0465] gi|170709331|ref|ZP_02899747.1| glycine cleavage system T protein [Bacillus anthracis str. A0389] gi|177655891|ref|ZP_02937083.1| glycine cleavage system T protein [Bacillus anthracis str. A0174] gi|190566093|ref|ZP_03019012.1| glycine cleavage system T protein [Bacillus anthracis Tsiankovskii-I] gi|206971185|ref|ZP_03232136.1| glycine cleavage system T protein [Bacillus cereus AH1134] gi|218905363|ref|YP_002453197.1| glycine cleavage system T protein [Bacillus cereus AH820] gi|227817001|ref|YP_002817010.1| glycine cleavage system T protein [Bacillus anthracis str. CDC 684] gi|228916861|ref|ZP_04080424.1| Aminomethyltransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929271|ref|ZP_04092298.1| Aminomethyltransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228954511|ref|ZP_04116536.1| Aminomethyltransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960493|ref|ZP_04122143.1| Aminomethyltransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228987418|ref|ZP_04147538.1| Aminomethyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229047921|ref|ZP_04193497.1| Aminomethyltransferase [Bacillus cereus AH676] gi|229071730|ref|ZP_04204945.1| Aminomethyltransferase [Bacillus cereus F65185] gi|229081485|ref|ZP_04213984.1| Aminomethyltransferase [Bacillus cereus Rock4-2] gi|229111700|ref|ZP_04241248.1| Aminomethyltransferase [Bacillus cereus Rock1-15] gi|229123745|ref|ZP_04252940.1| Aminomethyltransferase [Bacillus cereus 95/8201] gi|229129506|ref|ZP_04258477.1| Aminomethyltransferase [Bacillus cereus BDRD-Cer4] gi|229146795|ref|ZP_04275160.1| Aminomethyltransferase [Bacillus cereus BDRD-ST24] gi|229180504|ref|ZP_04307846.1| Aminomethyltransferase [Bacillus cereus 172560W] gi|229192437|ref|ZP_04319400.1| Aminomethyltransferase [Bacillus cereus ATCC 10876] gi|229601336|ref|YP_002868518.1| glycine cleavage system T protein [Bacillus anthracis str. A0248] gi|254683988|ref|ZP_05147848.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. CNEVA-9066] gi|254721822|ref|ZP_05183611.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. A1055] gi|254736336|ref|ZP_05194042.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Western North America USA6153] gi|254741374|ref|ZP_05199061.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Kruger B] gi|254753991|ref|ZP_05206026.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Vollum] gi|254757862|ref|ZP_05209889.1| glycine cleavage system aminomethyltransferase T [Bacillus anthracis str. Australia 94] gi|296504707|ref|YP_003666407.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis BMB171] gi|34921556|sp|Q818M3|GCST_BACCR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|34921567|sp|Q81M06|GCST_BACAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|59797757|sp|Q6HDT6|GCST_BACHK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711365|sp|B7JMV1|GCST_BACC0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797864|sp|C3P8D5|GCST_BACAA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797865|sp|C3LKQ4|GCST_BACAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|29897866|gb|AAP11141.1| Aminomethyltransferase [Bacillus cereus ATCC 14579] gi|30258945|gb|AAP28163.1| aminomethyltransferase [Bacillus anthracis str. Ames] gi|47504892|gb|AAT33568.1| glycine cleavage system T protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181055|gb|AAT56431.1| glycine cleavage system T protein [Bacillus anthracis str. Sterne] gi|49330144|gb|AAT60790.1| aminomethyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164710988|gb|EDR16556.1| glycine cleavage system T protein [Bacillus anthracis str. A0488] gi|167513500|gb|EDR88870.1| glycine cleavage system T protein [Bacillus anthracis str. A0193] gi|167530030|gb|EDR92765.1| glycine cleavage system T protein [Bacillus anthracis str. A0442] gi|170125757|gb|EDS94668.1| glycine cleavage system T protein [Bacillus anthracis str. A0389] gi|170668677|gb|EDT19423.1| glycine cleavage system T protein [Bacillus anthracis str. A0465] gi|172079924|gb|EDT65029.1| glycine cleavage system T protein [Bacillus anthracis str. A0174] gi|190563012|gb|EDV16978.1| glycine cleavage system T protein [Bacillus anthracis Tsiankovskii-I] gi|206733957|gb|EDZ51128.1| glycine cleavage system T protein [Bacillus cereus AH1134] gi|218538922|gb|ACK91320.1| glycine cleavage system T protein [Bacillus cereus AH820] gi|227006887|gb|ACP16630.1| aminomethyltransferase [Bacillus anthracis str. CDC 684] gi|228591014|gb|EEK48870.1| Aminomethyltransferase [Bacillus cereus ATCC 10876] gi|228602928|gb|EEK60407.1| Aminomethyltransferase [Bacillus cereus 172560W] gi|228636623|gb|EEK93088.1| Aminomethyltransferase [Bacillus cereus BDRD-ST24] gi|228654111|gb|EEL09978.1| Aminomethyltransferase [Bacillus cereus BDRD-Cer4] gi|228659880|gb|EEL15525.1| Aminomethyltransferase [Bacillus cereus 95/8201] gi|228671694|gb|EEL26990.1| Aminomethyltransferase [Bacillus cereus Rock1-15] gi|228701792|gb|EEL54279.1| Aminomethyltransferase [Bacillus cereus Rock4-2] gi|228711325|gb|EEL63285.1| Aminomethyltransferase [Bacillus cereus F65185] gi|228723378|gb|EEL74747.1| Aminomethyltransferase [Bacillus cereus AH676] gi|228772390|gb|EEM20836.1| Aminomethyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228799190|gb|EEM46157.1| Aminomethyltransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805168|gb|EEM51762.1| Aminomethyltransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228830561|gb|EEM76171.1| Aminomethyltransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842784|gb|EEM87869.1| Aminomethyltransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265744|gb|ACQ47381.1| glycine cleavage system T protein [Bacillus anthracis str. A0248] gi|296325759|gb|ADH08687.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis BMB171] Length = 366 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|254445973|ref|ZP_05059449.1| glycine cleavage system T protein [Verrucomicrobiae bacterium DG1235] gi|198260281|gb|EDY84589.1| glycine cleavage system T protein [Verrucomicrobiae bacterium DG1235] Length = 367 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 50/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + FL ++T DV T+ A S + P G ++ L+ ++ E +++ Sbjct: 52 SHMGEVTVKGPQSEAFLNYVLTNDVSTMDDGKALYSLMCQPDGGVVDDLLVYRMAEGSYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQ------------------- 106 L ++ + + L V +++ G+V Sbjct: 112 LCLNAANAVKDVAWLEKEAANFEVELVDVSEKYGLVALQGPKAFPILKGLSSVDLSGLGY 171 Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-----------------H 145 + + S I R + + EK A + Sbjct: 172 YRFVQGEIAGISCIISRTGYTGEVGVELFVAAEKTAELAEALFDAGKADGLVLAGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR+ G + I P +A + +SL K C +IG+E + + +K Sbjct: 232 SLRLEAGYSLYGHEI-DEKIGPVEAGLMWT--VSLKKPCDFIGKEAILSKKQSGPAQKIV 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARID-KVDHAIKKGMALTV 259 TG + G+ +++ +GT+ + +A+ A +D V + + + L Sbjct: 289 FFKTGGRRIARPGTEVVSGGAAVGTVVSGTFSPILNEAIGSALVDAAVAKSDELAVDLRG 348 Query: 260 HGVRVKASFPH 270 ++ + P Sbjct: 349 KAFPIERARPP 359 >gi|229543867|ref|ZP_04432926.1| glycine cleavage system T protein [Bacillus coagulans 36D1] gi|229325006|gb|EEN90682.1| glycine cleavage system T protein [Bacillus coagulans 36D1] Length = 373 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 100/288 (34%), Gaps = 54/288 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G ++ FLQ ++T DV L A+ +A+ G + L+ ++ E+ + Sbjct: 52 SHMGEILVEGPQSLGFLQKMMTNDVSKLKPGAAQYTAMCNEAGGTVDDLLVYQLGENRYW 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------FS 111 L ++ + + L+ ++ +V I + L+ Sbjct: 112 LVVNAANTEKDYKWLVSHR-TEDVSITDISASVAQLALQGPLATEVMQKLAPEADVFSIP 170 Query: 112 NSSFI-DERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 SFI + + + VLL RT E + +K + E Sbjct: 171 TFSFIENAKVAGCKVLLSRTGYTGEDGFEIYCRSEDALKLWDEILAKGREKGVLPCGLGA 230 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR G+ + I P +A + + L K +IG++ + + + R+ Sbjct: 231 RDTLRFEAGLCLYGQELA-EDISPLEAGIGF--AVKLKKEADFIGKQALLAQKAEGLKRR 287 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARI 244 I +P G + D IGT+ LA+ R+ Sbjct: 288 LAGIEMIGRGIPRHGYSVYAGDERIGTVTTGTQSPTLKKNIGLALLRV 335 >gi|213162146|ref|ZP_03347856.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 82 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77 Query: 61 EEDTF 65 E D F Sbjct: 78 ERDGF 82 >gi|228922979|ref|ZP_04086272.1| Aminomethyltransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836612|gb|EEM81960.1| Aminomethyltransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 366 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPTLVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|219670050|ref|YP_002460485.1| glycine cleavage system protein T [Desulfitobacterium hafniense DCB-2] gi|254797871|sp|B8FT33|GCST_DESHD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|219540310|gb|ACL22049.1| glycine cleavage system T protein [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 54/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK ++ FLQ ++T DV + + S + T G ++ L+ + + F+ Sbjct: 52 SHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFL 111 Query: 67 LEIDRSK-----------------------------------RDSLIDKLLFYKLRSNVI 91 L ++ S + ++ KL L + + Sbjct: 112 LVVNASNTDKDFAWMQAQAEGFEISLENRSGDFAQLALQGPWAEKILQKLTSMDL-AQIN 170 Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSF----IDERFSIADVLLHRTWGHNEKIASDIKTY 144 + ++GV+ ++ F E + G + Sbjct: 171 YYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + P I P +A + + L K +IG+E +S + + + RK Sbjct: 231 DTLRFEARLPLYGNELGPD-ITPLEAGLGFF--VKLEKDNFIGKEALSAQKEKGVPRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + + S P+ + EIG + AL + + I + + + Sbjct: 288 GLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLNKNIALGLIPPEYAQ--IGETLDVI 345 Query: 259 VHGVRVKASF 268 + G VKA Sbjct: 346 IRGKAVKARI 355 >gi|118479410|ref|YP_896561.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis str. Al Hakam] gi|196046283|ref|ZP_03113509.1| glycine cleavage system T protein [Bacillus cereus 03BB108] gi|225866209|ref|YP_002751587.1| glycine cleavage system T protein [Bacillus cereus 03BB102] gi|228935548|ref|ZP_04098364.1| Aminomethyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947943|ref|ZP_04110230.1| Aminomethyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186469|ref|ZP_04313632.1| Aminomethyltransferase [Bacillus cereus BGSC 6E1] gi|166221537|sp|A0RIL1|GCST_BACAH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797866|sp|C1ERV0|GCST_BACC3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|118418635|gb|ABK87054.1| aminomethyltransferase [Bacillus thuringiensis str. Al Hakam] gi|196022753|gb|EDX61434.1| glycine cleavage system T protein [Bacillus cereus 03BB108] gi|225790883|gb|ACO31100.1| aminomethyltransferase [Bacillus cereus 03BB102] gi|228596983|gb|EEK54640.1| Aminomethyltransferase [Bacillus cereus BGSC 6E1] gi|228811930|gb|EEM58264.1| Aminomethyltransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824086|gb|EEM69902.1| Aminomethyltransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 366 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|158317892|ref|YP_001510400.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EAN1pec] gi|158113297|gb|ABW15494.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EAN1pec] Length = 409 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 5/138 (3%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + + + LRI + PH+ L + L KGCY GQE V+R Sbjct: 251 AGATPAGLSAFEALRIAARRPRLGRE-TDHRTIPHEVGW-LPAAVHLDKGCYRGQETVAR 308 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 + + +R +++ + G+P+ + +G +G L + V ++ Sbjct: 309 VHNLGRPPRRMVLLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPA 368 Query: 254 GMALTV---HGVRVKASF 268 L V G +V A+ Sbjct: 369 DAVLVVTDPDGAQVAATI 386 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 1/104 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN+ ++V G + +L ++ + + L + +L+P G I + L+ + Sbjct: 57 SNRGVLRVTGPERLTWLHSLTSQHLSQLAPGRGTEALVLSPHGHIEHH-LVLADDGTATW 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 ++++ L+ L + V VLS Sbjct: 116 IDVEPGSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAA 159 >gi|325270243|ref|ZP_08136850.1| glycine cleavage system T protein [Prevotella multiformis DSM 16608] gi|324987544|gb|EGC19520.1| glycine cleavage system T protein [Prevotella multiformis DSM 16608] Length = 361 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 101/305 (33%), Gaps = 67/305 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ I T DV LP + P G ++ I K++E F+ Sbjct: 51 SHMGEVMVSGPEADKYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDEQLFL 110 Query: 67 LEIDRSKRDSLIDKL----LFYKLRSNVIIEI-QPINGVVLSWNQEHTF----------- 110 + I+ + D + + + NV+IE G + E Sbjct: 111 MTINAANIDKDMAWIEQNGKGF----NVVIENKSDAYGQLAIQGPEAEEKMEKVLGLACK 166 Query: 111 ------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 I R +G I +K + + Sbjct: 167 DLKFYEVKQQEKDGEKVIVSRTGYTGEDGFEVYGTPGYI---VKAWDKLMDAGVKPCGLG 223 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G+ + I P A + + + K +IG+E + R + + R+ Sbjct: 224 CRDTLRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGVTRR 280 Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK------VDHAIKKGM 255 R + + G + +P G +L D E+G + + +K VD AIK G Sbjct: 281 LRGIELEG-NAIPRHGYKVLKDGKEVGEVTT-----GYRLISTEKSCAVALVDAAIKMGD 334 Query: 256 ALTVH 260 ++ V Sbjct: 335 SVEVQ 339 >gi|239637650|ref|ZP_04678622.1| glycine cleavage system T protein [Staphylococcus warneri L37603] gi|239596868|gb|EEQ79393.1| glycine cleavage system T protein [Staphylococcus warneri L37603] Length = 363 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 105/310 (33%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D ++ Sbjct: 53 SHMGEIQIQGNDAKSFVQYILSNDTNNLTDSKALYTALCNEEGGIIDDLVTYKLADDNYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124 L ++ + D + + +V ++ + G + + +D S Sbjct: 113 LVVNAANTDKDFKWIEKHAKSFDVEVKNVSEQYGQLALQGPKARDLMQKLVDIDISEMGM 172 Query: 125 ------------------------------------VLLHRTWGHNEKIASDIKTYHELR 148 V + + + LR Sbjct: 173 FEFKKDVQLFNKNVILSQSGYTGEDGFEIYCDANDTVAIWEGLLEYDVTPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSSRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G +L D +IG + K++A+A I++ + + + + Sbjct: 286 VGLELLDKGIARTGYEVLDLDGNQIGEVTSGTKSPSSDKSIALAIINRDAFEMGRELLVQ 345 Query: 259 VHGVRVKASF 268 V +VKA Sbjct: 346 VRKRQVKAKI 355 >gi|148378696|ref|YP_001253237.1| glycine cleavage system T protein [Clostridium botulinum A str. ATCC 3502] gi|148288180|emb|CAL82248.1| aminomethyltransferase [Clostridium botulinum A str. ATCC 3502] Length = 375 Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 64 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 123 Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90 + ++ K + F+KL+ +V Sbjct: 124 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 183 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147 ++ + + E F I + A L H ++ + + L Sbjct: 184 LVNGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 239 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 240 RFEASLLLYGNEM-DETITPLEVGMGFFAKLKIEED-FIGKDALIKQKAEGVTRKLVGFE 297 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 298 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 357 Query: 264 VKA 266 +KA Sbjct: 358 LKA 360 >gi|295706575|ref|YP_003599650.1| glycine cleavage system T protein [Bacillus megaterium DSM 319] gi|294804234|gb|ADF41300.1| glycine cleavage system T protein [Bacillus megaterium DSM 319] Length = 366 Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 108/316 (34%), Gaps = 54/316 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G ++ FLQ +T DV L A+ +A+ G + LI K + ++ Sbjct: 53 SHMGEILVTGADSLAFLQHTMTNDVSALVDGKAQYTAMCYEDGGTVDDLLIYKKADQEYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDE 118 L ++ + + L+ +K + +V + Q L+ Q T N S + Sbjct: 113 LVVNAANIQKDYEWLVSHK-QGDVTLVNQSDETAQLALQGPVAEKVLQTLTNENLSLLKP 171 Query: 119 RFSIAD--------VLLHRT--------------------WGHNEKIASD-------IKT 143 F+ AD L+ RT W + SD + Sbjct: 172 -FTFADDVEVANVKALVSRTGYTGEDGFEIYCSSADASHLWTAILEAGSDEGVLPCGLGA 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IG+EV+ + RK Sbjct: 231 RDTLRFEATLALYGQEL-SKDITPIEARIGF--AVKTNKDSFIGKEVLKEQRESGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + D+ +IG + LA+ + + + + + Sbjct: 288 VGIEMIDKGIPRHGYEVFADEEQIGFVTTGTQSPTLKKNIGLALLSAEYTELGQEVEVQV 347 Query: 258 TVHGVRVKASFPHWYK 273 ++ K +YK Sbjct: 348 RKKRLKAKVVSTPFYK 363 >gi|153870446|ref|ZP_01999846.1| Glycine cleavage T protein [Beggiatoa sp. PS] gi|152073082|gb|EDN70148.1| Glycine cleavage T protein [Beggiatoa sp. PS] Length = 123 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPIL 221 P + G+S KGCY GQE+V+R+Q+ +++R + + PP G + Sbjct: 6 EEFVPQMVNYQAIGGVSFKKGCYTGQEIVARMQYLGTLKRRMYLARINTNTPPQPGDALY 65 Query: 222 TDDIE--IGTLGVVV-----GKKALAIARIDK 246 ++ E +G + G LAI +I Sbjct: 66 VNNNEQNVGKIVNAQIHPNGGVVVLAIIQISH 97 >gi|229093285|ref|ZP_04224402.1| Aminomethyltransferase [Bacillus cereus Rock3-42] gi|228690114|gb|EEL43909.1| Aminomethyltransferase [Bacillus cereus Rock3-42] Length = 366 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + +RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGALRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|182415175|ref|YP_001820241.1| glycine cleavage system T protein [Opitutus terrae PB90-1] gi|177842389|gb|ACB76641.1| glycine cleavage system T protein [Opitutus terrae PB90-1] Length = 369 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 99/310 (31%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A FL ++T DV L S + P G ++ L+ E + + Sbjct: 52 SHMGEVDVHGPDAARFLNRLVTNDVAKLFPGRVLYSPMCYPNGGVVDDLLVYMREPNRYF 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105 L ++ S + + +V I + + +L+ Sbjct: 112 LCVNASNVAKDLAWMREQASGFDVTITDRSDDYALLAVQGPAAAAIVQSLTGAKLGALGY 171 Query: 106 ---------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 E F + ++A+ LL H ++A + Sbjct: 172 YHFGEGTVAGVQCLISRTGYTGEDGFELYHAPADAVTLAEALLRAGAPHGLELAG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR+ G + + I P A + + L KG ++G+E + + K Sbjct: 231 DSLRLEAGYPLYGHELT-AEISPLTAGLGWT--VKLNKGADFVGREPLLAEKTNGAPHKV 287 Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258 TG + + +P+L ++G + +A+ A + +A+ Sbjct: 288 VFFRTGDRRIARAETPVLDGAGQQVGRVLSGTLSPMLNEAIGSALVTTASATPDAPLAVD 347 Query: 259 VHGVRVKASF 268 + G R+ Sbjct: 348 IRGTRLNLHL 357 >gi|327439694|dbj|BAK16059.1| glycine cleavage system T protein [Solibacillus silvestris StLB046] Length = 367 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ +LQ +++ D+ + A+ SA+ G ++ L ++E + ++ Sbjct: 53 SHMGEIIVEGPDALVYLQKMLSNDISKIAIGGAQYSALCYEDGGVVDDLLTYRLENNRYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L ++ + + + L + + +V + + ++ + Sbjct: 113 LCVNAANIEKDFEWLQQH-VEGDVKVANLSDDYAQIALQGPLSQEVLQTLTATDLTAIKY 171 Query: 110 --------FSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144 S + R +G I A+ + Sbjct: 172 FKFQDNVEVGGHSVLVSRSGYTGEDGFEIYGAPAAIVDLWNKILEAGKDQGVVAAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + L K +IGQ+ + + + RK Sbjct: 232 DTLRFEACLPLYGQEI-SKEISPLEAGIGF--AVKLAKDPQFIGQQALIDQKENGLTRKS 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + D EIG + LA+ ID + + + Sbjct: 289 VGIEMIDKGIPRHGYKVFKDGEEIGFVTTGTQSPMTKRNIGLAL--IDAKFTEVGTELEI 346 Query: 258 TVHGVRVKASF 268 V R KA Sbjct: 347 EVRKNRAKAVV 357 >gi|213023111|ref|ZP_03337558.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 81 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 28/63 (44%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 ++ + L + + + G + ++Q +TADV + + +A +GK+ + + Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78 Query: 61 EED 63 + Sbjct: 79 RDG 81 >gi|153932816|ref|YP_001383080.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum A str. ATCC 19397] gi|153934598|ref|YP_001386629.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum A str. Hall] gi|166221546|sp|A7FRV3|GCST_CLOB1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|152928860|gb|ABS34360.1| glycine cleavage system T protein [Clostridium botulinum A str. ATCC 19397] gi|152930512|gb|ABS36011.1| glycine cleavage system T protein [Clostridium botulinum A str. Hall] Length = 370 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118 Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90 + ++ K + F+KL+ +V Sbjct: 119 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147 ++ + + E F I + A L H ++ + + L Sbjct: 179 LVNGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFAKLKIEED-FIGKDALIKQKAEGVTRKLVGFE 292 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352 Query: 264 VKA 266 +KA Sbjct: 353 LKA 355 >gi|330685997|gb|EGG97620.1| aminomethyltransferase [Staphylococcus epidermidis VCU121] Length = 363 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 103/310 (33%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D ++ Sbjct: 53 SHMGEIEIQGNDAKSFVQYILSNDTNNLTDSKALYTALCNEEGGIIDDLVTYKLADDDYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124 L ++ + D + + V ++ + G + + +D S Sbjct: 113 LVVNAANTDKDFKWIEKHVKSFEVEVKNVSEQYGQLALQGPKARDLMQKLVDIDISEMGM 172 Query: 125 ------------------------------------VLLHRTWGHNEKIASDIKTYHELR 148 V + + + LR Sbjct: 173 FEFKKDVQLFNKNVILSQSGYTGEDGFEIYCDANDTVAIWEGLLEYDVTPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-----YIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIDDDFIGKSVLKDQKENGSSRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G +L D +IG + K++A+A I++ + + + + Sbjct: 286 VGLELLDKGIARTGYEVLDIDGNQIGEVTSGTKSPSSDKSIALAIINRDAFEMGRELLVQ 345 Query: 259 VHGVRVKASF 268 V +VKA Sbjct: 346 VRKRQVKAKI 355 >gi|320533905|ref|ZP_08034483.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 171 str. F0337] gi|320133879|gb|EFW26249.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 171 str. F0337] Length = 170 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIR 201 + LRI G + + PH+ +D L + LTKGCY GQE ++R + Sbjct: 3 AWEALRIEAGRPRHARE-ADARAIPHE--LDWLRTAVHLTKGCYPGQETIARTLNLGRPP 59 Query: 202 KRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253 +R ++ DLP G+ + + +G + V G ALA+ R A+ Sbjct: 60 RRLTVLQLDGLVGDLPRPGATVRMGERTVGAVTSVARHHELGPIALALLR-----RAVPV 114 Query: 254 GMALTVHGVRV 264 G LTV V Sbjct: 115 GEQLTVEVTEV 125 >gi|52080993|ref|YP_079784.1| glycine cleavage system aminomethyltransferase T [Bacillus licheniformis ATCC 14580] gi|52786369|ref|YP_092198.1| glycine cleavage system aminomethyltransferase T [Bacillus licheniformis ATCC 14580] gi|319645049|ref|ZP_07999282.1| aminomethyltransferase [Bacillus sp. BT1B_CT2] gi|81690984|sp|Q65HF9|GCST_BACLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|52004204|gb|AAU24146.1| aminomethyltransferase (glycine cleavage system protein T) [Bacillus licheniformis ATCC 14580] gi|52348871|gb|AAU41505.1| GcvT [Bacillus licheniformis ATCC 14580] gi|317392858|gb|EFV73652.1| aminomethyltransferase [Bacillus sp. BT1B_CT2] Length = 364 Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 105/311 (33%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G ++PFLQ ++T DV TL A+ +A+ G + L+ K + ++ Sbjct: 50 SHMGEVEITGTDSLPFLQKLLTNDVSTLKEGGAQYTAMCYEDGGTIDDLLVYKKAANVYM 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L I+ + D +D + + ++ +V + +L+ Sbjct: 110 LVINAANIDKDVDWMNKH-IKGDVSVRNVSDEIALLALQGPKAEAILKQVADHDLAELKP 168 Query: 110 --FSNSSFI-----------------------DERFSIADVLLHRTWGHNEKIASDIKTY 144 F + + + +E + LL T + + + Sbjct: 169 FMFRDDAAVGSVQALVSRTGYTGEDGFEIYCRNEDAACIWKLLLETGKDSGLVPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IG+ V++ + RK Sbjct: 229 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKTNKASDFIGKAVLASQKEHGADRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 + +P G + + G + LA+ + + A+ + + Sbjct: 286 VGLEMIDKGIPRHGYAVYYQGEQAGEVTTGTQSPTLKKNVGLALLKKEAC--ALDTVVEV 343 Query: 258 TVHGVRVKASF 268 + R+KA Sbjct: 344 EIRNKRLKAKI 354 >gi|52141267|ref|YP_085561.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus E33L] gi|196034863|ref|ZP_03102270.1| glycine cleavage system T protein [Bacillus cereus W] gi|59797682|sp|Q634V6|GCST_BACCZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|51974736|gb|AAU16286.1| aminomethyltransferase [Bacillus cereus E33L] gi|195992402|gb|EDX56363.1| glycine cleavage system T protein [Bacillus cereus W] Length = 366 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSNEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|229198354|ref|ZP_04325060.1| Aminomethyltransferase [Bacillus cereus m1293] gi|301055720|ref|YP_003793931.1| aminomethyltransferase [Bacillus anthracis CI] gi|228585054|gb|EEK43166.1| Aminomethyltransferase [Bacillus cereus m1293] gi|300377889|gb|ADK06793.1| aminomethyltransferase [Bacillus cereus biovar anthracis str. CI] Length = 366 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|89895626|ref|YP_519113.1| hypothetical protein DSY2880 [Desulfitobacterium hafniense Y51] gi|122482098|sp|Q24TH3|GCST_DESHY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|89335074|dbj|BAE84669.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 365 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 54/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK ++ FLQ ++T DV + + S + T G ++ L+ + + F+ Sbjct: 52 SHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFL 111 Query: 67 LEIDRSK-----------------------------------RDSLIDKLLFYKLRSNVI 91 L ++ + + ++ KL L + + Sbjct: 112 LVVNAANTDKDFAWMQAQAEGFEISLENRSGDFAQLALQGPWAEKILQKLTSMDL-AQIN 170 Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSF----IDERFSIADVLLHRTWGHNEKIASDIKTY 144 + ++GV+ ++ F E + G + Sbjct: 171 YYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + P I P +A + + L K +IG+E +S + + + RK Sbjct: 231 DTLRFEARLPLYGNELGPD-ITPLEAGLGFF--VKLEKDNFIGKEALSAQKEKGVPRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + + S P+ + EIG + AL + + I + + + Sbjct: 288 GLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLNKNIALGLIPPEYAQ--IGETLDVI 345 Query: 259 VHGVRVKASF 268 + G VKA Sbjct: 346 IRGKAVKARI 355 >gi|313122725|ref|YP_004044652.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] gi|312296207|gb|ADQ69296.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] Length = 368 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 105/306 (34%), Gaps = 48/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S +KV G A + + + DV L A+ S IL +G I+ ++ K ++ Sbjct: 51 SHMSEVKVSGPDATELMNRLTSNDVRELDQGDAQYSCILDQEGIIIDDTVVYKYPDENAY 110 Query: 67 LEID-RSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 L + + ++++ + LR +V + + + V + D Sbjct: 111 LFVPNAGHGEQMVERWSEHAHRLGLRVSVENKTEELGLVAVQGPDAIEIVEGLSQDPLTS 170 Query: 119 --RFSIA-------DVLLHRTWGHNE-------KIASDIKTYHE--------------LR 148 RFS+ D L+ RT E + + + LR Sbjct: 171 LARFSMMRTSIAGVDCLVARTGYTGEDGVEIFFAVGDSHEMWDAFSDVPPCGLGSRDTLR 230 Query: 149 INHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + G++ DF P P +A + + + L+K +IGQ+ + + + + + Sbjct: 231 LEAGLLLSGQDFDPEAEPRTPLEAKLSFV--VDLSKPSFIGQDALETLAETGVDHELVGL 288 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 +P G +L D IG + ALA D+ + + + Sbjct: 289 QLNERGIPRHGYDVLRDGEHIGHVTSGTMSPTLNQPIALAYVNSDEAEENNTVAVKIRDR 348 Query: 261 GVRVKA 266 V Sbjct: 349 NVPATI 354 >gi|298246105|ref|ZP_06969911.1| glycine cleavage system T protein [Ktedonobacter racemifer DSM 44963] gi|297553586|gb|EFH87451.1| glycine cleavage system T protein [Ktedonobacter racemifer DSM 44963] Length = 374 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 101/309 (32%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ KV G A+ FLQ ++ DV L A + + P G + LI + E+ ++ Sbjct: 59 SHMGEFKVEGSDALAFLQYLVPNDVSRLAVGQALYTQLCRPDGTTIDDLLIYHLAEEQYM 118 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109 + ++ + D + + +NV + Q +++ Sbjct: 119 IVVNAANIDKDYAWIESHAQKFANVTLSNQSDTTALIALQGPLATSILQPLADVKLDEIK 178 Query: 110 ---FSNSSFIDER------------------FSIADVLLHRTWGHNEK----IASDIKTY 144 F+ R S+ L +T K + + + Sbjct: 179 YYHFAPGQVAGIRCLISRTGYTGEDGFELYYPSVDAARLWQTLLEAGKPQGVLPAGLGAR 238 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR+ + P +A + + L K +IG+ + + + + + ++ Sbjct: 239 DTLRLEAAYCLYGHEL-DDETNPLEAGLGWT--VKLKKSAEFIGRSALQQAKEQGLKKRL 295 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTV 259 I +P SG I + IG L K++ + +D + + + + Sbjct: 296 VGIELLERGVPRSGYAIYDGEQRIGVLTSGSHGPTVQKSIGLGFVDPAHVSAGTRVQIEI 355 Query: 260 HGVRVKASF 268 G RV A Sbjct: 356 RGKRVAAQV 364 >gi|328950310|ref|YP_004367645.1| Aminomethyltransferase [Marinithermus hydrothermalis DSM 14884] gi|328450634|gb|AEB11535.1| Aminomethyltransferase [Marinithermus hydrothermalis DSM 14884] Length = 354 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 63/306 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + D L A+ S + G ++ + + E +++ ++ + Sbjct: 56 VRGPEALEFLQYVTLNDAARLKVGRAQYSMLPNANGGVVDDVYLYRTGEREYLMVVNAAN 115 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------NSSFIDER 119 + L R V +E + +L+ + +S + R Sbjct: 116 IEKDFAHLAAIAPRYKVELEDASADWALLAVQGPQAEALLAGLVDVPLAEKRKNSVFEAR 175 Query: 120 FSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 + L RT E + + L + +A Sbjct: 176 LAGRPARLARTGYTGEDGFEVFVRPEDAPAVWEALLEAGAVPCG---LGARDTLRLEAGF 232 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHR----------------------NIIRKRPMIITGT 210 L G E+ R R+R + + Sbjct: 233 ALY-----------GHELTDETNPRCTPFAWVVKEHKEFLGKPALLAGDCRERLVGLVLE 281 Query: 211 DDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG--VRV 264 +P +G +L + +G + V +K +A+A +++ + + V G Sbjct: 282 RGVPRAGYTVLREGRPVGRVTSGTMSPVLRKGIALAYVEEAFAEEGTELLVEVRGKPYPA 341 Query: 265 KASFPH 270 + P Sbjct: 342 RVVKPP 347 >gi|333031446|ref|ZP_08459507.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011] gi|332742043|gb|EGJ72525.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011] Length = 363 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 96/314 (30%), Gaps = 54/314 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FLQ + + DV L + S + QG I+ FL+ K EED ++ Sbjct: 49 SHMGEIWVKGDKALDFLQRVTSNDVSKLQVGKIQYSCFINEQGGIIDDFLVYKYEEDKYL 108 Query: 67 LEIDRS----------------------------------KRDSLIDKLL-------FYK 85 L ++ + K + KL Y Sbjct: 109 LVVNAANTEKDWKWCVAQNTMGAELENASARMAQLAVQGPKATETLQKLTSINLKDMKYY 168 Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKT 143 + + E V++S F E + + + + Sbjct: 169 TFA--VGEFAGAPEVIVSNTGYTGAGGFELYFYPEHAMLIWNAIFEAGKEFDIKPVGLGA 226 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D T P +A + + K +IG+ ++ + + + RK Sbjct: 227 RDTLRLEMGFNLYGNDM-SDTTTPLEANLGWITKFVEGKD-FIGRSILEKQKAEGVSRKL 284 Query: 204 PMIITGTDDLPPSGSPI-LTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 I +P G I D EIG + + + + + + Sbjct: 285 IGFILEDRGVPRQGYKICNADGDEIGEVTSGTMSPTRKIGVGMGYVKTEYAALDTEIYIV 344 Query: 257 LTVHGVRVKASFPH 270 + ++ + P Sbjct: 345 VRNRKLKARIVKPP 358 >gi|311069059|ref|YP_003973982.1| glycine cleavage system aminomethyltransferase T [Bacillus atrophaeus 1942] gi|310869576|gb|ADP33051.1| glycine cleavage system aminomethyltransferase T [Bacillus atrophaeus 1942] Length = 364 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ GK ++ FLQ ++T DV L A+ +A+ P G + LI + + ++ Sbjct: 50 SHMGEVKLTGKDSLSFLQKLMTNDVSKLEPGCAQYTAMCYPDGGTVDDLLIYQKADSHYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 L I+ S + I+ L + +V IE +L+ Sbjct: 110 LVINASNIEKDINWLKEHA-EGDVHIENLSDQLSLLAVQGPEA 151 >gi|42783351|ref|NP_980598.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus ATCC 10987] gi|217961718|ref|YP_002340288.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus AH187] gi|222097672|ref|YP_002531729.1| glycine cleavage system aminomethyltransferase t [Bacillus cereus Q1] gi|229140961|ref|ZP_04269505.1| Aminomethyltransferase [Bacillus cereus BDRD-ST26] gi|59797813|sp|Q730W1|GCST_BACC1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711368|sp|B7HNZ1|GCST_BACC7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797867|sp|B9IXL9|GCST_BACCQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|42739279|gb|AAS43206.1| glycine cleavage system T protein [Bacillus cereus ATCC 10987] gi|217064927|gb|ACJ79177.1| glycine cleavage system T protein [Bacillus cereus AH187] gi|221241730|gb|ACM14440.1| glycine cleavage system T protein [Bacillus cereus Q1] gi|228642537|gb|EEK98824.1| Aminomethyltransferase [Bacillus cereus BDRD-ST26] gi|324328139|gb|ADY23399.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis serovar finitimus YBT-020] Length = 366 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPVEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|296185700|ref|ZP_06854109.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] gi|296049828|gb|EFG89253.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] Length = 380 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 100/315 (31%), Gaps = 51/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F Sbjct: 52 SHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYFY 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121 L I+ D ++ +K +V II I P + ++ Sbjct: 112 LVINAGNIDKDFKWMMDHKDNLDVDIINISPDICEFAIQGPKAQMILQKVVNIDLENIKF 171 Query: 122 ----------IADVLLHRTWGHNEK-------IASDIKTY-------------------- 144 D ++ RT E + Sbjct: 172 FYCERNVKVNNVDCMISRTGYTGEDGFEIFCNAKDGESIWVKLLEVGKDDGLIPVGLGCR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P +A + + L + +IG+E + + + + + RK Sbjct: 232 DTLRFEACLPLYGNELT-EDISPLEAGIGFF--VKLNEDEFIGKEALMKQKSQGLKRKIA 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G + + EIG + LA+ + D + + + Sbjct: 289 GFEMKDRGIPRHGYKVQVNGEEIGFVTTGYKSPSLNKNIGLALIKSDYAALGKEIEIIIR 348 Query: 259 VHGVRVKASFPHWYK 273 G + + +YK Sbjct: 349 NKGAKAEIIDKKFYK 363 >gi|255528029|ref|ZP_05394865.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] gi|255508268|gb|EET84672.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] Length = 370 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 100/315 (31%), Gaps = 51/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F Sbjct: 52 SHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYFY 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121 L I+ D ++ +K +V II I P + ++ Sbjct: 112 LVINAGNIDKDFKWMMDHKDNLDVDIINISPDICEFAIQGPKAQMILQKVVNIDLENIKF 171 Query: 122 ----------IADVLLHRTWGHNEK-------IASDIKTY-------------------- 144 D ++ RT E + Sbjct: 172 FYCERNVKVNNVDCMISRTGYTGEDGFEIFCNAKDGESIWVKLLEVGKDDGLIPVGLGCR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P +A + + L + +IG+E + + + + + RK Sbjct: 232 DTLRFEACLPLYGNELT-EDISPLEAGIGFF--VKLNEDEFIGKEALMKQKSQGLKRKIA 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G + + EIG + LA+ + D + + + Sbjct: 289 GFEMKDRGIPRHGYKVQVNGEEIGFVTTGYKSPSLNKNIGLALIKSDYAALGKEIEIIIR 348 Query: 259 VHGVRVKASFPHWYK 273 G + + +YK Sbjct: 349 NKGAKAEIIDKKFYK 363 >gi|86610075|ref|YP_478837.1| aminomethyltransferase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558617|gb|ABD03574.1| aminomethyltransferase, putative [Synechococcus sp. JA-2-3B'a(2-13)] Length = 322 Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 106/306 (34%), Gaps = 64/306 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ------------------ 48 S +++ G + +L T ++ L + +TP Sbjct: 17 SGWGRLRMKGSPGLDYLHNRSTQNLKALQPGQGADTVFVTPTAGILDLATVYAGEEDCWI 76 Query: 49 --------------GKILLYFLISKIEEDT-----FILEIDRSKR--------DSLIDKL 81 G++L ++++++T F L +S+ + + +L Sbjct: 77 WTSPQRRSLLMQSLGRMLPLVRGAQLKDETDQTFGFGLLGPQSQALLEQVVSSEEIPTRL 136 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 + V I+ P++ + + F+ ID++ ++ + LL Sbjct: 137 NEHCA---VEIQGIPVHLACGTGLAQPGFTLWGTIDQKVALEECLLQAGAKLAPP----- 188 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + + LR+ G + + S P +A + +SL KGCY+GQEV+++ IR Sbjct: 189 ELWEVLRLEAGRPAADRELT-SDYNPLEAGL--WRAVSLDKGCYVGQEVLAKQVTYQRIR 245 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 + I + P G+ IL +IG L G L R +G+ + Sbjct: 246 QTLWGIRLQGEAHP-GTEILRQGEKIGLLTSAGLTSQGYLGLGYVRT---KFDPAEGLEV 301 Query: 258 TVHGVR 263 V Sbjct: 302 EVGSAP 307 >gi|294657445|ref|XP_459753.2| DEHA2E10318p [Debaryomyces hansenii CBS767] gi|218511960|sp|Q6BPW7|CAF17_DEBHA RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|199432698|emb|CAG87991.2| DEHA2E10318p [Debaryomyces hansenii] Length = 462 Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 64/191 (33%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R +G+ + S++ P + +DL NG+SL KGCY+GQE+ R + IIRKR + Sbjct: 269 RRRFMNGLFETQDSPKESSLLPFEMNLDLTNGLSLEKGCYVGQELTIRTYNNGIIRKRIV 328 Query: 206 IITGTD-----------------------------------------------DLPPS-- 216 I + D PP Sbjct: 329 PIQFFEINDDNLSALDESEYLTLDPNDPVIRELQDLHSSTLSKLEITPLIEKKDSPPPEP 388 Query: 217 ---GSPILTDDIEI-------GTLGVVVGKKALAIARIDKVD--HAIKKGMALTVHGVR- 263 S + + G L + +A + ++ K + GV+ Sbjct: 389 EQQSSSPFANSKPVRRRTASSGKLLSIQDNLGFVLANLSDIENVDLYKIELPCLEGGVKH 448 Query: 264 --VKASFPHWY 272 +K P W+ Sbjct: 449 VGIKVFKPEWW 459 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 57/168 (33%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITA-------------------------------- 29 S + N+S +++ G A FL + T+ Sbjct: 6 SGISALNRSLLQIKGPDATKFLNGLSTSRFLPNIVKKKQHTIDEAENRHAKLSEIININD 65 Query: 30 -------DVLTLPYK-----IARGSAILTPQGKILLYFLIS-------------KIEEDT 64 D+ S L+ +G+++ + +I E T Sbjct: 66 NWGLMHEDIYDPDNNIFVRRDGLNSMFLSSKGRVVTDCFLYSQPFHNLNGTFEGQISEPT 125 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +++EID S L L +KL + V IE +N F Sbjct: 126 YLIEIDSSFTSQLQMLLKLHKLSAKVSIETIKSMHSYYYYNDTAEFDE 173 >gi|218899387|ref|YP_002447798.1| glycine cleavage system T protein [Bacillus cereus G9842] gi|228902740|ref|ZP_04066887.1| Aminomethyltransferase [Bacillus thuringiensis IBL 4222] gi|228910060|ref|ZP_04073880.1| Aminomethyltransferase [Bacillus thuringiensis IBL 200] gi|228967267|ref|ZP_04128303.1| Aminomethyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|226711366|sp|B7IXL4|GCST_BACC2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|218541578|gb|ACK93972.1| glycine cleavage system T protein [Bacillus cereus G9842] gi|228792636|gb|EEM40202.1| Aminomethyltransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228849577|gb|EEM94411.1| Aminomethyltransferase [Bacillus thuringiensis IBL 200] gi|228856927|gb|EEN01440.1| Aminomethyltransferase [Bacillus thuringiensis IBL 4222] Length = 366 Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K ++N++++ P + E F ++ + + LL A + Sbjct: 172 KFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|150397398|ref|YP_001327865.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] gi|150028913|gb|ABR61030.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] Length = 815 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 58/314 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A+ FLQ + ++ + + +L +G I +++ E F Sbjct: 490 MTSFGKIRVEGRDALAFLQRLCANEMD-VEPGRVVYTQMLNARGGIESDLTVTRFSESAF 548 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSW-----------------NQ 106 L + + + L + LR V+ ++ V+ N+ Sbjct: 549 FLVVPGATLQRDLSWLRRH-LRDEFVVVTDVTAAESVLCVMGPKARDLMQKVSPNDFSNE 607 Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147 H F + R + L + ++ A +T Sbjct: 608 AHPFGTAREIEVGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLEAAGADAGLRLCGL 667 Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI D +A + + KG +IG+E V + + + R Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKSAKGEFIGREAVLAKRDKGLSR 724 Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA--IK 252 + ++ + L I+ D +GT+ G L A + Sbjct: 725 RLLQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVPCQGEGEADVLA 784 Query: 253 KGMALTVHGVRVKA 266 G + + G RVKA Sbjct: 785 SGYEIEIAGTRVKA 798 >gi|315658188|ref|ZP_07911060.1| glycine cleavage system T protein [Staphylococcus lugdunensis M23590] gi|315496517|gb|EFU84840.1| glycine cleavage system T protein [Staphylococcus lugdunensis M23590] Length = 363 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 108/310 (34%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A F+Q +++ D L A+ +A+ +G ++ +I K+E + ++ Sbjct: 53 SHMGEIAIKGNDASKFVQYLLSNDTNNLTDNKAQYTALCNEEGGVIDDLVIYKLENNDYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + D + + +V + + G + + S +D S Sbjct: 113 LIVNAANTDKDFTWIEKQSSKFDVTVSNVSDKYGQLAIQGPKARDLVSQLVDIDVSEMKP 172 Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148 V + ++ + + LR Sbjct: 173 FEFKQNVKLLGKNVILSQSGYTGEDGFEIYCDINDTVDIWNGLLEHDVVPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGITFAAKPLIEEDFIGKSVLKDQKENGSKRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 + + +G ++ D IG + K++A+A I++ + + + + + Sbjct: 286 VGLELLEKGIARTGYEVMDLDGNVIGEVTSGTQSPTSGKSIALAIINRDEFEMGRELLVQ 345 Query: 259 VHGVRVKASF 268 V ++KA Sbjct: 346 VRKRQLKAKI 355 >gi|119387638|ref|YP_918672.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222] gi|119378213|gb|ABL72976.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222] Length = 815 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 101/320 (31%), Gaps = 59/320 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + D+ +P + +L +G I ++++ E F Sbjct: 489 MTSFGKIRVEGRDAASFLQRLCANDMD-VPAGRIVYTQMLNARGGIESDLTVTRLSETAF 547 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 +L + + + L + V I VVL N+ Sbjct: 548 LLVVPGATLQRDLAWLRRHLGDEWVTITDITAAEVVLPLMGPRSRELLSLVSPGDFSNEA 607 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 H F + R + L + ++ A + E Sbjct: 608 HPFGTAREIEIGMGLARAHRVTYVGELGWELYVPTDQAAHVFEALAEAGEQVGLKLCGLH 667 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI D +A + + KG +IG+E V + + + R+ Sbjct: 668 AMDSCRIEKAYRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGREAVLKKREAGLERR 724 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA--------RIDK-VDHAIK 252 + + L PIL D +G L AL+ A R D+ + Sbjct: 725 LVQFRLRDPEPLLFHNEPILRDGRIVGFLSSGNYGHALSAAIGLGYVPCRTDETAAEMLA 784 Query: 253 KGMALTVHG--VRVKASFPH 270 A+ V G V +AS Sbjct: 785 SDYAIDVAGRIVPAEASLAP 804 >gi|47567783|ref|ZP_00238491.1| glycine cleavage system T protein [Bacillus cereus G9241] gi|47555460|gb|EAL13803.1| glycine cleavage system T protein [Bacillus cereus G9241] Length = 366 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F ++ + + LL K + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|126661608|ref|ZP_01732637.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece sp. CCY0110] gi|126617105|gb|EAZ87945.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece sp. CCY0110] Length = 212 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 8/123 (6%) Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + +LRI G P+ + P +A + + IS KGCYIGQE ++R+ +++R Sbjct: 78 WQQLRIKQGRPYPDQELT-EDYNPLEAGL--WSTISFDKGCYIGQETIARLNTYQGVKQR 134 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTV 259 + + +G I DD ++G L + LA + +K + T Sbjct: 135 LWGVKLNQPV-QTGHTITVDDKKVGILTSSAQVENECFGLAYVKTKVGGEGLKVNIGDTT 193 Query: 260 HGV 262 + Sbjct: 194 GEL 196 >gi|170754781|ref|YP_001780325.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum B1 str. Okra] gi|229807548|sp|B1IEV3|GCST_CLOBK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169119993|gb|ACA43829.1| glycine cleavage system T protein [Clostridium botulinum B1 str. Okra] Length = 370 Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 109/306 (35%), Gaps = 48/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A F+Q ++T D+ L + + G ++ L+ K E+ F Sbjct: 52 SHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAENEFF 111 Query: 67 LEIDRSKRDSLIDKLLFYK---------------------------LRSNVIIEIQPI-- 97 L I+ S +D + ++ +K L+ V I++Q I Sbjct: 112 LVINASNKDKDVKWIMDHKGDFDVEIVDESDSIAQLALQGPLAEEILQKIVDIDLQEIKF 171 Query: 98 ----NGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTW--GHNEKIAS-DIKTY 144 V+++ + ++ F I A L H G E + + Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGVQPIGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR ++ + TI P + M + + + +IG++ + + + + RK Sbjct: 232 DTLRFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349 Query: 261 GVRVKA 266 +KA Sbjct: 350 KKELKA 355 >gi|153939527|ref|YP_001390043.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum F str. Langeland] gi|166221547|sp|A7GB83|GCST_CLOBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|152935423|gb|ABS40921.1| glycine cleavage system T protein [Clostridium botulinum F str. Langeland] gi|295318127|gb|ADF98504.1| glycine cleavage system T protein [Clostridium botulinum F str. 230613] Length = 370 Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A F+Q ++T D+ L + + G ++ L+ K D F L I+ S Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAGDEFFLVINASN 118 Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90 + ++ K + F+KL+ +V Sbjct: 119 KDKDVKWIMGHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147 +++ + + E F I + A L H ++ + + L Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R ++ + TI P + M + + + +IG++ + + + I RK Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGITRKLVGFE 292 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352 Query: 264 VKA 266 +KA Sbjct: 353 LKA 355 >gi|172056926|ref|YP_001813386.1| glycine cleavage system T protein [Exiguobacterium sibiricum 255-15] gi|229807549|sp|B1YLN6|GCST_EXIS2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|171989447|gb|ACB60369.1| glycine cleavage system T protein [Exiguobacterium sibiricum 255-15] Length = 360 Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 112/304 (36%), Gaps = 48/304 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A+ FLQ ++ D+ + A+ + + G + L+ +++E ++ Sbjct: 53 SHMGELFVSGSDALAFLQQTLSNDISKIAIGQAQYNVLCQEDGGTVDDLLVYRLDEQDYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-PINGVVLSWN-------QEHTF-------- 110 L ++ S + L Y L +V++E Q G + QE T Sbjct: 113 LVVNASNIEKDEAHLRQY-LTGDVLLENQSDAYGQIAVQGPKAVEVLQELTALKLEDIKF 171 Query: 111 ---------------SNSSFIDER-----FSIADV-LLHRTWGHNEKIASDIKTYHELRI 149 S S + E AD + + + + LR Sbjct: 172 FRFAQGELAGVEMLVSRSGYTGEDGFELYMPSADASAVWNALLEADVVPCGLGARDTLRF 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + + +TI P +A M + ++G EV+ + + R++ + + Sbjct: 232 EACLPLYGHEL-SATISPIEAGMGF--AVKPQVKSFVGSEVLVKQKEDG-PRRQLIGLEL 287 Query: 210 TD-DLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 TD + +P+L + IG + KA+A+A + ++A ++ + V G ++ Sbjct: 288 TDKGIARQDAPVLVNGETIGFVTTGTLPPTIGKAIALA-LVPTEYATEETFEIEVRGKKL 346 Query: 265 KASF 268 A Sbjct: 347 AAKR 350 >gi|330950068|gb|EGH50328.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas syringae Cit 7] Length = 78 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 L+++ + V G A FLQ +T ++ L + A T +G++ F I + Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIVFEGDG 69 Query: 64 TFI 66 + Sbjct: 70 CLL 72 >gi|228941386|ref|ZP_04103938.1| Aminomethyltransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974319|ref|ZP_04134888.1| Aminomethyltransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980911|ref|ZP_04141215.1| Aminomethyltransferase [Bacillus thuringiensis Bt407] gi|228778847|gb|EEM27110.1| Aminomethyltransferase [Bacillus thuringiensis Bt407] gi|228785369|gb|EEM33379.1| Aminomethyltransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818312|gb|EEM64385.1| Aminomethyltransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942007|gb|AEA17903.1| glycine cleavage system aminomethyltransferase T [Bacillus thuringiensis serovar chinensis CT-43] Length = 366 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ + E F ++ + + LL A + Sbjct: 172 KFKNDILVDGISALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|289550692|ref|YP_003471596.1| Aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus lugdunensis HKU09-01] gi|289180224|gb|ADC87469.1| Aminomethyltransferase (glycine cleavage system T protein) [Staphylococcus lugdunensis HKU09-01] Length = 363 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 108/310 (34%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A F+Q +++ D L A+ +A+ +G ++ +I K+E + ++ Sbjct: 53 SHMGEIAIKGNDASKFVQYLLSNDTNNLTDNKAQYTALCNEEGGVIDDLVIYKLENNDYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + D + + +V + + G + + S +D S Sbjct: 113 LIVNAANTDKDFTWIEKQSSKFDVTVSNVSDKYGQLAIQGPKARDLVSQLVDIDVSEMKP 172 Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148 V + ++ + + LR Sbjct: 173 FEFKQNVKLLGKNVILSQSGYTGEDGFEIYCDINDTVDIWNGLLEHDVVPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSKRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 + + +G ++ D IG + K++AIA I++ + + + + + Sbjct: 286 VGLELLEKGIARTGYEVMDLDGNVIGEVTSGTQSPTSGKSIAIAIINRDEFEMGRELLVQ 345 Query: 259 VHGVRVKASF 268 V ++KA Sbjct: 346 VRKRQLKAKI 355 >gi|315426905|dbj|BAJ48525.1| glycine cleavage system aminomethyltransferase [Candidatus Caldiarchaeum subterraneum] Length = 360 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 94/299 (31%), Gaps = 56/299 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G A FLQ ++T DV L + IL G I+ + K+ +D++++ + Sbjct: 55 KISGPHATKFLQEVLTIDVEKLKPGRMKYGLILNMDGGIIDDVTVYKVTDDSYLMVSNAL 114 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----------------------T 109 R ++ L K+ V++E + + H T Sbjct: 115 TRVRVLGWL-REKMDGEVLVEDITESSAFFAVQGPHSSSYVSSLVGAVSGFKWFEGGFRT 173 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGI 153 + + R + + K + RI G Sbjct: 174 VDDCRLLVTRSGYTGGDGYELMTLCGEEQLYEKVWSFFTEKGVRPCGLACRDVCRIEAGF 233 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 DF P +A + + + K +IG+E + + Q ++K +I + Sbjct: 234 PLYGQDF-DEKNDPLEAGL--FWAVKMDKPFFIGKEALEKKQATGPVKKLSLIEMVDQGV 290 Query: 214 PPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 P G + D+E G + + + +A + +L V G V Sbjct: 291 PRPGYKVYVGDVEAGVVTSGCLSPMINRGVCLAYL---------PPSLQVDGYEVYVDV 340 >gi|294501228|ref|YP_003564928.1| glycine cleavage system T protein [Bacillus megaterium QM B1551] gi|294351165|gb|ADE71494.1| glycine cleavage system T protein [Bacillus megaterium QM B1551] Length = 366 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 103/314 (32%), Gaps = 50/314 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G ++ FLQ +T DV TL A+ +A+ G + LI K + ++ Sbjct: 53 SHMGEILVTGADSLAFLQHTMTNDVSTLVDGKAQYTAMCYEDGGTVDDLLIYKKADQEYL 112 Query: 67 LEIDRSKRDSLIDKLLFYK---------------------LRSNVIIEIQPINGVVL--- 102 L ++ + + L+ +K + V+ + N +L Sbjct: 113 LVVNAANIQKDYEWLVSHKQGDVMLVNQSDETAQLALQGPVAEKVLQTLTNENLSLLKPF 172 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASD-------IKTYH 145 ++ + +N + R W + SD + Sbjct: 173 TFADDVEVANVKALVSRTGYTGEDGFEIYCSSADASHLWTAILEAGSDEGVLPCGLGARD 232 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR + + I P +A + + K +IG+EV+ + RK Sbjct: 233 TLRFEATLALYGQEL-SKDITPIEARIGF--AVKTNKDSFIGKEVLKEQRESGAPRKLVG 289 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259 I +P G + D+ +IG + LA+ + + + + + Sbjct: 290 IEMIDKGIPRHGYEVFADEEQIGFVTTGTQSPTLKKNIGLALLSAEYSELGREVEVQVRK 349 Query: 260 HGVRVKASFPHWYK 273 ++ K +YK Sbjct: 350 KRLKAKVVSTPFYK 363 >gi|229592286|ref|YP_002874405.1| putative glycine cleavage system protein T [Pseudomonas fluorescens SBW25] gi|229364152|emb|CAY51794.1| putative aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas fluorescens SBW25] Length = 374 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 100/310 (32%), Gaps = 51/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +A L+ ++ D++ LP + R + QG IL +++ + D Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNAQGGILDDLMVANLGNDELF 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + + IE +L+ + + + Sbjct: 115 LVVNAACKDQDLAHLRQH-IGDQCSIEPLFEERALLALQGPAAVKVLARLAPEVTQMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L E A + LR+ Sbjct: 174 QFASLRLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D NTD P A+ G + G + + Q + RKR Sbjct: 234 EAGLCLYGHDMNTDTTPIEASLLWAISKARRADGPRAGGFPGADTIFTQQQAGVSRKRVG 293 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D IG++ G LA+ +D A+ ++ Sbjct: 294 LLPQERTPVREGAEIVDADGTVIGSVCS--GGFGPTLGGPLAMGYLDSAFIALDTEVSAL 351 Query: 259 VHGVRVKASF 268 V G +V Sbjct: 352 VRGKKVPLRV 361 >gi|196041531|ref|ZP_03108823.1| aminomethyltransferase [Bacillus cereus NVH0597-99] gi|196027519|gb|EDX66134.1| aminomethyltransferase [Bacillus cereus NVH0597-99] Length = 366 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84 L I+ S + + ++ F+ Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 K +++++++ P + E F E + L + Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYC-KSEGAAKLWEKLLEVGAEEGLKPCGLGAR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+ + + RK Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347 Query: 260 HGVRVKASF 268 RVKA Sbjct: 348 RNKRVKAVV 356 >gi|212638758|ref|YP_002315278.1| glycine cleavage system aminomethyltransferase T [Anoxybacillus flavithermus WK1] gi|226711364|sp|B7GH71|GCST_ANOFW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|212560238|gb|ACJ33293.1| Glycine cleavage system protein T (aminomethyltransferase) [Anoxybacillus flavithermus WK1] Length = 364 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V GK ++ FLQ ++T DV L A+ + + G + L+ K +D ++ Sbjct: 50 SHMGEFEVKGKDSVAFLQKMMTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADDHYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L ++ + + L + + +V + + L+ T Sbjct: 110 LVVNAANIEKDFAWLSEHVV-GDVELVNISNDIAQLALQGPLAEKVLQQLTTVDLSTMKF 168 Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144 +F D R A L ++ + + Sbjct: 169 FAFADHVDVAGVQTLVSRTGYTGEDGFELYCRAEDAPTLWRAILEAGKEEGVLPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K + G+E++ + + R+ Sbjct: 229 DTLRFEACLPLYGQELAKD-ITPIEAGLGF--AVKTNKDVDFFGKEILKKQKEEGAPRRL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I + G + ++ +IG + LA+ I ++ + + Sbjct: 286 VGIEMIDKGIARHGYAVYVNNEQIGFVTTGTQSPTLKKNIGLAL--ISTAFSSLDTEVEV 343 Query: 258 TVHGVRVKASF 268 V G R+KA Sbjct: 344 DVRGKRLKARV 354 >gi|313497352|gb|ADR58718.1| GcvT [Pseudomonas putida BIRD-1] Length = 373 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L++++ D++ LP + R + QG IL +++ + +DT Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + +D + L + ++ +Q V + + +F+ Sbjct: 114 LVVNAACKDQDLAHLQSHIGNRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R + AD L R E + LR+ Sbjct: 174 FRRVTLLEVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206 G+ D T +L+ ++ + G + G E + Q + RKR + Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRADGARAAGFPGAEAIFTQQRDGVARKRVGL 293 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ +D +G + G +A+ ID A+ + V Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLGAPVAMGYIDSEHSALDTPLFAVV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKKVALKV 360 >gi|154249658|ref|YP_001410483.1| glycine cleavage system aminomethyltransferase T [Fervidobacterium nodosum Rt17-B1] gi|154153594|gb|ABS60826.1| glycine cleavage system T protein [Fervidobacterium nodosum Rt17-B1] Length = 430 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 86/257 (33%), Gaps = 46/257 (17%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ F ++T D ++ Y +A+ G + L+ KI + + ++ + D Sbjct: 127 GPDAVKFANYVVTNDFGSINYGDIIYTAMCNENGGFVDDLLVYKIAPEEVMFVVNAANID 186 Query: 76 SLIDKLLFYKLRSNVIIE---IQPINGVVLSWN---QEHTFSNSSF-------------- 115 + LL KL ++ I G++ QE + +F Sbjct: 187 KDFNHLL--KLSEKFNVKLTNISDETGLIAVQGPKAQEKIQPHVNFDLEEIGYYSFKKGE 244 Query: 116 ------IDERFSIADV-------------LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 I R + R + + LR+ G++ Sbjct: 245 IFGVRGIISRTGYTGEDGFELYIPANQTSFVWRKLLEIGVKPAGLGARDVLRLEAGLLLY 304 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D TI P +A + + KG + G+EV+ + + +++R + L P Sbjct: 305 GNDM-DDTITPLEASIPW--AVKFEKGDFFGKEVLLKQKEEG-LKRRLRGLVIEGKLVPR 360 Query: 217 GS-PILTDDIEIGTLGV 232 + + D +IG + Sbjct: 361 HNMEVYKDGQKIGYVTS 377 >gi|148546266|ref|YP_001266368.1| glycine cleavage system T protein [Pseudomonas putida F1] gi|148510324|gb|ABQ77184.1| glycine cleavage system T protein [Pseudomonas putida F1] Length = 373 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L++++ D++ LP + R + QG IL +++ + EDT Sbjct: 54 SHMGQIVLRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + ++ + L + ++ +Q V + + +F+ Sbjct: 114 LVVNAACKEQDLAHLQSHIGNRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R + AD L R E + LR+ Sbjct: 174 FRRVTLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206 G+ D T +L+ ++ + +G + G E + + RKR + Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRAEGARAASFPGAETIFAHVRDGVARKRVGL 293 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ +D +G + G +A+ ID A+ + V Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLAAPVAMGYIDSEHAALDTALFAVV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKKVALKV 360 >gi|300932485|ref|ZP_07147741.1| putative aminomethyltransferase [Corynebacterium resistens DSM 45100] Length = 427 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +++ I V G+ A +L +I+ + + A +L QG++ F I+ + D +L Sbjct: 52 DRTAILVKGEEAHTWLNDLISQKINAINTGQATYGLLLDVQGRVTHQFGIAALP-DGILL 110 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98 + L D L + V +EI P+ Sbjct: 111 DCPSRHAAGLADYLTKMIFWAKVEVEILPLA 141 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 30/157 (19%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM------------------DLLNGISLTKGC 184 Y LRI I + D PH+A + + KGC Sbjct: 249 AYDALRIAARIPEVGID-TDEKTIPHEAAFFTGPRTAQATTLGSVSDGPTAYAVHMNKGC 307 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GK 236 Y GQE VSR+Q+ + +++ LP GS + IG +G G Sbjct: 308 YRGQETVSRVQNLGKPPRVLVLLHLDGSANRLPAVGSDFTAEGKTIGRVGSSAHDGDLGP 367 Query: 237 KALAIAR---IDKVDHAIKKGMALTVHGVRVKASFPH 270 ALA+ + ++K+ + AL GV Sbjct: 368 IALALVKRGIVEKLASNPQSAPALQADGVDAAIDPAD 404 >gi|284167360|ref|YP_003405638.1| glycine cleavage system protein T [Haloterrigena turkmenica DSM 5511] gi|284017015|gb|ADB62965.1| glycine cleavage system T protein [Haloterrigena turkmenica DSM 5511] Length = 366 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 110/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEEDTF 65 S+ S + V G A + + T DV TL A+ S IL +G IL ++ + + D + Sbjct: 51 SHMSEVVVTGPDATAIMDRLTTNDVQTLDSGDAQYSCILDEEGVILDDTVVYRYPDGDGY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQ-PINGVVLSWNQEH------------ 108 + + + + ++ Y S V +E Q G+V + Sbjct: 111 LFVPNAGHGEQMAERWSQYA--SEFGLSVTVENQTDSTGLVAVQGPDSVETVEAVTSDPV 168 Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEK------IASDIKT-YHE-------------- 146 S S+ + + + RT E ASD + + Sbjct: 169 GELSQFSWRQTEIAAVECHVARTGYTGEDGYEIFFPASDSEAVWEAFEDIQPCGLGARDT 228 Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ DF P P +A + + + L+K ++G+E + ++ + + Sbjct: 229 LRLEAGLLLSGQDFDPEDEPRTPLEAGLGFV--VDLSKDEFVGRETLQDLEEAGVEERMV 286 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260 I + G IL D EIG + L A+ ++ + + V Sbjct: 287 GIRIDERAIARHGYSILADGTEIGHVTSGTMGPTLNVPIALGYVETPFAETGTEIEVEVR 346 Query: 261 GVRVKASF 268 G V+A+ Sbjct: 347 GEPVEATV 354 >gi|119505788|ref|ZP_01627855.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080] gi|119458355|gb|EAW39463.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080] Length = 394 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 62/274 (22%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A +L ++T +V L + G+++ I ++ E F L Sbjct: 66 RITGPDAEAYLNRMVTRNVSKLGINRVGYAVWCNDAGQVMDDGTIFRLGEQDFRL-CSYQ 124 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------------ 108 + D + L +V I + + L+ Sbjct: 125 RADDWLAWCT---LGFDVTITNESEDLAGLAVQGPTSCTILTLLGCTGLDQLKPFGIAHF 181 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL--------------------R 148 TF + + R L + W A + +L R Sbjct: 182 TFEGAPMMVSRTGFTGDLGYEVWV---APAQAEALWDQLFEHGREYLIKPIGSYALDMAR 238 Query: 149 INHGIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 I G + + DF+P+ P + ++ L + +K + G+ + + + Sbjct: 239 IEAGFIQAHVDFVPAEEVVRNGRTRSPFELGLEWL--VDFSKPLFNGRSALLAEKAKGS- 295 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R R ++ + P S I+ D +GT+ Sbjct: 296 RYRFAMLDIEGNKPAEHSFIMKGDKVVGTVTSAA 329 >gi|241953047|ref|XP_002419245.1| mitochondrial protein, putative [Candida dubliniensis CD36] gi|223642585|emb|CAX42834.1| mitochondrial protein, putative [Candida dubliniensis CD36] Length = 469 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R +G+ + S++ P + +D +NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 RRRFQNGLFEIQDAPKGSSLLPFECNLDYINGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333 Query: 206 IITG 209 + Sbjct: 334 PVQF 337 Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 57/160 (35%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29 ++S IK+ G A FL ++T+ Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSQNYGLMH 71 Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70 D+ Y S IL +G+++ + I E ++LE+D Sbjct: 72 EDIYDPDYNITISRDGVNSMILNSKGRVVTDCFLYPDPFHNVDGTFQESINEPGYLLEVD 131 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 +S L+ L +KL + V I ++ TF Sbjct: 132 KSISQQLMMILKLHKLSAKVDIIPDKKLHSYYYYDDTSTF 171 >gi|196230599|ref|ZP_03129461.1| glycine cleavage system T protein [Chthoniobacter flavus Ellin428] gi|196225529|gb|EDY20037.1| glycine cleavage system T protein [Chthoniobacter flavus Ellin428] Length = 349 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 60/313 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ G A+ +L ++T +V L + + +L G ++ ++ +I E+ ++ Sbjct: 33 SHMGQFFAEGPGALAWLNGLLTNNVERLAVGECQYTFLLNDGGGVIDDLIVYRIGEENYL 92 Query: 67 LEIDRSKRDSLIDKLL------------------------------------FY------ 84 L ++ K D + Y Sbjct: 93 LVVNAGKIDEDFAWMKSHLAPGVDFQNRSADFAGLAVQGPRSAQLFDAFFQGKYSRPARN 152 Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 LR+ +I+ + + E F + R + + R + + Sbjct: 153 EILRA--VIDDETYFIARTGYTGEDGFEVFCVAN-RAVKSWNDILRKGAEFDIKPCGLGA 209 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ +D LP T P +A + + + L K +IG++ +++ + +++R Sbjct: 210 RDTLRLEMCYPLNGSDLLPDTT-PIEAGLSIF--VDLQKPNFIGKDALTKQRQEG-VKRR 265 Query: 204 PMIITGTDDLPPSGS--PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 + T+ PP S + D +I +A + I + + Sbjct: 266 LVPFKMTETCPPPRSHYAVYKGDKKIAETTSGTLSPTLKVGIGMAYIPTEFAR--INEQI 323 Query: 256 ALTVHGVRVKASF 268 + + G R A+ Sbjct: 324 EIEIRGRRFPATI 336 >gi|70726380|ref|YP_253294.1| glycine cleavage system aminomethyltransferase T [Staphylococcus haemolyticus JCSC1435] gi|123660300|sp|Q4L6N7|GCST_STAHJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|68447104|dbj|BAE04688.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 363 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 109/310 (35%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++ Sbjct: 53 SHMGEISIKGNDASKFVQYLLSNDTNNLTDTKAQYTALCNEEGGIIDDLVTYKIGDNDYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + D + + + +V + + G + + S +D S Sbjct: 113 LIVNAANTDKDFAWVQKHAPKFDVEVSNVSNQFGQLAVQGPKARDLVSGLVDIDVSEMKP 172 Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148 V + + + + + LR Sbjct: 173 FDFQQNVTLFGKNVILSQSGYTGEDGFEIYCEAKDTVDIWNGFIEHNVVPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSERRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G P+L D EIG + K++A+A I + + + + + + Sbjct: 286 VGLELLDKGIARTGYPVLDLDGNEIGEVTSGTQAPSSGKSIAMAIIKRDEFEMGRELLVQ 345 Query: 259 VHGVRVKASF 268 V ++KA Sbjct: 346 VRKRQLKAKI 355 >gi|239827700|ref|YP_002950324.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp. WCH70] gi|259647493|sp|C5D4A2|GCST_GEOSW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|239807993|gb|ACS25058.1| glycine cleavage system T protein [Geobacillus sp. WCH70] Length = 364 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 98/311 (31%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G ++ FLQ ++T DV L + S + G + LI K + ++ Sbjct: 50 SHMGEFVVKGDDSLAFLQKMMTNDVSKLTDGRVQYSLMCYEDGGTVDDLLIYKKADGHYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112 L ++ + + + L + L +V + L+ Sbjct: 110 LVVNAANIEKDFEWLHGH-LFGDVELVNISQEIAQLALQGPLAEQVLQKLTNTDLSAIKF 168 Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144 SF D+ R A L ++ + + Sbjct: 169 FSFQDDININGVKALVSRTGYTGEDGFEIYCRREDAVALWESILEAGKEEGVLPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IG++V+ + + RK Sbjct: 229 DTLRFEATLPLYGQEL-SKDITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + + EIG + LA+ + + + + + + Sbjct: 286 VGIEMIDKGIPRHGYKVFANGEEIGFVTTGTQSPTLKKNIGLALIKTEFTE--MDTEVEV 343 Query: 258 TVHGVRVKASF 268 + G R+KA Sbjct: 344 EIRGKRLKAKV 354 >gi|320322885|gb|EFW78976.1| glycine cleavage system T protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329806|gb|EFW85794.1| glycine cleavage system T protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 374 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D NTD P A+ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMNTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + IGT+ G LA+ ++ A+ + Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|295399150|ref|ZP_06809132.1| glycine cleavage system T protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978616|gb|EFG54212.1| glycine cleavage system T protein [Geobacillus thermoglucosidasius C56-YS93] Length = 364 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 101/311 (32%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G ++ FLQ ++T DV L A+ + + G + L+ K + ++ Sbjct: 50 SHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADGHYL 109 Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84 L ++ + + ++ K L F+ Sbjct: 110 LVVNAANIEKDFAWLNEHLIGDVELADVSQETAQLALQGPLAEQVLQKLTNIDLSELKFF 169 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 + NV ++ + E F ++ ++ + +L + + Sbjct: 170 AFQDNVYLQEVKALISRTGYTGEDGFEIYCRAEDAVALWEAILA-AGKEEGVLPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IG++V+ + + RK Sbjct: 229 DTLRFEAALPLYGQELAKD-ITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + + EIG + LA+ + + D I + + Sbjct: 286 VGIEMMDKGIPRHGYKVFANGEEIGFITTGTQSPTLKKNIGLALIKSEFTD--INAEVEV 343 Query: 258 TVHGVRVKASF 268 + G +KA Sbjct: 344 EIRGKHLKAKV 354 >gi|255726752|ref|XP_002548302.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404] gi|240134226|gb|EER33781.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404] Length = 468 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 36/66 (54%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R +G+ + +++ P + +D +NG+SL KGCY+GQE+ R + +IRKR Sbjct: 270 RRRFENGVFETQDAPKGTSLLPFECNLDYVNGLSLDKGCYVGQELTIRSFNNGVIRKRIF 329 Query: 206 IITGTD 211 + + Sbjct: 330 PVQFFE 335 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 58/146 (39%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-----------------------------DVLTL---- 34 +++ I + G A FL +IT+ DV Sbjct: 12 SKTLITIRGPDATKFLNGLITSRLLPNIVKKKQHTISESEENRNVNLSEIIDVSKNYGLI 71 Query: 35 ------PYK------IARGSAILTPQGKILLYFLISK-------------IEEDTFILEI 69 P S IL +G+++ + +E+ F+LE+ Sbjct: 72 HEDIYDPDGTITISRDGINSMILNSKGRVVTDCFLYPEPFHNLDGMFDKEMEQPGFVLEV 131 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQ 95 D S L+ L +KL + V I Sbjct: 132 DSSISSQLMMLLKLHKLSAKVDISPD 157 >gi|56420960|ref|YP_148278.1| glycine cleavage system aminomethyltransferase T [Geobacillus kaustophilus HTA426] gi|61213222|sp|Q5KX76|GCST_GEOKA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56380802|dbj|BAD76710.1| glycine cleavage system T protein, aminomethyltransferase [Geobacillus kaustophilus HTA426] Length = 364 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++ Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86 L ++ + + ++ +L + L Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169 Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 ++ +E+ + +V + E F ++ ++ + +L + + + Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDSVLPCGLGA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR + + +I P +A + + K +IGQ V+ R + R+ Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKETPFIGQAVLKRQKEEGPPRR 284 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 I +P G + D E+G + LA+ + D AI + + Sbjct: 285 LVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342 Query: 257 LTVHGVRVKASF 268 + + G R+KA+ Sbjct: 343 VDIRGKRLKANI 354 >gi|168183383|ref|ZP_02618047.1| aminomethyltransferase [Clostridium botulinum Bf] gi|237794017|ref|YP_002861569.1| glycine cleavage system aminomethyltransferase T [Clostridium botulinum Ba4 str. 657] gi|259647489|sp|C3L1M5|GCST_CLOB6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|182673558|gb|EDT85519.1| aminomethyltransferase [Clostridium botulinum Bf] gi|229261446|gb|ACQ52479.1| glycine cleavage system T protein [Clostridium botulinum Ba4 str. 657] Length = 370 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 100/306 (32%), Gaps = 48/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A F+Q ++T D+ L + + G ++ L+ K ED F Sbjct: 52 SHMGEATVKGKDAQKFVQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFF 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L I+ S +D + +L +K +V I ++ + +D Sbjct: 112 LVINASNKDKDVKWILDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKF 171 Query: 123 -----------ADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFL--- 161 L+ RT E K +H + +N G + Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAI-LNAGKEEGAQPIGLGA 230 Query: 162 -----------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 TI P + M + + + +IG++ + + + + RK Sbjct: 231 RDTLRFEASLLLYGNEMDETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 +P G ++ D IG + KA+ +A +++ I + V Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349 Query: 261 GVRVKA 266 +KA Sbjct: 350 KKELKA 355 >gi|150021749|ref|YP_001307103.1| glycine cleavage system aminomethyltransferase T [Thermosipho melanesiensis BI429] gi|166221576|sp|A6LP67|GCST_THEM4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|149794270|gb|ABR31718.1| glycine cleavage system T protein [Thermosipho melanesiensis BI429] Length = 363 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 93/282 (32%), Gaps = 46/282 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK + F+ +IT D L +A+ G + L KI E+ + Sbjct: 49 SHMGEVIVEGKDSTKFVDFLITNDFKNLKPGEIVYTAMCNENGGFVDDLLAYKISEEKAM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108 L I+ S + + +V +E + V+++ + Sbjct: 109 LVINASNIEKDFSWMKKISESFDVTLENKSDEYVLIAVQGPNAQKTLQKITNVDLEQIGY 168 Query: 109 -TFSNSSFID-----ERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELR 148 TF+ + +D R + + + + I + + LR Sbjct: 169 YTFTEGNVLDIKAIISRTGYTGEDGFEIYTTDKDGIIKIWKKLLNLNVIPAGLGARDCLR 228 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + ++ D TI P + + + K ++G+E + R R+ Sbjct: 229 LEASLLLYGNDM-DETITPLEVGIKW--AVKFEKD-FMGKEALKRQLEEGTSRRLKGFKI 284 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246 + G + D EIG + +A+ +A I+K Sbjct: 285 IDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEK 326 >gi|238880768|gb|EEQ44406.1| conserved hypothetical protein [Candida albicans WO-1] Length = 469 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333 Query: 206 IITG 209 + Sbjct: 334 PVQF 337 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29 ++S IK+ G A FL ++T+ Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSKNYGLMH 71 Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70 D+ Y S IL +G+++ + + E ++LE+D Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDGVFQESMNEPGYLLEVD 131 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 S L+ L +KL + V I ++ TF Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171 >gi|68471677|ref|XP_720145.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] gi|46442000|gb|EAL01293.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] Length = 469 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333 Query: 206 IITG 209 + Sbjct: 334 PVQF 337 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29 ++S IK+ G A FL ++T+ Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSKNYGLMH 71 Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70 D+ Y S IL +G+++ + + E ++LE+D Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDWVFQESMNEPGYLLEVD 131 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 S L+ L +KL + V I ++ TF Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171 >gi|68471940|ref|XP_720013.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] gi|74591236|sp|Q5AEF0|CAF17_CANAL RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|46441863|gb|EAL01157.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314] Length = 469 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 + R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333 Query: 206 IITG 209 + Sbjct: 334 PVQF 337 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%) Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29 ++S IK+ G A FL ++T+ Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNFSEIIDVSKNYGLMH 71 Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70 D+ Y S IL +G+++ + + E ++LE+D Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDGVLQESMNEPGYLLEVD 131 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 S L+ L +KL + V I ++ TF Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171 >gi|330938936|gb|EGH42435.1| glycine cleavage system T protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 374 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIETLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISRVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240 ++ G+ I+ + IGT+ +LA Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329 >gi|167032006|ref|YP_001667237.1| glycine cleavage system T protein [Pseudomonas putida GB-1] gi|166858494|gb|ABY96901.1| glycine cleavage system T protein [Pseudomonas putida GB-1] Length = 373 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 105/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L++++ D++ LP + R + QG IL +++ + +DT Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK--------LRSN-VIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + +D + L + L ++ +Q V + + +F+ Sbjct: 114 LVVNAACKDQDLAHLQTHIGGRCEVQPLFEQRALLALQGPAAVKVLERLAPEVAGMTFMQ 173 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R A+ L R E + LR+ Sbjct: 174 FRPVKLLGEDCFVSRSGYTGEDGYEISVPVQGAEALARRLLAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206 G+ D T +L+ ++ + +G + G E + Q + RKR + Sbjct: 234 AGLCLYGHDMNTETTPIEASLLWAISKVRRAEGARAAGFPGAEAIFAHQREGVARKRVGL 293 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ +D +G + G +A+ I+ A+ + V Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLGAPVAMGYIESEHAALDTPLFAVV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKKVALKV 360 >gi|294102561|ref|YP_003554419.1| glycine cleavage system T protein [Aminobacterium colombiense DSM 12261] gi|293617541|gb|ADE57695.1| glycine cleavage system T protein [Aminobacterium colombiense DSM 12261] Length = 363 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 88/268 (32%), Gaps = 47/268 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A +LQ ++T D+ + + + P G ++ L+ K+ + + Sbjct: 50 SHMGEVRVAGPKAEAWLQNMMTNDITAMENGQVIYTFMCYPNGGVVDDLLVYKVSTENYF 109 Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84 L I+ S K + ++ K L F+ Sbjct: 110 LVINASNTDKDVLWFHDHVTEGVTVENLSPQYSELALQGPKAEEILKKIANFDPASLGFF 169 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 + NV + + E F DE + D ++ + + + + Sbjct: 170 RFVENVKVAGVDALVSRTGYTGEDGFEIYMPWDEGAPVWDAVM-KAGEEFGILPAGLGCR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G+ + + I P +A + ++ +IG+ ++ ++ + RK Sbjct: 229 DSLRFEAGLPLYGHELA-AYITPLEAGLGFFVKLNTE---FIGRHALAALKENGVPRKIV 284 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGV 232 + +P + +G + Sbjct: 285 GLEMIDKGIPREQYEVRAQGRTVGRVTT 312 >gi|71736569|ref|YP_273428.1| glycine cleavage system T protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557122|gb|AAZ36333.1| glycine cleavage system T protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 374 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +TD P A+ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + IGT+ G LA+ ++ A+ + Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|218234823|ref|YP_002369032.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus B4264] gi|226711367|sp|B7HBA0|GCST_BACC4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|218162780|gb|ACK62772.1| aminomethyltransferase [Bacillus cereus B4264] Length = 366 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 105/308 (34%), Gaps = 49/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------ 120 L I+ S + + L + + ++ + + + + E Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171 Query: 121 -SIADVLL---------------------------HRTWGHNEKIASD-------IKTYH 145 D+L+ + W ++ ++ + Sbjct: 172 KFKKDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR + + I P +A + + K + G+ + + RK Sbjct: 232 TLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKLV 288 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 I +P + P+ + +IG + KK++ +A ID A+ + + + Sbjct: 289 GIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIR 348 Query: 261 GVRVKASF 268 RVKA Sbjct: 349 NKRVKAVV 356 >gi|257487382|ref|ZP_05641423.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330989710|gb|EGH87813.1| glycine cleavage system T protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009021|gb|EGH89077.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 374 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVKLLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +TD P A+ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + IGT+ G LA+ ++ A+ + Sbjct: 294 LLPEERTPVREGTEIVDEQGTVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|88799063|ref|ZP_01114644.1| aminomethyltransferase [Reinekea sp. MED297] gi|88778290|gb|EAR09484.1| aminomethyltransferase [Reinekea sp. MED297] Length = 363 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 99/283 (34%), Gaps = 45/283 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A FLQ ++ DV L A +A+L PQG ++ ++ +++E + Sbjct: 50 SHMTIVDILGDDAQAFLQKLLANDVAKLKTPGKALYTAMLNPQGGVIDDLIVYRLDE-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 ++ + R+ ++ + V I+ + +V + + + E Sbjct: 109 RTVVNCATREKDLEWIQQQATDMAVTIKERDDLAMVAIQGPQSVEKATVALGEEHGPIAN 168 Query: 121 --------SIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149 D + RT N + LR+ Sbjct: 169 QVKPFQGLPSGDWFIARTGYTGEDGLEVMVPNNEVTDFWSRLLDNGVQPCGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D P ++ M + ++G++ +++++ + RK ++ Sbjct: 229 EAGMNLYGNDM-DEQTHPLESGMAWTVAWEPEERDFMGRDALTKLREQGGYRKLIGLVLE 287 Query: 210 TDDLPPSGSPILT--DDIEIGTLGVVVG----KKALAIARIDK 246 + + + D IG + +++A+ARID+ Sbjct: 288 QRGVMRAHQTLHASEDGPAIGEITSGTFSPTLNQSIAMARIDR 330 >gi|314936342|ref|ZP_07843689.1| glycine cleavage system T protein [Staphylococcus hominis subsp. hominis C80] gi|313654961|gb|EFS18706.1| glycine cleavage system T protein [Staphylococcus hominis subsp. hominis C80] Length = 363 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 57/311 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G++A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++ Sbjct: 53 SHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYL 112 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123 L ++ + D + + + K + V + G + + S +D S Sbjct: 113 LIVNAANTDKDFEWIQKHQSKFNAAVT-NVSEQYGQLAIQGPQARTLVSELVDVDVSEMK 171 Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147 V + + + + L Sbjct: 172 PFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGVVPCGLGARDTL 231 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRK 202 R+ G+ D +I P++ GI + +IG+ V+ + R+ Sbjct: 232 RLEAGLPLHGQDLT-ESITPYE------GGIGFAAKPLIEDEFIGKSVLKNQKENGSKRR 284 Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 + + +G ++ D EIG + K++A+A ID+ + + K + + Sbjct: 285 TVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLV 344 Query: 258 TVHGVRVKASF 268 V ++KA Sbjct: 345 QVRKRQLKAKI 355 >gi|258648548|ref|ZP_05736017.1| glycine cleavage system T protein [Prevotella tannerae ATCC 51259] gi|260851321|gb|EEX71190.1| glycine cleavage system T protein [Prevotella tannerae ATCC 51259] Length = 361 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 108/299 (36%), Gaps = 50/299 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G+ A ++Q I T D+ + +L P G + L+ K E F+ Sbjct: 50 SHMGEVSVTGEEAERYVQHIFTNDIKSATIGSVFYGMMLYPNGGTVDDLLVYKNGEQDFL 109 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN--------VII---EIQPINGVVLSWN-QEHTF 110 L I+ + D + ++ + + + + I E + I G VL ++ F Sbjct: 110 LVINAANIDKDYAWIEEQAKGFNVTTKNLSESYGQLAIQGPEAEEIVGSVLGLECKDLAF 169 Query: 111 SNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 +D R +G+++ I I+ + + Sbjct: 170 YTFKTLDNNEVPAILSRTGYTGEDGFELYGNHDFI---IECWDKLIAAGVQPCGLGCRDT 226 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR G+ + P P + + + + L K +IG+E ++ + + +K I Sbjct: 227 LRFEVGLPLYGDELSPEIS-PVMSGLSMF--VKLDKEEFIGKEACAKQKAEGVEKKVVGI 283 Query: 207 ITGTDDLPPSGSPILTDDIEIGTL----GVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 + +P G + D +G + + K++ +A +D + + + +H Sbjct: 284 ELASRAIPRHGYEVEKDGKVVGEITTGYRSISTGKSICMALVDISAAKLGTELQVKIHN 342 >gi|325278202|ref|ZP_08143697.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51] gi|324096663|gb|EGB95014.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51] Length = 373 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G +A L++++ D++ LP + R + QG IL +++ + +D Sbjct: 54 SHMGQIILHGANAAKALESLVPVDIIDLPVGMQRYAMFTDAQGGILDDLMVANLGDDKLF 113 Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + + + L ++ R+ ++ +Q + +N +F Sbjct: 114 LVVNAACKAQDLAHLQAQIGNACDVQPLFEARA--LLALQGPAAAHVLARLAPEVANMTF 171 Query: 116 IDER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELR 148 + R A+ L R E + LR Sbjct: 172 MQLREVKLLGEDCFVSRSGYTGEDGYEISVPAGAAEALARRLLAEPEVQPIGLGARDSLR 231 Query: 149 INHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + G+ D N++ P A+ + G + G E + Q + RKR Sbjct: 232 LEAGLCLYGHDMNSETTPVEASLLWAISKVRRADGQRAGGFPGAEAIFTQQRDGVARKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259 ++ G+ I+ +D +G + L A+ ID AI + V Sbjct: 292 GLLPQERTPVREGADIVDANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHAAIDTALFAVV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKKVALKV 360 >gi|312110247|ref|YP_003988563.1| glycine cleavage system protein T [Geobacillus sp. Y4.1MC1] gi|311215348|gb|ADP73952.1| glycine cleavage system T protein [Geobacillus sp. Y4.1MC1] Length = 364 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G ++ FLQ ++T DV L A+ + + G + L+ K + ++ Sbjct: 50 SHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADGHYL 109 Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84 L ++ + + ++ K L F+ Sbjct: 110 LVVNAANIEKDFAWLNEHLIGDVELADVSRETAQLALQGPLAEQVLQKLTNIDLSALKFF 169 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 + NV ++ + E F ++ ++ + +L + + Sbjct: 170 AFQDNVYLQEVKALISRTGYTGEDGFEIYCRAEDAVALWEAILA-AGKEEGVLPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR + + I P +A + + K +IG++V+ + + RK Sbjct: 229 DTLRFEAALPLYGQELAKD-ITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + + EIG + LA+ + + + I + + Sbjct: 286 VGIEMMDKGIPRHGYKVFANGEEIGFITTGTQSPTLKKNIGLALIKSEFTE--INAEVEV 343 Query: 258 TVHGVRVKASF 268 + G +KA Sbjct: 344 EIRGKHLKAKV 354 >gi|307303428|ref|ZP_07583182.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] gi|306902819|gb|EFN33411.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C] Length = 825 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 51/282 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + V G+ A L I ADV + + + +L +G + ++ D F+ Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546 Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99 + ++ D + Y + + + G Sbjct: 547 IVTGSAQAVHDADWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARNILGRITSADLSNAG 606 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145 + +E ++ R + L +E + H Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666 Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201 LRI G + + P I PH+A + +S K G +IG+E + R +H Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKHAGAPV 723 Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241 +R + T D P G IL D +G + L + Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765 >gi|300710718|ref|YP_003736532.1| glycine cleavage system aminomethyltransferase T [Halalkalicoccus jeotgali B3] gi|299124401|gb|ADJ14740.1| glycine cleavage system aminomethyltransferase T [Halalkalicoccus jeotgali B3] Length = 360 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 89/312 (28%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A LQ + T DV +L A+ S I +G IL +I ++ E+ F+ Sbjct: 51 SHMGEIEVSGPDAATLLQGLTTNDVESLSVGRAQYSTITNEEGVILDDTVIYRLAEEEFL 110 Query: 67 -----------------------LEIDRSK--------------RDSLIDKLLFYKLR-- 87 L+ +L+ K LR Sbjct: 111 FIPNAGHDGEMEERWVEHRAEWDLDCAVENRTDEWAMFAIQGPDAAALVSKAAGEGLRDL 170 Query: 88 SNVIIEIQPING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 S I + G + + + V W + + Sbjct: 171 SRFSITRAEVAGTECLFARTGYTGEDGYEALVPWDGAEGV-----WEEFDCQPCGLGARD 225 Query: 146 ELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G + DF P++A + + ++G++ ++R+ Sbjct: 226 TLRIEAGFLLSGQDFHSEENPRNPYEARVGFTVDLDTE---FVGRDALARVDENGPEELF 282 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 I +P I D +G + L D + + + + Sbjct: 283 VGIRLEERGIPRQCYEIRADGEPVGEVTSGTMSPTLGEPIGLGYVPTDYAEEGTEVAVRI 342 Query: 258 TVHGVRVKASFP 269 R + P Sbjct: 343 RGTDKRARIEAP 354 >gi|16264722|ref|NP_437514.1| putative dehydrogenase protein [Sinorhizobium meliloti 1021] gi|15140860|emb|CAC49374.1| dimethylglycine dehydrogenase [Sinorhizobium meliloti 1021] Length = 825 Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 51/282 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + V G+ A L I ADV + + + +L +G + ++ D F+ Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546 Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99 + ++ D + Y + + + G Sbjct: 547 IVTGSAQAVHDADWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARDILGRITSADLSNAG 606 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145 + +E ++ R + L +E + H Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666 Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201 LRI G + + P I PH+A + +S K G +IG+E + R +H Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKHAGAPV 723 Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241 +R + T D P G IL D +G + L + Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765 >gi|302188383|ref|ZP_07265056.1| glycine cleavage system T protein [Pseudomonas syringae pv. syringae 642] Length = 374 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 92/276 (33%), Gaps = 43/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFAGVTLLGIKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + RKR Sbjct: 234 EAGLCLYGHDMDTHTSPIEASLLWAISKVRRADGERAGGFPGAERIFAQQQNGVSRKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240 ++ G+ I+ + IGT+ +LA Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329 >gi|86605832|ref|YP_474595.1| aminomethyltransferase [Synechococcus sp. JA-3-3Ab] gi|86554374|gb|ABC99332.1| putative aminomethyltransferase [Synechococcus sp. JA-3-3Ab] Length = 322 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 90/299 (30%), Gaps = 50/299 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S +++ G + +L T ++ L + +TP IL + E+ Sbjct: 17 SGWGRLRMKGSPGLDYLHNRSTQNLKALKPGQGADTVFVTPTAGIL-DLATVYVGEEDCW 75 Query: 67 LEIDRSKRDSLIDKLLFY---------------------------KLRSNVIIE------ 93 + +R L+ L L V+ Sbjct: 76 IWTSPQRRSLLMQSLGRMLPLVRGAQLQDETDQTFGFGLLGSQSQALLEKVVGSERIPTG 135 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKTYHELR 148 V + H + F++ + + + + + LR Sbjct: 136 PHEHCAVEIQGIPVHLACGTGLAQPGFTLWGTIDQKVALEECLLQAGAKLAPPELWEVLR 195 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G + + S P +A + +SL KGCY+GQEV+++ IR+ I Sbjct: 196 LEAGRPAADRELT-SDYNPLEAGL--WRAVSLDKGCYVGQEVLAKQVTYRRIRQTLWGIR 252 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + P G+ IL +IG L L R +G+ + V V Sbjct: 253 LQGEARP-GTEILRQGEKIGLLTSAGQTSQEYLGLGYVRT---KFEPAEGLQVEVGSVP 307 >gi|159902844|ref|YP_001550188.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT 9211] gi|159888020|gb|ABX08234.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT 9211] Length = 280 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 101/252 (40%), Gaps = 24/252 (9%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKI--LLYFLISKIEEDTFILE 68 ++ G+ + FLQ TA+++ P + + L+P G++ LL + + +L Sbjct: 17 RLNGRGSRKFLQGQTTAEIIH-PEGNHKYLRTCWLSPTGRLKALLEVRFIDQDAEVVVLG 75 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + K + D+++F S+ +EIQ I + + + E ++ Sbjct: 76 GNSQKLLNGFDQVIF---PSD-QVEIQSIGFIQRVQELSYKKTWGECYVEWLLPSESTSS 131 Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188 G + I+ + RI G+ + P + + N I+L KGCY+GQ Sbjct: 132 VFDGFQPANKNQIEEW---RIRQGLPIGLGEL-NEKTNPFELGL--SNLINLNKGCYLGQ 185 Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP----SGSPILTDDIEIGTLGVVVG-----KKAL 239 E ++++++ ++++++ ++ G+ + + G + + L Sbjct: 186 ETMAKLKNNSLLKQQLRFWEINKEMTSDDTLVGNYLEIGGDKAGYITSSMQIEDGKTIGL 245 Query: 240 AIARIDKVDHAI 251 A+ R + + Sbjct: 246 ALIRRKYISEKL 257 >gi|330873091|gb|EGH07240.1| glycine cleavage system T protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 374 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 98/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGHCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353 Query: 259 VHGVRVKASF 268 V + + Sbjct: 354 GKKVPMLVTK 363 >gi|149245367|ref|XP_001527181.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|158514322|sp|A5DXC3|CAF17_LODEL RecName: Full=Putative transferase CAF17, mitochondrial; Flags: Precursor gi|146449575|gb|EDK43831.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 513 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 146 ELRINHGIVDPNTDFLPST-IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + R ++G+ + + + P + +D +NG+SL KGCY+GQE+ R + IIRKR Sbjct: 292 DRRFSNGLFETGDVAADESSLLPFECNLDYINGLSLDKGCYVGQELTIRTYNNGIIRKRI 351 Query: 205 MIITG 209 + Sbjct: 352 YPVQF 356 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 73/181 (40%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIIT---------------------------ADVLTLPYK 37 +L ++S I++ G A+ FL ++T DV+ + Sbjct: 10 HLVSKSLIQIRGPDALRFLNGLLTTRLLPTITKKKQHTISSSDNSAIHATLQDVVDVSTN 69 Query: 38 IARG-------------------SAILTPQGKILLYFLISKIE----------------- 61 S IL +G+++ + + Sbjct: 70 YGLMHEDIYDPEHNILIGRDGLNSMILNSKGRVVTDLYLYAMPFSTYLPESETCTDNDSL 129 Query: 62 ----------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 + F++E+D S+ S+I L YKL S V I + +N F Sbjct: 130 WGKTLESEMSQPNFLMEVDSSRVKSVILMLKMYKLASKVKILPRDDLKSYYYYNDSAEFD 189 Query: 112 N 112 + Sbjct: 190 D 190 >gi|222151428|ref|YP_002560584.1| glycine cleavage system T protein [Macrococcus caseolyticus JCSC5402] gi|222120553|dbj|BAH17888.1| glycine cleavage system T protein [Macrococcus caseolyticus JCSC5402] Length = 372 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 49/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A+ +LQ ++T D + K A+ + I G ++ ++ K+EE+ ++ Sbjct: 64 SHMGEIIVEGEHALEYLQYVLTNDASKMTDKKAQYTMICNEDGGVVDDLVVYKLEENKYL 123 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ D + L +K + V I + G + + + + E S + Sbjct: 124 LVVNAGNTDIDFEWLKSHK-KDGVTITNVSSEYGQIAVQGPKTLEKLAPEVKENISEMKL 182 Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148 + + + LR Sbjct: 183 FEFLKDVEIFGKNVILSQSGYTGEYGFEIYCKAEDTLSIWEALLNLGITPCGLGARDTLR 242 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + + D I P++A M + L KG +IG+ V+ + + + RK I Sbjct: 243 LEAALPLHGQDLSTE-ITPYEAKMGFS--VKLDKGNFIGKSVLETQKLKGVNRKSAGIEL 299 Query: 209 GTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 + + + +D +IG + ALA+ D + + + Sbjct: 300 LERGIARTDYEVFDKEDNKIGYITSGTQSPLTGRSIALALINTDFTAIDTEVYVQVRKKR 359 Query: 262 VRVKASF 268 + K Sbjct: 360 IPAKVVK 366 >gi|228476087|ref|ZP_04060795.1| glycine cleavage system T protein [Staphylococcus hominis SK119] gi|228269910|gb|EEK11390.1| glycine cleavage system T protein [Staphylococcus hominis SK119] Length = 363 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 57/311 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G++A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++ Sbjct: 53 SHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYL 112 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123 L ++ + D + + + K + V + G + + S +D S Sbjct: 113 LIVNAANTDKDFEWIQKHQSKFNAAVT-NVSEQYGQLAIQGPQARTLVSELVDVDVSEMK 171 Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147 V + + + + L Sbjct: 172 PFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGIVPCGLGARDTL 231 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRK 202 R+ G+ D +I P++ GI + +IG+ V+ + R+ Sbjct: 232 RLEAGLPLHGQDLT-ESITPYE------GGIGFAAKPLIEDEFIGKSVLKDQKENGSKRR 284 Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 + + +G ++ D EIG + K++A+A ID+ + + K + + Sbjct: 285 TVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLV 344 Query: 258 TVHGVRVKASF 268 V ++KA Sbjct: 345 QVRKRQLKAKI 355 >gi|297529406|ref|YP_003670681.1| glycine cleavage system protein T [Geobacillus sp. C56-T3] gi|297252658|gb|ADI26104.1| glycine cleavage system T protein [Geobacillus sp. C56-T3] Length = 364 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++ Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86 L ++ + + ++ +L + L Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169 Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 ++ +E+ + +V + E F ++ ++ + +L + + + Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDGVLPCGLGA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRK 202 LR + + +I P +A + + K +IGQ V+ R + R+ Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKEPPFIGQAVLKRQKEEGPPRR 284 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 I +P G + D E+G + LA+ + D AI + + Sbjct: 285 LVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342 Query: 257 LTVHGVRVKASF 268 + + G R+KA+ Sbjct: 343 VDIRGKRLKANI 354 >gi|217979703|ref|YP_002363850.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella silvestris BL2] gi|217505079|gb|ACK52488.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella silvestris BL2] Length = 761 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 105/311 (33%), Gaps = 62/311 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS ++ G A LQ+ +T ++ L +AI G +L + ++ + Sbjct: 432 LIDLSALRKFEITGPDAEILLQSAVTRNIRKLAVGQIVYTAICHEHGGMLDDGTVFRLGD 491 Query: 63 DTFILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNS 113 + F L + +L LR+ V ++ V L + T + Sbjct: 492 NNFRLVCGEDYCGVFLRELAARQGLRAFVRSSTDQLHNVALQGPKSRDILREILVTPPHR 551 Query: 114 SFIDE-------------------RFSIADVLLHRTWGHNEKIASDIKTYHEL------- 147 + DE R L + W H S + + L Sbjct: 552 ASADELKWFRFTVGKIAGLPVLVSRTGYTGELGYEIWLH---PGSAVAVWDALMAAGKPY 608 Query: 148 -------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSR 193 RI G++ + +F T P +A + + K Y+G E ++R Sbjct: 609 GIAPFGFAALDMVRIEAGLIFAHHEFCDETD-PFEAGIGF--AVPAEKADPYVGSEALAR 665 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDH 249 + I R + + G + + G P+ ++G + V + +A+AR+D Sbjct: 666 RRASPIRRLAGLDVAGNEAVAH-GDPVFAGRAQVGVVTSAMRSPVLGRTIALARLDAACA 724 Query: 250 AIKKGMALTVH 260 +I G L + Sbjct: 725 SI--GTDLEIG 733 >gi|325859648|ref|ZP_08172781.1| aminomethyltransferase [Prevotella denticola CRIS 18C-A] gi|325482928|gb|EGC85928.1| aminomethyltransferase [Prevotella denticola CRIS 18C-A] Length = 361 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 88/267 (32%), Gaps = 48/267 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ I T DV LP + P G ++ I K++E ++ Sbjct: 51 SHMGEVIVSGPDADRYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDERLYL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTF--------------- 110 + I+ + D + + +VIIE G + E Sbjct: 111 MTINAANIDKDMAWIRQNAEGFDVIIENKSDAYGQLAVQGPEAEEKMENVLGLACKDLKF 170 Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 I R +G I IK + + Sbjct: 171 YEVKRLEKDGEEVIVSRTGYTGEDGFEVYGTPGYI---IKAWDKLMEAGVKPCGLGCRDT 227 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205 LR G+ + I P A + + + K +IG+E + R + I ++ R + Sbjct: 228 LRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGISQRLRGI 284 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232 + G + +P G +L D E+G + Sbjct: 285 ELEG-NAIPRHGYKVLKDGKEVGEVTT 310 >gi|312962741|ref|ZP_07777230.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6] gi|311283116|gb|EFQ61708.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6] Length = 374 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +A L+ ++ D++ LP + R + QG IL +++ + D Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 L ++ + +D + L + + ++ +Q V + S +F Sbjct: 115 LVVNAACKDQDLAHLRAHIGDQCTVEPLFEARALLALQGPAAVKVLARLAPEVSKMTFMQ 174 Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I + A+ L E A + LR+ Sbjct: 175 FAALRLLGVDCYVSRSGYTGEDGFEISVPAASAESLARSLLAETEVEAIGLGARDSLRLE 234 Query: 151 HGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 G+ D N + P A+ + G + G + + Q + RKR + Sbjct: 235 AGLCLYGHDMNAETTPIEASLLWAISKARRADGVRAGGFPGADRIFTQQQTGVSRKRVGL 294 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ + IG++ G LA+ +D A+ ++ V Sbjct: 295 LPQERTPVREGAEIVDAEGTVIGSVCS--GGFGPSLGGPLAMGYLDSAFTALDTEVSALV 352 Query: 260 HGVRVKASF 268 G RV Sbjct: 353 RGKRVPLRV 361 >gi|225181892|ref|ZP_03735327.1| glycine cleavage system T protein [Dethiobacter alkaliphilus AHT 1] gi|225167406|gb|EEG76222.1| glycine cleavage system T protein [Dethiobacter alkaliphilus AHT 1] Length = 368 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 106/323 (32%), Gaps = 65/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK+A FLQ ++T DV L S + P G + L+ + ++ ++ Sbjct: 52 SHMGEIMVEGKNAEEFLQRVLTNDVSKLKDNKIIYSPVCYPHGGTVDDILVYRYNKEKYL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKLLF--------Y 84 L ++ ++ ++ Y Sbjct: 112 LVVNAGNTSKDFEWFQDNLTEGVSLKNISPEIAQLALQGPNSQKILQEITKTQLDNIMYY 171 Query: 85 KLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-- 140 S E+ IN ++ + E F +++ A L + +EK D Sbjct: 172 GFVSK--SEVAGINCIISRTGYTGEDGFELYCPVED----ATYLWRALFDASEKTQGDLV 225 Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQH 196 + LR + + I P +A ++ +S K +IG+E + + + Sbjct: 226 PVGLGARDVLRFEAALPLYGHEL-SKDITPLEAGLNRF--VSFDKEVGFIGKEALLKQKE 282 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 I RK + +P G I + EIG + +A +DK Sbjct: 283 EGIKRKVMGLEMLERGIPREGYKIKKGEEEIGWVSSGSLSPTLDKYLGMAFLDVDKAKVG 342 Query: 251 IKKGMALTVHGVRVKASFPHWYK 273 + +A+ R + +Y+ Sbjct: 343 DEVLVAIRKREYRARVVKLPFYR 365 >gi|75908972|ref|YP_323268.1| glycine cleavage system aminomethyltransferase T [Anabaena variabilis ATCC 29413] gi|75702697|gb|ABA22373.1| aminomethyltransferase [Anabaena variabilis ATCC 29413] Length = 376 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 105/296 (35%), Gaps = 52/296 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ + GK+ I LQ ++ +D+ L A+ + +L PQG I+ ++ ED Sbjct: 59 SHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDDIIVYYQGEDNSG 118 Query: 64 --TFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGV----------- 100 + ++ + ++ L +++ + V+I +Q + Sbjct: 119 MQQAFIIVNAATTSKDKAWILSHLDQNQVQFQDISLAKVLIAVQGPKAIDYLQPFVQQNL 178 Query: 101 ----------VLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTY 144 Q + + + E V L R+ + I + Sbjct: 179 QPIKAFGHLGATVLGQAGFIARTGYTGEDGFEILLDPEVGVELWRSLSNAGVIPCGLGAR 238 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + D +T P +A + L + TKG +IG+ V+ + + + R+ Sbjct: 239 DTLRLEAAMALYGQDINDNTT-PLEAGLGWLVHLD-TKGDFIGRSVLEQQKATGVKRRLI 296 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252 + ++ G +L+D +G + ALA ++ KV ++ Sbjct: 297 GLQAQGRNIARHGYQVLSDGKVVGEVTSGTLSPTLGHPVALAYVPSKLAKVGQPLE 352 >gi|187734953|ref|YP_001877065.1| glycine cleavage system T protein [Akkermansia muciniphila ATCC BAA-835] gi|187425005|gb|ACD04284.1| glycine cleavage system T protein [Akkermansia muciniphila ATCC BAA-835] Length = 361 Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 43/266 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G SA +L +++T D+ L + S +L + ++ ++ ++E +TF Sbjct: 54 SHMGQFTVAGGSAAAWLNSMLTNDINKLNVGQGQYSVMLNDRAGVIDDLILYRMEPETFF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--- 123 + ++ SK D L ++ + V +E V L+ S + + Sbjct: 114 VVVNASKIDEDFAWLSAHQ-PAGVTLENHSDEYVGLAVQGPECGEVFSRVIPGVELPPRN 172 Query: 124 ----------DVLLHRTWGHNE-----------------------KIASDIKTYHELRIN 150 D+++ RT E + LR+ Sbjct: 173 GISRITAEGTDLIICRTGYTGEDGFEFFCPAKEGVKWFEAFLGAGAKPCGLGARDSLRLE 232 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 +D P P +A + + +IG +++ + + R+ I Sbjct: 233 MCYPLNGSDLSPDKT-PLEAGLGFFCALDTD---FIGSDILREQKANGLSRRLAAIEYTG 288 Query: 211 DDLPPSG--SPILTDDIEIGTLGVVV 234 PP + + IG L V Sbjct: 289 KGAPPRAHYAVHVPGGEAIGELTSGV 314 >gi|261417713|ref|YP_003251395.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp. Y412MC61] gi|319767478|ref|YP_004132979.1| glycine cleavage system protein T [Geobacillus sp. Y412MC52] gi|261374170|gb|ACX76913.1| glycine cleavage system T protein [Geobacillus sp. Y412MC61] gi|317112344|gb|ADU94836.1| glycine cleavage system T protein [Geobacillus sp. Y412MC52] Length = 364 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++ Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86 L ++ + + ++ +L + L Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169 Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 ++ +E+ + +V + E F ++ ++ + +L + + + Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDGVLPCGLGA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202 LR + + +I P +A + + K +IGQ V+ R + R+ Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKEPPFIGQAVLKRQKEEGPPRR 284 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 I +P G + D E+G + LA+ + D AI + + Sbjct: 285 IVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342 Query: 257 LTVHGVRVKASF 268 + + G R+KA+ Sbjct: 343 VDIRGKRLKANI 354 >gi|149182931|ref|ZP_01861389.1| aminomethyltransferase [Bacillus sp. SG-1] gi|148849380|gb|EDL63572.1| aminomethyltransferase [Bacillus sp. SG-1] Length = 368 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 106/310 (34%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G ++ +LQ ++T D+ + A+ +A+ G + L+ KIE++ ++ Sbjct: 52 SHMGEIEVKGSGSLEYLQKMMTNDISRIKDGGAQYTAMCYENGGTVDDLLVYKIEDNHYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------WNQEHTFSNSS 114 L ++ + + L + S V + + L+ E T S+ Sbjct: 112 LVVNAANIEKDYQWLQDHVDES-VELNNLSGDYAQLAIQGPLAEQILQKLANETTLSDIG 170 Query: 115 FI----DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPS 163 F + + L+ RT E S + ++ + G + Sbjct: 171 FFKFQNEVDLNGIKALVSRTGYTGEDGFEIYCPSESASSLWRDI-LKAGEQEGILPCGLG 229 Query: 164 --TIFPHDALMDLLN------------GISL-----TKGCYIGQEVVSRIQHRNIIRKRP 204 +A + L GI + ++G+E + + RK Sbjct: 230 ARDTLRFEANLALYGQELSADITPIEAGIGFAVKVDKEADFLGKETLKSQKKEGSPRKLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 I +P G + ++ EIG + LA+ + + A+ + + Sbjct: 290 GIEMLERGIPRHGYKVFLNNEEIGEVTTGTQSPTLKKNIGLALIKTEH--SALDTELHVE 347 Query: 259 VHGVRVKASF 268 + ++KA Sbjct: 348 IRNKKLKAKV 357 >gi|327314409|ref|YP_004329846.1| aminomethyltransferase [Prevotella denticola F0289] gi|326944631|gb|AEA20516.1| aminomethyltransferase [Prevotella denticola F0289] Length = 361 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 48/267 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ I T DV LP + P G ++ I K++E ++ Sbjct: 51 SHMGEVIVSGPDADRYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDERLYL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTF--------------- 110 + I+ + D + + +VIIE G + E Sbjct: 111 MTINAANIDKDMAWIRQNAEGFDVIIENKSDAYGQLAVQGPEAEEKMENVLGLACKELKF 170 Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 I R +G I +K + + Sbjct: 171 YEVKRLEKDGEEVIVSRTGYTGEDGFEVYGTPGYI---VKAWDKLMEAGVKPCGLGCRDT 227 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205 LR G+ + I P A + + + K +IG+E + R + I ++ R + Sbjct: 228 LRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGISQRLRGI 284 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232 + G + +P G +L D E+G + Sbjct: 285 ELEG-NAIPRHGYKVLKDGKEVGEVTT 310 >gi|15966027|ref|NP_386380.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|307305579|ref|ZP_07585326.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C] gi|15075297|emb|CAC46853.1| Probable sarcosine dehydrogenase [Sinorhizobium meliloti 1021] gi|306902282|gb|EFN32878.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C] Length = 815 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 58/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + ++ + + +L +G I ++++ + F Sbjct: 490 MTSFGKIRVEGRDAQAFLQRLCANEMN-VDPGRVVYTQMLNARGGIESDLTVTRLSQTAF 548 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSW------------------NQ 106 L + + + L + +R V+I VL N+ Sbjct: 549 FLVVPGATLQRDLAWLRKH-VRDEFVVITDVTAAESVLCVMGPRARELMQKVSPNDFSNE 607 Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147 H F+ + R + L + ++ A +T Sbjct: 608 AHPFATAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLELAGADVGLKLCGL 667 Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI D +A + + KG +IG+E V + + R Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKPGKGEFIGREAVLAKRDNGLSR 724 Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252 + ++ + L I+ D +GT+ G L + + + Sbjct: 725 RLVQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVACKGESDADVLA 784 Query: 253 KGMALTVHGVRVKAS 267 + + G RVKA Sbjct: 785 SAYEIEIAGTRVKAE 799 >gi|307317520|ref|ZP_07596959.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83] gi|306896678|gb|EFN27425.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83] Length = 815 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 58/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + ++ + + +L +G I ++++ + F Sbjct: 490 MTSFGKIRVEGRDAQAFLQRLCANEMN-VDPGRVVYTQMLNARGGIESDLTVTRLSQTAF 548 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSW------------------NQ 106 L + + + L + +R V+I VL N+ Sbjct: 549 FLVVPGATLQRDLAWLRKH-VRDEFVVITDVTAAESVLCVMGPRARELMQKVSPNDFSNE 607 Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147 H F+ + R + L + ++ A +T Sbjct: 608 AHPFATAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLELAGADVGLKLCGL 667 Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI D +A + + KG +IG+E V + + R Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKPGKGEFIGREAVLAKRDNGLSR 724 Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252 + ++ + L I+ D +GT+ G L + + + Sbjct: 725 RLVQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVACKGESDADVLA 784 Query: 253 KGMALTVHGVRVKAS 267 + + G RVKA Sbjct: 785 SAYEIEIAGTRVKAE 799 >gi|66044346|ref|YP_234187.1| glycine cleavage system T protein [Pseudomonas syringae pv. syringae B728a] gi|63255053|gb|AAY36149.1| Glycine cleavage system T protein [Pseudomonas syringae pv. syringae B728a] Length = 374 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 49/284 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLCRH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFNSVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIA 242 ++ G+ I+ + IGT+ G A+ Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLTGPLAMGYL 337 >gi|91202778|emb|CAJ72417.1| similar to T-protein of glycine cleavage system [Candidatus Kuenenia stuttgartiensis] Length = 365 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 53/286 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A F+Q +IT D L K A S + +G I+ ++ K+ + F+ Sbjct: 49 SHMGKFEISGDDAFSFVQQVITNDAAPLSEKQALYSPLCNEKGGIVDDIMVYKMNRNAFL 108 Query: 67 --------------------------------------------LEIDRSKRDSLIDKLL 82 L++ ++ ++ L Sbjct: 109 FIVNCANTEKDLAWLTEQAKPYWSLKLKNVTDEMSIIALQGPSALQMLKNTLETDFKYLK 168 Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 + ++ P+ + E + D+ L + + + Sbjct: 169 RF-CFDEFFLDDLPMIISRTGYTGEDGVEILVDATYALRLWDIFLKKNEAKGLRPVG-LG 226 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ + D T+ P + L+D + K +IG+E + + + K Sbjct: 227 ARDTLRLEACFMLYGNDM-DETVTPLETLIDWT--VKFGKDSFIGKESLQEQKAGGVKHK 283 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARI 244 +P P+L +IG + KK + +ARI Sbjct: 284 IIGFEMLDQGIPRHDYPVLKKGEKIGKVTSGTFNPTTKKGIGLARI 329 >gi|254481335|ref|ZP_05094580.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214038498|gb|EEB79160.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 393 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 87/276 (31%), Gaps = 66/276 (23%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A +L +IT DV + K + +G++L I + + + + Sbjct: 65 RVTGPDAEAYLNRLITRDVSKIREKRVGYTVWCDDEGQVLDDGTIFHLGPNDYRI----C 120 Query: 73 KRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEH-------------------- 108 ID L L S +V +E + N L+ Sbjct: 121 AYARAIDWL----LWSAEGFDVCVEEETQNVAALAVQGPTSCAALMAMGLSGLDALKPFG 176 Query: 109 ----TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK------------------TYHE 146 F + R L + W EK A D+ Sbjct: 177 IEYFDFEGEQLMVSRTGFTGDLGYELWIAPEK-AEDLWDRLFAAGAPHIIKPFGMEALEM 235 Query: 147 LRINHGIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI G + DF+P+ P + +D L + L K + G++ + + R Sbjct: 236 ARIETGFIQAGVDFIPAEETIRQGRSRSPFELGLDWL--VDLNKPVFNGRKALLDEKSRG 293 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R R I+ + P + S IL + ++G + Sbjct: 294 S-RYRFAILDVAGNKPANNSFILKNGKQVGVVTSAA 328 >gi|288926409|ref|ZP_06420330.1| LOW QUALITY PROTEIN: glycine cleavage system T protein [Prevotella buccae D17] gi|288336782|gb|EFC75147.1| LOW QUALITY PROTEIN: glycine cleavage system T protein [Prevotella buccae D17] Length = 346 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 40/261 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A ++ I T DV P +L P G + L+ K+ D F Sbjct: 50 SHMGEVTVRGKDAERYVNQIFTNDVTDAPTGKIYYGMMLYPDGGTVDDLLVYKMGADDFF 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHT-------------- 109 + I+ + D + + + ++ I++Q G + E Sbjct: 110 IVINAANIDKDVAWMREHA--ADFDIDLQDRSDFYGQLAVQGPEAEHVMEEVLGLPCSEL 167 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151 + I R +G +E I + + LR Sbjct: 168 AFYTVKTIGDAIVSRTGYTGEDGFEIYGSHEFIQTLWDKLMAAGIQPCGLGCRDTLRFEV 227 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + + I P A + + L K +IG+E + + ++RK I Sbjct: 228 GLPLYGDEL-SAEISPVMAGLGMFC--KLDKPEFIGKEALLHQRAEGVVRKLVGIELADR 284 Query: 212 DLPPSGSPILTDDIEIGTLGV 232 +P G ++ + +IG + Sbjct: 285 AVPRHGYAVMKNGRQIGEVTT 305 >gi|289649163|ref|ZP_06480506.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 374 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ L + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +TD P A+ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + IGT+ G LA+ ++ A+ + Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|148243400|ref|YP_001228557.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. RCC307] gi|147851710|emb|CAK29204.1| Predicted aminomethyltransferase related to glycine cleavage T-protein (GcvT) [Synechococcus sp. RCC307] Length = 279 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 101/261 (38%), Gaps = 15/261 (5%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ ++ L T + + +TP +++ ++ + + +L Sbjct: 22 IPLRGEGSLRVLHGQTTQAIEGAAPGSLIETCCVTPTARLVALAAVAVLSDGADLLVTAG 81 Query: 72 SKRD--SLIDKLLFYKLRSNVII-EIQPI--NGVVLSWNQEHTFSNSSFIDERFSIADVL 126 S +D++LF R V + E Q + +G+V + S Sbjct: 82 SPAQVHQSLDRVLFPADR--VALGEPQALLWHGLVQPGGEPGGAGWSLPGQHWLLAEGEA 139 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 L ++ ++ +LRI+ GI P + P + + +SL KGCY+ Sbjct: 140 LPEPLMAAAALS--LEQQEQLRIHQGIPAPGAEL-REEFNPFELGLRQR--VSLEKGCYL 194 Query: 187 GQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGT-LGVVVGKKALAIAR 243 GQE ++++ R+ +++ R ++ D P G + T E G + V G + L + Sbjct: 195 GQETLAKLHSRDGLKQQLRRFVVADGADAPEPGQQLRTTSGERGALVTSVRGGRGLLLLH 254 Query: 244 IDKVDHAIKKGMALTVHGVRV 264 D + G+ L++ Sbjct: 255 RRCWDQSELAGLKLSLPEAAA 275 >gi|289623812|ref|ZP_06456766.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485822|ref|ZP_07003900.1| Aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159646|gb|EFI00689.1| Aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867849|gb|EGH02558.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 374 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ L + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +TD P A+ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + IGT+ G LA+ ++ A+ + Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|288929409|ref|ZP_06423254.1| glycine cleavage system T protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329511|gb|EFC68097.1| glycine cleavage system T protein [Prevotella sp. oral taxon 317 str. F0108] Length = 363 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 47/267 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A ++ I T D+ P +L P G + L+ K+ E+ F Sbjct: 51 SHMGEVYITGNEAEKYVNHIFTNDIAGAPVGKVFYGMMLYPDGGTVDDLLVYKLGENEFF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH----------------- 108 L I+ + D +D + +V I+ G + E Sbjct: 111 LVINAANIDKDVDWIRQNATGYDVAIDHCSDYYGQLAVQGPEAEQVMEEVLGLACKDLEF 170 Query: 109 ------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 ++ I R +G +E I ++ + + Sbjct: 171 YTAKTIATHGANVIVSRTGYTGEDGFEIYGPHEFI---VEQWDKLMASKRCVPCGLGCRD 227 Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR G+ + + I P A + L K +IG+E V++ + + +K Sbjct: 228 TLRFEVGLPLYGDEL-SNEISPVMAGFSMFC--KLDKEEFIGKEAVAKQKADGVEKKVVG 284 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232 I +P G ++ D +++G + Sbjct: 285 IELKDKAIPRHGYDVVKDGVKVGEVTT 311 >gi|315607198|ref|ZP_07882202.1| glycine cleavage system T protein [Prevotella buccae ATCC 33574] gi|315251252|gb|EFU31237.1| glycine cleavage system T protein [Prevotella buccae ATCC 33574] Length = 359 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 86/261 (32%), Gaps = 40/261 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A ++ I T DV P +L P G + L+ K+ D F Sbjct: 51 SHMGEVTVRGKDAERYVNHIFTNDVTDAPTGKIYYGMMLYPDGGTVDDLLVYKMGADDFF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHT-------------- 109 + I+ + D + + + ++ I++Q G + E Sbjct: 111 IVINAANIDKDVAWMREHA--ADFDIDLQDRSDFYGQLAVQGPEAEHVMEEVLGLPCSEL 168 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151 + I R +G +E I + + LR Sbjct: 169 AFYTVKTIGDAIVSRTGYTGEDGFEIYGSHEFIQTLWDKLMAAGIQPCGLGCRDTLRFEV 228 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + I P A + + L K +IG+E + + ++RK I Sbjct: 229 GLPLYGDELSTE-ISPVMAGLGMFC--KLDKPEFIGKEALLHQRAEGVVRKLVGIELADR 285 Query: 212 DLPPSGSPILTDDIEIGTLGV 232 +P G ++ + +IG + Sbjct: 286 AVPRHGYAVMKNGRQIGEVTT 306 >gi|255655674|ref|ZP_05401083.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-23m63] gi|296451676|ref|ZP_06893409.1| glycine dehydrogenase [Clostridium difficile NAP08] gi|296878920|ref|ZP_06902920.1| glycine dehydrogenase [Clostridium difficile NAP07] gi|296259507|gb|EFH06369.1| glycine dehydrogenase [Clostridium difficile NAP08] gi|296430192|gb|EFH16039.1| glycine dehydrogenase [Clostridium difficile NAP07] Length = 824 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 95/314 (30%), Gaps = 50/314 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++ Sbjct: 52 SHMGEVQIKGVESEKFIQNLVTNDISTLNINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID-------- 117 L I+ D + ++ R NV I+ I + + D Sbjct: 112 LVINAGNIDKDVAWIIKQSERYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKF 171 Query: 118 ----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTYH 145 R + G + + + Sbjct: 172 YKSIPSVKVCGCPCLVSRTGYTGEDGFEIYCENKYAEIIWNEVLKVGGEDICPAGLGCRD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR + + I P + + + + K +IG+ ++S+ + RK Sbjct: 232 TLRFEAALPLYGHEI-NEHISPVEGGLSIF--VKTNKESFIGKSILSKEKENGAKRKLVG 288 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTV 259 +P +G I D +G + + I + + G+A+ Sbjct: 289 FEMQGKGMPRNGYDIRIGDKIVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRK 348 Query: 260 HGVRVKASFPHWYK 273 V + +YK Sbjct: 349 KVVPAVIAKKPFYK 362 >gi|331015229|gb|EGH95285.1| glycine cleavage system T protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 374 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + + Sbjct: 55 SHMGQIRLSGADAAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L IE+ +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGRCEIELLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353 Query: 259 VHGVRVKASF 268 V + + Sbjct: 354 GKKVPMLVTK 363 >gi|256371902|ref|YP_003109726.1| glycine cleavage system T protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008486|gb|ACU54053.1| glycine cleavage system T protein [Acidimicrobium ferrooxidans DSM 10331] Length = 349 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 95/285 (33%), Gaps = 39/285 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A LQA +T D+ + + A+ + +L G +L ++ ++ + F Sbjct: 51 SHLGTVVVEGPDAFDRLQATLTNDLRKIGPQRAQYTHLLDVDGSVLDDIIVWWVDRERFH 110 Query: 67 LEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWN---QEHTFSNSSFIDERFSI 122 + + + +++ L RS I+ +Q L + + + R Sbjct: 111 VMPNAANTENVTAALGGRDITRSRCILALQGPGAAALLGPLLEGAEPPARNRIVTGRIGD 170 Query: 123 ADVLLHRT-----------------------WGHNEKIASDIKTYHELRINHGIVDPNTD 159 +V + T +A + LR+ G+ + Sbjct: 171 IEVRVAGTGYTGGPGVELEVAPDDAVALMERLLERGAVACGLGARDSLRLEAGLPLHGNE 230 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 P + P +A + + ++ KG + G+E + Q + + + PP Sbjct: 231 LGPG-LTPLNAGLGWV--VAFEKGPFPGREALLAQQAAGVNP-ILIGVRSLTRQPPRAHD 286 Query: 220 ILTD--DIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMA 256 +L D +G++ G LA + + A Sbjct: 287 VLVDAASTAVGSISSGGYSPLAGVGIGLAYVDPEAAAGPFRAVRA 331 >gi|330969231|gb|EGH69297.1| glycine cleavage system T protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 374 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LAVNAACKDQDLAHLCRH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFNNVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240 ++ G+ I+ + IGT+ +LA Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLA 329 >gi|296188241|ref|ZP_06856633.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] gi|296047367|gb|EFG86809.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] Length = 359 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 105/312 (33%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+Q ++T D+ +L A + + P G ++ L+ K+ E+ ++ Sbjct: 52 SHVGKIQIKGKDAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYL 111 Query: 67 LEIDRS-----------------------------------KRDSLIDKLL-------FY 84 + I+ K ++++ KL Y Sbjct: 112 ITINSGNVKRIFKWLINKKNKHDVSIINISNEICELALQGPKSETILQKLTDIDLKEIKY 171 Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 R +V I + E F + + + + + + + Sbjct: 172 LSFRKDVSICDTKCLLSRTGYTGEDGFEIY-ILPKDLELLWNSILKAGREEGIKPAGLCV 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR++ + + L I P +A + ++L K +IG+ + + + I RK Sbjct: 231 RDALRLDSNLPPFGDELL-EDITPFEAGL--KTYVNLRKNDFIGKNALKKESEKGIKRKI 287 Query: 204 PMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 TG SGS ++ + ++G + LA+ + + Sbjct: 288 VKFETGDKCTNEISGSNVIFNGEKVGIVATEQFSPKKKKNMGLALVDLKYSKLGTTIFIK 347 Query: 257 LTVHGVRVKASF 268 V+ K + Sbjct: 348 DMNDLVKAKVTR 359 >gi|255523308|ref|ZP_05390278.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] gi|255512962|gb|EET89232.1| glycine cleavage system T protein [Clostridium carboxidivorans P7] Length = 381 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 105/312 (33%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+Q ++T D+ +L A + + P G ++ L+ K+ E+ ++ Sbjct: 74 SHVGKIQIKGKDAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYL 133 Query: 67 LEIDRS-----------------------------------KRDSLIDKLL-------FY 84 + I+ K ++++ KL Y Sbjct: 134 ITINSGNVKRIFKWLINKKNKHDVSIINISNEICELALQGPKSETILQKLTDIDLKEIKY 193 Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 R +V I + E F + + + + + + + Sbjct: 194 LSFRKDVSICDTKCLLSRTGYTGEDGFEIY-ILPKDLELLWNSILKAGREEGIKPAGLCV 252 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR++ + + L I P +A + ++L K +IG+ + + + I RK Sbjct: 253 RDALRLDSNLPPFGDELL-EDITPFEAGL--KTYVNLRKNDFIGKNALKKESEKGIKRKI 309 Query: 204 PMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 TG SGS ++ + ++G + LA+ + + Sbjct: 310 VKFETGDKCTNEISGSNVIFNGEKVGIVATEQFSPKKKKNMGLALVDLKYSKLGTTIFIK 369 Query: 257 LTVHGVRVKASF 268 V+ K + Sbjct: 370 DMNDLVKAKVTR 381 >gi|254852603|ref|ZP_05241951.1| glycine cleavage system T protein [Listeria monocytogenes FSL R2-503] gi|254932337|ref|ZP_05265696.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262] gi|300765412|ref|ZP_07075394.1| glycine cleavage system T protein [Listeria monocytogenes FSL N1-017] gi|258605917|gb|EEW18525.1| glycine cleavage system T protein [Listeria monocytogenes FSL R2-503] gi|293583893|gb|EFF95925.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262] gi|300513849|gb|EFK40914.1| glycine cleavage system T protein [Listeria monocytogenes FSL N1-017] gi|328475065|gb|EGF45853.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 220] gi|332311789|gb|EGJ24884.1| Aminomethyltransferase [Listeria monocytogenes str. Scott A] Length = 362 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ EIG + LA+ ID I + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|26987722|ref|NP_743147.1| glycine cleavage system T protein [Pseudomonas putida KT2440] gi|24982410|gb|AAN66611.1|AE016288_10 glycine cleavage system T protein [Pseudomonas putida KT2440] Length = 373 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L++++ D++ LP + R + QG IL +++ + EDT Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + ++ + L + ++ +Q V + + +F+ Sbjct: 114 LVVNAACKEQDLAHLQTHIGSRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R + AD L R E + LR+ Sbjct: 174 FRRVKLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLMAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206 G+ D T +L+ ++ + G + G E + + RKR + Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRADGARAAGFPGAEAIFAHVRDGVARKRVGL 293 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ +D +G + G +A+ ID A+ + V Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLAAPVAMGYIDSEHAALDTALFAVV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKKVALKV 360 >gi|226223949|ref|YP_002758056.1| aminomethyltransferase [Listeria monocytogenes Clip81459] gi|259647494|sp|C1L2Q4|GCST_LISMC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|225876411|emb|CAS05120.1| Putative aminomethyltransferase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 362 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEVGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ EIG + LA+ ID I + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|303234821|ref|ZP_07321446.1| aminomethyltransferase [Finegoldia magna BVS033A4] gi|302493939|gb|EFL53720.1| aminomethyltransferase [Finegoldia magna BVS033A4] Length = 364 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 53/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+ Sbjct: 51 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 + + + + + Y +E++ I+ V + + Sbjct: 111 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 168 Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146 D ++ DVL+ RT E + +K + E Sbjct: 169 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYANAEAIVKLWDELLEKGKDLGVKPCGLG 228 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR + + + P + + + + K ++G+ I +K Sbjct: 229 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 285 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 I + + G+ + D IG + LA A +DK A+ + + Sbjct: 286 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 345 Query: 259 VHGVRVKASF 268 + KA+ Sbjct: 346 IRNKPAKATV 355 >gi|169824159|ref|YP_001691770.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328] gi|167830964|dbj|BAG07880.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328] Length = 366 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 53/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+ Sbjct: 53 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 + + + + + Y +E++ I+ V + + Sbjct: 113 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 170 Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146 D ++ DVL+ RT E + +K + E Sbjct: 171 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYANAEAIVKLWDELLEKGKDLGVKPCGLG 230 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR + + + P + + + + K ++G+ I +K Sbjct: 231 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 287 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 I + + G+ + D IG + LA A +DK A+ + + Sbjct: 288 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 347 Query: 259 VHGVRVKASF 268 + KA+ Sbjct: 348 IRNKPAKATV 357 >gi|290893543|ref|ZP_06556526.1| glycine cleavage system T protein [Listeria monocytogenes FSL J2-071] gi|290556888|gb|EFD90419.1| glycine cleavage system T protein [Listeria monocytogenes FSL J2-071] Length = 362 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100 L ++ + + ++ Y K+ + + +++ I+ Sbjct: 112 LVVNAANTAKDFEWMVKNIQGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSIS-- 169 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147 + ++ + I R + + + L Sbjct: 170 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 230 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 286 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260 +P P+ +D EIG + LA+ ID + + + + + Sbjct: 287 ELIERGIPRHDYPVFLNDKEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 344 Query: 261 GVRVKASF 268 ++KA Sbjct: 345 NKKIKAKI 352 >gi|299823010|ref|ZP_07054896.1| aminomethyltransferase [Listeria grayi DSM 20601] gi|299816539|gb|EFI83777.1| aminomethyltransferase [Listeria grayi DSM 20601] Length = 364 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 108/315 (34%), Gaps = 53/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G+ ++ FLQ ++T ++ L A+ + + P G + ++ ++ ED F+ Sbjct: 52 SHMGEIEISGEKSVAFLQHLLTNNIEKLAIGRAQYTIMCYPDGGTVDDLVVYRLAEDKFL 111 Query: 67 LEIDRS--------------KRDSLIDK--------LLFYK----LRSNVIIEIQPINGV 100 ++ + L ++ L K L+ V I+I I Sbjct: 112 AVVNAANISKDWEWMIGNNGIGAELKNRSGEISQLALQGPKAAELLQKEVSIDIAKIP-- 169 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HEL 147 + + + + + +NE S + L Sbjct: 170 FFGFQENVELFGCQVLLSKSGYTGEDGFEIYLNNEDAISVWEALVAKGAKPIGLGARDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ + + + I P +A + + L K +IG+E + + ++ + RK I Sbjct: 230 RLEAVLALYGQELSQN-ISPLEAGLSF--AVKLQKEADFIGKEALIKQKNDGLKRKSVGI 286 Query: 207 ITGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + G P+ + EIG + ALA+ D + + + Sbjct: 287 EMIDRGIARHGYPVYDAAGEKEIGEITSGGPSPSLDKNIALALIESDYAQEGEELVIGIR 346 Query: 259 VHGVRVKASFPHWYK 273 ++ K +YK Sbjct: 347 AKKLKAKIIPTPFYK 361 >gi|227822723|ref|YP_002826695.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium fredii NGR234] gi|227341724|gb|ACP25942.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium fredii NGR234] Length = 815 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 58/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A+ FLQ + ++ + + +L +G I ++++ E F Sbjct: 490 MTSFGKIRVEGRDALAFLQRLCANELN-VEPGRIVYTQMLNARGGIESDLTVTRLSETAF 548 Query: 66 ILEIDRSKRDSLIDKLLFY-----------------------KLRS---NVIIEIQPING 99 +L + + + L + K R V Sbjct: 549 LLIVPGATLQRDLAWLRKHLGDEFVVITDATAAESVLCVMGPKARELMQKVSPNDFSNEA 608 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 +E R + L + ++ A +T E Sbjct: 609 HPFGAAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHIFETLEEAGRDVGLKLCGLH 668 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI D +A + + + KG +IG+E V + + + Sbjct: 669 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKVDKGDFIGREAVL-TKQDEDLSR 724 Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIK 252 R + TD P I+ + +GT+ G L + + Sbjct: 725 RLVQFRLTDPEPLLFHNEAIVRNGEIVGTITSGNYGHHLGGAIGLGYVPCSGESAADVLA 784 Query: 253 KGMALTVHGVRVKAS 267 + + G RVKA Sbjct: 785 SSYEIEIAGTRVKAE 799 >gi|223938760|ref|ZP_03630649.1| glycine cleavage system T protein [bacterium Ellin514] gi|223892611|gb|EEF59083.1| glycine cleavage system T protein [bacterium Ellin514] Length = 380 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 99/328 (30%), Gaps = 68/328 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A FL +T D+ L + + + QG ++ ++ + ++ Sbjct: 50 SHMGEVLVSGSGAEEFLNHTLTNDIRKLAVGGGQYTLMCNEQGGVIDDLYAYRLAGEEYL 109 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFID--- 117 L I+ S+ D L +L + +++V ++ V L + F N F Sbjct: 110 LIINASRIDVDVPWLESQLAAFAKKNSVTLKNTSEQTGAVALQGPRVSEFINQCFPGTAS 169 Query: 118 ----------------ERFSIADVLLH--RTWGHNEK----------------------- 136 RFS + + RT E Sbjct: 170 GGTAVASPSELKKNQIARFSFSGKPVWVSRTGYTGEDGFEIVAPAEIIGEVWSRIMTIGH 229 Query: 137 ----IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 + + LR + T P +A + +S KG ++G+ V++ Sbjct: 230 QYCLQPAGLGARDTLRTEVCYPLYGHELDEQTT-PIEAGLGFF--VSFDKGDFVGRAVLA 286 Query: 193 RIQHRNIIRKRPMIITGTDDLPP---------SGSPILTDDIEIGTLGVVVGK-KALAIA 242 + + +K PP +P+ ++ GT +G + Sbjct: 287 GQKASGVTKKCIAFKMTDKSAPPRPHYPIWSTGPNPVQIGEVVSGTQSPSLGNGIGMGYV 346 Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFP 269 + + + + + S P Sbjct: 347 KTEFAKAQTPIEIEIRGKRAAALIVSKP 374 >gi|67924499|ref|ZP_00517920.1| Glycine cleavage system T protein [Crocosphaera watsonii WH 8501] gi|67853646|gb|EAM48984.1| Glycine cleavage system T protein [Crocosphaera watsonii WH 8501] Length = 364 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 47/311 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G+ + LQ+++ +D+ L A+ + +L P G I+ ++ D + Sbjct: 53 SHMAKFSLEGEGWLSLLQSLVPSDLSRLNPGQAQYTVLLNPDGGIIDDIIVYCQGPDKAV 112 Query: 67 LEIDRSKRDS----LIDKLLFYKL-RS-----NVIIEIQPINGV---------------V 101 + + + +D ++ L +K+ S V++ +Q V Sbjct: 113 IIANAATKDKDKQWILSHLGTHKVNFSDLSPEKVLLAVQGPQTVEKLQPFVEADLTQLSF 172 Query: 102 LSWNQEHTFSNSSFI-------DERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRI 149 + +FI ++ F + L R+ + LR+ Sbjct: 173 FGHIETQVLGYPAFIARTGYTGEDGFEVMIASEGGQELWRSLIEANVSPCGLGARDTLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + D P +A + L + K +IG+EV+ + Q +++R + + Sbjct: 233 EAAMCLYGQDI-DDRTTPLEAGLKWLVHLD-KKEQFIGREVLEK-QATEGVKRRLVGLQM 289 Query: 210 TDDLPPSGS-PILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGV 262 P+ + +G + +LA + + + Sbjct: 290 EGRHIARHDYPVASGGKIVGEVTSGTIGPTLGKAISLAYLPTELSKKGTTVEVEIRGKLY 349 Query: 263 RVKASFPHWYK 273 K +Y+ Sbjct: 350 PAKVVKKPFYR 360 >gi|330963181|gb|EGH63441.1| glycine cleavage system T protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 374 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 101/311 (32%), Gaps = 51/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELM 114 Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + +D + L ++ R+ ++ +Q V + ++ +F Sbjct: 115 LVVNAACKDQDLAHLREHLAGHCEIEPLFEQRA--LLALQGPAAVTVLARMAPEVAHMTF 172 Query: 116 ---------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I A+ L R E + LR Sbjct: 173 MQFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRP 204 + G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 233 LEAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRV 292 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMAL 257 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 293 GLLPQERTPVREGTQIVNDQDVAIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWARV 352 Query: 258 TVHGVRVKASF 268 V + + Sbjct: 353 RGKKVPMLVTK 363 >gi|330975731|gb|EGH75797.1| glycine cleavage system T protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 374 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVTLLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240 ++ G+ I+ + IGT+ +LA Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329 >gi|301384646|ref|ZP_07233064.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato Max13] gi|302058901|ref|ZP_07250442.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato K40] gi|302133014|ref|ZP_07259004.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 374 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + + Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353 Query: 259 VHGVRVKASF 268 V + + Sbjct: 354 GKKVPMLVTK 363 >gi|254824593|ref|ZP_05229594.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL J1-194] gi|255520218|ref|ZP_05387455.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL J1-175] gi|293593831|gb|EFG01592.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL J1-194] Length = 362 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ EIG + LA+ ID I + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345 Query: 262 VRVKASF 268 ++KA Sbjct: 346 KKIKAKI 352 >gi|260909727|ref|ZP_05916421.1| glycine cleavage system T protein [Prevotella sp. oral taxon 472 str. F0295] gi|260636152|gb|EEX54148.1| glycine cleavage system T protein [Prevotella sp. oral taxon 472 str. F0295] Length = 363 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 55/271 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A ++ I T DV P +L P G + L+ K+ E+ F Sbjct: 51 SHMGEVYITGNEAEKYVNHIFTNDVAGAPIGKVFYGMMLYPDGGTVDDLLVYKLGENEFF 110 Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110 L I+ + D +D + Y +V I+ L+ Sbjct: 111 LVINAANIDKDVDWMRQNAEGY----DVAIDHCSDYYAQLAVQGPEAEQVMEEVLGLTCK 166 Query: 111 ------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 + ++ + R +G +E I ++ + + Sbjct: 167 ELEFYTAKTIANNGANIVVSRTGYTGEDGFEIYGPHEFI---VEQWDKLMASKRSVPCGL 223 Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR G+ + + I P A + L K +IG+E V++ + + + Sbjct: 224 GCRDTLRFEVGLPLYGDEL-SNEISPVMAGFSMFC--KLDKEEFIGKEAVAKQKADGVEK 280 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 K I +P G ++ D +++G + Sbjct: 281 KVVGIELKDKAIPRHGYDVMKDGVKVGEVTT 311 >gi|295681427|ref|YP_003610001.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002] gi|295441322|gb|ADG20490.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002] Length = 832 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 63/321 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ + + V G+ A LQ I+ DV +P + +L +G ++++ +D + Sbjct: 496 MSSFAKLLVKGRDAEAVLQGIVANDVA-VPPGTTVYTGVLNKRGNYESDLTLTRLADDQY 554 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS----------------WNQE 107 ++ ++ +D L V++++ V+ W E Sbjct: 555 LVVTGSAQATRDLDYLEKAIAPERHCVVVDVTSQYAVLAVMGPHARALLQSVSKADWRNE 614 Query: 108 HTFSN---------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 ++ R S L + E +T H Sbjct: 615 AFPFGQSREIDIGYATVRATRLSYVGELGWELYVPVEFAVGVYETLHAAGKLFGLVNAGY 674 Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNII 200 LRI G + P P +A + L K + G++ + R++ + Sbjct: 675 YAIESLRIEKGYRAWGRELSPD-CNPFEAGLAF--ACKLDKDIDFRGRDALLRLR-DAPL 730 Query: 201 RKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 R+R +I+T + G IL D +G + L A+ +++ D A Sbjct: 731 RRRLVILTVDGAEHLMLWGGEAILRDGEPVGAVTSAAFGHTLRCPVAMGFVNRADGAADA 790 Query: 254 ------GMALTVHGVRVKASF 268 + V G +V+AS Sbjct: 791 AWLAQGRYTIDVAGEQVRASV 811 >gi|77460615|ref|YP_350122.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf0-1] gi|77384618|gb|ABA76131.1| putative aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas fluorescens Pf0-1] Length = 374 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 100/308 (32%), Gaps = 51/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +A L+ ++ D++ LP + R + G IL +++ + D Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELF 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLQKH-IGDQCKIEQLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L E A + LR+ Sbjct: 174 QFTRVKLLGVDCFVSRSGYTGEDGFEISVPAVDAEKLARALLAEPEVAAIGLGARDSLRL 233 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D NT+ P A+ G + G E V Q + RKR Sbjct: 234 EAGLCLYGHDMNTETTPIEASLLWAISKPRRADGARAGGFPGAEQVFAQQQNGVSRKRVG 293 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV-GKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + EI +G V G LA+ +D A+ + Sbjct: 294 LLPQERTPVREGAEIVNEAGEI--IGSVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAI 351 Query: 259 VHGVRVKA 266 V G +V Sbjct: 352 VRGKKVPL 359 >gi|46907574|ref|YP_013963.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes serotype 4b str. F2365] gi|47093626|ref|ZP_00231383.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b H7858] gi|254992321|ref|ZP_05274511.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL J2-064] gi|59797786|sp|Q71ZX4|GCST_LISMF RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|46880842|gb|AAT04140.1| glycine cleavage system T protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018002|gb|EAL08778.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b H7858] Length = 362 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPSAEKILAKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ EIG + LA+ ID I + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345 Query: 262 VRVKASF 268 ++KA Sbjct: 346 KKIKAKI 352 >gi|330811373|ref|YP_004355835.1| aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379481|gb|AEA70831.1| Aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 374 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 102/307 (33%), Gaps = 49/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D Sbjct: 55 SHMGQIRLTGAGAAKALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 L ++ + +D + L + + ++ +Q V + + +F Sbjct: 115 LVVNAACKDQDLAHLRAHIGAQCSIEPLFEARALLALQGPAAVTVLARLAPDVAKMTFMQ 174 Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I + A+ L E A + LR+ Sbjct: 175 FQRVTLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSLRLE 234 Query: 151 HGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 G+ D NT+ P A+ + G + G E V Q + RKR + Sbjct: 235 AGLCLYGHDMNTETTPIEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVKRKRVGL 294 Query: 207 ITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ + E IGT+ G LA+ +D A+ + V Sbjct: 295 LPQERTPVREGAEIVNEAGEIIGTVCS--GGFGPTLGGPLAMGYLDSAYVALDTPVWAIV 352 Query: 260 HGVRVKA 266 G +V Sbjct: 353 RGKKVPL 359 >gi|17232101|ref|NP_488649.1| glycine cleavage system aminomethyltransferase T [Nostoc sp. PCC 7120] gi|24636860|sp|Q8YNF7|GCST_ANASP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|17133746|dbj|BAB76308.1| glycine cleavage system protein T [Nostoc sp. PCC 7120] Length = 376 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 96/277 (34%), Gaps = 44/277 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ + GK+ I LQ ++ +D+ L A+ + +L PQG I+ ++ ED Sbjct: 59 SHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDDIIVYYQGEDNTG 118 Query: 64 --TFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGV----------- 100 + ++ + ++ L +++ + V+I IQ + Sbjct: 119 TQQAFIIVNAATTSKDKAWILSHLDQNQVQFQDISPAKVLIAIQGPKAIGYLQPFVQQNL 178 Query: 101 ----VLSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144 + + FI V L R+ I + Sbjct: 179 QPIKAFGHLEATVLGQAGFIARTGYTGEDGFEILVDPEVGVELWRSLYDAGVIPCGLGAR 238 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + D +T P +A + L + TKG +IG+ V+ + + + R+ Sbjct: 239 DTLRLEAAMALYGQDIDDNTT-PLEAGLGWLVHLD-TKGDFIGRSVLEQQKATGVQRRLI 296 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + T ++ G +L+D +G + L Sbjct: 297 GLQTQGRNIARHGYQVLSDGKVVGGVTSGTLSPTLGY 333 >gi|46445915|ref|YP_007280.1| glycine cleavage system T protein [Candidatus Protochlamydia amoebophila UWE25] gi|46399556|emb|CAF23005.1| probable glycine cleavage system T protein [Candidatus Protochlamydia amoebophila UWE25] Length = 344 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 47/283 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A FL + T ++ A + QG + +I + F Sbjct: 33 SHMGKIDVRGPDAERFLDYLSTNRIMGKGSNTATYTVWCNSQGGSIDDVIIYRHSSTYFF 92 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111 + ++ S R + + V I+ Q N +L+ +F Sbjct: 93 VIVNASNRQKDLAHMQKQAAEFQVTIQPQFENSGILALQGPFSFPLVDMLFPGNLSLKPM 152 Query: 112 --------NSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHE 146 + I R +G NE+I S + Sbjct: 153 SFTSIQELDQPLILSRTGYTGAGGFEFYGTNEQIISLWDRLLNTGKTFGIEPIGLGARDT 212 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G + TI P +++ + K ++G++ + ++ I R + Sbjct: 213 LRLEMGFALYGHEI-SDTIAPTESVSAW--AVKFDKTDFLGKQALKSLEATPIKRMAYGV 269 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + G PI D I IG + +A+A+ +D Sbjct: 270 KLKEPGIARQGYPIFKDGIRIGEVTSGSISPSLNEAVALILVD 312 >gi|296159844|ref|ZP_06842665.1| FAD dependent oxidoreductase [Burkholderia sp. Ch1-1] gi|295889827|gb|EFG69624.1| FAD dependent oxidoreductase [Burkholderia sp. Ch1-1] Length = 831 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 63/280 (22%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69 V G+ A LQ I+ DV +P + +L +G F ++++ +D ++L Sbjct: 509 VKGRDAQSVLQGIVANDVD-VPTGATVYTGMLNERGGYESDFTLTRLADDQYLLVTGSAQ 567 Query: 70 ---DRSKRDSLI---DKLLF------YKL------RSN-----VIIEIQPINGVVLSWNQ 106 D + I Y + RS V ++ Sbjct: 568 TTRDFDTIERAIPHDKHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149 E ++ R + L + E +T H LRI Sbjct: 628 EVDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-----IQHRNI-IRKR 203 G + P T P +A G+S C +G+++ R ++ R +R+R Sbjct: 688 EKGYRAWGRELTPDT-NPFEA------GLSF--ACKLGKDIAFRGRDALLKLRAEPLRRR 738 Query: 204 PMIITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240 +++T G IL D +G + L Sbjct: 739 MVVLTADGAAQRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778 >gi|315303009|ref|ZP_07873723.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596] gi|313628616|gb|EFR97035.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596] Length = 362 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 105/312 (33%), Gaps = 49/312 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ ++ E ++ Sbjct: 52 SHMGEIIVEGAESTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYRLSETKYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL----------------------- 102 L ++ + + D ++ +R +V + ++ G + Sbjct: 112 LVVNAANTEKDFDWIVK-NVRGDVTVSDVSSKYGQLALQGPDAEKILAKLTNIDLNAISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148 + ++ + I R + ++ + + LR Sbjct: 171 FGFVEDAEIAGVKTIISRSGYTGEDGFEIYMPSDDATKVFEAIMAEKVLPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLTRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ D +IG + LA+ I + + + + Sbjct: 288 LIERGIPRHDYPVFLDGKQIGVVTSGTQSPTLGTNIGLALIDIAHTELGQEIEIGIRNKK 347 Query: 262 VRVKASFPHWYK 273 V+ K +YK Sbjct: 348 VKAKVVATPFYK 359 >gi|28868486|ref|NP_791105.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851724|gb|AAO54800.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 409 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + + Sbjct: 90 SHMGQIRLSGADAAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 149 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L IE +L+ + + + + Sbjct: 150 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 208 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 209 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 268 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 269 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 328 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 329 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 388 Query: 259 VHGVRVKASF 268 V + + Sbjct: 389 GKKVPMLVTK 398 >gi|302380835|ref|ZP_07269298.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3] gi|302311330|gb|EFK93348.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3] Length = 364 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 53/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+ Sbjct: 51 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 + + + + + Y +E++ I+ V + + Sbjct: 111 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 168 Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146 D ++ DVL+ RT E + +K ++E Sbjct: 169 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYATAEAIVKLWNELLEKGKDLGVKPCGLG 228 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR + + + P + + + + K ++G+ I +K Sbjct: 229 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 285 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 I + + G+ + D IG + LA A +DK A+ + + Sbjct: 286 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 345 Query: 259 VHGVRVKASF 268 + KA+ Sbjct: 346 IRNKPAKATV 355 >gi|326388269|ref|ZP_08209872.1| putative oxidoreductase protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207435|gb|EGD58249.1| putative oxidoreductase protein [Novosphingobium nitrogenifigens DSM 19370] Length = 817 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 102/319 (31%), Gaps = 63/319 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G+ A+ L + ++ +P + L P+G I I+++ E +F++ S Sbjct: 494 HVEGRDALAVLNRLSANEID-VPVGKLVYTQWLNPRGGIEADVTITRLSETSFMVVTIAS 552 Query: 73 KRDSLIDKLLFYK---------------------------LRSNVIIEIQPINGVVLSWN 105 + + L + L + V + Sbjct: 553 SQRRDMAWLKRHIPDDAHVFAVDVTSGLPALAVMGPKSRDLLAAVSPADFSNEAFPFGTS 612 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------LR 148 +E + R + L + E + + + ++ LR Sbjct: 613 REIDLGYARVRANRVTFVGELGWELFIPAEFATHVFDTLVAAGEAFNLGHAGYFALNSLR 672 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207 + G + D P + + ++ K G +IG+E + R + R+R + + Sbjct: 673 MEKGYRHWSHDIGEEDT-PLEGGLGF--AVAFDKPGGFIGREALLRQKEAGKPRRRLVQL 729 Query: 208 TGTDDLPP---SGSPILTDDIEIGTLGVVVGKK----ALAIARIDK---VDHAIKKGMAL 257 D L P PI + D IG++ +L + I+ VD A +L Sbjct: 730 RLKDPLAPFVYHNEPIWSGDRIIGSVTSGAYGHRIGASLGMGYIEHPEGVDQAFLDAQSL 789 Query: 258 TVHGV----RVKASFPHWY 272 V V+AS WY Sbjct: 790 EVEIAWKRYPVEASLKPWY 808 >gi|116872779|ref|YP_849560.1| glycine cleavage system aminomethyltransferase T [Listeria welshimeri serovar 6b str. SLCC5334] gi|123463749|sp|A0AIE9|GCST_LISW6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|116741657|emb|CAK20781.1| glycine cleavage system T protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 362 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID-------- 117 L ++ + + + ++ +R +V + + G + S D Sbjct: 112 LVVNAANTEKDFEWMVQ-NVRGDVTVTNVSAEYGQLALQGPSAEKILSKLTDVDLSSISF 170 Query: 118 ----------------ERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 R + + + LR Sbjct: 171 FGFIEDVEVAGVKTIISRSGYTGEDGFEIYMASADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLTRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ +D E+G + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNDKEVGIVTSGTQSPTFGTNIGLAL--IDTAYAELGQELEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|213968380|ref|ZP_03396524.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato T1] gi|213927018|gb|EEB60569.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato T1] Length = 409 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + + Sbjct: 90 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 149 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 L ++ + +D + L + L IE +L+ + + + + Sbjct: 150 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 208 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 209 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 268 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 269 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 328 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D D+ IGT+ G A+ D + Sbjct: 329 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 388 Query: 259 VHGVRVKASF 268 V + + Sbjct: 389 GKKVPMLVTK 398 >gi|260430128|ref|ZP_05784103.1| sarcosine dehydrogenase [Citreicella sp. SE45] gi|260419051|gb|EEX12306.1| sarcosine dehydrogenase [Citreicella sp. SE45] Length = 816 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 96/310 (30%), Gaps = 58/310 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G+ A+ F+Q + D+ + + +L +G I ++++ E F Sbjct: 489 MSSFGKIRVEGRDALSFMQTVCANDMD-VAAGRIVYTQMLNARGGIECDLTVTRLSETAF 547 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WNQE 107 L + + + L + S V+I VL N+ Sbjct: 548 FLVVPGATLQRDLAWLRRHVGESFVVITDVSAAETVLPLMGPKSRELLSRASPADFGNEA 607 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 H F + R + L + ++ A +T E Sbjct: 608 HPFGMAREIEIGMGLARAHRVTYVGELGWELYVGTDQAAHVFETLLEAGGDLGLKLCGLH 667 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D +A + + KG IG++ V R + + + R+ Sbjct: 668 AMDSCRIEKGYRHFGHDITDEDHV-LEAGLGF--AVKTGKGASIGRDAVLRKREKGLSRR 724 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI----DKVDHAI 251 +T + L P+L D +G + G L + + Sbjct: 725 LVQFRLTDPEPLLFHNEPVLRDGKIVGHVTSGNYGHTLGGAIGLGYVPCRTPGEPAAEML 784 Query: 252 KKGMALTVHG 261 A+ V G Sbjct: 785 ASSYAIEVAG 794 >gi|170693781|ref|ZP_02884938.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M] gi|170141199|gb|EDT09370.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M] Length = 826 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 53/275 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ A LQ+++T DV +P A + +L +G F +++I D ++L ++ Sbjct: 504 VKGRDAQSVLQSLVTNDVD-VPPGTAVYTGMLNERGNYESDFTLTRIAADQYLLVTGTAQ 562 Query: 74 RDSLIDKLLFYKLRSN--VIIEIQPINGVVLS----------------WNQEHTFSN--- 112 D + R V++++ V+ W E Sbjct: 563 TTRDFDMIERAIPRDKHCVLVDVTSQYAVLAVMGPRSRELLQSVSKADWRNEAFAFGQSR 622 Query: 113 ------SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTY----------HELRI 149 ++ R + L + G E + K + LRI Sbjct: 623 EVDIGYATVRATRLTYVGELGWELYVPVEFAVGVYEALREAGKAFGLVNAGYYAIDSLRI 682 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 G + P T P +A + L K + G++ + +++ +R+R ++++ Sbjct: 683 EKGYRAWGRELTPDT-NPFEAGLAF--ACKLDKDIPFRGRDALLKLRDE-PLRRRMVVLS 738 Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240 G IL D +G + L Sbjct: 739 ADGAADRMLWGGEAILRDGKPVGFVSSAAFGHTLG 773 >gi|313608964|gb|EFR84713.1| glycine cleavage system T protein [Listeria monocytogenes FSL F2-208] Length = 369 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 59 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 118 Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100 L ++ + + ++ Y K+ + + +++ I+ Sbjct: 119 LVVNAANTAKDFEWMVKNIQGDVSVTNVSLEYGQLALQGPNAEKILAKLTDVDLSSIS-- 176 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147 + ++ + I R + + + L Sbjct: 177 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTL 236 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 237 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 293 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260 +P P+ +D EIG + LA+ ID + + + + + Sbjct: 294 ELIERGIPRHDYPVFLNDEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 351 Query: 261 GVRVKASF 268 ++KA Sbjct: 352 NKKIKAKI 359 >gi|330950943|gb|EGH51203.1| glycine cleavage system T protein [Pseudomonas syringae Cit 7] Length = 374 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 49/284 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTHTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIA 242 ++ G+ I+ + IGT+ G A+ Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLTGPLAMGYL 337 >gi|255100785|ref|ZP_05329762.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-63q42] gi|255306669|ref|ZP_05350840.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile ATCC 43255] Length = 824 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++ Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117 L I+ D + ++ Y + I + + E + ID Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170 Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144 R + G + + + Sbjct: 171 FYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P + + + + K +IG+ ++S+ + RK Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 +P +G I D +G + + I + + G+A+ Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347 Query: 259 VHGVRVKASFPHWYK 273 V +YK Sbjct: 348 KKVVPAVIVKKPFYK 362 >gi|126699261|ref|YP_001088158.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile 630] gi|115250698|emb|CAJ68522.1| Bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile] Length = 824 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++ Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117 L I+ D + ++ Y + I + + E + ID Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170 Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144 R + G + + + Sbjct: 171 FYKSIPSIIVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P + + + + K +IG+ ++S+ + RK Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 +P +G I D +G + + I + + G+A+ Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347 Query: 259 VHGVRVKASFPHWYK 273 V +YK Sbjct: 348 KKVVPAVIVKKPFYK 362 >gi|254975289|ref|ZP_05271761.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-66c26] gi|255092679|ref|ZP_05322157.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile CIP 107932] gi|255314416|ref|ZP_05355999.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-76w55] gi|255517094|ref|ZP_05384770.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-97b34] gi|255650198|ref|ZP_05397100.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-37x79] gi|260683322|ref|YP_003214607.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile CD196] gi|260686918|ref|YP_003218051.1| putative bifunctional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile R20291] gi|306520184|ref|ZP_07406531.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile QCD-32g58] gi|260209485|emb|CBA63027.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile CD196] gi|260212934|emb|CBE04200.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile R20291] Length = 824 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++ Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117 L I+ D + ++ Y + I + + E + ID Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170 Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144 R + G + + + Sbjct: 171 FYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + I P + + + + K +IG+ ++S+ + RK Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 +P +G I D +G + + I + + G+A+ Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347 Query: 259 VHGVRVKASFPHWYK 273 V +YK Sbjct: 348 KKVVPAVIVKKPFYK 362 >gi|217964506|ref|YP_002350184.1| glycine cleavage system T protein [Listeria monocytogenes HCC23] gi|254797876|sp|B8DFY0|GCST_LISMH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|217333776|gb|ACK39570.1| glycine cleavage system T protein [Listeria monocytogenes HCC23] gi|307570929|emb|CAR84108.1| glycine cleavage system T protein [Listeria monocytogenes L99] Length = 362 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100 L ++ + + ++ Y K+ + + +++ I+ Sbjct: 112 LVVNAANTAKDFEWMVKNIQGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSIS-- 169 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147 + ++ + I R + + + L Sbjct: 170 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 230 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 286 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260 +P P+ +D EIG + LA+ ID + + + + + Sbjct: 287 ELIERGIPRHDYPVFLNDEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 344 Query: 261 GVRVKASF 268 ++KA Sbjct: 345 NKKIKAKI 352 >gi|323530050|ref|YP_004232202.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001] gi|323387052|gb|ADX59142.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001] Length = 826 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 53/283 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ S + V G+ A LQ ++ DV +P A + +L +G F +++I D + Sbjct: 496 MTSFSKLLVKGRDAQAVLQGLVANDVE-VPPGTAVYTGMLNERGNYESDFTLTRIAADEY 554 Query: 66 ILE----------------IDRSKRDSLIDKLLFYKL------RSN-----VIIEIQPIN 98 +L I R K L+D Y + RS V Sbjct: 555 LLVTGTAQTTRDFDMIEKAIPRDKHCMLVDVTSHYAVLAVMGPRSRELLQSVSKADWRNE 614 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-------GHNEKIASDIKTY------- 144 ++E ++ R + L + G E + K + Sbjct: 615 AFAFGQSREVDIGYATVRATRLTYVGELGWELYVPVEFAIGVYETLREAGKAFGLVNAGY 674 Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-I 200 LRI G + P T P +A + + + G+E + ++ R+ + Sbjct: 675 YAIDSLRIEKGYRAWGRELTPDT-NPFEAGLTFACKLD-RNISFRGRE--ALLKRRDEPL 730 Query: 201 RKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVGKKALA 240 R+R +++T G IL D +G + L Sbjct: 731 RRRMVVLTADGAARHMLWGGEAILRDGKPVGFVSSAAFGHTLG 773 >gi|171914498|ref|ZP_02929968.1| glycine cleavage system protein T [Verrucomicrobium spinosum DSM 4136] Length = 371 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 88/310 (28%), Gaps = 62/310 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A FL +T +V L + + +L QG ++ ++ ++ + + Sbjct: 54 SHMGQFLIEGAGAENFLNRALTNNVSKLGIGDGQYTLMLNDQGGVIDDLIVYRLSDREYF 113 Query: 67 LEIDRSKRDSLIDKLL-------------------------FYK-LRS------------ 88 L ++ S L + + + Sbjct: 114 LVVNASMIAEDEAHLRSLGFGEGVSFANISSATGGLAVQGPKSREVFAAVFGPGAAFPEH 173 Query: 89 -NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDIKTYH 145 ++ + + L F +I + + + + Sbjct: 174 NKILFSLTGEGVLYLCGTGYTGEEGFEFFAPAATIEGWFDKIVQACRDAGGGPAGLGARD 233 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204 LR+ G D P P A + + L K ++G+ V+ + + I K Sbjct: 234 TLRLEMGYPLNGNDLSPDKT-PLQAGLGFF--VDLAKEDFVGKSVLDSQKTQGIPTKLTG 290 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 +T P S P++ + +G +A + A+T Sbjct: 291 FRMTAPSPPPRSHYPVVHEGQVVGETCSAGLSPSLNQGIGMAYLPV-----------AIT 339 Query: 259 VHGVRVKASF 268 G+ ++ Sbjct: 340 KPGIPIEIEI 349 >gi|117924857|ref|YP_865474.1| aminomethyltransferase [Magnetococcus sp. MC-1] gi|117608613|gb|ABK44068.1| aminomethyltransferase [Magnetococcus sp. MC-1] Length = 371 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 94/282 (33%), Gaps = 47/282 (16%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + ++V G A +LQ ++ DV L A + +L G ++ ++ + +E + Sbjct: 57 HMGHVQVSGPQATAYLQFLLCNDVAKLREAGQAIYTGMLNSSGGVIDDLIVYRDDEQHYH 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEH-------------- 108 + ++ + R+ + + R+ V + + P G++ E Sbjct: 117 VVVNAANREGDVQWMQD---RAQDFEGVTVTLDPQLGMIAVQGPEAQQRVAELFAGVELE 173 Query: 109 ---TFSNSSFIDERFSIAD----------------VLLHRTWGHNEKIASDIKTYHELRI 149 TF + R + + L + + LR+ Sbjct: 174 ALKTFRSIIIEGGRIARTGYTGEDGFELIFPAQTIITLWTRLQAMQVPPIGLGARDTLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMIIT 208 G+ +D I P M T ++G++ + ++ ++R +I Sbjct: 234 EAGLNLYGSDM-DHKIDPLACGMGWTVAWEPTTRMFLGRDYLELLRESGGSSQQRVGLIL 292 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDK 246 + +G P+L G + + +A+AR+D Sbjct: 293 TDKGVLRAGQPVLFHGRPSGHVTSGTWSPTLEQGIAMARVDA 334 >gi|302035703|ref|YP_003796025.1| glycine cleavage system aminomethyltransferase [Candidatus Nitrospira defluvii] gi|300603767|emb|CBK40099.1| Aminomethyltransferase, glycine cleavage system T protein [Candidatus Nitrospira defluvii] Length = 369 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 97/323 (30%), Gaps = 64/323 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G ++ FLQ + T DV TL + + S I G I + ++ F+ Sbjct: 49 SHMGRIRVSGPGSLAFLQRVTTNDVSTLSVQQSHYSMICAQNGGIKDDIFVYHVKPYEFL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI----------------IEIQ--------------P 96 + ++ S R+ ++ L V I IQ Sbjct: 109 VCVNASNREKIVTWL-----HEKVEQAQGCKVQDQSASLAQIAIQGPASRDILAAAGIAD 163 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------AS 139 ++ + + + T + S + R L + + E+ + Sbjct: 164 LSTLKIRHCLDATLGDDSLLVTRTGYTGELGYELYLPAERAPKVWEQLLEAGRPLSIKPA 223 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + LR+ + D P +A + + + KG +IG+ + Q + Sbjct: 224 GLGARDLLRLEMAYLLYGNDM-NEETTPIEAGAEWV--VKFDKGDFIGRTELLAQQAQGT 280 Query: 200 IRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVV------VGKKALAIARIDKVDHA 250 R+ +P G IL+ EIG + + Sbjct: 281 ARRLVAFELVEKAVPRHGFKILSAQTPHTEIGEVTSGNLSPLLQKGIGMGYVPPATARPG 340 Query: 251 IKKGMALTVHGVRVKASFPHWYK 273 + + P +YK Sbjct: 341 SSILIDIRGRACPAVVVKPPFYK 363 >gi|284801733|ref|YP_003413598.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 08-5578] gi|284994875|ref|YP_003416643.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 08-5923] gi|284057295|gb|ADB68236.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 08-5578] gi|284060342|gb|ADB71281.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 08-5923] Length = 384 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 74 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 133 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 134 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 192 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 193 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 252 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 253 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 309 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + + Sbjct: 310 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEIGIRN 367 Query: 262 VRVKASF 268 +VKA Sbjct: 368 KKVKAKI 374 >gi|219847204|ref|YP_002461637.1| glycine cleavage system T protein [Chloroflexus aggregans DSM 9485] gi|219541463|gb|ACL23201.1| glycine cleavage system T protein [Chloroflexus aggregans DSM 9485] Length = 367 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 104/317 (32%), Gaps = 54/317 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A FLQ ++T DV T+P A + P G I+ + + D F+ Sbjct: 50 SHMGRFMIRGPQAEAFLQRMVTCDVSTIPLGHAGYGLLCRPDGGIVDDIFLYHLP-DEFM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID--- 117 + ++ + R D L + V IE + +L+ NS+ D Sbjct: 109 MVVNAANRAKDWDWLQQHTTGFEVEIEDRSERWAMLALQGPQAEHLLAGAENSTTADIGS 168 Query: 118 -ERFSIA-------DVLLHRT--------------------------WGHNEKIASDIKT 143 +A + L+ RT G N A + Sbjct: 169 LPFHGVAMTTIFGHNALIARTGYTGEDGFEIFFEAQHAERFWYGLLALGGNAVQACGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR + + TI P++A + + + L KG +IG+E + I+ I R+ Sbjct: 229 RDSLRFEACLALYGHEI-DETINPYEARLGWV--VKLNKGDFIGREALQAIKAAGISRRL 285 Query: 204 PMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMA 256 + SG + +G + + +A D + + Sbjct: 286 VGFEMVEKGIARSGYSVQRVSGETVGFVTSGMPSPTLGRPFGMAYVPTDLSSEGSEFNVV 345 Query: 257 LTVHGVRVKASFPHWYK 273 + VR + +YK Sbjct: 346 IRERPVRARVVKMPFYK 362 >gi|27468140|ref|NP_764777.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis ATCC 12228] gi|57867047|ref|YP_188678.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis RP62A] gi|251810953|ref|ZP_04825426.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis BCM-HMP0060] gi|282876037|ref|ZP_06284904.1| aminomethyltransferase [Staphylococcus epidermidis SK135] gi|293366502|ref|ZP_06613179.1| aminomethyltransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|31340123|sp|Q8CSF4|GCST_STAES RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|61213208|sp|Q5HP12|GCST_STAEQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|27315686|gb|AAO04821.1|AE016748_55 aminomethyltransferase [Staphylococcus epidermidis ATCC 12228] gi|57637705|gb|AAW54493.1| glycine cleavage system T protein [Staphylococcus epidermidis RP62A] gi|251805463|gb|EES58120.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis BCM-HMP0060] gi|281295062|gb|EFA87589.1| aminomethyltransferase [Staphylococcus epidermidis SK135] gi|291319271|gb|EFE59640.1| aminomethyltransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|329725328|gb|EGG61811.1| aminomethyltransferase [Staphylococcus epidermidis VCU144] gi|329735347|gb|EGG71639.1| aminomethyltransferase [Staphylococcus epidermidis VCU045] gi|329737286|gb|EGG73540.1| aminomethyltransferase [Staphylococcus epidermidis VCU028] Length = 363 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+Q I++ D L A SA+ +G I+ + K+ E+ ++ Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + + SN +++ G + + +D S Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPHSRALINELVDIDVSHM 170 Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146 + + + + Sbjct: 171 AMFEFKQNVQIFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLEYDVTPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ + +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIENHFIGKSVLKAQKENGSER 283 Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G +L ++ EIG + K++A+A ID+ + K + Sbjct: 284 RTVGLELLGKGIARTGYDVLDENSNEIGFVTSGTQSPSSGKSIALAIIDRDAFEMGKKVI 343 Query: 257 LTVHGVRVKASF 268 + + +V+A Sbjct: 344 VQIRKRQVEAKI 355 >gi|302869050|ref|YP_003837687.1| glycine cleavage system T protein [Micromonospora aurantiaca ATCC 27029] gi|302571909|gb|ADL48111.1| glycine cleavage system T protein [Micromonospora aurantiaca ATCC 27029] Length = 395 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 86/309 (27%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ I+V G A F+ A +T D+ + A+ + G ++ + +D Sbjct: 84 SHLGKIRVTGPGAADFVNACLTNDLGRITPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 143 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------ 107 L + + + +L V + + VL+ Sbjct: 144 FLVPNAANAAEVARRLRA-AAPEGVTVTDEHEAYAVLAVQGPRSAELLGVLGLPTGHDYM 202 Query: 108 ----HTFSNSSFIDERFSIADVLLHRT----------WGHNEKIASD-----IKTYHELR 148 T R L + W A D + LR Sbjct: 203 SFSTATLDGVELTVCRTGYTGELGYELVVASEHAVAVWDALFAAADDVRACGLAARDTLR 262 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G D P I P + K + G++ + + R + Sbjct: 263 TEMGYPLHGQDLSPE-ITPVQGRSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGLTA 319 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID-KVDHAIKKGMALTVHG 261 +P G + D ++GT+ ALA+ D K+ + + + Sbjct: 320 VDRAIPRPGMAVYAGDRQVGTVTSGTFSPTLKHGVALALVDTDPKLADGDELEVDIRGRR 379 Query: 262 VRVKASFPH 270 R++ + P Sbjct: 380 ARMRLTRPP 388 >gi|218681325|ref|ZP_03529222.1| FAD dependent oxidoreductase [Rhizobium etli CIAT 894] Length = 456 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 95/314 (30%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + + +P + +L +G I +++ E F Sbjct: 131 MTSFGKIRVEGRDACRFLQRLCANQID-VPAGRIVYTQMLNRRGGIESDLTATRLTETAF 189 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 +L + + + L + NV++ VL N Sbjct: 190 LLIVPGATLQRDLAWLRRHVTDENVVVTDMTAAESVLCVMGPTSRQLMQRISPDDFSNDA 249 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 H F + R + L + ++ A + Sbjct: 250 HPFGTAREIEIGMGLARAHRVTYVGELGWELYVSTDQTAHVFEALELAGLDLGLKLCGIH 309 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI D +A + + KG +IG++ V R Q + R+ Sbjct: 310 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTGKGEFIGRDAVLRKQETGVDRR 366 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIKK 253 +T + L I+ D +GT+ G L + + + Sbjct: 367 LVQFKLTEPEPLLFHNEAIIRDGEIVGTITSGNYGHFLGGAIGLGYVPCKGESAAEVLGS 426 Query: 254 GMALTVHGVRVKAS 267 + + G RV+A Sbjct: 427 CYEIEIAGTRVRAE 440 >gi|297584576|ref|YP_003700356.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10] gi|297143033|gb|ADH99790.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10] Length = 364 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 101/318 (31%), Gaps = 56/318 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G + FLQ ++T DV + + +A+ G + + K +++ + Sbjct: 50 SHMGEIEVTGPETLEFLQYVMTNDVKKVKDGRCQYTAVCYETGGTVDDLVWYKRSDESAL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-------------VIIEIQPING-------------- 99 L ++ + + LL + S I +Q Sbjct: 110 LVVNAANEAKDFEWLLKH---SKDFNVQVSNVSSHYAQIALQGPLANQIAQRLSETDLKE 166 Query: 100 -VVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIAS-DI 141 S+ + TF+N+S + R + G E I + Sbjct: 167 IRFFSFKEGVTFANASVLISRTGYTGEDGFEIYCNPNDASHIWKTCLSEGEEEGIQPCGL 226 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR + + + P +A + + +IG++V++R + +R Sbjct: 227 GARDTLRFEATLPLYGQELSSNIS-PVEAGIGFAVKTDVDSR-FIGKDVLARQKEDGPLR 284 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGM 255 K I +P G + ++IG + LA+ + + Sbjct: 285 KSVGIEMIDKGIPRHGYAVSHQGMDIGEVTSGTQSPTLGKNIGLALIDQKYASEGTEVEV 344 Query: 256 ALTVHGVRVKASFPHWYK 273 + VR K +YK Sbjct: 345 QIRKKTVRAKVVQTPFYK 362 >gi|218248559|ref|YP_002373930.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. PCC 8801] gi|257061625|ref|YP_003139513.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. PCC 8802] gi|254797870|sp|B7K468|GCST_CYAP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|218169037|gb|ACK67774.1| glycine cleavage system T protein [Cyanothece sp. PCC 8801] gi|256591791|gb|ACV02678.1| glycine cleavage system T protein [Cyanothece sp. PCC 8802] Length = 369 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 107/308 (34%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ + G + LQ ++ +D+ L A+ + +L PQG I+ ++ + Sbjct: 52 SHMGKFALQGTELLKSLQFLVPSDLERLQPGQAQYTVLLNPQGGIIDDIIVYYQGITETG 111 Query: 62 EDTFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGVV---------- 101 E + ++ + L+ L K+ V+I +Q V Sbjct: 112 EQRANIIVNAGTTEKDKTWLLSHLDTQKITFKDLSGEKVLIAVQGPQSVAKLQAFVQEDL 171 Query: 102 -----LSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144 + + +FI L R+ + Sbjct: 172 SQVGFFGHFEGTVLTKPAFIARTGYTGEDGFEVMVDPEVGQDLWRSLFQAGVTPCGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + + D +T P +A ++ L + +KG +IG++++ + + + + R+ Sbjct: 232 DTLRLEAAMCLYSQDIDDNTT-PLEAGLNWLVHLD-SKGDFIGRDILEKQKAQGVERRLV 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 + + G P+L + +G + KA+A+A + + + + + + Sbjct: 290 GLQMEGRHIARHGYPVLYEGKIVGEVTSGTLPPTVGKAIALAYVPRSLGKVGTPLEVEIR 349 Query: 261 GVRVKASF 268 G +A Sbjct: 350 GQNCQAIV 357 >gi|303237228|ref|ZP_07323798.1| aminomethyltransferase [Prevotella disiens FB035-09AN] gi|302482615|gb|EFL45640.1| aminomethyltransferase [Prevotella disiens FB035-09AN] Length = 361 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 81/271 (29%), Gaps = 56/271 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A F+ I T DV L G ++ I K+ E+ FI Sbjct: 51 SHMGEIIVSGNEAEKFVNYIFTNDVTGLGVGKVIYGMFCMETGGVVDDTCICKVGENEFI 110 Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTF---------- 110 L ++ + D + + KL + G + E Sbjct: 111 LTVNAANIQKDFDWISQHTAGFDIKL-----VNDSEKYGQLAIQGPEAEKIITEKLGIAC 165 Query: 111 -------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 I R +G + I +K + + Sbjct: 166 SDLKFYEVKTMNHDGEEIIISRTGYTGEDGFELYGAPDYI---VKAWDKLMEAGATPCGL 222 Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR G+ + I P A + + + K ++G+E + + + + + Sbjct: 223 GCRDTLRFEAGMPLYGHEL-SEEITPVMAGLSMF--VKFDKENFLGKEALLKQKTEGVTK 279 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + I + +P +G + D EIG + Sbjct: 280 RLRGIWLDDNAIPRNGYKVFKDGKEIGVITT 310 >gi|330899514|gb|EGH30933.1| glycine cleavage system T protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 374 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 43/268 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKNQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVTLLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E + Q + +KR Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGV 232 ++ G+ I+ + IGT+ Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCS 321 >gi|297587560|ref|ZP_06946204.1| aminomethyltransferase [Finegoldia magna ATCC 53516] gi|297574249|gb|EFH92969.1| aminomethyltransferase [Finegoldia magna ATCC 53516] Length = 366 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 97/311 (31%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+ Sbjct: 53 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 + + + + + Y +E++ I+ V + + Sbjct: 113 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVEFDLSKI 170 Query: 117 -------DERFSIADVLLHRT----------WGHNEKIASDIKTY--------------- 144 D ++ DVL+ RT + E I D+ Sbjct: 171 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYATAEAIV-DLWNELLEKGKDLGVKPCGL 229 Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR + + + P + + + + K ++G+ I + Sbjct: 230 GCRDTLRFEAAMPLYGNELA-DEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKVDAGIDK 286 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 K I + + G+ + D IG + LA A +DK A+ + + Sbjct: 287 KLIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDV 346 Query: 258 TVHGVRVKASF 268 + KA+ Sbjct: 347 IIRNKPAKATV 357 >gi|224499928|ref|ZP_03668277.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes Finland 1988] Length = 362 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 101/307 (32%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEAEIGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|307318723|ref|ZP_07598156.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] gi|306895750|gb|EFN26503.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83] Length = 825 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 51/282 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + V G+ A L I ADV + + + +L +G + ++ D F+ Sbjct: 488 TSFAKLLVQGRDAAKTLNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546 Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99 + ++ D + Y + + + G Sbjct: 547 IVTGSAQAVHDTDWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARDILGRITSADLSNAG 606 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145 + +E ++ R + L +E + H Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666 Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201 LRI G + + P I PH+A + +S K G +IG+E + R + Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKQAGAPV 723 Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241 +R + T D P G IL D +G + L + Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765 >gi|94969488|ref|YP_591536.1| glycine cleavage system aminomethyltransferase T [Candidatus Koribacter versatilis Ellin345] gi|254797862|sp|Q1INT8|GCST_ACIBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|94551538|gb|ABF41462.1| glycine cleavage system T protein [Candidatus Koribacter versatilis Ellin345] Length = 380 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 106/313 (33%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A+ +Q + D L A+ SA+L P G + ++ K +D ++ Sbjct: 60 SHMGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYL 119 Query: 67 LEIDRSKRDSLIDKLL----FYKLR------------------------------SNVII 92 L I+ R+ ++ + +K+ S V Sbjct: 120 LVINAGTREKDVNWVKDNTRQFKVTVEDLSDQFTQIAIQGPKGVDTLQKLTDVDLSKVKF 179 Query: 93 ------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK----IASDIK 142 + + V+++ + + K + + + Sbjct: 180 YWFTRGTVAGLKNVLIARTGYTAEDGFEIYIPSDAATSDRVWNELLQAGKEFGVVPAGLG 239 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + + LR+ + + +A +D + + KG +IG+ + + ++ + R Sbjct: 240 SRNTLRLEGKLPLYGHEISDEINVW-EAGLDRF--LKMDKGDFIGRAALEKAKNDGVKRA 296 Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 + T +P G +L + EIG + ALA +++ A+ + Sbjct: 297 LVGLETIERGIPRDGYKVLDLEGKEIGYVTSGSYMPFLKRNLALAYVPVEQ--SALDNIV 354 Query: 256 ALTVHGVRVKASF 268 A+ + VKA Sbjct: 355 AVEIRNQPVKAKV 367 >gi|260590760|ref|ZP_05856218.1| glycine cleavage system T protein [Prevotella veroralis F0319] gi|260537246|gb|EEX19863.1| glycine cleavage system T protein [Prevotella veroralis F0319] Length = 361 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 86/263 (32%), Gaps = 40/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ I T DV LP + P G ++ I K+E+ F+ Sbjct: 51 SHMGEVLVTGSEAEKYINHIFTNDVKGLPAGKVLYGMMCYPDGGVVDDTCICKLEDQVFL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111 + I+ S D I + +V+I+ + N L+ + Sbjct: 111 MTINASNIDKDIAWIEKNAAGFDVVIKNKSENYGQLALQGPEAEAKIESVLGISTKELNF 170 Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149 I R +G + I LR Sbjct: 171 YEVRQVKTDGEVIIVSRTGYTGEDGFEIYGSPKYINEAWDKLIAAGITPCGLGCRDTLRF 230 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + I P A + + + L K +IG++ + + + + ++ I+ Sbjct: 231 EVGLPLYGNEL-SDKISPVMAGLSMF--VKLDKEEFIGKDALQKQKAEGVSQRLRGIVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232 + +P G ++ D E+G + Sbjct: 288 GNAIPRHGYKVMKDGKEVGVVTT 310 >gi|242373840|ref|ZP_04819414.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis M23864:W1] gi|242348394|gb|EES39996.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis M23864:W1] Length = 363 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 113/310 (36%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D F+ Sbjct: 53 SHMGEIEISGNEAFQFVQYILSNDANNLTDNKAMYTALCNEEGGIIDDLVTYKLADDRFL 112 Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLRS----NVIIEIQPING 99 L ++ + D + + Y K R NV I++ + Sbjct: 113 LIVNAANTDKDFNWISKQSENFDVKVNNTSDEYGQLAIQGPKARDLVNENVDIDVSDMKM 172 Query: 100 V-----VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 V + ++ S S + E S V + + + + LR Sbjct: 173 FEFKQNVDLFGKKVILSQSGYTGEDGFEIYCKSEDTVDIWNQLLKHNVVPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + ++ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEDNFIGKSVLKDQKENGSTKRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G +L + +IG + K++A+A ID+ + K + + Sbjct: 286 VGLELLDKGIARTGYEVLNLEGNQIGVVTSGTQSPSSDKSIALAIIDRDAFEMGKEVLVQ 345 Query: 259 VHGVRVKASF 268 V +VKA Sbjct: 346 VRKRQVKAKI 355 >gi|73662527|ref|YP_301308.1| glycine cleavage system aminomethyltransferase T [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642669|sp|Q49XY1|GCST_STAS1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|72495042|dbj|BAE18363.1| putative glycine cleavage system T protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 363 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 96/295 (32%), Gaps = 51/295 (17%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M +S+ I + G A +Q +++ D + A+ +A+ QG I+ + K+ Sbjct: 47 MGLFDVSHMGEIIIKGSDASNLVQYLLSNDTDNVTTHKAQYTALCNEQGGIIDDLITYKL 106 Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---KLRSNVIIEIQPINGVVLSWNQEH--------- 108 EE+ ++L ++ + + Y K +I + G + + Sbjct: 107 EENVYLLVVNAGNTEKDFEW--MYEKAKAFDAEVINVSTEYGQLAIQGPKARDLVQQYVN 164 Query: 109 ----------------------TFSNSSFIDER----FSIADVL--LHRTWGHNEKIASD 140 S S + E + AD L N+ Sbjct: 165 IDVSEMKPFEFEQNVEFFGKNVILSQSGYTGEDGFEIYCNADDAPYLWDEILKNDVTPCG 224 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ G+ D TI P++A + L + +IG+ V+ + Sbjct: 225 LGARDTLRLEAGLPLHGQDL-SETITPYEAGI-AFAAKPLIEADFIGKSVLKDQKENGSK 282 Query: 201 RKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVD 248 R+ + +P +G + D +IG + LA+ D + Sbjct: 283 RRTVGLEMIDKGIPRTGYEVYDLDGNQIGEITSGTQSPLTGKSIGLALINRDAFE 337 >gi|254829895|ref|ZP_05234550.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes 10403S] Length = 362 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEIGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|209550887|ref|YP_002282804.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536643|gb|ACI56578.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 817 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 95/314 (30%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + + +P + +L +G I +++ E F Sbjct: 492 MTSFGKIRVEGRDACRFLQRLCANQID-VPAGRIVYTQMLNHRGGIESDLTATRLTETAF 550 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 +L + + + L + NV++ VL N Sbjct: 551 LLIVPGATLQRDLAWLRRHVADENVVVTDMTAAESVLCVMGPESRQLMQRVSPDDFSNDA 610 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 H F+ + R + L + ++ A + Sbjct: 611 HPFATAREIEIGMGLARAHRVTYVGELGWELYISTDQAAHVFEALELAGLDLGLKLCGIH 670 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D +A + + +G +IG++ V Q + R+ Sbjct: 671 TLDSCRIEKGFRHFGHDITDEDHV-LEAGLGF--AVKTGQGEFIGRDAVLHKQETGVDRR 727 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIKK 253 +T + L I+ D +GT+ G L + + Sbjct: 728 LVQFKLTDPEPLLFHNEVIVRDGEIVGTITSGNYGHFLGGAIGLGYVPCEGESAAEVLGS 787 Query: 254 GMALTVHGVRVKAS 267 + + G RV+A Sbjct: 788 FYEIEIAGTRVRAE 801 >gi|47095931|ref|ZP_00233534.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a F6854] gi|254898487|ref|ZP_05258411.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes J0161] gi|254912022|ref|ZP_05262034.1| glycine cleavage system T protein [Listeria monocytogenes J2818] gi|254936349|ref|ZP_05268046.1| glycine cleavage system T protein [Listeria monocytogenes F6900] gi|47015677|gb|EAL06607.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a F6854] gi|258608940|gb|EEW21548.1| glycine cleavage system T protein [Listeria monocytogenes F6900] gi|293589988|gb|EFF98322.1| glycine cleavage system T protein [Listeria monocytogenes J2818] Length = 362 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSEMEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|108805964|ref|YP_645901.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941] gi|122381242|sp|Q1AR89|GCST_RUBXD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|108767207|gb|ABG06089.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 372 Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 92/302 (30%), Gaps = 45/302 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A LQ ++T DV L A +A+ G + + + E F+ Sbjct: 57 SHMGEVAFRGPDAERALQRLLTRDVSRLGEGQAGYAAVCLESGGTVDDVIAYRRGE-GFL 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFSN 112 + ++ + R+ + + +V I + +L+ Sbjct: 116 VVVNAANREKDLAHFRRHTADLDVEISDETEEWALLALQGPEAERLLQPFVAGDLSALGR 175 Query: 113 SSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY----------------HELRI 149 F++ + ++ RT E + A + LR+ Sbjct: 176 YRFLETHVDGGEAIVARTGYTGEDGFEVFLRPAEAPSLWRRLVEAGAAPAGLGARDTLRL 235 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + P +A + + L K ++GQ + R + R +RK+ + Sbjct: 236 EAGMCLYGNEL-DEETTPLEAGISF--AVHLHKEEEFVGQRALQRQRERG-LRKKLVGFE 291 Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKA 266 + G P+ G + L + V + G + + V A Sbjct: 292 LEGRGIARHGYPVAVGGERAGVVTSGTMSPTLGRAIGLAYVPPETEGGFEVLIRERPVPA 351 Query: 267 SF 268 Sbjct: 352 RI 353 >gi|315282209|ref|ZP_07870666.1| glycine cleavage system T protein [Listeria marthii FSL S4-120] gi|313614144|gb|EFR87831.1| glycine cleavage system T protein [Listeria marthii FSL S4-120] Length = 362 Score = 72.2 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKVGKAQYNIMCYETGGTVDDLVVYKKAETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L ++ + + + ++ +R +V + + G + S D S Sbjct: 112 LVVNAANTEKDFEWMVK-NVRGDVTVTNVSSEFGQLALQGPNAEKILSKLTDVDLSAISF 170 Query: 123 ------ADVLLHRTWGHNEKIASD----------------------------IKTYHELR 148 ADV +T + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIDQKEAGLARKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ EIG + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNEQEIGVVTSGTQSPTLGTNIGLAL--IDTAYTELDQELEVGIRN 345 Query: 262 VRVKASF 268 ++KA Sbjct: 346 KKIKAKV 352 >gi|310657740|ref|YP_003935461.1| aminomethyltransferase [Clostridium sticklandii DSM 519] gi|308824518|emb|CBH20556.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Clostridium sticklandii] Length = 365 Score = 72.2 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 105/312 (33%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V GK A F Q I T D+ L S + G ++ L+ K +D F+ Sbjct: 53 SHMGEIEVKGKDAEEFCQKICTNDISKLEDNQILYSFMCYENGTVVDDILVYKFSQDDFM 112 Query: 67 LEIDRS-----------------------------------KRDSLIDKLL--------- 82 L ++ K ++++ K Sbjct: 113 LVVNAGNISKDYEWIVNHTTGYEVNINNISDNIGQVAVQGPKAEAILQKFTDTDLSEIKF 172 Query: 83 FYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140 FY LR ++I+ IN +V + E F + + ++L + + + Sbjct: 173 FYALR---NVDIKGINTIVSRTGYTGEDGFEIYCEAKDSVKLWKLILDESP-EEDILPIG 228 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR + + I P +A + L K +IG+E + + + Sbjct: 229 LGARDTLRFEANLPLYGNEL-SDEITPIEAGYGYF--VKLDKDDFIGKEALKAQKSEGLK 285 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 RK + G + ++ +IG + K++ +A ID A+ + Sbjct: 286 RKIVGFELLDKRISRHGYEVYLENDKIGIVTTGYQSPTLQKSIGLALIDAQYVALGNEIY 345 Query: 257 LTVHGVRVKASF 268 + + +V A Sbjct: 346 IDIRNKKVPAKI 357 >gi|16803388|ref|NP_464873.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes EGD-e] gi|224501709|ref|ZP_03670016.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL R2-561] gi|254827609|ref|ZP_05232296.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL N3-165] gi|24636859|sp|Q8Y7D5|GCST_LISMO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|16410764|emb|CAC99426.1| lmo1348 [Listeria monocytogenes EGD-e] gi|258599987|gb|EEW13312.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL N3-165] Length = 362 Score = 71.8 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKI 352 >gi|212224645|ref|YP_002307881.1| glycine cleavage system aminomethyltransferase T [Thermococcus onnurineus NA1] gi|229807555|sp|B6YY21|GCST_THEON RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|212009602|gb|ACJ16984.1| glycine cleavage system protein T [Thermococcus onnurineus NA1] Length = 398 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 80/333 (24%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D + Sbjct: 59 GKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFE 118 Query: 76 SL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLSW 104 L I + + + K R + + +I IN + Sbjct: 119 KLEAWFNAIKRGIEKFGELDLEIENKTYDMAMFSIQGPKARDLAKDLFDI-DINDLWWFQ 177 Query: 105 NQEHTFSNSSFIDERFSIADVLL-----------HRTWGHNEKIASDIKTY--------- 144 +E + R H + + + Sbjct: 178 AKEVELDGIKMLLSRSGYTGENGFEVYFEDANPYHPDPERRGEPEKALHVWKTILEAGEK 237 Query: 145 -----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCY 185 LR+ G + + P A +D I K + Sbjct: 238 YGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE-F 294 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKAL 239 IG+E + + + R I RK +P G + + IG + + Sbjct: 295 IGKEALLKQRERGIPRKLVHFKMIDKGIPREGYKVYANGELIGEVTSGTSSPLLGIGIGI 354 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A + + ++ + + + P +Y Sbjct: 355 AFVKTEYAKPGVEIEVEIRGKPKKAVTVAPPFY 387 >gi|255030068|ref|ZP_05302019.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes LO28] Length = 342 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 32 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 91 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102 L ++ + D + ++ +R +V + + G + Sbjct: 92 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 150 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 151 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 210 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 211 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 267 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ ++ +IG + LA+ ID + + + + + Sbjct: 268 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 325 Query: 262 VRVKASF 268 +VKA Sbjct: 326 KKVKAKI 332 >gi|156742257|ref|YP_001432386.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM 13941] gi|156233585|gb|ABU58368.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM 13941] Length = 370 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 93/272 (34%), Gaps = 54/272 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A+PFLQ ++T DV + A + + P G I+ I + D ++ Sbjct: 55 SHMGEVEVRGPDALPFLQHLVTYDVAAIQPGEANYALMCLPNGGIIDDTFIYNLG-DYYL 113 Query: 67 LEIDRS-----------------------------------KRDSLIDK--------LLF 83 + ++ + + L+ + L F Sbjct: 114 IVVNAANTAKDVAWMHECAKGFQVMVADASDRTGMLALQGPAAEGLLAQVAGADLAALPF 173 Query: 84 YKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 + +R + I +V + E F D+ + D LL+ + + Sbjct: 174 HGVRR---GTVSGIPAIVARTGYTGEDGFELFVAADDVGRLWDALLN-AGRNAGLKPCGL 229 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR + + P++A + + + L KG +IG++ + RI+ + R Sbjct: 230 GARDSLRFEACLALYGHEIT-EETNPYEARLGWV--VKLDKGDFIGRDALQRIKQEGVRR 286 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232 + + S I + + +G + Sbjct: 287 RLTGFEMVGRGIARSEYEIRDLEGMPVGRVTS 318 >gi|15606994|ref|NP_214376.1| hypothetical protein aq_2004 [Aquifex aeolicus VF5] gi|2984247|gb|AAC07775.1| hypothetical protein aq_2004 [Aquifex aeolicus VF5] Length = 153 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + + ++ + E RI + + + + P +A + L ISL KGCY+GQE ++R Sbjct: 17 PQDKEASVEDFEEERIKNCVPRIHKELREG-FSPLEAGV-LPYAISLNKGCYVGQEAIAR 74 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIA---RIDKVD 248 + R + + + IL + IG + V GK AL + +K Sbjct: 75 VYFRGRTPRVLTKFEVIEQVKEE-EKILEGNKAIGLITSVSPSGKMALGYILRAKFEKGK 133 Query: 249 HAIKKGMALTVHGV 262 + + GV Sbjct: 134 EYQTESGKVKAKGV 147 >gi|319400876|gb|EFV89095.1| glycine cleavage system T protein [Staphylococcus epidermidis FRI909] Length = 363 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 106/312 (33%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+Q I++ D L A SA+ +G ++ + K+ E+ ++ Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNEEGGVIDDLVTYKLNENHYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + + SN +++ G + + +D S Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPRSRALINELVDVDVSHM 170 Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146 + + + + Sbjct: 171 AMFEFKQNVQLFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLKYDVTPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIANDFIGKSVLKAQKENGSER 283 Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G +L ++ +IG + K++A+A ID+ + K + Sbjct: 284 RTVGLELLGKGIARTGYEVLDENSNQIGFVTSGTQSPSSGKSIALAIIDRGAFEMGKKVI 343 Query: 257 LTVHGVRVKASF 268 + + +V+A Sbjct: 344 VQIRKRQVEAKI 355 >gi|261879403|ref|ZP_06005830.1| glycine cleavage system T protein [Prevotella bergensis DSM 17361] gi|270333971|gb|EFA44757.1| glycine cleavage system T protein [Prevotella bergensis DSM 17361] Length = 361 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 53/304 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A ++ I T DV P +L P G + L+ K+ + F Sbjct: 50 SHMGEVFVRGKDAERYINHIFTNDVTGAPIHQIYYGMMLYPDGGTVDDLLVYKMGDQEFF 109 Query: 67 LEIDRSKRDSLIDKL---------------LFYKLRS-------NVIIEIQPIN--GVVL 102 + I+ + D ++ + Y + V+ E+ + + Sbjct: 110 VVINAANIDKDVEWMMSNKEGFDVEIDHASERYGQLAVQGPESEKVLAEVLGWDCSDLKF 169 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 + I R +G ++ I ++ + + Sbjct: 170 YTAKTIDTGQEEIIISRTGYTGEDGFEIYGSHDFI---VEQWDKLMASGQCVPCGLGCRD 226 Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR G+ + I P A + + K +IG+E V++ + + Sbjct: 227 TLRFEVGLPLYGDEL-SDKISPVMAGLSMFC--KFDKPEFIGKEAVAKQKEEGPAMRLRG 283 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG-VRV 264 I +P G +L D E+G + + +DK +L + V V Sbjct: 284 IEMEDRAVPRHGYKVLKDGKEVGEVTT-----GYRLISVDKSCAVALVDASLKLGDKVEV 338 Query: 265 KASF 268 + Sbjct: 339 QIRK 342 >gi|312144692|ref|YP_003996138.1| glycine cleavage system T protein [Halanaerobium sp. 'sapolanicus'] gi|311905343|gb|ADQ15784.1| glycine cleavage system T protein [Halanaerobium sp. 'sapolanicus'] Length = 364 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 51/298 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A LQ IIT D L + I G I+ ++ K++++ F+ Sbjct: 56 SHMGELLLTGGGAEKSLQRIITNDAQLLDKGKVLYTLICNENGGIIDDLVVYKLQKNKFL 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 L ++ S + D + + L ++ IE + + +L+ Sbjct: 116 LVVNASNTEKDFDWIKEH-LDNDAQIENRTEHYAMLALQGPDSQKVLTKLTDLNLQEINY 174 Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHN-----------------EKIASDIKTYH 145 E + I R L + + E + + + Sbjct: 175 YRFKEGKVAGKDMIISRTGYTGELGYELYFKAEYAEKIWHDIIKAGKKFEILPAGLGARD 234 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D I P+ A + + + L KG +IG+E + ++ + I R+R Sbjct: 235 TLRLEKGFPLYGNDI-DENIDPYQAKLGWV--VKLDKGDFIGKEKLKELKRKGIKRERTG 291 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 + + G I +D EIG + A+ + D ++ K G+ + Sbjct: 292 FMIQGRGVARKGHKIYCEDQEIGEVSSGSYSPLLKKGIAMGYIKSDYIEPGNKVGIKV 349 >gi|240102407|ref|YP_002958716.1| glycine cleavage system aminomethyltransferase T [Thermococcus gammatolerans EJ3] gi|259647497|sp|C5A3P0|GCST_THEGJ RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|239909961|gb|ACS32852.1| Glycine cleavage system T protein (aminomethyltransferase) (gcvT) [Thermococcus gammatolerans EJ3] Length = 398 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 98/334 (29%), Gaps = 80/334 (23%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNLGNDTYMMVCDSDAF 117 Query: 75 DSL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLS 103 + L I + + + K R + + I IN + Sbjct: 118 EKLEAWFNAIKRGIEKFGSIDLEIENKTYDMAMFSVQGPKARDLAKDLFGI-DINDLWWF 176 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHN---------------------EKIASDIK 142 +E + R + + E+I + + Sbjct: 177 QAKEVELDGIKMLLSRSGYTGENGWEVYFEDKNPYHPNPEKRGRPEKALHVWERILEEGE 236 Query: 143 TY----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGC 184 Y LR+ G + + P A +D I K Sbjct: 237 KYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE- 293 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKA 238 +IG+E + + + R + RK +P G +L + IG + Sbjct: 294 FIGKEALLKQKERGLGRKMVHFKMVDRGIPREGYKVLANGEVIGEVTSGTLSPLLGIGIG 353 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + ++ + + R P +Y Sbjct: 354 IAFVKEEYAKPGLEIEVEIRGKPKRAVTVSPPFY 387 >gi|237799876|ref|ZP_04588337.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022731|gb|EGI02788.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 374 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLSGADAARSLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + L + IE +L+ + + + + Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAGMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L E + LR+ Sbjct: 174 QFASVKLLGMQCYVSRSGYTGEDGYEISVPAEHAETLARCLLKEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E++ Q + +KR Sbjct: 234 EAGLCLYGHDMDAQTSPIQASLLWAISKVRRADGARAGGFPGAELIFAQQANGVDKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + D IG + G A+ D + Sbjct: 294 LLPQERTPVREGTQIVDEQDSVIGKVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353 Query: 259 VHGVRVKASF 268 V ++ S Sbjct: 354 GKKVPMRVSK 363 >gi|138896001|ref|YP_001126454.1| glycine cleavage system aminomethyltransferase T [Geobacillus thermodenitrificans NG80-2] gi|196248894|ref|ZP_03147594.1| glycine cleavage system T protein [Geobacillus sp. G11MC16] gi|166221553|sp|A4IQV5|GCST_GEOTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|134267514|gb|ABO67709.1| Aminomethyltransferase, glycine cleavage system protein T [Geobacillus thermodenitrificans NG80-2] gi|196211770|gb|EDY06529.1| glycine cleavage system T protein [Geobacillus sp. G11MC16] Length = 365 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 98/311 (31%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G ++PFLQ ++T DV L + + + + LI + ED ++ Sbjct: 50 SHMGEIIVRGGGSLPFLQKLMTNDVAKLRPGRVQYTLMCDESAGTVDDLLIYQKGEDDYL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFSN 112 L ++ + + L + +V +E +L+ Sbjct: 110 LVVNAANTEKDFAWLSEHA-DGDVELEDVSAETALLALQGPAAERVLQKLTDMDLSALRP 168 Query: 113 SSFID-----------ERFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 SF D R + E + + Sbjct: 169 FSFQDGVEVASVKTLVSRTGYTGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKR 203 LR + + +TI P +A + + K +IGQ V+ + + R+ Sbjct: 229 DTLRFEACLPLYGQEL-SATISPLEAGLGF--AVKTEKEPPFIGQAVLKQQKEAGPPRRL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257 I +P G + E G + LA+ + + AI + + + Sbjct: 286 VGIEMIDKGIPRHGYRVFAAGEEAGFVTTGTQSPTLKKNIGLALVKAEVA--AIGQEVEV 343 Query: 258 TVHGVRVKASF 268 + G R+KA+ Sbjct: 344 DIRGKRLKATI 354 >gi|289642160|ref|ZP_06474311.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata] gi|289508006|gb|EFD28954.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata] Length = 460 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 7/116 (6%) Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 + + + R+ + PH+ L + L KGCY GQE V+ Sbjct: 306 AAGASLAGVGAFEAARVADRRPRLGAE-TDHRTIPHEVGW-LTTAVHLDKGCYRGQETVA 363 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243 R+ + +R +++ G+P+ +G +G V G ALAI + Sbjct: 364 RVHNLGRPPRRMVLLHLDGTTVARGAPVSGGGRTVGFVGTSVVHAELGPIALAIVK 419 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 6/135 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ +++ G + +L +I + + LP + +L+P G + + +I+ + Sbjct: 74 SHRGVLRITGVDRLSWLHSITSQHLAALPAMRGSEALVLSPHGHVEHHLMIA-DDGTATW 132 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L+++ +L+ L + V +++ + V+ + F+ D Sbjct: 133 LDVEPGTSTALLAYLESMRFLLRVEPVDVHADHAVLSVLGPAAVD----VVASAFAPLDP 188 Query: 126 LLHRTWGHNEKIASD 140 LHR + + D Sbjct: 189 PLHRPARRDVTVGYD 203 >gi|146306375|ref|YP_001186840.1| glycine cleavage system T protein [Pseudomonas mendocina ymp] gi|145574576|gb|ABP84108.1| glycine cleavage system T protein [Pseudomonas mendocina ymp] Length = 374 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 43/268 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A L+ ++ D++ LP + R + QG IL +++ + +DT Sbjct: 55 SHMGQILLRGEHAARALETLVPVDIIDLPVGLQRYAMFTDAQGGILDDLMVANLGDDTLY 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + + IE +L+ + + S Sbjct: 115 LVVNAACKDQDLAHLKKH-IGEQCQIECLFEERALLALQGPKAVDVLARLAPEVSKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L E A + LR+ Sbjct: 174 QVARVRLLGSECIVSRSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +T +L+ ++ + G + G E V Q + + RKR Sbjct: 234 EAGLCLYGHDMSSATTPIEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVG 293 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ G+ I+ D IG + Sbjct: 294 LLPQERVPVREGAEIVDADGTVIGQVCS 321 >gi|187919688|ref|YP_001888719.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN] gi|187718126|gb|ACD19349.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN] Length = 831 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 91/280 (32%), Gaps = 63/280 (22%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ A LQ ++ DV +P +A+L +G F ++++ +D ++L ++ Sbjct: 509 VKGRDAQSVLQGLVANDVD-VPNGTTVYTAMLNERGGYESDFTLTRLADDQYLLVTGTAQ 567 Query: 74 RDSLIDKLLF----------------YKL------RSN-----VIIEIQPINGVVLSWNQ 106 D + Y + RS V ++ Sbjct: 568 TTRDFDSIEKSIPHDRHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149 E ++ R + L + E +T H LRI Sbjct: 628 ELDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-----IQHRNI-IRKR 203 G + P T P +A G+S C + +++ R ++ R +R+R Sbjct: 688 EKGYRAWGRELTPDT-NPFEA------GLSF--ACKLDKDIAFRGRDALLKLRAEPLRRR 738 Query: 204 PMIIT---GTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 ++++ TD + G IL D +G + L Sbjct: 739 MVVLSANGATDRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778 >gi|31340124|sp|Q8CXD9|GCST_OCEIH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 371 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 56/295 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FLQ ++T D+ L A+ + + G + ++ K++++ ++ Sbjct: 52 SHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYL 111 Query: 67 LEIDRS--------------------------------------KRDSLID-------KL 81 L ++ + + L ++ Sbjct: 112 LVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQKCTDENVQEI 171 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-D 140 F++ ++NV ++ ++ +ID +A L G + Sbjct: 172 KFFRFKNNVALKGIEAKALISRTGYTGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIG 231 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199 + LR + + I P +A + + + KG +IG+EV+ Sbjct: 232 LGARDTLRFEANLALYGQEL-SKDISPIEAGLGF--AVKVNKGPDFIGKEVLKNQVENGT 288 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248 RK I +P +L D+ EIG + LA+ I + Sbjct: 289 DRKLVGIEMIDKGIPRHEYEVLKDNKEIGFITSGTQSPTLNKNVGLALINISYTE 343 >gi|23099359|ref|NP_692825.1| aminomethyltransferase [Oceanobacillus iheyensis HTE831] gi|22777588|dbj|BAC13860.1| aminomethyltransferase (glycine cleavage system T-protein) [Oceanobacillus iheyensis HTE831] Length = 385 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 56/295 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FLQ ++T D+ L A+ + + G + ++ K++++ ++ Sbjct: 66 SHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYL 125 Query: 67 LEIDRS--------------------------------------KRDSLID-------KL 81 L ++ + + L ++ Sbjct: 126 LVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQKCTDENVQEI 185 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-D 140 F++ ++NV ++ ++ +ID +A L G + Sbjct: 186 KFFRFKNNVALKGIEAKALISRTGYTGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIG 245 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199 + LR + + I P +A + + + KG +IG+EV+ Sbjct: 246 LGARDTLRFEANLALYGQEL-SKDISPIEAGLGF--AVKVNKGPDFIGKEVLKNQVENGT 302 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248 RK I +P +L D+ EIG + LA+ I + Sbjct: 303 DRKLVGIEMIDKGIPRHEYEVLKDNKEIGFITSGTQSPTLNKNVGLALINISYTE 357 >gi|172039259|ref|YP_001805760.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. ATCC 51142] gi|171700713|gb|ACB53694.1| glycine cleavage system protein T [Cyanothece sp. ATCC 51142] Length = 369 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 45/278 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ P LQ+++ +D+ L A+ + +L P G I+ ++ E+ + Sbjct: 58 SHMGKFTLEGEGLFPMLQSLVPSDLERLTPGKAQYTVLLNPDGGIIDDIIVYCQGEEKAV 117 Query: 67 LEIDRSKRDSLIDK---------LLFYKLRS-NVIIEIQPINGV---------------V 101 + ++ + +D L F + S V++ IQ V Sbjct: 118 IIVNAATKDKDKKWILSNLGATSLNFTDVSSQKVLLAIQGPETVEKLQPLVEADLTQLSF 177 Query: 102 LSWNQEHTFSNSSFIDER------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 +FI L R+ + LR+ Sbjct: 178 FGHTDTEVLGYPAFIARTGYTGEDGFEVMIDPEGGQELWRSLLQAGVTPCGLGARDTLRL 237 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + D T P +A + L + KG ++G+EV+ + Q +++R + + Sbjct: 238 EAAMSLYGQDIDDHTT-PLEAGLKWLVHLD-KKGEFMGREVLEK-QATEGVKRRLVGLEM 294 Query: 210 TD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIA 242 + G + ++ +G + KA+A+A Sbjct: 295 EGRHIARHGYSVASEGKIVGEVTSGTIGPTVGKAIALA 332 >gi|114778855|ref|ZP_01453654.1| glycine cleavage system T protein [Mariprofundus ferrooxydans PV-1] gi|114550890|gb|EAU53455.1| glycine cleavage system T protein [Mariprofundus ferrooxydans PV-1] Length = 363 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 97/307 (31%), Gaps = 56/307 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + ++V G +A+ FLQ + T DV L SA+L G + KI + + L Sbjct: 55 HMGQVRVSGPAALAFLQYVTTNDVSKLATGQVHYSALLNESGTFIDDITTYKISDTVYYL 114 Query: 68 EIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 I+ + R + LL + +R +++ ++ + +D+ Sbjct: 115 CINAANRHKDVAHLLAEANNFDVR---VVDESDETTLLALQGAAAQQALQPLVDQDLESI 171 Query: 124 D------------------------------------VLLHRTWGHNEKIASDIKTYHEL 147 V + + L Sbjct: 172 GYYKFAQVSVNGVSGIVSRTGYTGEDGFEIYIPNSNAVAVWTRLLAAGAEPIGLAARDML 231 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G + + P +A + + L KG +IG+E V + R+R + I Sbjct: 232 RTEMGYALYGHEI-SDAVTPVEAKLMWI--TKLDKGDFIGREAVVARRAEG-ARQRLIAI 287 Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHG 261 T +P + D + G + G ALA + + D + +A+ + G Sbjct: 288 RLTGRGIPREHYKVFVDGAQSGEVTSGMHSPMAGGVALAYVKPEHAD---QGELAVEIRG 344 Query: 262 VRVKASF 268 V A Sbjct: 345 KLVAAER 351 >gi|254470902|ref|ZP_05084305.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio sp. JE062] gi|211960044|gb|EEA95241.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio sp. JE062] Length = 824 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 92/317 (29%), Gaps = 56/317 (17%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S+ I+V G A L + D+ ++P + L +G I ++++ E Sbjct: 489 LYDMSSFGKIRVEGPDAESLLNHMCGGDM-SVPVGKIVYTQFLNERGGIEADLTVTRLSE 547 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-----------------WN 105 ++L + + L +K +NV+I L W+ Sbjct: 548 TAYLLVTPAATVVRELSWLNKHKAGANVVITDITAGEATLVVMGPNSRELLSKVSNHDWS 607 Query: 106 ---------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------ 144 QE R S L + + A +T Sbjct: 608 NENHPFGTMQEIELGMGLARAHRVSYVGELGWELYVSTDMAAHAYETLIEAGADLDLKLC 667 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 LRI G D +A + +S K +IG++ V R + + Sbjct: 668 GLHAMDSLRIEKGFRHFGHDITEEDHV-LEAGLGF--AVSTKKPSFIGRDAVLRKKEEGL 724 Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHA 250 + + + L P+L D +G L G L + + + Sbjct: 725 SSRMLQFKLKDAEPLLHHNEPVLRDGEIVGYLTSGNYGHTLGGAVGLGYVPCKGETIKDM 784 Query: 251 IKKGMALTVHGVRVKAS 267 + + V G A Sbjct: 785 LASTYQIDVEGTLCDAE 801 >gi|160946853|ref|ZP_02094056.1| hypothetical protein PEPMIC_00814 [Parvimonas micra ATCC 33270] gi|158447237|gb|EDP24232.1| hypothetical protein PEPMIC_00814 [Parvimonas micra ATCC 33270] Length = 367 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 94/314 (29%), Gaps = 57/314 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A ++ +IT D+ T+ S + G ++ L+ + +D Sbjct: 51 SHMGEVTVKGKDAFDYVNHLITNDLTTIGDGQVIYSLLCNENGGVVDDLLVYRKGKDDMY 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 + ++ + D L K +V I+ ++ Sbjct: 111 IVVNAANTDKDFAWFLKQKGNYDVEIKNISSETAQIALQGPKAEKILQKLAKDVDLANEI 170 Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 F+ R +G E + K + E Sbjct: 171 KFFTFKENVQLGDCGKFLVSRTGYTGEDGFEIYGSGEDMN---KLWDEILKIGKEDGVMP 227 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR + + I P +A + + + +IG+ +++++ Sbjct: 228 CGLGCRDTLRFEAALPLYGNEM-DDVITPLEAGLGYFVKLK-QEADFIGKAPLAKMKEAG 285 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254 + RK + + G+ + D EIG + K +A +D I Sbjct: 286 VPRKLIGLELTGKGIARHGAKVFKGDKEIGFVTTGYMSPTLGKTIANVIVDADQAEIGNE 345 Query: 255 MALTVHGVRVKASF 268 + + + +V A Sbjct: 346 VQVEIRNKKVPAVL 359 >gi|254173352|ref|ZP_04880025.1| glycine cleavage system T protein [Thermococcus sp. AM4] gi|214032761|gb|EEB73590.1| glycine cleavage system T protein [Thermococcus sp. AM4] Length = 398 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 97/334 (29%), Gaps = 80/334 (23%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAF 117 Query: 75 DSL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLS 103 + L I + + + K R + + I IN + Sbjct: 118 EKLEAWFNAIKRGIEKFGELDLEIENKTYDMAMFSVQGPKARDLAKDLFGI-DINDLWWF 176 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHN---------------------EKIASDIK 142 +E + R + + E+I + Sbjct: 177 QAKEVELDGIKMLLSRSGYTGENGWEVYFEDANPYHPNPEKRGKPEKALHVWERILEAGE 236 Query: 143 TY----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGC 184 Y LR+ G + + P A +D I K Sbjct: 237 KYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE- 293 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKA 238 +IG+E + + + R + RK +P G +L + IG + Sbjct: 294 FIGKEALLKQKERGLGRKLVHFKMVDKGIPREGYKVLANGEVIGEVTSGTLSPLLGIGIG 353 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + ++ + + + P +Y Sbjct: 354 IAFVKEEYAKPGVELEIEIRGKPKKAVTVTPPFY 387 >gi|186683888|ref|YP_001867084.1| glycine cleavage system aminomethyltransferase T [Nostoc punctiforme PCC 73102] gi|186466340|gb|ACC82141.1| glycine cleavage system T protein [Nostoc punctiforme PCC 73102] Length = 392 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 101/277 (36%), Gaps = 44/277 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64 S+ + GK+ I LQ+++ +D+ L A+ + +L Q I+ ++ EDT Sbjct: 73 SHMGKFTLQGKNLISQLQSLVPSDLSRLQPGQAQYTVLLNHQAGIIDDIIVYYQGEDTTG 132 Query: 65 ---FILEIDRSK----RDSLIDKLLFYKLR------SNVIIEIQPINGV----------- 100 + ++ + + ++ L K++ V+I +Q + Sbjct: 133 IQKAFIIVNAATSGKDKAWILQHLDLDKVQFQDLSPDKVLIAVQGTKAIKYLQPLVQEDL 192 Query: 101 ----VLSWNQEHTFSNSSFI-------DERFSIA-----DVLLHRTWGHNEKIASDIKTY 144 + +F+ ++ F + V L R+ + I + Sbjct: 193 QPIKAFGHLEATLLGKPAFLARTGYTGEDGFEVMVDLDVGVELWRSLHKSGVIPCGLGAR 252 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + D T P +A + L + TKG +IG+EV++ + + + R+ Sbjct: 253 DTLRLEAAMALYGQDI-DDTTTPLEAGLGWLVHLD-TKGDFIGREVLAEQKSKGVKRRLV 310 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + T ++ G +L+ +G + L Sbjct: 311 GLQTQGRNIARHGYQVLSTGKVVGEVSSGTLSPTLGY 347 >gi|330837169|ref|YP_004411810.1| aminomethyltransferase [Spirochaeta coccoides DSM 17374] gi|329749072|gb|AEC02428.1| aminomethyltransferase [Spirochaeta coccoides DSM 17374] Length = 361 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 98/308 (31%), Gaps = 52/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + + G A+ +Q I T D + R + + +G IL ++ K++ED + Sbjct: 51 SHMAEMTLEGPDALENIQRIFTNDFRNMKKGRVRYTLMCNEKGGILDDLVVCKMDEDRYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE------- 118 + ++ S R + + L +V +I ++ + + Sbjct: 111 MVLNASNRAKDAAWIQEH-LEGDVRFTDISDSTALIALQGPAAPAILARLAEPAVIPEKY 169 Query: 119 ---------------------------RFSIADVLLHRTW-------GHNEKIASDIKTY 144 F A R W + + + Sbjct: 170 YTLVEDGRVGDISCIISRTGYTGELGYEFFCAPADAQRLWELLLATGAPDGLVPCGLAAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + + P A + + + KG +IG+ + ++ +++ R Sbjct: 230 DTLRLEAAMPLYGHEM-DEDTTPFQAGLHF--AVKMDKGDFIGRNALDGMEAPDVV--RV 284 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260 + + + I + +IG KA+A+A ++K A + V Sbjct: 285 GLEVTSRGIVREHEDIYLGEKKIGHTTSGTMCPGIGKAVAMAYVEKEASAEGTELEADVR 344 Query: 261 GVRVKASF 268 G R+ Sbjct: 345 GRRIGVKV 352 >gi|33860834|ref|NP_892395.1| hypothetical protein PMM0276 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633776|emb|CAE18735.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 282 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 19/249 (7%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V GK + FL I T +++ L S L+P G IL L E + + Sbjct: 20 SVTGKDSKRFLNGITTGNIVDLN-NKVLKSCWLSPNG-ILKSLLEINCSEKELKVIVLVG 77 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 + S+ ++ + ++ Q+ NS I + + + + Sbjct: 78 NTSEIRKYFNDIIFPSD---DVSLSDSFSINRLQQVDDMNSWRITQPIFLKNEDKKYDFY 134 Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 N + + +IN I N++ P + + L I KGCY+GQE +S Sbjct: 135 KNNPNSMNTNDLQLWKINQAIPSLNSEI-NGKNNPLELGLTDL--IDFNKGCYLGQETMS 191 Query: 193 RIQHRNIIRK--RPMIITGTDDLPPSGSPILTD----DIEIGTLGVVV-----GKKALAI 241 +I++ + +++ R D S + IL + + +G + + K LA+ Sbjct: 192 KIKNVSSLKQEIRVWTAKDKDVNLESVNKILFNNQNKEKSVGYITSIYVLESRIIKGLAM 251 Query: 242 ARIDKVDHA 250 + +D Sbjct: 252 IKRKYLDKG 260 >gi|254281873|ref|ZP_04956841.1| aminomethyltransferase [gamma proteobacterium NOR51-B] gi|219678076|gb|EED34425.1| aminomethyltransferase [gamma proteobacterium NOR51-B] Length = 409 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 75/302 (24%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ A+ L ++T D+ L G+++ I +++++ ++L Sbjct: 79 VEGEDALAMLDRMVTRDLTKLRVNRITYCCWCDDTGRMIDDGTIFRLDDNRYMLTCGSPC 138 Query: 74 RDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111 + L L V I LS +FS Sbjct: 139 ----LAWLAKSALGFDKVTITEHTEQLAGLSLQGPTSFSTLKNMGVGDAVAELKPFGFTR 194 Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147 + + R L + W E + + L Sbjct: 195 VPFVGTELMISRTGFTGDLGYELWIDAEY---ALPLWDALYEAGEDYGIQPYGEAATNMA 251 Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 R+ G + P +F P + + L + K + G+ + + + Sbjct: 252 RLEAGFIMPYMEFNEAPKTINFEHDQTPLELNLGWL--VDFKKPHFNGRRALLEQKQKGT 309 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDI----EIGTLG------VVVGKKALAIARIDKVDH 249 K+ ++ + P+ IL D +IG + V ALA+ + Sbjct: 310 --KQLLVKLDIEGNKPAEEAILYDSKGCRNQIGYVTSAMWSPSVKANIALAMIDTKALTG 367 Query: 250 AI 251 I Sbjct: 368 EI 369 >gi|154706229|ref|YP_001423712.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii Dugway 5J108-111] gi|164685915|ref|ZP_01947229.2| glycine cleavage system T protein [Coxiella burnetii 'MSU Goat Q177'] gi|212217958|ref|YP_002304745.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii CbuK_Q154] gi|154355515|gb|ABS76977.1| aminomethyltransferase [Coxiella burnetii Dugway 5J108-111] gi|164601436|gb|EAX32156.2| glycine cleavage system T protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012220|gb|ACJ19600.1| aminomethyltransferase [Coxiella burnetii CbuK_Q154] Length = 383 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ + Sbjct: 70 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 129 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD I + V I +P ++ + + S DE Sbjct: 130 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 189 Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147 D+ + RT E A+D+ L Sbjct: 190 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 249 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ TD T P + + + +IG+ + + N+ + ++ Sbjct: 250 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 308 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + + + + G + A+A+AR+ V K + + Sbjct: 309 MEEPGVLRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 367 Query: 264 VKASFPH 270 VK P Sbjct: 368 VKIIKPP 374 >gi|226227905|ref|YP_002762011.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27] gi|226091096|dbj|BAH39541.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27] Length = 374 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 89/274 (32%), Gaps = 43/274 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G AI F+ ++ + DV L + S +L G I+ L+ + D + Sbjct: 62 SHMGEVIVRGPDAIRFVSSVTSNDVAALGIGQVQYSTLLRADGTIVDDLLVYRFA-DHLM 120 Query: 67 LEIDRSKRDSLIDKLLFY---------------KLRS---------NVIIEIQPINGVVL 102 L I+ S RD + L + L + + P++GV Sbjct: 121 LVINASNRDKDLAHLQAHLAGFDCTMEDISDATALLAVQGPQAPAIVAALADVPLDGVKY 180 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTW--------------GHNEKIASDIKTYHELR 148 W E + I R L + + LR Sbjct: 181 YWFTEGRVAGVPCIISRTGYTGELGFELYFDATHATAVWNAVMAAGAVTPCGLGARDTLR 240 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKRPMII 207 + G+ + I P +A ++ L + L K ++G++V+ R RK Sbjct: 241 LEAGLCLYGNEL-DDQITPLEAGLNWL--VKLGKAEPFLGKDVLVRQHQDGTDRKLVGFT 297 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 +P G P++ + G + L I Sbjct: 298 FEERAIPRHGYPVVYGGVAFGEVRSGTMSPTLGI 331 >gi|294674704|ref|YP_003575320.1| aminomethyltransferase [Prevotella ruminicola 23] gi|294472596|gb|ADE81985.1| aminomethyltransferase [Prevotella ruminicola 23] Length = 369 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 96/296 (32%), Gaps = 51/296 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++Q I T D+ P + G + L+ K+ E+ F Sbjct: 61 SHMGEVTVKGPDAERYVQHIFTNDIAGAPVGKIYYGMMCYENGGTVDDLLVYKMGENDFF 120 Query: 67 LEIDRSKRD---------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 L I+ + D L ++ FY I +Q + Sbjct: 121 LVINAANIDKDWAWMQQNAEGFDIDLQNRSDFYG-----QIAVQGPESEHIVETVLGLPC 175 Query: 112 NSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY-----HELR 148 +I DV++ RT E IA+ ++ LR Sbjct: 176 AELVFYTCKTIGDVIISRTGYTGEDGFEIYANHDYIRECWDKLIAAGVQACGLGCRDTLR 235 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + I P A + + + L K +IG+E +++ + +K I Sbjct: 236 FEVGLPLYGDEL-SEDITPIMAGLGMF--VKLDKTEFIGKEALAKQKAEGPAKKLVGIEL 292 Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 +P G + + IG + K++ +A ID + + + + Sbjct: 293 MDKAIPRHGYTVLNMAGEPIGEVTTGYHTLSTDKSVCMALIDAAYAKLDTEVQIQI 348 >gi|242242809|ref|ZP_04797254.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis W23144] gi|242233710|gb|EES36022.1| glycine cleavage system aminomethyltransferase T [Staphylococcus epidermidis W23144] Length = 363 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 106/312 (33%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ GK A F+Q I++ D L A SA+ +G ++ + K+ E+ ++ Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNEEGGVIDDLVTYKLNENHYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + + + + SN +++ G + + +D + Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPRSRALINELVDVDVNHM 170 Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146 + + + + Sbjct: 171 AMFEFKQNVQLFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLKYDVTPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D +I P++ GI+ +IG+ V+ + R Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIANDFIGKSVLKAQKENGSER 283 Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256 + + + +G +L ++ +IG + K++A+A ID+ + K + Sbjct: 284 RTVGLELLGKGIARTGYEVLDENSNQIGFVTSGTQSPSSGKSIALAIIDRGAFEMGKKVI 343 Query: 257 LTVHGVRVKASF 268 + + +V+A Sbjct: 344 VQIRKRQVEAKI 355 >gi|163849026|ref|YP_001637070.1| glycine cleavage system T protein [Chloroflexus aurantiacus J-10-fl] gi|222526989|ref|YP_002571460.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl] gi|163670315|gb|ABY36681.1| glycine cleavage system T protein [Chloroflexus aurantiacus J-10-fl] gi|222450868|gb|ACM55134.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl] Length = 367 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 100/312 (32%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FLQ ++T DV +P A + P G I+ + + D F+ Sbjct: 50 SHMGRFMVRGAHAEAFLQQMVTCDVRAIPLGHASYGLLCRPDGGIVDDVFLYHLP-DEFM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID--- 117 + ++ + R D L + V IE + +L+ +S+ D Sbjct: 109 VVVNAANRQKDWDWLQQHTAGFEVEIEDRSERWAMLALQGPQAEQLLAGAESSTTADIGS 168 Query: 118 -ERFSIA-------DVLLHRT--------------------------WGHNEKIASDIKT 143 +A + L+ RT G N A + Sbjct: 169 LPFHGVAMTTIFGQNALIARTGYTGEDGFEIFFEAVHAEQFWHGLLALGGNAVQACGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR + + T P++A + + + L KG +IG+E + I+ + R+ Sbjct: 229 RDSLRFEACLALYGHEI-DETTNPYEARLGWV--VKLDKGDFIGREALQAIKQNGVSRRL 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256 + +G P+ D +G + + +A D Sbjct: 286 VGFEMVGKGIARAGYPVHRPDGEPVGFVTSGMPSPTLGRPLGMAYVPTDLSSEG--SEFD 343 Query: 257 LTVHGVRVKASF 268 + V V+A Sbjct: 344 VIVRERPVRARV 355 >gi|161829873|ref|YP_001597538.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii RSA 331] gi|212211762|ref|YP_002302698.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii CbuG_Q212] gi|161761740|gb|ABX77382.1| glycine cleavage system T protein [Coxiella burnetii RSA 331] gi|212010172|gb|ACJ17553.1| aminomethyltransferase [Coxiella burnetii CbuG_Q212] Length = 383 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ + Sbjct: 70 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 129 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD I + V I +P ++ + + S DE Sbjct: 130 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 189 Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147 D+ + RT E A+D+ L Sbjct: 190 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 249 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ TD T P + + + +IG+ + + N+ + ++ Sbjct: 250 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 308 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + + + + G + A+A+AR+ V K + + Sbjct: 309 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 367 Query: 264 VKASFPH 270 VK P Sbjct: 368 VKIIKPP 374 >gi|165924198|ref|ZP_02220030.1| glycine cleavage system T protein [Coxiella burnetii RSA 334] gi|165916361|gb|EDR34965.1| glycine cleavage system T protein [Coxiella burnetii RSA 334] Length = 381 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ + Sbjct: 68 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 127 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD I + V I +P ++ + + S DE Sbjct: 128 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 187 Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147 D+ + RT E A+D+ L Sbjct: 188 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 247 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ TD T P + + + +IG+ + + N+ + ++ Sbjct: 248 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 306 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + + + + G + A+A+AR+ V K + + Sbjct: 307 MEEPGVLRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 365 Query: 264 VKASFPH 270 VK P Sbjct: 366 VKIIKPP 372 >gi|294055375|ref|YP_003549033.1| glycine cleavage system T protein [Coraliomargarita akajimensis DSM 45221] gi|293614708|gb|ADE54863.1| glycine cleavage system T protein [Coraliomargarita akajimensis DSM 45221] Length = 363 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 51/312 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FL ++ + + P A S + G ++ ++ +I ED F+ Sbjct: 52 SHMGEFHVTGSDAERFLDQLVVNRIASAPNGKAIYSPMCASDGGVVDDLIVYRIAEDDFL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS--------------------- 103 + ++ S + LL R V I + + +L+ Sbjct: 112 VCVNASNIEKDFGWLLKQAERWQLEVSITDRSADYALLALQGPKAETIMIDAGFTEASDL 171 Query: 104 ---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143 W+ E F+ R + + + + Sbjct: 172 KRFWHMETNFAGGQIRICRTGYTGEDGFEIYVSPQSAEALAKQLIQSGDAFGLKLCGLGA 231 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G+ + I P +A +D + L K +IG+ +S + + + R+ Sbjct: 232 RDSLRLEAGLPLYGHEL-SDEITPLEASLDWT--VKLQKEDFIGKAALSEQKAQGVPRRV 288 Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALT 258 + G+ ++ + +G + A + A ID + L Sbjct: 289 IHFKLDGRRIAREGTAVINEQGEPVGRVLSGTLSPASKSPIGSAIIDSKFLGSPLAVDLR 348 Query: 259 VHGVRVKASFPH 270 + + +K + P Sbjct: 349 GNQIALKIAQPP 360 >gi|323704578|ref|ZP_08116156.1| glycine cleavage system T protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536040|gb|EGB25813.1| glycine cleavage system T protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 369 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 85/284 (29%), Gaps = 51/284 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK + F+ ++T D+ + A S + G + L+ K + ++ Sbjct: 55 SHMGEIIVEGKDSEKFINYMVTNDITKITENQAMYSPMCYHNGTTVDDLLVYKFSYEKYM 114 Query: 67 LEIDRSKRDSLIDKL----LFYKLRSN--------------------VIIEIQPINGVVL 102 L ++ S D L + + I ++ + Sbjct: 115 LVVNASNIDKDYKWLWENKNGFDVEIKDESGEISELALQGPKSQEILEKITNYDLDSLKY 174 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIKTYH 145 + + R + NE +A + + Sbjct: 175 YHFDYMDLDGINCLVSRSGYTGEDGFEIFLKNEYVANMWEKILSVGENLGIKPAGLGARD 234 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR G+ + I P +A + + L K +IG+E + + + RK Sbjct: 235 TLRFEAGLPLYGNEL-SDDITPLEAGLGSF--VKLDKS-FIGKEALLNQKEEGLKRKIVG 290 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243 + +P G + + +IG + +A+ + Sbjct: 291 FEMADNAIPRHGYDVYAEGEKIGYVTTGYLSPTLKKNIGMALIK 334 >gi|83590777|ref|YP_430786.1| aminomethyltransferase [Moorella thermoacetica ATCC 39073] gi|123766727|sp|Q2RH46|GCST_MOOTA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|83573691|gb|ABC20243.1| aminomethyltransferase [Moorella thermoacetica ATCC 39073] Length = 366 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 83/283 (29%), Gaps = 50/283 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A+ +Q ++T D S + P G ++ L+ E ++ Sbjct: 52 SHMGEITIKGPDALALVQKLLTNDADRATGDRVIYSPMCYPDGGVVDDLLVYPRGEGEYL 111 Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDE----- 118 L ++ D + R V I + + +D Sbjct: 112 LVVNAGNIDKDFAWIQENASGFRVEVSNISAATAQLALQGPRALEILRPLTRVDLASLGY 171 Query: 119 -RFSIADVLLHRTW--------------------------------GHNEKIASDIKTYH 145 R++ VL + + + Sbjct: 172 YRWTEGQVLGVHCLISRTGYTGEDGFELYFEAAAAPTMWRNILAAGREAGLVPAGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + + P I P +A + + L KG + G+E ++ + + R+ Sbjct: 232 TLRLEAALPLYGHELGPD-ISPLEAGLHRF--VRLEKGEFNGREALAAQREAGVRRQLVG 288 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 + +P P+L EIG + ALA+ Sbjct: 289 LTMIDRGIPRPEYPVLAAGKEIGYVTSGSLAPTLGQNIALALV 331 >gi|215919234|ref|NP_820697.2| glycine cleavage system aminomethyltransferase T [Coxiella burnetii RSA 493] gi|206584118|gb|AAO91211.2| aminomethyltransferase [Coxiella burnetii RSA 493] Length = 391 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ + Sbjct: 78 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 137 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD I + V I +P ++ + + S DE Sbjct: 138 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 197 Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147 D+ + RT E A+D+ L Sbjct: 198 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 257 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ TD T P + + + +IG+ + + N+ + ++ Sbjct: 258 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 316 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + + + + G + A+A+AR+ V K + + Sbjct: 317 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 375 Query: 264 VKASFPH 270 VK P Sbjct: 376 VKIIKPP 382 >gi|150376992|ref|YP_001313588.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] gi|150031539|gb|ABR63655.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] Length = 825 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 91/281 (32%), Gaps = 51/281 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + V G+ A L I AD+ + + + +L +G + ++ D F+ Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADID-VEIGRSIYTGMLNARGGYESDLTVMRLAPDRFL 546 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE-----------HTFSNSS 114 + ++ D + + ++V + + VL+ SN+ Sbjct: 547 IVTGSAQAVHDADWIRRNIPVDAHVTLTDVTSSYAVLALMGPNARDILGRITSADLSNAG 606 Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145 F R + L +E + H Sbjct: 607 FPFSTICEIDIGYATAFANRMTYVGELGWELIVPSEFAVGVYEALHEAGRDLGLIDCGYY 666 Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201 LRI G + + P I P++A + +SL K G +IG+E + R + Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPYEAGLAF--AVSLDKPGGFIGREALVRARQAGPPV 723 Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALA 240 KR + T D P G IL D +G + L Sbjct: 724 KRIVQFTLDDAEPMLWGGELILRDGKPVGEVRSAAYGHTLG 764 >gi|70731985|ref|YP_261727.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5] gi|68346284|gb|AAY93890.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5] Length = 374 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 99/306 (32%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G +A L+ ++ D++ LP + R + QG IL +++ + ++ Sbjct: 55 SHMGQILLRGANAAQALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDEQLF 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------- 119 L ++ + +D + L + L I+ +L+ + + + Sbjct: 115 LVVNAACKDQDLAHLRRH-LGEQCDIQPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173 Query: 120 ------------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + A+ L E A + LR+ Sbjct: 174 QFKPVTLLGVDCFVSRSGYTGEDGFEISVPAAQAEKLARALLAEPEVAAIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL----NGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ + G + G EV+ Q + RKR Sbjct: 234 EAGLCLYGHDMNSDTTPIQASLLWAISKARRADGARAGGFPGAEVIFAQQQGGVSRKRVG 293 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ IG++ G A+ I+ A+ +A Sbjct: 294 LLPQERTPVREGAEIVDAQGKVIGSVCSGGFGPTLGGPLAMGYLDIEHC--ALDTPVAAI 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|319783026|ref|YP_004142502.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168914|gb|ADV12452.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 816 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 84/289 (29%), Gaps = 58/289 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + D+ + + +L +G I +S++ E F Sbjct: 491 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIVYTQMLNQRGGIESDLTVSRLSETAF 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVV--------------------- 101 L + + + L + ++ V+ ++ V+ Sbjct: 550 FLVVPGATLQRDLAWLRKHV--ADEFVVVTDVTAAESVLCLMGPDARKLIQKVSPNDFSN 607 Query: 102 ----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SD 140 QE R + L + ++ A Sbjct: 608 EKNPFGTYQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEVVEEAGVDVGLKLCG 667 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + T RI D +A + + KG +IG++ V R + + Sbjct: 668 LHTLDSCRIEKAFRHFGHDITDEDNV-LEAGLGF--AVKTAKGDFIGRDAVLRKKEAGLS 724 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 R+ + + L IL D +G + G L Sbjct: 725 RRLVQFRLKDPEPLLFHNEAILRDGKIVGPITSGNYGHHLGGAVGLGYV 773 >gi|91778442|ref|YP_553650.1| dehydrogenase [Burkholderia xenovorans LB400] gi|91691102|gb|ABE34300.1| Dehydrogenase [Burkholderia xenovorans LB400] Length = 831 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 51/274 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69 V G+ A LQ I+ DV +P + +L +G F ++++ +D ++L Sbjct: 509 VKGRDAQSVLQGIVANDVD-VPAGTTVYTGMLNERGGYESDFTLTRLTDDQYLLVTGSAQ 567 Query: 70 ---DRSKRDSLI---DKLLF------YKL------RSN-----VIIEIQPINGVVLSWNQ 106 D + I Y + RS V ++ Sbjct: 568 TTRDFDAIERAIPHDKHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149 E ++ R + L + E +T H LRI Sbjct: 628 EVDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + P T P +A + + + G++ + +++ + +R+R +++T Sbjct: 688 EKGYRAWGRELTPDT-NPFEAGLSFACKLD-KDIAFRGRDALLKLRAQ-PLRRRMVVLTA 744 Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240 G IL D +G + L Sbjct: 745 DGAAQRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778 >gi|330890521|gb|EGH23182.1| glycine cleavage system T protein [Pseudomonas syringae pv. mori str. 301020] Length = 336 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 89/266 (33%), Gaps = 43/266 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 72 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLM 131 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L + IE +L+ + + + + Sbjct: 132 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 190 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 191 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 250 Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +TD P A+ + G + G E V Q + +KR Sbjct: 251 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 310 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTL 230 ++ G+ I+ + IGT+ Sbjct: 311 LLPEERTPVREGTEIVDEQGAVIGTV 336 >gi|145595831|ref|YP_001160128.1| glycine cleavage system aminomethyltransferase T [Salinispora tropica CNB-440] gi|145305168|gb|ABP55750.1| glycine cleavage system T protein [Salinispora tropica CNB-440] Length = 387 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 51/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ ++V G A F+ A ++ D+ + A+ + G ++ + D Sbjct: 76 SHLGKVRVTGMGAADFVNACLSNDLARIEPGRAQYTLCCDDAAGGVVDDIIAYLYAYDHV 135 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106 L + + ++ +L S + I + VL+ Sbjct: 136 FLIPNAANTAEVVRRLQA-AAPSPITITDEHEAYAVLAVQGPRSADLLGALGLPTEHDYM 194 Query: 107 ---EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTYHELR 148 E T + + R L + + A + LR Sbjct: 195 SFAEGTLAGADLTVCRTGYTGELGYELILPAADAGGVWDALFAADEQLQACGLAARDTLR 254 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G D I P A + K + G+ + + R+ ++ Sbjct: 255 TEMGYPLHGQDLSRE-ITPVQARSGW--AVGWDKPAFWGRAALVAEKSAGPRRRLRGLVA 311 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH---- 260 +P G + + +GT+ K+ +A+A ID + A+ +G+ L V Sbjct: 312 VDRAIPRPGMVVYHGETPVGTVTSGTFSPTRKQGIALALID-TEPALAEGVDLEVDIRGR 370 Query: 261 GVRVKASFPH 270 V+ P Sbjct: 371 RATVRLVRPP 380 >gi|288802493|ref|ZP_06407932.1| glycine cleavage system T protein [Prevotella melaninogenica D18] gi|288335021|gb|EFC73457.1| glycine cleavage system T protein [Prevotella melaninogenica D18] Length = 361 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 85/263 (32%), Gaps = 40/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A F+ I T DV L I P G ++ I K+++ ++ Sbjct: 51 SHMGEVIVSGPEADKFINHIFTNDVNGLAAGKVLYGMICYPDGGVVDDTCICKLDDHLYL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111 + I+ S D I + +VIIE + L+ S Sbjct: 111 MTINASNIDKDIAWIEQNAEGFDVIIENKSEAYGQLAIQGPKAESMLEDVLGLACKELKF 170 Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKI-------------ASDIKTYHELRI 149 + I R +G E I + LR Sbjct: 171 YEVKRLQQDGTEVIVSRTGYTGEDGFEVYGTPEYIVKIWDKLIEAGVKPCGLGCRDTLRF 230 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + I P A + + + K +IG+E + + + + ++ I Sbjct: 231 EVGMPLYGNEL-SDKITPVMAGLSMF--VKFDKEEFIGKEALLKQKAEGVSQRLRGIELD 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232 + +P G +L D +E+G + Sbjct: 288 DNAIPRHGYKVLKDGVEVGEVTT 310 >gi|148655664|ref|YP_001275869.1| glycine cleavage system T protein [Roseiflexus sp. RS-1] gi|148567774|gb|ABQ89919.1| glycine cleavage system T protein [Roseiflexus sp. RS-1] Length = 371 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 94/277 (33%), Gaps = 64/277 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A+PFLQ ++T DV +P A + + P G I+ I + D ++ Sbjct: 55 SHMGEVEVRGPDALPFLQYLVTYDVAAIPPGRANYALMCRPDGGIIDDTFIYNLG-DYYL 113 Query: 67 LEIDRS-----------------------------------KRDSLIDKLLFYKLRSNVI 91 + ++ + ++L+ ++ ++ Sbjct: 114 IVVNAANTAKDVAWMHECAKGFNVTVSDVSDQTGMLALQGPLAEALLAQV------ADAD 167 Query: 92 IEIQPINGVV-------------LSWNQEHTFSNSSFIDERFSIADVLL--HRTWGHNEK 136 + P +GV+ + E F + + D LL RT G Sbjct: 168 LAALPFHGVMQGRVVHTPAIVARTGYTGEDGFEIFVAAGDVTRVWDELLDAGRTIGLKP- 226 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LR + + P++A + + + L KG +IG+E + RI+ Sbjct: 227 --CGLGARDSLRFEACLALYGHEIT-EETNPYEARLGWV--VKLDKGDFIGREALQRIKQ 281 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232 + R+ + S I + IG + Sbjct: 282 EGVARRLTGFEMAGRGIARSEYEIRDLEGAPIGRVTS 318 >gi|33239760|ref|NP_874702.1| aminomethyltransferase related to glycine cleavage protein T [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237285|gb|AAP99354.1| Aminomethyltransferase related to glycine cleavage protein T [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 280 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 42/252 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G FLQ TAD+L + + L+P G++ I ++ +T + Sbjct: 18 LEGADNKKFLQGQTTADILGVRDGGLLRTCWLSPVGRLKALLEI-RLVGETISFIVLGGN 76 Query: 74 RDSLIDKLLFYKLRS-NVIIEIQPI---------NGVVLSWNQEHTFSNSSFID--ERFS 121 D +ID + V I N E ++ + E+ Sbjct: 77 IDEVIDGFDKVIFPADKVNIRASKEIRRLQKINYNESWKVTPVEWLLPSAELPNDFEKLK 136 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 A + + W + + Y I P + + L I Sbjct: 137 PASKEMTQEWSLIQGLP-----YDLFEI------------DGNSNPLELGLSDL--IDFD 177 Query: 182 KGCYIGQEVVSRIQHRNIIRKRPM-----IITGTDDLPPSGSPILTDDIEIGTLGV---- 232 KGCY+GQE +++I++ ++ + I D S + + +G + Sbjct: 178 KGCYLGQETLAKIKNIGRLKCQLRYFKSQRILRKGDSLNISSIDINEKQNVGIVVASKTF 237 Query: 233 -VVGKKALAIAR 243 LA+ + Sbjct: 238 GSSSSIGLALIK 249 >gi|291334249|gb|ADD93913.1| glycine cleavage T protein aminomethyl transferase [uncultured marine bacterium MedDCM-OCT-S08-C1622] Length = 393 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 80/271 (29%), Gaps = 56/271 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G + +L ++T DV L + G+++ I ++ E + L Sbjct: 65 RFTGPDSCAYLNRLVTRDVSKLAINRVAYTVWCDDNGQVMDDGTIFRLGESDYRLCAYAR 124 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------------ 108 D L+ + +V I + L+ Sbjct: 125 CLDWLMWSAEGF----DVTIVDETAEVAALAVQGPTSCAVFKDMGFEGIENLKPFGMTYY 180 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTYHELRINH 151 F +S + R L + W + A+ LR Sbjct: 181 PFESSQVMISRTGFTGDLGYEVWIEPDLAEAFWDAMFEAGKLRGIRAAGSAALDMLRTET 240 Query: 152 GIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G + DF+P+ P + + L +S K + G++ + + + R Sbjct: 241 GFLQAGVDFIPAEEAIRTGRSRSPFELGLGWL--VSFDKPVFNGRKALLKEKKEGS-RYA 297 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + + + P + I + + E+GT+ Sbjct: 298 FVYLDVEGNKPAESAFIYSGNKEVGTVTTAA 328 >gi|330502286|ref|YP_004379155.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01] gi|328916572|gb|AEB57403.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01] Length = 374 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 89/268 (33%), Gaps = 43/268 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G++A L+ ++ D++ LP R + QG IL +++ + +DT Sbjct: 55 SHMGQVLLRGENAARALETLVPVDIIDLPLGTQRYAMFTDAQGGILDDLMVANLGDDTLY 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + +D + L + + IE +L+ + + S Sbjct: 115 LVVNAACKDQDLAHLQKH-IGEQCQIESLFEERALLALQGPKAAEVLARLAPEVSKMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L E A + LR+ Sbjct: 174 QVARVRLLGSECIVSRSGYTGEDGFEISVAVDQAEALARSLLAEAEVEAIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +T +L+ ++ + G + G E V Q + + RKR Sbjct: 234 EAGLCLYGHDMSSATTPIEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVG 293 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ G+ I+ D IG + Sbjct: 294 LLPQERVPVREGAEIVDADGTVIGQVSS 321 >gi|319892522|ref|YP_004149397.1| Aminomethyltransferase / glycine cleavage system T protein [Staphylococcus pseudintermedius HKU10-03] gi|317162218|gb|ADV05761.1| Aminomethyltransferase / glycine cleavage system T protein [Staphylococcus pseudintermedius HKU10-03] Length = 363 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 94/295 (31%), Gaps = 55/295 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A +Q +++ D L A+ +A+ +G ++ +I ++ E ++ Sbjct: 53 SHMGEIRIEGPEAAHLVQYVLSNDTNQLTLSKAQYTALCNEEGGVIDDLVIYQLGETQYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + D D ++ + R + + + G + + E S + Sbjct: 113 LVVNAANVDKDYDWIVQHSSRFDATVTNVSDQYGQLALQGPNARRIIQDNVSEDVSEMGM 172 Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148 + + + LR Sbjct: 173 FEFKQNVKIFGKNVILSQSGYTGEDGFEIYCDSEDVTTIWDALLSKDVTPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIEEDFIGKSVLQSQKENGAPRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKK 253 + +P +G I D EIG + A+ + I + + K Sbjct: 286 VGLRMIDKGIPRTGYTIYDLDGNEIGEVTSGTQSPSTGHAIGMGIIARDAFEMGK 340 >gi|34921597|sp|Q83B06|GCST_COXBU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 363 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ + Sbjct: 50 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD I + V I +P ++ + + S DE Sbjct: 110 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 169 Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147 D+ + RT E A+D+ L Sbjct: 170 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ TD T P + + + +IG+ + + N+ + ++ Sbjct: 230 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 288 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263 + + + + G + A+A+AR+ V K + + Sbjct: 289 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 347 Query: 264 VKASFPH 270 VK P Sbjct: 348 VKIIKPP 354 >gi|220933176|ref|YP_002510084.1| glycine cleavage system T protein [Halothermothrix orenii H 168] gi|254797875|sp|B8D1D7|GCST_HALOH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|219994486|gb|ACL71089.1| glycine cleavage system T protein [Halothermothrix orenii H 168] Length = 357 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 93/301 (30%), Gaps = 57/301 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ LQ I+T +V L + + G I+ L+ + +D ++ Sbjct: 49 SHMGEILVEGPGALESLQKIVTNNVARLKKGQVLYTPMCKDDGGIIDDLLVYCLGQDKYL 108 Query: 67 LEIDRS--------------KRDSLIDKLLFYKLRS-----------NVIIEIQPINGVV 101 + ++ S +R ++++ Y L + V Sbjct: 109 MVVNASNIEKDFNWVRDNSNQRTEVVNESDNYALLALQGPNSKKILEKVSSVNLDSLKFY 168 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTY 144 T + + R L + + +K I + + Sbjct: 169 NFTTG--TLKGAEVLISRTGYTGELGYELYLSPDKAVEVWQALMEAGSDLGLIPAGLGAR 226 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D P +A + + K +IG+ + + + + RK Sbjct: 227 DTLRLEKGYCLYGNDI-DENTHPLEAGLGWT--VKFDKASFIGKRALLKYKEEGLSRKLV 283 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 +P G PI + +IG + + R DK G ++T Sbjct: 284 GFKLKGRGIPRHGYPIKDNGDQIGVVTSGSMSPTLSEGIGMGYVRYDKA----TPGESIT 339 Query: 259 V 259 + Sbjct: 340 I 340 >gi|150389164|ref|YP_001319213.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus metalliredigens QYMF] gi|166989722|sp|A6TMY6|GCST_ALKMQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|149949026|gb|ABR47554.1| glycine cleavage system T protein [Alkaliphilus metalliredigens QYMF] Length = 369 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 100/313 (31%), Gaps = 58/313 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK A+ F+Q +IT D + S + G ++ L+ K EED F Sbjct: 52 SHMGEVEIKGKDALNFVQYLITNDASQMEKNQIIYSFMCYENGGVVDDLLVYKFEEDYFY 111 Query: 67 LEIDRS-------------------------------------------KRDSLIDKLLF 83 L I+ ++ + +L F Sbjct: 112 LVINAGNIEKDYEWMLKQSTAYDVEVNNISNDVSELALQGPKAEKILQKLTETDLSQLQF 171 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIK 142 + L+ +V I+ +N ++ +++ ++ G + + + Sbjct: 172 FYLQRDVTID--GVNCLISRTGYTGEDGFEIYVNPSDAVQLWEKLLEVGQEDGLKPIGLG 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201 LR + + I P +A + L K ++G++ + + + R Sbjct: 230 ARDTLRFEAALPLYGHEI-NRDITPLEAGFGF--AVKLKKEVDFLGKKALIEQKEAGLTR 286 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 K +P S + +IG + LA+ ID + + Sbjct: 287 KLVGFEMKDRGIPRSDYEVYHQGEKIGFVTTGYFSPTLKRNIGLAL--IDAKYAELGNEV 344 Query: 256 ALTVHGVRVKASF 268 + + +VKA Sbjct: 345 DILIRKKQVKAEL 357 >gi|16800453|ref|NP_470721.1| glycine cleavage system aminomethyltransferase T [Listeria innocua Clip11262] gi|24636862|sp|Q92C06|GCST_LISIN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|16413858|emb|CAC96616.1| lin1385 [Listeria innocua Clip11262] Length = 362 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRS--------------------KRDSLIDKLLFY-----KLRSNVIIEIQPINGVV 101 L ++ + S +L K+ S + + + Sbjct: 112 LVVNAANTEKDYEWMVQNIVGDVTVKNASSEFGQLALQGPNAEKILSKLT-DADLSSISF 170 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148 + ++ + I R + + + LR Sbjct: 171 FGFIEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + + + I P +A ++ + L K +IG++ + + + + RK I Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKQALIKQKEAGLTRKLVGIE 287 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 +P P+ +D EIG + LA+ ID + + + + + Sbjct: 288 LIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIGLAL--IDTAYTELDQELEVGIRN 345 Query: 262 VRVKASF 268 +VKA Sbjct: 346 KKVKAKV 352 >gi|302346458|ref|YP_003814756.1| aminomethyltransferase [Prevotella melaninogenica ATCC 25845] gi|302150470|gb|ADK96731.1| aminomethyltransferase [Prevotella melaninogenica ATCC 25845] Length = 361 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 86/269 (31%), Gaps = 52/269 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A F+ I T DV L I P G ++ I K+++ ++ Sbjct: 51 SHMGEVIVSGPEADKFINHIFTNDVNGLAAGKVLYGMICYPDGGVVDDTCICKLDDHLYL 110 Query: 67 LEIDRS-----------------------------------KRDSLI--------DKLLF 83 + I+ S K +S++ +L F Sbjct: 111 MTINASNIDKDVAWIEQNAEGFDVIIENKSEAYGQLAIQGPKAESMLEDVLGLACKELKF 170 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y+++ ++ +V + + + + + Sbjct: 171 YEVKR---LQQDGTEVIVSRTGYTGEDGFEVYGTPEYIVK---IWDKLIEAGVKPCGLGC 224 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G+ + I P A + + + K +IG+E + + + + ++ Sbjct: 225 RDTLRFEVGMPLYGNEL-SDKITPVMAGLSMF--VKFDKEEFIGKEALLKQKTEGVSQRL 281 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232 I + +P G +L D +E+G + Sbjct: 282 RGIELDDNAIPRHGYKVLKDGVEVGEVTT 310 >gi|323464376|gb|ADX76529.1| glycine cleavage system T protein [Staphylococcus pseudintermedius ED99] Length = 363 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 94/295 (31%), Gaps = 55/295 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A +Q +++ D L A+ +A+ +G ++ +I ++ E ++ Sbjct: 53 SHMGEIRIEGPEAAHLVQYVLSNDTNQLTLSKAQYTALCNEEGGVIDDLVIYQLGETQYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + D D ++ + R + + + G + + E S + Sbjct: 113 LVVNAANVDKDYDWIVQHSSRFDATVTNVSDQYGQLALQGPNARRIIQDNVSEDVSEMGM 172 Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148 + + + LR Sbjct: 173 FEFKQNVKIFGKNVILSQSGYTGEDGFEIYCDSEDVTTIWDALLSKDVTPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + R+ Sbjct: 233 LEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIEEDFIGKSVLQSQKENGAPRRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKK 253 + +P +G I D EIG + A+ + I + + K Sbjct: 286 VGLRMIDKGIPRTGYTIYDLDGNEIGEVTSGTQSPSTGHAIGMGIIVRDAFEMGK 340 >gi|282877755|ref|ZP_06286568.1| aminomethyltransferase [Prevotella buccalis ATCC 35310] gi|281300071|gb|EFA92427.1| aminomethyltransferase [Prevotella buccalis ATCC 35310] Length = 364 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 59/274 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A ++ I T DV P +L P G + L+ K+ E+ F L + + Sbjct: 58 ITGADAERYVNHIFTNDVAGAPINQVFYGMMLYPDGGTVDDLLVYKMGENEFFLVFNAAN 117 Query: 74 RDSLIDKLLFYKLRS-----NVIIE-IQPINGVVLSWNQEHTF----------------- 110 D + +R +V I+ G + E Sbjct: 118 IDKDVAW-----MRENAEGFDVTIDHCSDYYGQLAVQGPEAEAVMKEVLHLDCKDLQFYT 172 Query: 111 ------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------L 147 + I R +G + I I T+ L Sbjct: 173 AKTVDVDGENVIISRTGYTGEDGFEIYGSHAYI---INTWDALMASKRCVPCGLGCRDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G+ + + I P A + + L K +IG+E + + + + ++ + Sbjct: 230 RFEVGLPLYGNEL-SAEISPVMAGLSMFC--KLDKEEFIGKEAIVKQKEEGVKQRVIGLE 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 +P G +L D ++G + G A+++ Sbjct: 287 LQEKAIPRHGYAVLRDGKQVGVITT--GYHAISV 318 >gi|76803017|ref|YP_331112.1| glycine cleavage system aminomethyltransferase T [Natronomonas pharaonis DSM 2160] gi|121698044|sp|Q3IN28|GCST_NATPD RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|76558882|emb|CAI50478.1| aminomethyltransferase, glycin cleavage system T protein [Natronomonas pharaonis DSM 2160] Length = 358 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 97/291 (33%), Gaps = 49/291 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A + T DV +L A + I G +L ++ ++ + Sbjct: 51 SHMGEIEVSGPDAAALTNRLTTNDVASLAPGEATYAGITDDDGVLLDDTVVYRLPDGATY 110 Query: 67 LEIDRSKRDSLI-DKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFID------ 117 L + + D L+ ++ + R + ++ + +++ S +D Sbjct: 111 LFVPNAGNDELMAERWRSFADRWDLAATVDNATDDYAMVALQGPDALELLSSLDVDVFDL 170 Query: 118 ERFSIA-------DVLLHRTWGHNE-------KIASDIKTY-------------HELRIN 150 RF A D L+ RT E + A+ + LR+ Sbjct: 171 SRFEAAERTVAGVDCLVSRTGYTGEDGVELLFETAAAETVWSALDCQPCGLGARDTLRLE 230 Query: 151 HGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 G + +F P T P++A + G ++ G ++G + ++ + + + Sbjct: 231 AGFLLGGNEFDPETNPRTPYEANI----GFAVDLGTEFVGSDALAAQREAGPDERLVGLR 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 + G I+ +G + AL ++ + + Sbjct: 287 LQDRGIARHGHDIVAAGDVVGEVTSGTMSPTLGAAIALGYVPVEYTEPGTE 337 >gi|315125640|ref|YP_004067643.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas sp. SM9913] gi|315014153|gb|ADT67491.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas sp. SM9913] Length = 360 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 99/290 (34%), Gaps = 47/290 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ A FL+ ++ DV L A + +L QG ++ +I E + Sbjct: 50 SHMTIVDIQGEQAQAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYYFSETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + R+ + L K+ S+ V + +P ++ + ++ A Sbjct: 110 RLVVNSATREKDLAHLA--KVSSDFAVTVTERPEFAMIAVQGPNARAKTAQVLNADQQAA 167 Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147 L + + + L Sbjct: 168 VEGMKPFFGVQAGDLFIATTGYTGEDGYEIVVPNEQAADLWQQLLDAGVAPAGLGARDTL 227 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D ++ P A M +IG++V+ + + K+ +I Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTHKQVGLI 286 Query: 208 TGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKK 253 + SGS ++ D E GT +G ++A+AR+ + + Sbjct: 287 LEEKGVLRSGSKVIVDGGEGVITSGTFSPTLG-YSVALARVPRSTGDTAQ 335 >gi|330962176|gb|EGH62436.1| glycine cleavage system T protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 374 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + Sbjct: 55 SHMGQIRLGGAGAAKALETLVPVDIIDLPVGMQRYAMFTNESGGILDDLMVANLGNGQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L + L IE +L+ + + + + Sbjct: 115 LVVNAACKEQDLAHLRQH-LAGQCTIEPLFEERALLALQGPQAVTVLARLAPEVASMTFM 173 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 174 QFASVTLLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T +L+ ++ + G + G E V Q + +KR Sbjct: 234 EAGLCLYGHDMDTETSPIQASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVNKKRVG 293 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ I+ + D IGT+ G LA+ ++ A+ + Sbjct: 294 LLPQERTPVREGTQIVDEQDSVIGTVCS--GGFGPSLGGPLAMGYLESQYTALDTPVWAM 351 Query: 259 VHGVRV 264 V G +V Sbjct: 352 VRGKKV 357 >gi|170723393|ref|YP_001751081.1| glycine cleavage system T protein [Pseudomonas putida W619] gi|169761396|gb|ACA74712.1| glycine cleavage system T protein [Pseudomonas putida W619] Length = 373 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 51/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + GK+A L++++ D++ LP + R + QG IL +++ + +DT Sbjct: 54 SHMGQIILRGKNAAQALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + ++ + L + ++ +Q V + + +F+ Sbjct: 114 LVVNAACKEQDLAHLQQHIGDRCQIQPLFEERALLALQGPAAVTVLARLAPEVAGMTFMQ 173 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R A+ L R E + LR+ Sbjct: 174 LRPVSLLGEDCFVSRSGYTGEDGYEISVPAKAAEALARRLLAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D +T P +A + + G + G +VV Q + RKR Sbjct: 234 AGLCLYGHDMDTATT-PVEASLLWAVSKVRRADGARAGGFPGADVVFAQQQAGVARKRVG 292 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ I+ D +G + A+ I+ A+ + Sbjct: 293 LLPQERTPVREGAEIVDASDKPVGKVSSGGFGPTLGAPVAMGYVEIEH--GALDTSLFAL 350 Query: 259 VHGVRVKASF 268 V G +V Sbjct: 351 VRGKKVALKV 360 >gi|322372078|ref|ZP_08046620.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haladaptatus paucihalophilus DX253] gi|320548500|gb|EFW90172.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haladaptatus paucihalophilus DX253] Length = 836 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 100/301 (33%), Gaps = 59/301 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 L++ + I+V G + FLQ +++ D+ + R + +L G IL +S+++E Sbjct: 511 LYDLTSFTAIEVRGSGSERFLQGLLSNDID-VSPGRVRYTTMLNEDGGILADLTVSRLDE 569 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------INGVVLSW 104 D F++ + + + + +E+ + G+V + Sbjct: 570 DRFLILTGGGSSGTTQGRWIRDHAPDDGTVEVIDRTSARCGLGVWGPNARKTLEGLVETD 629 Query: 105 NQEHTFSNSSFIDE----------RFSIADVLLHRTWGHNE-----------------KI 137 F S + R S L + E + Sbjct: 630 ISHDAFPFFSCQETYVGGVPVTMLRVSFVGELGWELYAPQEYGAQLWDAVWDAGEEHGVL 689 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 A T + + + G TD P P++A + + +IG+E ++ + Sbjct: 690 AMGDATLNSMSMEKGFRLWGTDISPE-YNPYEANLSFAVDMETD---FIGKEALAEAKES 745 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDH 249 I +R + +T + + +G PI+ D +G + A A D D Sbjct: 746 G-IERRLVPVTLDEPGAVVDTGHPIVDGDEILGYTTRADYGYTIDAGIAYAYLPTDYTDA 804 Query: 250 A 250 Sbjct: 805 G 805 >gi|14590974|ref|NP_143049.1| glycine cleavage system aminomethyltransferase T [Pyrococcus horikoshii OT3] gi|56554253|pdb|1V5V|A Chain A, Crystal Structure Of A Component Of Glycine Cleavage System: T-Protein From Pyrococcus Horikoshii Ot3 At 1.5 A Resolution gi|56554254|pdb|1V5V|B Chain B, Crystal Structure Of A Component Of Glycine Cleavage System: T-Protein From Pyrococcus Horikoshii Ot3 At 1.5 A Resolution gi|3257563|dbj|BAA30246.1| 401aa long hypothetical aminomethyltransferase [Pyrococcus horikoshii OT3] Length = 401 Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ + T D+ P + +L +G I L+ + + ++ Sbjct: 53 SHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 112 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117 + D + L F KL + ++ I + + + F ID Sbjct: 113 MICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAKDLFGID 172 Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145 R+ D + + E D YH Sbjct: 173 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 232 Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177 LR+ G + + P A ++ Sbjct: 233 RILEEGKKYGIKPCGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 290 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234 I K +IG++ + + + R + RK +P G + + IG + Sbjct: 291 IYWDKD-FIGKDALLKQKERGVGRKLVHFKMIDKGIPREGYKVYANGEMIGEVTSGTLSP 349 Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + I+ + + + P +Y Sbjct: 350 LLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFY 390 >gi|291301092|ref|YP_003512370.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM 44728] gi|290570312|gb|ADD43277.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM 44728] Length = 410 Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 45/306 (14%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS++ + + G L +T DV L + + G ++ ++ + + D+ Sbjct: 24 LSHKGKLVISGSDPAHVLNRCLTNDVHHLTSPGKTQYTLACDDDGGVIADGMLYRFDRDS 83 Query: 65 F--------ILEIDRSKRDSLIDKLLFYKLR------------SNVIIEIQPING--VVL 102 F L+ + + D++ + + V + + + Sbjct: 84 FMMFPSGAGWLDFAKRLDAEVGDEITIGVIHDSHGILSLQGPEAAVTLRRLGLAAPQEYM 143 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRI 149 ++ +SFI R A N IA+ ++ LR+ Sbjct: 144 FFDISQAEWGNSFI-CRTDFAGQPGFDIIATNPVIAAMWDELLDAGVTPCGLRARDSLRL 202 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G TDF + +A + I K + G+E + + R+ + Sbjct: 203 EAGNALHGTDF-NEHVTAIEARLAW--AIGWNKRQFWGKEALEAQRTTGTQRRIFGLTAT 259 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA-IKKGMALTVHGVRV 264 + +G+ I ++GT+ K +A+A + + A + + T V Sbjct: 260 SPATLETGATIYDGQQQVGTITSACHSPTLNKPIALALFEPIYQAGTELQVDTTTGRVAA 319 Query: 265 KASFPH 270 + P Sbjct: 320 TVTKPP 325 >gi|59802611|sp|O58888|GCST_PYRHO RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 398 Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ + T D+ P + +L +G I L+ + + ++ Sbjct: 50 SHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 109 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117 + D + L F KL + ++ I + + + F ID Sbjct: 110 MICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAKDLFGID 169 Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145 R+ D + + E D YH Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 229 Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177 LR+ G + + P A ++ Sbjct: 230 RILEEGKKYGIKPCGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234 I K +IG++ + + + R + RK +P G + + IG + Sbjct: 288 IYWDKD-FIGKDALLKQKERGVGRKLVHFKMIDKGIPREGYKVYANGEMIGEVTSGTLSP 346 Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + I+ + + + P +Y Sbjct: 347 LLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFY 387 >gi|260459623|ref|ZP_05807877.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259034425|gb|EEW35682.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 819 Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 82/287 (28%), Gaps = 54/287 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + D+ + + +L +G I +S++ + + Sbjct: 494 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIVYTQMLNKRGGIESDLTVSRLSDTAY 552 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV----------------------- 101 L + + + L + V+I ++ V+ Sbjct: 553 FLVVPGATLQRDLAWLRRHVGEEFVVITDVTAAESVLCLMGPNARKLIQNVSPNDFSNEN 612 Query: 102 --LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142 QE R + L + ++ A + Sbjct: 613 NPFGTFQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEAIEEAGTDVGLKLCGLH 672 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T RI D +A + + KG +IG++ V R + + R+ Sbjct: 673 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTAKGDFIGRDAVLRKKEAGLSRR 729 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 + L IL D +G + G L Sbjct: 730 LVQFRLKDPQPLLFHNEAILRDGKIVGPITSGNYGHHLGGAIGLGYV 776 >gi|91070613|gb|ABE11512.1| conserved hypothetical protein [uncultured Prochlorococcus marinus clone HOT0M-8G12] Length = 278 Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 36/257 (14%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70 + GK A FL I T+++L + LTP G + L+ + + + ILE + Sbjct: 17 SITGKDARKFLNGITTSNILD-SENKVIKTCWLTPNGVLRSLIEIIFLERNLEVIILEGN 75 Query: 71 RSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 ++ + +K++F +V + IQ I+ + F + D+ F I Sbjct: 76 TNEIINYFNKIIFPV--DDVFLSEPFLINRIQEIDEFSSWRTNQPIFFKTE--DKEFEIY 131 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 L+ I +D+K + +IN I + P + + L I KG Sbjct: 132 KNKLNLL------IPNDLKLW---KINQAIPSLGMEI-NGKNNPLELGLQDL--IDFNKG 179 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL------TDDIEIGTLGV----V 233 CY+GQE +S+I++ + +++ D DI +G + Sbjct: 180 CYLGQETMSKIKNVSSLKQEIRTWKSLDSNLNLDVEDKNLYINSAKDISVGKITSFFKLD 239 Query: 234 VGKKALAIARIDKVDHA 250 K LA+ + ++ Sbjct: 240 SQIKGLAMIKRKYLEEG 256 >gi|330829177|ref|YP_004392129.1| glycine cleavage system aminomethyltransferase T [Aeromonas veronii B565] gi|328804313|gb|AEB49512.1| glycine cleavage system aminomethyltransferase T [Aeromonas veronii B565] Length = 365 Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 104/309 (33%), Gaps = 47/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FLQ ++ DV L A S +L P+G ++ + + + + Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTAPGKALYSGMLNPEGGVIDDLITYYLGDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERFSIA 123 L ++ + R+ + + + + ++ + +P ++ ++ + +R ++ Sbjct: 110 RLVVNSATREKDLAWIRHHAIDFDITVTERPELAMIAVQGPNAKVKAAAVLSAAQRTAVV 169 Query: 124 DVL----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + N + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACELWQALLDNGVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D +I P A M + +IG++V+ + K ++ Sbjct: 230 EAGMNLYGQDM-DESISPLAANMAWTIAWEPSDRNFIGRDVLEAQKAAGNQPKLVGLVME 288 Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + +G P+ + G + ++A+AR+ + + + + Sbjct: 289 EKGVLRAGMPVTFTAANGEKREGVITSGSFSPTLGYSIALARVPRDIGEL-AEVEIRKKL 347 Query: 262 VRVKASFPH 270 V VK + P Sbjct: 348 VTVKVTKPA 356 >gi|269218168|ref|ZP_06162022.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str. F0332] gi|269212296|gb|EEZ78636.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str. F0332] Length = 531 Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GIS 179 + L + + + R+ + + PH+ +D L + Sbjct: 317 ADKGGKLLAALERAGAAPAGMLAWEAARVAGWRPRVAFE-VDERALPHE--LDWLRTAVH 373 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-- 234 L KGCY GQE V+++ + +R + + D+LP +G P+ + ++G + V Sbjct: 374 LNKGCYRGQETVAKLVNLGRPPRRLVELFLEGPVDELPRTGDPVTSGGRKVGVVASAVRH 433 Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVH 260 G ALA+ R A+ L V Sbjct: 434 PEDGPVALALVR-----RALDPEAVLDVG 457 Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 1/114 (0%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G +L ++++ + + + + + +P G I + + D L D Sbjct: 109 VVAVRGADRRRWLHSLLSQALADIAPGASTEALLFSPSGHIENGAFVY-DDGDVAWLLCD 167 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 R D L V + ++ + ++ + + A Sbjct: 168 RGDGRRWADFLNSMVFTMRVEVNLREDLLTIGAFVPVGASRRAEAAESPSEGAG 221 >gi|113475696|ref|YP_721757.1| glycine cleavage system aminomethyltransferase T [Trichodesmium erythraeum IMS101] gi|110166744|gb|ABG51284.1| aminomethyltransferase [Trichodesmium erythraeum IMS101] Length = 381 Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 101/296 (34%), Gaps = 52/296 (17%) Query: 24 QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILEIDRSKRDS 76 Q ++ +D+ L A+ + +L QG I+ F+ + +D F++ +K + Sbjct: 77 QYLVPSDLSGLEPGKAQYTVLLNSQGGIIDDFIFYRQSDDPLTNEARGFMIVNAATKAND 136 Query: 77 ---LIDKLLFYKLR------SNVIIEIQPINGV---------------------VLSWNQ 106 ++ L ++ V++ +Q + + ++ Sbjct: 137 KGWILSHLENSGVKFQDISEEKVLLAVQGPDAESYIQQFVKENLASIGFFGHADITVLDK 196 Query: 107 EHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 + + + E V L R+ + + LR+ + D Sbjct: 197 PGFIARTGYTGEDGFEIMVDPPVGVELWRSLLNAGVTPCGLGARDTLRLEAAMALYGQDI 256 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 P +A + L + KG +I +EV+ + + ++ + + G P+ Sbjct: 257 -DIKTTPLEAGLSWLVHLD-KKGEFIAREVLETQKREGVSKRLVGLEMLDRGIARHGYPV 314 Query: 221 LTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG---VRVKASFP 269 L+D +G + KA+A+A + K + + + + + G + P Sbjct: 315 LSDGKVVGEVTSGTKSPTLGKAIALAYVPKKLAKVGQKLEVEIRGKNYAAIVVKRP 370 >gi|282880069|ref|ZP_06288789.1| aminomethyltransferase [Prevotella timonensis CRIS 5C-B1] gi|281305942|gb|EFA97982.1| aminomethyltransferase [Prevotella timonensis CRIS 5C-B1] Length = 360 Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + GK A ++ I T DV P +L P G + L+ K+ E+ F Sbjct: 51 SHMGEVYITGKDAEKYVNYIFTNDVTNAPLNSIFYGMMLYPDGGTVDDLLVYKMGENEFF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111 L I+ + D ++ + + +V I+ L+ S Sbjct: 111 LVINAANTDKDVEWIRQHAEGYDVTIDHCSDYYSQLAIQGPEAESVVEEVLHLSCKDLAF 170 Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELR 148 I R +G I LR Sbjct: 171 YEAETIDVNGEQIIVSRTGYTGEDGFEIYGSQAYIVRAWDALMESKRCTPCGLGCRDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + I P + + + L K +IG+E +++ + +K + Sbjct: 231 FEAGLPLYGMEL-SKDITPVMSGLSMFC--KLDKPEFIGKEAIAKQKEEKPKQKVIGLEL 287 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMALTVHGV 262 +P G P++ D ++G + +L A+ ++ + + + Sbjct: 288 EGKAIPRHGYPVMKDGQQVGIITTGYHSISLDKSLAFALVDLEHSKLGTELEVQIRKKTF 347 Query: 263 RVKASF 268 Sbjct: 348 PCVVVK 353 >gi|119511353|ref|ZP_01630466.1| aminomethyltransferase [Nodularia spumigena CCY9414] gi|119463975|gb|EAW44899.1| aminomethyltransferase [Nodularia spumigena CCY9414] Length = 378 Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 44/261 (16%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-----FILEIDRSKRDS- 76 LQ ++ +D+ L A+ + +L PQG I+ ++ E+T ++ ++ S Sbjct: 75 LQRLVPSDLNRLQPGQAQYTVLLNPQGGIIDDIIVYYQGENTTGLQQAVIVVNASTTAKD 134 Query: 77 ---LIDKLLFYKL------RSNVIIEIQPINGV---------------VLSWNQEHTFSN 112 L+ +L ++ V+I +Q V Q Sbjct: 135 KAWLLQQLDLNQVEFQDLSPEKVLIAVQGTKAVKYLQPLVKEDLEPIKAFGHLQASILGK 194 Query: 113 SSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 +FI V L + LR+ + D Sbjct: 195 PAFIARTGYTGEDGFELMLDPDVGVELWEKLHQAGVTPCGLGARDTLRLEAAMALYGQDI 254 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220 T P +A + + + TKG +IG+EV+++ + + ++ + ++ G PI Sbjct: 255 -DDTTTPLEAGLSWVVHLD-TKGDFIGREVLAQQKADGVQKRLIGLQMSGRNIARHGYPI 312 Query: 221 LTDDIEIGTLGVVVGKKALAI 241 L+ D +G + L Sbjct: 313 LSADEVVGEITSGTLSPTLGY 333 >gi|332159412|ref|YP_004424691.1| glycine cleavage system aminomethyltransferase T [Pyrococcus sp. NA2] gi|331034875|gb|AEC52687.1| glycine cleavage system aminomethyltransferase T [Pyrococcus sp. NA2] Length = 398 Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 100/341 (29%), Gaps = 83/341 (24%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ + T DV P + +L +G I LI + + ++ Sbjct: 50 SHMGEILFRGKDALKFLQYVTTNDVSKPPAISGIYTLVLNERGAIKDETLIFNLGNNEYL 109 Query: 67 LEIDRSKRDSL---IDKLL-----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117 + D + L L F KL + ++ I + + + F ID Sbjct: 110 MICDADAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAMDLFGID 169 Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145 R+ D + + E D YH Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGKPEKALHVWE 229 Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177 LR+ G + + P A ++ Sbjct: 230 TILEAGKKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234 I K +IG+E + + + R + RK +P G + + IG + Sbjct: 288 IYWDKD-FIGKEALLKQKERGLGRKIVHFKMVDKGIPREGYKVYANGELIGEVTSGTLSP 346 Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVR---VKASFP 269 +A + + I+ + + V G R V + P Sbjct: 347 LLNVGIGIAFVKEEYAKPGIE--IEIDVRGARKKAVTVTPP 385 >gi|332798356|ref|YP_004459855.1| Aminomethyltransferase [Tepidanaerobacter sp. Re1] gi|332696091|gb|AEE90548.1| Aminomethyltransferase [Tepidanaerobacter sp. Re1] Length = 354 Score = 68.7 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 112/308 (36%), Gaps = 57/308 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G++A FL I+T ++ + A+ + + G + ++ K+ ++ Sbjct: 50 SHMGEILVKGENAGDFLNDILTNNIHKIKEGQAQYTIMTYDDGGTVDDLMVYKLSLTRYL 109 Query: 67 LEIDRSKRDSLIDKLL--------------FYKLRSNVIIEIQPIN--GVVLSWNQEHTF 110 L ++ + +D + + Y L I IQ G V E Sbjct: 110 LVVNAANKDKDFEHIKSLAPADVVVEDVSDDYGL-----IAIQGPESAGFVKELFGEIQL 164 Query: 111 SNSSFIDERFSIADVLLHRT----------WGHNE-------------KIASDIKTYHEL 147 +F F ++L RT +G E I + L Sbjct: 165 KPFNFRTIEFDSDSLILSRTGYTGGEGFEVYGSPEMTRRLFCKAVDFGVIPCGLGARDTL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G+ + P I P +A + I L+K + G++V+ R Q R+R + + Sbjct: 225 RFEAGLPLYGHELGPD-ITPVEAGLSRF--IDLSKP-FKGRDVL-RTQSEQRDRRRLIGL 279 Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVH 260 D +P P+ D ++G + V A+A+ +I +D A K + + Sbjct: 280 KLLDRGVPRPDYPVYYDGKQVGKVTSGGFAPYVKEYLAMALVKI-PLDDANDKLFEIEIR 338 Query: 261 GVRVKASF 268 G + +A Sbjct: 339 GKKHRAEK 346 >gi|217076311|ref|YP_002334027.1| glycine cleavage system aminomethyltransferase T [Thermosipho africanus TCF52B] gi|217036164|gb|ACJ74686.1| glycine cleavage system T protein [Thermosipho africanus TCF52B] Length = 436 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 48/280 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK + F+ +IT D L +A+ G + L KI ++ Sbjct: 122 SHMGQVLVEGKDSTNFVNYLITNDFKNLSNGEIVYTAMCNENGGFIDDLLAYKISDEKAF 181 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 L I+ + + + + L +V +E + + +++ + Sbjct: 182 LVINAANIEKDFEWMKNVALNFDVKLENKSDDYALIAIQGPNAQKTLQKLTDIDLESIGY 241 Query: 113 SSFIDERFSIADVLLHRTWGHNEK------------------------IASDIKTYHELR 148 +F+ + + L+ RT E + + LR Sbjct: 242 YTFVFGKVKDVEALISRTGYTGEDGFEIYTTDKDGIVKIWEELLNLGVKPAGLGARDTLR 301 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + ++ D T+ P +A + + K ++G+ + + + R+ Sbjct: 302 LEASLLLYGNDM-DETVTPLEAGIKW--AVKFDKE-FVGKAALEKQLEEGLKRRLKGFKL 357 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 + G + D EIG + +A+ Sbjct: 358 IDKGIARHGYKVFKDGREIGVVTSGTFSPTLDESIGMALI 397 >gi|312080836|ref|XP_003142770.1| hypothetical protein LOAG_07189 [Loa loa] gi|307762068|gb|EFO21302.1| hypothetical protein LOAG_07189 [Loa loa] Length = 75 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 L ++ ++ GK FLQA+IT D+ L A+ + +L +G+I+ ++ + Sbjct: 17 LYNLRHRGLLRAKGKEVFQFLQALITNDIRRLADGRAQYALLLNSRGRIVEDLILYR 73 >gi|307189253|gb|EFN73696.1| Aminomethyltransferase, mitochondrial [Camponotus floridanus] Length = 453 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK A +L+++ T D+ L A + +G IL +I+K +ED + L + Sbjct: 135 RVSGKDAGEYLESLTTCDLKNLNKGAATLTIFTNEKGGILDDLIITKDDEDKYFLVSNAG 194 Query: 73 KRDS----LIDKLLFYK-----------------------------LRSNVIIEIQPING 99 +RD L+++ +K L+S V ++Q + Sbjct: 195 RRDEDSQLLLERQKDFKEVGKNVFVDFLEPLQQGLIALQGPTAATVLQSLVNFDLQTLKF 254 Query: 100 VVLSWNQ-----------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 + + +T + I A L+ + + + + + LR Sbjct: 255 MYSVKTEILGSRIRISRCGYTGEDGFEISVPAKDAINLVEKLLENPDVKLAGLGARDSLR 314 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIG-QEVVSRIQHRNIIRKRPMI 206 + G+ D +T P +A + L + + G Q+++S+I+ + +KR + Sbjct: 315 LEAGLCLYGNDIDENTT-PIEAALTWLVAKRRRTEANFPGAQQILSQIK-TGVTKKRVGL 372 Query: 207 ITGTDDLPPSGSPILT-DDIEIGTLGV 232 + G G+ ILT + +G++ Sbjct: 373 LLGQGPPARQGASILTPEGERVGSVTS 399 >gi|160903341|ref|YP_001568922.1| glycine cleavage system aminomethyltransferase T [Petrotoga mobilis SJ95] gi|160360985|gb|ABX32599.1| glycine cleavage system T protein [Petrotoga mobilis SJ95] Length = 441 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 100/309 (32%), Gaps = 52/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A F+ +IT +V +P S + G IL L K++E+ + Sbjct: 124 SHMGELFVQGKDAQKFVNYLITNNVEKIPIGKIVYSPMCNEDGGILDDLLAYKLDEEKIL 183 Query: 67 LEIDRSK------------------------------------RDSLIDKLLFYKLRS-- 88 L ++ S +D L L L S Sbjct: 184 LVVNASNTQKDFDWVRKQSSSFNVEVINKSDEYCQIAFQGPKSQDQLQKYLKDIDLDSIE 243 Query: 89 ----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV-LLHRTWGHNEKIASDIKT 143 + + ++ ++ ++ ++ L + + + + Sbjct: 244 YYSFKI-LGLEGEEVILSRTGYTGEDGFELYLSPAIAVKVWDRLIQLAKEVDGKPCGLGS 302 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR ++ D +T P +A + + K +IG+E + + + I RK Sbjct: 303 RDTLRFEPKMLLYGNDMDENTT-PLEAGLSWT--VDFNKE-FIGKEALLKQKEEGIKRKL 358 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 + G I D+ IG + V K LA+ + K ++ +++ Sbjct: 359 VGMEVHDKMPVRHGYEIFKDNENIGFVTSGVKSPTLGKNLALGYVSKEFSKLETIVSIKA 418 Query: 260 HGVRVKASF 268 ++A Sbjct: 419 REKLLEAEV 427 >gi|313889012|ref|ZP_07822671.1| glycine cleavage T-protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844998|gb|EFR32400.1| glycine cleavage T-protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 336 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 47/299 (15%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-- 68 + V GK A FL + D+ + A + +L +GKI+ ++ ++E D F++ Sbjct: 27 VLDVKGKDAADFLDKVFVNDIKNMKDTHALYTTMLNEEGKIIDDVIVFRLEADKFLISTL 86 Query: 69 -IDRSKR-------------DSLIDKLLFYKL---RSN--V-IIEIQPINGVVLSWNQEH 108 ID+ ++ DKL + + +S V I + I+ + +++ Sbjct: 87 YIDKMIEWFDKFKNGSDVEYKNITDKLTMFAIQGPKSKDLVNKIVDKDISDLKFFTIEDN 146 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYHELRINHGIVDPNTDFL 161 + + + R L + + + EKI K + + I ++ + Sbjct: 147 SLGDLDLMVARAGFTGELGYELYVESDKKDILEEKIKEAGKEFDLVNITSDVIIGSLPGE 206 Query: 162 PSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + P + +IG+E + + + N+ R D Sbjct: 207 KGYVLMSDLEGANPLEVGYGWTVAWDSD---FIGKEALLKAK-ENVTRDLFGFELLEDGE 262 Query: 214 PPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G +L D +IG + V + D K + + + Sbjct: 263 VEAGDEVLLDGKKIGRVTKFTYGYTVEKFIGYCMIEKDAAVEGKKVEIKTKAGSLEARL 321 >gi|220907450|ref|YP_002482761.1| glycine cleavage system T protein [Cyanothece sp. PCC 7425] gi|219864061|gb|ACL44400.1| glycine cleavage system T protein [Cyanothece sp. PCC 7425] Length = 375 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 101/310 (32%), Gaps = 53/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65 S+ ++ GK LQ ++ +D+ L +A+ S L +G +L + +E D Sbjct: 59 SHMGKFRLSGKDLRTHLQPLVPSDLSGLQPGVAKYSVFLNARGGVLDDLIFYVLEADQTG 118 Query: 66 ----ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERF 120 +L ++ + LL + V +E + V+++ + +D Sbjct: 119 IEQGLLIVNAATTAKDKAWLLHHLETEAVELEDISASNVLIALQGPDAANTLQPLVDVDL 178 Query: 121 SIA------------------------------------DVLLHRTWGHNEKIASDIKTY 144 S+ L R+ + + Sbjct: 179 SLLKNYTHCSVRLLDTTAWLARTGYTGEDGFEIMVEAATGEALWRSLLDLGVMPCGLGAR 238 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + D + P +A + + +S K +IG+ + + + + R+ Sbjct: 239 DTLRLEAAMPLYGQDI-DDSTTPLEAGLGWV--VSWDKEDFIGKASLIQQKQAGVPRRLV 295 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 + + G +L D +GT+ ALA + A+ + +A+ Sbjct: 296 GLQMQGRHIARPGYAVLFADQPVGTVTSGSFTPTLAQPIALAYVPPELA--AVGQELAVE 353 Query: 259 VHGVRVKASF 268 + G A+ Sbjct: 354 IRGKACPATV 363 >gi|94986005|ref|YP_605369.1| glycine cleavage system T protein [Deinococcus geothermalis DSM 11300] gi|94556286|gb|ABF46200.1| glycine cleavage system T protein [Deinococcus geothermalis DSM 11300] Length = 374 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 83/280 (29%), Gaps = 53/280 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A FLQ + T DV L A+ + + G ++ + ++ + F+ Sbjct: 74 SHMGEFRVTGPDAEAFLQRVTTNDVTKLKPGRAQYNWLPNESGGLVDDIYVYRVGPEEFL 133 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-NGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + + L Y +V + + G++ + D S Sbjct: 134 LVVNAANIEKDWAHLQRYASGFDVGLSDESDRWGLLAVQGPQSETLLQPHTDVDLSAKKK 193 Query: 124 -----------DVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 DV L RT E + + LR+ Sbjct: 194 NAYFPATLLGFDVWLARTGYTGEDGFEIFVKAEEAEALWEALLALGLTPAGLGARDTLRL 253 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G +F + P + + ++ V R + R + + Sbjct: 254 EAGFPLYGHEFA-EDLHPLASSYTWV---------VKDKDHVGRAGMQAAPPVRLIGLAL 303 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243 G P+L + IG + A+A+ R Sbjct: 304 ERVPVREGYPVLLGNERIGHVTSGTSSPTLGHPIAMALVR 343 >gi|77361390|ref|YP_340965.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas haloplanktis TAC125] gi|123587845|sp|Q3IFV9|GCST_PSEHT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|76876301|emb|CAI87523.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Pseudoalteromonas haloplanktis TAC125] Length = 360 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 43/288 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ A FLQ ++ DV L A + +L QG ++ +I ++ Sbjct: 50 SHMTIVDIQGEQAQAFLQKLVANDVAKLTVPGKALYTPMLNEQGGVIDDLIIYFFSNTSY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + L V + + G++ ++ + + A Sbjct: 110 RLVVNSATREKDLAHLAKISADFAVTVTERNEFGMIAVQGPNAKAKTATLLTAEQNAAIE 169 Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149 L + + + LR+ Sbjct: 170 GMKPFFGVQTGDLFIATTGYTGEDGYEIVVPKEQAADLWQQLLDAGVAPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M +IG++V+ + + K+ ++ Sbjct: 230 EAGMNLYGLDM-DESVSPLAANMAWTIAWEPQSRDFIGRDVLVQQRADQSTDKQVGLVLE 288 Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKK 253 + SGS ++ D E GT +G ++A+AR+ + + Sbjct: 289 EKGILRSGSKVIVDGGEGVITSGTFSPTLG-YSVALARVPRSTGDTAQ 335 >gi|330469405|ref|YP_004407148.1| glycine cleavage system aminomethyltransferase T [Verrucosispora maris AB-18-032] gi|328812376|gb|AEB46548.1| glycine cleavage system aminomethyltransferase T [Verrucosispora maris AB-18-032] Length = 374 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 89/315 (28%), Gaps = 61/315 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTF 65 S+ ++V G A F+ A ++ D+ + A+ + G ++ + +D Sbjct: 63 SHLGKVRVTGPGAAEFVNACLSNDLGRIEPGRAQYTLCCDEATGGVVDDIIAYLYADDHV 122 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ--------------- 106 L + + ++ +L R+ V + + VL+ Sbjct: 123 FLIPNAANTAEVVRRL-----RAAAPPQVTVTDEHEAYAVLAVQGPRSADLLDALGLPTG 177 Query: 107 -------EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTY 144 T R + A + Sbjct: 178 HEYMSFSPATLDGVELTVCRTGYTGERGYELVVPAADAVAVWDALFAAEPTPQACGLAAR 237 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-R 203 LR G D I P A + K + G++ + + R R Sbjct: 238 DTLRTEMGYPLHGQDLSLE-ISPVQARTGW--AVGWDKPAFWGRDALLAEKAAGPTRTLR 294 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 + + G +P G + D ++GT+ K+ +A+A ID A+ G L + Sbjct: 295 GLTVAGRG-IPRPGMAVFHGDTQVGTVTSGTFSPTNKQGIALALIDTA-PALPDGTELQI 352 Query: 260 H----GVRVKASFPH 270 + P Sbjct: 353 DIRGRHTPAHLTRPP 367 >gi|72383478|ref|YP_292833.1| hypothetical protein PMN2A_1642 [Prochlorococcus marinus str. NATL2A] gi|72003328|gb|AAZ59130.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] Length = 282 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 94/279 (33%), Gaps = 40/279 (14%) Query: 12 IKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEED--TFILE 68 + + G+ FL TADV L+ +G L L ++ +D ++ Sbjct: 16 LLLKGQGTTSFLHGQTTADVFAQKELDRIFMCCWLSTKG-ALKAVLEIRLSDDMAEIVII 74 Query: 69 IDR--SKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 S RD + V +E I PI ++ +NSS+ D FS Sbjct: 75 CGEINSIRDGFES-----VIFPADKVKLEVIDPIR------RRQEINNNSSWKDSDFSWI 123 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 D G + + + +I GI + + P++ + + I+L KG Sbjct: 124 DDNTFSIDGITKYKKATKEELEGWKIRQGIPSFDKEM-NGETNPYELGLA--DTINLDKG 180 Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDD------IEIGTLGVVVG 235 CY+GQE +++ ++ R G +D G + +G + + Sbjct: 181 CYLGQEAMAKFFRSKSLKYQLRYWEAYGENDNFQIGKKFFNTNKNEGYKKNVGVVTSSIR 240 Query: 236 K-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ + + + +G + P Sbjct: 241 VDDNFFNGLALIK----KTFLDHDFCFSENGDSITIKKP 275 >gi|325954164|ref|YP_004237824.1| aminomethyltransferase [Weeksella virosa DSM 16922] gi|323436782|gb|ADX67246.1| Aminomethyltransferase [Weeksella virosa DSM 16922] Length = 358 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 52/312 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ +I +LQ I++ DV + A+ +A+ +G I+ +I ++ D ++ Sbjct: 49 SHMGQIFVKGEKSIDYLQHILSNDVSKIADGQAQYNAMTNEEGGIVDDLIIYRLAADHWM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 + ++ S D + Y ++ ++ + + S D S Sbjct: 109 VVVNASNAGKDWDWMNKYNTFDVELVNESDNRSLLAIQGPKAIEAMQSLTDVDLSSIPFY 168 Query: 122 ---------------------------------IADVLLHRTWGHNEK---IASDIKTYH 145 AD + + E I + Sbjct: 169 HFVVGKFAGIDNVLISATGYTGSGGFEVYFSNEAADTIWEKVLEAGEGFGIIPCGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P++A + + + +IG + + + + + + RK Sbjct: 229 TLRLEKGYCLYGNDI-NETTSPYEAGLGWVTKLDTN---FIGSDALKKQKEQGVDRKLVA 284 Query: 206 IITGTDDLPPSGSPILTDDI-EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G ++ D+ +G + LA ID + + Sbjct: 285 FKMLERGIPRQGYKVVDDNENTVGEVTSGTQSPMLKQGIGLAYVHIDFAKIGTTIRIKIR 344 Query: 259 VHGVRVKASFPH 270 + + Sbjct: 345 DKNILAEVVKAP 356 >gi|288958429|ref|YP_003448770.1| aminomethyltransferase [Azospirillum sp. B510] gi|288910737|dbj|BAI72226.1| aminomethyltransferase [Azospirillum sp. B510] Length = 370 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 95/304 (31%), Gaps = 45/304 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G L+ ++ D+ L R + L QG IL +++ D Sbjct: 57 SHMGQVRLTGADPAAVLETLVPGDITGLAQGRMRYTLFLNEQGGILDDLMVTN-GGDHLF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + ++ + L KL V +E+ ++ + F+ E + Sbjct: 116 LVVNAACKEQDVAHL-REKLAGKVEVELLDDLALMALQGPLAAEVMARFVPEAAGMKFMS 174 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+++ E A + LR+ Sbjct: 175 CLSASFKGVPVILTRSGYTGEDGYEISCDKADAEMIARALLAEAEVEAIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P + ++ L +G + G +++ R R+R I Sbjct: 235 AGLCLYGHDIDT-TTTPVEGALEWTLPKRRRAEGGFPGYDIIHRQLTGGATRRRVGIQPD 293 Query: 210 TDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + I + IG + +A+ +D A+ + L V G + Sbjct: 294 GRQPAREHTEIQDANGNRIGEITSGGFGPTAGAPVAMGYVDIAHAALDTPLTLVVRGKPL 353 Query: 265 KASF 268 A Sbjct: 354 PARV 357 >gi|282856321|ref|ZP_06265601.1| aminomethyltransferase [Pyramidobacter piscolens W5455] gi|282585824|gb|EFB91112.1| aminomethyltransferase [Pyramidobacter piscolens W5455] Length = 368 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 52/277 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ +++T DV + + + + TP G ++ L+ + ++ ++ Sbjct: 51 SHMGEVTVVGPKAEAWISSLVTNDVAEMHDGQVQYNIMCTPTGGVVDDLLVYRYNKERYL 110 Query: 67 LEIDRSKRDS----LIDKLL---------FY-------------KLRSNVIIEIQPINGV 100 L I+ + + D L LR V + + Sbjct: 111 LVINAANVEKDWAWFNDHLTDGVKIENISMQTAEVALQGPNAEAILRKIVDFDPATLE-- 168 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143 + I R + K A + Sbjct: 169 FFHFKDPVDVKGIKAIVSRTGYTGEDGFEIYVDWSKGAELWNIVMEAGKDLGLMPIGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202 LR G+ +F T+ P +A + L K G +IGQ V+ + + + RK Sbjct: 229 RDSLRFEAGLPLCGQEFT-DTLGPLEAGFGFF--VKLDKAGGFIGQPVLKQQKADGLKRK 285 Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKA 238 +P + D IG + G Sbjct: 286 IVAAKLIDKGVPRHEMEVADKDGNIIGVVTT--GGYG 320 >gi|226360289|ref|YP_002778067.1| glycine cleavage system aminomethyltransferase T [Rhodococcus opacus B4] gi|226238774|dbj|BAH49122.1| aminomethyltransferase [Rhodococcus opacus B4] Length = 366 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 98/307 (31%), Gaps = 50/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + TP G ++ + + D Sbjct: 54 SHLGKALVRGTGAAAFVNSALTNDLGKIGPGKAQYTLCCTPSGGVIDDLIAYYVSPDEVF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114 L + + ++ L V +E Q + V+ + + Sbjct: 114 LVPNAANTADVVAALTA-AAPDGVTVEDQHRDFGVIAVQGPKSVDVLTALGLPTDIEYMA 172 Query: 115 FIDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHEL 147 F D + V + R+ W +EK+ + + L Sbjct: 173 FADATWDGVPVRVCRSGYTGEIGFELLPRWEDSEKLFRAAVEQVRARGGQVAGLGARDTL 232 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G + I P +A I TK + G+E ++ + RK I Sbjct: 233 RTEMGYPLHGHELSLE-ISPLEARCGW--AIGWTKPKFWGRETLADEKASGPARKLWGIK 289 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH--G 261 + +G +L D IG K +A+A +D + G ++V G Sbjct: 290 ALDRGVLRAGQTVLRDGEPIGETTSGTFSPTLKVGIALALLDS-GSGVSAGDEISVDVRG 348 Query: 262 VRVKASF 268 ++A Sbjct: 349 RSLRAEV 355 >gi|257056952|ref|YP_003134784.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] gi|256586824|gb|ACU97957.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] Length = 346 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 107/303 (35%), Gaps = 53/303 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS I+V G A + Q ++ DV L + S +L +G ++ ++ ED Sbjct: 39 LSGVRLIEVTGDGATEYAQRVLARDVEYLTDERCMTSLVLDAEGTVV-DQVVVWGREDGL 97 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQE-------------- 107 +LE D L++ L R+ V I + + + Sbjct: 98 LLESSVGFGDRLLEHL-----RAQAGDDVTITDRTGELALFALEGPYAWGVVGRLIDAEL 152 Query: 108 HTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKT--------------YHELR 148 S +D + +++ RT +G+ +++D Y L Sbjct: 153 AALPFESVVDTTWDGEEIVFARTGSTAEYGYKVIVSADSAEKLWHKAVAEAAPAGYEALE 212 Query: 149 IN-HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + + P + + + L + +TK ++G++ V ++R + Sbjct: 213 LAMLEVRQPVVRHEAGSADIVEMGANWL--VDITKEDFLGRDAVL-AAFNAPAKRRTIGF 269 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVR 263 +G + +P G+P+ +G + V A L +AR++ A G+ L+V Sbjct: 270 SGGESVPEPGTPVTIGGERVGEVVHAVRSIALDAPLGLARVEPDVAA--AGLTLSVGDAE 327 Query: 264 VKA 266 V Sbjct: 328 VTT 330 >gi|292493952|ref|YP_003533094.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloferax volcanii DS2] gi|291369403|gb|ADE01633.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloferax volcanii DS2] Length = 837 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 92/320 (28%), Gaps = 82/320 (25%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A+ FLQ ++T D+ + R SA+L G +L ++++ ++ F+L Sbjct: 520 IEVSGPGALEFLQGLLTNDMD-VTPGRMRYSAMLNEDGGVLADLTVARLGDERFVLFTGG 578 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118 +L + V E P +G V + + Sbjct: 579 GSSATLHSR--------WVT-EHAPDDGSVDVTAHVSSRTGIGVFGPDSRKVLSDLVEAD 629 Query: 119 ------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR------ 148 R S A L + E + + +R Sbjct: 630 LSNDEFPFYSAQETYLGSIPVTMLRLSYAGELGWEIYAPTEY---GSQLWDAIREAGEEY 686 Query: 149 --------------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + G TD P P++A + + ++G+ + Sbjct: 687 DIAPVGWAALDSTSMEKGFRLWGTDLTPEH-NPYEAGIGFAADLDTD---FVGKAALVAD 742 Query: 195 QHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDK 246 ++ + R + IT ++ + +G P+ DD +G + A A + Sbjct: 743 KNDDSPSDRIVPITLDEEEAVVDAGHPVFVDDEVVGYCCRADYGYTIDAGIAYAYLPEEY 802 Query: 247 VDHAIKKGMALTVHGVRVKA 266 + Sbjct: 803 ASSGQDVEIRYEGDAHPATV 822 >gi|78189613|ref|YP_379951.1| glycine cleavage system aminomethyltransferase T [Chlorobium chlorochromatii CaD3] gi|123579384|sp|Q3AQ17|GCST_CHLCH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|78171812|gb|ABB28908.1| aminomethyltransferase [Chlorobium chlorochromatii CaD3] Length = 366 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 94/272 (34%), Gaps = 52/272 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF Sbjct: 49 SHMGNFFVKGSRALEFLQFVTTNDLAKVVDGQAQYNLMLYPSGGIVDDLIIYRMSADTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE---------------HTF 110 L ++ S D L + V +E +++ Sbjct: 109 LIVNASNADKDFAWLQQHIDQFEGVTLEDHTERLSLIALQGPLALSILNRLFPSIDGEAL 168 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDF--- 160 + F F+ DV++ RT EK + I + L + G D Sbjct: 169 GSFHFCSASFNGFDVIIARTGYTGEKGVEMCVPNEAAIALWEAL-MAAGAADGIQPIGLG 227 Query: 161 -----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRK 202 + P +A + + + + KG +IG+E + +QH ++ Sbjct: 228 ARDTLRLEMGYSLYGHEINQDTNPLEARLKWV--VKMDKGHFIGKEACEQAMQH---PQR 282 Query: 203 RPMIITGTD-DLPPSGSPILTDDIE-IGTLGV 232 + + LP G + D + IG + Sbjct: 283 TVIGFSLEGRALPRQGFTLYNSDRQAIGVVCS 314 >gi|304309777|ref|YP_003809375.1| Glycine cleavage system T protein [gamma proteobacterium HdN1] gi|301795510|emb|CBL43708.1| Glycine cleavage system T protein [gamma proteobacterium HdN1] Length = 360 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 45/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A +A+ QG I+ ++ ++ + Sbjct: 50 SHMTIVDVTGADAKRWLQKLLANDVERLLEPGKALYTAMCNEQGGIIDDLIVYRMAV-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 + ++ + R+ + + + + I Q ++ + + + Sbjct: 109 RMVVNCATREKDMAWMQKQLVGFDAQIRHQDQLAIIAVQGPRAVQKTADVLGNAYATAIA 168 Query: 121 --------SIADVLLHRTWGHNE-------KIASDIKTY----------------HELRI 149 + + + RT E A+ + LR+ Sbjct: 169 QLKTFHGIPVGEWFISRTGYTGEDGLELMLPAAAAESIWRSLLEHGVRPCGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ +D TI P +A M +IG++ + + + R ++ Sbjct: 229 EAGMNLYGSDM-DETISPLEAGMGWTLAWQPEMRRFIGRDALEAQKAAGVARAFTGLVMA 287 Query: 210 TDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + T + GT +G A+A+AR+ + + + + VK Sbjct: 288 GKGVLRGHQKVRTSLGEGETTSGTFSPTLG-YAIALARL-PAGASGEAEVEIRGKWQPVK 345 Query: 266 ASFPH 270 P Sbjct: 346 IVKPP 350 >gi|313623891|gb|EFR94005.1| glycine cleavage system T protein [Listeria innocua FSL J1-023] Length = 362 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 61/312 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRDSLIDKL-------------------------LFYKLRSNVI---------- 91 L ++ + + + + K+ S + Sbjct: 112 LVVNAANTEKDFEWMVQNIVGDVTVKNVSSEFGQLALQGPNAEKILSKLTDANLSSISFF 171 Query: 92 --IEIQPINGVVLSWNQEHTFSNSSFIDER-----FSIADVLLHRTWGHNEKIAS-DIKT 143 IE + GV + S S + E AD E +A + Sbjct: 172 GFIEDADVAGV------KTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGA 225 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR+ + + I P +A ++ + L K +IG++ + + + RK Sbjct: 226 RDTLRLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKQALINQKEAGLTRK 282 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 I +P P+ +D EIG + LA+ ID + + + Sbjct: 283 LVGIELIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIGLAL--IDTAYTELGQELE 340 Query: 257 LTVHGVRVKASF 268 + + +VKA Sbjct: 341 VGIRNKKVKAKV 352 >gi|14521302|ref|NP_126777.1| glycine cleavage system aminomethyltransferase T [Pyrococcus abyssi GE5] gi|11132503|sp|Q9UZP8|GCST_PYRAB RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|5458520|emb|CAB50008.1| gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine cleavage system T protein) [Pyrococcus abyssi GE5] Length = 398 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ + T D+ P + +L +G I LI + + ++ Sbjct: 50 SHMGEIYFRGKDALKFLQYVTTNDISKPPAISGIYTLVLNERGAIKDETLIFNMGNNEYL 109 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117 + D + L F KL + ++ I + + + F ID Sbjct: 110 MICDSDAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLARDLFGID 169 Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145 R+ D + + E D YH Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 229 Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177 LR+ G + + P A ++ Sbjct: 230 RILEEGKKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234 I K +IG++ + + + R + RK +P G + + IG + Sbjct: 288 IYWDKD-FIGKDALLKQKERGLGRKLVHFKMVDKGIPREGYKVYANGELIGEVTSGTLSP 346 Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + I+ + + + P +Y Sbjct: 347 LLNVGIGIAFVKEEYAKPGIEIEVEIRGARKKAITVTPPFY 387 >gi|163781956|ref|ZP_02176956.1| aminomethyltransferase (glycine cleavage system T protein) [Hydrogenivirga sp. 128-5-R1-1] gi|159883176|gb|EDP76680.1| aminomethyltransferase (glycine cleavage system T protein) [Hydrogenivirga sp. 128-5-R1-1] Length = 351 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 36/291 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A LQ + T ++ L + + +G + + + E+ F Sbjct: 57 SHMGRFFVSGKDAFGVLQKLTTNNLEKLKPGRVQYNLFTNERGGVKDDVTVYMLSEEEFF 116 Query: 67 LEIDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGV--------VLSWNQEHTFSNS 113 L ++ R+ + + + + V I +Q G V H + Sbjct: 117 LCVNAGNREKIKEWVGKHIPLEDASDRTVQIALQGREGERILSRFYDVSDLKYYHFKTFG 176 Query: 114 SFIDERFSIADVLLHRTWGH------------NEKIASDIKTYHELRINHGIVDPNTDFL 161 I R + E + + LRI G + Sbjct: 177 DTIVSRTGYTGEDGFEVYAPVDEGVELFKELVKEVKSCGLGARDVLRIEAGFPLYGHEI- 235 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 I P +A +D + L+K ++G+E + R RK + +P G + Sbjct: 236 SEDITPLEANLDRF--VDLSKE-FVGREALLE---RKPERKLFGLEMVDKGVPREGYRVF 289 Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 +D EIG + K +A+ +D + + L V ++A Sbjct: 290 KEDREIGVVSSGTFSPTLGKGIALCFVDIEERKEGNEVFLEVRNRLLRAVL 340 >gi|13471340|ref|NP_102909.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] gi|14022085|dbj|BAB48695.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] Length = 815 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 77/287 (26%), Gaps = 54/287 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A FLQ + D+ + + +L +G I +S++ + + Sbjct: 490 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIIYTQMLNQRGGIESDLTVSRLSDTAY 548 Query: 66 ILEIDRSKRDSLIDKLLFYK-----------------------LRS---NVIIEIQPING 99 L + + + L + R V Sbjct: 549 FLVVPGATLQRDLAWLRRHVGEEFVVITDVTAAESVLCLMGPDARKLIQKVSPNDFSNEN 608 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142 QE R + L + ++ A + Sbjct: 609 NPFGTFQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHIFEAIDEAGADVGLKLCGLH 668 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T RI D +A + + KG +IG++ V + + + R+ Sbjct: 669 TLDSCRIEKAFRHFGHDITDEDNV-LEAGLGF--AVKTAKGDFIGRDAVLKKKDAGLNRR 725 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 + L IL D +G + G L Sbjct: 726 LVQFRLKDPQPLLFHNEAILRDGRIVGPITSGNYGHHLGGAIGLGYV 772 >gi|104783407|ref|YP_609905.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Pseudomonas entomophila L48] gi|95112394|emb|CAK17121.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Pseudomonas entomophila L48] Length = 373 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 104/309 (33%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L+ ++ D++ LP + R + PQG IL +++ + +DT Sbjct: 54 SHMGQIILRGNDAARALETLVPVDIVDLPVGMQRYAMFTNPQGGILDDLMVANLGDDTLF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 L ++ + ++ + L + + ++ +Q V + + +F+ Sbjct: 114 LVVNAACKEQDLAHLRKHIGDRCEIQPLFEARALLALQGPAAVKVLERLAPEVAGMTFMQ 173 Query: 118 ER---FSIADVLLHRT------------------------WGHNEKIASDIKTYHELRIN 150 R D + R+ E + LR+ Sbjct: 174 FRPITLLGNDCFVSRSGYTGEDGYEISVPAAAAEALARRLLAEPEVQPIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 G+ D +T +L+ ++ + G + G + V Q + RKR + Sbjct: 234 AGLCLYGHDMDTTTTPIEASLLWAISKVRRADGTRAGGFPGADTVFAQQQAGVARKRVGL 293 Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259 + G+ I+ +G + G +A+A +D A+ + V Sbjct: 294 LPQERTPVREGAQIVDQAGKVVGEVCS--GGFGPTLGAPVAMAYVDSEHAALDTELFALV 351 Query: 260 HGVRVKASF 268 G +V Sbjct: 352 RGKQVALKV 360 >gi|57641970|ref|YP_184448.1| glycine cleavage system aminomethyltransferase T [Thermococcus kodakarensis KOD1] gi|73919633|sp|Q5JDG3|GCST_PYRKO RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|57160294|dbj|BAD86224.1| glycine cleavage system protein T [Thermococcus kodakarensis KOD1] Length = 398 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 90/333 (27%), Gaps = 78/333 (23%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAF 117 Query: 75 DSLIDKLLFYK----LRSNVIIEIQ--------------------------PINGVVLSW 104 + L K ++ +EI+ IN + Sbjct: 118 EKLDAWFNAIKRGIEKFGDIDLEIENKTYDMAMFSIQGPKARDLAKELFGIDINDLWWFQ 177 Query: 105 NQEHTFSNSSFIDERFSIADVLL-----------HRTWGHNEKIASDIKTY--------- 144 +E + R H + + + Sbjct: 178 AKEVELDGIKMLLSRSGYTGENGFEVYFEDANPYHPDPSKRGEPEKALHVWKTILEAGEK 237 Query: 145 -----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCY 185 LR+ G + + P A +D I K + Sbjct: 238 YGIKPAGLGARDTLRLEAGYTLYGNETKEKQLLSTDIDEVTPLQANLDF--AIFWDKE-F 294 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKAL 239 IG+E + + + R + K +P G + D IG + + Sbjct: 295 IGKEALLKQKERGLPSKMVHFKMVDKGVPREGYKVYKDGELIGEVTSGTLSPLLGIGIGI 354 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 A + + ++ + + + P +Y Sbjct: 355 AFVKPEYAVPGVEIEVEIRGKPKKAVTVAPPFY 387 >gi|318040799|ref|ZP_07972755.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. CB0101] Length = 379 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 107/312 (34%), Gaps = 63/312 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ +++ G A LQA++ D+ + A + +L QG I +I D Sbjct: 59 SHMGVLRLSGPGAKDLLQALVPTDLFRIGPGEACYTVLLNEQGGIRDDLIIYDRGWDEAT 118 Query: 64 ---TFILEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 +L I+ + ++ + +L + + + +GV+L+ + I Sbjct: 119 QAHELLLVINAACAEADTVWIRSQLE----PAGIQVADHKGDGVLLALQGPEAAAQLESI 174 Query: 117 D-------ERF--------SIADVLLHRTWGHNEKI-------ASDIKTY---------- 144 RF I + + RT E + + + Sbjct: 175 SGTSLAGLPRFGHRNLTLPGIGEAFVARTGYTGEDGFELLLGRGAGLSFWTLCQERGIQP 234 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR+ + +D ST P + + L + + K ++G+EV+ + Sbjct: 235 CGLGARDTLRLEAAMHLYGSDMDASTS-PLEVGLGWLVHLEMPKP-FVGREVLEQQTSSG 292 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGK-------KALAIARIDKVDH 249 + R+ + +P G +L E G+ +G V +A+A +D Sbjct: 293 VKRRLVGLQLQGRAIPRHGYSVLASGAEAGSTPIGTVTSGGWSPSLEAGIALALVDTAAA 352 Query: 250 AIKKGMALTVHG 261 + +A+ + G Sbjct: 353 KLGSQLAVEIRG 364 >gi|281412268|ref|YP_003346347.1| glycine cleavage system T protein [Thermotoga naphthophila RKU-10] gi|281373371|gb|ADA66933.1| glycine cleavage system T protein [Thermotoga naphthophila RKU-10] Length = 364 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D + Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ + + + + + +V I I ++ E + +++ Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEILNISDTTALIAFQGPEAQETLQELVEDSLEEIAY 168 Query: 123 ----------ADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147 + L+ RT E + K + L Sbjct: 169 YSFRKSIVAGVEALVSRTGYTGEDGFELMVETEDAPKVWDALMNLLRKIDGRPAGLGARD 228 Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R+ + D + P + + + + L K ++G+E + ++ + + ++ + Sbjct: 229 VCRLEATYLLYGQDM-DESTNPLEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVERKLV 282 Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + + + G +L + +G + ALA+ V ++K G L Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKVGDQLE 337 Query: 259 V 259 V Sbjct: 338 V 338 >gi|291296095|ref|YP_003507493.1| glycine cleavage system T protein [Meiothermus ruber DSM 1279] gi|290471054|gb|ADD28473.1| glycine cleavage system T protein [Meiothermus ruber DSM 1279] Length = 351 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 51/296 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A+ FLQ DV L A S + QG ++ + + E+ +++ ++ + Sbjct: 56 IKGPGALEFLQYATLNDVTKLKVGRAHYSMLPNAQGGVVDDIYLYRTGEEEYLMVVNAAN 115 Query: 74 RDSLIDKLLF----YKLRSN------VIIEIQPINGVVLSWNQEHTF-----SNSSFIDE 118 + + L +++R +I +Q V + T N +F+ + Sbjct: 116 IEKDWEHLQRLAEGFEVRLEDASDFFALIAVQGPQAVAVLQKLCDTDLVSRKKNDTFMGK 175 Query: 119 ------RFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGIVDP 156 RF+ + + LR+ G Sbjct: 176 LAGKWVRFARTGYTGEDGYEVFVAPDEAPAVWAALLEAGVTPCGLGARDTLRLEAGFPLY 235 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + T P D + + K + Q ++ +R + + +P Sbjct: 236 GHELT-DTTNPLCTPFDWV--VKGQKEFFGKQAMLD-----AACERRLVGLLVEGGIPRE 287 Query: 217 GSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G +L E+G L LA + D + + Sbjct: 288 GYRVLGGGKEVGILTSGTHSPVLKKGIGLAYVQSDWAGVGTALEVEIRGRAAPAAV 343 >gi|52630863|gb|AAU84891.1| aminomethyltransferase [Eubacterium acidaminophilum] Length = 371 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 93/310 (30%), Gaps = 54/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V GK A F+ ++ D+ L + P G + L+ K + ++ Sbjct: 54 SHMGEVEVKGKEAEKFINYLVPNDITVLEPNQVLYTQFCYPHGGTVDDLLVYKYTNEDYL 113 Query: 67 LEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110 L I+ + D + + + I + + N E Sbjct: 114 LVINAANVDKDYAWIVENSKGFDVSLK-NISPEVSEIALQGPNAEKILQKLTDTDLAQVK 172 Query: 111 ----------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144 +S + R + NE +++ + Sbjct: 173 FFYCKKDVNIGGASCLISRTGYTGEDGFEIYTSNEDVSAVWEKLMEAGKDLGIKPAGLGC 232 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 LR + + I P +A + + L K +IG+E + + + + RK Sbjct: 233 RDTLRFEVALPLYGNELG-EDISPLEAGLGYF--VKLDKEADFIGKEALKKQKAEGLKRK 289 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256 + + + + D ++G + ALAI + + + + Sbjct: 290 LVGLELKGKGIARHECEVYSGDKKVGFVTTGYQSPSTGKVVALAIVDTEYTEMGTQLEIQ 349 Query: 257 LTVHGVRVKA 266 + + V + Sbjct: 350 IRKNRVPAEV 359 >gi|313638061|gb|EFS03335.1| glycine cleavage system T protein [Listeria seeligeri FSL S4-171] Length = 362 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 101/311 (32%), Gaps = 47/311 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111 Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102 L ++ + + + + Y + V+ ++ I+ Sbjct: 112 LVVNAANTEKXXEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKVLTKLTDIDLSSISFF 171 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149 + ++ + I R + ++ + + LR+ Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 232 EAVLALYGQEL-SQEITPLEAGLNF--AVKLNKEADFIGKEALVKQKEAGLTRKLVGIEL 288 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262 +P + D +IG + LA+ + + + + + Sbjct: 289 IERGIPRHDYSVFQKDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348 Query: 263 RVKASFPHWYK 273 + K +YK Sbjct: 349 KAKVIATPFYK 359 >gi|83815405|ref|YP_445737.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855] gi|294507632|ref|YP_003571690.1| Aminomethyltransferase [Salinibacter ruber M8] gi|83756799|gb|ABC44912.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855] gi|294343960|emb|CBH24738.1| Aminomethyltransferase [Salinibacter ruber M8] Length = 374 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 105/326 (32%), Gaps = 68/326 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A+ +Q ++T D TL A + + TP G I+ ++ + ED ++ Sbjct: 56 SHMGEVLIQGDQALALVQHLVTNDAETLYDGRAMYTVMCTPDGGIIDDGIVYRRAEDEYL 115 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110 + ++ + R+ + D + + +L+ Sbjct: 116 MVLNAANRERDLTWMHDHNPM-----GATLRDISADTALLALQGPKALDIAQPFLDDDLD 170 Query: 111 ----------SNSSFID-----------------------ERFSIADVLLHRTWGHNEKI 137 + +F+D +R L Sbjct: 171 DLSFYHFWERTGGAFLDCETALISRTGYTGEPGLELYVPADRARDVWTTLLEAGADRGLK 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + + LR+ G+ D I P++A + L + L KG +IG+E + +I Sbjct: 231 PAGLGARDTLRLEAGLCLHGNDIT-EDITPYEARLGWL--VKLDKGDFIGREALRQIHEH 287 Query: 198 NIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251 RK + T+ P IL IG + + + + Sbjct: 288 GPERK-LVGFVATERGIPRHDDILQSAGGDAIGVVTSGTQSPLLDAGIGLGYVPNEPAYT 346 Query: 252 KKGMALTVHGVR----VKASFPHWYK 273 + G AL V R V+ + P +++ Sbjct: 347 EPGRALQVASRRRTFDVEVTEPPFHE 372 >gi|194337376|ref|YP_002019170.1| glycine cleavage system T protein [Pelodictyon phaeoclathratiforme BU-1] gi|238693398|sp|B4SED4|GCST_PELPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|194309853|gb|ACF44553.1| glycine cleavage system T protein [Pelodictyon phaeoclathratiforme BU-1] Length = 365 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FLQ + T D+ A+ + +L P G I+ +I +I+ +TF Sbjct: 49 SHMGNFYVRGARAKEFLQYMTTNDLDNAEDGQAQYNLMLYPHGGIVDDLIIYRIDSETFF 108 Query: 67 LEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ S + L + V++E +++ + + + Sbjct: 109 LIVNASNAQKDFEWLQQHIAAFEGVVLEDHTDQLSLIALQGPLALNILATVFPALDVPAL 168 Query: 120 ---------FSIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146 F +V++ T EK A + + Sbjct: 169 GAFRFCKVLFQGTEVMIAGTGYTGEKGVEICLPNAMALPLWEALFEAGKESGIQPIGLGA 228 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + P +A + + + + KG ++G+E + Q +++ Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VKMGKGHFMGKE--ACQQVEGNLKRG 283 Query: 204 PMIITGTDD-LPPSGSPILTDDI-EIGTLGV 232 + LP + D EIG + Sbjct: 284 VAGFSLDGRVLPRQHFKLYNSDRQEIGWVCS 314 >gi|157412638|ref|YP_001483504.1| aminomethyltransferase [Prochlorococcus marinus str. MIT 9215] gi|157387213|gb|ABV49918.1| Predicted aminomethyltransferase [Prochlorococcus marinus str. MIT 9215] Length = 278 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 92/258 (35%), Gaps = 38/258 (14%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70 + GK A F+ I T ++L + LTP+G + L+ + + + IL Sbjct: 17 SITGKDARKFVNGITTGNILN-SENEVIKTCWLTPKGVMRALIEIIFLESNLEVIILV-- 73 Query: 71 RSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +ID ++ +I IQ I+ SW D+ F I Sbjct: 74 -GNTHEIIDYFNQIIFPADDVIMSKPFLINRIQEIDEST-SWRTYRPIF-FKTEDKEFEI 130 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 L+ +D+K + +IN I + P + + L I K Sbjct: 131 YKNKLNLL------NPNDLKLW---KINQAIPSLEREI-NGKNNPLELGLKDL--IDFNK 178 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL------TDDIEIGTLGVV--- 233 GCY+GQE +S+I++ + +++ I + DI +G + + Sbjct: 179 GCYLGQETMSKIKNVSSLKQEIRIWKSFESNLNLDVEDKNLYINSAKDISVGKITSIFKL 238 Query: 234 -VGKKALAIARIDKVDHA 250 K LA+ + ++ Sbjct: 239 DSQIKGLAMIKRKYLEEG 256 >gi|322797540|gb|EFZ19584.1| hypothetical protein SINV_05762 [Solenopsis invicta] Length = 444 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 93/269 (34%), Gaps = 53/269 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK A +L+++ T D+ L A + +G IL +I+K +ED + + + Sbjct: 126 RVFGKDAGEYLESLTTCDLKNLSKGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAG 185 Query: 73 KRDS----LIDKLLFYK-----------------------------LRSNVIIEIQPING 99 +RD L+++ +K L+S V I++Q + Sbjct: 186 RRDEDSQLLLERQDDFKRIGKNVHVDFLDPLEQGLIALQGPTAATVLQSLVKIDLQTLKF 245 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYH 145 + E S S+ R L+ R + + + Sbjct: 246 MNSV---ETEVSGSNIRISRCGYTGEDGFEISVPANDAINLVERILEIPDVKLAGLGARD 302 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D P +A + L + + G E + +KR Sbjct: 303 SLRLEAGLCLYGHDI-NEDTTPIEAALTWLVAKRRRAEANFPGAERILSQIKTGPTKKRV 361 Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGV 232 ++ G G+PILT + +G++ Sbjct: 362 GLLLGQGPPAREGAPILTPEGERVGSVTS 390 >gi|186472033|ref|YP_001859375.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815] gi|184194365|gb|ACC72329.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815] Length = 827 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 102/300 (34%), Gaps = 59/300 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G+ A LQ I+ DV +P + + +L +G F ++++ +D ++L ++ Sbjct: 504 VKGRDAEAVLQQIVANDVA-VPPGTSVYTGMLNERGGYESDFTLTRLCDDQYLLVTGSAQ 562 Query: 74 R----DSLIDKL------------LFYKL------RSN---VIIEIQPINGVVLSWNQ-- 106 D++ ++ Y + R+ + N ++ Q Sbjct: 563 TTRDFDAIERRIPPDSHCMLVDVTSQYAVLAVMGPRARDLLASVSKAGWNNEAFAFGQSR 622 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149 E ++ R + L + E +T H LRI Sbjct: 623 EVDIGYATVRATRITYVGELGWELYVPVEFAVGVYETLHAAGKQFGLKNAGYYALDSLRI 682 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI-IRKRPMII 207 G + P T P +A + L K ++G+E + R+ R +++R ++ Sbjct: 683 EKGYRAWGRELSPET-NPFEAGLAF--ACKLDKDVPFVGREALVRL--RGEPLQRRLAVL 737 Query: 208 TGTDD---LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260 T + G I+ D + +G + L A+ + + D A LT Sbjct: 738 TADGASDRMLWGGEAIVRDGVAVGFVSSAAFGHTLGCPVAMGYVKRNDGAALDDAWLTSG 797 >gi|254481184|ref|ZP_05094429.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214038347|gb|EEB79009.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 398 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 86/301 (28%), Gaps = 72/301 (23%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L ++T DV L T +G+++ I ++ +D F+L Sbjct: 68 EISGPDAEAMLNRMVTRDVSKLGINRVTYVCWCTDEGRMIDDGTIFRLADDRFMLTCGSP 127 Query: 73 KRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEH----------------------- 108 L L V + LS Sbjct: 128 SVA----WLRKSVLGFDQVTVRDVTDETAALSLQGPTSCTVLQQMGLEDIATLKPFGIAH 183 Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147 F S + R L + W E + + L Sbjct: 184 FPFHGGSLMVSRTGFTGDLGYELWVTPEL---ALTLWDVLYAAGENYGIHPYGETATNMA 240 Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 R+ G + P+ +F P++ + L + K + G++ + + + Sbjct: 241 RLEAGFIMPDMEFNEALKTVHFEHDHTPYELSLGWL--VDFKKPHFNGRKALLAEKQQG- 297 Query: 200 IRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHA 250 + + + GS + +D +IG + + ALA+ +++ + Sbjct: 298 PHYTLVKLDIEGNKVADGSWLYSDKACRKKIGYVTSAMWSPSAKANIALAMIETPRLNGS 357 Query: 251 I 251 + Sbjct: 358 V 358 >gi|145299564|ref|YP_001142405.1| glycine cleavage system aminomethyltransferase T [Aeromonas salmonicida subsp. salmonicida A449] gi|166221536|sp|A4SP35|GCST_AERS4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|142852336|gb|ABO90657.1| glycine cleavage system T protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 365 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 98/309 (31%), Gaps = 47/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FLQ ++ DV L A S +L P G ++ + + + + Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTVPGKALYSGMLNPDGGVIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + + + V + +P ++ + + A Sbjct: 110 RLVVNSATREKDLAWIRHHAIDFAVSVTERPELAMIAVQGPNAKAKAAKVFTPEQNAAVE 169 Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149 L + N + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACDLWQALLDNGVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + D +I P A M +IG+ + + K+ ++ Sbjct: 230 EAGMNLYSQDM-DESISPLAANMAWTLAFEPASRQFIGRAALEAQKAAGTQLKQVGLVME 288 Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + +G P+ + + G + ++A+AR+ + D + + + Sbjct: 289 EKGVLRAGMPVTFTTASGEKREGVITSGSFSPTLGYSIALARVPR-DIGEQAEVEIRKKL 347 Query: 262 VRVKASFPH 270 V VK + P Sbjct: 348 VTVKVTKPA 356 >gi|148269849|ref|YP_001244309.1| glycine cleavage system aminomethyltransferase T [Thermotoga petrophila RKU-1] gi|166221577|sp|A5IKL0|GCST_THEP1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|147735393|gb|ABQ46733.1| aminomethyltransferase [Thermotoga petrophila RKU-1] Length = 364 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D + Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ + + + + + +V I I ++ E + +++ Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEILNISDTTALIAFQGPEAQETLQELVEDSLEEIAY 168 Query: 123 ----------ADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147 + L+ RT E + K + L Sbjct: 169 YSFRKSIVAGVEALVSRTGYTGEDGFELMLEAKDAPKVWDALMNLLRKIDGRPAGLGARD 228 Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R+ + D + P + + + + L K ++G+E + ++ + + ++ + Sbjct: 229 VCRLEATYLLYGQDM-DESTNPLEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVERKLV 282 Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + + + G +L + +G + ALA+ V ++K G L Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKVGDQLE 337 Query: 259 V 259 V Sbjct: 338 V 338 >gi|75760929|ref|ZP_00740939.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491599|gb|EAO54805.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 260 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 41/80 (51%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++ Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111 Query: 67 LEIDRSKRDSLIDKLLFYKL 86 L I+ S + + L + + Sbjct: 112 LVINASNIEKDYEWLASHVI 131 >gi|332885678|gb|EGK05924.1| aminomethyltransferase [Dysgonomonas mossii DSM 22836] Length = 365 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 107/317 (33%), Gaps = 58/317 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+PFLQ +++ DV TL A+ +AI+ QG I+ +I E ++ Sbjct: 49 SHMGEIWVKGPRALPFLQRMLSNDVATLEIGKAQYTAIINDQGGIVDDIIIYHYEPYKYM 108 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSN------------ 112 L ++ S + L + +L +E L+ + Sbjct: 109 LVVNASNIEKDWKWLTDHNEEL---ADLENSSDTIAQLAIQGPKALATLQKLTKIDLTMI 165 Query: 113 --SSFIDERF--SIADVLLHRTWGHNEKIASDIKTYHEL--RINHGIVDPNTDF------ 160 SF+ S D ++ G+ ++ Y E I + I + +F Sbjct: 166 PYYSFVIGSLKGSGLDSVIISNTGYTGAGGFELYFYPEYGEDIWNAIFEAGEEFGIKPIG 225 Query: 161 -------------------LPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNII 200 L T P +A + + T+G + +E++ + + + Sbjct: 226 LGARDTLRLEMGFCLYGNDLDHTTTPIEAGLGWI--TKFTEGKNFTAREILEKQKQEGVN 283 Query: 201 RKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253 RK +P G I+ ++ +IGT+ L + + Sbjct: 284 RKLCGFKMQEKGIPRHGYDIVNENNEKIGTVTSGTMSPTAKIGIGLGYIKPEYAKLGTSI 343 Query: 254 GMALTVHGVRVKASFPH 270 + + ++ + P Sbjct: 344 FIKVREKNLKAEVVKPP 360 >gi|83950288|ref|ZP_00959021.1| putative aminomethyltransferase protein [Roseovarius nubinhibens ISM] gi|83838187|gb|EAP77483.1| putative aminomethyltransferase protein [Roseovarius nubinhibens ISM] Length = 774 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 93/301 (30%), Gaps = 62/301 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE----------- 62 V G A+ LQ +T DV L + + +G +L + ++E+ Sbjct: 454 VVGPDAVELLQHCMTRDVAKLSQHRGFYALMCDARGSVLDDGTLFRLEDTAFRWCCGSDN 513 Query: 63 ---------DTFILEIDRSKRDSLIDKL------LFYKLRSNVII------EIQPINGVV 101 + L++ + L LR V+ + + Sbjct: 514 SALHLREQAEALGLDVRVLSLGDRVQNLAIQGPKSRDILR-EVVFTQPSRPALDNLKWFG 572 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTY 144 + + H F+ R L + + + Sbjct: 573 FTVARLHDRDGPMFMLCRTGFTGELGYEIFCDRNDAVEIWDGLMAAGEKHGLTPMGSAAL 632 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ +F P + ++ + + K +IG+E + R + R++ Sbjct: 633 DPLRLEAGLMIAGAEFGPDSD-AMESGLGF--AVDFKKPAFIGREALER--NATAPRRKL 687 Query: 205 MIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 + + T + P G PI ++G + A+A+AR+ + G L V Sbjct: 688 VGLKFTGMEAPHHGDPIFVGREQVGVVTSGAMSHELGHAIAMARV--AIECAETGGTLEV 745 Query: 260 H 260 Sbjct: 746 G 746 >gi|332140419|ref|YP_004426157.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550441|gb|AEA97159.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas macleodii str. 'Deep ecotype'] Length = 264 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPIL 221 P + LNGI KGCY+GQEVV+R + ++ + G + Sbjct: 135 GEYIPQMINVQALNGIDFDKGCYMGQEVVARTRFLGKNKRAAFSFKLEGKVDVTPGDAL- 193 Query: 222 TDDIEIGTLGVVVGKK 237 + ++G V GK Sbjct: 194 --EKQLGENWRVAGKI 207 >gi|320333609|ref|YP_004170320.1| Aminomethyltransferase [Deinococcus maricopensis DSM 21211] gi|319754898|gb|ADV66655.1| Aminomethyltransferase [Deinococcus maricopensis DSM 21211] Length = 354 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 89/281 (31%), Gaps = 54/281 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ FLQ T DV L A+ + +G ++ + + E ++ Sbjct: 54 SHMGEFRVRGPGALDFLQRATTNDVSKLKPGRAQYGLLPNDRGGLIDDLYVYMVAEQEYL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ + L +V + + G++ + + ++ S Sbjct: 114 IVVNAGNIERDFAHLQTLARDFDVTFVDESALWGLLAVQGPQAEATLQPHVNVDLSAKKK 173 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 DV + RT E + + + LR+ Sbjct: 174 NAFFPATLFDLDVFMARTGYTGEDGFEVFVKTDEAEVVWDKLLTLGVVPAGLGARDTLRL 233 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIIT 208 G +F P + G ++ + G+E ++ R +R + +T Sbjct: 234 EAGFPLYGHEF-SDDTHPLSSGY----GWAVKDKAFHGREHILDRA-----TPERLIGLT 283 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243 P G P+L + +G + A+A+ R Sbjct: 284 LDKVPPREGYPVLLNGEVVGRVTSGTTSPTLKRPIAMALVR 324 >gi|322368942|ref|ZP_08043509.1| glycine cleavage system aminomethyltransferase T [Haladaptatus paucihalophilus DX253] gi|320551673|gb|EFW93320.1| glycine cleavage system aminomethyltransferase T [Haladaptatus paucihalophilus DX253] Length = 365 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 51/290 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ I+V G A +Q + T DV L ++ + I G I+ ++ ++ ED Sbjct: 51 SHMGEIEVSGPDAERLMQRLTTNDVTQLSPGDSQYAMITDEDGVIIDDTVVYRLSEDDDA 110 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERF 120 F+ + + + D+ ++ ++ EI + + + + DE Sbjct: 111 EFLFIPNAGHDEMMHDRWKRFRSEWDMDAEIRNATDDYAMYAVQGPDAADAVNEAADESV 170 Query: 121 SI--------ADVLLHRTW----------GHNEKIASDIKT--YHE-------------L 147 + A V R W G + SD + L Sbjct: 171 ADLSKFEAMYASVAGVRCWVARTGYTGEDGFELILPSDEAETVWDAFDCQPCGLGARDTL 230 Query: 148 RINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R G + DF P++A + + ++G++ + R++ + Sbjct: 231 RTEMGYLLSGQDFDYEDDPRNPYEAKVGFTVKLDTE---FVGRDALERVKEEGVEETFVG 287 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVD 248 +P G I + +D IGT+ L D D Sbjct: 288 FRLVDRGVPRHGYDITSTEDTIIGTVTSGTMSPTLSEPIGLGYVPTDYAD 337 >gi|255534670|ref|YP_003095041.1| glycine cleavage system aminomethyltransferase T [Flavobacteriaceae bacterium 3519-10] gi|255340866|gb|ACU06979.1| Aminomethyltransferase (glycine cleavage system T protein) [Flavobacteriaceae bacterium 3519-10] Length = 359 Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 90/304 (29%), Gaps = 53/304 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A LQ + T +V +L A+ + + G I+ +I K+ ++ + + ++ S Sbjct: 56 VEGPTAKDLLQYVTTNNVDSLETGKAQYTCLPNGNGGIVDDLIIYKMSDEKYFVVVNASN 115 Query: 74 RDSLIDKLLFY--KLRSNVI--------IEIQPINGV---------------VLSWNQEH 108 + + + Y K + + I +Q + Q Sbjct: 116 IEKDWNHITKYNEKFGAKLTNVSDELSLIAVQGPKASETLQKLTETNLAELPYYHFTQGS 175 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINH 151 S + I + NE + + LR+ Sbjct: 176 VASVADVIISNTGYTGSGGFEIYFKNENAVAIWEALTAAGEKFGLLPCGLAARDTLRLEK 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D T P +A + + K ++ +E ++ + + RK Sbjct: 236 GFCLYGNDI-DDTTSPLEAGLGWI--TKFDKD-FVDKEFFAKQKEEGVTRKLVGFEMQER 291 Query: 212 DLPPSG-SPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P G + + + EIGT+ L + + + + V Sbjct: 292 AIPRHGYAVVDAEGNEIGTVTSGTMSPMKNIGIGLGYVAKSHLKVGSEIFIKIRNKNVPA 351 Query: 265 KASF 268 + Sbjct: 352 QVVK 355 >gi|193214226|ref|YP_001995425.1| glycine cleavage system T protein [Chloroherpeton thalassium ATCC 35110] gi|238692698|sp|B3QV24|GCST_CHLT3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|193087703|gb|ACF12978.1| glycine cleavage system T protein [Chloroherpeton thalassium ATCC 35110] Length = 362 Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V GK A FLQ + T DV +L A+ S +L G ++ L+ KI ++ + Sbjct: 49 SHMGEFEVKGKGAKAFLQNMTTNDVESLCDGKAQYSLLLYEDGGVVDDLLVYKIADEHYF 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 L ++ S + D L ++ V++E + +++ + Sbjct: 109 LIVNASNIEKDFDWLKQHQPDDEVVLENRSDELSLIAIQGPKAEA 153 >gi|323345580|ref|ZP_08085803.1| aminomethyltransferase [Prevotella oralis ATCC 33269] gi|323093694|gb|EFZ36272.1| aminomethyltransferase [Prevotella oralis ATCC 33269] Length = 363 Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 43/273 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A ++ I T D+ P +L G + L+ K+ E+ F Sbjct: 51 SHMGEVYVTGIDAERYVNHIFTNDITNAPIGKVFYGMMLYADGGTVDDLLVYKMTENEFF 110 Query: 67 LEIDRSKR--------------DSLIDKLLFY----KLR---SNVIIEIQ---PINGVVL 102 + I+ + D ID Y ++ + ++E P + Sbjct: 111 IVINAANIGKDVDWMRENAEGFDVAIDHCSDYYGQLAVQGPEAEAVVEEVLSIPCKELAF 170 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------------ASDIKTYHELR 148 + + I R +G + I + LR Sbjct: 171 YTAKTLELEGETVIISRTGYTGEDGFEIYGSHSFIRNQWDKLMASNRCKPCGLGCRDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + P A + + L K +IG+E + + + + +K + Sbjct: 231 FEVGLPLYGNELSEGIS-PVMAGLSMFC--KLDKEEFIGKEALIKQKTHGVDKKLVGLAL 287 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 +P G ++ D ++G + G + +++ Sbjct: 288 EDRAVPRHGYAVMKDGKQVGIITT--GYRGISV 318 >gi|51893060|ref|YP_075751.1| glycine cleavage system protein T [Symbiobacterium thermophilum IAM 14863] gi|59797718|sp|Q67N36|GCST_SYMTH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|51856749|dbj|BAD40907.1| glycine cleavage system protein T [Symbiobacterium thermophilum IAM 14863] Length = 375 Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 104/317 (32%), Gaps = 61/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ +Q + T D L + + + G ++ LI +++E + Sbjct: 53 SHMGEFEVRGPQALDLIQLVSTNDAAKLAVGRVQYALMCYENGTVVDDILIYRLDEHRYW 112 Query: 67 LEIDRSKRD-------SLIDKLLFYKL----RSNVIIEIQPIN-------------GVVL 102 L ++ + ++ + L RS I + + GVVL Sbjct: 113 LVVNAGNTQKDWEWINTARERAGLHNLELIDRS-AEIALLALQGPKAEEILQPLATGVVL 171 Query: 103 SWNQEHTFSNS-------SFIDERFSIADVLLHRTWGHNEKIASDIKTY----------- 144 S + + + + + + R + E +A+ + Sbjct: 172 SQLEPFSLAKNVTVSGVPTLVLSRTGYTGEDGFEIYVKAEDVAALWEALLEAGDEQGLLP 231 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 LR + + P +A + + L KG +IG++ ++RI+ + Sbjct: 232 CGLGARDTLRFEAKLPLYGHEISDQH-NPLEAGLGF--AVKLKKGVDFIGRDALARIKEQ 288 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAI 251 RK I +P G P+ +G + ALA + A+ Sbjct: 289 GPTRKLVGIEMIDRGVPRQGYPVAVGGEVVGEVTTGSFSPTLEKNIALAYVPV--AHSAV 346 Query: 252 KKGMALTVHGVRVKASF 268 + + + G +KA Sbjct: 347 GTEVEVIIRGRALKARV 363 >gi|300855594|ref|YP_003780578.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528] gi|300435709|gb|ADK15476.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528] Length = 368 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 99/301 (32%), Gaps = 49/301 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK A+ F+Q +IT D + + + P+G I+ L+ K + F L I+ + Sbjct: 59 ITGKDALEFVQNLITNDAAKIKENQILYTPMCYPEGGIVDDILVYKFTNEHFFLVINAAN 118 Query: 74 RDSLIDKLLF----YKLRSN------VIIEIQPINGVVLSWNQEHTFSNS---------- 113 D ID + +++ + + IQ N + T +S Sbjct: 119 TDKDIDWMKKNKENFQVDIKNISPSIIQLAIQGPNAQKILQKLTDTDLDSIKFYFFKKDV 178 Query: 114 SFIDER--FSIADVLLHRTWGHNEKIASDIKTYHE--------------------LRINH 151 +R S + + + + + LR Sbjct: 179 LVAGKRCMVSRTGYTGEDGFEIYSETENAEYLWDKILETGKEDGIKPIGLGARDTLRFEV 238 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + + +I P +A + + + L K +IG++ + + + + RK Sbjct: 239 SLPLYGNEL-SKSITPLEAGIGIF--VKLDKDNFIGKDALVKQKKEGLKRKIVGFEMKER 295 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKAS 267 + G + ++ +IG + +L A ID I +++ V + A Sbjct: 296 GISRHGYEVFAENKKIGEVTTGYRSPSLNKNIGFALIDSKYAPIGTSISIKVRNKLLNAE 355 Query: 268 F 268 Sbjct: 356 V 356 >gi|313633367|gb|EFS00208.1| glycine cleavage system T protein [Listeria seeligeri FSL N1-067] Length = 362 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 101/311 (32%), Gaps = 47/311 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111 Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102 L ++ + + + + Y + V+ ++ I+ Sbjct: 112 LVVNAANTEKDYEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKVLTKLTDIDLSSISFF 171 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149 + ++ + I R + ++ + + LR+ Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 232 EAVLALYGQEL-SQEITPLEAGLNF--AVKLNKEADFIGKEALVKQKEAGLTRKLVGIEL 288 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262 +P + D +IG + LA+ + + + + + Sbjct: 289 IERGIPRHDYSVFQKDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348 Query: 263 RVKASFPHWYK 273 + K +YK Sbjct: 349 KAKVIATPFYK 359 >gi|307108946|gb|EFN57185.1| hypothetical protein CHLNCDRAFT_30552 [Chlorella variabilis] Length = 418 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 58/302 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK A+PFL+ ++ D+ L S +G I+ +++K++ D + ++ Sbjct: 101 LTLKGKDAVPFLEGLVVGDIAALADGTGTLSVFTNEKGGIIDDTVVTKVKGDELYIVVNA 160 Query: 72 SKRDSLIDKLLFY--KLRSN---VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 R+ + + + ++ V + + ++ E F+ E Sbjct: 161 GCREKDLAHIGKHLEAFKAKGGQVDLVLHDDRSLLALQGPEAVAVLQQFVGEDLDKVYFS 220 Query: 123 --------------------------ADVLLHRTWGHNEKIASD-------IKTYHELRI 149 + RT E + D + LR+ Sbjct: 221 NFRKLDIKGVPCFLTRTGYTGEDGFELSIPSDRTVELTEALMGDRRVRLCGLGPRDSLRL 280 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL------NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ D I P +A + G I Q++ + +R Sbjct: 281 EAGLCLYGNDL-NEDITPIEAGLTWTVGKRRREAFDFLGGQVIKQQLAD-----GVSVRR 334 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259 ++ + TD ++G + L A+ +DK + + V Sbjct: 335 VGFVSSGAPARQHSEVLTTDGKKVGEITSGAFSPCLKKNIAMGYVDKSMAKAGTELKVNV 394 Query: 260 HG 261 G Sbjct: 395 RG 396 >gi|297623317|ref|YP_003704751.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093] gi|297164497|gb|ADI14208.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093] Length = 362 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 92/307 (29%), Gaps = 60/307 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A FL+ D L + + S + +G ++ + + + F+ Sbjct: 50 SHMGEVRVTGPGAEAFLRYATLNDPSRLKPQQGQYSMLPNDRGGLIDDLYVYRDAPEAFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108 + + + R++++ L + + + +L+ Sbjct: 110 IVCNAANREAVVAHLTRLSYDYDATVTDESDAWALLALQGPGAALLAGRHAEAELTALKK 169 Query: 109 ------TFSNSSFIDERFSIADV-------------LLHRTWGHNEKIASDIKTYHELRI 149 T + + R L R + LR+ Sbjct: 170 NRTLQTTLAGCAVTLARTGYTGEDGFEIFCRPEDAPTLWRALVGAGATPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-----------SRIQHRN 198 G + P T P + + + G+E + R++ R Sbjct: 230 EAGFPLFGHELGPET-NPRCTDFAWV----VKDKPFFGREAMWHRTCTRRLVGLRLKQRG 284 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKG 254 + R ++ G D+ + S + ++G + + +A+A + + Sbjct: 285 VARPGYRVLAGAADVLEAESD---EGTKVGEVTSGTISPLTREGIAMAWVRRAYSEPGTE 341 Query: 255 MALTVHG 261 +A+ + G Sbjct: 342 LAVEIRG 348 >gi|289547956|ref|YP_003472944.1| glycine cleavage system protein T [Thermocrinis albus DSM 14484] gi|289181573|gb|ADC88817.1| glycine cleavage system T protein [Thermocrinis albus DSM 14484] Length = 343 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 114/290 (39%), Gaps = 53/290 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK+++ L+ + T V L + + I P+G I I +++ED F+ Sbjct: 49 SHMGRLYVKGKNSLVLLEKLTTRQVEKLRVGKVQYNLISNPEGGIKDDVTIYRLDEDVFM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 + ++ R+ +++ S +E++ + + + S+ Sbjct: 109 ICVNAINREKIVNW------FSQNQLEVEDVTEKTVQIALQGKTSSQILSKFFPIDDIRY 162 Query: 113 ------SSFIDERFSIADVLLHRTWGHNE---KIASDIKTY---------HELRINHGIV 154 SF+ R + E ++ S++ + LRI G+V Sbjct: 163 YHFKVVDSFLVSRTGYTGEDGFEIYAPVEEGKELWSELVKWCPPCGLGARDVLRIEAGLV 222 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213 + TI P +A ++ +S K +IG+E + +R+R + + Sbjct: 223 LYGHEI-SETISPLEAGLER--YVSFQKE-FIGKEAML----SKEVRRRLYGLKLLQKGV 274 Query: 214 PPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 P GS I D EIG + V + +A+A +DK +K+G+ + V Sbjct: 275 PREGSRIFLDGKEIGVVSSGSFSPVLNRGIALAFVDK--EFLKEGLRVKV 322 >gi|315647597|ref|ZP_07900699.1| glycine cleavage system T protein [Paenibacillus vortex V453] gi|315277036|gb|EFU40377.1| glycine cleavage system T protein [Paenibacillus vortex V453] Length = 262 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A F+Q + T DV L A+ + + G + L+ K+ D F+L ++ S Sbjct: 60 VTGADAEAFIQKMTTNDVTRLSAGQAQYTLMCYDNGGTVDDLLVYKLSADQFMLVVNASN 119 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 D + L + L +VII +++ Sbjct: 120 IDKDLQWLQDH-LAGDVIIRNVSAETALIAIQGPDA 154 >gi|124025069|ref|YP_001014185.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str. NATL1A] gi|123960137|gb|ABM74920.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus str. NATL1A] Length = 282 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 40/279 (14%) Query: 12 IKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEED--TFILE 68 + + G+ FL TADV L+ +G L L ++ +D ++ Sbjct: 16 LLLKGQGTTSFLHGQTTADVFAQKELDRIFMCCWLSTKG-FLKALLEIRLSDDMAEIVII 74 Query: 69 IDR--SKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 S RD + V +E I PI ++ +N+S+ + FS Sbjct: 75 CGEINSIRDGFES-----VIFPADKVKLEVIDPIR------RRQEINNNNSWKESDFSWI 123 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 D G + + + +I GI + + P++ + + I+L KG Sbjct: 124 DKNNFSIDGITKYKKATKEELEGWKIRQGIPSFDKEM-NGETNPYELGLA--DTINLDKG 180 Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDD------IEIGTLGVVVG 235 CY+GQE +++ ++ R G +D G + +G + + Sbjct: 181 CYLGQEAMAKFFRSKSLKYQLRYWEAYGANDNFQIGKKFFNTNKNEGYKKNVGVVTSSIR 240 Query: 236 K-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269 LA+ + + + +G + P Sbjct: 241 VDDNFFNGLALIK----KTFLDHDFCFSENGDSITIKKP 275 >gi|223043146|ref|ZP_03613193.1| glycine cleavage system T protein [Staphylococcus capitis SK14] gi|222443357|gb|EEE49455.1| glycine cleavage system T protein [Staphylococcus capitis SK14] Length = 363 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 110/310 (35%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ E+ F+ Sbjct: 53 SHMGEIEITGNEAFNFVQYILSNDANNLTDTKAMYTALCNEEGGIIDDLVTYKLAENHFL 112 Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLR------SNVIIEIQPI 97 L ++ + D + + Y K R ++V + + Sbjct: 113 LIVNAANTDKDFNWISKQSSNFDVNVNNSSNIYGQLAIQGPKARHLVNEHTDVDVSDMSM 172 Query: 98 NGV---VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ S S + E S V + + + + LR Sbjct: 173 FEFKQDVKFFDKNIILSQSGYTGEDGFEIYCKSEDTVDIWNQLLEYDVVPCGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + ++ Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEEFIGKSVLKDQKENGSTKRT 285 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G + + IG + K++A+A I++ + K + + Sbjct: 286 VGLEIIGKGIARTGYEVFDLEGNHIGEVTSGTQSPSSGKSIALAIINRDAFEMGKEVLIQ 345 Query: 259 VHGVRVKASF 268 V +VKA Sbjct: 346 VRKRQVKAKI 355 >gi|170290799|ref|YP_001737615.1| glycine cleavage system T protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174879|gb|ACB07932.1| glycine cleavage system T protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 372 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 61/312 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A FLQ + +V + ++ + L +G I + ++ ++ +I Sbjct: 49 SHMGRFIIEGTDASNFLQRATSNNVD-VEIGRSKYTLTLNERGGIRDDNVAFRLSDNKYI 107 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEHT------------- 109 ++ + R ++ F +LR V I+ + + + Sbjct: 108 FVVNAANRIKILSW--FDELRKKWDMNVRIDDVTLETFMFAIQGPRAREIFHNITGTQLK 165 Query: 110 ----------FSNSSFIDERFSIADVLLHRTWGHNEKIASDI--------------KTYH 145 + I R + + ++ASD+ Sbjct: 166 IKKFNITTVNWRGEELIVSRTGYTGEDGYEVIMRDRELASDLFRSLVGAGAKPCGLVARD 225 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+V D P +A ++ + L K ++G+ ++ +R + R R Sbjct: 226 ILRLEAGLVLYGNDI-DEDTNPIEAGLEF--AVDLEKD-FVGKGAITEAINRGVERVRVG 281 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTV 259 I++ T P G + + IG + + +A + + + G LTV Sbjct: 282 IMSSTRSAPRRGEGVYMGEERIGIVTSGTFSPTIERGIGMAYIKKEYAE----IGKELTV 337 Query: 260 HG---VRVKASF 268 ++V+ Sbjct: 338 GEERKLKVRVEK 349 >gi|16331260|ref|NP_441988.1| glycine cleavage system aminomethyltransferase T [Synechocystis sp. PCC 6803] gi|1707879|sp|P54261|GCST_SYNY3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|1001434|dbj|BAA10058.1| aminomethyltransferase [Synechocystis sp. PCC 6803] Length = 372 Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 104/307 (33%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ + G+ + LQ+++ +D+ L A+ + +L QG I+ ++ Sbjct: 55 SHMGKFVLTGQKVLAALQSLVPSDLDRLTPGKAQYTVLLNAQGGIIDDIIVYDQGKNPEG 114 Query: 62 EDTFILEIDRSK----RDSLIDKL----LFYKL-RSNVIIEIQPINGVV----------- 101 ++ L ++ + + L++ L F L R V+I +Q + Sbjct: 115 QERVTLIVNAATTVKDKQWLLEHLPEEIDFQDLSREKVLIALQGPEALTILQPLVDQNLG 174 Query: 102 ---LSWNQEHTFSNSSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYH 145 + E F R L +T+G + Sbjct: 175 ELPAFGHLEAEFLREKAFIARTGYTGEDGFEIMVSPEVGKQLWQTFGSKGVTPCGLGARD 234 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D P +A + L + +KG +IG+ V++ + + ++ Sbjct: 235 TLRLEAGMGLYGQDM-NDETTPLEAGLGWLVHLD-SKGDFIGRAVLTEQKANGVEKRLVG 292 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID--KVDHAIKKGMAL 257 + + PIL + +G + AL + KV ++ + Sbjct: 293 LEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPTELAKVGQELEVEVRG 352 Query: 258 TVHGVRV 264 +G++V Sbjct: 353 KTYGIKV 359 >gi|123967836|ref|YP_001008694.1| aminomethyltransferase [Prochlorococcus marinus str. AS9601] gi|123197946|gb|ABM69587.1| Predicted aminomethyltransferase [Prochlorococcus marinus str. AS9601] Length = 278 Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 99/250 (39%), Gaps = 22/250 (8%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70 + GK A FL I T ++L + LTP G + L+ + + + IL + Sbjct: 17 SITGKDARKFLNGITTGNILN-TENKVIKTCWLTPNGVLRSLIEIVFLERGLEVIILVGN 75 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 ++ ++++F +V++ + + ++ ++ I + + +++ Sbjct: 76 TNEIIDYFNQIIFPA--DDVLLGEPSLINRIQEIDESSSWRTYQPIFFKIEDKEFEIYKN 133 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 N +D+K + +IN I + P + + L I KGCY+GQE Sbjct: 134 -KLNLLNPNDLKLW---KINQAIPSLEMEI-NGKNNPLELGLQDL--IDFNKGCYLGQET 186 Query: 191 VSRIQHRNIIRKRPMIITGTD-----DLPPSGSPILTD-DIEIGTLG----VVVGKKALA 240 +S+I++ + +++ I + DL I + DI +G + K LA Sbjct: 187 MSKIKNVSSLKQEIRIWKSIESNLNLDLKDKNLYINSAKDISVGKITSFFKSDCETKGLA 246 Query: 241 IARIDKVDHA 250 + + + Sbjct: 247 MIKRKYLKEE 256 >gi|314933710|ref|ZP_07841075.1| glycine cleavage system T protein [Staphylococcus caprae C87] gi|313653860|gb|EFS17617.1| glycine cleavage system T protein [Staphylococcus caprae C87] Length = 376 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ E+ F+ Sbjct: 66 SHMGEIEITGNEAFNFVQYILSNDANNLTDTKAMYTALCNEEGGIIDDLVTYKLAENHFL 125 Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLR------SNVIIEIQPI 97 L ++ + D + + Y K R ++V + + Sbjct: 126 LIVNAANTDKDFNWISKQSSNFDVNVNNSSNIYGQLAIQGPKARHLVNEHTDVDVSDMSM 185 Query: 98 NGV---VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148 V +++ S S + E S + + + + LR Sbjct: 186 FEFKQDVKFFDKNIILSQSGYTGEDGFEIYCKSEDTADIWNQLLEYDVVPCGLGARDTLR 245 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203 + G+ D +I P++ GI+ + +IG+ V+ + ++ Sbjct: 246 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEEFIGKSVLKDQKENGSTKRT 298 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 + + +G + + IG + K++A+A I++ + K + + Sbjct: 299 VGLEIIGKGIARTGYEVFDLEGNHIGEVTSGTQSPSSGKSIALAIINRDAFEMGKEVLIQ 358 Query: 259 VHGVRVKASF 268 V +VKA Sbjct: 359 VRKRQVKAKI 368 >gi|242398651|ref|YP_002994075.1| Probable aminomethyltransferase [Thermococcus sibiricus MM 739] gi|242265044|gb|ACS89726.1| Probable aminomethyltransferase [Thermococcus sibiricus MM 739] Length = 397 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 102/340 (30%), Gaps = 76/340 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ FLQ + T D+ P S +L +G + L+ + DT++ Sbjct: 49 SHMGEVFFKGKDALKFLQYVTTNDISRPPAISGTYSLVLNERGAVKDETLVFNMGNDTYM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-------NVIIEIQPINGVVLSWNQEHTFSNS------ 113 + D + L K R+ ++ IE + + V+ S + Sbjct: 109 MVCDSDAFEKLYAWFTSIK-RAIEQYTELDLEIENKTYDYVMFSIQGPKAKDLAMELFGI 167 Query: 114 ------SFIDERFSIADV--LLHRTWGHNEK----IASDIKTYHELRINHG--------- 152 F + + + LL R+ E D+ YH HG Sbjct: 168 DINQLWWFQAKEVELDGIKMLLSRSGYTGENGFEVYFEDVNPYHPDESKHGKPEKALYVW 227 Query: 153 --IVDPNTDFLPS-------TIFPHDALMDLLN-------------------------GI 178 I++ + +A L I Sbjct: 228 EKILEAGQKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEFAI 287 Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV---- 234 K +IG+E + + + R + K +P +G + D EIG + Sbjct: 288 FWDKE-FIGKEALLKQKERGLPSKMVHFKMVDRGVPRAGYKVYADGKEIGEVTSGTLSPL 346 Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +A + + ++ + + + P +Y Sbjct: 347 LGIGIGVAFVKPEYAKPGVEIEIEVREQKKKALTVAPPFY 386 >gi|159039088|ref|YP_001538341.1| glycine cleavage system aminomethyltransferase T [Salinispora arenicola CNS-205] gi|157917923|gb|ABV99350.1| glycine cleavage system T protein [Salinispora arenicola CNS-205] Length = 374 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 87/296 (29%), Gaps = 47/296 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ +V G A F+ A ++ D+ + A+ + G ++ + +D Sbjct: 63 SHLGKTRVTGPGAAEFVNACLSNDLTRIGPGRAQYTLCCDDATGGVVDDIIAYLYADDHV 122 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106 L + + ++ +L S V I + +L+ Sbjct: 123 FLVPNAANTAEVVRRLRAAAPPS-VTITDEHEAYAILAVQGPRSADLLDALGVPTGHDYM 181 Query: 107 ---EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTYHELR 148 T + ++ R L + E A + LR Sbjct: 182 SFAPGTVAGANLTVCRTGYTGELGYELILPAAGAVPVWDALFATATELRACGLAARDTLR 241 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G D P I P A + K + G+ + + R+ ++ Sbjct: 242 TEMGYPLHGQDLSPD-ITPVQARSGW--AVGWNKPAFWGRAALLAEKSAGPRRRLRGLVA 298 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 +P G + D +G + K+ +A+A ID + + G + V Sbjct: 299 VDRAIPRPGMVVHHRDTPVGAITSGTFSPTRKQGIALALID-TEPGLDDGTEVEVD 353 >gi|78186284|ref|YP_374327.1| glycine cleavage system aminomethyltransferase T [Chlorobium luteolum DSM 273] gi|123730119|sp|Q3B5U7|GCST_PELLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|78166186|gb|ABB23284.1| Glycine cleavage system T protein [Chlorobium luteolum DSM 273] Length = 365 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 48/270 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FLQ + T D+ A+ + +L P G I+ +I +I+ TF Sbjct: 49 SHMGNFYVKGPRAEEFLQHMTTNDLSRAKNGQAQYNVMLYPNGGIVDDLIIYRIDAQTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 + ++ + L + + V++E +++ F + Sbjct: 109 IIVNAGNCEKDYQWLQEHAAEYDGVVLEDHSSAMSLIALQGPKAFDILKKVLPSLDAPSL 168 Query: 119 --------RFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF--- 160 +S A++++ RT E + + +L + G + Sbjct: 169 GSFHFCTLEYSGAELMVARTGYTGEIGVEICMPNEMALPLWEDL-LEAGRPEGILPIGLG 227 Query: 161 -----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + P +A + + + L KG +IG+E +++ Sbjct: 228 ARDTLRLEMGYSLYGHEIDQDTNPLEARLKWV--VKLDKGHFIGREACLQVELNPKRSVA 285 Query: 204 PMIITGTDDLPPSGSPILTDD-IEIGTLGV 232 ++ G LP G + D EIG + Sbjct: 286 GFVLEGR-ALPRQGCKLFNSDHQEIGRVCS 314 >gi|84498272|ref|ZP_00997069.1| putative dehydrogenase protein [Janibacter sp. HTCC2649] gi|84381772|gb|EAP97655.1| putative dehydrogenase protein [Janibacter sp. HTCC2649] Length = 822 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 90/275 (32%), Gaps = 54/275 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A LQ + TADV +P +A+L +G ++++ F++ + Sbjct: 502 VAGADAASTLQWLCTADVD-VPVGRTVYTAMLNARGTYEADVTVTRVGAQEFLVVSSAAT 560 Query: 74 RDSLIDKLLFYK-LRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSSFI----- 116 D +D + + + + V + P + +LS FS+++F Sbjct: 561 TDRDLDWMRRHAPIGAAVTVTDLTSAMAVFGVMGPRSRELLSALSPDDFSDTAFPFATSR 620 Query: 117 DERFSIADVLLHRT-----WGHNEKIASDIKTY------------------HELRINHGI 153 D R A V R G + +D+ +R+ G Sbjct: 621 DVRLGRATVRATRITYVGELGWELYVPTDLAAGVFGGVGGVEVVPAGYYAIEAMRLEKGY 680 Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIIT 208 + P +A + L I +G+E V R + R R+ +++ Sbjct: 681 RAFARELTTD-WGPVEAGLTFACKLRTSIDF-----LGREEVERAKARGPERRVASVVVA 734 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 G +L D + G + A+ R Sbjct: 735 DPTAYLWGGELVLRDGLPAGQVTSA--GWGAALGR 767 >gi|56709093|ref|YP_165138.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] gi|56680778|gb|AAV97443.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] Length = 799 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 57/278 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A FL + A + + + IL +G + + + +T+++ + Sbjct: 494 IMVQGPDACTFLNRLCAAQMD-IAEGRIAYTQILNARGGVESDLTVQRHGPETYLMIVGA 552 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----------RF 120 + + + + R + +E + + T + RF Sbjct: 553 GEVVRDMKR--MRETRGDFRVEFTDVTSGYAAIGLAGTKAREVLQATTNTPVPDLKRFRF 610 Query: 121 SIADVLLHRTW----------------------GHNEKIASDIKTYH------ELRINHG 152 + ++ L R W +E + + T+ LRI G Sbjct: 611 APVEIGLARGWAGRLSFTGEEGYELYVPSDMAMAAHEALVAAGATHAGLFASGSLRIESG 670 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + P T P +A + G ++GQ ++ ++R + + D Sbjct: 671 FRAFGHELTPGTT-PQEAGLGAFCA--FGTG-FVGQGALANA---GSPKRRVVSLLFDDP 723 Query: 213 --LPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 +P PI D +G + ALA+ Sbjct: 724 NAMPIHDEPIYYDGRVVGQITSAAWSYRFGRSVALAMI 761 >gi|254410465|ref|ZP_05024244.1| glycine cleavage system T protein [Microcoleus chthonoplastes PCC 7420] gi|196182671|gb|EDX77656.1| glycine cleavage system T protein [Microcoleus chthonoplastes PCC 7420] Length = 374 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 54/269 (20%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT------------------ 64 LQ ++ +D+ L A+ + +L PQG I+ ++ ED Sbjct: 72 LQRLVPSDLSRLQPGQAQYTVLLNPQGGIIDDVIVYHKGEDETGESQAMMIVNAATCQKD 131 Query: 65 ----------------------FILEIDRSKRDS-----LIDKLLFYKLRSNVIIEIQPI 97 ++ + S+ ++ + + L K ++ I Sbjct: 132 KEWLLAQLENTEVKLLDLSQENILIALQGSQAETYLQPFVQEDLTSLKSFGHLNATILDQ 191 Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 G + + V L R + LR+ G+ Sbjct: 192 PGFIARTGYTGEDGFEVMVKPE---VGVQLWRRLFQAGVTPCGLGARDTLRLEAGLALYG 248 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 D T P +A + L + KG +IG+ V+ + + R+ I + G Sbjct: 249 QDI-DDTTTPLEAGLSWLVHLD-RKGDFIGRSVLEAQKANGVERRLVGIEMQGRHIARHG 306 Query: 218 SPILTDDIEIGTLGVVVG----KKALAIA 242 +L++ +G + +A+A+A Sbjct: 307 YSVLSEGQVVGEITSGTYSPTLGRAIALA 335 >gi|114706121|ref|ZP_01439024.1| putative aminomethyltransferase protein [Fulvimarina pelagi HTCC2506] gi|114538967|gb|EAU42088.1| putative aminomethyltransferase protein [Fulvimarina pelagi HTCC2506] Length = 790 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 62/310 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G + LQ +T D+ L SA+ P G ++ + ++ E+ F Sbjct: 457 LSALRKFEVTGPDSERLLQHCLTRDMKRLSIGQVAYSAMCYPHGGMVDDGTVFRLGENNF 516 Query: 66 ILEIDRS--------KRDSLIDKL---------LFYKL-----RSNVIIE---------- 93 + ++L KL + + RS I+E Sbjct: 517 RWICGSDASGIWLREQAEAL--KLDVWVRSSTDQMHNIAVQGPRSRDILEKFVWTSPTQP 574 Query: 94 -IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------- 139 +Q + + + TF + R L + + H + Sbjct: 575 TLQELGVFRFTIGRLETFDGRPIVVSRTGYTGELGYEIFCHPTDAEAVFDAVWEAGKPFE 634 Query: 140 ----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 ++ +RI G+V +F T P +A + + ++G+ V+ + Sbjct: 635 LTPFGLEALDMVRIEAGLVFAGYEFCDQT-NPLEAGIGFTVPLKSKPDDFVGRSVLE--E 691 Query: 196 HRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 + ++ + + L PS G+ + ++G + V K +A+ RID Sbjct: 692 RKAHPNRQLVGLDLDGSLVPSHGACVRIGQAQVGEITSAVRSPILGKVIALCRIDATHAE 751 Query: 251 IKKGMALTVH 260 + G + V Sbjct: 752 V--GTEVEVG 759 >gi|27366646|ref|NP_762173.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6] gi|27358212|gb|AAO07163.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6] Length = 381 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 103/311 (33%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL++++ D+ L R + QG I+ +++ + D Sbjct: 63 SHMGQLRLHGAGAAAFLESLVPVDIADLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + ++ I+ L + + S+V +EI ++ + S F + Sbjct: 122 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 180 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L E + LR+ Sbjct: 181 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 240 Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204 G+ D T P +A + + +G + G +++ + I+ +++ RKR Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 299 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257 ++ T G+ + ++G + ++A R D + + + Sbjct: 300 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 359 Query: 258 TVHGVRVKASF 268 + + Sbjct: 360 RGKLLPMTVEK 370 >gi|37676356|ref|NP_936752.1| glycine cleavage system T protein [Vibrio vulnificus YJ016] gi|37200898|dbj|BAC96722.1| glycine cleavage system T protein [Vibrio vulnificus YJ016] Length = 381 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 104/311 (33%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL++++ D++ L R + QG I+ +++ + D Sbjct: 63 SHMGQLRLHGAGAAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + ++ I+ L + + S+V +EI ++ + S F + Sbjct: 122 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 180 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L E + LR+ Sbjct: 181 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 240 Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204 G+ D T P +A + + +G + G +++ + I+ +++ RKR Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 299 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257 ++ T G+ + ++G + ++A R D + + + Sbjct: 300 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 359 Query: 258 TVHGVRVKASF 268 + + Sbjct: 360 RGKLLPMTVEK 370 >gi|84685725|ref|ZP_01013622.1| sarcosine dehydrogenase [Maritimibacter alkaliphilus HTCC2654] gi|84666391|gb|EAQ12864.1| sarcosine dehydrogenase [Rhodobacterales bacterium HTCC2654] Length = 815 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 48/279 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A+ FLQ + D+ + + +L +G I ++++ E F Sbjct: 489 MTSFGKIRVEGRDALAFLQRLCANDMD-VAVGRIVYTQMLNGRGGIECDLTVTRLSETVF 547 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 L + + + L + V I + V+ N Sbjct: 548 FLVVPGATLQRDLVWLRRHLGDEWVTITDVTASEAVIPIMGPRARDLLARVSPNDLSNDA 607 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142 H F + R + L + ++ A + Sbjct: 608 HPFGMAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEAIAEAGADVGLKLCGLH 667 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D +A + + KG +IG++ V + + R+ Sbjct: 668 AMDSCRIEKGFRHFGHDITDEDHV-LEAGLGF--AVKTDKGDFIGRDAVLSKREAGLDRR 724 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 +T + L PIL D + L AL Sbjct: 725 MLQFKLTDPEPLLFHNEPILRDGKIVSFLTSGNYGHALG 763 >gi|289208881|ref|YP_003460947.1| glycine cleavage system protein T [Thioalkalivibrio sp. K90mix] gi|288944512|gb|ADC72211.1| glycine cleavage system T protein [Thioalkalivibrio sp. K90mix] Length = 365 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 92/302 (30%), Gaps = 40/302 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A FL+ ++ DV L A S +L G ++ +I D++ Sbjct: 51 SHMQVVDIHGPQAQAFLRYLLANDVAKLKTEGRALYSCMLNEAGGVIDDLIIYWTGGDSY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++ + + I + + +E +P ++ + + E A Sbjct: 111 RAVVNAATAEGDIAHMQQVVKGFDANVEPRPEFALIAIQGPQAVEKTLPLLPEDLRSAGD 170 Query: 126 LLHRTWGHNEKIASDIKTY-----------------------------------HELRIN 150 L + N+ Y LR+ Sbjct: 171 LKPFSAVWNDSWFVARTGYTGEDGFEVMLPEAEADGFWEQLKDAGVNPIGLGARDTLRLE 230 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ TD T P A + + + +IG++ + + + + + ++ Sbjct: 231 AGMNLYGTDMDDQT-NPLTANLGWTIALKDAERDFIGRKAIEQWKAEGVPERMVGLVLEG 289 Query: 211 DDLPPSGSPI-LTDDIEIGTLGVVVGKKA--LAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + G+ I + T G +A ARI A + + + V+ Sbjct: 290 RGVLRGGTRIETAAGDGVVTSGSFSPSLGVSVAFARIPAAVDAEELQADIRGRMLPVRVV 349 Query: 268 FP 269 P Sbjct: 350 KP 351 >gi|310799208|gb|EFQ34101.1| FAD dependent oxidoreductase [Glomerella graminicola M1.001] Length = 834 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 52/270 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ LQ + T+D+ + +L G I ++++ D F L ++ Sbjct: 505 LEVSGPGAVELLQRLTTSDISK-SPGTVTFTLLLDGHGGIRSDIFVARLGNDLFQLAVNG 563 Query: 72 SKRDSLIDK----------LLFYKLR----------------SNVIIEIQ---------- 95 + + + F ++R ++VI I Sbjct: 564 PVDFAYLSREARIQAEASPAKFVQVRDTTGGSGGIGLWGPRAADVIGGISSDNLKDMPPS 623 Query: 96 ----------PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 P+ V LS+ E + + + + D L + + IA+ + Sbjct: 624 RVKSAIIAGIPVTVVSLSFVGEPGWEIYTSAENSLRLWD-TLWQAGKPHGVIAAGRAAFS 682 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204 LR+ G D + S P +A ++ + + K Y+G + + R+ + R+ R Sbjct: 683 ALRLETGFRTYGAD-VTSEHNPFEAGLE--SAVDPEKQGYVGHDAIKRLSKEKVSRRLRC 739 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + I + P+ D +G + Sbjct: 740 LTIDDGRSVVLGKEPVFLDGKAVGYVTTAA 769 >gi|153005382|ref|YP_001379707.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter sp. Fw109-5] gi|152028955|gb|ABS26723.1| glycine cleavage system T protein [Anaeromyxobacter sp. Fw109-5] Length = 360 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 60/312 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ L + T D+ + A+ + G I+ ++ + D + Sbjct: 50 SHMGEVVFRGPRALEALSRLFTNDLSKVADGQAQYGCLCRESGGIVDDVVVYRRAADDLL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 + ++ + R + L + + + + L+ ++ + +R + AD+ Sbjct: 110 VCVNAANRQKDHEWLAGHA--AGADVRNESDEWAQLALQG----PLAARVLQRLTSADLP 163 Query: 127 LHRTWGHNE-------------------------KIASDIKTYHELRINHGIVDP----- 156 RT+ + + + + ++ G + Sbjct: 164 AIRTYRFARGEVAGVPCLIARTGYTGEDGFELFCPPDAAARLWDAV-VDSGEPEGLQPCG 222 Query: 157 ----------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 +D T P +A + + + L KG ++G++ + R + + + Sbjct: 223 LGARDSLRLEMAYRLYGSDMDDGTT-PLEAGLGWV--VKLDKGEFVGRDALVRQKEQGLA 279 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256 RK + + G P++ D ++G + +L +A + A A Sbjct: 280 RKLVGFVLTDPGIARHGYPVVQDGRKVGEVTSGTRSPSLGTSIGLAYVPPALAAEGSTFA 339 Query: 257 LTVHGVRVKASF 268 + + G A Sbjct: 340 VEIRGRPAAAKV 351 >gi|292656530|ref|YP_003536427.1| glycine cleavage system protein T [Haloferax volcanii DS2] gi|291370158|gb|ADE02385.1| aminomethyltransferase (glycine cleavage system protein T) [Haloferax volcanii DS2] Length = 363 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 52/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---IEED 63 S+ S I+V G A +Q + T DV L ++ SAI+ +G I+ ++ + +E Sbjct: 51 SHMSEIEVSGPDATALMQRLTTNDVTALEPGDSQYSAIVNDEGVIVDDTVVYRLPDRDER 110 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 ++ + + + D+ ++ + +E + + + + + + Sbjct: 111 VYLFVPNAGHDEEMYDRWTSFRDDWDLDATVEDVTEDWAMFAVQGPDALDSVTDAAPDAA 170 Query: 122 IADV---------------LLHRT--------------------WGHNEKIASDIKTYHE 146 + D+ + RT W E + + Sbjct: 171 LGDLSKFQATFADVAGVECWVARTGYTGEDGFELLCPWADAETVWAALEATPCGLGSRDT 230 Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G + DF P T P++A + + + ++G++ + R + + Sbjct: 231 LRLEMGYLLSGQDFDPETEPRTPYEAGIGFVVDLDTE---FVGRDALERRREAGVEETFV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEI------GTLG-VVVGKKALAIARIDKVDHAIKKGMAL 257 +P G I D E+ GT+ + L ++ D + + + Sbjct: 288 GFALLDRGVPRHGYDIANSDGEVIGVVTSGTMSPTLSEPIGLGYVPVEYADDETEVSVLV 347 Query: 258 TVHGVRVKASFPH 270 R P Sbjct: 348 RGREKRAVIVTPP 360 >gi|288817925|ref|YP_003432272.1| aminomethyltransferase [Hydrogenobacter thermophilus TK-6] gi|288787324|dbj|BAI69071.1| aminomethyltransferase [Hydrogenobacter thermophilus TK-6] gi|308751523|gb|ADO45006.1| glycine cleavage system T protein [Hydrogenobacter thermophilus TK-6] Length = 339 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 48/297 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G SA+ L + T V L + S I QG ++ + +++++F+ Sbjct: 48 SHMGRILMKGPSALETLDYLTTNHVKKLSPGKVQYSMITNHQGGVVDDITLYMLDQESFM 107 Query: 67 LEIDRSKRDSLIDKLLFY-------------KLRSNVIIEIQPI---------------N 98 L I+ + R +I+ L Y L+ +++ + Sbjct: 108 LCINAANRKKVINWLSKYHHVEDISGSTLQLALQGKKSVDVLSALFPVGEIKRYNFKVFD 167 Query: 99 GVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 G+++S + E F + I E I L+ + LRI G+ Sbjct: 168 GIIVSRTGYTGEDGFEIYASIKEGLGIFKELIKY------AKPCGLGARDVLRIEAGLPL 221 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 + I P +A +D ++G+ S + R I RK + +P Sbjct: 222 YGHEI-SEDITPFEANLDRFVCTDKD---FLGK---SAMLKREIHRKLFGLELLQRGVPR 274 Query: 216 SGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 I D+EIG + K +A+ +D + L V G R+KA Sbjct: 275 EDYRIYLSDMEIGRVSSGTYSPTLDKGIALCFVDISFRKEGLEVELDVRGKRLKALL 331 >gi|320158537|ref|YP_004190915.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio vulnificus MO6-24/O] gi|319933849|gb|ADV88712.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio vulnificus MO6-24/O] Length = 377 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 104/311 (33%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL++++ D++ L R + QG I+ +++ + D Sbjct: 59 SHMGQLRLHGAGAAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + ++ I+ L + + S+V +EI ++ + S F + Sbjct: 118 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 176 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L E + LR+ Sbjct: 177 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204 G+ D T P +A + + +G + G +++ + I+ +++ RKR Sbjct: 237 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 295 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257 ++ T G+ + ++G + ++A R D + + + Sbjct: 296 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 355 Query: 258 TVHGVRVKASF 268 + + Sbjct: 356 RGKLLPMTVEK 366 >gi|332706646|ref|ZP_08426707.1| aminomethyltransferase [Lyngbya majuscula 3L] gi|332354530|gb|EGJ34009.1| aminomethyltransferase [Lyngbya majuscula 3L] Length = 385 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 94/286 (32%), Gaps = 50/286 (17%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFILE----IDRS 72 LQ+++ +D+ L A+ + +L P G I+ + E+ ++ + Sbjct: 81 LQSLVPSDLTRLQPGQAQYTVLLNPNGGIIDDIIFYYQGEEESGEQRGMMIVNGATCTKD 140 Query: 73 KRDSLIDKLLFYKL------RSNVIIEIQPING--------------VVLSWNQEHTFSN 112 +D L+ L + S V+I +Q V + E T Sbjct: 141 -KDWLLAHLDADSVTLQDLSTSKVLIAVQGPLAISHLQPFVKEALAPVKAFGHLEATVLG 199 Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 R + L + + LR+ + D Sbjct: 200 KPAFIARTGYTGEDGFELMLDPDVGIELWHKLLESGVTPCGLGARDTLRLEAAMALYGQD 259 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 T P +A + L + +KG +IG+ V+ + + I RK I + G P Sbjct: 260 I-DDTTTPLEAGLGWLVHLD-SKGDFIGRSVLEQQKATGIERKLVGIQMQGRQIARHGYP 317 Query: 220 ILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 +L D +G + A+A+A + + + + + + + G Sbjct: 318 VLADGEVVGVVTSGTLAPTLGNAIALAYVPRKLGKVGQQLEVEIRG 363 >gi|220917813|ref|YP_002493117.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955667|gb|ACL66051.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 360 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 46/303 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G AI L + T D+ + A+ + G I+ ++ + + + Sbjct: 50 SHMGEVVFRGPRAIAALGRLFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRSAEDLL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119 + ++ R + L + ++V E + L T + S+ R Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169 Query: 120 FSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVD-------PNTDF 160 F +V R + + + L + G+ + D Sbjct: 170 FGEGEVAGVRCIVARTGYTGEDGFELFCRSDLGPRLWDAL-MEAGVPERIAPCGLGARDS 228 Query: 161 L-------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L T P +A + + + L KG +IG+E + + + + + RK Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGDFIGREALLKQKEQGLSRKLVGFQ 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G P+L D ++G + A+ +A + A A+ + G Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGDVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346 Query: 264 VKA 266 A Sbjct: 347 AAA 349 >gi|289434629|ref|YP_003464501.1| glycine cleavage system T protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170873|emb|CBH27415.1| glycine cleavage system T protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 362 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 47/311 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111 Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102 L ++ + + + + Y + ++ ++ ++ Sbjct: 112 LVVNAANTEKDYEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKILTKLTDVDLSSISFF 171 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149 + ++ + I R + ++ + + LR+ Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 + + I P +A ++ + L K +IG+E + + + + RK I Sbjct: 232 EAVLALYGQEL-SQDITPLEAGLNF--AVKLKKEADFIGKEALVKQKEAGLTRKLVGIEL 288 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262 +P + +D +IG + LA+ + + + + + Sbjct: 289 IERGIPRHDYSVFQNDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348 Query: 263 RVKASFPHWYK 273 + K +YK Sbjct: 349 KAKVIATPFYK 359 >gi|149915485|ref|ZP_01904012.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. AzwK-3b] gi|149810774|gb|EDM70615.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. AzwK-3b] Length = 815 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 100/314 (31%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G A FL + AD+ ++P + L P+G I ++++ + + Sbjct: 490 MSSFGKLRVEGPEAEAFLNHVCGADI-SVPVGRIVYTQFLNPRGGIEADVTVTRLSDTAW 548 Query: 66 ILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ----------EHTFSNSS 114 ++ + R + L + R VI ++ V+ FSN + Sbjct: 549 LVVTPAATRLADETWLRRHLFWRMAVITDVTAAEAVLAVMGPKARDVMRAVSPDDFSNDA 608 Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144 R S L + + +T Sbjct: 609 HPFGMARQIEIGMALARAHRVSYVGELGWEIYISADMAGHVFETLIEAGADHGLKLCGMH 668 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D +A + +S TK +IG++ V+R + + + Sbjct: 669 VMDSCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVSKTKPDFIGRDAVARKRDAGLDTR 725 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIKK 253 +T D L PIL D +G L G L + + D + Sbjct: 726 MMQFRLTDPDPLLYHNEPILRDGQIVGFLSSGSYGHHLGGAIGLGYVPCKGETPDQLLAS 785 Query: 254 GMALTVHGVRVKAS 267 + V G RV+A Sbjct: 786 SYEIDVAGTRVQAE 799 >gi|15827390|ref|NP_301653.1| glycine cleavage system aminomethyltransferase T [Mycobacterium leprae TN] gi|221229867|ref|YP_002503283.1| glycine cleavage system aminomethyltransferase T [Mycobacterium leprae Br4923] gi|11132073|sp|O32955|GCST_MYCLE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797878|sp|B8ZQK6|GCST_MYCLB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|2342607|emb|CAB11378.1| aminomethyltransferase [Mycobacterium leprae] gi|13092940|emb|CAC31246.1| putative aminomethyltransferase [Mycobacterium leprae] gi|219932974|emb|CAR70960.1| putative aminomethyltransferase [Mycobacterium leprae Br4923] Length = 367 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 109/312 (34%), Gaps = 48/312 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ +++T D+ + A+ + + G ++ + +++D Sbjct: 55 SHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++D L RS+ ++ +Q V+ + Sbjct: 115 LVSNAANTAAVVDALQAVVPAGLTIINQHRSHAVLAVQGPRSTDVLGELGLPTGIDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI-----NHGIVDPNTD---------FL 161 +D ++ V + RT E+ + + + +VD + Sbjct: 175 VDASYAGVPVRVCRTGYTGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLR 234 Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITG 209 +P H+ +D+ I K ++G++ + + R+ R + + G Sbjct: 235 TEMGYPLYGHELSLDISPLQARCGWAIGWKKDAFLGRDALLAEKAAG-PRRLLRGLRMAG 293 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH----G 261 L P G + DI IG +A+A ID + A++ G + V Sbjct: 294 RGVLRP-GLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDS-EAAVQDGQQIIVDVRGRA 351 Query: 262 VRVKASFPHWYK 273 V + P + + Sbjct: 352 VECEVVRPPFIE 363 >gi|300778775|ref|ZP_07088633.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910] gi|300504285|gb|EFK35425.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910] Length = 358 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 99/313 (31%), Gaps = 54/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + LQ + T +V TL A+ S + G I+ ++ K+E+D + Sbjct: 49 SHMGQFFIEGPGSKDLLQFVTTNNVDTLENGKAQYSCLPNENGGIVDDLIVYKMEDDKYF 108 Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109 + ++ S D + + Y + + ++ + T Sbjct: 109 VVVNASNIDKDWNHISKYNTFGAKMT-NASDEMSLLAVQGPKATEILQKLTDVNLSEIPY 167 Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHE------------------ 146 F+ S E I + G E K S K + Sbjct: 168 YHFTVGSVAGENDVIISNTGYTGSGGFEIYFKNESAEKLWDAVMEAGQEEGIIPCGLAAR 227 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D T P +A + + K ++ ++V ++ + + RK Sbjct: 228 DTLRLEKGFCLYGNDI-DDTTSPIEAGLGWI--TKFDKD-FVSKDVFAKQKEEGVSRKLV 283 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 +P P++ + IG + K L +A +DK + + + V Sbjct: 284 GFELTDKGVPRHDYPVVDAEGNVIGKVTSGTQSPMKKVGLGLAYVDKPHFKLGSEIFIQV 343 Query: 260 --HGVRVKASFPH 270 + K Sbjct: 344 RNKNIPAKVVKAP 356 >gi|126695638|ref|YP_001090524.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT 9301] gi|126542681|gb|ABO16923.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT 9301] Length = 278 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 48/262 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK A FL + T++++ + LTP G + I +E + F + I Sbjct: 17 SITGKDARKFLNGLTTSNIID-SENKVIKTCWLTPNGVLRALIEIIFLERN-FEIIILAG 74 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTW 131 + +I+ I P++ V LS F+ R D RT+ Sbjct: 75 NTNEIINYFNQI---------IFPVDNVFLS---------EPFLINRIQEIDESCSWRTY 116 Query: 132 G--------------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 N+ + L+IN I + P + + L Sbjct: 117 QPIFFKTDDKEFEIYKNKLNLLNPNDLKLLKINQAIPSLGMEI-NGKNNPLELGLKDL-- 173 Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMI---ITGTDDLPPSGSPILTD---DIEIGTLG 231 I KGCY+GQE +S+I++ + +++ + +L + + DI +G + Sbjct: 174 IDFNKGCYLGQETMSKIKNVSSLKQEIRTWKSLESNLNLDVEDKNLYINSAKDISVGKIT 233 Query: 232 ----VVVGKKALAIARIDKVDH 249 K LA+ + ++ Sbjct: 234 SFFKSDSQIKGLAMIKRKYLEE 255 >gi|291534242|emb|CBL07355.1| aminomethyltransferase [Megamonas hypermegale ART12/1] Length = 365 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 103/308 (33%), Gaps = 52/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G+ A+ + +++ D L AR S + QG ++ ++ K E + Sbjct: 54 SHMGEIICEGEDALANINMLLSNDYTDLDINHARYSPMCNEQGGVVDDLIVYKQHEHKYF 113 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPI-------NGVVLSWNQEHTFSN--- 112 + ++ + +D + + S+V E + ++ E Sbjct: 114 IVVNAANKDKDFAWMKAHAFGDVKFSDVSAEYAQLALQGPKSEHILAQVTDEKNIPQKYY 173 Query: 113 SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTYH 145 + D + D ++ RT E I + Sbjct: 174 TCIFDAKIDDIDCIISRTGYTGEDGFEIYVASKYAPAIWNLLLENGKEDGLIPCGLGARD 233 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + + I P +A + + + + K +IG+ S ++ + +R + Sbjct: 234 TLRLEAAMPLYGHEM-NDEISPKEAGLGIF--VKMDKPDFIGK---SALEQKGAPTRRRV 287 Query: 206 IITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 + T + + D +IG K+A+A+A +D + + + V Sbjct: 288 GLKVTGKGIIREAQDVYIDGEKIGITTSGTHCPYLKQAVALAIVDVAHKDVGTKVQVDVR 347 Query: 261 GVRVKASF 268 G V+A Sbjct: 348 GRMVEAEI 355 >gi|110596895|ref|ZP_01385185.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM 13031] gi|110341582|gb|EAT60042.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM 13031] Length = 365 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 89/278 (32%), Gaps = 50/278 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ FLQ++ T D+ A+ + +L P G I+ +I +I+ +TF Sbjct: 49 SHMGNFYVRGKRALEFLQSVTTNDISKAKDGQAQYNLMLYPSGGIVDDLIIYRIDSETFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE------------------ 107 L ++ S L + V++E +++ Sbjct: 109 LIVNASNAPKDYAWLQEHIGAFDGVVLEDHTDRLSLIALQGPLALNILSRVFPSAEVNSL 168 Query: 108 -------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144 F+ S I R NE+ + Sbjct: 169 GSFHFCSALFNGSEAIIARTGYTGEQGVEICLSNEQAQPLWEALMEAGKEDGIQPIGLGA 228 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + P +A + + + + KG +IG+E + Q + +++ Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VKMDKGHFIGRE--ACQQVESNLQRG 283 Query: 204 PMIITGTDD-LPPSGSPILTDDI-EIGTLGVVVGKKAL 239 + LP + D EIG + L Sbjct: 284 VAGFSLEGRVLPRQHFKVYNSDRQEIGWVCSGTQSPTL 321 >gi|258405679|ref|YP_003198421.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM 5692] gi|257797906|gb|ACV68843.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM 5692] Length = 359 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 53/301 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L I+T ++ L +LTP+G + ++ ++ED F+L ++ + Sbjct: 58 RITGPGARDGLDRIVTHNLERLRPGRCSYGFLLTPEGTVQDDLIVYCLDEDDFMLVVNAA 117 Query: 73 KRDSLIDKLLFYKLRSNV----------IIEIQPINGVVL-------SWNQ-------EH 108 +++ L + L + V I++Q + +W + Sbjct: 118 CQETDFTWLREH-LPAGVAFEDISEATAKIDLQGPTSIAALERVLPGAWRELKFFGHCPS 176 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINHGIV 154 +F S R L + + E+ S + + LR+ G++ Sbjct: 177 SFGGQSLRVSRTGYTGELGYEIYLPREQAVSLWEQFLDGEDVKPAGLGARDTLRLEAGLL 236 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D P +A G+ ++ YIG++ ++ + + + G Sbjct: 237 LYGQDLDREHT-PAEAGYA---GMLTSQAPYIGKDNALTVRDKLVA----LQFEGRRTAH 288 Query: 215 PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + + +GT+ LA + D D S Sbjct: 289 HHDTVLDASGAPVGTITSASFAPSLGHAIGLAYIQADAADQDQYTVQTKRAALTATVTSL 348 Query: 269 P 269 P Sbjct: 349 P 349 >gi|84496121|ref|ZP_00994975.1| aminomethyltransferase [Janibacter sp. HTCC2649] gi|84382889|gb|EAP98770.1| aminomethyltransferase [Janibacter sp. HTCC2649] Length = 370 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 62/317 (19%) Query: 7 SNQSFIKVCG----KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ +V G SAI F+ + +T D+ + A+ + G ++ + E Sbjct: 54 SHLGKARVSGRAGDVSAIDFVNSCLTNDLRRIGPGQAQYTLCCQDDGGVVDDLIAYVRSE 113 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVI--IEIQPINGVVLSWNQEHTFSNS------- 113 D L + + +++D L R+ IE++ ++ + + S+ Sbjct: 114 DDVFLIPNAANTAAVVDLL-----RAAAPEGIEVENLHDAYAVFAVQGPKSDEVLTSLGL 168 Query: 114 -------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------------- 146 SF++ + V++ RT E+ + + Sbjct: 169 PVDHDYMSFVETEWQGLPVIVCRTGYTGERGYELVPAWDAAGSLWDALASAVADQSGMPA 228 Query: 147 -------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 LR G D I P A + K + G+E ++ + Sbjct: 229 GLGARDTLRTEMGYPLHGNDLSTE-ITPVMAGAAW--AVGWDKDTFWGKEALAEQRAAKT 285 Query: 200 IR-KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDK-VDHAIKK 253 R R +++TG +P + +L D +G + K+ +A+A++++ V + Sbjct: 286 SRLNRGLVVTGRG-IPRAHCSVLKDGEVVGEVTSGTFSPTRKEGIALAQLERSVAIGDEV 344 Query: 254 GMALTVHGVRVKASFPH 270 + + + + P Sbjct: 345 VIDVRGREIPATVTKPP 361 >gi|197123023|ref|YP_002134974.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter sp. K] gi|196172872|gb|ACG73845.1| glycine cleavage system T protein [Anaeromyxobacter sp. K] Length = 360 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 46/303 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ L + T D+ + A+ + G I+ ++ + + + Sbjct: 50 SHMGEVVFRGPRALAALGRLFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRSAEDLL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119 + ++ R + L + ++V E + L T + S+ R Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169 Query: 120 FSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVD-------PNTDF 160 F +V R + + + L + G+ + D Sbjct: 170 FGEGEVAGVRCIVARTGYTGEDGFELFCRADLGPRLWDAL-MEAGVPERIAPCGLGARDS 228 Query: 161 L-------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 L T P +A + + + L KG +IG+E + + + + + RK Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGEFIGREALLKQKEQGLSRKLVGFQ 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G P+L D ++G + A+ +A + A A+ + G Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGDVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346 Query: 264 VKA 266 A Sbjct: 347 AAA 349 >gi|160879683|ref|YP_001558651.1| glycine cleavage system T protein [Clostridium phytofermentans ISDg] gi|160428349|gb|ABX41912.1| glycine cleavage system T protein [Clostridium phytofermentans ISDg] Length = 360 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 102/308 (33%), Gaps = 54/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+ GK A+ LQ ++T D + AR S + QG + ++ K +E+ ++ Sbjct: 51 SHMGEIRCSGKDALRNLQQLLTNDFTDMSDGQARYSPMCNEQGGTVDDLIVYKKKEEEYL 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ S ++ +L +K V+ E ++ + Sbjct: 111 IVVNASNKEKDYHWMLEHK-FGEVVFEDISDKISQIALQGPKSQEILMKLSTDIPEKYYH 169 Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146 + + R + N E + K Y Sbjct: 170 AVFDGMVAGIPCMISRTGYTGEDGFELYLDNTYAKTMWETLMEAGKEYGLIPCGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ + I P + + + + K +IG++ + +++RKR + Sbjct: 230 LRLEAGMPLYGHEM-NDEINPVETGLSF--AVKMQKEDFIGKDHLP--DKDSLMRKRVGL 284 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260 + +L D ++G A+AI + + K + + V Sbjct: 285 RVTGRGIIREQEDVLVDGKKVGFTTSGTHCPYLGYPVAMAILNKEYIKVGTK--VTVIVR 342 Query: 261 GVRVKASF 268 G V+A Sbjct: 343 GREVEAEV 350 >gi|325525326|gb|EGD03173.1| glycine cleavage system T protein [Burkholderia sp. TJI49] Length = 372 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 95/303 (31%), Gaps = 46/303 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L+ ++ DV+ LP + R + QG IL +I++I+++ F + ++ + Sbjct: 61 LTGTDAAAALETLVPIDVIDLPVGMQRYALFTNEQGGILDDLMIARIDDNVFYVVVNAAC 120 Query: 74 RDSLIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIAD 124 + I L L ++ +Q + + + +F+ R +A Sbjct: 121 KARDIAHLKDSIGHRCEVVELTDRALLALQGPAAASILGRLAPSLAELTFMQSTRIELAG 180 Query: 125 VL-------------------------LHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT 158 L RT + + + LR+ G+ Sbjct: 181 AACYVSRSGYTGEDGYEISVPADRAYALARTLLDDPAVQPIGLGARDSLRLEAGLCLYGH 240 Query: 159 DFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D T L+ ++ + G Y G VV+R I RKR + Sbjct: 241 DIDTDTTPIEGGLLWAISKVRRPDGARAGGYPGAAVVARQLAEGIQRKRVGFVVKDRVPV 300 Query: 215 PSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G+ I D IG + A+ I+ + V ++ + Sbjct: 301 REGTDITGPDGRSIGKVTSGGFGPTYGSPVAIGYVAIECATPGTTLHAIVRGKPVAIEVA 360 Query: 268 FPH 270 Sbjct: 361 KAP 363 >gi|260773858|ref|ZP_05882773.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio metschnikovii CIP 69.14] gi|260610819|gb|EEX36023.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio metschnikovii CIP 69.14] Length = 377 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+ ++ DV+ LP R + PQG IL +++ + D Sbjct: 59 SHMGQLRLHGVDAAAALERLVPVDVIDLPVGKQRYAIFTNPQGGILDDLMVANLG-DHLF 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDERF-- 120 L ++ + + I L + L + V +E+ ++ + + D RF Sbjct: 118 LVVNAACKAQDIAHLTAH-LPAGVHLEVIEDRALLALQGPKAAQILAQWQPAVADMRFMD 176 Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A H + + LR+ Sbjct: 177 IQTLAINGIECIVSRSGYTGEDGFEISVPADKAVAFAQALAEHPDVEWIGLGARDSLRLE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSR-IQHRNIIRK 202 G+ D T P +A + + G G + G E++ + I+ + + RK Sbjct: 237 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRIGGE--RAGGFPGAEIILKQIESKQVDRK 293 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 R ++ T G+ + +D ++G + Sbjct: 294 RVGLVGQTKAPVREGTELFDSDGNKVGIVTS 324 >gi|332531982|ref|ZP_08407866.1| aminomethyltransferase [Pseudoalteromonas haloplanktis ANT/505] gi|332038609|gb|EGI75052.1| aminomethyltransferase [Pseudoalteromonas haloplanktis ANT/505] Length = 360 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 94/290 (32%), Gaps = 47/290 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A FL+ ++ DV L A + +L QG ++ +I E + Sbjct: 50 SHMTIVDIEGPQAKAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYFFSETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + R+ + L + S +V + +P ++ ++ ++ A Sbjct: 110 RLVVNSATREKDLAHLA--NVSSDFDVTVTERPEFAMIAVQGPNAKAKTATLLNAEQQAA 167 Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147 L + + + L Sbjct: 168 VEGMKPFFGVQVGDLFIATTGYTGEDGYEIVVPNDQAADLWQQLLDAGVKPAGLGARDTL 227 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D ++ P A M +IG++V+ + + K ++ Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTDKLVGLV 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 + SGS ++ D E G + L A+AR+ + + Sbjct: 287 FEEKGVLRSGSKVIVDGGE-GVITSGTFSPTLGFSVALARVPRSTGDTAQ 335 >gi|111018161|ref|YP_701133.1| glycine cleavage system aminomethyltransferase T [Rhodococcus jostii RHA1] gi|110817691|gb|ABG92975.1| aminomethyltransferase [Rhodococcus jostii RHA1] Length = 366 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 96/306 (31%), Gaps = 48/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + TP G ++ + + D Sbjct: 54 SHLGKALVRGSGAAAFVNSALTNDLDKIGPGKAQYTLCCTPSGGVIDDLIAYFVSPDEVF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------PINGVVLSWNQEHTFSNSS 114 L + + ++ L V +E Q V+ + + Sbjct: 114 LVPNAANTADVVAALAATA-PEGVTVENQHRDFGVIAVQGPKSAEVLTALGLPTDIEYMA 172 Query: 115 FIDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHEL 147 F D + V + R+ W +EK+ + + L Sbjct: 173 FADATWDGVPVRVCRSGYTGEVGFELLPRWEDSEKLFRAAVELVRAHGGQVAGLGARDTL 232 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G + I P +A I K + G+E ++ + RK I Sbjct: 233 RTEMGYPLHGHELSLE-ISPLEARCGW--AIGWKKPKFWGKETLTDEKESGPARKLWGIK 289 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK-VDHAIKKGMALTVHGV 262 + +G +L D IG K +A+A +D + +A+ V G Sbjct: 290 ALDRGVLRAGQTVLRDGESIGETTSGTFSPTLKVGIALALLDSGAGVSAGDEIAVDVRGR 349 Query: 263 RVKASF 268 ++A Sbjct: 350 SLRAEV 355 >gi|10581080|gb|AAG19870.1| aminomethyltransferase [Halobacterium sp. NRC-1] Length = 387 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 105/312 (33%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ I+V G A +Q + T DV L A+ +AI G ++ ++ + D Sbjct: 75 SHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPG 134 Query: 64 TFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT---------- 109 F+ + + D+ ++ L ++V + G+V + Sbjct: 135 AFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD-NVTTDYGMVAVQGPDAPDLVAARAGDG 193 Query: 110 -------------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 ++ + ++ F N+ + Sbjct: 194 VHDLGRFEAATVGVAGVECLVANTGYTGEAGVEIVFPADGAGAVWDAIANDCQPCGLGAR 253 Query: 145 HELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRI-----QHR 197 LR+ HG + DF P P +A + ++ G ++G++ ++ Q Sbjct: 254 DTLRMEHGFLLSGQDFDPEENPRTPFEAGIGF--AVAPESG-FVGRDALADTDSPEQQFV 310 Query: 198 N-IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + +R + G P+G I + GT+ +G+ + + +D A +A Sbjct: 311 GLTLDERGVPRHGYAVTTPAGDEI--GTVTSGTMSPTLGEP-IGLGYVDSAHAADGTTVA 367 Query: 257 LTVHGVRVKASF 268 + + G +A+ Sbjct: 368 VRIRGTDKQATI 379 >gi|189220178|ref|YP_001940818.1| glycine cleavage system T protein (aminomethyltransferase) [Methylacidiphilum infernorum V4] gi|189187036|gb|ACD84221.1| Glycine cleavage system T protein (aminomethyltransferase) [Methylacidiphilum infernorum V4] Length = 379 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 100/281 (35%), Gaps = 54/281 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + V G A +L +I+T D+ L ++ + +LT +G I+ L+ +I + Sbjct: 62 LCHMGQFFVEGPKATEWLNSIVTNDLSVLKDGQSQYNLLLTEEGGIIDDLLLYRISSTAY 121 Query: 66 ILEIDRSKRD-----------------------------------SLIDK------LLFY 84 +L ++ + + S++ + L + Sbjct: 122 LLVVNANAAEKDHHLLRLLLPPEGVSLIDNRQKWGCIAIQGPQSWSILQRVFSIDPLPKH 181 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGH---NEKIASDI 141 LR +I E Q + ++ + SIA L +R N+ + + Sbjct: 182 TLR-KIIFEKQ---FLYIASTGYTGEPGAELFFP-GSIASALWNRLLEEGKKNDALPCGL 236 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR-NI 199 + + LR+ + TD P +A + + L+K + G+ + R++ Sbjct: 237 ASRNILRLEASLPLNGTDLREDK-NPWEAGL--SKAVCLSKPSFFPGKTALLRLKDTFQD 293 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + + + P +GSPI + + G + V +L Sbjct: 294 LLVAFVAVCEGCPQPKTGSPIFSMGEKKGEVTSGVWSPSLG 334 >gi|325474179|gb|EGC77367.1| aminomethyltransferase [Treponema denticola F0402] Length = 357 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 52/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A + A+IT D+ + R + + +G I+ FL+ + + F+ Sbjct: 49 SHMGEFYIEGDNAEAAVNALITNDIRGMADGDVRYTLMCNEKGGIVDDFLVYRYNQKKFL 108 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN-----VIIEIQPIN--GVVLSWNQEHTFSNS-- 113 L ++ D + L ++ + IQ N VV + ++ Sbjct: 109 LVVNAGNHDKDYDWVKKHLDKSVTFTDRSSEIAQLAIQGPNAPAVVKKFIAPSAMPSAYY 168 Query: 114 SFIDERFSIADVLLHRTW--GHNEKIASDIKTY-------------------------HE 146 +F + +V++ +T G N K + Sbjct: 169 TFKTFQCPKGEVIVSQTGYTGENGYEIYCPKEWALELFNQVMKAGEEFGIELCGLGCRDT 228 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ + + + I L K +IG++ + IRK + Sbjct: 229 LRLEAGMPLYGHEMT-EETLATEVTLKPF--IKLEKEDFIGKKAL-ETNEAKKIRKGFKM 284 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262 I + + D EIG + K + RID+ + + + V G Sbjct: 285 I--DRGIARDHDKVFLGDKEIGYVTTGTSSPSLKVGIGHMRIDR--GIKDEEVFIEVRGK 340 Query: 263 RVKASF 268 ++KA Sbjct: 341 KLKAKI 346 >gi|260432349|ref|ZP_05786320.1| sarcosine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260416177|gb|EEX09436.1| sarcosine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 817 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 91/320 (28%), Gaps = 67/320 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G A F+ V +P + L +G I ++++ Sbjct: 491 MSSFGKIRVEGPDAEKFM-----NYVGGGDYAVPVGKIVYTQFLNRRGGIEADVTVTRLS 545 Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------------------------KLRSNVIIEIQ 95 E +++ + R + ++ + L V + Sbjct: 546 ETAYLVVTPAATRLADQTWMMRHAGNFNVVITDVTAAEGVLAVMGPNSRALLEKVSPDDF 605 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147 QE R + L + ++ +T HE Sbjct: 606 SNAANPFGTAQEIEIGMGLARAHRVTYVGELGWEIYVSSDMAGHVFETLHEAGQDMGLKL 665 Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 RI G D DA + + + KGC +IG+E V + Sbjct: 666 CGLHMMDSCRIEKGFRHFGHDITCEDHV-VDAGLGF--AVKVDKGCDFIGREAVIARKES 722 Query: 198 NIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247 + R + TD P PI+ D +G L G L ++ Sbjct: 723 G-PKSRLVQFRLTDPEPLLFHNEPIIRDGEYVGYLSSGNYGHMLGGAIGLGYVPCEGERA 781 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + + V G +V+A Sbjct: 782 ADVLASTYEIDVCGAKVRAE 801 >gi|302338643|ref|YP_003803849.1| glycine cleavage system protein T [Spirochaeta smaragdinae DSM 11293] gi|301635828|gb|ADK81255.1| glycine cleavage system T protein [Spirochaeta smaragdinae DSM 11293] Length = 375 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 91/293 (31%), Gaps = 57/293 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ F+ ++T D+ + + + P G ++ +I ++ + + Sbjct: 52 SHMGEIMVEGPRAVEFVDYLVTNDISKMNDGKCLYALMCRPDGGVVDDLMIYRLSAEKIL 111 Query: 67 LEIDRSKRD------------------------------------------------SLI 78 + + + + + Sbjct: 112 IVANAANVEKDFVWISSANPWMQRESDKPKVSNQSDRYAQIAFQGPKANDYFRELLGQAV 171 Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138 D++ F++ R+++ + + + E F D+ I +L +T + Sbjct: 172 DEITFFRFRTDIPVAGKSCIISRTGYTGEDGFEIYCNADDAADIWTFILDKT-KERGVLP 230 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 + LR + + TI P +A + + K + G+ + + + + Sbjct: 231 CGLGARDTLRFEAKLPLYGHEL-SDTISPLEANLSFF--VKFDKHSDFCGKSALLKQKEK 287 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDK 246 I R +P G + D EIG + L + I++ Sbjct: 288 GIPRSLRGCEMVDKGVPREGYKVFLGDREIGYVTSGTKSPMLDSFLGLVLIER 340 >gi|187468775|emb|CAQ51662.1| novel protein (4930543L23Rik) [Mus musculus] Length = 215 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53 + L ++ ++V G A PFL + T ++ P A + L QG+ L Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108 Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKL 81 ++ +L S S + +L Sbjct: 109 DVILY-----GLLLNC--SAVASAVRQL 129 >gi|323492271|ref|ZP_08097429.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546] gi|323313584|gb|EGA66690.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546] Length = 372 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 110/310 (35%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL++++ D++ L R + QG I+ +++ + D Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLASGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 + ++ + ++ I+ L + L S V +EI ++ Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLAIQGPKAVDVLKRFNPEVADMLFMD 171 Query: 107 ---------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 E S S + E + A+ L + G E + LR+ Sbjct: 172 VKKLDILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTGEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIESKDVSRKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + +D ++G + ++A R D + + Sbjct: 292 LVGQTKAPVREGAELFDAEDNKVGVVTSGTAGPNAGKPVSMAYVRADLAAIGTELFADVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKKLPMTVEK 361 >gi|42527135|ref|NP_972233.1| glycine cleavage system T protein [Treponema denticola ATCC 35405] gi|41817559|gb|AAS12144.1| glycine cleavage system T protein [Treponema denticola ATCC 35405] Length = 357 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 102/306 (33%), Gaps = 52/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A + A+IT D+ + R + + +G I+ FL+ + + F+ Sbjct: 49 SHMGEFYIEGDNAEAAVNALITNDIRGMADGDVRYTLMCNEKGGIVDDFLVYRYNQKKFL 108 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN-----VIIEIQPIN--GVVLSWNQEHTFSNS-- 113 L ++ D + L ++ + IQ N VV + ++ Sbjct: 109 LVVNAGNHDKDYDWVKKHLDKSVTFTDRSSEIAQLAIQGPNAPAVVKKFIAPSAMPSAYY 168 Query: 114 SFIDERFSIADVLLHRTW--GHNEKIASDIKTY-------------------------HE 146 +F + +V++ +T G + K + Sbjct: 169 TFKTFQCPKGEVIVSQTGYTGEDGYEIYCPKEWALELFNQVMKAGEEFGIELCGLGCRDT 228 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ + + + I L K +IG++ + IRK + Sbjct: 229 LRLEAGMPLYGHEMT-EETLATEVTLKPF--IKLEKEDFIGKKAL-ETNEAKKIRKGFKM 284 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262 I + + D EIG + K + RID+ + + + V G Sbjct: 285 I--DRGIARDHDKVFLGDKEIGYVTTGTSSPSLKVGIGHMRIDR--GIKDEEVLIEVRGK 340 Query: 263 RVKASF 268 ++KA Sbjct: 341 KLKAKI 346 >gi|254505666|ref|ZP_05117812.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16] gi|219551319|gb|EED28298.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16] Length = 372 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 110/310 (35%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL++++ D++ LP R + QG I+ +++ + D Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPAGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 + ++ + ++ I+ L + L S V +E+ ++ Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEVIDDRALLALQGPKAVDVLKRFNAEVADMLFMD 171 Query: 107 ---------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 E S S + E + A L + E + LR+ Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNTHAQELAQKLTAEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTGGEREGGFPGADIILKQIETKDVTRKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + DD ++G + ++A R D + + + Sbjct: 292 LVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAGKPVSMAYVRADLMAVGTELFAEVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKKLPMTVEK 361 >gi|254435761|ref|ZP_05049268.1| glycine cleavage system T protein [Nitrosococcus oceani AFC27] gi|207088872|gb|EDZ66144.1| glycine cleavage system T protein [Nitrosococcus oceani AFC27] Length = 381 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 103/307 (33%), Gaps = 48/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I++ G+ PFL ++ +V L A S +L +G ++ ++ + E F Sbjct: 60 SHMTVIELKGEKVRPFLHQLLANNVDRLTVPGTALYSCMLNTEGGVIDDLIVYLMAEQEF 119 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + RD ++ + + V +E +P ++ E + E V Sbjct: 120 RVVSNAGTRDKVLAWIESHAAPFKVQVEERPELAMIAVQGPEARAQVHGQLPESLKEKVV 179 Query: 126 LLHR---TWGHNEKIA----------------SDIKTY-----------------HELRI 149 L R TW +A S + + LR+ Sbjct: 180 NLKRFQATWEEGLFVARTGYTGEDGYELLLSGSQAQDWWRRLQAGGAKPCGLGARDTLRL 239 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P ++ + + +IG+ V+ Q ++ ++ Sbjct: 240 EAGMCLYGADM-DETTTPLESGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQ 298 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVR 263 L +G I T+ +G V G +++A+AR+ V + + V Sbjct: 299 GKGLMRNGQTITTN---LGEGVVTSGGFSPSLERSIALARV-PVGADGPCEVQIRGRAVP 354 Query: 264 VKASFPH 270 P Sbjct: 355 AAMVKPP 361 >gi|163789512|ref|ZP_02183951.1| aminomethyltransferase [Carnobacterium sp. AT7] gi|159875366|gb|EDP69431.1| aminomethyltransferase [Carnobacterium sp. AT7] Length = 369 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK A FL ++T DV + A+ +AI+ G + +I K++E+ ++ Sbjct: 53 SHMGEILVKGKDAGVFLNYLLTNDVSKIKIGQAQYNAIVNEHGGTIDDLIIFKLDEEGYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 + + S D + + + L +V++E + + +L+ + Sbjct: 113 VTPNASNSDKVFQWMEKH-LTGDVVLENRSEDIGLLALQGPNA 154 >gi|311108797|ref|YP_003981650.1| glycine cleavage system protein T [Achromobacter xylosoxidans A8] gi|310763486|gb|ADP18935.1| glycine cleavage system T protein [Achromobacter xylosoxidans A8] Length = 366 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 2/118 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FLQ ++ DV L A S +L PQG ++ +I D + + ++ Sbjct: 58 VDVIGPDAYAFLQRLVANDVAKLTVPGKALYSCMLNPQGGVIDDLIIYFFAADEWRVVVN 117 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFIDERFSIADVLL 127 D + + K + I P + ++ + + + A L Sbjct: 118 AGTADKDVAWMQRVKQAGQFDVAITPRRDLAMVAVQGPNARAKVWAARPAWQAASEPL 175 >gi|206901737|ref|YP_002251224.1| glycine cleavage system T protein [Dictyoglomus thermophilum H-6-12] gi|206740840|gb|ACI19898.1| glycine cleavage system T protein [Dictyoglomus thermophilum H-6-12] Length = 356 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 38/259 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + GK A +Q I T DV L A+ S +L P G I ++ KI+E+ F+ Sbjct: 50 SHMGRILLKGKGAKDLVQYITTNDVNNLYPGKAQYSLVLNPTGTIKDDIIVYKIDEEEFL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ ++D L + V I + +L+ + Sbjct: 110 MVVNAINTQKILDWLNIHNKF-GVNILDITTDTTLLAIQGPASEKTLEDYFNLNLKNLKY 168 Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNEK--------------IASDIKTYHELRINHGI 153 F + I R + + + + LRI G Sbjct: 169 YHFQKNHIIISRTGYTGEDGFEIISDLDTGRKIFKDLVENKKVLPCGLGARNTLRIEMGY 228 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + +T P +A + + + + KG +IG++ + +++ + I + + Sbjct: 229 PLYGHEIDENTT-PWEANLGWV--VKINKGDFIGKDALIEKKNKKEKFLKGF-IMLENGI 284 Query: 214 PPSGSPILTDDIEIGTLGV 232 P + + +IG + Sbjct: 285 PRDSYEVYLGEEKIGYITS 303 >gi|228471296|ref|ZP_04056102.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3] gi|228306938|gb|EEK16036.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3] Length = 363 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + D L + S T QG +L FL+ + EED ++L + + Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEEDKYMLVPNAAN 116 Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92 K ++ +L L V Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKVGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151 P N ++ + + +++ G E I + + LR+ Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D ++ + + ++ K +G+E + + + + RK Sbjct: 236 GFCLYGNDIDDQHT-ALESGLGWITKLTDNKPALVGREALLKQKAEGVTRKLVAFEMVDK 294 Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P I+ + +IG + + + K +A+ + Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354 Query: 265 KASFPH 270 K P Sbjct: 355 KVVKPP 360 >gi|302886934|ref|XP_003042356.1| hypothetical protein NECHADRAFT_51705 [Nectria haematococca mpVI 77-13-4] gi|256723266|gb|EEU36643.1| hypothetical protein NECHADRAFT_51705 [Nectria haematococca mpVI 77-13-4] Length = 833 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 54/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69 ++V G A LQ + TA+V + +L G I +S++ ED F + + Sbjct: 505 LEVSGPGAAELLQRLSTANVAG-KPGTVTFTLLLDDHGGIRSDVFVSRLAEDLFHVGVNG 563 Query: 70 ---------------------------------------DRSK-------RDSLIDKLLF 83 R++ +D ++ L Sbjct: 564 PIDLVYFTREARAQTKKSPYRFVEVRDITGGLASVGFWGPRAQDAIKLITKDDFSERALP 623 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y +I P+ S+ E + + D + D L + IA+ Sbjct: 624 YLHTKKAVIAGIPVIATRFSYIGEQGWEIYTTADNGLRLWDAL-WQAGHPYGVIAAGRSA 682 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202 ++ LRI G D P++A ++ I K Y+GQ + + + R Sbjct: 683 FNALRIEKGFRSFGIDLTTE-YDPYEAGLEF--AIHPGKEGYVGQAALKGKSSEKAAKRL 739 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R +II + P+ +G + Sbjct: 740 RGLIINDGRSVVLGKEPVFAKGRAVGYITSSA 771 >gi|256823671|ref|YP_003147634.1| glycine cleavage system T protein [Kangiella koreensis DSM 16069] gi|256797210|gb|ACV27866.1| glycine cleavage system T protein [Kangiella koreensis DSM 16069] Length = 362 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 103/305 (33%), Gaps = 42/305 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + ++V G A +++ ++ DV L A S +L +G ++ ++ + + + Sbjct: 50 SHMTVVEVTGGEAKAYMRYLLANDVDKLKEPGKALYSGMLNEEGGVIDDLIVYYLTDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------------IQ 95 ++ S RD + + + +V IE + Sbjct: 110 RTVVNASTRDKDLAWMENVAQQFDVAIEERVDVAMIAVQGPNAVEKAQSIMSDQQKAVVA 169 Query: 96 PINGVVLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + V + + + + + E + + LR+ Sbjct: 170 DLKPFVAAQAGDLFVARTGYTGEDGYEIIVPDSKGIEFWNQLIEAGVKPCGLAARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P +A M ++G++ ++ + + RK ++ Sbjct: 230 EAGMNLYGHDM-DESVSPLEANMGWTIAWQPEDRDFVGRKALAEQKEQGAPRKLIGLVLE 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + G ++ +D +G + K++A+AR+++ + K + + + K Sbjct: 289 DKGIMREGQEVVVNDEIVGVVTSGTMSPTTSKSIAMARVNRDLNEEKVLVQVRKKQLAAK 348 Query: 266 ASFPH 270 P Sbjct: 349 VVKPS 353 >gi|83951258|ref|ZP_00959991.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius nubinhibens ISM] gi|83839157|gb|EAP78453.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius nubinhibens ISM] Length = 815 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 96/318 (30%), Gaps = 64/318 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G A FL V ++P + L +G I ++++ Sbjct: 490 MSSFGKIRVEGPDAEAFL-----NYVGGGDYSVPVGKIVYTQFLNSRGGIEADVTVTRMS 544 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102 E +++ + R + + +K NV+I ++ P GV+ Sbjct: 545 ETAYLVVTPAATRLADQTWMERHKGNFNVVITDVTPGEGVLAVMGPKARDVLQAVSPNDF 604 Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147 QE R + L + + +T +E Sbjct: 605 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSADMAGHAFETLYEAGQAHGLKL 664 Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI G D +A + + K +IG++ V R + Sbjct: 665 CGMHMMDSCRIEKGFRHFGHDITAEDHV-LEAGLGF--AVKTAKPEFIGRDAVLRKKDEG 721 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDH 249 + + +T + L P++ D +G L G L + + Sbjct: 722 LAARMVQFKLTDPEPLLYHNEPVIRDGEIVGYLSSGSYGHALGGAMGLGYVPCKGESAAD 781 Query: 250 AIKKGMALTVHGVRVKAS 267 + + V G RV+A Sbjct: 782 VLASTYEIDVAGTRVRAE 799 >gi|162450286|ref|YP_001612653.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56'] gi|161160868|emb|CAN92173.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56'] Length = 373 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 99/314 (31%), Gaps = 60/314 (19%) Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I + G+ + +L +T DV L A + G IL ++ +I+ Sbjct: 59 SHMGEIILSGEHSGQVVDYL---VTNDVKKLEDGHALYTCACNEAGTILDDLIVYRIDAR 115 Query: 64 TFILEIDRSKRDSLIDKLL-----------------FYKL---RSNVIIEIQPINGVVLS 103 +++ + S RD + + L ++ I+ + +G L Sbjct: 116 QWLIVCNASNRDKIAAHIRAAAQGHCSFEDASDRTAMMALQGPKALDIVALAGGDGPALR 175 Query: 104 WNQEHTFSNSSFIDERFSIA------------------DVLLHRTW----GHNEKIASDI 141 F +++ + R ++A L R G A+ + Sbjct: 176 ELAPFHFRDATLANVRCTVARTGYTGEDGIEIFCSPSDAQRLWRALVELGGPLGLEATGL 235 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ + D T P +A + + + L KG ++G+ + RI+ R Sbjct: 236 GARDTLRLEARLSLYGNDI-DETTNPIEAGLGWV--VKLDKGDFVGRAALQRIKDEGPAR 292 Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGV------VVGKKALAIARIDKVDHAIKKG 254 K + G P+L ++G V L A+ Sbjct: 293 KLVGFEMTGRGIARHGYPLLDVSGAKVGVCTSGSPGPTVGKNIGLGYLP--APMAAVGTA 350 Query: 255 MALTVHGVRVKASF 268 + G V+A Sbjct: 351 FQVDCRGRTVEAVV 364 >gi|223986323|ref|ZP_03636333.1| hypothetical protein HOLDEFILI_03643 [Holdemania filiformis DSM 12042] gi|223961712|gb|EEF66214.1| hypothetical protein HOLDEFILI_03643 [Holdemania filiformis DSM 12042] Length = 360 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 52/300 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FL ++T + L + R S + G + ++ + +++ F+ Sbjct: 51 SHMGEFLVEGPEAAAFLDHLLTNKIANLKHGQMRYSCLCYENGGTVDDLIVYRFDDEHFL 110 Query: 67 LEIDRSKRD---SLIDKLLFY--KLR------SNVII-------------EIQPINGVVL 102 ++ S + ++ + +LR S V + ++ + Sbjct: 111 CVVNASNKQKDWEWFNQNCRHNVQLRNVSSLISQVALQGPKAIEILGKIADLTSLPAKSY 170 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYH 145 + + + + + R + NE I + Sbjct: 171 WFTDQIAVAGKACLVSRNGYTGEDGVEIYMRNEDAMAIVGAIMTAGTPLGLIPCGLGARD 230 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + + T P +A ++ + L K +IG++ + Q + + + R Sbjct: 231 TLRLEAAMPLYGHELDAETS-PLEAGLNF--AVKLDKADFIGKQGI---QEKGLTKVRIG 284 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + + + D IG + KA+A+A +D VDHA VHG Sbjct: 285 LELLDRGIAREHYEVRQDGAVIGHITSGTMAPTLGKAIAMAYVD-VDHAQDGAEVEVVHG 343 >gi|189238264|ref|XP_974499.2| PREDICTED: similar to chloride channel protein 2 [Tribolium castaneum] Length = 1612 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 56/300 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G + ++++I TAD+ TLP + + +G +L +I+KI +D + + + Sbjct: 1290 EISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNAA 1349 Query: 73 KRDSLIDKLL---------------FYKLR---------------SNV--IIEIQPINGV 100 + LL K + V + ++ + Sbjct: 1350 MKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKL 1409 Query: 101 VLSWNQEHTF--------------SNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145 + E T F +I V + R NE + + + Sbjct: 1410 YFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARD 1469 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D T P +A + L + + G E + RKR Sbjct: 1470 SLRLEAGMCLYGNDLTAETT-PIEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRV 1528 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +I + G+PI+ + EIG++ A+A D + K + + Sbjct: 1529 GLIADSGPPARHGTPIVDANGNEIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKI 1588 >gi|270008909|gb|EFA05357.1| hypothetical protein TcasGA2_TC015522 [Tribolium castaneum] Length = 403 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 56/300 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G + ++++I TAD+ TLP + + +G +L +I+KI +D + + + Sbjct: 81 EISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNAA 140 Query: 73 KRDSLIDKLL---------------FYKLR---------------SNV--IIEIQPINGV 100 + LL K + V + ++ + Sbjct: 141 MKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKL 200 Query: 101 VLSWNQEHTF--------------SNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145 + E T F +I V + R NE + + + Sbjct: 201 YFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARD 260 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D T P +A + L + + G E + RKR Sbjct: 261 SLRLEAGMCLYGNDLTAETT-PIEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRV 319 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +I + G+PI+ + EIG++ A+A D + K + + Sbjct: 320 GLIADSGPPARHGTPIVDANGNEIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKI 379 >gi|188577343|ref|YP_001914272.1| glycine cleavage system aminomethyltransferase T [Xanthomonas oryzae pv. oryzae PXO99A] gi|238689551|sp|B2SSQ1|GCST_XANOP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|188521795|gb|ACD59740.1| glycine cleavage system T protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 369 Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + +R +V +E + ++ + +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAVRFDVRVEERSDFAMIAVQGPNARANVIDLLDPADTAAAS 169 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R + I+ + G + + P +A + N + Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216 >gi|58581417|ref|YP_200433.1| glycine cleavage system aminomethyltransferase T [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623354|ref|YP_450726.1| glycine cleavage system aminomethyltransferase T [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|75508239|sp|Q5H1X3|GCST_XANOR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123522400|sp|Q2P4S5|GCST_XANOM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|58426011|gb|AAW75048.1| glycine cleavage T protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367294|dbj|BAE68452.1| probable aminomethyltransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 369 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + +R +V +E + ++ + +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAVRFDVRVEERSDFAMIAVQGPNARANVIDLLDPADTAAAS 169 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R + I+ + G + + P +A + N + Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216 >gi|254430704|ref|ZP_05044407.1| glycine cleavage system T protein [Cyanobium sp. PCC 7001] gi|197625157|gb|EDY37716.1| glycine cleavage system T protein [Cyanobium sp. PCC 7001] Length = 368 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 95/323 (29%), Gaps = 69/323 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62 S+ + + G A LQ ++ D+ + A + +L +G I ++ Sbjct: 51 SHMGVLTLRGDGAKDALQGLVPTDLFRIGPGEACYTVLLNEKGGIRDDLIVYDRGRQADA 110 Query: 63 -----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------NGVVLSWNQEHTF 110 D +L I+ + D+ + +E Q I +GV+L+ Sbjct: 111 GGGVCDELVLVINAACADTDTAWICG-------QLEPQGIGVSDRKGDGVLLALQGPEAQ 163 Query: 111 SNSSFID-------ERFS------------------------------IADVLLHRTWGH 133 S + RF A V L + Sbjct: 164 SRLEALSGTSLDGLPRFGHRELKLAGCTAFVGRTGYTGEDGFELLLPREAGVALWQQLVG 223 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + LR+ + + +T P +A + L + + K ++G+EV+ R Sbjct: 224 AGVTPCGLGARDTLRLEAAMHLYGQEMDANTT-PLEAGLGWLVHLEMPKP-FVGREVLER 281 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKV 247 + R+ ++ + G P+L +G + ALA + Sbjct: 282 QSAEGVSRRLVGLMLQGRAIARHGYPVLHGGRAVGEVTSGTWSPTLGEAIALAYVPTEAA 341 Query: 248 DHAIKKGMALTVHGVR-VKASFP 269 + + + V P Sbjct: 342 RIGTELAVEIRGKAEPAVVVKRP 364 >gi|77164028|ref|YP_342553.1| glycine cleavage system T protein [Nitrosococcus oceani ATCC 19707] gi|123771819|sp|Q3JDS3|GCST_NITOC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|76882342|gb|ABA57023.1| Glycine cleavage system T protein [Nitrosococcus oceani ATCC 19707] Length = 371 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 103/307 (33%), Gaps = 48/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I++ G+ PFL ++ +V L A S +L +G ++ ++ + E F Sbjct: 50 SHMTVIELKGEKVRPFLHQLLANNVDRLTVPGTALYSCMLNTEGGVIDDLIVYLMAEQEF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + RD ++ + + V +E +P ++ E + E V Sbjct: 110 RVVSNAGTRDKVLAWIESHAAPFKVQVEERPELAMIAVQGPEARAQVHGQLPESLKEKVV 169 Query: 126 LLHR---TWGHNEKIA----------------SDIKTY-----------------HELRI 149 L R TW +A S + + LR+ Sbjct: 170 NLKRFQATWEEGLFVARTGYTGEDGYELLLSGSQAQDWWRRLQAGGAKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P ++ + + +IG+ V+ Q ++ ++ Sbjct: 230 EAGMCLYGADM-DETTTPLESGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQ 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVR 263 L +G I T+ +G V G +++A+AR+ V + + V Sbjct: 289 GKGLMRNGQTITTN---LGEGVVTSGGFSPSLERSIALARV-PVGADGPCEVQIRGRAVP 344 Query: 264 VKASFPH 270 P Sbjct: 345 AAMVKPP 351 >gi|169236303|ref|YP_001689503.1| glycine cleavage system aminomethyltransferase T [Halobacterium salinarum R1] gi|228915427|ref|NP_280390.2| glycine cleavage system aminomethyltransferase T [Halobacterium sp. NRC-1] gi|31340146|sp|Q9HPJ7|GCST_HALSA RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|229807550|sp|B0R5Y8|GCST_HALS3 RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|167727369|emb|CAP14157.1| aminomethyltransferase (glycine cleavage system protein T) [Halobacterium salinarum R1] Length = 363 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 105/312 (33%), Gaps = 57/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ I+V G A +Q + T DV L A+ +AI G ++ ++ + D Sbjct: 51 SHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPG 110 Query: 64 TFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT---------- 109 F+ + + D+ ++ L ++V + G+V + Sbjct: 111 AFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD-NVTTDYGMVAVQGPDAPDLVAARAGDG 169 Query: 110 -------------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 ++ + ++ F N+ + Sbjct: 170 VHDLGRFEAATVGVAGVECLVANTGYTGEAGVEIVFPADGAGAVWDAIANDCQPCGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRI-----QHR 197 LR+ HG + DF P P +A + ++ G ++G++ ++ Q Sbjct: 230 DTLRMEHGFLLSGQDFDPEENPRTPFEAGIGF--AVAPESG-FVGRDALADTDSPEQQFV 286 Query: 198 N-IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + +R + G P+G I + GT+ +G+ + + +D A +A Sbjct: 287 GLTLDERGVPRHGYAVTTPAGDEI--GTVTSGTMSPTLGEP-IGLGYVDSAHAADGTTVA 343 Query: 257 LTVHGVRVKASF 268 + + G +A+ Sbjct: 344 VRIRGTDKQATI 355 >gi|317405542|gb|EFV85847.1| glycine cleavage system T protein [Achromobacter xylosoxidans C54] Length = 366 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G A FLQ ++ DV L A + +L PQG ++ ++ D + + ++ Sbjct: 60 VTGPDAYAFLQRLVANDVAKLTVPGKALYTCMLNPQGGVIDDLIVYFFALDEWRVVVNAG 119 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFIDERFSIADVLL 127 D + + K + I P + ++ + + + A L Sbjct: 120 TADKDMAWMQRVKQAGKFDVTITPRRDLAMIAVQGPNARAKVWAARPAWQAASEPL 175 >gi|110677436|ref|YP_680443.1| FAD dependent oxidoreductase, putative [Roseobacter denitrificans OCh 114] gi|109453552|gb|ABG29757.1| FAD dependent oxidoreductase, putative [Roseobacter denitrificans OCh 114] Length = 815 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 95/321 (29%), Gaps = 68/321 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A+ F+ DV P + L +G I ++++ Sbjct: 489 MSSFGKIRVEGRDAVAFMNHVGGGQF--DV---PVGKIVYTQFLNHKGGIEADVTVTRLS 543 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102 E F++ + R L D+ + R + V+ ++ GV+ Sbjct: 544 ETAFLVVTPAATR--LADQTWMMRHRGDFNVVVTDVTAGEGVLAIMGPNARKLLQEVSPA 601 Query: 103 ---------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------- 146 QE R + L + ++ A + HE Sbjct: 602 DFSNAVNPFGTAQEIELGMGLARVHRVTYVGELGWEVYVSSDMAAHAFEVLHEAGQDLGV 661 Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 R+ G D +A + + K +IG++ V R + Sbjct: 662 KLCGMHMMDCARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKKD 718 Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247 + + + + L P+L + +G L G L + Sbjct: 719 TGLESRLVQFKLKDPEPLLYHNEPVLRNGEIVGFLSSGAYGHHLGGAMGLGYVPCAGETA 778 Query: 248 DHAIKKGMALTVHGVRVKASF 268 + + V GVRV A Sbjct: 779 AEVLASDYEVDVAGVRVAADV 799 >gi|119471832|ref|ZP_01614165.1| glycine cleavage system aminomethyltransferase T [Alteromonadales bacterium TW-7] gi|119445322|gb|EAW26611.1| glycine cleavage system aminomethyltransferase T [Alteromonadales bacterium TW-7] Length = 360 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 93/290 (32%), Gaps = 47/290 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A FL+ ++ DV L A + +L QG ++ +I E + Sbjct: 50 SHMTIVDIEGDQAKAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYFFSETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + R+ + L + S+ V + +P ++ + ++ A Sbjct: 110 RLVVNSATREKDLAHLA--NVSSDFAVTVTERPEFAMIAVQGPNAREKTGTLLNAEQQAA 167 Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147 L + + + L Sbjct: 168 VEGMKPFFGVQVGDLFIATTGYTGEDGYEIVVPNDQAADLWQQLLDAGVAPAGLGARDTL 227 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G+ D ++ P A M +IG++V+ + + K ++ Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTDKLVGLV 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 + SGS ++ D E G + L A+AR+ + + Sbjct: 287 LEEKGVLRSGSKVIVDGGE-GVITSGTFSPTLGFSVALARVPRSTGDTAQ 335 >gi|218891576|ref|YP_002440443.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58] gi|254235451|ref|ZP_04928774.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719] gi|254240878|ref|ZP_04934200.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192] gi|126167382|gb|EAZ52893.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719] gi|126194256|gb|EAZ58319.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192] gi|218771802|emb|CAW27579.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58] Length = 373 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEDRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|304317374|ref|YP_003852519.1| glycine cleavage system protein T [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778876|gb|ADL69435.1| glycine cleavage system T protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 367 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 61/313 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + GK + F+ II+ ++ + A S + G + L+ K + ++ Sbjct: 53 SHMGELIIEGKDSEKFINYIISNNIAKISDNQAMYSPMCYANGTTVDDLLVYKFSNEKYM 112 Query: 67 LEIDRS-----------------------------------KRDSLIDKLLFYKL----- 86 L ++ S K ++ K Y L Sbjct: 113 LVVNASNIDKDYNWIFENKSGYNIAVKNISNEVSELALQGPKAQEILQKTTEYNLDDMKY 172 Query: 87 --RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDI 141 I + +N ++ F+ R A + + E+ + + Sbjct: 173 YHFDK--INLAGVNCLISRTGYTGEDGFEIFL--RNDYAQSMWEKILAVGEEFGIKPAGL 228 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR G+ + I P +A + + K +IG++ + + + + R Sbjct: 229 GARDTLRFEAGLPLYGNEL-SDEITPLEAGLGSF--VKFEKA-FIGRDALFKQKQDGLKR 284 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 K + +P G + +IG + +A+ I I + Sbjct: 285 KIVGFEMIENGIPRHGYDVCAQGEKIGYVTTGYLSPTLKKNIGMAL--ISSKFANIGNEI 342 Query: 256 ALTVHGVRVKASF 268 ++ + +KA Sbjct: 343 SIIIRNKPLKAIV 355 >gi|293607679|ref|ZP_06690010.1| aminomethyltransferase [Achromobacter piechaudii ATCC 43553] gi|292813817|gb|EFF72967.1| aminomethyltransferase [Achromobacter piechaudii ATCC 43553] Length = 366 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FLQ ++ DV L A S +L PQG ++ +I D + + ++ Sbjct: 58 VDVAGPDAFAFLQRLVANDVARLTVPGKALYSCMLNPQGGVIDDLIIYFFAADEWRVVVN 117 Query: 71 RSKRDSLIDKLLFYKL----------RSNVI-IEIQPINGVVLSWN-----QEHTFSNSS 114 D + + K R ++ + +Q N W Q T + + Sbjct: 118 AGTADKDVAWMQRVKQAGNFDVAITPRRDLAMVAVQGPNARAKVWAARPAWQAATEALTP 177 Query: 115 FIDERFSIADVLLHRTWGHNEK 136 F+ R D L+ RT E Sbjct: 178 FVAARI-DGDTLVARTGYTGED 198 >gi|163744121|ref|ZP_02151486.1| FAD dependent oxidoreductase/aminomethyl transferase [Phaeobacter gallaeciensis 2.10] gi|161382619|gb|EDQ07023.1| FAD dependent oxidoreductase/aminomethyl transferase [Phaeobacter gallaeciensis 2.10] Length = 817 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 94/315 (29%), Gaps = 58/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G A FL I A++ ++P + L +G I ++++ E + Sbjct: 492 MSSFGKIRVEGPDAEKFLNYICGANL-SVPAGKIVYTQFLNTRGGIEADVTVTRLSETAY 550 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 ++ R + ++ + V+I ++ GV+ Sbjct: 551 LVVTPAVTRLADQTWMMRHVGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 610 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 QE R + L + + +T HE Sbjct: 611 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLHEAGQDMGLKLCGMH 670 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D DA + + K +IG+ V ++ R Sbjct: 671 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKADFIGKAAVLELKETG-PRN 726 Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK------ALAIARID--KVDHAIK 252 R + TD P PI+ D +G L + D + Sbjct: 727 RMVQFKLTDAEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCDGESAADVLG 786 Query: 253 KGMALTVHGVRVKAS 267 + V GV+VKA Sbjct: 787 SSYEIDVCGVKVKAE 801 >gi|15642984|ref|NP_228026.1| glycine cleavage system aminomethyltransferase T [Thermotoga maritima MSB8] gi|11132546|sp|Q9WY54|GCST_THEMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|55670726|pdb|1WOO|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage System gi|55670727|pdb|1WOP|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage System gi|55670730|pdb|1WOR|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage System gi|55670731|pdb|1WOS|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage System gi|4980709|gb|AAD35303.1|AE001706_2 aminomethyltransferase [Thermotoga maritima MSB8] Length = 364 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D + Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112 + ++ + + + + + +V + ++++ + Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEVSNISDTTALIAFQGPKAQETLQELVEDGLEEIAY 168 Query: 113 SSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147 SF + + L+ RT E + + K + L Sbjct: 169 YSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLLRKIDGRPAGLGARD 228 Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R+ + D P + + + + L K ++G+E + ++ + + ++ + Sbjct: 229 VCRLEATYLLYGQDM-DENTNPFEVGLSWV--VKLNKD-FVGKE--ALLKAKEKVERKLV 282 Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + + + G +L + +G + ALA+ V ++K G L Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKIGDQLG 337 Query: 259 V 259 V Sbjct: 338 V 338 >gi|332031409|gb|EGI70922.1| Aminomethyltransferase, mitochondrial [Acromyrmex echinatior] Length = 360 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 47/265 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK +L+++ T D+ L A + +G IL +I+K +ED + + + + Sbjct: 43 VSGKDTGEYLESLTTCDLKNLSRGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAGR 102 Query: 74 RDS----LIDK---LLFY--------------------------KLRSNVIIEIQPINGV 100 RD L+++ L S V I+++ + + Sbjct: 103 RDEDSRLLLERQDDFKKIGKDVYIDFLDPLEQGLIALQGPTAETVLHSLVKIDLRSLKFM 162 Query: 101 VLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + T + I + A L+ R + + LR+ Sbjct: 163 NSVKTEVSGSRIRISRCGYTGEDGFEISVPANDAINLVERILEIPGVKLAGLGARDSLRL 222 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ D P +A + L + + G + + +KR ++ Sbjct: 223 EAGLCLYGHDI-NEDTTPIEAALTWLVAKRRRVEANFPGAQRILSQIKTGTTKKRVGLLL 281 Query: 209 GTDDLPPSGSPILT-DDIEIGTLGV 232 G G+PILT + +G++ Sbjct: 282 GQGPPAREGAPILTPEGERVGSVTS 306 >gi|260575689|ref|ZP_05843686.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2] gi|259022087|gb|EEW25386.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2] Length = 793 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 87/274 (31%), Gaps = 46/274 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A LQ + DV +P + +L +G I ++++ E F Sbjct: 489 MTSFGKIRVEGRDARALLQRLCGNDVD-VPVGRIVYTQMLNARGGIESDLTVTRLTETAF 547 Query: 66 ILEIDRSKRDSLIDKLLF-----YKLRSNVIIEIQ------PINGVVLSWNQEHTFSNSS 114 +L + + + L + + ++V P + +L+ FSN++ Sbjct: 548 LLVVPGATLQRDLAWLRRHLGEAFAVVTDVTAAEAVLCVMGPKSREMLASVSPDDFSNAA 607 Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIA---------------SDIKTY 144 R + L + ++ A + T Sbjct: 608 HPFGTAREIEIGMGVARAHRVTYVGELGWELYVSTDQAAHVFEALLEADPGLKLCGLHTL 667 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 R+ D +A + + KG +IG+E V R + R+ Sbjct: 668 DSCRMEKAYRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGREAVLRKAEAGLERRLV 724 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 +T + + ++ D +G + Sbjct: 725 QFRLTDPEPMLFHNEAVVRDGKIVGPVTSGAYGH 758 >gi|56698220|ref|YP_168592.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] gi|56679957|gb|AAV96623.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] Length = 816 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 94/326 (28%), Gaps = 70/326 (21%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFL 56 + +S+ I+V G A +L DV P + L G I Sbjct: 486 LGMYDMSSFGKIRVEGPDATAYLNHIAGGQF--DV---PVGRIVYTQFLNVNGGIEADVT 540 Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKL---RSNVIIEIQPINGVVL----------- 102 ++++ E +++ + R + + +L VI ++ GV+ Sbjct: 541 VTRLSETAYLVVTPAATRYADQTR--MMRLVGDFRVVITDVTAGEGVLAVMGPKARELMA 598 Query: 103 --------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL- 147 QE R + L + ++ +T E Sbjct: 599 RVSPNDFSNDVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSSDMAGHAFETLFEAG 658 Query: 148 ----------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 RI D P +A + + K +IG++ V Sbjct: 659 QDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHV-LEAGLGF--AVKTDKPDFIGRDAV 715 Query: 192 SRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI- 244 R + ++ R + TD P P+L D +G L A+ + + Sbjct: 716 LRKKDEG-LKTRMVQFRLTDPEPLLYHNEPLLRDGQIVGYLSSGAYGHHLGSAIGMGYVP 774 Query: 245 ---DKVDHAIKKGMALTVHGVRVKAS 267 + + + V G RV+A Sbjct: 775 CEGESAADVLASTYEIDVMGTRVRAE 800 >gi|94968297|ref|YP_590345.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Koribacter versatilis Ellin345] gi|94550347|gb|ABF40271.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Koribacter versatilis Ellin345] Length = 400 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 98/327 (29%), Gaps = 78/327 (23%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A F+ +IT D+ + GK++ I+++ E+T+ + Sbjct: 60 ITGDDATQFVNRVITRDIKKVAINQVIYCCWCDQDGKVIDDGTITRLGENTYRW----TA 115 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------------- 118 D + + V IE + L+ + + + + E Sbjct: 116 ADPSLRWFRQNSIAMKVQIEDISESVSALALQGPTSAALLASVAEADIANLKYFRMTKGR 175 Query: 119 ---------RFSIADVLLHRTWGHNE-------KIASDIKTYHEL----------RINHG 152 R L + W E +A+ + RI G Sbjct: 176 INGIDVDISRTGYTGDLGYEIWIPWEHSLRVWDALATAGNAFDLHPVGMLALDVARIEAG 235 Query: 153 IVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-- 202 ++ D+ P + D + + L K ++G+E + + + RK Sbjct: 236 LLLIEVDYFSSKKALIDSQKYSPFELGFDKM--VHLDKETFVGREALLKEKGSRTGRKLV 293 Query: 203 ----------RPMIITGTDDLPPSGS-----PILTDDIEIGTLGVVVGKKAL----AIAR 243 + G PS + P+ +++ G L A+A Sbjct: 294 GLEFDWTAVEKLYDRVGLPPQVPSAASRVPVPVYRGNVQAGKATSTTWSPILKKMIALAS 353 Query: 244 IDKVDHAI--KKGMALTVHGVRVKASF 268 +D AI + +T+ VR K + Sbjct: 354 VDAAHSAIGTELQAEITIEAVRYKTAV 380 >gi|163746324|ref|ZP_02153682.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex HEL-45] gi|161380209|gb|EDQ04620.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex HEL-45] Length = 815 Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 87/321 (27%), Gaps = 64/321 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLIS 58 +S+ I+V G A FL V + +P + L P+G I ++ Sbjct: 487 LYDMSSFGKIRVEGPEAEAFL-----NHVCGAQMAVPVGKIVYTQFLNPRGGIEADITVT 541 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 ++ E +++ + R + L + V+I VL+ + I Sbjct: 542 RLSETAYLVVTPAATRLADETWLRRHAGERRVVITDVTAGEAVLAVMGPNARRLLQAISP 601 Query: 119 --------------------------RFSIADVLLHRTWGHNEKIA-------------- 138 R S L + E A Sbjct: 602 NDFSNVVHPFGMAREIEIGMGLARAHRVSYVGELGWEIYVSTEMAAHVFEVLMEAGAAFG 661 Query: 139 ---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + RI G D +A + + K +IG++ V R + Sbjct: 662 LKLCGLHAMDSCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKK 718 Query: 196 HRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DK 246 + + + + L PIL D G L G L Sbjct: 719 EEGLKLRMLQFRLNDPEPLLYHAEPILRDGRIAGYLSSGNYGHHLGGAIGLGYVPCAGQS 778 Query: 247 VDHAIKKGMALTVHGVRVKAS 267 V + + + G RV+A Sbjct: 779 VADLLGSTYEIDIAGRRVRAE 799 >gi|260654612|ref|ZP_05860102.1| glycine cleavage system T protein [Jonquetella anthropi E3_33 E1] gi|260630628|gb|EEX48822.1| glycine cleavage system T protein [Jonquetella anthropi E3_33 E1] Length = 362 Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 81/270 (30%), Gaps = 47/270 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK + +L +++T DV T+ + + G ++ L+ + + ++ Sbjct: 44 SHMGEVTVVGKDSEAWLNSLLTNDVTTMHDGQVLYTIMCRENGGVVDDLLVYRYNTERYL 103 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI--------------------------QPINGV 100 L I+ + + + L+ +V I+ P V Sbjct: 104 LVINAANVEKDWAWFNEH-LKGDVKIDNISAKTAEVALQGPLAEKILCKIAEGFDPTKLV 162 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIAS-DIKT 143 + + I R + G E + + Sbjct: 163 FFHFVDGVKVAGIPAIVSRTGYTGEDGFEIYVDWSKGAELWDAIIAAGKPEGLMPIGLGA 222 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G+ ++ + P +A + G +IGQ+V+ + + + RK Sbjct: 223 RDSLRFESGLPLCGQEYT-DDLGPLEAGYGFFVKVDKPNG-FIGQKVLRQQKAEGLKRKI 280 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 +P + +G + Sbjct: 281 VFTKMIDKGVPRHEMEVADASGKVVGCVTT 310 >gi|163758639|ref|ZP_02165726.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43] gi|162283929|gb|EDQ34213.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43] Length = 814 Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 92/314 (29%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I+V G+ A+ FLQ + D+ + + +L +G I ++++ E F Sbjct: 489 MTSFGKIRVEGRDALSFLQRLCANDMD-VAPGRIVYTQMLNARGGIECDLTVTRLTETAF 547 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107 +L + + + L + S +I VL N Sbjct: 548 LLVVPGATLQRDLAWLRRHVGDSFAVITDVTAAEAVLCVMGPNARSLLQAVSPNDFSNDA 607 Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142 H F + R + L + +++ A + Sbjct: 608 HPFGIAREIEIGMGLARAHRVTYVGELGWELYVSSDQAAHVFETLAEAGGDHGLKLCGLH 667 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T RI D +A + + KG +IG++ V + + R+ Sbjct: 668 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGRDAVLAKREAGLSRR 724 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIKK 253 + + L I+ D + + G L + + Sbjct: 725 LVQFQLRDPEPLLFHNEVIVRDGEIVSIITSGNYGHHLGGAIGLGYVPSAGESAADVLAS 784 Query: 254 GMALTVHGVRVKAS 267 + + G R +A Sbjct: 785 SYEIEIAGERHQAI 798 >gi|118462423|ref|YP_881484.1| glycine cleavage system aminomethyltransferase T [Mycobacterium avium 104] gi|166221557|sp|A0QEZ6|GCST_MYCA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|118163710|gb|ABK64607.1| glycine cleavage system T protein [Mycobacterium avium 104] Length = 367 Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + +++D Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + ++++ L RS ++ +Q V+ ++ Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTVSNLHRSYAVLAVQGPRSADVLAELGLPSDMDYMAY 174 Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148 D F V + RT W + + LR Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + P I P A I K + G++ + + R+ R + Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L +G +L D +G +A+A ID D ++ G +TV Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALID-TDADVRDGQKVTVDVR 348 Query: 261 --GVRVKASFPH 270 + P Sbjct: 349 GRAATCEVVRPP 360 >gi|254456036|ref|ZP_05069465.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp. HTCC7211] gi|207083038|gb|EDZ60464.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp. HTCC7211] Length = 392 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 62/282 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI-LEID 70 I++ G FL+ ++T V T+ S TPQG I + +I K E+ F ++ D Sbjct: 74 IEISGPDVAAFLEKVMTRKVSTIKEGRGYYSLACTPQGGIFMDGVIFKFSENKFWYVQAD 133 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------------NSS 114 D L+ + +V I + P + V+ S Sbjct: 134 GPFEDWLLAHSKGF----DVKI-LDPKSRVIQIQGPASIDIMKAASNGKINENMQYYRSG 188 Query: 115 FID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------- 147 F D R + L + K + + L Sbjct: 189 FFDLGGQNLYVSRSGFTNELGFEIYSDGFKTDH-LALWDHLMNCGKPFGMELSATRAMTI 247 Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI GI N + +TI P +A + +++ K +IG++ + + + Sbjct: 248 RRIEAGIF-GNLTDIDTTINPFEAGLGF--CVNMDKEDFIGRDALLN-KDKGTC---LFG 300 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 +T + P SGS ++ +D +G + V + R Sbjct: 301 LTCKTETPVSGSKVIDEDKIVGHITAGVHSLTLNTGIGYVRF 342 >gi|289524478|ref|ZP_06441332.1| aminomethyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502284|gb|EFD23448.1| aminomethyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 176 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V GK A+ F+ ++T DV L S + G ++ LI +E+ F+ Sbjct: 59 SHMGEITVEGKDALKFINYLVTNDVTKLVPGKVMYSPMCYEHGGVVDDLLIYMYDENRFL 118 Query: 67 LEIDRSKRD 75 L ++ + +D Sbjct: 119 LVVNAANKD 127 >gi|323499244|ref|ZP_08104221.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326] gi|323315632|gb|EGA68666.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326] Length = 372 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 110/311 (35%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL++++ D++ LP R + QG I+ +++ + D Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPQGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDERF-- 120 + ++ + ++ I+ L + L S V +EI ++ + N+ D F Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLALQGPKAVDVLKRFNADVADMLFMD 171 Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + A+ L + E + LR+ Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTLEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204 G+ D T P +A + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDT-TTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 290 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257 ++ T G+ + DD ++G + ++A R D + + + Sbjct: 291 GLVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAGKPVSMAYVRADLMAVGTELFAEV 350 Query: 258 TVHGVRVKASF 268 + + Sbjct: 351 RGKKLPMTVEK 361 >gi|78778663|ref|YP_396775.1| hypothetical protein PMT9312_0278 [Prochlorococcus marinus str. MIT 9312] gi|78712162|gb|ABB49339.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 278 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 22/249 (8%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70 V GK A FL I T ++L + LTP G + L+ + + + IL Sbjct: 17 SVSGKDAKKFLNGITTGNILN-SENKVTKTCWLTPTGILRSLIEIIFLEKSLEVIIL--- 72 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 + +ID ++ + I + + S ++ F D Sbjct: 73 AGNINEIIDYFNQIIFPAD-DVLISEPFSINRIQEIDEISSWRTYQPIFFKKNDKEFE-- 129 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 N+ + ++N I + + P + + L I KGC++GQE Sbjct: 130 IYKNKLNLLNSNDLKLWKVNQAIPSLDMEI-NGKNNPLELGLQDL--IDFNKGCFLGQET 186 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTD---DIEIGTLGVVVGK----KALA 240 +S+I++ + +++ + D + T+ + +G + + K LA Sbjct: 187 MSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDHHIKGLA 246 Query: 241 IARIDKVDH 249 + + ++ Sbjct: 247 MIKKKYLEE 255 >gi|87123424|ref|ZP_01079275.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. RS9917] gi|86169144|gb|EAQ70400.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. RS9917] Length = 366 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 54/304 (17%) Query: 7 SNQSFIKVCG---KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ +++ G K A LQ ++ +D+ + A + +L G IL ++ +E+ Sbjct: 51 SHMGVVRLDGTNPKDA---LQGLVPSDLHRIGPGQACYTVLLNANGGILDDLIVYDLEDG 107 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------ 117 +L I+ + L + + + + +G++L+ + + Sbjct: 108 ALLLVINAACAARDTAWLRDHLEPAGIHLSDVKGDGLLLALQGPEARQHLEALSGNDLQE 167 Query: 118 -ERFS-----------------------------------IADVLLHRTWGHNEKIASDI 141 RF A L + Sbjct: 168 LPRFGHRWLQISGLTPEPTRVLAARTGYTGEDGFELLLPREAGRALWSQLLERGVRPCGL 227 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ + D +T P A + L + +IG++ + R + R Sbjct: 228 GARDSLRLEAAMHLYGQDMDQNTS-PLQAGLGWLVHLE-NPVPFIGRDALEREVEQGSER 285 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMAL 257 + + +P G PIL D +GT+ + + + + +A+ Sbjct: 286 RLVGLRLEGRAIPRHGYPILHDGQPVGTITSGGWSPTLEAGIGLGYVSRSLARAGTDLAV 345 Query: 258 TVHG 261 + G Sbjct: 346 EIRG 349 >gi|300689857|ref|YP_003750852.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Ralstonia solanacearum PSI07] gi|299076917|emb|CBJ49530.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Ralstonia solanacearum PSI07] Length = 375 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQAPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + I +V Q I R S + Sbjct: 111 RLVVNAGTAPT-------------------DIEWIVA---QNAAAGTGVTITPRRSDNNA 148 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + KTY L P T + + P +A L+G+ Sbjct: 149 GTEPLGILAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATLDGV------ 194 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 195 --GEIMVARTGYTG 206 >gi|238787334|ref|ZP_04631133.1| Aminomethyltransferase [Yersinia frederiksenii ATCC 33641] gi|238724596|gb|EEQ16237.1| Aminomethyltransferase [Yersinia frederiksenii ATCC 33641] Length = 365 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + RD +D + + V + ++ +V E ++ + A Sbjct: 110 RLVVNSATRDKDLDWITQHAAPYQVEVTVRDDLALVAVQGPEAQKKVATLLTPEQQQAIA 169 Query: 126 LLHRTWG 132 + +G Sbjct: 170 GMKPFFG 176 >gi|302554288|ref|ZP_07306630.1| glycine cleavage system T protein [Streptomyces viridochromogenes DSM 40736] gi|302471906|gb|EFL34999.1| glycine cleavage system T protein [Streptomyces viridochromogenes DSM 40736] Length = 373 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 98/305 (32%), Gaps = 55/305 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + + AR + I G IL ++ ++ E Sbjct: 54 LSHMGEITVTGPQAAALLDHALVGN-IGGVKPGRARYTMICRADGGILDDLIVYRLAETE 112 Query: 65 FILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 +++ + S +++ L + + + ++ E S D Sbjct: 113 YMVVANASNAQVVLEALVERSAGFDAEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 172 Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 + L+ RT E K ++ + Sbjct: 173 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLAPCGLSC 232 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + ++ P DA + + + K G ++G+E ++ R Sbjct: 233 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKEGDFVGREALAEAASRAEQNP 289 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 R ++ +P +G ++ IG + L A+A +D HA Sbjct: 290 PRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVD-AGHAAPGTP 348 Query: 256 ALTVH 260 + V Sbjct: 349 GVAVD 353 >gi|222099448|ref|YP_002534016.1| Aminomethyltransferase [Thermotoga neapolitana DSM 4359] gi|254797883|sp|B9K6R7|GCST_THENN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|221571838|gb|ACM22650.1| Aminomethyltransferase [Thermotoga neapolitana DSM 4359] Length = 363 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 97/287 (33%), Gaps = 60/287 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ + F+ ++T D +P A + + G I+ ++ +I + I Sbjct: 49 SHMGEIVVEGQETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGIVDDLVVYRISHEKAI 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEHTFSN----------- 112 + ++ + + + + K+ + V + ++++ + Sbjct: 109 MVVNAANIEKDYEWI---KVHAKNFNVEVRNVSDETALVAFQGPKSQETLQRVVDIDLEG 165 Query: 113 ---SSFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHEL--------------- 147 SF R VL+ RT E S K + L Sbjct: 166 IGYYSFQWGRLDGERVLVSRTGYTGEDGFELMMNAESAAKIWDTLVEIAGNVDGKPAGLG 225 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 R+ + D + P + + + + + K ++G+E + ++ + + + Sbjct: 226 ARDVCRLEASYLLYGQDM-DESTNPFEVGLSWV--VKMNKD-FVGKE--ALLKLKEKVER 279 Query: 203 RPMIITGTD-DLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 + + + + + G +L + E+G + ALA+ Sbjct: 280 KLVALELSGRRIARKGYTVLKEGKEVGKITSGNFSPTLGKSIALALV 326 >gi|307152524|ref|YP_003887908.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822] gi|306982752|gb|ADN14633.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822] Length = 376 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 53/307 (17%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE------------- 62 G+ I LQ ++ +++ + A+ + +L PQG I+ ++ E Sbjct: 68 GQDIIKQLQELVPSNLSRIQAGQAQYTVLLNPQGGIIDDIIVYYQGEKNGQQEVTLIVNA 127 Query: 63 -------------------------DTFILEIDRSKRDSLIDKLLFY-----KLRSNVII 92 + ++ + + +S + + KL ++ Sbjct: 128 ATTEKDKTWILEHISQSVEFADLSQEKALIAVQGPQAESFLQSFVKEDLSGVKLFEHLKA 187 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + G + +D + L R + LR+ Sbjct: 188 TLLDQPGFIARTGYTGEDGFEIMVDPEIA---QQLWRKLSDAGVTPCGLGARDTLRLEAA 244 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D T P +A + L + K +IG+ V+ + + + + R+ + Sbjct: 245 LALYGQDI-DDTTTPLEAGLGWLVHLKTLKEDFIGRSVLEKQKAQGVSRRLVGVEMEGRY 303 Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + G P++++ +G + ALA + + K + + K Sbjct: 304 IARHGYPVISNSKIVGEVTSGTLSPTLGIPVALAYVPTELSEVGQKLEIEIRGKTYPGKV 363 Query: 267 SFPHWYK 273 +Y+ Sbjct: 364 VKKPFYR 370 >gi|332140420|ref|YP_004426158.1| putative aminomethyltransferase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550442|gb|AEA97160.1| putative aminomethyltransferase [Alteromonas macleodii str. 'Deep ecotype'] Length = 77 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 V LS+ I + G+ A +L IT ++ L K AR A +GK ++++ Sbjct: 16 VDLSDTMVISLEGEQADSYLHGQITVNINKLDDKSARHFAHCDNKGKTWSTGYVTRL 72 >gi|168701893|ref|ZP_02734170.1| glycine cleavage system T protein [Gemmata obscuriglobus UQM 2246] Length = 358 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G + FL+ + T V T+ R + G IL L+ ++ +F Sbjct: 51 SHMARVNFDGPDVLAFLERVFTNSVATMKAGQVRYGLVCKEDGGILDDILVYRLPG-SFA 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------INGVVLSWNQEHTFS 111 ++ S R+ ++ + R+ + +E+ + V + + + Sbjct: 110 AVVNASNREKILAWFA--QQRTGLAVEVDDRTPATTMIAVQGPKAVELVAGVFADDVSAL 167 Query: 112 NSSFIDERF------------------------SIADVLLHRTWGHNEKIASDIKTYHEL 147 F + L + + + L Sbjct: 168 KYYFATPSHYLGSPCVVSRTGYTGEDGFEVIVPNALGEPLWNEFVAKGAVPCGLGARDTL 227 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ + + + P A + + L KG ++G++ + + + + I Sbjct: 228 RLEAAMPLYGHELNEG-VNPIQAGLAW--AVKLDKGDFLGRDAIQKAATATEPVRVGLEI 284 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVR 263 G G P+L +G + K+LA+ ++ A+ + + + G + Sbjct: 285 EGKRAARE-GCPVLAGGRPVGGVTSGSLCPWLDKSLAMGYVEPAAAAVGTKLEVDLRGAK 343 Query: 264 VKASF 268 + A+ Sbjct: 344 LPATV 348 >gi|117619425|ref|YP_856254.1| glycine cleavage system aminomethyltransferase T [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166221535|sp|A0KJ03|GCST_AERHH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|117560832|gb|ABK37780.1| glycine cleavage system T protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 365 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 47/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FLQ ++ DV L + A S +LTP+G ++ + + E + Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTVFGKALYSGMLTPEGGVIDDLITYYLGETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + V + +P ++ + F E+ + + Sbjct: 110 RLVVNSATREKDLAWIRHHAQDFGVTVTERPELAMIAVQGSNAKAKAAKVFSAEQNAAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + N + LR+ Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEDGYEIVVPQEQACDLWQALLDNGVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P A M + +IG+ + + K ++ Sbjct: 230 EAGMNLYGQDM-DETVSPLAANMAWTIAWEPSDRQFIGRAALEAQKAAGSQPKLVGLVME 288 Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + SG P+ + G + ++A+AR+ + D + + + Sbjct: 289 EKGVLRSGMPVTFTTAAGEEREGVITSGSFSPTLGYSIALARVPR-DIGEQASVEIRKKL 347 Query: 262 VRVKASFPH 270 V VK + P Sbjct: 348 VTVKVTKPA 356 >gi|15606995|ref|NP_214377.1| hypothetical protein aq_2005 [Aquifex aeolicus VF5] gi|14916901|sp|O67808|Y2005_AQUAE RecName: Full=Uncharacterized protein aq_2005 gi|2984242|gb|AAC07770.1| putative protein [Aquifex aeolicus VF5] Length = 149 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 18/130 (13%) Query: 1 MSSVYLSNQSFIKVCG-------------KSAIPFLQAIITADVLTLPYKIARGSAILTP 47 M + L +S IKV G + FL ++T D+ +L + L Sbjct: 1 MKWIDLK-RSKIKVYGKPVKMLMKGLTAPEEHTHFLHGLLTNDIKSLKPYTFNYNLWLKQ 59 Query: 48 QGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWN 105 G+ + F + KI +D +IL+ + D +I++ KL V E N V + Sbjct: 60 NGQPIADFFVYKI-KDYYILDTEEP-ADFVINEFNRLKLSLKVYFEDLTPNYKHVFIYGE 117 Query: 106 QEHTFSNSSF 115 F F Sbjct: 118 GAEEFVKEKF 127 >gi|291457947|ref|ZP_06597337.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419491|gb|EFE93210.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 363 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 101/309 (32%), Gaps = 54/309 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ LQ ++T + + AR S + +G + ++ K E+ + Sbjct: 51 SHMGEVLCQGPDALANLQKLLTNNFDNMVDGQARYSLMCNEKGGCVDDLIVYKRGENDYF 110 Query: 67 LEIDRSKRDSLIDKLL--------------------------FYKLRSNVIIEIQ-PING 99 + ++ + +D +L LR + E P Sbjct: 111 IVVNAANQDKDFQWMLDHQFGDAKFTNVSKDYAQIALQGPKAMEILR-KLTTEDNIPKKY 169 Query: 100 VVLSWNQE------------HTFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTY 144 +N E +T + + A+ + + ++ I + Sbjct: 170 YHAVFNAEVAGMPCIVSKTGYTGEDGVELYLENQYAEKMWDKLLEAGKEEGLIPCGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KR 203 LR+ + + I P + ++ + + K +IG+ + I+ + + KR Sbjct: 230 DTLRMEAAMPLYGHEM-NDEITPLETGLNF--AVKMDKPDFIGK---AAIEAKGEPKIKR 283 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 + + +L D +G +A+A +D + + + ++V Sbjct: 284 VGLKVTGRGVIREAEDVLADGKVVGHTTSGTHCPFLGYPVAMALVDPKYSEVGQKLEVSV 343 Query: 260 HGVRVKASF 268 G V+A Sbjct: 344 RGRSVEAEV 352 >gi|21674602|ref|NP_662667.1| glycine cleavage system T protein [Chlorobium tepidum TLS] gi|31340145|sp|Q8KBJ9|GCST_CHLTE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|21647801|gb|AAM73009.1| glycine cleavage system T protein [Chlorobium tepidum TLS] Length = 365 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF Sbjct: 49 SHMGNFYVRGARALEFLQYMTTNDLAKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTF--------------- 110 L ++ S + D L + V +E +++ +F Sbjct: 109 LIVNASNCEKDFDWLSSHIGQFEGVALENHTSELSLIALQGPKSFDILARVFPGAGIDKL 168 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTY------------------- 144 + FI F A++++ RT E + + Sbjct: 169 GSFHFIKLPFEGAEIMVARTGYTGEAGVEICLPNERAVALWSALMEAGKSDGIQPIGLGA 228 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + + P +A + + + L K +IG++ +++ RK Sbjct: 229 RDTLRLEMGYSLYGHEIERD-VNPLEARLKWV--VKLNKPNFIGKQACEQVEI--NPRKS 283 Query: 204 PMIITGTD-DLPPSGSPILTDDI-EIGTLGV 232 + + +P + D EIG + Sbjct: 284 VVGFSLEGRAIPRQHFKVYNSDKQEIGEVCS 314 >gi|302522038|ref|ZP_07274380.1| glycine cleavage system T protein [Streptomyces sp. SPB78] gi|302430933|gb|EFL02749.1| glycine cleavage system T protein [Streptomyces sp. SPB78] Length = 379 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 100/298 (33%), Gaps = 57/298 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT Sbjct: 57 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 115 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100 +++ + S +++D L Y L R I ++G+ Sbjct: 116 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 175 Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143 + + + R A + WG + + + Sbjct: 176 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 235 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + + + P DA + + + K G ++G+ + + Sbjct: 236 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKTSNEGRFVGRAALEAAAEKAA 292 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 RK +I +P +G ++ D +G + K LA+A +D A Sbjct: 293 STPPRKLVGLIAAGRRVPRAGYAVVADGRVVGEVTSGAPSPTVGKPLAMAYVDAAHAA 350 >gi|256825451|ref|YP_003149411.1| glycine cleavage system aminomethyltransferase T [Kytococcus sedentarius DSM 20547] gi|256688844|gb|ACV06646.1| aminomethyltransferase [Kytococcus sedentarius DSM 20547] Length = 372 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 99/315 (31%), Gaps = 57/315 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A F+ + T D+ + A+ + P G ++ + ++ + Sbjct: 56 SHMGKVRVSGPRAADFVNSCFTNDLKRIEPGKAQYTMCCAPDGGVIDDLIQYLRSDEDVL 115 Query: 67 LEIDRSKRDSLIDKLLFYKL-RS-NVIIEIQPINGVVLSWNQE-------------HTFS 111 L + S + + L R+ V + + +++ H Sbjct: 116 LVPNASNATEVAELLTAEAADRAPGVTVSDEHTQHGIIAVQGPKADEVMAELGLPTHHPD 175 Query: 112 NSSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 SF+D ++ +V++ R+ EK + + + Sbjct: 176 FMSFLDAQWESHEVVVCRSGYTGEKGYEIICPWDATPALWEALVAAAEERGGLPAGLGAR 235 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--RIQHRNIIRK 202 LR G + + K + G E ++ R + Sbjct: 236 DTLRTEMGYPLHGHELSREISPVMARNAW---AVGWDKESFWGSEALAEQRAAKSGRLN- 291 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257 R + +TG +P G+ I ++ IG + + IA +D+ H + + Sbjct: 292 RGLKVTGRG-IPREGNEIKDSEGTVIGVVTSGTFSPTLGHGIGIALVDR-SHTFGDQVVI 349 Query: 258 TVHG--VRVKASFPH 270 V G V + P Sbjct: 350 DVRGREVPAELVKPP 364 >gi|320165309|gb|EFW42208.1| dimethylglycine dehydrogenase [Capsaspora owczarzaki ATCC 30864] Length = 863 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 88/295 (29%), Gaps = 66/295 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + +V G A FLQ ++ +P + +L +G I++ DT+ Sbjct: 521 TSFAKFQVQGADAERFLQRTAAGNMA-VPIGKVVYTGMLNNRGGYETDVTITRTAADTYF 579 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVII-EIQPINGVVLSWN---------------QEHT 109 + ++ +D + L V I ++ V++ T Sbjct: 580 VVSPTAQAVRDLDWMNKSILPDERVSITDVTSAYAVIVVMGPNSRTLLSRLQSPKCDSPT 639 Query: 110 FSNSSFIDERFSIA--------------------DVLLHRTWGHNE-------------- 135 NS F + F L + E Sbjct: 640 SENSVFASKNFPFGTSQLVDLGFTTIRATRVTYVGELGWELYVPQEMACSLFDEILAAGK 699 Query: 136 KIASDIKTY---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 ++ + Y LRI G + S + P +A + + + KG ++G+E + Sbjct: 700 DLSVALGGYYAIDSLRIEKGYRAWGAELT-SEVTPIEAGLSF--AVDMNKGDFVGREALV 756 Query: 193 RIQHRNIIRKRPMIITGTDDLPP-------SGSPILTDDIEIGTLGVVVGKKALA 240 + + KR + D P I+ D +G + A+ Sbjct: 757 AQKKSG-VSKRLVSFMVDDGAEPGDHACMWGDEAIVRDGKVVGFITSASYGYAVG 810 >gi|89055340|ref|YP_510791.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1] gi|88864889|gb|ABD55766.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1] Length = 812 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 100/318 (31%), Gaps = 58/318 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S+ I+V G A FL I ++ ++P + L +G I I+++ + Sbjct: 484 LYDMSSFGKIRVDGPDAEAFLNRIAAGNM-SVPVGKIVYTQFLNMRGGIEADVTITRLAQ 542 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQ----------EHTF 110 D++ + + + L + R V+I +I V+ H + Sbjct: 543 DSYFIVTPAATLIRDMAWLKMNR-RDEVVILSDITASEAVICVMGPNSRALMQSVSPHDW 601 Query: 111 SNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146 SN++F R + L + ++ A +T HE Sbjct: 602 SNAAFPFGVAQQVDIGLGIARAHRVTYVGELGWELYVSADQAAHVFETLHEAGADHGLRL 661 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI D +A + +S TK +IG + V+R + Sbjct: 662 CGLHMMDSARIEKAFRHFGHDITGEDHV-IEAGLGF--AVSKTKNNFIGADAVARKRDEG 718 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249 + + +T + + PI+ + + + G + + Sbjct: 719 LQMRMVQFKLTDPEAMLFHAEPIIRNGEVVSYITSGNYGHTLGGAIGMGYVPCPGETPAE 778 Query: 250 AIKKGMALTVHGVRVKAS 267 + + V G RV A Sbjct: 779 MLASAYEIEVAGTRVAAE 796 >gi|254774951|ref|ZP_05216467.1| glycine cleavage system aminomethyltransferase T [Mycobacterium avium subsp. avium ATCC 25291] Length = 367 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + +++D Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + ++++ L RS ++ +Q V+ ++ Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTISNLHRSYAVLAVQGPRSADVLAELGLPTDMDYMAY 174 Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148 D F V + RT W + + LR Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + P I P A I K + G++ + + R+ R + Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L +G +L D +G +A+A ID D ++ G +TV Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALID-TDADVRDGQEVTVEVR 348 Query: 261 --GVRVKASFPH 270 + P Sbjct: 349 GRAATCEVVRPP 360 >gi|296166085|ref|ZP_06848530.1| glycine cleavage system T protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898494|gb|EFG78055.1| glycine cleavage system T protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 365 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A F+ + +T D+ + A+ + T G ++ + +++D Sbjct: 53 SHLGKALIRGPGAAEFVNSTLTNDLSRIGPGKAQYTLCCTESGGVIDDLIAYYVDDDEIF 112 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + ++++ L RS ++ +Q V+ + Sbjct: 113 LVPNAANTAAVVEALQGVVRPGLTITNEHRSYAVLAVQGPRSADVLDGLGLPTGMDYMGY 172 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D ++ V + RT E + + LR Sbjct: 173 ADATYAGVPVRVCRTGYTGEHGYELLPPWDSAAVVFDALAGAVAAAGGEPAGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A I K + G++ + + R+ R + Sbjct: 233 TEMGYPLHGHELALD-ISPLQARCGW--AIGWKKDAFFGRDALLAEKVAG-PRRLLRGLR 288 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L + +G +A+A ID D I+ G +TV Sbjct: 289 MVGRGVLRP-GLTVLAGETPVGVTTSGTFSPTLQVGIALALID-ADAGIEDGQRVTVDIR 346 Query: 261 --GVRVKASFPH 270 + P Sbjct: 347 GRAAECEVVRPP 358 >gi|207744781|ref|YP_002261173.1| aminomethyltransferase (glycine cleavage system tprotein) [Ralstonia solanacearum IPO1609] gi|206596191|emb|CAQ63118.1| aminomethyltransferase (glycine cleavage system tprotein) [Ralstonia solanacearum IPO1609] Length = 337 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F Sbjct: 13 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 72 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + + +V Q I R S + Sbjct: 73 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTIAPRRSDNNA 110 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + KTY L P T + + P +A ++G+ Sbjct: 111 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFAAIDGV------ 156 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 157 --GEIMVARTGYTG 168 >gi|238060345|ref|ZP_04605054.1| glycine cleavage system aminomethyltransferase T [Micromonospora sp. ATCC 39149] gi|237882156|gb|EEP70984.1| glycine cleavage system aminomethyltransferase T [Micromonospora sp. ATCC 39149] Length = 376 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 88/298 (29%), Gaps = 49/298 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ +V G A F+ ++ D+ + A+ + G ++ + +D Sbjct: 63 SHLGKARVTGPGAADFVNVCLSNDLGRIGPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 122 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106 L + + ++ +L V++ + VL+ Sbjct: 123 FLVPNAANTAEVVRRLRA-AAPERVVVTDEHEEHAVLAVQGPRSAELLGALGLPTDHGYM 181 Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146 T + + R L + + +A+ + Y Sbjct: 182 SFRAGTLAGAELTVCRTGYTGELGYELVVPAGHAVAVWDALAATGEAYELRACGLAARDT 241 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR G D P I P A + K + G++ + + R + Sbjct: 242 LRTEMGYPLHGQDLSPE-ITPVQARSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGL 298 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 +P G + D +GT+ K+ +A+A +D + +G + V Sbjct: 299 TAVDRAIPRPGMKLYVGDACVGTVTSGTFSPTRKQGIALALVDTAAD-LAEGDTVEVD 355 >gi|13540889|ref|NP_110577.1| aminomethyltransferase (glycine cleavage system T protein) [Thermoplasma volcanium GSS1] Length = 362 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 108/319 (33%), Gaps = 65/319 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FL + V +L +A L +G+++ ++ ++ D++ Sbjct: 51 SHMGDITVRGREAGKFLDHMFPTKVSSLNDGECIYTAFLNEKGQMIDDTIVYRMSSDSYF 110 Query: 67 -----------------------------------LEIDRSKRDSLIDKLLF----YKLR 87 + + + +S+I +L F Y Sbjct: 111 FVPNAGTTDKIYEWVTKNSKGFDVKIENVSSKISSIALQGPESESVISELGFSYPGYFKF 170 Query: 88 SNVIIE----IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASD 140 + V + I N +++S FI A L + EK + Sbjct: 171 TYVNGKYKNAITGKNDIIISGTGYTGEKGVEFIIPN-EYAVELWRKLLSLVEKRSGLPCG 229 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQEVVSRIQHR 197 + + LR+ G++ DF + P++A IS G +IG++ S R Sbjct: 230 LGSRDTLRMEKGMLLSGHDFNENRD-PYEA------SISFIVNNDGDFIGKK--SLEDRR 280 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK--VDHAI 251 ++ +D +P SG+ + + +GTL K +A+ IDK Sbjct: 281 KEDKQIFRGFILSDGIPRSGNSVKVNGKVVGTLTSGSISPVLNKGIALGYIDKEYSKEGT 340 Query: 252 KKGMALTVHGVRVKASFPH 270 K + + S P Sbjct: 341 KVFVEIRGKDHEATVSRPK 359 >gi|14324271|dbj|BAB59199.1| aminomethyltransferase [Thermoplasma volcanium GSS1] Length = 359 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 108/319 (33%), Gaps = 65/319 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FL + V +L +A L +G+++ ++ ++ D++ Sbjct: 48 SHMGDITVRGREAGKFLDHMFPTKVSSLNDGECIYTAFLNEKGQMIDDTIVYRMSSDSYF 107 Query: 67 -----------------------------------LEIDRSKRDSLIDKLLF----YKLR 87 + + + +S+I +L F Y Sbjct: 108 FVPNAGTTDKIYEWVTKNSKGFDVKIENVSSKISSIALQGPESESVISELGFSYPGYFKF 167 Query: 88 SNVIIE----IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASD 140 + V + I N +++S FI A L + EK + Sbjct: 168 TYVNGKYKNAITGKNDIIISGTGYTGEKGVEFIIPN-EYAVELWRKLLSLVEKRSGLPCG 226 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQEVVSRIQHR 197 + + LR+ G++ DF + P++A IS G +IG++ S R Sbjct: 227 LGSRDTLRMEKGMLLSGHDFNENRD-PYEA------SISFIVNNDGDFIGKK--SLEDRR 277 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK--VDHAI 251 ++ +D +P SG+ + + +GTL K +A+ IDK Sbjct: 278 KEDKQIFRGFILSDGIPRSGNSVKVNGKVVGTLTSGSISPVLNKGIALGYIDKEYSKEGT 337 Query: 252 KKGMALTVHGVRVKASFPH 270 K + + S P Sbjct: 338 KVFVEIRGKDHEATVSRPK 356 >gi|17548010|ref|NP_521412.1| glycine cleavage system aminomethyltransferase T [Ralstonia solanacearum GMI1000] gi|24636858|sp|Q8XUA0|GCST_RALSO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|17430316|emb|CAD17081.1| probable aminomethyltransferase (glycine cleavage system tprotein) [Ralstonia solanacearum GMI1000] Length = 375 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ ++ L A + +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNIDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + I+ + Q I R S + Sbjct: 111 RLVVNAGTAPTDIEWIT----------------------AQNAAAGTGVAITPRRSDNNA 148 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + K Y L P T + + P +A ++G+ Sbjct: 149 GAEPLGIVAVQGPNARAKAYAAL--------PGTQAVGEALKPFNAGFATIDGV------ 194 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 195 --GEIMVARTGYTG 206 >gi|149204829|ref|ZP_01881791.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. TM1035] gi|149141699|gb|EDM29754.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. TM1035] Length = 815 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 98/318 (30%), Gaps = 58/318 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S+ ++V G A FL + AD+ ++ + L +G I ++++ E Sbjct: 487 LYDMSSFGKLRVEGAGAEAFLNHVCGADM-SVAPGRIVYTQFLNAKGGIEADVTVTRLSE 545 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLS-----------------W 104 +++ + R + L + V+I ++ GV+ Sbjct: 546 TAYLVVTPAATRLADETWLRRHVGAHPVVITDVTAGEGVLAVMGPNARDLLRAVSPDDFS 605 Query: 105 NQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL--------- 147 N H F + I+ R S L + + + H Sbjct: 606 NDAHPFGQARQIEIGMGVARAHRVSYVGELGWEIYVSADMCGHVFEVLHAAGADHGLRLC 665 Query: 148 --------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 RI D +A + ++ K +IG+E V + Sbjct: 666 GMHAMDSCRIEKAFRHFGHDITCEDHV-LEAGLGF--AVATGKADFIGREAVL-AKRAAG 721 Query: 200 IRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249 + +R + TD P P+L D +G L G L + + Sbjct: 722 LERRLVQFRLTDPEPMLYHNEPLLRDGEIVGYLSSGAYGHHLGGAMGLGYVPCAGESAEQ 781 Query: 250 AIKKGMALTVHGVRVKAS 267 + + V GVRVKA Sbjct: 782 VLASSYEVDVAGVRVKAE 799 >gi|296389147|ref|ZP_06878622.1| glycine cleavage system T protein [Pseudomonas aeruginosa PAb1] Length = 373 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|107101893|ref|ZP_01365811.1| hypothetical protein PaerPA_01002938 [Pseudomonas aeruginosa PACS2] Length = 373 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|313110641|ref|ZP_07796515.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016] gi|310883017|gb|EFQ41611.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016] Length = 373 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQECYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|110639205|ref|YP_679414.1| glycine cleavage system aminomethyltransferase T [Cytophaga hutchinsonii ATCC 33406] gi|110281886|gb|ABG60072.1| aminomethyltransferase [Cytophaga hutchinsonii ATCC 33406] Length = 369 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ +Q I T D LP + +A+ P+G I+ L+ I E+++ Sbjct: 56 SHMGEFTLKGPKALEVIQRITTNDASVLPIGKVQYTALTNPKGGIIDDLLVYHIGEESYY 115 Query: 67 LEIDRSKRDS----LIDKL----------------------LFYKLRSNVI--------- 91 + ++ S + + L +++ + + Sbjct: 116 IVVNASNIEKDKAWFLKNLAAEGADFQDISENTCLFAVQGPKAHEVLAQLTTYPVAGMEY 175 Query: 92 -----IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDIKTY 144 +E+ V+++ DV L + + Sbjct: 176 YSCAHMELAGHKDVLVATTGYTGAGGFEVYVSNDIAKDVWTKLMQAGEAVGMKPVGLGAR 235 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D T P +A + + TK + G +++ + + R+ Sbjct: 236 DTLRLEMGYCLYGNDITDETT-PLEAGLGWI--TKFTK-TFTGSDILQEQKKNGVARQLV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 +P + +IG + K + + ++K A + + + Sbjct: 292 GFEMIERGIPRGHYELADAAGNKIGEVTSGTQSPCLGKGIGMGYVEKKYAAAGTELFVNI 351 Query: 260 HGVRVKASF 268 G +KA Sbjct: 352 RGKLIKAQV 360 >gi|163739830|ref|ZP_02147237.1| FAD dependent oxidoreductase, putative [Phaeobacter gallaeciensis BS107] gi|161386864|gb|EDQ11226.1| FAD dependent oxidoreductase, putative [Phaeobacter gallaeciensis BS107] Length = 816 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 96/315 (30%), Gaps = 56/315 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G A FL I A++ ++P + L +G I ++++ E + Sbjct: 491 MSSFGKIRVEGPDAEIFLNYICGANL-SVPAGKIVYTQFLNARGGIEADVTVTRLSETAY 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 ++ R + ++ + V+I ++ GV+ Sbjct: 550 LVVTPAVTRLTDQTWMMRHVGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNAV 609 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 QE R + L + + +T HE Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSADMAGHAFETLHEAGQDMGLKLCGMH 669 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D DA + + K +IG+ V + + + Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKADFIGKSAVLARKETGPMNR 726 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA--------RIDKVDHAIKK 253 +T ++ L PI+ D +G L LA A + + Sbjct: 727 MLQFKLTESEPLLFHNEPIIRDGKYVGYLSSGNYGHTLAAAIGMGYVPCEGESAADVLGS 786 Query: 254 GMALTVHGVRVKASF 268 + V GV+VKA Sbjct: 787 SYEIDVCGVKVKAEV 801 >gi|116050390|ref|YP_790793.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa UCBPP-PA14] gi|115585611|gb|ABJ11626.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa UCBPP-PA14] Length = 373 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|326387705|ref|ZP_08209311.1| glycine cleavage system aminomethyltransferase T [Novosphingobium nitrogenifigens DSM 19370] gi|326207751|gb|EGD58562.1| glycine cleavage system aminomethyltransferase T [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 110/306 (35%), Gaps = 49/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G L+A++ D+ L R S +L +G IL +++ D Sbjct: 59 SHMGQLVFSGDDVAEALEALLPGDIRGLKPGRMRYSLLLDDKGGILDDLIVTNTG-DALA 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQEHTF- 110 + ++ + ++ + + + L ++V++ Q + + LS + F Sbjct: 118 MVVNGAMVEADVAHIRAH-LPASVVLHHITDHALLALQGPSSAQVLEAIGLSGPGQLGFM 176 Query: 111 --------------SNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 S S + E +I L+ H+E + LR+ Sbjct: 177 EWGRFEWHGASLGVSRSGYTGEDGFEISVPHAILAELVDVLAAHDEVHPIGLGARDSLRL 236 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ D S I P +A + +G + G ++ + + +R ++ Sbjct: 237 EAGLPLYGHDLT-SKIEPVEAGLGFAVARRRREQGGFPGHGRIAAVLEQGPACRRVGLLV 295 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262 G+ +L D IGT+ G A +A+A +D A+ +++ + G Sbjct: 296 EGRLAAREGAVVLAGDTPIGTVTS--GGFAPTLGRPIAMAYVDAAHAALDTPLSIDLRGR 353 Query: 263 RVKASF 268 R+ A+ Sbjct: 354 RLAATV 359 >gi|309790894|ref|ZP_07685437.1| glycine cleavage system T protein [Oscillochloris trichoides DG6] gi|308227082|gb|EFO80767.1| glycine cleavage system T protein [Oscillochloris trichoides DG6] Length = 351 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 98/311 (31%), Gaps = 55/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FLQ I+T+DV + + + + P G I+ I + E+ F+ Sbjct: 37 SHMGRFMVRGPQAEEFLQYIVTSDVSAIALGQSTYALLCQPDGGIIDDLFIYHLPEE-FL 95 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD-- 124 + + S R+ + + ++ +EI + + + + S A Sbjct: 96 VVANASNRERVWHWFQEHA--ADFDVEIVGRSERWAMLALQGPGAEDLLVQAEESEAGSL 153 Query: 125 -----------------VLLHRTWGHNEK---------IASDIK--------------TY 144 L+ RT E A D Sbjct: 154 GSMPFHGVALSSLFGFTTLVARTGYTGEDGFELFFDAIHAEDFWDKLVALGAKPCGLGAR 213 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR + + TI P++A + + + L KG ++G+ ++ I+ R + R+ Sbjct: 214 DSLRFEPCLALYGHEI-SDTINPYEARLGWV--VKLDKGDFVGRSALAAIKERGVSRRLT 270 Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMAL 257 + P+ +G + V +A + + + + Sbjct: 271 GFEMVGKGIARGDYPVHNLAGELVGFVTTGMPAPTVGRPLGMAYVPTELSREGSEFDIII 330 Query: 258 TVHGVRVKASF 268 VR +A Sbjct: 331 REKPVRARAIR 341 >gi|262173541|ref|ZP_06041218.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio mimicus MB-451] gi|261890899|gb|EEY36886.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio mimicus MB-451] Length = 376 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 105/310 (33%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D Sbjct: 57 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117 + ++ + ++ I L + L ++V +E+ ++ + +N F+D Sbjct: 116 VVVNAACKEQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVANMLFMD 174 Query: 118 ERF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + A L R E + LR+ Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 294 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + +IG + ++A + + + Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVR 354 Query: 259 VHGVRVKASF 268 + + Sbjct: 355 GKMLPMTVEK 364 >gi|160942432|ref|ZP_02089739.1| hypothetical protein CLOBOL_07316 [Clostridium bolteae ATCC BAA-613] gi|158434684|gb|EDP12451.1| hypothetical protein CLOBOL_07316 [Clostridium bolteae ATCC BAA-613] Length = 362 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 100/307 (32%), Gaps = 50/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ + I+T D + R S + G ++ ++ + ++ ++ Sbjct: 51 SHMGEVLFEGPDALKNINYILTNDFTNMYDGQVRYSVMCYEDGGVVDDLIVYRYNQEKYL 110 Query: 67 LEIDRSKRDS----LIDKLLFYKLR-------SNVII-------------EIQPINGVVL 102 + ++ + R+ + D L + S + I + + I Sbjct: 111 VVVNAANREKDVNWMKDHLNGDVVFTDISDELSQLAIQGPNADAILRKLTKDEDIPEKYY 170 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYH 145 S+ E I + + + +NE I + Sbjct: 171 SFVPEGIVGGIKCIVSQTGYTGESGYELYVNNEDAPKLWNMLLEAGEAEGLIPCGLGARD 230 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + + + I P + + + + K +IG++ + + + RKR Sbjct: 231 TLRLEAAMPLYGHEM-DAAIHPLETGLKF--AVKMQKDDFIGKK--ALEEKSVLTRKRVG 285 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + + + D E+G A+A+A +D I + + V G Sbjct: 286 LRMIGRGIARENEKVYAGDREVGWTTSGTHCPFLGYAIAMAILDLDCTEIGTKVEVEVRG 345 Query: 262 VRVKASF 268 R++A Sbjct: 346 RRIEAEV 352 >gi|126730411|ref|ZP_01746222.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula stellata E-37] gi|126709144|gb|EBA08199.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula stellata E-37] Length = 814 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 102/317 (32%), Gaps = 58/317 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S+ ++V G+ A FL + DV +P + L +G I ++++ E Sbjct: 486 LYDMSSFGKLRVEGRDAAAFLNHVCGGDVD-VPAGRIVYTQFLNARGGIEADVTVTRLSE 544 Query: 63 DTFILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQ----------EHTFS 111 F++ + R + L + R+ VI ++ V+ + FS Sbjct: 545 TAFLVVTPAATRRADETWLRRHVGDRNAVIADVTAGEAVIAVMGPRARAVLEGCSDGDFS 604 Query: 112 NSS--FIDER---FSIADVLLHRT-------WGHNEKIASDIKTYHELRINHGIVDP--- 156 N++ F R + + +HR W + + L + G + Sbjct: 605 NATNPFGTARQVHVGMGEARVHRVSYVGELGWEVYASADMAVHVFDAL-MAAGEPEGLRL 663 Query: 157 ------------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 D +A + + K +IG++ V + Sbjct: 664 CGLHAMDSCRAEKAFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLAKREAG 720 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249 + R+ ++T + L PIL D +G L G L + D Sbjct: 721 LDRRLVQFLLTDPEPLLYHNEPILRDGEIVGHLSSGAYGHALGGAIGLGYVPCTGESADA 780 Query: 250 AIKKGMALTVHGVRVKA 266 + + V GVRV A Sbjct: 781 LLSSAFEIDVAGVRVAA 797 >gi|302851348|ref|XP_002957198.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f. nagariensis] gi|300257448|gb|EFJ41696.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f. nagariensis] Length = 420 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 51/307 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK AI FL+ ++ D+ L S QG I+ +I+K+ Sbjct: 88 SLFDVSHMCGLTLKGKDAIKFLEGLVVGDIAGLKDGTGSLSVFTNEQGGIIDDTVITKVN 147 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSS-- 114 + ++ RD + L + + V + + ++ + Sbjct: 148 GQEIYVVVNAGCRDKDLAHLDKHLQAAKSKGLDVALTVHDDRSLLALQGPAAKDVLGALA 207 Query: 115 ---------FIDER-FSIADVLLHRT---------------WGHNEKIASDIKTYHE--- 146 F D R F +A + T H +A + Sbjct: 208 PGVDLAAMYFSDFRTFDVAGIPCWVTRTGYTGEDGFEISVPSTHAVALAEKLTASERVRL 267 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 LR+ G+ D ++ P +A + G +G ++G +V+ + Sbjct: 268 AGLGPRDSLRLEAGLCLYGNDL-NESLTPVEAGLAWTIGKRRREGFDFLGGDVIKKQLAE 326 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 + ++R ++ D +G + L A+ ++K K Sbjct: 327 GVSKRRVGFVSSGAPARQHSVISTPDGQVVGEVTSGAFSPCLKKNIAMGYVEK--DFSKP 384 Query: 254 GMALTVH 260 G L V Sbjct: 385 GTQLKVE 391 >gi|189500941|ref|YP_001960411.1| glycine cleavage system aminomethyltransferase T [Chlorobium phaeobacteroides BS1] gi|189496382|gb|ACE04930.1| glycine cleavage system T protein [Chlorobium phaeobacteroides BS1] Length = 403 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ FLQ + T D L A+ + +L G I+ ++ +++ +T+ Sbjct: 85 SHMGSFYVRGDRALEFLQHMTTNDASVLKNGQAQYTLMLYSDGGIVDDLIVYRVDHETWF 144 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------F 110 + ++ R + L + V IE + +++ + Sbjct: 145 IVVNAGNRQKDFEWLSGHIQDFEGVAIEDHSESLSLIALQGPKSKHILQRVLASSVCEQL 204 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKT 143 F+ F ++++ T EK + Sbjct: 205 PAFHFLRTDFEGTEIMVACTGYTGEKGVEISVPDQSAELLWKTIIKEGEAFDIQPVGLGA 264 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + T P + + + L KG +IG+E + K Sbjct: 265 RDTLRLEMGYPLYGHEITRET-NPMETRLRWV--TKLEKGEFIGREACVEAER--NPEKT 319 Query: 204 PMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232 + + + P +L DD E+GT+ Sbjct: 320 LVGFSMEERAIPRQGYVLYDRDDNEVGTVCS 350 >gi|119504914|ref|ZP_01626991.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080] gi|119459200|gb|EAW40298.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080] Length = 406 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 88/295 (29%), Gaps = 62/295 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A+ L ++T D+ L A G+++ I ++ E F+L Sbjct: 77 IEGADALAMLDRMVTRDLNKLRINRVTYVAWCNDSGRMIDDGTIFRLGESKFLLTCGSPC 136 Query: 74 RDSLID-KLLFYKLRSNVI----IEIQPING-----VVLSWNQEHT------------FS 111 L L F +L S V + + G V+ + E T F+ Sbjct: 137 LAWLRKSALGFNRL-SIVEHTEALAALSLQGPTSFAVLKAMGLEATSALKPFDIGHYPFA 195 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHE----------------LRINHGI 153 + R L + W +A + Y R+ G Sbjct: 196 EGEIMISRTGFTGDLGYELWIE-PNLALTLWDCLYEAGANYGIQPYGEAATNMARLEAGF 254 Query: 154 VDPNTDFLPS--------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 + P +F + P + + L + K + G+ + + Sbjct: 255 IMPYMEFNEALKTVNFEYDQTPLELDLAWL--VDFKKPHFNGRRALLEQHKTG-PKTLLT 311 Query: 206 IITGTDDLPPSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAI 251 + + P + + +D EIG + V ALA+ ++ + I Sbjct: 312 KLNIEGNKPAEEALLYSDHDCGDEIGYVTSAMWSPSVKANIALAMINVEALSGDI 366 >gi|149179150|ref|ZP_01857719.1| aminomethyltransferase [Planctomyces maris DSM 8797] gi|148842010|gb|EDL56404.1| aminomethyltransferase [Planctomyces maris DSM 8797] Length = 365 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 92/270 (34%), Gaps = 49/270 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + G A FL ++T V +L R S + G IL L+ + D ++L Sbjct: 54 HMGRLFFTGPDACRFLDRLLTNSVESLKPGQIRYSLVTNESGGILDDVLVYRFS-DFYML 112 Query: 68 EIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115 ++ S R ++D + RS +V IE Q + +L+ + + + Sbjct: 113 VVNASNRLKIVDWIE--GQRSGFDVRIEDQTRDKFMLALQGPQSLAILNPLVEAELSEIK 170 Query: 116 ----IDERFSIADVLLHRTWGHNE-------KIASDIKTY-------------------- 144 I+ R S D L+ RT E + + Sbjct: 171 YYYGIETRVSGVDALVSRTGYTGEDGFEVVLDQSEGAALWERLIAGGEPSGLIPAGLGCR 230 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ + + + P+ A ++ + L +IG+E + + R+ + R Sbjct: 231 DTLRLEAAMPLYGHEL-DESTDPYTAGLNF--AVKLKAADFIGKEALIAAKARDDRKVRV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 GS + + D ++G + Sbjct: 288 GFTLEGKRAAREGSLLFSGDQQVGMVTSGS 317 >gi|49088832|gb|AAT51611.1| PA2442 [synthetic construct] Length = 374 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADVALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + G+ Sbjct: 292 GFLPQGRMPVREGAEIIDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSGVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|41408049|ref|NP_960885.1| glycine cleavage system aminomethyltransferase T [Mycobacterium avium subsp. paratuberculosis K-10] gi|59797820|sp|Q73YK4|GCST_MYCPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|41396404|gb|AAS04268.1| GcvT [Mycobacterium avium subsp. paratuberculosis K-10] Length = 367 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 58/314 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + +++D Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + ++++ L RS ++ +Q V+ ++ Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTVRNLHRSYAVLAVQGPRSANVLAELGLPSDMDYMAY 174 Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148 D F V + RT W + + LR Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + P I P A I K + G++ + + R+ R + Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + G L +G +L D +G ALA+ D ++ G +TV Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALINTD---ADVRDGQEVTVD 346 Query: 261 ----GVRVKASFPH 270 + P Sbjct: 347 VRGRAATCEVVRPP 360 >gi|207722208|ref|YP_002252645.1| aminomethyltransferase (glycine cleavage system tprotein). (partial sequence c terminus) [Ralstonia solanacearum MolK2] gi|206587383|emb|CAQ17966.1| aminomethyltransferase (glycine cleavage system tprotein). (partial sequence c terminus) [Ralstonia solanacearum MolK2] Length = 357 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F Sbjct: 33 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + + +V Q I R S + Sbjct: 93 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTITPRRSDNNA 130 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + KTY L P T + + P +A ++G+ Sbjct: 131 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATVDGV------ 176 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 177 --GEIMVARTGYTG 188 >gi|326332994|ref|ZP_08199250.1| sarcosine oxidase, alpha subunit [Nocardioidaceae bacterium Broad-1] gi|325949188|gb|EGD41272.1| sarcosine oxidase, alpha subunit [Nocardioidaceae bacterium Broad-1] Length = 636 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 98/335 (29%), Gaps = 72/335 (21%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I+V G A FL I T L AR + TP G + + +I Sbjct: 296 MDATTL---GKIEVWGSDAGEFLNRIYTNAFKKLAPGSARYGVMCTPDGMMFDDGVTLRI 352 Query: 61 EEDTFILEIDRSKRDSLIDKL---------LFYKLRSNVI-------------------- 91 +E + + ++D L ++V Sbjct: 353 DEGRYFMTTTTGGAAKVLDWLEEWHQTEWPTLDVSFTSVTEQWATVAVVGPRSREVIAKI 412 Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIA 138 +++ +++ + S R S + L + W Sbjct: 413 APDLDVSNEAFPFMTFRETTLASGIPARVCRISFSGELAFEVNVETWFGPQVWKEIHAAG 472 Query: 139 SDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 + +T H LR G D T+ P DA M+ + +S K ++G+ Sbjct: 473 QEWAITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FVGKRSY 528 Query: 192 SRIQHRNIIRKRP---------MIITGTDDLPPSGSPILTDDIEI---GTLGVVVGKKAL 239 SR RK + L +G+PI D + G + AL Sbjct: 529 SRADTSRTDRKHLVSVLPVDKSFRLPEGTQLVEAGTPITPADGPVPMLGHVTSSYHSAAL 588 Query: 240 ----AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 A+A I + I + + V V Sbjct: 589 GRSFALALIKDGRNRIGQTLVAPVGDRLVDVVVAE 623 >gi|294084485|ref|YP_003551243.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Puniceispirillum marinum IMCC1322] gi|292664058|gb|ADE39159.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus Puniceispirillum marinum IMCC1322] Length = 384 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 105/309 (33%), Gaps = 64/309 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69 +++ G A F+Q + D+ + + +G +L ++ ++ E+ F + Sbjct: 71 VEITGPDASRFVQMLSPRDISKCAVGQCKYVILTNEKGGVLNDPVMLRLGENHFWFSLAD 130 Query: 70 ----------------DRSKRDSLIDKLLF---------YKLRSNVIIEIQPINGVVLSW 104 D + + + L + L +V+ +++ W Sbjct: 131 SDILFWAQGVAVNAGMDVTITEPDVSPLQLQGPRSGEIAHALFGDVVSDLR------YYW 184 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------- 147 E F + R + L + + + + + + Sbjct: 185 LAELEFEGIPLVVSRTGWSSELGYEIYLRDGSKGD--QLWEAIMKAGAPFGLKPGHTSSI 242 Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI G++ + D +T P + +D L + + +IG+ +++I+ + RK+ + Sbjct: 243 RRIEGGMLSYHADMDINT-NPFELGLDRLIDLDMDAD-FIGKAALTKIRQHGVTRKQVGL 300 Query: 207 ITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 + L S + P+ +D IG + + ALA+ I D+ + Sbjct: 301 VIDGAPLAASNTTFWPVESDGKVIGKVTSAIYSPRLEQNIALAMLDIAYADNGTQAFAET 360 Query: 258 TVHGVRVKA 266 +V + V Sbjct: 361 SVGRLPVTV 369 >gi|300702545|ref|YP_003744145.1| glycine cleavage complex protein t, aminomethyltransferase, tetrahydrofolate-dependent [Ralstonia solanacearum CFBP2957] gi|299070206|emb|CBJ41497.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Ralstonia solanacearum CFBP2957] Length = 375 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + + +V Q + R S + Sbjct: 111 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTVTPRRSDNNT 148 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + KTY L P T + + P +A ++G+ Sbjct: 149 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATVDGV------ 194 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 195 --GEIMVARTGYTG 206 >gi|313205666|ref|YP_004044843.1| glycine cleavage system t protein [Riemerella anatipestifer DSM 15868] gi|312444982|gb|ADQ81337.1| glycine cleavage system T protein [Riemerella anatipestifer DSM 15868] Length = 359 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 102/310 (32%), Gaps = 53/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A LQ + + +V L A+ S + +G I+ ++ K+E+ + Sbjct: 49 SHMGQFFIEGAGAKELLQYVTSNNVEALENGKAQYSCLPNGKGGIVDDLIVYKMEDQKYF 108 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS--- 121 + ++ S D + Y K + + ++ + + D + + Sbjct: 109 VVVNASNIDKDWQHISKYNEKFGAKMT-NASDEISLIAIQGPKALDTLQKLTDNQLADIP 167 Query: 122 -----------IADVLL--------------------HRTWGHNEKIASD-------IKT 143 +ADV++ + W K + + Sbjct: 168 YYHFTVGSVDGVADVIISNTGYTGSGGFEIYFKNEYAEQIWDALTKAGEEFGLIPCGLAA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D T P +A + + + ++ ++ +++ + + I RK Sbjct: 228 RDTLRLEKGFCLYGNDI-DDTTSPLEAGLGWITKLDTE---FVDRDFLAQQKEQGITRKL 283 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258 +P P++ ++ IG + K L +A +D+ + + + Sbjct: 284 VGFEMQEKAIPRHDYPVVDSEGNIIGKVTSGTMSPMKKIGLGLAYVDQPHFKLGSEIFIQ 343 Query: 259 VHGVRVKASF 268 + V A Sbjct: 344 IRNKNVPAKV 353 >gi|262403445|ref|ZP_06080003.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. RC586] gi|262349949|gb|EEY99084.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. RC586] Length = 376 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 95/272 (34%), Gaps = 44/272 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L++++ D++ LP R + QG I+ +++ + D Sbjct: 57 SHMGQLRLYGAQAAAALESLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ + + I L + L ++V +E+ ++ + Sbjct: 116 VVVNAACKAQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMD 174 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150 + I R + +K A+ + LR+ Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGTREGGFPGAEIILSQIETKQVSRKRVG 294 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236 ++ T G+ + +IG + Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAG 326 >gi|226307101|ref|YP_002767061.1| aminomethyltransferase [Rhodococcus erythropolis PR4] gi|229490394|ref|ZP_04384235.1| glycine cleavage system T protein [Rhodococcus erythropolis SK121] gi|226186218|dbj|BAH34322.1| aminomethyltransferase [Rhodococcus erythropolis PR4] gi|229322684|gb|EEN88464.1| glycine cleavage system T protein [Rhodococcus erythropolis SK121] Length = 366 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 94/296 (31%), Gaps = 46/296 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + + +D Sbjct: 54 SHLGKAVVRGAGAAEFVNSALTNDLNKIGPGKAQYTLCCNESGGVIDDLIAYYVSDDEIF 113 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVL--SWNQEHTFSNSSF 115 L + + ++ L+ R+ ++ +Q V + + ++ Sbjct: 114 LVPNAANTADVVAALVALAPDGITVEDQHRAYGVLAVQGPKSVAVLTALGLPTEIEYMAY 173 Query: 116 IDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHELR 148 D ++ V + R+ W +E + A+ + LR Sbjct: 174 EDAEWNGVPVRVCRSGYTGEVGYELLPRWEDSEPLFRALLEAVRAEGGQAAGLGARDTLR 233 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + I P +A I K + G+E ++ + RK I Sbjct: 234 TEMGYPLHGHELSLE-ISPLEARCGW--AIGWKKPTFWGKETLTDEKAAGPARKLWGIKA 290 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 + +G +L D IG K +A+A +D + G + V Sbjct: 291 LDRGVLRAGLGVLRDGEAIGETTSGTFSPSLKVGIALALLDS-GANVSAGDEIEVD 345 >gi|119357809|ref|YP_912453.1| glycine cleavage system aminomethyltransferase T [Chlorobium phaeobacteroides DSM 266] gi|166221544|sp|A1BI02|GCST_CHLPD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|119355158|gb|ABL66029.1| glycine cleavage system T protein [Chlorobium phaeobacteroides DSM 266] Length = 365 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 76/226 (33%), Gaps = 46/226 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ + FLQ ++T D+ + A+ + +L P G ++ +I +++ TF Sbjct: 49 SHMGNFYVTGERSEAFLQYMVTNDLSKVRDGEAQYNLMLYPNGGVVDDLIIYRLDSKTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ S + L + V +E +++ + Sbjct: 109 LIVNASNTEKDYAWLQQHIGAFDGVCLEDHTDRLSLIALQGPVAIDIVKTVFPSVDFDAL 168 Query: 120 ---------FSIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146 + A V++ RT EK + + + Sbjct: 169 LQFQFCRTLYGDAPVMIARTGYTGEKGVEICLPNEAALPLWEALYDAGRACGISPVGLGA 228 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 LR+ G + I P +A + + + KG +IG+E Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDINPLEARLKW--AVKMDKGSFIGRE 271 >gi|299065223|emb|CBJ36389.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Ralstonia solanacearum CMR15] Length = 375 Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 40/194 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ ++ L A + +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNIDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + + Q I R S + Sbjct: 111 RLVVNAGTAPT----------------------DLAWIVAQNAAAGTGVTITPRRSDNNA 148 Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + K Y L P T + + P +A ++G+ Sbjct: 149 GAEPLGIVAVQGPNARAKAYAAL--------PGTQAVGEALKPFNAGFATIDGV------ 194 Query: 185 YIGQEVVSRIQHRN 198 G+ +V+R + Sbjct: 195 --GEIMVARTGYTG 206 >gi|269124490|ref|YP_003297860.1| glycine cleavage T protein (aminomethyl transferase) [Thermomonospora curvata DSM 43183] gi|268309448|gb|ACY95822.1| glycine cleavage T protein (aminomethyl transferase) [Thermomonospora curvata DSM 43183] Length = 340 Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 94/296 (31%), Gaps = 57/296 (19%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 +V G AI FL + T ++ L + + + +L G ++ L+ + F++E+ Sbjct: 28 GLFQVQGPGAIRFLNEVTTRNIEFLLEEQSSTALVLDDAGHVISDVLV-HCQGTEFLVEV 86 Query: 70 DRSKRDSLIDKLLFYKLRS------NVIIEIQPINGVVLSWNQEHTFSNS---------- 113 + ++R + L R+ V + V +F + Sbjct: 87 EPARRARTWEHL-----RAVAESLDYVELTDVSPARRVFGVEGPASFRIAQHFLSFPVSS 141 Query: 114 ----SFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF-- 160 F R+ ++LL RT E A + ELR + + Sbjct: 142 LAYRGFTTVRWRDHELLLSRTGVTGEYGYKFHIDAAGAEELRQELRSLGALPVGSAALDI 201 Query: 161 -------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 FP + + + + + G+E ++R R+ Sbjct: 202 CRTEMRFVDLDAEGGRECFPFEVGLQWMVDMHHD---FRGKEALARRIDEGFPRRPVCWT 258 Query: 208 TGTD--DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL 257 + P G+ + + +G + V L AR+D+ A+ + L Sbjct: 259 ADPELAAPPAPGTALSIEGQPVGEVTHAVRSPGLGRVIGTARLDETVAAVDVELTL 314 >gi|26991870|ref|NP_747295.1| glycine cleavage system aminomethyltransferase T [Pseudomonas putida KT2440] gi|31340121|sp|Q88CI7|GCST_PSEPK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|24986990|gb|AAN70759.1|AE016720_2 glycine cleavage system T protein [Pseudomonas putida KT2440] Length = 360 Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E + Sbjct: 50 SHMTVIDVDGTDATVWLQRLLANDVARLDDPGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + R ++D L + +V +++P ++ ++ + A Sbjct: 109 RLVTNAATRAKVLDWLQLQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164 Query: 126 LLHRTWGHNEKIASDIK 142 L R E +A Sbjct: 165 ALIRELRPFEGVADGDW 181 >gi|160936647|ref|ZP_02084014.1| hypothetical protein CLOBOL_01537 [Clostridium bolteae ATCC BAA-613] gi|158440438|gb|EDP18183.1| hypothetical protein CLOBOL_01537 [Clostridium bolteae ATCC BAA-613] Length = 375 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 98/303 (32%), Gaps = 60/303 (19%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ L ++T D + AR S + QG ++ ++ K+ +D + + ++ + +D Sbjct: 74 GPDALKNLNMLLTNDYTVMAEGQARYSPMCNEQGGVVDDLIVYKVRDDCYFIVVNAANKD 133 Query: 76 SLIDKLLFY----KLRSNVIIEIQPIN-------GVVLSWNQEHTFSN---SSFID---- 117 + + + ++ ++ + V+ +E + D Sbjct: 134 KDYAWMKAHQSGDVVFDDISSQVAQLALQGPKAMDVLKKVAKEEDIPEKYYTCLFDRMVG 193 Query: 118 -----------------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 E LL I + LR+ G+ Sbjct: 194 GMKCIISKTGYTGEDGVEIYLAPEDAPKMWELLMEAGKDEGLIPCGLGARDTLRLEAGMP 253 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDL 213 + TI P +A + + + + K +IG++ + Q + + RKR + + Sbjct: 254 LYGHEM-DDTISPKEAGLGIF--VKMDKDDFIGKQAI---QDKGPLTRKRVGLKVTGRGI 307 Query: 214 PPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH--GVRVK 265 P+ + ++G A+A+ I G AL V G RV Sbjct: 308 IREHQPVYIGEQQVGMTTSGTHCPFLGYPAAMALVDI----GFKDPGTALEVDVRGRRVA 363 Query: 266 ASF 268 A Sbjct: 364 AEV 366 >gi|333024293|ref|ZP_08452357.1| putative glycine cleavage system aminomethyltransferase T [Streptomyces sp. Tu6071] gi|332744145|gb|EGJ74586.1| putative glycine cleavage system aminomethyltransferase T [Streptomyces sp. Tu6071] Length = 404 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 57/298 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT Sbjct: 82 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 140 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100 +++ + S +++D L Y L R I ++G+ Sbjct: 141 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 200 Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143 + + + R A + WG + + + Sbjct: 201 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 260 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + + + P DA + + + K G ++G+E + + Sbjct: 261 RDTLRLEAGMPLYGHELSTA-LTPFDAGLGRV--VKFEKTSNEGRFVGREALEAAAEKAA 317 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 RK +I +P +G ++ D +G + K LA+A +D A Sbjct: 318 STPPRKLVGLIAAGRRVPRAGYAVVADGQVVGEVTSGAPSPTLGKPLAMAYVDAAHAA 375 >gi|328885193|emb|CCA58432.1| Aminomethyltransferase (glycine cleavage system T protein) [Streptomyces venezuelae ATCC 10712] Length = 374 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 58/311 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A+ L A++ + T+ AR + I G IL ++ ++ E Sbjct: 52 LSHMGEITVTGPQAVELLDHALVGN-ISTVGVGRARYTMICQEDGGILDDLIVYRLGETE 110 Query: 65 FILEIDRSKRDSLIDKLLFYK------LR----SNVIIEIQ--------------PINGV 100 +++ + S ++D L +R + +I +Q ++G+ Sbjct: 111 YMVVANASNAQIVLDALTGRAAGFDAEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 T + + R + E I + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFLKPEHAEGVWKALTEAGAPVGLIPCGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + ++ P DA + + + K G ++G+E + + R Sbjct: 231 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFEKTTNEGRFVGREALEKAAERAE 287 Query: 200 I---RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKV-DHAI 251 RK ++ +P +G ++ D + IG + L A+A +D Sbjct: 288 TAPPRKLVGLVAEGRRVPRAGFSVVKDGVVIGEVTSGAPSPTLGKPIAMAYVDAAHAEPG 347 Query: 252 KKGMALTVHGV 262 +G+ + + G Sbjct: 348 TQGVGVDIRGT 358 >gi|237708033|ref|ZP_04538514.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 9_1_42FAA] gi|237724816|ref|ZP_04555297.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. D4] gi|229437011|gb|EEO47088.1| glycine cleavage system aminomethyltransferase T [Bacteroides dorei 5_1_36/D4] gi|229457861|gb|EEO63582.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 9_1_42FAA] Length = 361 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 60/307 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99 + ++ KL V + P Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169 Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146 + ++ SN+ + + A + + + Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G D T P +A + + K +I + ++ + + + RK Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 +P G ++ D +IG + K + + + A+ + + V G Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347 Query: 262 VRVKASF 268 ++KA Sbjct: 348 RKLKAVI 354 >gi|168029405|ref|XP_001767216.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681471|gb|EDQ67897.1| predicted protein [Physcomitrella patens subsp. patens] Length = 412 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 86/278 (30%), Gaps = 50/278 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G AI FL+ ++ AD+ L S G ++ +I+K+ Sbjct: 83 SLFDVSHMCGLSLKGPDAIDFLETLVVADIKGLANGTGTLSVFTNENGGVIDDTVITKVT 142 Query: 62 EDTFILEIDRSKRDSLIDKLLFY----------------------------------KLR 87 +D L ++ RD + L Y KL Sbjct: 143 DDHIYLVVNAGCRDKDLAHLEKYLKPFLASGKSVGWHIHDERSLLALQGPLAGEVLQKLT 202 Query: 88 ----SNVIIEIQPINGVVLS--------WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 S + I + S + E F S + + ++ + G Sbjct: 203 KEDLSKMYFSDFKIIDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMDKAPGKLR 262 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRI 194 + LR+ G+ D I P +A + G +G ++G E + R Sbjct: 263 LTG--LGARDSLRLEAGLCLYGNDLE-QHISPIEAGLAWTVGKRRRAEGNFLGAEPILRQ 319 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + R+R I+ + + IG + Sbjct: 320 IKDGVSRRRVGFISTGAPARAHSEILDLEGKNIGEITS 357 >gi|217967897|ref|YP_002353403.1| glycine cleavage system T protein [Dictyoglomus turgidum DSM 6724] gi|217336996|gb|ACK42789.1| glycine cleavage system T protein [Dictyoglomus turgidum DSM 6724] Length = 356 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 44/262 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ F+Q + T DV L A+ S IL G I ++ +I E+ F+ Sbjct: 50 SHMGRILLKGQKVKNFVQYVTTNDVNNLYPGKAQYSLILNYDGTIKDDIIVYEISEEEFL 109 Query: 67 LEIDRSKRDSLIDKL---LFYKL------------------RSNVIIEIQPINGVVLSWN 105 L ++ ++D L +++ V ++ + LS Sbjct: 110 LVVNAINTQKILDWLNLNNKFEVNILDLTNTTTLLAIQGPDSEKV---LEEYFNLNLSNI 166 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE--------------KIASDIKTYHELRINH 151 + + F + I R E + + LRI Sbjct: 167 KYYHFKKNHMIISRTGYTGEDGFEIVSDPEIGRKIFRDLVEKKKATPCGLGARNTLRIEM 226 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITGT 210 G + +T P +A + + + L KG +IG++ +V R + I K +++ Sbjct: 227 GYALYGHEIDENTT-PWEANLGWV--VKLNKGDFIGKDSLVERKTKKEKILKGFVML--E 281 Query: 211 DDLPPSGSPILTDDIEIGTLGV 232 + +P G + D IG + Sbjct: 282 NGIPRDGYEVYLDKERIGYITS 303 >gi|318059464|ref|ZP_07978187.1| glycine cleavage system aminomethyltransferase T [Streptomyces sp. SA3_actG] gi|318077288|ref|ZP_07984620.1| glycine cleavage system aminomethyltransferase T [Streptomyces sp. SA3_actF] Length = 379 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 57/298 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT Sbjct: 57 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 115 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100 +++ + S +++D L Y L R I ++G+ Sbjct: 116 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 175 Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143 + + + R A + WG + + + Sbjct: 176 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 235 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + + + P DA + + + K G ++G+E + + Sbjct: 236 RDTLRLEAGMPLYGHELSTA-LTPFDAGLGRV--VKFEKTSSEGRFVGREALEAAAEKAA 292 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 RK +I +P +G ++ D +G + K LA+A +D A Sbjct: 293 STPPRKLVGLIAAGRRVPRAGYAVVADGQVVGEVTSGAPSPTLGKPLAMAYVDAAHAA 350 >gi|193212088|ref|YP_001998041.1| glycine cleavage system aminomethyltransferase T [Chlorobaculum parvum NCIB 8327] gi|238692611|sp|B3QLF1|GCST_CHLP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|193085565|gb|ACF10841.1| glycine cleavage system T protein [Chlorobaculum parvum NCIB 8327] Length = 365 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF Sbjct: 49 SHMGNFYVRGERALEFLQYVTTNDLGKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTF--------------- 110 L ++ S + L + V +E + +++ F Sbjct: 109 LIVNASNCEKDFAWLSDHVGGFEGVTLENRTSELSLIALQGPKAFEVLGRVFPEAGLDKL 168 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK-------IASDIKTY------------------- 144 ++ F F A+ ++ RT E + Sbjct: 169 ASFHFATVPFGGAEAMVARTGYTGEAGVEICLPNEEAEALWTALMAAGKNDGIQPIGLGA 228 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + T+ P +A + + + + K +IG++ + Q RK Sbjct: 229 RDTLRLEMGYSLYGHEI-DQTVNPLEARLKWV--VKMDKPNFIGKQ--ACQQVELDPRKS 283 Query: 204 PMIITGTD-DLPPSGSPILTDDI-EIGTLGV 232 + + +P + D EIG + Sbjct: 284 VVGFSLDGRAIPRQHFKVYNSDKQEIGEVCS 314 >gi|289664259|ref|ZP_06485840.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 369 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLDPADTAAAS 169 Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 D+ L RT E + + ++ Sbjct: 170 KLGRFSALQTHSRDGIDLFLARTGYTGEDGFEIVLPQDAAVAFWNALLTQGVKPAGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DDAVTPYEAALAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287 Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +L + + EI GT +G KA+A AR+ + + + Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345 Query: 261 GVRVKASF 268 V ++A Sbjct: 346 QVPLRAVK 353 >gi|159469919|ref|XP_001693107.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii] gi|158277365|gb|EDP03133.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii] Length = 409 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 88/297 (29%), Gaps = 52/297 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK AI FL+ ++ D+ L SA +G I+ +I+K+ ++ Sbjct: 87 SLKGKDAIQFLEGLVVGDIAGLKDGTGSLSAFTNEKGGIIDDTVITKVNGQHIYTVVNAG 146 Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 RD + L + + V + + ++ + + Sbjct: 147 CRDKDLAHLSKHLAAAKSKGLDVAMTVHDDRSLLALQGPAAAEVVAGLVAPGVDLKAMYF 206 Query: 119 -RFSIADVLLHRTW------------------GHNEKIASDIKT-----------YHELR 148 F D+ W H +A + LR Sbjct: 207 SDFKPIDLGGIPCWVTRTGYTGEDGFEISVPNSHAVALAEKLTANKRVRMAGLGPRDSLR 266 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207 + G+ D + P +A + G K ++G +++ + + ++R + Sbjct: 267 LEAGLCLYGNDL-NEDLTPVEAGLAWTIGKRRREKFDFLGGDIIKKQLAEGVSKRRVGFV 325 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260 + D +G + L A+ +DK K G AL V Sbjct: 326 STGAPARQHSVVSTPDGKVVGEITSGAFSPCLKKNIAMGYVDK--DFAKAGTALKVE 380 >gi|289667421|ref|ZP_06488496.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 369 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLDPADTAAAS 169 Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 D+ L RT E + + ++ Sbjct: 170 KLGRFSARQTHSRDGIDLFLARTGYTGEDGFEIVLPQDAAVAFWNALLTQGVKPAGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DDAVTPYEAALAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287 Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +L + + EI GT +G KA+A AR+ + + + Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLQVDIRGK 345 Query: 261 GVRVKASF 268 V ++A Sbjct: 346 QVPLRAVK 353 >gi|144898463|emb|CAM75327.1| Glycine cleavage T protein (aminomethyl transferase) [Magnetospirillum gryphiswaldense MSR-1] Length = 370 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 83/263 (31%), Gaps = 38/263 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G + L++++ D+ L R S QG IL +ISK+ ED Sbjct: 56 SHMGQITIEGDNVATLLESLVPGDIQGLGLGRTRYSVFTNDQGGILDDLMISKLAEDKLF 115 Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + +D+ L +L ++ +Q + F+ Sbjct: 116 LVVNAACKDADFAHLSRALSGKAKLSQLDDRALLALQGPQAATVMARLAPGAETQGFMSI 175 Query: 119 R-FSIADV--------------------------LLHRTWGHNEKIASDIKTYHELRINH 151 R + IAD+ L E + LR+ Sbjct: 176 REYPIADIPCLVTRSGYTGEDGYEISVANVDAEKLARTLLAQPEVKPIGLGARDSLRLEA 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ +D T P + + + G +G + G ++ + R R I Sbjct: 236 GLCLYGSDIDT-TTTPVEGRIAWIIGKRRREQGGFPGAAIIQKQLTEGAPRLRVGIKPVG 294 Query: 211 DDLPPSGSPILT-DDIEIGTLGV 232 + + I D +G + Sbjct: 295 RAPARAHTEITDVDGTPLGEITS 317 >gi|285018969|ref|YP_003376680.1| glycine cleavage systemT protein, aminomethyltransferase [Xanthomonas albilineans GPE PC73] gi|283474187|emb|CBA16688.1| putative glycine cleavage system t protein, aminomethyltransferase [Xanthomonas albilineans] Length = 368 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ V L A + +L PQG ++ ++ + + F Sbjct: 50 SHMTVVDLHGEQVRAFLRHLLANSVDKLKVPGKALYTCMLNPQGGVIDDLIVYYMSDAFF 109 Query: 66 ILEIDR-----------SKRDSL------IDKLLFYKL-----RSNVI------------ 91 L ++ ++ + D + R+ VI Sbjct: 110 RLVVNAATRVNDLAWIGAQAQAFGVQVRERDDFAMVAVQGPNARAKVIGLLREGDRAAAE 169 Query: 92 -------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 +E+ GV L + F + + Sbjct: 170 KLTRFAAVEVVSREGVPLFVARTGYTGEDGFEIVLPQQQAPAFWAALLSAGVAPAGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + ++G+EV+ + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DERVSPYEAGLAWTVALDEGRA-FVGREVLEAQKAGGAPRQMI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT E GT +G KA+A AR+ + + Sbjct: 288 GVVMDEKGVLRHGQKVLTAQGEGEILSGTFSPTLG-KAIAFARV-PAGEPGAVRVDIRGK 345 Query: 261 GVRVKASF 268 GV V+ Sbjct: 346 GVPVRVVK 353 >gi|94500326|ref|ZP_01306859.1| glycine cleavage system aminomethyltransferase T [Oceanobacter sp. RED65] gi|94427625|gb|EAT12602.1| glycine cleavage system aminomethyltransferase T [Oceanobacter sp. RED65] Length = 365 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEE-DT 64 S+ + + + G A +LQ ++ DV L A + +L QG ++ ++ K E Sbjct: 50 SHMTVVDITGSDATAYLQYLLANDVAKLKTEGKALYTGMLNEQGGVIDDLIVYKAEHLGG 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 + L ++ + R+ + + + + NV + QP ++ Sbjct: 110 YRLVVNCATREKDLAWMEKHSHKFNVALSEQPELAMIAVQGPNAI 154 >gi|313125609|ref|YP_004035873.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] gi|312291974|gb|ADQ66434.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551] Length = 368 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 55/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63 S+ I+V G A +Q + T DV L ++ + I +G IL ++ ++ + D Sbjct: 51 SHMGEIEVSGPDATRLMQRLTTNDVTLLDPGDSQYAMITDAEGTILDDTVVYRLPDEETD 110 Query: 64 TFILEIDRSKRDSLIDKLL--------------------FYKLR---------------- 87 ++ + + + D+ + ++ Sbjct: 111 RYLFIPNAGHDEEMHDRWTSHRDEWELDARIANTTEEWAMFAVQGPDAKDAVVAAADGDV 170 Query: 88 ---SNVIIEIQPINGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKT 143 S + + GV + F I A+ + + +E + Sbjct: 171 GSLSKFEATYEDVVGVRSWVARTGYTGEDGFEILCPVEEAETVWNAFVEDHESQPCGLGA 230 Query: 144 YHELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G + DF P + P++A + + ++G++ + I + Sbjct: 231 RDTLRMEMGFLLSGEDFDPESEPRNPYEAGVGFTVKLDTE---FVGRDALEGIDEEGVEE 287 Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254 K + +P G I+ D+ +G + AL ++ D Sbjct: 288 KFVGLKLLDRGVPRHGYDIVDADNHVVGHVTSGTMSPTLGEPIALGYVPVEHADPGTTLS 347 Query: 255 MALTVHGVRVKA 266 + + R K Sbjct: 348 VVVRGQEKRAKV 359 >gi|300864394|ref|ZP_07109266.1| glycine cleavage system aminomethyltransferase T [Oscillatoria sp. PCC 6506] gi|300337620|emb|CBN54412.1| glycine cleavage system aminomethyltransferase T [Oscillatoria sp. PCC 6506] Length = 390 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 100/286 (34%), Gaps = 49/286 (17%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILEIDRSKRD 75 LQ ++ +D+ L A+ + +L +G IL + + D ++ ++ Sbjct: 89 LQTLVPSDLGRLQPGQAQYTVLLNAKGCILDDIIFYYQDPDPTTGEQRGVMIVNAATRAR 148 Query: 76 S---LIDKLLFYKL------RSNVIIEIQP--------------INGVVLSWNQEHTFSN 112 + L + + V+I +Q + V + E T Sbjct: 149 DKAWIGAHLELSGISFIDISKEKVLIAVQGPQATAHLQQFVKENLAAVKFFGHLEATVLG 208 Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 R +IA L R + + LR+ + + D Sbjct: 209 EPAFIARTGYTGEDGFEVMLDAIAGKELWRNLLAAGVVPCGLGARDTLRLEAAMCLYSQD 268 Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 T P +A + + + +KG +IG++V+ + + + ++ + + G P Sbjct: 269 I-DDTTTPLEAGLGWVVHLD-SKGYFIGRKVLEQQKATGVAKRLVGLEMEGRHIARHGYP 326 Query: 220 ILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 +L++ + +G + KA+A+A + AI + + + + G Sbjct: 327 VLSEGVVVGEITSGTLSPTLNKAIALAYVPTPLAAIGQQLEVEIRG 372 >gi|149913935|ref|ZP_01902467.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. AzwK-3b] gi|149812219|gb|EDM72050.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. AzwK-3b] Length = 1003 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 95/324 (29%), Gaps = 67/324 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + L R + G ++ +++++++DTF+ Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTNMMSNLKPGRCRYGLMCNENGFLMDDGVVARLDDDTFL 729 Query: 67 LEIDRSKRDSLIDKL-----------LFY-------------------KLRSNVIIEIQP 96 DS+ + Y K+ + + Sbjct: 730 CHTTTGGADSIHAHMEEWLQTEWWDWKVYTANVTEQYAQIAVVGPKARKVLEKLTDDDIS 789 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI----- 141 + + ++ T R S + L W + Sbjct: 790 ADALSFMGWKDITLHGIKARAYRISFSGELSYEVAVPASQGRALWDALLAEGKEFGVTPY 849 Query: 142 --KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + H +R G + + T+ P D +D IS K Y+G+ R + Sbjct: 850 GTEALHIMRAEKGFIMIGDE-TDGTVIPQDLGLDW--AISKKKEDYLGKRAQERSHMTDP 906 Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247 R + + + T P G+ D V G + +A+ + + Sbjct: 907 TRWKLVGLQTLDGSTLPDGAYATADGTNANGQRNVQGRVTSSYHSPTLGRGIAMGVV--L 964 Query: 248 DHAIKKGMAL---TVHGVRVKASF 268 + + G L V G +KA Sbjct: 965 NGPARMGDVLDFPKVDGTVIKAKI 988 >gi|60280045|gb|AAX16385.1| aminomethyltransferase [uncultured murine large bowel bacterium BAC 31B] Length = 362 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 97/305 (31%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + +V L + + G I+ L+ E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D++ ++ I+ +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSINLSDLPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K + LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKVWDAVFEAGAEFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + ++ + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + TD IG + + R + + + + ++ Sbjct: 294 IPRHGYELYGTDGAAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|310822290|ref|YP_003954648.1| aminomethyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309395362|gb|ADO72821.1| Aminomethyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 363 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 105/315 (33%), Gaps = 51/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+ G A+ +I+ D++ A + +LT QG + + + + Sbjct: 50 SHMGEIEFTGPGALETANRLISNDLVRCKDGQAVYAGLLTEQGTFVDDVVAYRFSPERIF 109 Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++ S R+ + + RS+ I +Q L T + + +D Sbjct: 110 ICVNSSNREKDFAWMREHAQGVKPVDRSSDFAQIAVQGPKAEALVQRLTKTDVSKAQVDT 169 Query: 119 -RFSIADV-----LLHRTWGHNEK-----IASD--IKTYHELRINHGIVDPN-------- 157 RF+ +V ++ RT E ASD ++ L + G D Sbjct: 170 YRFTEGEVAGVKCIISRTGYTGEDGFELYCASDRAEALWNAL-LQEGQADGVMACGLGAR 228 Query: 158 ----TDF--------LPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 T+ + +A + + + L K G +IG++ + + + + RK Sbjct: 229 DSLRTEMKYALYGNDIDEAHTALEAGLGWI--VKLDKPGGFIGKQALEKQKAEGVQRKLV 286 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258 + +P G PIL D +G + V + + + Sbjct: 287 GFVLTGSGIPRHGYPILKDGQRVGEVTSGTMGPSVKKPIGMGYVPAALASEGATFDVEIR 346 Query: 259 VHGVRVKASFPHWYK 273 V + ++K Sbjct: 347 GRAVAAQVVKTPFWK 361 >gi|315022602|gb|EFT35628.1| glycine cleavage system aminomethyltransferase T [Riemerella anatipestifer RA-YM] gi|325336892|gb|ADZ13166.1| Glycine cleavage system T protein (aminomethyltransferase) [Riemerella anatipestifer RA-GD] Length = 359 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 53/288 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A LQ + + +V L A+ S + +G I+ ++ K+E+ + Sbjct: 49 SHMGQFFIEGAGAKELLQYVTSNNVEALENGKAQYSCLPNGKGGIVDDLIVYKMEDQKYF 108 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS--- 121 + ++ S D + Y K + + ++ + + D + + Sbjct: 109 VVVNASNIDKDWQHISKYNEKFGAKMT-NASDEISLIAIQGPKALDTLQKLTDNQLADIP 167 Query: 122 -----------IADVLL--------------------HRTWGHNEKIASD-------IKT 143 +ADV++ + W K + + Sbjct: 168 YYHFTVGSVDGVADVIISNTGYTGSGGFEIYFKNEYAEQIWDALTKAGEEFGLIPCGLAA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D T P +A + + + ++ ++ +++ + + I RK Sbjct: 228 RDTLRLEKGFCLYGNDI-DDTTSPLEAGLGWITKLDTE---FVDRDFLAQQKEQGITRKL 283 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDK 246 +P P++ ++ IG + K L +A +D+ Sbjct: 284 VGFEMQEKAIPRHDYPVVDSEGNIIGKVTSGTMSPMKKIGLGLAYVDQ 331 >gi|284172805|ref|YP_003406187.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena turkmenica DSM 5511] gi|284017565|gb|ADB63514.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena turkmenica DSM 5511] Length = 857 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 50/267 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 ++V G A F+Q + T D+ L R + + +G + +++++++ ++L Sbjct: 550 MEVVGSDAGDFVQRLCTNDMD-LDIGDVRYTLMCNEEGGVRADITVTRVDDNRYLLLTTG 608 Query: 68 ----------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105 ++ S + K+ S V + Sbjct: 609 REVGNNHVAWVREQSPEDVVVNDVTSSLAAMVCTGPNARKVLSEVTDVDLSDEAFPFFTS 668 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYH----------ELR 148 Q+ N R S A L + + E + + Y LR Sbjct: 669 QQFFIKNVPVTALRVSYAGELGWELYTPSEYGEQLWEHLMEAGEEYDIRPYGNGALNALR 728 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G D P++ + + L +IG+E V N I + +T Sbjct: 729 IEKGFRLWGEDLHTEH-NPYETDLGW--AVDLETD-FIGKEAVVEAAEGNNIDHKVACLT 784 Query: 209 GTDDLPP--SGSPILTDDIEIGTLGVV 233 D+ PI D IG + Sbjct: 785 LDDEEATILPHRPIFDGDEPIGYVHSA 811 >gi|85711153|ref|ZP_01042213.1| aminomethyltransferase [Idiomarina baltica OS145] gi|85695066|gb|EAQ33004.1| aminomethyltransferase [Idiomarina baltica OS145] Length = 359 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 99/279 (35%), Gaps = 44/279 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A FL+ ++ DV L A+ +++L QG ++ ++ + ++ Sbjct: 50 SHMTIVDVAGQQAQAFLRYLLVNDVAKLKTEGKAQYTSMLNEQGGVIDDLIVYHFSDTSY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIAD 124 L ++ + R+ + + +V I + ++ E ++ + E F+ + Sbjct: 110 RLVVNSATRERDLGWIEKVAADFDVTINERDDMAMIAVQGPESEAKLNAVLSSEDFATIE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + + + LR+ Sbjct: 170 GMKPFLGKQVGDLFIATTGYTGEKGYEIIVPAEQVNDLWKQLIAADVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P ++ M T +IG++ + + + K ++ Sbjct: 230 EAGMNLYGQDM-DESVTPLESNMGWSVAFEPTDRDFIGRQALEQQKQAGH-HKLVGLVME 287 Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244 + G ++ D E GT +G ++A+AR+ Sbjct: 288 DKGVLRHGLKVIVDGGEGVITSGTFSPSLG-FSIAMARV 325 >gi|46115144|ref|XP_383590.1| hypothetical protein FG03414.1 [Gibberella zeae PH-1] Length = 833 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 80/272 (29%), Gaps = 54/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A LQ + T +V + +L G I ++++ ED F L ++ Sbjct: 505 LEIAGPGAAELLQRLTTGNVAG-EVGKVTFTLLLDNHGGIRSDIFVARLGEDLFHLGVNG 563 Query: 72 SK------------------------------------------------RDSLIDKLLF 83 +D+ D+ Sbjct: 564 PVDLHYFTREAKVQTKASPHRAVHVRDITGGLASVGVWGPLAKDLMKLVSKDNFTDRAFP 623 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 Y + + P S+ E F + D + D L + IA+ Sbjct: 624 YLTTKKIEVSGIPAIATHFSYIGEEGFEIYTTADNGLRLWDAL-WQGGLPYGVIAAGRSA 682 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRK 202 ++ LRI G +D P++A ++ + K Y+G + R + R Sbjct: 683 FNALRIEKGFRSWGSDMT-QEYDPYEAGLEF--ALHPGKDGYVGYNALKGRSSEKVSRRI 739 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + + P+ +G + Sbjct: 740 RGLTVDDGKSVVLGKEPVFVKGRAVGYVTSAA 771 >gi|115379404|ref|ZP_01466507.1| glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1] gi|115363591|gb|EAU62723.1| glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1] Length = 363 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 51/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+ G A+ +I+ D++ A + +LT QG + + + + Sbjct: 50 SHMGEIEFTGPGALETANRLISNDLVRCKDGQAVYAGLLTEQGTFVDDVVAYRFSPERIF 109 Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++ S R+ + + RS+ I +Q L T + + +D Sbjct: 110 ICVNSSNREKDFAWMREHAQGVKPVDRSSDFAQIAVQGPKAEALVQRLTKTDVSKAQVDT 169 Query: 119 -RFSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPN-------- 157 RF+ +V + + ++ L + G D Sbjct: 170 YRFTEGEVAGVKCIISRTGYTGEDGFELYCAXDRAEALWNAL-LQEGQADGVMACGLGAR 228 Query: 158 ----TDF--------LPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 T+ + +A + + + L K G +IG++ + + + + RK Sbjct: 229 DSLRTEMKYALYGNDIDEAHTALEAGLGWI--VKLDKPGGFIGKQALEKQKAEGVQRKLV 286 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258 + +P G PIL D +G + V + + + Sbjct: 287 GFVLTGSGIPRHGYPILKDGQRVGEVTSGTMGPSVKKPIGMGYVPAALASEGATFDVEIR 346 Query: 259 VHGVRVKASFPHWYK 273 V + ++K Sbjct: 347 GRAVAAQVVKTPFWK 361 >gi|227356373|ref|ZP_03840761.1| aminomethyltransferase [Proteus mirabilis ATCC 29906] gi|227163483|gb|EEI48404.1| aminomethyltransferase [Proteus mirabilis ATCC 29906] Length = 364 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ +E + Sbjct: 50 SHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + R+ + + + V I+++ ++ + E Sbjct: 110 RLVVNSATREKDLAWITEHAKDYVVDIQVRDDLALIAVQGPHAQEKVQRLLSESHRQIVA 169 Query: 121 ---------------SIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + + LR+ Sbjct: 170 AMKPFYGVQLDDLFVATTGYTGEAGYEIAMPKEQAVDYWQKLLAVGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + TI P +A M +IG+E + +++ + +++ Sbjct: 230 EAGMDLYGQEM-DETINPLEANMGWTIAWLPEDRQFIGREALEKLRATGTDKLVGLVMRE 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 L + TDD +G L V +A+AR+ + L Sbjct: 289 KGVLRAGSAVHFTDD--LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLLRNR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EIPVEVVKP 354 >gi|197285872|ref|YP_002151744.1| glycine cleavage system aminomethyltransferase T [Proteus mirabilis HI4320] gi|238693209|sp|B4F0N9|GCST_PROMH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|194683359|emb|CAR44066.1| aminomethyltransferase (glycine cleavage system T protein) [Proteus mirabilis HI4320] Length = 364 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ +E + Sbjct: 50 SHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + R+ + + + V I+++ ++ + E Sbjct: 110 RLVVNSATREKDLAWITEHAKDYVVDIQVRDDLALIAVQGPHAQEKVQRLLSESHRQIVA 169 Query: 121 ---------------SIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + + LR+ Sbjct: 170 AMKPFYGVQLDDLFVATTGYTGEAGYEIAMPKEQAVDYWKKLLAVGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + TI P +A M +IG+E + +++ + +++ Sbjct: 230 EAGMDLYGQEM-DETINPLEANMGWTIAWLPEDRQFIGREALEKLRATGTDKLVGLVMRE 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 L + TDD +G L V +A+AR+ + L Sbjct: 289 KGVLRAGSAVHFTDD--LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLLRNR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EIPVEVVKP 354 >gi|225011960|ref|ZP_03702398.1| glycine cleavage system T protein [Flavobacteria bacterium MS024-2A] gi|225004463|gb|EEG42435.1| glycine cleavage system T protein [Flavobacteria bacterium MS024-2A] Length = 361 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 53/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A LQ I + D+ + A+ + +G I+ ++ +++E ++ Sbjct: 49 SHMGEFLVSGAKAFDLLQYICSNDISKINIGKAQYNYFPNEKGGIVDDLIVYRLKETEYL 108 Query: 67 LEIDRSKRDS----LIDKLL--------------------------FYKLRSNVIIEIQP 96 L ++ S D + KL S + E+ Sbjct: 109 LVVNASNIDKDWNWVEKHNSNFGALLENKSEETALLAIQGPKAIEAMQKLTSIPLAELPY 168 Query: 97 INGVVLSWNQ-EHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASDIKTY 144 ++ E+T ++ F + + + E + + Sbjct: 169 YAHTTATFAGCENTLIATTGYTGAGGIEIYFPTNKAPEIWASIMKAGADYEITPAGLAAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G + +T P A + + G + E+++ + + K Sbjct: 229 DTLRIEMGYCLYGNEINDNTS-PLAAGLGWV--TKFETGTF-NSEILALQKKEGLSEKLV 284 Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMAL 257 + T +P SG I+ + IGT+ L +++ + + + Sbjct: 285 GFLLETRGIPRSGYEIVNREGKIIGTVTSGTQSPILSQGIGLGYVKLEYSKPGSEIAIRI 344 Query: 258 TVHGVRVKASF 268 Sbjct: 345 RDKDCPAIIIK 355 >gi|304384132|ref|ZP_07366585.1| glycine cleavage system T protein [Prevotella marshii DSM 16973] gi|304334759|gb|EFM01036.1| glycine cleavage system T protein [Prevotella marshii DSM 16973] Length = 363 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 102/295 (34%), Gaps = 45/295 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + GK A ++ I T DV +L P G + L+ K+ E F Sbjct: 51 SHMGEVFITGKDAQKYVNHIFTNDVTPDEPNKVYYGMMLYPDGGTVDDLLVYKMSETKFF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH-------------TFSN 112 L I+ + D +D + +++I+ G + E Sbjct: 111 LVINAANIDKDVDWMKQNATGFDIVIDHCSDRYGQLAIQGPEAEAVVEEVLGLPCKDLVF 170 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHE-----------------LR 148 +F + + +++L RT E I+ + + LR Sbjct: 171 YTFKEMNIAGEEIILSRTGYTGEDGFEIYCSHKLTIEYWDKLMASKRCLPCGLGCRDTLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + + I P + + + L K +IG + + + + + ++ I Sbjct: 231 FEVGLPLYGDEL-SAEISPVMSGLSMFC--KLEKEEFIGMDAIRKQKEEGVKQRVIGIEL 287 Query: 209 GTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTV 259 + +P G I+ D IG + + K++ +A +DK + + + + Sbjct: 288 KDNAIPRHGYEIIKDGKVIGEVTTGYHTISTDKSVCMALVDKEHSKLGTEVEVKI 342 >gi|330448086|ref|ZP_08311734.1| glycine cleavage system T protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492277|dbj|GAA06231.1| glycine cleavage system T protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 372 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 91/268 (33%), Gaps = 44/268 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL++++ D++ LP R + +G I +++ D Sbjct: 54 SHMGQLRLKGDKAAAFLESLVPVDIIDLPVGKQRYALFTNDKGGIEDDLMVTNFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + ++ I L + ++ +Q + ++ F+D Sbjct: 113 LVVNAACKEQDIAHLKANLADGVELEVIEDRALLALQGPKAAAVLAELNPAVADMVFMDA 172 Query: 119 RF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 A+ + N+ + LR+ Sbjct: 173 AHIELMGVECYISRSGYTGEDGYEISVPSDKAEAFARQLLAFNDVEWIGLGARDSLRLEC 232 Query: 152 GIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVS-RIQHRNIIRKRPM 205 G+ D P T P +A + +G + G E++ +I ++ +RKR Sbjct: 233 GLCLYGHDLDP-TTTPFEASLLWAITPVRRAGGDREGGFPGAEIILDQITNKQALRKRIG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ + G+ + DD EIG + Sbjct: 292 LVGQSKAPVREGTKLFDADDNEIGIVTS 319 >gi|224538612|ref|ZP_03679151.1| hypothetical protein BACCELL_03506 [Bacteroides cellulosilyticus DSM 14838] gi|224519746|gb|EEF88851.1| hypothetical protein BACCELL_03506 [Bacteroides cellulosilyticus DSM 14838] Length = 361 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 102/305 (33%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKVQYTCFPNEEGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D + ++ I+ +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K ++ LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGEEFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K +I + ++ + + +RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FINRPMLEKQKTEGTVRKLVGFEMVDRG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + T+ IG + + + + + + + ++ Sbjct: 294 IPRHGYELFNTEGEAIGVVTSGTMSPTRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVRPP 358 >gi|319901533|ref|YP_004161261.1| aminomethyltransferase [Bacteroides helcogenes P 36-108] gi|319416564|gb|ADV43675.1| aminomethyltransferase [Bacteroides helcogenes P 36-108] Length = 363 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S Sbjct: 56 VKGPHALNFLQKVTSNNVAVLTPGKVQYTCFPNEKGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D++ ++ I+ +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K + LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + ++ + + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVDGKN-FTNRVMLEKQKTEGVSRKLVGFEMIDRG 293 Query: 213 LPPSGSPI-LTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + + +G + + + + + + ++V+ Sbjct: 294 IPRHGYELCNAEGEPVGMVTSGTMSPTRKIGIGMGYVKPAYSKAGTEIYIDMRGRKLKVQ 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|86157671|ref|YP_464456.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter dehalogenans 2CP-C] gi|85774182|gb|ABC81019.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 360 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 46/303 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ L + T D+ + A+ + G I+ ++ + + + Sbjct: 50 SHMGEVVFRGPRALAALGRVFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRGAEDLL 109 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119 + ++ R + L + ++V E + L T + S+ R Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169 Query: 120 FSIADVLLHR-TWGHNEKIASD-----------IKTYHELRINHGIVDPNTDFL------ 161 F +V R D + + L + G + Sbjct: 170 FGEGEVAGVRCMVARTGYTGEDGFELFCRADLGPRLWDAL-MEAGAPEGIAPCGLGARDS 228 Query: 162 --------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 T P +A + + + L KG +IG++ + + + + + RK Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGEFIGRDALLKQKEQGLSRKLVGFQ 286 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G P+L D ++G + A+ +A + A A+ + G Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGEVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346 Query: 264 VKA 266 A Sbjct: 347 AAA 349 >gi|55980492|ref|YP_143789.1| glycine cleavage system aminomethyltransferase T [Thermus thermophilus HB8] gi|61213274|sp|Q5SKX0|GCST_THET8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|55771905|dbj|BAD70346.1| glycine cleavage system T protein (probable aminomethyltransferase) [Thermus thermophilus HB8] Length = 349 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 52/303 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ FLQ D L A+ S + +G ++ + ++ E+ ++ Sbjct: 49 SHMGEFLVRGKEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------N 112 + ++ + + L V +E +L+ S Sbjct: 109 MVVNAANIAKDLAHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRK 168 Query: 113 SSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149 + R + L RT + + LR+ Sbjct: 169 NDVFPARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALVEAGAKPAGLGARDSLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + P + + ++G+E + R+R + + Sbjct: 229 EAGFPLYGHELT-EETNPLCTPWAW---VVKKEKAFLGKEAML----AQACRERLVGLVL 280 Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G +L+ +G + + ++ +A+A V+ + + V G V Sbjct: 281 EGGIPREGYRVLSGGRPVGRVTSGGYSPLLQRGIALA---YVEEGAEGPFQVEVRGRAVP 337 Query: 266 ASF 268 A+ Sbjct: 338 AAL 340 >gi|294667450|ref|ZP_06732667.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602783|gb|EFF46217.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 369 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 63/173 (36%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMAEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + R +V +E + + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDSAMIAVQGPSARTKVIDLLDPADTAAAS 169 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R + I+ + G + + P A + N + Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQQAAVAFWNAL 216 >gi|325925770|ref|ZP_08187143.1| aminomethyltransferase [Xanthomonas perforans 91-118] gi|325543827|gb|EGD15237.1| aminomethyltransferase [Xanthomonas perforans 91-118] Length = 369 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169 Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 D+ L RT E + + ++ Sbjct: 170 KLGRFAALQTRSRDGIDLFLARTGYTGEDGFEIVLPQEAAVAFWNALLAQGVKPAGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + R+ Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLEYQKAQGAPRQLI 287 Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +L + + EI GT +G KA+A AR+ + + + Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345 Query: 261 GVRVKASF 268 V ++A Sbjct: 346 QVPLRAVK 353 >gi|227872936|ref|ZP_03991238.1| aminomethyltransferase [Oribacterium sinus F0268] gi|227841222|gb|EEJ51550.1| aminomethyltransferase [Oribacterium sinus F0268] Length = 380 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 54/300 (18%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 GK A+ LQ I+T + + AR S + G ++ ++ K ++ + + ++ + R+ Sbjct: 78 GKDALANLQKILTNNFENMVDGQARYSLMCNENGGVVDDLIVYKKGDNDYFIVVNAANRE 137 Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------------------- 108 + ++ +K +V + ++ Sbjct: 138 KDFNWMVQHK-FGDVEFTNVSDDYAQIALQGPKAMDIIRRLTSEENIPQKYYHAVFNATV 196 Query: 109 ------------TFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYHELRINHGI 153 T + + S A+ + + ++ I + LR+ + Sbjct: 197 DGIPCIVSKTGYTGEDGVELYLDSSKAEEMWDKLLAAGKEEGLIPCGLGARDTLRMEAAM 256 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIITGTDD 212 + I P + + + + K +IG+ + I+ + + KR + Sbjct: 257 PLYGHEM-DDEITPLETGLKF--AVKMDKPDFIGK---AAIEAKGEPKIKRVGLKVTGRG 310 Query: 213 LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + +L D IG + +A ID + + + V G +V Sbjct: 311 VIREHQDVLAGDQVIGHTTSGTHCPFLNYPVGMALIDPKYAEVGTQLQVDVRGRKVDVEV 370 >gi|297191932|ref|ZP_06909330.1| glycine cleavage system aminomethyltransferase T [Streptomyces pristinaespiralis ATCC 25486] gi|197721088|gb|EDY64996.1| glycine cleavage system aminomethyltransferase T [Streptomyces pristinaespiralis ATCC 25486] Length = 371 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 99/295 (33%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A+ L A++ + T+ AR + I G IL ++ ++ ED Sbjct: 52 LSHMGEITVTGPQAVDLLNYALVGN-IGTVGLGRARYTMICREDGGILDDLIVYRLGEDE 110 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 +++ + ++D + + + + + ++ E S D Sbjct: 111 YMVVANAGNAQIVLDAVTARAQGFDATVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170 Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 + L+ RT E + K + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVEPQHAEKLWQALTEAGAPAGLIPCGLSC 230 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + + + P DA + + + K G ++G+E ++ R Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKDGDFVGREALTAAAERAESAP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 RK +I +P +G ++ D IG + L A+A +D A Sbjct: 288 PRKLVGLIAEGRRVPRAGMSVVADGTVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 342 >gi|189345960|ref|YP_001942489.1| glycine cleavage system aminomethyltransferase T [Chlorobium limicola DSM 245] gi|238692186|sp|B3EFX7|GCST_CHLL2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189340107|gb|ACD89510.1| glycine cleavage system T protein [Chlorobium limicola DSM 245] Length = 362 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 46/226 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A FLQ + T D+ + A+ + +L G ++ +I +I+ +T+ Sbjct: 49 SHMGNFYVRGVRAGEFLQYLTTNDLSKVSDGEAQYNLMLYTDGGVVDDLIIYRIDAETYF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE--HTFSNSSFIDE----- 118 L ++ S + + V +E + +++ F DE Sbjct: 109 LIVNASNAQKDYAWIQKHIGAFEGVSLEDRTDELSLVALQGPMSGAILRKVFPDEDCNTL 168 Query: 119 ---RFSI-----ADVLLHRTWGHNEK-------IASDIKTY------------------- 144 RF ++L+ RT E+ + ++ + Sbjct: 169 ASFRFRKVYYNGTELLIARTGYTGEQGVEICLPNEAALELWSVLMKAGEEYGIQPIGLGA 228 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 LR+ G + ST+ P +A + + + + KG +IG+E Sbjct: 229 RDTLRLEMGYSLYGHEI-DSTVNPLEARLKWV--VKMEKGPFIGKE 271 >gi|110681233|ref|YP_684240.1| sarcosine dehydrogenase, putative [Roseobacter denitrificans OCh 114] gi|109457349|gb|ABG33554.1| sarcosine dehydrogenase, putative [Roseobacter denitrificans OCh 114] Length = 796 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 49/285 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A FLQ + ++ P A +A+L +G +I +D + L + Sbjct: 491 IEVTGPDACAFLQHLAMRNMDR-PTGTAIYTALLNERGTFESDITAQRIADDHYRLFVGT 549 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDE------------ 118 + + L ++ +V ++ + VL + ++ Sbjct: 550 NAIKRDLAWALRHRDGFDVTLKDSTEDYAVLCLMGPDAARIIAATGAPELCQLGYFQVGP 609 Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHEL----------------RINHGIV 154 R + + W K + + Y L RI G Sbjct: 610 AFIAGKHVRAARMSYVGEAGWEITCKAENALPIYTALKSSGAVPAGLYAQTSMRIEKGFA 669 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITGTDD- 212 + S + P +A + + ++ G +IG Q + R+Q ++ + I D+ Sbjct: 670 AMGHEL-DSDLSPVEAGL---HHMAKKTGGFIGAQALADRVQ---TSKRSLVTIVFDDET 722 Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKGM 255 +P P+ IG + L A + V+ A+ G Sbjct: 723 AVPLGHEPVYAGPDIIGQITSASYGYRLSAPVALAHVNPAVDGGA 767 >gi|317125139|ref|YP_004099251.1| aminomethyltransferase [Intrasporangium calvum DSM 43043] gi|315589227|gb|ADU48524.1| aminomethyltransferase [Intrasporangium calvum DSM 43043] Length = 368 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 49/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + T D+ + A+ + G ++ ++ E+ Sbjct: 57 SHLGKASVQGPGAAEFVNSCFTNDIRRISTGQAQYTLCCDESGGVVDDLIVYLRSEEDVF 116 Query: 67 LEIDRSKRDSLIDKLL--------------FYKL------RSNVIIEIQPI-------NG 99 L + + ++ +L Y + RS+ +++ + + Sbjct: 117 LIPNAANTSEVVRRLKAAAPAGIEVTNLHDAYGVIAVQGTRSDEVLDALGLPTGHDYMSF 176 Query: 100 VVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIKTYHELR 148 V W T + R+ A L E + LR Sbjct: 177 VEADWRGTPVIVCRTGYTGERGYELVPRWDDAPALWDAIVEAMAPFEGKPCGLGARDTLR 236 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G D I P A + K + G++ + + R +++T Sbjct: 237 TEMGYPLHGQDLSLE-ISPVQARAGW--AVGWKKETFWGKDALLAEKANPPRLSRGLLVT 293 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262 G +P S + ++G + ALA+ D V + + V Sbjct: 294 GRG-IPRSHCAVSVHGTQVGEVTSGTFSPTLKQGIALALLHPD-VAEGDTVEIDVRGRAV 351 Query: 263 RVKASFPH 270 + P Sbjct: 352 EARVVKPP 359 >gi|260941956|ref|XP_002615144.1| hypothetical protein CLUG_05159 [Clavispora lusitaniae ATCC 42720] gi|238851567|gb|EEQ41031.1| hypothetical protein CLUG_05159 [Clavispora lusitaniae ATCC 42720] Length = 286 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 104/275 (37%) Query: 9 QSFIKVCGKSAIPFLQAIITA--------------------------------------D 30 +S+I++ G A FL +IT D Sbjct: 10 RSYIRIKGPEASKFLNGLITTRLLPNVVKKKQHTISASENRHLELLNVDLSKNWGLMHED 69 Query: 31 VLTLPYKIAR-----GSAILTPQGKILLYFLISKIE-------EDTFILEIDRSKRDSLI 78 + +I S IL +G+++ + E ++++E+D + ++ Sbjct: 70 IYDPENRIWIRRDGLNSMILNSKGRVVQDCFLYATPFHSPVPPEPSYLVEVDPKYKSQML 129 Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------------------- 106 ++L ++V IE +N Sbjct: 130 SLFKIHRLSADVKIEDASSMSSYYYFNDTPEFEDFLEELQSTYFDTFDTDSALQNANEFI 189 Query: 107 --EHTFSNSS-------FIDERFSIADVLLHRTWGHNEKI-------------ASDIKTY 144 E F +S+ D R + + T + + +D K Sbjct: 190 SREEIFDSSAASNIVGFAFDNRIPNFGLKVVTTQPVDPLLLFSQQFMDKFPVEVTDEKAI 249 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + R +G+ + +++ P + +D +NG+ Sbjct: 250 TQRRFANGLFEYGDAPKGTSLLPFEMNLDYVNGLF 284 >gi|194334616|ref|YP_002016476.1| glycine cleavage system aminomethyltransferase T [Prosthecochloris aestuarii DSM 271] gi|238693305|sp|B4S437|GCST_PROA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|194312434|gb|ACF46829.1| glycine cleavage system T protein [Prosthecochloris aestuarii DSM 271] Length = 363 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 64/266 (24%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ A FLQ + + DV L A+ + +L P+G I+ +I +I+ DT+ Sbjct: 49 SHMGNFMVKGRGAKAFLQHMTSNDVDKLSDGQAQYTLLLYPEGGIVDDLIIYRIDADTWF 108 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPIN---------------GVVLSWNQE 107 + ++ S + L + L + V +E V + + Sbjct: 109 MVVNASNMEKDYSWLQEHLGSF---EGVQLENHTEELSLIALQGPRSMEILDRVFTGGEC 165 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEK-----IASDIKT--Y---------------- 144 F F+ +V++ T E+ + +D T + Sbjct: 166 SGIKPFHFRTVPFNGREVIVAATGYTGERGVEISVPNDAATALWVALMEAGSADGIQPIG 225 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE----------- 189 LR+ G + T P +A + + + KG ++G+E Sbjct: 226 LGARDTLRLEMGYPLYGHEINRETS-PIEARLKWVTRLD--KGNFVGRESCVAVDINPQR 282 Query: 190 -VVSRIQHRNIIRKRPMIITGTDDLP 214 VV + H I ++ + D P Sbjct: 283 TVVGFMMHERAIPRQGFTVYNRDRKP 308 >gi|254485532|ref|ZP_05098737.1| glycine cleavage T protein [Roseobacter sp. GAI101] gi|214042401|gb|EEB83039.1| glycine cleavage T protein [Roseobacter sp. GAI101] Length = 380 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 98/293 (33%), Gaps = 70/293 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A F+Q + D+ + + I G IL ++ ++ E+ F + + D Sbjct: 67 VEITGPDAAKFVQMLTPRDLSKMAVGQCKYILITNADGGILNDPILLRLAENHFWISLAD 126 Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90 +S++D L +Y LR V Sbjct: 127 SDILLWAQGVAVHSGLDVQIGEPDVSPLQLQGPKSGLIMQELFGESIMD-LKYYWLR-EV 184 Query: 91 IIEIQPINGVVLSWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 ++ P+ W+ E S + ER A + GH I Sbjct: 185 DLDGVPLIVSRTGWSSELGYELYLRDGSRGDLLWERIMAAGMEHGLKPGHTSSI------ 238 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 RI G++ + D + P++ D L + + +IG++ + RI+ RK+ Sbjct: 239 ---RRIEGGMLSYHAD-ADNKTNPYELGFDRLVNLDMDAD-FIGKDALRRIKENGPKRKQ 293 Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKV 247 ++ D L + + EIG + V ALA+ +D Sbjct: 294 VGLLIDCDPLKGPNTTFWTVNQGGKEIGKVTSAVYSPRLEKNIALAMVEVDAA 346 >gi|78048752|ref|YP_364927.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757401|sp|Q3BQN6|GCST_XANC5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|78037182|emb|CAJ24927.1| glycine cleavage T protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 369 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPGARTKVIDLLDPADTAAAS 169 Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 D+ L RT E + + ++ Sbjct: 170 KLGRFAALQTRSRDGIDLFLARTGYTGEDGFEIVLPQEAAVAFWNALLAQGVKPAGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + R+ Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLEYQKAQGAPRQLI 287 Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +L + + EI GT +G KA+A AR+ + + + Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345 Query: 261 GVRVKASF 268 V ++A Sbjct: 346 QVPLRAVK 353 >gi|15597638|ref|NP_251132.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1] gi|9948489|gb|AAG05830.1|AE004671_6 glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1] Length = 373 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 92/311 (29%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G L++++ D+L LP R + QG IL +++ + D + Sbjct: 55 SHMGQIRLVGADVALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 L ++ + + + L + L +E +L+ + + + Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172 Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ L R E + LR+ Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D +T P +A + + G + G E + Q + + KR Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + G+ I+ IG + G LA+ + + + Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 350 MVRGKPVTLVV 360 >gi|307298271|ref|ZP_07578075.1| glycine cleavage system T protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916357|gb|EFN46740.1| glycine cleavage system T protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 368 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 98/307 (31%), Gaps = 49/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G AI F ++T V +L S + +G I+ L+ ++ + Sbjct: 52 SHMGEIEIAGPDAIDFSDYLVTNSVSSLKNGAIVYSPMCNEKGGIVDDVLVYRLNNAKTM 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 ++ S +D + K +V I+ + +++ S Sbjct: 112 FVVNASNKDKDFKWITSNKGSFDVKIKDASADFAQIAFQGPRAEEILSEVSQVRLEKIPF 171 Query: 115 ----------------------------FIDERFSIADVLLHRTWGHNEKIAS-DIKTYH 145 ++D ++A G + + + Sbjct: 172 YHFEYGRVNGIKALVSRTGYTGEDGFELYVDPEAAVALWRKILELGSSIGVKPIGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR + + P +A + + + K +IG+EV+ K Sbjct: 232 TLRFEAAYMLYGNELNDYNS-PLEAGLKWT--VKMEKD-FIGKEVLEEQLANGTKYKLKG 287 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHG 261 + + G + + +IG + + K+LA+A ++K I + + + G Sbjct: 288 LELSGKSIARHGFEVFDGEKKIGWITSGIFSPTLQKSLALAYLEKEYWKIGSEVQVEIRG 347 Query: 262 VRVKASF 268 R A+ Sbjct: 348 KRSPATV 354 >gi|116074178|ref|ZP_01471440.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. RS9916] gi|116069483|gb|EAU75235.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. RS9916] Length = 364 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 95/299 (31%), Gaps = 51/299 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G + LQ ++ D+ + A + +L G IL ++ + +DT + Sbjct: 52 SHMGVLRFSGPNPKDALQKLVPTDLHRIGPGQACYTVLLNETGGILDDLIVYDMGDDTVL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID-ER 119 I+ + DS L S + I + +GV+L+ S +S + R Sbjct: 112 AVINAACADSDRAWLEQQLSGSGISISDEKEDGVLLALQGPDAQRVLEGLSGTSLAELPR 171 Query: 120 FSI--------------------------------ADVLLHRTWGHNEKIASDIKTYHEL 147 F A L + + L Sbjct: 172 FGQRMLPLPALGVDVLVARTGYTGEDGFELLLPHDAGRQLWSQLLNAGVTPCGLGARDSL 231 Query: 148 RINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 R+ + D +T P +A + L N + + QEV + RK Sbjct: 232 RLEAAMHLYGNDMDTTTS-PLEAGLGWLVHLENPVDFIGRAALEQEVD-----QGSQRKL 285 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKK-GMALTVH 260 + +P PIL + +GT+ L A + V A+ K G L V Sbjct: 286 VGLRLEGRAIPRHDYPILDGEQTVGTVSSGGWSPCLEAGIGLGYVPKALAKVGTELAVE 344 >gi|240168272|ref|ZP_04746931.1| glycine cleavage system aminomethyltransferase T [Mycobacterium kansasii ATCC 12478] Length = 365 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 93/298 (31%), Gaps = 50/298 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + +++D Sbjct: 53 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 112 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 113 LVPNAANTAAVVGALQDVAPGDLAITNLHRSYAVLAVQGPRSTDVLSALGLPTDMDYMGY 172 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 173 ADSAYSGVPVRVCRTGYTGEHGYELLPPWETAGVVFDALVDAVSDAGGQPAGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + P I P A I K + G++ + + R+ R + Sbjct: 233 TEMGYPLHGHELSPE-ISPLQARCGW--AIGWKKDAFFGRDALLAEKAAG-PRRLLRGLR 288 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + G L P G +L D +G +A+A ID D + G +TV Sbjct: 289 MVGRGVLRP-GLTVLVGDTAVGVTTSGTFSPTLQAGIALALID-TDAEVPDGGQVTVD 344 >gi|294627310|ref|ZP_06705896.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598392|gb|EFF42543.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 369 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMAEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R + I+ + G + + P A + N + Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQQAAVAFWNAL 216 >gi|297579611|ref|ZP_06941538.1| glycine cleavage system T protein [Vibrio cholerae RC385] gi|297535257|gb|EFH74091.1| glycine cleavage system T protein [Vibrio cholerae RC385] Length = 376 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 94/272 (34%), Gaps = 44/272 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D Sbjct: 57 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ + + I L + L ++V +E+ ++ + Sbjct: 116 VVVNAACKAQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMD 174 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150 + I R + +K A+ + LR+ Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 294 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236 ++ T G+ + +IG + Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAG 326 >gi|329959919|ref|ZP_08298450.1| aminomethyltransferase [Bacteroides fluxus YIT 12057] gi|328533216|gb|EGF59981.1| aminomethyltransferase [Bacteroides fluxus YIT 12057] Length = 361 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 97/305 (31%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + +V L + + G I+ L+ E + ++L ++ S Sbjct: 56 VKGPKALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D++ ++ I+ +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSIDLSALPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E +K + LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEVAMKIWDAVFEAGAEFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + ++ + + IRK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVDGKN-FTNRPMLEKQKTEGTIRKLVGFEMVDRG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + D IG++ + + + + + + ++ Sbjct: 294 IPRHGYELYSADGTAIGSVTSGTMSPVRKIGIGMGYVKPEFSKPGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|294634860|ref|ZP_06713382.1| glycine cleavage system T protein [Edwardsiella tarda ATCC 23685] gi|291091733|gb|EFE24294.1| glycine cleavage system T protein [Edwardsiella tarda ATCC 23685] Length = 366 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G + FL+ ++ DV L A SA+L G ++ ++ + E+ F Sbjct: 52 SHMTIVDLHGPNVRAFLRYLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFLAENYF 111 Query: 66 ILEIDRSKRDSLI----DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ER 119 L ++ + R + + L + V + ++ ++ + +D +R Sbjct: 112 RLVVNSATRARDLAWIGEHLPPFG----VELRVRDDLALIAVQGPNARQRVAELLDAEQR 167 Query: 120 FSIAD----------------------------------VLLHRTWGHNEKIASDIKTYH 145 ++AD V R + Sbjct: 168 LALADMKPFFARQIDSLFIATTGYTGEDGYEIALPLAEAVPFWRRLEQAGVRPCGLAARD 227 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR---- 201 LR+ G+ + + P A M +IG++ + R +H+ + Sbjct: 228 TLRLEAGMNLYGQEM-DEQVSPLAANMAWTIAWEPETRDFIGRDALMRQRHQPHAQLVGL 286 Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 K + T L ++ I GT +G +A+AR+ A + + + Sbjct: 287 LMREKGVLRAGMTVSLCTEQGEVVQGVITSGTFSPTLGCS-IALARV-PQGIAGEGRVNI 344 Query: 258 TVHGVRVKASFPH 270 V V P Sbjct: 345 RGREVAVTLVKPS 357 >gi|300783736|ref|YP_003764027.1| aminomethyltransferase [Amycolatopsis mediterranei U32] gi|299793250|gb|ADJ43625.1| aminomethyltransferase [Amycolatopsis mediterranei U32] Length = 363 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 100/302 (33%), Gaps = 53/302 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ + I V GK A L A++ + + AR + I G +L ++ ++ ++ Sbjct: 49 LSHMAEIHVTGKQAADVLDFALVGN-LTGVKPGRARYTMICNESGGVLDDLVVYRLADEH 107 Query: 65 FILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +++ + + D L V+ + ++ + S+ D Sbjct: 108 YLVVANAGNAQVVADALEERVAGFDAVVDDRSETTALIAVQGPKAVEILSAVTDADLDAL 167 Query: 124 -------------DVLLHRTWGHNEK---------------------------IASDIKT 143 DVLL RT E + + + Sbjct: 168 KYYASVPASVKGHDVLLARTGYTGEDGFELFVDADEAPALWRLLLEAGEPHGLVPAGLAC 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202 LR+ G+ + P +A + + + K G ++G+ + +++ R Sbjct: 228 RDTLRLEAGMPLYGNELTVGQS-PFEAGLGRV--VKFEKPGDFVGRAALEERSKQDVPRV 284 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALT 258 R + P G +L D EIG + L A+A +D+ + G L+ Sbjct: 285 RVGLKGAGRRAPRHGYAVLAGDTEIGEVTSGALSPTLGYPIAMAYVDRAYA--EPGTELS 342 Query: 259 VH 260 V Sbjct: 343 VD 344 >gi|127513992|ref|YP_001095189.1| glycine cleavage system aminomethyltransferase T [Shewanella loihica PV-4] gi|166221569|sp|A3QHI2|GCST_SHELP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|126639287|gb|ABO24930.1| glycine cleavage system T protein [Shewanella loihica PV-4] Length = 364 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 101/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVTGAEACDFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLSDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F DE+ + + Sbjct: 110 RIVVNSATREKDLAWITEQVKGYDVTVTERPELAMIAVQGPNAKAKAAAVFTDEQNAAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + N + LR+ Sbjct: 170 GMKPFFGVQSGSLFIATTGYTGEAGYEIIVPEAEAEALWQALLDNGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M +IG+E ++ I+ K ++ Sbjct: 230 EAGMNLYGQDM-DESVNPLAANMGWTIAWEPEDRDFIGREALAAIKAAGTD-KLVGLVME 287 Query: 210 TDDLPPSGSPIL---TDDIE------IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + +G P+ D +E GT +G ++A+AR+ + + + Sbjct: 288 AKGVLRTGMPVFFTDADGVEQQGAITSGTFSPTLG-YSIAMARVPNSVGDV-AEVEMRKK 345 Query: 261 GVRVKASFPH 270 V VK P Sbjct: 346 RVPVKVIAPS 355 >gi|296122702|ref|YP_003630480.1| glycine cleavage system T protein [Planctomyces limnophilus DSM 3776] gi|296015042|gb|ADG68281.1| glycine cleavage system T protein [Planctomyces limnophilus DSM 3776] Length = 363 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 106/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A FL + T D+ L R +L G IL L+ D Sbjct: 50 SHMGRLRFTGPDAREFLDEVQTVDLSKLKTGQIRYGFMLNESGGILDDILVYDWP-DAPQ 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER----- 119 L ++ S R+ L+ + R V IE + V+L+ H ++ + DE Sbjct: 109 LVVNASNREKLLAWMTPLATRYAVSIEDLTLTRVMLAVQGPHAIDIAAQLLGDEVRQLKY 168 Query: 120 -------FSIADVLLHRTWGHNE-------KIASDIKTYHE------------------- 146 +S VL+ RT E S + + Sbjct: 169 YTGKPMTWSNEPVLVSRTGYTGEDGVELIIDSGSALALWQAVLAAGESVGILPSGLGCRD 228 Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 LR+ + + I P A + I L+K +IG+ + +I I R R Sbjct: 229 TLRLEAAMPLYGHEL-SEEIDPLTAGLSF--AIKLSKPANFIGKTALEKIATGPIPRPRV 285 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + +P+++ + IG + K++A+A +D + + + Sbjct: 286 GLTLDGKRIAREKTPVVSGENIIGEVTSGTFSPTFQKSIAMAYVDAAFAEPGTRLEVDIR 345 Query: 261 GVRVKASF 268 G R A+ Sbjct: 346 GKRESATV 353 >gi|150006317|ref|YP_001301061.1| glycine cleavage system aminomethyltransferase T [Bacteroides vulgatus ATCC 8482] gi|294776320|ref|ZP_06741802.1| aminomethyltransferase [Bacteroides vulgatus PC510] gi|166221538|sp|A6L6X5|GCST_BACV8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|149934741|gb|ABR41439.1| aminomethyltransferase [Bacteroides vulgatus ATCC 8482] gi|294449837|gb|EFG18355.1| aminomethyltransferase [Bacteroides vulgatus PC510] Length = 361 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99 + ++ KL V + P Sbjct: 116 IEKDWNWCVSHNTVGAELENASDRMAQLAIQGPKAMEVLQKLTP------VNLSEIPYYA 169 Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146 + ++ SN+ + + A + + + Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G D T P +A + + K + + ++ + + + RK Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FTSRALLEKQKAEGLKRKLIAF 287 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 +P G ++ D +IG + K + + + A+ + + V G Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347 Query: 262 VRVKASF 268 ++KA Sbjct: 348 RKLKAVV 354 >gi|308048351|ref|YP_003911917.1| glycine cleavage system T protein [Ferrimonas balearica DSM 9799] gi|307630541|gb|ADN74843.1| glycine cleavage system T protein [Ferrimonas balearica DSM 9799] Length = 364 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L QG ++ + + + + Sbjct: 50 SHMTVVDVEGDDARAFLRKLLANDVAKLTVPGKALYGGMLNEQGGVIDDLITYYLSDTQY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R ++ + V I +P ++ ++ + + A Sbjct: 110 RLVVNSATRVKDLEWIGRQAQPFAVTITERPELAMIAVQGPNAKAKAATVFNAEQNAAVE 169 Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149 L + + + LR+ Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIVVPQNQAADLWQALLDAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D + P A M +IG+E + + K ++ Sbjct: 230 EAGMNLYGQDM-DEQVNPLAANMGWTIAWEPADRDFIGREALLAAKAAGTD-KLVGLVMT 287 Query: 210 TDDLPPSGSPIL---TDDIE------IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + +G + D +E GT +G A+A+AR+ K + + + Sbjct: 288 EKGVLRAGLNVFFTDADGVEHQGVITSGTFSPTLG-HAIAMARVPKGIGE-QAEVEMRKK 345 Query: 261 GVRVKASFP 269 V V+ P Sbjct: 346 RVAVQVVKP 354 >gi|62317431|ref|YP_223284.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 1 str. 9-941] gi|83269412|ref|YP_418703.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis biovar Abortus 2308] gi|189022685|ref|YP_001932426.1| glycine cleavage system aminomethyltransferase T [Brucella abortus S19] gi|237816984|ref|ZP_04595976.1| glycine cleavage system T protein [Brucella abortus str. 2308 A] gi|254698711|ref|ZP_05160539.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 2 str. 86/8/59] gi|254732157|ref|ZP_05190735.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 4 str. 292] gi|260544669|ref|ZP_05820490.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260759950|ref|ZP_05872298.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 4 str. 292] gi|260763188|ref|ZP_05875520.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 2 str. 86/8/59] gi|62197624|gb|AAX75923.1| GcvT, glycine cleavage system T protein [Brucella abortus bv. 1 str. 9-941] gi|82939686|emb|CAJ12679.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella melitensis biovar Abortus 2308] gi|189021259|gb|ACD73980.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella abortus S19] gi|237787797|gb|EEP62013.1| glycine cleavage system T protein [Brucella abortus str. 2308 A] gi|260097940|gb|EEW81814.1| glycine cleavage T protein [Brucella abortus NCTC 8038] gi|260670268|gb|EEX57208.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 4 str. 292] gi|260673609|gb|EEX60430.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 2 str. 86/8/59] Length = 367 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAKAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|46198456|ref|YP_004123.1| glycine cleavage system aminomethyltransferase T [Thermus thermophilus HB27] gi|59797794|sp|Q72LB1|GCST_THET2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|46196078|gb|AAS80496.1| aminomethyltransferase [Thermus thermophilus HB27] Length = 349 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 52/303 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ A+ FLQ D L A+ S + +G ++ + ++ E+ ++ Sbjct: 49 SHMGEFLVRGEEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-NSSFIDERFS---I 122 + ++ + + L V +E +L+ + +D S Sbjct: 109 MVVNAANIAKDLAHLQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRK 168 Query: 123 ADVLLHRTWGHNEKIA---------------------------------SDIKTYHELRI 149 DV R G ++A + + LR+ Sbjct: 169 NDVFPARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALVEAGAKPAGLGARDSLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + P + + ++G+E + R+R + + Sbjct: 229 EAGFPLYGHELT-EETNPLCTPWAW---VVKKEKAFLGKEAML----AQACRERLVGLVL 280 Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G +L+ +G + + ++ +A+A V+ + + V G V Sbjct: 281 EGGIPREGYRVLSGGCPVGRVTSGGYSPLLQRGIALA---YVEEGAEGPFQVEVRGRAVP 337 Query: 266 ASF 268 A+ Sbjct: 338 AAL 340 >gi|313203098|ref|YP_004041755.1| aminomethyltransferase [Paludibacter propionicigenes WB4] gi|312442414|gb|ADQ78770.1| aminomethyltransferase [Paludibacter propionicigenes WB4] Length = 356 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + DV LP A+ S +G I+ L+ EE+ ++L ++ S Sbjct: 56 VKGPNALAFLQKVTSNDVSVLPLGKAQYSCFPNGKGGIVDDLLVYHFEENKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|315504479|ref|YP_004083366.1| glycine cleavage system t protein [Micromonospora sp. L5] gi|315411098|gb|ADU09215.1| glycine cleavage system T protein [Micromonospora sp. L5] Length = 395 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 88/311 (28%), Gaps = 53/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ I+V G A F+ A +T D+ + A+ + G ++ + +D Sbjct: 84 SHLGKIRVTGPGAADFVNACLTNDLGRITPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 143 Query: 66 ILEIDRS----------------------------------KRDSLIDKLLF-----YKL 86 L + + + L+ L Y Sbjct: 144 FLVPNAANTAEVARRLRAAAPAGVAVTDEHEAYAVLAVQGPRSAELLGALGLPTGHDYMS 203 Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 S ++ + V + ++A V ++ A + Sbjct: 204 FSTATLD--GVELTVCRTGYTGELGYELVVASEHAVA-VWDALFAAADDVRACGLAARDT 260 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR G D P I P + K + G++ + + R + Sbjct: 261 LRTEMGYPLHGQDLSPE-ITPVQGRSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGL 317 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID-KVDHAIKKGMALTV 259 +P G + D ++GT+ ALA+ D K+ + + + Sbjct: 318 TAVDRAIPRPGMAVYAGDRQVGTVTSGTFSPTLKHGVALALVDTDPKLADGDELEVDIRG 377 Query: 260 HGVRVKASFPH 270 R++ + P Sbjct: 378 RRARMRLTRPP 388 >gi|21243788|ref|NP_643370.1| glycine cleavage system aminomethyltransferase T [Xanthomonas axonopodis pv. citri str. 306] gi|24636852|sp|Q8PI37|GCST_XANAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|21109379|gb|AAM37906.1| glycine cleavage T protein [Xanthomonas axonopodis pv. citri str. 306] Length = 369 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 109/308 (35%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + R +V +E + ++ +D + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169 Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 ++ L RT E + + ++ Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTGEDGFEIVLPQQAAVAFWNALLAQGVKPAGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + R+ Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT + E GT +G KA+A AR+ + + + Sbjct: 288 GVVMDEKGVLRHGQTVLTANGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345 Query: 261 GVRVKASF 268 V ++A Sbjct: 346 QVPLRAVK 353 >gi|238759294|ref|ZP_04620460.1| Aminomethyltransferase [Yersinia aldovae ATCC 35236] gi|238702455|gb|EEP95006.1| Aminomethyltransferase [Yersinia aldovae ATCC 35236] Length = 348 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + R+ +D ++ + V + ++ +V ++ + Sbjct: 93 RLVVNSATREKDLDWIIQHAEPYQVEVTVRDDLALVAVQGPTAQQKVATLLTP 145 >gi|218260322|ref|ZP_03475694.1| hypothetical protein PRABACTJOHN_01356 [Parabacteroides johnsonii DSM 18315] gi|218224607|gb|EEC97257.1| hypothetical protein PRABACTJOHN_01356 [Parabacteroides johnsonii DSM 18315] Length = 361 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 95/305 (31%), Gaps = 56/305 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ F+Q I + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQGITSNDASVLPIGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94 ++ +L L S V E Sbjct: 116 IAKDWDWCVSHNTVGAELENSSDRTAQLAIQGPKAVEVLQRLTPVDLSSIPYYAFVTGEF 175 Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150 V++S + F ++D+ +I + + G E I + LR+ Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYLDDAMTIWNAIFE--AGKPEGIKPIGLGARDTLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G D T P +A + + K + + + R + + RK Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRAELERQKKEGVTRKLCAFELVD 291 Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G I +D IG + + + + + + + V G Sbjct: 292 KGIPRHGYEIADAEDNIIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTE--ICIKVRGRN 349 Query: 264 VKASF 268 +KA Sbjct: 350 LKAQV 354 >gi|33599843|ref|NP_887403.1| glycine cleavage system aminomethyltransferase T [Bordetella bronchiseptica RB50] gi|59797852|sp|Q7WP31|GCST_BORBR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33567440|emb|CAE31353.1| glycine cleavage system T protein [Bordetella bronchiseptica RB50] Length = 366 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 14/156 (8%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++ Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 D I + + +G ++ + + Sbjct: 118 AGTADKDIAWMQR----------VAAADGFDVAIAPRRDLAMVAVQGPNARAKVWAARPA 167 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 W + + + + + G + T + F Sbjct: 168 W---QAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200 >gi|258625496|ref|ZP_05720388.1| aminomethyltransferase [Vibrio mimicus VM603] gi|258582202|gb|EEW07059.1| aminomethyltransferase [Vibrio mimicus VM603] Length = 416 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 102/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D Sbjct: 97 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 155 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ + ++ I L + L ++V +E+ ++ + Sbjct: 156 VVVNAACKEQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLSRLQPAVANMLFMD 214 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150 + I R + +K A+ + LR+ Sbjct: 215 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 274 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G E++ S+I+ + + RKR Sbjct: 275 CGLCLYGHDLDQTTSPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 334 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + +IG + ++A + + + Sbjct: 335 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVR 394 Query: 259 VHGVRVKASF 268 + + Sbjct: 395 GKMLPMTVEK 404 >gi|254372468|ref|ZP_04987957.1| glycine cleavage complex protein T [Francisella tularensis subsp. novicida GA99-3549] gi|151570195|gb|EDN35849.1| glycine cleavage complex protein T [Francisella novicida GA99-3549] Length = 358 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I+ Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVTIKPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|332300415|ref|YP_004442336.1| Aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707] gi|332177478|gb|AEE13168.1| Aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707] Length = 363 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + D L + S T QG +L FL+ + EE+ ++L + + Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEENKYMLVPNAAN 116 Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92 K ++ +L L V Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKIGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151 P N ++ + + +++ G E I + + LR+ Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D ++ + + ++ K +G+E + + + + RK Sbjct: 236 GFCLYGNDIDDQHT-SLESGLGWITKLTDNKPDLVGREALLKQKAEGLTRKLVAFEMVDK 294 Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P I+ + +IG + + + K +A+ + Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354 Query: 265 KASFPH 270 K P Sbjct: 355 KVVKPP 360 >gi|313887101|ref|ZP_07820797.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923330|gb|EFR34143.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I] Length = 363 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + D L + S T QG +L FL+ + EE+ ++L + + Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEENKYMLVPNAAN 116 Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92 K ++ +L L V Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKVGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151 P N ++ + + +++ G E I + + LR+ Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D ++ + + ++ K +G+E + + + + RK Sbjct: 236 GFCLYGNDIDDQHT-SLESGLGWITKLTDNKPDLVGREALLKQKAEGLTRKLVAFEMVDK 294 Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P I+ + +IG + + + K +A+ + Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354 Query: 265 KASFPH 270 K P Sbjct: 355 KVVKPP 360 >gi|281210648|gb|EFA84814.1| aminomethyltransferase [Polysphondylium pallidum PN500] Length = 407 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 105/315 (33%), Gaps = 57/315 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK + F ++I+ AD+ LP ++ S T QG I+ +I+ E+ ++ Sbjct: 82 SHMGQLRIHGKDRVEFFESIVVADIQALPVGHSKLSVFTTEQGGIIDDTMITNAGENLYV 141 Query: 67 LEIDRSKRDSLIDKL--LFYKLRS---NVIIEIQPINGVVLSWNQEH----------TFS 111 + ++ D I + + ++ +V +E+ ++ S Sbjct: 142 V-VNAGCADKDIAHIKQKMAEFKATGKDVSLELMEDQALIAVQGPSTESIVSKLAKLDLS 200 Query: 112 NSSFIDERFSIAD--------------------------VLLHRTW---GHNEKIASDIK 142 N F+ +R + D V L + G + + Sbjct: 201 NMEFMTQRHAKIDNIDVIITRCGYTGEDGFEISVSNSNAVRLAKILLDTGVEGVKCAGLG 260 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNI 199 LR+ G+ D I P +A + L IS + G + G V+ + + Sbjct: 261 ARDSLRLEAGLCLYGHDL-NEEITPIEATLGWL--ISKRRKEAGGFPGAAVIQKQLKEGV 317 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253 +KR +I + + +IG + ++ + + K Sbjct: 318 SKKRVGLIVEGPPARENTVLVDEAGKQIGHVTSGTLSPMTKQSISMCYLNTEHSKNGTKV 377 Query: 254 GMALTVHGVRVKASF 268 ++ + S Sbjct: 378 FASIRGRQIPAVVSK 392 >gi|189467771|ref|ZP_03016556.1| hypothetical protein BACINT_04163 [Bacteroides intestinalis DSM 17393] gi|189436035|gb|EDV05020.1| hypothetical protein BACINT_04163 [Bacteroides intestinalis DSM 17393] Length = 361 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 106/301 (35%), Gaps = 48/301 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKVQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D + ++ I+ +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K ++ LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGEEFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K +I + ++ + + +RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FINRPMLEKQKAEGTVRKLVGFEMVERG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +P G + T+ IG + K + + + + + + + G ++KA Sbjct: 294 IPRHGYELFNTEGEAIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353 Query: 268 F 268 Sbjct: 354 V 354 >gi|114769617|ref|ZP_01447227.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha proteobacterium HTCC2255] gi|114549322|gb|EAU52204.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha proteobacterium HTCC2255] Length = 814 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 95/325 (29%), Gaps = 70/325 (21%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 +S+ I++ G+ A FL DV S L G I I+ Sbjct: 486 LYDMSSFGKIRIEGRDATGFLNFVAAGQY--DV---EIGKIVYSQFLNNTGGIEADVTIT 540 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL------------ 102 ++ E +++ + R + L + + VI ++ GV+ Sbjct: 541 RLSETAYLVVTPAATRLADQIWLSRNVGNFNV---VITDVTAGEGVLAVMGPNSRKLLQM 597 Query: 103 -------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------ 143 QE R + L + +++ T Sbjct: 598 VSPNRFDNEVNPFGTAQEIEIGMGLARVHRVTYVGELGWEIYASSDQAGHIFDTIFEAGQ 657 Query: 144 -----------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 LRI G D +A + + K +IG++ V Sbjct: 658 DVGMKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVL 714 Query: 193 RIQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--R 243 R + + R+ ++ ++ L PIL D + +G L L + Sbjct: 715 RKKENGLDRRLLQFVLNDSEPLLYHNEPILRDGVLVGHLTSGNYGHTIGAAIGLGYVPCK 774 Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268 + V + + V GV++ A+ Sbjct: 775 NEAVSDILSSTYEIDVAGVKIAANV 799 >gi|33591440|ref|NP_879084.1| glycine cleavage system aminomethyltransferase T [Bordetella pertussis Tohama I] gi|59797850|sp|Q7W0E5|GCST_BORPE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33571082|emb|CAE40574.1| glycine cleavage system T protein [Bordetella pertussis Tohama I] gi|332380841|gb|AEE65688.1| glycine cleavage system aminomethyltransferase T [Bordetella pertussis CS] Length = 366 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 14/156 (8%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++ Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 D I + + VV++ + + + + A + Sbjct: 118 AGTADKDIAWMQR--------VAAADGFDVVIA-----PRRDLAMVAVQGPNARAKVWAA 164 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 + + + + + G + T + F Sbjct: 165 RPAWQAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200 >gi|297184315|gb|ADI20432.1| glycine/d-amino acid oxidases (deaminating) [uncultured alpha proteobacterium EB080_L43F08] Length = 814 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 95/325 (29%), Gaps = 70/325 (21%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 +S+ I++ G+ A FL DV S L G I I+ Sbjct: 486 LYDMSSFGKIRIEGRDATGFLNFVAAGQY--DV---EIGKIVYSQFLNNTGGIEADVTIT 540 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL------------ 102 ++ E +++ + R + L + + VI ++ GV+ Sbjct: 541 RLSETAYLVVTPAATRLADQIWLSRNVGNFNV---VITDVTAGEGVLAVMGPNSRKLLQM 597 Query: 103 -------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------ 143 QE R + L + +++ T Sbjct: 598 VSPNRFDNEVNPFGTAQEIEIGMGLARVHRVTYVGELGWEIYASSDQAGHIFDTIFEAGQ 657 Query: 144 -----------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 LRI G D +A + + K +IG++ V Sbjct: 658 DVGMKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVL 714 Query: 193 RIQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--R 243 R + + R+ ++ ++ L PIL D + +G L L + Sbjct: 715 RKKENGLDRRLLQFVLNDSEPLLYHNEPILRDGVLVGHLTSGNYGHTIGAAIGLGYVPCK 774 Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268 + V + + V GV++ A+ Sbjct: 775 NEAVSDILSSTYEIDVAGVKIAANV 799 >gi|153833016|ref|ZP_01985683.1| glycine cleavage system T protein [Vibrio harveyi HY01] gi|148870737|gb|EDL69643.1| glycine cleavage system T protein [Vibrio harveyi HY01] Length = 376 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + ++ I L + L S + +EI ++ + + F E + Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + G E + LR+ Sbjct: 176 VRKVELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D P + + G + G +++ + I+ +++ RKR Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + D +IG + ++ R D + + Sbjct: 296 LVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355 Query: 259 VHGVRVKASF 268 + + Sbjct: 356 GKMLPMTVEK 365 >gi|17560118|ref|NP_504502.1| hypothetical protein F25B4.1 [Caenorhabditis elegans] gi|1458286|gb|AAB37080.1| Hypothetical protein F25B4.1 [Caenorhabditis elegans] Length = 402 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 96/310 (30%), Gaps = 56/310 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK + F++++ TADV L S +G I +I K ++D L + Sbjct: 82 ITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAGC 141 Query: 74 RDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQE--------------------- 107 + + L RS V IE G+V E Sbjct: 142 IEKDLPYLQENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKT 201 Query: 108 -----------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--SDIKTYHELR 148 +T + I + A+ L+ R + + LR Sbjct: 202 TVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAGLGARDALR 261 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPMI 206 + G+ +D +T P +A + + + + G E +V +++ ++ ++R + Sbjct: 262 LEAGLCLYGSDIEENTT-PIEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSWPKRRVGL 320 Query: 207 ITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 + P S P++ D IG + A+A K + Sbjct: 321 LAPAGRCPRSHLPLIDPLDKCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIGTKFVVDFG 380 Query: 259 VHGVRVKASF 268 V+ Sbjct: 381 AKQAPVEVVK 390 >gi|33595459|ref|NP_883102.1| glycine cleavage system aminomethyltransferase T [Bordetella parapertussis 12822] gi|59797851|sp|Q7W1C6|GCST_BORPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33565537|emb|CAE40178.1| glycine cleavage system T protein [Bordetella parapertussis] Length = 366 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 14/156 (8%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++ Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGRALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 D I + + +G ++ + + Sbjct: 118 AGTADKDIAWMQR----------VAAADGFDVAIAPRRDLAMVAVQGPNARAKVWAARPA 167 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166 W + + + + + G + T + F Sbjct: 168 W---QAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200 >gi|297620507|ref|YP_003708644.1| Aminomethyltransferase [Waddlia chondrophila WSU 86-1044] gi|297375808|gb|ADI37638.1| Aminomethyltransferase [Waddlia chondrophila WSU 86-1044] Length = 363 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 57/313 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A + + T +L A + G + ++ + ++F Sbjct: 56 SHMGRVLIKGPGAEKLMDYLSTNRILGKKEFTATYTVWCDRSGGCIDDLIVYREGPESFF 115 Query: 67 LEIDRSKRDSLIDKLL-----------------------------FYKLRSN-------- 89 + ++ R+ ++ L +L S Sbjct: 116 IVVNAGNREKDLNHLKEVAKDFDASIEERYQDGILAVQGPNAKPLMSRLFSEAEGLKPMH 175 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYH 145 V+IE Q VVLS +IA L R + + Sbjct: 176 FVLIEDQ----VVLSGTGYTGSGGYELYGPMDAIAP-LWDRLLEEGQAFGIQPVGLGARD 230 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G + + I P++++ + K ++G++ + ++ R + Sbjct: 231 TLRLEMGFPLYGHEL-SADIAPNESVASW--AVKWDKEDFLGRQALESLEASGSKRTQAG 287 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 +I + G + + +IGT+ K+A+AI ++ + + + + G Sbjct: 288 VILKEKGIAREGCGVFRGEKKIGTVTSGTMSPSLKQAIAIILVE-GKIVSGETIDIEIRG 346 Query: 262 VRVKAS---FPHW 271 RVKA P W Sbjct: 347 KRVKAEIVPLPFW 359 >gi|269963351|ref|ZP_06177681.1| aminomethyltransferase [Vibrio harveyi 1DA3] gi|269831925|gb|EEZ86054.1| aminomethyltransferase [Vibrio harveyi 1DA3] Length = 376 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + ++ I L + L S + +EI ++ + + F E + Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + G E + LR+ Sbjct: 176 VRKVELLGGECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D P + + G + G +++ + I+ +++ RKR Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + D +IG + ++ R D + + Sbjct: 296 LVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355 Query: 259 VHGVRVKASF 268 + + Sbjct: 356 GKMLPMTVEK 365 >gi|238795228|ref|ZP_04638813.1| Aminomethyltransferase [Yersinia intermedia ATCC 29909] gi|238725448|gb|EEQ17017.1| Aminomethyltransferase [Yersinia intermedia ATCC 29909] Length = 348 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 51/127 (40%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ ++ED F Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLQEDYF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + RD + ++ + V + ++ +V ++ + A Sbjct: 93 RLVVNSATRDKDLAWIIQHAEPYQVEVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAVA 152 Query: 126 LLHRTWG 132 + +G Sbjct: 153 GMKPFFG 159 >gi|325971841|ref|YP_004248032.1| Aminomethyltransferase [Spirochaeta sp. Buddy] gi|324027079|gb|ADY13838.1| Aminomethyltransferase [Spirochaeta sp. Buddy] Length = 372 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 95/284 (33%), Gaps = 56/284 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G+SA +L + T + + R + + P G ++ LI + + +F++ ++ S Sbjct: 58 VSGESADAYLDYLCTNSISDMAVGQCRYTLMCYPNGTVVDDLLIYRRTDTSFLVVMNASN 117 Query: 73 ------------------------------------KRDSLIDKL-------LFYKLRSN 89 + ++ L + RS Sbjct: 118 TPKDLAWIKTDNPHAHLCPQVVDLSDATVQLALQGPLAEQILSTLVTDCASIKSFTFRSQ 177 Query: 90 VIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 E+ I ++ + E F D+ + D LL I + + L Sbjct: 178 C--EVGEIMALISRTGYTGEDGFELYCASDDGPLLWDTLLE-AGKAYGLIPCGLGSRDTL 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ + + +I P +A + + + L K + G+E + + Q I R I Sbjct: 235 RMEAKLPLYGHEI-SDSITPLEANLGVF--VKLEKADFCGREALLKQQEEGIPRTLRGIE 291 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKV 247 +P +G +L D +IG + L A A ID+ Sbjct: 292 MLDKAVPRNGYRVLLDGRDIGYVTSGNKSPTLGIFCAYALIDRA 335 >gi|156977182|ref|YP_001448088.1| glycine cleavage system protein T2 [Vibrio harveyi ATCC BAA-1116] gi|156528776|gb|ABU73861.1| hypothetical protein VIBHAR_05968 [Vibrio harveyi ATCC BAA-1116] Length = 376 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 98/310 (31%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118 + ++ + ++ I L + L S + +EI ++ + + F E Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175 Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + G E + LR+ Sbjct: 176 VRKVELLGVECIISRSGYTGEDGYEISVPAEKAEELARKLTGEEEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D P + + G + G +++ + I+ +++ RKR Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + + +IG + ++ R D + + Sbjct: 296 LVGQTKAPVREGAELFDAEGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355 Query: 259 VHGVRVKASF 268 + + Sbjct: 356 GKMLPMTVEK 365 >gi|317508218|ref|ZP_07965898.1| glycine cleavage system T protein [Segniliparus rugosus ATCC BAA-974] gi|316253393|gb|EFV12783.1| glycine cleavage system T protein [Segniliparus rugosus ATCC BAA-974] Length = 375 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 99/315 (31%), Gaps = 55/315 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ ++ D+ + A+ + L P G ++ + + ++ Sbjct: 58 SHLGKALVAGPGAAEFVNRTLSNDLARIRPGKAQYTLCLAPDGGVIDDLIAYYVSDEEIF 117 Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRSNVI--IEIQPINGVVLSWNQ---- 106 L + + S++ L Y + + V + + + + + Sbjct: 118 LVPNAANTASVVAALQAVAPPEIQVTDEHRDYAVFA-VQGPLAKEAVERAGFAVPEEYMA 176 Query: 107 --EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---ASDIK 142 E T+ S+ + +S+A + +K+ + + Sbjct: 177 YTEETWDGSAGKQAPVKVCRTGYTGEQGYEVIPPWSVASEVFTALLNEVQKLGGEPAGLG 236 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G + I P A + I K + G+E V + R R Sbjct: 237 ARDTLRTEMGYALHGHELALD-ISPVQAGVAW--AIGWKKPEFFGREAVVAEKERGPART 293 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDH-AIKKGMAL 257 + +P G + + +G + +A+A +D + +++ Sbjct: 294 LLGLKALESGVPRRGYTVRKGEASVGEVTSGTFSPTLKTGVALALVDSASGVEVGDEVSI 353 Query: 258 TVHG--VRVKASFPH 270 V G +R + P Sbjct: 354 DVRGRALRCEVVTPP 368 >gi|237784920|ref|YP_002905625.1| glycine cleavage system aminomethyltransferase T [Corynebacterium kroppenstedtii DSM 44385] gi|237757832|gb|ACR17082.1| glycine cleavage system T protein [Corynebacterium kroppenstedtii DSM 44385] Length = 379 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 103/306 (33%), Gaps = 60/306 (19%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A L A+I+ + + A+ S + T G I+ + ++ +D Sbjct: 63 LSHMGEVRVSGPQAAEALDHALISR-LSAVAVGKAKYSMMCTEDGTIIDDLITYRLADDE 121 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV-------------IIEIQPING--VVLSWNQE-- 107 F++ + ++ KL R+ +I +Q N V+ S Sbjct: 122 FLVIPNAGNAPTVASKL---VSRAEAFDCTVADESSETSLIAVQGPNAERVLASLPGADV 178 Query: 108 -------------HTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASD 140 T + I R + G + Sbjct: 179 RNLAEVKYYAFFRGTVAGHDVIIARTGYTGEDGFEIFVPNSGAHDVWAAIMGTDAVTPCG 238 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + LR+ G+ + S P DA + +L +K ++G++ + + Sbjct: 239 LASRDTLRLEAGMPLYGHELDRSHT-PVDAGLGVLAATK-SKDAFVGRDAIVAAKKNGAA 296 Query: 201 RKRPMIITGTDDLPPSG--SPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254 +K + + G + + +DD E+G + L A+A +D + G Sbjct: 297 QK-LVGLKGDGRRAARAGYTVLTSDDKEVGEVTSGALSPTLGYPVAMAYVD--ADVAEPG 353 Query: 255 MALTVH 260 AL+V Sbjct: 354 TALSVD 359 >gi|166712888|ref|ZP_02244095.1| glycine cleavage system aminomethyltransferase T [Xanthomonas oryzae pv. oryzicola BLS256] Length = 369 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 63/173 (36%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMNEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + R +V +E + ++ ++ + A Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLEPADTAAAS 169 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R + I+ + G + + P +A + N + Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216 >gi|297153778|gb|ADI03490.1| putative dehydrogenase [Streptomyces bingchenggensis BCW-1] Length = 812 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 105/310 (33%), Gaps = 61/310 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 ++V G+ A LQ + TA+V + +L G I ++++ F Sbjct: 500 LEVTGRGAAGLLQRMTTANVDK-SVGSVTYTLMLDHNGGIRSDITVARLGRGHFQVGAGG 558 Query: 67 -LEID-------------------------------RSKRDSLIDK------LLFYKLRS 88 L++D R L D+ L +++ R Sbjct: 559 NLDLDWLTRHLPEDGSVTVRDITGGTCCIGLWGPKARDMLQPLADQDFSNAGLRYFRAR- 617 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + LS+ E + + D + D L + IA+ ++ LR Sbjct: 618 KAHIGPVPVTAMRLSYVGELGWELYTTADMGLKLWD-TLWEAARPHGGIAAGRGAFNSLR 676 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G TD P++A + + + KG +IG+ + R +R+R + +T Sbjct: 677 LEKGYRSFGTDMTYEHD-PYEAGVGF--AVKMDKGDFIGRAALER--RAADVRRRLVCLT 731 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH-- 260 D + P+ +G + K +A A + G +LT+ Sbjct: 732 IDDPHAVVMGKEPVYDGARPVGYVTSAAYGYTIGKGIAYAWL--PADLATAGRSLTIGYF 789 Query: 261 GVRVKASFPH 270 RV A+ Sbjct: 790 DQRVPAAVAE 799 >gi|15807654|ref|NP_295535.1| aminomethyltransferase, putative [Deinococcus radiodurans R1] Length = 447 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 33/264 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ FLQ + DV L A+ + + +G ++ I D ++ Sbjct: 180 SHMGEFRVTGPDALKFLQHVTPNDVSKLRPGRAQYNWLPNERGGLVDDIYIYMAAPDEYL 239 Query: 67 LEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFS------------- 111 + ++ D L L + +V + + N +L+ + Sbjct: 240 MVVNAGNIDKDWAHLN--ALTAGYDVQLANESDNWALLAVQGPQAAALLQPHTDVDLSAK 297 Query: 112 -NSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTD---- 159 +++ + DV L RT E A + EL + GI Sbjct: 298 KKNAYFAAKLFGHDVRLARTGYTGEDGFEVFVDAAQAEALWDEL-LALGITPAGLGARDT 356 Query: 160 FLPSTIFP---HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 FP H+ D+ S +E R + ++ + + Sbjct: 357 LRLEAGFPLYGHEFGDDIHPLSSHYSWVVKDKEHHGRAGLQAAPTQKLIGLKLDKVPVRE 416 Query: 217 GSPILTDDIEIGTLGVVVGKKALA 240 G P+ +G + L Sbjct: 417 GYPVKVGGEVVGRVTSGTTSPTLG 440 >gi|325922378|ref|ZP_08184152.1| aminomethyltransferase [Xanthomonas gardneri ATCC 19865] gi|325547160|gb|EGD18240.1| aminomethyltransferase [Xanthomonas gardneri ATCC 19865] Length = 379 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 7/173 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + E+ F Sbjct: 60 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMSEEFF 119 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + R +V +E + ++ +D S A Sbjct: 120 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIELVDPADSAAAS 179 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 L R I + G + + P DA + N + Sbjct: 180 KLGRFAALQTHSRDGIALFLARTGYTG------EDGFEIVLPQDAAVAFWNAL 226 >gi|254437506|ref|ZP_05051000.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] gi|198252952|gb|EDY77266.1| Glycine cleavage T-protein (aminomethyl transferase) [Octadecabacter antarcticus 307] Length = 812 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 68/320 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G A FL V ++P + L +G I ++++ Sbjct: 487 MSSFGKIRVEGPDAEGFL-----NYVGGGDYSVPVGKIVYTQFLNHRGGIEADVTVTRMS 541 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102 E +++ + R L D++ + R + VI ++ GV+ Sbjct: 542 ETAYLVVTPAATR--LADQVWMERTRGDFNVVITDVTAGEGVLAVMGPNARKLLQAVSPA 599 Query: 103 ---------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147 Q+ R + L + ++ +T H Sbjct: 600 DFTNAVNPFGTAQDIEIGMGVARVHRVTYVGELGWEVYISADQAGHVFETLHAAGQDFEL 659 Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 RI G D +A + + K +IG+E V Q Sbjct: 660 TLCGMHMMDTCRIEKGFRHFGHDITCEDHV-MEAGLGF--AVKKDKPDFIGREAVLEKQE 716 Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIA--RIDKV 247 + + +T + L PIL D +G L G L + + Sbjct: 717 SGLNMRMVQFKLTDPEPLLYHNEPILRDGELVGYLSSGGYGHTLGGAMGLGYVPCKGETA 776 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + G + V G +V+A Sbjct: 777 ADVLASGYEIDVMGTKVRAE 796 >gi|126740939|ref|ZP_01756623.1| putative oxidoreductase protein [Roseobacter sp. SK209-2-6] gi|126718039|gb|EBA14757.1| putative oxidoreductase protein [Roseobacter sp. SK209-2-6] Length = 809 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 47/276 (17%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS + I V G A+ LQ + TA V + A +A L +G + ++++ Sbjct: 485 LIDLSMFTKINVSGPDALALLQWVSTAHVD-VAEGRAVYTAWLNQRGGVEADLTVTRLGS 543 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSN---VII-EIQPINGVVLSWNQEHTFSNSSFIDE 118 + F + + R + L R V + ++ V+ D+ Sbjct: 544 NLFRVTSGAATRRKDLYWLQKQA-RIKGFDVTLQDVTESEAVIGVMGPRARALLQDLSDD 602 Query: 119 -----------------------RFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147 R S L + + Sbjct: 603 NWQEFDFSTARRVTVAGIECSATRISFVGELGWEIAMPAVQAPVLFDAFRAEGAGLLGIH 662 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D P I P +A + ++ TKG ++G+ +++ + + R+ Sbjct: 663 ALDGCRIEKGFKHWGHDLGPD-ISPLEAGIGF--AVNWTKGDFLGRIALAKQKQDGLTRR 719 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238 + ++ + L P+ D +G G + Sbjct: 720 QLLLEVEGEALLLHDEPVWERDKRVG--LTSSGARG 753 >gi|29829315|ref|NP_823949.1| glycine cleavage system aminomethyltransferase T [Streptomyces avermitilis MA-4680] gi|34921583|sp|Q82JI2|GCST_STRAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|29606422|dbj|BAC70484.1| putative glycine cleavage system protein T [Streptomyces avermitilis MA-4680] Length = 372 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + ++ AR + I G IL ++ +++E T Sbjct: 53 LSHMGEITVTGPGAAALLNYALVGN-IASVGVGRARYTMICRADGGILDDLIVYRLQEQT 111 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 +++ + S ++D L V+ + + ++ E S D Sbjct: 112 YLVVANASNAQVVLDALTERAGGFDAVVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 171 Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 + L+ RT E A K + Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPADAEKLWQALTEAGAPAGLVPCGLSC 231 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199 LR+ G+ + ++ P DA + + + K G ++G+ + + +N Sbjct: 232 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKEGDFVGREALTEAAALAEKNP 288 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 R +I +P +G P++ IG + + +A+A +D A Sbjct: 289 PRVLVGLIAEGRRVPRAGYPVVVGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHAA 343 >gi|188990672|ref|YP_001902682.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. campestris str. B100] gi|167732432|emb|CAP50626.1| Glycine cleavage T protein [Xanthomonas campestris pv. campestris] Length = 403 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 52/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ ++E+ F Sbjct: 84 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFF 143 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + RD + + R V +E + ++ +D + A Sbjct: 144 RLVVNAATRDKDLQWIGEQAARFEVRVEERADFAMIAVQGPNARSKVIDLLDPADASAAS 203 Query: 126 LLHRTWGHNEKI-------------------------ASDIKTYHELRINHGIVDPNT-- 158 L R + A + ++ L + HG+ Sbjct: 204 KLGRFAALQTRTRDGVALFLARTGYTGEDGFEIVLPQADAVAFWNAL-LAHGVAPAGLGA 262 Query: 159 --------------DFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 + + P++A + I+L +G +IG+ V+ + + R+ Sbjct: 263 RDTLRLEAGMNLYGQDMDDDVTPYEAALAWT--ITLDEGRDFIGRSVLESQKAQGAARQM 320 Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 ++ + G +L+ E GT +G KA+A AR+ + + Sbjct: 321 IGVVMDEKGVLRHGQKVLSAGGEGEILSGTFSPTLG-KAIAFARV-PAGSIDDLRVDIRG 378 Query: 260 HGVRVKASF 268 V ++A Sbjct: 379 KQVPLRAVK 387 >gi|163858394|ref|YP_001632692.1| glycine cleavage system aminomethyltransferase T [Bordetella petrii DSM 12804] gi|229807547|sp|A9I7L6|GCST_BORPD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|163262122|emb|CAP44424.1| glycine cleavage system T protein [Bordetella petrii] Length = 366 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G A FL+ ++ DV L A S +L PQG I+ ++ D + + ++ Sbjct: 58 VDVTGPDATAFLRRLVANDVARLTVPGKALYSCMLNPQGGIIDDLIVYFFAADQWRVVVN 117 Query: 71 RSKRDSLIDKLLF 83 + D + + Sbjct: 118 AATADKDVAWMQR 130 >gi|170288534|ref|YP_001738772.1| glycine cleavage system T protein [Thermotoga sp. RQ2] gi|238688827|sp|B1L9U1|GCST_THESQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|170176037|gb|ACB09089.1| glycine cleavage system T protein [Thermotoga sp. RQ2] Length = 364 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 65/304 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ F+ +IT + +LP A S + G I+ ++ K+ D + Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNNFSSLPDGKALYSVMCNENGGIIDDLVVYKVSPDEAL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + ++ + + + + + S V + I ++ + +++ Sbjct: 109 MVVNAANIEKDFNWIKSH---SKNFNVEVSNISDTTALIAFQGPRAQEALQELVEDSLEE 165 Query: 123 -------------ADVLLHRTWGHNE-------KIASDIKTYHEL--------------- 147 + ++ RT E + + K + L Sbjct: 166 IAYYSFKKSIVAGVEAIVSRTGYTGEDGFELMIEAKNSPKVWDALMNLLRKIDGRPAGLG 225 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 R+ + D P + + + + L K ++G+E + ++ + + + Sbjct: 226 ARDVCRLEATYLLYGQDM-DENTNPFEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVER 279 Query: 203 RPMIITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 + + + + + G + + +G + ALA+ V ++K G Sbjct: 280 KLVALELSGKRIARKGYEVSKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKIGD 334 Query: 256 ALTV 259 L V Sbjct: 335 QLGV 338 >gi|226941640|ref|YP_002796714.1| glycine cleavage system aminomethyltransferase T [Laribacter hongkongensis HLHK9] gi|226716567|gb|ACO75705.1| GcsT [Laribacter hongkongensis HLHK9] Length = 368 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 97/309 (31%), Gaps = 54/309 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A +L+ +I DV L A S +L G ++ ++ + Sbjct: 53 SHMTVVDLTGPDAQAYLRRLIANDVAKLAPLGKALYSGMLNAAGGVIDDLIVYLTA-WGY 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------------- 108 + ++ + RD + + +V + +P ++ Sbjct: 112 RVVVNAATRDKDLAWMQAQAASFDVTLTERPELAMLAVQGPCAISKFCAARPACAALVQS 171 Query: 109 ----------TFSNSSFIDER------------FSIAD-VLLHRTWGHNEKIASDIKTYH 145 T + R AD L + + Sbjct: 172 LSIFQGLPCCTDGPDGWFVARTGYTGEDGLEIMLPAADAAALWQDLLAAGVAPCGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D +I P A M + +IG++V+ + R + K+ Sbjct: 232 TLRMEAGMNLYGHDM-DESISPLKAGMGWTIDLKDAGRQFIGRDVIEAQKARGVSMKQVG 290 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259 ++ + G ++ D G G K+A+AIAR V A A+ V Sbjct: 291 LVLEGRGVLREGMKVVVDG--AGEGITTSGTFSPTLKQAIAIAR---VPAATTDRAAVEV 345 Query: 260 HGVRVKASF 268 G V A Sbjct: 346 RGQLVAARV 354 >gi|325274662|ref|ZP_08140713.1| glycine cleavage system aminomethyltransferase T [Pseudomonas sp. TJI-51] gi|324100204|gb|EGB97999.1| glycine cleavage system aminomethyltransferase T [Pseudomonas sp. TJI-51] Length = 360 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 6/137 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E + Sbjct: 50 SHMTVIDVDGSDATAWLQRLLANDVARLVDTGKALYSPLLQAQGGVIDDLIVYRTEH-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + R ++ L + V +++P ++ + S A Sbjct: 109 RLVTNAATRAKVLGWLQQQRDGFAVDFKVRPDLAILAIQGPRAREK----VAPLLSAARA 164 Query: 126 LLHRTWGHNEKIASDIK 142 L R E A Sbjct: 165 ALIRELRPFEGFAEGDW 181 >gi|154251405|ref|YP_001412229.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] gi|154155355|gb|ABS62572.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum lavamentivorans DS-1] Length = 433 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 96/302 (31%), Gaps = 56/302 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G+ A P+L ++T + L A + G +L ++ +++ED + L + + Sbjct: 105 RIAGRDARPYLDRLVTRSLDRLEIDRALHVVLCEGSGFVLGDGMLFRLDEDEYRLVTEET 164 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID------------ 117 L+D +++R IE + +S + + +D Sbjct: 165 HLAWLLDSAAGFRVR----IEDVSASLAAISLQGPLAAAILAEAGVVDIADILPSASRWT 220 Query: 118 ---------ERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------------RINH 151 R L + W + + E R+ Sbjct: 221 EIAGMPAYLSRTGANGDLGYEIWIDPDDAPHAWRHLLEHSAARGLVPAGFALRELARLEA 280 Query: 152 GIVDPNTDFLPSTIFPHDAL----MDLL--NGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G D+L + A DL I K + G+E + R+ ++R + Sbjct: 281 GFPRAGKDYLSAFAAIDSADARTPFDLWPEPLIDFEKPLFNGREALRRL-VLVESQRRLV 339 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + P + I + ++GT + ALA + A AL + V+ Sbjct: 340 PLVVDGLEPVRFAAIHANARQVGTATSIGFSPALA----ANIALATIDVAALAAPDLTVR 395 Query: 266 AS 267 A Sbjct: 396 AE 397 >gi|318607042|emb|CBY28540.1| aminomethyltransferase (glycine cleavage system T protein) [Yersinia enterocolitica subsp. palearctica Y11] Length = 365 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 52/127 (40%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTRDFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ ++ ++ + V + ++ +V ++ + A Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169 Query: 126 LLHRTWG 132 + +G Sbjct: 170 GMKPFFG 176 >gi|332160491|ref|YP_004297068.1| glycine cleavage system aminomethyltransferase T [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664721|gb|ADZ41365.1| glycine cleavage system aminomethyltransferase T [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863926|emb|CBX74014.1| aminomethyltransferase [Yersinia enterocolitica W22703] Length = 365 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 52/127 (40%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTRDFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ ++ ++ + V + ++ +V ++ + A Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169 Query: 126 LLHRTWG 132 + +G Sbjct: 170 GMKPFFG 176 >gi|168003343|ref|XP_001754372.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694474|gb|EDQ80822.1| predicted protein [Physcomitrella patens subsp. patens] Length = 375 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 83/283 (29%), Gaps = 60/283 (21%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G AI FL+ ++ AD+ L S G ++ +I+K+ Sbjct: 41 SLFDVSHMCGLSLKGPDAIDFLETLVVADIKGLAPGTGTLSVFTNENGGVIDDTVITKVS 100 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118 +D L ++ R + L + ++ G + W+ S + Sbjct: 101 DDHIYLVVNAGCRKKDLAHLKKH-------LKPFQDTGKSVGWHIHDERSLLALQGPLAA 153 Query: 119 ----------------------RFSIADVLLHRTWGHNEK----IASDIKTYHE------ 146 + ++ L RT E D Sbjct: 154 DILQTLTKEDLSKMYFSDFKVIDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMD 213 Query: 147 ----------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQE 189 LR+ G+ D I P +A + G +G ++G E Sbjct: 214 KGQGKIRLTGLGARDSLRLEAGLCLYGNDLE-QHISPIEAGLAWTVGKRRRAEGNFLGAE 272 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + R + ++R I+ + + IG + Sbjct: 273 TILRQIKDGVSKRRVGFISTGAPARAHSEILDLEGNNIGEITS 315 >gi|167753016|ref|ZP_02425143.1| hypothetical protein ALIPUT_01280 [Alistipes putredinis DSM 17216] gi|167659330|gb|EDS03460.1| hypothetical protein ALIPUT_01280 [Alistipes putredinis DSM 17216] Length = 369 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G A FLQ I T DV L + + + +G I+ L+ +I+ +T++ Sbjct: 49 SHMGEVWVKGPKAEAFLQHITTNDVAALYDGKVQYTTMPNGKGGIVDDLLVYRIDAETYL 108 Query: 67 LEIDRSKRD 75 L I+ + D Sbjct: 109 LVINAANID 117 >gi|328676568|gb|AEB27438.1| Aminomethyltransferase (glycine cleavage system T protein) [Francisella cf. novicida Fx1] Length = 358 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVTITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDISTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|326402221|ref|YP_004282302.1| aminomethyltransferase [Acidiphilium multivorum AIU301] gi|325049082|dbj|BAJ79420.1| aminomethyltransferase [Acidiphilium multivorum AIU301] Length = 366 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 94/298 (31%), Gaps = 49/298 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L+ ++T D+ L R + ++ QG I+ +++ + D +L ++ + Sbjct: 61 LEGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVANLG-DRLLLVLNAGR 119 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----RF--------- 120 ++ + + + L + V + Q ++ E +S E RF Sbjct: 120 KNVDVAHIRAH-LPATVSLTPQFDRALLALQGPEAGAVLASLAPEVAAMRFMEAREMALS 178 Query: 121 -----------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 + A+ L + + LR+ G+ Sbjct: 179 GISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSLRLEAGLPLYG 238 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215 D T P A + G + G ++G + V R H R+R + + P Sbjct: 239 NDI-DETRDPIAAGLGFAIGKTRKMGWDFLGGDAV-RAVHDAGPRERLVGLRAEGRAPVR 296 Query: 216 SGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G+ + G + V G AL R D L + + Sbjct: 297 AGAELRDAAGQPAGRVTSGTFGPSVNGPVALGYVRADCAGDDSTLIAGLRGRDIGITV 354 >gi|229593242|ref|YP_002875361.1| glycine cleavage system aminomethyltransferase T [Pseudomonas fluorescens SBW25] gi|229365108|emb|CAY53328.1| aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas fluorescens SBW25] Length = 360 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A SA+L +G ++ ++ + E + Sbjct: 50 SHMTVIDVTGPQAKEWLQRLLANDVERLHGCGRALYSAMLNEKGGVVDDMIVYRTEA-AY 108 Query: 66 ILEIDRSKRD 75 L ++ + RD Sbjct: 109 RLVVNAATRD 118 >gi|254502791|ref|ZP_05114942.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222438862|gb|EEE45541.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 825 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 88/308 (28%), Gaps = 60/308 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A +L ++ + + +L +G+I L + ++ D F L Sbjct: 501 IEVSGPEAETYLDRLVANKLPK-KVGGITLTHMLNRRGRIELELTVVRLGPDRFYLVCAA 559 Query: 72 SKRDSLIDKLLFY------------------KL---RSNVIIEI---QPINGVVLSW--N 105 L+D L + L R+ ++ ++ W Sbjct: 560 FFEQRLLDHLAQHLGGETVTVRNLSTDWGAMALNGPRARDVLAPNTSAALDNASFRWLTA 619 Query: 106 QEHTFSNSSFIDERFSIADVLLH--------------RTWGHNEKIASDIKTY-----HE 146 QE + R S A L W E + + Y + Sbjct: 620 QEIEVAGRKLWAFRMSYAGELGWEFHVPWEDMLAVYDALWATGESLG--LMDYGSFAMNA 677 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G + P +M + L KG ++G+E ++ + + Sbjct: 678 LRLEKGF-KGAGELTNEVTLPEANVMRF---VKLDKGDFLGREETAKSAESALPWVCVYL 733 Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMALT 258 D + G +L D +G + A A + + + + + Sbjct: 734 EVEPDGVADGHGGEAVLMDGKVVGATSSIAYGHSVGKILAFAYVKPEAAKAGTELEVVVM 793 Query: 259 VHGVRVKA 266 + Sbjct: 794 NGARAARV 801 >gi|183599849|ref|ZP_02961342.1| hypothetical protein PROSTU_03366 [Providencia stuartii ATCC 25827] gi|188022121|gb|EDU60161.1| hypothetical protein PROSTU_03366 [Providencia stuartii ATCC 25827] Length = 364 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 104/309 (33%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ + +D + Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDIAKLTDKGKALYTGMLNASGGVIDDLIVYYLNDDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ + RD I + + V IE++ ++ S + Sbjct: 110 RLVVNSATRDKDIAWIEQHMKSYPVSIEVRDDLALLAVQGPTAQQKVHSLLTPSQCALLA 169 Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTYHE----------------LRI 149 + + + A ++ +H+ LR+ Sbjct: 170 DMKPFYGVQADELFIATTGYTGEKGYEIALPKAQVVEFWHQLLKAGVHPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D TI P A M +IG+E + +++ + + +++ Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALEKLKEQGTEKLVGIVMRE 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 L + TDD +G L V +A+AR+ K + K + + Sbjct: 289 KGILRAGQTVRFTDD--LGKLQEGVITSGSFSPTLGFSIALARVPK-EIQDKAIVEIRNR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EMPVEVVKP 354 >gi|307943574|ref|ZP_07658918.1| aminomethyl transferase family protein [Roseibium sp. TrichSKD4] gi|307773204|gb|EFO32421.1| aminomethyl transferase family protein [Roseibium sp. TrichSKD4] Length = 377 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 96/305 (31%), Gaps = 60/305 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A Q + D+ L + ++ G +L + K+ ED + + I Sbjct: 70 VELVGPDAGRLAQMLTPRDLSNLTVGRCFYTPMVDETGGMLNDPVALKLAEDRYWVSIAD 129 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------R 119 S I L Y LR V ++ ++ + + + F D+ + Sbjct: 130 SDLLYWIKGLA-YALRLEVDVDEPDVSPLAIQGPKAEDLVARVFGDQIRSIGFFRYEYVQ 188 Query: 120 FSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINHGI 153 F ++L R+ + + RI G+ Sbjct: 189 FQGQHMVLARSGYSKQGGFEFYVDGSHNGEPLWDAFMKAGEDLNVRAGCPNLIERIESGL 248 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + D + PH+ + GC +G++ + R+ +R+ + D + Sbjct: 249 LSYGNDMTRNNT-PHECGLGKFCQTQKAIGC-VGRDALLRVAVEGPVRQIRHLAIDGDPV 306 Query: 214 PPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 PP PI ++G + A+ + R+ D+ G RV+ Sbjct: 307 PPCKDLWPIFAGGKKVGNVSSAAWSPDFRTNVAIGMVRMTHWDN-----------GTRVE 355 Query: 266 ASFPH 270 P Sbjct: 356 VETPD 360 >gi|123965544|ref|YP_001010625.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus str. MIT 9515] gi|123199910|gb|ABM71518.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus str. MIT 9515] Length = 282 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 31/255 (12%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK + FL IT + + L+P G IL L E+ + + Sbjct: 20 SITGKDSKRFLNG-ITTGNIVNLNNNVLQTCWLSPNG-ILKSLLEINCLENKLDVIVFVG 77 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------QEHTFSNSSFIDERFSIADVL 126 + I I P + V+LS Q NS + + + Sbjct: 78 NTSEIRKYFN--------EI-IFPSDDVLLSDTFSINRLQHVDDINSWRVTQPIFFHNKD 128 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 + +N + +IN I +++ P + + L + KGCY+ Sbjct: 129 KEYAFYNNNPNLMNTNDLQSWKINQAIPSLDSEI-NGKNNPLELGLADL--VDFNKGCYL 185 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP---ILTD---DIEIGTLGVVVGK---- 236 GQE +S+I++ + +++ + T D + S I + + +G + + Sbjct: 186 GQETMSKIRNVSSLKQEIRVWTAKDRVINIESDSKKIYNNQNKEKTVGYITSIYKSDSLT 245 Query: 237 -KALAIARIDKVDHA 250 K LA+ + +D Sbjct: 246 TKGLALIKRKYLDKE 260 >gi|228906473|ref|YP_932791.2| glycine cleavage system aminomethyltransferase T [Azoarcus sp. BH72] Length = 363 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A +L+ ++ DV L A + +L P G ++ ++ ++ ++ + Sbjct: 53 SHMLALDLTGPDATAWLRRLLANDVAKLRTAGKALYACMLNPTGGVIDDLIVYRLSDNQY 112 Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER 119 + ++ D + + + +NV + + + + + S +F + R Sbjct: 113 RIVVNAGTADKDVQWMRRQIGEMPANVTLTPRRDLAMIAVQGPHAREASWKAFPELR 169 >gi|300789375|ref|YP_003769666.1| sarcosine oxidase subunit alpha [Amycolatopsis mediterranei U32] gi|299798889|gb|ADJ49264.1| sarcosine oxidase subunit alpha [Amycolatopsis mediterranei U32] Length = 845 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 102/320 (31%), Gaps = 62/320 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + G ++ + ++ E+ F+ Sbjct: 515 STLGKIDVQGPDAGWFLDMLYTNMMSTLKVGRIRYGVMCGVDGMVIDDGTVIRVGEERFL 574 Query: 67 LEIDRSKRDSLID-----------KLLFYKL--------------RSN-VIIEIQPINGV 100 + +++ L + RS V+ + P V Sbjct: 575 VTTTTGNAAKILEWMEEWLQTEWPHLRVFATSVTEHWATIPLVGPRSREVLGRLAPDLDV 634 Query: 101 ------VLSWNQEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIASDI 141 ++W ++ + R S + L L ++ Sbjct: 635 SNDAFGFMTWQDAEVAGLAARV-CRISFSGELAYEINVPSWHGPALWQSIVDQGATPYGT 693 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 +T H LR G D T+ P D + +S K +IG+ +R ++ R Sbjct: 694 ETMHVLRAEKGYPIIGQD-TDGTVTPQDLGLSW--AVSKKKADFIGKRSFARAENNRPDR 750 Query: 202 KRPMIITGTDD--LPPSGSPILTDD-------IEIGTLGVVVGKKAL----AIARIDKVD 248 K+ + + D L P GS I+ + +G + AL A+A + Sbjct: 751 KQFVGLLPVDPSVLLPEGSQIIESEVVPEPPVRMLGHVTSSYDSAALGRTFALALVRSGR 810 Query: 249 HAIKKGMALTVHGVRVKASF 268 I + + + V V + Sbjct: 811 ERIGETLYVPVGDQVVPVTV 830 >gi|119669991|emb|CAL93904.1| glycine cleavage system T protein [Azoarcus sp. BH72] Length = 335 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A +L+ ++ DV L A + +L P G ++ ++ ++ ++ + Sbjct: 25 SHMLALDLTGPDATAWLRRLLANDVAKLRTAGKALYACMLNPTGGVIDDLIVYRLSDNQY 84 Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER 119 + ++ D + + + +NV + + + + + S +F + R Sbjct: 85 RIVVNAGTADKDVQWMRRQIGEMPANVTLTPRRDLAMIAVQGPHAREASWKAFPELR 141 >gi|309361917|emb|CAP29233.2| hypothetical protein CBG_09336 [Caenorhabditis briggsae AF16] Length = 403 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 60/313 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK + F++++ TADV L S +G I +I K ++D L + Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAG 140 Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------H 108 D + L R+ V IE G+V E Sbjct: 141 CIDKDLPYLLENAAAWRAKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMK 200 Query: 109 TFSNSSF---------------------IDERFSIADVLLHRTWGHNEKIA--SDIKTYH 145 T S F +D + A+ L+ R + + Sbjct: 201 TTVGSVFGIDGCRVTRCGYTGEDGVEISVDP--TKAEQLVDRLLASQAGKVKLAGLGARD 258 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKR 203 LR+ G+ +D +T P +A + + + + G E +V +++ ++ ++R Sbjct: 259 ALRLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRR 317 Query: 204 PMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 ++ P S P++ D IG + A+A K + Sbjct: 318 VGLLAQPGRCPRSHLPLIDPLDKCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIV 377 Query: 256 ALTVHGVRVKASF 268 V+ Sbjct: 378 DFGAKQAPVEVVK 390 >gi|300722106|ref|YP_003711388.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Xenorhabdus nematophila ATCC 19061] gi|297628605|emb|CBJ89179.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Xenorhabdus nematophila ATCC 19061] Length = 365 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 97/309 (31%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ D+ L A + +L G ++ ++ ++ + Sbjct: 50 SHMTIVDLHGSGCRDFLRYLLANDIAKLTEQGKALYTGMLNASGCVIDDLIVYFFTDNFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER----- 119 + ++ + R+ + L + ++ +V I ++ ++ + S DE+ Sbjct: 110 RMVVNSATREKDLAWLEQHAVKYDVEITVRDDLALIAVQGPNAQSKVQSLLSDEQKHAVA 169 Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + LR+ Sbjct: 170 GMKPFFGVQSGDLFLATTGYTGEAGYEIALPKEQAEDFWQQLLVAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + T+ P A M +IG+E + R + ++ + + Sbjct: 230 EAGMNLYGQEM-DETLSPLAANMGWTIAWKPEDRQFIGREALERQRETGT--EQLVGLVM 286 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + G I++ + G + V +A+AR+ + + + Sbjct: 287 REKGVLRGGLIVSFTDDSGEVRSGVITSGTFSPTLGFSIALARV-PQGIGEQAIVQIRNR 345 Query: 261 GVRVKASFP 269 + VK P Sbjct: 346 EMPVKVVKP 354 >gi|304392636|ref|ZP_07374576.1| sarcosine dehydrogenase [Ahrensia sp. R2A130] gi|303295266|gb|EFL89626.1| sarcosine dehydrogenase [Ahrensia sp. R2A130] Length = 831 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 90/310 (29%), Gaps = 64/310 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G+ A FL + DV +P + L +G I ++++ E + Sbjct: 506 MSSFGKIRVIGRDAEKFLNRVCGNDVA-VPTGKIVYTQFLNERGGIEADVTVTRLSEQEY 564 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 I+ + + + + V I ++ GV+ Sbjct: 565 IVVTPAATVPRELSWMRRHLEDEAVAIVDMTAAEGVLAVMGPNARTLLEKVSHHDWSNDN 624 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144 E + R + L + + A +T Sbjct: 625 HPFGQAHEIELGMGTARAHRVTYVGELGWELYMPTDMCAHAFETLMNAGADMDLKLCGMH 684 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LRI G D +A + + K +IG++ V + + + + Sbjct: 685 MMDSLRIEKGYRHFGHDITEEDHV-VEAGLGF--AVKTAKENFIGRDAVLKKREQG-LEM 740 Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 R D LP PI+ D + + ++ G A+ + Sbjct: 741 RMTQFKLKDPLPLLYHNEPIIRDGEIVSYVTS--------------ANYGHTVGGAIGMG 786 Query: 261 GVRVKASFPH 270 V K+ P Sbjct: 787 YVPCKSEKPD 796 >gi|238752287|ref|ZP_04613766.1| Aminomethyltransferase [Yersinia rohdei ATCC 43380] gi|238709448|gb|EEQ01687.1| Aminomethyltransferase [Yersinia rohdei ATCC 43380] Length = 365 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 50/127 (39%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + RD ++ + + V + ++ +V ++ + A Sbjct: 110 RLVVNSATRDKDLEWITQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169 Query: 126 LLHRTWG 132 + +G Sbjct: 170 GMKPFFG 176 >gi|120403281|ref|YP_953110.1| FAD dependent oxidoreductase [Mycobacterium vanbaalenii PYR-1] gi|119956099|gb|ABM13104.1| FAD dependent oxidoreductase [Mycobacterium vanbaalenii PYR-1] Length = 823 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 70/291 (24%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A LQ + TADV + + + +L +G +++ +D +++ + Sbjct: 498 LVGGDAEAALQWLCTADV-GVEVGRSVYTGMLNARGTYESDVTVTRTGQDEYLIVSSAAT 556 Query: 74 RDSLIDKLLFYKLRSNVI-----------IEIQPINGV----------VLSWNQEHTFSN 112 + D + RS + +++ V VLS + S+ Sbjct: 557 TERDKDHI-----RSQIRRRWPDGANAHLVDVTSAYAVFGVMGPRSREVLSALTDADLSD 611 Query: 113 SSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP- 156 ++F R + L + E + HG+ Sbjct: 612 AAFPFGTSRQISLGYATVRATRITYVGELGWELYVPAEFAVGVYEDLLAAGQRHGVARGG 671 Query: 157 ----------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + PS P +A + + ++G++ V R + Sbjct: 672 YYAIESLRLEKGYRAFGRELTPSE-NPVEAGLLFACKLKTDIA-FLGRDAVERARTEG-P 728 Query: 201 RKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIAR 243 R+R + + + G IL D G + LA R Sbjct: 729 RRRLVSFRVDSPEPMLWGGELILRDGAVAGQATSAAWGQTVGAAVGLAYLR 779 >gi|268557774|ref|XP_002636877.1| Hypothetical protein CBG09336 [Caenorhabditis briggsae] Length = 402 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 60/313 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK + F++++ TADV L S +G I +I K ++D L + Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAG 140 Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------H 108 D + L R+ V IE G+V E Sbjct: 141 CIDKDLPYLLENAAAWRAKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMK 200 Query: 109 TFSNSSF---------------------IDERFSIADVLLHRTWGHNEKIA--SDIKTYH 145 T S F +D + A+ L+ R + + Sbjct: 201 TTVGSVFGIDGCRVTRCGYTGEDGVEISVDP--TKAEQLVDRLLASQAGKVKLAGLGARD 258 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKR 203 LR+ G+ +D +T P +A + + + + G E +V +++ ++ ++R Sbjct: 259 ALRLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRR 317 Query: 204 PMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 ++ P S P++ D IG + A+A K + Sbjct: 318 VGLLAQPGRCPRSHLPLIDPLDKCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIV 377 Query: 256 ALTVHGVRVKASF 268 V+ Sbjct: 378 DFGAKQAPVEVVK 390 >gi|238786185|ref|ZP_04630135.1| Aminomethyltransferase [Yersinia bercovieri ATCC 43970] gi|238712902|gb|EEQ04964.1| Aminomethyltransferase [Yersinia bercovieri ATCC 43970] Length = 365 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTLPGKALYSGMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V I ++ +V Sbjct: 110 RLVVNSATRDKDLAWITQHAEPYQVEITVRDDLALVAVQGPTA 152 >gi|86136952|ref|ZP_01055530.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. MED193] gi|85826276|gb|EAQ46473.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. MED193] Length = 816 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ ++V G A FL I A++ ++P + L P+G I ++++ E + Sbjct: 491 MSSFGKLRVEGPDAEAFLNYICGANL-SVPVGKIVYTQFLNPRGGIEADVTVTRMSETAY 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 ++ R + ++ + V+I ++ GV+ Sbjct: 550 LVVTPAITRLADQTWMMRHVGDFRVVITDVTAGEGVLAVMGPNARKLLEKVSPNDFSNDV 609 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 QE R + L + ++ +T HE Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYMSSDMAGHAFETLHEAGQDMGLKLCGMH 669 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIR 201 RI G D DA + + K +IG++ V +R + +R Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDHV-IDAGLGF--AVKTDKPDFIGRDAVLARKESGPKMR 726 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIKK 253 +T + L P++ D +G + A+ + + +K + Sbjct: 727 MMQFKLTDPEPLLYHNEPLIRDGEIVGYISSGNYGHTLGAAIGMGYVPCEGEKATDVLGS 786 Query: 254 GMALTVHGVRVKAS 267 + V G RV+A Sbjct: 787 SYEIEVMGARVQAE 800 >gi|167036241|ref|YP_001671472.1| glycine cleavage system aminomethyltransferase T [Pseudomonas putida GB-1] gi|166862729|gb|ABZ01137.1| glycine cleavage system T protein [Pseudomonas putida GB-1] Length = 360 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 6/137 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L QG ++ L+ ++ E+ + Sbjct: 50 SHMTVIDVDGTDATAWLQRLLANDVARLDDVGKALYSPLLHEQGGVIDDLLVYRM-ENGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + R ++D L + V + +P ++ ++ + A Sbjct: 109 RLVTNAATRAKVLDWLEQQRAGFAVNFQPRPDLAILAIQGPHAREKVAALLSP----ARA 164 Query: 126 LLHRTWGHNEKIASDIK 142 L R E +A Sbjct: 165 ALIRELRPFEGVAEGDW 181 >gi|160940405|ref|ZP_02087750.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC BAA-613] gi|158436985|gb|EDP14752.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC BAA-613] Length = 362 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 56/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A+ + ++T D + AR S + G ++ ++ KI+++++ Sbjct: 51 SHMGEILLSGPDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNSYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121 + ++ S +D + + + +V + +I G + + D Sbjct: 111 IVVNASNKDKDYQWMKDH-VSGDVELKDISGQVGQLALQGPKALDVLKKVADPDAIPDKY 169 Query: 122 ------------------------------IADVLLHRTW-------GHNEKIASDIKTY 144 +A R W I + Sbjct: 170 YTFKKDCCIDGIPCIISKTGYTGEDGVEIYMAGNDAPRLWELLLEAGREEGLIPCGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKR 203 LR+ + + TI P +A + + + + K +IG++ +Q + + RKR Sbjct: 230 DTLRLEASMPLYGHEM-DDTITPKEAGLGIF--VKMDKEDFIGKKA---LQEKGPLTRKR 283 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALT 258 + + P+ + +IGT +G A A+A +D + + Sbjct: 284 VGLKVTGRGIIREHEPVFAGEQQIGTTTSGTHCPYLGYPA-AMALVDIAYKEPGTQVEVD 342 Query: 259 VHGVRVKASF 268 V G RV A Sbjct: 343 VRGRRVGAEV 352 >gi|145250567|ref|XP_001396797.1| NAD dehydrogenase [Aspergillus niger CBS 513.88] gi|134082318|emb|CAL00413.1| unnamed protein product [Aspergillus niger] Length = 852 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 92/280 (32%), Gaps = 55/280 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ ++V G A LQ + T+D+ P + +L QGKI ++++E D F Sbjct: 509 LTSFHRVQVSGPGAATLLQRLTTSDITA-PPGAITHTLLLNRQGKIRSDIFVARLEPDLF 567 Query: 66 IL------EIDRSKRDSLIDK-------------------LLFYKLRSNVIIE-IQPING 99 + ++ ++ + + + RS +I + + Sbjct: 568 QIGANTATDVAYLAVEARRQRQHTPAQWVQVSDITGSTCCIGLWGPRSRAVIRAVSNDDF 627 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLH----------RTWGH-------NEKIA 138 + + T + R S L R W + IA Sbjct: 628 STTALPYMSVKRATIAGIPITALRKSYVGELGWEVQTSAEYGSRLWDALWQAGKPHGLIA 687 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQ-EVVSRIQH 196 + + LR+ GI D P +A + + + L K Y+G+ + S Q Sbjct: 688 AGRSAMNALRLEKGIRTYGVDMTTEHD-PLEAG--VFHLVDLDKKEEYVGKAALQSAAQR 744 Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVV 234 + +R +T D + P+ +G + V Sbjct: 745 KQPPLRRLRCLTIDDGHSMVMGKEPVYFGGKPVGYVTTAV 784 >gi|119716817|ref|YP_923782.1| FAD dependent oxidoreductase [Nocardioides sp. JS614] gi|119537478|gb|ABL82095.1| FAD dependent oxidoreductase [Nocardioides sp. JS614] Length = 826 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 53/280 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ LQ + ADV +P + L +G +++ + F+L + Sbjct: 519 VAGPGALAGLQWVCAADVD-VPVGRCVYTPFLNERGTYEADLTVTRTGPEEFLLVSSSAT 577 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGV---------VLSWNQEHTFSNSSFIDER-FSIA 123 +D L + + + + E + GV + + +F R ++ Sbjct: 578 TVRDLDWLARHGVPAEDVTERYAVLGVMGPRARSLLAACSPDDWSEEGFAFATSREVTVG 637 Query: 124 DVLLHRT---------WGHNEKIASDIKTYHE----------------LRINHGIVDPNT 158 VLL T W +A + Y LR+ G Sbjct: 638 GVLLRATRMTYVGELGWELTIPVADAVTVYDAVRAGGAVDAGYYAIESLRLEKGYRAFGR 697 Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-----NIIRKRP--MIITGTD 211 + P + P +A + G++ G ++G+ + +HR R+R +++ + Sbjct: 698 ELTPD-LGPVEAGLVFATGLAGD-GDFLGR--TALREHRAALADGGPRRRVVSLVLESLE 753 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARID 245 + G +L D G + + LA+ R D Sbjct: 754 PMLWGGELLLRDGDPAGQVTSAAWGETVGSCVGLALLRAD 793 >gi|300115118|ref|YP_003761693.1| glycine cleavage system T protein [Nitrosococcus watsonii C-113] gi|299541055|gb|ADJ29372.1| glycine cleavage system T protein [Nitrosococcus watsonii C-113] Length = 371 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 97/308 (31%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ PFL+ ++ +V L A S +L QG ++ ++ + E F Sbjct: 50 SHMTVVDLKGEKVRPFLRQLLANNVDRLSDPGTALYSCMLNEQGGVIDDLIVYLMAEQEF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106 L + RD ++ + + V +E +P ++ Sbjct: 110 RLISNAGTRDKVLSWVESHAAPFKVQVEERPELAMIAVQGPKARAQVHGQLSESLKEKVA 169 Query: 107 -----EHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148 + T+ F+ R R + LR Sbjct: 170 NLKRFQATWEEGLFV-ARTGYTGEDGYELLLSGPQAQDWWRRLQAGGAKPCGLGARDTLR 228 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ D P +A + + +IG+ V+ Q ++ ++ Sbjct: 229 LEAGMCLYGADM-DEATTPLEAGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLL 287 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGV 262 L +G I T+ +G V G +++A+AR+ V + + V Sbjct: 288 QGKGLMRNGQAITTN---LGEGVVTSGGFSPTLERSIALARV-PVGADSSCEVQIRGRAV 343 Query: 263 RVKASFPH 270 P Sbjct: 344 PAAMVKPP 351 >gi|254465220|ref|ZP_05078631.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium Y4I] gi|206686128|gb|EDZ46610.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium Y4I] Length = 816 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 97/319 (30%), Gaps = 66/319 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G A FL I A+V ++P + L P+G I ++++ E + Sbjct: 491 MSSFGKIRVEGPDAEKFLNYICGANV-SVPAGKIVYTQFLNPRGGIEADVTVTRLSETAY 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVL------------------ 102 ++ R + + +R+ V+ ++ GV+ Sbjct: 550 LVVTPAVTRLADQTWM----MRNKGGFNVVLTDVTAGEGVLAVMGPNARKLLQRVSPNDF 605 Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE-------- 146 QE R + L + E +T + Sbjct: 606 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYIPAEMSGHAFETLWEAGQDMGLKL 665 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI G D DA + ++ K +IG+ V + Sbjct: 666 CGMHMMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVATGKDDFIGKAAVLERKETG 722 Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVD 248 + R + TD P PI+ D +G L A+ + + + Sbjct: 723 -PKARMVQFKLTDPEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAA 781 Query: 249 HAIKKGMALTVHGVRVKAS 267 + + V GV+VKA Sbjct: 782 DVLGSTYEIDVCGVKVKAE 800 >gi|33241300|ref|NP_876242.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|59797846|sp|Q7V9I2|GCST_PROMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33238830|gb|AAQ00895.1| Glycine cleavage system T protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 373 Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 92/297 (30%), Gaps = 63/297 (21%) Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58 S+ + GK A LQ ++ +D+ + A + +L G I+ ++ Sbjct: 51 SHMGVFSIQGKNPKDA---LQTLVPSDLHRIGPGEACYTVLLNNDGGIIDDLIVYDLGTN 107 Query: 59 -KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------F 110 E+ ++ I+ + ID + + N+ + +GV+L+ + Sbjct: 108 DPNNEECILIVINAGCTQADIDWIKEHLSDKNLKVCNAKGDGVLLALQGPDSTNQLRNVL 167 Query: 111 SNSSFIDERF------------------------------------SIADVLLHRTWGHN 134 S +F + A L R N Sbjct: 168 GESLTNIPKFGHREIQVQLKTHPVSFSIFIARTGYTGEDGYEILLNTNAGKSLWRELIEN 227 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + LR+ G+ D +T P +A + L + T +IG+ + + Sbjct: 228 GVTPCGLGARDTLRLEAGMPLYGNDI-NNTTTPFEAGLGWLVHLE-TPDEFIGKAALVKQ 285 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID 245 + I +K + + G I+ + +G + ALA ID Sbjct: 286 TNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPID 342 >gi|302525061|ref|ZP_07277403.1| glycine cleavage system T protein [Streptomyces sp. AA4] gi|302433956|gb|EFL05772.1| glycine cleavage system T protein [Streptomyces sp. AA4] Length = 375 Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 108/306 (35%), Gaps = 61/306 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ + I V G A L A++ + + AR + I G +L ++ ++ ++ Sbjct: 61 LSHMAEIHVRGPQAADVLDYALVGN-LTGVKPGRARYTMICDADGGVLDDLVVYRLADEE 119 Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + D+L +++ + + +++ + + +++ + + + Sbjct: 120 YLVVANAGNATVVADALAERVAGF----DAVVDNRSADTALIAVQGPKAVDVLAAVTDAD 175 Query: 121 SIA--------------DVLLHRTWGHNE-------KIASDIKTY--------------- 144 A +VLL RT E A + Sbjct: 176 LAALKYYASMPAVVKGHEVLLARTGYTGEDGFELFVPAAEAPALWALLTEAGQEHGLVPC 235 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRN 198 LR+ G+ + + P A + + + K G ++G+ + ++ + Sbjct: 236 GLACRDTLRLEAGMPLYGNELSRE-LNPFAAGLGRV--VKFEKPGDFVGRAALEELKKAD 292 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254 + R R + P G +L+ D IG + L A+A +D+ + G Sbjct: 293 VPRVRVGLRGTGRRAPRHGYAVLSGDATIGEITSGALSPTLGYPIAMAYVDR--EHAEPG 350 Query: 255 MALTVH 260 AL+V Sbjct: 351 TALSVD 356 >gi|296394497|ref|YP_003659381.1| glycine cleavage system protein T [Segniliparus rotundus DSM 44985] gi|296181644|gb|ADG98550.1| glycine cleavage system T protein [Segniliparus rotundus DSM 44985] Length = 374 Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 58/304 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ ++ D+ + A+ + L P G ++ + + ++ Sbjct: 58 SHLGKALVAGPGAAEFVNRSLSNDLGRIRPGKAQYTLCLAPDGGVIDDLIAYYVSDEEIF 117 Query: 67 LEIDRSKRDSLIDKL--------------LFYKL------RSNVIIE----IQPINGVVL 102 L + + S++ L Y + RS +++ P + Sbjct: 118 LVPNAANTASVVAALEAVAPPEIRVTDQHRDYAVFAVQGPRSQEVLDGLGAAYPEEYMAY 177 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------------ 144 Q + ++ + R R + A + Sbjct: 178 VDAQVPVETGAATV--RICRTGYTGERGYELIPSWADAPAVFTAVLEQVKALGGEPAGLG 235 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G + I P + + K + G+E V + + RK Sbjct: 236 ARDTLRTEMGYALHGHELALD-ISPVQGGVGW--AVGWKKPEFFGREAVVAEKEQGPRRK 292 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + +P G P+ D IG + ALA+ HA+ G Sbjct: 293 LFGLKALESGVPRRGYPVRKGDEAIGEVTSGTFSPTLKTGVALALV---DAAHAVAVGDQ 349 Query: 257 LTVH 260 + + Sbjct: 350 VGID 353 >gi|239617994|ref|YP_002941316.1| glycine cleavage system T protein [Kosmotoga olearia TBF 19.5.1] gi|239506825|gb|ACR80312.1| glycine cleavage system T protein [Kosmotoga olearia TBF 19.5.1] Length = 368 Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 94/314 (29%), Gaps = 51/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +A+ F ++T V L + + G ++ L+ + ED + Sbjct: 52 SHMGEIEITGPNALIFADYLVTNSVSGLKNGEICYTPMCNENGGVVDDLLVYRFSEDKIL 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 ++ + D + + + R NV ++ L++ Sbjct: 112 FVVNAANTDKDFEWVKKHSARFNVEVKNISSETAQLAFQGPRAEEFLQEIAQVKLSEIPF 171 Query: 110 --FSNSSF--IDERFSIADVLLHRTWGHNEKIASDIKTY--------------------H 145 F+ ID S + + + Sbjct: 172 YHFTEGKVVGIDCIISRTGYTGEDGFELYTSPEGAVPLWRKILEIGAPYGVKPIGLGARD 231 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR + + I P +A + + L K +IG++ + + + K Sbjct: 232 TLRFEACYMLYGNEL-NDEITPLEAGLKWT--VKLDKD-FIGKDKLLKQLENGLEYKLRG 287 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259 I +P G + D +IG + + ALA + + + + Sbjct: 288 IELVEKGIPRHGYEVYADGEKIGWVSSGMLSPTLKKPVALAYLKKGYWKRGTEVEIKIRS 347 Query: 260 HGVRVKASFPHWYK 273 V+ + +Y+ Sbjct: 348 KMVKAVVTKTPFYR 361 >gi|258591473|emb|CBE67774.1| glycine cleavage system T-protein (aminomethyltransferase) [NC10 bacterium 'Dutch sediment'] Length = 370 Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 91/312 (29%), Gaps = 47/312 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A+ +Q + D L + SA+ TP+G + + K +D + Sbjct: 56 SHMGEIEITGPGALDAIQRLTPNDASRLSVGEVQYSALTTPEGTFVDDITVYKFADDRYG 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ + + + + + S V + + +L+ Sbjct: 116 VTVNAANIEKDYAWIREH-VPSGVEVRNASDDRALLAIQGPRAQEILGKLTSVELGTLRY 174 Query: 110 ----FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPS 163 + ID S + + ++ L + G Sbjct: 175 FRFVEGQAIGIDCCISRTGYTGEDGFEVYIPPQHTVTLWNAL-LEAGTPVGLQPCGLGAR 233 Query: 164 TIFPHDALMDLLNG----------------ISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 +A M L + L KG +IG+E ++R + I RK Sbjct: 234 DTLRLEAKMALYGQDIDDRHTVLEADLGWIVKLEKGEFIGREALARQKAAGISRKLVGFE 293 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV-----VVG-KKALAIARIDKVDHAIKKGMALTVHG 261 + I+ IG + +G L + + + + Sbjct: 294 MCGRGIARPHYAIVNGSQPIGEVTSGGPSPSLGKNIGLGYVAVQHAAIGTEFDIVIRGQP 353 Query: 262 VRVKASFPHWYK 273 V + +YK Sbjct: 354 VAARVVRTPFYK 365 >gi|114328488|ref|YP_745645.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] gi|114316662|gb|ABI62722.1| aminomethyltransferase family protein [Granulibacter bethesdensis CGDNIH1] Length = 632 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 92/289 (31%), Gaps = 63/289 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69 ++ G A L +T D+ L +A+ P G ++ + ++ + TF L Sbjct: 310 EITGPDAEKLLNYAVTRDISKLSIGQIVYTALCHPHGGMIDDATVFRMSQHTFRLICGRE 369 Query: 70 -----------------------DRSKRDSLIDKLLFYKLRSNV------IIEIQPINGV 100 D+ SL L L S V + + + Sbjct: 370 WCGTWLRMLASEKDFKVWVRSSTDQLHNISLQGPLSRIIL-STVFSPYLTQPDAKDLKWF 428 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKT 143 S S + R L + + H + + + Sbjct: 429 HFSTGMLGKHDPSPVMISRTGYTGELGYEIFCHPQHAGSVWDAVMEAGKNHALKPAGLDA 488 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202 + LRI G+ +F T P +A + + +S K Y+G+ + ++ + R Sbjct: 489 LNMLRIEAGLAFAGYEFCDQTD-PFEAGIGFV--VSQKKQSDYVGK--TALLERGSAYRN 543 Query: 203 RPMIITGTD-DLPPSGSPILTDDIEIGTLGV-----VVGKKALAIARID 245 R + D G + ++G + ++G + +A+ARID Sbjct: 544 RLAGLVIEGNDTVFHGDGVYNGMAQVGIITSPVFSPILGSQ-IALARID 591 >gi|187930552|ref|YP_001901039.1| glycine cleavage system aminomethyltransferase T [Ralstonia pickettii 12J] gi|238691849|sp|B2UG80|GCST_RALPJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|187727442|gb|ACD28607.1| glycine cleavage system T protein [Ralstonia pickettii 12J] Length = 375 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKL 81 L ++ + ++ + Sbjct: 111 RLVVNAGTAPTDLEWI 126 >gi|169629036|ref|YP_001702685.1| glycine cleavage system aminomethyltransferase T [Mycobacterium abscessus ATCC 19977] gi|169241003|emb|CAM62031.1| Probable aminomethyltransferase/Glycine cleavage system T protein [Mycobacterium abscessus] Length = 364 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 98/312 (31%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A T D+ + A+ + T G ++ + + +D Sbjct: 52 SHLGKALVRGPGAAAFVNACFTNDLNKVGPGKAQYTLCCTETGGVIDDLIAYYVSDDEIF 111 Query: 67 LEIDRSKRDSLIDKLLF--------------YKL------RS------------------ 88 L + + +++ L Y + RS Sbjct: 112 LVPNAANTSAVVAALQEQAPEGIAVTNQHRDYAVLAVQGPRSADVLQRLGLPTDMEYMAY 171 Query: 89 -NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 + + P+ + EH + D+ ++ D LL ++A + L Sbjct: 172 ADATLAGLPVRVCRTGYTGEHGYELLPSWDDAGAVFDALLPVITEAGGQLAG-LGARDTL 230 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206 R G + I P A + K + G+E +++ + R R + Sbjct: 231 RTEMGYPLHGHELSLD-ISPVQARAGW--AVGWKKDAFWGREALTQEKTDGPRRTLRGLR 287 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH-- 260 TG L P + +L+D IG +A+A +D I G ++ V Sbjct: 288 ATGRGVLRPDLT-VLSDGQSIGVTTSGTFSPTLKTGIALALLDTAAQ-IPDGASVVVDVR 345 Query: 261 --GVRVKASFPH 270 + + P Sbjct: 346 GREIECEVVKPP 357 >gi|241664739|ref|YP_002983099.1| glycine cleavage system aminomethyltransferase T [Ralstonia pickettii 12D] gi|240866766|gb|ACS64427.1| glycine cleavage system T protein [Ralstonia pickettii 12D] Length = 375 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKL 81 L ++ + ++ + Sbjct: 111 RLVVNAGTAPTDLEWI 126 >gi|85707207|ref|ZP_01038293.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. 217] gi|85668261|gb|EAQ23136.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. 217] Length = 1003 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 84/272 (30%), Gaps = 51/272 (18%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 +S + S I V G A FL + T + +L R + G ++ ++++I Sbjct: 664 LSLLDASTLGKIIVKGPDAGKFLDMLYTNVMSSLKPGKCRYGLMCNENGFLMDDGVVARI 723 Query: 61 EEDTFILEIDRSKRDSLIDKL-----------LFY----------------KLR---SNV 90 +EDTF+ +S+ + Y K R + + Sbjct: 724 DEDTFLCHTTTGGAESIHGHMEDWLQCEWWDWKVYTANVTEQYAQIAVVGPKARETLAKL 783 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD 140 + + + + T ++ R S + L W ++ Sbjct: 784 TTDDLSNDALPFMGWADLTLADMPVRAYRISFSGELSYEIAVPASHGRALWDALLDAGAE 843 Query: 141 -------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + H +R G + + T+ P D M IS K Y+G+ R Sbjct: 844 HGVTPYGTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLNMGW--AISKKKDDYLGKRAQER 900 Query: 194 IQHRNIIRKRPMII-TGTDDLPPSGSPILTDD 224 + R + + + T + P G+ Sbjct: 901 SHMADPNRWKLVGLETLDGSVLPDGAYATAPG 932 >gi|188587345|ref|YP_001918890.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229807551|sp|B2A2T4|GCST_NATTJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|179352032|gb|ACB86302.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 365 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 67/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ +LQ ++ DV L + + G + FLI K++E+ F+ Sbjct: 52 SHMGEIIVEGPKALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFL 111 Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84 L ++ + K + ++ +L F+ Sbjct: 112 LIVNAANTDKDFEWLQENNTEGVELKNLSDEYGQIAIQGPKAEKILQRLTDTPLKEIKFF 171 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD---- 140 + +V ++GV ++ + F I + W E + Sbjct: 172 NFKEDV-----DLDGVKALISRTGYTGENGF---EIYIKAEETAKLWEKIEDAGENDGLK 223 Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQH 196 + LR + + P I P +A ++ + L K ++G++V+ + Sbjct: 224 PIGLGARDVLRFEVCLPLYGNELSPE-ITPLEARLNPF--VKLNKTEDFLGKDVLVNQKE 280 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250 + + R +P + ++ D EIG + L + + Sbjct: 281 QGLERVLVGFEMIDRGIPRTNYILMKDGQEIGFVSSGSQSPTLDKALGLGFIKPEHDQEG 340 Query: 251 IKKGMALTVHGVRVKASFPHWYK 273 + + + + K +Y+ Sbjct: 341 NEIEVKIRKKTAKAKIVKTPFYR 363 >gi|309780452|ref|ZP_07675201.1| glycine cleavage system T protein [Ralstonia sp. 5_7_47FAA] gi|308920780|gb|EFP66428.1| glycine cleavage system T protein [Ralstonia sp. 5_7_47FAA] Length = 375 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110 Query: 66 ILEIDRSKRDSLIDKL 81 L ++ + ++ + Sbjct: 111 RLVVNAGTAPTDLEWI 126 >gi|148243536|ref|YP_001228693.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. RCC307] gi|166221575|sp|A5GWT1|GCST_SYNR3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|147851846|emb|CAK29340.1| Glycine cleavage system T protein [Synechococcus sp. RCC307] Length = 359 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 85/285 (29%), Gaps = 45/285 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G LQ ++ +D+ + A+ + +L G I ++ + + Sbjct: 49 SHMGVLTLTGSGVKDKLQGLVPSDLQRIGPGEAQYTVLLNEAGGIRDDLIVYDRSDTEVV 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-------SNSSFIDER 119 + I+ + DS + V + + GV+L+ S R Sbjct: 109 VVINAACADSDTAWIKQQLEPQGVSVSDRKAGGVLLALQGPEAVGRLERLCGESLAGVPR 168 Query: 120 F------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRI 149 F + A L R + + LR+ Sbjct: 169 FGHRDLTIKGEPVFAARTGYTGEDGFELLLTASAGQSLWRQLLEDGVAPCGLGARDSLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + D +T P + + L + + ++G+E + R + RK + Sbjct: 229 EAAMHLYGNDMDANTS-PLECGLGWLVHLEMPIE-FVGREALERQTAEGVSRKLVGLQLQ 286 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 + P+L + +G + ALA R D Sbjct: 287 GRAIARHDYPVLHNGEPVGVVTSGTFSPTLEHPVALASVRADLAK 331 >gi|148259070|ref|YP_001233197.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5] gi|146400751|gb|ABQ29278.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5] Length = 366 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 94/298 (31%), Gaps = 49/298 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L+ ++T D+ L R + ++ QG I+ +++ + D +L ++ + Sbjct: 61 LEGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVANLG-DRLLLVLNAGR 119 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----RF--------- 120 ++ + + + L + V + Q ++ E ++ E RF Sbjct: 120 KNVDVAHIRAH-LPATVSLTPQFDRALLALQGPEAGAVMATLAPEVAAMRFMEAREMALS 178 Query: 121 -----------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 + A+ L + + LR+ G+ Sbjct: 179 GISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSLRLEAGLPLYG 238 Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215 D T P A + G + G ++G + V R H R+R + + P Sbjct: 239 NDI-DETRDPIAAGLGFAIGKTRKMGWDFLGGDAV-RAVHDAGPRERLVGLRAEGRAPVR 296 Query: 216 SGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +G+ + G + V G AL R D L + + Sbjct: 297 AGAELRDAAGQPAGRVTSGTFGPSVNGPVALGYVRADCAGDGSTLIAGLRGRDIGITV 354 >gi|261250782|ref|ZP_05943356.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio orientalis CIP 102891] gi|260937655|gb|EEX93643.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio orientalis CIP 102891] Length = 372 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 111/310 (35%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL++++ D++ LP R + +G I+ +++ + +D Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPKGNQRYAFFTNEEGGIMDDLMVANL-DDHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDERF-- 120 + ++ + ++ I+ L + L S V +EI ++ + N+ D F Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLALQGPKAVDVLKRFNAQVADMVFMD 171 Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 S A+ L + E + LR+ Sbjct: 172 VKKLNILGVECIVSRSGYTGEDGYEISVPNSHAEELAQKLTSEKEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + I +G + G +++ + ++ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKIRRTGGEREGGFPGADIILKQLETKDVSRKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + DD +IG + ++A R D + + Sbjct: 292 LVGQTKAPVREGAELFDADDNKIGVVTSGTAGPNAGKPVSMAYVRADLAAIGTEVYADVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKKLAMTVEK 361 >gi|289678190|ref|ZP_06499080.1| glycine cleavage system T protein [Pseudomonas syringae pv. syringae FF5] Length = 226 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 50/120 (41%), Gaps = 1/120 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L ++ + +D + L + L + IE +L+ + + + + + Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173 >gi|291301849|ref|YP_003513127.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM 44728] gi|290571069|gb|ADD44034.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM 44728] Length = 369 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A F+ + ++ D+ + A+ + P G ++ + D Sbjct: 57 SHLGKVDITGPGAADFVNSCLSNDLGKISPGKAQYTLCCDPAGGVVDDMIAYLYGPDRVF 116 Query: 67 LE----------------------------------IDRSKRDSLIDKLLFYKLRSNVII 92 L + K ++ L S + Sbjct: 117 LVPNAANNAEVAARLAAAAPEGVTVTNQHTDYAVLAVQGPKSTEVLKALGLPTEHSYMSF 176 Query: 93 EIQPINGVVL-----SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 + + G + + EH + + D +L ++ + A + L Sbjct: 177 DEGHVGGATVIVCRTGYTGEHGYELVIPAAAAVAAWDEILTAGVAYDIRPAG-LGARDTL 235 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G + I P A + K + G+E ++ + R R + Sbjct: 236 RTEMGYPLHGHELSLD-ITPVQARAGW--AVGWKKDAFWGKEPLAAEKAAGPAR-RLWGL 291 Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH-- 260 T +P + +L+ + +G K +A+A +D + +G L V Sbjct: 292 EATGRGIPRADMNVLSGETVVGVTTSGTFSPTKKVGIALALLDTAAE-LAEGAELEVDVR 350 Query: 261 --GVRVKASFPH 270 + VK P Sbjct: 351 GRRLPVKVVKPP 362 >gi|225010727|ref|ZP_03701196.1| glycine cleavage system T protein [Flavobacteria bacterium MS024-3C] gi|225005098|gb|EEG43051.1| glycine cleavage system T protein [Flavobacteria bacterium MS024-3C] Length = 361 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 90/316 (28%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G +A LQ + + +V L A+ S G I+ ++ + + ++ Sbjct: 49 SHMGEFLVEGPNAFDLLQKVTSNEVANLKPGKAQYSCFPNETGGIVDDLIVYMLAPEKYL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L ++ S D + Y ++ +L+ Sbjct: 109 LVVNASNIDKDWAHINKYNESFKANLKNLSDAYSLLAIQGPKAVEAMQSLTSVSLADIPF 168 Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHE------------------ 146 F F I + G E K + + + Sbjct: 169 YHFEVGPFAGIEHVIISATGYTGSGGFEIYCKNEEAAQLWDKVFEAGASFGIKPVGLAAR 228 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G +D T P +A + + +K ++ ++ + + RK Sbjct: 229 DTLRLEMGYCLYGSDINDQTS-PLEAGLGWI--TKFSKD-FVNAASLATQKELGVQRKLV 284 Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +P PI+ D EIG + L +D + + + Sbjct: 285 AFALEDRGIPRHDYPIVDIDGNEIGMVTSGTMSPSLGIGIGLGYVTLDHSKLDSEIFIQI 344 Query: 258 TVHGVRVKASFPHWYK 273 + K +YK Sbjct: 345 RKKALAAKVVKLPFYK 360 >gi|212691827|ref|ZP_03299955.1| hypothetical protein BACDOR_01322 [Bacteroides dorei DSM 17855] gi|212665583|gb|EEB26155.1| hypothetical protein BACDOR_01322 [Bacteroides dorei DSM 17855] Length = 361 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 60/307 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGLNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99 + ++ KL V + P Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169 Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146 + ++ SN+ + + A + + + Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G D T P +A + + K +I + ++ + + + RK Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 +P G ++ D +IG + K + + + A+ + + V G Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347 Query: 262 VRVKASF 268 ++KA Sbjct: 348 RKLKAVI 354 >gi|254476339|ref|ZP_05089725.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp. R11] gi|214030582|gb|EEB71417.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp. R11] Length = 816 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 98/315 (31%), Gaps = 58/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G A FL I A+V ++P + +L +G I ++++ E + Sbjct: 491 MSSFGKIRVEGPDAEKFLNYICGANV-SVPAGKIVYTQLLNSRGGIEADVTVTRLSETVY 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 ++ R + ++ +K V+I ++ GV+ Sbjct: 550 LVVTPAVTRLADQTWMMRHKGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 609 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE------------ 146 QE R + L + + +T + Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLWEAGQDMGLKLCGMH 669 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D DA + ++ K +IG+ V + + Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-VDAGLGF--AVATGKDDFIGKAAVLERKETG-PKA 725 Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIK 252 R + TD P PI+ D +G L A+ + + + + Sbjct: 726 RMVQFKLTDPEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAADVLG 785 Query: 253 KGMALTVHGVRVKAS 267 + V GV+V+A Sbjct: 786 STYEIDVCGVKVQAE 800 >gi|254451139|ref|ZP_05064576.1| glycine cleavage T protein [Octadecabacter antarcticus 238] gi|198265545|gb|EDY89815.1| glycine cleavage T protein [Octadecabacter antarcticus 238] Length = 384 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 108/297 (36%), Gaps = 56/297 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69 +++ G A F Q + + D+ T + I G ++ ++ K+ ED F L I Sbjct: 70 VEIKGPDAAKFTQYLCSRDLSTCKIGQCKYVLITDQDGGVINDPIVLKLAEDHFWLSIAD 129 Query: 70 ----------------DRSKRDSLIDKLL------FYKLRS---NVIIEIQPINGVVLSW 104 D + + L LR+ + E++ + + W Sbjct: 130 TDVLLWARGLAVNAGMDVELSEPDVSPLQLQGPKSRDILRACFGDAPTELKYYHFMEYDW 189 Query: 105 NQ-----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIV 154 + T +S E F R W H I + T RI G++ Sbjct: 190 HGVPLIISRTGWSSELGYEIFLRDGSAGGRLWEHIMDIGVPMGLKPGHTSGIRRIEAGML 249 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + D + P + +D L + + ++G++ ++RI+ + +R+R + + + LP Sbjct: 250 SYHADLTLAN-NPFELNLDRLVNLDMEAD-FVGKDALARIKEKG-VRQRLVGLE-IEGLP 305 Query: 215 PSGS-----PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 G+ P++ D ++GT+ V AL + ++ D G L V Sbjct: 306 FVGTNDFFWPVMKDGTQVGTVTSAVYSPRLDKNIALGMLSVEHTD----IGTQLIVD 358 >gi|209966902|ref|YP_002299817.1| glycine cleavage system T protein [Rhodospirillum centenum SW] gi|209960368|gb|ACJ01005.1| glycine cleavage system T protein [Rhodospirillum centenum SW] Length = 384 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 56/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G L+A++ D+ L R + G IL +++++ Sbjct: 70 SHMGQVRLRGDDPAKALEALVPGDIQGLAEGRIRYTLFTNDHGGILDDLMVTRVGPGELF 129 Query: 67 LEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS------NSSFID 117 L ++ + + + + L R+ V +E + +L+ + ++ Sbjct: 130 LVVNAACKQADLAHL-----RAGLPGVAVEYLGDDAGLLALQGPAAAAVLARHVPAAAAM 184 Query: 118 E--------------RFSIADVLLHRTW-----------------GHNEKIASDIKTYHE 146 R S + + E + Sbjct: 185 PFMSAITADIRGIPVRISRSGYTGEDGYEIGAAGTDAEALARLLLAEPEVAPIGLGARDS 244 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D T P +A + +G + G +V R +RKR Sbjct: 245 LRLEAGLCLYGHDIDT-TTTPVEAALTWAVAKRRREEGGFPGAALVQRQFREGAVRKRVG 303 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258 I+ + I D IG++ V G A+ A+ + L Sbjct: 304 ILPEGRAPAREHTEIQGADGAVIGSITSGGFGPSVNGPVAMGYV--AAAHAAVGTPVNLM 361 Query: 259 VHGVRVKASF 268 V G + A Sbjct: 362 VRGKALPAKV 371 >gi|238763229|ref|ZP_04624194.1| Aminomethyltransferase [Yersinia kristensenii ATCC 33638] gi|238698502|gb|EEP91254.1| Aminomethyltransferase [Yersinia kristensenii ATCC 33638] Length = 365 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 48/118 (40%), Gaps = 1/118 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + R+ ++ + + V + ++ +V ++ + A Sbjct: 110 RLVVNSATREKDLEWITQHAEPYQVGVTVRDDLALVAVQGPTAQQKVATLLTPEQQQA 167 >gi|57340020|gb|AAW49997.1| hypothetical protein FTT0407 [synthetic construct] Length = 393 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 75 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 134 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 135 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIATEIEA 194 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 195 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 254 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 255 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYFAKKAQGVDTKWVGVVLKT 313 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 314 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 369 Query: 265 KASFPH 270 + P Sbjct: 370 ELVKPK 375 >gi|254885156|ref|ZP_05257866.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 4_3_47FAA] gi|319641343|ref|ZP_07996038.1| aminomethyltransferase [Bacteroides sp. 3_1_40A] gi|254837949|gb|EET18258.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 4_3_47FAA] gi|317387024|gb|EFV67908.1| aminomethyltransferase [Bacteroides sp. 3_1_40A] Length = 361 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGSNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99 + ++ KL V + P Sbjct: 116 IEKDWNWCVSHNTVGAELENASDRMAQLAIQGPKAMEVLQKLTP------VNLSEIPYYA 169 Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146 + ++ SN+ + + A + + + Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G D T P +A + + K + + ++ + + + RK Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FTSRALLEKQKAEGLKRKLIAF 287 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 +P G ++ D +IG + K + + + A+ + + V G Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347 Query: 262 VRVKASF 268 ++KA Sbjct: 348 RKLKAVV 354 >gi|119775853|ref|YP_928593.1| glycine cleavage system aminomethyltransferase T [Shewanella amazonensis SB2B] gi|166221566|sp|A1S967|GCST_SHEAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|119768353|gb|ABM00924.1| glycine cleavage system T protein [Shewanella amazonensis SB2B] Length = 364 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 56/163 (34%), Gaps = 3/163 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ D+ L A +L G ++ + + + + Sbjct: 50 SHMTVVDVEGADARAFLRKLLANDIAKLTVPGKALYGGMLNHDGGVIDDLITYYLSDTQY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V I +P ++ + + F E+ + + Sbjct: 110 RVVVNSATREKDLAWIGEQAKGFDVTITERPELAMIAVQGPNAKAKAATVFTAEQNAAVE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166 + + Y E + + + L + Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEAGYEIIVPEAEAEALWQALL 212 >gi|254449174|ref|ZP_05062624.1| glycine cleavage system T protein [gamma proteobacterium HTCC5015] gi|198261220|gb|EDY85515.1| glycine cleavage system T protein [gamma proteobacterium HTCC5015] Length = 363 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 43/303 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL ++ D+ + A +A+L QG ++ +I +E+ F Sbjct: 50 SHMTVVDLHGERVRDFLSYVMANDIAKVTKRGKALYTAMLNEQGGVIDDLIIYYLEDHFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + RD + L +V ++ + ++ + I E F Sbjct: 110 RLVVNAATRDKDLAWLEQQAAAFSVEVKERSDLAMIAVQGPKAIEKALQLIPEEFRESVL 169 Query: 121 --------SIADVLLHRTWGHNE---------KIASDIK--------------TYHELRI 149 +A++ + RT E + A D LR+ Sbjct: 170 ALSKFEACEVAELFVARTGYTGEDGLEIILPNESAPDFWKALDKVGVAPIGLGARDSLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D + P + + + + +IG+ + + + + +K ++ Sbjct: 230 EAGMNLYGNDM-DESTTPLVSALGWTVAMKDERD-FIGRAALEQQKQAGVPQKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + D E+G L K ++ +ARI + ++ + + + R+ Sbjct: 288 GRGVMRAHQKVFVDGDEVGELTSGGFSPTLKNSIGLARIARDSASLGDTVEIEIRNKRIA 347 Query: 266 ASF 268 A Sbjct: 348 ARI 350 >gi|56707556|ref|YP_169452.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis SCHU S4] gi|110670027|ref|YP_666584.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis FSC198] gi|224456624|ref|ZP_03665097.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis MA00-2987] gi|254370078|ref|ZP_04986084.1| glycine cleavage complex protein T [Francisella tularensis subsp. tularensis FSC033] gi|254874374|ref|ZP_05247084.1| aminomethyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|61213243|sp|Q5NHP0|GCST_FRATT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122971051|sp|Q14J42|GCST_FRAT1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54113579|gb|AAV29423.1| NT02FT1677 [synthetic construct] gi|56604048|emb|CAG45040.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110320360|emb|CAL08423.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. tularensis FSC198] gi|151568322|gb|EDN33976.1| glycine cleavage complex protein T [Francisella tularensis subsp. tularensis FSC033] gi|254840373|gb|EET18809.1| aminomethyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158711|gb|ADA78102.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis NE061598] Length = 358 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIATEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYFAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|254485519|ref|ZP_05098724.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter sp. GAI101] gi|214042388|gb|EEB83026.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter sp. GAI101] Length = 814 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 64/318 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A FL DV P + L + I ++++ Sbjct: 489 MSSFGKIRVEGRDATAFLNHIGGGQY--DV---PVGKIVYTQFLNNRAGIEADVTVTRLS 543 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104 E +++ + R + + ++ NV++ VL+ Sbjct: 544 EAAYLVVTPAATRLADQTWMRRHQGGFNVVLTDVTAGEAVLAVMGPNARKLMQAVSPNDF 603 Query: 105 ---------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146 QE R + L + + A +T+ Sbjct: 604 SNEVNPFGTAQEIELGLGLARVHRVTYVGELGWEVYVSTDMAAHAYETFMAAGQDMDLKL 663 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI G D +A + + K +IG++ V R + Sbjct: 664 CGMHMMDCARIEKGFRHFGHDITSEDHV-LEAGLGF--AVKTDKPAFIGRDAVLRKKETG 720 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDKVDH 249 + R+ +T + L P+L D +G L + + + Sbjct: 721 LDRRLVQFKLTDPEPLLYHNEPVLRDGQIVGHLSSGAYGHHLGAAIGMGYVPCKGEAAAD 780 Query: 250 AIKKGMALTVHGVRVKAS 267 + + + G RV A Sbjct: 781 VLASSYEIDIAGTRVTAE 798 >gi|89255887|ref|YP_513249.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. holarctica LVS] gi|115314375|ref|YP_763098.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. holarctica OSU18] gi|156501870|ref|YP_001427935.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009652|ref|ZP_02274583.1| glycine cleavage system T protein [Francisella tularensis subsp. holarctica FSC200] gi|254367248|ref|ZP_04983276.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. holarctica 257] gi|290953376|ref|ZP_06557997.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. holarctica URFT1] gi|295313380|ref|ZP_06803988.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. holarctica URFT1] gi|122325595|sp|Q0BN73|GCST_FRATO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122501109|sp|Q2A4V3|GCST_FRATH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221550|sp|A7NAH6|GCST_FRATF RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|89143718|emb|CAJ78917.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. holarctica LVS] gi|115129274|gb|ABI82461.1| aminomethyltransferase [Francisella tularensis subsp. holarctica OSU18] gi|134253066|gb|EBA52160.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. holarctica 257] gi|156252473|gb|ABU60979.1| glycine cleavage system T protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 358 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|268591711|ref|ZP_06125932.1| glycine cleavage system T protein [Providencia rettgeri DSM 1131] gi|291312671|gb|EFE53124.1| glycine cleavage system T protein [Providencia rettgeri DSM 1131] Length = 364 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 102/309 (33%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ + +D + Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDINKLTEQGKALYTGMLNASGGVIDDLIVYYLADDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--------- 116 L ++ + RD + + + V I ++ ++ + S + Sbjct: 110 RLVVNSATRDKDLAWIEQHAKGYAVEIRVRDDLALLAVQGPQAPEKVHSLLSAEQNSAIE 169 Query: 117 -----------DERFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRI 149 D + + + ++ +H+ LR+ Sbjct: 170 GMKPFYGVQAGDLFIATTGYTGEKGYEIAMPKEQVVEFWHKLLKAGVHPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D TI P A M +IG+E + +++ + K I+ Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALEKLREQGT-EKLVGIVMR 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + +G + D E+G L V +A+AR+ K + + Sbjct: 288 EKGILRAGQVVRFTD-ELGKLQEGVITSGSFSPTLGFSIALARVPNGIQD-KAIVEIRQR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EMPVEVVKP 354 >gi|134302510|ref|YP_001122480.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis WY96-3418] gi|254368725|ref|ZP_04984738.1| aminomethyltransferase [Francisella tularensis subsp. holarctica FSC022] gi|166221552|sp|A4IZK8|GCST_FRATW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|134050287|gb|ABO47358.1| glycine cleavage system T protein [Francisella tularensis subsp. tularensis WY96-3418] gi|157121646|gb|EDO65816.1| aminomethyltransferase [Francisella tularensis subsp. holarctica FSC022] Length = 358 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|297183964|gb|ADI20084.1| glycine cleavage system t protein (aminomethyltransferase) [uncultured alpha proteobacterium EB080_L06A09] Length = 505 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 94/322 (29%), Gaps = 70/322 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I++ G+ A FL DV S L G I I+++ Sbjct: 180 MSSFGKIRIEGRDATKFLNFVAGGQY--DV---EIGKIVYSQFLNNAGGIEADVTITRLT 234 Query: 62 EDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL--------------- 102 E +++ + R + L + + VI ++ GV+ Sbjct: 235 ESAYLVVTPAATRLADQIWLSRNIGDFNV---VITDVTAGEGVLAIMGPSSRKLLQMVSP 291 Query: 103 ----------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------- 144 QE R + L + +++ T Sbjct: 292 NSFDNDVNPFGTAQEIEIGMGLARVHRVTYVGELGWEVYVSSDQAGHIFDTLFDAGQDLD 351 Query: 145 ---------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 LRI G D +A + + +K +IG++ V R + Sbjct: 352 MKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTSKPDFIGRDAVLRKK 408 Query: 196 HRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDK 246 + R+ ++ ++ L PIL D +G L L + + Sbjct: 409 ENGLDRRLLQFVLNDSEPLLYHNEPILRDGELVGHLTSGNYGHTIGAAIGLGYVPCKDET 468 Query: 247 VDHAIKKGMALTVHGVRVKASF 268 V + + V G ++KA Sbjct: 469 VSDILASNYEIDVAGSKIKADV 490 >gi|187477000|ref|YP_785024.1| glycine cleavage system aminomethyltransferase T [Bordetella avium 197N] gi|123514526|sp|Q2KYM2|GCST_BORA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|115421586|emb|CAJ48096.1| glycine cleavage system T protein [Bordetella avium 197N] Length = 366 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 7/128 (5%) Query: 14 VCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A FL+ ++ DV L A S +L PQG ++ +I D++ + ++ Sbjct: 60 ITGPDATAFLRYLVANDVARLNTPGKALYSCMLNPQGGVIDDLIIYYFAPDSWRVVVNAG 119 Query: 73 KRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128 + + ++ + +V+I + ++ + ++ L Sbjct: 120 TAEKDMAW--MARVAAAGNFDVVITPRRDLAMIAVQGPNARAKVWAARPAWQPASEGLGP 177 Query: 129 RTWGHNEK 136 T + Sbjct: 178 FTAAILPE 185 >gi|308501188|ref|XP_003112779.1| hypothetical protein CRE_30811 [Caenorhabditis remanei] gi|308267347|gb|EFP11300.1| hypothetical protein CRE_30811 [Caenorhabditis remanei] Length = 403 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 56/311 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK + F++++ TADV L S +G I +I K ++D L + Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNDKGGIKDDLIIMKTDKDFLFLVTNAG 140 Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------- 107 D + L RS V IE G+V E Sbjct: 141 CIDKDLPYLLENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTEIDLSKLTFMK 200 Query: 108 ------------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--SDIKTYHEL 147 +T + I + A+ L+ R + + L Sbjct: 201 TIVGTVFGIEGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGKVKLAGLGARDAL 260 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPM 205 R+ G+ +D +T P +A + + + + G E +V +++ ++ ++R Sbjct: 261 RLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRRVG 319 Query: 206 IITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +I P S P++ D +G + A+A K + Sbjct: 320 LIAPAGRCPRSHLPLIDPLDKCALGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIVDF 379 Query: 258 TVHGVRVKASF 268 V+ Sbjct: 380 GAKQAPVEVVK 390 >gi|123443589|ref|YP_001007562.1| glycine cleavage system aminomethyltransferase T [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166221578|sp|A1JPN6|GCST_YERE8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122090550|emb|CAL13419.1| aminomethyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 365 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ ++ ++ + V + ++ +V Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTA 152 >gi|91225429|ref|ZP_01260551.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01] gi|91189792|gb|EAS76065.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01] Length = 372 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 54 SHMGQLRLIGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118 + ++ + + I L + L S V +EI ++ + + F E Sbjct: 113 VVVNAACKAQDIAHLQAH-LPSGVELEIIEDRALLAIQGPKAAAVLARFAPEVSEMLFMD 171 Query: 119 --------------RFSIADVLLHRTWGHNEK--------IASDIKTY------HELRIN 150 R + +K A D + LR+ Sbjct: 172 ICKVDVLGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTATTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G + D ++IG + ++ R D + + Sbjct: 292 LVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTEVFAEVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKMLPMTVEK 361 >gi|312881451|ref|ZP_07741245.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370873|gb|EFP98331.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 372 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL++++ D++ LP R + QG I+ +++ + D Sbjct: 54 SHMGQLRLHGAGAAAFLESLVPVDIIDLPSGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----------- 115 + ++ + ++ I L + L V +E+ ++ + + F Sbjct: 113 VVVNAACKEQDISHLQAH-LPQGVELEVIDDRALLALQGPKAVDVLARFNSSVAEMLFMD 171 Query: 116 -----------IDERFSIADVLLHRTWGHNEK--------IASDIKTY------HELRIN 150 I R + NEK A + + LR+ Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNEKAEELADKLTAEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D +T +L+ + + G + G +++ +I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTAGERAGGFPGADIILEQIETKDVSRKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + ++ ++G + ++A R D + + Sbjct: 292 LVGQTKAPVREGAELFDSEGSKVGIVTSGTAGPNAGKPVSMAYVRADLAAIGTELFADVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKQLPMTIEK 361 >gi|153836376|ref|ZP_01989043.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810] gi|149750278|gb|EDM61023.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810] Length = 376 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 105/310 (33%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 58 SHMGQLRLIGEGAATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------FSNSSFID 117 + ++ + ++ I L + L S V +E+ ++ + ++ F+D Sbjct: 117 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFASEVADMLFMD 175 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R A+ L + E + LR+ Sbjct: 176 IRKVEILGVECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 295 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G + D +IG + ++ R D + + Sbjct: 296 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355 Query: 259 VHGVRVKASF 268 + + Sbjct: 356 GKMLPMTVEK 365 >gi|325275604|ref|ZP_08141506.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51] gi|324099278|gb|EGB97222.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51] Length = 374 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L+ ++ D++ LP + R + + G IL +++++ +D Sbjct: 55 SHMGQICLRGVDAGKALERLVPVDIVDLPVGMQRYALFTSADGGILDDLMVARLADDELF 114 Query: 67 LEIDRSKRDSLIDKLLFY--------KLR-SNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 L ++ + ++ + L + L S ++ +Q + + +F Sbjct: 115 LVVNAACKEQDLRHLQQHLEGLCEVESLFDSRALLALQGPAAARVLARLAPEVTGMTFMQ 174 Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I A +L E A + LR+ Sbjct: 175 FAPLRLLGVDCYVSRSGYTGEDGYEISVPVEAALMLARSLLAEPEVAAIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ D T P +A + G + G E + Q + KR Sbjct: 235 AGLCLYGHDMETRTT-PIEASLAWAISKVRRADGERAGGFPGAEQIFAQQRDGVASKRVG 293 Query: 206 IITGTDDLPPSGS-PILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G+ + + IG + G A+ + ++ + + Sbjct: 294 LLPKERVPVREGTLTVNAREEVIGRVTSGGFGPSLGGPLAMGYVQSEQAALDSEVFAQVR 353 Query: 259 VHGVRVKASF 268 V ++ Sbjct: 354 GKLVPMQVVR 363 >gi|282890247|ref|ZP_06298777.1| hypothetical protein pah_c014o129 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499904|gb|EFB42193.1| hypothetical protein pah_c014o129 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 347 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 51/293 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A L+++ T + A + + +G + ++ + F Sbjct: 48 LSHMGRIDVEGADAEQLLESLSTNIISGKMNGSATYTVWINAEGGSVDDLIVYRQSPTQF 107 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFSNSSFIDER 119 + ++ S RD + L + + V I + +G++ + H F ++S I Sbjct: 108 FVIVNASNRDKDLKFLEDHAQKLRVEITPRYNDGILAIQGPQAPSMVSHLFPSASVIKPM 167 Query: 120 F----------SIADVLLHRTWGHNEKIASD-----IKTY---------------HELRI 149 I + G E +AS+ + Y LR+ Sbjct: 168 HFEELIYDGEQLILSATGYTGSGGFEILASEKIIKQLWHYFVDQEKIPPIGLGARDTLRL 227 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + TI P ++ ++ ++ K + ++ R R ++ Sbjct: 228 EMGYALYGHEL-SDTISPPES----VSAWTVKKALPV-------LEKRATKRYAYGVVLL 275 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKAL--AIARIDKVDHAIKKGMALTVH 260 + G+ +L+ EIG + +L A+A I V+ + G + V Sbjct: 276 EKGIAREGNEVLSAGEEIGYVTSGTYSPSLQKAVALI-LVNKKLTAGSLVEVQ 327 >gi|124024641|ref|YP_001018948.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9303] gi|166221562|sp|A2CDX3|GCST_PROM3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123964927|gb|ABM79683.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9303] Length = 374 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 102/305 (33%), Gaps = 50/305 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ G + LQA++ D+ + A + +L G IL ++ K + Sbjct: 51 SHMGVLRLEGTNPKDTLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVVYDLGTNKQD 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSS 114 + ++ I+ + ++ L + + + + NGV+L+ E S Sbjct: 111 SQSLLIVINAACSETDTIWLKQHLQPAGIALSDAKNNGVLLALQGPQATKVLERLSGESL 170 Query: 115 FIDERFSIADVLLHRTWGHNE--------------------KIASDIKTYHELRINHGIV 154 RF V + + + + + +LR I Sbjct: 171 ASLPRFGHRQVQFYGLGAEDPSSVFIARTGYTGEDGFELLLEAEAGRALWLQLRAEGVIP 230 Query: 155 D--PNTDFLPSTIFPHDALMDL-LNGISLTKGC-----------YIGQEVVSRIQHRNII 200 + D L H D+ +N G ++G+ + + + I Sbjct: 231 CGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAPFMGRTALEQQAEQGPI 290 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMA 256 R+ + + G P+L ++ ++G + +A+A+ + I +A Sbjct: 291 RRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVA 350 Query: 257 LTVHG 261 + + G Sbjct: 351 VEIRG 355 >gi|330501304|ref|YP_004378173.1| glycine cleavage system aminomethyltransferase T [Pseudomonas mendocina NK-01] gi|328915590|gb|AEB56421.1| glycine cleavage system aminomethyltransferase T [Pseudomonas mendocina NK-01] Length = 360 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A +LQ ++ DV L A SA+L QG ++ ++ E + Sbjct: 50 SHMCVVDLSGSQAQAYLQRLLANDVARLENPGKALYSAMLNEQGGVIDDLIVYLTEG-GY 108 Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV-IIEIQPINGVVL 102 L ++ RD + L + R+ V + Q ++ Sbjct: 109 RLVLNAGTRDKDLAWMHAQAGDFDVQLHERRDLAMLAIQGPKARARVSELLTQARAALIH 168 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149 + R ++ S + LR+ Sbjct: 169 ELKPFQGLPEGDWFIARTGYTGEDGLEIVLPVTEVVSFLNDLVGAGISPIGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D + P A M +IG+ + + K ++ Sbjct: 229 EAGMNLYGQDM-DEQVSPLAANMAWTIAWEPVARDFIGRSALEAQRATGCPSKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVEGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVRPS 351 >gi|187931358|ref|YP_001891342.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. mediasiatica FSC147] gi|238691542|sp|B2SFM1|GCST_FRATM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|187712267|gb|ACD30564.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella tularensis subsp. mediasiatica FSC147] Length = 358 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ D+ L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDIAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|85059980|ref|YP_455682.1| glycine cleavage system aminomethyltransferase T [Sodalis glossinidius str. 'morsitans'] gi|123518894|sp|Q2NRE8|GCST_SODGM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|84780500|dbj|BAE75277.1| aminomethyltransferase [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F Sbjct: 50 SHMTIVDLAGPRTRDFLRHLLANDVAKLTVPGKALYTGMLNASGGVIDDLIVYFLSEIEF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ RD ++ + + V + ++ ++ + Sbjct: 110 RLVVNSETRDKDVEWITRHAEPYQVTVTVRDDLALIAVQGPQA 152 >gi|146305371|ref|YP_001185836.1| glycine cleavage system aminomethyltransferase T [Pseudomonas mendocina ymp] gi|145573572|gb|ABP83104.1| glycine cleavage system T protein [Pseudomonas mendocina ymp] Length = 365 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS----KIE 61 S+ + V G A FLQ ++ DV L A SA+L QG ++ ++ + Sbjct: 50 SHMCVVDVTGSQAQAFLQRLLANDVARLDSAGKALYSAMLNEQGGVIDDLIVYLTGSSAQ 109 Query: 62 EDTFILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV-IIEIQPIN 98 E ++ L ++ RD + L + R+ V + Q Sbjct: 110 EQSYRLVVNAGTRDKDLAWMHAQAGDFDVQLRERRDLAMLAIQGPKARARVAELLTQARA 169 Query: 99 GVVLSWNQEHTFSNSSFIDER------------FSIADV--LLHRTWGHNEKIASDIKTY 144 ++ + + R +A+V LL+ G + Sbjct: 170 ALIHELRPFQGLAEGDWFIARTGYTGEDGLEIVLPVAEVVPLLNELVGAGIAPIG-LGAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D ++ P A M +IG+ + + K Sbjct: 229 DTLRLEAGMNLYGQDM-DESVSPLAANMAWTIAWEPAARAFIGRAALEAQRAAGCPSKLV 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 ++ + + + + I G + K++A+AR+ + + + Sbjct: 288 GLVLEERGVLRAHQVVRVEGIGEGEITSGSFSPTLNKSIALARVPTATGE-RAEVEIRGK 346 Query: 261 GVRVKASFPH 270 V+ P Sbjct: 347 WYPVRVVRPS 356 >gi|305667590|ref|YP_003863877.1| aminomethyltransferase [Maribacter sp. HTCC2170] gi|88709640|gb|EAR01873.1| aminomethyltransferase [Maribacter sp. HTCC2170] Length = 361 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 103/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G +A+ +Q + + D L A+ S + G I+ ++ K++++T++ Sbjct: 49 SHMGEFLVEGPNALDLIQKVTSNDASKLTIGKAQYSCLPNETGGIIDDLIVYKVKDETYL 108 Query: 67 LEIDRSKRDSLIDKLLF---------------YKLRS----NVIIEIQPINGVVLSWNQE 107 L ++ S + + + Y L + + +Q I V LS + Sbjct: 109 LVVNASNIEKDWNHISKYNNEFNAEMKNISEGYSLLAIQGPKAVEAMQSITSVDLSAIKF 168 Query: 108 HTFSNSSFIDERFSIADVLLH----------------RTWGHNEKIASD-------IKTY 144 + F + F I + + W + +D + Sbjct: 169 YNFVVADFAGLEHVIISATGYTGSGGFEIYCKNSEVKQVWDKIFEAGADFGIKPIGLAAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D T P +A + + TK ++ E +++ + RK Sbjct: 229 DTLRLEMGYCLYGNDISDETS-PFEAGLGWI--TKFTKD-FVNSEALAKEKEHGAKRKLI 284 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 +P G I+ IG + K + + + K+ + + + + Sbjct: 285 AFELDDRGIPRQGYDIVDGQGKTIGEVTSGTMSPSLGKGIGLGYVPKIFTEVGSKINIQI 344 Query: 260 HGVRVKASF 268 V AS Sbjct: 345 RKNAVPASV 353 >gi|83951701|ref|ZP_00960433.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] gi|83836707|gb|EAP76004.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] Length = 819 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 58/285 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A L ++ + IA + +L G+I L + ++ D F L Sbjct: 501 VELSGPEAETLLDRLVANRLPRKTGGIA-LTHMLNAAGRIELETTVVRLASDRFYLVCAA 559 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERF 120 L+D L ++ ++V + ++ + L+ N + N++F Sbjct: 560 FFEQRLLDHLDRHRGTADVTVTLRSNDWAALTLNGPRSRDILATCTDAPLDNAAFPWLTA 619 Query: 121 SIADVLLHRTWGHNEKIA------------SDIKTYHELRINHGIVDPNTDFLP------ 162 V HR W A + + Y L G D+ Sbjct: 620 QEITVAGHRLWAFRMSYAGELGWEFHMPRDAALAVYDAL-WAAGAPLGLADYGSFAMNAM 678 Query: 163 --------STIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + ++ + + + + YIG+E +R + Sbjct: 679 RMEKGFKGAGELTNEVTLAEADVLRFARTDKAYIGREATL------APARRFVCAYLEIA 732 Query: 213 LPPS-----GSPILTDDIEIGTLGVVVGKK------ALAIARIDK 246 + G +L +G+ V A A R + Sbjct: 733 PDGAHDGHGGEAVLLQGKVVGSTASVAYGHSCGKILAFAYVRPEA 777 >gi|288922561|ref|ZP_06416741.1| glycine cleavage system T protein [Frankia sp. EUN1f] gi|288346079|gb|EFC80428.1| glycine cleavage system T protein [Frankia sp. EUN1f] Length = 371 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 88/300 (29%), Gaps = 55/300 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ F+ + +T D+ + A+ + G ++ + +D Sbjct: 60 SHLGKARVRGAGAVDFVNSCLTNDLRRIGPGQAQYTLCCDETGGVVDDLIAYFYADDDVF 119 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE-----------HTFSNSS 114 L + + ++ +L S V + ++ GV+ + S Sbjct: 120 LVPNAANTAEVVRRLAA-AAPSGVAVTDLHTDYGVLAVQGPASVQVLAALGLPADGAYMS 178 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HEL 147 F D + V++ R+ E + + L Sbjct: 179 FADADWKGRPVVVCRSGYTGEIGFELLPRWEDAVLLWDEVLAAAAGVGGLACGLGARDTL 238 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G D +I P A + K + G+E + + R + Sbjct: 239 RTEMGYPLHGQDLSL-SISPVQARSGW--AVGWDKPAFWGREALLAERAAGAARSLWGLR 295 Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + +P + E+G + LA+ D ++ G +TV Sbjct: 296 SNDRGIPRPHMRVTGAGGAEVGEVTSGTFSPTLRQGIGLALL-----DRSVTAGDTVTVD 350 >gi|328470598|gb|EGF41509.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus 10329] Length = 372 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 54 SHMGQLRLIGEGAATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118 + ++ + ++ I L + L S V +E+ ++ + + F E Sbjct: 113 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFAPEVTDMLFMD 171 Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 172 IRKVEILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G + D +IG + ++ R D + + Sbjct: 292 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKMLPMTVEK 361 >gi|327405916|ref|YP_004346754.1| Aminomethyltransferase [Fluviicola taffensis DSM 16823] gi|327321424|gb|AEA45916.1| Aminomethyltransferase [Fluviicola taffensis DSM 16823] Length = 360 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ +Q + T D TL A+ S + +G ++ ++ +I+E+ ++ Sbjct: 49 SHMGEFLISGPDALDLIQRVTTNDASTLTIGRAQYSCLPNGKGGLVDDLIVYRIKEEEYL 108 Query: 67 LEIDRSKRD 75 L ++ S D Sbjct: 109 LVVNASNID 117 >gi|238798649|ref|ZP_04642124.1| Aminomethyltransferase [Yersinia mollaretii ATCC 43969] gi|238717535|gb|EEQ09376.1| Aminomethyltransferase [Yersinia mollaretii ATCC 43969] Length = 365 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSGMLNASGGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ +V Sbjct: 110 RLVVNSATRDKDLAWITQHAEPYQVDVTVRDDLALVAVQGPTA 152 >gi|260770118|ref|ZP_05879051.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio furnissii CIP 102972] gi|260615456|gb|EEX40642.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio furnissii CIP 102972] Length = 381 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 56/293 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A L+ ++ DV+ L R + QG IL +++ + D Sbjct: 63 SHMGQLRLHGEGAAAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVANLG-DHLF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117 + ++ + +D I+ L + L S V +EI ++ + ++ F+D Sbjct: 122 VVVNAACKDQDINHLQAH-LPSGVELEIVDDRALLALQGPKAAEVLARLQPAVADMLFMD 180 Query: 118 -------------ERFSIADVLLHRT---WGHNEKIASDIKTYHE-----------LRIN 150 R + E +A + + E LR+ Sbjct: 181 IQQVQIDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSLRLE 240 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202 G+ D T P +A + G +G + G +++ S+I +++ RK Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRTGGA--REGGFPGADIILSQIATKDVSRK 297 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVD 248 R ++ T G+ + D ++IG + ++A R D Sbjct: 298 RVGLVGQTKAPVREGTELFDADGVKIGLVTSGTAGPTAGIPVSMAYVRADLAA 350 >gi|167041581|gb|ABZ06329.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_008G09] Length = 468 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 82/280 (29%), Gaps = 63/280 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A F +IT D + R + +G +L ++ ++ +D F + Sbjct: 116 IRVKGPDAEKFTDYVITRDAKKISPMRGRYVVLCNYKGGVLNDPVLMRVADDEFWFSLSD 175 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118 S + + K R V I+ V + + D+ Sbjct: 176 SDIGMYLQGVNADK-RYKVEIDEIDACPVQIQGPKAKALMQDLIGDQVDIDNIPFYGLAE 234 Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150 + + + + N + A D+ H RI Sbjct: 235 AKIGKRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 294 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG------CYIGQEVVSRIQHRNIIRKRP 204 GI+ D P + +S KG Y+G+E + +++ + ++P Sbjct: 295 AGILSWGQDM-DQEHNPFQCNLGYQVSLS-GKGEWNKQEDYVGKEALEKMKEQLKNGEKP 352 Query: 205 MIITGTDDLPPSGSPI------------LTDDIEIGTLGV 232 + L G PI + +G + Sbjct: 353 YKLQLVG-LELGGKPIEEYAPDFWLISNKSGSKPVGYITS 391 >gi|265756182|ref|ZP_06090511.1| glycine cleavage system T protein [Bacteroides sp. 3_1_33FAA] gi|263233773|gb|EEZ19382.1| glycine cleavage system T protein [Bacteroides sp. 3_1_33FAA] Length = 361 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V TL A+ + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGPNALEFLQQVTSNNVATLLVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99 + ++ KL V + P Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169 Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146 + ++ SN+ + + A + + + Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G D T P +A + + K +I + ++ + + + RK Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 +P G ++ D +IG + K + + + A+ + + V G Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347 Query: 262 VRVKASF 268 ++KA Sbjct: 348 RKLKAVI 354 >gi|254712518|ref|ZP_05174329.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M644/93/1] gi|254715590|ref|ZP_05177401.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M13/05/1] gi|261217334|ref|ZP_05931615.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M13/05/1] gi|261320207|ref|ZP_05959404.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M644/93/1] gi|260922423|gb|EEX88991.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M13/05/1] gi|261292897|gb|EEX96393.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M644/93/1] Length = 367 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 37/261 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALLAK--TCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D P T L + K + G + V + KR + Sbjct: 234 LCLHGQDITPETDPVLAGLTWAITKAVREKAAFNGAKAVLDAIAKGASAKRVGLKPEGRQ 293 Query: 213 LPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 294 PVRAGADLFDESGRQIGTVTS 314 >gi|325115232|emb|CBZ50787.1| putative protein phosphatases pp1 regulatory subunit [Neospora caninum Liverpool] Length = 885 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 4/124 (3%) Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG--HNEKIASDIKTYHELRINHGIV 154 ++ ++ + ++++ ++ R + + L + + S + Y R G+ Sbjct: 298 VDVCGVTETEAGKNADAASLETRLAASSFLHAYSPSVLLASRGLSSPQLYELRRRALGVP 357 Query: 155 DPNTDFLPSTIFPHDALMDLLNGIS--LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + + MD I + KGC++GQEVV+R + R+R Sbjct: 358 EGPAEVGIQRYLLQHLNMDWQAYIHPRVNKGCFLGQEVVTRALLQLSNRRRLASFVIVSR 417 Query: 213 LPPS 216 + Sbjct: 418 AQEA 421 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 18/69 (26%) Query: 43 AILTPQGKILLYFLISKI------------------EEDTFILEIDRSKRDSLIDKLLFY 84 A+L QG++LL + + +ED F+L++D + D L L Sbjct: 24 ALLNTQGRVLLDGHVVHLPRKEAGEASEAEDGLRVADEDAFLLDVDAAVGDRLFSFLQRR 83 Query: 85 KLRSNVIIE 93 +L S V ++ Sbjct: 84 RLSSRVEVK 92 >gi|254482917|ref|ZP_05096153.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2148] gi|214036789|gb|EEB77460.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2148] Length = 369 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 103/307 (33%), Gaps = 45/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G L++++ DV L + + QG +L +I++ +D F Sbjct: 52 SHMGQVIIEGAGVAAMLESLVPVDVEGLGINCQTYALLTNDQGGVLDDLIITRWAQDKFF 111 Query: 67 LEIDRSKRDSLIDKLLFY------KLRSN-------------VIIEIQPINGVVLSWNQE 107 L ++ + ++ I L + K+ S+ V+ E+ P ++ Sbjct: 112 LVVNAACKEQDIAHLRSHLAGQSMKVLSDQALLALQGPKAREVMSELCPAAVELVFMQGC 171 Query: 108 HTFSN--------SSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + S + E ADVL R + + LR+ G Sbjct: 172 AATIDGIEVYITCSGYTGEDGFEVSMPNGAADVLARRILDFEQVEPIGLGARDSLRLEAG 231 Query: 153 IV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMII 207 + + NT+ P ++ G + G + + RI ++ +R+ + + Sbjct: 232 LCLYGHELNTEIDPVQAGLLWSVSKSRRADGARAGGFPGSDTIFDRIINKPDLRRVGLTV 291 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261 G + + + + +G + G A+A + D + + + Sbjct: 292 DGKRPVREGQTVLNANGEAVGEICSAAYGASLGGPIAMAYVQRQLGDPGTELAVDVRGKL 351 Query: 262 VRVKASF 268 + V + Sbjct: 352 LPVTVTK 358 >gi|153954399|ref|YP_001395164.1| hypothetical protein CKL_1774 [Clostridium kluyveri DSM 555] gi|219854990|ref|YP_002472112.1| hypothetical protein CKR_1647 [Clostridium kluyveri NBRC 12016] gi|146347280|gb|EDK33816.1| GcvT [Clostridium kluyveri DSM 555] gi|219568714|dbj|BAH06698.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 362 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 36/69 (52%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G+ A+ L ++T + + AR S + +G ++ ++ K++++ ++ Sbjct: 51 SHMGEITCRGEDALKNLNHLLTNNFEGMYDGQARYSPMCNEKGGVVDDMIVYKVKDNDYL 110 Query: 67 LEIDRSKRD 75 + ++ + +D Sbjct: 111 IVVNAANKD 119 >gi|301168497|emb|CBW28087.1| putative aminomethyltransferase [Bacteriovorax marinus SJ] Length = 359 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 102/303 (33%), Gaps = 50/303 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V GK A+ F+ IIT D + A S + G ++ + K+ + + Sbjct: 51 SHMGEFFVTGKDAVAFVDYIITNDFAGAELEKAVYSPLCREDGTVIDDLIAYKLGSEKVL 110 Query: 67 LEIDRSKRD---------------SLIDKLLFYKL------RSNVIIE----IQPINGVV 101 + ++ + + L++K Y L ++ +++ I + +V Sbjct: 111 ICVNAANIEKDWSWISSHTQGFEIELVNKSNDYSLLAVQGPKAQEVLKSIEIINDSDELV 170 Query: 102 LSWNQEHTFSNSSFIDERFSIAD-------------VLLHRTWGHNEKIASDIKTYHELR 148 +E T N I R L + + + LR Sbjct: 171 YYSAKELTRMNEQIIVARTGYTGEDGFEVFTSHEMAQTLWQKLLDAGATPCGLASRDVLR 230 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + + + P DA + + K +IG+E + + +KR + ++ Sbjct: 231 LEVCYPLYGHEL-NDELTPLDASLKWT--VKGAKEKFIGKEALEGA----VSKKRLVKLS 283 Query: 209 GTDDLPPSGSPILT-DDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G IL D IG + V K +A+ +D+ K + + Sbjct: 284 LDKGIPREGYNILNMSDEVIGVVTSGTMSVELSKGIALGLVDRDKFPEDKKFKINIRKNN 343 Query: 264 VKA 266 ++A Sbjct: 344 IEA 346 >gi|118473206|ref|YP_888555.1| glycine cleavage system aminomethyltransferase T [Mycobacterium smegmatis str. MC2 155] gi|118174493|gb|ABK75389.1| glycine cleavage system T protein [Mycobacterium smegmatis str. MC2 155] Length = 365 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 44/307 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A ++ + +T D+ + A+ + T G ++ + + +D Sbjct: 53 SHLGKALVKGPGAAAYVNSALTNDLGKIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 112 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + +++++L + RS ++ +Q V+ + Sbjct: 113 LVPNAANTATVVEELQRHAPDGLTITNEHRSYAVLAVQGPKSAEVLDKLGLPTDMDYMGY 172 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIVDP---NTDFL 161 D F V + RT E + + +R G Sbjct: 173 ADAEFDGVFVRVCRTGYTGEHGYELLPAWDRAGVVFDALVAAVRAAGGEPAGLGARDTLR 232 Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 +P H+ +D+ + K + G++ + + R + Sbjct: 233 TEMGYPLHGHELSLDISPLQARCGWAVGWKKDAFWGRDALLAEKADGPKRVLRGLKALGR 292 Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GVR 263 + + +L D +G K +A+A ID ++ I G +TV V Sbjct: 293 GVLRADLAVLDGDTRVGVTTSGTFSPTLKVGIALALID-TEYDIADGTTVTVDVRGRAVE 351 Query: 264 VKASFPH 270 + P Sbjct: 352 CEVVKPP 358 >gi|118497104|ref|YP_898154.1| glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. novicida U112] gi|194323401|ref|ZP_03057178.1| glycine cleavage system T protein [Francisella tularensis subsp. novicida FTE] gi|208778897|ref|ZP_03246243.1| glycine cleavage system T protein [Francisella novicida FTG] gi|166221551|sp|A0Q585|GCST_FRATN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|118423010|gb|ABK89400.1| glycine cleavage complex protein T (aminomethyltransferase) [Francisella novicida U112] gi|194322256|gb|EDX19737.1| glycine cleavage system T protein [Francisella tularensis subsp. novicida FTE] gi|208744697|gb|EDZ90995.1| glycine cleavage system T protein [Francisella novicida FTG] Length = 358 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYGADMDISTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|284172775|ref|YP_003406157.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena turkmenica DSM 5511] gi|284017535|gb|ADB63484.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena turkmenica DSM 5511] Length = 850 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 96/308 (31%), Gaps = 59/308 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G+ A FLQ I + D+ + R S +L G IL +++++ED +++ Sbjct: 536 IMVEGEDAGDFLQRICSNDMD-VDTGRVRYSTMLNEGGTILADITVARLDEDEYMVTTGG 594 Query: 72 SKRDSLI-DKLLFYKLRSNVIIEIQPINGVVLS-WNQ----------EHTFSNSSF---- 115 + L + V + ++ + W + SN F Sbjct: 595 GNSPGIHGSWLQEHA-PDTVSVTVEESAKCTVGLWGPKSRLLLQRVTDADVSNDEFPYFS 653 Query: 116 -----------IDERFSIADVLLHRTWGHNE----------KIASDIK-------TYHEL 147 I R S L W +E + D+ + Sbjct: 654 CKRLYVGDVPVIALRVSYVGELGWELWAPSEYGQKLWNTLWEAGQDLDVRAMGGGALESM 713 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMI 206 R+ G TD + P +A + + L +IG+E + + I + Sbjct: 714 RLEKGFRLWGTDIDTD-VNPLEAGLPF--AVDLDTE-FIGKEALVEAKEEGIDTEVACLT 769 Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + + D+ G P+L D +G + V A + D + + Sbjct: 770 LDDSTDVMLGGRPVLADGEAVGYVQAGDYGYSVGESIAYTYLPSEYADAGTS--VQIECE 827 Query: 261 GVRVKASF 268 G A+ Sbjct: 828 GETYDATV 835 >gi|325676916|ref|ZP_08156588.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707] gi|325552216|gb|EGD21906.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707] Length = 371 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 55/315 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A +TAD+ + A+ + T G ++ + + +D Sbjct: 54 SHLGKALVAGAGAADFVNATLTADLGKIGPGQAQYTLCCTETGGVVDDLIAYYVADDEVF 113 Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NV-----------IIEIQPI 97 L + + ++ +L Y + + I I I Sbjct: 114 LVPNAANTADVVARLQAAAPEGIEITDQHRDYAVFAVQGPKAGEVLAALDLRGDIAIADI 173 Query: 98 NGVVLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK---T 143 + + + H T + R++ A+ L ++ Sbjct: 174 DYMGFADMDWHGVPVRVCRSGYTGERGFELLPRWADAEALFRALIDAVRAQGGEVAGLGA 233 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G + I P A I K + G++ ++ + R+ Sbjct: 234 RDTLRTEAGYPLHGHELSLD-ISPLQARCGW--AIGWAKPQFWGRDALTAEKAAGPARRM 290 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I + G + D IG K +A+A +D + G ++V Sbjct: 291 WGIKALDRGVLRQGQTVSKDGASIGETTSGTFSPTLKVGIALALLDTASG-VAAGDEISV 349 Query: 260 H----GVRVKASFPH 270 +R + P Sbjct: 350 DVRGRSLRCEVVTPP 364 >gi|256059091|ref|ZP_05449300.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae 5K33] gi|261323039|ref|ZP_05962236.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae 5K33] gi|261299019|gb|EEY02516.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae 5K33] Length = 367 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 HQPVRAGADLFDESGRQIGTVTS 314 >gi|239928800|ref|ZP_04685753.1| glycine cleavage system aminomethyltransferase T [Streptomyces ghanaensis ATCC 14672] gi|291437120|ref|ZP_06576510.1| glycine cleavage system aminomethyltransferase T [Streptomyces ghanaensis ATCC 14672] gi|291340015|gb|EFE66971.1| glycine cleavage system aminomethyltransferase T [Streptomyces ghanaensis ATCC 14672] Length = 375 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 58/310 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-- 62 LS+ I V G A FL A++ + ++ AR + I G IL ++ ++ E Sbjct: 53 LSHMGEITVTGPQAAAFLDHALVGN-IGSVKPGRARYTMICREDGGILDDLIVYRLGEAE 111 Query: 63 -DTFILEIDRSKRDSLIDKL---------------LFYKLRS--------------NVII 92 +++ + S +++D L Y L + + + Sbjct: 112 APEYLVVANASNAQTVLDALVERSAGFDAEVRDDRDAYALLAVQGPESPGILKGLTDADL 171 Query: 93 E-----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASD 140 E + + ++ F+ ++ L + Sbjct: 172 EGLKYYSGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQALTEAGAGAGLVPCG 231 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199 + LR+ G+ + ++ P DA + + K G ++G+ ++ R Sbjct: 232 LSCRDTLRLEAGMPLYGNELST-SLTPFDAGFGRV--VKFEKEGDFVGRAALAEAAARTE 288 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI- 251 R ++ +P +G ++ IG + L A+A +D A Sbjct: 289 QNPPRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAAPG 348 Query: 252 KKGMALTVHG 261 G+A+ + G Sbjct: 349 TAGVAVDIRG 358 >gi|313501171|gb|ADR62537.1| GcvT_2 [Pseudomonas putida BIRD-1] Length = 360 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E + Sbjct: 50 SHMTVIDVDGTDATVWLQHLLANDVARLDDTGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + R ++D L + +V +++P ++ ++ + A Sbjct: 109 RLVTNAATRAKVLDWLQSQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164 Query: 126 LLHRTWGHNEKIASDIK 142 L R E +A Sbjct: 165 ALIRELRPFEGVADGDW 181 >gi|297202508|ref|ZP_06919905.1| glycine cleavage system T protein [Streptomyces sviceus ATCC 29083] gi|197709965|gb|EDY53999.1| glycine cleavage system T protein [Streptomyces sviceus ATCC 29083] Length = 372 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 54/294 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + ++ AR + I G IL ++ ++ E Sbjct: 53 LSHMGEITVTGPQAAQLLNFALVGN-IASVGVGRARYTMICQADGGILDDLIVYRLGETE 111 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 +++ + S ++D L + + + ++ + +S D Sbjct: 112 YMVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALIAVQGPQSPGILASLTDADLDGL 171 Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 + L+ RT E K ++ + Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGVGLVPCGLSC 231 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202 LR+ G+ + + P DA + + + K G ++G+E + R R Sbjct: 232 RDTLRLEAGMPLYGHELSRE-LTPFDAGLGRV--VKFEKDGDFVGREALQRAAERAAAAP 288 Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249 +++ + +P +G ++ IG + + +A+A +D Sbjct: 289 PRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHA 342 >gi|254720300|ref|ZP_05182111.1| glycine cleavage system aminomethyltransferase T [Brucella sp. 83/13] gi|265985318|ref|ZP_06098053.1| glycine cleavage system aminomethyltransferase T [Brucella sp. 83/13] gi|306837396|ref|ZP_07470272.1| glycine cleavage system T protein [Brucella sp. NF 2653] gi|264663910|gb|EEZ34171.1| glycine cleavage system aminomethyltransferase T [Brucella sp. 83/13] gi|306407439|gb|EFM63642.1| glycine cleavage system T protein [Brucella sp. NF 2653] Length = 367 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDHGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNESASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPASEARALAEKLLADDRVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|290770108|gb|ADD61869.1| putative protein [uncultured organism] Length = 362 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + ++ L + + G I+ L+ E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + + ++ I +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLTSINLSDLPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K + LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + ++ + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293 Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + + D IG + + R + + + + ++ Sbjct: 294 IPRHGYELYSTDGTAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|329936885|ref|ZP_08286564.1| glycine cleavage system aminomethyltransferase T [Streptomyces griseoaurantiacus M045] gi|329303810|gb|EGG47694.1| glycine cleavage system aminomethyltransferase T [Streptomyces griseoaurantiacus M045] Length = 378 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 104/310 (33%), Gaps = 58/310 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---E 61 LS+ I V G A L A++ D+ TL AR + I G IL ++ ++ E Sbjct: 56 LSHMGEITVTGPDAPALLNHALV-GDLATLAAGRARYTMICRADGGILDDLIVYRLADAE 114 Query: 62 EDTFILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + S +++D L V+ + + ++ +S + Sbjct: 115 HPVYLVVANASNARTVLDALTERAAGFDAVVRDDRDAYALLAVQGPASPGILASLTEADL 174 Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 + L+ RT E A K + Sbjct: 175 DGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPADAEKLWQALTEAGASAGLVPCG 234 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG---QEVVSRIQH 196 LR+ G+ + + + P DA + + + K G ++G + Sbjct: 235 LSCRDTLRLEAGMPLYGNELSTA-LTPFDAGLGRV--VKFGKEGDFVGREALAEAAERAE 291 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI- 251 +N R ++ +P +G P+L D IG + L A+A +D A Sbjct: 292 QNPPRVLVGLVAEGRRVPRAGYPVLADGTVIGEVTSGAPSPTLGKPIAMAYVDAAHAAPG 351 Query: 252 KKGMALTVHG 261 G+A+ + G Sbjct: 352 TAGVAVDIRG 361 >gi|156382105|ref|XP_001632395.1| predicted protein [Nematostella vectensis] gi|156219450|gb|EDO40332.1| predicted protein [Nematostella vectensis] Length = 873 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 85/274 (31%), Gaps = 66/274 (24%) Query: 13 KVCGKSAIPFLQAIITADV---LTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILE 68 +V GK FL DV +LP S +LTP+G++ +S + ED ++L Sbjct: 543 EVTGKDTKIFL------DVMFANSLPKIGTTNISHLLTPRGRVYAEMTVSALGEDHYLLL 596 Query: 69 IDRSKRDSLIDKLLFYKLR--SNVIIE--IQPINGVVLSWNQEHT--------------- 109 + L + +V E ++ + ++ + Sbjct: 597 TGSGSEFHDLRWLKKHATEGGYDVTFENLTDKVDTLGVAGPKARDVLQKLTTEDMSHGKF 656 Query: 110 ---------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------- 146 + R S L + E +K Y+ Sbjct: 657 KFLNVKDIEMAGVPVRAIRISYTGELGWELYCSKEHT---LKLYNAIMEAGQEFGIDNFG 713 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199 LR+ G + T P +A +D I KG +IG+E + + + + Sbjct: 714 TFAMTTLRVEKGFRAWGLEMNLDTT-PLEAGLDFF--IKFDKGVNFIGREALLKQKEEGV 770 Query: 200 IRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGV 232 R+ M+ T D P G+ I +G Sbjct: 771 KRRLCMLTVETTDTDPEGNESIWFGGKVVGNTTT 804 >gi|312140202|ref|YP_004007538.1| aminomethyltransferase [Rhodococcus equi 103S] gi|311889541|emb|CBH48858.1| aminomethyltransferase [Rhodococcus equi 103S] Length = 371 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 55/315 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A +TAD+ + A+ + T G ++ + + +D Sbjct: 54 SHLGKALVAGAGAADFVNATLTADLGRIGPGQAQYTLCCTETGGVVDDLIAYYVADDEVF 113 Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NV-----------IIEIQPI 97 L + + ++ +L Y + + I I I Sbjct: 114 LVPNAANTADVVARLQAGAPEGIEITDQHRDYAVFAVQGPKAGEVLAALDLRGDIAIADI 173 Query: 98 NGVVLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK---T 143 + + + H T + R++ A+ L ++ Sbjct: 174 DYMGFADMDWHGVPVRVCRSGYTGERGFELLPRWADAEALFRALIDAVRAQGGEVAGLGA 233 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G + I P A I K + G++ ++ + R+ Sbjct: 234 RDTLRTEAGYPLHGHELSLD-ISPLQARCGW--AIGWAKPQFWGRDALTAEKAAGPARRM 290 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 I + G + D IG K +A+A +D + G ++V Sbjct: 291 WGIKALDRGVLRQGQTVSKDGASIGETTSGTFSPTLKVGIALALLDTASG-VAAGDEISV 349 Query: 260 H----GVRVKASFPH 270 +R + P Sbjct: 350 DVRGRSLRCEVVTPP 364 >gi|255692813|ref|ZP_05416488.1| glycine cleavage system T protein [Bacteroides finegoldii DSM 17565] gi|260621442|gb|EEX44313.1| glycine cleavage system T protein [Bacteroides finegoldii DSM 17565] Length = 361 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 104/304 (34%), Gaps = 54/304 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71 V G A+ FLQ + + +V L + + +G I+ L+ + E + ++L ++ Sbjct: 56 VKGPKALAFLQKVTSNNVAVLTPGKIQYTCFPNDKGGIVDDLLVYQYEPEKYMLVVNAAN 115 Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ ++ D + ++ I+ +Q + + L+ +TF F Sbjct: 116 IEKDWDWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTDIDLASIPYYTFKVGKF 175 Query: 116 IDER--------------------FSIADVLLHRTWGHNEKI---ASDIKTYHELRINHG 152 E ++AD + + E+ + LR+ G Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPNVADTIWKAVFEAGEEFDIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTD 211 D T P +A + + +G +I + ++ + + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWI--TKFIEGKEFINRPMLEKQKAEGVTRKLVGFEMVDR 292 Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P G ++ +D +IG + + + + + + + V G ++ Sbjct: 293 GIPRHGYELVNSDGEKIGIVTSGTMSPTRKIGIGMGYVKPEYSKAGTE--ICIDVRGRKL 350 Query: 265 KASF 268 KA Sbjct: 351 KAVV 354 >gi|158422999|ref|YP_001524291.1| aminomethyltransferase [Azorhizobium caulinodans ORS 571] gi|158329888|dbj|BAF87373.1| aminomethyltransferase [Azorhizobium caulinodans ORS 571] Length = 789 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 106/315 (33%), Gaps = 73/315 (23%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +++ G A FLQ ++ D+ L + + G ++ + ++ ++ F Sbjct: 460 LSALRKLEIVGPDAETFLQGLLPRDIRKLSVGQIFYTPLCYAHGGMVDDGTLFRLGDNNF 519 Query: 66 -ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNSS 114 + D + + ++ + R V ++ ++ T Sbjct: 520 RWIGGDDASLLWIEEQAAKFGGR--VSLKTASGEIHNVALQGPRSRETLRKILWTAPGRP 577 Query: 115 FIDE----RFSIA--------DVLLHRTWGHNE-------KIASDIKTYHEL-------- 147 +DE R +I VL+ RT E + + L Sbjct: 578 TLDELGLFRLTIGRIGGYDGIPVLVSRTGYTGELGYEVFCHPKDAPQVWDALMEAGAEFG 637 Query: 148 ------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQEV 190 RI G+V DF ST P +A GI + YIG+ Sbjct: 638 IRPFGFEALDMVRIEAGLVFGGHDF-DSTTDPFEA------GIGFTVPTKKEEDYIGKAA 690 Query: 191 VSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARID 245 + R R + + + ++P G P+ ++G + + +A+AR+D Sbjct: 691 LQR--RREHPAHKLVGLEVQGGEIPAHGDPLFIGRAQVGLVTSATRSPLLARTIALARVD 748 Query: 246 KVDHAIKKGMALTVH 260 V HA+ G+ L + Sbjct: 749 -VAHAL-PGLTLEIG 761 >gi|320008451|gb|ADW03301.1| glycine cleavage system T protein [Streptomyces flavogriseus ATCC 33331] Length = 371 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 56/296 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A++ + T+ AR + I+ G IL ++ ++ + Sbjct: 52 LSHMGEITVTGPQAAAFLSYALVGN-IATVGEGRARYTMIVAEDGGILDDLIVYRLADTE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSNVI----------IEIQPING 99 F++ + ++D L Y L + V + ++G Sbjct: 111 FMVVANAGNAQLVLDTLTTRAGGFDAEVRDDRDAYALLA-VQGPDSPAVLKSVTDADLDG 169 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIK 142 + T + + R + E I + Sbjct: 170 LKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWKALTEAGAPYGLIPCGLS 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII- 200 LR+ G+ + + + P DA + + + K G ++G+E +S R Sbjct: 230 CRDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGREALSAAAERAETT 286 Query: 201 --RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 RK ++ +P +G P++ +G + L A+A +D A Sbjct: 287 PPRKLVGLVAEGRRVPRAGYPVVAGGNVVGEVTSGAPSPTLGKPIAMAYVDAAYAA 342 >gi|311278174|ref|YP_003940405.1| glycine cleavage system T protein [Enterobacter cloacae SCF1] gi|308747369|gb|ADO47121.1| glycine cleavage system T protein [Enterobacter cloacae SCF1] Length = 364 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 98/308 (31%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKPGKALYSGMLNASGGVIDDLIVYFLTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + + I E + + + Q + F D + S + Sbjct: 110 RLVVNSATREKDLAWITRHAEPYGIEIVERDDLALIAVQGPQAQAKAAMLFSDAQRSAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 170 GMKPFFGVQTGDLFVATTGYTGEAGYEIAMPNEKAADFWRALVEAGGQPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQHRNIIRKRPMII 207 G+ + +I P A M + +IG+EV R + M Sbjct: 230 EAGMNLYGQEM-DESISPLAANMGWTIAWEPAERNFIGREVLETQRQHGTEQLVGLVMTE 288 Query: 208 TGT--DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 G +LP + + E GT +G ++A+AR+ + + Sbjct: 289 KGVLRGELPVRFTDAQGNQKEGIITSGTFSPTLG-YSIALARV-PAGIGETAVVQIRNRE 346 Query: 262 VRVKASFP 269 + VK + P Sbjct: 347 MPVKVTKP 354 >gi|146284376|ref|YP_001174529.1| glycine cleavage system aminomethyltransferase T [Pseudomonas stutzeri A1501] gi|145572581|gb|ABP81687.1| glycine-cleavage system protein T1 [Pseudomonas stutzeri A1501] Length = 360 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 42/303 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A SA+L +G ++ ++ + + Sbjct: 50 SHMTVVDVAGDQASAYLQHLLANDVARLKSPGRALYSAMLNERGGVIDDLIVYLT-DWGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ S RD + + V I +P ++ + + + Sbjct: 109 RLVVNASTRDKDLAWMQAQAADFAVEINERPQLAMLAIQGPHARTRTAELVSQARATLIQ 168 Query: 120 -------FSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIV------------ 154 + D + RT E A + + GI Sbjct: 169 ELKPFQGLAEGDWFIGRTGYTGEDGLEIILPAEQAPDFLSELVGAGIPPIGLGARDTLRL 228 Query: 155 DPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + + + P A M + ++G+ + + + + K ++ Sbjct: 229 EAGLNLYGQDMTEEVSPLAANMGWTVAWEPAERDFVGRAALEQQRAEGDLPKLVGLVLEE 288 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + + + + + G + K++A+AR+ A + + + V+ Sbjct: 289 RGVLRAHQVVRVNGVGDGEITSGSFSPTLGKSIALARV-PAGTAERAEVEIRGKWYPVRV 347 Query: 267 SFP 269 P Sbjct: 348 VQP 350 >gi|325961659|ref|YP_004239565.1| sarcosine oxidase subunit alpha family, heterotetrameric form [Arthrobacter phenanthrenivorans Sphe3] gi|323467746|gb|ADX71431.1| sarcosine oxidase, alpha subunit family, heterotetrameric form [Arthrobacter phenanthrenivorans Sphe3] Length = 981 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 89/282 (31%), Gaps = 64/282 (22%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I++ GK A FL I T L AR + TP G I + ++ Sbjct: 637 MDATTL---GKIEIRGKDAGEFLNRIYTNAFKKLAPGSARYGVMCTPDGMIFDDGVTLRL 693 Query: 61 EEDTFILEIDRSKRDSLIDKL-------------------------------LFYKLRSN 89 +E+T+ + ++D L L + Sbjct: 694 DEETYFMTTTTGGAAKVLDWLEEWLQTEWPELDVHCTSVTEQWSTIAVVGPKSREVL-AK 752 Query: 90 VIIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGH 133 V E+ G+ ++ + S R S + L + TW Sbjct: 753 VAPELAANGGLEAEAFPFMTFRETTLASGVRARVCRISFSGELAYEINVPSWYGLNTWEA 812 Query: 134 NEKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 ++ +T H LR G D T+ P DA M+ + +S K +I Sbjct: 813 VAAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FI 868 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226 G+ SR + RK + + D P GS ++ Sbjct: 869 GKRSYSRTDAQREDRKHLVSVLPVDGTLRLPEGSQLVEKGRS 910 >gi|284165331|ref|YP_003403610.1| glycine cleavage system protein T [Haloterrigena turkmenica DSM 5511] gi|284014986|gb|ADB60937.1| glycine cleavage system T protein [Haloterrigena turkmenica DSM 5511] Length = 374 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 61/319 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60 S+ I G A +Q + T DV L ++ +AI G I+ ++ ++ Sbjct: 51 SHMGQIHATGPDATELMQRLTTNDVTRLAVGDSQYAAITDEDGTIIDDTVVYRLPNETDD 110 Query: 61 -------EEDTFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT 109 E T++ + +S ++ + ++ L + V + + Sbjct: 111 GARADEDGEPTYLFVPNAGTDESTHERWITHRNEWDLEATVDNRTDEYAMFAVQGPEAAD 170 Query: 110 FSNSSFID-----ERFSI-------ADVLLHRT--------------------WGHNEKI 137 + + + +RF D + RT W + Sbjct: 171 LVDDATAESITALDRFEAQYATVDGVDCWVARTGYTGEDGFELIVPWSEAEHVWSLFDCQ 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + LRI G++ DF + P++A + + ++G++ ++ ++ Sbjct: 231 PCGLGARDTLRIEAGLLLAGQDFDHDSDPRTPYEAGIGFTVALETE---FVGRDALAELE 287 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVD 248 I K +P G I TD IGT+ L ++ + Sbjct: 288 REGIEEKLVGFQLIDRGVPRHGYDITNTDSRVIGTVTSGTMSPSLEQPIGLGYVPVEYAE 347 Query: 249 HAIKKGMALTVHGVRVKAS 267 + + + + Sbjct: 348 PGTTLQVVVRGQSKKARVE 366 >gi|254690929|ref|ZP_05154183.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 6 str. 870] gi|260756518|ref|ZP_05868866.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 6 str. 870] gi|260676626|gb|EEX63447.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 6 str. 870] Length = 367 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EKI +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKILADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|149196628|ref|ZP_01873682.1| Glycine cleavage system T protein [Lentisphaera araneosa HTCC2155] gi|149140308|gb|EDM28707.1| Glycine cleavage system T protein [Lentisphaera araneosa HTCC2155] Length = 358 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 41/272 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ +I+ ++ + + +L G + ++ K ED Sbjct: 52 SHMGQFFVSGPDASRFVNYMISNNLDKIEGGRGLYTGLLYENGTFVDDIIVYKKAEDNIF 111 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116 + ++ + D L +KL + ++ + + + Q N F Sbjct: 112 MVVNAANVDKDFAWLSEKLKESNFDAQIVNRSDEYSLLAVQGPQAPEKLNQLFPGLYDQL 171 Query: 117 ------DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPS 163 D F+ L+ RT E K A + + L I G+ S Sbjct: 172 KTFGHCDIGFAGESGLMCRTGYTGEVGVELIVKNAVAGELFDSL-IEIGVKACGLGSRDS 230 Query: 164 -------TIFPHDALMDLLNGI--------SLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 +++ H+ D N + L K +IG+E + +I+ RK Sbjct: 231 LRLEKGFSLYGHEIN-DQTNALEAGLGWVCDLNKVNFIGKEALEKIKAEGTSRKLIGFKA 289 Query: 209 GTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239 +P G +L ++ EIG + KAL Sbjct: 290 NVRPIPRDGDTLLDSEGNEIGFVTSGTMSKAL 321 >gi|154251144|ref|YP_001411968.1| glycine cleavage system T protein [Parvibaculum lavamentivorans DS-1] gi|154155094|gb|ABS62311.1| glycine cleavage system T protein [Parvibaculum lavamentivorans DS-1] Length = 380 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 49/287 (17%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDRSKRDSLIDKL--- 81 ++ D+L L R + +L +G I ++++ +D L ++ + +D+ + Sbjct: 82 LVPGDILGLEPLAIRYTLLLNDKGGIRDDLMVTRTAKDGMLFLVVNAACKDADFAHIAAN 141 Query: 82 -----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--------------------- 115 +L +I +Q + + F Sbjct: 142 LPKGIELRRLEDRALIALQGPEAAAVFARLAPGAATQDFMTGVEMTVAGIPCLVSRSGYT 201 Query: 116 ------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 I A L + E + LR+ G+ D T P + Sbjct: 202 GEDGYEISVPDGEAVALTKKLLAEPEVKPIGLGARDSLRLEAGLCLYGHDI-DETTTPVE 260 Query: 170 ALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDI 225 + IS + G + G +++ + RKR ++ G+ I Sbjct: 261 GALTWT--ISKRRREEGNFPGAKIILDQVANGVTRKRVGLLPEGKAPAREGTEITDKSGR 318 Query: 226 EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 +IG + V G A+ + + G K Sbjct: 319 KIGVVTSGGYGPSVGGPIAMGYVETSHAKSGTDIELMVRGKGRPAKV 365 >gi|306845754|ref|ZP_07478323.1| glycine cleavage system T protein [Brucella sp. BO1] gi|306274075|gb|EFM55902.1| glycine cleavage system T protein [Brucella sp. BO1] Length = 367 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTVLKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPVG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|186470753|ref|YP_001862071.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] gi|184197062|gb|ACC75025.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] Length = 370 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 45/264 (17%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 ++V G A + +I DV + AR +A + +G + ++ F L Sbjct: 57 IVRVSGPDAAAVIDSICAVDVSRMKPGTARLAAEVDERGGVCDDLMVIYDAPQHFRLSHG 116 Query: 71 RSKRDSLIDK----------------------------LLFY------KL--RSNVIIEI 94 SL+++ L + KL ++V ++ Sbjct: 117 GGTTQSLLERAAHKRNVEWRQDFDVHMLSLQGPRSTDILQPHIGIELNKLPYFAHVETQL 176 Query: 95 QPINGVVLSWN--QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 N +V E F S + ++ D +L H + + + RI Sbjct: 177 FGRNIIVSRGGYSGEQGFEVSCAAADAVALWDGILDAGKPHG-AVPASWMSLEIARIEAA 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR-KRPMIITGT 210 ++ D P + +D + + L K G Y+G+E + + R R K+ ++ Sbjct: 236 LLFYPFDMPEGDTTPWELNLDWM--VDLDKAGDYVGKE--ALLAARGKERVKQAGVVVRH 291 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234 D +GSPI D ++G + + Sbjct: 292 DAAVSAGSPIYIGDEQVGVVTSAI 315 >gi|319407014|emb|CBI80651.1| glycine cleavage system T protein [Bartonella sp. 1-1C] Length = 373 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 92/283 (32%), Gaps = 49/283 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A FL + D L +R + +L+ Q IL +++++++ F+ Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDAFLLQKGQSRYNYLLSEQAGILDDLILTRLDKYRFM 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------ 120 L ++ + +L R+ V + Q + + + + S F D Sbjct: 122 LVVNAGNAQADFAELQK---RA-VDFDCQIVALERVFLALQGPQAASVFADAGLLGNELL 177 Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 S A L+ + + LR+ Sbjct: 178 FMQGFEPYQGWFVTRSGYTGEDGFEIALPESQARSLVEKLLDDYRVEWIGLAARDSLRLE 237 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D P T P +A + S+ K + G E R R R R + Sbjct: 238 AGLCLHGNDITPDTT-PIEAALTWAVSKSVREKAKFYGAEAFLRAYQRGPSRCRVGLKPQ 296 Query: 210 TDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245 +G+ +L D +IG + G A+ ID Sbjct: 297 GRQPVRAGAVLLDDKGKQIGIVTSGGFGPSFNGPVAMGYVPID 339 >gi|160889051|ref|ZP_02070054.1| hypothetical protein BACUNI_01471 [Bacteroides uniformis ATCC 8492] gi|270293834|ref|ZP_06200036.1| glycine cleavage system T protein [Bacteroides sp. D20] gi|317479329|ref|ZP_07938464.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36] gi|156861518|gb|EDO54949.1| hypothetical protein BACUNI_01471 [Bacteroides uniformis ATCC 8492] gi|270275301|gb|EFA21161.1| glycine cleavage system T protein [Bacteroides sp. D20] gi|316904617|gb|EFV26436.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36] Length = 362 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + ++ L + + G I+ L+ E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + + ++ I +Q + + LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLTSINLSDLPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E+ I + G E + +K + LR+ G Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + ++ + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293 Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + + D I IG + + R + + + + ++ Sbjct: 294 IPRHGYELYSTDGIAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|319405443|emb|CBI79062.1| glycine cleavage system T protein [Bartonella sp. AR 15-3] Length = 373 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 41/279 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A FL + D L +R + +L Q IL ++++++E F+ Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDASLLQKGQSRYNYLLNEQAGILDDLILTRLDEYRFV 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--------VIIEIQPINGVVLSWN------------- 105 L ++ +L + V++ +Q + + Sbjct: 122 LVVNAGNAQVDFSELKKRAVGFKCQIITLERVLLALQGPQAASVMADVGLPGNELLFMQG 181 Query: 106 ----QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIV 154 Q+ + S + E + ++ EK+ D + LR+ G+ Sbjct: 182 FEPHQDWFLTRSGYTGEDGFEIALPENQARSLVEKLLDDCRIEWVGLAARDSLRLEAGLC 241 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P T P +A + S+ K + G E R + R R + Sbjct: 242 LHGNDITPDTT-PIEAGLTWAVSKSVREKAKFYGAEAFLRAYQKGPSRCRVGLKPQGRQP 300 Query: 214 PPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245 +G+ +L + +IG + G A+ ID Sbjct: 301 VRAGAVLLDNKGTQIGIVTSGGFGPSFNGPVAMGYVPID 339 >gi|17988904|ref|NP_541537.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 1 str. 16M] gi|225686498|ref|YP_002734470.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis ATCC 23457] gi|256043607|ref|ZP_05446534.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 1 str. Rev.1] gi|256111356|ref|ZP_05452382.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 3 str. Ether] gi|256262362|ref|ZP_05464894.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|260564798|ref|ZP_05835283.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|265990025|ref|ZP_06102582.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 1 str. Rev.1] gi|265992864|ref|ZP_06105421.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 3 str. Ether] gi|17984732|gb|AAL53801.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M] gi|225642603|gb|ACO02516.1| glycine cleavage system T protein [Brucella melitensis ATCC 23457] gi|260152441|gb|EEW87534.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M] gi|262763734|gb|EEZ09766.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 3 str. Ether] gi|263000694|gb|EEZ13384.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis bv. 1 str. Rev.1] gi|263092093|gb|EEZ16390.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9] gi|326410880|gb|ADZ67944.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis M28] gi|326554171|gb|ADZ88810.1| glycine cleavage system aminomethyltransferase T [Brucella melitensis M5-90] Length = 367 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQSWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|21223829|ref|NP_629608.1| glycine cleavage system aminomethyltransferase T [Streptomyces coelicolor A3(2)] gi|256785076|ref|ZP_05523507.1| glycine cleavage system aminomethyltransferase T [Streptomyces lividans TK24] gi|289768969|ref|ZP_06528347.1| glycine cleavage system T protein [Streptomyces lividans TK24] gi|11132177|sp|O86567|GCST_STRCO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|3402239|emb|CAA20175.1| aminomethyltransferase [Streptomyces coelicolor A3(2)] gi|289699168|gb|EFD66597.1| glycine cleavage system T protein [Streptomyces lividans TK24] Length = 372 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 97/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + T+ AR + I G IL ++ ++EE Sbjct: 53 LSHMGEITVTGPQAAELLNFALVGN-IGTVKPGRARYTMICREDGGILDDLIVYRLEEAE 111 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100 +++ + S ++D L Y L + + ++G+ Sbjct: 112 YMVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALLAVQGPESPGILASLTDADLDGL 171 Query: 101 VLSWNQEHTFSNSSFIDERFSIAD--------------VLLHRTWGHNEK---IASDIKT 143 T + + R L G E I + Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQALTGAGEAAGLIPCGLSC 231 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR- 201 LR+ G+ + + + P DA + + + K G ++G+ ++ R R Sbjct: 232 RDTLRLEAGMPLYGNELSTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTEAAERAASRP 288 Query: 202 -KRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 + + + +P SG ++ IG + + +A+A +D A Sbjct: 289 PRVLVGLVAEGRRVPRSGYRVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDPAHAA 343 >gi|315182633|gb|ADT89546.1| glycine cleavage system T protein [Vibrio furnissii NCTC 11218] Length = 381 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 103/293 (35%), Gaps = 56/293 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A L+ ++ DV+ L R + QG IL +++ + D Sbjct: 63 SHMGQLRLHGEGAAAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVANLG-DHLF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117 + ++ + +D I+ L + L S V +EI ++ + ++ F+D Sbjct: 122 VVVNAACKDQDINHLQAH-LPSGVELEIIDDRALLALQGPKAAEVLARLQPAVADMLFMD 180 Query: 118 -------------ERFSIADVLLHRT---WGHNEKIASDIKTYHE-----------LRIN 150 R + E +A + + E LR+ Sbjct: 181 IQQVQIDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSLRLE 240 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202 G+ D T P +A + G +G + G +++ S+I +++ RK Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRTGGA--REGGFPGADIILSQIATKDVSRK 297 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVD 248 R ++ T G+ + D +IG + ++A R D Sbjct: 298 RVGLVGQTKAPVREGTELFDADGAKIGLVTSGTAGPTAGVPVSMAYVRADLAA 350 >gi|149371410|ref|ZP_01890896.1| aminomethyltransferase [unidentified eubacterium SCB49] gi|149355548|gb|EDM44107.1| aminomethyltransferase [unidentified eubacterium SCB49] Length = 380 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 62/320 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G +A+ +Q + T D L A+ S G ++ +I ++ + ++ Sbjct: 68 SHMGEFLVTGPNALALIQHVTTNDASKLVDGQAQYSCFPNEDGGVVDDLIIYRLAAEKYL 127 Query: 67 LEIDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 L ++ S + + + +LR ++ ++ + + S E S Sbjct: 128 LVVNASNIEKDWKHINKHNHVGAELR-----DLSEDYSLLAIQGPKAIEAMQSLTSEDLS 182 Query: 122 I----------------------------------ADVLLHRTWGHNEKIASD------- 140 + + + W +D Sbjct: 183 AIKFYTFKVSDFAGIDNVIISATGYTGSGGFEIYCKNEEVAQVWEKVLAAGADFGIKPIG 242 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ G D T P +A + + TK ++ E + + + + Sbjct: 243 LAARDTLRLEMGYCLYGNDI-DDTTSPLEAGLGWI--TKFTKD-FVNSENLKKQKESGVE 298 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253 R +P G I+ D +IG + L + K Sbjct: 299 RSLVAFELDERGIPRQGYDIVDNDGNKIGNVTSGTMSPSMGTGIGLGYVPVALKSVGSKI 358 Query: 254 GMALTVHGVRVKASFPHWYK 273 + + V +YK Sbjct: 359 NIQIRKKAVPATVVKLPFYK 378 >gi|148558325|ref|YP_001257682.1| glycine cleavage system aminomethyltransferase T [Brucella ovis ATCC 25840] gi|148369610|gb|ABQ62482.1| glycine cleavage system T protein [Brucella ovis ATCC 25840] Length = 367 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + T LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLATRDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|288940652|ref|YP_003442892.1| glycine cleavage system T protein [Allochromatium vinosum DSM 180] gi|288896024|gb|ADC61860.1| glycine cleavage system T protein [Allochromatium vinosum DSM 180] Length = 364 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 100/303 (33%), Gaps = 48/303 (15%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS-KIEEDTFILEI 69 + + G A FL+ ++ DV L A S +L G ++ ++ + + L + Sbjct: 55 VDIEGPDAQAFLRRLLANDVAKLKTVGKALYSCMLNDSGGVVDDLIVYLRGPAGHYRLVV 114 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERFSIA- 123 + D + L ++ +V I + ++ + ++ D +A Sbjct: 115 NAGTADKDLTWLESHRTGFDVEIRRRDDLAMIAVQGPQARELTATCLPREMADSALELAP 174 Query: 124 -------DVLLHRTWGHNE-------KIASDIKTY----------------HELRINHGI 153 + RT E + + LR+ G+ Sbjct: 175 FHATECGGWFIARTGYTGEDGFEILLPADHAVDLWSVLLDAGVRPCGLGARDTLRLEAGM 234 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D + P ++ ++ + +IG+ + ++ R+ ++ + Sbjct: 235 NLYGQDMG-EDVGPLESGLEWTIAWEPVERDFIGRAALDELRASPERREFVGLLLTGRGV 293 Query: 214 PPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG--VRVKAS 267 + +L++ E+G + ++++A+AR V + + + + G V + Sbjct: 294 IRAHQTVLSNGREVGEITSGGFSPTLQRSIALAR---VAPGLGETCEVEIRGKPVPARIV 350 Query: 268 FPH 270 P Sbjct: 351 KPP 353 >gi|148550301|ref|YP_001270403.1| glycine cleavage system aminomethyltransferase T [Pseudomonas putida F1] gi|148514359|gb|ABQ81219.1| aminomethyltransferase [Pseudomonas putida F1] Length = 360 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E + Sbjct: 50 SHMTVIDVDGTDATVWLQRLLANDVARLDDTGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L + + R ++D L + +V +++P ++ ++ + A Sbjct: 109 RLVNNAATRAKVLDWLQSQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164 Query: 126 LLHRTWGHNEKIASDIK 142 L R E +A Sbjct: 165 ALIRELRPFEGVADGDW 181 >gi|226944684|ref|YP_002799757.1| glycine cleavage system T protein [Azotobacter vinelandii DJ] gi|226719611|gb|ACO78782.1| glycine cleavage system T protein [Azotobacter vinelandii DJ] Length = 374 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 47/270 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L+ ++ D++ LP R + G IL +++ + ++ Sbjct: 55 SHMGQILLRGADAGAALETLVPVDIVELPVGQQRYALFTDDNGGILDDLMVANLGDERLF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 L ++ + ++ + L + S ++ +Q + V + + +F Sbjct: 115 LVVNAACKEQDLAHLKTHIGARCQIESLFESRALLALQGLRAVDVLARLAPEVAQMTFMR 174 Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I AD L E + LR+ Sbjct: 175 IAEIELLGIPCIVSRSGYTGEDGFEISVPVEHADKLARALLAEPEVQPIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ D +T P +A + G G + G + Q + +R Sbjct: 235 AGLCLYGHDMSSATT-PVEASLLWAISKARREGGA--RAGGFPGAARIFAQQQEGVACRR 291 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ G+ I+ IG + Sbjct: 292 VGLLPQERTPVREGTEIVDAQGAPIGKVTS 321 >gi|183983247|ref|YP_001851538.1| aminomethyltransferase GcvT [Mycobacterium marinum M] gi|183176573|gb|ACC41683.1| aminomethyltransferase GcvT [Mycobacterium marinum M] Length = 367 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 48/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIF 114 Query: 67 LEIDRSKRDSLIDK--------LLFYKL-RSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVAALQAAAPSGLTITDLHRSYAVLAVQGPRSTEVLAALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----RINHGIVDPNTD---------FL 161 D ++ V + RT E + + + + + + Sbjct: 175 ADSSYNGVSVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVAEVGGEPAGLGARDTLR 234 Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITG 209 +P H+ +D+ I K + G+E + + R+ R + + G Sbjct: 235 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFFGREALLAEKAAG-PRRLLRGLRMVG 293 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH----G 261 L P G +L +G +A+A ID D ++ G +TV Sbjct: 294 RGVLRP-GLTVLNGSTPVGVTTSGTFSPTLQIGIALALID-TDAGVEDGQQITVDVRGRA 351 Query: 262 VRVKASFPH 270 V + P Sbjct: 352 VECEVVRPP 360 >gi|319408981|emb|CBI82640.1| glycine cleavage system T protein [Bartonella schoenbuchensis R1] Length = 373 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 101/305 (33%), Gaps = 47/305 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FL + D L + +R + +L Q IL +++++E FI Sbjct: 62 SHMKLIVVEGPQSAEFLSYALPVDAALLKERQSRYNYLLNEQAGILDDLILTRLENHRFI 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + + +L R+ V++ +Q + + + + F Sbjct: 122 LVVNAGNAQADLAELKK---RATNFDCHVSALERVLLALQGPQAASVIADADLPGNELLF 178 Query: 116 IDERFSIADVLLHRTW-----------------GHNEKIASD-------IKTYHELRINH 151 + D + R+ EK+ SD + LR+ Sbjct: 179 MQGFEPRKDWFVTRSGYTGEDGFEIALPEDQAHELAEKLLSDCRVEWIGLAARDSLRLEA 238 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D S I P +A + ++ K + G + + +R R + T Sbjct: 239 GLCLHGNDIT-SDITPIEAALTWAVSKNVREKAAFYGAKAFLEAYEKGPLRCRVGLKPQT 297 Query: 211 DDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +G+ +L D +IG + G A+ +D + L + Sbjct: 298 RQPVRAGAVLLDDKGNQIGVVTSGSFGPSFNGPVAMGYVPVDWKAEGTEVFTELRGKKIA 357 Query: 264 VKASF 268 + Sbjct: 358 LSVHL 362 >gi|28900660|ref|NP_800315.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD 2210633] gi|260365535|ref|ZP_05778072.1| aminomethyltransferase [Vibrio parahaemolyticus K5030] gi|260877598|ref|ZP_05889953.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034] gi|260895389|ref|ZP_05903885.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466] gi|260901661|ref|ZP_05910056.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037] gi|28809040|dbj|BAC62148.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD 2210633] gi|308085271|gb|EFO34966.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466] gi|308090733|gb|EFO40428.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034] gi|308108852|gb|EFO46392.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037] gi|308114318|gb|EFO51858.1| aminomethyltransferase [Vibrio parahaemolyticus K5030] Length = 372 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 54 SHMGQLRLIGEGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118 + ++ + ++ I L + L S V +E+ ++ + + F E Sbjct: 113 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFAPEVADMLFMD 171 Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 172 IRKVEILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G + D +IG + ++ R D + + Sbjct: 292 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKMLPMTVEK 361 >gi|212710027|ref|ZP_03318155.1| hypothetical protein PROVALCAL_01080 [Providencia alcalifaciens DSM 30120] gi|212687234|gb|EEB46762.1| hypothetical protein PROVALCAL_01080 [Providencia alcalifaciens DSM 30120] Length = 391 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 99/309 (32%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ +++D + Sbjct: 77 SHMTIVDLHGEGCRDFLRYLLANDIAKLTIKGRALYTGMLNASGGVIDDLIVYYLDDDFY 136 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFSIA 123 L ++ + RD I + + V I ++ ++ + S + E R +I Sbjct: 137 RLVVNSATRDKDIAWIEQHAKEYAVAITVRDDLALLAVQGPKAQDKVHSLLTEEQRAAIK 196 Query: 124 DVLL----------------------------------HRTWGHNEKIASDIKTYHELRI 149 D+ R + + LR+ Sbjct: 197 DMKPFYGVQTGDLFIATTGYTGEKGYEIAMPKQQVVEFWRKLLKAGVHPAGLGARDTLRL 256 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D +I P A M +IG+E + + + + + + I Sbjct: 257 EAGMNLYGQDM-DESISPLAANMGWTIAWEPQDRNFIGREALEKQRAQGSDK--LVGIVM 313 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + ++ E G L V +A+AR+ + + + Sbjct: 314 REKGILRAEQVVRFTDESGKLHEGVITSGSFSPTLGFSIALARV-PNGIKNQAIVEIRHR 372 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 373 EMPVEVVKP 381 >gi|330812480|ref|YP_004356942.1| glycine cleavage system T protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380588|gb|AEA71938.1| glycine cleavage system T protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 360 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A SA+L +G I+ +I ++ ED + Sbjct: 50 SHMTVIDVAGPQAKVWLQRLLANDVDRLQDTGSALYSAMLNERGGIVDDMIIYRV-EDGY 108 Query: 66 ILEIDRSKRDSLIDKLL 82 L + S RD + + Sbjct: 109 RLVFNASTRDQDLAWMQ 125 >gi|254449599|ref|ZP_05063036.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus 238] gi|198264005|gb|EDY88275.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus 238] Length = 812 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 102/320 (31%), Gaps = 68/320 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A FL V ++P + L +G I ++++ Sbjct: 487 MSSFGKIRVEGRDAEAFL-----NYVGGGDYSVPIGKIVYTQFLNNRGGIEADVTVTRLS 541 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102 E +++ + R L D++ + R + VI ++ GV+ Sbjct: 542 ETAYLVVTPAATR--LADQVWMERNRGDFNVVITDVTAGEGVLALMGPNARKLLQAVSPA 599 Query: 103 -SWNQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147 N + F + I+ R + L + ++ +T H+ Sbjct: 600 DFTNDVNPFGTAQDIEIGMGMARVHRVTYVGELGWEVYVSADQAGHVFETLHDAGKDFGL 659 Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 RI G D +A + + K +IG+E V Q Sbjct: 660 TLCGMHMMDTCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKKDKPDFIGREAVLEKQE 716 Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKV 247 + ++ +T + L PIL D +G L G L + + Sbjct: 717 TGLNKRMVQFKLTDPEPLLYHNEPILRDGELVGYLSSGAYGHTLGGAMGLGYVPCKGETA 776 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + A+ V G V+A Sbjct: 777 ADVLASSYAIDVMGTNVRAE 796 >gi|77461649|ref|YP_351156.1| glycine cleavage system aminomethyltransferase T [Pseudomonas fluorescens Pf0-1] gi|77385652|gb|ABA77165.1| aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas fluorescens Pf0-1] Length = 360 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L +G I+ ++ ++ ED + Sbjct: 50 SHMTVIDVTGPQAKAWLQHLLANDVERLHSPGRALYSTMLNERGGIVDDMIVYRL-EDGY 108 Query: 66 ILEIDRSKRDSLIDKLL 82 L ++ S RD + + Sbjct: 109 RLVVNASTRDQDLAWMQ 125 >gi|85704027|ref|ZP_01035130.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. 217] gi|85671347|gb|EAQ26205.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. 217] Length = 815 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 99/319 (31%), Gaps = 66/319 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ ++V G A FL V +++P + L +G I ++++ Sbjct: 490 MSSFGKLRVEGAGAEAFL-----NHVCGAEMSVPVGRIVYTQFLNAKGGIEADVTVTRLA 544 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW---------------- 104 E +++ + R + L + V+I ++ GV+ Sbjct: 545 ETAYLVVTPAATRLADETWLRRHVGDHAVVITDVTAGEGVLAVMGPKARDLMRAVSPDDF 604 Query: 105 -NQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147 N H F + I+ R S L + + + H Sbjct: 605 SNAAHPFGQARVIEIGMGVARAHRVSYVGELGWEIYVSADMCGHVFEVLHAAGADHGLKL 664 Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI D +A + ++ K +IG++ V + Sbjct: 665 CGMHAMDSCRIEKAFRHFGHDITCEDHV-LEAGLGF--AVATGKADFIGRDAVL-AKREA 720 Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVD 248 + +R + TD P P+L D +G L G + + + V+ Sbjct: 721 GLERRLVQFRLTDPEPMLYHNEPLLRDGEIVGYLSSGAYGHHLGGAMGMGYVPCKGESVE 780 Query: 249 HAIKKGMALTVHGVRVKAS 267 + + V GVRVKA Sbjct: 781 QVLASSYEVDVAGVRVKAE 799 >gi|302820605|ref|XP_002991969.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii] gi|300140211|gb|EFJ06937.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii] Length = 409 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 46/276 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK AIPFL+ ++ D+ L SA +G + +I+K++ Sbjct: 81 SLFDVSHMCGLTLKGKDAIPFLETLVVGDIAGLSDGSCTLSAFTNEKGGTIDDTVITKVK 140 Query: 62 EDTFILEIDRSKRDSLI----DKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFI 116 + L ++ RD + L YK + V + ++ + + Sbjct: 141 DGHVYLVVNAGCRDKDLAHIGKHLEAYKSKGKDVSSHVHDERSLLALQGPLAASTLQHLV 200 Query: 117 DERFSI-------------ADVLLHRTWGHNEK--------------------------I 137 E S A+ + RT E + Sbjct: 201 KEDLSKVYFGNFRILSVNGAECFITRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIL 260 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + + LR+ G+ D +T + + +G ++G +V+ + Sbjct: 261 LTGLGARDSLRLEAGLCLYGHDMDDNTSVVEAGVAWTIGKRRRAEGGFLGADVILKQLKE 320 Query: 198 NIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 + RKR +I+ + PI D IG + Sbjct: 321 GVSRKRVGMIS-EGAPARAHCPIYNASDEVIGEVTS 355 >gi|23500464|ref|NP_699904.1| glycine cleavage system aminomethyltransferase T [Brucella suis 1330] gi|161620785|ref|YP_001594671.1| glycine cleavage system aminomethyltransferase T [Brucella canis ATCC 23365] gi|163844858|ref|YP_001622513.1| glycine cleavage system aminomethyltransferase T [Brucella suis ATCC 23445] gi|225629204|ref|ZP_03787237.1| glycine cleavage system T protein [Brucella ceti str. Cudo] gi|254695763|ref|ZP_05157591.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 3 str. Tulya] gi|254699946|ref|ZP_05161774.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 5 str. 513] gi|254703068|ref|ZP_05164896.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 3 str. 686] gi|254705788|ref|ZP_05167616.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M163/99/10] gi|254711020|ref|ZP_05172831.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis B2/94] gi|256015491|ref|YP_003105500.1| glycine cleavage system T protein [Brucella microti CCM 4915] gi|256029402|ref|ZP_05443016.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M292/94/1] gi|256157595|ref|ZP_05455513.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M490/95/1] gi|256253430|ref|ZP_05458966.1| glycine cleavage system aminomethyltransferase T [Brucella ceti B1/94] gi|256256114|ref|ZP_05461650.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 9 str. C68] gi|260167509|ref|ZP_05754320.1| glycine cleavage system aminomethyltransferase T [Brucella sp. F5/99] gi|260568003|ref|ZP_05838472.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260882338|ref|ZP_05893952.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 9 str. C68] gi|261216172|ref|ZP_05930453.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 3 str. Tulya] gi|261220553|ref|ZP_05934834.1| glycine cleavage system aminomethyltransferase T [Brucella ceti B1/94] gi|261313212|ref|ZP_05952409.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M163/99/10] gi|261318605|ref|ZP_05957802.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis B2/94] gi|261750424|ref|ZP_05994133.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 5 str. 513] gi|261753682|ref|ZP_05997391.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 3 str. 686] gi|261756924|ref|ZP_06000633.1| glycine cleavage T protein [Brucella sp. F5/99] gi|265986406|ref|ZP_06098963.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M292/94/1] gi|265996100|ref|ZP_06108657.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M490/95/1] gi|294853496|ref|ZP_06794168.1| glycine cleavage system T protein [Brucella sp. NVSL 07-0026] gi|297249472|ref|ZP_06933173.1| glycine cleavage system T protein [Brucella abortus bv. 5 str. B3196] gi|23464091|gb|AAN33909.1| glycine cleavage system T protein [Brucella suis 1330] gi|161337596|gb|ABX63900.1| glycine cleavage system T protein [Brucella canis ATCC 23365] gi|163675581|gb|ABY39691.1| glycine cleavage system T protein [Brucella suis ATCC 23445] gi|225615700|gb|EEH12749.1| glycine cleavage system T protein [Brucella ceti str. Cudo] gi|255998151|gb|ACU49838.1| glycine cleavage system T protein [Brucella microti CCM 4915] gi|260154668|gb|EEW89749.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40] gi|260871866|gb|EEX78935.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 9 str. C68] gi|260917779|gb|EEX84640.1| glycine cleavage system aminomethyltransferase T [Brucella abortus bv. 3 str. Tulya] gi|260919137|gb|EEX85790.1| glycine cleavage system aminomethyltransferase T [Brucella ceti B1/94] gi|261297828|gb|EEY01325.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis B2/94] gi|261302238|gb|EEY05735.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M163/99/10] gi|261736908|gb|EEY24904.1| glycine cleavage T protein [Brucella sp. F5/99] gi|261740177|gb|EEY28103.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 5 str. 513] gi|261743435|gb|EEY31361.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv. 3 str. 686] gi|262550397|gb|EEZ06558.1| glycine cleavage system aminomethyltransferase T [Brucella ceti M490/95/1] gi|264658603|gb|EEZ28864.1| glycine cleavage system aminomethyltransferase T [Brucella pinnipedialis M292/94/1] gi|294819151|gb|EFG36151.1| glycine cleavage system T protein [Brucella sp. NVSL 07-0026] gi|297173341|gb|EFH32705.1| glycine cleavage system T protein [Brucella abortus bv. 5 str. B3196] Length = 367 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|170728295|ref|YP_001762321.1| glycine cleavage system aminomethyltransferase T [Shewanella woodyi ATCC 51908] gi|238688662|sp|B1KG89|GCST_SHEWM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169813642|gb|ACA88226.1| glycine cleavage system T protein [Shewanella woodyi ATCC 51908] Length = 364 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 46/308 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVNGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLNDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 + ++ + R+ + + +V+I +P ++ +S + Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVITERPELAMIAVQGPNAKAKAASVFNTAQNAAVE 169 Query: 118 ---ERFSI-ADVLLHRTWGHNEKI--------ASDIKTY----------------HELRI 149 F + AD L T G+ + + + LR+ Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPDSEAEALWLALLEAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M + G+E ++ I+ + +I+ Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPADRNFNGREALAAIKAAGTEKMVGLIMEA 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHAIKKGMALTVHGV 262 + P S +D + G + ++A+AR+ + A + + V Sbjct: 289 KGVIRPGMSVFFSDSDGVEQQGTITSGTFSPTLGYSIAMARVPR-SIADTAEVEMRKKRV 347 Query: 263 RVKASFPH 270 VK P Sbjct: 348 PVKVIAPS 355 >gi|254481375|ref|ZP_05094620.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214038538|gb|EEB79200.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 406 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 78/277 (28%), Gaps = 66/277 (23%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L ++T DV + + T GK++ + ++ ED F L Sbjct: 76 RIKGPDAEAMLNRMVTRDVTSQAVDTVAYNIWCTDAGKLIDDGTLFRVSEDDFWL----C 131 Query: 73 KRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEH----------------------- 108 D D L + N+ I + L+ Sbjct: 132 AADPNFDWLQLSAVGFPNLEITDISEDLASLALQGPTSCALLKAMGFSGIENATPFSIMR 191 Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147 F R L + W A + +L Sbjct: 192 FPFGAGEITISRTGYTGDLGYELWVD---PADAELLWDQLFSVGQVYGIQPLGEDSLEMA 248 Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 RI G + P+ DF P + + + I+ KG + G+ +++ + Sbjct: 249 RIEAGFLAPDVDFHGSLHTVDRGHDHSPLELALGWI--INFKKGHFSGRAALAKEKAAGK 306 Query: 200 IRKRPMIITGTDDLPPSGSPILTD---DIEIGTLGVV 233 +R + + + P S + D IG + Sbjct: 307 -HRRLIKLDIEGNKPAENSILYCDKGCKKTIGYVTSA 342 >gi|218459268|ref|ZP_03499359.1| putative aminomethyltransferase (glycine cleavage) protein [Rhizobium etli Kim 5] Length = 31 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 20/31 (64%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV 31 M +V+L ++S + V G A FLQ +IT D+ Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDI 31 >gi|194292398|ref|YP_002008305.1| sarcosine deshydrogenase [Cupriavidus taiwanensis LMG 19424] gi|193226302|emb|CAQ72251.1| sarcosine deshydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 826 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 91/284 (32%), Gaps = 65/284 (22%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A LQ +++ DV +P +A+L +G ++++ +D +++ ++ Sbjct: 498 VKGADAEAVLQYVMSNDVA-VPPGQTVYTAMLNERGTYESDLTVTRLAQDQYLVVTGSAQ 556 Query: 74 RDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQ----------EHTFSNSSFI---- 116 + + ++ VI+++ V+ FSN F Sbjct: 557 TTRDFSYIER-LIPADQRCVIVDVTGQYAVLAVMGPRSRELLQRVSRADFSNEGFPFGSS 615 Query: 117 -----------DERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LR 148 R + L + E +T HE LR Sbjct: 616 RKIDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHEAGRTLGLVNAGYYAIESLR 675 Query: 149 INHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + G + P ++ P +A + L +G++ G++ + R++ +R Sbjct: 676 LEKGYRAWGRELSP-SVNPFEAGLSFACKLASGMNFR-----GRDALLRLRQAGAPTRRM 729 Query: 205 MIITGTDDLPP---SGSPILTDD-----IEIGTLGVVVGKKALA 240 +++T G +L +G+L L Sbjct: 730 VVVTVDGASDAMLWGGEAVLRTGPDGSVRAVGSLSSAAFGHTLG 773 >gi|83952345|ref|ZP_00961076.1| sarcosine oxidase, alpha subunit family protein [Roseovarius nubinhibens ISM] gi|83836018|gb|EAP75316.1| sarcosine oxidase, alpha subunit family protein [Roseovarius nubinhibens ISM] Length = 1003 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 100/324 (30%), Gaps = 67/324 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + G ++ ++++I+EDTF+ Sbjct: 670 STLGKIIVKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCNENGFLMDDGVVARIDEDTFL 729 Query: 67 LEIDRSKRDSLIDKL-----------LFYKLRSNVI-----IEIQPING--VVLSWNQEH 108 +S+ + Y +NV I + V+ +E Sbjct: 730 CHTTTGGAESIHGHMEDWLQCEWWDWKVY--TANVTEQYAQIAVVGPEARNVLAELTEED 787 Query: 109 --------------TFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 T R S + L W ++ + D+ Sbjct: 788 ISAETLPFMGWSDITLDGIPARAYRISFSGELSYEIAVAAGHGRALWDRLMEVGAKHDVM 847 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H +R G + + T+ P D M IS K Y+G+ R Sbjct: 848 PYGTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLNMQW--AISKKKEDYLGKRAQERSHMA 904 Query: 198 NIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARID 245 + R + + + T + P G+ + + V G + +A+ + Sbjct: 905 DPTRWKLVGLETLDGSVLPDGAYATEEGVNENGQRKVQGRVTSTYYSPTLDRGIAMGLLR 964 Query: 246 KVDHAIKKGMAL-TVHGVRVKASF 268 + + + V G V+A Sbjct: 965 HGPDRMGEVIDFPKVDGTVVQARV 988 >gi|262384270|ref|ZP_06077405.1| glycine cleavage system T protein [Bacteroides sp. 2_1_33B] gi|262293973|gb|EEY81906.1| glycine cleavage system T protein [Bacteroides sp. 2_1_33B] Length = 361 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94 K ++ +L L S V E Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175 Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152 V++S + ++ G E I S + LR+ G Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKSIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K + + + R + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G I + IG + + + + + + ++ + Sbjct: 294 IPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353 Query: 266 ASFPH 270 Sbjct: 354 VVKAP 358 >gi|330874302|gb|EGH08451.1| glycine cleavage system T protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 320 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 50/120 (41%), Gaps = 1/120 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A L+A++ D++ LP + R + G IL +++ + D + Sbjct: 72 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 131 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L ++ + ++ + L + L + IE +L+ + + + + + Sbjct: 132 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 190 >gi|260460026|ref|ZP_05808279.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259034237|gb|EEW35495.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 825 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 90/307 (29%), Gaps = 56/307 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + V G+ A L I +V + + + +L +G + ++ + F+ Sbjct: 488 TSFAKLLVQGRDACAVLNRICAGNVD-VAVGTSVYTGVLNARGGYESDLTVMRLGAEKFL 546 Query: 67 LE----------------IDRSKRDSLIDKLLFYKL------RS-----NVIIEIQPING 99 + I L D Y + RS + G Sbjct: 547 IVTGSAQAVHDADWIVKNIPADAHAILTDVTSSYAVLALMGPRSRDLLGKLSSADLSNAG 606 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA---------------SDIKTY 144 +E ++ R + L E +D Y Sbjct: 607 FPFGTIREIDIGYATAYANRMTYVGELGWELIVPTEFAVGVYEALHEAGREFGLADAGYY 666 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LRI G + P I P A + + G +IG++ + + + + Sbjct: 667 ALDALRIEKGFRAWGRELTPD-IDPWQAGLGFAVAMD-KPGGFIGRDALIKSKPLAAPAR 724 Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL----AIARIDK---VDHAIKK 253 R ++ T D P G IL D +G + L A+ I+ VD A Sbjct: 725 RVVLFTLDDAEPMLWGGELILRDGKPVGEVRSAAYGHTLGRSVALGLIEHEAGVDAAFLS 784 Query: 254 GMALTVH 260 G + Sbjct: 785 GERFEID 791 >gi|56478935|ref|YP_160524.1| glycine cleavage system aminomethyltransferase T [Aromatoleum aromaticum EbN1] gi|56314978|emb|CAI09623.1| Aminomethyltransferase of Glycine cleavage system [Aromatoleum aromaticum EbN1] Length = 360 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 23/164 (14%) Query: 12 IKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G A +L+ ++ DV L A S +L P G ++ ++ ++ + ++ Sbjct: 55 LDLEGPDATTWLRGLLANDVAKLHEPGKALYSCMLNPDGGVIDDLIVYYFSPTSYRIVVN 114 Query: 71 RSKRDSLIDKLLFYKL----------RSNVI-IEIQPING---VVLSWNQEHTFSNSSFI 116 D + + + R ++ I +Q N + H S S Sbjct: 115 AGTADKDVAWMRQHIAASGANVTLESRRDLAMIAVQGPNARDKTWAALPDTHAASESLKP 174 Query: 117 DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGI 153 + D+L+ RT E A ++ L G+ Sbjct: 175 FSAARVGDLLIARTGYTGEDGFEITLPAARAEAVWNALA-AAGV 217 >gi|21232308|ref|NP_638225.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767559|ref|YP_242321.1| glycine cleavage system aminomethyltransferase T [Xanthomonas campestris pv. campestris str. 8004] gi|24636851|sp|Q8P6T8|GCST_XANCP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|81306461|sp|Q4UXC2|GCST_XANC8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|21114076|gb|AAM42149.1| glycine cleavage T protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572891|gb|AAY48301.1| glycine cleavage T protein [Xanthomonas campestris pv. campestris str. 8004] Length = 369 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 52/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A + +L PQG ++ ++ ++E+ F Sbjct: 50 SHMTVVDLHGVRVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + RD + + R V ++ + ++ +D + A Sbjct: 110 RLVVNAATRDKDLQWIGEQAARFEVRVKERADFAMIAVQGPNARSKVIDLLDPADASAAS 169 Query: 126 LLHRTWGHNEKI-------------------------ASDIKTYHELRINHGIVDPNT-- 158 L R + A + ++ L + HG+ Sbjct: 170 KLGRFAALQTRTRDGVALFLARTGYTGEDGFEIVLPQADAVAFWNAL-LAHGVAPAGLGA 228 Query: 159 --------------DFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 + + P++A + I+L +G +IG+ V+ + + R+ Sbjct: 229 RDTLRLEAGMNLYGQDMDDNVTPYEAALAWT--ITLDEGRDFIGRSVLESQKAQGAPRQM 286 Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 ++ + G +L+ E GT +G KA+A AR+ + + Sbjct: 287 IGVVMDEKGVLRHGQKVLSAGGEGEILSGTFSPTLG-KAIAFARV-PAGSIDDLRVDIRG 344 Query: 260 HGVRVKASF 268 V ++A Sbjct: 345 KQVPLRAVK 353 >gi|323354293|gb|EGA86136.1| Iba57p [Saccharomyces cerevisiae VL3] Length = 380 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|207343780|gb|EDZ71136.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 245 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38 L N+++I++ G + FL ++T+ ++ T+ Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109 Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65 SA L +GK++ +I + Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 +LE+ + D ++ L +KL + + E + + +W+ E F N Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215 >gi|256842014|ref|ZP_05547519.1| glycine cleavage system T protein [Parabacteroides sp. D13] gi|256736330|gb|EEU49659.1| glycine cleavage system T protein [Parabacteroides sp. D13] Length = 361 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94 K ++ +L L S V E Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175 Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152 V++S + ++ G E I S + LR+ G Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKSIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K + + + R + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G I ++ IG + + + + + + ++ + Sbjct: 294 IPRHGYEIADAEENVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353 Query: 266 ASFPH 270 Sbjct: 354 VVKAP 358 >gi|225570253|ref|ZP_03779278.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM 15053] gi|225161048|gb|EEG73667.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM 15053] Length = 362 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 33/69 (47%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G+ A+ LQ ++T + + AR S + +G + ++ K +D + Sbjct: 51 SHMGEILCEGRDALDNLQMLLTNNFANMSDGQARYSPMCNEKGGTVDDLIVYKEADDRYF 110 Query: 67 LEIDRSKRD 75 + ++ + +D Sbjct: 111 IVVNAANKD 119 >gi|194366845|ref|YP_002029455.1| glycine cleavage system aminomethyltransferase T [Stenotrophomonas maltophilia R551-3] gi|238693494|sp|B4SSE0|GCST_STRM5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|194349649|gb|ACF52772.1| glycine cleavage system T protein [Stenotrophomonas maltophilia R551-3] Length = 370 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 1/142 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F Sbjct: 50 SHMTVVDLRGDQVKPFLRRLLANSVDKLKVTGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ S R+ + L V +E +P ++ + E A Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVTVEQRPDLAILAVQGPQARDIVIGLAREADRAALT 169 Query: 126 LLHRTWGHNEKIASDIKTYHEL 147 L R + I+ + Sbjct: 170 KLGRFAALQAQSDDGIELFVAR 191 >gi|258543779|ref|ZP_05704013.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC 15826] gi|258521015|gb|EEV89874.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC 15826] Length = 367 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 57/311 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G L+ ++ D+ L R + ++ QG I ++++ ED F Sbjct: 53 SHMGQVLVHGADVAASLERLLPVDLQGLAVGQQRYALLMNAQGGIDDDLMLTRRAED-FY 111 Query: 67 LEIDRSKRDSLIDKLLF---------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 + ++ + +D+ KL ++ RS ++ +Q V + E + +F Sbjct: 112 VVVNAACKDADFAKLRAGLPDCEVSWWQARS--LLALQGPEAVEVLAAIEPAVRDLTFMH 169 Query: 116 ----------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 D+R ++ LL + + L Sbjct: 170 GGEFTLLGIPCWVSRSGYTGEDGYEISVPDDRAAVLADLLCKDPRVKP---VGLGARDSL 226 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKR 203 R+ G+ D +T +L+ + + G Y G +VV RKR Sbjct: 227 RLEAGLCLYGNDIDATTTPIEASLIWAIQKVRRPGGERAGGYPGADVVGEQIENGAPRKR 286 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257 + + + + ++G + G +A+ + A+ + Sbjct: 287 VGLAIDGRAPVRAHTELYLGAEKVGEVTS--GGFGATLNAPIAMGYVQAAHAAVGTKLVA 344 Query: 258 TVHGVRVKASF 268 V G V Sbjct: 345 KVRGKDVAVEV 355 >gi|229589816|ref|YP_002871935.1| putative aminomethyltransferase-like protein [Pseudomonas fluorescens SBW25] gi|229361682|emb|CAY48563.1| putative aminomethyltransferase-like protein [Pseudomonas fluorescens SBW25] Length = 770 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 58/303 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A LQ +T DV L SA+ G +L + ++ D F Sbjct: 447 EIIGPDAEALLQYCLTRDVRRLAVGQVVYSAMCHAHGGMLDDGTLLRLGPDNFRWICGED 506 Query: 73 KR----DSLIDKLLFYKLRSN---VIIEIQPING--------------------VVLSW- 104 KL K+ I + G L W Sbjct: 507 YAGVWLREQAQKLGM-KVWVKSASEQIHNLAVQGPLSRELLKQMVWTPPTQPSVETLGWF 565 Query: 105 ----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 + F + R L W E + ++ Sbjct: 566 RFLVGRLDGFDGCPLMISRTGYTGELGFEVWCQPEDAVQVWDRIWQLGQPLGLVPLGLEA 625 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G++ +F T P +A + + +IG++ + R + Sbjct: 626 LDLLRIEAGLIFAGYEFSDQTD-PFEAGIGFSVPLKSKTDDFIGRDALLRRSAHPSHKLV 684 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259 + ++G +++ G P+ ++G + L A+ R+D + G L + Sbjct: 685 GLHLSG-NEVAHHGDPVYQGRAQVGVITSACRSPLLASNIALCRVD--VSCAEPGTELEI 741 Query: 260 HGV 262 V Sbjct: 742 GKV 744 >gi|300021622|ref|YP_003754233.1| glycine cleavage system protein T [Hyphomicrobium denitrificans ATCC 51888] gi|299523443|gb|ADJ21912.1| glycine cleavage T protein (aminomethyl transferase) [Hyphomicrobium denitrificans ATCC 51888] Length = 372 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 80/268 (29%), Gaps = 48/268 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + V G A FL ++T D+ + S I+ G ++ L+ D F Sbjct: 54 SGLRLVNVSGPDAQAFLNHLLTTDISKTKAGDSHISNIVNANGGLIDDVLVYVDGPDQFR 113 Query: 67 L--------EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLS 103 + E + + K+ +V I + G+ Sbjct: 114 VSHGGGSFEEAAEAAKGGFNVKVERDN---DVHILSLQGPLALETLAPHTPMDLAGLGYF 170 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIASDIKT-YHE 146 +Q+ T S R + + + G + I + Sbjct: 171 RHQKSTLFGKSVSLARGGYSAERGYEVFCSAADAPFIWDSILKAGKDAGIVPASWSCLDI 230 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 +R+ G++ D P + D I L+K ++G++ ++ + R Sbjct: 231 IRVEGGLLFFPFDMTNEDTTPWEVRADWT--IDLSKPAFVGKDALA--AKKGKERSFIAG 286 Query: 207 ITGTDDLP-PSGSPILTDDIEIGTLGVV 233 + GS I + ++G + Sbjct: 287 VEVEAAKAIEPGSKITANGEQVGVVCSS 314 >gi|170742018|ref|YP_001770673.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46] gi|168196292|gb|ACA18239.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46] Length = 843 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 96/302 (31%), Gaps = 54/302 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G A L I D+ +P + L +G I +++ E F Sbjct: 486 LSSFAKFVLDGADAEAALNRICANDIA-IPVGQVVYTPWLNERGGIEADVTVTRESETRF 544 Query: 66 ILEIDRSKRDSLIDKLLF-----------YKLRSNVIIEI-QPINGVVLSWNQEHTFSNS 113 ++ + + L + ++ I P + +LS + SN+ Sbjct: 545 LIVTAAATQARDFAWLTRNIPAEARATALDVTSAQAVLGIMGPRSRELLSLLTDADLSNA 604 Query: 114 SFI---------------DERFSIADVLLHRTWGHNE--------------KIASDIKTY 144 +F R + L + E + + Y Sbjct: 605 AFPFGTSRVVDLAYARVRASRITYVGELGWELFIPTEFAQGVFDALMAAGRDLGLRLAGY 664 Query: 145 HE---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200 H LR+ G D P ++ + ++ K G +IG+E + R + ++ Sbjct: 665 HALNSLRMEKGYRHWGHDITDEDT-PLESGLSF--AVAWDKNGGFIGREALLR-RRDHVP 720 Query: 201 RKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258 +R + I L PIL D IG + G + R + + G ALT Sbjct: 721 SRRLVGIALESPDHLLYHNEPILRDGRIIGRVTS--GMFGHTVGRALGLGYVATNGQALT 778 Query: 259 VH 260 Sbjct: 779 AD 780 >gi|87300553|ref|ZP_01083395.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. WH 5701] gi|87284424|gb|EAQ76376.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. WH 5701] Length = 378 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 61/311 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61 S+ +++ G A LQA++ +D+ + A + +L G I ++ + Sbjct: 53 SHMGVLRLRGDGAKDALQALVPSDLFRIGPGEATYTVLLNEAGGIRDDLIVYDLGRPEDD 112 Query: 62 ---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117 D +L I+ ++ L S ++I + +GV+L+ + + Sbjct: 113 EGPADEVLLIINAGCAEADTAWLRSQLEPSGLVITDRKADGVLLALQGPEAIARLEALAA 172 Query: 118 ------ERFS--------------------------------------IADVLLHRTWGH 133 RF A V L Sbjct: 173 TDLGGLPRFGHRSIQLAGTAAAEAAGATAFVARTGYTGEDGVELLLDRAAGVALWAQLLA 232 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + LR+ + +D ST P +A + L + + +IG+EV+ R Sbjct: 233 EGVTPCGLGARDTLRLEAAMHLYGSDM-NSTTTPLEASLGWLVHLEMP-AAFIGREVLER 290 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249 + R+ + + G P+L +G + +A+A+A + Sbjct: 291 QSAEGVSRRLVGLKLQGRAIARHGYPVLRAGQVVGEVTSGTWSPTLGEAIALAYV--PAD 348 Query: 250 AIKKGMALTVH 260 A + G L V Sbjct: 349 ATRVGTELAVE 359 >gi|10639157|emb|CAC11159.1| probable aminomethyltransferase [Thermoplasma acidophilum] Length = 336 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 69/320 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A FL + V L +A L G ++ ++ ++ ED++ Sbjct: 25 SHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRMGEDSYF 84 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------------- 93 + + + + + +V IE Sbjct: 85 FVPNAGTTEKIYRWVSDHSAGYSVKIENVSNRISSIALQGPESEEVLNELGFSYPGYFKF 144 Query: 94 ----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDI 141 I + +++S FI ++ L + + + Sbjct: 145 QYVSGKYMNAITGKDQIIISGTGYTGEKGVEFIIPNEHAVELWKKLLEAINKRNGLPAGL 204 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQ---EVVSRIQ 195 LR+ G++ DF P++A +S ++G+ E+ R Sbjct: 205 GARDTLRMEKGMLLSGHDF-NEDRDPYEA------SVSFIVNNDEDFVGKKNLEIRRRSD 257 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251 H R +++ D +P +G+PI +GT+ K +A+ IDK Sbjct: 258 HEIF---RGFVLS--DGIPRNGNPIKAGGKRVGTVTSGTISPVLNKGIALGYIDKAYSKE 312 Query: 252 KKGMALTVHGV--RVKASFP 269 + + + V + + P Sbjct: 313 NTEVMIEIRSVDHKAVVTKP 332 >gi|16082469|ref|NP_393488.1| aminomethyltransferase (glycine cleavage system T protein) [Thermoplasma acidophilum DSM 1728] Length = 359 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 69/320 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V GK A FL + V L +A L G ++ ++ ++ ED++ Sbjct: 48 SHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRMGEDSYF 107 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------------- 93 + + + + + +V IE Sbjct: 108 FVPNAGTTEKIYRWVSDHSAGYSVKIENVSNRISSIALQGPESEEVLNELGFSYPGYFKF 167 Query: 94 ----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDI 141 I + +++S FI ++ L + + + Sbjct: 168 QYVSGKYMNAITGKDQIIISGTGYTGEKGVEFIIPNEHAVELWKKLLEAINKRNGLPAGL 227 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQ---EVVSRIQ 195 LR+ G++ DF P++A +S ++G+ E+ R Sbjct: 228 GARDTLRMEKGMLLSGHDF-NEDRDPYEA------SVSFIVNNDEDFVGKKNLEIRRRSD 280 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251 H R +++ D +P +G+PI +GT+ K +A+ IDK Sbjct: 281 HEIF---RGFVLS--DGIPRNGNPIKAGGKRVGTVTSGTISPVLNKGIALGYIDKAYSKE 335 Query: 252 KKGMALTVHGV--RVKASFP 269 + + + V + + P Sbjct: 336 NTEVMIEIRSVDHKAVVTKP 355 >gi|87199867|ref|YP_497124.1| glycine cleavage system aminomethyltransferase T [Novosphingobium aromaticivorans DSM 12444] gi|87135548|gb|ABD26290.1| aminomethyltransferase [Novosphingobium aromaticivorans DSM 12444] Length = 388 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 108/310 (34%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A L+AI+ D+ TLP AR S +L G IL ++++ F Sbjct: 70 SHMGQIYVSGEGAEAALEAILPIDLSTLPLGGARYSLLLNEDGGILDDLMVTRWGT-GFY 128 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116 L ++ + + I L Y L V + N + + + Sbjct: 129 LVVNGATKWDDIGHLREY-LPDEVTLNHLEDNALFALQGPAACAALEPLVKGEQPLSALT 187 Query: 117 -----DERFSIADVLLHRTWGHNEK---------IASDIKTY---------------HEL 147 R D + R+ E A+++ L Sbjct: 188 FMRGAAFRLGGVDAWISRSGYTGEDGFEISVPSTKAAELADLICAQPQVKTIGLGARDSL 247 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRP 204 R+ G+ D T+ P A DLL GI+ + G ++G + V + +R Sbjct: 248 RLEAGLPLYGHDMT-DTVDPVSA--DLLFGINKRRRNEGGFVGADKVLPLIASGAATRRV 304 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 + G+ +L++D E+GT+ A+A +D +++ Sbjct: 305 GLAIEGRMAAREGATVLSNDAEVGTVTSGGFSPSLERPIAMAYVPVDLAAPGTA--LSID 362 Query: 259 VHGVRVKASF 268 V G ++ AS Sbjct: 363 VRGRKLAASV 372 >gi|284008419|emb|CBA74862.1| aminomethyltransferase (glycine cleavage system T protein) [Arsenophonus nasoniae] Length = 377 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 101/306 (33%), Gaps = 48/306 (15%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + I + G+ FL+ ++ DV L A + +L G ++ ++ ++D + L Sbjct: 65 TIIDLHGELCRDFLRYLLANDVAKLKEPGEALYTGMLNASGGVIDDLVVYYFDDDYYRLI 124 Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----- 123 + + R + + + + ++++ + + S +DE+ IA Sbjct: 125 ANSATRQKDLAWINEHIKNYLIDVQVRDDLAFIAIQGPDAQQKVQSLLDEQQKIAVINMP 184 Query: 124 ------------------DVLLHRTWGHNEKI-------------ASDIKTYHELRINHG 152 L + E+ + + LR+ G Sbjct: 185 LFHGKQINDWFITTVGYTGELGYEIALPKEQAVNFWQKLLDLNIKPAGLAARDTLRLEAG 244 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR--------KRP 204 + + + P A M+ + +IG+E + R + + + Sbjct: 245 MNFYGQEM-NELVSPLAANMEWTIAWQPEERDFIGREALERQRQVGTEKLVGLVMRDRGT 303 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 + + + I GT +G ++A+AR+ ++ ++ + + H + V Sbjct: 304 LQADLPVRFIDTAGKLCQGIITSGTFSPTLG-LSIALARV-PLNIGMQAVVQIKKHEMPV 361 Query: 265 KASFPH 270 + P Sbjct: 362 QVVKPS 367 >gi|327482759|gb|AEA86069.1| glycine cleavage system aminomethyltransferase T [Pseudomonas stutzeri DSM 4166] Length = 360 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 98/303 (32%), Gaps = 42/303 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A SA+L +G ++ ++ + + Sbjct: 50 SHMTVVDVAGDQASAYLQHLLANDVARLKSPGRALYSAMLNERGGVIDDLIVYLT-DWGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ S RD + + V I +P ++ + + + + Sbjct: 109 RLVVNASTRDKDLAWMQAQAADFAVEINERPQLAMLAIQGPQARTRTAELVSQSRAALIH 168 Query: 120 -------FSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIV------------ 154 + D + RT E A + + GI Sbjct: 169 ELKPFQGLAEGDWFIGRTGYTGEDGLEIILPAEQAPDFLSELVGAGIPPIGLGARDTLRL 228 Query: 155 DPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + + + + P A M + ++G+ + + + + + K ++ Sbjct: 229 EAGLNLYGQDMTEDVSPLAANMGWTIAWEPAERDFVGRAALEQQRAQGDLPKLVGLVLEE 288 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + + + + + G + K++A+AR+ + + + V+ Sbjct: 289 RGVLRAHQVVRVNGVGDGEITSGSFSPTLGKSIALARV-PAGTGERAEVEIRGKWYPVRV 347 Query: 267 SFP 269 P Sbjct: 348 VQP 350 >gi|163732810|ref|ZP_02140255.1| sarcosine dehydrogenase, putative [Roseobacter litoralis Och 149] gi|161394170|gb|EDQ18494.1| sarcosine dehydrogenase, putative [Roseobacter litoralis Och 149] Length = 796 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 91/289 (31%), Gaps = 57/289 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A FLQ + ++ P A + +L +G +I +D + L + Sbjct: 491 IEVTGPDACAFLQHLAMRNMDR-PAGTAIYTPLLNERGTYESDITAHRIADDHYRLFV-- 547 Query: 72 SKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFSIADVL 126 + I + L + LR +V ++ + VL E ++ Sbjct: 548 --GTNAIKRDLAWALRQSDGFDVTLKDSTEDYAVLCLMGPEAARIVAATGAPELCDLGYF 605 Query: 127 ------------------------------------LHRTWGHNEKIASDIKTYHELRIN 150 ++ + + + + +RI Sbjct: 606 KVGPAFIAGKHVRAVRMSYVGEAGWEITCKAENAQAIYAAFQSAGAVPAGLFAQSSMRIE 665 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITG 209 G + + P + M +G++ G +IG Q + R+Q ++ + I Sbjct: 666 KGFAAMGHEL-DGDLSPVEVGM---HGMAKKTGGFIGAQALAERVQ---TSKRSLVTIVF 718 Query: 210 TDD--LPPSGSPILTDDIEIGTLGVVV-GKKALAIARIDKVDHAIKKGM 255 D+ +P P+ IG + G + A + V+ + G Sbjct: 719 DDETAVPLGHEPVYAGPDIIGQITSASFGYRIGAPVALAHVNATVDGGA 767 >gi|84393495|ref|ZP_00992250.1| glycine cleavage system T protein [Vibrio splendidus 12B01] gi|84375848|gb|EAP92740.1| glycine cleavage system T protein [Vibrio splendidus 12B01] Length = 377 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G +A L++++ D++ LP R + QG I+ +++ + D Sbjct: 59 SHMGQLRLHGANAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + + ID L + L ++V +E+ ++ + + + F + Sbjct: 118 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 176 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 177 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSLRLE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D +T +L+ + + G + G +++ +I +++ RKR Sbjct: 237 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 296 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + +D +IG + ++A R D + + Sbjct: 297 LVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNAGKPVSMAYVRTDLAAIGTEVFADVR 356 Query: 259 VHGVRVKASF 268 + + Sbjct: 357 GKKLPMTVEK 366 >gi|302816394|ref|XP_002989876.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii] gi|300142442|gb|EFJ09143.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii] Length = 409 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 46/276 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK AIPFL+ ++ D+ L SA +G + +I+K++ Sbjct: 81 SLFDVSHMCGLTLKGKDAIPFLETLVVGDIAGLSDGSCSLSAFTNEKGGTIDDTVITKVK 140 Query: 62 EDTFILEIDRSKRDSLI----DKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFI 116 + L ++ RD + L YK + V + ++ + + Sbjct: 141 DGHVYLVVNAGCRDKDLAHIGKHLEAYKSKGKDVSSHVHDERSLLALQGPLAASTLQHLV 200 Query: 117 DERFSI-------------ADVLLHRTWGHNEK--------------------------I 137 E S A+ + RT E + Sbjct: 201 KEDLSKVYFGNFRILSVNGAECFITRTGYTGEDGFEISVPSEHALELAKALLEKSEGKIL 260 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + + LR+ G+ D +T + + +G ++G +V+ + Sbjct: 261 LTGLGARDSLRLEAGLCLYGHDMDDNTSVVEAGVAWTIGKRRRAEGGFLGADVILKQLKE 320 Query: 198 NIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 + RKR +I+ + PI D IG + Sbjct: 321 GVSRKRVGMIS-EGAPARAHCPIYNASDEVIGEVTS 355 >gi|88860306|ref|ZP_01134944.1| aminomethyltransferase [Pseudoalteromonas tunicata D2] gi|88817504|gb|EAR27321.1| aminomethyltransferase [Pseudoalteromonas tunicata D2] Length = 359 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 100/302 (33%), Gaps = 45/302 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A + +L +G ++ +I E + Sbjct: 50 SHMTIVDVKGADAKAFLRKLVANDVAKLTVPGKALYTGMLNHEGGVIDDLIIYFFSETDY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123 L ++ + R+ + + V + +P ++ ++ + + A Sbjct: 110 RLVVNSATREKDLAWIAQISADFAVEVTERPEFAMIAVQGPNAKAKTATVLSAAQNAAIE 169 Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149 L + + + LR+ Sbjct: 170 GMKPFFGVQADNLFIATTGYTGEAGYEIVVHNDEAADLWQKLLDAGVAPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P A M +IG+ + + + + K ++ Sbjct: 230 EAGMNLYGLDM-DETVSPLAANMGWTITWEPEDRDFIGRAALVKQKAEG-VDKLVGLVYE 287 Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI-DKVDHAIKKGMALTVHGVRV 264 + SGS ++ + E GT +G ++A+AR+ + V + M + V+V Sbjct: 288 DKGVLRSGSKVIVEGGEGVITSGTFSPTLG-YSIALARVPNTVGETAQVEMRKKLVDVKV 346 Query: 265 KA 266 A Sbjct: 347 VA 348 >gi|213966371|ref|ZP_03394551.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46] gi|213950968|gb|EEB62370.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46] Length = 390 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 109/328 (33%), Gaps = 74/328 (22%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS I+V G+ A FL ++I+A + L A+ + I+ G I+ +I ++ Sbjct: 60 LSLMGIIRVTGEDAAAFLAHSLISA-IKPLALGRAKYTMIVQEDGGIIDDLIIYRLGSHE 118 Query: 65 FILEIDRSKRDS-----------------------------------LIDKLLFYKLRSN 89 F+L + + + L+ +LL L + Sbjct: 119 FMLVQNAAAAEDVYSTLRERVGGYNVQVERMNDKNVLLAIQGPKAAKLLRRLLPQDLHAT 178 Query: 90 VI---------IEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTW--GHNEK 136 + +E+ + +V + E F D + ++ + E Sbjct: 179 LDGMNYYSCTLLEVAGVEMIVARTGYTGEDGFEIFPPADRAVEVWRAIIAAGGKVENPED 238 Query: 137 IASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186 A + LR+ G+ + P +A + + + TKG +I Sbjct: 239 PADNGADLGLLPCGLACRDTLRLEAGMPLYGYELTRDRT-PLEAGLKSI--MGPTKGQFI 295 Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSP-ILTDDIEIGTLGVV----VGKKALA 240 G+ + +R ++ + + + D P G+ I + E+G L + Sbjct: 296 GRNALI---NRPQSKELLVGLRFSGDEAPKRGTKLIDAEGNEVGVLTSAKVSPTLGHPIG 352 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASF 268 A + + A G LTV G A+ Sbjct: 353 FAYVQRWQSAT--GTELTVEGTDTTATV 378 >gi|293394584|ref|ZP_06638878.1| aminomethyltransferase [Serratia odorifera DSM 4582] gi|291422893|gb|EFE96128.1| aminomethyltransferase [Serratia odorifera DSM 4582] Length = 388 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 73 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLSEDYF 132 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ ++ + Sbjct: 133 RLVVNSATRDKDLAWIEQHAAPYGVALTVRDDLALIAVQGPQA 175 >gi|154493553|ref|ZP_02032873.1| hypothetical protein PARMER_02893 [Parabacteroides merdae ATCC 43184] gi|154086763|gb|EDN85808.1| hypothetical protein PARMER_02893 [Parabacteroides merdae ATCC 43184] Length = 361 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 95/305 (31%), Gaps = 56/305 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPIGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94 ++ +L L S V E Sbjct: 116 IAKDWDWCVSHNTVGAELENSSDRTAQLAVQGPKAVEVLQRLTPVDLSSIPYYSFVTGEF 175 Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150 V++S + F + D+ +I + + G E I + LR+ Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPDDAMTIWNAIFE--AGKPEGIKPIGLGARDTLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G D T P +A + + + K + + + R + + RK Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVSRKLCAFELVD 291 Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G I + IG + + + + + + + V G Sbjct: 292 KGIPRHGYEIADAEGNIIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTE--ICIKVRGRN 349 Query: 264 VKASF 268 +KA Sbjct: 350 LKAQV 354 >gi|134102062|ref|YP_001107723.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] gi|291004903|ref|ZP_06562876.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] gi|133914685|emb|CAM04798.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] Length = 950 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 62/287 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A FL + T LP AR + G +L + ++ ED +++ Sbjct: 617 IEIAGPDAATFLNRVYTNAFAKLPVGKARYGMMCGADGMVLDDGVSLRLAEDRYLMTTTT 676 Query: 72 SKRDSLID-----------KLLFY--KLRSN-VIIEIQPINGVVLSWNQEHTFSNSS--- 114 ++D L + + I + + + S+ Sbjct: 677 GNAAKVMDWLEEWLQTEWPHLAVHCTSVTEQWATIAVAGPDSRTVVGRMAPALDVSAEAF 736 Query: 115 ---------------FIDERFSIADVLLHRT----------WGHNEKIASDI-------K 142 R S + L + W + +D+ + Sbjct: 737 GFMEFRETVLHNGIPARICRISFSGELAYEINVASWYGLAVWEAVAEAGADLDITPYGTE 796 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T H LR G V D T+ PHD MD + +S K ++G+ +R RK Sbjct: 797 TMHVLRAEKGFVIVGQD-TDGTVTPHDLGMDWV--VSKRKD-FVGRRSFARPDTAREDRK 852 Query: 203 RPMIITGTDDLP--PSGSPILTDDIEI-------GTLGVVVGKKALA 240 + + + D P G+ ++ G + AL Sbjct: 853 QLVGLLPVDPAERLPEGAQLVAPGAPAEPPVPMLGHVTSSYRSAALG 899 >gi|118618856|ref|YP_907188.1| glycine cleavage system aminomethyltransferase T [Mycobacterium ulcerans Agy99] gi|166221558|sp|A0PTP8|GCST_MYCUA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|118570966|gb|ABL05717.1| aminomethyltransferase GcvT [Mycobacterium ulcerans Agy99] Length = 367 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIF 114 Query: 67 LEIDRSKRDSLIDK--------LLFYKL-RSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVAALQAAAPSGLTITDLHRSYAVLAVQGPRSTEVLAALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148 D ++ V + RT W + + LR Sbjct: 175 ADSSYNGVSVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVAEVGGSPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMII 207 G + I P A I K + G+E + + R R + + Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AIGWKKDAFFGREALLAEKAAGPRRLPRGLRM 291 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH--- 260 G L P G +L +G +A+A ID D ++ G +TV Sbjct: 292 VGRGVLRP-GLTVLNGSTPVGVTTSGTFSPTLQIGIALALID-TDAGVEDGQQITVDVRG 349 Query: 261 -GVRVKASFPH 270 V + P Sbjct: 350 RAVECEVVRPP 360 >gi|83952199|ref|ZP_00960931.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] gi|83837205|gb|EAP76502.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] Length = 373 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 55/271 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + T D+ R I G+++ ++ K+ + F L I Sbjct: 65 VEIAGPDAARLIQYLTTRDMRGAKVGQGRYVPICDHAGRLINDPVLLKLGDGRFWLSIAD 124 Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92 S K + ++ L L Y + Sbjct: 125 SDIELWASAIAAERGFDVEVHEPDVSPLAIQGPKAERVVADLFGDWVTELRYFGFRQTEL 184 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRI 149 P+ W+++ F R + ++ +G +D++ RI Sbjct: 185 RGIPLVLARSGWSKQGGFELYLQDGTRGAELWQMVKAAGTPYGIRPGAPNDLE-----RI 239 Query: 150 NHGIVDPNTD--FLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKRPMI 206 G+V D + P + + L + K ++G+E + R++ R+R Sbjct: 240 ESGLVSYGADGRLQVNPCNPFEIGLGAL--VDFDKPEDFVGREALLRLRREGAARRRVSY 297 Query: 207 ITGTDDLP--PSGSPILTD-DIEIGTLGVVV 234 + + G P+LT G L V Sbjct: 298 VIEGAPIQGFEHGLPVLTGQGAPAGVLSEAV 328 >gi|148244966|ref|YP_001219660.1| glycine cleavage system aminomethyltransferase T [Candidatus Vesicomyosocius okutanii HA] gi|146326793|dbj|BAF61936.1| glycine cleavage system aminomethyltransferase [Candidatus Vesicomyosocius okutanii HA] Length = 358 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 83/276 (30%), Gaps = 42/276 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ S + G A FLQ +I DV L A +L G I+ ++ + + Sbjct: 49 SHMSVVDFKGVEAKAFLQVLIANDVDKLRVQGKALYGCMLNELGGIVDDLIVYCRNNEYY 108 Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNVIIEIQPINGVVLS 103 + I+ D + L + R V I + V Sbjct: 109 RMVINARTTDKDMAWINTQANSFDVLVEPISDLAMIAVQGPNAREKVFSAIPGVEEVCGE 168 Query: 104 WNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 + S R + + + LR+ Sbjct: 169 LKSFNAASLGKLFIARIGYTGEDGFEIMLPLNAAKFTWKMLLEAGVKPYGLGAFDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + + P +A + +S +IG++ + ++ + + + ++ Sbjct: 229 AGVSLYGLEM-NDMVSPLEAALAWTVDLSNENRAFIGRDALETLKDKGVKKTIIGLVLEG 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIA 242 + + ++T E G + + KA+A+A Sbjct: 288 KGVIRNHQKVMTSLGE-GKVTSGIFSPTIGKAIALA 322 >gi|294460278|gb|ADE75721.1| unknown [Picea sitchensis] Length = 411 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 103/319 (32%), Gaps = 56/319 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK +PFL+ ++ ADV L + +G +++K++ Sbjct: 83 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLSPGSGTLTVFTNEKGGATDDSIVTKVK 142 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLR------------------------------ 87 +D + ++ RD + + +K R Sbjct: 143 DDHIYIVVNAGCRDKDLAHIESHMKAFKARGGDVDWQIHDDRSLLALQGPLAAPTLQKLT 202 Query: 88 ----SN--------VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 S + I P + E F S D + +L G Sbjct: 203 KEDLSKLYFSSFRMIDINGSPCYITRTGYTGEDGFEISVPSDHAVDLTKAILDGGEGKLR 262 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRI 194 + LR+ G+ D I P +A + G +G ++G EV+ + Sbjct: 263 LTG--LGARDSLRLEAGLCLYGNDME-QDITPVEAGIAWTIGKRRRTEGGFLGAEVILKQ 319 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDH 249 R+R +I+ P S S I+ IG + KK +++ + +H Sbjct: 320 LEEGPARRRVGMISA-GPPPRSHSEIMDASGNPIGEVTSGGFSPCLKKNISMGYVKSGNH 378 Query: 250 AIKKGMALTVHGVRVKASF 268 + + V G A+ Sbjct: 379 KTGSELKVLVRGKPYDATV 397 >gi|195997667|ref|XP_002108702.1| hypothetical protein TRIADDRAFT_18436 [Trichoplax adhaerens] gi|190589478|gb|EDV29500.1| hypothetical protein TRIADDRAFT_18436 [Trichoplax adhaerens] Length = 373 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 96/300 (32%), Gaps = 54/300 (18%) Query: 20 IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79 + FL+++I DV LP S G I+ ++SKI +++ + + + + ++ Sbjct: 63 VKFLESLIVTDVANLPQGRGTLSVFTNENGGIIDDLIVSKISDESISVVSNAACSEKVVQ 122 Query: 80 KLL-----------------------FYKL---RSNVIIE-------------------I 94 + L +S V+++ I Sbjct: 123 HIQTKMNQFNSSSHQSVDVKVITNRGLLALQGPKSAVVLQRLTNSNLSQIPFMGYTNSNI 182 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 I+G ++ A L H E + + LR+ G+ Sbjct: 183 ADIDGCFIARGGYTGEDGFEISVPSDYCA-KLAQEFLKHPEVKLAGLGARDSLRLEAGLC 241 Query: 155 DPNTDFLPSTIFPHDALMDLLNGIS-LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P +A + G + G + G + + + RKR +I+ T Sbjct: 242 LYGNDI-DEETTPIEAGLAWTVGKARRNTGNFPGSDTIIKQLQEGPSRKRVGLIS-TGPP 299 Query: 214 PPSGSPILTD-DIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268 G+ I + D EIG + +L A+ I I + L V +V A+ Sbjct: 300 ARGGTKIFSSHDDEIGIITSGSPSPSLKKNIAMGYIKTAFCKIGTEVQLQVRNKKVNATI 359 >gi|306840695|ref|ZP_07473444.1| glycine cleavage system T protein [Brucella sp. BO2] gi|306289268|gb|EFM60512.1| glycine cleavage system T protein [Brucella sp. BO2] Length = 367 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ ++V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKMGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173 Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152 Q + S + E + EK+ +D + LR+ G Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 + D P T P A + + + K + G + V + KR + Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314 >gi|254456654|ref|ZP_05070083.1| aminomethyltransferase, glycin cleavage system T protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083656|gb|EDZ61082.1| aminomethyltransferase, glycin cleavage system T protein [Candidatus Pelagibacter sp. HTCC7211] Length = 452 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 90/331 (27%), Gaps = 85/331 (25%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 I+V G A F +IT D + AR + G +L ++ +I ED F Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRIAEDEFWFSLSD 161 Query: 67 ---------------LEIDRSKRD------------SLIDKLLFYKLRSNVIIEIQPING 99 + + D +L+ L V + P G Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVSPVQIQGPKSKALMKDLCG----DQVDFDNMPFYG 217 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKT--------------- 143 + E S I + + + + + + A D+ Sbjct: 218 LA-----EVKVGGRSCIISQSGFSGEAGYEIYLRDSTLYAEDMWNAVLEAGKKHSLMVIA 272 Query: 144 -YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHR 197 H RI GI+ D P + +S KG Y+G+ + ++ Sbjct: 273 PAHHRRIQAGILSWGQDMDQQH-NPFQCNLGYQVSLSGKGEWSKKGDYVGKAALEKMGAE 331 Query: 198 NIIRKRPMIITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKAL 239 K+P + L G PI + +G + A+ Sbjct: 332 LKDGKKPYKLQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKKQNIAM 390 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 D +A G G + K P Sbjct: 391 GYVPFDGTLNA--NGFPKGKVGTKFKVHLPE 419 >gi|255015989|ref|ZP_05288115.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 2_1_7] gi|298377400|ref|ZP_06987353.1| glycine cleavage system T protein [Bacteroides sp. 3_1_19] gi|298265814|gb|EFI07474.1| glycine cleavage system T protein [Bacteroides sp. 3_1_19] Length = 361 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94 K ++ +L L S V E Sbjct: 116 IDKDWDWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175 Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152 V++S + ++ G E I + LR+ G Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K + + + R + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G I + IG + + + + + + ++ + Sbjct: 294 IPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353 Query: 266 ASFPH 270 Sbjct: 354 VVKAP 358 >gi|150006976|ref|YP_001301719.1| glycine cleavage system aminomethyltransferase T [Parabacteroides distasonis ATCC 8503] gi|166221559|sp|A6L8T3|GCST_PARD8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|149935400|gb|ABR42097.1| putative aminomethyltransferase [Parabacteroides distasonis ATCC 8503] Length = 361 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 85/307 (27%), Gaps = 54/307 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94 K ++ +L L S V E Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRIN 150 V++S + + + K + LR+ Sbjct: 176 AGCKNVIISNTGYTGAGGFELYF--YPSDGMTIWNAIFEAGKPEGIKPIGLGARDTLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G D T P +A + + + K + + + R + + RK Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQE 291 Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G I + IG + + + + + + ++ Sbjct: 292 KGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLK 351 Query: 264 VKASFPH 270 + Sbjct: 352 AQVVKAP 358 >gi|284045208|ref|YP_003395548.1| glycine cleavage system protein T [Conexibacter woesei DSM 14684] gi|283949429|gb|ADB52173.1| glycine cleavage system T protein [Conexibacter woesei DSM 14684] Length = 363 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 3/124 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+ G A+ FLQ +++ DV + A+ S + G +L ++ ED ++ Sbjct: 57 SHMGEIETRGPGALAFLQRLLSNDVAKIAVGGAQYSVLCREDGGVLDDLFTYRLAEDRYL 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + + + + S +V + + + +L+ + + + E AD Sbjct: 117 TVTNAANHAKDLAWFMRQVVASDDVEVVDRAADYAMLAVQGPEARALVAGLTE--GGADA 174 Query: 126 LLHR 129 L R Sbjct: 175 LPGR 178 >gi|162447263|ref|YP_001620395.1| glycine cleavage system T protein [Acholeplasma laidlawii PG-8A] gi|161985370|gb|ABX81019.1| glycine cleavage system, T protein [Acholeplasma laidlawii PG-8A] Length = 358 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 51/304 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLISKIEED 63 S+ I + GK A+ + T VL+ + +L G I+ ++ D Sbjct: 52 SHMGQILIEGKDALAY-----TNYVLSSTTELRPQNQYGLLLQNDGGIIDDLMVYPFSSD 106 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110 +L ++ S + + L K ++ + ++ ++F Sbjct: 107 QILLVVNASNIEKDFNHLSSIKHTFDIHLRNISDKFNCIAVQGPNSFKFLSKLFQDLPKH 166 Query: 111 ---------SNSSFIDERFSIADVLLHRTW---GHNEKIASD----------IKTYHELR 148 + + R + G+ I D + LR Sbjct: 167 SSDFMFTHNEHGPLLISRSGYTGEDGFEIYTYDGYASLIWDDLYKLGVKPIGLGARDTLR 226 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ + TI P +A + + K +IG+ + N +RK Sbjct: 227 FEAGMPLYGNEM-NETINPIEAGLGF--AVDFKKDDFIGKSALL-AYKENPLRKNVGFEL 282 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 ++ SG I + IG + AL A ID + + + + V Sbjct: 283 LEKNIARSGYEIYVGNQLIGHVTTGYLSPSTNIALGFALIDAKHAKLGTIIDIKIRNKFV 342 Query: 265 KASF 268 KA Sbjct: 343 KAVV 346 >gi|157963119|ref|YP_001503153.1| glycine cleavage system aminomethyltransferase T [Shewanella pealeana ATCC 700345] gi|189039321|sp|A8H7T1|GCST_SHEPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157848119|gb|ABV88618.1| glycine cleavage system T protein [Shewanella pealeana ATCC 700345] Length = 364 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 58/314 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L G ++ + + + + Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F D + + + Sbjct: 110 RIVVNSATREKDLAWINEQVKGFSVEVTERPELAMIAVQGPNAKAKAATVFNDAQNAAIE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + + + LR+ Sbjct: 170 GMKPFFGVQAGSLFIATTGYTGETGYEVIVPNDEAEALWQAFLDAGIKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ-------------H 196 G+ D ++ P A M + + G++ + +I+ Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTVAWEPAERDFNGRQALEKIKAEGTDKLVGLIMDA 288 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + +IR + D I + GT +G ++A+AR+ + + + Sbjct: 289 KGVIRHGMSVFFTDSDGVEQQGTITS-----GTFSPTLG-YSIAMARVPRSIGDV-AEVE 341 Query: 257 LTVHGVRVKASFPH 270 + V VK P Sbjct: 342 MRKKRVPVKVIAPS 355 >gi|295696804|ref|YP_003590042.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912] gi|295412406|gb|ADG06898.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912] Length = 380 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 53/276 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +V G+ A +Q +T D+ + + + G I+ ++ ++ + F L + Sbjct: 58 EVIGREAYLLMQYAMTNDLRRIGKGRQGIYTCLCKDDGGIVDDVIVYYLDNELFYLITNT 117 Query: 72 SKRDSLIDKLLFYKLRSNV---IIEIQPINGVVLSWNQEHTFSNSSFIDE---------- 118 R+ + L + R V +I++ + + + + + Sbjct: 118 LSREKVGRWLADMRDRLAVDAHVIDVTSSTAYLAVQGPKSADVVAELLGDGIRALSYFEM 177 Query: 119 ---RFSIADVLLHRT-----WGHNEKIASDIKTY----------------------HELR 148 R S + VLL RT G+ S+ + LR Sbjct: 178 AEFRLSDSPVLLTRTGYTGELGYELHFPSEYAFWMWECVTEAGRGYGMRPVGGFAIQTLR 237 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK----RP 204 TD + P +A + + L KG + G+ ++ IQHR + R+ R Sbjct: 238 AEKAYRAYGTDM-DANTNPFEAGLGWT--VRLDKGDFAGKSALADIQHRGVTRRLTGFRL 294 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + G+ LP G+ + + G L V L Sbjct: 295 DLAAGS--LPEKGTALRCEGRTAGYLTTVCASPTLG 328 >gi|226328257|ref|ZP_03803775.1| hypothetical protein PROPEN_02150 [Proteus penneri ATCC 35198] gi|225202990|gb|EEG85344.1| hypothetical protein PROPEN_02150 [Proteus penneri ATCC 35198] Length = 364 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 95/309 (30%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ ++ + Sbjct: 50 SHMTIVDLHGSQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDDSFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ + R+ + + + V I ++ ++ + E+ Sbjct: 110 RLVVNSATREKDLAWIEHHASDYVVDITVRDDLALIAVQGPHAQEKVQRLLTEQQRQVVS 169 Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + + LR+ Sbjct: 170 AMKPFYGVELDDLFIATTGYTGEAGYEIAMPKEQAVDFWKKLLAVGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + + TI P +A M +IG+E + +++ K ++ Sbjct: 230 EAGMNLYSQEM-DETINPLEANMGWTIAWVPEDRQFIGREALEKLRATGTD-KLVGLVMR 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + +G+ + D +G L V +A+AR+ + + Sbjct: 288 EKGVLRAGTAVHFTDD-LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLMRNR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EMPVEVVKP 354 >gi|260062498|ref|YP_003195578.1| glycine cleavage system aminomethyltransferase T [Robiginitalea biformata HTCC2501] gi|88784063|gb|EAR15233.1| aminomethyltransferase [Robiginitalea biformata HTCC2501] Length = 361 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 98/318 (30%), Gaps = 57/318 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDT 64 S+ + G A+ +Q + + D L A+ S P ++ + ++ +I++ T Sbjct: 49 SHMGEFLIEGPRALELVQRVSSNDASKLEVGRAQYS--CMPNERMGIVDDLIVYRIKDTT 106 Query: 65 FILEIDRSKRDSLIDKLLFY------KLR--SNV--IIEIQPINGVVLSWN----QEHTF 110 ++L ++ S D D + Y ++R S+ ++ IQ V + Sbjct: 107 YLLVVNASNIDKDWDHISKYNEEIGAEMRNLSDAYSLLAIQGPKAVAAMQSLTSEDLAAI 166 Query: 111 SNSSFIDERFSIADVLLHRTWGHN------------------EKIASDIKTY-------- 144 F F+ ++ G+ E++ Y Sbjct: 167 PFYHFAVGDFAGIPNVIISATGYTGSGGFEIYCKNEEVGQVWERVMEAGAAYGIKPIGLA 226 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ G D ST P +A + + TK ++ E ++ + + RK Sbjct: 227 ARDTLRLEMGYCLYGNDIDDSTS-PLEAGLGWI--TKFTKE-FVNHEALAAQKAAGVERK 282 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255 +P I D IG + L ++ + Sbjct: 283 LVGFEIEQRGIPRKDYTIADADGQPIGRVTSGTMSPSLNRGIGLGYVPVEFAAPGTTVNI 342 Query: 256 ALTVHGVRVKASFPHWYK 273 + V P +YK Sbjct: 343 QIRNKNVPATIVKPPFYK 360 >gi|325284163|ref|YP_004256704.1| Aminomethyltransferase [Deinococcus proteolyticus MRP] gi|324315972|gb|ADY27087.1| Aminomethyltransferase [Deinococcus proteolyticus MRP] Length = 393 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 43/282 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTF 65 S+ + G A+ FLQ + DV L A + L +G ++ I + E + Sbjct: 93 SHMGQFRFRGPGALDFLQHVTPNDVSKLKPGRAHYN-WLPAEEGGLVDDIYIYQAGEQDY 151 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFS 111 ++ ++ L +V + + + V+++ T Sbjct: 152 LMVVNAGNIAKDWAHLQALAAGYDVQMTDESDDWVLIAVQGPKAAATLNEFTDADLLTAK 211 Query: 112 NSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPST 164 +SF R DV RT E K + L + GI Sbjct: 212 RNSFFPGRLLDHDVFFARTGYTGEDGFEVFVKAPEGEALWDAL-LASGIAPAG--LGARD 268 Query: 165 IFPHDALMDLLNGISLTKGCYI----------GQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +A L G ++ + + + R + R++ + + Sbjct: 269 TLRLEAGF-PLYGHEFSENIHPLSSTYSWVVKDKPYLGRTKMDEAPRQKLIGLKLDKIPV 327 Query: 215 PSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250 G P++ +G + A+A+ +D D + Sbjct: 328 REGYPVMLGGENVGVVTSGSTSPTLGHPIAMALVDVDAADAS 369 >gi|295836402|ref|ZP_06823335.1| glycine cleavage system T protein [Streptomyces sp. SPB74] gi|295826004|gb|EFG64604.1| glycine cleavage system T protein [Streptomyces sp. SPB74] Length = 377 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 95/298 (31%), Gaps = 57/298 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G A L A++ + ++ AR + I G IL ++ + DT Sbjct: 55 LSHMGEITLTGPQAADLLDFALVGN-IGSVKEGRARYTMICREDGGILDDLIVYRTGADT 113 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100 +++ + S +++D L Y L + I ++G+ Sbjct: 114 YLVVANASNAQTVLDALRERAAGFDADVRDDRDAYALLAVQGPAAPGILAKITEADLDGL 173 Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143 + + R A + WG + + Sbjct: 174 KYYAGLPGSVGGVDVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGAGMVPCGLAC 233 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + ++ P DA + + + K G ++G+ + + Sbjct: 234 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKTSNGGRFVGRAALEAAAEKAA 290 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 RK +I +P +G ++ +G + L A+A +D A Sbjct: 291 STPPRKLVGLIAAGRRVPRAGYAVVAGGQAVGEVTSGAPSPTLGKPVAMAYVDATHAA 348 >gi|148975471|ref|ZP_01812342.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3] gi|145964899|gb|EDK30150.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3] Length = 377 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 106/310 (34%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L++++ D++ LP R + QG I+ +++ + D Sbjct: 59 SHMGQLRLHGENAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + + ID L + L ++V +E+ ++ + + + F + Sbjct: 118 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 176 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 177 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTVEAEVEWIGLGARDSLRLE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D +T +L+ + + G + G +++ +I +++ RKR Sbjct: 237 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 296 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + + ++G + ++A R D + + Sbjct: 297 LVGQTKAPVREGAELFDAEGNKVGVVTSGTAGPNAGKPVSMAYVRTDLAAIGTEVFAEVR 356 Query: 259 VHGVRVKASF 268 + + Sbjct: 357 GKKLPMTVEK 366 >gi|108803610|ref|YP_643547.1| glycine cleavage system T protein [Rubrobacter xylanophilus DSM 9941] gi|108764853|gb|ABG03735.1| glycine cleavage system T protein [Rubrobacter xylanophilus DSM 9941] Length = 442 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A L+ ++ +VL + R S + G ++ + K ++ F Sbjct: 51 LSSMGQIDVKGPGAERLLRRLLVNEVLDMQPGQLRYSTMCNEAGGVVDDVTVYKFSDEHF 110 Query: 66 ILE---------------------------------------IDRSKRDSL-----IDKL 81 ++ + R + + ++++ Sbjct: 111 MVVASSAPRLKSYRWIREHAEGSSAYVTDMTAGIALLAVQGPLSRPLLEGVVEGAELERM 170 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 F++ + + + + E + D+ + D LL R E + Sbjct: 171 RFFR-FAACRVGEVEVIVSRSGYTGELGYEVYVPADQAREVWDFLLERG-KEFELKPYGV 228 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + LRI + D P ++ I K +IG+E + +Q R I R Sbjct: 229 EAMQSLRIEKALPLYGPDISEEHT-PFHVGLERW--IRFEKPDFIGREALLGVQRRGIER 285 Query: 202 KRPMIITGTDDLPPSGSPIL-----TDDIEIGTLGVVVGKKALAIARIDK 246 + ++ ++ +G I E+ G G A+ ++ Sbjct: 286 RWVGLVLESEVPASNGDAIYSIADVASYREVIETGAEAGHYEEALLPGER 335 >gi|73538631|ref|YP_298998.1| glycine cleavage system T protein [Ralstonia eutropha JMP134] gi|72121968|gb|AAZ64154.1| Glycine cleavage system T protein [Ralstonia eutropha JMP134] Length = 383 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 104/323 (32%), Gaps = 65/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + V G A FL ++ D+ L A S +L +G ++ ++ + ++ F Sbjct: 56 SHMCALDVRGTDARAFLGRLLANDIGKLKSPGKALYSCMLNREGGVIDDLVVYYLSDECF 115 Query: 66 ILEIDRSKRDSLIDKLLFYKL----------RSN--VIIEIQPINGVVLSWNQEHTFSNS 113 + ++ ID + + R V +++ + + + Sbjct: 116 RIVLNAQAASRDIDWMRTQIVESGCSVTLVPRRQDLVTDDVEALAMIAVQGPNAREKVFR 175 Query: 114 SFIDERFS---------------IADVLLHRTWGHNEK---------------------- 136 + R + + ++L RT E Sbjct: 176 AMPSTRAADKVKPFNSCFVHDAVVGALMLARTGKTGEDGFEITMLAKHAVHVWDALRSSG 235 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRI 194 A+ + LR+ G+ P D P T P D + + K ++G+ + +R Sbjct: 236 ICAAGFHAWDTLRLEAGMHVPGRDMGPQTS-PFDVGLGWSVDLG-EKRDFVGKAALQARA 293 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGK------KALAIARIDKV 247 Q ++ + G+ + + SP+++ + IG + ALA+ D + Sbjct: 294 QASQLV---GLAFEGSGAVARTQSPVMSLEGEVIGKVTSGTYSPTLQMAIALALVSPD-I 349 Query: 248 DHAIKKGMALTVHGVRVKASFPH 270 + + V K P Sbjct: 350 KLGSSVSVEVYSKRVSAKVVRPP 372 >gi|167626558|ref|YP_001677058.1| glycine cleavage system aminomethyltransferase T [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189039314|sp|B0TZJ8|GCST_FRAP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|167596559|gb|ABZ86557.1| glycine cleavage system T protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 358 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 44/302 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + GK A FL+ I+ DV L A+ +L + I+ + KI+ + F Sbjct: 49 SHMLAVDIQGKDAEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------EHTFSN-------- 112 + ++ R+S + +V I Q +V +HT + Sbjct: 109 IVVNAGNRESDVAWFRENSQDLDVKITPQQNLAIVAVQGPKAVEIVKHTVTTEVAEEIAK 168 Query: 113 ---------SSFIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRIN 150 S+++ R +++A + + LR+ Sbjct: 169 LKPFTFKFFSNWMFARTGYTGEDGFEIMLPADQVADFWDNLLENGAEPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ +D T P + + +S +IG++ + I K ++ + Sbjct: 229 AGMHLYGSDMNT-TTTPLERGLGWSVDLSDENRDFIGKKAYLTKKSHGITTKWTGVVLKS 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIK-KGMALTVHGVR 263 + +G I D+ E G + ALA + + + +G L V V+ Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIALAYVPKEGANPIVNIRGKELEVELVK 347 Query: 264 VK 265 K Sbjct: 348 AK 349 >gi|190575517|ref|YP_001973362.1| glycine cleavage system aminomethyltransferase T [Stenotrophomonas maltophilia K279a] gi|229807554|sp|B2FR21|GCST_STRMK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|190013439|emb|CAQ47074.1| putative aminomethyltransferase [Stenotrophomonas maltophilia K279a] Length = 370 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F Sbjct: 50 SHMTVVDLRGDQVRPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 + ++ S R+ + L V +E +P ++ + Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVSVEQRPDLAILAVQGPQA 152 >gi|261345604|ref|ZP_05973248.1| glycine cleavage system T protein [Providencia rustigianii DSM 4541] gi|282566084|gb|EFB71619.1| glycine cleavage system T protein [Providencia rustigianii DSM 4541] Length = 364 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ +++D + Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDIAKLTIKGRALYTGMLNASGGVIDDLIVYYLDDDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117 L ++ + R+ ++ + + V I ++ ++ T + + I Sbjct: 110 RLVVNSATREKDLEWIEEHAKGYAVEITVRDDLALLAVQGPHAQQKVHSLLTDAQCAAIQ 169 Query: 118 ERFSIADVLL----------------------------HRTWGHNEKIASDIKTYHELRI 149 + V R + + + LR+ Sbjct: 170 DMKPFYGVQTGDLFVATTGYTGEKGYEIAMPKEQVVEFWRKLLNAGVHPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D +I P A M +IG+E + +++ + + + I Sbjct: 230 EAGMNLYGQDM-DESISPLAANMGWTIAWEPQDRQFIGREALEKLREQGTEK--LVGIVM 286 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTV- 259 + ++ E+G L V +A+AR V + I+ + + Sbjct: 287 REKGILRAEQVIRFTDELGKLQQGVITSGTFSPTLGFSIALAR---VPNDIQSSAIVEIR 343 Query: 260 -HGVRVKASFP 269 + V+ P Sbjct: 344 HREMPVEVVKP 354 >gi|156354936|ref|XP_001623436.1| predicted protein [Nematostella vectensis] gi|156210133|gb|EDO31336.1| predicted protein [Nematostella vectensis] Length = 373 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 55/307 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ GK FL+ ++ ADV L S G I +I+K+ +D + + Sbjct: 56 KLHGKDRTKFLEDLVVADVQGLQSNTGTLSLFTNDNGGIRDDLIINKL-DDVIYVVSNAG 114 Query: 73 KRDSLIDKLLFYKLRS-----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS------ 121 D + L +L + +V +EI +V + +D S Sbjct: 115 CADKITQHLK-DRLDAVSGNLDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFMH 173 Query: 122 --------IADVLLHR--------------------------TWGHNEKIASDIKTYHEL 147 + DV + R + E + + L Sbjct: 174 GVSTSVYGLKDVRVTRCGYTGEDGFELSVDKDRVVDLCRSLMSRQEAEVKLAGLGARDSL 233 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206 R+ G+ D P +A++ G + + G +++ + Q ++ ++R + Sbjct: 234 RLEAGLCLYGNDI-DEDTTPVEAVLVWTIGKRRRAEASFPGAKIILQ-QIKDKPKRRRVG 291 Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 + +G+ +L E+G + K+ +A+A I I + L+V+ Sbjct: 292 LVSAGPPARAGTKVLDGEGQEVGVVTSGCPSPSSKQNIAMAYISTPQSKIGTALQLSVYK 351 Query: 262 VRVKASF 268 +V A+ Sbjct: 352 KKVPATV 358 >gi|332830582|gb|EGK03196.1| aminomethyltransferase [Dysgonomonas gadei ATCC BAA-286] Length = 364 Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A FL+ +++ DV +L A+ SAI+ QG I+ ++ E + ++ Sbjct: 49 SHMGEIWVKGPRAEAFLRRMMSNDVASLEIGKAQYSAIINDQGGIVDDIIVYHYEPEKYM 108 Query: 67 LEIDRSKRD 75 L ++ S + Sbjct: 109 LVVNASNIE 117 >gi|108803319|ref|YP_643256.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941] gi|108764562|gb|ABG03444.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 440 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A L+ ++ +VL + R S + G ++ + K ++ F Sbjct: 51 LSSMGQIDVKGPGAERLLRRLLVNEVLDMQPGQLRYSTMCNEAGGVVDDVTVYKFSDEHF 110 Query: 66 ILE---------------------------------------IDRSKRDSL-----IDKL 81 ++ + R + + ++++ Sbjct: 111 MVVASSAPRLKSYRWIREHAEGSSAYVTDMTAGIALLAVQGPLSRPLLEGVVEGAELERM 170 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 F++ + + + + E + D+ + D LL R E + Sbjct: 171 RFFR-FAACRVGEVEVIVSRSGYTGELGYEVYVPADQAREVWDFLLERG-KEFELKPYGV 228 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + LRI + D P ++ I K +IG+E + +Q R I R Sbjct: 229 EAMQSLRIEKALPLYGPDISEEHT-PFHVGLERW--IRFEKPDFIGREALLGVQRRGIER 285 Query: 202 KRPMIITGTDDLPPSGSPIL-----TDDIEIGTLGVVVGKKALAIARIDK 246 + ++ ++ +G I E+ G G A+ ++ Sbjct: 286 RWVGLVLESEVPASNGDAIYSIADVASYREVIETGAEAGHYEEALLPGER 335 >gi|315505112|ref|YP_004083999.1| glycine cleavage system t protein [Micromonospora sp. L5] gi|315411731|gb|ADU09848.1| glycine cleavage system T protein [Micromonospora sp. L5] Length = 375 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 51/275 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V G A L + + +P AR + + G +L + ++ + + Sbjct: 55 LSHMGQLEVSGPEAPTALNYALVGHLSAVPIGGARYTMLCDAAGGVLDDLVAYRLASNRY 114 Query: 66 ILEIDRS----KRDSLIDKLLFYKLRS------NVIIEIQPINGVVLSWNQEHT------ 109 +L ++ ++ + Y + II +Q + T Sbjct: 115 LLVVNAINTRVVHAAIRTRCADYAAWAADRTNERAIIAVQGPRAAPIVEALTGTGLTRLR 174 Query: 110 --FSNSSFIDERFSIADVLLH----------------RTWGHN-------EKIASDIKTY 144 + ID R ++ + RTW + + Sbjct: 175 YYTAALLDIDGRPAVVARTGYTGEDGFELLVHAEDAVRTWEAALVAGRRHGLTPTGLACR 234 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LRI G+ + + P DA + + +S K G ++G+ ++ + R+ Sbjct: 235 DTLRIEAGMPLYGAEIGRD-VTPFDAGLGRV--VSFVKPGDFVGRAALAEAHKSGVTRRL 291 Query: 204 PMIITGTDDLPPSGSPILT------DDIEIGTLGV 232 ++ +P +G ++T +G + Sbjct: 292 VGLVASGQRIPRAGQQVVTLTDDGHGADPVGLITS 326 >gi|256828473|ref|YP_003157201.1| glycine cleavage system T protein [Desulfomicrobium baculatum DSM 4028] gi|256577649|gb|ACU88785.1| glycine cleavage system T protein [Desulfomicrobium baculatum DSM 4028] Length = 360 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 89/281 (31%), Gaps = 51/281 (18%) Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86 +T ++ TL R +L +G +L ++ +++ + ++L ++ + DS + + L Sbjct: 72 VTHNLATLAPGKCRYGFLLNEKGGVLDDLIVYRLDTEKYMLVVNGACIDSDFAWIKSH-L 130 Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---------------------------- 118 +N+ + Q + + +F + I Sbjct: 131 PANLTLVNQSFDIAKIDLQGPESFDVLARIMPADWNSLGYFGFREVEFEGFKVIVSRTGY 190 Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 + A+VL + + + LR+ G+ D P Sbjct: 191 TGELGCEFYLPWGKAEVLWEKLMADEAVRPAGLGARDTLRLEVGLPLYGQDLDMDHT-PV 249 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEI 227 +A G+ ++ YIG+ + +R++ + + + + ++ Sbjct: 250 EAGY---GGMLKSEADYIGKSGL------GSVREKLIGLCIDGRRSARHYDEVYAGEEKV 300 Query: 228 GTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRVKAS 267 G + +L + V + + T+ G R Sbjct: 301 GMVTSGSIAPSLGYCVAMAFVRADMADTESFTIKGPRTTLE 341 >gi|126657632|ref|ZP_01728787.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. CCY0110] gi|126621088|gb|EAZ91802.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. CCY0110] Length = 369 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 103/297 (34%), Gaps = 45/297 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ P LQ+++ +D+ L A+ + +L P G I+ +I E+ + Sbjct: 58 SHMGKFTLEGEGLFPMLQSLVPSDLNRLTPGKAQYTVLLNPDGGIIDDIIIYCQGEEKAV 117 Query: 67 LEIDRSKRDSLIDK---------LLFYKL-RSNVIIEIQPINGV---------------V 101 + ++ + +D + F L + V++ IQ Sbjct: 118 IIVNAATKDKDKKWILSNLGSTNINFTDLSQDKVLLAIQGPETAETLQPLVKADLTQLSF 177 Query: 102 LSWNQEHTFSNSSFIDER------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 +FI L R+ + LR+ Sbjct: 178 FGHTDTKVLGYPAFIARTGYTGEDGFEVMISPEGGQELWRSLLETGVTPCGLGARDTLRL 237 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + D T P +A + L + KG ++G+EV+ + +++R + + Sbjct: 238 EAAMSLYGQDIDDHTT-PLEAGLKWLVHLD-KKGKFMGREVLEKQAEEG-VKRRLVGLEM 294 Query: 210 TD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 + G P++++D +G + KA+A+A + + I + + + G Sbjct: 295 EGRHIARHGYPVVSEDKIVGEVTSGTIGPTVGKAIALAYVPRSLSKIGTTVEVEIRG 351 >gi|294142303|ref|YP_003558281.1| glycine cleavage system T protein [Shewanella violacea DSS12] gi|293328772|dbj|BAJ03503.1| glycine cleavage system T protein [Shewanella violacea DSS12] Length = 364 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 97/309 (31%), Gaps = 48/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVTGTDACVFLRKLLANDVAKLKIPGKALYGGMLDHSAGVIDDLITYYLTDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123 + ++ + R+ + + +V+I +P ++ +S D+ ++ Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVISERPELAMIAVQGPNAKAKAASVFNADQNAAVE 169 Query: 124 DV----------------------------------LLHRTWGHNEKIASDIKTYHELRI 149 + +L + + LR+ Sbjct: 170 GMKPFFGVQSGSLFIATTGYTGETGYEIIVPEAEAEVLWQALLEAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M + G+E ++ I+ + +I+ Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPEDRNFNGREALAAIKAAGTEKMVGLIMEA 288 Query: 210 TDDLPPSGSPILTDDI--------EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 + P S TD GT +G ++A+AR+ + + + Sbjct: 289 KGVIRPGMSIFFTDGEGNEQQGIITSGTFSPTLG-YSIAMARVPRSIGD-TAEVEMRKKR 346 Query: 262 VRVKASFPH 270 V VK P Sbjct: 347 VTVKVIKPS 355 >gi|167969393|ref|ZP_02551670.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis H37Ra] gi|215427584|ref|ZP_03425503.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T92] gi|215431145|ref|ZP_03429064.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis EAS054] gi|219558190|ref|ZP_03537266.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T17] gi|254232364|ref|ZP_04925691.1| aminomethyltransferase gcvT (glycine cleavage system T protein) [Mycobacterium tuberculosis C] gi|254551250|ref|ZP_05141697.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187207|ref|ZP_05764681.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis CPHL_A] gi|260201327|ref|ZP_05768818.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T46] gi|294993596|ref|ZP_06799287.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis 210] gi|297634800|ref|ZP_06952580.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis KZN 4207] gi|297731791|ref|ZP_06960909.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis KZN R506] gi|306776463|ref|ZP_07414800.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu001] gi|306780240|ref|ZP_07418577.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu002] gi|306784987|ref|ZP_07423309.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu003] gi|306789354|ref|ZP_07427676.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu004] gi|306803949|ref|ZP_07440617.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu008] gi|306968347|ref|ZP_07481008.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu009] gi|306972575|ref|ZP_07485236.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu010] gi|307080283|ref|ZP_07489453.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu011] gi|307084870|ref|ZP_07493983.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu012] gi|313659125|ref|ZP_07816005.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis KZN V2475] gi|54037176|sp|P64221|GCST_MYCBO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54041302|sp|P64220|GCST_MYCTU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|124601423|gb|EAY60433.1| aminomethyltransferase gcvT (glycine cleavage system T protein) [Mycobacterium tuberculosis C] gi|308215102|gb|EFO74501.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu001] gi|308326856|gb|EFP15707.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu002] gi|308330209|gb|EFP19060.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu003] gi|308334046|gb|EFP22897.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu004] gi|308349329|gb|EFP38180.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu008] gi|308354039|gb|EFP42890.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu009] gi|308357981|gb|EFP46832.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu010] gi|308361915|gb|EFP50766.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu011] gi|308365578|gb|EFP54429.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu012] Length = 367 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 349 GRAVECQVVCPP 360 >gi|320108243|ref|YP_004183833.1| glycine cleavage system T protein [Terriglobus saanensis SP1PR4] gi|319926764|gb|ADV83839.1| glycine cleavage system T protein [Terriglobus saanensis SP1PR4] Length = 375 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 104/321 (32%), Gaps = 69/321 (21%) Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I++ G A+ Q ++ D L A SA+LTP+G + ++ K+ E+ Sbjct: 54 SHMGDIQLRGPGSLDAV---QKLLMNDASKLQIGQAHYSAMLTPEGTFVDDVVLHKLSEN 110 Query: 64 TFILEIDRSKRDSLIDKLL----------------FYKLRSNVII--------------- 92 +++ I+ R+ + + Y + + I Sbjct: 111 DYLIVINAGTREKDVQWVRQTIGQMPSTHINDYSDMY---TQIAIQGPRSIDVLQKLTDT 167 Query: 93 -------------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK--- 136 ++ + V+++ + + + Sbjct: 168 DLSTIKNYWFTWGKVAGLYNVMIARTGYTGEDGFEIYIPSDEATSARVWQEIFAAGEEFG 227 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + + + LR+ + + TI +A + + + ++G+ + IQ Sbjct: 228 ILPCGLGARNTLRLESSMALYGHEI-SDTINVFEANLGRYCKLD-KESDFVGKSALQTIQ 285 Query: 196 HRNIIRKRPMIITGTD-DLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKV 247 + +++ + + + + G P+ T D IG + ALA + Sbjct: 286 NAGGPKRKLVGLEIVERGIARDGYPVTTLDGTVIGEVTSGSPSVTLKKNIALAYVPVKYT 345 Query: 248 DHAIKKGMALTVHGVRVKASF 268 A+ +A+T+ VKA Sbjct: 346 --ALDTEVAVTIRNQPVKAKV 364 >gi|308373355|ref|ZP_07431981.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu005] gi|308374525|ref|ZP_07436371.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu006] gi|308375813|ref|ZP_07445189.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu007] gi|308337854|gb|EFP26705.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu005] gi|308341613|gb|EFP30464.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu006] gi|308345020|gb|EFP33871.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu007] gi|323719111|gb|EGB28256.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CDC1551A] Length = 364 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 52 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 111 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 112 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 171 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 172 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 231 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 232 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 287 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 288 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 345 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 346 GRAVECQVVCPP 357 >gi|15609348|ref|NP_216727.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis H37Rv] gi|15841702|ref|NP_336739.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis CDC1551] gi|31793390|ref|NP_855883.1| glycine cleavage system aminomethyltransferase T [Mycobacterium bovis AF2122/97] gi|121638092|ref|YP_978316.1| glycine cleavage system aminomethyltransferase T [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662028|ref|YP_001283551.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis H37Ra] gi|148823418|ref|YP_001288172.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis F11] gi|224990586|ref|YP_002645273.1| glycine cleavage system aminomethyltransferase T [Mycobacterium bovis BCG str. Tokyo 172] gi|253798724|ref|YP_003031725.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 1435] gi|254365007|ref|ZP_04981053.1| aminomethyltransferase gcvT (glycine cleavage system T protein) [Mycobacterium tuberculosis str. Haarlem] gi|289443718|ref|ZP_06433462.1| glycine cleavage system T protein [Mycobacterium tuberculosis T46] gi|289447839|ref|ZP_06437583.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CPHL_A] gi|289554002|ref|ZP_06443212.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 605] gi|289570327|ref|ZP_06450554.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T17] gi|289750805|ref|ZP_06510183.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T92] gi|289754319|ref|ZP_06513697.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis EAS054] gi|1237064|emb|CAA94254.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T protein) [Mycobacterium tuberculosis H37Rv] gi|13881958|gb|AAK46553.1| glycine cleavage system T protein [Mycobacterium tuberculosis CDC1551] gi|31618982|emb|CAD97087.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T protein) [Mycobacterium bovis AF2122/97] gi|121493740|emb|CAL72215.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T protein) [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134150521|gb|EBA42566.1| aminomethyltransferase gcvT (glycine cleavage system T protein) [Mycobacterium tuberculosis str. Haarlem] gi|148506180|gb|ABQ73989.1| aminomethyltransferase [Mycobacterium tuberculosis H37Ra] gi|148721945|gb|ABR06570.1| aminomethyltransferase gcvT (glycine cleavage system T protein) [Mycobacterium tuberculosis F11] gi|224773699|dbj|BAH26505.1| glycine cleavage system aminomethyltransferase T [Mycobacterium bovis BCG str. Tokyo 172] gi|253320227|gb|ACT24830.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 1435] gi|289416637|gb|EFD13877.1| glycine cleavage system T protein [Mycobacterium tuberculosis T46] gi|289420797|gb|EFD17998.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CPHL_A] gi|289438634|gb|EFD21127.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 605] gi|289544081|gb|EFD47729.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T17] gi|289691392|gb|EFD58821.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T92] gi|289694906|gb|EFD62335.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis EAS054] gi|326903824|gb|EGE50757.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis W-148] gi|328458487|gb|AEB03910.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 4207] Length = 379 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 361 GRAVECQVVCPP 372 >gi|325914118|ref|ZP_08176471.1| aminomethyltransferase [Xanthomonas vesicatoria ATCC 35937] gi|325539621|gb|EGD11264.1| aminomethyltransferase [Xanthomonas vesicatoria ATCC 35937] Length = 369 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 1/142 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A S +L PQG ++ ++ + ED F Sbjct: 50 SHMTVVDLHGARVRDFLRYLLANSVDKLKVSGKALYSCMLNPQGGVIDDLIVYFMAEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + R V +E + ++ +D A Sbjct: 110 RLVVNAATREKDLHWIGEQAARFEVRVEERSDFAMIAVQGPNACAKVIDLLDPSDVTATS 169 Query: 126 LLHRTWGHNEKIASDIKTYHEL 147 L R + I + Sbjct: 170 KLGRFAALQTRSRDGIDLFLAR 191 >gi|226323775|ref|ZP_03799293.1| hypothetical protein COPCOM_01550 [Coprococcus comes ATCC 27758] gi|225207959|gb|EEG90313.1| hypothetical protein COPCOM_01550 [Coprococcus comes ATCC 27758] Length = 362 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 106/310 (34%), Gaps = 56/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ LQ I+T D + AR S + G + ++ K +D + Sbjct: 51 SHMGEILCEGKDALVNLQHILTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRSDDHYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH--------TFSN----- 112 + ++ + +D +L ++ V ++ G + + T N Sbjct: 111 IVVNAANKDKDYQWMLAHQ-SGEVTFTDVSDQYGQIALQGPKAMEILRKLTTEENIPKKY 169 Query: 113 -SSFIDERFSIADVLLHRTWGHNEK-----IASDIKT--YH------------------- 145 + + ++ +T E +ASD+ + Sbjct: 170 YHAVFGAEVAGMPCIVSKTGYTGEDGVEIYLASDLAEKMWETLLEAGKEEGLIPCGLGAR 229 Query: 146 -ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR--K 202 LR+ + + + P + ++ G+ + K +IG++ + + R + + Sbjct: 230 DTLRMEAAMPLYGHEM-DDEVSPLETGLNF--GVKMKKDEFIGKKAI---EDRGTPKIER 283 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 + +TG + + D +IG +A+A +D AI + Sbjct: 284 IGLKVTGRG-IIREHQDLYAGDQKIGHTTSGTHCPYLGYPIAMALVDAGSVAIGDKVEAD 342 Query: 259 VHGVRVKASF 268 V G RV+A Sbjct: 343 VRGRRVEAEV 352 >gi|241668989|ref|ZP_04756567.1| glycine cleavage system aminomethyltransferase T [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877521|ref|ZP_05250231.1| glycine cleavage system aminomethyltransferase T [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843542|gb|EET21956.1| glycine cleavage system aminomethyltransferase T [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 358 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 44/302 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + GK A FL+ I+ DV L A+ +L + I+ + KI+ + F Sbjct: 49 SHMLAVDIQGKDAEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------EHTFSN-------- 112 + ++ R+S + +V I Q +V +HT + Sbjct: 109 IVVNAGNRESDVAWFRENSQDLDVKITPQQNLAIVAVQGPKAVEIVKHTVTTEVAEEIAK 168 Query: 113 ---------SSFIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRIN 150 S+++ R +++A + + LR+ Sbjct: 169 LKPFTFKFFSNWMFARTGYTGEDGFEIMLPADQVADFWDNLLENGAEPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ +D T P + + +S +IG++ + I K ++ + Sbjct: 229 AGMHLYGSDMNT-TTTPLERGLGWSVDLSDENRDFIGKKAYLAKKSHGITTKWTGVVLKS 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIK-KGMALTVHGVR 263 + +G I D+ E G + ALA + + + +G L V V+ Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIALAYVPKEGANPIVNIRGKELEVELVK 347 Query: 264 VK 265 K Sbjct: 348 AK 349 >gi|215446440|ref|ZP_03433192.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T85] Length = 367 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTEVLTALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 349 GRAVECQVVCPP 360 >gi|146312964|ref|YP_001178038.1| glycine cleavage system aminomethyltransferase T [Enterobacter sp. 638] gi|166989728|sp|A4WE57|GCST_ENT38 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|145319840|gb|ABP61987.1| aminomethyltransferase [Enterobacter sp. 638] Length = 364 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119 L ++ + R+ + + + + V I ++ ++ + + F DE+ Sbjct: 110 RLVVNSATREKDLSWISQHAEKYAVEITVRDDLSLIAVQGPNAQAKAATLFTDEQ 164 >gi|108758135|ref|YP_631249.1| glycine cleavage system aminomethyltransferase T [Myxococcus xanthus DK 1622] gi|108462015|gb|ABF87200.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622] Length = 362 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 90/307 (29%), Gaps = 48/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A+ + A+I+ D+ + A + +L +G + + + + Sbjct: 52 SHMGEVEFSGPGALDTVNALISNDLARVADGQAVYAGLLDERGTFVDDVVAYRFSPERIF 111 Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTF----SNSS 114 + ++ S R+ + + + RS+ I +Q L T Sbjct: 112 ICVNSSNREKDVAWMKAHAKGVAPVDRSDDYAQIAVQGPKATGLVQRLTKTDLSKIGTYR 171 Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF------- 160 F + + A L+ RT E + + L + G D Sbjct: 172 FAEGEVAGAKCLISRTGYTGEDGFELYSAAGDAVALWDAL-LTEGQQDGVKPCGLGARDS 230 Query: 161 -------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + +A + + + L K +IG+E + + + RK Sbjct: 231 LRTEMKYALYGNDIDDQHTALEAGLGWI--VKLDKAAFIGKEALVAQKAAGVKRKLVGFE 288 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261 +P G IL D +G + V + + + + Sbjct: 289 LTGSGIPRHGYAILKDGAPVGEVTSGTMGPTVKKAIGIGYVPTELSTEGSTFDVDIRGRA 348 Query: 262 VRVKASF 268 V Sbjct: 349 VPAVVVK 355 >gi|269966653|ref|ZP_06180732.1| aminomethyltransferase [Vibrio alginolyticus 40B] gi|269828720|gb|EEZ82975.1| aminomethyltransferase [Vibrio alginolyticus 40B] Length = 376 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 103/310 (33%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117 + ++ + + I L + L S V +E ++ + S F+D Sbjct: 117 VVVNAACKAQDIAHLQAH-LPSGVELETIEDRALLAIQGPKAAAVLVRFAPEVSEMLFMD 175 Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R A+ L + +E + LR+ Sbjct: 176 IRKVDILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 295 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G + D ++IG + ++ R D + + Sbjct: 296 LVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTEVFAEVR 355 Query: 259 VHGVRVKASF 268 + + Sbjct: 356 GKMLPMTVEK 365 >gi|254283104|ref|ZP_04958072.1| sarcosine dehydrogenase [gamma proteobacterium NOR51-B] gi|219679307|gb|EED35656.1| sarcosine dehydrogenase [gamma proteobacterium NOR51-B] Length = 817 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 99/323 (30%), Gaps = 69/323 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ S V G+ A +L I T +V +P + + L +G I ++++EED+F Sbjct: 487 LSSFSKFLVQGRDAAKYLNWICTNEVD-VPNGRSVYTQWLNERGTIEADLTVTRLEEDSF 545 Query: 66 ILEIDRSKRDSLIDKLL----------------FYKL--------RS---NVIIEIQPIN 98 ++ + L Y + R+ + Sbjct: 546 LVVTAAFTYTHVFYWLKQNIRDGEFVTVTDVTTTYGVLSVQGPSSRALLEKMSGSPLSNE 605 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDI 141 W ++ ++ R S L + +E +A Sbjct: 606 IHPFGWMRDIDIGYATVKALRISYVGELGWELYIPSEYLAYIFDELMEAGDEFGLRLCGY 665 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQE-VVSRIQ 195 + LR+ + D +G+ G ++G E + R Sbjct: 666 HALNSLRLEKAFREWGHDIGSDD-------DQRESGLMFAAKLEKAGGFLGAEALQQRRN 718 Query: 196 HRNIIRKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDK- 246 + + KR ++ + L PIL + +G G AL R D Sbjct: 719 NDQKLTKRLVQFLMKSPEPLLYHNEPILCNGERVGYTSSAAYGHTLGGSVALGYVRHDAG 778 Query: 247 VDHAI--KKGMALTVHGVRVKAS 267 VD + + + V GVR +A Sbjct: 779 VDGDLISQSKFEIVVAGVRHEAH 801 >gi|118602893|ref|YP_904108.1| glycine cleavage system aminomethyltransferase T [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567832|gb|ABL02637.1| aminomethyltransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 358 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ S + G A FLQ +I DV L A S +L G ++ +I +++ + Sbjct: 49 SHMSVVDFKGIEAKAFLQILIANDVDKLKIQGKALYSCMLNESGGVIDDLIIYYQDDEYY 108 Query: 66 ILEIDRSKRD 75 + I+ + Sbjct: 109 RIVINAGTAE 118 >gi|294631503|ref|ZP_06710063.1| glycine cleavage system T protein [Streptomyces sp. e14] gi|292834836|gb|EFF93185.1| glycine cleavage system T protein [Streptomyces sp. e14] Length = 375 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 96/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ D+ ++ AR + I G IL ++ ++ E Sbjct: 56 LSHMGEIAVTGPEAAALLNHALV-GDIASVGVGRARYTMICREDGGILDDLIVYRLAETE 114 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +++ + S ++D L + + + ++ S D + Sbjct: 115 YLVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALLAVQGPASPAILQSLTDADLAGL 174 Query: 124 -------------DVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 L+ RT E A K + Sbjct: 175 KYYAGLPGTVAGVQALIARTGYTGEDGFELFVAPADAEKLWQALTDAGADAGLIPCGLSC 234 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR- 201 LR+ G+ + ++ P DA + + + K G ++G+E + R R Sbjct: 235 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFGKEGDFVGREALRRAAERAAENP 291 Query: 202 -KRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 + + + +P +G P++ IG + L A+A +D A Sbjct: 292 PRVLVGLVAEGRRVPRAGYPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 346 >gi|271963294|ref|YP_003337490.1| glycine cleavage system aminomethyltransferase T [Streptosporangium roseum DSM 43021] gi|270506469|gb|ACZ84747.1| glycine cleavage system aminomethyltransferase T [Streptosporangium roseum DSM 43021] Length = 362 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 53/305 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A L + + L AR + I+ P G +L ++ ++ ++ F Sbjct: 49 LSHMGEIFVTGPQAGEALDYALVGHLSALEPGRARYTMIVDPSGGVLDDLIVYRLADEEF 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV---------------------------IIEIQPIN 98 ++ + S + +L R+ + ++ Sbjct: 109 MVVANASNYPRVAAELTE---RAKAFDAAVEDRSEQYALVAVQGPHSRAILGELTDADLD 165 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDI 141 G+ T + + R + + + + + Sbjct: 166 GLKYYAGLPATVAGREALVARTGYTGEDGFELFVAADDAEPLWAALTEAGEPYGLLPAGL 225 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200 LR+ G+ + + + P DA + + + K G ++G+ + ++ Sbjct: 226 SARDTLRLEAGMPLYGNEL-SADLTPFDAGLGRV--VRFDKPGDFVGRAALEPLKDVPPS 282 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALT 258 R+ ++ +P G P++ D +G + ++L + VD + G+A+ Sbjct: 283 RRLVGLVATGRRVPRHGYPVVSADGAVVGEVTSGAPSQSLGRPIAMAYVDGDLSTGLAVD 342 Query: 259 VHGVR 263 + G R Sbjct: 343 IRGSR 347 >gi|225386602|ref|ZP_03756366.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme DSM 15981] gi|225047300|gb|EEG57546.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme DSM 15981] Length = 366 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 54/309 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A+ L ++T D + AR S + +G ++ ++ K+ +D + Sbjct: 56 SHMGEIILKGPDALKNLNHLLTNDYTVMACGQARYSPMCNEEGGVVDDLIVYKVRDDCYF 115 Query: 67 LEIDRSKRDSLIDKLL--------------------------FYKLRSNVIIEIQ----- 95 + ++ + +D + LR V E Sbjct: 116 IVVNAANKDKDYAWMKAHVSGEAQLSDISASVAQLALQGPKAMDILR-KVAREEDIPEKY 174 Query: 96 ---------PINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTY 144 ++S E LL I + Sbjct: 175 YTCKFHCTIDGMDCIISKTGYTGEDGVEIYLASEDAPRLWRLLMEHGRDEGLIPCGLGAR 234 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKR 203 LR+ + + I P +A + + + + K +IG++ + + + + RKR Sbjct: 235 DTLRLEASMPLYGHEM-DDAITPKEAGLGMF--VKMDKEDFIGKKAI---EAKGPLTRKR 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 + + + IG +A+A +D + + V Sbjct: 289 VGLKVTGRGIVREHQAVYAGGEPIGVTTSGTHCPYLGYPVAMALLDIAYKEPGTAVEVDV 348 Query: 260 HGVRVKASF 268 G RV A Sbjct: 349 RGRRVAAEI 357 >gi|221059411|ref|XP_002260351.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193810424|emb|CAQ41618.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 531 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 43/134 (32%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT----------------------------- 33 L N++ +++CG + FLQ++ T D+ Sbjct: 6 LCRLKNRTLVQICGTDSFRFLQSLTTNDLNKIITEKDFSLYKNIPKNVLSSLDGTNSYQL 65 Query: 34 ----LPYKIAR---GSAILTPQGKILLYFLISKI----EEDT---FILEIDRSKRDSLID 79 + +K S L GKIL + + EE+T F ++ + L+ Sbjct: 66 CGHNVNHKKWTKGLPSLFLQNNGKILADCFLYNVKYTNEENTFSLFYMDCNMDASRMLLS 125 Query: 80 KLLFYKLRSNVIIE 93 L KL +V Sbjct: 126 LLEKRKLSCDVHFS 139 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 153 IVDPNTD---FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + D F + P D D LN ++ KGCY+GQE ++R ++ I K Sbjct: 325 VAKGKIDRDAFKFKDLSPFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINK 377 >gi|254373931|ref|ZP_04989413.1| aminomethyltransferase [Francisella novicida GA99-3548] gi|151571651|gb|EDN37305.1| aminomethyltransferase [Francisella novicida GA99-3548] Length = 358 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 47/306 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + ++ R+S + +V I Q +V + Sbjct: 109 IVVNAGNRESDVACFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168 Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150 S ++ R + N + + LR+ Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ + D ST P + + +S +IG++ + + + K ++ T Sbjct: 229 AGMHLYSADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264 + +G I D+ E G + LA A + + + V Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343 Query: 265 KASFPH 270 + P Sbjct: 344 ELVKPK 349 >gi|84514576|ref|ZP_01001940.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella vestfoldensis SKA53] gi|84511627|gb|EAQ08080.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella vestfoldensis SKA53] Length = 812 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 91/318 (28%), Gaps = 64/318 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A FL + +A + L + I ++++ Sbjct: 487 MSSFGKIRVEGRDACAFL-----NHICGAQMDVAVGRIVYTQFLNAKAGIEADVTVTRLS 541 Query: 62 EDTFILEIDRSKRDSLIDKLLF----Y------------KL-------RS---NVIIEIQ 95 E +++ + R + + Y L R+ V Sbjct: 542 ETAYLVVTPAATRLADQTWMQRNLGDYTAVITDVTAGEGVLAVMGPHSRALLQKVSPNDF 601 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------- 145 + QE + R S L + + + H Sbjct: 602 SNDHNPFGTAQEIEIGMALARVHRVSYVGELGWEVYISADMAGHVFEVLHAAGQDMGLKL 661 Query: 146 -------ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 R+ G D +A + + K +IG++ V R + Sbjct: 662 CGMHMMDAARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPVFIGRDAVLRKRDAG 718 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDH 249 + R+ +T L P+L D +G L AL + + + VD Sbjct: 719 LARRLLQFKLTDPAPLLYHNEPVLRDGRVVGHLTSGGYGHHVGAALGMGYVPCAGESVDD 778 Query: 250 AIKKGMALTVHGVRVKAS 267 + + V GVRV A Sbjct: 779 LLASRYEIDVMGVRVVAE 796 >gi|253988640|ref|YP_003039996.1| glycine cleavage system aminomethyltransferase T [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638036|emb|CAR66664.1| aminomethyltransferase (ec 2.1.2.10) (glycine cleavage system protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780090|emb|CAQ83251.1| aminomethyltransferase [Photorhabdus asymbiotica] Length = 367 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ D+ L A + +L G ++ ++ D + Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYFSHDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 + ++ + R+ + + + +V I+++ ++ E S +++ Sbjct: 110 RMVVNSATREKDLAWINEHATHYSVDIQVRDDLALIAIQGPEAQAKVQSLLNDEQKQAIA 169 Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + LR+ Sbjct: 170 GMKPFFGIQADELFIATTGYTGEAGYEIAMPKEQAANFWQKLLSAGIKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D TI P A M +IG+E + R + + ++ Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALERQRKEGTD-QLVGLVMR 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + SG + D E+GTL V +A+AR+ + + + Sbjct: 288 EKGVLRSGLTVSFTD-EMGTLHSGVITSGTFSPTLGFSIALARV-PQGIGEQAIVQIRHR 345 Query: 261 GVRVKASFP 269 + V+ P Sbjct: 346 EMPVQVVKP 354 >gi|297566415|ref|YP_003685387.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946] gi|296850864|gb|ADH63879.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946] Length = 350 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 53/272 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ DV L A+ S + +G ++ + + E+ +++ ++ + Sbjct: 56 VRGPQALDFLQYATLNDVSKLKVGRAQYSMLPNERGGVVDDIYLYRTGEEEYLVVVNAAN 115 Query: 74 RDSLIDKLLF----YKLR------------------SNVIIEIQPINGVVLSWNQEHTFS 111 + L + +R + V+ ++ ++ + S + TF+ Sbjct: 116 IEKDWSHLQRLAEGFSVRLEDASERTGLLAVQGPNAAKVLQKLCDVD--LSSKKKNDTFT 173 Query: 112 NSSFIDE-RFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRINHGIV 154 + R + + + + LR+ G Sbjct: 174 ATVAGKPARLARTGYTGEDGFELFTEATDLRAVWDALLQAGVTPCGLGARDTLRLEAGFP 233 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 + P + + K Y +++ + + + + +P Sbjct: 234 LYGHELT-DETNPRCTPFSWV--VKEHKEFYGKSALLA-----GGCDQVLVGLLLEEGIP 285 Query: 215 PSGSPILTDDIEIGTLGVV----VGKKALAIA 242 G +L E+G + + KK +A+A Sbjct: 286 REGYRVLVGGEEVGHITSGTFSPLIKKGIALA 317 >gi|215403601|ref|ZP_03415782.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis 02_1987] Length = 367 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGR--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 349 GRAVECQVVCPP 360 >gi|55376913|ref|YP_134764.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula marismortui ATCC 43049] gi|55229638|gb|AAV45058.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula marismortui ATCC 43049] Length = 857 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 83/267 (31%), Gaps = 50/267 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 ++V G A F+Q + T D+ + + + + G + +++ +ED ++L Sbjct: 550 MEVIGSDAGEFVQYLCTNDMD-IDVGDVKYTLMCNEGGGVRADITVTRTDEDRYLLLTTG 608 Query: 68 ----------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105 ++ S + K+ S V + + Sbjct: 609 REVGNNHVAWVREQSPDDVVVNDVTSSLAAMVCTGPNARKVLSKVTDVDLSDDAFPFFTS 668 Query: 106 QEHTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASDI-------KTYHELR 148 Q+ N R S A L R W H + + + LR Sbjct: 669 QQFFVKNIPVTALRVSYAGELGWEFYTPSEYGERLWEHIMEAGEEYGIRPYGNGALNSLR 728 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G D P++A + + L +IG+E V+ + I + +T Sbjct: 729 IEKGFRLWGKDLHTEH-NPYEAGLGW--AVDLETD-FIGKEAVAAAADGDNIDHKVACLT 784 Query: 209 GTDDLPPS--GSPILTDDIEIGTLGVV 233 D+ P+L D IG L Sbjct: 785 LDDEDAVVLDNKPVLDGDETIGYLHSA 811 >gi|289758331|ref|ZP_06517709.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T85] gi|289713895|gb|EFD77907.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis T85] Length = 379 Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTEVLTALGLPTEMDYMGY 186 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 361 GRAVECQVVCPP 372 >gi|134142796|gb|ABO61732.1| mitochondrial glycine decarboxylase complex T-protein [Populus tremuloides] Length = 408 Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 86/269 (31%), Gaps = 54/269 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK +PFL+ ++ ADV L + +G + +I+K+ +D + ++ Sbjct: 91 SLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNAG 150 Query: 73 ---------------------------------------KRDSLIDKLLFYKLRSNV--- 90 ++ L L S V Sbjct: 151 CKDKDLAHIEAHMKSFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDL-SKVYFG 209 Query: 91 IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 I INGV + E F S + +A L ++ G + Sbjct: 210 EFRITDINGVRCFINRTGYTGEDGFEISVPSENAVDLAKATLEKSEGKVRLTG--LGARD 267 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D I P +A ++ G +G ++G EV+ + + R Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLNWAIGKRRKAEGGFLGAEVILKQLAEG-PKIRL 325 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + + T P S S I + IG + Sbjct: 326 VGFSSTGPPPRSHSEIQDEKGTSIGEITS 354 >gi|113869555|ref|YP_728044.1| glycine cleavage system aminomethyltransferase T [Ralstonia eutropha H16] gi|123328791|sp|Q0K5P5|GCST_RALEH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|113528331|emb|CAJ94676.1| Aminomethyltransferase [Ralstonia eutropha H16] Length = 375 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 19/126 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G + FL+ ++ +V L A S +L +G ++ ++ ED F Sbjct: 51 SHMCVVDLAGANTRSFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLR-----SNVIIE----------IQPINGVVLSWNQEHTF 110 L ++ S I+ + + R S+V I +QP+ V + T Sbjct: 111 RLVVNASTALGDIEWI---RARNAATGSDVTITPRREDVAPAGVQPLAIVAVQGPNARTK 167 Query: 111 SNSSFI 116 S+F Sbjct: 168 VWSTFP 173 >gi|254284012|ref|ZP_04958980.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B] gi|219680215|gb|EED36564.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B] Length = 371 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 47/290 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A L+A++ AD+ LP A S +L +G +L +I++ +D+F Sbjct: 54 SHMGQVVIRGDVATAELEALVPADLAALPDHHAVYSLLLNQEGGVLDDLIITRWADDSFF 113 Query: 67 LEIDRSKRDSLIDKLLFY-------KL-----------RSN-VIIEIQPINGVVLSWNQE 107 L ++ + + +D L + L R+ V+ + P ++ Sbjct: 114 LVVNADCKVADVDHLRAHLPGCSLEVLENRALLAVQGPRAREVLSALCPDAAELVFMTGV 173 Query: 108 HTFSNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 + + + A+ L + LR+ G Sbjct: 174 EAAIDGVPVYVSCCGYTGEDGFELSIPAAEAERLATLLLDQPGVAPIGLGARDSLRLEAG 233 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKRP-MI 206 + + ++I P A + + G Y G ++++R I +R + Sbjct: 234 LCLYGHEL-SASITPIQAGLKWAIAKARRVDGARPGGYPGAQIINRQWREGIGERRVGLR 292 Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHA 250 + G + IG + V A+A +D Sbjct: 293 VKGKRPVRDGQLVCDQSGQAIGRISSSAFGASVGAPIAMAFVAVDHATAG 342 >gi|315231347|ref|YP_004071783.1| aminomethyltransferase [Thermococcus barophilus MP] gi|315184375|gb|ADT84560.1| aminomethyltransferase [Thermococcus barophilus MP] Length = 397 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ + T D+ P + +L +G + L+ + DT++ Sbjct: 49 SHMGEIFFRGKDALKFLQYVTTNDISRPPAISGTYTLVLNERGAVKDETLVFNMGNDTYM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRS 88 + D + L R+ Sbjct: 109 MVCDSDAFEKLYAWF-MSIKRA 129 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 17/142 (11%) Query: 145 HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 LR+ G + + P A ++ I K +IG++ + + + Sbjct: 248 DTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--AIFWDKE-FIGKDALLKQKE 304 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 R + K +P +G + D EIG + +A + + Sbjct: 305 RGLPSKMVHFKMVDKGIPRAGYKVYKDGKEIGEVTSGTMSPLLGIGIGIAFVKPEYAVPG 364 Query: 251 IKKGMALTVHGVRVKASFPHWY 272 ++ + + + P +Y Sbjct: 365 VEIEIEIRGQKKKAVTVSPPFY 386 >gi|289745484|ref|ZP_06504862.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis 02_1987] gi|289686012|gb|EFD53500.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis 02_1987] Length = 379 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206 G + I P A + K + G+ + + R+ R + Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGR--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260 + G L P G +L D +G + +A ID D I+ G + V Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360 Query: 261 --GVRVKASFPH 270 V + P Sbjct: 361 GRAVECQVVCPP 372 >gi|238754574|ref|ZP_04615928.1| Aminomethyltransferase [Yersinia ruckeri ATCC 29473] gi|238707205|gb|EEP99568.1| Aminomethyltransferase [Yersinia ruckeri ATCC 29473] Length = 348 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117 L ++ + R+ + + + N+ I ++ +V + T I Sbjct: 93 RLVVNSATREKDLAWITQHAESYNISITVRDDLALVAIQGPQAQERVATLLTAEQKQAIA 152 Query: 118 ERFSIADVLL----------------------------HRTWGHNEKIASDIKTYHELRI 149 E + + + + LR+ Sbjct: 153 EMKPFFGIQTGDLFIATTGYTGEAGYEIALPKEQVVDFWQKLLAAGVKPAGLGARDTLRL 212 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + P +A M +IG+E + + + R + Sbjct: 213 EAGMNLYGQEMDEGVS-PLEANMGWTVAWLPEDRQFIGREALEQQRARGTDKLVGLIMTE 271 Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + +D + ++T TLG +A+AR+ + + + Sbjct: 272 KGVLRNELPVHFSDAAGNLHTGVITSGSFSPTLGFS-----IALARV-PAGIGEQAVVQI 325 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 326 RNREMPVKVTKP 337 >gi|118486291|gb|ABK94987.1| unknown [Populus trichocarpa] Length = 408 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 58/313 (18%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++ Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQ 139 Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82 D + ++ RD S++ L Sbjct: 140 NDHMYIVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASVLQHLT 199 Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + I ING + E F S + +A +L ++ G Sbjct: 200 KDDL-SKLYFGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKI 258 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G EV+ + Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILK 315 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVD 248 + R + T T P S S I + IG + KK +A+ + Sbjct: 316 QLAEG-PKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGS 374 Query: 249 HAIKKGMALTVHG 261 H + V G Sbjct: 375 HKAGTKAKILVRG 387 >gi|262202963|ref|YP_003274171.1| glycine cleavage system protein T [Gordonia bronchialis DSM 43247] gi|262086310|gb|ACY22278.1| glycine cleavage system T protein [Gordonia bronchialis DSM 43247] Length = 372 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 93/317 (29%), Gaps = 58/317 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A + A +T D+ + A+ + G ++ + + +D Sbjct: 55 SHLGKALVSGPGAAALVNATLTNDLGRIGPGRAQYTLCCNDSGGVIDDLIAYLVSDDEVF 114 Query: 67 LEIDRSKRDSLIDKLLF---------YKLRSNVIIEIQ-------------PINGVVLSW 104 L + + +++D L + R + + +Q P +++ Sbjct: 115 LIPNAANTAAVVDVLRAAAPDGVTVTDRHRDHAVFAVQGPRSPELLEGLGLPAGMEYMAF 174 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEK--------------------IASDIKTY 144 + R R + + + + Sbjct: 175 VDAELVTAGGARPVRVCRTGYTGERGYEILPSWDDAGPVFDTLLDGVRDLGGMPAGLGAR 234 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G + P I P A + K + G++ + + R+R Sbjct: 235 DTLRTEMGYALHGHELGPE-ITPVQARSSW--AVGWDKPHFGGRDALLAEKEAG-PRRRL 290 Query: 205 MIITGTD-DLPPSGSPILT--DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257 + T +P + + + IG K+ +A+A ID ++KG + Sbjct: 291 YGLRATGRGVPRADCEVRSGPGGERIGVCTSGTFSPTLKQGIALALIDTASG-VRKGDEV 349 Query: 258 TVH----GVRVKASFPH 270 ++ + + P Sbjct: 350 SIDVRGRDLPCEVVIPP 366 >gi|224113289|ref|XP_002332617.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex [Populus trichocarpa] gi|222832818|gb|EEE71295.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex [Populus trichocarpa] Length = 408 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 58/313 (18%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++ Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQ 139 Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82 D + ++ RD S++ L Sbjct: 140 NDHMYIVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASVLQHLT 199 Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + I ING + E F S + +A +L ++ G Sbjct: 200 KDDL-SKLYFGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKI 258 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G EV+ + Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILK 315 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVD 248 + R + T T P S S I + IG + KK +A+ + Sbjct: 316 QLAEG-PKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGS 374 Query: 249 HAIKKGMALTVHG 261 H + V G Sbjct: 375 HKAGTKAKILVRG 387 >gi|319404001|emb|CBI77589.1| glycine cleavage system T protein [Bartonella rochalimae ATCC BAA-1498] Length = 373 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 90/279 (32%), Gaps = 41/279 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A FL + D L +R + +L Q IL +++++++ F+ Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDAFLLKKGQSRYNYLLNEQAGILDDLILTRLDKYRFM 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF----- 120 L ++ + +L + + I ++ + + +++ + Sbjct: 122 LVVNAGNAQADFAELQKRAVGFDCKIVALERVLLALQGPQAASVLADAGLLGNELLFMQG 181 Query: 121 --------------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 S A L+ + + LR+ G+ Sbjct: 182 FEPYQDWFVTRSGYTGEDGFEIALSESQARSLVEKLLDDYRVEWIGLAARDSLRLEAGLC 241 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P T P +A + S+ K + G E R + R R + Sbjct: 242 LHGNDITPDTT-PIEAALTWAVSKSVREKAKFYGAEAFLRAYQKGPSRCRVGLKPQGRQP 300 Query: 214 PPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245 +G+ +L D +IG + G A+ ID Sbjct: 301 VRAGAVLLDDKGKQIGIVTSGGFGPSFNGPVAMGYVPID 339 >gi|302527127|ref|ZP_07279469.1| sarcosine oxidase oxidoreductase [Streptomyces sp. AA4] gi|302436022|gb|EFL07838.1| sarcosine oxidase oxidoreductase [Streptomyces sp. AA4] Length = 955 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 96/321 (29%), Gaps = 64/321 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + G ++ + ++ ED F+ Sbjct: 625 STLGKIDVQGPDAAQFLDLLYTNLMSTLKVGRIRYGVMCGVDGMVIDDGTVIRVAEDRFL 684 Query: 67 LEIDRSKRDSLID-----------KLLFYKL--------------RSNVI-------IEI 94 + ++D L + RS + +E+ Sbjct: 685 VTTTTGNAAMVLDWMEEWLQTEWPHLRVFATSVTEHWATVALVGPRSRELLAGLAPGLEV 744 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIASDI 141 ++W ++ + R S + L L Sbjct: 745 SNEAFGFMTWRDAEVAGIAARV-CRISFSGELAYEINVPSWYGLALWEALAEKGITPYGT 803 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 +T H LR G D T+ P D M +S K ++G+ SR ++ R Sbjct: 804 ETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSW--AVSKKKADFLGKRSFSRAENLRPDR 860 Query: 202 KRPMIITGTDD--LPPSGSPILTDD-------IEIGTLGVVVGKK------ALAIARIDK 246 K+ + + D L P G+ I+ +G + ALA+ R + Sbjct: 861 KQFVGLLPVDPTVLLPEGAQIIETAHVPRPPVRMLGHVTSSYPSAALDRTFALALVRSGR 920 Query: 247 VDHAIKKGMALTVHGVRVKAS 267 + + V V + Sbjct: 921 ERIGETLYVPVGDEVVPVTVT 941 >gi|319783863|ref|YP_004143339.1| glycine cleavage system T protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169751|gb|ADV13289.1| glycine cleavage system T protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 366 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 82/261 (31%), Gaps = 37/261 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A L D L ++ S L G IL +++++ + F+ Sbjct: 55 SHMKLFEVSGPEAAALLNRACPLDAGGLEISQSKLSFFLNEAGGILDDLIVTRLGDARFM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 + + + L L ++ I+P++ V L+ ++ S Sbjct: 115 VVANAGNAVADEKHLR--ALAADFDARIEPLDRVFLAIQGPEAWAALSRAGIETGSLLFM 172 Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152 ++ R AD L+ + G + + LR+ G Sbjct: 173 HGVEPRKNWFMSRSGYTGEDGFEIGLPEADARDLVAKLLGDERALWIGLAARDSLRLEAG 232 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D P T ALM + G +IG + + R +KR + Sbjct: 233 LCLHGQDITPETDPASAALMWAIPKDIRASGTFIGADALRAAVERGPAQKRVGLKPEGRQ 292 Query: 213 LPPSGSPIL-TDDIEIGTLGV 232 G+ + D G + Sbjct: 293 PVRGGAALFDADGNSAGHVTS 313 >gi|159570532|emb|CAP19396.1| aminomethyltransferase [Danio rerio] gi|159570761|emb|CAP19587.1| aminomethyltransferase [Danio rerio] Length = 409 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 86/273 (31%), Gaps = 50/273 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK + F++++I D+ L S +G I+ +++K ++D + + Sbjct: 95 KVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAG 154 Query: 73 KRDS----LIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 D + +L +K S +V +E + + L D Sbjct: 155 CADKDSAHMQARLQEFK--SAGHDVDLEFMEESLIALQGPSMARVLQKGVGDDLKKLTFM 212 Query: 118 -----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELR 148 F I + R +E + + LR Sbjct: 213 TSVLTPVFGIQGCRVTRCGYTGEDGVEISVPSKEVVSLTEKLLADSEVKLAGLGARDSLR 272 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + G+ D T P +A + G + + G +++ RKR +I Sbjct: 273 LEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKAKTPRKRVGLI 331 Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239 + T +PIL +D IG + L Sbjct: 332 S-TGPPVRQHTPILSSDGRVIGEVTSGCPSPCL 363 >gi|126733838|ref|ZP_01749585.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2] gi|126716704|gb|EBA13568.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2] Length = 832 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 94/318 (29%), Gaps = 64/318 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT----LPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A F+ DV +P + L G I +++I Sbjct: 507 MSSFGKIRVEGRDATAFM-----NDVGGGDYDVPVGKIVYTQFLNSMGGIEADVTVTRIS 561 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102 E +++ + R + + + NV+I ++ GV+ Sbjct: 562 ELCYLVVTPAATRLADQTWMRRHVGDFNVVITDVTAGEGVLAVMGPNSRKLLEAVSPADF 621 Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------- 145 QE R + L + ++ +T H Sbjct: 622 SNAVNPFGTAQEIEIGMGLARVHRITYVGELGWEVYMSSDMAGHVFETLHDAGQDMGLKL 681 Query: 146 -------ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 R+ G D +A + + K +IG++ V R + Sbjct: 682 CGMHMMDAARMEKGFRHFGHDITAEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKRETG 738 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDKVDH 249 + R+ +T + L PI+ D + L + + + V Sbjct: 739 LERRLVQFKLTDPEPLLYHNEPIVRDGEVVSYLSSGGYGHHLGAAIGMGYVPCKGESVAE 798 Query: 250 AIKKGMALTVHGVRVKAS 267 + + V G RVKA Sbjct: 799 LLASDFEIDVMGTRVKAE 816 >gi|313680530|ref|YP_004058269.1| aminomethyltransferase [Oceanithermus profundus DSM 14977] gi|313153245|gb|ADR37096.1| aminomethyltransferase [Oceanithermus profundus DSM 14977] Length = 357 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 83/307 (27%), Gaps = 52/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ FL+ D L A+ S + +G ++ + + E+ ++ Sbjct: 53 SHMGEFFVRGPQALAFLRWATLNDPAKLKVGRAQYSMLPNDRGGVVDDVYVYRTGEEEYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ + L +V +E +++ Sbjct: 113 VVVNAANVAKDWAHLNALVGSFDVELEDASDAWALMALQGPRAEGALQTLTDTDLSRVRK 172 Query: 110 ----FSNSSFIDERFSIADVLL----------------HRTWGHNEKIASDIKTYHELRI 149 + + R + R + + LR+ Sbjct: 173 NATLALTVAGVPARIARTGYTGEDGFEIFTAPEDAPAVWRALLEAGATPAGLGARDTLRL 232 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G + +T P + + + Y G+E + +R + + Sbjct: 233 EAGFPLYGHELTDAT-NPRCTPLAWV----IKDKPYYGREALEAA----ACDERLVGMVM 283 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G P+L G + AL R D + + + + + Sbjct: 284 ERGIPREGYPVLAGGAPAGRVTSGTQSPVLKKGIALGWVRADLAEEGTELAVEVRGRALP 343 Query: 264 VKASFPH 270 + P Sbjct: 344 ARVVRPP 350 >gi|260459854|ref|ZP_05808107.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] gi|259034065|gb|EEW35323.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] Length = 715 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 93/305 (30%), Gaps = 56/305 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G + LQ +T DV L SA+ G ++ + ++ +D F Sbjct: 385 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 444 Query: 66 IL----EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94 ++ KL LR S + I Sbjct: 445 RWVGGDDLSGEWLRETAKKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVIWTSPLQPSI 504 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142 + + + + + R L + W EK+ I Sbjct: 505 DELEWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 564 Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +RI G++ +F T P +A + + +IG+E + R + Sbjct: 565 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKTKTDDFIGREALIRRKEN 623 Query: 198 NIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIK 252 + + + ++ G + +IG + V K +A+AR+D A+ Sbjct: 624 PQNK--LVGLDIDSNVAVGHGDCVHVGRAQIGVVTSGMRSPVLNKNIALARLDVTHAAVG 681 Query: 253 KGMAL 257 + + Sbjct: 682 TEVEI 686 >gi|224826357|ref|ZP_03699459.1| glycine cleavage system T protein [Lutiella nitroferrum 2002] gi|224601458|gb|EEG07639.1| glycine cleavage system T protein [Lutiella nitroferrum 2002] Length = 362 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 90/278 (32%), Gaps = 42/278 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G A +LQ +I DV L A S +L G ++ ++ + Sbjct: 52 SHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLNADGGVVDDLIVYLTS-YGY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115 + ++ D + + K +V ++++ ++ S Sbjct: 111 RMVVNAGTTDKDLAWMEQQKAGFDVTLKVRRDLAMLAVQGPNAIAKVCSVKPTLADAIKS 170 Query: 116 --IDERFSIADVLLHRTWGHNEK------IASDIKTY-----------------HELRIN 150 I + D RT E A++ + LR+ Sbjct: 171 LKIFQGLPAGDWFFARTGYTGEDGLEIMVPATEAPAFFRELLAAGVAPIGLGARDTLRLE 230 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D T+ P A M + +IG++ + + + K+ ++ Sbjct: 231 AGMNLYGHDM-DETVSPLAAGMGWTIAWEPAERDFIGRQALEAQKAAGVAMKQVGLVLEG 289 Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 + G ++ + G + K ++AIAR+ Sbjct: 290 RGVLREGQKVVVEGAGEGVITSGTFSPTLKHSIAIARV 327 >gi|221101861|ref|XP_002156170.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 861 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 51/267 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK A FL ++ + ++ S +L+ GK+ +S + + +++ Sbjct: 535 HITGKDASKFLNYMVANKLPSI--GRTNVSHMLSSTGKVYAEVTVSALAPNHYLVITGGG 592 Query: 73 KRDS----LIDKLLFYKL-----------------RSNV---IIEIQPINGVVLSW--NQ 106 LID Y + RS V + ++ S+ N+ Sbjct: 593 SEYHDLRWLIDHARKYDVQIDNKTDQVSAISINGPRSRVLLQKLTSTDVSDKAFSFMQNK 652 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------DIKTY--HELRI 149 E + R S L + N K + Y + +RI Sbjct: 653 ELDIGGIPVLALRVSYTGELGWEFYVENSKALDLYIKLLTAGQELNIGHVGAYAINSMRI 712 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MII 207 G ++ + P++A +D I L KG ++G++ + R I +KR MI+ Sbjct: 713 EKGFRLWGSEM-NMDVGPYEAGLDFF--IKLDKGDFLGRDALI-SHKRTIQKKRLVCMIV 768 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV 234 + P I D IG Sbjct: 769 QTDNIDPEGDQAIWLGDEVIGNTTSGC 795 >gi|83309865|ref|YP_420129.1| glycine cleavage system aminomethyltransferase T [Magnetospirillum magneticum AMB-1] gi|82944706|dbj|BAE49570.1| Glycine cleavage system T protein [Magnetospirillum magneticum AMB-1] Length = 371 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 86/266 (32%), Gaps = 44/266 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ L+ ++ D+ L R S QG IL +ISK+ ED Sbjct: 57 SHMGQASIRGAKAVELLETLVPGDIQALGLGKTRYSVFTNDQGGILDDLMISKLAEDHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------IQPINGVV---- 101 L I+ + + + L + L V + + P G + Sbjct: 117 LVINAACKHADFAHLKAH-LGDKVELSMIEDRSLLALQGPGAAAAMVTLCPEAGAMTFMT 175 Query: 102 -----------LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 L+ +T + I + + L + + + LR+ Sbjct: 176 IAEITVAGIKCLATRSGYTGEDGWEISVANADVETLARAILAAPGVMPAGLGARDSLRLE 235 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMII 207 G+ +D T P +A + + +S + G + G V+ + R+R I Sbjct: 236 AGLCLYGSDIDT-TTTPVEASIAWI--MSKRRRAEGGFPGAAVIQKQLAEGAPRRRVGIQ 292 Query: 208 TGTDDLPPSGSPILTD-DIEIGTLGV 232 + + I + +G + Sbjct: 293 PDGKAPARAHTEITDEAGNRLGEICS 318 >gi|259415784|ref|ZP_05739704.1| sarcosine dehydrogenase [Silicibacter sp. TrichCH4B] gi|259347223|gb|EEW59000.1| sarcosine dehydrogenase [Silicibacter sp. TrichCH4B] Length = 800 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 72/271 (26%), Gaps = 53/271 (19%) Query: 7 SNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ I V G A FL + +A+L +G +I E Sbjct: 485 SSFGKIDVTGPDAEAFLLHVCAGQM-----ARAPGSVIYTAVLNERGTFESDITAQRIAE 539 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------ 104 D + L + + + L + +V I Sbjct: 540 DHYRLFVGTAAIKRDMAWFLRHGEGYDVSICDTTEEHATFGLMGPEAAKTASAVGAESLT 599 Query: 105 ------NQEHTFSNSSFIDERFSIADVLLH-------------RTWGHNEKIASDIKTYH 145 + E T + R S R + + Sbjct: 600 QINYFKHGEATIAGHHIRAARLSYVGEAGWEITCRAAHAQDVYRALTQAGAAPAGLYAQT 659 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 +RI G + S + P D + G +L K G YIG E + + + + Sbjct: 660 SMRIEKGFCAMGHEL-DSDVTPLDVGL----GFALRKSGGYIGAEAIEEKRKTSTTHQVV 714 Query: 205 MIITGTDDLPPSG-SPILTDDIEIGTLGVVV 234 +I D P G P+ + D IG Sbjct: 715 SLILDDPDAVPLGHEPVYSGDQIIGHTTSCA 745 >gi|113955074|ref|YP_732040.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. CC9311] gi|123132329|sp|Q0I682|GCST_SYNS3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|113882425|gb|ABI47383.1| glycine cleavage system T protein [Synechococcus sp. CC9311] Length = 369 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 102/306 (33%), Gaps = 54/306 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61 S+ +++ G + LQ ++ +D+ + A S +L QG I+ +I + Sbjct: 51 SHMGVLRIEGANPKDALQQLVPSDLHRIGPGQACYSVLLNEQGGIIDDLIIYDLGPSLLD 110 Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNS 113 +T ++ I+ + ++ + + R+++ + + +GV+L+ S S Sbjct: 111 ESHETLLVVINAACAETDTAWIRQHLERADLQVLDEKKDGVLLALQGPKAIGLLERLSGS 170 Query: 114 SFID-ERF--------------------------------SIADVLLHRTWGHNEKIASD 140 + RF + L + Sbjct: 171 DLSELPRFGHCSLNIHGLQAPVFTARTGYTGEDGVELLLKADDGRQLWQLLLEEGVTPCG 230 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ + D +T P +A + L + + +IG++ + + + Sbjct: 231 LGARDTLRLEAAMHLYGQDMDAATT-PFEAGLGWLVHLEMP-ALFIGRQALEQAAEQG-P 287 Query: 201 RKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 KR + + P++ + +G + L A+A + + + Sbjct: 288 SKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTEL 347 Query: 256 ALTVHG 261 ++ + G Sbjct: 348 SVEIRG 353 >gi|54400544|ref|NP_001006021.1| aminomethyltransferase, mitochondrial [Danio rerio] gi|53734452|gb|AAH83400.1| Aminomethyltransferase [Danio rerio] gi|70780331|gb|AAZ08415.1| glycine cleavage system protein T [Danio rerio] gi|182890318|gb|AAI64008.1| Amt protein [Danio rerio] Length = 409 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 86/273 (31%), Gaps = 50/273 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK + F++++I D+ L S +G I+ +++K ++D + + Sbjct: 95 KVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAG 154 Query: 73 KRDS----LIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 D + +L +K S +V +E + + L D Sbjct: 155 CADKDSAHMQARLQEFK--SAGHDVDLEFMEESLIALQGPSMARVLQKGVGDDLKKLTFM 212 Query: 118 -----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELR 148 F I + R +E + + LR Sbjct: 213 TSVLTPVFGIQGCRVTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSLR 272 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + G+ D T P +A + G + + G +++ RKR +I Sbjct: 273 LEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKAKTPRKRVGLI 331 Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239 + T +PIL +D IG + L Sbjct: 332 S-TGPPVRQHTPILSSDGRVIGEVTSGCPSPCL 363 >gi|283782420|ref|YP_003373175.1| glycine cleavage system T protein [Pirellula staleyi DSM 6068] gi|283440873|gb|ADB19315.1| glycine cleavage system T protein [Pirellula staleyi DSM 6068] Length = 373 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 105/318 (33%), Gaps = 65/318 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64 S+ ++V G A+ +L +++T V + R + G IL L+ +++ Sbjct: 53 SHMGRLRVEGPGALAYLDSLVTRKVAGMGPGKIRYGLVCNEAGGILDDILVYHLQQHGGG 112 Query: 65 --FILEIDRSKRDSLIDKLLFYKLRS--NVIIE-------------------IQPINGVV 101 ++ ++ S RD ++ + L + +V ++ ++P+ GV Sbjct: 113 LYALVVVNASNRDKIVSHFQAH-LPASGDVTLDDRTLETAMIAVQGPKALAVVEPLVGVD 171 Query: 102 LSW-----NQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139 + E T I R E + Sbjct: 172 VGGLSYYTGTETTICGKPGIVSRTGYTGEDGCEVILPAEAAKDFCDKCLEHGVSVGAAPA 231 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR--IQHR 197 + LR+ + + ++ P A +D + G+E + R I +R Sbjct: 232 GLGARDTLRLEAAMPLYGHEL-SESLDPLQAGLDFAVTLE-------GREFLGRQAILNR 283 Query: 198 NIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHA 250 ++RP+ + + + D +G + +KA+A+A ++ A Sbjct: 284 RADKERPVRVGLELAGRRAAREHYAVYSGDKRVGEVTSGAFAPTVQKAIAMAYVEPQLAA 343 Query: 251 IKKGMALTVHGVRVKASF 268 + +A+ + G A Sbjct: 344 VGTELAVDIRGTMETARV 361 >gi|218676579|ref|YP_002395398.1| glycine cleavage system T protein [Vibrio splendidus LGP32] gi|218324847|emb|CAV26581.1| glycine cleavage system T protein [Vibrio splendidus LGP32] Length = 388 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G +A L++++ D++ LP R + QG I+ +++ + D Sbjct: 70 SHMGQLRLHGANAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 128 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122 + ++ + + ID L + L ++V +E+ ++ + + + F + Sbjct: 129 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 187 Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 188 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSLRLE 247 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205 G+ D +T +L+ + + G + G +++ +I +++ RKR Sbjct: 248 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 307 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + +D +IG + ++A R D + + Sbjct: 308 LVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNAGKPVSMAYVRTDIAVIGTEVFAEVR 367 Query: 259 VHGVRVKASF 268 + + Sbjct: 368 GKKLPMTVEK 377 >gi|254229180|ref|ZP_04922599.1| glycine cleavage system T protein [Vibrio sp. Ex25] gi|262395530|ref|YP_003287383.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. Ex25] gi|151938265|gb|EDN57104.1| glycine cleavage system T protein [Vibrio sp. Ex25] gi|262339124|gb|ACY52918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. Ex25] Length = 372 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 103/310 (33%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D Sbjct: 54 SHMGQLRLLGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118 + ++ + ++ I L + L S V ++I ++ + + F E Sbjct: 113 VVVNAACKEQDIAHLQAH-LPSGVELDIIEDRALLAIQGPKAAAVLARFAPEVSDMLFMD 171 Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L + E + LR+ Sbjct: 172 IRKVDILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D +T +L+ + + +G + G +++ + I+ +++ RKR Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258 ++ T G+ + D ++IG + ++ R D + + Sbjct: 292 LVGQTKAPVREGAELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351 Query: 259 VHGVRVKASF 268 + + Sbjct: 352 GKMLPMTVEK 361 >gi|297626753|ref|YP_003688516.1| glycine cleavage system T protein, aminomethyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922518|emb|CBL57091.1| Glycine cleavage system T protein, aminomethyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 385 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A +L ++ AD+ + A+ + TP+G ++ + + +D Sbjct: 70 SHLGKIRVTGPGAKDYLNGVLAADLNKIVPGKAQYQLLCTPEGGVVDDMIAYLLGDDDVF 129 Query: 67 L 67 L Sbjct: 130 L 130 >gi|50555027|ref|XP_504922.1| YALI0F02849p [Yarrowia lipolytica] gi|49650792|emb|CAG77727.1| YALI0F02849p [Yarrowia lipolytica] Length = 406 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 95/276 (34%), Gaps = 56/276 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G +A FL+ I AD+ L + S +LTP+G I+ +ISK E+ F + + Sbjct: 93 RFSGPAATEFLEKITPADLQALQPFTSTLSVLLTPEGGIVDDLIISKHGENDFYVVTNAG 152 Query: 73 KRDSLIDKLLF------YKLRSNVIIEIQPINGVVLSWNQEHT---------------FS 111 RD + L KL + G++ E F Sbjct: 153 CRDKDLAFLAKESEPFGDKL-----VHDTIGGGLIALQGPEAAAALQKFTNYDLSQIKFG 207 Query: 112 NSSFID-----------------------ERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 S+++D + + ++ IA + LR Sbjct: 208 QSAWVDFGGNKYHVARGGYTGEDGFEVSIPDDAASVAFAEALLENDNVIAVGLAARDSLR 267 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG----QEVVSRIQHRNIIRKRP 204 + G+ + + P +A + + G + G G +++++I+ ++ + R Sbjct: 268 LEAGMCLYGHEL-SEELTPVEAGLTWVVGKARRSGDRTGFNGSDKILAQIKDKSATKAR- 325 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKAL 239 + + P G IL + ++G + +L Sbjct: 326 VGLFNDGPAPREGVAILNEAGEKVGVVTSGCKSPSL 361 >gi|289580397|ref|YP_003478863.1| glycine cleavage system protein T [Natrialba magadii ATCC 43099] gi|289529950|gb|ADD04301.1| glycine cleavage system T protein [Natrialba magadii ATCC 43099] Length = 365 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 93/310 (30%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ I V G A +Q + + DV L ++ + I G I+ ++ ++ ++ Sbjct: 51 SHMGQIHVTGPDATTLMQRLTSNDVTRLDVGDSQYATITDEDGLIIDDTVVYRLPDENGE 110 Query: 64 -TFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTF------SNSS 114 T++ + ++ ++ + Y+ ++ Q + + + ++ S Sbjct: 111 ATYLFVPNAGTDEATHERWISYRNEFDLEATVDNQTDEYAMFAVQGPNAPDLVDEVTDES 170 Query: 115 FID-ERFSIADVLL---------------------------HRTWGHNEKIASDIKTYHE 146 D +RF+ + W + + Sbjct: 171 LTDVDRFTATMATVDGVECWTARTGYTGEDGFELIVPASEAEDIWAQFDCQPCGLGARDT 230 Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G++ DF + P++ + + ++G++ + + + Sbjct: 231 LRIEAGLLLAGQDFDLESNPRTPYETGIGFTVALDTE---FVGRDALEAAREDGFDEELV 287 Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +P G I D IGT+ L + D + + Sbjct: 288 GFQLIDRGIPRHGYDITNMDGRVIGTVTSGTMSPTLDQPIGLGYVPSEYADPGTTLQVVV 347 Query: 258 TVHGVRVKAS 267 + + Sbjct: 348 RGQSKKARVE 357 >gi|212633781|ref|YP_002310306.1| glycine cleavage system aminomethyltransferase T [Shewanella piezotolerans WP3] gi|226711375|sp|B8CK16|GCST_SHEPW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|212555265|gb|ACJ27719.1| Glycine cleavage system T protein [Shewanella piezotolerans WP3] Length = 364 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 56/163 (34%), Gaps = 3/163 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L G ++ + + + + Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTQY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F D + + + Sbjct: 110 RIVVNSATREKDLAWINEQVKGFSVEVTERPELAMIAVQGPNAKAKAATVFNDTQNAAVE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166 + + + Y E + + + L Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEVIVPEAEAEALWQAFL 212 >gi|70733247|ref|YP_263020.1| glycine cleavage system aminomethyltransferase T [Pseudomonas fluorescens Pf-5] gi|68347546|gb|AAY95152.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5] Length = 360 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 103/304 (33%), Gaps = 44/304 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +LQ ++ DV L A S +L +G I+ ++ ++ ED + Sbjct: 50 SHMTVIDVSGTQAKAWLQRLLANDVERLHNPGQALYSTMLNERGGIVDDMIVYRL-EDAY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117 L ++ + RD + + V + +P ++ + T S + I Sbjct: 109 RLALNAATRDQDLAWMQAQLGDFQVQLHERPELAMLAIQGPQARHKIAELVTQSRGTLIQ 168 Query: 118 ERFSI-----ADVLLHRTWGHNEK-----IASD------------------IKTYHELRI 149 + D + RT E + +D + LR+ Sbjct: 169 QLKPFEAGFDGDWFIARTGYTGEDGLEIVLPADQAPAFFNDLVGAGISPIGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D + P A M +IG+ + + + +K ++ Sbjct: 229 EAGMNLYGQDI-HQDVSPLAANMAWSIAWEPASRQFIGRSALEAERAAGVKQKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + D+ G + K++A+AR+ + A + + + V+ Sbjct: 288 ERGVLRAHQVVRIADVGEGEITSGSFSPTLSKSIALARV-PMATADRAEVEIRGKWYPVR 346 Query: 266 ASFP 269 P Sbjct: 347 VVKP 350 >gi|290957225|ref|YP_003488407.1| glycine cleavage T protein aminomethyltransferase [Streptomyces scabiei 87.22] gi|260646751|emb|CBG69848.1| putative glycine cleavage T protein aminomethyltransferase [Streptomyces scabiei 87.22] Length = 350 Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 101/297 (34%), Gaps = 59/297 (19%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ D+ + AR + I G IL ++ ++ + Sbjct: 32 LSHMGEITVSGPGAAALLDHALV-GDIGGVKPGRARYTMICREDGGILDDLIVYRLGDTE 90 Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + S D+L+++ + + V + + ++ E +S D Sbjct: 91 YLVVANASNAQVVLDALVERAAGFD--AEVR-DDRDAYALLAVQGPESPGILASLTDADL 147 Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 + L+ RT E K ++ + Sbjct: 148 DGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLVPCG 207 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVV--SRIQHR 197 LR+ G+ + + P DA + + + K G ++G+ + + Sbjct: 208 LSCRDTLRLEAGMPLYGHELSTE-LTPFDAGLGRV--VKFGKEGDFVGRAALREASEHVN 264 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 + +I +P +G P++ + IG + L A+A +D + A Sbjct: 265 HEPPVLVGLIAEGRRVPRAGYPVVAEGKVIGEVTSGAPSPTLGKPIAMAYVDAMYAA 321 >gi|163796958|ref|ZP_02190914.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha proteobacterium BAL199] gi|159177705|gb|EDP62256.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha proteobacterium BAL199] Length = 823 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 95/315 (30%), Gaps = 63/315 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ + +V G A LQ + ADV +P + L P+G I ++++ E F Sbjct: 491 MSSFAKFRVEGPDAEAVLQLVSAADVA-VPVGRCAYTQWLNPRGGIEADLTVTRLSEAAF 549 Query: 66 ILEIDRSKRDSLIDKLLFYK---LR--------SNVIIEI-QPINGVVLSWNQEHTFSNS 113 ++ + + L + R + +I + P VL + SN Sbjct: 550 LVVTSGGAQTRDLAWLRRHVPDGARCVVTDASAAEAVISVMGPKAREVLQPLTPQSLSNE 609 Query: 114 SFI---------------DERFSIADVLLHRTWGHNEKI-----------------ASDI 141 +F R S L + + + Sbjct: 610 AFPFGTAQTIEIGMGLARAHRLSYVGELGWEIYVATDMARHVFDAILESGERHGLRLCGM 669 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQH 196 RI G D +A + + + K G +IG++ V R + Sbjct: 670 HALDSCRIEKGYRHFGHDISGEDHV-LEAGLGF--AVKVDKPRSAFGDFIGRDAVLRRRE 726 Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI---DK 246 + + + +T L PIL D +G + G L + Sbjct: 727 QGLTHRLLQFRLTDPQPLLYHNEPILQDSKAVGRITSGNYGHWLGGAVGLGYVPCRPGES 786 Query: 247 VDHAIKKGMALTVHG 261 + + + A+ V G Sbjct: 787 AEEVLARSYAINVAG 801 >gi|85703653|ref|ZP_01034757.1| aminomethyltransferase [Roseovarius sp. 217] gi|85672581|gb|EAQ27438.1| aminomethyltransferase [Roseovarius sp. 217] Length = 390 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 86/282 (30%), Gaps = 58/282 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L ++T DV + + +G ++ + + + + L Sbjct: 67 RITGPDAARVLNRLVTRDVAKIATGRVGYALWCDEEGMVIDDGTLFHLGPEDWRLCCQEP 126 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------------- 117 L++ + ++++ E + I G+ L + ++ +D Sbjct: 127 MLTWLLEAAWGFN--ADILDESREIAGLALQGPTAYAVLCAAGLDVAHLRPFDLEEVEPG 184 Query: 118 ---ERFSIADVL---LHRTWGHNEKIASDIKT-----------YHE---LRINHGIVDPN 157 R L L WG + + Y RI G + Sbjct: 185 LMISRTGFTGDLGYELWTAWGDALPLWDRLWQAGDNLGLRAIGYEAVNIARIEAGYMVAG 244 Query: 158 TDFLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 DF P+ P + + + + LTKG + G+ R R M + Sbjct: 245 VDFQPAHATERLHRGHTPLELGLGPM--VDLTKGHFNGR----RALLATKPRSLLMRLDV 298 Query: 210 TDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARI 244 P G+ + E+G + V ALA +I Sbjct: 299 EGFKPAQGALVYQAKRREVGHVTSGVWSPTAKRNIALAHVQI 340 >gi|239834154|ref|ZP_04682482.1| glycine cleavage system T protein [Ochrobactrum intermedium LMG 3301] gi|239822217|gb|EEQ93786.1| glycine cleavage system T protein [Ochrobactrum intermedium LMG 3301] Length = 367 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 47/266 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ I+V G A L T D L ++ + L G +L +++++ ED Sbjct: 56 SHMKLIEVSGADAAALL--AETCPLDPTVLKEGQSKYTFFLNENGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLNEAASGKNVTVNPLDRVFLALQGPEAESVINDAGLKGAELAFM 173 Query: 105 ----------------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 E F DE A L R + LR Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADE----ARALATRLLADERVEWIGLAARDSLR 229 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207 + G+ D P T P A + + K + G + V + KR + Sbjct: 230 LEAGLCLHGQDITPETD-PVSAGLTWAITKPVREKAAFNGAKAVLDAIAKGAAAKRVGLK 288 Query: 208 TGTDDLPPSGSPILTD-DIEIGTLGV 232 +G+ + + +IGT+ Sbjct: 289 PEGRQPVRAGADLFDESGRQIGTVTS 314 >gi|330809034|ref|YP_004353496.1| aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377142|gb|AEA68492.1| putative aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 780 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 57/309 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A LQ +T DV L SA+ G +L + ++ D F Sbjct: 457 EIIGPDAEALLQYCLTRDVRRLAVGQVVYSAMCHEHGGMLDDGTLLRLGPDNFRWICGED 516 Query: 73 KRDS----LIDKLLFYKLRSN---VIIEIQPING----------VVLSWNQEH------- 108 + KL K+ I + G V Q Sbjct: 517 YAGAWLREQAQKLGM-KVWVKSASEQIHNLAVQGPMSRELLKQMVWTPATQPSLENLGWF 575 Query: 109 --------TFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 + + R L + W E + ++ Sbjct: 576 RFLVGRLDCYDGCPLMISRTGYTGELGYEVWCQPEDAERVWDRIWQQGQPLGLVPLGLEA 635 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G++ +F T P +A + + +IG++ + R + Sbjct: 636 LDMLRIEAGLIFAGYEFSDQTD-PFEAGIGFSVPMKSKTDDFIGRDALLRRSAHPTHKLV 694 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL-T 258 + ++G ++ G P+ ++G + L A+ R+D + + + Sbjct: 695 GLQLSG-NEAAHHGDPVYRGRAQVGVITSACRSPLLASNIALCRVDVACADVGTMLEIGK 753 Query: 259 VHGVRVKAS 267 V G++ + S Sbjct: 754 VDGLQKRIS 762 >gi|319786131|ref|YP_004145606.1| glycine cleavage system protein T [Pseudoxanthomonas suwonensis 11-1] gi|317464643|gb|ADV26375.1| glycine cleavage system T protein [Pseudoxanthomonas suwonensis 11-1] Length = 377 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 52/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ V L A S +L QG ++ + + +D F Sbjct: 59 SHMTVVDLHGVQVRQFLRRLLANSVDKLKTRGKALYSCMLDGQGGVIDDLIAYYLGDDYF 118 Query: 66 ILEIDRSKRDSLIDKLLFYK------LRSNVIIEI---------QPINGVVLSWNQEHTF 110 L ++ + R+ + + +R + I + G++ ++E Sbjct: 119 RLVVNAATREKDLAWIRQQAQAFGVEVRERAELAIIAVQGPQARDKVVGLLAEADRERAA 178 Query: 111 SNSSFIDERFSIADVLL--------------------------HRTWGHNEKIASDIKTY 144 + F + A + + + Sbjct: 179 GLARFAAIDVASAGGIPLFLARTGYTGEDGFEVVLPQDQAVAFWNALLEAGVKPAGLGAR 238 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR+ G+ D + P ++ + +SL +G +IG+ + + + R+ Sbjct: 239 DTLRLEAGMNLYGQDM-DESTTPWESGLGWT--VSLDEGRDFIGRAALEAQKAAGVPRQL 295 Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259 ++ + G +L E GT +G KA+A+ARI + + + Sbjct: 296 VGLVMDERGVLRHGQKVLAAGGEGEILSGTFSPTLG-KAIALARI-PAGEPGQVRVDIRG 353 Query: 260 HGVRVKASF 268 V V+ Sbjct: 354 REVPVRVVK 362 >gi|292487128|ref|YP_003529998.1| aminomethyltransferase [Erwinia amylovora CFBP1430] gi|292900489|ref|YP_003539858.1| aminomethyltransferase (glycine cleavage system protein) [Erwinia amylovora ATCC 49946] gi|291200337|emb|CBJ47465.1| aminomethyltransferase (glycine cleavage system protein) [Erwinia amylovora ATCC 49946] gi|291552545|emb|CBA19590.1| aminomethyltransferase [Erwinia amylovora CFBP1430] gi|312171233|emb|CBX79492.1| aminomethyltransferase [Erwinia amylovora ATCC BAA-2158] Length = 365 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L ++ ++ I E+ F Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTRPGKALYTAMLNASAGVIDDLIVYFISEEFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSIA 123 L ++ + R+ + + + V + + ++ S D +R +++ Sbjct: 110 RLVVNSATREKDLAWIAQHAAAYGVELTERDDLSLIAVQGPNAQQKAQSVFDDAQRDAVS 169 Query: 124 D----------------------------------VLLHRTWGHNEKIASDIKTYHELRI 149 L + + + LR+ Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEPGYEIALPNQQAAELWQRLLAAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + T+ P A M G + +IG+E++ + + R Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRPFIGREMLELQRAKGTERLVGLVMTE 288 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 K + + +L I G+ +G ++A+AR+ + + + Sbjct: 289 KGVLRNALPVHFSDADGNMLEGVITSGSFSPTLG-YSIALARV-PAGIGEQAVVQIRNRA 346 Query: 262 VRVKASFP 269 + V + P Sbjct: 347 MPVTVTKP 354 >gi|269104350|ref|ZP_06157046.1| aminomethyltransferase (glycine cleavage system T protein) [Photobacterium damselae subsp. damselae CIP 102761] gi|268160990|gb|EEZ39487.1| aminomethyltransferase (glycine cleavage system T protein) [Photobacterium damselae subsp. damselae CIP 102761] Length = 372 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 107/312 (34%), Gaps = 54/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G+ A L+ ++ D++ LP R + QG I +++ D Sbjct: 54 SHMGQIRLIGEEAAKELEKLVPVDIIDLPVGKQRYALFTNEQGGIEDDLMVTNFG-DCLY 112 Query: 67 LEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + + I++L + L ++ +Q + S+ F+D Sbjct: 113 LVVNAACKHQDIERLKQHLAPSVTLEVLEDRALLALQGPKAAAVLAQLNPAVSDMVFMDA 172 Query: 119 -------------RFSIADVLLHRTWGHNEKIAS--------DIKTY------HELRINH 151 R N K+ + + LR+ Sbjct: 173 CRLDLLGVECFVSRSGYTGEDGFEISVPNNKVEEIACHLVEFEEVEWIGLGARDSLRLEC 232 Query: 152 GIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRKR 203 G+ D ST P +A + L G G + G +V+ +I+ + I++KR Sbjct: 233 GLCLYGHDLTSSTT-PVEASLLWAISPIRRLGGE--RAGGFPGADVILEQIKTKQIVQKR 289 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMA 256 +I T G+ +L +D IGT+ ++ A I D ++ Sbjct: 290 IGLIGLTKAPVREGAELLDENDQVIGTVTSGTYGPSIAQPVLMAFVDIAHTDIGMEMWAL 349 Query: 257 LTVHGVRVKASF 268 + + V+ + Sbjct: 350 VRGKKIPVQVTK 361 >gi|302540707|ref|ZP_07293049.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces hygroscopicus ATCC 53653] gi|302458325|gb|EFL21418.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces himastatinicus ATCC 53653] Length = 818 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 58/270 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ FLQ + T + + +L G + ++++ E+ F + + Sbjct: 507 LEVTGPGALDFLQRMTTNQLAK-KPGAVTYTLLLDEAGGVRSDLTVARLGENRFQVGANS 565 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSF----- 115 +D LL + +V I +I P + W FS+ +F Sbjct: 566 GI---DLDWLLRHA-PDDVHIADITPGTCCIGVWGPLARELVQPLTPDDFSHQAFGYFKA 621 Query: 116 ----------IDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELR 148 R S L + + IA+ ++ LR Sbjct: 622 RRTYIGHVPVTAMRLSYVGELGWELYTTADLGLRLWDTLWEAGQRHAVIAAGRSAFNSLR 681 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN--IIRKRPMI 206 + G D P++A + + + KG ++G+ + ++ R R+R Sbjct: 682 LEKGYRAWGHDMTTEHD-PYEAGVGF--AVRMNKGDFLGR---AALEGRGEETARRRLAC 735 Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVV 234 +T D P+ D + G + Sbjct: 736 LTLDDPAAIVLGKEPVYVDGVAAGYVTSAS 765 >gi|260431237|ref|ZP_05785208.1| dimethylglycine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] gi|260415065|gb|EEX08324.1| dimethylglycine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157] Length = 817 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 17/149 (11%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPY--KIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G A L ++ LP + +L +G+I L + K+ ED + L Sbjct: 498 VEVSGPDARALLDRLVAN---RLPQKVGGIALTHMLNRRGRIELETTVVKLAEDRYYLVC 554 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDE 118 L+D L ++ NV I ++ N LS N + N+ F Sbjct: 555 AAFFEQRLLDHLTQHRDEENVDIILRSDNWAALSLNGPRAREVLAACTDADLRNAGFKWL 614 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHEL 147 DV HR W A ++ + Sbjct: 615 TAQEIDVAGHRLWAFRMSYAGELG-WELH 642 >gi|56696476|ref|YP_166833.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] gi|56678213|gb|AAV94879.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] Length = 818 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 6/142 (4%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A L + + P IA + +L +G+I L + K++ED F L Sbjct: 498 VEVSGPDAGALLDRLTANRLPQKPGGIA-LTHMLNRRGRIELETTVVKLDEDRFYLVCAA 556 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR-T 130 L+D L ++ +++ + + L+ N H + + AD+ R Sbjct: 557 FFEQRLLDHLAAHRGTADITVRNLSTDWAALALNGPHARDILAA----CTEADLSNARFK 612 Query: 131 WGHNEKIASDIKTYHELRINHG 152 W ++I + LR+++ Sbjct: 613 WLTAQQITVAGHSLWALRMSYA 634 >gi|167625286|ref|YP_001675580.1| glycine cleavage system aminomethyltransferase T [Shewanella halifaxensis HAW-EB4] gi|189039320|sp|B0TSG7|GCST_SHEHH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|167355308|gb|ABZ77921.1| glycine cleavage system T protein [Shewanella halifaxensis HAW-EB4] Length = 364 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L G ++ + + + + Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEY 109 Query: 66 ILEIDRSKRD 75 + ++ + R+ Sbjct: 110 RIVVNSATRE 119 >gi|328675645|gb|AEB28320.1| Aminomethyltransferase (glycine cleavage system T protein) [Francisella cf. novicida 3523] Length = 358 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 41/102 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A FL+ ++ DV L A+ +L I+ + K++ + F Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVDAEHFR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 + ++ R+S + + +V I Q +V + Sbjct: 109 VVVNAGNRESDVAWFNQNIQKFDVTITPQTDLAIVAVQGPKA 150 >gi|71282177|ref|YP_268017.1| glycine cleavage system aminomethyltransferase T [Colwellia psychrerythraea 34H] gi|123633392|sp|Q486J8|GCST_COLP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|71147917|gb|AAZ28390.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H] Length = 362 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 101/306 (33%), Gaps = 44/306 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A + +L +G ++ +I + + Sbjct: 50 SHMTIVDVQGADAKAFLRRLVINDVAKLATPGKALYTGMLNEEGGVIDDLIIYFFSDTDY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------------- 108 L ++ + R + + ++ I +P G++ E Sbjct: 110 RLVVNSATRVKDLAWMTKQSTGFDITITERPEFGMLAVQGPEAKAKVAKLLTAEQIEAVE 169 Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 F D + + S + LR+ Sbjct: 170 GMKPFFGVQVGDLFIATTGYTGEDGYEIIVPNNSAEDFWQKLLDEGVVPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P A M T +IG++V++ + K ++ Sbjct: 230 EAGMNLYGLDM-DETVSPLAANMAWTISWEPTDRDFIGRDVLTAQKAAGDQPKLVGLVLE 288 Query: 210 TDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDK-VDHAIKKGMALTVHGVRV 264 + S ++T +I GT +G ++A+AR+ + V + + ++V Sbjct: 289 AKGVLRSHQVVVTEFGNGEITSGTFSPTLG-HSVALARVPRSVKVGDTIEVEMRKKLIKV 347 Query: 265 KASFPH 270 + + P Sbjct: 348 QVTKPS 353 >gi|322834191|ref|YP_004214218.1| glycine cleavage system T protein [Rahnella sp. Y9602] gi|321169392|gb|ADW75091.1| glycine cleavage system T protein [Rahnella sp. Y9602] Length = 365 Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E+ F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTVPGKALYTGMLNASGGVIDDLIVYFLNENYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + V + ++ +V + Sbjct: 110 RLVVNSATREKDLAWISQHAEPYAVELTVRDDLALVAVQGPQA 152 >gi|156100279|ref|XP_001615867.1| aminomethyl transferase domain containing protein [Plasmodium vivax SaI-1] gi|148804741|gb|EDL46140.1| aminomethyl transferase domain containing protein [Plasmodium vivax] Length = 535 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 43/181 (23%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT--------------------LPYKIAR-- 40 L N++ +++CG + FLQ++ T D+ L A Sbjct: 6 LCRLKNRTLVQICGTDSFRFLQSLTTNDLNKIITEKDFSLYKNVPKNVLSCLDDTSAYQL 65 Query: 41 --------------GSAILTPQGKILLYFLI----SKIEEDT---FILEIDRSKRDSLID 79 S L GKIL + EE++ F ++ + L+ Sbjct: 66 CGHNVKYKKWTKGLPSLFLQNNGKILADCFLYSVKYTHEENSFSLFYMDCNVKASRMLLS 125 Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139 L KL +V V + + E S + +++ Sbjct: 126 ILEKRKLSCDVHFSEMANIAVYQLLSGASVLRGGTSTAEVVSSGGDSATQLEDELPALSN 185 Query: 140 D 140 + Sbjct: 186 N 186 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 F + P D D LN ++ KGCY+GQE ++R ++ I K Sbjct: 327 FKFKDLSPFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINK 369 >gi|296242147|ref|YP_003649634.1| aminomethyltransferase [Thermosphaera aggregans DSM 11486] gi|296094731|gb|ADG90682.1| aminomethyltransferase [Thermosphaera aggregans DSM 11486] Length = 374 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 105/313 (33%), Gaps = 51/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEEDTF 65 S+ I + G +P Q + T DV + + L ++ ++ KI ++ + Sbjct: 54 SHMGRIVLRGPDVLPLAQYLYTKDVSKTKPSWMSGPTLALNQWARVKDDEMLYKISDEEW 113 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------------------NGVVLSWN-- 105 L + R+ +++ + +EI I + W Sbjct: 114 YLVTNALAREKMVNYIKSVIAEKKFKVEITDITLDTSMLAVQGPRAAELMEKIGAKWATD 173 Query: 106 --------QEHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIKTY 144 E+ + + R WG N + + Sbjct: 174 LKTLEFRMGENIGEVKTLLVSRSGWTGEDGFEIWGGHHEIKSIVEKLIANGAKPAGLIAR 233 Query: 145 HELRINHGIVDPNTDFLPSTI-FPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LRI G V + ++ + FP + L I+ K ++G+E + + + Sbjct: 234 DTLRIEMGFVLGDHEYGEDPLKFPCALSLRYGLGAITWEKKGFVGEEALRTCKREGVRWV 293 Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGM 255 R + G + +P +G P+ ++D+++G + + +A+A+A +D + + Sbjct: 294 RVGLKFGKEAGRLVPRTGMPVYSEDVQVGWITSGTFSPILNRAIAMAYVDSRYAVFGEEL 353 Query: 256 ALTVHGVRVKASF 268 + V + A Sbjct: 354 EVLVRDKKYSAKI 366 >gi|192361648|ref|YP_001980945.1| glycine cleavage system aminomethyltransferase T [Cellvibrio japonicus Ueda107] gi|238692442|sp|B3PI82|GCST_CELJU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|190687813|gb|ACE85491.1| glycine cleavage system T protein [Cellvibrio japonicus Ueda107] Length = 371 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY--KIARGSAILTPQGKILLYFLISKIEE 62 S+ + + V G A +LQ ++ DV L A S +L QG ++ ++ + + Sbjct: 50 SHMTVVDVTGSDAKAYLQYLLANDVAKLDNLVGKALYSGMLNEQGGVIDDLIVYNMGD 107 >gi|261749518|ref|YP_003257204.1| aminomethyltransferase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497611|gb|ACX84061.1| aminomethyltransferase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 367 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 105/314 (33%), Gaps = 58/314 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK++ FLQ T D+ + A+ S + G I+ +I KI E+ F+ Sbjct: 53 SHMGKFILKGKNSHNFLQYFTTNDLSNIKTGQAQYSCFINHLGGIIDDLVIYKISEEKFL 112 Query: 67 LEI------------------------DRSKRDSLI-----------DKLLFYKLRSNV- 90 L + D S+ SL+ KL L S + Sbjct: 113 LIVNAANIEKNKKWINDHLNHKNLTFIDSSQEYSLLAIQGPKSLYSIQKLTNISL-SKIP 171 Query: 91 ----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143 I VL +T S I R A+ + + E I + Sbjct: 172 FYCFEIGKFAEIDNVLISRTGYTGSKGVEIYIRNEYAENIWNEILKIGESFQIKPCGIAS 231 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D I P +A + + K +IG+E++ + + II+ Sbjct: 232 RDSLRLEMGYRLYGQDL-SEKITPIEAGLSWI--TKFNKK-FIGREILWNQKKKGIIKVY 287 Query: 204 PMIITGTDDLPPSGSPILTDDI--EIGTLGVVVG----KKALAIARIDKVDHAIKKGM-- 255 +P SG D+ +G + V KK + + I K + + K Sbjct: 288 IFSCRKKGKIPRSGYS-FKDEKNFTVGRVTSGVYSPVLKKGIGLGYITKNNFNLDKNSIF 346 Query: 256 -ALTVHGVRVKASF 268 ++ + ++ Sbjct: 347 VSIRNKNIPIQIVK 360 >gi|260469633|ref|ZP_05813797.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] gi|259028600|gb|EEW29912.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] Length = 371 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 50/305 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + G A + +I D + R S + G IL + ++ + F Sbjct: 51 LSTMGKMDIKGPDAEALVNHVIVNDAAAMKPGQVRYSTVCREDGGILDDLTVFRLGTEHF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------------QPINGVVLSWNQEHTF 110 +L R ++ LL + + + + ++ Sbjct: 111 MLVTGSVNRLKMLPWLLHHAEGRKAYVTDITAAVPFPTIQGPRSRDLLKALVRDADLDGL 170 Query: 111 SNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKT--YHELR--------------- 148 +F R VL+ RT G + +D + L Sbjct: 171 KRWAFTSGRVGETKVLISRTGVTGELGFELFVPADEAASVWERLMQAGRDFGLKPYGVLA 230 Query: 149 -----INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + D + P +D I KG +IG+E + +++ + + + Sbjct: 231 MFTLGLEKAYPAHGIDM-DESRTPFHVGLDRW--IKFDKGDFIGREALLKVRDKGLDERW 287 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263 ++ D + + ++ D + G + +L KV + T G Sbjct: 288 TGLVLDGDKPATTDARVMADGEDAGIVTYSDHGYSLG-----KVLATAHLRLPFTAIGTE 342 Query: 264 VKASF 268 + Sbjct: 343 LSIEI 347 >gi|184201792|ref|YP_001855999.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201] gi|183582022|dbj|BAG30493.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201] Length = 970 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 105/335 (31%), Gaps = 72/335 (21%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I++ G A FL + T L + R + TP G + + ++ Sbjct: 630 MDATTL---GKIEIRGTDAGEFLNRVYTNAFKKLKPGMGRYGVMCTPDGMVFDDGVTLRL 686 Query: 61 EEDTFILEIDRSKRDSLIDKL---------LFYKLRSNVI-------------------- 91 +ED +++ ++++ L ++V Sbjct: 687 DEDRYLMTTTTGNAAAVLEWLEEWSQTEWPELDVTFTSVTEQWTTVAVAGPRSRDVIAKL 746 Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-------LHRTWGHNEKIASDI 141 +++ +++ + S R S + L E + + Sbjct: 747 APQLDVSQDAFPFMAFRETVLASGVPARICRISFSGELAYEVNVSGWYGLSVWEDVFAAG 806 Query: 142 KTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 + + H LR D T+ P D M+ + +S TK +IG+ Sbjct: 807 EEFGITPYGTETMHVLRAEKAFPIVGQD-TDGTVTPQDLGMEWV--VSKTKD-FIGKRSY 862 Query: 192 SRIQHRNIIRKRPMIITGTD---------DLPPSGSPILTDDIE---IGTLGVVVGKKAL 239 R + RK+ + + TD L +G+P+ + +G + AL Sbjct: 863 DRPSATDPQRKQLVAVLPTDRVTRLPEGAQLIAAGTPVTPEQGPVPMVGHVTSAYRSAAL 922 Query: 240 ----AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270 +A ++ I + + + G V + Sbjct: 923 DRTFGLALVENGRQRIGETLQAPLDGTLVDVTIAE 957 >gi|332142281|ref|YP_004428019.1| glycine cleavage system aminomethyltransferase T [Alteromonas macleodii str. 'Deep ecotype'] gi|238693238|sp|B4RSJ5|GCST_ALTMD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|327552303|gb|AEA99021.1| glycine cleavage system aminomethyltransferase T [Alteromonas macleodii str. 'Deep ecotype'] Length = 359 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 11/106 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E + Sbjct: 50 SHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQ 106 L ++ + R+ ++ L+ S V I +P ++ Sbjct: 110 RLVVNSATREKDMNWLM-----SKAEGFDVTITERPEFAMIAVQGP 150 >gi|239996850|ref|ZP_04717374.1| glycine cleavage system aminomethyltransferase T [Alteromonas macleodii ATCC 27126] Length = 359 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 11/106 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E + Sbjct: 50 SHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQ 106 L ++ + R+ ++ L+ S V I +P ++ Sbjct: 110 RLVVNSATREKDMNWLM-----SKAEGFDVTITERPEFAMIAVQGP 150 >gi|114769342|ref|ZP_01446968.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] gi|114550259|gb|EAU53140.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] Length = 386 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 62/294 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 +++ G A F+Q + D+ L + I +G IL ++ ++EE+ F + Sbjct: 70 VEINGPDAAEFVQLLTPRDLSKLAVGQCKYIIITNAEGGILNDPVLLRLEENKFWISLAD 129 Query: 69 ---------------IDRSKRDSLIDKLL---------FYKLRSNVIIEIQPINGVVLSW 104 +D S + + L KL N I + W Sbjct: 130 SDILFWAQGLAINSGLDVSIHEPDVSPLQLQGPKSGKIMQKLFGN------GIKELKYYW 183 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELR 148 + + + R + L + + + +++ R Sbjct: 184 LEHLNLNGIDLVVSRTGWSSELGYEIYLQDSSRGTELWDTIMSAGKEFNLSPGHTSSIRR 243 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 I G++ + D P + +D L I L G +IG + +S+I+ + RK+ II Sbjct: 244 IEGGMLSYHADM-DILTNPFELGLDRL--IDLDSGQKFIGHDALSKIKANGVSRKQVGII 300 Query: 208 TGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 + L + I ++ IG + + ALA+ I+ + + Sbjct: 301 IDCEPLAGPNTTFWKITKNNKVIGKVTSAIYSPRLEKNIALAMMSIEYSEIDTR 354 >gi|13476081|ref|NP_107651.1| aminomethyltransferase [Mesorhizobium loti MAFF303099] gi|14026841|dbj|BAB53437.1| mll7302 [Mesorhizobium loti MAFF303099] Length = 381 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 58/306 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G + LQ +T DV L SA+ G ++ + ++ +D F Sbjct: 51 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 110 Query: 66 IL----EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94 ++ KL LR S + I Sbjct: 111 RWVGGDDLSGEWLRETAKKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVVWTSPLQPSI 170 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142 + + + + + R L + W EK+ I Sbjct: 171 DELEWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 230 Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +RI G++ +F T P +A + + +IG+E + R + Sbjct: 231 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKSKTDDFIGREALIRRKEH 289 Query: 198 NIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGV-----VVGKKALAIARIDKVDHAI 251 + + + ++ G + +IG + V+GK +A+AR+D AI Sbjct: 290 PQTK--LVGLDIDSNVAVGHGDCVHVGRAQIGVVTSGMRSPVLGKN-IALARLDVTHAAI 346 Query: 252 KKGMAL 257 + + Sbjct: 347 GTEVEI 352 >gi|154247113|ref|YP_001418071.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] gi|154161198|gb|ABS68414.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] Length = 772 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 98/315 (31%), Gaps = 59/315 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A LQ +T D+ L +A+ G ++ I ++ F Sbjct: 444 LSPLRKFEVTGPDAELLLQRTVTRDMRKLAVGQVVYTALTYDHGGMIDDATIFRLAPANF 503 Query: 66 ILEI--------------------------DRSKRDSLIDKLLFYKLRSNVI------IE 93 + D+ ++ L L + VI Sbjct: 504 RVVCGEEFTGAWLRDKAREWGLNAFVRSSTDQLHNIAVQGPLSREIL-AEVIWTGPTQPA 562 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139 I + + + + + R L + W H + + Sbjct: 563 IAELKWFRFAVARLGGPMGPALVVSRTGYTGELGYEIWCHPKDAGAVFDAVWAAGVPKGM 622 Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LRI G+V DF T P +A + ++ + ++G+ + R + Sbjct: 623 KPLGLAALDMLRIEAGLVFAGYDFCDQTD-PFEAGIGF--AVAEKEEDFVGKAALMRRKA 679 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIK 252 + + I G D + G P+ ++G + L A+ARID A Sbjct: 680 SPARKMVGLRIEGNDAVGH-GDPLYMGRAQVGVVTSATHSPILKGQIALARIDVAHGATG 738 Query: 253 KGMAL-TVHGVRVKA 266 + + + G++ + Sbjct: 739 TQVEIGKLDGLKKRI 753 >gi|326382501|ref|ZP_08204192.1| glycine cleavage system aminomethyltransferase T [Gordonia neofelifaecis NRRL B-59395] gi|326198620|gb|EGD55803.1| glycine cleavage system aminomethyltransferase T [Gordonia neofelifaecis NRRL B-59395] Length = 369 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 91/317 (28%), Gaps = 58/317 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A +T D+ + A+ + G ++ + + +D Sbjct: 52 SHLGKALVAGPGAAAFINATLTNDLGKIEPGKAQYTLCCNETGGVIDDLITYLVSDDEVF 111 Query: 67 LEIDRSKRD--------------SLIDKLLFYKLRS-------NVIIEI-QPINGVVLSW 104 L + + ++ D+ Y + + V+ + P +++ Sbjct: 112 LVPNAANTPAVVAALSAVAPEGIAITDQHRDYAVFAVQGPKSTEVLAALGLPTEMAYMAY 171 Query: 105 NQEHTFSNSSFID-----------------ERFSIADVLLHRTWGH---NEKIASDIKTY 144 +D R+ A ++ + + Sbjct: 172 ADASITVGGRDLDIRVCRTGYTGEHGYEVLPRWDDAGIVFDALLAEVTARGGQPAGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR G + I P A + K + G+E + + R R Sbjct: 232 DTLRTEMGYALHGHELSVD-ITPVQARSSW--AVGWDKPAFFGREALLAERETGPAR-RL 287 Query: 205 MIITGTDDLPPSGS---PILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257 + T P + +IG K+ +A+A ID V +KKG + Sbjct: 288 YGLRATGRGVPRADCTVHLEAGGEQIGVCTSGTFSPTLKQGIALAFID-VSSGVKKGAEV 346 Query: 258 TVH----GVRVKASFPH 270 V + + P Sbjct: 347 VVDVRGRALTCEVVLPP 363 >gi|153011184|ref|YP_001372398.1| glycine cleavage system aminomethyltransferase T [Ochrobactrum anthropi ATCC 49188] gi|151563072|gb|ABS16569.1| glycine cleavage system T protein [Ochrobactrum anthropi ATCC 49188] Length = 367 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 49/267 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ I++ G A L T D + L ++ + L G +L +++++ ED Sbjct: 56 SHMKLIEISGADAAALL--AETCPLDPIVLKEGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113 Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104 F++ + D+ I+ L ++ + +I + G L++ Sbjct: 114 FMVVANAGNADADIEHLTEAASGKDVKVNPLDRVFLALQGPEAEAVINDAGLAGAELAFM 173 Query: 105 ----------------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 E F DE A L + + LR Sbjct: 174 SGFEPKAGWFMTRSGYTGEDGFEIGVPADE----ARALAMKLLADERVEWIGLAARDSLR 229 Query: 149 INHGIVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + G+ D P T P A + + + K + G + V + KR + Sbjct: 230 LEAGLCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGL 287 Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGV 232 G+ + + +IGT+ Sbjct: 288 KPEGRQPVRGGADLFDESGRQIGTVTS 314 >gi|298492955|ref|YP_003723132.1| glycine cleavage system T protein ['Nostoc azollae' 0708] gi|298234873|gb|ADI66009.1| glycine cleavage system T protein ['Nostoc azollae' 0708] Length = 378 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 55/231 (23%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 I V G A +LQ+++TAD+ + + I G+ ED F + +D Sbjct: 158 LIAVQGPKATSYLQSLVTADLTPIKAFAHLETTIF---GRPAFLARTGYTGEDGFEVMVD 214 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 L +L GV+ L R Sbjct: 215 SEIGIELWQRL--------------YDAGVIPCG---------------------LGCR- 238 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 LR+ + D + P +A + L + TKG +IG+ V Sbjct: 239 --------------DTLRLEAAMALYGQDI-DDSTTPLEAGLGWLVNLD-TKGDFIGRSV 282 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + + + + + RK + T ++P G +L+ +G + L Sbjct: 283 LEQQKTKGVQRKLVGLQTQGRNIPRHGYSVLSSGKTVGQVTSGTFSPTLGY 333 >gi|163868818|ref|YP_001610044.1| glycine cleavage system aminomethyltransferase T [Bartonella tribocorum CIP 105476] gi|161018491|emb|CAK02049.1| glycine cleavage system T protein [Bartonella tribocorum CIP 105476] Length = 370 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 98/306 (32%), Gaps = 51/306 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL D L +R + +L Q IL +I+++EED F+ Sbjct: 59 SHMKLIAVEGAQAVEFLSYAFPIDAAALKIGQSRYNYLLNEQAGILDDLIITRLEEDRFM 118 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSW-------------------- 104 L + + +L R+ V E + V+L+ Sbjct: 119 LVANAGNAQADFVELEK---RA-VDFECHVIALERVLLALQGPEAAAVLADADLPGNELF 174 Query: 105 -------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150 Q+ + S + E V + EK+ SD + LR+ Sbjct: 175 FMQGFEPQQDWFITRSGYTGEDGFEIAVPIGHAHALAEKLLSDSRVEWIGLAARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G+ D P T P DA + G+ K + G + + R R + Sbjct: 235 AGLCLHGNDITPDTT-PIDAALTWAVPKGVR-EKAQFYGAKAFLEALQKGPARCRVGLKP 292 Query: 209 GTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261 T +G+ +L D EIG + G A+ I + L Sbjct: 293 QTRQPIRAGAVLLDDQGKEIGVVTSGGFGPSFDGPVAMGYVPIAYKVEGTEVFTELRGKK 352 Query: 262 VRVKAS 267 + + Sbjct: 353 IALSVH 358 >gi|260829623|ref|XP_002609761.1| hypothetical protein BRAFLDRAFT_280302 [Branchiostoma floridae] gi|229295123|gb|EEN65771.1| hypothetical protein BRAFLDRAFT_280302 [Branchiostoma floridae] Length = 874 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 77/280 (27%), Gaps = 54/280 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ ++ G + FL + +V S +LTP+G++ ISK+ ED Sbjct: 532 IDLTPFGKFEIKGPDSAKFLDHLCANNVPK--TGKTCISHMLTPRGRVYAELTISKLGED 589 Query: 64 TFILEIDRSKRDSLIDKLLFYKL-----------------------RS-----NVIIEIQ 95 F + + + L RS + Sbjct: 590 HFFAITGSGSEFHDLRWMEDHALKGGYDVTISNITDEVACLGIAGPRSRDVLEKLTSGDL 649 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA---------------SD 140 G + + R S L + E A D Sbjct: 650 SEEGFKFLAVHDISLGGVDVRAIRISYTGELGWELYHAREDTARLYEALMSAGQEFGLGD 709 Query: 141 IKTYHE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY LR+ G + P +A +D I L K +IG++ + ++Q Sbjct: 710 FGTYAMGSLRLEKGFRGWGAEMTVDN-NPLEAGLDFF--IKLNKPADFIGKQALQQLQQE 766 Query: 198 NIIRKRPMI---ITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + RK + + I +G Sbjct: 767 GLTRKLVCLTVEVEENGPDAEGNETIWHQGKVVGNTTSGA 806 >gi|90577968|ref|ZP_01233779.1| glycine cleavage system protein T2 [Vibrio angustum S14] gi|90441054|gb|EAS66234.1| glycine cleavage system protein T2 [Vibrio angustum S14] Length = 372 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 97/271 (35%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L+ ++ D++ LP R + G I +++ D Sbjct: 54 SHMGQVRLKGQNAATLLETLVPVDIVDLPEGKQRYAVFTNENGGIEDDLMVTNFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117 L ++ + ++ I L + L+ V +E+ ++ + S+ F+D Sbjct: 113 LVVNAACKEQDIAHLKAH-LKDGVELEVIEDRALLALQGPKAAMVLAELNPAVSDMVFMD 171 Query: 118 E---------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L NE + LR+ Sbjct: 172 AAKVTLLGVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202 G+ D P T P +A + G+ +G + G +++ ++Q + + RK Sbjct: 232 CGLCLYGHDLDP-TTTPFEASLMWAITPSRRAGGV--REGGFPGADIILEQLQTKQVSRK 288 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 R ++ ++ G+ + +D EIG + Sbjct: 289 RVGLVGQSNAPVREGTKLFDAEDNEIGIVTS 319 >gi|157372150|ref|YP_001480139.1| glycine cleavage system aminomethyltransferase T [Serratia proteamaculans 568] gi|166989730|sp|A8GIS1|GCST_SERP5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157323914|gb|ABV43011.1| glycine cleavage system T protein [Serratia proteamaculans 568] Length = 365 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + R+ + + + V + ++ +V + ++ Sbjct: 110 RLVVNSATREKDLAWIEEHAAPYGVALTVRDDLALVAVQGPQAKERAATLFTP 162 >gi|296268945|ref|YP_003651577.1| glycine cleavage system T protein [Thermobispora bispora DSM 43833] gi|296091732|gb|ADG87684.1| glycine cleavage system T protein [Thermobispora bispora DSM 43833] Length = 364 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 96/311 (30%), Gaps = 55/311 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A L + + L AR + I+ G I+ ++ ++ D + Sbjct: 49 LSHMGEIFVTGPQAGEALDYALVGHLSALAEGRARYTMIVNEHGGIIDDLIVYRLAGDEY 108 Query: 66 IL------------------------EIDRSKRDSLIDK--------LLF---------- 83 ++ DRS +LI L Sbjct: 109 LVVANAANTATVAAELTARAGSFDAQVTDRSAEYALIALQGPNSVAILQKLADTDVAPIP 168 Query: 84 -YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDI 141 Y +RS + ++ F+ ++A L + + Sbjct: 169 YYGVRS---GTVAGTPALIARTGYTGEDGFELFVRAEDAVATWQALTEAGTELGLVPVGL 225 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ + + P+DA + + + G ++G+ ++R R Sbjct: 226 AARDTLRLEAGMPLYGNELSTE-LTPYDAGLGRVVRLD-KPGDFVGRAALARAADTGPTR 283 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255 + ++ +P SG P+L D +G + A+A D V+ + + Sbjct: 284 RLVGLVARGRRVPRSGYPVLRDGRVVGEVTSGAPSPWLGKPIAMAYVSADAVEEGGELAV 343 Query: 256 ALTVHGVRVKA 266 + V Sbjct: 344 DIRGRQEPVDV 354 >gi|126317546|ref|XP_001381588.1| PREDICTED: similar to dimethylglycine dehydrogenase, [Monodelphis domestica] Length = 873 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 60/318 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS KV GK ++ L +I + + S +LTP+G++ +S+ Sbjct: 541 IDLSPFGKFKVRGKDSLKLLDRLIANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 598 Query: 64 TFILEIDRS--------------------KRDSLIDKL---------LFYKLRSNVIIEI 94 F+L + +++ D+L L+ + Sbjct: 599 EFLLVTGSGSELHDLRWIEEEIVKGGYNVEVENITDELGVLGVAGPSARRVLQ-KLTSAD 657 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------- 139 + ++ T SN + S L + E A+ Sbjct: 658 LSNDAFKFLQSKPLTISNIPVTAIKISYTGELGWELYHRQEDSATLYGAIMEAGQEEGID 717 Query: 140 DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQH 196 + TY + LR+ ++ T P +A +D I L K +IG++ + ++ Sbjct: 718 NFGTYAMNALRMEKAFRAWGSEMNCDT-NPLEAGLDHF--IKLNKPADFIGKQALRLMKE 774 Query: 197 RNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDH 249 + + R+ + TD + P G+ I D +G + A A ++ + Sbjct: 775 KGLKRRLVYLTLETDHVDPEGNESIWHDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSEV 834 Query: 250 AIKKGMALTVHGVRVKAS 267 + + L Sbjct: 835 GQRLEVELLGKNYPATII 852 >gi|254489967|ref|ZP_05103162.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxidans DMS010] gi|224465052|gb|EEF81306.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga thiooxydans DMS010] Length = 383 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 90/262 (34%), Gaps = 41/262 (15%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G SA+ L ++ DV L +R +A + G ++ ++ +DT+ L Sbjct: 71 IVNVTGPSALKVLDQLVAIDVTELEPGTSRLAAEVNEAGALVDDIMVICDAKDTYRLSHG 130 Query: 71 RSKRDSLIDKL---------LFYKLR-------SNVIIEIQPINGVVL-----SWNQEHT 109 + +L Y + +V I + P+ V L + E T Sbjct: 131 SGATQDTLARLAEGHDVQIAQDYDVHILSLQGPKSVDI-LDPVVDVDLKTLPYFKHVETT 189 Query: 110 FSNSSFIDERFSIADVLLHRTWGHN-----------------EKIASDIKTYHELRINHG 152 + R + + + I + + R+ Sbjct: 190 LFGCEVVISRGGYSGERGYEVYCSANDAVHLWDSILEKGHRYGAIPASWDSLDLTRVEAA 249 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ D P + M ++ KG YIG++ ++ ++ R ++ ++ ++ Sbjct: 250 LLFFPYDMPEGDTTPWEVNMGWCIDLN-KKGDYIGKQALTNLKGRERFKQAGLVCQSSEA 308 Query: 213 LPPSGSPILTDDIEIGTLGVVV 234 + G+ I+ D EIG + + Sbjct: 309 V-EIGAKIIKDGKEIGEVTSAI 329 >gi|224090905|ref|XP_002188408.1| PREDICTED: similar to dimethylglycine dehydrogenase [Taeniopygia guttata] Length = 836 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 99/319 (31%), Gaps = 62/319 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS KV G ++ L + V + S +LTP+GK+ +S++ Sbjct: 502 IDLSPFGKFKVKGTDSVKLLDHLFANVVPKV--GSTNISHMLTPRGKVYAELTVSQLFPG 559 Query: 64 TFILEI-DRSKRDSLIDKLLFYKLRS---NVIIEI-QPINGVVLSWNQEHT--------- 109 F+L S+ L + + ++R V IE GV+ Sbjct: 560 EFMLVTGSGSELHDL--RWIEEEIRRGGYKVEIENMTDEMGVLSVAGPYARQVLQKLTNE 617 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139 SN + R S L + E Sbjct: 618 DLSNASFKFLQCRHLKLSNIAVTAIRISYTGELGWELYHRKEDSVPLYSAIMEAGQKEGI 677 Query: 140 -DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195 D TY + LR+ G + T P +A ++ + L K + G++ + +I+ Sbjct: 678 DDFGTYALNALRLEKGFRAWGAEMNCDT-NPLEAGLEYF--VKLNKAADFTGKQALKQIK 734 Query: 196 HRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 + I R+ + TD++ P G+ + + IG A A ++ Sbjct: 735 EKGIKRRLVYLTLETDNVDPEGNESVWHNGKVIGNTTSGCFSYGAQKSLAFAYVPMELSK 794 Query: 249 HAIKKGMALTVHGVRVKAS 267 K + L Sbjct: 795 VGQKLEVELLGKNYPATII 813 >gi|195033602|ref|XP_001988718.1| GH10422 [Drosophila grimshawi] gi|193904718|gb|EDW03585.1| GH10422 [Drosophila grimshawi] Length = 415 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 94/304 (30%), Gaps = 59/304 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 V G A L++I TAD+L + + QG IL +++K+ + + Sbjct: 92 VRGSDAAACLESISTADILGMLPGAGSLTVFTNEQGGILDDLIVNKVSDKELYVVSNAAM 151 Query: 69 -----------------------------IDRSK--------RDSLIDKL-------LFY 84 +D+S L L Y Sbjct: 152 KQQDADIMSSAVSFFKSQGKDVSIEFLSPVDQSLIAVQGPQVAQELAKLLSQPKSLDQLY 211 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 +RS + E+ I V ++ + + L + + + Sbjct: 212 FMRSGI-FELAGIKNVRITRCGYTGEDGFEISVP-STKVESLTEALLAAGQLKLAGLGAR 269 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LR+ G+ +D + P +A + L G + G +++ + + R+R Sbjct: 270 DSLRLEAGLCLYGSDI-DAKTTPVEAALAWLVAKRRRSTGDFPGAQLILQQLKEGVQRRR 328 Query: 204 P-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMAL 257 + + G P +G I + ++G L + +A+ + + A + L Sbjct: 329 IGLQMLGAKPPPARAGVTIYSGGKQVGQLTSGCPSPTTGRNIAMGYVAEQLKAPGTQLEL 388 Query: 258 TVHG 261 V Sbjct: 389 KVRD 392 >gi|54023664|ref|YP_117906.1| glycine cleavage system aminomethyltransferase T [Nocardia farcinica IFM 10152] gi|59797669|sp|Q5YZ49|GCST_NOCFA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54015172|dbj|BAD56542.1| putative glycine cleavage system protein T [Nocardia farcinica IFM 10152] Length = 366 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 52/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A +T D+ + A+ + + G ++ + + +D Sbjct: 54 SHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIF 113 Query: 67 LEIDRSKRD--------------SLIDKLLFYKLR-------SNVIIEI------QPING 99 L + + ++ D+ Y + + V+ + + + Sbjct: 114 LVPNAANTAAVVAELAAAAPAGVTVTDQHRDYAVFAVQGPRSAQVLAALGLPTEMEYMAF 173 Query: 100 VVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTWGH---NEKIASDIKTYHELR 148 +W+ T + + R++ A+ + + + + LR Sbjct: 174 ADAAWDGRPIRVCRTGYTGEHGYEVLPRWADAEPVFRALLEQVRAADGQPAGLGARDTLR 233 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + I P A + K + G+ + + + R+ M + Sbjct: 234 TEMGYPLHGHELSRE-ISPVQARTGW--AVGWRKPQFWGKAALEQEKAAG-PRRILMGLK 289 Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH--- 260 D + G P+L D +G K +A+A +D ++ G + V Sbjct: 290 AIDRGVLRQGQPVLRDGEPVGETTSGTFSPTLKVGIALALLD-TGAGLEPGAEVAVDVRG 348 Query: 261 -GVRVKASFPH 270 +R + P Sbjct: 349 RRLRCEVVKPP 359 >gi|54296113|ref|YP_122482.1| glycine cleavage system aminomethyltransferase T [Legionella pneumophila str. Paris] gi|61213305|sp|Q5X8W1|GCST_LEGPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|53749898|emb|CAH11280.1| hypothetical protein lpp0132 [Legionella pneumophila str. Paris] Length = 360 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 99/313 (31%), Gaps = 53/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 + ++ + R + + + R+ V ++ + ++ S + Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164 Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144 F DV L + + Sbjct: 165 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLNAGVTPCGLGAR 224 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ D T P ++ + +IG ++ + + I RK Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALASQKQQGIKRKMV 283 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + G ++ + G + +++A+AR+ V+ + + + Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342 Query: 261 GVRVKASFPHWYK 273 + K P + K Sbjct: 343 LIPAKVGKPRFIK 355 >gi|331006917|ref|ZP_08330162.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma proteobacterium IMCC1989] gi|330419237|gb|EGG93658.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma proteobacterium IMCC1989] Length = 378 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 106/310 (34%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G + L+ ++ DV L + + G IL +I++ EDTF Sbjct: 57 SHMGQLTVSGDGIVEALEKLLPIDVGALDIHQQSYALLTNDDGGILDDLIITRWAEDTFF 116 Query: 67 LEIDRSKRDSLIDKLLFY-------KLRSNVIIEIQP-----INGVVLSWNQEHTFSNSS 114 + ++ + ++ I + L S ++ +Q + V+ E TF + Sbjct: 117 IVVNAACKEQDIAHFRKHLPNATIEILSSRALVALQGPSAKNVAEVIAPIACELTFMHGC 176 Query: 115 FI--------------------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148 F+ ++ F I AD + + A + LR Sbjct: 177 FVTVDCNGTAVECYFTRSGYTGEDGFEISIPNEHADAVARLLLSFDCVEAIGLGARDSLR 236 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKR 203 + G+ D T P DA + S G ++G + + + RKR Sbjct: 237 LEAGLCLYGHDMNTET-NPIDASLLWSISKSRRPDGAKAGGFLGTDNIFSSIEKGSDRKR 295 Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258 ++I G + + DD +G + K +AI +K A+ + Sbjct: 296 VGLLIDGRAPVREGAVLVDADDNTVGVVTSGGFGPSINKPIAIGYANKTSAALGTELFAL 355 Query: 259 VHGVRVKASF 268 V G ++ S Sbjct: 356 VRGKKLPVSV 365 >gi|157376807|ref|YP_001475407.1| glycine cleavage system aminomethyltransferase T [Shewanella sediminis HAW-EB3] gi|189039475|sp|A8FZK6|GCST_SHESH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157319181|gb|ABV38279.1| glycine cleavage system T protein [Shewanella sediminis HAW-EB3] Length = 364 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 46/308 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLTDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V I +P ++ + + F D + + + Sbjct: 110 RVVVNSATREKDLAWIAEQVKGFDVEIVERPELAMIAVQGPNAKAKAATVFNDAQNAAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + + LR+ Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPEDEAQALWQGLLEAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P A M + G+E ++ I+ + +I+ Sbjct: 230 EAGMNLYGLDM-DETVNPLAANMGWTIAWEPQDRDFNGREALAAIKAAGTEKLVGLIMEA 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHAIKKGMALTVHGV 262 + P S TD + G + ++A+AR+ + + + V Sbjct: 289 KGVIRPGMSVFFTDGEGVEQQGTITSGTFSPTLGYSIAMARVPRSIGD-TAEVEMRKKRV 347 Query: 263 RVKASFPH 270 VK P Sbjct: 348 SVKVVAPS 355 >gi|89093756|ref|ZP_01166702.1| aminomethyltransferase [Oceanospirillum sp. MED92] gi|89081886|gb|EAR61112.1| aminomethyltransferase [Oceanospirillum sp. MED92] Length = 368 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 49/311 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS-----KI 60 S+ + + V G A +L+ ++ DV L A S +L ++ ++ + Sbjct: 50 SHMTVVDVTGTDAKEYLRYLLANDVAKLQQKGKAMYSGMLNEDAGVIDDLIVYLMTEPGV 109 Query: 61 EEDTFILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFIDE 118 + F + ++ + R+ + + +V + QP V + + + S + Sbjct: 110 AGEWFRVVVNCATREKDLRWMSDQTASFDDVALTEQPDLAMVAVQGPKALELAKQSVSES 169 Query: 119 RFSIADVL-----------------------------------LHRTWGHNEKIASDIKT 143 R ++ D L + + Sbjct: 170 RATLIDQLSVFQGLESEGWFIARTGYTGEDGLEIMLPEDEVADFWQALADAGVSPCGLGA 229 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G+ D T+ P A M + +IG+E + + I K Sbjct: 230 RDTLRLEAGMNLYGADM-DETVSPLAANMGWTIAWEPQERIFIGREALQAKKEAGISEKL 288 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTV 259 ++ + + + ++ + G + A+A+AR+ A + + + Sbjct: 289 VGLVMESRGVLRAHQKVVVSGVGEGEITSGTFSPTLGCAIAMARV-PSATADQAEVDIRG 347 Query: 260 HGVRVKASFPH 270 V V+ P Sbjct: 348 KLVPVRVIRPS 358 >gi|224001432|ref|XP_002290388.1| sarcosine dehydrogenase [Thalassiosira pseudonana CCMP1335] gi|220973810|gb|EED92140.1| sarcosine dehydrogenase [Thalassiosira pseudonana CCMP1335] Length = 895 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 55/277 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + TA+V + L G++ ++K++ED F++ + Sbjct: 571 VTGNDAGTFLNYLSTANVDD-ECGTITYTQWLNEGGRMEADLTVAKLKEDKFLVVASDTM 629 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------TFSNSSF 115 + ++ + +++ N + + + G N + F +++ Sbjct: 630 HNQVLSHM-RHRISRNDHVYVSDVTGTYAQLNLQGPKSRKLLQQLTSVDMDMLPFRSATE 688 Query: 116 IDE--------RFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRIN 150 ID R + L + + E + + ++ LR+ Sbjct: 689 IDLGYARVWCMRITYVGELGYEVYIPVENASYCYDLIVERGESFGMAHAGLRALGSLRLE 748 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR----IQHRNIIRKRPM 205 G D D + + + K +IG++ V + + + +R+R + Sbjct: 749 KGYRDFGHDMDNTDTL-LECGLSFTC--DFGKPVGFIGKDEVLKEKELSKSQGGLRRRMV 805 Query: 206 IITGTDDLP--PSGSPILTDDIEIGTLGVVVGKKALA 240 + +D P G + + +G + L Sbjct: 806 NVLVSDPKPLLHHGEILWRNGRRVGDIRSASYGHTLG 842 >gi|260205508|ref|ZP_05772999.1| glycine cleavage system aminomethyltransferase T [Mycobacterium tuberculosis K85] Length = 367 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 64/317 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--------------RI 194 G + I P A + K + G+ + R+ Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAEPRRLLRGLRM 291 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKK 253 R ++R ++ G + + + S + +++G LA+ D ++ + Sbjct: 292 VGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVG--------IGLALIDSDAGIEDGQQI 343 Query: 254 GMALTVHGVRVKASFPH 270 + + V + P Sbjct: 344 NVDVRGRAVECQVVCPP 360 >gi|254386545|ref|ZP_05001846.1| aminomethyltransferase [Streptomyces sp. Mg1] gi|194345391|gb|EDX26357.1| aminomethyltransferase [Streptomyces sp. Mg1] Length = 371 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G A+ L A++ + T+ AR + I G I+ ++ ++ E Sbjct: 52 LSHMGEITLTGPEAVKALDYALVGN-ISTVGVGRARYTHICQEDGGIVDDLIVYRLGETE 110 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 F++ + S ++D L V+ + + ++ E +S D Sbjct: 111 FMVVANASNAQVVLDALTERAAGFDTVVRDDRDAYALLAVQGPESPGILASLTDADLDGL 170 Query: 121 ----------SIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146 + L+ RT E ++ + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPEHAVELWQALTKAGEGVGLVPAGLSC 230 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG--QEVVSRIQHRNII 200 LR+ G+ + ++ P DA + + + K G ++G + + Sbjct: 231 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFEKEGDFVGRAALEAAAERAAGNP 287 Query: 201 RKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 ++ + + +P +G P++ IG + L A+A +D A Sbjct: 288 PRKLVGLIAEGRRVPRAGFPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 342 >gi|270264929|ref|ZP_06193193.1| aminomethyltransferase [Serratia odorifera 4Rx13] gi|270041227|gb|EFA14327.1| aminomethyltransferase [Serratia odorifera 4Rx13] Length = 365 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + RD + + + + + ++ +V + ++ Sbjct: 110 RLVVNSATRDKDLAWIEEHAAPYGIELRVRDDLALVAVQGPQAKERAATLFTP 162 >gi|52627484|gb|AAU26225.1| glycine cleavage system T protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 367 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 98/317 (30%), Gaps = 61/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D + Sbjct: 57 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 + ++ + R + + + R+ V ++ + ++ S + Sbjct: 117 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 171 Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144 F DV L H + Sbjct: 172 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLHAGVTPCGLGAR 231 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ D T P ++ + +IG + + + I RK Sbjct: 232 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 290 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + G ++ + G + +++A+AR+ ++ G + V Sbjct: 291 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-----PMETGEQVLVD 345 Query: 261 ----GVRVKASFPHWYK 273 + K P + K Sbjct: 346 IRGKLIPAKVGKPRFIK 362 >gi|148262422|ref|YP_001229128.1| glycine cleavage system T protein [Geobacter uraniireducens Rf4] gi|146395922|gb|ABQ24555.1| glycine cleavage system T protein [Geobacter uraniireducens Rf4] Length = 363 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 86/249 (34%), Gaps = 41/249 (16%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LI 78 L+ + T V ++P +R +L G I+ ++ ++ ED ++ ++ + D+ + Sbjct: 68 LENVFTFSVKSIPVGRSRYGFLLNENGGIIDDLIVFRLAEDAVMIVVNAATIDNDFSVIQ 127 Query: 79 DKLLFYKLRS-------NVIIE-IQPINGVVLSWNQEHT-----------FSNSSFIDER 119 +L + S + I+ + +V ++ E I R Sbjct: 128 SRLKPGGVFSNTSADTGKLDIQGPLSRDVLVQAFGPEIGKIPYFKFIRMNILGVEAIVSR 187 Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165 L + + +K+ + + LR+ G +D Sbjct: 188 TGYTGELGYEIFLPAQKVVELWDLLLGDERVKPAGLGARDVLRLEVGYSLYGSDI-DEVT 246 Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 P +A + ++ K ++G+E + + Q + + + + P I ++ Sbjct: 247 TPLEAGLGAF--VNFDKQ-FVGREALLKQQQTGLTKAKAAFQVSSRRAPRHHYEICSEGA 303 Query: 226 EIGTLGVVV 234 +GT+ V Sbjct: 304 AVGTVTSGV 312 >gi|167762610|ref|ZP_02434737.1| hypothetical protein BACSTE_00966 [Bacteroides stercoris ATCC 43183] gi|167699716|gb|EDS16295.1| hypothetical protein BACSTE_00966 [Bacteroides stercoris ATCC 43183] Length = 363 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + +V L + + G I+ L+ + E++ ++L ++ S Sbjct: 56 VKGPHALDFLQTVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYRYEQEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D++ ++ I +Q + V LS +TF++ F Sbjct: 116 IEKDWNWCMSHNTMGAELENASDRMAQLAVQGPKAIEALQKLTPVNLSELSYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E I + G E + IK ++ LR+ G Sbjct: 176 AGEPDVIISNTGYTGAGGFELYFYPEAAIKIWNAVFEAGAEFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K +I + ++ + + +RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FINRPMLEKQKTEGTVRKLVGFEMVDRG 293 Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + + IG + + + + + + + ++ Sbjct: 294 IPRHGYELQNPEGTPIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVRPP 358 >gi|13474013|ref|NP_105581.1| aminomethyltransferase [Mesorhizobium loti MAFF303099] gi|14024765|dbj|BAB51367.1| aminomethyltransferase [Mesorhizobium loti MAFF303099] Length = 375 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 98/318 (30%), Gaps = 63/318 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + G A + +I D + + R S + G I+ + ++ + F Sbjct: 55 LSTMGKMDIKGPDAEALVNHVIVNDAVAMKPGQVRYSTVCREDGGIMDDLTVFRLGPEHF 114 Query: 66 ILEIDRSKRDSLIDKLLFYKL---------------------RS----NVIIEIQPINGV 100 +L R ++ L + RS +I ++G+ Sbjct: 115 MLVTGSVNRLKMLPWLQHHAQGRKAYVTDITAAVAFPTIQGPRSRELLKAMISDADLDGL 174 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELR---------- 148 + F++ R I+ + G + +D + L Sbjct: 175 -----KRWAFTSGHVNGTRVLISRTGVTGELGFELFVPADEAASVWDTLMRAGKDFGLKP 229 Query: 149 ----------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + D T P +D I KG +IG+E + +I+ + Sbjct: 230 YGVLAMFTLGLEKAYPAHGIDM-DETRTPFHVGLDRW--IKFDKGDFIGREALLKIRDKG 286 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH------AIK 252 + + +I + + + +L D + G + ++ ++ H AI Sbjct: 287 LDERWTGLILDGNKPAATDARVLADGEDAGIVT--YSDHGYSLGKVLATAHLRLPFTAIG 344 Query: 253 KGMALTVHGVRVKASFPH 270 +++ + G +A Sbjct: 345 TELSIDIDGRPTRAVVAP 362 >gi|254524776|ref|ZP_05136831.1| glycine cleavage system T protein [Stenotrophomonas sp. SKA14] gi|219722367|gb|EED40892.1| glycine cleavage system T protein [Stenotrophomonas sp. SKA14] Length = 370 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 1/124 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F Sbjct: 50 SHMTVVDLRGDQVKPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ S R+ + L V ++ +P ++ + E A Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVSVQQRPDLAILAVQGPQARDIVIGLAGEADRAALG 169 Query: 126 LLHR 129 L R Sbjct: 170 KLGR 173 >gi|270158570|ref|ZP_06187227.1| glycine cleavage system T protein [Legionella longbeachae D-4968] gi|289166599|ref|YP_003456737.1| glycine cleavage system protein T [Legionella longbeachae NSW150] gi|269990595|gb|EEZ96849.1| glycine cleavage system T protein [Legionella longbeachae D-4968] gi|288859772|emb|CBJ13753.1| putative glycine cleavage system protein T [Legionella longbeachae NSW150] Length = 360 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G FL+ ++T DV L + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDVLGAGCRQFLRKLLTNDVDLLEHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDSLIDKLLF 83 + ++ + R++ + + Sbjct: 110 RIILNSATRENDLAWIRK 127 >gi|229270459|ref|YP_094172.2| glycine cleavage system aminomethyltransferase T [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|61213326|sp|Q5ZZ93|GCST_LEGPH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 360 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 98/317 (30%), Gaps = 61/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 + ++ + R + + + R+ V ++ + ++ S + Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164 Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144 F DV L H + Sbjct: 165 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLHAGVTPCGLGAR 224 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ D T P ++ + +IG + + + I RK Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + G ++ + G + +++A+AR+ ++ G + V Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-----PMETGEQVLVD 338 Query: 261 ----GVRVKASFPHWYK 273 + K P + K Sbjct: 339 IRGKLIPAKVGKPRFIK 355 >gi|312216620|emb|CBX96570.1| similar to glycine cleavage T protein (aminomethyl transferase) [Leptosphaeria maculans] Length = 850 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 85/272 (31%), Gaps = 55/272 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A LQ + T+D+ + ++ G +L +S++E++ + ++ + Sbjct: 515 EISGPGATNLLQGLTTSDISK-KPGNITHTLLVDAYGGVLSDIFVSRLEDNVY--QVGAN 571 Query: 73 KRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEH-----TFSNSSFIDERF 120 L+ + +S +I + W T S+ F ++ Sbjct: 572 TATDLVHLARKARKQSKETPSQWAQVRDITGSTCCLGLWGPRAGDVILTVSSEDFSNKGL 631 Query: 121 SIADV-------------------------------------LLHRTWGHNEKIASDIKT 143 V +L ++ + +A+ Sbjct: 632 PYMGVKKTIIAGIPVTMFRKSFVGEYGWEIQTSPEYGLRLWDMLWQSGQPHGLVAAGRAA 691 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202 ++ LRI GI +D P +A + + K Y+G+ + + + R+ Sbjct: 692 FNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQLD-KKTDYVGKTALEHLSKKAPKRRL 749 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R +I+ + P+ G + Sbjct: 750 RCLIVDDGRSMILGKEPVFVAGKRAGYVTSAA 781 >gi|289574897|ref|ZP_06455124.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis K85] gi|289539328|gb|EFD43906.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis K85] Length = 379 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 64/317 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + +T D+ + A+ + T G ++ + + +D Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q V+ + + Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148 D +S V + RT E + + LR Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--------------RI 194 G + I P A + K + G+ + R+ Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAEPRRLLRGLRM 303 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKK 253 R ++R ++ G + + + S + +++G LA+ D ++ + Sbjct: 304 VGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVG--------IGLALIDSDAGIEDGQQI 355 Query: 254 GMALTVHGVRVKASFPH 270 + + V + P Sbjct: 356 NVDVRGRAVECQVVCPP 372 >gi|227819885|ref|YP_002823856.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234] gi|36958750|gb|AAQ87218.1| Dimethylglycine dehydrogenase [Sinorhizobium fredii NGR234] gi|227338884|gb|ACP23103.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234] Length = 815 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 55/291 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +++ I++ G+ A FLQ + + + + +L +G I ++++ + F Sbjct: 489 MTSFGKIRIEGRDATAFLQRVCANQMD-VEPGRIVYTQMLNQRGGIESDLTVTRLSQTAF 547 Query: 66 ILEIDRSKRDSLIDKLLF------YKLRSNVIIEIQ------PINGVVLSWNQEHTFSNS 113 + + + L + + ++V P V++ + FSN Sbjct: 548 FAVVPGATLQRDLAWLRKQLRPEEFVVITDVTASESVLVLMGPKARNVITRVSPNDFSNE 607 Query: 114 SFI---------------DERFSIADVLLHRTWGHNEKIA-----------------SDI 141 SF R + L + +++ A + Sbjct: 608 SFPFGTAQEIEIGMGLARAHRVTYVGELGWELYVSSDQTAHVFEAIEEAGKSSGLKLCGL 667 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI D +A + + KG +IG++ V R + + R Sbjct: 668 HALDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTAKGEFIGRDAVLRKREEGLKR 724 Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID 245 + + + L ++ D + + G L D Sbjct: 725 RLVQFRLKDPEPLLFHNEALVRDGKIVSIVTSGNYGHHLGGAIGLGYVPCD 775 >gi|317493818|ref|ZP_07952235.1| glycine cleavage system T protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918145|gb|EFV39487.1| glycine cleavage system T protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L ++ ++ +EE+ F Sbjct: 50 SHMTIVDLRGPRTREFLRYLLANDVAKLTVPGKALYTGMLNASAGVIDDLIVYFLEEEYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + +V I ++ ++ + ++ Sbjct: 110 RLVVNSATREKDLAWITEHAEPYHVDITVRDDLALIAVQGPQAQERAATL 159 >gi|29833493|ref|NP_828127.1| sarcosine dehydrogenase [Streptomyces avermitilis MA-4680] gi|29610616|dbj|BAC74662.1| putative sarcosine dehydrogenase [Streptomyces avermitilis MA-4680] Length = 818 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 59/306 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ FL + T ++ + +L G I ++++ D F + Sbjct: 512 LEVSGPGALDFLHRMTTNNLRK-KPGAVTYTLLLDHTGGIRSDLTVARLGPDRFQV---G 567 Query: 72 SKRDSLIDKLLFYK------------------------------------------LRSN 89 + + +D L + R+ Sbjct: 568 ANSPADLDWLTRHAPDGVHIRDITSGTCCIGVWGPLARDLVQPLTRDDFSHEGFGYFRAK 627 Query: 90 VI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 + P+ + LS+ E + + D + D L + IA+ ++ LR Sbjct: 628 ETYLGHVPVTAMRLSYVGELGWELYTTADLGLRLWD-TLWEAGRKHGVIAAGRSAFNSLR 686 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G TD P +A + + + K ++G+E + +R + Sbjct: 687 LEKGYRAWGTDMTDEHD-PFEAGVGF--AVRMDKE-FVGREALDAA---APPTRRLTPLL 739 Query: 209 GTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH--GVRV 264 D P+ D + G + L + G + + G +V Sbjct: 740 LDDPAANVLGKEPVYVDGVPSGYVTSASYGYTLGRCVAYAWLPPLATGTGVHIEYFGEKV 799 Query: 265 KASFPH 270 A+ Sbjct: 800 PATVAE 805 >gi|302558258|ref|ZP_07310600.1| glycine cleavage system T protein [Streptomyces griseoflavus Tu4000] gi|302475876|gb|EFL38969.1| glycine cleavage system T protein [Streptomyces griseoflavus Tu4000] Length = 372 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 95/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + ++ AR + I G IL ++ ++ + Sbjct: 53 LSHMGEIAVTGPQAAALLDHALVGN-IGSVKPGRARYTMICREDGGILDDLIVYRLGDTE 111 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 +++ + S ++D L + + + ++ E S D Sbjct: 112 YLVVANASNAQVVLDALRERTAGFDAEVRDDRDAYALLAVQGPESPAILKSLTDADLDGL 171 Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146 + L+ RT E K ++ + Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLVPCGLSC 231 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + ++ P DA + + + K G ++G+ ++ R Sbjct: 232 RDTLRLEAGMPLYGNELST-SLTPFDAGLGRV--VKFEKEGDFVGRAALAEAAERAASEP 288 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 R ++ +P SG ++ IG + L A+A +D A Sbjct: 289 PRVLVGLVAEGRRIPRSGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 343 >gi|116619623|ref|YP_821779.1| glycine cleavage system aminomethyltransferase T [Candidatus Solibacter usitatus Ellin6076] gi|116222785|gb|ABJ81494.1| glycine cleavage system T protein [Candidatus Solibacter usitatus Ellin6076] Length = 367 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 47/270 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G A + T V L A S +L G + L+ K+ +D F Sbjct: 55 SHMGEIEIRGPEAAKLTDHVTTNAVHKLKLGQAHYSGLLYEHGGFVDDILVHKVADDHFF 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWNQEHTFSNS---- 113 L ++ S +D + + + V+ I IQ + Sbjct: 115 LCVNASNQDKDFEHIRAHNKFDAVVENNGDRYAQIAIQGPKAAATLQKLTPVDLGAIKYY 174 Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNTDF--------- 160 F D S + T E + Y +R+ ++D +F Sbjct: 175 WFTDGEVSGTPARIAHTGYTGED---GFEIYVPPSEAVRMWQLVMDAGAEFGIKPCGLGA 231 Query: 161 ----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 + ++I P +A + + + L KG ++G + + + I RK Sbjct: 232 RNTLRLEAKMALYGHEIDASISPLEADLGWI--VKLDKGEFVGSAALRKQKESGIQRKLI 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + G + D G + Sbjct: 290 GFEMCARGIGRDGYEVFLDGAAAGWVTSGS 319 >gi|226945249|ref|YP_002800322.1| glycine cleavage system T protein [Azotobacter vinelandii DJ] gi|226720176|gb|ACO79347.1| glycine cleavage system T protein [Azotobacter vinelandii DJ] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDT 64 L++ + + G FL ++ D+ L + + +L G ++ ++ +++ D Sbjct: 52 LTH---LDIQGPDTRKFLLRLLANDIDRLDRPGKSLYTTMLNDDGGVMDDLIVHRLDYDR 108 Query: 65 FILEIDRSKRDSLIDKLL 82 + L ID + D + + Sbjct: 109 YRLIIDADRSDRDLAWIK 126 >gi|170023116|ref|YP_001719621.1| glycine cleavage system aminomethyltransferase T [Yersinia pseudotuberculosis YPIII] gi|238688502|sp|B1JNS6|GCST_YERPY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169749650|gb|ACA67168.1| glycine cleavage system T protein [Yersinia pseudotuberculosis YPIII] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ ++ + Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152 >gi|110835455|ref|YP_694314.1| glycine cleavage system T protein [Alcanivorax borkumensis SK2] gi|122959246|sp|Q0VLA6|GCST_ALCBS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|110648566|emb|CAL18042.1| glycine cleavage system T protein [Alcanivorax borkumensis SK2] Length = 359 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 45/278 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + + G A +L+ ++ DV + A + +L G ++ ++ K + D + Sbjct: 50 SHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYKRDND-YR 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--- 123 L ++ + R++ + + + V I +P ++ + + ++ + A Sbjct: 109 LVVNCATRETDLGWMEKHAGGFAVDIHERPELAMLAIQGPKARDILAGLLNGSRADAVKS 168 Query: 124 ----------DVLLHRTWGHNE-------KIASDIKTY----------------HELRIN 150 D ++ RT E A + + LR+ Sbjct: 169 LKVFAFAEDGDWMIARTGYTGEDGVEIMLPNADALTLWEQLLEAGVSPIGLGARDTLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D +I P +A M ++ + +IG++ + + + +I+ G Sbjct: 229 AGLNLYGNDM-DESITPWEANMGWTVMLNDRE--FIGRQPLLNQKENGHSEQVGLILEGK 285 Query: 211 DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244 L ++ + E GT +GK +A+AR+ Sbjct: 286 GVLRAHQKVLMPNGEEGEITSGTFSPTLGKS-IALARL 322 >gi|91763114|ref|ZP_01265078.1| aminomethyl transferase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717527|gb|EAS84178.1| aminomethyl transferase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 380 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 102/294 (34%), Gaps = 70/294 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A F+Q + D+ L + I+ G IL ++ +++E+ + L + D Sbjct: 67 VEITGPDATKFIQLLTPRDLSKLAVGQCKYVLIVNNDGGILNDPVLLRLKENHYWLSLAD 126 Query: 71 RSKRDSLIDKLLFYKLRSN---------VII---EIQP-------------------ING 99 L + V I ++ P IN Sbjct: 127 SDIL-----------LWAQGVAINSGLNVKIIEPDVSPLQLQGPNSGKIMEALFGESIND 175 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN--------EKIASDIKTYHE----- 146 + W +E I R + L + + + EKI + K+Y Sbjct: 176 LKYYWLRELDLDGIPLIVSRTGWSSELGYELYLRDGSKGDELWEKIMAAGKSYGLKPGHT 235 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 RI G++ + D +T P++ + L + +IG++ + +I + RK+ Sbjct: 236 SSIRRIEGGMLSYHADADINT-NPYELNLGRLVNLDTDIN-FIGKDALQKINKDGVKRKQ 293 Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 +I D L + IL D +G + V ALA+ I+ + Sbjct: 294 VGMILDCDPLTGPNTTFWEILKDKQIVGKITSAVYSPRLKQNIALAMVTINNSE 347 >gi|301308815|ref|ZP_07214767.1| glycine cleavage system T protein [Bacteroides sp. 20_3] gi|300833339|gb|EFK63957.1| glycine cleavage system T protein [Bacteroides sp. 20_3] Length = 361 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 54/307 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++ Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94 K ++ +L L S + E Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFITGEF 175 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRIN 150 V++S + + + K + LR+ Sbjct: 176 AGCKNVIISNTGYTGAGGFELYF--YPSDGMTIWNAIFEAGKPEGIKPIGLGARDTLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G D T P +A + + + K + + + R + + RK Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQE 291 Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 +P G I + IG + + + + + + ++ Sbjct: 292 KGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLK 351 Query: 264 VKASFPH 270 + Sbjct: 352 AQVVKAP 358 >gi|188534918|ref|YP_001908715.1| glycine cleavage system aminomethyltransferase T [Erwinia tasmaniensis Et1/99] gi|238689740|sp|B2VF35|GCST_ERWT9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|188029960|emb|CAO97844.1| Aminomethyltransferase (Glycine cleavage system T protein) [Erwinia tasmaniensis Et1/99] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 99/308 (32%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A SA+L ++ ++ I ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSAMLNASAGVIDDLIVYFISEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSIA 123 L ++ + R+ + ++ + V + + ++ S D +R +++ Sbjct: 110 RLVVNSATREKDLAWIVEHAAAYGVQLTERDDLSLIAVQGPNAQQKAQSVFDDAQRDAVS 169 Query: 124 ---------------------DVLLHRTWGHNEKIASDIKTY-------------HELRI 149 + NE A + LR+ Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNELAAEFWQQLLAAGVRPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + + P A M G + +IG+E++ + + R Sbjct: 230 EAGMNLYGQEM-DEKVSPLAANMSWTIGWEPSDRQFIGREMLEIQRTKGTERLVGLIMTE 288 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 K + + +L I G+ +G +A+AR+ + + + Sbjct: 289 KGVLRNALPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGEQAVVQIRNRA 346 Query: 262 VRVKASFP 269 + V + P Sbjct: 347 MPVTVTKP 354 >gi|119503920|ref|ZP_01626002.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] gi|119460428|gb|EAW41521.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] Length = 395 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 101/303 (33%), Gaps = 49/303 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F+Q + D+ L + I G IL ++ ++ ED F L + Sbjct: 71 VQITGPDAARFVQLLTPRDLSKLAVGQCKYVMITNNDGCILNDPVLLRLAEDKFWLSLAD 130 Query: 72 SK----RDSLIDKLLFYK---------LR---------SNVIIEIQPINGVVLSWNQEHT 109 S + L+ + V+ I + W +E+T Sbjct: 131 SDILLWAQGVAVNAGMDVHICEPDVSPLQLQGPNSGEIAKVLFG-DDIADLRYYWLREYT 189 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGI 153 I R + L + + + D+ RI G+ Sbjct: 190 LDGIPLIVSRTGWSSELGYEIYLLDGSRGDDLWEAIMAAGEPFGLKPGHTSTIRRIEGGM 249 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + + D + P + + I ++G+ ++ I+ + R++ + + L Sbjct: 250 LSYHADM-DNQTNPFEVGLGHWAAIDTDLE-FVGKAALTAIRDAGVTRQQVGLEIDGEAL 307 Query: 214 PPSGS---PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV-HGVRVK 265 P + + D+ +G + V L A+A +D A+ +A+ + GVR+ Sbjct: 308 PAPNTRFWELSVDEAPVGKVTSAVYSPRLKKNIALAMVDCAAAALGTEIAVAMPDGVRLA 367 Query: 266 ASF 268 Sbjct: 368 TVV 370 >gi|90019987|ref|YP_525814.1| glycine cleavage system aminomethyltransferase T [Saccharophagus degradans 2-40] gi|123396728|sp|Q21NX7|GCST_SACD2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|89949587|gb|ABD79602.1| glycine cleavage system T protein [Saccharophagus degradans 2-40] Length = 363 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 92/281 (32%), Gaps = 44/281 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLIS------- 58 S+ + + V G A FLQ ++ DV L A S +L +G ++ ++ Sbjct: 50 SHMTVVDVTGAGAKTFLQYVLANDVAKLTKNGKALYSGMLNHEGGVVDDLIVYLMEWGYR 109 Query: 59 -------KIEEDTFILEIDRSKRDSLIDK--LLFYKLR--------SNVIIEIQPINGVV 101 + ++ +++E + +L ++ L ++ + ++ E+ ++ + Sbjct: 110 VVVNCATREKDLAWMVEHAKGFEVALNERDDLAMIAVQGPAAREKTAQILPELLTMDLDI 169 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148 + +F R R + LR Sbjct: 170 FQGADVAALGDVTFFVARTGYTGEDGYEIMLPTSDADAFWRALMAVGVAPCGLGARDTLR 229 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ + +T P A M + +IG+E +S + + K ++ Sbjct: 230 LEAGMNLYGHEMDDNTS-PLVANMAWTIAWQPEERNFIGREAISAEKAAGVTHKLVGLVL 288 Query: 209 GTDDLPPSGSPILTDDIEI-GTLGVVVGKKAL----AIARI 244 + + + + +E G + L A+AR+ Sbjct: 289 QDRGVLRAEQVVTCEGVEGEGVITSGTFSPTLSKSVALARV 329 >gi|239982431|ref|ZP_04704955.1| glycine cleavage system aminomethyltransferase T [Streptomyces albus J1074] gi|291454277|ref|ZP_06593667.1| glycine cleavage system aminomethyltransferase T [Streptomyces albus J1074] gi|291357226|gb|EFE84128.1| glycine cleavage system aminomethyltransferase T [Streptomyces albus J1074] Length = 374 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 57/298 (19%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---IE 61 LS+ I V G A FL A++ + T+ AR + I G IL ++ + +E Sbjct: 52 LSHMGEITVLGPDATRFLAYALVGN-IATIGPGRARYTMICQEDGGILDDLIVYRRGPVE 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120 F++ + ++D L +V + + + ++ +S D Sbjct: 111 SPEFMVVANAGNAQVVLDALTGRAASFDVEVRDDRDAYALIAVQGPASPAILASVTDADL 170 Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 + + L+ RT E + + Sbjct: 171 DGLKYYAGLPGTVAGVEALIARTGYTGEDGFELFVAPGDAVALWEALTAAGAGAGLVPCG 230 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199 LR+ G+ + + + P DA + + + K G ++G+ + + Sbjct: 231 LSCRDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALEKAAADAA 287 Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250 R ++ +P +G P++ D IG + L A+A +D A Sbjct: 288 EQPPRTLVGLVAEGRRVPRAGYPVVMDGQVIGEVTSGAPSPTLGKPVAMAYVDAAHAA 345 >gi|94312411|ref|YP_585621.1| glycine cleavage system aminomethyltransferase T [Cupriavidus metallidurans CH34] gi|229807553|sp|Q1LHM4|GCST_RALME RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|93356263|gb|ABF10352.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Cupriavidus metallidurans CH34] Length = 375 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A FL+ ++ ++ L A S +L +G ++ ++ ED F Sbjct: 51 SHMCVVDLSGIHARAFLRGLLANNIDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110 Query: 66 ILEIDRSKR 74 L ++ S Sbjct: 111 RLVVNASTA 119 >gi|156932641|ref|YP_001436557.1| glycine cleavage system aminomethyltransferase T [Cronobacter sakazakii ATCC BAA-894] gi|166221548|sp|A7MR82|GCST_ENTS8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|156530895|gb|ABU75721.1| hypothetical protein ESA_00424 [Cronobacter sakazakii ATCC BAA-894] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFMTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + V + ++ ++ ++ Sbjct: 110 RLVVNSATREKDLAWINEHAEPYGVSVTVRDDLSLIAVQGPNAKAKAATL 159 >gi|104784214|ref|YP_610712.1| glycine cleavage system aminomethyltransferase T [Pseudomonas entomophila L48] gi|95113201|emb|CAK17929.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Pseudomonas entomophila L48] Length = 360 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 13/174 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G +A P+LQ ++ DV L A S +L +G ++ + + E + Sbjct: 50 SHMTVIDIEGCAATPWLQHLLANDVTRLESPGKALYSPLLNHEGGVIDDLIAYRTEA-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L + + RD +++ L + + V +P ++ + ++ + S Sbjct: 109 RLVANAATRDKVLNWL--HAQSAGFKVSFTARPELAILAIQGPQAREKVAALV----SAP 162 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177 L R E A + R + D LP P DL+ Sbjct: 163 RAALIRELRPFEGFAE--GDWFIARTGYTGEDGLEIILPGEQAPAFFN-DLVGA 213 >gi|22127170|ref|NP_670593.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis KIM 10] gi|45443338|ref|NP_994877.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis biovar Microtus str. 91001] gi|108806357|ref|YP_650273.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis Antiqua] gi|108813266|ref|YP_649033.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis Nepal516] gi|145597914|ref|YP_001161990.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis Pestoides F] gi|150260082|ref|ZP_01916810.1| aminomethyltransferase [Yersinia pestis CA88-4125] gi|162421265|ref|YP_001608139.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis Angola] gi|165924972|ref|ZP_02220804.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937207|ref|ZP_02225771.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010334|ref|ZP_02231232.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212706|ref|ZP_02238741.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399824|ref|ZP_02305342.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419345|ref|ZP_02311098.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425299|ref|ZP_02317052.1| glycine cleavage system T protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467675|ref|ZP_02332379.1| glycine cleavage system T protein [Yersinia pestis FV-1] gi|186896613|ref|YP_001873725.1| glycine cleavage system aminomethyltransferase T [Yersinia pseudotuberculosis PB1/+] gi|218928080|ref|YP_002345955.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis CO92] gi|229837595|ref|ZP_04457757.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis Pestoides A] gi|229840819|ref|ZP_04460978.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842622|ref|ZP_04462777.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis biovar Orientalis str. India 195] gi|229903723|ref|ZP_04518836.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis Nepal516] gi|294502927|ref|YP_003566989.1| aminomethyltransferase [Yersinia pestis Z176003] gi|24636861|sp|Q8ZHI6|GCST_YERPE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122383780|sp|Q1CB44|GCST_YERPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|122384267|sp|Q1CEZ7|GCST_YERPN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221579|sp|A4TIA5|GCST_YERPP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238687304|sp|A9R4K6|GCST_YERPG RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238691349|sp|B2K0Q5|GCST_YERPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|21960233|gb|AAM86844.1|AE013930_5 aminomethyltransferase of glycine cleavage system [Yersinia pestis KIM 10] gi|45438207|gb|AAS63754.1| aminomethyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|108776914|gb|ABG19433.1| aminomethyltransferase [Yersinia pestis Nepal516] gi|108778270|gb|ABG12328.1| aminomethyltransferase [Yersinia pestis Antiqua] gi|115346691|emb|CAL19574.1| aminomethyltransferase [Yersinia pestis CO92] gi|145209610|gb|ABP39017.1| aminomethyltransferase [Yersinia pestis Pestoides F] gi|149289490|gb|EDM39567.1| aminomethyltransferase [Yersinia pestis CA88-4125] gi|162354080|gb|ABX88028.1| glycine cleavage system T protein [Yersinia pestis Angola] gi|165914681|gb|EDR33294.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923172|gb|EDR40323.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990820|gb|EDR43121.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205998|gb|EDR50478.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166963339|gb|EDR59360.1| glycine cleavage system T protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050532|gb|EDR61940.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055699|gb|EDR65483.1| glycine cleavage system T protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699639|gb|ACC90268.1| glycine cleavage system T protein [Yersinia pseudotuberculosis PB1/+] gi|229679493|gb|EEO75596.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis Nepal516] gi|229690932|gb|EEO82986.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis biovar Orientalis str. India 195] gi|229697185|gb|EEO87232.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704283|gb|EEO91294.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Yersinia pestis Pestoides A] gi|262360962|gb|ACY57683.1| aminomethyltransferase [Yersinia pestis D106004] gi|262364902|gb|ACY61459.1| aminomethyltransferase [Yersinia pestis D182038] gi|294353386|gb|ADE63727.1| aminomethyltransferase [Yersinia pestis Z176003] gi|320014014|gb|ADV97585.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ ++ + Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152 >gi|302385924|ref|YP_003821746.1| glycine cleavage system T protein [Clostridium saccharolyticum WM1] gi|302196552|gb|ADL04123.1| glycine cleavage system T protein [Clostridium saccharolyticum WM1] Length = 360 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 95/308 (30%), Gaps = 54/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G A+ LQ ++T D + AR S + G + ++ K + + + Sbjct: 51 SHMGEIICKGTDALENLQRMLTNDFTGMADGQARYSPMCNEMGGTVDDLIVYKKKAEEYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 + ++ S ++ +L +K V+ E + ++ + Sbjct: 111 IVVNASNKEKDYRWMLDHK-FGEVVFEDISDDITQIALQGPKSQEILRKLTGDIPEKYYY 169 Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146 + I R + N E + K Y Sbjct: 170 GNFNGRVAQIPCIVSRTGYTGEDGFELYLDNTYAETMWETLMEAGKEYGLIPCGLGARDT 229 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ + I P + + + + K +IG+ + +++RKR + Sbjct: 230 LRLEAGMPLYGHEM-NDEINPVETGLGF--AVKMKKEDFIGKSHLP--DKDSLLRKRVGL 284 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260 + +L + + G A+AI + K + + V Sbjct: 285 KVTGRGIIREQEEVLVNGKKAGFTTSGTHCPYLGYPAAMAILDKEYAIEGTK--VTVIVR 342 Query: 261 GVRVKASF 268 G V+A Sbjct: 343 GRDVEAEV 350 >gi|300789372|ref|YP_003769663.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32] gi|299798886|gb|ADJ49261.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32] Length = 808 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 87/265 (32%), Gaps = 48/265 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 +++ G ++ FLQ++ T + + +L G + ++++E + F Sbjct: 498 VEISGPGSLAFLQSLTTNQLDK-SVGSVTYTLMLDSAGGVRSDVTVARLEPEVFQVGING 556 Query: 67 -LEID-----------------------------RSKRDSL----IDK--LLFYKLRSNV 90 +++D R L L +++ R Sbjct: 557 NIDVDHFVKHAPSGVRVRDITGGTCCVGVWGPLARDLVQPLSHEDFSHQGLKYFRAR-KA 615 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I P+ + LS+ E + + D + D L +A+ ++ LR+ Sbjct: 616 RIAGVPVVAMRLSYVGELGWEIYTSADNGLRLWDAL-WAAGQPLGVVAAGRAAFNSLRLE 674 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMIITG 209 G TD P++A + + KG ++G++ + R + R R + I Sbjct: 675 KGYRLWGTDMTTEHD-PYEAGLAF--AVRPAKGDFLGRDAIEGRSEETASRRLRCLTIDD 731 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234 + P+ + G + Sbjct: 732 GRTVVLGKEPVFAGGVASGYVTSAA 756 >gi|195117468|ref|XP_002003269.1| GI23443 [Drosophila mojavensis] gi|193913844|gb|EDW12711.1| GI23443 [Drosophila mojavensis] Length = 410 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 55/273 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A L+++ TAD+L +P + QG IL +++K+ E + + + Sbjct: 87 VRGKDAAACLESVCTADILEMPGGSGSLTVFTNEQGGILDDLIVNKVSEQELYVVSNAAM 146 Query: 73 -----------------------------------------KRDSLIDKL-------LFY 84 L L Y Sbjct: 147 KQQDQEIMSSAVSRFKSQGKDVSIEFLSPADQSLIAVQGPQVAQQLAKLLPQPKALEQLY 206 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 +RS V E+ I V ++ +T + I + + + L E + + Sbjct: 207 FMRSGV-FELAGIRNVRIT-RCGYTGEDGVEISVQSAQVEALTEALLAAGELRLAGLGAR 264 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR+ G+ D + I P +A + L + G + + + + R+R Sbjct: 265 DSLRLEAGLCLYGNDI-DAQITPVEAALAWLVAKRRRTTADFPGAQPILQQLKEGVQRRR 323 Query: 204 PMIITGTDDLPP--SGSPILTDDIEIGTLGVVV 234 + +PP +G I + ++G + Sbjct: 324 IGLQMLGAKVPPARAGVAIFSGGQQVGRVTSGC 356 >gi|270487506|ref|ZP_06204580.1| aminomethyltransferase [Yersinia pestis KIM D27] gi|270336010|gb|EFA46787.1| aminomethyltransferase [Yersinia pestis KIM D27] Length = 310 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ ++ + Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152 >gi|149201966|ref|ZP_01878940.1| aminomethyltransferase [Roseovarius sp. TM1035] gi|149145014|gb|EDM33043.1| aminomethyltransferase [Roseovarius sp. TM1035] Length = 390 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 80/279 (28%), Gaps = 54/279 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69 ++ G A L ++T DV +P + +G ++ + + + + L Sbjct: 67 RITGPDAARVLNRLVTRDVTKIPLHRVGYAIWCDEEGMVIDDGTLFHLGAEDWRLCCQEP 126 Query: 70 ------------DRSKRDSLID----KL---LFYKLRSNVIIEI-----QPINGVVLSWN 105 D D L Y + +++ + GV Sbjct: 127 MLRWLLDAAWGFDVDILDESRKIAGLALQGPTAYAVLRAAGLDLGHLRPFDLAGVEPGLM 186 Query: 106 QEHTFSNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHE---LRINHGIVDPNTD 159 T E ++ L R W E + Y RI G + D Sbjct: 187 ISRTGFTGDLGYELWTAWGDALPLWDRLWQAGEDLGLRAIGYEAVNIARIEAGFMVAGVD 246 Query: 160 FLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 F P+ P + + + + LTKG + G+ R R M + Sbjct: 247 FQPAHATERLHRGHTPIELGLGPM--VDLTKGHFNGR----RALLAAKPRSLLMRLDVEG 300 Query: 212 DLPPSGSPILTDD-IEIGTLGVVV------GKKALAIAR 243 P G+ + E+G + V ALA R Sbjct: 301 FKPAQGALVYHAKRREVGHVTSGVWSPTAKRNIALAHVR 339 >gi|311747757|ref|ZP_07721542.1| glycine cleavage system T protein [Algoriphagus sp. PR1] gi|126575746|gb|EAZ80056.1| glycine cleavage system T protein [Algoriphagus sp. PR1] Length = 364 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 92/310 (29%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ +Q + + D L A+ S G I+ ++ K ++ ++ Sbjct: 53 SHMGEFMVEGPEALNLIQKVTSNDASKLVEGQAQYSCFPNETGGIVDDLIVYKFSDEKYM 112 Query: 67 LEIDRSKRDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEH 108 L ++ S + + + Y L + I +Q + V LS + + Sbjct: 113 LVVNASNIEKDWNWVNKYNTMGAQLTNISDDISLFAVQGPKAIEAVQALTPVNLSEVKFY 172 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---Y--------------------H 145 F+ F + I + G E + + Sbjct: 173 HFTLGEFAGVKDVIISGTGYTGAGGFEIYVKNEDAEQVWKAIFEAGKDFDIKPIGLGARD 232 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK + E + + I R+ Sbjct: 233 TLRMEMGYCLYGNDI-DDTTSPLEAGLGWI--TKFTKD-FTNSEALLAQKEAGITRRLVG 288 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258 I +P I+ + EIG + L + + + + + Sbjct: 289 FIMQDRGIPRGHYKIVDAEGNEIGEVTSGTQSPSMNVGIGLGYVKKEFAKAGTEIFIQVR 348 Query: 259 VHGVRVKASF 268 ++ Sbjct: 349 NKNLKAIVEK 358 >gi|37927479|pdb|1PJ5|A Chain A, Crystal Structure Of Dimethylglycine Oxidase Of Arthrobacter Globiformis In Complex With Acetate gi|37927481|pdb|1PJ6|A Chain A, Crystal Structure Of Dimethylglycine Oxidase Of Arthrobacter Globiformis In Complex With Folic Acid gi|37927484|pdb|1PJ7|A Chain A, Structure Of Dimethylglycine Oxidase Of Arthrobacter Globiformis In Complex With Folinic Acid gi|13241956|gb|AAK16482.1|AF329477_2 N,N-dimethylglycine oxidase [Arthrobacter globiformis] Length = 830 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 53/278 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ LQ + TAD+ + +L G + ++++ EDTF L + Sbjct: 511 LEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSDITVARLSEDTFQLGANG 569 Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100 + + ++ + ++R S V + +G+ Sbjct: 570 NIDTAYFERAARHQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGL 629 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 + R S L + + IA+ Sbjct: 630 KYFRAKNVVIGGIPVTAMRLSYVGELGWELYTSADNGQRLWDALWQAGQPFGVIAAGRAA 689 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202 + LR+ G TD P +A + + + K +IG+ + R + + R Sbjct: 690 FSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKESFIGKGALEGRTEEASARRL 746 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 R + I + P+ + +G + +A Sbjct: 747 RCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVA 784 >gi|51597492|ref|YP_071683.1| glycine cleavage system aminomethyltransferase T [Yersinia pseudotuberculosis IP 32953] gi|153950642|ref|YP_001399847.1| glycine cleavage system aminomethyltransferase T [Yersinia pseudotuberculosis IP 31758] gi|59797702|sp|Q666R5|GCST_YERPS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166989732|sp|A7FF19|GCST_YERP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|51590774|emb|CAH22420.1| Glycine cleavage system T-protein [Yersinia pseudotuberculosis IP 32953] gi|152962137|gb|ABS49598.1| glycine cleavage system T protein [Yersinia pseudotuberculosis IP 31758] Length = 365 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + RD + + + V + ++ ++ + Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152 >gi|260171346|ref|ZP_05757758.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. D2] gi|315919657|ref|ZP_07915897.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693532|gb|EFS30367.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 361 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ I + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEDGGIVDDLLVYRYEPEKYMLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 ME 117 >gi|124516327|gb|EAY57835.1| Glycine cleavage system T protein [Leptospirillum rubarum] Length = 374 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 95/314 (30%), Gaps = 64/314 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ + +IT+++ +P A +L P G ++ + + Sbjct: 48 SHMGHFVLRGKDALGAVNRLITSNLENVPPGKALYGHLLNPAGGVIDDIMAYHFGRERVD 107 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107 L ++ S RD + + L + + +E V ++ Sbjct: 108 LVVNASNRDGDARWIREH-LPAGIELEDFSPGHVGMAVQGPRASRVLEDVLPGILDMRRR 166 Query: 108 -----HTFSNSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY 144 F+ R +G + Sbjct: 167 ETRLLQIEGGEGFLVSRTGYTGEDGWEFFGPAGPGVSFYEKLLHAGKKAGILACCGLGAR 226 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G + P DA + +S TK +IG+ S ++ R P Sbjct: 227 DLLRLEMGYPLYGQEL-NDRFSPFDAGLAF--AVSRTKSEFIGR--TSILESDGQPRTNP 281 Query: 205 -------MIITGTDDLPPSGSPI-LTDDIEIGTLGV------VVGKKALAIARIDKVDHA 250 ++ G +P +G P+ TD +G + V LA D ++ Sbjct: 282 GHPSLGGFVVEGRG-IPRTGCPMEKTDGTRVGEVTSGGFSPRVGSGFGLAYLDRDFLEFF 340 Query: 251 IKKGM-ALTVHGVR 263 G + +HG+ Sbjct: 341 RNGGPGQVRIHGIA 354 >gi|30248621|ref|NP_840691.1| glycine cleavage system aminomethyltransferase T [Nitrosomonas europaea ATCC 19718] gi|34921593|sp|Q82WQ6|GCST_NITEU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|30180216|emb|CAD84518.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas europaea ATCC 19718] Length = 363 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G++ FL+ ++ +V L A + +LTP G I+ +I + E F L ++ Sbjct: 55 VDIHGENVRQFLRGLVANNVDKLTLPGKALYTCMLTPTGGIIDDLIIYFLSESWFRLVVN 114 Query: 71 RSKRDSLIDKLL 82 D ID + Sbjct: 115 AGTADKDIDWIT 126 >gi|329955526|ref|ZP_08296434.1| aminomethyltransferase [Bacteroides clarus YIT 12056] gi|328525929|gb|EGF52953.1| aminomethyltransferase [Bacteroides clarus YIT 12056] Length = 363 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G A+ FLQ + + +V L + + G I+ L+ + E++ ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEQEKYLLVVNASN 115 Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ D++ ++ + +Q + V LS +TF++ F Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAVEALQKLTPVNLSELPYYTFTHGEF 175 Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152 E I + G E + +K ++ LR+ G Sbjct: 176 AGEPDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGAEFSIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + + K + + ++ + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRPMLEKQKAEGTARKLVGFEMVDRG 293 Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G + + + IG + + + + + + + ++ Sbjct: 294 IPRHGYELQSPEGAPIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVRPP 358 >gi|315443872|ref|YP_004076751.1| aminomethyltransferase [Mycobacterium sp. Spyr1] gi|315262175|gb|ADT98916.1| aminomethyltransferase [Mycobacterium sp. Spyr1] Length = 365 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 93/308 (30%), Gaps = 46/308 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + T D+ + A+ + T G ++ + + +D Sbjct: 53 SHLGKALVTGPGAAEFVNSAFTNDLRRIGPGKAQYTLCCTEDGGVIDDLIAYYVSDDEIF 112 Query: 67 LE----IDRSKRDSLIDKL-----LFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + +L D+ + + RS ++ +Q VV F Sbjct: 113 LVPNAANTAAVVAALQDRAPDGITITDEHRSRAVLAVQGPRSADVVGGLGLPTDMDYMGF 172 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------RINHGIVDP---NTDFL 161 D + + RT E + + + R G Sbjct: 173 ADGEVGGVETRVCRTGYTGEHGYELLPAWDQAEVVFDALVESVRAAGGEPAGLGARDTLR 232 Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 +P H+ +D+ I K + G++ + + R+ + Sbjct: 233 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFWGRDALLAEKEAG-PRRTLRGLRAVG 291 Query: 212 -DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GV 262 + + +LTDD +G K +A+A ID I G +TV V Sbjct: 292 RGVLRADLSVLTDDTPVGFTTSGTFSPTLKVGIALALIDTAAG-IADGDHVTVDVRGRRV 350 Query: 263 RVKASFPH 270 + P Sbjct: 351 ECEVVKPP 358 >gi|304396726|ref|ZP_07378606.1| glycine cleavage system T protein [Pantoea sp. aB] gi|304355522|gb|EFM19889.1| glycine cleavage system T protein [Pantoea sp. aB] Length = 365 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F Sbjct: 50 SHMTIVDLTGPRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMSESFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119 L ++ + R++ + + + + + E + + + Q + + F +E+ Sbjct: 110 RLVVNSATRENDLAWITQHAQGYGITLMERDDLALIAVQGPQAQQKAQTLFSEEQRQAVA 169 Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + LR+ Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPAGEAADFWQRLLAAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + P A M + +IG+E + + R + Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMSWTVCWEPSDRDFIGREALELQRERGTEKLVGLILTE 288 Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + TDD I+T TLG +A+AR+ + + Sbjct: 289 KGVLRNGQPVRFTDDQGQPQEGIITSGSFSPTLGCS-----IALARV-PASVGSTAIVEI 342 Query: 258 TVHGVRVKASFP 269 + V+ + P Sbjct: 343 RNRQMPVQVTRP 354 >gi|124809754|ref|XP_001348671.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7] gi|23497569|gb|AAN37110.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7] Length = 524 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 44/128 (34%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT------------LPYK------------- 37 L N++ I++ GK + FLQ++ T D+ LP Sbjct: 6 LCKLKNRALIQLWGKDSFKFLQSLTTNDLNKIIPESDFILHKNLPENILCNNYDSYIYDI 65 Query: 38 -----------IARGSAILTPQGKILLYFLISKI----EED----TFILEIDRSKRDSLI 78 + S L GKIL I I E++ F ++ + + L+ Sbjct: 66 NNKTTNYEKSAVGLPSLFLLNNGKILYDCFIYNIKYSYEKNLFFSLFYIDCNIHILNFLL 125 Query: 79 DKLLFYKL 86 D L KL Sbjct: 126 DLLEKRKL 133 Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 F + P D D LN ++ KGCY+GQE ++R ++ I K + + Sbjct: 337 FTFKNLTPFDLNYDNLNYLTKEKGCYVGQEAINRTRNEIFISKYSLTL 384 >gi|149912870|ref|ZP_01901404.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] gi|149813276|gb|EDM73102.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] Length = 417 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 97/304 (31%), Gaps = 54/304 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F+Q + D+ + + I +G IL ++ +++E+ F L + Sbjct: 94 VEITGPDAAKFVQMLTPRDLSNMAVGQCKYVLITNAEGGILNDPILLRLDENHFWLSLAD 153 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------GVVLSWNQE 107 S ++ + S + + I + + W +E Sbjct: 154 S---DILLWAQGVAVHSGLDVSICEPDVSPLQLQGPKSGEIMRALFGDEIMDLRYYWLRE 210 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151 I R + L + + + + T RI Sbjct: 211 MDLDGIPLIVSRTGWSSELGYEIYLRDGTKGDALWERIMAAGMPFGLKPGHTSSIRRIEG 270 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ + D T P + +D L + + +IG+ + RI+ + RK+ ++ Sbjct: 271 GMLSYHADADIHT-NPFELGLDRLVNLDMEAD-FIGKFALQRIRDNGVTRKQIGLVIDGP 328 Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262 L + PI D +G + + ALA+ +D + + + Sbjct: 329 KLTGPNTTFWPINHDGACVGRVTSAIYSPRLGKNIALAMVSVDCAELGTELEVVTHSGET 388 Query: 263 RVKA 266 Sbjct: 389 TATV 392 >gi|222081899|ref|YP_002541264.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] gi|221726578|gb|ACM29667.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] Length = 789 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 93/298 (31%), Gaps = 62/298 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516 Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96 F + + ++ L K R II P Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139 + + + F + + R L + + H + + Sbjct: 575 QPTIGELEWFRFAVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDAVWKAGEP 634 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +RI G++ + +F T P +A + + + +IG+E + R Sbjct: 635 YGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693 Query: 194 IQHRNIIRKRPMII--TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 R + MI ++ G I ++G + + +A+ARID Sbjct: 694 ---RKENPRHLMIGLDVQANETVGHGDCIHIGRAQVGVITSATRSPILGQTIALARID 748 >gi|145223526|ref|YP_001134204.1| glycine cleavage system aminomethyltransferase T [Mycobacterium gilvum PYR-GCK] gi|145216012|gb|ABP45416.1| aminomethyltransferase [Mycobacterium gilvum PYR-GCK] Length = 369 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 93/308 (30%), Gaps = 46/308 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + T D+ + A+ + T G ++ + + +D Sbjct: 57 SHLGKALVTGPGAAEFVNSAFTNDLRRIGPGKAQYTLCCTEDGGVIDDLIAYYVSDDEIF 116 Query: 67 LE----IDRSKRDSLIDKL-----LFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + +L D+ + + RS ++ +Q VV F Sbjct: 117 LVPNAANTAAVVAALQDRAPDGITITDEHRSRAVLAVQGPRSADVVGGLGLPTDMDYMGF 176 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------RINHGIVDP---NTDFL 161 D + + RT E + + + R G Sbjct: 177 ADGEVGGVETRVCRTGYTGEHGYELLPAWDQAEVVFDALVESVRAAGGEPAGLGARDTLR 236 Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 +P H+ +D+ I K + G++ + + R+ + Sbjct: 237 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFWGRDALLAEKEAG-PRRTLRGLRAVG 295 Query: 212 -DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GV 262 + + +LTDD +G K +A+A ID I G +TV V Sbjct: 296 RGVLRADLSVLTDDTPVGFTTSGTFSPTLKVGIALALIDTAAG-IADGDHVTVDVRGRRV 354 Query: 263 RVKASFPH 270 + P Sbjct: 355 ECEVVKPP 362 >gi|324503440|gb|ADY41498.1| Pyruvate dehydrogenase phosphatase regulatory subunit [Ascaris suum] Length = 867 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 90/289 (31%), Gaps = 56/289 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +S+ + +V G A+ +Q + +ADV P + + G + +S++ Sbjct: 524 LIDMSSFAKFEVTGPDAVKHMQRLCSADVDK-PVGTTIYTGMQNEAGGYVTDCTVSRVGP 582 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------QEHT 109 + + ++ + L+ + Q + G+ + + Sbjct: 583 QHYFVVAPTVQQLRFQHWFYRWALKWQHNVTSQDVTGLYTAVDVVGPASRYLMQDLTGRP 642 Query: 110 FSNSSFIDERF----------------SIADVLLHRTWGHNEKIASDIK----------- 142 S+S+F RF S L + NE + + Sbjct: 643 ISSSNFPSFRFKELSIGIATGIRAISVSHCGELGWVLYIPNEVAQNVYELIVDAGHEYGL 702 Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +LRI V D +T+ P++ +S K ++G+E + + Sbjct: 703 MHAGYYALRQLRIEKFYVYWQQDI-NATVTPNECGRSFR--VSFEKD-FLGKEALVKQNE 758 Query: 197 RNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 I ++ ++ TD P G I + +G L Sbjct: 759 TGISKRFVQLLVDRHDMETDPWPQGGEVIYRNGRPVGRTTSAAYGFTLG 807 >gi|227355072|ref|ZP_03839483.1| aminomethyltransferase [Proteus mirabilis ATCC 29906] gi|227164859|gb|EEI49706.1| aminomethyltransferase [Proteus mirabilis ATCC 29906] Length = 382 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 31/64 (48%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ +K+ G+ A L +I+AD+ ++ + + +L +GKI+ + E Sbjct: 43 TDFSHYGMVKISGEDAWRLLNYLISADISSIRDEQLLYTLLLDKEGKIISDAYVLCDNEH 102 Query: 64 TFIL 67 F++ Sbjct: 103 YFLI 106 >gi|116672244|ref|YP_833177.1| sarcosine oxidase subunit alpha family protein [Arthrobacter sp. FB24] gi|116612353|gb|ABK05077.1| sarcosine oxidase, alpha subunit family [Arthrobacter sp. FB24] Length = 984 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 87/281 (30%), Gaps = 62/281 (22%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I++ GK A FL I T L AR + G I + ++ Sbjct: 640 MDATTL---GKIEIRGKDAGEFLNRIYTNAFKKLAPGSARYGVMCMADGMIFDDGVTLRL 696 Query: 61 EEDTFILEIDRSKRDSLIDKL------------------------------LFYKLRSNV 90 +ED F + ++D L + + V Sbjct: 697 DEDRFFMTTTTGGAAKVLDWLEEWLQTEWPELDVHCTSVTEQWSTIAVVGPKSRAVLAKV 756 Query: 91 IIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134 E+ G+ ++ + S R S + L + TW Sbjct: 757 APELAAGGGLEAEAFPFMTFRETTLASGVQARICRISFSGELAYEINVPSWYGLNTWEAV 816 Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 ++ +T H LR G D T+ P DA M+ + +S K +IG Sbjct: 817 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWV--VSKAKE-FIG 872 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226 + +R + RK + + D P G+ ++ I Sbjct: 873 KRSYARADAKREDRKHLVSVLPVDGTLRLPEGTQLVEKGIP 913 >gi|320449768|ref|YP_004201864.1| glycine cleavage system T protein [Thermus scotoductus SA-01] gi|320149937|gb|ADW21315.1| glycine cleavage system T protein [Thermus scotoductus SA-01] Length = 349 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 83/282 (29%), Gaps = 51/282 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ A+ FLQ D L A+ S + +G ++ + ++ E+ ++ Sbjct: 49 SHMGEFLIRGREALAFLQWATANDAAKLKVGRAQYSMLPNARGGVVDDIYLYRLAEEEYL 108 Query: 67 LEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111 + ++ + L + + V + +L+ S Sbjct: 109 MVVNAANIAKDFAHLKELSRGFA-VELTDLSEETALLALQGPKAASLLQGLTDADLSQRK 167 Query: 112 NSSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELR 148 + R + L RT + + LR Sbjct: 168 KNDVFSARVAGRPARLARTGYTGEDGFELFLAPKDAEAVFEALLEAGATPAGLGARDTLR 227 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G + P + + K + G+E + ++ + + Sbjct: 228 LEAGFPLYGHELT-DDTNPLCTPWAWV--VKKEKD-FHGKEAMLAT----PCAEKLIGLV 279 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDK 246 +P G + + D +G + K +A+A ++K Sbjct: 280 LEAGIPREGYRVYSGDRPVGRVTSGGYSPLLEKGIALAYVEK 321 >gi|197286738|ref|YP_002152610.1| aminomethyltransferase [Proteus mirabilis HI4320] gi|194684225|emb|CAR45729.1| putative aminomethyltransferase [Proteus mirabilis HI4320] Length = 382 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ +K+ G+ A L +I+AD+ ++ + + +L GKI+ + E Sbjct: 43 TDFSHYGMVKISGEDAWRLLNYLISADISSIRDEQLLYTLLLDKAGKIISDAYVLCDNEH 102 Query: 64 TFIL 67 F++ Sbjct: 103 YFLI 106 >gi|269468387|gb|EEZ80052.1| Glycine cleavage T protein, aminomethyltransferase [uncultured SUP05 cluster bacterium] Length = 358 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 39/232 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A FLQ +I DV L A S +L +G ++ ++ + ++ + Sbjct: 49 SHMTVVDFKGLQAKVFLQTLIANDVDKLKTEGKALYSCMLNEKGGVVDDLIVYYLNDEDY 108 Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNVIIEIQP-INGVVL 102 + I+ + I L + R+ V E P + V Sbjct: 109 RMVINAGTTEKDIAWINTQAEGFDVSVEPKFDLAMIAVQGPNARAKV-FEAMPGVEDVCG 167 Query: 103 SWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRI 149 + S S R + + LR+ Sbjct: 168 ELKPFNAASLGSLFIARTGYTGEDGFEIMLPEKSAEFTWKMLLEVGVKPCGLGARDTLRL 227 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 G+ ++ + P +A + +S ++G++ + ++ + + + Sbjct: 228 EAGMSLYGSEM-NDQVSPLEAALTWTVDLSDEDRHFVGRDALEALRDKGVKK 278 >gi|283788439|ref|YP_003368304.1| aminomethyltransferase (glycine cleavage system protein) [Citrobacter rodentium ICC168] gi|282951893|emb|CBG91610.1| aminomethyltransferase (glycine cleavage system protein) [Citrobacter rodentium ICC168] Length = 364 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 16/193 (8%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTRTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + + I ++ ++ + + F DE+ + Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIEITVRDDLSLIAVQGPNAQAKAATLFTDEQRQAVE 169 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI--SLTK 182 + + Y + P++ D + + + K Sbjct: 170 GMKPFFGVQAGDLFIATTGYT------------GEAGYEIAMPNEKAADFWHALVEAGVK 217 Query: 183 GCYIGQEVVSRIQ 195 C +G R++ Sbjct: 218 PCGLGARDTLRLE 230 >gi|34498886|ref|NP_903101.1| glycine cleavage system aminomethyltransferase T [Chromobacterium violaceum ATCC 12472] gi|59797838|sp|Q7NSJ3|GCST_CHRVO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|34104737|gb|AAQ61094.1| glycine cleavage system T protein [Chromobacterium violaceum ATCC 12472] Length = 362 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS 58 S+ + I + G A +LQ +I DV L A S +LTP+G ++ ++ Sbjct: 52 SHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLTPEGTVVDDLIVY 104 >gi|320160891|ref|YP_004174115.1| serine hydroxymethyltransferase / aminomethyltransferase [Anaerolinea thermophila UNI-1] gi|319994744|dbj|BAJ63515.1| serine hydroxymethyltransferase / aminomethyltransferase [Anaerolinea thermophila UNI-1] Length = 1054 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A FL ++ D+ L + + L P+ ++ L+ + E+ ++ Sbjct: 695 SHMGVYQVEGPQACAFLDSVCGNDIAALEVGESCYTHFLDPEANVIDDTLVYRRGEEKYL 754 Query: 67 LEIDRS 72 + ++ S Sbjct: 755 VVVNAS 760 >gi|161612168|gb|AAI55631.1| Dmgdh protein [Danio rerio] Length = 875 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 95/278 (34%), Gaps = 52/278 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +KV G + L ++ + + S +LTP+G++ ++ + Sbjct: 543 IDLSPFGKMKVTGADSERLLDRLLANTLPKV--GQTNISHMLTPRGRVYAELTVTHTQPG 600 Query: 64 TFILE------------IDRSKRD--------SLIDKLLFY-----KLRS---NVIIEIQ 95 F+L I+R D ++ D++ K R+ + Sbjct: 601 EFLLITGSGSELHDLRWIEREAADGGYDVCVTNVTDEIGVLGIAGPKARTILQKLTSADL 660 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---------------GHNEKIASD 140 +G + + ++ R S L + ++ D Sbjct: 661 SESGFRFLQCRTIELAGATVQAIRISYTGELGWELYMDMRNMSAVYQALMEAGRDENIDD 720 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ G + T P +A +D I L K +IG++ + I+ + Sbjct: 721 FGTYAMNSLRLEKGFRAWGAEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQALLEIKAQ 777 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234 + R+ + TDD+ P G+ + + +G Sbjct: 778 GLSRRLAFLTLNTDDIDPEGNESVWHNGEVVGNTTSGS 815 >gi|18977713|ref|NP_579070.1| glycine cleavage system aminomethyltransferase T [Pyrococcus furiosus DSM 3638] gi|24636855|sp|Q8U185|GCST_PYRFU RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|18893448|gb|AAL81465.1| aminomethyltransferase [Pyrococcus furiosus DSM 3638] Length = 398 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ FLQ T D+ P + +L +G I L+ + + ++ Sbjct: 50 SHMGEILFKGKDALKFLQYTTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 109 Query: 67 LEIDRSKRDSL---IDKLLF-YKLRSNVIIEIQ 95 + D + L L + + + +EI+ Sbjct: 110 MICDADAFEKLYAWFTYLKKTIEQFTKLDLEIE 142 >gi|37527466|ref|NP_930810.1| glycine cleavage system aminomethyltransferase T [Photorhabdus luminescens subsp. laumondii TTO1] gi|59797833|sp|Q7N197|GCST_PHOLL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|36786901|emb|CAE15971.1| aminomethyltransferase (glycine cleavage system T protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 364 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 101/310 (32%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ D+ L A + +L G ++ ++ + D + Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYLSNDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ + R+ + + + V I+++ ++ + S +++ Sbjct: 110 RLVVNSATREKDLAWINEHVANYPVDIQVRDDLALIAVQGPDAQAKVESLLNDEQKQTIA 169 Query: 120 -------FSIADVLLHRTWGHNEK---------IASDIK--------------TYHELRI 149 D+ + T E A+D LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEVALPKEQAADFWQKLLSVGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + TI P A M +IG+E + + + ++ + + Sbjct: 230 EAGMNLYGQEM-DETISPLVANMGWTIAWKPEDRQFIGREALEKQREEGT--EQLVGLVM 286 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260 + G ++ E+GTL V +A+AR+ + + + Sbjct: 287 REKGVLRGGLAVSFTDEMGTLHSGVITSGTFSPTLGFSIALARV-PQGIGEQAVVQIRNR 345 Query: 261 GVRVKASFPH 270 + V+ P Sbjct: 346 EMPVQVVKPS 355 >gi|313202136|ref|YP_004040794.1| glycine cleavage t protein (aminomethyl transferase) [Methylovorus sp. MP688] gi|312441452|gb|ADQ85558.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. MP688] Length = 371 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 89/294 (30%), Gaps = 49/294 (16%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +KV G A + ++ D+ L + +A + G + ++ + F L Sbjct: 57 IVKVSGPDAEAVIDQLVARDITKLEPGCSLLAAEVDETGALCDDIMVIRDSATDFRLSHG 116 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------------------PINGVVLSWNQE 107 K + L K NV +E + G+ + Sbjct: 117 SGKTPEQLKLLSAGK---NVKVEPDLDVHILSLQGPLSLDILAPHLSFDLAGLPYFRHVP 173 Query: 108 HTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRIN 150 + + R + + + I + + RI Sbjct: 174 TVLFGKNIVIARGGYSGERGYEVYCTAADAVFLWDKILEVGAPFGAIPASWNSLELTRIE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISL-TKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 ++ + P + M G+ L KG YIG+ V +++ R +R +I Sbjct: 234 AALLFFPFEMPEGDTTPWEVNMGW--GVDLDKKGDYIGKAAVLKLKGRERVRH-VGLICR 290 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKK-GMALTVHG 261 + +G+ + D EIG + + L + + V + G L VH Sbjct: 291 SASAMEAGAKLFKDGKEIGVITSASYSRYLMLSLAMAHVKPELSAIGTTLEVHN 344 >gi|224113699|ref|XP_002316546.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex [Populus trichocarpa] gi|222859611|gb|EEE97158.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex [Populus trichocarpa] Length = 408 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 86/269 (31%), Gaps = 54/269 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK +PFL+ ++ ADV L + +G + +I+K+ +D + ++ Sbjct: 91 SLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNAG 150 Query: 73 ---------------------------------------KRDSLIDKLLFYKLRSNV--- 90 ++ L L S V Sbjct: 151 CRDKDLAHIEAHMKSFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDL-SKVYFG 209 Query: 91 IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 I ING + E F S + +A +L ++ G + Sbjct: 210 EFRITDINGARCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTG--LGARD 267 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D I P +A ++ G +G ++G EV+ + + R Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLNWAIGKRRKAEGGFLGAEVILKQLAEG-PKVRL 325 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + + T P S S I + IG + Sbjct: 326 VGFSSTGPPPRSHSEIQDEKGTNIGEITS 354 >gi|149202245|ref|ZP_01879218.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. TM1035] gi|149144343|gb|EDM32374.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. TM1035] Length = 1003 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 51/266 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +L R + G ++ ++++I+EDTF+ Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTNVMSSLKPGKCRYGLMCNENGFLMDDGVVARIDEDTFL 729 Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLR---SNVIIEIQP 96 +S+ + Y K R + + + Sbjct: 730 CHTTTGGAESIHGHMEDWLQCEWWDWKVYTANVTEQYAQIAVVGPKGRETLAKLTTDDLS 789 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD--IKTY 144 + + + T + R S + L W + ++ + TY Sbjct: 790 NDALPFMGWADLTLAGMPVRAYRISFSGELSYELAVPASHGRALWDALLEAGAEHSVTTY 849 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 H +R G + + T+ P D M IS K Y+G+ R + Sbjct: 850 GTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLGMGW--AISKKKDDYLGKRAQERSHMADP 906 Query: 200 IRKRPMII-TGTDDLPPSGSPILTDD 224 R + + + T + P G+ Sbjct: 907 NRWKLVGLETLDGSVLPDGAYATAPG 932 >gi|307544258|ref|YP_003896737.1| dimethyl sulfoniopropionate demethylase [Halomonas elongata DSM 2581] gi|307216282|emb|CBV41552.1| putative dimethyl sulfoniopropionate demethylase [Halomonas elongata DSM 2581] Length = 475 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 44/224 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 I+V G A F + T DV +P + R + G++L ++ ++ ED F I D Sbjct: 135 IRVKGPEAEAFCNYVCTRDVTRVPSMMGRYVVLCDEHGRVLNDPVMLRVAEDEFWFTISD 194 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------SNSSFIDE 118 + + + +R +V I+ ++ + + + + Sbjct: 195 SDLAYWF--RGVNHGMRFDVEIDEIDVSPLQVQGPKSEDLLADLVGEAVREVPYYGLMAA 252 Query: 119 RFSIADVLLHRTWGHNEK---------IASDIKTYHEL------------------RINH 151 R DV + +T EK + ++ + RI Sbjct: 253 RIEGVDVFISQTGFSGEKGYEVYAHDSTLNAETVWNAILDVGEQYNLMVIAPAHHRRIAA 312 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 GI+ D P + + + YIG+E + R + Sbjct: 313 GILSYGQDL-DHETNPFQCNLGHM-VPKAKEADYIGKEALERTR 354 >gi|227112611|ref|ZP_03826267.1| glycine cleavage system aminomethyltransferase T [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 371 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDHF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + V I + +V + Sbjct: 110 RLVVNSATREKDLAWIGQHAAPFGVEIRERDDLALVAVQGPQA 152 >gi|126741331|ref|ZP_01757008.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] gi|126717587|gb|EBA14312.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] Length = 816 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 94/314 (29%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I+V G A FL I A++ ++P + L +G I ++++ E + Sbjct: 491 MSSFGKIRVEGPDAEAFLNYICGANL-SVPTGKIVYTQFLNSRGGIEADVTVTRLSETAY 549 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102 ++ R + ++ +K NV+I ++ GV+ Sbjct: 550 LVVTPAVTRLADQTWMMRHKGDFNVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 609 Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144 QE R + L + + +T Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLFEAGQDMGLKLCGMH 669 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G D DA + + K +IG+ V + + Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKEDFIGKAAVLERKESGPKNR 726 Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIKK 253 +T + L PI+ D +G L A+ + + + + Sbjct: 727 MLQFKLTDAEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAAEILGS 786 Query: 254 GMALTVHGVRVKAS 267 + V G +VKA Sbjct: 787 TYEIDVMGTKVKAE 800 >gi|227822724|ref|YP_002826696.1| dimethylglycine dehydrogenase precursor [Sinorhizobium fredii NGR234] gi|227341725|gb|ACP25943.1| dimethylglycine dehydrogenase precursor [Sinorhizobium fredii NGR234] Length = 815 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 92/316 (29%), Gaps = 55/316 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++ G+ A +L +IT V + +G+I+ + IEED F Sbjct: 496 LPGFSRFRLKGEGARDWLSGLITGRVPK--PGRIGLAYFADDKGRIVTEMSVMAIEEDFF 553 Query: 66 ILEIDRSKRDSLIDKLLFYK----LR------------------SNVIIEIQPINGVVLS 103 L + + + LL ++ + S I+ + Sbjct: 554 FLITAATAQWHDFEWLLKHRPAGAVFTLDDVTANFACQILSGPKSRAILAEVSDADLAKG 613 Query: 104 WNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144 W T + + R S A L E A+ ++ Sbjct: 614 WLTHQTAAIAGRYCQLVRVSFAGELGWEVHTKVEDTAAVFDAVWEAGQKHGLKPFGMEAL 673 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G D +D + +K + G+ + R + + + ++ Sbjct: 674 DSLRIEKGYRAWKGDLSTDYTI-LQGGLDRF--VDWSKPGFKGKAALEREKQQGVAKRFV 730 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257 + + + P S + + +G AL + R D + + + Sbjct: 731 TLTVEAGECDAPYMSTLWSGGEVVGETTSGNWGHRVGKSIALGMLRADLAVPGREIEVEI 790 Query: 258 TVH--GVRVKASFPHW 271 V+ P W Sbjct: 791 FGDRFKATVEPDQPLW 806 >gi|222081893|ref|YP_002541258.1| aminomethyltransferase protein [Agrobacterium radiobacter K84] gi|221726572|gb|ACM29661.1| aminomethyltransferase protein [Agrobacterium radiobacter K84] Length = 377 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 55/305 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 + + G AI L +I T D+ + + +A+L +G ++ + ++++L Sbjct: 59 VHLVGPHAIAVLDSITTRDMSKIYPGRSVYAAMLNDRGYFTDDCIVYRTGPNSWMLVHGS 118 Query: 71 RSKRDSLIDKL-----------LFYKLRSN--VIIE-----IQPINGVVLSWNQEHTFSN 112 S + L+ + + L V ++ + I + + + T Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPVAVDYLAKYVPGIRDLKYFHHMQTTLFG 178 Query: 113 SSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINHGI-- 153 + + R + + + I LR+ + Sbjct: 179 APVMISRTGYTGERGYEIFVRGQDAPMVWDRIVAEGKEMGIIPCCFSVLDMLRVESYLLF 238 Query: 154 -------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + P D P + +D +S K + G E +R++ + + M+ Sbjct: 239 YPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGKERFKIFGML 295 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 I G + D ++G + + KK++AIAR+D VD A++ G L V G Sbjct: 296 IDADGP-ADLGDEVFADGKKVGVITCPCYSALTKKSMAIARLD-VDKAVQ-GTKLEVRGK 352 Query: 263 RVKAS 267 +KAS Sbjct: 353 SLKAS 357 >gi|268566597|ref|XP_002639764.1| Hypothetical protein CBG02210 [Caenorhabditis briggsae] Length = 869 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 93/278 (33%), Gaps = 56/278 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A+ +LQ + +A+V P + + +G + +S++ + F + + Sbjct: 537 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTIQ 595 Query: 74 RDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS- 111 ++ ++ + + L++ V ++ I G+ +S N TF Sbjct: 596 QERVLVWMKKWQSILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRC 655 Query: 112 -------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147 + + L + N EKI K Y +L Sbjct: 656 QEINIGMATGIRAISVTHCGELGWVIYIPNEVAQNVYEKILEAGKEYSLQHAGYYTLRQL 715 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI V D +T+ P + L + K +IG++ + R + ++ ++ Sbjct: 716 RIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVNKRFVQLL 771 Query: 208 -----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TD P G IL D +G L Sbjct: 772 VDGHDKETDPWPQGGETILKDGRPVGLTTSAAYGFTLG 809 >gi|47212973|emb|CAF93361.1| unnamed protein product [Tetraodon nigroviridis] Length = 376 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 98/308 (31%), Gaps = 54/308 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV G+ + F+++++ AD+ L + +G I+ +++K ++ + + Sbjct: 59 KVHGRDRVKFMESLVVADIAELRENQGTLTLFTNERGGIIDDLIVTKTDQGYLYVVSNAG 118 Query: 73 KRDSLIDKLL-----FYKLRS---NVIIEIQPINGVVLSWNQE----------HTFSNSS 114 D L + ++ +V +E ++ + Sbjct: 119 CADKDSAHLKVKWAWLAEFKAAGFDVDLEFLEDAALIALQGPSMSRVLQEGLKEDLGKLT 178 Query: 115 FIDER----FSIADVLLHR------------------------TWGHNEKIASDIKTYHE 146 F+ + F + D + R H+E + + Sbjct: 179 FMTSQMATVFGVPDCRITRCGYTGEDGVEISVPQSRVVEVTDKLLAHSEVKLAGLGARDS 238 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D T P +A + G + + G +VV RKR Sbjct: 239 LRLEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQSKDFPGADVVIPQIKAKTARKRVG 297 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260 +I+ T +PIL+ D IG + L A+ +D + + V Sbjct: 298 LIS-TGPPVRQHTPILSPDGKVIGEVTSGCPSPCLKMNVAMGYVDTAFAKNGTAIQVEVR 356 Query: 261 GVRVKASF 268 V A+ Sbjct: 357 KRAVPATV 364 >gi|307202909|gb|EFN82129.1| Aminomethyltransferase, mitochondrial [Harpegnathos saltator] Length = 454 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 47/266 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK A +L+++ T D+ L A + G IL +++K +ED + + + + Sbjct: 136 HIIGKDAGEYLESLTTCDLKNLKNGAATLTVFTNDMGGILDDLIVTKDDEDKYFVVSNAA 195 Query: 73 KRDS----LIDKLLFYKLRSN-VIIEIQP--INGVVLSWNQEHTFSNSSFI--------- 116 +R+ L+++ +K V I+ G+V + S + Sbjct: 196 RRNEDSQLLLERQEDFKRTGKNVRIDFLDPLQQGLVALQGPTAAAALQSLVKIDLQTLKF 255 Query: 117 ----------------------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148 ++ F I A L+ R + + + LR Sbjct: 256 MNSVKTEVAGSQVRISRCGYTGEDGFEISVLAKDAVNLVERILEISHVKLAGLGARDSLR 315 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207 + G+ D + P +A + L + + G + + KR ++ Sbjct: 316 LEAGLCLYGNDM-NADTTPVEAALTWLIAKRRRVEANFPGAQRILSQIKTGAAEKRVGLL 374 Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGV 232 G G+PILT + +G + Sbjct: 375 LGQGPPARQGAPILTPEGERVGKVTS 400 >gi|255712579|ref|XP_002552572.1| KLTH0C08030p [Lachancea thermotolerans] gi|238933951|emb|CAR22134.1| KLTH0C08030p [Lachancea thermotolerans] Length = 389 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 92/301 (30%), Gaps = 56/301 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A FL + D LP S +L +G I+ LI+K+ ++ F + + Sbjct: 68 RLEGPGATQFLHRVTPTDFQALPAGQGTLSVLLNARGGIVDDTLITKVADNKFSIVTNAG 127 Query: 73 KRDSLIDKLL--------------------------FYKLRSNVIIEIQPINGVVLSWNQ 106 + I L + L S V +Q + + + Sbjct: 128 RAKEDIAFLNEQVQGFECRWEPVRDRALLALQGPEAKHVLGSLVAGGLQSLQDLYFGQRR 187 Query: 107 --------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 E + S + E S A L ++ A + LR+ Sbjct: 188 SFRAGTGVEIDVARSGYTGEDGFEVSVANSDATDLARMMLENSAVRAIGLAARDSLRLEA 247 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII------RKRP- 204 G+ + P +A ++ L S G +G E I R R Sbjct: 248 GMCLYGHEL-DEDTTPVEASLNWLISKSRRDGS-LG-EFNGFSHIMGQIANKSATRARVG 304 Query: 205 MIITGTDDLPPSGSPILTDDIE--IGTLGVVVGKKALAIARIDKV---DHAIKKGMALTV 259 G + +P+ +D+ + +G + +LA I + K G L V Sbjct: 305 FKYLGKGPAARTDAPVFSDEGKTQVGHVTSGSAAPSLAGINIGQAYVQKGLHKAGTQLFV 364 Query: 260 H 260 Sbjct: 365 G 365 >gi|99081014|ref|YP_613168.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] gi|99037294|gb|ABF63906.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp. TM1040] Length = 380 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 94/304 (30%), Gaps = 54/304 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F+Q + D+ T+ + I +G IL ++ ++ E+ F + + Sbjct: 67 VEITGPDAAKFVQMLTPRDLSTMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 126 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------GVVLSWNQE 107 S ++ + S + ++I + + W +E Sbjct: 127 S---DILLWAQGVAVHSGLDVQICEPDVSPLQLQGPKSGLVMQELFGESIMDLKYYWLRE 183 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151 I R + L + + + + T RI Sbjct: 184 LDLDGIPLIVSRTGWSSELGYELYLRDGSQGDALWERIMAAGMQHGLKPGHTSSIRRIEG 243 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ + D T P + D L + + +IG+ + RIQ R + ++ Sbjct: 244 GMLSYHADADIHT-NPFELGFDRLVNLDMEAD-FIGKAALKRIQKEGPARLQVGLVIDAA 301 Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262 L + PI + IG + V ALA+ + + +T Sbjct: 302 PLRGPNTTFWPITKNGETIGKVTSAVYSPRLEKNIALAMVDAEHAVIGSDVEVTMTSGAT 361 Query: 263 RVKA 266 Sbjct: 362 SASV 365 >gi|33864479|ref|NP_896039.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9313] gi|59797841|sp|Q7TUI6|GCST_PROMM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33641259|emb|CAE22389.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9313] Length = 374 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 102/312 (32%), Gaps = 50/312 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ G + LQA++ D+ + A + +L G IL +I K + Sbjct: 51 SHMGVLRLEGTNPKDHLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVIYDLGTNKQD 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSS 114 + ++ I+ + + L + + + + NGV+L+ E S Sbjct: 111 SQSLLIVINAACSKTDTIWLKQHLQPAGIALSDAKNNGVLLALQGPQATKVLERLSGESL 170 Query: 115 FIDERFSIADVLLHRTWGHNE--------------------KIASDIKTYHELRINHGIV 154 RF V + + K + + +L I Sbjct: 171 ASLPRFGHRQVQFYGLGAKDPSSVFVARTGYTGEDGFELLLKAEAGRALWLKLLAEGVIP 230 Query: 155 D--PNTDFLPSTIFPHDALMDL-LNGISLTKGC-----------YIGQEVVSRIQHRNII 200 + D L H D+ +N G ++G+ + + + I Sbjct: 231 CGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAPFMGRTALEQQAEQGPI 290 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 R+ + + G P+L ++ ++G + +A+A+ + I + Sbjct: 291 RRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVE 350 Query: 257 LTVHGVRVKASF 268 + + G +A+ Sbjct: 351 VEIRGKHHRATV 362 >gi|119716534|ref|YP_923499.1| glycine cleavage system aminomethyltransferase T [Nocardioides sp. JS614] gi|119537195|gb|ABL81812.1| glycine cleavage system T protein [Nocardioides sp. JS614] Length = 371 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 84/269 (31%), Gaps = 53/269 (19%) Query: 22 FLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80 F+ +T D+ + A+ + G ++ ++ ED +L + + ++ + Sbjct: 72 FVNRTLTNDLDRIGPGQAQYTLCCDDATGGVVDDLIVYLHAEDRVLLVPNAANTAEVVRR 131 Query: 81 LLFYKLRSNVIIEIQPINGVVLSWNQ----------------------EHTFSNSSFIDE 118 L V + + + VVL+ E TF++ + + Sbjct: 132 LAA-VAPDGVTVTDRHRDFVVLAVQGTRSDEVLAEVGLPTGHDYMSFVEQTFADETVVVC 190 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY------------------HELRINHGIVDPNTDF 160 R + N +A + LR G D Sbjct: 191 RTGYTGERGYELIAPN-AVAEPLWDALLAAGEEFGMLPCGLGARDTLRTEMGYPLHGQDI 249 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPPSGSP 219 + P++A + + K + G++ ++ + R+ R ++ TG P S Sbjct: 250 SLD-VTPNEARLGW--AVGWRKDAFWGRDKLTAEKAAGPKRQLRGLVATGRGIPRPHMSV 306 Query: 220 ILTDDIEIGTLGVVV------GKKALAIA 242 LT D+ +G + LA+ Sbjct: 307 SLTPDVLLGEVTSGTFSPTLRKGIGLALI 335 >gi|299131740|ref|ZP_07024935.1| glycine cleavage system T protein [Afipia sp. 1NLS2] gi|298591877|gb|EFI52077.1| glycine cleavage system T protein [Afipia sp. 1NLS2] Length = 383 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 45/274 (16%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+ I+ D+L + R + +G IL +++ Sbjct: 60 SHMGQIRLRPKSGRIEDAATALERIVPQDILGIAPGRQRYALFTNDEGGILDDLMVANFG 119 Query: 62 EDTFILEIDRSKRDS---LIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 ++ F++ K L D L L +I +Q V + + ++ Sbjct: 120 DELFLVVNAACKAADEAHLRDHLARDCEIIPLPDRALIALQGPKAVDVLAKFDAAIASMR 179 Query: 115 FID--ER-------------------------FSIADVLLHRTWGHNEKIASDIKTYHEL 147 F+D R + A+ L+ + + L Sbjct: 180 FMDSGPRTLMGIPCFVSRSGYTGEDGFEISVPAADAERLVTTLLADAAVLPVGLGARDSL 239 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-----YIGQEVVSRIQHRNIIRK 202 R+ G+ D T P +A ++ + KG + G + R R+ Sbjct: 240 RLEAGLCLYGHDIDT-TTTPIEAALEWSIQKARRKGGAREGRFPGATTILRQLEEGAPRR 298 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 R + G+P+ D +G V Sbjct: 299 RVGLKVEGRAPVREGAPLFADASSTNKIGRVTSG 332 >gi|332520482|ref|ZP_08396944.1| glycine cleavage system T protein [Lacinutrix algicola 5H-3-7-4] gi|332043835|gb|EGI80030.1| glycine cleavage system T protein [Lacinutrix algicola 5H-3-7-4] Length = 356 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 95/316 (30%), Gaps = 58/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + + D L A+ S + G I+ ++ K++E+T++ Sbjct: 49 SHMGEFLIEGPNALALIQKVCSNDASKLTVGKAQYSCMPNDDGGIVDDLIVYKLKEETYL 108 Query: 67 LEIDRSKRD--------------------------------------SLIDK----LLFY 84 L ++ S + L + FY Sbjct: 109 LVVNASNIEKDWNWISSKNDVNADMRDLSEDYSLLAIQGPNAVEKMQPLSSHDLAEIKFY 168 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 V+ + I V++S + + + T + I + Sbjct: 169 NF---VVGDFAGIENVIISATGYTGSGGFEIYCKNDEVKQIWDKVTQAGAKPIG--LAAR 223 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D T P +A + + TK + + + + + + RK Sbjct: 224 DTLRLEMGYCLYGNDIT-DTTSPLEAGLGWI--TKFTKD-FTNSDALEEQKRQGVDRKLI 279 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +P G I+ + +IG + L I D K + + Sbjct: 280 AFKLDERGIPRQGYDIVDNQGKKIGEVTSGTMSPSLGQGIGLGYVPIIFTDVNSKINIQI 339 Query: 258 TVHGVRVKASFPHWYK 273 V +YK Sbjct: 340 RKKAVPATVVKLPFYK 355 >gi|237653863|ref|YP_002890177.1| glycine cleavage system aminomethyltransferase T [Thauera sp. MZ1T] gi|237625110|gb|ACR01800.1| glycine cleavage system T protein [Thauera sp. MZ1T] Length = 363 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A +L+ ++ DV L A S +L +G ++ ++ + + + Sbjct: 53 SHMLALDLAGPDATTWLRGLLANDVAKLKDNGKALYSCMLNERGGVIDDLIVYRFSDADY 112 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 113 RIVVNAGTAD 122 >gi|45382157|ref|NP_990119.1| aminomethyltransferase, mitochondrial precursor [Gallus gallus] gi|417042|sp|P28337|GCST_CHICK RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|222868|dbj|BAA01937.1| T-protein [Gallus gallus] Length = 392 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 82/273 (30%), Gaps = 48/273 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ + FL++++ D+ L + + +G I+ +++ ED + + Sbjct: 77 RVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNAG 136 Query: 73 KRDSLIDKLLFYK----LRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 D D+ + LR+ +V +E+ + + D+ Sbjct: 137 CAD--KDRAVMEGRAAELRAAGGDVHLEVSGQRAAGVQGPSMAQVLQAGLPDDLTKLTFM 194 Query: 119 ------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR 148 A L R G E + + LR Sbjct: 195 TSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSLR 254 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + G+ D + P +A + G + G ++ RKR + Sbjct: 255 LEAGLCLYGNDI-DESTTPVEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLT 313 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + L P + + + +GT+ +L Sbjct: 314 SVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLG 346 >gi|157364810|ref|YP_001471577.1| glycine cleavage system aminomethyltransferase T [Thermotoga lettingae TMO] gi|166989731|sp|A8F8M9|GCST_THELT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157315414|gb|ABV34513.1| glycine cleavage system T protein [Thermotoga lettingae TMO] Length = 362 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 95/310 (30%), Gaps = 61/310 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ + F+ ++T L + + G I+ L + E + Sbjct: 49 SHMGEIFVEGEDTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRFGEKQAM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWN----------------- 105 L ++ + + D + +S V + + G++ Sbjct: 109 LVVNAANIEKDFDWI---VNQSKQFNVTVRNLSDQYGLIAVQGPLSERFLKTFVSDIDSL 165 Query: 106 -----------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 E F D+ F++ + LL R K A + Sbjct: 166 SYYTFASYSVFGKNCIVSRTGYTGEDGFEIYCHWDDTFTVWNELLQRGNNFGVKPAG-LG 224 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 R+ + D T P + + + + K +IG++ + + + + ++ Sbjct: 225 ARDVCRLEASYMLYGNDM-DETTTPLEVGLSWV--VKFDKD-FIGKDSLIKQKELGLQKR 280 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + + G + + +G + ALA+ + I + Sbjct: 281 IRGLEISDRRIARHGMYVFKGEKRVGVVTSGTFSPTLEKPVALAML---SSEIKISDEIE 337 Query: 257 LTVHGVRVKA 266 + + G +VKA Sbjct: 338 VDIRGSKVKA 347 >gi|296139242|ref|YP_003646485.1| glycine cleavage system protein T [Tsukamurella paurometabola DSM 20162] gi|296027376|gb|ADG78146.1| glycine cleavage system T protein [Tsukamurella paurometabola DSM 20162] Length = 366 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 51/311 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ ++TAD+ + A+ + G ++ ++ + +D Sbjct: 53 SHLGKATVAGPGAKDFVNRVLTADLDKIRPGKAQYTLCTNETGGVIDDLIVYYVSDDELF 112 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + +++ L R ++ +Q V+ + ++ Sbjct: 113 LVPNAANTAAVVAHLRERAPEGITITDQHRDYAVLAVQGPKSAEVLAAVGLPTDMEYMAY 172 Query: 116 IDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHELR 148 D + V + RT WG E + + + LR Sbjct: 173 EDASLNGTPVRVCRTGYTGEHGYELIPAWGDAETVFRALLPEITVRDGQPAGLGARDTLR 232 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMII 207 G + I P A + K ++G++ + + R+ + Sbjct: 233 TEMGYPLHGHELTVD-ITPVQARAGW--AVGWKKPEFVGRDALQAEKEAGPARRLWGLKA 289 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH--- 260 TG L + D IG+ +A+A ID ++KG +TV Sbjct: 290 TGKGVLRADLPVLGADGARIGSTTSGTFSPTLKTGIALALIDS-GAGVEKGTVVTVDVRG 348 Query: 261 -GVRVKASFPH 270 + + + P Sbjct: 349 RAIECEVTLPP 359 >gi|152987967|ref|YP_001348169.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PA7] gi|150963125|gb|ABR85150.1| glycine cleavage system T protein [Pseudomonas aeruginosa PA7] Length = 373 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 84/292 (28%), Gaps = 54/292 (18%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85 ++ D+L LP R + QG IL +++ + D +L ++ + + + L + Sbjct: 74 LVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLLLVVNAACKHQDLAHLRRH- 131 Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI----------------------- 122 L +E +L+ + + + Sbjct: 132 LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFMQFARVELLGQDCYVSRSGY 191 Query: 123 --------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 A+ L R E + LR+ G+ D +T P Sbjct: 192 TGEDGYEISVPAEHAEALARRLLAEPEVAPIGLGARDSLRLEAGLCLYGHDMDSATT-PV 250 Query: 169 DALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-T 222 +A + + G + G E + Q + + KR + G+ I+ Sbjct: 251 EASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDA 310 Query: 223 DDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268 D IG + G LA+ + + + V G V Sbjct: 311 DGRVIGKVSS--GGFGPTLNAPLAMGYVPSALAGLGSEVTAMVRGKPVTLVV 360 >gi|295687778|ref|YP_003591471.1| glycine cleavage system T protein [Caulobacter segnis ATCC 21756] gi|295429681|gb|ADG08853.1| glycine cleavage system T protein [Caulobacter segnis ATCC 21756] Length = 369 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 93/264 (35%), Gaps = 40/264 (15%) Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ ++ G++ A F + +++AD L R +L G ++ + ++ +ED Sbjct: 54 SHMGQARIRGENPAKSF-EKVVSADYQGLKPGKQRYGVLLNADGGVIDDLMTARPDEDGL 112 Query: 66 ILEIDRSKRD--------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + ++ + +D L + +L ++ +Q + + F+D Sbjct: 113 FVVVNGACKDNDYAIIARELAGEATVTRLEDRALLALQGPEAAAVLAAHVPESAQMVFMD 172 Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150 + + A + T +E++ + LR+ Sbjct: 173 AKAVTAFGVDAIVSRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSLRLE 232 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P +A ++ G S + G Y+G + ++R ++ R R + Sbjct: 233 AGLPLYGHDL-DETVSPIEAGLNFAVGKSRREAGDYLGADRIARELAGDLTRVRVNLKVL 291 Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232 G+ I + IG + Sbjct: 292 EGAPAREGAEIADEAGAVIGKVTS 315 >gi|220935921|ref|YP_002514820.1| glycine cleavage system aminomethyltransferase T [Thioalkalivibrio sp. HL-EbGR7] gi|254797884|sp|B8GNE2|GCST_THISH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|219997231|gb|ACL73833.1| glycine cleavage system aminomethyltransferase T [Thioalkalivibrio sp. HL-EbGR7] Length = 363 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 100/308 (32%), Gaps = 49/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +L+ ++ DV L A S +LTP+G ++ + + + + Sbjct: 50 SHMTVVDVQGNGARDYLRFLLANDVAKLKVPGKALYSCMLTPEGGVVDDLITYYLSDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS- 121 L ++ + RD L + + R+ +V+++ + +V S +D + Sbjct: 110 RLVVNAATRD---KDLAWMRDRATGFDVLLQERDDLAMVAVQGPHGRDKALSVLDGEIAR 166 Query: 122 ------------IADVLLHRTWGHNE-------KIASDIKTYHE---------------- 146 D + RT E A + Sbjct: 167 VADALSPFVGGQAGDWFVGRTGYTGEDGFEIMLPAAEAPAFWDRLKVAGVQPAGLGARDT 226 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ G+ D + P ++ + + ++G+ + + + +R+ + Sbjct: 227 LRLEAGMNLYGQDM-DEQVSPLESGLAWTVAFEPAERDFVGRAALEKQKAAGGLRRFVGL 285 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262 + + +L G + ++A+AR+ + + + Sbjct: 286 VLEGRGVLRGHMRVLCGAAGEGEITSGGFSPTLGVSIALARV-PAGTGERVEVDVRGKPQ 344 Query: 263 RVKASFPH 270 + P Sbjct: 345 PARLVKPP 352 >gi|114328490|ref|YP_745647.1| aminomethyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114316664|gb|ABI62724.1| aminomethyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 369 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 101/294 (34%), Gaps = 50/294 (17%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------------ 58 I V G A+ L ++T+D+ + + ++I+ +G I+ +I Sbjct: 61 IINVSGPDAMAVLNNLVTSDLAKISSGSSLITSIVNDEGGIIDDVIIYVDSKTEFRVSHG 120 Query: 59 -------------------KIEEDTFILEIDRSKR-DSLIDKLLF------YKLRSNVII 92 + ++D IL + D L Y + + Sbjct: 121 GGTLEPVLMKDIVGHNVVAERDDDVHILSLQGPLSGDILQPHTELPLSSLSYFSHAQTTL 180 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 +P+ ++ E + +E I D++L +R+ G Sbjct: 181 FGKPVRIARGGYSGETGYEVFCTSEEAGPIWDMILE-AGKSYGAAPVSWSCLDIVRLEGG 239 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TD 211 ++ D P + M I L K + G++ + + R R + + + Sbjct: 240 LLFFPYDMPAENTTPWEVNMGWS--IDLQKTAFRGKKALEAL--RGQERSTIIGLEVLSK 295 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHG 261 + +G+PI D +++G + + K+LAIA I A+ G A++V Sbjct: 296 EAAEAGTPIFHDGVQVGQVTSSIFSQYLMKSLAIATIKPSLSAL--GTAVSVGE 347 >gi|326798588|ref|YP_004316407.1| aminomethyltransferase [Sphingobacterium sp. 21] gi|326549352|gb|ADZ77737.1| Aminomethyltransferase [Sphingobacterium sp. 21] Length = 359 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 94/308 (30%), Gaps = 52/308 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A+ +Q I + D L + + I G I+ FL+ +I+ T++L ++ S Sbjct: 56 LKGERALELVQKISSNDASKLFDGKIQYACIPNETGGIVDDFLVYRIDAKTYLLVVNASN 115 Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115 D + Y L + +Q + + L + +TF F Sbjct: 116 IQKDWDWISKYNTFGVEMKDISDKTSLFAVQGPKATEALQSLTSLDLGEMEYYTFKKGVF 175 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152 + + G E + + LR+ G Sbjct: 176 AGIDNVLVSATGYTGAGGFEIYVDNEHAKEVWEAIMNAGKPFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + TK ++ E + + + I RK Sbjct: 236 FCLYGNDI-DDTTSPLEAGLGWV--TKFTKD-FVNAENLKKQKEEGIQRKLVGFEMIERG 291 Query: 213 LPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G ++ +D IG + L + + + + V+ Sbjct: 292 IPRHGYELVNENDQPIGHVTSGTQSPTLQKSIGLGYLSKEYSKEGTEIYVKIRDKKVKAV 351 Query: 266 ASFPHWYK 273 S P + K Sbjct: 352 VSKPPFIK 359 >gi|89076036|ref|ZP_01162399.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34] gi|89048271|gb|EAR53852.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34] Length = 372 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 97/271 (35%), Gaps = 50/271 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ A L+ ++ D+L LP R + G I +++ D Sbjct: 54 SHMGQVRLKGQHAATLLETLVPVDILDLPVGKQRYAVFTNENGGIEDDLMVTNFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---------TFSNSSFID 117 L ++ + ++ I L + L+ V +E+ ++ + T S+ F+D Sbjct: 113 LVVNAACKEQDIAHLKAH-LKDGVELEVIEDRALLALQGPKAAMVLAELNPTVSDMVFMD 171 Query: 118 E---------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 A+ L NE + LR+ Sbjct: 172 AAKMTLLDVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202 G+ D P T P +A + G+ +G + G +++ ++Q + ++RK Sbjct: 232 CGLCLYGHDLDP-TTTPFEASLMWAITPSRRAGGV--REGGFPGADIILEQLQTKQVLRK 288 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 R ++ + G+ + +D EIG + Sbjct: 289 RVGLVGQSKAPVREGTKLFDAEDNEIGIVTS 319 >gi|261342308|ref|ZP_05970166.1| glycine cleavage system T protein [Enterobacter cancerogenus ATCC 35316] gi|288315649|gb|EFC54587.1| glycine cleavage system T protein [Enterobacter cancerogenus ATCC 35316] Length = 364 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 2/115 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119 L ++ + R+ + + + + I ++ ++ + + F DE+ Sbjct: 110 RLVVNSATREKDLSWISQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTDEQ 164 >gi|146329402|ref|YP_001210080.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A] gi|146232872|gb|ABQ13850.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A] Length = 365 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 93/271 (34%), Gaps = 44/271 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ I + G L+ I+ D L+LP R + +L QG I ++++ Sbjct: 47 SLFDVSHMGQILIRGADVAEKLERIMPMDFLSLPVGKQRYALLLNDQGTIEDDLMVTRRA 106 Query: 62 EDTFILEIDRSKRD---SLIDKLLFYKLRS---NVIIEIQP------------------- 96 +D F L ++ S+++ +++ K ++ +I +Q Sbjct: 107 DD-FYLVVNASRKEHDFAILQKTFGDAMQWWQDRALIALQGPKSAAVLSVLNPAVKDLKF 165 Query: 97 ---------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 +S + IA L + + + + L Sbjct: 166 MQAGMFKILEEDCWVSRSGYTGEDGFEISIP-AKIAMALANALLSDSRVHPAGLGARDSL 224 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRK 202 R+ G+ D T P +A + +G Y G E++++ + R+ Sbjct: 225 RLEAGLCLYGNDIDT-TTTPIEAGIAWAIQKVRKPEGEREGGYPGAEIIAQHIKNGVARR 283 Query: 203 RPMIITGTDDLPP-SGSPILTDDIEIGTLGV 232 R + + LP + I +D E+G + Sbjct: 284 R-VGFSIEGKLPVRQHTKIFHNDKEVGEITS 313 >gi|56461194|ref|YP_156475.1| glycine cleavage system aminomethyltransferase T [Idiomarina loihiensis L2TR] gi|61213263|sp|Q5QVA8|GCST_IDILO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56180204|gb|AAV82926.1| Glycine cleavage system T protein [Idiomarina loihiensis L2TR] Length = 359 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 45/304 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A+ +++L G ++ ++ E+ + Sbjct: 50 SHMTIVDVEGSQAQAFLRYLLANDVAKLKTEGKAQYTSMLNENGGVIDDLIVYFFSENAY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFIDERFSIAD 124 + ++ + RD + + +V + + G + L + E+++ D Sbjct: 110 RMVVNSATRDRDLAWIEKVAADFDVTTKERDDMGMLALQGPKAADKIQGVLTAEQYAEID 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + + LR+ Sbjct: 170 GMKPFVGKDVGDYFIATTGYTGEKGYEIVVPAEQLEALWNDLLKADVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D I P +A M +IG++ + + + K ++ Sbjct: 230 EAGMNLYGQDM-DENITPLEANMGWSVAFEPADRDFIGRKALEQKKAEGHD-KLVGLVME 287 Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + G + + E GT +G ++A+AR+ + + + VK Sbjct: 288 EKGVLRHGQKVTVEGGEGIITSGTFSPTLG-FSVAMARV-PSSVGDTAEVEMRKKQMPVK 345 Query: 266 ASFP 269 P Sbjct: 346 VVKP 349 >gi|163748546|ref|ZP_02155800.1| aminomethyltransferase [Shewanella benthica KT99] gi|161332124|gb|EDQ02801.1| aminomethyltransferase [Shewanella benthica KT99] Length = 364 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 99/310 (31%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKIPGKALYGGMLDYNAGVIDDLITYYLTDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 + ++ + R+ + + +V+I +P ++ +S + Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVITERPELAMIAVQGPNAKVKAASVFNTNQNAAVE 169 Query: 118 ---ERFSI-ADVLLHRTWGHNEKI--------ASDIKTYHE----------------LRI 149 F + AD L T G+ + A + LR+ Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPEAEAEALWQALLEAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M + G+E ++ I+ K +I Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPEDRNFNGREALAAIKAAGT-EKLVGLIME 287 Query: 210 TDDLPPSGSPILTDDIEI---------GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260 + G I D E GT +G ++A+AR+ + + + Sbjct: 288 AKGVIRPGMSIFFTDSEGNEQQGIITSGTFSPTLG-YSIAMARVPRSIGD-TAEVEIRKK 345 Query: 261 GVRVKASFPH 270 V VK P Sbjct: 346 RVAVKVIKPS 355 >gi|319784834|ref|YP_004144310.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170722|gb|ADV14260.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 789 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 95/304 (31%), Gaps = 54/304 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G + LQ +T DV L SA+ G ++ + ++ +D F Sbjct: 459 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 518 Query: 66 -IL---EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94 + ++ KL LR S + I Sbjct: 519 RWIGGDDLSGEWLRETATKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVIWTSPLQPSI 578 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142 ++ + + + + R L + W EK+ I Sbjct: 579 DELDWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 638 Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +RI G++ +F T P +A + + ++G+E + R + Sbjct: 639 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKSKTDDFVGREALIRRKEH 697 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKK 253 + + I D+ G + +IG + V K +A+AR+D A+ Sbjct: 698 PQTKLVGLDIDANVDVGH-GDCVHVGRAQIGVVTSGMRSPVLNKTIALARLDVTHSAVGT 756 Query: 254 GMAL 257 + + Sbjct: 757 EVEI 760 >gi|53802493|ref|YP_112882.1| glycine cleavage system aminomethyltransferase T [Methylococcus capsulatus str. Bath] gi|59797675|sp|Q60BW3|GCST_METCA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|53756254|gb|AAU90545.1| glycine cleavage system T protein [Methylococcus capsulatus str. Bath] Length = 360 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 34/259 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + V G A PFL+ ++ DV L +L G I+ ++ I++ F Sbjct: 50 SHLGVVDVEGLQAAPFLRRVLANDVARLAEPGRMLYGCMLNQDGGIVDDLVVGFIDDRRF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------------NGVVLSWNQEHTF 110 L ++ R+ + L +V + + + VV + + Sbjct: 110 RLILNAGTREKDLSWLHRQAAPFSVTVTPRDDLAMIALQGPDSPRIADAVVAAGSSGLKP 169 Query: 111 SNSSFIDERF-----------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 ++ +RF L R + LR+ G+ Sbjct: 170 FTATQRGDRFIARTGYTGEDGFEIILPHAEAGSLWRQLFQAGARPCGLGARDTLRLEAGM 229 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D T+ P + + +IG+ + R + K +I + Sbjct: 230 RLYGQDM-DETVTPLACGLGWTVAWEPEERDFIGRAALERERIGGSPSKFVGLILEEPGI 288 Query: 214 PPSGSPILTDDIEIGTLGV 232 SG + ++ G + Sbjct: 289 LRSGQKVAVANVGEGVVTS 307 >gi|68535275|ref|YP_249980.1| glycine cleavage system aminomethyltransferase T [Corynebacterium jeikeium K411] gi|260578514|ref|ZP_05846426.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC 43734] gi|123651656|sp|Q4JXU5|GCST_CORJK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|68262874|emb|CAI36362.1| glycine cleavage system T protein [Corynebacterium jeikeium K411] gi|258603353|gb|EEW16618.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC 43734] Length = 389 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A FL A+I+ + + A+ S I T G I+ + ++ ++ Sbjct: 51 LSHMGEVRVTGPQAAEFLDHALIS-KLSAVKVGKAKYSMICTESGGIIDDLITYRLGDNE 109 Query: 65 FILEIDRSKRDSLIDKLL 82 F++ + D+++ L Sbjct: 110 FLIVPNAGNVDNVVSALQ 127 >gi|325109415|ref|YP_004270483.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305] gi|324969683|gb|ADY60461.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305] Length = 364 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 100/312 (32%), Gaps = 58/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A FL + T DV L R + G LI ++ D F+ Sbjct: 49 SHMGRVRVSGSEADAFLNYVTTIDVTKLQPGRIRYALATNEHGGTKDDILIYRLA-DHFL 107 Query: 67 LEIDRSKRDSLID----KLLFYK-------LRSNVIIEIQPINGVVL------------- 102 + ++ S R+ L++ +L + S +I +Q + + Sbjct: 108 VVVNASNREKLLEAWQAELSNFAGTEMQDETFSTAMIAVQGPHAAAILESMSAGVDDLRY 167 Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------- 144 W E T + + R G NE+I ++ + Sbjct: 168 YRWR-EITLDGTQYFVSRTGYTGEDGFELIGPNEQI---VELWGQILQAGAEFGVTPCGL 223 Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ + + A + I +K ++G+E + R Sbjct: 224 GCRDTLRLEAGMPLYGHEL-SEELDGVSAGLQF--AIDFSKTDFLGKEPLERRNSEGTQL 280 Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMA 256 R + + + + + +G + KA+A+A + I + Sbjct: 281 IRVGLELEGRRIAREHAEVFNAEGETVGAVSSGTFSPTLNKAIAMAYVRPDVATIGTKLT 340 Query: 257 LTVHGVRVKASF 268 + + G + AS Sbjct: 341 IDIRGTKAPASV 352 >gi|134102066|ref|YP_001107727.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] gi|133914689|emb|CAM04802.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] Length = 815 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 49/263 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69 +V G+ A+ LQ + T + P + +L P G I ++++ D F + Sbjct: 506 EVSGRGALELLQRLTTNQLDR-PPGYVTYTLMLEPTGGIRADITVARLSRDVFQVGCNGP 564 Query: 70 --------------------------------DRSKRDSLI------DKLLFYKLRSNVI 91 R L + F++ R + Sbjct: 565 RDIAWLRGHADETVSVRDITGGTCCIGLWGPRARDILAPLAGEDISHEAFRFFRARR-LH 623 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + P+ + LS+ E + + + + D+L GH + + ++ LR+ Sbjct: 624 VREVPVTALRLSYVGELGWELYTSAEFGLRLWDLLAAEGAGHG-AVPAGRGAFNGLRMEK 682 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G TD S P +A +D + KG ++G++ + R + N R++ +T D Sbjct: 683 GYRAWGTDMW-SVHDPDEAGLDF--AVKTGKGDFVGRDALLR-RRENPPRRKLCCVTIDD 738 Query: 212 DLPPSGS-PILTDDIEIGTLGVV 233 GS P+L +G Sbjct: 739 GTVLMGSEPVLKGSETVGFTTSA 761 >gi|317968272|ref|ZP_07969662.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. CB0205] Length = 370 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 62/307 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------KI 60 S+ +++ G + +Q ++ +D+ + A S +L +G I +I Sbjct: 55 SHMGVLRLRGANVKDAMQGLVPSDLFRIGPGEACYSVLLNAEGGIRDDLIIYDRGWLENE 114 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI---IEIQPI--NGVVLSWNQEHT------ 109 + +L I+ + +S +RS + IE+ + +G +L+ T Sbjct: 115 QVHELVLVINAACAESDTAW-----MRSQLEPAGIELIDLKGSGTLLALQGPETAQLLEE 169 Query: 110 FSNSSFID-ERF-------------------------------SIADVLLHRTWGHNEKI 137 + S RF + A T Sbjct: 170 LAGCSLAGLPRFGHRELTLPGLGEAFVGRTGYTGEDGFELLLSADAGQRFWTTCLERGVK 229 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + LR+ G+ +D ST P +A + L + + K +IG+ V+ + Sbjct: 230 PCGLGARDTLRLEAGMHLYGSDMDASTS-PLEAGLGWLVHLEMPKD-FIGRPVLEQQTAD 287 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKK 253 + R+ + +P G P+L + +GT+ +A+A + A K Sbjct: 288 GLKRRLVGLKLQGRAIPRHGYPVLQNGEVVGTVTSGTWSPSLQAGIALASV--ATGAAKL 345 Query: 254 GMALTVH 260 G +L V Sbjct: 346 GTSLAVE 352 >gi|86130709|ref|ZP_01049309.1| aminomethyltransferase [Dokdonia donghaensis MED134] gi|85819384|gb|EAQ40543.1| aminomethyltransferase [Dokdonia donghaensis MED134] Length = 363 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ A+ LQ + + DV + A+ + G I+ ++ +I+ED ++ Sbjct: 49 SHMGEFLVSGEKALDLLQWVCSNDVSKIKVGGAQYNCFPNATGGIVDDLIVYRIKEDQYM 108 Query: 67 LEIDRSKRD 75 L ++ S D Sbjct: 109 LVVNASNID 117 >gi|257454446|ref|ZP_05619708.1| glycine cleavage system T protein [Enhydrobacter aerosaccus SK60] gi|257448212|gb|EEV23193.1| glycine cleavage system T protein [Enhydrobacter aerosaccus SK60] Length = 377 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 5/161 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIE--ED 63 S+ + G+ A +LQ ++ DV L + A SA+L G ++ ++ ++ E Sbjct: 56 SHMVVTDIAGQDAKAWLQKLLANDVAKLKFVGKALYSAMLNENGGVIDDLIVYRMNDAET 115 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 + + + + RD + + V I +P +L+ + S ++ + Sbjct: 116 EYRIVSNAATRDKDLAQFDKVAKDFAVTITERPEL-AMLAVQGPNALQKLSQAKPNWADS 174 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164 L G + + + R + D LP Sbjct: 175 LATLKPFVGK-DLTDIEGADWFVARTGYTGEDGVEVILPQA 214 >gi|291004899|ref|ZP_06562872.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] Length = 822 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 49/263 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69 +V G+ A+ LQ + T + P + +L P G I ++++ D F + Sbjct: 513 EVSGRGALELLQRLTTNQLDR-PPGYVTYTLMLEPTGGIRADITVARLSRDVFQVGCNGP 571 Query: 70 --------------------------------DRSKRDSLI------DKLLFYKLRSNVI 91 R L + F++ R + Sbjct: 572 RDIAWLRGHADETVSVRDITGGTCCIGLWGPRARDILAPLAGEDISHEAFRFFRARR-LH 630 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + P+ + LS+ E + + + + D+L GH + + ++ LR+ Sbjct: 631 VREVPVTALRLSYVGELGWELYTSAEFGLRLWDLLAAEGAGHG-AVPAGRGAFNGLRMEK 689 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G TD S P +A +D + KG ++G++ + R + N R++ +T D Sbjct: 690 GYRAWGTDMW-SVHDPDEAGLDF--AVKTGKGDFVGRDALLR-RRENPPRRKLCCVTIDD 745 Query: 212 DLPPSGS-PILTDDIEIGTLGVV 233 GS P+L +G Sbjct: 746 GTVLMGSEPVLKGSETVGFTTSA 768 >gi|50119688|ref|YP_048855.1| glycine cleavage system aminomethyltransferase T [Pectobacterium atrosepticum SCRI1043] gi|59797740|sp|Q6D976|GCST_ERWCT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|49610214|emb|CAG73657.1| glycine cleavage system T protein (aminomethyltransferase) [Pectobacterium atrosepticum SCRI1043] Length = 371 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + V I + +V + Sbjct: 110 RLVVNSATREKDLAWIEQHAAAFGVDIRERDELALVAVQGPQA 152 >gi|239624330|ref|ZP_04667361.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520716|gb|EEQ60582.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 384 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I GK A+ L ++T D + AR S + +G ++ ++ K+ +D + Sbjct: 75 SHMGEIICKGKDALKNLNMLLTNDYTVMAEGQARYSPMCNEEGGVVDDLIVYKVRDDCYF 134 Query: 67 LEIDRSKRD 75 + ++ S +D Sbjct: 135 IVVNASNKD 143 >gi|148358276|ref|YP_001249483.1| glycine cleavage system T protein [Legionella pneumophila str. Corby] gi|296105627|ref|YP_003617327.1| glycine cleavage system T protein [Legionella pneumophila 2300/99 Alcoy] gi|166221556|sp|A5I9T7|GCST_LEGPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|148280049|gb|ABQ54137.1| glycine cleavage system T protein [Legionella pneumophila str. Corby] gi|295647528|gb|ADG23375.1| glycine cleavage system T protein [Legionella pneumophila 2300/99 Alcoy] Length = 360 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 53/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 + ++ + R + + + R+ V ++ + ++ S + Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164 Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144 F DV L + + Sbjct: 165 VDAVSTLTPFECVDVDHWFFARTGYTGEDGLEIIVPNEFITQLWNDLLNAGVTPCGLGAR 224 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ D T P ++ + +IG + + + I RK Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + G ++ + G + +++A+AR+ V+ + + + Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342 Query: 261 GVRVKASFPHWYK 273 + K P + K Sbjct: 343 LIPAKVGKPRFIK 355 >gi|227329474|ref|ZP_03833498.1| glycine cleavage system aminomethyltransferase T [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 371 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDNF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + V I + +V + Sbjct: 110 RLVVNSATREKDLAWIGQHAAPFGVEIRERDDLALVAVQGPQA 152 >gi|254503753|ref|ZP_05115904.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222439824|gb|EEE46503.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 813 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 95/319 (29%), Gaps = 60/319 (18%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S+ I+V G A FL + AD+ ++P + +L G I ++++ E Sbjct: 485 LYDMSSFGKIRVEGPDAERFLNHVCGADM-SVPTGRIVYTQMLNEAGGIEADVTVTRLSE 543 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +++ + R + L + V++ VL+ + I Sbjct: 544 TAYLMVTPAATRLADQTWLRRHMGDHQVVLTDVTSGEAVLALMGPRSRELLGRISPNDFT 603 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHG----------------IVDPNTDFLPSTIF 166 + +G + I + R+++ + + + Sbjct: 604 NET---NPFGTAQDIEIGMALARAHRVSYVGELGWEIYVPTEFAAHVFETLREAGRDEGL 660 Query: 167 PHDALMDLLN------------------------GISL----TKGCYIGQEVVSRIQHRN 198 + ++ G+ +K +IG++ V + Sbjct: 661 KL-CGLHAMDSCRMEKAFRHFGHDITCEDHVIDAGLGFAAKTSKPGFIGRDAVLERKETG 719 Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL-AIARI-------DKVD 248 + R + D P PIL + G L AL A + + Sbjct: 720 -PKSRLVQFQLQDPEPMLYHAEPILREGEVCGYLSSGAYGHALGAAIGLGYVPCDGESAA 778 Query: 249 HAIKKGMALTVHGVRVKAS 267 + + + + G RV A+ Sbjct: 779 NVLGSAYEIEIAGTRVPAT 797 >gi|171056846|ref|YP_001789195.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix cholodnii SP-6] gi|170774291|gb|ACB32430.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix cholodnii SP-6] Length = 790 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 86/297 (28%), Gaps = 66/297 (22%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A +Q +T D+ L SA+ P G +L + ++ D F Sbjct: 460 LSALRKFEVIGPDAEALMQHCLTRDIKKLAVGQVVYSAMCYPHGGMLDDGTLLRLGPDNF 519 Query: 66 ILEIDRSKR----DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111 KL V I+ + ++ + Sbjct: 520 RWICGEDYAGIWLREQAQKLGM-----KVWIKSASDHIHNIAVQGPRSRELLSQMVSSPG 574 Query: 112 ----------------------NSSFIDERFSIADVLLH----------RTWGHNEKIAS 139 + R L + R W ++ + Sbjct: 575 TQPTLDKLGWFRFLVGRLDDHNGCPIMVSRTGYTGELGYEVWCHPSDAPRVWARIWELGA 634 Query: 140 D-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VV 191 ++ LRI G+V +F T P +A + + +IG++ ++ Sbjct: 635 PLGLTPLGLEALDTLRIEAGLVFAGYEFCDQTD-PFEAGIGFCVPLKSKTDDFIGRDALI 693 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 R H RK ++ ++ G + ++G + + +A+ RI Sbjct: 694 ERAAH--PQRKLVGLVLDGNETAAHGDGVYIGHAQVGVITSATRSPLTGQNIALCRI 748 >gi|239944453|ref|ZP_04696390.1| glycine cleavage system aminomethyltransferase T [Streptomyces roseosporus NRRL 15998] gi|239990910|ref|ZP_04711574.1| glycine cleavage system aminomethyltransferase T [Streptomyces roseosporus NRRL 11379] gi|291447917|ref|ZP_06587307.1| glycine cleavage system aminomethyltransferase T [Streptomyces roseosporus NRRL 15998] gi|291350864|gb|EFE77768.1| glycine cleavage system aminomethyltransferase T [Streptomyces roseosporus NRRL 15998] Length = 371 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 54/299 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E Sbjct: 52 LSHMGEITVTGLEAAAFLSYALVGN-IATVGNGRARYTMIVQEDGGIVDDLIVYRLGETE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93 +++ + ++D L Y L + + + Sbjct: 111 YMVVANAGNAQIVLDALTERVGGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170 Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143 + + ++ F+ + A L + I + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEALWQALTEAGAPHGLIPCGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + + + P DA + + + K G +IG+E ++ R Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFIGREALTAAAERAETAP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254 RK +I +P +G P++ D IG + L A+A +D A G Sbjct: 288 PRKLVGLIAEGRRVPRAGFPVVADGKVIGEVTSGAPSPTLGKPIAMAYVDAAFAAPGTG 346 >gi|220914199|ref|YP_002489508.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter chlorophenolicus A6] gi|219861077|gb|ACL41419.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter chlorophenolicus A6] Length = 830 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 55/273 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ LQ + TA++ + +L QG + ++++ EDTF L + Sbjct: 511 LEVSGPGALKLLQELTTAEMNK-KPGAVTYTLLLDEQGGVRSDITVARLSEDTFQLGANG 569 Query: 72 SKRDSLIDKLLFYK---------------------------------------------- 85 + + D+ ++ Sbjct: 570 NIDTAYFDRAARHQTANGTAEDWVQVRDTTGGTCCIGLWGPLAREVVGEVSSDDFTNDGL 629 Query: 86 --LRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 RS V+I P+ + LS+ E + + D + D L + IA+ Sbjct: 630 KYFRSKQVVIGGVPVTAMRLSYVGELGWELYTSADNGQRLWDAL-WKAGQPFGIIAAGRA 688 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIR 201 + LR+ G TD P +A + + + K ++G+ + R + + R Sbjct: 689 AFSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKEDFVGKAALEGRTEETSARR 745 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + + P+ D +G + Sbjct: 746 LRCLTVDDGRSIVLGKEPVFYKDQAVGYVTSAA 778 >gi|237729847|ref|ZP_04560328.1| glycine cleavage system aminomethyltransferase T [Citrobacter sp. 30_2] gi|226908453|gb|EEH94371.1| glycine cleavage system aminomethyltransferase T [Citrobacter sp. 30_2] Length = 364 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 96/312 (30%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123 L ++ + R+ + + + + I ++ ++ + + F DE R ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169 Query: 124 D----------------------------------VLLHRTWGHNEKIASDIKTYHELRI 149 R + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVQAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN----------- 198 G+ + I P +A M +IG+E + + + Sbjct: 230 EAGMNLYGQEMDEG-ISPLEANMGWTIAWEPADRDFIGREALEMQREKGHEQLVGLVMTE 288 Query: 199 -IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 289 KGVLRNELPVRFTDASGNQHEGIITSGTFSPTLG-----YSIALARV-PAGIGETAIVQI 342 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 343 RNREMPVKVTKP 354 >gi|194762058|ref|XP_001963177.1| GF15818 [Drosophila ananassae] gi|190616874|gb|EDV32398.1| GF15818 [Drosophila ananassae] Length = 405 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 64/310 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK A L+++ TAD+L P + T QG IL +++K+ E + + + Sbjct: 81 RVFGKDAAACLESVCTADILGTPNGSGTLTVFTTEQGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRDS----LIDKLLFYKLRSN-VIIE-IQPINGVVLSWNQEHTFSN-------------- 112 ++ + + + +K + V IE + P + +++ Sbjct: 141 MKEQDTGIMSEAVNKFKSQGKDVTIEFLTPSDQSLVAVQGPQVAKELAKLLEKNVSLDEV 200 Query: 113 ---SSFIDERFSIADVLLHR------------------------TWGHNEKIASDIKTYH 145 SF+ I DV + R + + Sbjct: 201 YFMQSFVTTLAGIPDVRITRCGYTGEDGVEISVKSSQVENLTECLLESGSLKLAGLGARD 260 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204 LR+ G+ +D + P +A + L + G + + R+R Sbjct: 261 SLRLEAGLCLYGSDI-DAKTTPVEAALAWLVAKRRRTAQDFPGANTIIGQLKTGVSRRRV 319 Query: 205 -MIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258 + + G P +G I + ++G + K +A+ + +L Sbjct: 320 GLQMLGQKPPPARAGVAIFSQGQQVGQVTSGCPSPSAGKNIAMGYV---------AESLK 370 Query: 259 VHGVRVKASF 268 G +V+ Sbjct: 371 APGTKVELKI 380 >gi|73543011|ref|YP_297531.1| glycine cleavage system aminomethyltransferase T [Ralstonia eutropha JMP134] gi|123623801|sp|Q46VZ7|GCST_RALEJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|72120424|gb|AAZ62687.1| Glycine cleavage system T protein [Ralstonia eutropha JMP134] Length = 375 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G + FL+ ++ +V L A S +L +G ++ ++ ED F Sbjct: 51 SHMCVVDLNGANTRAFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110 Query: 66 ILEIDRSKR 74 L ++ S Sbjct: 111 RLVVNASTA 119 >gi|209546029|ref|YP_002277919.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538886|gb|ACI58819.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 377 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 100/314 (31%), Gaps = 73/314 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 + + G AI L A+ T D+ + + + +L +G ++ + + ++L Sbjct: 59 VHLVGPHAIAVLDAMTTRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNAWMLVHGS 118 Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 D L +D L Y + I + Sbjct: 119 GSGHEEIVRQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ + Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + D ++G + + KK++AIAR+D VD A+ Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 343 Query: 254 GMALTVHGVRVKAS 267 G L V G VKAS Sbjct: 344 GTKLEVRGKTVKAS 357 >gi|91792194|ref|YP_561845.1| glycine cleavage system aminomethyltransferase T [Shewanella denitrificans OS217] gi|123166418|sp|Q12R04|GCST_SHEDO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|91714196|gb|ABE54122.1| glycine cleavage system T protein [Shewanella denitrificans OS217] Length = 364 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVTGQDARDFLRKLLANDVAKLTVPGKALYGGMLDDNAGVIDDLITYYLSDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++ + R+ + + +V I +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSAPFSVTITERPELAMIAVQGPNAKAKAATVFTP 162 >gi|145219266|ref|YP_001129975.1| aminomethyltransferase [Prosthecochloris vibrioformis DSM 265] gi|189039315|sp|A4SDB4|GCST_PROVI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|145205430|gb|ABP36473.1| aminomethyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 365 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 48/277 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G+ A+ FLQ++ T D+ A+ + +L G I+ +I +I+ TF Sbjct: 49 SHMGNFYVKGRRALEFLQSVTTNDLSRTVDGQAQYTIMLYENGGIVDDLIIYRIDSVTFF 108 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119 L ++ D L + V + +++ FS S + Sbjct: 109 LIVNAGNCDKDFAWLEEHAGAFEGVQLSNHSDQLSLIALQGPKAFSILSRVIPEIDADRL 168 Query: 120 ---------FSIADVLLHRTWGHNEK---------------------------IASDIKT 143 F A++++ RT E + + Sbjct: 169 PSFHFRQLPFMGAELMVARTGYTGEAGVEICLPNALAQPLWEALLDAGREDGLVPVGLGA 228 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G + P +A + + +S+ KG +IG+E +++ Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VSMEKGPFIGREACRQVELDPRFGVA 285 Query: 204 PMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKAL 239 + G L G + D EIG + L Sbjct: 286 GFSLEGR-ALARQGCRVFNADRQEIGKVCSGTISPTL 321 >gi|159471752|ref|XP_001694020.1| predicted protein [Chlamydomonas reinhardtii] gi|158277187|gb|EDP02956.1| predicted protein [Chlamydomonas reinhardtii] Length = 404 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S ++V G + L T D L + +T G+ L + + + + Sbjct: 111 SHWSRLRVSGDDRLTLLHNQSTQDFKALRPGQGADTVFVTATGRCL-DLATALVLPSSVM 169 Query: 67 LEIDRSKRDS-----------LIDKLLFYKLR-SNVII 92 L + D L+++L R V + Sbjct: 170 LMVAEGTSDEAARGARPAGAALLERLNKMIFRGDKVAV 207 >gi|302537058|ref|ZP_07289400.1| glycine cleavage system T protein [Streptomyces sp. C] gi|302445953|gb|EFL17769.1| glycine cleavage system T protein [Streptomyces sp. C] Length = 371 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 105/305 (34%), Gaps = 55/305 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G A+ L A++ + T+ AR + I G IL ++ ++ E+ Sbjct: 52 LSHMGEITLTGPEAVKALDYALVGN-ISTVGVGRARYTHICQEDGGILDDLIVYRLGENE 110 Query: 65 FILEIDRSKRDSLIDKLLFYK------LR----SNVIIEIQ--------------PINGV 100 +++ + S ++D L +R + +I +Q ++G+ Sbjct: 111 YMVVANASNAQVVLDALTERAAGFDTEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 T + + R + E + + + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPEHAVELWQALTAAGEGAGLVPAGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199 LR+ G+ + + + P DA + + + K G ++G+ E + + Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALEAAAEVAATKP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 RK ++ +P +G P++ IG + L A+A +D +HA Sbjct: 288 PRKLVGLVAEGRRVPRAGFPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVD-AEHAAPGTS 346 Query: 256 ALTVH 260 + V Sbjct: 347 GVGVD 351 >gi|291515244|emb|CBK64454.1| aminomethyltransferase [Alistipes shahii WAL 8301] Length = 366 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ LQ I T DV L + + + +G I+ L+ +++ +T++ Sbjct: 49 SHMGEIWVKGPRALDLLQRITTNDVSKLFDGKVQYTCMPNGRGGIVDDILVYRVDAETYM 108 Query: 67 LEIDRSKRDSLIDKL 81 L ++ + D + Sbjct: 109 LCVNAANIDKDWKHI 123 >gi|28198080|ref|NP_778394.1| glycine cleavage system aminomethyltransferase T [Xylella fastidiosa Temecula1] gi|182680707|ref|YP_001828867.1| glycine cleavage system aminomethyltransferase T [Xylella fastidiosa M23] gi|31340112|sp|Q87EZ6|GCST_XYLFT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238691061|sp|B2I6Q1|GCST_XYLF2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|28056140|gb|AAO28043.1| aminomethyltransferase [Xylella fastidiosa Temecula1] gi|182630817|gb|ACB91593.1| glycine cleavage system T protein [Xylella fastidiosa M23] Length = 368 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 ++ + R+ + + NV +E + ++ ++ + E Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169 Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146 RF+ +V H RT E I ++ Sbjct: 170 KLGRFAALEVASHSKKPLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT E G + KA+ AR+ + + + Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345 Query: 261 GVRVKASF 268 + V+ Sbjct: 346 EIPVRVVK 353 >gi|326332985|ref|ZP_08199242.1| putative N,N-dimethylglycine oxidase [Nocardioidaceae bacterium Broad-1] gi|325949343|gb|EGD41426.1| putative N,N-dimethylglycine oxidase [Nocardioidaceae bacterium Broad-1] Length = 834 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 54/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A LQ + T DV + L QG I ++++E++ F + + Sbjct: 516 LEVSGPGAEALLQRLTTGDVSK-KPGAVTYTLFLDEQGGIKSDITVARLEDEVFQVGANG 574 Query: 72 SKRDSLIDKLLFYKLR-------------------------------SNVIIEIQPINGV 100 + + + KLR + V + +G+ Sbjct: 575 PVDLAYLRREAR-KLRAEDPALAAHVRDITGGTCCIGLWGPLARDLIAEVSADDFTNDGL 633 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 + T R S L + E IA+ Sbjct: 634 KYFRGKRATIGGIPVTALRLSYVGELGWEIYASAENGQKLWDVLWEAGQEHGVIAAGRAA 693 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202 + LR+ G D P++A + + K ++G+ + R + R Sbjct: 694 FGALRLEKGYRSWGADMTTEHD-PYEAGVGF--AVKTAKEDFVGKAALEGRSVETSARRL 750 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + I + P+L+ + +G + Sbjct: 751 RCLTIDDGKSMVLGKEPVLSGETSVGYVTSAA 782 >gi|15963857|ref|NP_384210.1| putative aminomethyltransferase protein [Sinorhizobium meliloti 1021] gi|307309558|ref|ZP_07589213.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti BL225C] gi|307320390|ref|ZP_07599807.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti AK83] gi|15073032|emb|CAC41491.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021] gi|306893956|gb|EFN24725.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti AK83] gi|306900018|gb|EFN30639.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti BL225C] Length = 789 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 88/296 (29%), Gaps = 58/296 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYEHGGMIDDGTLFRLGDK 516 Query: 64 TF-ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-HTFSNSSFIDERFS 121 F + D L ++ R+ V ++ + + + + R Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFRAWVRSSTDQMHNIAVQGPKSRDILKEIVWTAPRQP 576 Query: 122 IADVL----------------------------------------------LHRTWGHNE 135 L + R + Sbjct: 577 TIGELEWFRFAVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWRAGEPHG 636 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 ++ +RI G++ + DF T P +A + + +IG+E + R Sbjct: 637 LRPMGLEALDMVRIEAGLIFAHYDFDDQTD-PFEAGIGFTVPLKSKHDDFIGREALIR-- 693 Query: 196 HRNIIRKRPMIIT--GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 R + M+ ++ G + +IG + K +A+ARID Sbjct: 694 -RKENPRHLMVGLDIQANEAVGHGDCVHVGRAQIGVITSATRSPVLGKTIALARID 748 >gi|229820406|ref|YP_002881932.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333] gi|229566319|gb|ACQ80170.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333] Length = 381 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 46/272 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + I+V G +A L A + + V L AR + +L P G +L ++ ++ D F Sbjct: 57 LSHMAQIEVTGPAAAAGLDASVVSRVAALEVGRARYTMLLAPDGGVLDDVIVYRLAADDF 116 Query: 66 ILEIDRSKRDSLIDKLL------------FYKLRSNV----------------------- 90 ++ + + R +++D L RS V Sbjct: 117 LVVANAANRLTVLDALTARCPGTGVAVTDRTTQRSLVALQGPVAERVLGTLTDTDVTALR 176 Query: 91 --IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK----IASDIKTY 144 I + GV + F + + V + R I + Sbjct: 177 YYTIAAATVAGVPALLARTGYTGEDGFEVSVPASSAVSVWRALLEAGAAEGVIPCGLAAR 236 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ + +T P +A + + + + ++G+ + R + R R Sbjct: 237 DSLRLEAGMPLYGHEI-DATTTPFEAGLGRIVHLDPDRE-FVGRAALERRRDEPGAR-RL 293 Query: 205 MIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV 234 + + G +G P+L D +GT+ V Sbjct: 294 VGLAGEGRRAARAGYPVLDADGATVGTVTSGV 325 >gi|237713459|ref|ZP_04543940.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. D1] gi|262407245|ref|ZP_06083793.1| glycine cleavage system T protein [Bacteroides sp. 2_1_22] gi|294647320|ref|ZP_06724913.1| aminomethyltransferase [Bacteroides ovatus SD CC 2a] gi|294809058|ref|ZP_06767780.1| aminomethyltransferase [Bacteroides xylanisolvens SD CC 1b] gi|229446441|gb|EEO52232.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. D1] gi|262354053|gb|EEZ03145.1| glycine cleavage system T protein [Bacteroides sp. 2_1_22] gi|292637279|gb|EFF55704.1| aminomethyltransferase [Bacteroides ovatus SD CC 2a] gi|294443783|gb|EFG12528.1| aminomethyltransferase [Bacteroides xylanisolvens SD CC 1b] Length = 361 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71 V G A+ FLQ I + +V L + + +G I+ L+ + E + ++L ++ Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEEGGIVDDLLVYQYEPEKYMLVVNAAN 115 Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ ++ D + ++ ++ +Q + + L+ +TF +F Sbjct: 116 MEKDWNWCVSHNTEGAELENSSDNIAQLAVQGPKAVLALQKLTDIDLASIPYYTFKVGTF 175 Query: 116 IDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------HELRINHG 152 E I + G E + + Y LR+ G Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPSVADRIWKAVFEAGEEYGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K +I + ++ + + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKD-FINRPLLEKQKTEGVTRKLVGFEMVDRG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G ++ + ++G + + + + + + + ++ Sbjct: 294 IPRHGYELVNAEGEQVGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|283835329|ref|ZP_06355070.1| glycine cleavage system T protein [Citrobacter youngae ATCC 29220] gi|291068491|gb|EFE06600.1| glycine cleavage system T protein [Citrobacter youngae ATCC 29220] Length = 364 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + + I ++ ++ + + F DE+ + Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTDEQRHATE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAAAFWRALVQAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN----------- 198 G+ + I P +A M +IG+E + + + Sbjct: 230 EAGMNLYGQEMDEG-ISPLEANMGWTIAWEPADRDFIGREALEMQREKGHEQLVGLVMTE 288 Query: 199 -IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 289 KGVLRNELPVRFTDTSGNQHEGIITSGTFSPTLG-----YSIALARV-PAGIGETAIVQI 342 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 343 RNREMPVKVTKP 354 >gi|160887359|ref|ZP_02068362.1| hypothetical protein BACOVA_05378 [Bacteroides ovatus ATCC 8483] gi|237722659|ref|ZP_04553140.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 2_2_4] gi|298482664|ref|ZP_07000848.1| glycine cleavage system T protein [Bacteroides sp. D22] gi|299148936|ref|ZP_07041998.1| glycine cleavage system T protein [Bacteroides sp. 3_1_23] gi|156107770|gb|EDO09515.1| hypothetical protein BACOVA_05378 [Bacteroides ovatus ATCC 8483] gi|229448469|gb|EEO54260.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 2_2_4] gi|295087137|emb|CBK68660.1| aminomethyltransferase [Bacteroides xylanisolvens XB1A] gi|298271127|gb|EFI12704.1| glycine cleavage system T protein [Bacteroides sp. D22] gi|298513697|gb|EFI37584.1| glycine cleavage system T protein [Bacteroides sp. 3_1_23] Length = 361 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ I + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYMLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 ME 117 >gi|297182876|gb|ADI19027.1| glycine cleavage system t protein (aminomethyltransferase) [uncultured alpha proteobacterium HF0070_05I22] Length = 403 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 64/283 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F + D+ + + L G I+ ++ ++ ED F + Sbjct: 83 VEISGPDAKSFANLVFARDLSRVAVGRCLYNFALYHNGNIITDGIMLRLAEDKFWMV--- 139 Query: 72 SKRD-SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDE----- 118 + D L + + +V I V +S Q + F D Sbjct: 140 -QADGELFKWYMAHAHHFDVTIS---DPNVWVSQIQGPRSMDVLRGAIDGEFPDPWRYFD 195 Query: 119 --------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHE 146 L+ + + I + + Sbjct: 196 VATVSIAGENVIITRTGFSNELGWEFYLRPENNAEKVGNLIWKVGRKHGMILTSTPVFRA 255 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI G++ +F T P +A + + + K +IG+ + + R R Sbjct: 256 RRIEAGLL-TQAEFDIETT-PFEAGLGHF--MEMEKENFIGKAALEKAD----KRSRTFG 307 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245 + + G IL D+ +G + +A+ R+D Sbjct: 308 MRIRGGIANRGRTILIDNDFVGRVCSSAWSPFQECGVALVRMD 350 >gi|297180096|gb|ADI16320.1| glycine cleavage system t protein (aminomethyltransferase) [uncultured bacterium HF0070_11A08] Length = 388 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 107/298 (35%), Gaps = 60/298 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G+ A+PFL+ +++ + T+ + TP G I + ++ K+ + F Sbjct: 74 IEISGRDAVPFLEKVLSRRISTMEEGRGYYALACTPSGGIFMDGVVFKLGTNRFWYVQAD 133 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----FSNSSFIDE--------- 118 ++ + L + +V I+ P + V+ ++ IDE Sbjct: 134 GPFETWLMALS---VGFDVEIK-DPKSRVLQIQGPASIAIMNAASGGAIDETMRYFRSGY 189 Query: 119 -----------RFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147 R + L + EK + + L Sbjct: 190 FDLGGQSLYVSRTGFTNELGFEIYCDGEKTNH-LALWDHLMASGEPHGMEFSSTRALTIR 248 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI GI+ TD +++ P +A + + L K +IG++ + R++ + Sbjct: 249 RIEGGILGNTTDM-DASMTPFEAGLGAF--VDLEKDDFIGRDALIDADRRSL----LFGL 301 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261 T ++ P SGS IL + +G + V + AR + + + MAL + Sbjct: 302 TCSEATPSSGSEILDGQVVVGHITAGVPSPTLGLGIGYARFAEPGEWVCRAMALRLPD 359 >gi|254000172|ref|YP_003052235.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. SIP3-4] gi|253986851|gb|ACT51708.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. SIP3-4] Length = 371 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 82/272 (30%), Gaps = 47/272 (17%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +KV G A + ++ D+ L + +A + G + ++ + F L Sbjct: 57 IVKVSGPDAEAVIDQLVARDITKLEPGCSLLAAEVDETGALCDDIMVIRDSATDFRLSHG 116 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------------------PINGVVLSWNQE 107 K + L K +V +E + G+ + Sbjct: 117 SGKTPEQLKLLSAGK---SVKVEPDLDVHILSLQGPLSLDILAPHLSFDLAGLPYFRHVP 173 Query: 108 HTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRIN 150 + + R + + + I + + RI Sbjct: 174 TVLFGKNIVIARGGYSGERGYEVYCTAADAVFLWDKILEVGAPFGAIPASWNSLELTRIE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISL-TKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 ++ + P + M G+ L KG YIG+ V +++ R +R +I Sbjct: 234 AALLFFPFEMPEGDTTPWEVNMGW--GVDLDKKGDYIGKAAVLKLKGRERVRH-VGLICR 290 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + +G+ + D EIG + + L + Sbjct: 291 SASAMEAGAKLFKDGKEIGVITSASYSRYLML 322 >gi|163756054|ref|ZP_02163170.1| aminomethyltransferase [Kordia algicida OT-1] gi|161323928|gb|EDP95261.1| aminomethyltransferase [Kordia algicida OT-1] Length = 360 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 100/315 (31%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + T D L A+ S + G I+ +I ++ E+ +I Sbjct: 49 SHMGEFVISGPNALALIQKVTTNDASKLKDGKAQYSCMPNNDGGIVDDLIIYRVNEEKYI 108 Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NVIIEIQPINGVVLSWNQEH 108 L ++ S + + + Y L + + +Q + V L+ + + Sbjct: 109 LVVNASNIEKDWNWISSHNDVGAEMRDVSDEYSLLAIQGPKAVEAMQSLTEVDLTNIKYY 168 Query: 109 TFSNSSFIDERFSIADVLLHRTWG------HNEKIAS-----------------DIKTYH 145 TF + F I + G NE +A + Sbjct: 169 TFQIAKFAGVENVIVSATGYTGSGGFEIYCKNEDVAEVWEKVFEAGESFGIKPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK ++ +E + + RK Sbjct: 229 TLRLEMGYCLYGNDI-DETTSPIEAGLGWI--TKFTKD-FVNREQIEDQKRLGTTRKLVA 284 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G I+ ++G + L D+ + + Sbjct: 285 FEMQDRGIPRQGYDIVDGNGNKLGMVTSGTMSPSMRIGIGLGYVPTVFADYGSNIYIQIR 344 Query: 259 VHGVRVKASFPHWYK 273 + V K +YK Sbjct: 345 KNRVPAKVVKLPFYK 359 >gi|89893125|ref|YP_516612.1| hypothetical protein DSY0379 [Desulfitobacterium hafniense Y51] gi|89332573|dbj|BAE82168.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 469 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 V G A+ FL +I D L K R + I QG++L ++ +I ED + Sbjct: 76 VVGPDAVKFLNSICVNDFTNLTTKGLRHAVICNDQGQVLTDGVVIRIGEDRY 127 >gi|15836788|ref|NP_297476.1| glycine cleavage system aminomethyltransferase T [Xylella fastidiosa 9a5c] gi|11132409|sp|Q9PGW5|GCST_XYLFA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|9104982|gb|AAF82996.1|AE003872_7 glycine cleavage T protein [Xylella fastidiosa 9a5c] Length = 368 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 ++ + R+ + + NV +E + ++ ++ + E Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169 Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146 RF+ +V H RT E I ++ Sbjct: 170 KLGRFAALEVASHSKKILFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT E G + KA+ AR+ + + + Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345 Query: 261 GVRVKASF 268 + V+ Sbjct: 346 EIPVRVVR 353 >gi|219666388|ref|YP_002456823.1| glycine cleavage T protein (aminomethyl transferase) [Desulfitobacterium hafniense DCB-2] gi|219536648|gb|ACL18387.1| glycine cleavage T protein (aminomethyl transferase) [Desulfitobacterium hafniense DCB-2] Length = 469 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 V G A+ FL +I D L K R + I QG++L ++ +I ED + Sbjct: 76 VVGPDAVKFLNSICVNDFTNLTTKGLRHAVICNDQGQVLTDGVVIRIGEDRY 127 >gi|86360680|ref|YP_472568.1| aminomethyltransferase protein [Rhizobium etli CFN 42] gi|86284782|gb|ABC93841.1| probable aminomethyltransferase protein [Rhizobium etli CFN 42] Length = 789 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 97/297 (32%), Gaps = 56/297 (18%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + LS +V G A LQ +T DV L SA+ G ++ + ++ Sbjct: 455 AIIDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMMDDGTLFRLG 514 Query: 62 E-----------DTFILEIDRSKR------DSLIDKLLFYKL---RSNVIIE-------- 93 + L K+ S D+L L RS I++ Sbjct: 515 DKNFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQLHNIALQGPRSRDILKGIIWTAPR 574 Query: 94 ---IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139 I + + + F + + R L + + H + + Sbjct: 575 QPAIGELEWFRFTVGRMGGFEGAPVVISRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +RI G++ + +F T P +A + + + +IG+E + R Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693 Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + R + + ++ G I ++G + K +A+ARID Sbjct: 694 --RKEHPRHLLVGLDIKANESVGHGDCIHIGRAQVGVVTSATRSPVLGKTIALARID 748 >gi|150397399|ref|YP_001327866.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] gi|150028914|gb|ABR61031.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419] Length = 815 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 55/316 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++ G+ A +L +IT V + +G+IL + IEED F Sbjct: 496 LPGFSRFRLKGEGAREWLSGLITGRVPK--PGRIGLAYFADSKGRILTEMSVMAIEEDFF 553 Query: 66 ILEIDRSKRDSLIDKLLFYK-LRSNVIIEI-----------QPINGVVLSWNQEHTFSNS 113 L + + + L ++ + + ++ P + +L+ + + Sbjct: 554 FLITAATAQWHDFEWLRKHRPVDAAFTLDDVTANFSCQILTGPKSRAILAEVCDADLAKG 613 Query: 114 SFIDE------------RFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144 + R S A L + + ++ Sbjct: 614 WLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKIDDTPAIFDAVWEAGQKHGLRPFGMEAL 673 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LRI G D ++ + +K + G+ + R + + + R+ Sbjct: 674 DSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWSKPDFKGKAALEREKQQGVTRRFV 730 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257 + + P S + + +G AL + R D + + + Sbjct: 731 TLTVEAEACDAPYMSTLWSGGEVVGETTSGNWGYRTGRSIALGMLRADLAVPGREVEVEI 790 Query: 258 TVH--GVRVKASFPHW 271 V+ P W Sbjct: 791 FGDRFKAVVQPDQPLW 806 >gi|114331928|ref|YP_748150.1| glycine cleavage system aminomethyltransferase T [Nitrosomonas eutropha C91] gi|122313350|sp|Q0AEP7|GCST_NITEC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|114308942|gb|ABI60185.1| aminomethyltransferase [Nitrosomonas eutropha C91] Length = 363 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G++ FL+ ++ ++ L A + +L P G I+ +I + E F L ++ Sbjct: 55 VDLHGENVRQFLRGLVANNIDKLTVPGKALYTCMLNPAGGIIDDLIIYFLSESWFRLVVN 114 Query: 71 RSKRDSLIDKLLF 83 D ID + Sbjct: 115 AGTADKDIDWITL 127 >gi|54293079|ref|YP_125494.1| glycine cleavage system aminomethyltransferase T [Legionella pneumophila str. Lens] gi|61213294|sp|Q5X0A4|GCST_LEGPL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|53752911|emb|CAH14347.1| hypothetical protein lpl0117 [Legionella pneumophila str. Lens] gi|307608862|emb|CBW98260.1| hypothetical protein LPW_01181 [Legionella pneumophila 130b] Length = 360 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 53/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118 + ++ + R + + + R+ V ++ + ++ S + Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164 Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144 F DV L + + Sbjct: 165 VDAVSTLTPFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLNAGVTPCGLGAR 224 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G++ D T P ++ + +IG + + + I RK Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLTWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260 + + G ++ + G + +++A+AR+ V+ + + + Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342 Query: 261 GVRVKASFPHWYK 273 + K P + K Sbjct: 343 LIPAKVGKPRFIK 355 >gi|166368635|ref|YP_001660908.1| glycine cleavage system aminomethyltransferase T [Microcystis aeruginosa NIES-843] gi|166091008|dbj|BAG05716.1| aminomethyltransferase [Microcystis aeruginosa NIES-843] Length = 368 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 100/307 (32%), Gaps = 51/307 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + + LQ ++ +++ L A+ S +L P G I+ + E + Sbjct: 58 SHMGKFILTGDNLVQSLQTLVPSNLARLSAGKAQYSVLLNPDGGIIDDIIFYYQSESQGV 117 Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERF- 120 L ++ S D ++ L S V ++ V+++ + S + E+ Sbjct: 118 LIVNASTTDKDREWILGNLEG----SGVKLKDLSQERVLIALQGPKAATILQSLVGEKLS 173 Query: 121 -----------------------------------SIADVLLHRTWGHNEKIASDIKTYH 145 L + + + Sbjct: 174 DFGLFNHWESQLFGEKVFIARTGYTGEDGFEIMAPPEIGQRLWTEFLNLGVTPCGLGARD 233 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + D ST P +A ++ L + KG +IG+ V+ + + R+ Sbjct: 234 TLRLEAALALYGQDIDDSTS-PLEAGLNWLVHLP-EKGDFIGRNVLEDQKLNGVNRRLVG 291 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 + + P++ +G + A+A+A + AI + + + + G Sbjct: 292 LQMSGKHIARHDYPVVFAGEVVGKVTSGTLSPTLNTAIALAYLPTPFAAIGQAIEVEIRG 351 Query: 262 VRVKASF 268 A+ Sbjct: 352 TTYPATV 358 >gi|308808814|ref|XP_003081717.1| unnamed protein product [Ostreococcus tauri] gi|116060183|emb|CAL56242.1| unnamed protein product [Ostreococcus tauri] Length = 421 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 48/267 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK A FL++++ AD+ L S + +G I+ +I+KI + + + ++ Sbjct: 102 SIRGKDATAFLESLVVADLKGLKNGTGTLSVMTNEKGGIIDDTVITKINDHDYYVVLNAG 161 Query: 73 KRDSLIDKLLFYKLRSNV----------------------------IIEIQPINGVVLSW 104 + + + ++ ++ + Sbjct: 162 CAEKDQKHINAHLAKAKANGMDVDFIVHSNRSLLAFQGPKTMEVLQRFTDFDLSKLYFGM 221 Query: 105 NQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYHELRIN 150 E T + R L G E + + LR+ Sbjct: 222 FTEMTVNGGKVWVTRTGYTGEDGFEISVPNEDAVKLAEALEGQPEVRFAALGPRDSLRLE 281 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR-IQHRNIIRKRPMIIT 208 G+ D I P +A + G + + C ++G E++ + +++ I +R + +T Sbjct: 282 AGLCLYGNDL-NEDITPPEAGLTWTIGKARREKCDFVGGEIIKKQLENPASIPQRRVGLT 340 Query: 209 GTDDLPPSGSP---ILTDDIEIGTLGV 232 T P+ + D IG + Sbjct: 341 FTGKGAPARQHSIILDMDGNTIGEVTS 367 >gi|255326831|ref|ZP_05367907.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296] gi|255296048|gb|EET75389.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296] Length = 372 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 103/289 (35%), Gaps = 62/289 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ +V G A FL A+++ + L A+ S ++ +G ++ + ++ ++ Sbjct: 50 LSHMGEFRVTGPDAGAFLDYALVSN-MSILKVGKAKYSILVNDKGGVIDDLITYRLGDEE 108 Query: 65 FILEIDRSKRD----------------------------------------------SLI 78 F++ + S D + Sbjct: 109 FMVVPNASNIDTDFAAMSERLGDFNVEFVNESEQTSLVAVQGPRAEEILLAAGVSDEEAV 168 Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-- 136 +L +Y ++V + + ++ ++ F+ ++ L + E Sbjct: 169 RELKYY---ASVPLTVAGVDVLLARTGYTGEDGFELFVPNENAV--ELWDKLAAAGEPFG 223 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSR 193 I + + + LR+ G+ + I P ++ + L I+L K ++G+E ++ Sbjct: 224 MIPAGLASRDSLRLEAGMPLYGHELGLE-ITPFESGLGRLVEIALEKKAADFVGREALTE 282 Query: 194 IQHRNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVVGKKALA 240 + ++ ++ + + P +GS ++ + EIG + + L Sbjct: 283 L-AKSESKRILVGLKAQAKRPARAGSKLVDAEGNEIGEVTSGIPSPTLG 330 >gi|229269505|ref|YP_136128.2| glycine cleavage system aminomethyltransferase T [Haloarcula marismortui ATCC 43049] gi|59797656|sp|Q5V230|GCST_HALMA RecName: Full=Probable aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 363 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63 S+ I V G A Q + T DV L A+ AI G +L ++ ++ E D Sbjct: 51 SHMGQITVAGPDAATLTQRLTTNDVTVLDPGEAQYGAITDEDGIMLDDTVVYRLPEGAAD 110 Query: 64 TFI 66 F+ Sbjct: 111 EFL 113 >gi|55231003|gb|AAV46422.1| probable aminomethyltransferase [Haloarcula marismortui ATCC 43049] Length = 384 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63 S+ I V G A Q + T DV L A+ AI G +L ++ ++ E D Sbjct: 72 SHMGQITVAGPDAATLTQRLTTNDVTVLDPGEAQYGAITDEDGIMLDDTVVYRLPEGAAD 131 Query: 64 TFI 66 F+ Sbjct: 132 EFL 134 >gi|328543569|ref|YP_004303678.1| sarcosine oxidase alpha subunit transmembrane protein [polymorphum gilvum SL003B-26A1] gi|326413313|gb|ADZ70376.1| Putative sarcosine oxidase alpha subunit transmembrane protein [Polymorphum gilvum SL003B-26A1] Length = 1006 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 90/325 (27%), Gaps = 65/325 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL+ + T L R + +L G ++ ++ ++ +D F Sbjct: 673 STLGKIEVVGPDAATFLERMYTNPFKGLKPGRCRYALMLNEAGFVIDDGVVGRLADDRFH 732 Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106 + + + Y+ +V I V++ Sbjct: 733 VTTTTGGAARVFAAMEDYRQTEWPDLDVWITSTTEQWAVIAVQGPLARETIAPFVAGIDL 792 Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146 + S RFS L R E + Sbjct: 793 APDALPHMSVAAGRFSGLPCRLFRVSFTGELGFEVNVPARHGAAVWDALCHAAERRGGCA 852 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G + + T+ P D ++ I K ++G+ ++R Sbjct: 853 YGTEAMHVLRAEKGYIIVGQE-TDGTVTPADLGLEW--AIGKAKPDFVGKRSLARPDLAA 909 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIEI------GTLGVVV------GKKALAIARI 244 RK+ + + D G+ + + G + ALA+ Sbjct: 910 AGRKQLVGLLTEDPARVLEEGAQVTLEAEPARGTPARGHVTSAYWSPAAGRSIALALVED 969 Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269 + + + +RV+ P Sbjct: 970 GRARTGETLHVPMPAGALRVRVVEP 994 >gi|254461511|ref|ZP_05074927.1| glycine cleavage system T protein [Rhodobacterales bacterium HTCC2083] gi|206678100|gb|EDZ42587.1| glycine cleavage system T protein [Rhodobacteraceae bacterium HTCC2083] Length = 371 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 94/317 (29%), Gaps = 63/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +KV G A L+ +I D+ L R + QG I+ +++ D Sbjct: 53 SHMGQVKVSGAMAAAALETLIPVDIEGLAENRQRYGMLTNEQGGIMDDLMLANRG-DHIF 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----NGVVLSWNQEHTFSNSSFIDERFS 121 + ++ + + + I + +E + I + +L+ + + S +D R + Sbjct: 112 VVVNAACKGADIAHM-------KAHLEPEVIVTEIADRALLALQGPASEAVLSTLDPRAA 164 Query: 122 IADVLLHRTW-------------------------------------GHNEKIASDIKTY 144 + T H + A + Sbjct: 165 DMTFMDVATLDLNGAECWVSRSGYTGEDGYEISVPNADAVALAEALLAHEDVEAIGLGAR 224 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D ST AL + + + G + G +++S Sbjct: 225 DSLRLEGGLCLYGHDIDTSTTPVEGALTWAIQKVRRSGNARAGGFPGADIISVQMENGAP 284 Query: 201 RKRPMIITGTDDLPPSGSPILT---DDIEIGTLGV------VVGKKALAIARIDKVDHAI 251 RKR ++ G + IGT+ V G A+ + D Sbjct: 285 RKRVGLLPEGRAPMREGVELFATSEGGTSIGTITSGGFGPTVAGPVAMGLISADHSKLGA 344 Query: 252 KKGMALTVHGVRVKASF 268 L + + + Sbjct: 345 TIYGELRGKRLPLTITK 361 >gi|88812452|ref|ZP_01127701.1| aminomethyltransferase [Nitrococcus mobilis Nb-231] gi|88790238|gb|EAR21356.1| aminomethyltransferase [Nitrococcus mobilis Nb-231] Length = 361 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + +++ G A L+ ++ DV L A + +L QG +L ++ + E + Sbjct: 50 SHMAIVEITGARAQECLRHLLANDVAKLKEPGKALYTCLLNEQGGVLDDLIVYYLAEGRY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 ++ + RD + + R V +E + ++ + Sbjct: 110 RTVVNAATRDKDLSWIKIQGERFQVQVEYRADLAMLAVQGPQA 152 >gi|282900933|ref|ZP_06308866.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii CS-505] gi|281194024|gb|EFA68988.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii CS-505] Length = 383 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 100/319 (31%), Gaps = 76/319 (23%) Query: 21 PF-LQA---------IITADVLTLPYKIARGSAILTPQ-------------GKILLYFLI 57 F LQ ++ +D+ L ++ + +L PQ GK Sbjct: 68 KFNLQGKNLMAQLEKLVPSDLRRLQPGQSQYTVLLNPQGGIIDDIIIYRQSGK------- 120 Query: 58 SKIEEDTFILEIDRSKRDSLIDKL---------LFYKL-RSNVIIEIQPINGVVL----S 103 + + ++ ++ S D + L F L R ++I +Q + Sbjct: 121 -NTDNEKVVIIVNASTTDKDRNWLSQNLDLNQIQFEDLSRDKILIALQGPKATAILQSFV 179 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY------------ 144 + ++ L RT E + ++ + Sbjct: 180 ADDLTPIKAFGHLETEILGGVAFLARTGYTGEDGFEIMVDSQTGLEFWQRLHGAGVTPCG 239 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ + D +T P +A + L + KG +IG++++ R + + + Sbjct: 240 LGCRDTLRLEAAMSLYGQDIDDNTT-PLEAGLAWLVHLD-RKGDFIGRDILERQKIQGVE 297 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254 RK + T ++P G +L+ IG + ALA + + + Sbjct: 298 RKLVGLQTQGRNIPRHGYSLLSSGKIIGQVTSGTLSPTLNYPIALAYVTAELANIKQQIE 357 Query: 255 MALTVHGVRVKASFPHWYK 273 + + + +YK Sbjct: 358 VDIRGKTYPAQVVKRPFYK 376 >gi|241666511|ref|YP_002984595.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861968|gb|ACS59633.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 789 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 100/312 (32%), Gaps = 62/312 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516 Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96 F + + ++ L K R II P Sbjct: 517 NFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139 + + + F + + R L + + H + + Sbjct: 575 QPTIGELEWFRFTVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +RI G++ + +F T P +A + + + +IG+E + R Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693 Query: 194 IQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVD 248 + R + + +++ G I ++G + K +A+ARID V Sbjct: 694 --RKEHPRHLLVGLDIKSNEAVGHGDCIHIGRAQVGVVTSATRSPVLGKTIALARID-VM 750 Query: 249 HAIKKGMALTVH 260 HA G + V Sbjct: 751 HA-NPGTEVEVG 761 >gi|313619092|gb|EFR90895.1| glycine cleavage system T protein [Listeria innocua FSL S4-378] Length = 257 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111 Query: 67 LEIDRSKRD 75 L ++ + + Sbjct: 112 LVVNAANTE 120 >gi|295097442|emb|CBK86532.1| aminomethyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 347 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 2/115 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119 L ++ + R+ + + + + I ++ ++ + S F DE+ Sbjct: 93 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAASLFSDEQ 147 >gi|227833538|ref|YP_002835245.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC 700975] gi|262184528|ref|ZP_06043949.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC 700975] gi|254797869|sp|C3PHK3|GCST_CORA7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|227454554|gb|ACP33307.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC 700975] Length = 370 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 104/307 (33%), Gaps = 59/307 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A FL +++ TL A+ S I G I+ + ++EE F Sbjct: 51 LSHMGEIWVNGPDAAEFLSYCFISNLTTLKEGKAKYSMICAEDGGIIDDLITYRLEETKF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS----------N 112 ++ + D++ D L R+ +V ++ + + +++ Sbjct: 111 LVVPNAGNADTVWDALNE---RAEGFDVDLKNESRDVAMIAVQGPKALEILVPLVEDTKQ 167 Query: 113 SSFID-ERFSIADVLLHRTWGHN------------------------EKIASDIKTY--- 144 + +D ++ + R + E++ + Y Sbjct: 168 QAVMDLPYYAAMTGKVARKYAFICRTGYTGEDGFELIVYNSDAPELWEELLKAGEEYGIK 227 Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G+ + I P +A M + + ++G EV+ + Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELTRD-ITPVEAGMSR--AFAKKEQDFVGAEVLRQRAEE 284 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 +++ +GS + + ++GT+ L A+A ID ++ Sbjct: 285 GPQAVITGLVSSQRRAARAGSEVYVGENKVGTVTSGQPSPTLGHPVALALIDTAAG-LEP 343 Query: 254 GMALTVH 260 G A+ V Sbjct: 344 GAAVEVD 350 >gi|254497300|ref|ZP_05110108.1| glycine cleavage system aminomethyltransferase T [Legionella drancourtii LLAP12] gi|254353528|gb|EET12255.1| glycine cleavage system aminomethyltransferase T [Legionella drancourtii LLAP12] Length = 360 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 105/304 (34%), Gaps = 43/304 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++T DV L + A S + G I+ ++ + D + Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQLEHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109 Query: 66 ILEIDRSKRDS---------------LIDK--LLFYKLR-----SN--VIIEIQPINGVV 101 + ++ + R++ L ++ L ++ S ++ I+ V Sbjct: 110 RIILNSATRETDLVWIHQMSEGFAVGLQERTELAMIAVQGPNAISKTLAVLNPAQIDAVS 169 Query: 102 LSWN------QEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 N ++ F+ + + E V L + + LR+ Sbjct: 170 TLTNFECVDVEQWFFARTGYTGEEGFEIIVPQEQAVQLWTDLKNAGVHPCGLAARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G++ D ST P ++ + T +IG + + + + K + Sbjct: 230 EAGMLLYGQDMDTSTS-PLESGLAWTIKWEPTDRNFIGMGALFSQKQQGLKHKLVGLTLM 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVK 265 + +G ++ G + +++A+AR+ ++ + +A+ V K Sbjct: 289 DKGIMRNGQRVVVAGYADGVITSGSYSPTLEQSIALARV-PLETGAEVLVAIRDKLVPAK 347 Query: 266 ASFP 269 P Sbjct: 348 VGKP 351 >gi|254486836|ref|ZP_05100041.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101] gi|214043705|gb|EEB84343.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101] Length = 1005 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + S I V G A FL + T + +L R + + G ++ ++++I Sbjct: 666 MGLLDASTLGKIIVKGPDAGKFLDMLYTNMMSSLKPGKCRYGLMCSENGFLIDDGVVARI 725 Query: 61 EEDTFILEIDRSKRDSLIDKL 81 ++DTF+ D + + Sbjct: 726 DDDTFLCHTTTGGADRIHQHM 746 >gi|260599246|ref|YP_003211817.1| glycine cleavage system aminomethyltransferase T [Cronobacter turicensis z3032] gi|260218423|emb|CBA33523.1| Aminomethyltransferase [Cronobacter turicensis z3032] Length = 365 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + V + ++ ++ ++ Sbjct: 110 RLVVNSATREKDLAWINEHAEPYGVSVTVRDDLSLIAVQGPNAKAKAATL 159 >gi|300789813|ref|YP_003770104.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32] gi|299799327|gb|ADJ49702.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32] Length = 683 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 98/274 (35%), Gaps = 55/274 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 + V G A+PFLQA+ T+D+ P + +L G + ++++ ++ F + Sbjct: 399 LAVTGPGALPFLQAMTTSDLAAAP-GTVTTTLLLGEDGGVRGRLTVARLGDERFHVGAGG 457 Query: 68 EIDRSKRDSLIDKLLFYKLRSN--VIIEIQ-----------PINGVVLSW-------NQE 107 +D L + L + V I P+ G VL +E Sbjct: 458 RVD-------FAWLRRH-LPRDGTVQIHETTSGTCCLGLWGPLAGEVLPGLSTTDLSAEE 509 Query: 108 HTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASDIKTYHEL---RINHGIV 154 + + R S R W + + L R+ G+ Sbjct: 510 TYAGDVPIVALRLSTVGEPGWELHTTADFGRRLWDTLRDRGVAVAGHQALAGLRLEAGVT 569 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 P DF P++A +D + + L KG ++G++ ++ + + +R +T T + Sbjct: 570 TPGVDFTTEHD-PYEAGLD--SAVRLDKGYFLGRDALA-GRSAATVSRRLTRLT-TGAVV 624 Query: 215 PSGSPILTDDIEIGTLGVV----VGKKALAIARI 244 SG P+ D G + +A+A + Sbjct: 625 GSGDPVYIDGRPAGYVTSAGYGHTAGRAIAYGWL 658 >gi|269128043|ref|YP_003301413.1| glycine cleavage system T protein [Thermomonospora curvata DSM 43183] gi|268313001|gb|ACY99375.1| glycine cleavage system T protein [Thermomonospora curvata DSM 43183] Length = 369 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 107/316 (33%), Gaps = 66/316 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59 LS+ I V G A QA+ D + T+ AR + + P G +L ++ + Sbjct: 55 LSHMGEIFVQGPQAA---QAL---DYALVGRLSTVKVGRARYTMLCAPDGGVLDDLIVYR 108 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------- 108 + +D F++ + + ++ L + + + +++ H Sbjct: 109 LADDRFLVVANAANVATVHRALTERAASFQAEVADRSDDYALIALQGPHSQRILSRFTDV 168 Query: 109 --------TFSNSSFIDERFSIADV-------------------LLHRTWGHNEKIASDI 141 ++ + IA L G + + + Sbjct: 169 PLAEVKYYAWAEGAVAGVPALIARTGYTGEDGFELFVAAGDAVRLWRELAGAEGVLPAGL 228 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200 LR+ G+ + T P++A + + + L K G ++G++ ++ Sbjct: 229 AARDTLRLEAGMPLYGNELTAETT-PYEAGLGRV--VKLDKPGDFVGKKALAAYADTPAG 285 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA--------LAIARIDKVDHAIK 252 R+ ++ P G ++ D G + VV A +A+A +D+ A+ Sbjct: 286 RRLVGLVARGRRAPRKGYQVVRADD--GAVCGVVTSGAPSPTLGRPIAMAYVDR--GAVG 341 Query: 253 KGMALTVHGVRVKASF 268 +A+ V G R + Sbjct: 342 AELAVDVRGRRERVDV 357 >gi|59797837|sp|Q7NFJ5|GCST_GLOVI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 359 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 97/307 (31%), Gaps = 54/307 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + +Q ++ +D+ L A+ + +L Q I+ + + ++ Sbjct: 52 SHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWV 111 Query: 67 LEID-----------------------------------------RSKRDSLIDKLLFYK 85 + ++ + D + +L ++ Sbjct: 112 VIVNGATNDKDRRWLAEHLQGVHFDDLTGTHTLLALQGPAAVETLQPLVDIDLARLGRFE 171 Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + V + +P + E F S E + L ++ + Sbjct: 172 -HAQVSLAGKPAFLARTGYTGEDGFEIMSLEPE-----GIALWQSLTAAGVPPCGLGARD 225 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + D + P +A + + I K Y G+E++ + + R+ Sbjct: 226 TLRLEAAMHLYGQDM-DESTTPLEASLGWV--IDWDKPDYFGREILLAQKAQGTERRLVG 282 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 + + G + + ++G + + +A+A + K I + + + G Sbjct: 283 LTVEGRQIARHGYGLFDGEQQVGVVTSGTLTPTVDRPIALAYVGKPFAPIGSRLEVDIRG 342 Query: 262 VRVKASF 268 R A+ Sbjct: 343 RRAMATV 349 >gi|37523099|ref|NP_926476.1| glycine cleavage system protein T [Gloeobacter violaceus PCC 7421] gi|35214102|dbj|BAC91471.1| glycine cleavage system protein T [Gloeobacter violaceus PCC 7421] Length = 367 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 97/307 (31%), Gaps = 54/307 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + +Q ++ +D+ L A+ + +L Q I+ + + ++ Sbjct: 60 SHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWV 119 Query: 67 LEID-----------------------------------------RSKRDSLIDKLLFYK 85 + ++ + D + +L ++ Sbjct: 120 VIVNGATNDKDRRWLAEHLQGVHFDDLTGTHTLLALQGPAAVETLQPLVDIDLARLGRFE 179 Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + V + +P + E F S E + L ++ + Sbjct: 180 -HAQVSLAGKPAFLARTGYTGEDGFEIMSLEPE-----GIALWQSLTAAGVPPCGLGARD 233 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ + D + P +A + + I K Y G+E++ + + R+ Sbjct: 234 TLRLEAAMHLYGQDM-DESTTPLEASLGWV--IDWDKPDYFGREILLAQKAQGTERRLVG 290 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 + + G + + ++G + + +A+A + K I + + + G Sbjct: 291 LTVEGRQIARHGYGLFDGEQQVGVVTSGTLTPTVDRPIALAYVGKPFAPIGSRLEVDIRG 350 Query: 262 VRVKASF 268 R A+ Sbjct: 351 RRAMATV 357 >gi|296119723|ref|ZP_06838277.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM 20306] gi|295966877|gb|EFG80148.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM 20306] Length = 367 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 105/307 (34%), Gaps = 62/307 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A PFL A+I+ + TL A+ S I+ G I+ + + + Sbjct: 51 LSHMGEIWVNGPDAAPFLSYALISN-MDTLKNGKAKYSMIVAEDGGIIDDLISYRFSDTK 109 Query: 65 FILEIDRSKRDSLIDKLL------------------FYKLR---------------SNVI 91 F++ + D++ + L+ S Sbjct: 110 FLVVPNAGNTDAVWEAFNQRTEGFDVELNNESLDVAMIALQGPDAAKILVEQVADESKDE 169 Query: 92 IEIQPINGVVLS--WNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIK 142 ++ P ++ + + + + E + A + + Sbjct: 170 VDNLPYYAATMAKVAGIDTIVARTGYTGEDGFELMIYNADATAMWQTFAAVEGVTPCGLA 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSRIQHRNII 200 + LR+ G+ + + I P +A M G++ K ++G EV+ R + Sbjct: 230 SRDSLRLEAGMPLYGNELSRA-ITPVEAGM----GVAFRKKTADFVGAEVL-RQRLEEGP 283 Query: 201 RKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253 ++ +T ++ +G+ I D +GT+ ALA+ D +++ Sbjct: 284 KQVIKALTSSERRAARTGAEIYLGDQVVGTVTSGQPSPTLGHPIALALVNTD---ANLEE 340 Query: 254 GMALTVH 260 G A+ V Sbjct: 341 GTAVEVD 347 >gi|167758909|ref|ZP_02431036.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704] gi|167663316|gb|EDS07446.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704] Length = 362 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 54/309 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G+ A+ LQ I+T + + AR S + G + ++ K E+ + Sbjct: 51 SHMGEILCEGEDALANLQMILTNNFDNMKDGQARYSPMCNENGGTVDDLIVYKKAENQYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 + ++ + +D +L ++ L+ Sbjct: 111 IVVNAANKDKDYQWMLAHQ-FGKASFRDVSDQYAQLALQGPKAMEILRKIAKEEDIPKKY 169 Query: 113 -SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 + D + + ++ +T E I + Sbjct: 170 YHAVFDAKAAGIPCIISKTGYTGEDGVELYLDAGLAEKLWDILLEAGKEEGLIPCGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKR 203 LR+ + + + P + + + + K ++G++ ++++ + + RKR Sbjct: 230 DTLRMEAAMPLYGHEM-DDEVTPLETGLGF--AVKMAKEDFVGKDALIAQGEPK---RKR 283 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259 + + + D IG + +A +D + + V Sbjct: 284 IGLKVTGRGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYTEEGTKVEVEV 343 Query: 260 HGVRVKASF 268 G V+A Sbjct: 344 RGRIVEAFV 352 >gi|126736022|ref|ZP_01751766.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. CCS2] gi|126714579|gb|EBA11446.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. CCS2] Length = 1003 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 53/263 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TLP R + T G ++ ++ ++ ED+++ Sbjct: 677 VKGPDAGKFLDMMYTNMMSTLPVGKCRYGLMCTENGFLMDDGVVVRMAEDSWLCHTTTGG 736 Query: 74 RDSLIDKL-----------LFY-------------------KLRSNV------------- 90 +++ + Y KL + Sbjct: 737 AETIHAHMEDWLQCEWWDWKVYVANVTEQYAQIAVVGPNARKLLRKLGGMDVSAEALPFM 796 Query: 91 -----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 I +S++ E ++ + + + D L+ + +T H Sbjct: 797 QWREGKIGDFDARVFRISFSGELSYEIAVPAGQGAAFWDALME-AGEEFGIMPYGTETLH 855 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR G + + T+ P D + +S K Y+G+ R + R + + Sbjct: 856 ILRAEKGFIMIGDE-TDGTVIPQDLNLQW--ALSKKKEDYLGKRAHLRSHMADPNRWKLV 912 Query: 206 II-TGTDDLPPSGSPILTDDIEI 227 + T + P G+ + D Sbjct: 913 GLETVDGSVLPDGAYAIADGDNA 935 >gi|148555606|ref|YP_001263188.1| glycine cleavage system aminomethyltransferase T [Sphingomonas wittichii RW1] gi|148500796|gb|ABQ69050.1| glycine cleavage system T protein [Sphingomonas wittichii RW1] Length = 377 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 95/307 (30%), Gaps = 48/307 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + V G L+A++ D + L R S +L QG IL ++++ D ++ Sbjct: 63 SHMGQLLVSGDGVDTALEALMPGDFVQLGVDRMRYSLLLDDQGGILDDLMVTRRAGDFYL 122 Query: 67 LEIDRSKRDSL------------IDKLLFYKLRS-------NVIIEIQP-INGVVLSWNQ 106 + +K D + ++ L + L + + + I P + + Sbjct: 123 VVNGATKADDIAHLHEHLPEELTLNHLDEHALLALQGPKAVDALARICPGVEMLTFMTAG 182 Query: 107 EHTFSNSSFIDERFSIADVLLHRT--------------WGHNEKIASDIKTYHELRINHG 152 + + R E + LR+ G Sbjct: 183 AFELAGAPVWISRSGYTGEDGFEISLPADAAEAAATLLLAQPEVKPIGLGARDSLRLEAG 242 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMII 207 + D T P A + G ++ K G + G + R RKR +I Sbjct: 243 LPLYGHDLDTDTD-PATAGL----GFAVPKRRRAEGGFPGATRIVRDLREGAPRKRIGLI 297 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263 G+ I D +G + +L A+ + + + + + V G R Sbjct: 298 LAGRLPAREGAAIFDGDTAVGAVSSGGFSPSLQVPIAMGYVLAASAELNRPLQIEVRGKR 357 Query: 264 VKASFPH 270 + A Sbjct: 358 LDAVVAP 364 >gi|205353979|ref|YP_002227780.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858318|ref|YP_002244969.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226697523|sp|B5QXI2|GCST_SALEP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226697524|sp|B5RE16|GCST_SALG2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|205273760|emb|CAR38755.1| Glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710121|emb|CAR34476.1| Glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629092|gb|EGE35435.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 364 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 3/122 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ +I ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123 L ++ + R+ + + + + I ++ ++ + + F DE R ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169 Query: 124 DV 125 + Sbjct: 170 GM 171 >gi|198246130|ref|YP_002217033.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226697522|sp|B5FUG8|GCST_SALDC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|197940646|gb|ACH77979.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624801|gb|EGE31146.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 364 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 3/122 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ +I ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123 L ++ + R+ + + + + I ++ ++ + + F DE R ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169 Query: 124 DV 125 + Sbjct: 170 GM 171 >gi|116255742|ref|YP_771575.1| putative glycine degradation aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115260390|emb|CAK03494.1| putative glycine degradation aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 789 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 60/297 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516 Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVII----- 92 F + + ++ L K R II Sbjct: 517 NFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574 Query: 93 --EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139 +I + + + F + + R L + + H + + Sbjct: 575 QPDIGELEWFRFTVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +RI G++ + +F T P +A + + + +IG+E + R Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDEFIGREALIR 693 Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + R + + ++ G I ++G + K +A+ARID Sbjct: 694 --RKEHPRHLLVGLDIKANEAVGHGDCIHIGRGQVGVITSATRSPILGKTIALARID 748 >gi|72383127|ref|YP_292482.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. NATL2A] gi|123773748|sp|Q46I99|GCST_PROMT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|72002977|gb|AAZ58779.1| Glycine cleavage system T protein [Prochlorococcus marinus str. NATL2A] Length = 372 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ GK+ LQ ++ +DV + A + L G I +I Sbjct: 51 SHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTN 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-VII-EIQPINGVVLSWNQEHTFSNSSFIDER 119 E++ +L I+ ++++S I+ L L + I E P ++ E + ++E Sbjct: 111 EESIVLVINAARKESDIEWLS-SNLFKKEITISEFMPEGALIAIQGPESISTLEKILEEP 169 Query: 120 FSIADVLLHRTWGHNEKI 137 S HRT N + Sbjct: 170 LSNLPRFGHRTITSNPNL 187 >gi|319954423|ref|YP_004165690.1| aminomethyltransferase [Cellulophaga algicola DSM 14237] gi|319423083|gb|ADV50192.1| Aminomethyltransferase [Cellulophaga algicola DSM 14237] Length = 361 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 105/309 (33%), Gaps = 51/309 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +AI +Q + + D L A+ S + G I+ +I +I+E+ ++ Sbjct: 49 SHMGEFLISGPNAISLIQKVSSNDASKLAVGKAQYSCMPNETGGIVDDLIIYQIKEEQYL 108 Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------NVIIEIQPINGVVLSWNQE 107 L ++ S + + + Y +R+ + +Q + V LS + Sbjct: 109 LVVNASNIEKDWNHISKYNKDINADMRNLSEDYSLLAIQGPKAVEAMQSLTSVDLSAIKF 168 Query: 108 HTFSNSSFIDERFSIADVLLH----------------RTWGHNEKIASD-------IKTY 144 +TF + F I + + W + D + Sbjct: 169 YTFEVAPFAGIDNVIISATGYTGSGGFEIYCKNTEVAQIWTKVFEAGKDFGIKPIGLAAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D T P +A + + TK ++ E +++ + RK Sbjct: 229 DTLRLEMGYCLYGNDI-NDTTSPIEAGLGWV--TKFTKD-FVNSENLAKEKAEGSARKLI 284 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 +P I+ + +IG + K + + + K A+ + + + + Sbjct: 285 AFELDERGIPRHDYEIVNANGEKIGIVTSGTMSPSMNKGIGLGYVPKAVSAVGEKIYIQI 344 Query: 260 HGVRVKASF 268 + A+ Sbjct: 345 RKKAIPATI 353 >gi|254455529|ref|ZP_05068958.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp. HTCC7211] gi|207082531|gb|EDZ59957.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp. HTCC7211] Length = 428 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 89/284 (31%), Gaps = 61/284 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A+ LQ I D+ + G I+ L+ +I+E+ + + Sbjct: 105 EISGPDALKLLQRIFPRDISKVKKGRCSYQFACYHDGGIITDGLLLRIDENCYWF----A 160 Query: 73 KRDSLIDKLLFYKLRS---NVIIE----------------------IQPINGVVLSWN-Q 106 + D + L +YK S +V I+ +PI ++ Sbjct: 161 QADGDM--LSWYKANSEGLDVEIKEPNVFVSQIQGPKSMELLDQLIDEPIANTWKYFDWV 218 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------------DIKTYHELR 148 E T +N I R + L + E A ++ R Sbjct: 219 EITMANEKVIISRTGFTNELGWEIYFRPENDAEKLGNLILENGKKMGMIITATPSFRGRR 278 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 I G++ DF + P + + L K +IG++ + R I Sbjct: 279 IEAGLLSAGQDF-SNETNPFSVGLGRF--VDLKKDNFIGKKALLNADKEC----RSWGIR 331 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVD 248 D + G I ++ IG + + I +DK D Sbjct: 332 VVDGIAKKGRYIKINNQSIGKITSSTWSPYQVCGVGIVLLDKSD 375 >gi|166032436|ref|ZP_02235265.1| hypothetical protein DORFOR_02151 [Dorea formicigenerans ATCC 27755] gi|166028159|gb|EDR46916.1| hypothetical protein DORFOR_02151 [Dorea formicigenerans ATCC 27755] Length = 363 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 32/69 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ LQ ++T D + AR S + G + ++ K ++ + Sbjct: 51 SHMGEVLCQGKDALANLQKLLTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRGDNDYF 110 Query: 67 LEIDRSKRD 75 + ++ + +D Sbjct: 111 IVVNAANKD 119 >gi|297559405|ref|YP_003678379.1| glycine cleavage system protein T [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843853|gb|ADH65873.1| glycine cleavage system T protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 372 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 47/278 (16%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I++ G A L A++ + + AR S I G +L ++ ++ ED Sbjct: 57 LSHMGEIRLTGPQAAQALDHALV-GHLSQVKVGRARYSMITAEDGGVLDDLIVYRLREDE 115 Query: 65 FILEIDRSKR----DSLIDKLLFYKL-----------------RS-NVI--IEIQPINGV 100 +++ + + +L ++ + + R+ +V+ + ++G+ Sbjct: 116 YLVVANAANTAVVAPALAERAAGFDVEVRDESAEYALIAVQGPRAVDVLAPLTDADLDGI 175 Query: 101 VLSWNQEHTFSNSSF------------------IDERFSIADVLLHRTWGHNEKIASDIK 142 EHT + +R L + + + + Sbjct: 176 RYYAGYEHTVAGEPVLLARTGYTGEDGFEIFVSPADRAPKVWDALMAEGERHGLVPAGLS 235 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ G+ + + + P DA + + + KG ++G+ + + R+ Sbjct: 236 ARDTLRMEAGMPLYGQELT-ADLTPFDAGLGRV--VKFDKGDFVGRAALEEASRSSRPRR 292 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 ++ G +L D +GT+ L Sbjct: 293 LIGLVARGRRPLRQGQEVLRDGTPVGTITSGAPSPTLG 330 >gi|260575690|ref|ZP_05843687.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2] gi|259022088|gb|EEW25387.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2] Length = 813 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 67/321 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S +V G +L A IT V + +G+I+ I+++ ED Sbjct: 496 LPGFSRFRVKGGHVAAWLGAQITGKVPGV--GRLGLGYFADGKGRIVTEMSIARLAEDEV 553 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------NQEHTF 110 +L + + + L + +E+ + + T Sbjct: 554 LLITAATAQAHDREWLQRH---LAAGLELSDETDAWACQILTGPSSRAILAQVCDADLTR 610 Query: 111 SNSSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHE----------------- 146 ++ R A+VLL R W + ++A + Sbjct: 611 PWLTWQAARIGGAEVLLFRVSFAGELGWEIHSRVADTAAVFDRVMQAGQGHGLRPFGMFA 670 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G D ++ + K + G+ ++R + + ++ Sbjct: 671 LNSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDFAKPAFRGRGALTRERDAGVAKRF 727 Query: 204 PMIITGTDDL-PPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256 ++ D PP S + +G V AL + R D G+A Sbjct: 728 VTLVVQAGDCDPPYMSTLWHGGAVVGETTSADWGHRVAACVALGMLRADLA----VPGVA 783 Query: 257 LTVH------GVRVKASFPHW 271 L V V+A P W Sbjct: 784 LEVEVFGQRYPAVVQADAPLW 804 >gi|283457528|ref|YP_003362111.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18] gi|283133526|dbj|BAI64291.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18] Length = 378 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 104/289 (35%), Gaps = 62/289 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ +V G A FL A+++ + L A+ S ++ +G ++ + ++ ++ Sbjct: 56 LSHMGEFRVTGPDAGAFLDYALVSN-MSILKVGKAKYSILVNDKGGVIDDLITYRLGDEE 114 Query: 65 FI-------LEIDRSKR---------------------------------------DSLI 78 F+ ++ D + + + Sbjct: 115 FMVVPNAANIDTDFAAMSERLGDFNVEFVNESEQTSLVAVQGPRAEEILLVAGVSDEEAV 174 Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-- 136 +L +Y ++V + + ++ ++ F+ ++ L + E Sbjct: 175 RELKYY---ASVPLTVAGVDVLLARTGYTGEDGFELFVPNENAV--ELWDKLAAAGEPFG 229 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSR 193 I + + + LR+ G+ + I P ++ + L I+L K ++G+E ++ Sbjct: 230 MIPAGLASRDSLRLEAGMPLYGNELGLE-ITPFESGLGRLVEIALEKKAANFVGREALTE 288 Query: 194 IQHRNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVVGKKALA 240 + ++ ++ + + P +GS ++ + EIG + + L Sbjct: 289 L-AKSESKRILVGLKAQAKRPARAGSKLVDAEGNEIGEVTSGIPSPTLG 336 >gi|256391033|ref|YP_003112597.1| glycine cleavage system aminomethyltransferase T [Catenulispora acidiphila DSM 44928] gi|256357259|gb|ACU70756.1| glycine cleavage system T protein [Catenulispora acidiphila DSM 44928] Length = 369 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 51/291 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65 S+ V G A F+ +++ D+ + A+ + G ++ + + Sbjct: 56 SHLGKASVTGPGAAAFVNSVLANDLQRIEDGQAQYTLCCDDATGGVVDDLIAYLNGPEDV 115 Query: 66 ILEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 L + + ++ +L ++ + ++ V+ S Sbjct: 116 FLIPNAANTSEVVRRLREAAPEGVTVQNRHRDFGVLAVQGPKSAAVLAELGLPTDHDYMS 175 Query: 115 FIDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HEL 147 F F A + + RT W E + ++ L Sbjct: 176 FTVASFENAPLTVCRTGYTGEHGYELVAPWDKTEALWDALQAAGEEFGIRPCGLGARDTL 235 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G D I P+ A + K + G+EV+ + ++ I Sbjct: 236 RTEMGYPLHGQDLSME-ITPNMARAGW--AVGWKKPAFWGREVLLAEREAG-AKRLLRGI 291 Query: 208 TGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 D P ++ D +IG + LA+ + + Sbjct: 292 RAVDRAIPRAHMVVNDADGKQIGEVTSGTFSPTLREGIGLALLDREYTEGD 342 >gi|329850272|ref|ZP_08265117.1| glycine cleavage system T protein [Asticcacaulis biprosthecum C19] gi|328840587|gb|EGF90158.1| glycine cleavage system T protein [Asticcacaulis biprosthecum C19] Length = 350 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 98/302 (32%), Gaps = 40/302 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A+ L+ + D TL + S +L +G IL +++S+ E + F Sbjct: 33 SHMGQARLTGADAVATLETLTPTDFATLVLGKQKYSLLLNAEGGILDDWMVSRPEGNGFF 92 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQP--------------------IN 98 L ++ + +D + L F L ++ +Q Sbjct: 93 LVVNAACKDQDFEILAENIIGDSHFEVLGDRALLALQGPKAKDVMQSVCPAACELYFMEC 152 Query: 99 GVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151 G Q S S + E +I L H+ + LR+ Sbjct: 153 GSFDLLGQTAFVSRSGYTGEDGFEISVPNAIVGELWDLLLTHDVVKPIGLGARDSLRLEA 212 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ + L + LT+G G + + + + R R I Sbjct: 213 GMPLYGHEMDVGYTLVEANLGFAMQKSRLTRGDIRGIDRIRQQLDGGLDRVRVAIRVLEG 272 Query: 212 DLPPSGSPILT-DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ IL+ D E+G + V +L A+ + A+ + L V G A Sbjct: 273 PPAREGAKILSEDGAELGIVTSGVPSPSLGYSIAMGYVPPASSALGTKLKLEVRGKPYAA 332 Query: 267 SF 268 Sbjct: 333 EI 334 >gi|134142798|gb|ABO61733.1| mitochondrial glycine decarboxylase complex T-protein [Populus tremuloides] Length = 408 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 97/302 (32%), Gaps = 58/302 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK IPFL+ ++ ADV L + +G + +I+K++ D + ++ Sbjct: 91 SLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQNDHMYIVVNAG 150 Query: 73 KRD---------------------------------------SLIDKLLFYKLRSNV--- 90 RD S + L L S + Sbjct: 151 CRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASALQHLTKDDL-SKLYFG 209 Query: 91 IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 I ING + E F S + +A +L ++ G + Sbjct: 210 EFRITDINGAHCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTG--LGARD 267 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D I P +A + G +G ++G EV+ + + R Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILKQLAEG-PKIRL 325 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 + T T P S S I + IG + KK +A+ + H + V Sbjct: 326 VGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGSHKAGTKAKILV 385 Query: 260 HG 261 G Sbjct: 386 RG 387 >gi|189485418|ref|YP_001956359.1| glycine cleavage system T protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287377|dbj|BAG13898.1| glycine cleavage system T protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 354 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 95/291 (32%), Gaps = 54/291 (18%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G++A FL + ++ LP K AR S IL +G I ++ K + +++ Sbjct: 50 HMGTFTVTGENAEKFLNYVTLGNISGLPDKKARYSMILNEEGGIKDDIIVYKFGSE-YMI 108 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 ++ + + L +K+ V I+ + +++ + + E Sbjct: 109 VVNAGNLEKDFNWLSKHKM-EKVEIKNISSDISLIAIQGPKSAEILQSVSETDIKSMKYF 167 Query: 119 ------------------RFSIADVLLHRTWGHNEKIASDIKTY-------------HEL 147 R + +++ + L Sbjct: 168 TVSILKLKDISVDFYRVARTGYTGEDGFEIFISKDQVNKFWEKLMSLSVKPCGLGCRDTL 227 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ + + I P DA + I+ +IG+ + ++ +++ K+ + Sbjct: 228 RLEACMPLHGHEIG-ENINPIDAGFQKI--INWDSD-FIGKNRLLLLKDKSM--KKSIAF 281 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 T + + + I + + ++G + +A+ D ++ Sbjct: 282 ECTSGIARNSNEIFSGNKKVGYVTSGSFSPTLKKAIGIALIDADAGTDELE 332 >gi|116255753|ref|YP_771586.1| putative aminomethyltransferase/glycine cleavage protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260401|emb|CAK03505.1| putative aminomethyltransferase/glycine cleavage protein [Rhizobium leguminosarum bv. viciae 3841] Length = 377 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 73/313 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 + + G AI L +I T D+ + + + +L +G ++ + ++++L Sbjct: 59 VHLVGPHAIAVLDSITTRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNSWMLVHGS 118 Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 D L +D L Y + I + Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ + Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQAPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + D ++G + + +K++AIAR+D VD A+ Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTQKSMAIARLD-VDKAVH- 343 Query: 254 GMALTVHGVRVKA 266 G L V G VKA Sbjct: 344 GTKLEVRGKTVKA 356 >gi|296104568|ref|YP_003614714.1| glycine cleavage system aminomethyltransferase T [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059027|gb|ADF63765.1| glycine cleavage system aminomethyltransferase T [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 347 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 1/127 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + R+ + + + + I ++ ++ ++ + A Sbjct: 93 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFNNEQREATA 152 Query: 126 LLHRTWG 132 + +G Sbjct: 153 GMKPFFG 159 >gi|320582443|gb|EFW96660.1| putative nuclear cohesin complex SMC ATPase [Pichia angusta DL-1] Length = 1518 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G + FLQ + D+ +L + S +L G ++ +I+K +ED+F + + Sbjct: 41 RIKGPNTTSFLQKLCPTDLRSLKPFHSTLSVLLNNNGGVIDDCMITKHDEDSFYIVTNAG 100 Query: 73 KRDSLIDKLL 82 R I+ + Sbjct: 101 CRAKDIEFIK 110 >gi|261334973|emb|CBH17967.1| aminomethyltransferase, putative [Trypanosoma brucei gambiense DAL972] Length = 375 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 114/310 (36%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G FL+ + + LP A + L + + ++++ +D + Sbjct: 54 SHFGVVEVFGADREKFLEWLTPSAPSRLPSGKAALTMFLNDRAGVKDDCIVTRY-DDRLV 112 Query: 67 LEIDRSKRDSLIDKLLFYKL------------RSNVII-----------EIQPINGVVLS 103 + ++ +D +I + R+ V + ++ ++ ++ Sbjct: 113 VVVNAGCKDKMIAYMRQSVADFTGDVALEMEDRAIVTVQGPKAASALAPHVEDLDKLLFM 172 Query: 104 WNQEH---------TFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147 ++ T + S+ E R A ++ + + A+ + L Sbjct: 173 QGRQDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRP 204 R G+ + + M + +T+G ++G E ++++ + + R R Sbjct: 233 RTEAGLNLYSHELSEDIDPVAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRV 292 Query: 205 MIITGT--DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 I+ +P +G+P+L + +G + V + +A+ +D+ I + + L Sbjct: 293 GILAAPERGPIPRNGTPVLVEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLD 352 Query: 259 VHGVRVKASF 268 V G VKA Sbjct: 353 VRGKLVKAEI 362 >gi|262164342|ref|ZP_06032080.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio mimicus VM223] gi|262026722|gb|EEY45389.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio mimicus VM223] Length = 376 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 92/287 (32%), Gaps = 50/287 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + ++ I L + L ++ Sbjct: 80 DIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKEQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVANMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + ++A + + + + + Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEK 364 >gi|241666499|ref|YP_002984583.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861956|gb|ACS59621.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 377 Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 101/314 (32%), Gaps = 73/314 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 + + G AI L +I + D+ + + + +L +G ++ + ++++L Sbjct: 59 VHLVGPHAIAVLDSITSRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNSWMLVHGS 118 Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 D L +D L Y + I + Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ + Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + D ++G + + KK++AIAR+D VD A+ Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 343 Query: 254 GMALTVHGVRVKAS 267 G L V G VKAS Sbjct: 344 GTKLEVRGKTVKAS 357 >gi|269140284|ref|YP_003296985.1| glycine cleavage system aminomethyltransferase T [Edwardsiella tarda EIB202] gi|267985945|gb|ACY85774.1| glycine cleavage system aminomethyltransferase T [Edwardsiella tarda EIB202] gi|304560110|gb|ADM42774.1| Aminomethyltransferase [Edwardsiella tarda FL6-60] Length = 374 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A FL+ ++ DV L A SA+L G ++ ++ + + F Sbjct: 50 SHMTIVDLHGVKARDFLRYLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFLADQHF 109 Query: 66 ILEIDRSKRDSLIDKL 81 L ++ + R+ + + Sbjct: 110 RLVVNSATRERDLAWI 125 >gi|55376916|ref|YP_134767.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula marismortui ATCC 43049] gi|55229641|gb|AAV45061.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula marismortui ATCC 43049] Length = 850 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 90/277 (32%), Gaps = 57/277 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G+ + FLQ + + D+ L R S +L G IL + K++++ F++ Sbjct: 536 IMVEGEGSQAFLQQVCSNDMD-LDTGQVRYSLLLNEGGGILADITVVKLDDEEFMVTTGG 594 Query: 72 SKRDSLI-DKLLFYKLRSNVIIEIQPINGV---VLSWNQ----------EHTFSNSSF-- 115 + L + + + G + W + +N+ F Sbjct: 595 GNSPGIHGGHLED---EAPATVSVHVEEGAKSTIGLWGPNARLLLQRCTDADVTNNGFPY 651 Query: 116 -------------IDERFSIADVLLH----------RTWGHNEKIASDI-------KTYH 145 I R S L R W + D+ Sbjct: 652 FSAKQMYVGDVPVIALRVSYVGELGWELWAPTEYGQRLWETLQDAGEDLGVRPMGGGALS 711 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204 +R+ G TD + P +A + + +IG+E + + + I K P Sbjct: 712 SMRLEKGYRLWGTDIDTDS-NPFEAGLPFAVDMDTE---FIGKEALETAREKGIESKITP 767 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + + + D+ SG P+ D IG + G +I Sbjct: 768 LTLDDSTDIMLSGRPVTKDGDAIGYV--QAGNYGYSI 802 >gi|323349510|gb|EGA83734.1| Gcv1p [Saccharomyces cerevisiae Lalvin QA23] gi|323355796|gb|EGA87610.1| Gcv1p [Saccharomyces cerevisiae VL3] Length = 333 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 5 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 64 Query: 72 SKRD 75 + Sbjct: 65 GCAE 68 >gi|323338337|gb|EGA79565.1| Gcv1p [Saccharomyces cerevisiae Vin13] Length = 361 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 33 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 92 Query: 72 SKRD 75 + Sbjct: 93 GCAE 96 >gi|323334266|gb|EGA75648.1| Gcv1p [Saccharomyces cerevisiae AWRI796] Length = 361 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 33 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 92 Query: 72 SKRD 75 + Sbjct: 93 GCAE 96 >gi|207346849|gb|EDZ73217.1| YDR019Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 400 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 131 Query: 72 SKRD 75 + Sbjct: 132 GCAE 135 >gi|6320222|ref|NP_010302.1| Gcv1p [Saccharomyces cerevisiae S288c] gi|1707880|sp|P48015|GCST_YEAST RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; AltName: Full=Glycine decarboxylase complex subunit T; Flags: Precursor gi|840872|emb|CAA89844.1| Gcv1p [Saccharomyces cerevisiae] gi|1216226|emb|CAA65211.1| glycine cleavage T protein [Saccharomyces cerevisiae] gi|1431446|emb|CAA98840.1| GCV1 [Saccharomyces cerevisiae] gi|151942007|gb|EDN60363.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae YJM789] gi|190405007|gb|EDV08274.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae RM11-1a] gi|256273257|gb|EEU08200.1| Gcv1p [Saccharomyces cerevisiae JAY291] gi|259145264|emb|CAY78528.1| Gcv1p [Saccharomyces cerevisiae EC1118] gi|285811041|tpg|DAA11865.1| TPA: Gcv1p [Saccharomyces cerevisiae S288c] Length = 400 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 131 Query: 72 SKRD 75 + Sbjct: 132 GCAE 135 >gi|253687023|ref|YP_003016213.1| glycine cleavage system T protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259647495|sp|C6D8W9|GCST_PECCP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|251753601|gb|ACT11677.1| glycine cleavage system T protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 371 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + + I + +V + Sbjct: 110 RLVVNSATREKDLAWIEQHAAPFGIEIREREDLALVAVQGPQA 152 >gi|238026645|ref|YP_002910876.1| FAD dependent oxidoreductase [Burkholderia glumae BGR1] gi|237875839|gb|ACR28172.1| FAD dependent oxidoreductase [Burkholderia glumae BGR1] Length = 829 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 57/291 (19%) Query: 3 SVYLSNQSFIK---VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59 +V L ++S + V G+ A LQ+ + DV + S IL +G ++++ Sbjct: 495 AVALFDRSALAKLLVKGRDAESALQSRLANDVA-VAPGSIVRSGILNTRGGYESDVVLAR 553 Query: 60 IEEDTFILEIDRSKRDSLIDKLLF-----------------YKLRS-----------NVI 91 + +D ++L ++ +D L Y L S V Sbjct: 554 LADDRYLLLTGTTQATRDLDLLERHLEAGDRRCVALDVTGQYALFSLIGPHARALLQRVS 613 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHN 134 G +E +++ R +IA Sbjct: 614 RADLRDAGFAAGTCREIELGHATVHALRHAIAGAPGWDLLVPVESAVPVHAALVHAGAAL 673 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 + + LRI +G + P ++ P +A + L +++ + +R Sbjct: 674 GLVQAGEYALESLRIENGQAAWGRELSP-SLDPFEAGLAGLCKLAMPIPFTGSAALAARA 732 Query: 195 QHRNIIRKRPMIITGTDDLPP----SGSPILTDDIEIGTLGVVVGKKALAI 241 + +R ++ + P G IL D +G L L + Sbjct: 733 ---GLPCRRRVVALRVEGRPDVTLWGGEAILRDGAAVGLLSSAGFGHTLGL 780 >gi|282897570|ref|ZP_06305570.1| Glycine cleavage system T protein [Raphidiopsis brookii D9] gi|281197493|gb|EFA72389.1| Glycine cleavage system T protein [Raphidiopsis brookii D9] Length = 368 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 105/319 (32%), Gaps = 76/319 (23%) Query: 21 PF-LQA---------IITADVLTLPYKIARGSAILTPQ-------------GKILLYFLI 57 F LQ ++ +D+ L ++ + +L PQ GK Sbjct: 53 KFTLQGKNLMAELEKLVPSDLSRLEPGQSQYTVLLNPQGGIIDDIIIYCQSGK------- 105 Query: 58 SKIEEDTFILEIDRSKRDSLIDKL---------LFYKL-RSNVIIEIQP--INGVVLSWN 105 + + ++ ++ S D + L F L R ++I +Q G++ S+ Sbjct: 106 -NTDNEKVVIIVNASTTDKDRNWLSQNLDLNQIQFEDLSRDKILIALQGPKATGILQSFV 164 Query: 106 QEHTFSNSSFIDERFSIADVL--LHRTWGHNE-------KIASDIKTY------------ 144 + +F +I L RT E ++ + Sbjct: 165 ADDLTPIKAFGHLETAILGGRAFLARTGYTGEDGFEIMVDSEPGLEFWQSLHGVGVTPCG 224 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ + D +T P +A + L + KG +IG++V+ R + + + Sbjct: 225 LGCRDTLRLEAAMSLYGQDIDDNTT-PLEAGLAWLVHLD-RKGDFIGRDVLERQKIQGLE 282 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254 RK + T ++P G +L+ IG + ALA + + + Sbjct: 283 RKLVGLQTQGRNIPRHGYSVLSSGKIIGQVTSGTLSPTLNYPIALAYVSAELANIKQQLE 342 Query: 255 MALTVHGVRVKASFPHWYK 273 + + + +YK Sbjct: 343 VDIRGKTYPAQVVKRPFYK 361 >gi|153854094|ref|ZP_01995402.1| hypothetical protein DORLON_01393 [Dorea longicatena DSM 13814] gi|149753143|gb|EDM63074.1| hypothetical protein DORLON_01393 [Dorea longicatena DSM 13814] Length = 362 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 95/310 (30%), Gaps = 56/310 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ L I+T D + AR S + G + ++ K ++ + Sbjct: 51 SHMGEVLCEGKDALANLNQILTNDFTNMVDGQARYSPMCNEHGGTVDDLIVYKKSDEHYF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112 + ++ + +D +L ++ V + L+ Sbjct: 111 IVVNAANKDKDYQWMLRHQ-FGEVTFKDVSSGYAQLALQGPKAMQILKKLTAEENIPKKY 169 Query: 113 -SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144 + D + ++ +T E I + Sbjct: 170 YHAVFDTEVAGIPCIISKTGYTGEDGVELYLASEKAEEMWNTLLEAGKEEGLIPCGLGAR 229 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI--IRK 202 LR+ + + I P + + + + K +IG+ S ++ + I++ Sbjct: 230 DTLRMEAAMPLYGHEM-NDDITPLETGLKF--AVKMAKNDFIGK---SALEEKGTPSIKR 283 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 + +TG + + D +IG +A+A +D I + Sbjct: 284 IGLKVTGRG-IIREHQDVYVGDKKIGHTTSGTHCPYLGYPIAMALVDADSVEIGDTVEAD 342 Query: 259 VHGVRVKASF 268 V G RV A Sbjct: 343 VRGRRVAAEV 352 >gi|292493896|ref|YP_003529335.1| glycine cleavage system protein T [Nitrosococcus halophilus Nc4] gi|291582491|gb|ADE16948.1| glycine cleavage system T protein [Nitrosococcus halophilus Nc4] Length = 371 Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 47/281 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G+ PFL+ ++ +V A S IL QG ++ ++ + E F Sbjct: 50 SHMAVIDLKGEKVRPFLRRLLANNVDRSTVPGTALYSCILNEQGGVIDDLIVYFMAEQKF 109 Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV------II--EIQ 95 + + RD + L + R+ V + ++ Sbjct: 110 RIVSNAGTRDKDLTWIETQADPFDVQVEERSDLAMIAVQGPEARTKVHEQLPETLKEKVS 169 Query: 96 PINGVVLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + W E + + + E + + + LR+ Sbjct: 170 SLKRFQAVWEDELFVARTGYTGEDGYELLLPGAKAQDWWQRLVASGVTPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ TD T P ++ + T+ +IG++ + Q R+ ++ Sbjct: 230 EAGMCLYGTDM-DETTTPLESGLGWTVAWEPTERDFIGRDALEAQQAAGCPRQLVGLLLQ 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARI 244 L +G ++T +G + G +++A+AR+ Sbjct: 289 GKGLMRNGQRVVT---PVGEGVITSGGFSPSLERSIALARV 326 >gi|71083990|ref|YP_266710.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] gi|71063103|gb|AAZ22106.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] Length = 775 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 58/297 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS ++ G A +Q +T +V L +A+ G +L + K+ + Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSIGQVVYTAMCYENGCMLDDGTLFKLGQ 501 Query: 63 DTF-ILEIDRSKRDSLIDKLLF--YKLRSN--------------------------VIIE 93 D F + D + L ++ YK+ I+ Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKNYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTAPIQ 561 Query: 94 IQPINGVVLSWNQEHTF--SNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139 +N + + + R L + W H + A Sbjct: 562 PSITELEWFRFNIARIDHETGTPIVISRTGYTGELGYEIWCHPKDAAEVWDKVWEAGKEF 621 Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 ++ +RI G++ +F T P +A + + + +IG+E + I Sbjct: 622 DITPLGLEALDMVRIEAGLIFYGYEFDDQTD-PFEAGIGFTVPLKTKEDDFIGKEEL--I 678 Query: 195 QHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VGKKALAIARID 245 + + +K+ + + P G + ++G + +GK +A+ RID Sbjct: 679 KRKANPQKKLVGLELVGHEPALHGDCVHVGRGQVGVITSGMLSPKLGKN-IALCRID 734 >gi|218295168|ref|ZP_03496004.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23] gi|218244371|gb|EED10896.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23] Length = 349 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 56/305 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ A+PFLQ DV L A+ S + + +G ++ + ++ E ++ Sbjct: 49 SHMGEFLIRGEEALPFLQWATVNDVGKLKVGRAQYSMLPSERGGVVDDIYLYRLGEAVYL 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------- 113 + ++ + +D L L +E++ ++ + + + Sbjct: 109 MVVNAANIAKDLDHLK--ALARGFRVEVEDVSEATALLALQGPEAAAILQSLTGADLSAR 166 Query: 114 ----------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------L 147 + R + + + L Sbjct: 167 RKNDVFEAQVAGRPARLARTGYTGEDGFELFLAPEDAEAIFEALLAAGARPCGLGARDTL 226 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G + P + + K ++G+E + R++ + + Sbjct: 227 RLEAGFPLYGHELT-EATNPLCTPWAWV--VKREKD-FLGKEAMLAS----PCREKLVGL 278 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVR 263 +P G +L++ +G + K +A+A ++K + + V G Sbjct: 279 VLETGIPREGYAVLSEKGPVGRVTSGGYSPLLEKGIALAYVEK---EAEGPFFVEVRGRA 335 Query: 264 VKASF 268 V AS Sbjct: 336 VPASI 340 >gi|255264150|ref|ZP_05343492.1| aminomethyltransferase [Thalassiobium sp. R2A62] gi|255106485|gb|EET49159.1| aminomethyltransferase [Thalassiobium sp. R2A62] Length = 403 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 59/294 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A L + T V + G ++ ++ ++ ED F + Sbjct: 83 IEISGPDAETLLNKVFTRSVSKVKPGRCSYQFACYHDGGMITDGVLLRLAEDRFWM---- 138 Query: 72 SKRD-SLIDKLLFYK-------------------------------------LR----SN 89 ++ D L + R + Sbjct: 139 AQADGDLFSWYKAHAEGLDVKIHDPNVWVSQIQGPRSLELLAAVLDGPMPDPFRYFDCAE 198 Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 V I Q + E + D + + + + RI Sbjct: 199 VSIAGQTCWISRSGFTNELGWEVYLLPDTNIPAIGDRIMEVGAAFGILLTGTPVFRARRI 258 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+++ +DF + P DA + + ++G++ + R M +TG Sbjct: 259 EAGLLNAGSDFG-AETMPFDAGLGGF--VEFDDRDFVGRKALEAAD--KSCRTWGMRVTG 313 Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259 + G + D E+G + + I R+D D A G + V Sbjct: 314 --GVAQLGRVMTIDGKEVGLVCSSGYSPYQGCGVCIVRMD--DPAQGPGTKVEV 363 >gi|310766525|gb|ADP11475.1| glycine cleavage system aminomethyltransferase T [Erwinia sp. Ejp617] Length = 365 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L ++ ++ I ED F Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTAMLNASAGVIDDLIVYFISEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117 L ++ + R+ + + + V + + ++ D Sbjct: 110 RLVVNSATREKDLAWVAEHAAAYGVELTERDDLSLIAVQGPNAQRKAQRVFDDIQRDAVS 169 Query: 118 -----------------------ERFSIA-----DVLLHRTWGHNEKIASDIKTYHELRI 149 + IA L + + + LR+ Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNEQAAELWQQLLAAGVQPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + T+ P A M G + +IG+E++ + + R Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRQFIGREMLELQRAKGTERLVGLIMTE 288 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 K + + +L I G+ +G +A+AR+ + + + Sbjct: 289 KGVLRNALPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGDQAVVQIRNRA 346 Query: 262 VRVKASFP 269 + V + P Sbjct: 347 MPVTVTKP 354 >gi|254390790|ref|ZP_05006002.1| aminomethyltransferase [Streptomyces clavuligerus ATCC 27064] gi|294815230|ref|ZP_06773873.1| Aminomethyltransferase [Streptomyces clavuligerus ATCC 27064] gi|326443586|ref|ZP_08218320.1| glycine cleavage system aminomethyltransferase T [Streptomyces clavuligerus ATCC 27064] gi|197704489|gb|EDY50301.1| aminomethyltransferase [Streptomyces clavuligerus ATCC 27064] gi|294327829|gb|EFG09472.1| Aminomethyltransferase [Streptomyces clavuligerus ATCC 27064] Length = 371 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 91/281 (32%), Gaps = 50/281 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + ++ AR + I G IL ++ ++ E Sbjct: 52 LSHMGEITVLGPQAAALLDFALVGN-IGSVAVGRARYTMICQEDGGILDDLIVYRLGETE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100 +++ + S +++D L Y L + + ++G+ Sbjct: 111 YMVVANASNAQTVLDALTARSAGFDAEVRDDREAYALLAVQGPASPGILAQLTDADLDGL 170 Query: 101 VLSWNQEHTFSN----------------SSFIDERFS-IADVLLHRTWGHNEKIASDIKT 143 T + F++ R++ L + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVEPRYAEKLWSALTEAGREAGLAPCGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199 LR+ G+ + ++ P DA + + + K G ++G+ E + Sbjct: 231 RDTLRLEAGMPLYGNELTT-SLTPFDAGLGRV--VKFEKEGDFVGRAALEQAAERARTAP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 R ++ +P +G ++ D IGT+ L Sbjct: 288 PRVLVGLVAEGRRVPRAGYDVVADGTVIGTVTSGAPSPTLG 328 >gi|62181566|ref|YP_217983.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167554236|ref|ZP_02347977.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168242844|ref|ZP_02667776.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261781|ref|ZP_02683754.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194443469|ref|YP_002042307.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451730|ref|YP_002047040.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|224584845|ref|YP_002638643.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|75505570|sp|Q57K60|GCST_SALCH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238690650|sp|B4TGX5|GCST_SALHS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238693618|sp|B4T550|GCST_SALNS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797879|sp|C0PY28|GCST_SALPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|62129199|gb|AAX66902.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194402132|gb|ACF62354.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410034|gb|ACF70253.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205321513|gb|EDZ09352.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338233|gb|EDZ24997.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348976|gb|EDZ35607.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224469372|gb|ACN47202.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716047|gb|EFZ07618.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 364 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 3/122 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123 L ++ + R+ + + + + I ++ ++ + + F DE R ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169 Query: 124 DV 125 + Sbjct: 170 GM 171 >gi|213582699|ref|ZP_03364525.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 174 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159 >gi|150398506|ref|YP_001328973.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] gi|150030021|gb|ABR62138.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] Length = 789 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 94/295 (31%), Gaps = 56/295 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYEHGGMIDDGTLFRLGDK 516 Query: 64 TF-ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109 F + D L ++ R+ V ++ + + + Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFRAWVRSSTDQMHNIAVQGPKSRDILREIIWTAPRQS 576 Query: 110 -----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS------------- 139 F + + R L + + H + + Sbjct: 577 TISELEWFRFAVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDAVWQAGEPHG 636 Query: 140 ----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 ++ +RI G++ + DF T P +A + + +IG+E + ++ Sbjct: 637 MKPMGLEALDMVRIEAGLIFAHYDFDDQTD-PFEAGIGFTVPLKSKPDDFIGRE--ALMR 693 Query: 196 HRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + R+ + + ++ G + +IG + K +A+ARID Sbjct: 694 RKESPRQLMVGLDVLANEAIGHGDCVHVGRAQIGVVTSATRSPVLGKTIALARID 748 >gi|66523500|ref|XP_394029.2| PREDICTED: aminomethyltransferase, mitochondrial-like [Apis mellifera] Length = 455 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ A FL+++ T+D+ L A + G IL +++K ED + L + Sbjct: 137 RVSGRDATQFLESLTTSDLKNLGNGCAVLAVFTDENGGILDDLIVTKDGEDRYFLVSNAG 196 Query: 73 KR 74 +R Sbjct: 197 RR 198 >gi|161616005|ref|YP_001589969.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189039318|sp|A9N3N3|GCST_SALPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|161365369|gb|ABX69137.1| hypothetical protein SPAB_03805 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 364 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119 L ++ + R+ + + + + I ++ ++ ++ E+ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTEQ 163 >gi|323309501|gb|EGA62712.1| Gcv1p [Saccharomyces cerevisiae FostersO] Length = 143 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + + Sbjct: 5 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 64 Query: 72 SKRD 75 + Sbjct: 65 GCAE 68 >gi|126725469|ref|ZP_01741311.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales bacterium HTCC2150] gi|126704673|gb|EBA03764.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales bacterium HTCC2150] Length = 1003 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 53/270 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +L R + T G ++ ++++I++DT++ Sbjct: 670 STLGKIIVKGPDAGKFLDMMYTNMMSSLKPGKCRYGLVCTENGFLMDDGVVARIDDDTYL 729 Query: 67 LEIDRSKRDSLIDKL-----------LFY-----KLRSNVII---------------EIQ 95 D + + Y + + + + ++ Sbjct: 730 CHTTTGGADRIHAHMEEWLQTEWWDWKVYTANVTEQFAQIAVVGPNARKVLEKLGGMDVS 789 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139 ++W + R S + L + + + Sbjct: 790 KEALPFMTWA-DGIIGGFDCRAYRISFSGELSYEIAVPASQGQAFWDALIEAGQEFGVMP 848 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + + T+ P D + IS K ++G+ R + Sbjct: 849 YGTETLHILRAEKGFIMIGDE-SDGTVIPQDLNLQW--AISKKKEDFLGKRAQLRSHMAD 905 Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIEI 227 R + + + T + P G+ ++ D Sbjct: 906 PDRWKLVGLETLDGSVLPDGAYVVADGTNA 935 >gi|254476777|ref|ZP_05090163.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp. R11] gi|214031020|gb|EEB71855.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp. R11] Length = 806 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 13/145 (8%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A L + + + +L +G+I L I ++ ED F L Sbjct: 489 VEGPDAYALLDRLTANRMPQ-KVGSITLTHMLNRRGRIELETTIVRMAEDKFYLVCAAFF 547 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERFSI 122 L+D L ++ ++V + LS N E N++F Sbjct: 548 EQRLLDHLAAHRNSADVTVRALSDTWGALSLNGPKSRDVLGACTEARLDNAAFRWLSAQE 607 Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL 147 D+ H+ W A ++ + Sbjct: 608 IDIAGHKVWAFRMSYAGELG-WELH 631 >gi|163800500|ref|ZP_02194401.1| glycine cleavage system protein T2 [Vibrio sp. AND4] gi|159175943|gb|EDP60737.1| glycine cleavage system protein T2 [Vibrio sp. AND4] Length = 372 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 90/271 (33%), Gaps = 42/271 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D Sbjct: 54 SHMGQLRLIGDGAAAFLETLVPVDIVDLEEGKQRYAFFTNDQGGIMDDLMVANLG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++ + ++ I L + + ++ +Q + + ++ F+D Sbjct: 113 VVVNAACKEQDIAHLQAHLPPSVELEVIDDRALLALQGPKAAEVLASLAPEVADMLFMDV 172 Query: 119 R---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 R A L G E + LR+ Sbjct: 173 RNVELLGVECIVSRSGYTGEDGYEISVPADKAVELALELTGKEEVEWIGLGARDSLRLEC 232 Query: 152 GIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMI 206 G+ D P + + +G + G +++ ++I+ +++ RKR + Sbjct: 233 GLCLYGHDLNTTTTPVEASLLWGIQKVRRAGGEREGGFPGVDIILNQIETKDVARKRIGL 292 Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236 + T G + D +IG + Sbjct: 293 VGQTKAPVREGVELFDADGNKIGVVTSGTAG 323 >gi|157148444|ref|YP_001455763.1| glycine cleavage system aminomethyltransferase T [Citrobacter koseri ATCC BAA-895] gi|166221545|sp|A8APB4|GCST_CITK8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157085649|gb|ABV15327.1| hypothetical protein CKO_04269 [Citrobacter koseri ATCC BAA-895] Length = 364 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 45/118 (38%), Gaps = 1/118 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 L ++ + R+ + + + + I ++ ++ ++ E A Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTEEQRKA 167 >gi|317476877|ref|ZP_07936120.1| glycine cleavage system T protein [Bacteroides eggerthii 1_2_48FAA] gi|316907052|gb|EFV28763.1| glycine cleavage system T protein [Bacteroides eggerthii 1_2_48FAA] Length = 373 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|309365375|emb|CAP23358.2| hypothetical protein CBG_02210 [Caenorhabditis briggsae AF16] Length = 885 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 56/279 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G+ A+ +LQ + +A+V P + + +G + +S++ + F + Sbjct: 552 HLQGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTI 610 Query: 73 KRDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS 111 +++ ++ + + L++ V ++ I G+ +S N TF Sbjct: 611 QQERVLVWMKKWQSILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFR 670 Query: 112 --------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146 + + L + N EKI K Y + Sbjct: 671 CQEINIGMATGIRAISVTHCGELGWVIYIPNEVAQNVYEKILEAGKEYSLQHAGYYTLRQ 730 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LRI V D +T+ P + L + K +IG++ + R + ++ + Sbjct: 731 LRIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVNKRFVQL 786 Query: 207 I-----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + TD P G IL D +G L Sbjct: 787 LVDGHDKETDPWPQGGETILKDGRPVGLTTSAAYGFTLG 825 >gi|84516541|ref|ZP_01003900.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] gi|84509577|gb|EAQ06035.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] Length = 379 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 91/286 (31%), Gaps = 54/286 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F Q + D+ + + I G IL ++ ++ E+ F + + Sbjct: 66 VEITGPDAAQFTQMLTCRDLSKMAVGQCKYILITNADGGILNDPILLRLAENHFWISLAD 125 Query: 72 SKRDSLIDKLLFYKLRS--NVIIEI----------------------QPINGVVLSWNQE 107 S ++ + S NV I + I + W +E Sbjct: 126 S---DILLWAQGVAIHSGLNVTIREPDVSPLQLQGPKSGEIMKALFGEDILDLRYYWLRE 182 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151 + + R + L + + + + T RI Sbjct: 183 VELNGIPLVVSRTGWSSELGYEIYLRDGAKGDLLWETIMAAGMEFGLKPGHTSSIRRIEG 242 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ + D T P + D L + + +IG+ + RI+ + RK+ +I D Sbjct: 243 GMLSYHAD-ADMTTNPFELGFDRLVNLDMEAD-FIGKAALRRIKDEGVSRKQIGLIIDGD 300 Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 L + I IG + V ALA+ + + Sbjct: 301 PLAGPNTTFWAINLGGDTIGKVTSAVYSPRLKQNIALAMVSAEHAN 346 >gi|71275486|ref|ZP_00651772.1| Glycine cleavage system T protein [Xylella fastidiosa Dixon] gi|71900647|ref|ZP_00682772.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1] gi|170729389|ref|YP_001774822.1| glycine cleavage system aminomethyltransferase T [Xylella fastidiosa M12] gi|238687914|sp|B0U270|GCST_XYLFM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|71163786|gb|EAO13502.1| Glycine cleavage system T protein [Xylella fastidiosa Dixon] gi|71729582|gb|EAO31688.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1] gi|167964182|gb|ACA11192.1| Aminomethyltransferase [Xylella fastidiosa M12] Length = 368 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 ++ + R+ + + NV +E + ++ ++ + E Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169 Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146 RF+ +V H RT E I ++ Sbjct: 170 KLGRFAALEVASHSKKTLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT E G + KA+ AR+ + + + Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345 Query: 261 GVRVKASF 268 + V+ Sbjct: 346 AIPVRVVK 353 >gi|290476413|ref|YP_003469318.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Xenorhabdus bovienii SS-2004] gi|289175751|emb|CBJ82554.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Xenorhabdus bovienii SS-2004] Length = 365 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 88/284 (30%), Gaps = 49/284 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ D+ L A + +L G ++ ++ +D + Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDITKLTEQGKALYTGMLNVSGGVIDDLIVYFFTDDFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + RD + + + V I ++ ++ S +++ A Sbjct: 110 RMVVNSATRDKDLAWIQQHATNYPVEITVRDDLALIAVQGPNAQSKAQSLLNDEQKQAVA 169 Query: 126 LLHRTWGHNE----------------------KIASDIK--------------TYHELRI 149 + +G + A+D LR+ Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIALPKEQAADFWQKLLAAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + TI P A M +IG+E + R + + +I Sbjct: 230 EAGMNLYGQEM-DETISPLAANMGWTIAWKPEDRQFIGREALERQREVGT-EQLVGLIMR 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARI 244 + G + D G + V +A+AR+ Sbjct: 288 EKGVLRGGLTVHFTDK-AGEMRSGVITSGTFSPTLGFSIALARV 330 >gi|254423925|ref|ZP_05037643.1| Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. PCC 7335] gi|196191414|gb|EDX86378.1| Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. PCC 7335] Length = 601 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 106/316 (33%), Gaps = 67/316 (21%) Query: 4 VYLSNQSFIK---VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 V L + S ++ V G A+ LQ + +V L + +L P G ++ ++ ++ Sbjct: 266 VALMDLSALRKFEVIGPDALALLQWTFSRNVAKLAVGQSAYGCLLNPHGGMIDDGIVFRL 325 Query: 61 EE-----------DTFILE---------------------------IDRSKRDSL----- 77 E D L+ R + L Sbjct: 326 GEVAYRYIGNCDTDGLWLQKVAKEKGFTVTISNSSDRLHNLALQGPYSRDLLEPLVEIDD 385 Query: 78 ------IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIADVLLHRT 130 +++L F++ V + + ++ F+ + + +L + Sbjct: 386 GWEIENLNELKFFRF---VTGTVGEVPVLLSRTGYTGELGYELFVHPNQGAQLWDVLMKA 442 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 G + + ++ RI G++ +F I P+ + G+ TK +IG+ Sbjct: 443 GGAYDLLPLGMQGLDRARIEAGLLAAGREF-NDLISPYQVGIGWSVGLK-TKPDFIGRAA 500 Query: 191 VSRIQHRNIIRKRPMIITGTDDLP------PSGSPILTDDIEIGTLGVVVGKKALAIARI 244 + +I+ R +++ G + P G + GT V+ +++A+A++ Sbjct: 501 LEKIRDRPPFVGVGLLLEGNEVAGGGQCVYPVGDYWRVGHVTSGTFSPVL-NRSIALAQV 559 Query: 245 DKVDHAIKKGMALTVH 260 + G L V Sbjct: 560 --APEYAQAGTELEVG 573 >gi|218129902|ref|ZP_03458706.1| hypothetical protein BACEGG_01485 [Bacteroides eggerthii DSM 20697] gi|217988012|gb|EEC54337.1| hypothetical protein BACEGG_01485 [Bacteroides eggerthii DSM 20697] Length = 362 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FLQ + + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPHASDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|322383441|ref|ZP_08057222.1| glycine cleavage system aminomethyltransferase T-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152273|gb|EFX45098.1| glycine cleavage system aminomethyltransferase T-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 348 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 89/287 (31%), Gaps = 50/287 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS+ I V G + FL ++T D+ + + + +L G ++ + K ED Sbjct: 25 IDLSSAGKIVVKGDEHVEFLDGLVTKDIQFMEEERTAYTLLLREDGTVIDLVNLFK-NED 83 Query: 64 TFILEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQE-------------- 107 + + K++ ++ L K + + I + ++ + Sbjct: 84 SITIITASEKKEQVLAWLQENREKQENQIEITDISESHSLIGFEGPYAWKLAQQFLHFEI 143 Query: 108 ----------HTFSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHELRIN---- 150 T + + R + ++ E + + ++ E+ + Sbjct: 144 SSLPFQSFALTTLQGTEIVLARTGVTGEYGYQLLFGRELRDAVLETMNSFKEIDLQDVDK 203 Query: 151 -------HGIVDPNTDFLPSTIFPH-DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 I P +F + ++ + K +IG+E + + + ++ Sbjct: 204 EALETAMLEIRHPYFEFKTGQELSLFEVCLEWF--VDFYKDAFIGKEFLEQQLEKGFSQR 261 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL------AIAR 243 T ++ I + IG + + L + R Sbjct: 262 IVGFTTNKENPVSLDDEIYVGEHAIGKVIEMKESPGLNAKLGIGLLR 308 >gi|254466289|ref|ZP_05079700.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium Y4I] gi|206687197|gb|EDZ47679.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium Y4I] Length = 1010 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 82/299 (27%), Gaps = 71/299 (23%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + T G ++ ++++I+EDTF+ Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCTENGFLMDDGVVARIDEDTFLCHTTTGG 738 Query: 74 RDSLIDKL-----------LFYKLRSNVI-------------IEIQPINGVVLSWNQE-- 107 + + + Y +NV ++ + Sbjct: 739 AERIHGHMEEWLQTEWWDWKVYV--ANVTEQYAQIAVVGPKARKVLEKLNAAAGGGMDVS 796 Query: 108 -HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------- 146 + D + D +R E + + Sbjct: 797 KEALPFMEWRDGKIGSFDARAYRISFSGELSYEIAVAASEGQAFWDALMDAGKEFGVMPY 856 Query: 147 -------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 LR G + + T+ P D + +S K Y+G+ +R + Sbjct: 857 GTETLHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKDDYLGKRAQARSHMTDP 913 Query: 200 IRKRPMIIT------GTDDLPPSGSPILTDDIE--IGTLG----VVVGKKALAIARIDK 246 R + + + D G I + IG + + +A+ + Sbjct: 914 DRWQLVGLETVDGSVLPDGAYAVGEGINANGQRNMIGRVTSTYYSATLGRGIAMGLVKH 972 >gi|170724176|ref|YP_001751864.1| glycine cleavage system aminomethyltransferase T [Pseudomonas putida W619] gi|169762179|gb|ACA75495.1| glycine cleavage system T protein [Pseudomonas putida W619] Length = 360 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G A +LQ ++ DV L A S +L +G ++ + + E+ + Sbjct: 50 SHMTVIDIDGADATVWLQRLLANDVARLAGVGKALYSPLLNEEGGVIDDLIAYRT-ENGY 108 Query: 66 ILEIDRSKRDSLIDKL 81 L + + R +++ L Sbjct: 109 RLITNAATRANVLAWL 124 >gi|300858857|ref|YP_003783840.1| glycine cleavage system T protein [Corynebacterium pseudotuberculosis FRC41] gi|300686311|gb|ADK29233.1| glycine cleavage system T protein [Corynebacterium pseudotuberculosis FRC41] gi|302206564|gb|ADL10906.1| Glycine cleavage system T protein [Corynebacterium pseudotuberculosis C231] gi|302331119|gb|ADL21313.1| Glycine cleavage system T protein [Corynebacterium pseudotuberculosis 1002] gi|308276807|gb|ADO26706.1| Glycine cleavage system T protein [Corynebacterium pseudotuberculosis I19] Length = 377 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 68/314 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A FL A+I+ + LP A+ S I++ G I+ + ++ +D Sbjct: 52 LSHMGEIRVSGPQAGDFLDYALISQ-LSVLPVNKAKYSMIVSEDGGIIDDLITYRLADDE 110 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------------- 107 F++ + + ++L V + + + +++ Sbjct: 111 FLVVPNAGNAAVVAEELRSRAAGYQVTVADESTDTALIAVQGPRSQALLLSLIDASADPD 170 Query: 108 ---------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE----- 146 + S + R + N+K + Y Sbjct: 171 TADLISNMRYYSCGNAVIAGFSVLLARTGYTGEDGFELYISNDKAPALWDAIYQAGQDER 230 Query: 147 -------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQE-VV 191 LR+ G+ + + P DA + +L +S K G ++G+E + Sbjct: 231 YSLLPCGLASRDSLRLEAGMPLYGNELSRD-LSPRDAGLGML--VSKKKEGDFVGKEALS 287 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVG----KKALAIARIDK 246 + H ++ + + G+ IL D +GT+ +A+A ++K Sbjct: 288 APSTHTRVL---VGLASSERRAARHGAEILDGDGNVVGTVTSGQPSPTLGHPIALAYVEK 344 Query: 247 VDHAIKKGMALTVH 260 + G LT Sbjct: 345 --ELSEVGTELTAD 356 >gi|153807754|ref|ZP_01960422.1| hypothetical protein BACCAC_02037 [Bacteroides caccae ATCC 43185] gi|149129363|gb|EDM20577.1| hypothetical protein BACCAC_02037 [Bacteroides caccae ATCC 43185] Length = 361 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 48/301 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + +V L + + G I+ L+ E + ++L ++ + Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKIQYTCFPNEDGGIVDDLLVYHYEPEKYLLVVNAAN 115 Query: 74 RDSLIDKLLFY-----------------KLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 D D + + ++ I+ +Q + V LS +TF F Sbjct: 116 MDKDWDWCVSHNTEGAELENSSDNIGQLAVQGPKAILALQKLTDVDLSSIPYYTFKVGKF 175 Query: 116 IDER--------------------FSIADVLLHRTWGHNEKI---ASDIKTYHELRINHG 152 E S AD + + E+ + LR+ G Sbjct: 176 AGEDNVIISNTGYTGAGGFELYFYPSAADTIWTAIFEAGEEFGIKPVGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K +I + ++ + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FINRPMLEKQKAEGTTRKLVGFEMIDRG 293 Query: 213 LPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +P G ++ + +IG + K + + + I + + + G ++KA Sbjct: 294 IPRHGYELVNQEGEKIGVVTSGTMSPTRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAV 353 Query: 268 F 268 Sbjct: 354 V 354 >gi|114564312|ref|YP_751826.1| glycine cleavage system aminomethyltransferase T [Shewanella frigidimarina NCIMB 400] gi|122298883|sp|Q07YC7|GCST_SHEFN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|114335605|gb|ABI72987.1| glycine cleavage system T protein [Shewanella frigidimarina NCIMB 400] Length = 364 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 3/163 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L I+ + + + + Sbjct: 50 SHMTVVDVTGSDACAFLRKLLANDVAKLTVPGKALYGGMLDENAGIIDDLITYYLTDTHY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + RD + + +V++ +P ++ + + F E+ + + Sbjct: 110 RVVVNSATRDKDLAWINKQAAAFDVVVTERPELAMIAVQGPNAKAKAATVFSAEQNAAVE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166 + + + Y E + + + L + Sbjct: 170 GMKPFFGVQSASLFIATTGYTGEAGYEIIVPETEAEALWQALL 212 >gi|86360689|ref|YP_472577.1| aminomethyltransferase protein [Rhizobium etli CFN 42] gi|86284791|gb|ABC93850.1| probable aminomethyltransferase protein [Rhizobium etli CFN 42] Length = 341 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 103/314 (32%), Gaps = 73/314 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 + + G AI L I T D+ + + + +L +G ++ + ++++L Sbjct: 23 VHLVGPHAIAVLDYITTRDLTKIYPGRSVYATMLNDRGHFTDDCIVYRTGPNSWMLVHGS 82 Query: 68 -----EIDRSKR---------DSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 E+ + D L +D L Y + I + Sbjct: 83 GSGHEEVVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 133 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 134 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 193 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ + Sbjct: 194 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLEGK 250 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + D ++G + + KK++AIAR+D VD A+ Sbjct: 251 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 307 Query: 254 GMALTVHGVRVKAS 267 G L V G VKAS Sbjct: 308 GTKLEVRGKTVKAS 321 >gi|308188008|ref|YP_003932139.1| aminomethyltransferase [Pantoea vagans C9-1] gi|308058518|gb|ADO10690.1| aminomethyltransferase [Pantoea vagans C9-1] Length = 365 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 94/308 (30%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F Sbjct: 50 SHMTIVDLTGPRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMSETFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFSIA 123 L ++ + R+ + + + + + + ++ + + E R ++A Sbjct: 110 RLVVNSATREKDLAWITQHAEGYGITLTERDDLALIAVQGPQAQQKAQTLFSEEQRLAVA 169 Query: 124 DV------------------LLHRTWGHNEKIASDIKTY----------------HELRI 149 + + + LR+ Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPAEEAANFWQRLLAAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ + P A M +IG+E + + R K +I Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTVCWEPADRDFIGREALELQRERGT-EKLVGLILT 287 Query: 210 TDDLPPSGSPI--LTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261 + +G P+ D ++ + G ++A+AR+ + + Sbjct: 288 EKGVLRNGQPVRFTDDQGQLQEGIITSGSFSPTLGYSIALARV-PASIGSTAIVEIRNRQ 346 Query: 262 VRVKASFP 269 + V+ + P Sbjct: 347 MPVQVTRP 354 >gi|294083913|ref|YP_003550670.1| putative sarcosine oxidase (subunit alpha) oxidoreductase protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663485|gb|ADE38586.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 980 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 97/291 (33%), Gaps = 66/291 (22%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A F+ + T D L + R +L+ G IL + K+ ++ F++ Sbjct: 657 ISGRDAAAFIDLLYTNDFSNLEIGMGRYGIMLSEDGLILDDGVTFKLGDNHFMMSTSTGH 716 Query: 74 RDSLIDKLLFYKLRSNVI-----IEIQPI--------------NGVVLSWNQEHTFSNSS 114 D + + Y L V + I PI V+ + + + S + Sbjct: 717 ADIVFRHME-YVL--QVECPDWQVWITPITSQWCNATICGPKARDVMAALDIDIDISAEA 773 Query: 115 F-------------------------------IDERFSIADVLLHRTWGHN-EKIASDIK 142 F I R + A L G + + Sbjct: 774 FPFMGIRDAIVAGIPARICRVSFTGEVSFEISIWPRHAEAMWLRIMEAGEPFGIVPVGSE 833 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T H LR+ G + + +T P+D M + +S K IG+ V + R+ Sbjct: 834 TSHVLRVEKGFLSLGHE-ADATADPYDLGMGWI--MSRNKMHAIGRRSVDIRRSSGRPRR 890 Query: 203 RPMII--TGTDDLPPSGSPILTDDIEIGTLG-------VVVGKKALAIARI 244 + + +L P G+PI + + + G V K+ +A+ + Sbjct: 891 ELVGLLPESGGELVPEGAPITPNGARVASEGFVSACVWSVANKQVIALGLL 941 >gi|161506398|ref|YP_001573510.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039316|sp|A9MRH0|GCST_SALAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|160867745|gb|ABX24368.1| hypothetical protein SARI_04596 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 364 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + R+ + + + + I ++ ++ ++ E Sbjct: 110 RLVVNSATREKDLAWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTE 162 >gi|769682|gb|AAB05000.1| glycine cleavage T protein [Saccharomyces cerevisiae] Length = 400 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEEDTFILEIDR 71 K+ G ++ FLQ + D LP S +L PQG ++ +I+K +E+ F + + Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDENEFYIVTNA 131 Query: 72 SKRD 75 + Sbjct: 132 GCAE 135 >gi|307946494|ref|ZP_07661829.1| aminomethyltransferase [Roseibium sp. TrichSKD4] gi|307770158|gb|EFO29384.1| aminomethyltransferase [Roseibium sp. TrichSKD4] Length = 426 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 63/284 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL-EID 70 I++ G A L + T V + G ++ ++ ++ D F + ++D Sbjct: 106 IEISGPDAETLLNMVFTRSVSKVKPGRCSYQFACYHDGGMITDGVLLRLSPDRFWMAQVD 165 Query: 71 RSKRDSLIDKLLFYKLRS---NVIIEI-------------QPINGVVLSWNQEHTF---- 110 +YK + +V I + VL F Sbjct: 166 GDL-------FSWYKAHAEGLDVKIHDPNVWVSQIQGPRSLDLLAAVLDGPMPDPFRYFD 218 Query: 111 ------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------------YHE 146 + + R + L + + I + Sbjct: 219 CAEVSIAGQTCWISRSGFTNELGWEVYLLPDTDIQAIGDRIMEVGAVFDILLTGTPVFRA 278 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI G+++ +DF T P +A + + ++G++ + + R M Sbjct: 279 RRIEAGLLNAGSDFGAETT-PFEAGLGGF--VEFDDRDFVGRK--ALEEACKSCRTWGMR 333 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDK 246 +TG + G + D ++G + + I R+D Sbjct: 334 VTG--GVAQLGRVMTIDGKDVGQVCSSGYSPYQGCGVCIVRMDD 375 >gi|99081095|ref|YP_613249.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040] gi|99037375|gb|ABF63987.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040] Length = 799 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 77/267 (28%), Gaps = 45/267 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FL + + + P +A+L G+ + ++ D + Sbjct: 485 SSFGKIDVTGPDSEAFLLHVCSGHMARAP-GSVIYTAMLNEHGRFESDITVHRLATDHYR 543 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------------- 104 L + + + LL + +V I + Sbjct: 544 LFVGTAAIKRDMAWLLRHSREFDVKICDTTEDFATFGLMGPEAMRIARDLGAAELASLGY 603 Query: 105 --NQEHTFSNSSFIDERFSIADVLLHRT-------------WGHNEKIASDIKTYHELRI 149 + E + R S + + +RI Sbjct: 604 FKHGEAMIAGHPVRAARLSYVGEAGWEITCKTTSAQEVYTALLDAGATPAGLYAQTSMRI 663 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + S + P + + G +L K G +IG + + ++ +++ + ++ Sbjct: 664 EKGFCAMGHEL-DSDVSPLEVGL----GFALRKSGGFIGAQALEEMKKKSLNHQIVSLLF 718 Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVVV 234 D+ P G P+ IG Sbjct: 719 EEVDVVPLGHEPVSARGDIIGHTTSCA 745 >gi|89067482|ref|ZP_01154995.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] gi|89047051|gb|EAR53105.1| aminomethyl transferase family protein [Oceanicola granulosus HTCC2516] Length = 365 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 103/300 (34%), Gaps = 48/300 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A Q + D+ + R + G ++ ++ K+ +D F L I Sbjct: 65 VQLEGPDAARLAQVLTPRDIAGMEPGQGRYVPLCDHDGWLINDPVLLKLADDRFWLSIAD 124 Query: 72 S--------------------------------KRDSLIDKLLFYKLR--SNVIIEIQPI 97 S K + ++ LL +R E + + Sbjct: 125 SDIGLWATAIGRERGLDVRVSEPDVAPLAVQGPKAEDVVAALLGEAVREIRPFRFEPREL 184 Query: 98 NGVVL-----SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 +G+ L W+++ F D R ++A R G I RI G Sbjct: 185 DGIPLLLARSGWSKQGGFELY-LTDTRRALALWARVREAGQPFGIGPGAPN-DVERIESG 242 Query: 153 IVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITG 209 ++ D T P++ + + +IG++ ++ + + R+R +++ G Sbjct: 243 LISYGADMRRQTHPATPYEMGFGGMVDLGHD---FIGRDALAPLADQTPPRRRVGVVVEG 299 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKASF 268 P P+ D E+G + +V K L + + ++ G+++ V A Sbjct: 300 DPPTPGHPVPLERDGAEVGFVSELVYSKRLGRTIAVGLLQSGVEDGLSVRVGETLYPAHL 359 >gi|300896199|ref|ZP_07114748.1| glycine cleavage system T protein [Escherichia coli MS 198-1] gi|300359933|gb|EFJ75803.1| glycine cleavage system T protein [Escherichia coli MS 198-1] Length = 387 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFSEDFF 132 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182 >gi|16761836|ref|NP_457453.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766356|ref|NP_461971.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143323|ref|NP_806665.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415001|ref|YP_152076.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167994120|ref|ZP_02575212.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231162|ref|ZP_02656220.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236115|ref|ZP_02661173.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168463774|ref|ZP_02697691.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823052|ref|ZP_02835052.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470268|ref|ZP_03076252.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735702|ref|YP_002116003.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251637|ref|YP_002147969.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263429|ref|ZP_03163503.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363930|ref|YP_002143567.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200388887|ref|ZP_03215499.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927977|ref|ZP_03219177.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213162880|ref|ZP_03348590.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427306|ref|ZP_03360056.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646976|ref|ZP_03377029.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865007|ref|ZP_03387126.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238909855|ref|ZP_04653692.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289811788|ref|ZP_06542417.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823833|ref|ZP_06543445.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54037177|sp|P64223|GCST_SALTI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|54041303|sp|P64222|GCST_SALTY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|61213256|sp|Q5PJG4|GCST_SALPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226697521|sp|B5F5I0|GCST_SALA4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238690722|sp|B5BFM0|GCST_SALPK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238693698|sp|B4TV24|GCST_SALSV RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|25328330|pir||AE0873 aminomethyltransferase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421606|gb|AAL21930.1| glycine cleavage complex protein T [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504138|emb|CAD02885.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138957|gb|AAO70525.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129258|gb|AAV78764.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194456632|gb|EDX45471.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711204|gb|ACF90425.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633701|gb|EDX52115.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095407|emb|CAR60966.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215340|gb|ACH52737.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241684|gb|EDY24304.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290889|gb|EDY30243.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199605985|gb|EDZ04530.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322299|gb|EDZ07496.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205327990|gb|EDZ14754.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334487|gb|EDZ21251.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340621|gb|EDZ27385.1| glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261248187|emb|CBG26023.1| Glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995211|gb|ACY90096.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159611|emb|CBW19130.1| Aminomethyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914077|dbj|BAJ38051.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087486|emb|CBY97251.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225729|gb|EFX50783.1| Aminomethyltransferase glycine cleavage system T protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613454|gb|EFY10395.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621046|gb|EFY17904.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624110|gb|EFY20944.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628151|gb|EFY24940.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633270|gb|EFY30012.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636152|gb|EFY32860.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639490|gb|EFY36178.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647577|gb|EFY44066.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648761|gb|EFY45208.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653816|gb|EFY50142.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657922|gb|EFY54190.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664025|gb|EFY60224.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668964|gb|EFY65115.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673042|gb|EFY69149.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677967|gb|EFY74030.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681143|gb|EFY77176.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687927|gb|EFY83894.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323131411|gb|ADX18841.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194877|gb|EFZ80064.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196628|gb|EFZ81776.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202672|gb|EFZ87712.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207841|gb|EFZ92787.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212607|gb|EFZ97424.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214910|gb|EFZ99658.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222640|gb|EGA07005.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225080|gb|EGA09332.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230602|gb|EGA14720.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235047|gb|EGA19133.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239086|gb|EGA23136.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244556|gb|EGA28562.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247171|gb|EGA31137.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253346|gb|EGA37175.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256347|gb|EGA40083.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262477|gb|EGA46033.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267427|gb|EGA50911.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269169|gb|EGA52624.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 364 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159 >gi|68473519|ref|XP_719084.1| hypothetical protein CaO19.5519 [Candida albicans SC5314] gi|46440885|gb|EAL00186.1| hypothetical protein CaO19.5519 [Candida albicans SC5314] Length = 394 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK A LQ I D+ LP + S +L G ++ +I+K ED + + + Sbjct: 73 ISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNAGC 132 Query: 74 RDSLIDKLL 82 R+ + + Sbjct: 133 REKDVKFIK 141 >gi|91762978|ref|ZP_01264943.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718780|gb|EAS85430.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] Length = 452 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 88/327 (26%), Gaps = 77/327 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 I+V G A F +IT D + AR + G +L ++ +I +D F Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRISKDEFWFSLSD 161 Query: 67 ----------------------LE-IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103 ++ + L+ + V ++ P G+ Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVCPVQIQGPKSKALMKDLIGDQVDLDNMPFYGLA-- 219 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT----------------YHE 146 E S + + + + + K A D+ H Sbjct: 220 ---EAKVGGRSCVISQSGFSGEAGYEIYLREATKYADDMWNAVLEAGKKHSLMVIAPAHH 276 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIR 201 RI GI+ D P + +S K Y+G+ + ++ Sbjct: 277 RRIQAGILSWGQDMDHQH-NPFQCNLGYQVSLSGKGEWNKKADYVGKAALEKMGADLKAG 335 Query: 202 KRPMIITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIAR 243 ++P + L G PI + +G + A+ Sbjct: 336 QKPYKLQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKGQNIAMGYVP 394 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPH 270 D +A G G + K P Sbjct: 395 FDGTLNA--NGFPKGKVGTKYKVHLPA 419 >gi|332989922|gb|AEF08905.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 364 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159 >gi|328958050|ref|YP_004375436.1| glycine cleavage system aminomethyltransferase T [Carnobacterium sp. 17-4] gi|328674374|gb|AEB30420.1| glycine cleavage system aminomethyltransferase T [Carnobacterium sp. 17-4] Length = 370 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FL ++T DV L A+ +AI+ G + +I K+++ ++ Sbjct: 53 SHMGEILVKGTGSEGFLNHLLTNDVSKLTVGQAQYNAIVYENGGTIDDLIIFKLDKLGYL 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFS 121 + + S + + + + +VI+E + + G++ D+ S Sbjct: 113 VTPNASNTEKVFQWMKKEIV-EDVILENRSEDIGLIALQGPYAERILQKLADDDLS 167 >gi|325185478|emb|CCA19961.1| unnamed protein product [Albugo laibachii Nc14] Length = 412 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 105/319 (32%), Gaps = 69/319 (21%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ +++ G FL++++ AD+ A+ S + G I+ +I+K Sbjct: 81 SLFDVSHMGQLRITGHDREVFLESLVVADLAAAEIGEAKLSLLTNQNGGIIDDCVITKY- 139 Query: 62 EDTFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 ED F + ++ + + + ++ + + IEI +V + D Sbjct: 140 EDHFYVVVNAGNKGNDLQH--MHRELEQFKGDANIEILEDRALVALQGPGAVD---ALRD 194 Query: 118 ERFSIADV------------------------------------------------LLHR 129 E F+ D + Sbjct: 195 EMFASVDFEELEFMNGLYTSITSSSALKGLDVILTRCGYTGEDGFELSIPSAHVEQFTRQ 254 Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQ 188 ++ + + + LR+ G+ D P T P +A + +G + G Sbjct: 255 LLRYDSVLEAGLGARDSLRLEAGLCLHGQDITP-TTTPIEATLAWTIAKRRREQGGFPGH 313 Query: 189 EVVS-RIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIA 242 ++ +++++ +KR + +G+ + ++ +G + L +A Sbjct: 314 AIIMDQLKNKTFSQKR-VGFGSEGTTFRTGTTLYDSNGRTVGKVTSGTFSPCLQSPIGMA 372 Query: 243 RIDKVDHAIKKGMALTVHG 261 IDK A K G + G Sbjct: 373 YIDK--DAAKIGSEVRAKG 389 >gi|149918878|ref|ZP_01907364.1| glycine cleavage system T protein [Plesiocystis pacifica SIR-1] gi|149820252|gb|EDM79669.1| glycine cleavage system T protein [Plesiocystis pacifica SIR-1] Length = 367 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G A+ +Q ++T DV L A +A P G I+ ++ + Sbjct: 52 SHMGEIDFAGPRALEAVQRLVTNDVSKLVDGQALYTATCRPSGGIVDDCIVYRRGAQELR 111 Query: 67 LEIDRSKRDSLIDKLLFYK 85 + ++ S + Sbjct: 112 IVVNASNIAKDEAHFREHV 130 >gi|126466007|ref|YP_001041116.1| glycine cleavage system aminomethyltransferase T [Staphylothermus marinus F1] gi|126014830|gb|ABN70208.1| aminomethyltransferase [Staphylothermus marinus F1] Length = 370 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 61/295 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEEDTF 65 S+ +++ G +Q I T D+ + + + L ++ ++ KI ++ + Sbjct: 50 SHMGRVRLRGPDVFELIQYIYTKDLSKVKPGWMSGPTLALNQWARVKDDEMLYKISDEEW 109 Query: 66 ILEIDRSKRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQEHT--------FS 111 +L + R+ ++ L Y V+IE +++ + Sbjct: 110 LLVPNALVREKMLSYLKSIIDSHQY----KVVIEDLTHKYSMIAVQGPKSPNIMEKIGLK 165 Query: 112 NSS------------------FIDERFSIADVLLHRTWGHNEKIA-------------SD 140 ++ F+ R WG + IA + Sbjct: 166 EAADLKPLQFITNIKLNDIKLFLVSRSGWTGEDGFEIWGEHSSIAKLLDILVKEGVKPAG 225 Query: 141 IKTYHELRINHGIVDPNTDFLPS-TIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRN 198 I LR+ G V + ++ T +P + L I+ +K Y+G+E + R R Sbjct: 226 IIARDTLRMEMGFVLGDHEYGEDPTKYPCVISLRYGLGAITWSKKGYVGEEAL-RAYLRE 284 Query: 199 IIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGK----KALAIARID 245 +R M I + +P +P+ +D +G + + +A A ID Sbjct: 285 GVRWIRMGIKMSKKNARIIPREHTPVYVEDQVVGWVTSGTYSPILRRGIAQAYID 339 >gi|294955718|ref|XP_002788645.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239904186|gb|EER20441.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 394 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 88/273 (32%), Gaps = 43/273 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ ++V GK + F++++ D+ L R + I TPQ I+ +I E Sbjct: 70 SLFDVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-E 128 Query: 62 EDTFILEIDRSKRDSLIDKLL----------------------------FYKLR------ 87 D + ++ S + + + L+ Sbjct: 129 GDHLYVVLNASNTEKDMKHIETALADFDGDVSLEPHPEASLIALQGPKAMEVLQPMLAED 188 Query: 88 -SNVII------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140 + V + + V ++ + + + + + + Sbjct: 189 LTKVPFMVSFATTVNGVPNVTVTRCGYTGEDGFELSIPTSEGVNAIAEKMIENEAVLPAG 248 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LRI G+ D +T AL ++ + + G EV R + + Sbjct: 249 LGARDTLRIEAGLCLYGHDISETTTIAEAALSWTVSKRRRNEANFPGVEVFLRQVKKGGV 308 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ + + T GS IL TD +IG + Sbjct: 309 DRKRVGLLVTGPPAREGSTILDTDSNKIGEVTS 341 >gi|159904360|ref|YP_001551704.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9211] gi|159889536|gb|ABX09750.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9211] Length = 359 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 98/296 (33%), Gaps = 61/296 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62 S+ + + GKS LQ ++ +D+ + A + +L G I+ +I + Sbjct: 33 SHMGVLLIQGKSVKDNLQKLVPSDLYQIGSGEACYTVLLNKHGGIIDDLIIYDLGVNDQN 92 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQE-----------HT 109 ++ +L I+ S DS + + L++ + I +GV+L+ T Sbjct: 93 IESLMLVINASCSDSDTNWIKA-NLQNQSISINDAKKDGVLLAVQGPDSEKSLNKIFGST 151 Query: 110 FSNSSFIDERFS------------------------------------IADVLLHRTWGH 133 F S RF + L Sbjct: 152 FEESISNLPRFGHRKLKLQFQRTKKPCPVFIAKTGYTGEEGYELLLEKEMGITLWEELVK 211 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + + LR+ + D P +A + L + + K +IG+E + + Sbjct: 212 SGVTPCGLGARDTLRLEAAMHLYGNDL-NEETTPFEAGLGWLVHLEMPK-TFIGREALEK 269 Query: 194 IQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARI 244 + + + ++I + G ++ ++ IG + KA+A+A I Sbjct: 270 QIEKGVSKLLVGLVIQDERAIARKGYEVIYENKPIGKITSGSWSPTLEKAIALAYI 325 >gi|71898613|ref|ZP_00680783.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1] gi|71731560|gb|EAO33621.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1] Length = 368 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLILYYLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118 ++ + R+ + + NV +E + ++ ++ + E Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169 Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146 RF+ +V H RT E I ++ Sbjct: 170 KLGRFAALEVASHSKKPLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D + P++A + + + +IG+ V+ + + + R+ Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVILDEGRN-FIGRNVLEQQKTNGVSRQMI 287 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 ++ + G +LT E G + KA+ AR+ + + + Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345 Query: 261 GVRVKASF 268 + V+ Sbjct: 346 EIPVRVVK 353 >gi|257387939|ref|YP_003177712.1| glycine cleavage system aminomethyltransferase T [Halomicrobium mukohataei DSM 12286] gi|257170246|gb|ACV48005.1| glycine cleavage system T protein [Halomicrobium mukohataei DSM 12286] Length = 363 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 95/290 (32%), Gaps = 51/290 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---ED 63 S+ I V G A +Q + T DV L A +AI G +L ++ ++ E Sbjct: 51 SHMGEIVVSGTEATGLMQRLTTNDVTDLRPGQAHYAAITREDGVMLDDTVVYRLPEAVEG 110 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFS-----NSSFI 116 ++ + + + + Y + I+E + +++ S + + Sbjct: 111 EYLFIPNAGHDEQMATRWREYADERDLDAIVENRTTEYGLIALQGPDAPSLLADETTLSL 170 Query: 117 DE--RFSIADVLLH---------------------------RTWGHNEKIASDIKTYHEL 147 DE RF IA + WG + + L Sbjct: 171 DELGRFEIATATVAGVETLVATTGYTGEAGYELVVPWDETETVWGALDCQPCGLGARDTL 230 Query: 148 RINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 R+ G + DF P P++A + + + ++G++ + + K Sbjct: 231 RLEMGFLLSGQDFDPEDDPRNPYEAGIGFVVDLDTE---FVGRDALEGVDVEGPAEKLTG 287 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVD 248 + +P +G + T + +GT+ ALA D ++ Sbjct: 288 LSLIDRGVPRAGYDVTTPNGDRVGTVTSGTMSPTLGEPIALAYIDTDYIE 337 >gi|15963852|ref|NP_384205.1| putative aminomethyltransferase protein [Sinorhizobium meliloti 1021] gi|15073027|emb|CAC41486.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021] Length = 351 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 73/313 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 + + G AI L I T D+ + + + +L +G ++ + ++++L Sbjct: 33 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYACMLNDRGHFTDDCIVYRTGPNSWMLVHGS 92 Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 D L +D L Y + I + Sbjct: 93 GSGYEEIVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 143 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 144 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMIWDRIVAEGKEMGIIPCCFSVLDM 203 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ R Sbjct: 204 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGR 260 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + + ++G + + K+++AIAR+D VD A++ Sbjct: 261 ERFKIFGMLIDADGP-ADLGDEVYAEGKKVGVITCPSYSTLTKRSMAIARLD-VDKAVQ- 317 Query: 254 GMALTVHGVRVKA 266 G L VHG + A Sbjct: 318 GAKLEVHGKNLNA 330 >gi|218706410|ref|YP_002413929.1| glycine cleavage system aminomethyltransferase T [Escherichia coli UMN026] gi|293406403|ref|ZP_06650329.1| gcvT [Escherichia coli FVEC1412] gi|298382139|ref|ZP_06991736.1| aminomethyltransferase [Escherichia coli FVEC1302] gi|226711372|sp|B7N7E8|GCST_ECOLU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|218433507|emb|CAR14410.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli UMN026] gi|291426409|gb|EFE99441.1| gcvT [Escherichia coli FVEC1412] gi|298277279|gb|EFI18795.1| aminomethyltransferase [Escherichia coli FVEC1302] Length = 364 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|332991991|gb|AEF02046.1| glycine cleavage system aminomethyltransferase T [Alteromonas sp. SN2] Length = 359 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E + Sbjct: 50 SHMTIVDVKGTQAKAYLQHLLANDVAKLQIKGKALYSGMLNEEGGVVDDLIVYYFDETNY 109 Query: 66 ILEIDRSKRDSLIDKLL 82 L ++ + R+ ++ L Sbjct: 110 RLVVNSATREKDMNWLN 126 >gi|224369594|ref|YP_002603758.1| GcvT [Desulfobacterium autotrophicum HRM2] gi|223692311|gb|ACN15594.1| GcvT [Desulfobacterium autotrophicum HRM2] Length = 416 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 39/88 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + V G A+ LQ T D+ +L AIL QG + ++ I F+ Sbjct: 54 SHMACVTVRGNDALALLQRCHTRDLASLAQGRCVYGAILDEQGHTVDDAIVYCIGPGDFM 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI 94 + ++ ++ L + + +V+I+ Sbjct: 114 VCVNAGMGATVTAHLAGHGKKLDVVIKD 141 >gi|326572537|gb|EGE22526.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis CO72] Length = 366 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G +A FLQ ++ DV L A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFAGKALYSAMLNDDGGVIDDLIVYRMNEDE 110 >gi|271499200|ref|YP_003332225.1| glycine cleavage system T protein [Dickeya dadantii Ech586] gi|270342755|gb|ACZ75520.1| glycine cleavage system T protein [Dickeya dadantii Ech586] Length = 366 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F Sbjct: 50 SHMTIVDLRGARVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + +V I + ++ + Sbjct: 110 RLVVNSATREKDLAWITEHAASFHVAITEREDLSLIAVQGPQA 152 >gi|311111988|ref|YP_003983210.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931] gi|310943482|gb|ADP39776.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931] Length = 372 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 98/291 (33%), Gaps = 64/291 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++ G A FL A+++ + L A+ S + +G ++ + ++ ++ Sbjct: 50 LSHMGEFRITGPDAAAFLDYALVSN-MSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108 Query: 65 FILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID 117 F++ + + D ++ ++L + +V + + +++ E + D Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF----DVKFVNESDDTSLIAVQGPRAEEILLAAGASD 164 Query: 118 ER--------------FSIADVLLHRTWGHNE-------KIASDIKTYHE---------- 146 E + DVLL RT E A+ +K + Sbjct: 165 EDAVRELKYYASVPVTIAGVDVLLARTGYTGEDGFELFVPNANAVKLWDALAAAGESFGL 224 Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 LR+ G+ + I P ++ + L I+L K + V R Sbjct: 225 TPAGLAARDSLRLEAGMPLYGHELGLD-ITPFESGLGRLVEIALEKKTV---DFVGRTAL 280 Query: 197 RNIIR----KRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAI 241 + + + + + P IL + +IG + + L Sbjct: 281 TELAKSPSERILVGLKAQAKRPARAGSILVDAEGNQIGEVTSGIPSPTLGY 331 >gi|242240714|ref|YP_002988895.1| glycine cleavage system aminomethyltransferase T [Dickeya dadantii Ech703] gi|242132771|gb|ACS87073.1| glycine cleavage system T protein [Dickeya dadantii Ech703] Length = 366 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A SA+LTP ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVARLTQPGKALYSAMLTPSAGVIDDLIVYFLREDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106 L ++ + R+ + + +V I + ++ Sbjct: 110 RLVVNSATREKDLAWIREQAAPFSVEIRERDDLSLIAVQGP 150 >gi|222479665|ref|YP_002565902.1| glycine cleavage system T protein [Halorubrum lacusprofundi ATCC 49239] gi|222452567|gb|ACM56832.1| glycine cleavage system T protein [Halorubrum lacusprofundi ATCC 49239] Length = 390 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I+V G A + + T DV L ++ +AI G +L ++ ++ + Sbjct: 51 SHMGEIEVSGPDATRLMNRLTTNDVTALDPGDSQYAAITNEDGVMLDDTVVYRLPDG 107 >gi|313159459|gb|EFR58822.1| aminomethyltransferase [Alistipes sp. HGB5] Length = 366 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ LQ I T DV L + + + +G I+ L+ +++ +T++ Sbjct: 49 SHMGEIWVKGPKALGLLQRITTNDVSKLYDGKVQYTCMPNGRGGIVDDILVYRVDAETYM 108 Query: 67 LEIDRSKRD 75 L ++ + + Sbjct: 109 LCVNAANIE 117 >gi|254510526|ref|ZP_05122593.1| Glycine cleavage T-protein [Rhodobacteraceae bacterium KLH11] gi|221534237|gb|EEE37225.1| Glycine cleavage T-protein [Rhodobacteraceae bacterium KLH11] Length = 816 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 91/320 (28%), Gaps = 68/320 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT----LPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ ++V G A +L + +P S L +G I I+++ Sbjct: 491 MSSFGKLRVEGPDATRYL-----NYIAGGEYDVPVGKIVYSQFLNRRGGIEADVTITRLA 545 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104 + +++ + R D++ + R + + I + + Sbjct: 546 GNIYLVVTPAATRY--HDQVWMERHRGDFNVTITDVTAAEATLAVMGPQSRALLEAVSPN 603 Query: 105 -----------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147 QE R + L + ++ +T +E Sbjct: 604 DFTNAVNPFGTAQEIEIGMGLARVHRVTYVGELGWEVYVSSDMAGHVFETLYEAGQDMGL 663 Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 RI G D DA + + K +IG++ V R + Sbjct: 664 KLCGMHMMDTCRIEKGFRHFGHDITCEDHV-IDAGLGF--AVKTDKPDFIGRDAVLRRKE 720 Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247 + +T + L PIL D +G L G L + Sbjct: 721 TGPQSRMLQFRLTDPEPLLYHNEPILRDGEYVGYLASGAYGHHLGGAIGLGYVPCEGETA 780 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + + V GV+VKA Sbjct: 781 SDVLASTYEIDVCGVKVKAE 800 >gi|116053363|ref|YP_793687.1| glycine cleavage system aminomethyltransferase T [Pseudomonas aeruginosa UCBPP-PA14] gi|296392072|ref|ZP_06881547.1| glycine cleavage system aminomethyltransferase T [Pseudomonas aeruginosa PAb1] gi|115588584|gb|ABJ14599.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa UCBPP-PA14] Length = 360 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E+ + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-ENGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|110667715|ref|YP_657526.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] gi|109625462|emb|CAJ51889.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] Length = 852 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +++ S I V G A +LQ + + DV + R S +L G IL + ++ Sbjct: 528 SMFDMTSFSSIIVEGVDAESYLQRMCSNDVA-IDPGDVRYSLLLNEGGGILADITVVGLD 586 Query: 62 EDTFIL 67 ++ +++ Sbjct: 587 DERYMV 592 >gi|32563613|ref|NP_492730.2| hypothetical protein Y106G6H.5 [Caenorhabditis elegans] gi|25005037|emb|CAB63337.2| C. elegans protein Y106G6H.5, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 855 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 93/278 (33%), Gaps = 56/278 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A+ +LQ + +A+V P + + +G + +S++ E F + + Sbjct: 523 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQ 581 Query: 74 RDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS- 111 ++ ++ + + L++ V ++ I G+ +S N TF Sbjct: 582 QERVLVWMKKWQAILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRC 641 Query: 112 -------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147 + + L + N EKI K Y +L Sbjct: 642 QEINIGMATGIRAISVTHCGELGWVIYVPNEVAQNVYEKILDAGKEYSLQHAGYYTLRQL 701 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 RI V D +T+ P + L + K +IG++ + R + ++ ++ Sbjct: 702 RIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVSKRFVQLL 757 Query: 208 -----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 TD P G IL D +G L Sbjct: 758 VDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTLG 795 >gi|84684671|ref|ZP_01012571.1| sarcosine oxidase, alpha subunit family protein [Maritimibacter alkaliphilus HTCC2654] gi|84667006|gb|EAQ13476.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales bacterium HTCC2654] Length = 1004 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 84/281 (29%), Gaps = 61/281 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP R + T G + ++++I E T++ Sbjct: 669 STLGKILVTGPDAGKFLDMLYTNVMSSLPVGKCRYGLMCTENGFVTDDGVVARIGEQTWL 728 Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLRSNVIIEIQPING 99 D + + Y K R V +E Sbjct: 729 CHTTTGGADRIHGHMEDWLQCEWWDWKVYTANLTEQYAQVAVAGPKAR-KV-LEALGGMD 786 Query: 100 V------VLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD--- 140 V ++W + T + R S L W + + Sbjct: 787 VSKEAMPFMTWA-DGTLAGIPARVYRISFTGELSYEIAVPANRGAELWAKVAEAGAAHGI 845 Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + H +R G V + T+ P D M + IS K Y+G+ R Sbjct: 846 QPYGTEAMHIMRAEKGFVMIGDE-TDGTVIPQDLNMGWI--ISKKKTDYLGKRAQERSHM 902 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237 + R R + + D GS I +G G++ Sbjct: 903 ASPDRWRLVGLETLD-----GSVIPDGAYAVGEGFNANGQR 938 >gi|317049389|ref|YP_004117037.1| glycine cleavage system T protein [Pantoea sp. At-9b] gi|316951006|gb|ADU70481.1| glycine cleavage system T protein [Pantoea sp. At-9b] Length = 365 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 50/122 (40%), Gaps = 3/122 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLQGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123 L ++ + R+ + + + + + + + ++ + S +R ++A Sbjct: 110 RLVVNSATREKDLAWIGEHAQQYGITLTERDDLALIAVQGPQAQQKAQSLFSAAQRDAVA 169 Query: 124 DV 125 + Sbjct: 170 GM 171 >gi|254428321|ref|ZP_05042028.1| glycine cleavage system T protein [Alcanivorax sp. DG881] gi|196194490|gb|EDX89449.1| glycine cleavage system T protein [Alcanivorax sp. DG881] Length = 363 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 45/278 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + + G A +L+ ++ DV + A + +L G ++ ++ K +++ + Sbjct: 54 SHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYK-QDNGYR 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSI--- 122 L ++ + R++ +D + V I +P ++ + + + R Sbjct: 113 LVVNCATRETDLDWMEKQAGGFAVDIHERPELAMLAIQGPKAREILAELLSGARAEAVSS 172 Query: 123 ---------ADVLLHRTWGHNE-------KIASDIKTY----------------HELRIN 150 D ++ RT E A + + LR+ Sbjct: 173 LKIFAFAQDGDWMIARTGYTGEDGVEIMLPNADAVTLWGQLLAAGVAPIGLGARDTLRLE 232 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D +TI P +A M ++ + +IG++ + Q + +I+ G Sbjct: 233 AGLNLYGNDM-DNTITPWEANMGWTVMLNDRE--FIGRQPLLNQQKNGHGEQVGLILEGK 289 Query: 211 DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244 L +L + E GT +GK +A+AR+ Sbjct: 290 GVLRAHQKVLLANGEEGEITSGTFSPTLGKS-IALARL 326 >gi|158313618|ref|YP_001506126.1| glycine cleavage system aminomethyltransferase T [Frankia sp. EAN1pec] gi|238686858|sp|A8LFB7|GCST_FRASN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|158109023|gb|ABW11220.1| glycine cleavage system T protein [Frankia sp. EAN1pec] Length = 365 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 83/300 (27%), Gaps = 55/300 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A F+ +T D+ + A+ + G ++ + D Sbjct: 54 SHLGKARVAGPGAAEFVNTCLTNDLRRVGPGQAQYTLCCDETGGVVDDLIAYYYAVDNVF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------SNSS 114 L + + ++ +L + V + VL+ + S Sbjct: 114 LVPNAANTAEVVRRLAAQA-PAGVAVTDLHTEFAVLAVQGPAAPEVLRKLGLPADGAYMS 172 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HEL 147 F D + V++ R+ E + + L Sbjct: 173 FADAEWKGRPVIVCRSGYTGEAGFELLPRWADAVPLWDELLTVVTGLGGLPCGLGARDTL 232 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R G D +I P A + K + G+E + + R + Sbjct: 233 RTEMGYPLHGQDLSL-SISPVQARSGW--AVGWDKPAFWGREALLAERAAGPARSLWGLR 289 Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + +P + D E+G + LA+ D ++ G + V Sbjct: 290 SNDRGIPRPHMRVSGPDGAELGEVTSGTFSPTLRQGIGLALL-----DRSVTAGDEVAVD 344 >gi|284030627|ref|YP_003380558.1| glycine cleavage system T protein [Kribbella flavida DSM 17836] gi|283809920|gb|ADB31759.1| glycine cleavage system T protein [Kribbella flavida DSM 17836] Length = 363 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 91/309 (29%), Gaps = 49/309 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A ++ + +T D+ + A+ + G ++ + ++ Sbjct: 52 SHLGKARVVGPGAAAYVNSCLTNDLGKIGPGQAQYTLCCAEDGGVVDDLIAYLHADNDVF 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L + + ++ +L + V + + +L+ ++ Sbjct: 112 LIPNAANTAEVVRRLQADA-PAGVEVTNTHDDYAILAVQGRNSDEVVGAIGLPTGHDYMA 170 Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147 ++ + + R + N + + + + Y L Sbjct: 171 FAVAEYAGTPVVVCRTGYTGERGYELVIPNDAAVAVFDALLAAGEAYGIVPAGLGARDTL 230 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMI 206 R G D P I P A + K + G + + + + R + Sbjct: 231 RTEMGYPLHGQDISPQ-ITPVQARSGW--AVGWKKQRFWGDQALRAEKEAGPAKILRGLR 287 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID-KVDHAIKKGMALTVHG 261 G P + D +G + KK +A+A +D +V + + + Sbjct: 288 AVGRGIPRPHMTVADADGTALGEVTSGTFSPTLKKGVALALLDARVKEGDQVTVDIRGRQ 347 Query: 262 VRVKASFPH 270 + P Sbjct: 348 EPFEVVKPP 356 >gi|320104212|ref|YP_004179803.1| glycine cleavage system T protein [Isosphaera pallida ATCC 43644] gi|319751494|gb|ADV63254.1| glycine cleavage system T protein [Isosphaera pallida ATCC 43644] Length = 392 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 13/150 (8%) Query: 8 NQSFIKVCGKSA--IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + + G A L + T V L A+ S IL Q ++ L+ ++ ED Sbjct: 60 HMGRLDFDGPDADVTTLLDHVTTNAVTRLKPGRAQYSLILNDQAGVIDDVLVYRLPEDRL 119 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + + + R +++D++ V + P +V ++ + R Sbjct: 120 FMVCNAANRAAVMDQIQR------VAARVAPQARLV---DRTADTVMVAIQGPRALEIVR 170 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN-HGIV 154 L E + +++K+Y LR GI Sbjct: 171 DLANDPAQAEAL-TNLKSYGCLRATLAGIP 199 >gi|319898677|ref|YP_004158770.1| glycine cleavage system T protein [Bartonella clarridgeiae 73] gi|319402641|emb|CBI76186.1| glycine cleavage system T protein [Bartonella clarridgeiae 73] Length = 373 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 91/283 (32%), Gaps = 49/283 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G+ A FL + D L +R + +L Q IL ++++++E F+ Sbjct: 62 SHMQLIAVEGQKAAEFLSYALPIDASLLQKGQSRYNYLLNEQAGILDDLILTRLDECRFM 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + +L R+ V++ +Q + + + F Sbjct: 122 LVVNAGNAQADFVELKK---RAFGFECQIVALERVLLALQGPQAAAVIADAGFPGNELLF 178 Query: 116 ------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 I S A L+ + + LR+ Sbjct: 179 MQGFEPQKNWFVTRSGYTGEDGFEIALPESQARSLVEKLLDDCRVEWIGLAARDSLRLEA 238 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D P I P +A + S+ K + G E + + R R + + Sbjct: 239 GLCLHGNDITPD-ITPIEAALTWAVSKSVREKAKFYGAEAFLKAYQKGPSRCR-VGLKPQ 296 Query: 211 DDLPPSGSPILTDDI--EIGTLGVV------VGKKALAIARID 245 P +L DD +IG + G A+ ID Sbjct: 297 GRQPIRAGAVLLDDKGNQIGVVTSGGFGPSFNGPVAMGYVPID 339 >gi|220904060|ref|YP_002479372.1| glycine cleavage system T protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868359|gb|ACL48694.1| glycine cleavage system T protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 360 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 82/270 (30%), Gaps = 51/270 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L ++ ++ TL R +LT +G +L +I + D+F+ ++ + Sbjct: 57 RIEGPGATEALSRAVSHNLETLAPGKCRYGFLLTEKGGVLDDGIIYRFGPDSFMAVVNAA 116 Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE-------------HTFSNSSFIDE 118 + L +L ++ I +I G V + H SF + Sbjct: 117 CAPGDLATLRA-RLPESIRITDISAETGKVDLQGPDSLDVLEKIMGENFHDLGYFSFRES 175 Query: 119 RFSIADVLLHRTWGHNE-------KIASDIKTY-----------------HELRINHGIV 154 ++ VL+ RT E + LR+ G+ Sbjct: 176 KWQGVPVLVSRTGYTGELGYELYLPTDKTEAFWKALLADERVKPVGLGARDTLRLEAGLP 235 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D P +A M + Y+G+E +R+ + + Sbjct: 236 LYGHDL-DEEHTPAEAGMARMMTSQAD---YVGREGAQ------TVREVLVPLQIEGRRA 285 Query: 215 PSGSPILT--DDIEIGTLGVVVGKKALAIA 242 +L +G + +L Sbjct: 286 ARHGDVLALPGGEAVGRITSGSFAPSLGYV 315 >gi|207722207|ref|YP_002252644.1| aminomethyltransferase( partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206587382|emb|CAQ17965.1| probable aminomethyltransferase( partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 133 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEED 63 S+ + + G FL+ ++ +V L A + +L +G ++ ++ +ED Sbjct: 73 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNHKGGVIDDLIVYFFQED 130 >gi|152987324|ref|YP_001351276.1| glycine cleavage system aminomethyltransferase T [Pseudomonas aeruginosa PA7] gi|150962482|gb|ABR84507.1| glycine cleavage system T protein [Pseudomonas aeruginosa PA7] Length = 360 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ ++ + Sbjct: 50 SHMTVVDVAGEQARAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-DNGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFRVDLKERGDLAMLAIQGPNARMHTSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D L RT E + + LR+ Sbjct: 169 DLKPFQGRAEGDWFLARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMAWTVAWEPAARGFVGRRALEAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + + G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGVGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|121601850|ref|YP_989358.1| glycine cleavage system aminomethyltransferase T [Bartonella bacilliformis KC583] gi|120614027|gb|ABM44628.1| glycine cleavage system T protein [Bartonella bacilliformis KC583] Length = 373 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 88/263 (33%), Gaps = 41/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL + D L + +R + +L Q IL +I+++ E F+ Sbjct: 62 SHMKLIVVEGPQAVEFLSYALPVDAALLKDRQSRYNYLLNEQAGILDDLIITRVGECRFM 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTF---SNSSFIDERF- 120 L ++ + +L R V + + + V+L+ +++ F Sbjct: 122 LVVNAGNAQADFIELE----RRAVGFDCQVTACDRVLLALQGPQAAAVMADAGFPRNELF 177 Query: 121 ------SIADVLLHRTWGHNEK------------------IASDIKTY------HELRIN 150 D + R+ E ++ D + LR+ Sbjct: 178 FMQGFEPQQDWFVTRSGYTGEDGFEIALPVNQACSLAEKLLSDDRVEWIGLAARDSLRLE 237 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D P T AL + K + G + + R+R + T Sbjct: 238 AGLCLHGNDITPDTNPIEAALTWAVPKTVREKAKFYGAKAFLEAYEKGPSRRRVGLRPQT 297 Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232 +G+ +L + +IG + Sbjct: 298 RQPVRAGAMLLDNEGNQIGVVTS 320 >gi|56697204|ref|YP_167568.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi DSS-3] gi|56678941|gb|AAV95607.1| sarcosine oxidase, alpha subunit family [Ruegeria pomeroyi DSS-3] Length = 1010 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 73/300 (24%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I+EDTF+ Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTTTGG 738 Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE--------------- 107 + + + Y +NV E VV ++ Sbjct: 739 AERIHGHMEEWLQTEWWDWKVYV--ANVT-EQYAQIAVVGPKARKVLEKLNAKAGGGMDL 795 Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146 + D R D +R E + + + Sbjct: 796 SVEALPFMEWRDGRIGEFDARAYRISFSGELSYEIAVPASQGLAFWEALVDAGKEFGVMP 855 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G + + T+ P D + +S K Y+G+ R + Sbjct: 856 YGTETLHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKDDYLGKRAQERSHMAD 912 Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVG----KKALAIARIDK 246 R + + + T + P G+ + + + IG + + +A+ I Sbjct: 913 RDRWKLVGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLGRGIAMGLIQH 972 >gi|206603170|gb|EDZ39650.1| Glycine cleavage system T protein [Leptospirillum sp. Group II '5-way CG'] Length = 377 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 62/313 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A + +IT+++ +P A +L P G ++ + + Sbjct: 48 SHMGHFVLRGIDARGAVNRLITSNLKNVPPGKALYGHLLNPAGGVIDDIMAYHFGPERVD 107 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L ++ S R+ + + L + + +E V ++ Sbjct: 108 LIVNASNREGDARWIRDH-LPAGIGLEDCSPGHVGIAVQGPRASRVLEDVLPGILDMRRR 166 Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY 144 F+ R +G + Sbjct: 167 ETRLLTIEGGEEFLVGRTGYTGEDGWEFFGPAGPGISFYEKLLQAGKKTGVLACCGLGAR 226 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G + + DA +D + +S TK ++G+ S ++ R P Sbjct: 227 DLLRLEMGYPLYGQEL-NERLSSFDAGLDFV--VSRTKPEFVGR--TSILESDGHPRMNP 281 Query: 205 M------IITGTDDLPPSGSPI-LTDDIEIGTLGV------VVGKKALAIARIDKVDHAI 251 + +P +G PI D +G + V LA D + Sbjct: 282 AHPALGGFVVEGRGIPRTGCPIEKMDGTPVGEVTSGGFSPRVGSGFGLAYLDRDFLAFFR 341 Query: 252 KKGM-ALTVHGVR 263 G + +HGV Sbjct: 342 NGGPGQVRIHGVA 354 >gi|148653519|ref|YP_001280612.1| glycine cleavage system aminomethyltransferase T [Psychrobacter sp. PRwf-1] gi|148572603|gb|ABQ94662.1| aminomethyltransferase [Psychrobacter sp. PRwf-1] Length = 381 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 3/139 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64 S+ V G A +LQ ++ DV L A S +L G ++ ++ I ED Sbjct: 52 SHMVITDVEGAQAKAWLQKLLANDVAKLKTVGKALYSGMLNADGGVIDDLIVYLINEDET 111 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 + + + + RD + + +V + +P ++ + Sbjct: 112 QYRIISNAATRDKDLAQFNKVAEDFDVRLTERPELAILAVQGPKAVAKLKRAKPAWADTL 171 Query: 124 DVLLHRTWGHNEKIASDIK 142 D L I + Sbjct: 172 DALKPFVGADLTDIEGNDW 190 >gi|294084752|ref|YP_003551510.1| putative oxidoreductase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664325|gb|ADE39426.1| putative oxidoreductase [Candidatus Puniceispirillum marinum IMCC1322] Length = 823 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 13/151 (8%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ IK+ GK A LQ I DV + + L G I I+++ D F Sbjct: 490 MSSFGKIKIIGKDAEAVLQTIAANDVA-VAPGKIVYTQFLNEAGHIEADVTITRLSSDEF 548 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 ++ + +R ++ I + + T S S + D Sbjct: 549 LIVTPAAT------------VRRDLHWINGHIPDTAHAIAIDVTVSESVLVVMGPQARDF 596 Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 L T ++ I HGI Sbjct: 597 LQPLIPQSLANDDFAFGTMQDIEIGHGIARA 627 >gi|121997980|ref|YP_001002767.1| glycine cleavage system aminomethyltransferase T [Halorhodospira halophila SL1] gi|166221554|sp|A1WWA3|GCST_HALHL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|121589385|gb|ABM61965.1| aminomethyltransferase [Halorhodospira halophila SL1] Length = 360 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 18/174 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP--YKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + + G A L+ + DV L A S +L +G ++ ++ E+ + Sbjct: 50 SHMAVTDLSGPGARALLREQLANDVAKLDGRPGQALYSCLLNGRGGVVDDLIVYLREDAS 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + + + + R+ + +LL + V E + ++ A Sbjct: 110 YRVVSNAATREKVRPRLLEQAHAAGVTAEARDDLAMIAVQG---------------PRAA 154 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 +L + +G A K + I I T + F D + Sbjct: 155 SVLEQLFGDQAAAALACKPFQAAAIGE-IFAGRTGYTGEDGFELILPADQAPAL 207 >gi|107104317|ref|ZP_01368235.1| hypothetical protein PaerPA_01005391 [Pseudomonas aeruginosa PACS2] Length = 360 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ALKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKSAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|84499197|ref|ZP_00997485.1| sarcosine oxidase, alpha subunit family protein [Oceanicola batsensis HTCC2597] gi|84392341|gb|EAQ04552.1| sarcosine oxidase, alpha subunit family protein [Oceanicola batsensis HTCC2597] Length = 998 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 93/322 (28%), Gaps = 63/322 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A F+ + T + TL R + + G ++ ++++ +EDTF+ Sbjct: 666 STLGKIIVKGPDAGRFMDMMYTNMMSTLKPGRCRYGLMCSENGFLMDDGVVARWDEDTFM 725 Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNV-IIEIQPINGVVLSWNQEH------------- 108 D + + + V + + + Sbjct: 726 CHTTTGGADRIHAHMEEWLQTEWWDWKVWTVNATEQYAQIGVVGPQARAVLQKLGARNIA 785 Query: 109 --TFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHEL------------ 147 F SF D R + + ++R E + + L Sbjct: 786 NEDFPFMSFQDHRLAGIEARVYRISFSGELSYEIAVPAGQGLALWKALHEAGAEWNVMPY 845 Query: 148 --------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 R G + + T+ P D + IS K +IG+ R Sbjct: 846 GTEALHVMRAEKGFIMIGDE-TDGTVIPQDLNLHW--AISKKKDDFIGKRAQQRADMTRP 902 Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247 R + + + T + P G+ L + V G + +A+ + Sbjct: 903 DRWKLIGLETSDGSVLPEGAYALAEGKNANGQRNVQGRVTSTYHSPTLGRGIAMGLVLNG 962 Query: 248 DHAIKKGMAL-TVHGVRVKASF 268 + + +A V G V A Sbjct: 963 PDRMGETVAFNKVDGSTVPAKI 984 >gi|26249320|ref|NP_755360.1| glycine cleavage system aminomethyltransferase T [Escherichia coli CFT073] gi|227888454|ref|ZP_04006259.1| glycine cleavage system aminomethyltransferase T [Escherichia coli 83972] gi|300980301|ref|ZP_07174955.1| glycine cleavage system T protein [Escherichia coli MS 45-1] gi|301049311|ref|ZP_07196281.1| glycine cleavage system T protein [Escherichia coli MS 185-1] gi|31340144|sp|Q8FE65|GCST_ECOL6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|26109728|gb|AAN81933.1|AE016766_21 Aminomethyltransferase [Escherichia coli CFT073] gi|227834723|gb|EEJ45189.1| glycine cleavage system aminomethyltransferase T [Escherichia coli 83972] gi|300298910|gb|EFJ55295.1| glycine cleavage system T protein [Escherichia coli MS 185-1] gi|300409309|gb|EFJ92847.1| glycine cleavage system T protein [Escherichia coli MS 45-1] gi|307554881|gb|ADN47656.1| aminomethyltransferase (tetrahydrofolate-dependent) of glycine cleavage system [Escherichia coli ABU 83972] gi|315293862|gb|EFU53214.1| glycine cleavage system T protein [Escherichia coli MS 153-1] Length = 364 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|313675723|ref|YP_004053719.1| glycine cleavage system t protein [Marivirga tractuosa DSM 4126] gi|312942421|gb|ADR21611.1| glycine cleavage system T protein [Marivirga tractuosa DSM 4126] Length = 362 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 54/301 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ +Q + + D TL A+ + G I+ LI +I E+ ++ Sbjct: 51 SHMGEFLISGPKALDLIQKVFSNDASTLVVGKAQYGYLPNDNGGIVDDLLIYRIGEEEYM 110 Query: 67 LEIDRSKRDSLIDKLLF---------------YKLRS----NVIIEIQPINGVV-LSWNQ 106 L ++ S + + + + L + +Q + + LS + Sbjct: 111 LVVNASNIEKDWNWIAKQNEGFGAIMKDISDDFSLFAVQGPKAEDTLQKLTTAMDLSAIK 170 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD---IKTY------------------- 144 F + F D ++ I + G E + + Sbjct: 171 PFHFQVAPFADTKYVIMSNTGYTGAGGFEIYLHNKDAESVWRKILDAGEEFGIKPIGLGA 230 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D T P +A + TK +I E + + + + + RK Sbjct: 231 RDTLRMEMGFCLYGNDI-DDTTSPIEAKLGW--ATKFTKD-FINAEDLKKQKEQGVERKL 286 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256 +P G IL D IG + + + D + +A Sbjct: 287 IAFHMKDRGIPRKGYEILDMDGNTIGVVTSGTQSPTLGHGIGMGYVKTDFAKPETEIQIA 346 Query: 257 L 257 + Sbjct: 347 V 347 >gi|56697287|ref|YP_167653.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] gi|56679024|gb|AAV95690.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3] Length = 812 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 61/205 (29%), Gaps = 46/205 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G+ A FLQ T D+ LP + +L G I +++ D+F++ Sbjct: 493 LMVEGRDAEAFLQRACTNDMA-LPVGRVAYTLMLNDHGGIESDVTVARHGPDSFMVMSAI 551 Query: 72 SKRDSLIDKLL-----------FYKLRSNVIIEIQ-PINGVVLSWNQEHTFSNSSFI--- 116 S D L + ++ + P + +L+ + S+++F Sbjct: 552 SHTRRDRDHLRNLIRPDEDVRLRDATSAYAVLSLCGPKSRQILADVADIDLSDAAFPFNS 611 Query: 117 ------------DERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147 +R S L + + + + L Sbjct: 612 LARFHIGHAPVFAQRLSYTGDLGWEIFVTPDFAEHVFDVLMASGAPQGLRLVGGEALNAL 671 Query: 148 RINHGIVDPNTDFLPSTIFPHDALM 172 RI G D + PH + Sbjct: 672 RIEAGFAHWGHDMAYTEA-PHQVGL 695 >gi|83943009|ref|ZP_00955469.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp. EE-36] gi|83846017|gb|EAP83894.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp. EE-36] Length = 1005 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 85/275 (30%), Gaps = 58/275 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + + G ++ ++++I++DTF+ Sbjct: 672 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDDDTFL 731 Query: 67 LEIDRSKRDSLIDK-----------LLFYKLRSNVI----------------------IE 93 +S+ Y +NV ++ Sbjct: 732 CHTTTGGAESIHQHMEEWLQTEWWDFNVYV--ANVTEQYAQIAVVGPNARKCLEKLGGMD 789 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141 + + W + T R S + L W +D+ Sbjct: 790 VSKDALAFMEWA-DGTLGGFKCRVYRISFSGELSYEIAVDAGQGQAFWDALMVAGNDLGV 848 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + H LR G + + T+ P D ++ IS K Y+G+ R Sbjct: 849 MPYGTECLHILRAEKGFIMIGDE-TDGTVIPQDLGLNW--AISKKKDDYLGKRAQQRSHM 905 Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229 + R + + + TD LP + + E G Sbjct: 906 VDPTRWKLVGLETTDGSTLPDGAYAVGEGENENGQ 940 >gi|225873692|ref|YP_002755151.1| glycine cleavage system T protein [Acidobacterium capsulatum ATCC 51196] gi|254797863|sp|C1F933|GCST_ACIC5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|225792517|gb|ACO32607.1| glycine cleavage system T protein [Acidobacterium capsulatum ATCC 51196] Length = 378 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 107/318 (33%), Gaps = 65/318 (20%) Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I++ G A+ Q I D L A SA+L PQG + ++ K ++ Sbjct: 57 SHMGDIQLRGPGSLDAV---QHICMNDASKLAVGQAHYSAMLYPQGTFVDDVIVHKFSDN 113 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---------SS 114 +++ I+ R+ + + + + + L+ ++ Sbjct: 114 DYLIVINAGTREKDYEWIRSHAQPFHCHVSNYSDLYTQLAIQGPRAAETLAKLTSVDLAA 173 Query: 115 FIDERFSIADV------LLHRTWGHNEK-----IASDIKTYHELRINHGIVDPNTDF--- 160 + RF+ V L+ RT E I SD T R+ + +++ +F Sbjct: 174 IKNYRFTWGTVCNLHNTLIARTGYTGEDGFEIYIPSDEAT--SERVWNEVLEAGKEFGIV 231 Query: 161 ----------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + I +A +D L KG ++G E + ++ + Sbjct: 232 PCGLGARNTLRLESAMALYGHEISQDIDVFEAGLDRYC--KLDKGTFVGSEALKQVVAQG 289 Query: 199 IIRKRPMIITGTD-DLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHA 250 +++ + + D + G +L D +G + ALA + Sbjct: 290 GPKRKLVGLEMIDRGIARDGYRVLNDTQQAVGYVTSGSPAPFLKKNIALAYVPTELAT-- 347 Query: 251 IKKGMALTVHGVRVKASF 268 + + + + + VKA Sbjct: 348 LDREVFVEIRNNPVKARI 365 >gi|309812633|ref|ZP_07706377.1| aminomethyltransferase [Dermacoccus sp. Ellin185] gi|308433328|gb|EFP57216.1| aminomethyltransferase [Dermacoccus sp. Ellin185] Length = 367 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 95/295 (32%), Gaps = 45/295 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ F+ + +T D+ + A+ + G ++ ++ ED Sbjct: 54 SHLGKATVKGAGALDFVNSCLTNDLRKIGPGQAQYTMCCDESGGVVDDLIVYVKAEDDLF 113 Query: 67 LEIDRSKRDSLIDKL--------------LFYKL------RSNVIIE--IQPINGVVLSW 104 L + + ++ +L Y + +S+ ++ P++ +S+ Sbjct: 114 LIPNAANTAEVVRRLEEAAPEGIEVADAHEEYAVLAVQGPKSDEVVSALALPVDHDYMSF 173 Query: 105 NQEH------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------HELR 148 ++ T + + ER + + Y LR Sbjct: 174 DEADWQGRPVTVCRTGYTGERGYELVCRWDDALALWDALVEAAAPYEGLPCGLGARDTLR 233 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMII 207 G D I P A + K + G++ +++ + R R + + Sbjct: 234 TEMGYPLHGQDLSLD-ITPVQARSGW--AVGWKKDAFWGKDALTKEKAEGPRRISRGLKL 290 Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVH 260 TG +P + + + E+G + L + + V + +G + V Sbjct: 291 TGRG-IPRAHCIVRDAEGAELGEVTSGTFSPTLGMGVALALVSPMLAEGDQVVVD 344 >gi|303325422|ref|ZP_07355865.1| glycine cleavage system T protein [Desulfovibrio sp. 3_1_syn3] gi|302863338|gb|EFL86269.1| glycine cleavage system T protein [Desulfovibrio sp. 3_1_syn3] Length = 360 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 50/295 (16%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID-- 70 ++ G A L ++ ++ TL R +L +G +L +I + D F++ ++ Sbjct: 57 RIEGPGADEALSRAVSHNLATLAPGKCRYGFLLNAEGGVLDDCIIYRFGPDVFMIVVNAA 116 Query: 71 --RSKRDSLIDKL-------LFYKLRSNVIIEIQPINGVV-LSWNQ-----------EHT 109 +L ++L + + V ++ GV+ + N+ E T Sbjct: 117 CAAGDFAALRERLPQSVALTDLSAVTAKVDLQGPESVGVLEAALNENFHDLPYFGFRETT 176 Query: 110 FSNSSFIDERFSIADVL---LHRTWGHNEKIASD-----------IKTYHELRINHGIVD 155 F + + R L L+ W E + + LR+ G+ Sbjct: 177 FDGAPLLVSRTGYTGELGFELYLPWDKAEAFWTALLKDERVKPVGLGARDTLRLEAGLPL 236 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 D P +A M + + Y+G++ R +R+ + + Sbjct: 237 YGHDL-DDKHSPAEAGMGRMLTSTAD---YVGKDGAQR------VREVLVPLRIEGRRSA 286 Query: 216 SGSPILT--DDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKAS 267 +L E+G + +L + VD A + V R + + Sbjct: 287 RHGDVLALPGGPEVGRVTSGSFAPSLGCVIAFAWVDAAQAEHADFVVRTARSELA 341 >gi|189199812|ref|XP_001936243.1| dimethylglycine dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983342|gb|EDU48830.1| dimethylglycine dehydrogenase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 850 Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 59/274 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A+ LQ + T+DV + ++ G +L +S++EED F ++ + Sbjct: 515 EVSGPGAVHLLQRLTTSDVSK-QPGSITHTLLVNTHGGVLSDIFVSRLEEDVF--QVGAN 571 Query: 73 KRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWNQEH-----TFSNSSFIDE 118 L L R V +I + W T S+ F + Sbjct: 572 TATDLA-YLARQA-RGQVKHTPGEWAQVRDITGSTCCLGLWGPRARDVIQTVSSDDFSNR 629 Query: 119 RFSIADVL------------------------------LHRTWG-------HNEKIASDI 141 V R W + +A+ Sbjct: 630 GLPYMGVKKTSIAGVPVTIFRKSFVGEYGWEIQTTPEYGQRLWDILWQSGKPHGLVAAGR 689 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 ++ LRI GI +D P +A + + K ++G+ + + + R Sbjct: 690 AAFNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFVGKAALESLSKKAAPR 747 Query: 202 K-RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + R + + + P+ D G + Sbjct: 748 RLRCLTVDDGRSMVMGKEPVFVDGQRAGYITSAA 781 >gi|298373497|ref|ZP_06983486.1| glycine cleavage system T protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274549|gb|EFI16101.1| glycine cleavage system T protein [Bacteroidetes oral taxon 274 str. F0058] Length = 363 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 52/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A F+Q I + D+ +L A+ + + +G I+ ++ E++ ++L ++ + Sbjct: 57 VKGINATQFMQRICSNDIASLAVGRAQYNCLPNGKGGIVDDLIVYHYEDNKYMLVVNAAN 116 Query: 73 ---------------------------------KRDSLIDKLLFYKLRSNV------IIE 93 K ++ KL KL S++ + E Sbjct: 117 IEKDWAWVNANKIEGVEIENASDNIAQLAIQGPKATEVLQKLTPIKL-SDIPYYAFEVGE 175 Query: 94 IQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + V++S F + + + + LR+ Sbjct: 176 FAGVKDVIISNTGYTGAGGFELYFYPQHGQKIWDAIFEAGKEFDIKPIGLGARDTLRLEM 235 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G + T P +A + + + K G VS+ ++ + RK Sbjct: 236 GFCLYGHEI-DDTTSPIEAGLGWITKPAEGKNLIDGDLYVSQRKN-GVSRKLIGFEMKEK 293 Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P G + IG + L + + + + + V+ Sbjct: 294 AIPRQGYELTDGKGNIIGVVTSGCMSPTAKVGVGLGYVKPEFNKVGTEIAVLIRNKEVKA 353 Query: 265 KASFPH 270 + P Sbjct: 354 EVVKPP 359 >gi|126735829|ref|ZP_01751574.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. CCS2] gi|126715016|gb|EBA11882.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. CCS2] Length = 366 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 48/305 (15%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + D+ + I+ G +L + K+ ED + + I Sbjct: 64 VELRGPDAARLMQMLTPRDLRGMLPGQCYYVPIVDETGGMLNDPVALKLSEDRWWISIAD 123 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------RFSIAD 124 S + L Y R +V+++ ++ + + F D RFS D Sbjct: 124 SDLLFWVKALA-YGYRLDVLVDEPDVSPLAVQGPLAEDLMARVFGDAVRAIKFFRFSWFD 182 Query: 125 VLLHRTWGHN-------------EKIASDIKTYHEL------------------RINHGI 153 + + + ++ L RI G+ Sbjct: 183 FQGVSMAVARSGYSKQGGYEIYVDGTKNGMPLWNALMEAGKDLDVHAGCPNLVERIEAGL 242 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDD 212 + D PH+ + GC +G++ + R+ ++ R + I G Sbjct: 243 LSYGNDMNRENT-PHECGLGRFCSTQTAIGC-VGRDALLRVAKEGPTQQIRAIAIDGDIP 300 Query: 213 LPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 + PI+ +G + A+ + R+ D + Sbjct: 301 VCDQVWPIMAKGKRVGQVTSAAKSPDYNTNVAIGMVRMTHWDEGTALDVQTQDGLRAATV 360 Query: 267 SFPHW 271 W Sbjct: 361 HESFW 365 >gi|71278482|ref|YP_270503.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H] gi|71144222|gb|AAZ24695.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H] Length = 375 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 99/272 (36%), Gaps = 44/272 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ GK+A L+ ++ D++ LP R + QG +L ++S D Sbjct: 57 SHMGQLKLVGKNAAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVSNFG-DHLF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSS---FID 117 + ++ + + I + + L ++V IEI ++ + S+ F+D Sbjct: 116 VVVNAACKAQDIAHMQKH-LPADVEIEILEGRALLALQGPKAGEVLKRLLPESADMVFMD 174 Query: 118 ER---FSIADVLLHRTWGHNEK------------------IASDIKTY------HELRIN 150 R F+ A ++ R E +A + + LR+ Sbjct: 175 SRVVDFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVS-RIQHRNIIRKRPM 205 G+ D +T +L+ ++ I G + G +++ +I +++ RKR Sbjct: 235 SGLCLYGHDIDQTTTPVEASLLWAISKIRRTDGARAGGFPGADIILDQIATKDVARKRIG 294 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236 ++ G + EIG + Sbjct: 295 MVGLGKAPVREGIKLFNAQGDEIGVVTSGTAG 326 >gi|254243903|ref|ZP_04937225.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 2192] gi|126197281|gb|EAZ61344.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 2192] Length = 360 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|83954184|ref|ZP_00962904.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp. NAS-14.1] gi|83841221|gb|EAP80391.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp. NAS-14.1] Length = 1005 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 85/275 (30%), Gaps = 58/275 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + + G ++ ++++I++DTF+ Sbjct: 672 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDDDTFL 731 Query: 67 LEIDRSKRDSLIDK-----------LLFYKLRSNVI----------------------IE 93 +S+ Y +NV ++ Sbjct: 732 CHTTTGGAESIHQHMEEWLQTEWWDFNVYV--ANVTEQYAQIAVVGPNARKCLEKLGGMD 789 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141 + + W + T R S + L W +D+ Sbjct: 790 VSKDALAFMEWA-DGTLGGFKCRVYRISFSGELSYEIAVDAGQGQAFWDALMVAGNDLGV 848 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + H LR G + + T+ P D ++ IS K Y+G+ R Sbjct: 849 MPYGTECLHILRAEKGFIMIGDE-TDGTVIPQDLGLNW--AISKKKDDYLGKRAQQRSHM 905 Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229 + R + + + TD LP + + E G Sbjct: 906 VDPTRWKLVGLETTDGSTLPDGAYAVGEGENENGQ 940 >gi|325982513|ref|YP_004294915.1| Aminomethyltransferase [Nitrosomonas sp. AL212] gi|325532032|gb|ADZ26753.1| Aminomethyltransferase [Nitrosomonas sp. AL212] Length = 360 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 59/306 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEI- 69 + + G + FL+ ++ +V L A S +LTPQ I+ +I + E F + + Sbjct: 52 VDIKGDNVRDFLRRLVANNVDKLTLPGKALYSCMLTPQAGIIDDLIIYFLSETWFRIVVN 111 Query: 70 ----DRSKRDSLIDK--------------LLFYKL-----RSNV------------IIEI 94 D+ L + L + R+ V ++ Sbjct: 112 AGTADKDVAWMLKKRDEWAPNLEITPRRDLAMIAVQGPNARAKVWQVIPNSQSATEELKQ 171 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLL-HRTWGHNEKIASDIKTYHELRINHGI 153 V + ++ + AD + ++ + + LR+ G+ Sbjct: 172 FQSAVVGQYFIARTGYTGEDGFEIILPAADAPVFWKSLYAAGVAPAGLGARDTLRLEAGM 231 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH-----------RNIIRK 202 D T P ++ + + + +IG++++S R ++R Sbjct: 232 NLYGQDM-DETKNPLESGLAWTVDLKSERD-FIGKQILSDTVVTHQLVGLVLVDRGVLRS 289 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262 ++ D + SG I + +++A+ARI I + + V Sbjct: 290 HQQVVGQKDGVEYSG-EITSGG------FSPTMNQSIALARI-PAQITIGDEVDVIVRDK 341 Query: 263 RVKASF 268 +++A Sbjct: 342 KLRAKV 347 >gi|119483277|ref|ZP_01618691.1| aminomethyltransferase [Lyngbya sp. PCC 8106] gi|119458044|gb|EAW39166.1| aminomethyltransferase [Lyngbya sp. PCC 8106] Length = 391 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 89/301 (29%), Gaps = 53/301 (17%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILE----IDR 71 LQ ++ +D+ L A+ + +LT QG IL + ED ++ R Sbjct: 84 LQPLVPSDLSRLKPNQAQYTVLLTEQGGILDDIIFYYQGEDADTGTQRGVMIVNAATCSR 143 Query: 72 SKR---------DSLIDKLLFY-KLRS--------NVI-IEIQPINGVVLSWNQEHTFSN 112 K D ++ L Y L + + + + ++ + + T Sbjct: 144 DKAWISAQLEPTDITLEDLSKYQALMAVQGPQTLEKLQPLVTENLDSIPFFGHLNATVLG 203 Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 + R V L + + LR+ + D Sbjct: 204 HPALIARTGYTGEDGFEIMVAPEVAVQLWQRLLEAGVTPCGLGARDTLRLEAAMALYGQD 263 Query: 160 FLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218 T P +A + L I KG +IG+ ++ + + R+ + + G Sbjct: 264 LDT-TTTPLEAGLSWL--IHWDSKGDFIGRSILESQKTEGVSRRLVGLEMQGRHIARHGY 320 Query: 219 PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 P+ + IG + ALA D + + + +Y Sbjct: 321 PVKLNGEIIGEITSGTLSPTLGKAIALAYVPTDFARIGQSLDVEIRGKTYSAEVVKRPFY 380 Query: 273 K 273 + Sbjct: 381 R 381 >gi|15600408|ref|NP_253902.1| glycine cleavage system aminomethyltransferase T [Pseudomonas aeruginosa PAO1] gi|218894317|ref|YP_002443187.1| glycine cleavage system aminomethyltransferase T [Pseudomonas aeruginosa LESB58] gi|254238088|ref|ZP_04931411.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa C3719] gi|24636865|sp|Q9HTX5|GCST_PSEAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|9951522|gb|AAG08600.1|AE004934_7 glycine-cleavage system protein T1 [Pseudomonas aeruginosa PAO1] gi|126170019|gb|EAZ55530.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa C3719] gi|218774546|emb|CAW30363.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa LESB58] Length = 360 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|254577075|ref|XP_002494524.1| ZYRO0A03542p [Zygosaccharomyces rouxii] gi|238937413|emb|CAR25591.1| ZYRO0A03542p [Zygosaccharomyces rouxii] Length = 413 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 56/279 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK A+ FL + D L + S +L P G I+ LI+K F + + + Sbjct: 92 TLQGKDAVNFLHKVTPTDFQQLHPGVGTLSVLLNPNGGIVDDTLITKQSAHDFYMVTNAA 151 Query: 73 KRDS----LIDKLL----------------------FYKLRSNVIIEIQPINGVVLSWNQ 106 + L+D+L +++ +V+ Q + + + Sbjct: 152 CAERDSQFLVDELKSVADAKWTPITDRSLLALQGPDAHRVLQHVLAWDQSLADLYFGQRR 211 Query: 107 EHTFSNSSFID-ERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRINH 151 + N ++ID R NE + LR+ Sbjct: 212 SYKLFNGAYIDVARSGYTGEDGFEVSIPNEDALQFAQSLLDNEMTKPIGLAARDSLRLEA 271 Query: 152 GIVDPNTDFLPSTIFPHDALM---------DLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 G+ + +I P +A + ++ G+ I ++ ++ + Sbjct: 272 GLCLYGHEL-DESITPVEAALSWVISKSRRNITEGVKFNGYDKIIDQINNKTHKSLRV-- 328 Query: 203 RPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVGKKAL 239 +GS I D E+G + +L Sbjct: 329 -GYRYQTKGPAARTGSKIFLPDGKTEVGHVTSGSASPSL 366 >gi|194291148|ref|YP_002007055.1| glycine cleavage system aminomethyltransferase t [Cupriavidus taiwanensis LMG 19424] gi|238692785|sp|B3R7J7|GCST_CUPTR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|193224983|emb|CAQ70994.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Cupriavidus taiwanensis LMG 19424] Length = 375 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G + FL+ ++ +V L A S +L G ++ ++ ED F Sbjct: 51 SHMCVVDLAGPNTRAFLRGLLANNVDKLQTPGKALYSCMLDEHGGVIDDLIVYFFAEDRF 110 Query: 66 ILEIDRSKR 74 L ++ Sbjct: 111 RLVVNAGTA 119 >gi|209809288|ref|YP_002264826.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238] gi|208010850|emb|CAQ81250.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238] Length = 372 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 110/313 (35%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+A++ D++ LP + R + +G I+ +++ D Sbjct: 54 SHMGQLRLKGDGAAAALEALVPVDIIDLPSQKQRYAFFTNEEGGIMDDLMVANFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117 + ++ + ++ I L + L +V +E+ ++ + +N F+D Sbjct: 113 VVVNAACKEQDIAHLQAH-LPKDVELEVIEDRALLALQGPKAADVLSRLQPAVANMLFMD 171 Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150 R + N+K A +T + LR+ Sbjct: 172 SITIDINGIECYVSRSGYTGEDGYEVSVPNDKAAELAETLTSFEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202 G+ D T P +A + L GIS + G + G +++ + I+ +++ RK Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWGISKNRRADGERAGGFPGADIILKQIETKDVNRK 288 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255 R ++ T G + +D EIG + ++ R D + Sbjct: 289 RVGLVGQTKAPVREGCKLFDANDTEIGVITSGTAGPTAGKPVSMGYLRTDLAVIGTEVFA 348 Query: 256 ALTVHGVRVKASF 268 + + + Sbjct: 349 EVRGKKLAMTVEK 361 >gi|13471020|ref|NP_102589.1| glycine cleavage system aminomethyltransferase T [Mesorhizobium loti MAFF303099] gi|14021764|dbj|BAB48375.1| glycine cleavage system protein T [Mesorhizobium loti MAFF303099] Length = 366 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 37/261 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ L D L ++ S L G IL +++++ + F+ Sbjct: 55 SHMKLFEVSGPQAVALLNRACPLDAGALEISQSKLSFFLNEAGGILDDLIVTRLGDTRFM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 + + + L +L +N ++++P++ V L+ ++ S Sbjct: 115 VVANAGNAVADEKHLR--ELATNFDVKVEPLDRVFLAIQGPEAWAALSRAGIETGSLLFM 172 Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152 ++ R AD L+ + + + LR+ G Sbjct: 173 HGVEPRKDWFMSRSGYTGEDGFEIGLPEADARDLVAKLLEDERVLWIGLAARDSLRLEAG 232 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D P T ALM + G +IG + + R +KR + Sbjct: 233 LCLHGQDITPETDPAAAALMWAIPRDIRASGAFIGADALRAAVERGPAQKRVGLKPEGRQ 292 Query: 213 LPPSGSPIL-TDDIEIGTLGV 232 +G + D G + Sbjct: 293 PVRAGVALFDADGNPAGHVTS 313 >gi|313110284|ref|ZP_07796177.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 39016] gi|310882679|gb|EFQ41273.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 39016] Length = 360 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E+ + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-ENGY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALDAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|49086384|gb|AAT51348.1| PA5215 [synthetic construct] Length = 361 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 + ++ S RD I + V ++ + ++ +S + + Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168 Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149 D + RT E + + LR+ Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D ++ P A M ++G+ + + K ++ Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + I G + K++A+AR+ + + + V+ Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPS 351 >gi|326330107|ref|ZP_08196419.1| glycine cleavage system T protein [Nocardioidaceae bacterium Broad-1] gi|325952117|gb|EGD44145.1| glycine cleavage system T protein [Nocardioidaceae bacterium Broad-1] Length = 374 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 81/271 (29%), Gaps = 48/271 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTF 65 S+ + + G+ A F+ A T D+ + A+ + G I+ + +++ Sbjct: 55 SHLGKVMISGQGAAEFVNASFTNDLGRIKPGKAQYTLCCDEETGGIVDDLIAYYRDDEHV 114 Query: 66 ILEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQ----PINGVVLSWNQEHTFSN 112 ++ + + ++ +L R ++ +Q + H + + Sbjct: 115 LIVPNAANTPEVVRRLQAAAPAGITLTDHHRDYAVLAVQGPKSDELLEAVGLPAGHEYMS 174 Query: 113 SSFIDERFSIADVL----------LHRTWGHNEKIASDIKTYHE---------------- 146 R + D + R + + + Sbjct: 175 FVEAAARDVLGDEIGVVVCRSGYSGERGYELIVANEAAEALWDALLSRGEALGALPCGLG 234 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G D + P++A + + K + G++ + + R Sbjct: 235 ARDTLRTEMGYPLHGQDITLD-VTPNEAGLGW--AVGWKKDAFWGRDKLVAEKEAGPKRA 291 Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 R ++ G P + LT D+ +G + Sbjct: 292 LRGIVAVGRGIPRPHMTASLTADVPVGEVTS 322 >gi|297154966|gb|ADI04678.1| sarcosine oxidase alpha subunit family protein [Streptomyces bingchenggensis BCW-1] Length = 981 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A FL I T L +AR + P G I + ++EE+ + Sbjct: 644 STLGKIEIWGADAGEFLNRIYTNAFKKLAPGLARYGVMCKPDGMIFDDGVTLRLEENRYF 703 Query: 67 LEIDRSKRDSLIDKL 81 + S +++D L Sbjct: 704 MTTTTSGAAAVLDWL 718 >gi|262274203|ref|ZP_06052015.1| aminomethyltransferase (glycine cleavage system T protein) [Grimontia hollisae CIP 101886] gi|262222013|gb|EEY73326.1| aminomethyltransferase (glycine cleavage system T protein) [Grimontia hollisae CIP 101886] Length = 372 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 94/270 (34%), Gaps = 48/270 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L+A++ D++ LP R + QG ++ +++ D Sbjct: 54 SHMGQLRLHGENAAKALEALVPVDIIDLPVGKQRYALFTNEQGGLMDDLMVTNFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121 + ++ + + I L L ++V +E + + +L+ + + ++ + Sbjct: 113 VVVNAACKAQDIAHLRA-NLPADVELE-EVEDRALLALQGPKAAAVLATLNPAVADMVFM 170 Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149 A+ R E + LR+ Sbjct: 171 DAEKIELAGIECLVSRSGYTGEDGYEISVPANKAEEFARRLLIKEEVEWIGLGARDSLRL 230 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVS-RIQHRNIIRKR 203 G+ D T P +A + G + G +++ +I +++ RKR Sbjct: 231 ECGLCLYGHDI-DQTTTPVEASLLWAISKPRRADGERAGGFPGADIILDQIATKDVSRKR 289 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ + G+ + DD EIG + Sbjct: 290 VGLLGMSKAPVREGAVLFDADDNEIGVVTS 319 >gi|260466549|ref|ZP_05812738.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259029698|gb|EEW30985.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 817 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 54/278 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68 ++ G A L I DV P + +L +G I ++++ E+TF + Sbjct: 496 ELSGPDAAKALDWICANDVSK-PAGRLTYTQLLNTRGGIEADLTVARLAEETFYIVTGTG 554 Query: 69 ----------------IDRSKRD--SLIDKLLFYKLRS-NVIIEIQPINGVVLSWN---- 105 +D + D L R+ +V+ ++ + ++ Sbjct: 555 FRTHDASWISDHIGEGLDATLADVTEDFGTLSLMGPRARDVLADVTDADVSNAAFPFGHV 614 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELR 148 +E + + R + L + LR Sbjct: 615 REIAIAGHTVRALRVTYVGELGWELHVPIAATGEVFDALMTAGKRHGIRPVGYRALESLR 674 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + G D P+ P +A + + L K ++G+ + + ++KR Sbjct: 675 LEKGYRAWGADITPNDT-PQEAGLGW--AVKLRKNTDFVGRRALEKANGT-ALKKRFAGF 730 Query: 208 TGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 T D + IL + +G L G + + Sbjct: 731 TVDDPDIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 766 >gi|120402214|ref|YP_952043.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] gi|119955032|gb|ABM12037.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] Length = 752 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 91/293 (31%), Gaps = 57/293 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A LQA +T DV L SA+ T G ++ + ++ ++ F Sbjct: 421 LSALRKFEVLGPDAEELLQATLTRDVRRLSRGQVVYSAMCTEAGGVVDDCTVLRLGDNNF 480 Query: 66 ILE----IDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFS 111 D + ++L ++ V L W+ + Sbjct: 481 RFIGGDPYDGIWLRTQAERLGLGQVWIKDSSDHMHNLAVQGPSSRELLCELIWSPPGQPA 540 Query: 112 ------------------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY-- 144 + R L + W H +++ + Y Sbjct: 541 LRDLGWFRFLIGRLDGPEGPPLLVSRTGYTGELGYELWIHPNDAETLWDRVWEAGQAYGL 600 Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 LR+ G+V +F T P +A + + ++G++ + I+ Sbjct: 601 APLGLEALELLRVESGLVAAGHEFDEQTD-PFEAGIGFTVPLKSKSDDFVGRD--ALIER 657 Query: 197 RNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 + ++ + + ++ G + ++G + + +A+ RI Sbjct: 658 KAHPQRALVGLRLDGNEVAAHGDCVHIGRSQVGVVTSGIRSPVLGAGIALCRI 710 >gi|332292910|ref|YP_004431519.1| glycine cleavage system T protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170996|gb|AEE20251.1| glycine cleavage system T protein [Krokinobacter diaphorus 4H-3-7-5] Length = 363 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G++A+ LQ + + DV + A+ + G I+ ++ +I+ED ++ Sbjct: 49 SHMGEFLVSGENALSLLQWVCSNDVSKINVGGAQYNCFPNDTGGIVDDLIVYRIKEDQYM 108 Query: 67 LEIDRSKRD 75 L ++ S D Sbjct: 109 LVVNASNID 117 >gi|119963904|ref|YP_949507.1| sarcosine oxidase alpha subunit [Arthrobacter aurescens TC1] gi|119950763|gb|ABM09674.1| sarcosine oxidase alpha subunit [Arthrobacter aurescens TC1] Length = 981 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 91/305 (29%), Gaps = 72/305 (23%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I++ GK A FL + T L AR + T G I + ++ Sbjct: 637 MDATTL---GKIEIRGKDAGEFLNRVYTNAFKKLAPGSARYGVMCTLDGMIFDDGVTLRL 693 Query: 61 EEDTFILEIDRSKRDSLIDKL------------------------------LFYKLRSNV 90 +ED + + ++D L + + V Sbjct: 694 DEDRYFMTTTTGGAAKVLDWLEEWHQTEWPELDVVCTSVTEQWSTIAVVGPKSRAVIAKV 753 Query: 91 IIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134 ++ G+ ++ + S R S + L + TW Sbjct: 754 APQLAENGGLEAENFPFMTFRETTLASGVQARVCRISFSGELAYEINIPSWYGLNTWEAV 813 Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 ++ +T H LR G D T+ P DA MD + +S K +IG Sbjct: 814 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMDWI--VSKAKD-FIG 869 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEI----------GTLGVVVG 235 + R RK + + D P G+ ++ I + G + Sbjct: 870 KRSYLRQDASREDRKHLVSVLPVDHSLRLPEGTQLVEKGIPVNPANGPVRMEGFVTSSYH 929 Query: 236 KKALA 240 AL Sbjct: 930 SAALG 934 >gi|78185799|ref|YP_378233.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. CC9902] gi|123580950|sp|Q3AVT0|GCST_SYNS9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|78170093|gb|ABB27190.1| Glycine cleavage system T protein [Synechococcus sp. CC9902] Length = 365 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 52/304 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62 S+ +++ G + LQ ++ +D+ + A + +L QG I +I + Sbjct: 49 SHMGVLRLEGANPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDLIIYDLGAIDEK 108 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117 +L I+ + DS + + + + NGV+L+ + Sbjct: 109 RGALVLVINAACADSDTAWIRERMEPAGLTVTDIKNNGVLLALQGPQAIPLLEQLSGEDL 168 Query: 118 ---ERFSIADV--------------------------------LLHRTWGHNEKIASDIK 142 RF D+ LL + Sbjct: 169 SGLPRFGHRDLQIQGLSNSVFTARTGYTGEDGAELLLTAEDGQLLWSQLLEKGVAPCGLG 228 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ + D + P +A + L + + +IG++ + R K Sbjct: 229 ARDTLRLEAAMHLYGQDM-NADTNPFEAGLGWLVHLEMPAD-FIGRQALERAAETG-PNK 285 Query: 203 RPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL 257 R + + P+L + +G + L A+A I + +++ Sbjct: 286 RLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSV 345 Query: 258 TVHG 261 + G Sbjct: 346 EIRG 349 >gi|182435838|ref|YP_001823557.1| glycine cleavage system aminomethyltransferase T [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464354|dbj|BAG18874.1| putative glycine cleavage system protein T [Streptomyces griseus subsp. griseus NBRC 13350] Length = 371 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E Sbjct: 52 LSHMGEITVTGPEAAAFLSYALVGN-IATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93 +++ + ++D L Y L + + + Sbjct: 111 YMVVANAGNAQIVLDALTERVSGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170 Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143 + + ++ F+ + L + I + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWRALTEAGAPHGLIPCGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + + + P DA + + + K G ++G+ ++ R Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTAAAERAETAP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 RK +I +P +G ++ D IG + + +A+A +D A Sbjct: 288 PRKLVGLIAEGRRVPRAGFAVVADGKVIGEVTSGAPSPTLGRPIAMAYVDAAFAA 342 >gi|103487355|ref|YP_616916.1| glycine cleavage system aminomethyltransferase T [Sphingopyxis alaskensis RB2256] gi|98977432|gb|ABF53583.1| glycine cleavage system T protein [Sphingopyxis alaskensis RB2256] Length = 374 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 44/265 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G+ L+ ++ D+ L R S +L +G +L +I+ E D F Sbjct: 59 SHMGQLALSGEGVAKALETLVPGDISALKPGRMRYSLLLNDEGGVLDDLMITN-EGDQFG 117 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106 + ++ + + I L + L ++ + G++ Sbjct: 118 IVVNGAVKWDDIAHLREH-LPDDITLNHNEDYGLLALQGPKAVTALARLVPEAADLVFMQ 176 Query: 107 --EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRIN 150 T++ + R N+ + S LR+ Sbjct: 177 AMPATWNGHAIAISRSGYTGEDGFEISLPNDALESFADALCAMEEVKPIGLGARDSLRLE 236 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMII 207 G+ D +I P +A DL IS + G + G + RKR ++ Sbjct: 237 AGLPLYGHDL-DESIDPVEA--DLAFAISKRRREEGGFPGAARILGHLADGSPRKRVGLV 293 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV 232 G+ + + EIG + Sbjct: 294 IDGKLPVREGAKLFDGNTEIGVVTS 318 >gi|187731813|ref|YP_001881675.1| glycine cleavage system aminomethyltransferase T [Shigella boydii CDC 3083-94] gi|238691769|sp|B2U0S2|GCST_SHIB3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|187428805|gb|ACD08079.1| glycine cleavage system T protein [Shigella boydii CDC 3083-94] Length = 364 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|68473286|ref|XP_719201.1| hypothetical protein CaO19.12965 [Candida albicans SC5314] gi|46441008|gb|EAL00308.1| hypothetical protein CaO19.12965 [Candida albicans SC5314] gi|238883115|gb|EEQ46753.1| hypothetical protein CAWG_05118 [Candida albicans WO-1] Length = 394 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK A LQ I D+ LP + S +L G ++ +I+K ED + + + Sbjct: 73 ISGKDAQNLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNAGC 132 Query: 74 RDSLIDKLL 82 R+ + + Sbjct: 133 REKDVKFIK 141 >gi|146103743|ref|XP_001469634.1| aminomethyltransferase, mitochondrial precursor [Leishmania infantum] gi|134074004|emb|CAM72744.1| putative glycine synthase [Leishmania infantum JPCM5] gi|322503751|emb|CBZ38837.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 377 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G F++ + D+ + + QG I +++++ D Sbjct: 55 SHMGQYEVRGADREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTRMA-DHLF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFID---- 117 L ++ ++ + + LR +++ P++ +++ + S F+D Sbjct: 114 LVLNAGCKEKDVAHMER-VLREGAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPD 172 Query: 118 -------ERFSIADVLLHRT-------------------------WGHNEKIASDIKTYH 145 +R SI + + T + + Sbjct: 173 MGFMQCRQRVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMSRKAEMIGLGARD 232 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQ---HRNI 199 LR+ G+ + I P A + IS + G +IG E + + + Sbjct: 233 SLRLEAGLNLYGHELT-EDINPVAARF--MWAISKRRMAEGGFIGYEPIKYFRDNASKGA 289 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 + + + + T + + I +G + L AI +D+ + Sbjct: 290 VPRLRVGLVSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKV 349 Query: 256 ALTVHGVRVKASF 268 L V G RV A Sbjct: 350 DLVVRGRRVAAEV 362 >gi|116695891|ref|YP_841467.1| glycine cleavage system T protein [Ralstonia eutropha H16] gi|113530390|emb|CAJ96737.1| glycine cleavage system T protein [Ralstonia eutropha H16] Length = 831 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 62/299 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 V G A LQ +++ DV +P +A+L +G ++++ D ++L Sbjct: 500 VKGADAEAVLQYVMSNDVA-VPPGQTVYTAMLNDRGTYESDLTVTRLAHDQYLLVTGSAQ 558 Query: 69 -----------IDRSKRDSLIDKLLFYKL------RSN-----VIIEIQPINGVVLSWNQ 106 I KR +++D Y + RS V ++ Sbjct: 559 TTRDFNYIERLIPADKRCAIVDVTGQYAVLAVMGPRSRELLQSVSRTDFSNQAFPFGTSK 618 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149 E ++ R + L + E T HE LRI Sbjct: 619 EIDLGYATVRATRLTYVGELGWELYVPVEFAVGVHDTLHEAGKRFGLVNAGYYAIESLRI 678 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRPMI 206 G + + I P +A + ++ + G+E + +++ +R+R + Sbjct: 679 EKGYRAWSRELTTD-IHPFEAGLSFACKLNTDIP-FRGREALLKLRAAGGAAQVRRRVAV 736 Query: 207 ITGTDDLPP---SGSPILTDD-----IEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 +T G IL G + L + + + D Sbjct: 737 VTLDGASEAMLWGGEAILRTAPDGTVRPAGFVTSAAFGHTLGCPVGMGLLARADGPADA 795 >gi|260461580|ref|ZP_05809827.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] gi|259032650|gb|EEW33914.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium opportunistum WSM2075] Length = 409 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 80/271 (29%), Gaps = 57/271 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A FL + DV L +A G +L + ++ F L Sbjct: 78 RIEGPDAEAFLDRVTLRDVTKLKPGRVHYTAWCDDAGFVLDDGTLFRLSPTRFRLCSQER 137 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111 L+D + + V +E + L+ +F+ Sbjct: 138 HLPWLLDSAIGFS----VTVEEETEAVAGLALQGPTSFAVLRDAGFVGVEKLKVFDLTDF 193 Query: 112 ---NSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELRINH 151 + R L + + +K S + R+ Sbjct: 194 PHDGGAVNISRTGFTGDLGYELFVPADKALSLWDRLMAAGELRGIRAIGYTALNRARLEA 253 Query: 152 GIVDPNTDFLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G++ N DF + P + +D + I KG + G+ + + + +R Sbjct: 254 GLIVANADFTTAEHAIRADRLRMPDEIGLDFM--IDPEKGHFNGRRAILEARAKRRLRHV 311 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + + ++P + + + +G+V Sbjct: 312 LVGLEIEGNVPAEHAIVYH--KKSQEVGLVS 340 >gi|134101025|ref|YP_001106686.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] gi|291009417|ref|ZP_06567390.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] gi|133913648|emb|CAM03761.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Saccharopolyspora erythraea NRRL 2338] Length = 947 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 90/292 (30%), Gaps = 59/292 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + G + + + E+ ++ Sbjct: 613 STLGKIDVQGPDAAEFLDLVYTNKMSTLKVGRIRYGLMCHADGMVFDDGTVMRTGENRYL 672 Query: 67 LEIDRSKRDSLID-----------KLLFY-----------KL---RSNVII-------EI 94 + ++ L + L RS ++ ++ Sbjct: 673 ISTTSGGAAGVLQWLEDWLQTEWPHLRVHLTSVTEQWATIALVGPRSREVLARVASEMDL 732 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL---LHRTWGHNEKIASDI---------- 141 + ++W + + R S + L ++ W H ++ + Sbjct: 733 DNDDFPFMAWQDGSVAGQRARV-CRISFSGELAFEINVPWWHGREVWDALIDAGAPFGIT 791 Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G D T+ PHD M +S K ++G SR Sbjct: 792 PYGTETMHVLRAEKGFPIVGQD-TDGTVTPHDLGMSW--AVSKKKDDFLGMRSFSRADTS 848 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDI----EIGTLGVVVGKKALAIAR 243 RK + + D+ + G+ ++ + LG V A+ R Sbjct: 849 RTDRKHLVGLLPADEDLVLEEGAQLVEHSELPQPPVPMLGHVTSSYRSAVLR 900 >gi|328351619|emb|CCA38018.1| aminomethyltransferase [Pichia pastoris CBS 7435] Length = 391 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G SA FLQ I +D+ L + S +L QG ++ +I+K +E+ F + + Sbjct: 71 RVKGNSAAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAG 130 Query: 73 KRD 75 RD Sbjct: 131 CRD 133 >gi|260944506|ref|XP_002616551.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720] gi|238850200|gb|EEQ39664.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720] Length = 364 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A+ FLQ I D+ L + S +L +G I+ +I+K ED F + + Sbjct: 70 RFHGADAVKFLQKITPIDLSQLQPFTSSLSVLLNNEGGIIDDTIITKHGEDKFYMVTNAG 129 Query: 73 KRD 75 R+ Sbjct: 130 CRE 132 >gi|254569542|ref|XP_002491881.1| hypothetical protein [Pichia pastoris GS115] gi|238031678|emb|CAY69601.1| hypothetical protein PAS_chr2-2_0492 [Pichia pastoris GS115] Length = 392 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G SA FLQ I +D+ L + S +L QG ++ +I+K +E+ F + + Sbjct: 72 RVKGNSAAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAG 131 Query: 73 KRD 75 RD Sbjct: 132 CRD 134 >gi|74024930|ref|XP_829031.1| aminomethyltransferase [Trypanosoma brucei TREU927] gi|70834417|gb|EAN79919.1| aminomethyltransferase, putative [Trypanosoma brucei] Length = 375 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 111/310 (35%), Gaps = 49/310 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G FL+ + + +P A + L + + ++++ +D + Sbjct: 54 SHFGVVEVFGADREKFLEWLTPSAPSRMPSGKAALTMFLNDRAGVKDDCIVTRY-DDRLV 112 Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEH---------------- 108 + ++ +D +I + +V +E++ V + + Sbjct: 113 VVVNAGCKDKMIAYMRQSVADFTGDVALEMEDRAIVTVQGPKAASALAPHVEGLDKLLFM 172 Query: 109 --------------TFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147 T + S+ E R A ++ + + A+ + L Sbjct: 173 QGRQDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRP 204 R G+ + + M + +T+G ++G E ++++ + + R R Sbjct: 233 RTEAGLNLYSHELSEDIDPVAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRV 292 Query: 205 MIITGT--DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 I+ +P +G+P+L + +G + V + +A+ +D+ I + + L Sbjct: 293 GILAAPERGPIPRNGTPVLVEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLD 352 Query: 259 VHGVRVKASF 268 V G VKA Sbjct: 353 VRGKLVKAEI 362 >gi|108803605|ref|YP_643542.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941] gi|108764848|gb|ABG03730.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941] Length = 812 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 52/275 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67 +V G A+ FLQ + T + P + +L P+G + +++I ED F L Sbjct: 500 EVGGPGALAFLQRMTTGQLDR-PVGSVTYTLMLDPKGGVRSDITVARISEDLFRLGLNGP 558 Query: 68 --------EIDRS--------------------KRDSLIDKLL----------FYKLRSN 89 + + L+ L F++ R Sbjct: 559 QDIAWLEGHLPEDGSVWLRDISGGTCCVGVWGPQARELVQSLSPDDLSNEAFGFFQARR- 617 Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + + P+ + +S+ E + + D + D LL+ G I + + LR+ Sbjct: 618 IHVGEVPVLALRVSYVGELGWELYASADMGLRLWD-LLYEAGGPLGVIPAGRGAFEGLRL 676 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G D P++A + + KG +IG+E V R + R+ ++ Sbjct: 677 EKGYRMWGVDVTTEHD-PYEAGLGF--AVKPEKGEFIGREAVLRRREEGPRRRLCCLLLD 733 Query: 210 TDDLPPSGS-PILTDDIEIGTLGVVVGKKALAIAR 243 GS P+ + +G + +I R Sbjct: 734 DPRAVVMGSEPVYAEGRSVGYVTSA--GYGYSIGR 766 >gi|59713883|ref|YP_206658.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Vibrio fischeri ES114] gi|59482131|gb|AAW87770.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Vibrio fischeri ES114] Length = 372 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 111/313 (35%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK+A L+A++ D++ LP + R + G I+ +++ D Sbjct: 54 SHMGQLRLKGKNAAAALEALVPVDIIDLPSQKQRYAFFTNDNGGIMDDLMVANFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117 + ++ + ++ I L+ L S+V IE+ ++ + SN F+D Sbjct: 113 VVVNAACKEQDIAHLVA-NLPSDVEIEVIEDRALLALQGPQAADVLSRLQPSVSNMLFMD 171 Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150 R + N+K A +T + LR+ Sbjct: 172 TAVVEISGIECYVSRSGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202 G+ D T P +A + L IS + + G +V+ + I+ +++ RK Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWAISKNRRADGERVAGFPGADVILKQIETKDVNRK 288 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255 R ++ T G + DD EIG + ++A R D + Sbjct: 289 RVGLVGQTKAPVREGCKLYDADDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFA 348 Query: 256 ALTVHGVRVKASF 268 + + + Sbjct: 349 DVRGKKLPMTVEK 361 >gi|257093544|ref|YP_003167185.1| glycine cleavage system T protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046068|gb|ACV35256.1| glycine cleavage system T protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 362 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A PFL+ ++ ++ L A SA+L G +L ++ ++E + Sbjct: 49 SHMCAVDLDGPDARPFLRRLLANNIDKLQLPGKALYSAMLNEGGGVLDDLIVYYLDETHY 108 Query: 66 ILEIDRSKR 74 + ++ Sbjct: 109 RIVVNAGTA 117 >gi|331678893|ref|ZP_08379567.1| glycine cleavage system T protein [Escherichia coli H591] gi|331073723|gb|EGI45044.1| glycine cleavage system T protein [Escherichia coli H591] Length = 418 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 104 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 163 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 164 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 213 >gi|300815642|ref|ZP_07095866.1| glycine cleavage system T protein [Escherichia coli MS 107-1] gi|300820710|ref|ZP_07100861.1| glycine cleavage system T protein [Escherichia coli MS 119-7] gi|300921239|ref|ZP_07137611.1| glycine cleavage system T protein [Escherichia coli MS 115-1] gi|300928157|ref|ZP_07143700.1| glycine cleavage system T protein [Escherichia coli MS 187-1] gi|301327309|ref|ZP_07220563.1| glycine cleavage system T protein [Escherichia coli MS 78-1] gi|300411781|gb|EFJ95091.1| glycine cleavage system T protein [Escherichia coli MS 115-1] gi|300463848|gb|EFK27341.1| glycine cleavage system T protein [Escherichia coli MS 187-1] gi|300526974|gb|EFK48043.1| glycine cleavage system T protein [Escherichia coli MS 119-7] gi|300531571|gb|EFK52633.1| glycine cleavage system T protein [Escherichia coli MS 107-1] gi|300846095|gb|EFK73855.1| glycine cleavage system T protein [Escherichia coli MS 78-1] gi|324017273|gb|EGB86492.1| glycine cleavage system T protein [Escherichia coli MS 117-3] Length = 417 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 103 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 162 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 163 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 212 >gi|254456244|ref|ZP_05069673.1| glycine cleavage T protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083246|gb|EDZ60672.1| glycine cleavage T protein [Candidatus Pelagibacter sp. HTCC7211] Length = 380 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 99/291 (34%), Gaps = 64/291 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F+Q + D+ L + I G IL ++ ++ E+ F L + Sbjct: 66 VEITGPDAYKFIQLLTPRDLSKLAIGQCKYVLITNNDGGILNDPVLLRLAENHFWLSLAD 125 Query: 72 S------------------KRDSLIDKLL---------FYKLRSNVIIEIQPINGVVLSW 104 S ++ + L KL + I + W Sbjct: 126 SDVLLWAQGVAVNSGLNVQIKEPDVSPLQLQGPNSGEIMVKLFG------EGIRELKYYW 179 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------- 147 +E+ I R + L + + + +++ Y ++ Sbjct: 180 LREYDLDGIPLIVSRTGWSSELGYEIYLRDGSKGNEL--YEKIMEAGKTHGLQPGHTSSI 237 Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 RI G++ + D +T P + +D L + ++G++ + +I+ I RK+ I Sbjct: 238 RRIEGGMLSYHADADINT-NPFELGLDRLVNLDADIN-FVGKDALKKIKQDGIKRKQIGI 295 Query: 207 ITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 + L + + D+ IG + V ALA+ I + + Sbjct: 296 EIDCEPLKGPNTTFWELQKDNKIIGKVTSAVYSPRLKKNIALAMVEIQQTE 346 >gi|218438624|ref|YP_002376953.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp. PCC 7424] gi|218171352|gb|ACK70085.1| glycine cleavage system T protein [Cyanothece sp. PCC 7424] Length = 381 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 85/281 (30%), Gaps = 49/281 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------QG----- 49 S+ GK I LQ ++ +++ L A+ + +L P QG Sbjct: 59 SHMGKFVFQGKEIIKQLQGLVPSNLSRLKPGQAQYTVLLNPDAGIIDDIIIYYQGETTEG 118 Query: 50 ----KILLYF---------LISKIEEDTF----------ILEIDRSKRDSLID-----KL 81 +++ ++ + ++ ++ + ++ + L Sbjct: 119 EQQVTMIVNAATTDKDKTWILDHLSSESIQFEDLSQQKALIAVQGISAETFLQTFVKENL 178 Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 KL ++ I G + +D L R + Sbjct: 179 SQVKLFEHLNATILEQPGFIARTGYTGEDGFEVMVDPDI---GQQLWRKLSELGVTPCGL 235 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ + D T P +A + L + K +IG+ V+ + + + + R Sbjct: 236 GARDTLRLEASLALYGQDI-DETTTPLEAGLGWLVHLKTLKDNFIGRAVLEQQKAQGVTR 294 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242 + + G P+++ +G + L +A Sbjct: 295 CLVGLQMEGRHIARHGYPVISKGKTVGEVTSGTISPTLGVA 335 >gi|317153275|ref|YP_004121323.1| glycine cleavage system T protein [Desulfovibrio aespoeensis Aspo-2] gi|316943526|gb|ADU62577.1| glycine cleavage system T protein [Desulfovibrio aespoeensis Aspo-2] Length = 360 Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 91/285 (31%), Gaps = 57/285 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G A+ L +++ D+ TL R +L G I+ +I + ED ++L ++ + Sbjct: 58 KLAGPGAMNALNTVVSHDLTTLGPGKCRYGFLLNASGGIIDDLIIYCLAEDEYMLVVNGA 117 Query: 73 KRDSLIDKLLFYKL----RSNV-----IIEIQPINGVVLS-------WN-------QEHT 109 RD ++ L +++ I++Q + + WN + Sbjct: 118 CRDKDFSQIKANLLGGLSFTDISDETGKIDVQGPESLDVINALTGRKWNELKYFNFEATD 177 Query: 110 FSNSSFIDERFSIADVLLHRTWGHN-------EKIASD-------IKTYHELRINHGIVD 155 + R L + + EK+A+D + LR+ G Sbjct: 178 CLGFPMLISRTGYTGELGYELYLPADKALAVWEKLAADTRVEPVGLGARDTLRLEIGYPL 237 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D P +A G L K YIG+ + +R+ + + Sbjct: 238 YGQDLDDEHT-PVEAGA----GFFLKKETDYIGRAGL------GTVRQMLVPLAIEGRRT 286 Query: 215 PS--GSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAI 251 L + G + ALA R + + + Sbjct: 287 ARHYDEVFLPSGEKTGVVTSGSFAPSLGHCVALAYVRAEDAEKDL 331 >gi|326565028|gb|EGE15228.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis 103P14B1] gi|326574135|gb|EGE24083.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis 101P30B1] Length = 366 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 94/288 (32%), Gaps = 61/288 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118 + + + + R+ + V + + P + V L+ + + + Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLAVKP 165 Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141 + V L W + Sbjct: 166 EWTDKVNALKPFVGVDLGDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D + P +A M + ++G+ + +++ + Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKDENRDFVGKSALIALKNDGVKM 284 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIAR 243 ++ ++ + +G ++T+D G G +++AIAR Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIAR 329 >gi|312195635|ref|YP_004015696.1| glycine cleavage system T protein [Frankia sp. EuI1c] gi|311226971|gb|ADP79826.1| glycine cleavage system T protein [Frankia sp. EuI1c] Length = 393 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A F+ A +T D+ + A+ + G ++ + +D Sbjct: 82 SHLGKARVAGPGAAAFVNATLTNDLGRIRPGQAQYTLCCDESGGVVDDLIAYLYGDDDVF 141 Query: 67 LEIDRSKRDSLIDKL 81 L + S ++ +L Sbjct: 142 LVPNASNTAEVVRRL 156 >gi|71083953|ref|YP_266673.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] gi|71063066|gb|AAZ22069.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1062] Length = 452 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 93/322 (28%), Gaps = 67/322 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 I+V G A F +IT D + AR + G +L ++ +I +D F Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRISKDEFWFSLSD 161 Query: 67 ----------------------LE-IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103 ++ + L+ + V ++ P G+ + Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVCPVQIQGPKSKALMKDLIGDQVDLDNMPFYGLAEA 221 Query: 104 --WNQEHTFSNSSF---------IDERFSIADVLLHRTWGHNEKIASD-IKTYHELRINH 151 ++ S S F + E AD + + +K + I H RI Sbjct: 222 KVGGRDCVISQSGFSGEAGYEIYLREATKYADDMWNAVLAAGKKHSLMVIAPAHHRRIQA 281 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKRPMI 206 GI+ D P + +S K Y+G+ + ++ ++P Sbjct: 282 GILSWGQDMDHQH-NPFQCNLGYQVSLSGKGEWNKKTDYVGKAALEKMGADLKAGQKPYK 340 Query: 207 ITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIARIDKVD 248 + L G PI + +G + A+ D Sbjct: 341 LQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKGQNIAMGYVPFDGTL 399 Query: 249 HAIKKGMALTVHGVRVKASFPH 270 +A G G + K P Sbjct: 400 NA--NGFPKGKVGTKYKVHLPA 419 >gi|126737939|ref|ZP_01753669.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] gi|126721332|gb|EBA18036.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] Length = 819 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 98/325 (30%), Gaps = 74/325 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V GK A FLQ T ++ + + +L +G I +++ +++F++ Sbjct: 493 LMVEGKDAESFLQRACTNNMA-MANGRVVYTLMLNERGGIESDVTVARHGDESFMVMSSI 551 Query: 72 SKRDSLIDKLL-------FYKLR----------------SNVIIEIQPINGVVLSWN--- 105 S L +LR +++ + I+ ++ Sbjct: 552 SHTRRDYLHLRDLIQLGEDLRLRDATSAYGVLGIMGPKSRDLLQRVSGIDASNAAFPFNS 611 Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147 Q ++ +R S + + + + + + L Sbjct: 612 LQHFHIGHAPVFAQRLSYSGEMGWEIFITPDFAEHVFELLMQAGAQDGLCLIGGEALNAL 671 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQH--RNIIRKR 203 R+ G V + + PH M+ + C +E+ + R + R K Sbjct: 672 RLEKGFVHWGHEMAYTEA-PHQLGMEFV--------CKTKKEIPFIGRDAYLARRAENKG 722 Query: 204 PMI----ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI--DKVDHAI 251 P + + + L P+L D G + + L + ++ + + Sbjct: 723 PFLCSIKLQDPEPLLHHNEPVLRDGKIAGYVTAGAWGQSLGSAVGLCLLQLPQGQTEKDR 782 Query: 252 KKGMALTV----HGVRVKASFPHWY 272 A TV + S +Y Sbjct: 783 VAKGAFTVLVEGKSIPADVSLAPFY 807 >gi|254166816|ref|ZP_04873670.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] gi|289596146|ref|YP_003482842.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] gi|197624426|gb|EDY36987.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] gi|289533933|gb|ADD08280.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] Length = 371 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A FL I+ D + A +A + +G ++ +++K+ ED ++ Sbjct: 49 SHMGDIIVEGPDATEFLSFILPTDFSKVKVWKATYTAFINHKGILIDDTIVTKLAEDRYL 108 Query: 67 LEIDRSKRDSLIDKL 81 L + + D + + L Sbjct: 109 LVPNAATSDLIYNWL 123 >gi|254168905|ref|ZP_04875745.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] gi|197622169|gb|EDY34744.1| glycine cleavage system T protein [Aciduliprofundum boonei T469] Length = 371 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A FL I+ D + A +A + +G ++ +++K+ ED ++ Sbjct: 49 SHMGDIIVEGPDATEFLSFILPTDFSKVKVWKATYTAFINHKGILIDDTIVTKLAEDRYL 108 Query: 67 LEIDRSKRDSLIDKL 81 L + + D + + L Sbjct: 109 LVPNAATSDLIYNWL 123 >gi|146103747|ref|XP_001469635.1| aminomethyltransferase, mitochondrial precursor [Leishmania infantum] gi|134074005|emb|CAM72745.1| putative glycine synthase [Leishmania infantum JPCM5] Length = 377 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G F++ + D+ + + QG I +++++ D Sbjct: 55 SHMGQYEVRGADREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTRMA-DHLF 113 Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFID---- 117 L ++ ++ + + LR +++ P++ +++ + S F+D Sbjct: 114 LVLNAGCKEKDVAHMER-VLREGAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPD 172 Query: 118 -------ERFSIADVLLHRT-------------------------WGHNEKIASDIKTYH 145 +R SI + + T + + Sbjct: 173 MGFMQCRQRVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMSRKAEMIGLGARD 232 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQ---HRNI 199 LR+ G+ + I P A + IS + G +IG E + + + Sbjct: 233 SLRLEAGLNLYGHELT-EDINPVAARF--MWAISKRRMAEGGFIGYEPIKYFRDNASKGA 289 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 + + + + T + + I +G + L AI +D+ + Sbjct: 290 VPRLRVGLVSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKV 349 Query: 256 ALTVHGVRVKASF 268 L V G RV A Sbjct: 350 DLVVRGRRVAAEV 362 >gi|307309553|ref|ZP_07589208.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti BL225C] gi|307320385|ref|ZP_07599802.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti AK83] gi|306893951|gb|EFN24720.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti AK83] gi|306900013|gb|EFN30634.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium meliloti BL225C] Length = 377 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 73/313 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 + + G AI L I T D+ + + + +L +G ++ + ++++L Sbjct: 59 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYACMLNDRGHFTDDCIVYRTGPNSWMLVHGS 118 Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103 D L +D L Y + I + Sbjct: 119 GSGYEEIVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146 + + T + + R + + + I Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMIWDRIVAEGKEMGIIPCCFSVLDM 229 Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ + + P D P + +D +S K + G E +R++ R Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGR 286 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253 + M+I G + + ++G + + K+++AIAR+D VD A++ Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVYAEGKKVGVITCPSYSTLTKRSMAIARLD-VDKAVQ- 343 Query: 254 GMALTVHGVRVKA 266 G L VHG + A Sbjct: 344 GAKLEVHGKNLNA 356 >gi|300995663|ref|ZP_07181191.1| glycine cleavage system T protein [Escherichia coli MS 200-1] gi|110344645|gb|ABG70882.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Escherichia coli 536] gi|115514259|gb|ABJ02334.1| putative aminomethyltransferase of glycine cleavage system [Escherichia coli APEC O1] gi|300304771|gb|EFJ59291.1| glycine cleavage system T protein [Escherichia coli MS 200-1] gi|315289432|gb|EFU48827.1| glycine cleavage system T protein [Escherichia coli MS 110-3] gi|324005557|gb|EGB74776.1| glycine cleavage system T protein [Escherichia coli MS 57-2] gi|324011745|gb|EGB80964.1| glycine cleavage system T protein [Escherichia coli MS 60-1] Length = 387 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 132 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182 >gi|259909566|ref|YP_002649922.1| glycine cleavage system aminomethyltransferase T [Erwinia pyrifoliae Ep1/96] gi|224965188|emb|CAX56720.1| Aminomethyltransferase (Glycine cleavage system T protein) [Erwinia pyrifoliae Ep1/96] gi|283479644|emb|CAY75560.1| aminomethyltransferase [Erwinia pyrifoliae DSM 12163] Length = 365 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+L ++ ++ I ED F Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTRPGKALYTAMLNASAGVIDDLIVYFISEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + V + E ++ + + + F D + Sbjct: 110 RLVVNSATREKDLAWVAEHAAVYGVELTERDDLSLIAVQGPNAQCKAQRVFDDAQRDAVS 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + L + + + LR+ Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNEQAAELWQQLLAAGVQPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201 G+ + T+ P A M G + +IG+E++ + + R Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRQFIGREMLELQRAKGTERLVGLIMTE 288 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261 K + + +L I G+ +G +A+AR+ + + + Sbjct: 289 KGVLRNELPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGDQAVVQIRNRA 346 Query: 262 VRVKASFP 269 + V + P Sbjct: 347 MPVTVTKP 354 >gi|333000555|gb|EGK20133.1| glycine cleavage system T protein [Shigella flexneri K-272] gi|333015236|gb|EGK34578.1| glycine cleavage system T protein [Shigella flexneri K-227] Length = 347 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 97/313 (30%), Gaps = 58/313 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + + I ++ ++ + + F D + + Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQLQAVE 152 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 153 GMKPFFGVQVGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRL 212 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQ-----------H 196 G+ + TI P A M T +IG+E V R Sbjct: 213 EAGMNLYGQEM-DETISPLAANMGWTIAWEPTDRDFIGREALEVQREHGTEKLVGLVMTE 271 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + ++R + TD I+T TLG ++A+AR+ + + Sbjct: 272 KGVLRNEL-PVRFTDAQGNQHEGIITSGTFSPTLG-----YSIALARVPEGIGETAI-VQ 324 Query: 257 LTVHGVRVKASFP 269 + + VK + P Sbjct: 325 IRNREMPVKVTKP 337 >gi|326776463|ref|ZP_08235728.1| glycine cleavage system T protein [Streptomyces cf. griseus XylebKG-1] gi|326656796|gb|EGE41642.1| glycine cleavage system T protein [Streptomyces cf. griseus XylebKG-1] Length = 371 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 96/295 (32%), Gaps = 54/295 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E Sbjct: 52 LSHMGEITVTGPEAAAFLSYALVGN-IATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93 +++ + ++D L Y L + + + Sbjct: 111 YMVVANAGNAQIVLDALTERVSGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170 Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143 + + ++ F+ + L + I + Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWRALTEAGAPHGLIPCGLSC 230 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199 LR+ G+ + + + P DA + + + K G ++G+ ++ R Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTAAAERAETAP 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250 RK +I +P +G ++ IG + + +A+A +D A Sbjct: 288 PRKLVGLIAEGRRVPRAGFAVVAGGKVIGEVTSGAPSPTLGRPIAMAYVDAAFAA 342 >gi|218883610|ref|YP_002427992.1| glycine cleavage system aminomethyltransferase T [Desulfurococcus kamchatkensis 1221n] gi|218765226|gb|ACL10625.1| glycine cleavage system aminomethyltransferase T [Desulfurococcus kamchatkensis 1221n] Length = 369 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 106/313 (33%), Gaps = 51/313 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIEEDTF 65 S+ I + G +PF Q I T D+ G + L ++ ++ K+ ++ + Sbjct: 49 SHMGRILLKGSDVLPFAQYIYTKDISKTKEHFMSGPMLALNQWARVKDDEMMYKVSDEEW 108 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------------------NGVVLSWNQ- 106 +L + R+S+++ K +EI + + W Sbjct: 109 LLVTNALARESMLNYFEKVKSEKGFRVEIADLTFNYSMIALQGPRAAEVMESLGAKWAGD 168 Query: 107 ---------EHTFSNSSFIDERFSIADVLLHRTWGHNEKI-------------ASDIKTY 144 E +F+ R WG + ++ + + Sbjct: 169 LKVLEFRMNEEIHGVKTFLVSRSGWTGEDGFEIWGEHGEMRKLVDLLVSKGVKLAGLIAR 228 Query: 145 HELRINHGIVDPNTDFLPSTI-FPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LRI G V ++ + FP + L I+ K ++G+E + + + Sbjct: 229 DTLRIEMGFVLGGHEYGEDPVKFPCALSLRYGLGAITWEKRGFVGEEALRACRREGVRWI 288 Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGM 255 R + G + P + + +DD+ +G + V + +A+A +D + + Sbjct: 289 RVGLKLGKEAGRLFPRQDAGVYSDDVWVGWVTSGTYSPVLNRGIAMAYVDARYAVFGEEL 348 Query: 256 ALTVHGVRVKASF 268 A+ + G R A Sbjct: 349 AVDIRGKRYPAKI 361 >gi|84517358|ref|ZP_01004712.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis SKA53] gi|84508838|gb|EAQ05301.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis SKA53] Length = 1002 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 93/308 (30%), Gaps = 61/308 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + L R + + G ++ +++++ EDT++ Sbjct: 677 VKGPDAGKFLDMLYTNMMSNLGVGKCRYGLMCSENGFLIDDGVVARMSEDTWLCHTTTGG 736 Query: 74 RDSLIDKL-----------LFYKL--------------RSNVIIEI---QPINGVVLSWN 105 D + + Y ++ ++++ ++ + Sbjct: 737 ADRIHAWMEDWLQCEWWDWKVYVANVTEQWAQVAVVGPKAKLLLDKLGGTDLSALPFMQW 796 Query: 106 QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-------KTYHELR 148 Q R S + L W ++ + H +R Sbjct: 797 QAGQIGGFDARVFRISFSGELSYEIAVPAGQGRAFWDALVDAGAEFGIMPYGTEALHIMR 856 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII- 207 G + + T+ P D + +S K Y+G+ +R N R R + + Sbjct: 857 AEKGFIMIGDE-TDGTVIPQDLNLHW--ALSKKKDDYLGKRAHARSFMDNPDRWRLVGLE 913 Query: 208 TGTDDLPPSGSPILTDDIEI-------GTLGVVVG----KKALAIARIDKVDHAIKKGMA 256 T + P G+ + D G + + +A+ + + + + + Sbjct: 914 TLDGSVLPDGAYAIADGSNANGQRNTQGRVTSTYHSPTLGRGIAMGLVHRGPDRMGEVIT 973 Query: 257 L-TVHGVR 263 TV + Sbjct: 974 FNTVDDAK 981 >gi|326568098|gb|EGE18182.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis BC7] Length = 366 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110 >gi|326566021|gb|EGE16181.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis 12P80B1] Length = 365 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110 >gi|301027380|ref|ZP_07190720.1| glycine cleavage system T protein [Escherichia coli MS 69-1] gi|300395080|gb|EFJ78618.1| glycine cleavage system T protein [Escherichia coli MS 69-1] Length = 387 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 132 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182 >gi|254462773|ref|ZP_05076189.1| glycine cleavage T protein [Rhodobacterales bacterium HTCC2083] gi|206679362|gb|EDZ43849.1| glycine cleavage T protein [Rhodobacteraceae bacterium HTCC2083] Length = 392 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 70/294 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G +A F Q + D+ + + I+ G IL ++ ++ E+ F + + D Sbjct: 79 VEITGPNAAKFTQMLTCRDLSKMAVGQCKYILIINADGGILNDPILLRLAENHFWISLAD 138 Query: 71 RSKRDSLIDKLLFYKLRSN---------VIIEI----------------------QPING 99 L + V I I Sbjct: 139 SDIL-----------LWAKGVAINSGLDVTISEPDVSPLQLQGPKSGEILKALFGDDIMD 187 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------T 143 + W +E I R + L + + + + T Sbjct: 188 LRYYWLREVELKGIPLIVSRTGWSSELGYEIYLRDGSKGDLLWETIMAAGLEFGLKPGHT 247 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 RI G++ + D ST P + D L + + +IG+ + RI+ + RK+ Sbjct: 248 SSIRRIEGGMLSYHADADMST-NPFELGFDRLVNLDMEAD-FIGKAALQRIKDEGLSRKQ 305 Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248 +I L + I D IG + + ALA+ ++ + Sbjct: 306 IGLIIDGAPLTCPNTTFWEINLDGTPIGKVTSAIYSPRLEQNIALAMVSVEHAN 359 >gi|110806807|ref|YP_690327.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri 5 str. 8401] gi|123342543|sp|Q0T0Z3|GCST_SHIF8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|110616355|gb|ABF05022.1| aminomethyltransferase [Shigella flexneri 5 str. 8401] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|311898459|dbj|BAJ30867.1| putative aminomethyltransferase [Kitasatospora setae KM-6054] Length = 372 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 96/310 (30%), Gaps = 58/310 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A L A++ + L AR + I G IL ++ + ED Sbjct: 50 LSHMGEITVSGPQAGELLDHALV-GFISALGVLRARYTMICREDGGILDDLIVYRTAEDE 108 Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +++ + S ++D L V+ + + ++ E + D Sbjct: 109 YLVVANASNAQVVLDALTERAAGFDAVVRDDRDAYALLAVQGPEANGILAKLTDADLPGL 168 Query: 124 -------------DVLLHRTWGHNE-------KIASDIKTY------------------- 144 +V L RT E A + Sbjct: 169 KYYALLPATVAGREVWLARTGYTGEDGFEVFCAPADAAHLWTALTEAGTAEGLVPCGLSC 228 Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199 LR+ G+ + + P DA + + + K G ++G++ + + Sbjct: 229 RDTLRLEAGMPLYGHELSTE-LTPFDAGLGRV--VRFDKTTNDGAFVGRKALEEAAAQAE 285 Query: 200 IR--KRPMIITGTDDLPPSG--SPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI 251 + ++ + + P + + + IG + L AIA +D Sbjct: 286 LNPPRKLVGLVSEGKRVPRAEYAVVDAEGAAIGRITSGSPSPTLGKPIAIAYLDAAHAEP 345 Query: 252 KKGMALTVHG 261 +A+ V G Sbjct: 346 GSTVAVDVRG 355 >gi|209884574|ref|YP_002288431.1| glycine cleavage system T protein [Oligotropha carboxidovorans OM5] gi|209872770|gb|ACI92566.1| glycine cleavage system T protein [Oligotropha carboxidovorans OM5] Length = 382 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 79/260 (30%), Gaps = 42/260 (16%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L+ ++ D+L + R + G IL +++ D L ++ + +D+ Sbjct: 74 EDAAAALERLVPQDILGIAPGRQRYALFTNEDGGILDDLMVANFG-DALFLVVNAACKDA 132 Query: 77 LIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ER------- 119 L + L +I +Q V + + T S F+D R Sbjct: 133 DEAHLRAHLSSTCEIVPLTDRALIALQGPKAVAVLEKLDPTISAMRFMDSGPRTLLGIPC 192 Query: 120 ------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 + A+ L+ + + LR+ G+ D Sbjct: 193 FVSRSGYTGEDGFEISVPAADAERLVTTLLADPAVLPIGLGARDSLRLEAGLCLYGHDID 252 Query: 162 PSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 T P + ++ + K G + G + + R R+R + Sbjct: 253 T-TTTPIEGALEWAIQKARRKGGAREGGFPGADTILRQLAEGAPRRRVGLKAEGRAPVRE 311 Query: 217 GSPILTDDIEIGTLGVVVGK 236 +P+ D LG V Sbjct: 312 DAPLFADASSTNRLGRVTSG 331 >gi|34541215|ref|NP_905694.1| glycine cleavage system aminomethyltransferase T [Porphyromonas gingivalis W83] gi|188994414|ref|YP_001928666.1| glycine cleavage system aminomethyltransferase T [Porphyromonas gingivalis ATCC 33277] gi|59797832|sp|Q7MUG4|GCST_PORGI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238691465|sp|B2RI74|GCST_PORG3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|34397531|gb|AAQ66593.1| glycine cleavage system T protein [Porphyromonas gingivalis W83] gi|188594094|dbj|BAG33069.1| aminomethyltransferase [Porphyromonas gingivalis ATCC 33277] Length = 362 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 86/306 (28%), Gaps = 51/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V G +A+ FLQ + + D L + G I+ FL+ + EE+ +++ + + Sbjct: 56 VKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAAN 115 Query: 73 ---------------------------------KRDSLIDKLLFYKLRS------NVIIE 93 K ++ +L L V Sbjct: 116 IAKDWAWCRQQNTMGAILENASDNIAQLAVQGPKATEVMQRLTDIDLNEITYYTFKV-GS 174 Query: 94 IQPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151 V++S + +++ G E I + + LR+ Sbjct: 175 FAGCPDVIISATGYTGAGGFELYFYPQYAQKIWDALFEAGKPEGIKPAGLGARDTLRLEM 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D T P +A + + + K ++++ + + RK Sbjct: 235 GFCLYGNDIC-DTTSPIEAGLGWITKFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDK 293 Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P I + IG + + + + G+ + ++ Sbjct: 294 GIPRQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKA 353 Query: 265 KASFPH 270 + P Sbjct: 354 EIVKPP 359 >gi|226887919|pdb|3GSI|A Chain A, Crystal Structure Of D552a Dimethylglycine Oxidase Mutant Of Arthrobacter Globiformis In Complex With Tetrahydrofolate Length = 827 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 53/278 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ LQ + TAD+ + +L G + ++++ EDTF L + Sbjct: 508 LEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSAITVARLSEDTFQLGANG 566 Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100 + + ++ + ++R S V + +G+ Sbjct: 567 NIDTAYFERAARHQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGL 626 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 + R S L + + IA+ Sbjct: 627 KYFRAKNVVIGGIPVTAMRLSYVGELGWELYTSADNGQRLWDALWQAGQPFGVIAAGRAA 686 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202 + LR+ G TD P +A + + + K +IG+ + R + + R Sbjct: 687 FSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKESFIGKGALEGRTEEASARRL 743 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 R + I + P+ + +G + +A Sbjct: 744 RCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVA 781 >gi|194431642|ref|ZP_03063933.1| glycine cleavage system T protein [Shigella dysenteriae 1012] gi|194419998|gb|EDX36076.1| glycine cleavage system T protein [Shigella dysenteriae 1012] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|262340965|ref|YP_003283820.1| glycine cleavage system aminomethyltransferase T [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272302|gb|ACY40210.1| glycine cleavage system aminomethyltransferase T [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 367 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 56/287 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK ++ +Q + T D+ + A+ + + G I+ ++ KI E + Sbjct: 54 SHMGKFILSGKDSMNLIQYLTTNDLSKIKIGQAQYNCFINEHGGIIDDLVVYKITEKKLL 113 Query: 67 LEIDRSKRDSLIDKLLFYKL---RSNVII------------------------------- 92 L ++ + + + + S++ + Sbjct: 114 LIVNAANIEKNKKWINHHIKKNAFSDIELIDFSSEYSLLAIQGPFSLFYIQKLTNIPLQK 173 Query: 93 ---------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 E I V++S A+ + ++ + I I + Sbjct: 174 IPFYHFEIGEFAEIQKVLISCTGYTGSKGVEIYIPN-EYAEKIWNKILEIKKIIPCGIAS 232 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 + LR+ G D P +A + + K ++ +E++ + +++ +K Sbjct: 233 RNSLRLEMGYRLWGKDLC-EKTTPIEAGLSWI--TKFEKK-FLAKEILQKQKNKGEYKKF 288 Query: 204 P-MIITGTDDLPPSG-SPILTDDIEIGTLGVVV------GKKALAIA 242 +I +P G S I D+ IG + L Sbjct: 289 ISFVIEEKGKIPRDGYSLIDKDNNIIGNVTSGTFSPILKKGIGLGYL 335 >gi|331674389|ref|ZP_08375149.1| glycine cleavage system T protein [Escherichia coli TA280] gi|331068483|gb|EGI39878.1| glycine cleavage system T protein [Escherichia coli TA280] Length = 405 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 91 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 150 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 151 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 200 >gi|258653766|ref|YP_003202922.1| glycine cleavage T protein (aminomethyl transferase) [Nakamurella multipartita DSM 44233] gi|258556991|gb|ACV79933.1| glycine cleavage T protein (aminomethyl transferase) [Nakamurella multipartita DSM 44233] Length = 767 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 101/327 (30%), Gaps = 69/327 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +L R + P G ++ + ++ +D F+ Sbjct: 430 STLGKIDVQGPDAGWFLDMLYTNLMSSLKVGFIRYGVMCGPDGMVIDDGTVIRVAQDRFL 489 Query: 67 LEIDRSKRDSLIDKLL--------FYKLRS------NVIIEIQPI--NGVVLSWNQEHTF 110 + ++D + K+ + V I + V+ + + Sbjct: 490 VTTTTGNAAKILDWMQEWLQTEWPQRKVTATSVTEHWVTIPLVGPRSRDVLAAVTTDLDV 549 Query: 111 SNSSF-----IDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146 SN +F D + A V + R E + ++ + Sbjct: 550 SNDAFGFMTWRDTSIAGAPVRVCRISFSGELAYEVNVRAWEGLEVWQALIAAGEPFGITP 609 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G + T+ P D M +S K ++G+ +R +++ Sbjct: 610 YGTETMHVLRAEKGFPIIGQE-TDGTVTPQDLGMSW--AVSKKKVDFLGKRSFARPENQR 666 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDI----------EIGTLGVVVGKK------ALA 240 RK+ + I D + P GS I+ +G + + ALA Sbjct: 667 ADRKQLIGILPDDPTIVLPEGSQIVETATLTVPVTTPVPMLGHVTSSYHSEALGRGFALA 726 Query: 241 IARIDKVDHAIKKGMALTVHGVRVKAS 267 + R + + V + Sbjct: 727 MIRAGRDRIGQHLHAYAGADLIPVTVT 753 >gi|241956604|ref|XP_002421022.1| aminomethyltransferase, mitochondrial precursor, putative; glycine decarboxylase complex subunit, putative [Candida dubliniensis CD36] gi|223644365|emb|CAX41178.1| aminomethyltransferase, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 394 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK A LQ I D+ LP + S +L G ++ +I+K E+ + + + Sbjct: 73 INGKDAQKLLQKITPIDLNKLPVNTSSLSVLLNNNGGVIDDCIITKHGEEDYYMVTNAGC 132 Query: 74 RDSLIDKLL 82 RD I + Sbjct: 133 RDKDIKFIK 141 >gi|331648651|ref|ZP_08349739.1| glycine cleavage system T protein [Escherichia coli M605] gi|331042398|gb|EGI14540.1| glycine cleavage system T protein [Escherichia coli M605] Length = 405 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 91 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 150 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 151 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 200 >gi|307305580|ref|ZP_07585327.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C] gi|307317521|ref|ZP_07596960.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83] gi|306896679|gb|EFN27426.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83] gi|306902283|gb|EFN32879.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C] Length = 815 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 90/317 (28%), Gaps = 57/317 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++ G+ A +L +IT V + +G+IL + IEED F Sbjct: 496 LPGFSRFRLKGEGAREWLSGLITGRVPK--PGRIGLAYFADDKGRILTEMSVMAIEEDFF 553 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------------NGVVL 102 L + + + L ++ ++ + + + Sbjct: 554 FLITAATAQWHDFEWLRKHR-PADAAFTLDDVTVKFACQILTGPKSRAILAEVSDADLAK 612 Query: 103 SWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143 W T + R S A L E A+ ++ Sbjct: 613 GWLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKVEDTAAVFDAVWDAGQKHGLKPFGMEA 672 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G D ++ + K + G+ + R + + + ++ Sbjct: 673 LDSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWAKPDFKGKAALEREKQQGVTKRF 729 Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256 + + D P S + + +G AL + R D + + Sbjct: 730 VTLTVEAGDCDAPYMSTLWSGGEVVGETTSGNWGYRTGKSIALGMLRADLAVPGQEVEVE 789 Query: 257 LTVHGVR--VKASFPHW 271 + + V+ P W Sbjct: 790 IFGDRFKAIVQPDQPLW 806 >gi|288871243|ref|ZP_06116917.2| glycine cleavage system T protein [Clostridium hathewayi DSM 13479] gi|288864203|gb|EFC96501.1| glycine cleavage system T protein [Clostridium hathewayi DSM 13479] Length = 218 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 37/80 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I G+ A+ L ++T D + AR S + +G ++ ++ KI ++ + Sbjct: 68 SHMGEILCEGEGALDNLNHLLTNDFTGMSDGQARYSPMCNEEGGVVDDLIVYKIRDNHYF 127 Query: 67 LEIDRSKRDSLIDKLLFYKL 86 + ++ + +D + + L Sbjct: 128 IVVNAANKDKDFAWMTAHSL 147 >gi|229576679|ref|YP_861538.2| glycine cleavage system aminomethyltransferase T [Gramella forsetii KT0803] Length = 360 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 46/268 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G++A+ +Q I + D L A+ S + +G I+ +I +I+ + ++ Sbjct: 49 SHMGEFLISGENALKLIQKISSNDASKLVDGKAQYSCMPNHEGGIVDDLIIYRIDAEKYL 108 Query: 67 LEIDRSKRDS----LIDKLLFYK-LRS-----------------------NVIIEI---- 94 L ++ S + + +R +V +E Sbjct: 109 LVVNASNIEKDWNWIAQHNTMDATVRDMSDEMSLLAIQGPKAAEAMQSITDVDLENMKFY 168 Query: 95 -------QPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + V++S F +E + + + Sbjct: 169 TFQVDKFADVEKVIISATGYTGSGGFEIYFRNEDAAQVWNAVMEAGKEYGIKPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + +K +I E + + RK Sbjct: 229 TLRLEMGYSLYGNDI-NDTTSPIEAGLGWI--TKFSKD-FINSEELKAQKENGPERKLVA 284 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGV 232 +P G I+ + +IG + Sbjct: 285 FEMDERGIPRQGYDIVDENGKKIGEVTS 312 >gi|117578002|emb|CAL66471.1| aminomethyltransferase (glycine cleavage system T protein) [Gramella forsetii KT0803] Length = 373 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 46/268 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G++A+ +Q I + D L A+ S + +G I+ +I +I+ + ++ Sbjct: 62 SHMGEFLISGENALKLIQKISSNDASKLVDGKAQYSCMPNHEGGIVDDLIIYRIDAEKYL 121 Query: 67 LEIDRSKRDS----LIDKLLFYK-LRS-----------------------NVIIEI---- 94 L ++ S + + +R +V +E Sbjct: 122 LVVNASNIEKDWNWIAQHNTMDATVRDMSDEMSLLAIQGPKAAEAMQSITDVDLENMKFY 181 Query: 95 -------QPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + V++S F +E + + + Sbjct: 182 TFQVDKFADVEKVIISATGYTGSGGFEIYFRNEDAAQVWNAVMEAGKEYGIKPIGLAARD 241 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + +K +I E + + RK Sbjct: 242 TLRLEMGYSLYGNDI-NDTTSPIEAGLGWI--TKFSKD-FINSEELKAQKENGPERKLVA 297 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGV 232 +P G I+ + +IG + Sbjct: 298 FEMDERGIPRQGYDIVDENGKKIGEVTS 325 >gi|72162750|ref|YP_290407.1| glycine cleavage system aminomethyltransferase T [Thermobifida fusca YX] gi|71916482|gb|AAZ56384.1| aminomethyltransferase [Thermobifida fusca YX] Length = 372 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 94/285 (32%), Gaps = 60/285 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 LS+ I+V G A L ++ L AR + I+T QG +L ++ ++ Sbjct: 56 LSHMGEIRVHGPQAADCLDYALVGQLST----LAVGRARYTMIVTEQGGVLDDLIVYRLA 111 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWN------------- 105 +D +++ + + ++ L R+ I + + +L+ Sbjct: 112 DDDYLVVANAANTGTVAAALTE---RAAGFTATITDETADYALLALQGPQSAAILGPLTD 168 Query: 106 -----------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------- 144 Q T + ++ + R + A + Sbjct: 169 VDLSALRPYAAQHGTVAGTAVLLSRTGYTGEDGFEIYLRPGTAAPALWDTLVEAGQPHGL 228 Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQ 195 LR+ G+ + + + P+DA + + + L K G ++G+ ++ Sbjct: 229 LPAGLAARDTLRLEAGMPLYGNELT-AELTPYDAGLGRV--VKLDKPGDFVGRAALAARA 285 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + ++ +P G P+L D + +GT+ L Sbjct: 286 SSGPTQVLVGLVGRGRRVPRKGYPVLRDGVPVGTVTSGAPSPTLG 330 >gi|296775686|gb|ADH42963.1| glycine cleavage system T protein (aminomethyltransferase) [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 455 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 83/279 (29%), Gaps = 61/279 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A F +IT D + R + +G +L ++ ++ +D F + Sbjct: 110 IRVKGPDAEKFTDYVITRDATKISTMRGRYVILCNYKGGVLNDPVLMRVADDEFWFSLSD 169 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118 S + + K R NV I+ V + + N D+ Sbjct: 170 SDIGIYLQGVNADK-RFNVEIDEIDSCPVQIQGPKSKALMNDLIGDQVDLDNMPFYGLAE 228 Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150 + + + + N + A D+ H RI Sbjct: 229 AKVGGRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 288 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGIS----LTKGC-YIGQEVVSRIQHRNIIRKRPM 205 GI+ D P + +S K YIG+E + +++ + ++P Sbjct: 289 AGILSWGQDMDHQN-NPFQCNLGYQVSLSGKGEWNKQSDYIGKEALEKMKEQLKNGEKPY 347 Query: 206 IITGTDDLPPSGSPILT------------DDIEIGTLGV 232 + L G+P+ +G + Sbjct: 348 KLQLVG-LELGGNPVEDYANDFWLISNDKGGKPVGFITS 385 >gi|315614938|gb|EFU95576.1| glycine cleavage system T protein [Escherichia coli 3431] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|330916154|ref|XP_003297312.1| hypothetical protein PTT_07671 [Pyrenophora teres f. teres 0-1] gi|311330080|gb|EFQ94589.1| hypothetical protein PTT_07671 [Pyrenophora teres f. teres 0-1] Length = 850 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 59/274 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A+ LQ + T+DV + ++ G +L +S++E+D F ++ + Sbjct: 515 EVAGPGAVHLLQRLTTSDVSK-QPGSITHTLLVNTHGGVLSDLFVSRLEQDVF--QVGAN 571 Query: 73 KRDSLIDKLLFYKLRSNV---------IIEIQPINGVVLSWNQEH--------------- 108 L L R V + +I + W Sbjct: 572 TATDLA-YLAREA-RRQVNHTPGEWAQVRDITGSTCCLGLWGPRARDVIQMVSSDDFSNK 629 Query: 109 -----------------TFSNSSFIDE---RFSIADVLLHRTWG-------HNEKIASDI 141 T SF+ E R W + +A+ Sbjct: 630 GLPYMGVKKTSIAGVPVTMFRKSFVGEYGWEIQTTPEYGQRLWDTLWQSGKPHGLVAAGR 689 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 ++ LRI GI +D P +A + + K +IG+ + + + R Sbjct: 690 AAFNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFIGKAALESLSKKAAPR 747 Query: 202 K-RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 + R + + + P+ D G + Sbjct: 748 RLRCLTVDDGRSMVMGKEPVFVDGQRAGYVTSAA 781 >gi|184200245|ref|YP_001854452.1| aminomethyltransferase [Kocuria rhizophila DC2201] gi|183580475|dbj|BAG28946.1| aminomethyltransferase [Kocuria rhizophila DC2201] Length = 381 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 113/328 (34%), Gaps = 70/328 (21%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A FL A++ + + A+ S I+ G++L + ++ E+ Sbjct: 50 LSHMGEVEVTGPQAGAFLDHALVGV-LSGIGVGRAKYSVIVDEAGRVLDDLITYRLGEER 108 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS--NSSFIDE- 118 +++ + +D++++ L R+ +V ++ + +++ ++ +D Sbjct: 109 YLVVPNAGNQDTVVEALQ---QRAEAFDVTVQDRGPETSLIAVQGPRALEVLRATGLDPA 165 Query: 119 --------------RFSIADVLLHRTWGHNE-------KIASDIKTYHE----------- 146 R DVL RT E A ++ Sbjct: 166 EEVAGLKYYACAVARCGGVDVLAARTGYTGEDGFELYCANADAETLWNALLATAEELGTE 225 Query: 147 --------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 LR+ G+ + I P +A + L ++L K G V Sbjct: 226 DAPVQPAGLAARDSLRLEAGMPLYGHELSTE-ITPVEAGLGKLVEVALRKKDESGTRTVG 284 Query: 193 R----IQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK------KALAI 241 R+ + + + G P +G +L+ + IG + + A+A+ Sbjct: 285 HDALAAMLRSTPERTLIGLEGLGRKPIRAGYTVLSGERTIGEVTSGLPSPTLGKPVAMAL 344 Query: 242 ARIDKVDHAIKKGMALT-VHGVRVKASF 268 D +D +++ G V+ + Sbjct: 345 VATDALDEIAAGTVSVQDARGRGVEVAR 372 >gi|24114158|ref|NP_708668.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri 2a str. 301] gi|30064216|ref|NP_838387.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri 2a str. 2457T] gi|59797859|sp|Q83JU1|GCST_SHIFL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|24053299|gb|AAN44375.1| aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system [Shigella flexneri 2a str. 301] gi|30042473|gb|AAP18197.1| aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system [Shigella flexneri 2a str. 2457T] gi|281602238|gb|ADA75222.1| Aminomethyltransferase [Shigella flexneri 2002017] gi|313647945|gb|EFS12391.1| glycine cleavage system T protein [Shigella flexneri 2a str. 2457T] gi|332765836|gb|EGJ96049.1| glycine cleavage system T protein [Shigella flexneri 2930-71] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|15803440|ref|NP_289473.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 EDL933] gi|15833030|ref|NP_311803.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. Sakai] gi|168747616|ref|ZP_02772638.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4113] gi|168753843|ref|ZP_02778850.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4401] gi|168760033|ref|ZP_02785040.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4501] gi|168766898|ref|ZP_02791905.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4486] gi|168775782|ref|ZP_02800789.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4196] gi|168778918|ref|ZP_02803925.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4076] gi|168785751|ref|ZP_02810758.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC869] gi|168800038|ref|ZP_02825045.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC508] gi|195936523|ref|ZP_03081905.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. EC4024] gi|208805880|ref|ZP_03248217.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4206] gi|208814507|ref|ZP_03255836.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4045] gi|208819863|ref|ZP_03260183.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4042] gi|209395867|ref|YP_002272379.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4115] gi|217327658|ref|ZP_03443741.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. TW14588] gi|254794854|ref|YP_003079691.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. TW14359] gi|261226217|ref|ZP_05940498.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli O157:H7 str. FRIK2000] gi|261256528|ref|ZP_05949061.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli O157:H7 str. FRIK966] gi|24636856|sp|Q8XD32|GCST_ECO57 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226697519|sp|B5YQ97|GCST_ECO5E RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|12517432|gb|AAG58032.1|AE005520_10 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system [Escherichia coli O157:H7 str. EDL933] gi|13363248|dbj|BAB37199.1| aminomethyltransferase [Escherichia coli O157:H7 str. Sakai] gi|187768751|gb|EDU32595.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4196] gi|188017802|gb|EDU55924.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4113] gi|189003467|gb|EDU72453.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4076] gi|189358568|gb|EDU76987.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4401] gi|189363777|gb|EDU82196.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4486] gi|189369328|gb|EDU87744.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4501] gi|189373970|gb|EDU92386.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC869] gi|189377616|gb|EDU96032.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC508] gi|208725681|gb|EDZ75282.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4206] gi|208735784|gb|EDZ84471.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4045] gi|208739986|gb|EDZ87668.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4042] gi|209157267|gb|ACI34700.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. EC4115] gi|209760480|gb|ACI78552.1| aminomethyltransferase [Escherichia coli] gi|209760482|gb|ACI78553.1| aminomethyltransferase [Escherichia coli] gi|209760486|gb|ACI78555.1| aminomethyltransferase [Escherichia coli] gi|217320025|gb|EEC28450.1| glycine cleavage system T protein [Escherichia coli O157:H7 str. TW14588] gi|254594254|gb|ACT73615.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli O157:H7 str. TW14359] gi|320189249|gb|EFW63908.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. EC1212] gi|326339011|gb|EGD62826.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. 1044] gi|326343107|gb|EGD66875.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. 1125] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|296113495|ref|YP_003627433.1| glycine cleavage system T protein [Moraxella catarrhalis RH4] gi|295921189|gb|ADG61540.1| glycine cleavage system T protein [Moraxella catarrhalis RH4] Length = 366 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110 >gi|167042027|gb|ABZ06763.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_141F21] Length = 470 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 91/323 (28%), Gaps = 69/323 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A F +IT D + R + +G +L ++ ++ +D F + Sbjct: 118 IRVKGPDAEKFTDYVITRDATKISTMRGRYVILCNYKGGVLNDPVLMRVADDEFWFSLSD 177 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118 S + + K R NV I+ V + + D+ Sbjct: 178 SDIGMYLQGVNADK-RFNVEIDEIDACPVQIQGPKAKALMQDLIGDQVDMNNIPFYGLAE 236 Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150 + + + + N + A D+ H RI Sbjct: 237 AKVGGRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 296 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGIS----LTKGC-YIGQEVVSRIQHRNIIRKRPM 205 GI+ D P + +S K Y+G++ + ++ + +P Sbjct: 297 AGILSWGQDM-DQEHNPFQCNLGYQVSLSGKGEWNKQTDYVGKDALETMKEQLKNGVKPY 355 Query: 206 IITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIARIDKV 247 + L G PI + +G + A+ + Sbjct: 356 KLQLVG-LELGGKPIEEYAPDFWLISNSSGGKPVGYITSPWHHPEKRQNIAMGYVPYE-- 412 Query: 248 DHAIKKGMALTVHGVRVKASFPH 270 + KG + G + K P Sbjct: 413 GNLNTKGFPIGNFGKKYKVHLPK 435 >gi|320640548|gb|EFX10087.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. G5101] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|293412263|ref|ZP_06654986.1| glycine cleavage system T protein [Escherichia coli B354] gi|331664478|ref|ZP_08365384.1| glycine cleavage system T protein [Escherichia coli TA143] gi|331684530|ref|ZP_08385122.1| glycine cleavage system T protein [Escherichia coli H299] gi|291469034|gb|EFF11525.1| glycine cleavage system T protein [Escherichia coli B354] gi|331058409|gb|EGI30390.1| glycine cleavage system T protein [Escherichia coli TA143] gi|331078145|gb|EGI49351.1| glycine cleavage system T protein [Escherichia coli H299] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|218691029|ref|YP_002399241.1| glycine cleavage system aminomethyltransferase T [Escherichia coli ED1a] gi|254797874|sp|B7MZ57|GCST_ECO81 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|218428593|emb|CAR09374.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli ED1a] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|82778330|ref|YP_404679.1| glycine cleavage system aminomethyltransferase T [Shigella dysenteriae Sd197] gi|309785284|ref|ZP_07679915.1| glycine cleavage system T protein [Shigella dysenteriae 1617] gi|123561624|sp|Q32BW7|GCST_SHIDS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|81242478|gb|ABB63188.1| aminomethyltransferase of glycine cleavage system [Shigella dysenteriae Sd197] gi|308926404|gb|EFP71880.1| glycine cleavage system T protein [Shigella dysenteriae 1617] Length = 364 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|332087642|gb|EGI92769.1| glycine cleavage system T protein [Shigella dysenteriae 155-74] Length = 347 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142 >gi|320195023|gb|EFW69652.1| glycine cleavage system aminomethyltransferase T [Escherichia coli WV_060327] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|323966707|gb|EGB62139.1| glycine cleavage system T protein [Escherichia coli M863] gi|327251669|gb|EGE63355.1| glycine cleavage system T protein [Escherichia coli STEC_7v] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|323960798|gb|EGB56419.1| glycine cleavage system T protein [Escherichia coli H489] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|323978802|gb|EGB73883.1| glycine cleavage system T protein [Escherichia coli TW10509] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|170766017|ref|ZP_02900828.1| glycine cleavage system T protein [Escherichia albertii TW07627] gi|170125163|gb|EDS94094.1| glycine cleavage system T protein [Escherichia albertii TW07627] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|91212283|ref|YP_542269.1| glycine cleavage system aminomethyltransferase T [Escherichia coli UTI89] gi|191173206|ref|ZP_03034737.1| glycine cleavage system T protein [Escherichia coli F11] gi|215488204|ref|YP_002330635.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O127:H6 str. E2348/69] gi|218550153|ref|YP_002383944.1| glycine cleavage system aminomethyltransferase T [Escherichia fergusonii ATCC 35469] gi|218559897|ref|YP_002392810.1| glycine cleavage system aminomethyltransferase T [Escherichia coli S88] gi|218701613|ref|YP_002409242.1| glycine cleavage system aminomethyltransferase T [Escherichia coli IAI39] gi|229560214|ref|YP_670783.2| glycine cleavage system aminomethyltransferase T [Escherichia coli 536] gi|229775962|ref|YP_854123.2| glycine cleavage system aminomethyltransferase T [Escherichia coli APEC O1] gi|237706451|ref|ZP_04536932.1| glycine cleavage system aminomethyltransferase T [Escherichia sp. 3_2_53FAA] gi|254037949|ref|ZP_04872007.1| glycine cleavage system aminomethyltransferase T [Escherichia sp. 1_1_43] gi|293416157|ref|ZP_06658797.1| glycine cleavage system T protein [Escherichia coli B185] gi|306812193|ref|ZP_07446391.1| glycine cleavage system aminomethyltransferase T [Escherichia coli NC101] gi|312964835|ref|ZP_07779075.1| glycine cleavage system T protein [Escherichia coli 2362-75] gi|331654404|ref|ZP_08355404.1| glycine cleavage system T protein [Escherichia coli M718] gi|331659034|ref|ZP_08359976.1| glycine cleavage system T protein [Escherichia coli TA206] gi|122422546|sp|Q1R7C6|GCST_ECOUT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711369|sp|B7MM91|GCST_ECO45 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711370|sp|B7NHW6|GCST_ECO7I RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711374|sp|B7LPB9|GCST_ESCF3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797872|sp|B7UHV3|GCST_ECO27 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|91073857|gb|ABE08738.1| Aminomethyltransferase [Escherichia coli UTI89] gi|190906457|gb|EDV66065.1| glycine cleavage system T protein [Escherichia coli F11] gi|215266276|emb|CAS10705.1| aminomethyltransferase,tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli O127:H6 str. E2348/69] gi|218357694|emb|CAQ90335.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia fergusonii ATCC 35469] gi|218366666|emb|CAR04420.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli S88] gi|218371599|emb|CAR19438.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli IAI39] gi|222034599|emb|CAP77341.1| Aminomethyltransferase [Escherichia coli LF82] gi|226839573|gb|EEH71594.1| glycine cleavage system aminomethyltransferase T [Escherichia sp. 1_1_43] gi|226899491|gb|EEH85750.1| glycine cleavage system aminomethyltransferase T [Escherichia sp. 3_2_53FAA] gi|281179909|dbj|BAI56239.1| aminomethyltransferase [Escherichia coli SE15] gi|291432346|gb|EFF05328.1| glycine cleavage system T protein [Escherichia coli B185] gi|294492281|gb|ADE91037.1| glycine cleavage system T protein [Escherichia coli IHE3034] gi|305854231|gb|EFM54669.1| glycine cleavage system aminomethyltransferase T [Escherichia coli NC101] gi|307625523|gb|ADN69827.1| glycine cleavage system aminomethyltransferase T [Escherichia coli UM146] gi|312290391|gb|EFR18271.1| glycine cleavage system T protein [Escherichia coli 2362-75] gi|312947437|gb|ADR28264.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O83:H1 str. NRG 857C] gi|315295693|gb|EFU55013.1| glycine cleavage system T protein [Escherichia coli MS 16-3] gi|323951657|gb|EGB47532.1| glycine cleavage system T protein [Escherichia coli H252] gi|323957375|gb|EGB53097.1| glycine cleavage system T protein [Escherichia coli H263] gi|325498466|gb|EGC96325.1| glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Escherichia fergusonii ECD227] gi|330908936|gb|EGH37450.1| aminomethyltransferase (glycine cleavage system T protein) [Escherichia coli AA86] gi|331047786|gb|EGI19863.1| glycine cleavage system T protein [Escherichia coli M718] gi|331053616|gb|EGI25645.1| glycine cleavage system T protein [Escherichia coli TA206] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|332753741|gb|EGJ84120.1| glycine cleavage system T protein [Shigella flexneri K-671] gi|332754644|gb|EGJ85010.1| glycine cleavage system T protein [Shigella flexneri 2747-71] gi|333015077|gb|EGK34420.1| glycine cleavage system T protein [Shigella flexneri K-304] Length = 347 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142 >gi|291284223|ref|YP_003501041.1| Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Escherichia coli O55:H7 str. CB9615] gi|209760478|gb|ACI78551.1| aminomethyltransferase [Escherichia coli] gi|209760484|gb|ACI78554.1| aminomethyltransferase [Escherichia coli] gi|290764096|gb|ADD58057.1| Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [Escherichia coli O55:H7 str. CB9615] gi|320645795|gb|EFX14780.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H- str. 493-89] gi|320651095|gb|EFX19535.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H- str. H 2687] gi|320656591|gb|EFX24487.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662110|gb|EFX29511.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O55:H7 str. USDA 5905] gi|320667185|gb|EFX34148.1| glycine cleavage system aminomethyltransferase T [Escherichia coli O157:H7 str. LSU-61] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|261820158|ref|YP_003258264.1| glycine cleavage system aminomethyltransferase T [Pectobacterium wasabiae WPP163] gi|261604171|gb|ACX86657.1| glycine cleavage system T protein [Pectobacterium wasabiae WPP163] Length = 371 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDDF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + V I + ++ + Sbjct: 110 RLVVNSATREKDLAWIEQHAAPFGVAINERKDLALIAVQGPQA 152 >gi|254284910|ref|ZP_04959876.1| glycine cleavage system T protein [Vibrio cholerae AM-19226] gi|150424913|gb|EDN16690.1| glycine cleavage system T protein [Vibrio cholerae AM-19226] Length = 376 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIGGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWVGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GVVTSGTAG 326 >gi|16130807|ref|NP_417381.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli str. K-12 substr. MG1655] gi|82545473|ref|YP_409420.1| glycine cleavage system aminomethyltransferase T [Shigella boydii Sb227] gi|89109684|ref|AP_003464.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli str. K-12 substr. W3110] gi|157156090|ref|YP_001464243.1| glycine cleavage system aminomethyltransferase T [Escherichia coli E24377A] gi|157162365|ref|YP_001459683.1| glycine cleavage system aminomethyltransferase T [Escherichia coli HS] gi|170018849|ref|YP_001723803.1| glycine cleavage system aminomethyltransferase T [Escherichia coli ATCC 8739] gi|191169453|ref|ZP_03031189.1| glycine cleavage system T protein [Escherichia coli B7A] gi|193063577|ref|ZP_03044666.1| glycine cleavage system T protein [Escherichia coli E22] gi|193070530|ref|ZP_03051469.1| glycine cleavage system T protein [Escherichia coli E110019] gi|194426217|ref|ZP_03058772.1| glycine cleavage system T protein [Escherichia coli B171] gi|194436710|ref|ZP_03068810.1| glycine cleavage system T protein [Escherichia coli 101-1] gi|209920359|ref|YP_002294443.1| glycine cleavage system aminomethyltransferase T [Escherichia coli SE11] gi|218555453|ref|YP_002388366.1| glycine cleavage system aminomethyltransferase T [Escherichia coli IAI1] gi|218696501|ref|YP_002404168.1| glycine cleavage system aminomethyltransferase T [Escherichia coli 55989] gi|238902030|ref|YP_002927826.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli BW2952] gi|253772254|ref|YP_003035085.1| glycine cleavage system aminomethyltransferase T [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162817|ref|YP_003045925.1| glycine cleavage system aminomethyltransferase T [Escherichia coli B str. REL606] gi|256019296|ref|ZP_05433161.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9] gi|256024584|ref|ZP_05438449.1| glycine cleavage system aminomethyltransferase T [Escherichia sp. 4_1_40B] gi|260845574|ref|YP_003223352.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O103:H2 str. 12009] gi|260857028|ref|YP_003230919.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O26:H11 str. 11368] gi|260869582|ref|YP_003235984.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O111:H- str. 11128] gi|293449228|ref|ZP_06663649.1| glycine cleavage system T protein [Escherichia coli B088] gi|300906542|ref|ZP_07124235.1| glycine cleavage system T protein [Escherichia coli MS 84-1] gi|300925112|ref|ZP_07141027.1| glycine cleavage system T protein [Escherichia coli MS 182-1] gi|300947630|ref|ZP_07161800.1| glycine cleavage system T protein [Escherichia coli MS 116-1] gi|300954252|ref|ZP_07166717.1| glycine cleavage system T protein [Escherichia coli MS 175-1] gi|301303064|ref|ZP_07209191.1| glycine cleavage system T protein [Escherichia coli MS 124-1] gi|301643743|ref|ZP_07243782.1| glycine cleavage system T protein [Escherichia coli MS 146-1] gi|307139593|ref|ZP_07498949.1| glycine cleavage system aminomethyltransferase T [Escherichia coli H736] gi|307310476|ref|ZP_07590124.1| glycine cleavage system T protein [Escherichia coli W] gi|309793978|ref|ZP_07688403.1| glycine cleavage system T protein [Escherichia coli MS 145-7] gi|312972853|ref|ZP_07787026.1| glycine cleavage system T protein [Escherichia coli 1827-70] gi|331643596|ref|ZP_08344727.1| glycine cleavage system T protein [Escherichia coli H736] gi|331669641|ref|ZP_08370487.1| glycine cleavage system T protein [Escherichia coli TA271] gi|332280410|ref|ZP_08392823.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9] gi|121086|sp|P27248|GCST_ECOLI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123558642|sp|Q31WG6|GCST_SHIBS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166989726|sp|A7ZR14|GCST_ECO24 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166989727|sp|A8A446|GCST_ECOHS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|189039313|sp|B1IT97|GCST_ECOLC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226697520|sp|B6I738|GCST_ECOSE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226711371|sp|B7LYG9|GCST_ECO8A RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|254797873|sp|B7LF91|GCST_ECO55 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|259647491|sp|C5A0H7|GCST_ECOBW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|293651790|pdb|3A8I|A Chain A, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex gi|293651791|pdb|3A8I|B Chain B, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex gi|293651792|pdb|3A8I|C Chain C, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex gi|293651793|pdb|3A8I|D Chain D, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex gi|293651796|pdb|3A8J|A Chain A, Crystal Structure Of Et-Ehred Complex gi|293651797|pdb|3A8J|B Chain B, Crystal Structure Of Et-Ehred Complex gi|293651798|pdb|3A8J|C Chain C, Crystal Structure Of Et-Ehred Complex gi|293651799|pdb|3A8J|D Chain D, Crystal Structure Of Et-Ehred Complex gi|148040|gb|AAC36843.1| T-protein [Escherichia coli] gi|403343|emb|CAA52144.1| aminomethyltransferase [Escherichia coli str. K-12 substr. W3110] gi|882435|gb|AAA69073.1| ORF_f364 [Escherichia coli str. K-12 substr. MG1655] gi|1789272|gb|AAC75943.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli str. K-12 substr. MG1655] gi|81246884|gb|ABB67592.1| aminomethyltransferase of glycine cleavage system [Shigella boydii Sb227] gi|85675717|dbj|BAE76970.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli str. K12 substr. W3110] gi|157068045|gb|ABV07300.1| glycine cleavage system T protein [Escherichia coli HS] gi|157078120|gb|ABV17828.1| glycine cleavage system T protein [Escherichia coli E24377A] gi|169753777|gb|ACA76476.1| glycine cleavage system T protein [Escherichia coli ATCC 8739] gi|190900500|gb|EDV60313.1| glycine cleavage system T protein [Escherichia coli B7A] gi|192930854|gb|EDV83459.1| glycine cleavage system T protein [Escherichia coli E22] gi|192956113|gb|EDV86577.1| glycine cleavage system T protein [Escherichia coli E110019] gi|194415525|gb|EDX31792.1| glycine cleavage system T protein [Escherichia coli B171] gi|194424192|gb|EDX40179.1| glycine cleavage system T protein [Escherichia coli 101-1] gi|209913618|dbj|BAG78692.1| aminomethyltransferase [Escherichia coli SE11] gi|218353233|emb|CAU99160.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli 55989] gi|218362221|emb|CAQ99839.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli IAI1] gi|238859980|gb|ACR61978.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli BW2952] gi|242378436|emb|CAQ33217.1| aminomethyltransferase, subunit of glycine cleavage system [Escherichia coli BL21(DE3)] gi|253323298|gb|ACT27900.1| glycine cleavage system T protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974718|gb|ACT40389.1| glycine cleavage system aminomethyltransferase T [Escherichia coli B str. REL606] gi|253978884|gb|ACT44554.1| glycine cleavage system aminomethyltransferase T [Escherichia coli BL21(DE3)] gi|257755677|dbj|BAI27179.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O26:H11 str. 11368] gi|257760721|dbj|BAI32218.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O103:H2 str. 12009] gi|257765938|dbj|BAI37433.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of glycine cleavage complex [Escherichia coli O111:H- str. 11128] gi|260448049|gb|ACX38471.1| glycine cleavage system T protein [Escherichia coli DH1] gi|284922852|emb|CBG35941.1| aminomethyltransferase (glycine cleavage system protein) [Escherichia coli 042] gi|291322318|gb|EFE61747.1| glycine cleavage system T protein [Escherichia coli B088] gi|300318836|gb|EFJ68620.1| glycine cleavage system T protein [Escherichia coli MS 175-1] gi|300401718|gb|EFJ85256.1| glycine cleavage system T protein [Escherichia coli MS 84-1] gi|300418774|gb|EFK02085.1| glycine cleavage system T protein [Escherichia coli MS 182-1] gi|300452745|gb|EFK16365.1| glycine cleavage system T protein [Escherichia coli MS 116-1] gi|300841728|gb|EFK69488.1| glycine cleavage system T protein [Escherichia coli MS 124-1] gi|301077945|gb|EFK92751.1| glycine cleavage system T protein [Escherichia coli MS 146-1] gi|306909371|gb|EFN39866.1| glycine cleavage system T protein [Escherichia coli W] gi|308122385|gb|EFO59647.1| glycine cleavage system T protein [Escherichia coli MS 145-7] gi|309703265|emb|CBJ02600.1| aminomethyltransferase (glycine cleavage system protein) [Escherichia coli ETEC H10407] gi|310332795|gb|EFQ00009.1| glycine cleavage system T protein [Escherichia coli 1827-70] gi|315062209|gb|ADT76536.1| minomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Escherichia coli W] gi|315137504|dbj|BAJ44663.1| glycine cleavage system aminomethyltransferase T [Escherichia coli DH1] gi|315256789|gb|EFU36757.1| glycine cleavage system T protein [Escherichia coli MS 85-1] gi|320184549|gb|EFW59350.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri CDC 796-83] gi|320202566|gb|EFW77136.1| glycine cleavage system aminomethyltransferase T [Escherichia coli EC4100B] gi|323154597|gb|EFZ40796.1| glycine cleavage system T protein [Escherichia coli EPECa14] gi|323162502|gb|EFZ48352.1| glycine cleavage system T protein [Escherichia coli E128010] gi|323173903|gb|EFZ59532.1| glycine cleavage system T protein [Escherichia coli LT-68] gi|323183460|gb|EFZ68857.1| glycine cleavage system T protein [Escherichia coli 1357] gi|323377207|gb|ADX49475.1| glycine cleavage system T protein [Escherichia coli KO11] gi|323936088|gb|EGB32383.1| glycine cleavage system T protein [Escherichia coli E1520] gi|323942004|gb|EGB38183.1| glycine cleavage system T protein [Escherichia coli E482] gi|324119698|gb|EGC13578.1| glycine cleavage system T protein [Escherichia coli E1167] gi|331037067|gb|EGI09291.1| glycine cleavage system T protein [Escherichia coli H736] gi|331063309|gb|EGI35222.1| glycine cleavage system T protein [Escherichia coli TA271] gi|332090930|gb|EGI96021.1| glycine cleavage system T protein [Shigella boydii 3594-74] gi|332102762|gb|EGJ06108.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9] gi|332344802|gb|AEE58136.1| glycine cleavage system protein GcvT [Escherichia coli UMNK88] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|293370789|ref|ZP_06617335.1| aminomethyltransferase [Bacteroides ovatus SD CMC 3f] gi|292634149|gb|EFF52692.1| aminomethyltransferase [Bacteroides ovatus SD CMC 3f] Length = 361 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71 V G A+ FLQ I + +V L + + +G I+ L+ + E + ++L ++ Sbjct: 56 VKGPHALAFLQKITSNNVAALAPGKIQYTCFPNEEGGIVDDLLVYQYEPEKYMLVVNAAN 115 Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115 ++ ++ D + ++ ++ +Q + + L+ +TF +F Sbjct: 116 MEKDWNWCVSHNTEGAELENSSDNIAQLAVQGPKAVLALQKLTDIDLASIPYYTFKVGTF 175 Query: 116 IDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------HELRINHG 152 E I + G E + + Y LR+ G Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPSVADRIWKAVFEAGEEYGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K +I + ++ + + + RK Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKD-FINRPLLEKQKTEGVTRKLVGFEMVDRG 293 Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P G ++ + ++G + + + + + + + ++ Sbjct: 294 IPRHGYELVNAEGEQVGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353 Query: 266 ASFPH 270 P Sbjct: 354 VVKPP 358 >gi|261212793|ref|ZP_05927077.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. RC341] gi|260837858|gb|EEX64535.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio sp. RC341] Length = 376 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 91/287 (31%), Gaps = 50/287 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + ++A + + + + + Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEK 364 >gi|163840467|ref|YP_001624872.1| glycine cleavage system aminomethyltransferase T [Renibacterium salmoninarum ATCC 33209] gi|162953943|gb|ABY23458.1| glycine cleavage system T protein [Renibacterium salmoninarum ATCC 33209] Length = 382 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 72/335 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A++ + + A+ S I TP G I+ + + ED Sbjct: 50 LSHMGEIWVRGAQAAAFLDYALVGN-LSAIQVGKAKYSLICTPDGGIIDDLISYRRAEDV 108 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + D++ + + R+ +V ++ + ++ E + Sbjct: 109 YLVVPNAGNADAVYAE---FVKRAEGFDVELDNVSAQTSLIALQGPEAERILLGLVPAEQ 165 Query: 121 SIA-----------------DVLLHRTWGHNE-------KIASDIKTY------------ 144 + A +LL RT E + + + Sbjct: 166 AEAVRELKYYAATEVTVSGLPILLARTGYTGEDGFELYIDNSEAAQLWNSLLTADEVVTP 225 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRI 194 LR+ + + P +A + L + +G ++G+E +++I Sbjct: 226 CGLASRDSLRLEAAMPLYGNELGLDG-NPFEAGLGPVVSLAPAKTAKEGDFVGKEALAKI 284 Query: 195 QHRN---------IIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KA 238 + ++ + + G G P++ + +G + + A Sbjct: 285 KAERAQTPEGQSVTGKRILVGLQGQGRRAARGHYPVVLNGETVGEVTSGLPSPTLGYPVA 344 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 LA + + + + L +YK Sbjct: 345 LAYVNAEHSEVGTELQVDLRGKTEPFTVVALPFYK 379 >gi|332999661|gb|EGK19246.1| glycine cleavage system T protein [Shigella flexneri VA-6] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLIVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|255080476|ref|XP_002503818.1| glycine cleavage system t-protein [Micromonas sp. RCC299] gi|226519085|gb|ACO65076.1| glycine cleavage system t-protein [Micromonas sp. RCC299] Length = 412 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 100/300 (33%), Gaps = 57/300 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK AI F+++I+ D+ L S + +G I+ +++K+ ++ + ++ + Sbjct: 94 SMRGKDAIEFVESIVVGDIRGLKNGTGTLSVVTNDKGGIIDDTVVTKVNDEDVYIVLNGA 153 Query: 73 KRDSLI----DKLLFYKL------------RS-------NVIIEIQPINGVVLS------ 103 + L +K RS + +QP+ + LS Sbjct: 154 CSEKDQAHINKHLKAFKAKGKDCEFIVHGDRSLLAFQGPKAVDVLQPLTDIDLSKLYFGM 213 Query: 104 -----------WNQEHTFSNSSFIDERFSIAD--VLLHRTWGHNEKIASDIKTYHELRIN 150 W ++ + D L + + + + LR+ Sbjct: 214 FTETSIAGKPVWLTRTGYTGEDGFEISLKKTDTVALTKKLLENPDARMCGLGARDSLRLE 273 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR--NIIRKRPMII 207 G+ D I P +A + G S + C ++G +V+ ++ ++R + Sbjct: 274 AGLCLYGNDL-NEDIGPIEAGLTWTIGKSRREKCDFVGGDVIKAQLETPASVTKRRIGLK 332 Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260 G +GS IL D E+G + A+ + K G L V Sbjct: 333 VGKGAPARAGSKILAPDGAEVGEVTSGGFSPVLQENIAMGYV----LKSHAKAGTELQVE 388 >gi|188494031|ref|ZP_03001301.1| glycine cleavage system T protein [Escherichia coli 53638] gi|188489230|gb|EDU64333.1| glycine cleavage system T protein [Escherichia coli 53638] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|325280446|ref|YP_004252988.1| glycine cleavage system T protein [Odoribacter splanchnicus DSM 20712] gi|324312255|gb|ADY32808.1| glycine cleavage system T protein [Odoribacter splanchnicus DSM 20712] Length = 366 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 31/71 (43%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A +Q + T DV L + S +G I+ L+ + + ++L ++ + Sbjct: 57 IKGPKAFELVQKLTTNDVAALIDGKVQYSCFPNDKGGIVDDLLVYRFSAEKYLLVVNAAN 116 Query: 74 RDSLIDKLLFY 84 + + ++ Y Sbjct: 117 IEKDWNWVVKY 127 >gi|323188697|gb|EFZ73982.1| glycine cleavage system T protein [Escherichia coli RN587/1] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|255647916|gb|ACU24416.1| unknown [Glycine max] Length = 407 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK A+PFL+ ++ ADV L + +G + +I+K+ Sbjct: 79 SLFDVSHMCGLSLKGKDAVPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVT 138 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 +D L ++ ++ L Sbjct: 139 DDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 198 Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + + ING + E F S + +A +L ++ G Sbjct: 199 KEDL-SKLFFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKV 257 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G +V+ + Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 314 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232 +R + + P S S I IG + Sbjct: 315 QLEEGPKIRRVGFFS-SGPPPRSHSEIQDEGGNNIGEITS 353 >gi|170683423|ref|YP_001745057.1| glycine cleavage system aminomethyltransferase T [Escherichia coli SMS-3-5] gi|226711373|sp|B1LDA5|GCST_ECOSM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|170521141|gb|ACB19319.1| glycine cleavage system T protein [Escherichia coli SMS-3-5] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|74313463|ref|YP_311882.1| glycine cleavage system aminomethyltransferase T [Shigella sonnei Ss046] gi|123616236|sp|Q3YXW5|GCST_SHISS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|73856940|gb|AAZ89647.1| aminomethyltransferase of glycine cleavage system [Shigella sonnei Ss046] Length = 364 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|296127963|ref|YP_003635213.1| glycine cleavage system T protein [Cellulomonas flavigena DSM 20109] gi|296019778|gb|ADG73014.1| glycine cleavage system T protein [Cellulomonas flavigena DSM 20109] Length = 401 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 39/77 (50%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I+V G A FL + ++ L AR + I+ P G ++ ++ + +DT+ Sbjct: 64 LSHMGEIEVTGPDAGAFLDRALVGNLTALRVLGARYTMIVQPDGGVIDDLVVYRTGDDTY 123 Query: 66 ILEIDRSKRDSLIDKLL 82 ++ + S + ++ +L Sbjct: 124 LVVANASNHEVVLAELQ 140 >gi|317126682|ref|YP_004100794.1| aminomethyltransferase [Intrasporangium calvum DSM 43043] gi|315590770|gb|ADU50067.1| aminomethyltransferase [Intrasporangium calvum DSM 43043] Length = 366 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 51/311 (16%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A L A++ D+ + A+ + I G IL ++ ++EED Sbjct: 49 LSHMGEIEVVGPQAAALLDHALV-GDISAVAVTKAKYTMICQEDGGILDDLIVYRLEEDR 107 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------- 111 +++ + S ++++ L + ++ + + +++ + Sbjct: 108 YMVVANASNAETVLGALQERAAGFDAEVQDRRDDWALVAIQGPQASAILAELTDADLAGL 167 Query: 112 ------NSSFID--ERFSIADVLLHRTWGHNEKIASDIKTYHE----------------- 146 +S D R + + A + Sbjct: 168 KYYAILETSVADRPARLARTGYTGEDGFEIFSDPADAPAIWEALSAAGADRGLIPAGLAC 227 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ + + T P+ A + + + G ++G++ ++ + + I R R Sbjct: 228 RDSLRLEAAMPLYGNELST-TTTPYAAGLGRVVKLDKPDG-FVGRDALAAVSEQPIQRVR 285 Query: 204 PMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257 + P G ++ +G + +A+A +D+ + + Sbjct: 286 VGLRPEGRRAPRHGYAVIDPASGETVGEVTSGAPSPTLGHPIAMAYVDQALAQPGTRLDV 345 Query: 258 TVHGVRVKASF 268 V G V A Sbjct: 346 DVRGTHVPAEV 356 >gi|301027795|ref|ZP_07191101.1| glycine cleavage system T protein [Escherichia coli MS 196-1] gi|299879129|gb|EFI87340.1| glycine cleavage system T protein [Escherichia coli MS 196-1] gi|320175907|gb|EFW50985.1| glycine cleavage system aminomethyltransferase T [Shigella dysenteriae CDC 74-1112] gi|320182191|gb|EFW57094.1| glycine cleavage system aminomethyltransferase T [Shigella boydii ATCC 9905] gi|323180350|gb|EFZ65902.1| glycine cleavage system T protein [Escherichia coli 1180] gi|323946609|gb|EGB42632.1| glycine cleavage system T protein [Escherichia coli H120] gi|332086830|gb|EGI91966.1| glycine cleavage system T protein [Shigella boydii 5216-82] Length = 347 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142 >gi|323971745|gb|EGB66973.1| aminomethyltransferase folate-binding domain-containing protein [Escherichia coli TA007] Length = 153 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 63 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 122 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 123 RLVVNSATREKDLSWITQHA 142 >gi|301099343|ref|XP_002898763.1| aminomethyltransferase [Phytophthora infestans T30-4] gi|262104836|gb|EEY62888.1| aminomethyltransferase [Phytophthora infestans T30-4] Length = 406 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 103/268 (38%), Gaps = 43/268 (16%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ +++ GK + FL++++ D+ L A+ S I QG I+ ++S+ Sbjct: 62 SLFDVSHMGQLRITGKDRLQFLESVVVGDLQALGSGEAKLSLITNDQGGIIDDCVVSRY- 120 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKL---------------RSNVIIEIQPINGVVLSWNQ 106 +D + ++ +D + +KL R+ V ++ VV + N Sbjct: 121 DDHLYVVVNAGNQDVDLVH--MHKLSEGFKGDASIERIQDRALVALQGPGAVDVVETLNP 178 Query: 107 EHTFSNSSFIDERFS--------IADVLLHRTWGHNEK------IASDIKTY-----HEL 147 + F+ F+ DV+L R E ++ D +T+ + Sbjct: 179 NVNLKDLEFMHGVFTPLKLKDGKQVDVILTRCGYTGEDGFEISVLSKDAETFARALLDDE 238 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS-RIQHRNIIRKRPM 205 R+ G+ D I P +A + G +G + G ++ +++++ +KR Sbjct: 239 RV-AGLCLHGHDIT-DKITPIEATLAWTIGKRRREEGGFPGHSIIMDQLKNKTATKKRVG 296 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232 + G+ + DD +G + Sbjct: 297 FVV-DGAAAREGAELFDADDNVVGHVTS 323 >gi|195386654|ref|XP_002052019.1| GJ23941 [Drosophila virilis] gi|194148476|gb|EDW64174.1| GJ23941 [Drosophila virilis] Length = 414 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 85/275 (30%), Gaps = 57/275 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72 V GK A L++I TAD+L +P + QG IL +++K+ + + + + Sbjct: 89 VRGKDAAACLESICTADILDMPAGSGSLTVFTNDQGGILDDLIVNKVSDKELYVVSNAAM 148 Query: 73 -----------------------------------------KRDSLIDKL---------L 82 L L Sbjct: 149 KQQDMQIMTAAVSNFKSQGKDVSIEFLSPAHQSLIAVQGPQAAQELSKLLPQPKAKALEQ 208 Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 Y +RS + E+ I+ V ++ +T + I + + L + + + Sbjct: 209 LYFMRSGI-FELAGISNVRIT-RCGYTGEDGVEISVPSTQVETLTEALLAAGQLKLAGLG 266 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201 LR+ G+ +D T P +A + L + G + + + R Sbjct: 267 ARDSLRLEGGLCLYGSDIDAQTT-PVEAALAWLVAKRRRSTSDFPGAQTILQQLKEGAQR 325 Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV 234 +R + PP +G I + ++G L Sbjct: 326 RRVGLQMLGAKAPPARAGVAIFSGGKQVGQLTSGC 360 >gi|1707878|sp|P54260|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|438254|emb|CAA81081.1| T-protein [Solanum tuberosum] Length = 406 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 89/280 (31%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK IPFL+ ++ ADV L + +G + +++K+ Sbjct: 79 SLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVT 138 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 D L ++ ++ L Sbjct: 139 NDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHIHDERSLLALQGPLAAPVLQYLT 198 Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + + ING + E F S + +A LL ++ G Sbjct: 199 KDDL-SKMYFGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKI 257 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D T P +A + G +G ++G EV+ + Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDMEQHTT-PVEAGLTWAIGKRRRAEGGFLGAEVILK 314 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 +R + + P S S I ++ IG + Sbjct: 315 QIEEGPKIRRVGFFS-SGPPPRSHSEIQDSNGQNIGEITS 353 >gi|163746880|ref|ZP_02154237.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus indolifex HEL-45] gi|161379994|gb|EDQ04406.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus indolifex HEL-45] Length = 1005 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 29/68 (42%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + G ++ ++++++E TF+ Sbjct: 679 VRGPDAARFLDMLYTNMMSTLKPGKCRYGLMCNENGFLIDDGVVARLDEQTFLCHTTTGG 738 Query: 74 RDSLIDKL 81 DS+ + Sbjct: 739 ADSIHAHM 746 >gi|323168052|gb|EFZ53741.1| glycine cleavage system T protein [Shigella sonnei 53G] Length = 347 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142 >gi|153217258|ref|ZP_01951022.1| glycine cleavage system T protein [Vibrio cholerae 1587] gi|124113713|gb|EAY32533.1| glycine cleavage system T protein [Vibrio cholerae 1587] Length = 376 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GVVTSGTAG 326 >gi|300936029|ref|ZP_07150977.1| glycine cleavage system T protein [Escherichia coli MS 21-1] gi|300458821|gb|EFK22314.1| glycine cleavage system T protein [Escherichia coli MS 21-1] Length = 364 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTRSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|297518394|ref|ZP_06936780.1| glycine cleavage system aminomethyltransferase T [Escherichia coli OP50] Length = 364 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV+ L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVVKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|109899893|ref|YP_663148.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas atlantica T6c] gi|123360344|sp|Q15PU4|GCST_PSEA6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|109702174|gb|ABG42094.1| glycine cleavage system T protein [Pseudoalteromonas atlantica T6c] Length = 359 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +L+ ++ DV L A S +L +G ++ ++ E + Sbjct: 50 SHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R +D L +V I +P ++ + Sbjct: 110 RLVVNSATRQKDMDWLNAQAEGFDVTITERPEFAMIAVQGPQA 152 >gi|323448967|gb|EGB04859.1| hypothetical protein AURANDRAFT_31886 [Aureococcus anophagefferens] Length = 874 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 112/319 (35%), Gaps = 65/319 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ-GKILLYFLISKIEEDTF 65 S+ + + V G+ A +Q + DV + A + +L + G ++K+ +D F Sbjct: 534 SSFAKLLVKGRDAEACMQRLCCGDVSVV--DRAVYTGMLNAEGGGYESDCTVTKLGDDEF 591 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEH---------------- 108 ++ D + + L + +++ V+ E Sbjct: 592 LVVSPTGSATRDADWIRRH-LTGDATLVDVSNQLAVLAVMGPESLNLLKACVTQPSVFDD 650 Query: 109 ----------TFSNSSFIDERFSIADVLLHRTW---------------GHNEKIASDIKT 143 +S +R + L + E ++D++ Sbjct: 651 FPFGASRALDIGHAASVRAQRITYVGELGFELYVPVESAAHVYRSLHAASAEHPSADLRD 710 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR + P + P +A + I +K +IG++ +++++ Sbjct: 711 CGYYAIDSLRTEKAYRAWGHELDP-FVTPFEAGLGFT--IDWSKD-FIGKDALAKLKKEP 766 Query: 199 IIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVV------GKKALAIARIDK--VDH 249 + ++ + T +DLP G P+L D +G + G+ ALAI + + V Sbjct: 767 LKQRVVALHTHEEDLPIWGNEPVLRDGELVGNVTTANYAHSLGGQVALAIVKHPEVGVKG 826 Query: 250 AIKKGM-ALTVHGVRVKAS 267 +K G + V G R+KA+ Sbjct: 827 FVKAGTYEIDVGGTRLKAT 845 >gi|297157023|gb|ADI06735.1| glycine cleavage system aminomethyltransferase T [Streptomyces bingchenggensis BCW-1] Length = 373 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 99/309 (32%), Gaps = 56/309 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I + G A L + + L AR + I G IL ++ ++ E F Sbjct: 54 LSHMGEITLTGPQAGAALDRALVGHLSALAVGRARYTMICDADGGILDDLIVYRLGEQEF 113 Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120 ++ + S ++D L+ L + V + + ++ + D Sbjct: 114 LVVANASNAQVVLDALIERAEGLDAAVR-DDREAYALIAVQGPASAAILAGLTDADLDGL 172 Query: 121 ----------SIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146 + L+ RT E + + Sbjct: 173 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPGDAERLWQALTEAGAPAGLVPCGLSC 232 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG-QEVVSRIQHRNIIR 201 LR+ G+ + T P DA + + + K G ++G Q + + + Sbjct: 233 RDTLRLEAGMPLYGHELTRGTT-PFDAGLGRV--VKFDKPGDFVGRQALEAAARRAETAP 289 Query: 202 KRPMI--ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAI-KK 253 R ++ + +P +G ++ D IG + L AIA +D A Sbjct: 290 PRVLVGLVAAGRRVPRAGYAVVGADGAVIGEVTSGAPSPTLGKPIAIAYVDAAHAAPGTA 349 Query: 254 GMALTVHGV 262 G+++ + G Sbjct: 350 GVSVDIRGT 358 >gi|229522959|ref|ZP_04412373.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae TM 11079-80] gi|229340176|gb|EEO05184.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae TM 11079-80] Length = 376 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GVVTSGTAG 326 >gi|87300391|gb|ABD37382.1| GcvT [Shigella boydii] gi|87300393|gb|ABD37383.1| GcvT [Shigella dysenteriae] gi|87300401|gb|ABD37387.1| GcvT [Shigella boydii] gi|87300403|gb|ABD37388.1| GcvT [Shigella boydii] gi|87300427|gb|ABD37400.1| GcvT [Shigella boydii] gi|87300435|gb|ABD37404.1| GcvT [Shigella boydii] Length = 138 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|291237444|ref|XP_002738645.1| PREDICTED: CG6415-like [Saccoglossus kowalevskii] Length = 414 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 89/311 (28%), Gaps = 59/311 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK I F++++I DV LP S +G I ++SK ED + + Sbjct: 96 KVYGKDRIQFIESLIVGDVAGLPDNTGTLSLFTNHKGGIQDDLIVSKTTEDYLYIVSNAG 155 Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVL------------------------- 102 D I + ++ V E ++ Sbjct: 156 CIDKDIANMKAQEVAMKSQGFDVTFEPITDRALLALQGPLMTKVLQNGIRSDLKDFTFMK 215 Query: 103 -----------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 + E S I + D L+ E + + Sbjct: 216 TAEMSVYGVPNCRVTRCGYTGEDGVEISIPIKHVLEVVDSLMSCQLA--EVKLAGLGARD 273 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D P +A + + + G E++ + Q + +++ Sbjct: 274 SLRLEAGLCLYGNDI-DEDTTPIEATLAWTIAKRRRQESNFPGAEIILK-QLKEKPKRKR 331 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 + I + +G+ IL + IG L A+ + K + + Sbjct: 332 VGIVSSGPPARAGTQILDESGEPIGHLTSGCPSPTLKKNVAMGYVTTKHAKNGTKLKLQV 391 Query: 258 TVHGVRVKASF 268 + + Sbjct: 392 RKKQIDAQVCK 402 >gi|123969429|ref|YP_001010287.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. AS9601] gi|166221564|sp|A2BTR9|GCST_PROMS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123199539|gb|ABM71180.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. AS9601] Length = 370 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 52/305 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ I + G + ++Q + ++ + + +L +G I+ +I K + Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFCEGQGLYTVMLNDKGGIIDDLIIYDLGIQKND 110 Query: 62 EDTFILEIDRSKRDSLIDK----LLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109 +L ++ S+ + L ++ + V++ +Q N G+ W + Sbjct: 111 ISELLLIVNASRYEEDFQWIKNNLNMSEISITNFKKDKVLLALQGKNSFGLFEEWIESSI 170 Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144 +F I + FS + I + Sbjct: 171 SHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFLISKNVAPCG 230 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D T P++A + L + +IG+ V+ I Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FIGRRVLEEQSRLGIQ 288 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 +K + + G +L D IGT+ +A+A A I+ I + Sbjct: 289 KKLVGLSIKGKAIGRKGCAVLKGDENIGTITSGSWSPTKHQAIAFAYINTSHALINNEVE 348 Query: 257 LTVHG 261 + + G Sbjct: 349 ILIRG 353 >gi|229514758|ref|ZP_04404219.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae TMA 21] gi|229348738|gb|EEO13696.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae TMA 21] Length = 376 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFKEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GVVTSGTAG 326 >gi|221116132|ref|XP_002161350.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 378 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ + FL+ ++ AD+ + S + +G I+ +I D + + Sbjct: 66 IHGRDRVKFLEELVVADIKNMSENAGGLSLFMNAKGGIIDDCII-NNAGDHIYVVSNAGC 124 Query: 74 RDSLIDKLLFYKLRSNVIIEIQ 95 + + L ++I Sbjct: 125 AYKIKPLIEMQFLHRKTELDID 146 >gi|209546041|ref|YP_002277931.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538898|gb|ACI58831.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 789 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 60/297 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +V G A LQ +T DV L SA+ G ++ + ++ + Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516 Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96 F + + ++ L K R II P Sbjct: 517 NFRWIGGDDFSGVWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574 Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139 + + + F + + R L + + H + + Sbjct: 575 QPTIGELEWFRFTVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDGVWEAGQP 634 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +RI G++ + +F T P +A + + + +IG++ + R Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGRDALIR 693 Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + R + + ++ G + ++G + K +A+ARID Sbjct: 694 --RKEHPRHLLVGLDVKANEAVGHGDCVHIGRAQVGVVTSATRSPILGKTIALARID 748 >gi|324115076|gb|EGC09041.1| glycine cleavage system T protein [Escherichia fergusonii B253] Length = 364 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDFSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|171058244|ref|YP_001790593.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6] gi|170775689|gb|ACB33828.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6] Length = 374 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 54/292 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L++++ DV+ L R + G +L +I++ E+D F+ Sbjct: 56 SHMGQVRLIGSDADRALESLVPVDVVDLAIGKQRYAFFTNEAGGLLDDLMITRREDDLFL 115 Query: 67 LEIDRSKRDSLIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF--- 115 + ++ + + I L+ + + + ++ +Q V + +F Sbjct: 116 V-VNAGCKAADIRHLITHIGHRCQIVPMPDHALLALQGPQAVTALARLNAGVAGLTFMSG 174 Query: 116 ------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 I + A L E + + LR+ Sbjct: 175 GHFALAGADCFVTRSGYTGEDGFEISVPATHAVALARSLLAQPEVQPAGLGARDTLRLEA 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D ++ P +A + G G Y G +V+ + KR Sbjct: 235 GLCLYGHDI-HASTTPVEAGLTWAIQKVRRPGGA--RAGGYPGAKVIEGQLAQGPSHKRV 291 Query: 205 MIITGTDDLPPSGSPIL--TDDIEIGTLG------VVVGKKALAIARIDKVD 248 ++ G+ ++ ++GT+ V A+A + Sbjct: 292 GLVGLERAPVREGATLVDNHGSHKLGTVTSGTTGPSVNQPIAMAYVATNHAG 343 >gi|153827552|ref|ZP_01980219.1| glycine cleavage system T protein [Vibrio cholerae MZO-2] gi|149738485|gb|EDM52881.1| glycine cleavage system T protein [Vibrio cholerae MZO-2] Length = 376 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFS------ 121 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 122 --------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 A L + G E + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTGFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GIVTSGTAG 326 >gi|153829058|ref|ZP_01981725.1| glycine cleavage system T protein [Vibrio cholerae 623-39] gi|148875487|gb|EDL73622.1| glycine cleavage system T protein [Vibrio cholerae 623-39] Length = 376 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 84/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEINGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GVVTSGTAG 326 >gi|124003958|ref|ZP_01688805.1| glycine cleavage system T protein [Microscilla marina ATCC 23134] gi|123990537|gb|EAY30017.1| glycine cleavage system T protein [Microscilla marina ATCC 23134] Length = 365 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 90/284 (31%), Gaps = 52/284 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ A+ +Q + + D L + S + QG I+ +I I E+ + Sbjct: 56 SHMGEFLLKGEGALDLIQKVSSNDASKLYPGRVQYSCLPNDQGGIVDDLVIYMIAENEYY 115 Query: 67 LEIDRSKRD-----------------SLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEH 108 L ++ S +L D+ ++ +Q + V L + + Sbjct: 116 LVVNASNVQKDWDWISKHNTYGVEMTNLSDQTSMLAIQGPKATQALQSLTDVKLDDMKFY 175 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTYH---------- 145 TF ++F I + G E KI K YH Sbjct: 176 TFEKATFAGVPDVIISATGYTGLGGVELYVPNEHAETIWNKIFEAGKDYHIQAIGLGARD 235 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK ++ E + + + + RK Sbjct: 236 TLRLEKGYCLYGNDI-DDTTSPLEAGLGWV--TKFTKD-FVNSEALKKQKEEGVKRKLVA 291 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIA 242 +P G +L TD IG + L Sbjct: 292 FKMVDKGIPRHGYELLDTDGKNIGKVTSGSMSPSLNIGIGLGYV 335 >gi|325285204|ref|YP_004260994.1| Aminomethyltransferase [Cellulophaga lytica DSM 7489] gi|324320658|gb|ADY28123.1| Aminomethyltransferase [Cellulophaga lytica DSM 7489] Length = 361 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 99/316 (31%), Gaps = 53/316 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + + D L A+ S + G I+ ++ K++++ ++ Sbjct: 49 SHMGEFLIEGPNALDLIQKVTSNDASKLVVGKAQYSCLPNETGGIVDDLIVYKLKDEQYL 108 Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------NVIIEIQPINGVVLSWNQE 107 L ++ S D + + Y ++R+ I +Q + V L+ + Sbjct: 109 LVVNASNIDKDWNHISKYNETINAEMRNISEGYSLLAIQGPKAIEAMQSVTSVDLAAIKF 168 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-----------------------IKTY 144 +TF + F I + G E + + Sbjct: 169 YTFEVADFAGIDNVIISATGYTGSGGFEIYCKNEDVKQIWDNVFKAGLDFGIAPIGLAAR 228 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 LR+ G D +T P +A + + TK ++ E ++ + RK Sbjct: 229 DTLRLEMGYCLYGNDINDNTS-PFEAGLGWI--TKFTKD-FVNSEALAEQKANGTERKLI 284 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257 +P I+ D +IG + L + + + Sbjct: 285 AFELTERGIPRHDYDIVDADGAKIGVVTSGTMSPSLNKGIGLGYVPTALSSAGTEIFIQI 344 Query: 258 TVHGVRVKASFPHWYK 273 V +YK Sbjct: 345 RKKAVAATVVKLPFYK 360 >gi|256072831|ref|XP_002572737.1| aminomethyltransferase [Schistosoma mansoni] gi|238657901|emb|CAZ28969.1| aminomethyltransferase [Schistosoma mansoni] Length = 450 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + +YL ++V GK + FL+++ AD+ LP S L G IL +I K + Sbjct: 112 TYIYLQQ---MQVSGKDRVSFLESLTCADIEELPISSGTLSVFLLNSGGILDDTIIMKCK 168 Query: 62 EDTFILEIDRSKRDSLIDKLL 82 E + + + +I + Sbjct: 169 EPYLYIVSNAACSSKIIAHVT 189 >gi|87300429|gb|ABD37401.1| GcvT [Shigella boydii] Length = 138 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVNLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|265762735|ref|ZP_06091303.1| glycine cleavage system T protein [Bacteroides sp. 2_1_16] gi|263255343|gb|EEZ26689.1| glycine cleavage system T protein [Bacteroides sp. 2_1_16] Length = 361 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|302527130|ref|ZP_07279472.1| FAD dependent oxidoreductase [Streptomyces sp. AA4] gi|302436025|gb|EFL07841.1| FAD dependent oxidoreductase [Streptomyces sp. AA4] Length = 807 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 48/265 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 ++V G ++ FLQ + T + + +L G + ++++E + F + Sbjct: 497 VEVSGPGSLEFLQGLTTNQLAK-SVGSVTYTLMLDDAGGVRSDITVARLEPELFQVGING 555 Query: 68 -----------------------------------EIDRSKRDSLIDK--LLFYKLRSNV 90 ++ + + L +++ R Sbjct: 556 NIDVAYLRSRAPEGVRVVDTTGGTCCIGVWGPLARDLVQPLSAEDLSHTGLKYFRGRR-A 614 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 I P+ + LS+ E + + D + D L R IA+ ++ LR+ Sbjct: 615 RIAGVPVTILRLSYVGELGWEIYTSADNGQRLWDAL-WRAGQSLGVIAAGRGAFNSLRLE 673 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMIITG 209 G TD P++A + + KG ++G+ + R + R R + + Sbjct: 674 KGYRLWGTDMTTEHD-PYEAGVGF--AVRPAKGEFVGRAAIEGRSEETAARRLRCLTVDD 730 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234 + P+ D G + Sbjct: 731 GRTVVLGKEPVFVDGAAAGYVTSAA 755 >gi|254454805|ref|ZP_05068242.1| glycine cleavage T protein [Octadecabacter antarcticus 238] gi|198269211|gb|EDY93481.1| glycine cleavage T protein [Octadecabacter antarcticus 238] Length = 380 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 100/308 (32%), Gaps = 73/308 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A F+Q + D+ + + I G +L ++ ++ E+ F + + D Sbjct: 67 VEITGPDAAKFVQILTPRDLSKMAVGQCKYILITNADGGLLNDPILLRLAENHFWISLAD 126 Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90 +S++D L +Y LR Sbjct: 127 SDILLWAQGVAVHSGMDVQIVEPDVSPLQLQGPNSGLIMQELFGESIMD-LKYYWLR--- 182 Query: 91 IIEIQPINGVVL--SWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 +E+ I VV W+ E S + ER A + GH I Sbjct: 183 EVELDGIPLVVSRTGWSSELGYELYLRDGSRGDLLWERIMAAGMEYGLKPGHTSSI---- 238 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI G++ + D T P++ D L + + +IG+ + RI+ R Sbjct: 239 -----RRIEGGMLSYHADADIHT-NPYELGFDRLVNLDMDAD-FIGKAALRRIKDEGPKR 291 Query: 202 KRPMIITGTDDLPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258 K+ ++ + L + I +IG + V R++K Sbjct: 292 KQVGLVIDCEPLTGPNTMFWTINQGGADIGKVTSAVYSP-----RLEKNIALAMVAADAA 346 Query: 259 VHGVRVKA 266 V G V+ Sbjct: 347 VIGAEVEV 354 >gi|149913153|ref|ZP_01901687.1| aminomethyltransferase, glycin cleavage system T protein [Roseobacter sp. AzwK-3b] gi|149813559|gb|EDM73385.1| aminomethyltransferase, glycin cleavage system T protein [Roseobacter sp. AzwK-3b] Length = 405 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 I+V G A F+ +IT D + + + + +G IL ++ +++ D F Sbjct: 66 IRVRGPDAEAFVNRVITRDATKIAPMRGKYTILCNEKGGILNDPVLLRLDRDEFW 120 >gi|53712595|ref|YP_098587.1| glycine cleavage system aminomethyltransferase T [Bacteroides fragilis YCH46] gi|60680808|ref|YP_210952.1| glycine cleavage system aminomethyltransferase T [Bacteroides fragilis NCTC 9343] gi|253563379|ref|ZP_04840836.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 3_2_5] gi|59797696|sp|Q64WS3|GCST_BACFR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|81316124|sp|Q5LFT6|GCST_BACFN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|52215460|dbj|BAD48053.1| putative aminomethyltransferase [Bacteroides fragilis YCH46] gi|60492242|emb|CAH07007.1| putative aminomethyltransferase [Bacteroides fragilis NCTC 9343] gi|251947155|gb|EES87437.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 3_2_5] gi|301162305|emb|CBW21850.1| putative aminomethyltransferase [Bacteroides fragilis 638R] Length = 361 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|237839053|ref|XP_002368824.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma gondii ME49] gi|211966488|gb|EEB01684.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma gondii ME49] Length = 988 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI 38 V + + F++V G A FLQ ++T D+ L Sbjct: 53 LVAVPKRRFLRVEGPDAASFLQGLVTQDLRYLESPH 88 >gi|315446061|ref|YP_004078940.1| glycine cleavage system protein T (aminomethyltransferase) [Mycobacterium sp. Spyr1] gi|315264364|gb|ADU01106.1| glycine cleavage system T protein (aminomethyltransferase) [Mycobacterium sp. Spyr1] Length = 763 Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 95/293 (32%), Gaps = 57/293 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A LQA +T D+ L SA+ + G ++ + ++ ++ F Sbjct: 432 LSALRKFEVLGPDAEALLQATLTRDIRRLSRGQVVYSAMCSESGGVVDDCTVLRLGDNNF 491 Query: 66 IL---EIDRSK-RDSLIDKLLFYKLRSNVI------IEIQP------INGVVLSWNQEHT 109 + + ++L +++ + IQ ++G++ + + Sbjct: 492 RFIGGDPHGGVWLRTQAERLGLHQVWIKDSTDQMHNLAIQGPASRAVLDGLIWTPPGQPA 551 Query: 110 F----------------SNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139 + + R L + W H + Sbjct: 552 LRDLGWFRFLTGRLDGPDGAPLLVSRTGYTGELGYEVWVHPGDAETLWDRLWDAGRPHGL 611 Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 ++ +RI G+V +F T P +A + + ++G+ + ++ Sbjct: 612 TPLGLEALEMVRIEAGLVAGGHEFDDQTD-PFEAGIGFTVPLKTKTDDFVGR--AALVER 668 Query: 197 RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 + ++ + + ++ G + ++G + ++A+ RI Sbjct: 669 KAHPQRTLVGLRLDSNETTAQGDCVHLGRTQVGVVTSATRSPLLGASIALCRI 721 >gi|282861232|ref|ZP_06270297.1| glycine cleavage system T protein [Streptomyces sp. ACTE] gi|282563890|gb|EFB69427.1| glycine cleavage system T protein [Streptomyces sp. ACTE] Length = 371 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 103/309 (33%), Gaps = 57/309 (18%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ + V G A FL A++ + T+ AR + I+ G IL ++ ++ E Sbjct: 52 LSHMGEVGVSGPQAAAFLNHALVGN-IATVGVGRARYTMIVAEDGGILDDLIVYRLGETE 110 Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSNVI----------IEIQPING 99 +++ + ++D L Y L + V + ++G Sbjct: 111 YMVVANAGNAQLVLDTLTERVAGFDAEVRDDRDAYALLA-VQGPASPAVLKSVTDADLDG 169 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIK 142 + T + + R + E + + Sbjct: 170 LKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWKALTEAGAPHGLVPCGLS 229 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI-- 199 LR+ G+ + + + P +A + + + K G ++G+E + R Sbjct: 230 CRDTLRLEAGMPLYGHELTTA-LTPFEAGLGRV--VKFEKEGDFVGREALRAAAERAETA 286 Query: 200 -IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI-KK 253 RK ++ +P +G ++ +G + L A+A +D A + Sbjct: 287 PPRKLVGLVARGRRVPRAGFAVVVAGETVGEVTSGAPSPTLGKPIAMAYVDAAHAAPGTE 346 Query: 254 GMALTVHGV 262 G+A+ + G Sbjct: 347 GVAVDIRGT 355 >gi|227822099|ref|YP_002826070.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234] gi|227341099|gb|ACP25317.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234] Length = 474 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 85/300 (28%), Gaps = 51/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ DVL L R P G IL +I+ D L ++ + +D+ Sbjct: 166 ADAALALERLVPVDVLGLAEGRQRYGLFTNPDGGILDDLMIANRG-DHLFLVVNAACKDA 224 Query: 77 LIDKLL--------FYKLRSNVIIEIQPINGVVL---SWNQ----------EHTFSNSSF 115 L L +I +Q + + W E + + Sbjct: 225 DFAHLKEGLGDSCDVTLLDDRALIALQGPHAEAVLCELWADVASMRFMDVAEADLHDVTC 284 Query: 116 IDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 I R R H + +A + LR+ G+ D Sbjct: 285 IISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSLRLEAGLCLYGNDID 344 Query: 162 PSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 T P +A ++ G + G + + R+R + Sbjct: 345 TGTT-PVEAALEWAIQKSRRAGGERAGGFPGADRILAEFAGGTSRRRVGLRPEGRAPVRG 403 Query: 217 GSPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G+ + D + IG++ + G A+ + + + + V S Sbjct: 404 GATLFADADGTVPIGSVTSGGFGPSIDGPVAMGYVETAHAGNGTQIFAEVRGKYLPVTVS 463 >gi|87300425|gb|ABD37399.1| GcvT [Shigella dysenteriae] Length = 138 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGSVIDDLIVYYFTEDFF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|159899387|ref|YP_001545634.1| glycine cleavage system T protein [Herpetosiphon aurantiacus ATCC 23779] gi|238687083|sp|A9B2Q5|GCST_HERA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|159892426|gb|ABX05506.1| glycine cleavage system T protein [Herpetosiphon aurantiacus ATCC 23779] Length = 361 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 45/297 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G + F+Q I T D+ + + G I+ + D +++ + Sbjct: 56 VTGPDSERFIQLIDTFDISKTAIGQSDYGIMCYEDGGIVDDIFTYHLGPDEWMVVANAGN 115 Query: 74 RDS----LIDKLLFYKL----RSN----------------VIIEIQPINGVVLSWNQEHT 109 + L Y + RS + + + + T Sbjct: 116 AEKDWAWLNQHTAGYDVVLTDRSQELAMIALQGPKAESLLAPLTDADVVNLAFHGITKAT 175 Query: 110 FSNSSFIDERFSIADVL----------LHRTWGHNEKIASD---IKTYHELRINHGIVDP 156 ++ R + R W ++ + + LR G+ Sbjct: 176 VEGAAGYISRTGYTGEDGFELFLPAGEIERIWDRLLEVGATPIGLGARDSLRFEPGLALY 235 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 + I P++A + + + L KG +IG E + I+ +R + + Sbjct: 236 GHEIERD-INPYEAKLGWV--VKLDKGPFIGSEALHDIKANGPVRTLVGLEMTGRGIARQ 292 Query: 217 GSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G P++ D E+G + K LA A + I + + + V+A+ Sbjct: 293 GYPVVALDGSELGVVTTGMPSPSLGKNLAYALVKAGSLKIGAEVDVLIREKPVRATV 349 >gi|56681813|gb|AAW21506.1| putative aminomethyl transferase protein [Methylophaga aminisulfidivorans] Length = 684 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L+ I + G A+ FLQ ++T +V + SAI G ++ I ++ + F Sbjct: 444 LTPLRKIDITGPDAVAFLQYVLTQNVRRMAVGEIAHSAICLETGGMIDDGTIFRMADQAF 503 >gi|73952357|ref|XP_546052.2| PREDICTED: similar to Dimethylglycine dehydrogenase, mitochondrial precursor (ME2GLYDH) [Canis familiaris] Length = 875 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 98/325 (30%), Gaps = 74/325 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ ++ L + + + S +LTP+G++ +S Sbjct: 541 IDLSPFGKFNIKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 598 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVIIE-IQPINGVVLSWNQEHT--- 109 F+L + LR +V I+ I GV+ Sbjct: 599 EFLLITGSGS--------ELHDLRWIEEEAVNGGYDVEIKNITDELGVLGIAGPHARKVL 650 Query: 110 --FSNSSFIDE--------------------RFSIADVLLHRTWGHNEKIAS-------- 139 + D+ R S L + E A+ Sbjct: 651 QKLTAEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIVMDA 710 Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189 + TY + LR+ ++ T P +A +D I L K +IG++ Sbjct: 711 GQEEGIDNFGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQ 767 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIA 242 + +I+ + + R+ + TDD+ P G+ I D +G + A A Sbjct: 768 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWFDGKVVGNTTSGTYSYSIQKSLAFAYV 827 Query: 243 RIDKVDHAIKKGMALTVHGVRVKAS 267 I+ + + L Sbjct: 828 PIELSKVGQQVEVELLGRNYPASII 852 >gi|221502120|gb|EEE27864.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma gondii VEG] Length = 967 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI 38 V + + F++V G A FLQ ++T D+ L Sbjct: 53 LVAVPKRRFLRVEGPDAASFLQGLVTQDLRYLESPH 88 >gi|89891313|ref|ZP_01202819.1| aminomethyltransferase, glycine cleavage complex protein T [Flavobacteria bacterium BBFL7] gi|89516344|gb|EAS19005.1| aminomethyltransferase, glycine cleavage complex protein T [Flavobacteria bacterium BBFL7] Length = 360 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 36/78 (46%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A+ +Q + + D L A+ + + G I+ ++ KI+ED ++ Sbjct: 49 SHMGEFLISGPEALNLVQKVSSNDASKLTVGRAQYAYLPNETGGIVDDMIVYKIKEDQYL 108 Query: 67 LEIDRSKRDSLIDKLLFY 84 L ++ S D D + + Sbjct: 109 LVVNASNIDKDWDHITKH 126 >gi|115657906|ref|XP_785085.2| PREDICTED: similar to Aminomethyltransferase [Strongylocentrotus purpuratus] gi|115961663|ref|XP_001187387.1| PREDICTED: similar to Aminomethyltransferase [Strongylocentrotus purpuratus] Length = 391 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK + F++++ ADV L S + G I+ +I++ ED + + Sbjct: 71 RIYGKDRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAG 130 Query: 73 KRDSLIDKLL 82 D + Sbjct: 131 CADKDQAHIK 140 >gi|115642063|ref|XP_001204364.1| PREDICTED: similar to Aminomethyltransferase, partial [Strongylocentrotus purpuratus] gi|115660595|ref|XP_001201403.1| PREDICTED: similar to Aminomethyltransferase, partial [Strongylocentrotus purpuratus] Length = 154 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK + F++++ ADV L S + G I+ +I++ ED + + Sbjct: 58 RIYGKDRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAG 117 Query: 73 KRDSLIDKLL 82 D + Sbjct: 118 CADKDQAHIK 127 >gi|94500172|ref|ZP_01306706.1| putative aminomethyltransferase [Oceanobacter sp. RED65] gi|94427745|gb|EAT12721.1| putative aminomethyltransferase [Oceanobacter sp. RED65] Length = 397 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 18/179 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S +KV G A L ++ DV + + + IL +G+I+ + ++DT+I Sbjct: 45 SHYSKVKVEGDEAFDLLDLVVAGDVAEIRDEQTLYTVILNDEGEIITDLYVMN-DDDTYI 103 Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 L + DSLI L YK L +V IE + +++ +++ ++ + D Sbjct: 104 LLCEHITADSLIALLEPYKEDL-DDVEIEDLTKSHAMIAVEGPYSWELATEVY----GMD 158 Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 V+ + IA D T+ HG +F + P D +L + KG Sbjct: 159 VIG---IPFHGFIALDEDTFILRAGKHG------EFGYKVVLPVDQAQELWDTFE-EKG 207 >gi|312963748|ref|ZP_07778219.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6] gi|311281783|gb|EFQ60393.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6] Length = 360 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L +G ++ ++ + E + Sbjct: 50 SHMTVIDVTGPQAREWLRHLLANDVDRLHGCGRALYSAMLNERGGVVDDMIVYRT-ETGY 108 Query: 66 ILEIDRSKRD 75 L ++ + RD Sbjct: 109 RLVVNAATRD 118 >gi|254501330|ref|ZP_05113481.1| Glycine cleavage T-protein C-terminal barrel domain [Labrenzia alexandrii DFL-11] gi|222437401|gb|EEE44080.1| Glycine cleavage T-protein C-terminal barrel domain [Labrenzia alexandrii DFL-11] Length = 380 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 101/310 (32%), Gaps = 59/310 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69 +++ G A F+Q + ++ + + I G ++ ++ ++ E+ F + I Sbjct: 67 VEITGPDAAAFVQMLTPRNLSKMAVGQCKYILITNAAGGLINDPILLRLGENHFWISISD 126 Query: 70 ----------------DRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHT 109 D + + + L +S V+ Q I + W++E Sbjct: 127 SDVLLWAQGVAINSGMDVTIGEPDVSPLQLQGPKSGMIMQVLFG-QEIMDLRYYWHREVE 185 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINHGI 153 I R + L + + + ++ T RI G+ Sbjct: 186 LDGIPLIVSRTGWSSELGYELYLRDGSRGDELWEKIMAAGVPLGLQPGHTSSIRRIEGGM 245 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 + + D T P + MD L +S+ +IG+ + RI+ + RK+ ++ G L Sbjct: 246 LSYHADADMQT-NPFELCMDRLVDLSMDAD-FIGKAALQRIREAGVSRKQVGLLIGGAPL 303 Query: 214 PPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH---- 260 + + D IG + V ALA+ G L V Sbjct: 304 RGPNTTFWTVRKDGAAIGKVTSAVYSPRLQQNIALAMV----SADCDGLGTELQVDIPEG 359 Query: 261 -GVRVKASFP 269 V V P Sbjct: 360 QEVAVIVEKP 369 >gi|126729463|ref|ZP_01745277.1| sarcosine oxidase, alpha subunit family protein [Sagittula stellata E-37] gi|126710453|gb|EBA09505.1| sarcosine oxidase, alpha subunit family protein [Sagittula stellata E-37] Length = 1008 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 81/270 (30%), Gaps = 53/270 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + T G + ++++I+EDTF+ Sbjct: 674 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCTENGFLTDDGVVARIDEDTFL 733 Query: 67 LEIDRSKRDSLIDKL-----------LFY---KLRSNVIIEIQPING------------- 99 D + + Y + I + N Sbjct: 734 CHTTTGGADRIHAHMEEWLQTEWWDWKVYTANVTEAYAQIAVVGPNARNLLEKLGGMDVS 793 Query: 100 ----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYHE-- 146 + W ++ T R S + L + +K+ K Y Sbjct: 794 KEAMAFMEW-KDGTLGGFPVRIYRISFSGELSYEIAVPASQGRALWDKLLEAGKEYDATP 852 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +R G + + T+ P D + IS K YIG+ +R N Sbjct: 853 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKEDYIGKRAQARSYMDN 909 Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIEI 227 R + + + T + P G+ + Sbjct: 910 PDRWQLVGLETVDGSVLPDGAYAASPGRNA 939 >gi|87300419|gb|ABD37396.1| GcvT [Shigella dysenteriae] Length = 138 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|254821881|ref|ZP_05226882.1| glycine cleavage system aminomethyltransferase T [Mycobacterium intracellulare ATCC 13950] Length = 271 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 33/76 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ A +T D+ + A+ + T G ++ + +++D Sbjct: 55 SHLGKALVRGPGAARFVNAALTNDLNRIGPGKAQYTLCCTESGGVVDDLIAYYVDDDEIF 114 Query: 67 LEIDRSKRDSLIDKLL 82 L + + +++D L Sbjct: 115 LVPNAANTAAVVDALQ 130 >gi|83943070|ref|ZP_00955530.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] gi|83846078|gb|EAP83955.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36] Length = 371 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 27/61 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + T D+ R + QG+++ ++ + +D + L I Sbjct: 65 VELSGPDAARLIQYLTTRDMSKTRIGQGRYVPMCDHQGRLINDPVLLMLAQDRYWLSIAD 124 Query: 72 S 72 S Sbjct: 125 S 125 >gi|87300359|gb|ABD37366.1| GcvT [Shigella flexneri] gi|87300361|gb|ABD37367.1| GcvT [Shigella flexneri] gi|87300363|gb|ABD37368.1| GcvT [Shigella flexneri] gi|87300365|gb|ABD37369.1| GcvT [Shigella boydii] gi|87300367|gb|ABD37370.1| GcvT [Shigella flexneri] gi|87300375|gb|ABD37374.1| GcvT [Shigella flexneri] gi|87300379|gb|ABD37376.1| GcvT [Shigella flexneri] gi|87300381|gb|ABD37377.1| GcvT [Shigella dysenteriae] gi|87300383|gb|ABD37378.1| GcvT [Shigella dysenteriae] gi|87300385|gb|ABD37379.1| GcvT [Shigella dysenteriae] gi|87300387|gb|ABD37380.1| GcvT [Shigella dysenteriae] gi|87300389|gb|ABD37381.1| GcvT [Shigella dysenteriae] gi|87300395|gb|ABD37384.1| GcvT [Shigella dysenteriae] gi|87300397|gb|ABD37385.1| GcvT [Shigella boydii] gi|87300405|gb|ABD37389.1| GcvT [Shigella boydii] gi|87300407|gb|ABD37390.1| GcvT [Shigella dysenteriae] gi|87300409|gb|ABD37391.1| GcvT [Shigella boydii] gi|87300411|gb|ABD37392.1| GcvT [Shigella boydii] gi|87300413|gb|ABD37393.1| GcvT [Shigella boydii] gi|87300415|gb|ABD37394.1| GcvT [Shigella boydii] gi|87300417|gb|ABD37395.1| GcvT [Shigella boydii] gi|87300421|gb|ABD37397.1| GcvT [Shigella boydii] gi|87300423|gb|ABD37398.1| GcvT [Shigella boydii] gi|87300437|gb|ABD37405.1| GcvT [Escherichia coli] gi|87300439|gb|ABD37406.1| GcvT [Escherichia coli] gi|87300441|gb|ABD37407.1| GcvT [Escherichia coli] Length = 138 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|89068316|ref|ZP_01155726.1| putative sarcosine oxidase, alpha subunit [Oceanicola granulosus HTCC2516] gi|89046233|gb|EAR52291.1| putative sarcosine oxidase, alpha subunit [Oceanicola granulosus HTCC2516] Length = 993 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 105/323 (32%), Gaps = 65/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TLP R + + G ++ +++++++DT++ Sbjct: 660 STLGKIVVKGPDAGRFLDMLYTNMMSTLPVGRCRYGLMCSENGFLIDDGVVARLDDDTWL 719 Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLRS--------NVI 91 D + + Y K R+ +V Sbjct: 720 CHTTTGGSDRIHAHMEEWLQTEWWDWQVYTANLTEQYAQIAVVGPKARAVLEKLGGMDVS 779 Query: 92 IEI-------------QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138 + QP+ +S++ E ++ ++ R L + Sbjct: 780 ADALKFMDWRDGELGGQPVRVFRISFSGELSYEIATPAG-RGRELWDRLFEAGAEFGVMP 838 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K ++G+ R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLGW--AISKKKDDFLGKRAQERSHMTD 895 Query: 199 IIRKRPM-IITGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDK 246 R + + ++T + P G+ I+ D V G + +A+A + + Sbjct: 896 PNRWQLVGLLTEDGSVLPDGAYIVEDGTNANGQRNVQGRVTSTYHSPTLGRGIAMALLHR 955 Query: 247 VDHAI-KKGMALTVHGVRVKASF 268 + + A V G V A Sbjct: 956 GPARMGEVVEANKVDGGTVAAKV 978 >gi|119504777|ref|ZP_01626855.1| sarcosine oxidase, alpha subunit family protein [marine gamma proteobacterium HTCC2080] gi|119459382|gb|EAW40479.1| sarcosine oxidase, alpha subunit family protein [marine gamma proteobacterium HTCC2080] Length = 966 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 100/318 (31%), Gaps = 57/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S I++ G A F+ I T L P R +A+ QG I+ + +++ ED Sbjct: 638 IDVSTLGGIELRGPDAAEFMNRIYTYGFLKQPVGKTRYAALANEQGVIIDDGVAARLAED 697 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 F + + D + ++L + + + ++I + + N FS Sbjct: 698 HFYVTATTTGVDRVYSEMLRWNAQWRLDLDIAQVTSAYSAVNVAGPFSRDVLEQAGCNIE 757 Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 + I R + + + + + Sbjct: 758 LSSESFPYLACREGMVAGIPARLMRVGFVGELGFELHVPSLMAQTLWDKLMVAGEPFNIK 817 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G + D P + + I+ K ++G+ V + + Sbjct: 818 PFGVETQRLLRLEKGHIIIGQD-TDGMSHPGEVGLAW--AINRKKAFFVGRRSVDILMSQ 874 Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHA 250 + R+ ++ + P G +L D +GT+ LA D Sbjct: 875 PLKRQLVGFTLSPSAPKPEEGHLVLRDGDIVGTVTSCEYSPTLAKVIGLAYVHPDDAQPD 934 Query: 251 IKKGMALTVHGVRVKASF 268 + + T GV V+A Sbjct: 935 SEVTIR-TADGVCVQAPI 951 >gi|258543477|ref|YP_003188910.1| glycine cleavage system protein T [Acetobacter pasteurianus IFO 3283-01] gi|256634555|dbj|BAI00531.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-01] gi|256637613|dbj|BAI03582.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-03] gi|256640665|dbj|BAI06627.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-07] gi|256643722|dbj|BAI09677.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-22] gi|256646777|dbj|BAI12725.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-26] gi|256649830|dbj|BAI15771.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-32] gi|256652818|dbj|BAI18752.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655874|dbj|BAI21801.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO 3283-12] Length = 378 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ AD+ L + R + +G IL +++++ ED +L ++ + +++ Sbjct: 70 DDAALALEKLVPADIAALKHGRQRYTQFTNAKGGILDDLMVARL-EDGLLLVVNAACKEA 128 Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 ++ L +L + ++E+Q ++ E + + F D+ Sbjct: 129 DLELLQ-SELVAECVVELQEDRALLALQGPEAEQTLAVFADD 169 >gi|114767317|ref|ZP_01446140.1| probable glycine cleavage system T protein [Pelagibaca bermudensis HTCC2601] gi|114540570|gb|EAU43644.1| probable glycine cleavage system T protein [Roseovarius sp. HTCC2601] Length = 811 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 85/273 (31%), Gaps = 52/273 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A LQ I D+ P + +L G I ++++ E++F + Sbjct: 493 LEGPDAEAVLQEIAANDMSG-PVGRLTYTQMLNDHGGIEADLTVARLAEESFYIVTGTGF 551 Query: 74 RDSLIDKLLF----------------YKL----------------RSNV----------- 90 D + Y + R++V Sbjct: 552 ATRDFDWIRRGIPEGANARLSDVTSGYAVLSLMGPKARDILARVTRADVSNAALPFGSAA 611 Query: 91 --IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + +S+ E + ++ ++ D L H + + + + LR Sbjct: 612 RIAIAGAPVWALRVSYVGELGWELHLPVEYAATVYDAL-HMAGASHGLVDAGYRAIETLR 670 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G D P + P +A +D + L G + G+ ++ + + KR T Sbjct: 671 LEKGYRAWGGDIGPDST-PLEAGLDF--AVKLDTGAFRGRAAIAAQKAAG-VSKRLATFT 726 Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVVVGKKALA 240 ++ G I + +G L L Sbjct: 727 ADPEVILLGRETIFRNGERVGYLSSGGYGHTLG 759 >gi|91762946|ref|ZP_01264911.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718748|gb|EAS85398.1| putative aminomethyltransferase protein [Candidatus Pelagibacter ubique HTCC1002] Length = 775 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 97/297 (32%), Gaps = 58/297 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS ++ G A +Q +T +V L +A+ G +L + K+ + Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSVGQVVYTAMCYENGCMLDDGTLFKLGQ 501 Query: 63 DTF-ILEIDRSKRDSLIDKLLF--YKLRSN----------------------------VI 91 D F + D + L ++ YK+ + Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKNYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTPPIQ 561 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139 I + + + + + I R L + W H + A Sbjct: 562 PSITELEWFRFNIARIDHETGTPIIISRTGYTGELGYEIWCHPKDAAEVWDKVWEAGKEF 621 Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 ++ +RI G++ +F T P +A + + + +IG+E + I Sbjct: 622 NITPLGLEALDMVRIEAGLIFYGYEFDDQTD-PFEAGIGFTVPLKTKEDDFIGKEEL--I 678 Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV-----VGKKALAIARID 245 + + +K+ + + P G + ++G + +GK +A+ +ID Sbjct: 679 KRKANPQKKLVGLELVGHEPAVNGDCVHVGRGQVGVITSGMLSPKLGKN-IALCKID 734 >gi|229526103|ref|ZP_04415507.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae bv. albensis VL426] gi|254225953|ref|ZP_04919554.1| glycine cleavage system T protein [Vibrio cholerae V51] gi|125621487|gb|EAZ49820.1| glycine cleavage system T protein [Vibrio cholerae V51] gi|229336261|gb|EEO01279.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae bv. albensis VL426] Length = 376 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GIVTSGTAG 326 >gi|301621821|ref|XP_002940239.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 870 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ V GK +I L + + + S ILTP+G++ +S++ Sbjct: 539 IDLTPFGKFTVKGKDSIHLLDHLFANTIPKV--GFTNISHILTPRGRVYAELTVSQLSPG 596 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----IDE- 118 F+L + + +R +I + + + D+ Sbjct: 597 EFLLITGSGSELHDLRWIEEVTVRGKYNTDIANVTDEIGVLGIAGPLARKVLQKLTPDDL 656 Query: 119 -----------------------RFSIADVLLHRTWGHNEKIAS---------------D 140 R S L + + ++ + Sbjct: 657 GNTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGQEEGIDN 716 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ G + T P +A + I L K +IG++ +++I+ + Sbjct: 717 FGTYAMNALRLEKGFRAWGAEMNCDT-NPLEAGLQYF--IKLNKPADFIGKQALTKIKEK 773 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 + RK + TD++ P G+ + + +G A A ++ Sbjct: 774 GLQRKLVYLTLNTDNVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTG 833 Query: 251 IKKGMALTVHGVRVKAS 267 K + L + Sbjct: 834 QKLEVELLGNKYPATVI 850 >gi|86142202|ref|ZP_01060712.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217] gi|85830954|gb|EAQ49411.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217] Length = 360 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 32/60 (53%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G+ A+ LQ + + D+ L A+ + + +G I+ ++ +I E+ ++L ++ S + Sbjct: 58 GEQALELLQKVCSNDISKLKVGGAQYNCLPNNEGGIVDDLIVYRIRENEYLLVVNASNIE 117 >gi|324515608|gb|ADY46258.1| Aminomethyltransferase [Ascaris suum] Length = 402 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 103/309 (33%), Gaps = 54/309 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + GK + F++++ TADV L S +G I +++K + + + Sbjct: 80 HITGKDRVEFIESLTTADVQGLQDNQGTLSVFTNERGGIKDDLIVTKTDLGYIYMVTNAG 139 Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSW--------NQEHTFSNS------ 113 D + L + R V ++ G+V E F S Sbjct: 140 CIDKDLPYLLEKSEEWRKKGKDVEVKPLEGRGLVAVQGPGMAKLLQGETDFDLSKLYFMH 199 Query: 114 SFIDERFSIADVLLHRTWGHNEKIA--------------------------SDIKTYHEL 147 S + F I D + R E + + L Sbjct: 200 STVGTVFGIRDCRVTRCGYTGEDGVEISVEPRYAAELVENLLRSTKEKVRMAGLGARDAL 259 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPM 205 R+ G+ D +T P +A + + + + G E +VS+++ +N ++R Sbjct: 260 RLEAGLCLYGNDIDENTT-PVEAGLAFVVAKRRRQTKDFPGAEVIVSQLEKKNWPKRRVG 318 Query: 206 IITGTDDLPPSGSPILT--DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259 +++ P S PI+ +G + L +A +DK D + K + + Sbjct: 319 LLSDKGRAPRSHLPIIDPISKAVVGFVTSGCPSPNLKKNIGMAYVDKQDSKVGKELMVDF 378 Query: 260 HGVRVKASF 268 G + K + Sbjct: 379 GGRQSKVTV 387 >gi|229527754|ref|ZP_04417145.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae 12129(1)] gi|229334116|gb|EEN99601.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae 12129(1)] Length = 376 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR ++ T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GIVTSGTAG 326 >gi|124026866|ref|YP_001015981.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. NATL1A] gi|166221561|sp|A2C5F7|GCST_PROM1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123961934|gb|ABM76717.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. NATL1A] Length = 372 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 10/139 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ GK+ LQ ++ +DV + A + L G I +I Sbjct: 51 SHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTN 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHTFSNSSFIDE 118 E++ +L I+ ++++S ++ L L S I I P ++ E + ++E Sbjct: 111 EESVVLVINAARKESDVEWLS-SNL-SKKEITISEFMPEGALIAIQGPESISTLEKILEE 168 Query: 119 RFSIADVLLHRTWGHNEKI 137 S HRT N + Sbjct: 169 PLSNLPRFGHRTITSNPNL 187 >gi|332307934|ref|YP_004435785.1| glycine cleavage system T protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175263|gb|AEE24517.1| glycine cleavage system T protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 359 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G+ A +L+ ++ DV L A S +L +G ++ ++ E + Sbjct: 50 SHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L ++ + R +D L +V I +P ++ + Sbjct: 110 RLVVNSATRQKDMDWLNGQAEGFDVTITERPEFAMIAVQGPQA 152 >gi|307136227|gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo] Length = 407 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 80/269 (29%), Gaps = 52/269 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK +IPFL+ ++ ADV L + +G + +I+K+ +D L ++ Sbjct: 89 LSLKGKDSIPFLEKLVVADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148 Query: 72 S---------------------------------------KRDSLIDKLLFYKLRSNV-- 90 ++ L L S + Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQYLTKDDL-SKLYF 207 Query: 91 -IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 I ING + E F S + +A +L ++ G + Sbjct: 208 GEFRILDINGARCFLTRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTG--LGAR 265 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKR 203 LR+ G+ D I P +A + G +G ++G EV+ + +R Sbjct: 266 DSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRRAEGGFLGAEVILKQLEDGPAIRR 324 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + IG + Sbjct: 325 VGFFSSGPPARSHSEIQNEGGKNIGEVTS 353 >gi|189425731|ref|YP_001952908.1| glycine cleavage system protein T [Geobacter lovleyi SZ] gi|189421990|gb|ACD96388.1| glycine cleavage system T protein [Geobacter lovleyi SZ] Length = 366 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 93/276 (33%), Gaps = 48/276 (17%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKL 81 + T + +P ++ +L QG I+ ++ ++ D ++ ++ + + + +L Sbjct: 75 LFTFSISAIPVGRSKYGFLLNEQGGIIDDLIVFRMAADEVMIVVNAATAPNDFKVIQSRL 134 Query: 82 LFYKLRSNVIIEIQPIN-----------GVVLSWNQE--------HTFSNSSFIDERFSI 122 S++ ++ ++ W E T I R Sbjct: 135 KG-GQFSDITAATAKLDLQGPRSREVLVDLLGGWVAEIPYFKFVQQTVLGVPAIVSRTGY 193 Query: 123 ADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 L + + +K+ + + LR+ G +D P Sbjct: 194 TGELGYEIFLPADKVGELWEKLLADERVKPAGLGARDVLRLEVGYSLYGSDI-DEATTPL 252 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228 +A + + L K ++G+E + + Q + + R + + P G I + +IG Sbjct: 253 EADLAAF--VKLDKQ-FVGKEALLKQQKQPLKRVKVAFKVTSRRTPRHGFGIFDGERQIG 309 Query: 229 TLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH 260 + V + + ++ A+ G ALT+ Sbjct: 310 EVTSGVFSPMLGCGIGLGYVEPGYAAL--GTALTIK 343 >gi|332752942|gb|EGJ83326.1| glycine cleavage system T protein [Shigella flexneri 4343-70] gi|333000083|gb|EGK19666.1| glycine cleavage system T protein [Shigella flexneri K-218] Length = 347 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKRGKALYSGMLNASGGVIDDLIVYYFTEDFF 92 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142 >gi|295134431|ref|YP_003585107.1| glycine cleavage system aminomethyltransferase T [Zunongwangia profunda SM-A87] gi|294982446|gb|ADF52911.1| glycine cleavage system aminomethyltransferase T [Zunongwangia profunda SM-A87] Length = 360 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 97/312 (31%), Gaps = 53/312 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G++A+ +Q I + D L A+ + + +G I+ +I ++ + ++ Sbjct: 49 SHMGEFLVTGENALALIQLISSNDASKLVDGQAQYTCMPNEKGGIVDDMIIYRMNAEKYL 108 Query: 67 LEIDRSKRDS----LIDKLLFYK----------LRS----NVIIEIQPINGVVLSWNQEH 108 L ++ + + + L + +Q + V LS + + Sbjct: 109 LVVNAANIEKDWNWISKHNTMDANLTDLSEELSLLAIQGPKAAEAMQSLTDVDLSAMKFY 168 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------H 145 TF +F I + G E K+ K Y Sbjct: 169 TFEIGTFAGMEKVIISATGYTGSGGFEIYFKNECAQEIWDKVMEAGKDYGIQPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK +I E + + + RK Sbjct: 229 TLRLEMGFCLYGNDI-DDTTSPIEAKLGWI--TKFTKD-FINAEALKQEKEEGPKRKLVA 284 Query: 206 IITGTDDLPPSGSPILTDDIEI-GTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G I+ D+ E+ G + L + + K + + Sbjct: 285 FELDERGIPRQGYDIVNDEGEVIGNVTSGTMSPSLEKGIGLGYVKSEYTGFGKKINIQIR 344 Query: 259 VHGVRVK-ASFP 269 V P Sbjct: 345 KKAVSATQVKLP 356 >gi|149187585|ref|ZP_01865882.1| glycine cleavage system protein T2 [Vibrio shilonii AK1] gi|148838465|gb|EDL55405.1| glycine cleavage system protein T2 [Vibrio shilonii AK1] Length = 377 Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 100/272 (36%), Gaps = 44/272 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L++++ D++ LP R + +G I+ +++ + D Sbjct: 59 SHMGQVRLYGENAAKILESLVPVDIIDLPEGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 117 Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 + ++ + ++ I L + ++ +Q + + ++ F+D Sbjct: 118 VVVNAACKEQDITHLEAHLTDGVEMEVIEDRALLALQGPKAAEVLARVQPEVADMLFMDV 177 Query: 119 R----------FSIADVLLHRTW------GHNEKIASDIKTYHE-----------LRINH 151 R S + + + E +A + + E LR+ Sbjct: 178 RKLDINGVECIVSRSGYTGEDGYEISVPSANAEALAKSLTDFEEVEWIGLGARDSLRLEC 237 Query: 152 GIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205 G+ D T P +A + + G + G +++ + I+ +++ RKR Sbjct: 238 GLCLYGHDLDT-TTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRVG 296 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236 ++ T G+ + +D EIG + Sbjct: 297 LVGQTKAPVREGAKLFDANDNEIGIVTSGTAG 328 >gi|145225710|ref|YP_001136388.1| aminomethyltransferase [Mycobacterium gilvum PYR-GCK] gi|145218196|gb|ABP47600.1| Aminomethyltransferase [Mycobacterium gilvum PYR-GCK] Length = 757 Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 92/293 (31%), Gaps = 57/293 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A LQA +T D+ L SA+ + G ++ + ++ ++ F Sbjct: 426 LSALRKFEVLGPDAEALLQATLTRDIRRLSRGQVVYSAMCSESGGVVDDCTVLRLGDNNF 485 Query: 66 IL---EIDRSK-RDSLIDKLLFYKLRSN----------VII--EIQPINGVVLSWNQEHT 109 + + ++L +++ V ++G++ + + Sbjct: 486 RFIGGDPHGGVWLRTQAERLGLHQVWIKDSTDQMHNLAVQGPASRAVLDGLIWTPPGQPA 545 Query: 110 F----------------SNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139 + + R L + W H + Sbjct: 546 LRDLGWFRFLTGRLDGPDGAPLLVSRTGYTGELGYEVWVHPGDAETLWDRLWDAGRPHGL 605 Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 ++ +RI G+ +F T P +A + + ++G+ + ++ Sbjct: 606 TPLGLEALEMVRIEAGLAAGGHEFDDQTD-PFEAGIGFTVPLKTKTDDFVGR--AALVER 662 Query: 197 RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244 + ++ + + ++ G + ++G + ++A+ RI Sbjct: 663 KAHPQRTLVGLRLDSNETTAHGDCVHLGRTQVGVVTSATRSPLLGASIALCRI 715 >gi|295395101|ref|ZP_06805310.1| glycine cleavage system T protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972049|gb|EFG47915.1| glycine cleavage system T protein [Brevibacterium mcbrellneri ATCC 49030] Length = 378 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 102/321 (31%), Gaps = 79/321 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------KIARGSAILTPQGKILLYFLISK 59 LS+ ++V G A +L D L A+ ++ G ++ + + Sbjct: 49 LSHMGEVRVKGAQAGDYL------DYAMLSKYSTMKVGKAKYGLLIDENGHLIDDLITYR 102 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLR----------SNVIIEIQPINGVVLSWNQEHT 109 + +D +++ + S + ++ R ++V + + + +++ + Sbjct: 103 LADDEYLIVPNASNTPADVEAFTK---RVEAFLAANPGADVTVTDESADTALIAVQGPAS 159 Query: 110 -------------------FSNSSFIDERFSIADVLLHRT-------------------- 130 + ++ + D+LL RT Sbjct: 160 EDILLSTQDTEEGRNAIKELAYYAWAPLKVGGLDILLARTGYTGEDGFELYLPNAGAQEL 219 Query: 131 WGHNEKIASD-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTK 182 W K +D + LR+ G+ + + I P +A M + G K Sbjct: 220 WNVLTKAGADFDLKPAGLAARDSLRLEAGMPLFGNELT-NDITPVEAGMGGMVAGALKNK 278 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GK 236 ++G+E + ++ + R + + SG+ + + +G + Sbjct: 279 TEFVGREALEKLDTSKVDRTLVGLSSSGRRAARSGAELKAGEQTVGVITSGQPSPTLGHP 338 Query: 237 KALAIARIDKVDHAIKKGMAL 257 ALA +D+ + + + Sbjct: 339 IALAYVDVDQAEAGTELEADI 359 >gi|255008020|ref|ZP_05280146.1| glycine cleavage system aminomethyltransferase T [Bacteroides fragilis 3_1_12] gi|313145736|ref|ZP_07807929.1| aminomethyltransferase [Bacteroides fragilis 3_1_12] gi|313134503|gb|EFR51863.1| aminomethyltransferase [Bacteroides fragilis 3_1_12] Length = 361 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S Sbjct: 56 VKGPHALAFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|121587119|ref|ZP_01676895.1| glycine cleavage system T protein [Vibrio cholerae 2740-80] gi|121728088|ref|ZP_01681125.1| glycine cleavage system T protein [Vibrio cholerae V52] gi|147671841|ref|YP_001215785.1| glycine cleavage system T protein [Vibrio cholerae O395] gi|153819585|ref|ZP_01972252.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457] gi|227811903|ref|YP_002811913.1| glycine cleavage system T protein [Vibrio cholerae M66-2] gi|229506565|ref|ZP_04396074.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae BX 330286] gi|229510639|ref|ZP_04400119.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae B33] gi|229517230|ref|ZP_04406675.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae RC9] gi|229606044|ref|YP_002876748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae MJ-1236] gi|254850520|ref|ZP_05239870.1| glycine cleavage system T protein [Vibrio cholerae MO10] gi|255745920|ref|ZP_05419867.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholera CIRS 101] gi|262163522|ref|ZP_06031268.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae INDRE 91/1] gi|262168220|ref|ZP_06035918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae RC27] gi|298500126|ref|ZP_07009932.1| glycine cleavage system T protein [Vibrio cholerae MAK 757] gi|121548655|gb|EAX58705.1| glycine cleavage system T protein [Vibrio cholerae 2740-80] gi|121629636|gb|EAX62057.1| glycine cleavage system T protein [Vibrio cholerae V52] gi|126509867|gb|EAZ72461.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457] gi|146314224|gb|ABQ18764.1| glycine cleavage system T protein [Vibrio cholerae O395] gi|227011045|gb|ACP07256.1| glycine cleavage system T protein [Vibrio cholerae M66-2] gi|227014948|gb|ACP11157.1| glycine cleavage system T protein [Vibrio cholerae O395] gi|229345266|gb|EEO10239.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae RC9] gi|229353084|gb|EEO18024.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae B33] gi|229356916|gb|EEO21834.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae BX 330286] gi|229372530|gb|ACQ62952.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae MJ-1236] gi|254846225|gb|EET24639.1| glycine cleavage system T protein [Vibrio cholerae MO10] gi|255735674|gb|EET91072.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholera CIRS 101] gi|262023463|gb|EEY42166.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae RC27] gi|262028089|gb|EEY46748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio cholerae INDRE 91/1] gi|297542107|gb|EFH78158.1| glycine cleavage system T protein [Vibrio cholerae MAK 757] Length = 376 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR +I T G+ + +I Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 317 Query: 228 GTLGVVVGK 236 G + Sbjct: 318 GIVTSGTAG 326 >gi|319780439|ref|YP_004139915.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166327|gb|ADV09865.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 376 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 99/318 (31%), Gaps = 63/318 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + + G A + +I + + R S + G I+ + ++ + F Sbjct: 56 LSTMGKMDIKGPDAEALVNHVIVNNAAAMKPGQVRYSTVCREDGGIMDDLTVFRLGPEHF 115 Query: 66 ILEIDRSKRDSLIDKLLFYKL---------------------RS----NVIIEIQPINGV 100 +L R ++ LL + RS +I ++G+ Sbjct: 116 MLVTGSVNRLKMLPWLLHHAQGRKAYVTDITAAIAFPTIQGPRSRELLKAMISDADLDGL 175 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELR---------- 148 + +F++ R I+ + G + +D + L Sbjct: 176 -----KRWSFTSGHINGTRVLISRTGVTGELGFELFVPADEAASVWDALMRTGRDFGLKP 230 Query: 149 ----------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + D + P +D I KG ++G++ + +++ + Sbjct: 231 YGVLAMFTLGLEKAYPAHGIDM-DESRTPFHVGLDRW--IKFDKGDFVGRQALLKVRDKG 287 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH------AIK 252 + + +I D + + +L D + G + ++ ++ H AI Sbjct: 288 LDEQWVGLILDGDKPAATDARVLADGEDAGIVT--YSDHGYSLGKVLATAHLRLPFTAIG 345 Query: 253 KGMALTVHGVRVKASFPH 270 +++ + G +A Sbjct: 346 TELSIDIDGRPTRAVVAP 363 >gi|255554837|ref|XP_002518456.1| aminomethyltransferase, putative [Ricinus communis] gi|223542301|gb|EEF43843.1| aminomethyltransferase, putative [Ricinus communis] Length = 407 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK +PFL+ ++ ADV L + + +G + +I+K++ Sbjct: 79 SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAHGTGTLTVFTNEKGGAIDDSVITKVK 138 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 +D + ++ ++ L Sbjct: 139 DDLLYIVVNAGCRDKDLAHIEEHMKAFKTKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 198 Query: 83 FYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + + + S E F S + +A +L ++ G Sbjct: 199 KEDL-SKIYFGEFHMIDINGSHCFLTRTGYTGEDGFEISVASEHAVDLAKAILEKSEGKI 257 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G EV+ + Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRKSEGGFLGAEVILK 314 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 +R + T + P S S I D IG + Sbjct: 315 QLAEGPKIRR-VGFTSSGPPPRSHSEIQNDKGENIGEITS 353 >gi|257055902|ref|YP_003133734.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] gi|256585774|gb|ACU96907.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] Length = 819 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 50/267 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 I+V G A+ LQ + T + + +L G I ++++ E+ F Sbjct: 507 IEVSGPGALGLLQRLTTGRMDR-SVGSVTYTLMLDEAGGIRSDVTVARLGEELFQVGANG 565 Query: 67 -LEID-------------------------------RSKRDSLI------DKLLFYKLRS 88 L++D R L + L +++LR Sbjct: 566 NLDLDYLLRQARDEPGVQVRDITGGTCCIGVWGPLARDLVQPLSGDDFSNEALKYFRLRR 625 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + LS+ E + + + + DVL IA+ ++ LR Sbjct: 626 -AHIGGIPVIAMRLSYVGELGWEIYTSAEYGMRLWDVL-WEAGRPLGAIAAGRAAFNSLR 683 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G D P++A + ++ K Y+G E ++ +++ R+ + Sbjct: 684 LEKGYRSWGNDMTTEH-NPYEAGLGF--AVNKKKTGYVGYEAIAGLENETPARRLTCLTV 740 Query: 209 GTDDLPPSGS-PILTDDIEIGTLGVVV 234 GS P+ D +G + Sbjct: 741 DDGRSVVMGSEPVFLDGDAVGYVTSAA 767 >gi|147906134|ref|NP_001090416.1| aminomethyltransferase [Xenopus laevis] gi|114108200|gb|AAI23374.1| MGC154901 protein [Xenopus laevis] Length = 404 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 87/271 (32%), Gaps = 46/271 (16%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68 KV GK IPF+++++ AD+ L S +G I+ +++K + + Sbjct: 89 KVLGKDRIPFMESMVVADIAELKENQGTLSLFTNEKGGIIDDLIVTKTSDGYLYVVSNAG 148 Query: 69 IDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 +++KL +K +V +E + + + D+ Sbjct: 149 CSEKDSAHMLNKLQAFKAAGRDVDLEHIDCALLAVQGPLSARVLQAGLTDDLSKLTFMTS 208 Query: 119 ----RFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRIN 150 F I + R +++ + + LR+ Sbjct: 209 VYTTVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSLRLE 268 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P +A + G + G V+ Q + ++ + + +T Sbjct: 269 AGLCLYGNDI-DETTTPVEASLVWTLGKRRRTAMDFPGASVIV-PQIKGKVKHKRVGLTS 326 Query: 210 TDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239 T +PIL + IG + +L Sbjct: 327 TGPPVRQHAPILNLEGRVIGEVTSGCPSPSL 357 >gi|284929690|ref|YP_003422212.1| aminomethyltransferase [cyanobacterium UCYN-A] gi|284810134|gb|ADB95831.1| aminomethyltransferase [cyanobacterium UCYN-A] Length = 373 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 94/274 (34%), Gaps = 60/274 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----------------QGK 50 S+ + + G +P LQ+++ +D+ L A+ + L + Sbjct: 57 SHMGKLLIEGDDLVPLLQSLVPSDIKKLAPGKAQYTTFLNSAGGIIDDIIIYYQNSRKAL 116 Query: 51 IL-------------------LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91 I+ I+ + ++ +L + + KL + V Sbjct: 117 IITNSSTKDKDIKWIKLNAESTSIKITDLSQEKVLL---AIQGPQALKKLQLF-----VD 168 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFI-------DERFSIA-----DVLLHRTWGHNEK-IA 138 I+I ++ + S+FI ++ F + L + +EK + Sbjct: 169 IDITNLS--FFEHIETEILGCSAFISRTGYTGEDGFEVMVSNVIGKKLWKLLVDDEKVVP 226 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + LR+ + D +T P +A + L + +KG +IG+EV+ + + Sbjct: 227 CGLGARDTLRLEASMCLYGQDINDNTT-PLEAGLHKLVHLD-SKGDFIGREVLEKQTNEG 284 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + + ++ + G I + ++ T+ Sbjct: 285 VGKLLVVLEMEGKQIARRGYNIFSHGKQVSTITS 318 >gi|298384348|ref|ZP_06993908.1| glycine cleavage system T protein [Bacteroides sp. 1_1_14] gi|298262627|gb|EFI05491.1| glycine cleavage system T protein [Bacteroides sp. 1_1_14] Length = 361 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAAN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|29349992|ref|NP_813495.1| glycine cleavage system aminomethyltransferase T [Bacteroides thetaiotaomicron VPI-5482] gi|253572763|ref|ZP_04850163.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 1_1_6] gi|31340122|sp|Q89YZ6|GCST_BACTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|29341903|gb|AAO79689.1| putative aminomethyltransferase [Bacteroides thetaiotaomicron VPI-5482] gi|251837663|gb|EES65754.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp. 1_1_6] Length = 361 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ + Sbjct: 56 VKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAAN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|313225569|emb|CBY07043.1| unnamed protein product [Oikopleura dioica] Length = 375 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 95/294 (32%), Gaps = 53/294 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G+SAI ++++ TADV L + QG IL +++KI + + + S Sbjct: 63 RITGESAIAAIESVCTADVAALSDNSGSLALFTNQQGGILDDLIVNKISSEEIYVVSNAS 122 Query: 73 KRD---SLID--------KLLFYKLRSNVIIEIQPINGV---------------VLSWNQ 106 + +++ KL + +I +Q + Sbjct: 123 MAEQDFAILKNAAEIFDCKLEKIET---ALIAVQGPKAAELLQKGTSLDLSKLSFMQGAD 179 Query: 107 EHTFSNSSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 F S R + A + + + + + + LR+ G+ Sbjct: 180 LTLFGTSGIRATRCGYTGEDGFELSIPAEAVETITKQLIEDGALMAGLGARDTLRLEAGL 239 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITGTDD 212 D +T+ P L+ + +G + G E+V + + + ++ +I Sbjct: 240 CLYGNDIDETTLPPSAVLLFTVPKSRRAQGNFPGCAEIVKQQKTKPEEKRVGLIFQKGKP 299 Query: 213 LPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260 G+ + D +IG + + ++ K G L V Sbjct: 300 PARQGAELFNDGEKIGRVTSGGPSPTLGRNIGMGYVPLE----LTKPGTKLQVK 349 >gi|238921211|ref|YP_002934726.1| glycine cleavage system T protein, [Edwardsiella ictaluri 93-146] gi|259647492|sp|C5BAT2|GCST_EDWI9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|238870780|gb|ACR70491.1| glycine cleavage system T protein, putative [Edwardsiella ictaluri 93-146] Length = 374 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A SA+L G ++ ++ + + F Sbjct: 50 SHMTIVDLHGVRVRDFLRHLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFMADHHF 109 Query: 66 ILEIDRSKRDSLIDKL 81 L ++ + R+ + + Sbjct: 110 RLVVNSATRERDLAWI 125 >gi|22298287|ref|NP_681534.1| putative aminomethyltransferase [Thermosynechococcus elongatus BP-1] gi|31340141|sp|Q8DKV6|GCST_THEEB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|22294466|dbj|BAC08296.1| tll0745 [Thermosynechococcus elongatus BP-1] Length = 366 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/263 (12%), Positives = 84/263 (31%), Gaps = 42/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G+ + LQ ++ ++ L A+ + +L G I+ ++ + + Sbjct: 54 SHMGKLVLRGEGVLGALQTLVPTNLSQLQPGQAKYTVLLNEAGGIVDDVILY-MGDGQVR 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------- 119 ++ + Y L +++ + + + V+++ + S + +R Sbjct: 113 CIVNAATTAKDWAWFQKY-LPASIEVIDESASQVLIALQGPAATATLSPLCDRPLGEIKT 171 Query: 120 ------------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + L +T + LR+ Sbjct: 172 YRHAPVNLLGQPAWIARTGYTGEDGWEILVPAELGQQLWQTLLAAGVTPCGLGARDTLRL 231 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 ++ D T P +A +D L I K ++G+ + + + I R+ + Sbjct: 232 EAAMLLYGQDMDEQTT-PLEAGLDGL--IDWQKPDFVGRAALLAQKQQGIERQLVGLELL 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232 + G PI +G + Sbjct: 289 GKGIARHGYPIYAGAQAVGEVTS 311 >gi|283780905|ref|YP_003371660.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068] gi|283439358|gb|ADB17800.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068] Length = 815 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 60/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + +++ G A+ L + A++ T + +L +G ++ + + DTF Sbjct: 487 SSLTRLRISGPDALALLNRLCAANIDT-EAGRIVYTPMLNQRGGCESDVIVVRDDADTFY 545 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------------WNQ 106 L ++ +D + + R++ +EI+ I+ + Sbjct: 546 LVTSSTQAIRDVDWIERNR-RNDEQVEIEDISAATAVIGVMGPRSRELLALLSDADLQST 604 Query: 107 EHTFSNSSFID----------------------ERFSIADVLLHRTWGHNEKIASDIKTY 144 ++ S ID R A L + + + Y Sbjct: 605 HFPYNTSRTIDVGLARVRAMRMTYVGELGYELHLRADQAPQLYDELLSAGQSLGARPAGY 664 Query: 145 HE---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200 + LR+ +D P +A + I K ++G+E + + + + Sbjct: 665 YAMNSLRLEKAYRAWGSDLSVDDT-PLEAGLGFT--IDWNKPAGFLGKEALLQQRSTG-L 720 Query: 201 RKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIAR 243 RKR + I D G I + IG AL + Sbjct: 721 RKRLVQIVLHDSRAQLWGGERIFRGESCIGYTSSAAYGHTFGASVALGYLK 771 >gi|302539695|ref|ZP_07292037.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces hygroscopicus ATCC 53653] gi|302457313|gb|EFL20406.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces himastatinicus ATCC 53653] Length = 808 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 91/283 (32%), Gaps = 59/283 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 ++V G+ A FLQ + T +V + L G I ++++ D F Sbjct: 496 LEVTGRGAARFLQHLTTGNVDK-SVGSVTYTLTLDHDGGIRSDVTVARLGRDHFQVGANG 554 Query: 67 -LEID-------------------------------RSKRDSLIDK------LLFYKLRS 88 L++D R L D+ L F+ R+ Sbjct: 555 NLDLDWFARHLPEDGSVQVRDITAGTCCVGLWGPKAREVLQPLADQDFSHQCLKFF--RA 612 Query: 89 N-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 I P+ + LS+ E + + D + D L + IA+ ++ L Sbjct: 613 KRAHIGAVPVTAMRLSYVGELGWELYTTADMGAKLWD-TLWDAGREHGIIAAGRGAFNSL 671 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G D P++A + + K +IG+ + R + +R + Sbjct: 672 RLEKGYRSFGHDMTYEHD-PYEAGVGF--AVKRDKDDFIGKAALER--RAESVTRRLTCL 726 Query: 208 TGTDDLPP--SGSPILTDDIEIGTLGVVV----GKKALAIARI 244 T D P+ D +G + K +A A + Sbjct: 727 TIDDPASVVMGKEPVYDGDRPVGYVTSAAFGYTVGKGIAYAWL 769 >gi|271965323|ref|YP_003339519.1| sarcosine oxidase subunit alpha [Streptosporangium roseum DSM 43021] gi|270508498|gb|ACZ86776.1| sarcosine oxidase alpha subunit [Streptosporangium roseum DSM 43021] Length = 937 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 102/324 (31%), Gaps = 67/324 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T + TLP R + P G + ++++ ED F+ Sbjct: 606 STLGKIDLQGPDAAELLDRLYTTMMGTLPVGAIRYGVMCRPDGTVFDDGTVARLAEDRFL 665 Query: 67 LEIDRSKRDSLIDK-----------LLFY-----KLRSNVIIEIQPINGVVLSWN----- 105 +++D L Y + + V + V+ Sbjct: 666 ATTTTGNAAAVLDWMEEWLQTEWPSLRVYCTSVTEQWATVALAGPGSRAVLARLAPGLAV 725 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE-KIASDIKTY-------------------- 144 +F ++ D R + + + R E ++ + Sbjct: 726 DRESFPFMTWRDARVAGIEARVCRISFSGELAYEINVSAWDGLALWEAVQGSGAVTPYGT 785 Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 H LR G D T+ P D +D +S K Y+G+ +R R Sbjct: 786 ETMHVLRAEKGYPIVGQD-TDGTVTPADLGLDW--AVSRKKADYVGKRSHARPGDLRPDR 842 Query: 202 KRPMIITGTDD--LPPSGSPILTDDI----EIGTLGVV-VGKKALAIARI---------- 244 K + + D L P G+ ++ + TLG V G ++ A+ R Sbjct: 843 KHLVGLLPDDPDRLLPEGAHLVATARLPEPPVPTLGHVTSGYRSAALGRTFALALVSGGR 902 Query: 245 DKVDHAIKKGMALTVHGVRVKASF 268 ++V + + + V V + Sbjct: 903 ERVGERLY--VPVGADQVPVTVTR 924 >gi|120404545|ref|YP_954374.1| glycine cleavage system aminomethyltransferase T [Mycobacterium vanbaalenii PYR-1] gi|119957363|gb|ABM14368.1| aminomethyltransferase [Mycobacterium vanbaalenii PYR-1] Length = 369 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 90/310 (29%), Gaps = 50/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ + T D+ + A+ + T G ++ + + +D Sbjct: 57 SHLGKALVKGPGAAEFVNSAFTNDLRRIGPGQAQYTLCCTEDGGVIDDLIAYYVSDDEIF 116 Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115 L + + +++ L RS ++ +Q VV + Sbjct: 117 LVPNAANTAAVVAALQQRAPGGLTITDEHRSRAVLAVQGPVSADVVGGLGLPTDMDYMGY 176 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------------------LR 148 D F +V + RT E + + + LR Sbjct: 177 ADAEFRGVEVRVCRTGYTGEHGYELLPPWDQAAVVFDALVEAVQSAGGEPAGLGARDTLR 236 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + I P A I K + G++ + + R+ + Sbjct: 237 TEMGYPLHGHELSLD-ISPLQARCGW--AIGWKKDAFWGRDALLAEKAAG-PRRTLRGLR 292 Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID-KVDHAIKKGMALTVHG- 261 + +L + +G K +A+A ID + D + + V G Sbjct: 293 AVGRGVLRQDLTVLDGENRVGVTTSGTFSPTLKVGIALALIDTEADITDGAHVDVDVRGR 352 Query: 262 -VRVKASFPH 270 + + P Sbjct: 353 RIECEVVKPP 362 >gi|298208797|ref|YP_003716976.1| aminomethyltransferase [Croceibacter atlanticus HTCC2559] gi|83848724|gb|EAP86593.1| aminomethyltransferase [Croceibacter atlanticus HTCC2559] Length = 360 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 35/78 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + T D L A+ S + +G I+ +I + + ++ Sbjct: 49 SHMGEFLISGPNALELIQKVSTNDASKLSDGKAQYSCLTNTEGGIVDDLIIYCLNPEKYL 108 Query: 67 LEIDRSKRDSLIDKLLFY 84 L ++ S + D + + Sbjct: 109 LVVNASNIEKDWDWISMH 126 >gi|332285408|ref|YP_004417319.1| glycine cleavage system aminomethyltransferase T [Pusillimonas sp. T7-7] gi|330429361|gb|AEC20695.1| glycine cleavage system aminomethyltransferase T [Pusillimonas sp. T7-7] Length = 364 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 I + G A FL+ ++ DV L A S +L G +L ++ D + L ++ Sbjct: 58 IDINGAGAEDFLKRLLANDVTKLSIPGKALYSCMLNLDGGVLDDLIVYFFSSDQWRLIVN 117 Query: 71 RSKRDSLIDKLL 82 + + + Sbjct: 118 AGTAEKDLAWIQ 129 >gi|326388776|ref|ZP_08210364.1| glycine cleavage T protein (aminomethyl transferase) [Novosphingobium nitrogenifigens DSM 19370] gi|326206750|gb|EGD57579.1| glycine cleavage T protein (aminomethyl transferase) [Novosphingobium nitrogenifigens DSM 19370] Length = 730 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 100/311 (32%), Gaps = 68/311 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A +Q +T D+ L +A+ G ++ + ++ F Sbjct: 404 LSALRKFEVIGPDAEALMQLAVTRDITKLAVGQVVYTAMCHETGGMIDDGTVFRLGPTNF 463 Query: 66 ILEIDRS----KRDSLIDK--LLFYK---------------LRSNVI--IEIQPINGVVL 102 L +K L + L ++ + P + + Sbjct: 464 RWVCGEDWCGVWLRELAEKNGLKVWVKSSTDQLHNLALQGPLARKILAPLVTTPAHRATV 523 Query: 103 SWNQEHTFSNSSFID-----ERFSIADVLLHRTWGHNEKIASDIKTYHEL---------- 147 + F+ D R L + W H ++ A+ + L Sbjct: 524 EELKWFRFTTGKLGDIPVMISRTGYTGELGYEIWCHPDQGAA---LWDALMAAGEPYGLM 580 Query: 148 ----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRI 194 RI G+V +F T P +A + G ++ K Y+G E ++ Sbjct: 581 PFGLDGLDMVRIEAGLVFAGYEFCDQTD-PFEAGI----GFAVPKAKTAPYVGSEALA-- 633 Query: 195 QHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249 R ++ + + + G P+ +++G + K +A+AR+D Sbjct: 634 LRREHPQRVLVGLDVAGAEAVGHGDPVFDGRLQVGVVTSATRSPVLGKTIALARVDVRKS 693 Query: 250 AIKKGMALTVH 260 A+ G AL + Sbjct: 694 AL--GQALEIG 702 >gi|254460065|ref|ZP_05073481.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2083] gi|206676654|gb|EDZ41141.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium HTCC2083] Length = 813 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 93/319 (29%), Gaps = 64/319 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A F+ V ++ + L +G I ++++ Sbjct: 488 MSSFGKIRVEGRDAEAFM-----NYVGGGDYSVANGKIVYTQFLNRRGGIEADVTVTRLT 542 Query: 62 EDTFILEIDRSKRDSLIDKLLF----YKL-----------------RSNVIIEIQPINGV 100 E ++++ + R + L +++ RS ++E N Sbjct: 543 EQSYLVVTPAATRLADETWLRRNQGDFEVVITDVTSGEGVLAIMGPRSRELLEAVSPNDF 602 Query: 101 VLSWNQEHTFSN-----SSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------- 144 + N T R + L + + + Sbjct: 603 TNASNPFGTAQEIEIGMGLARAHRVTYVGELGWEIYVSADMAGHVFERLAEPGLEMGMRL 662 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 RI G D +A + + K YIG+E + Q Sbjct: 663 CGMHMMDTCRIEKGFRHFGHDITSEDHV-MEAGLGF--AVKKDKANYIGREAILAKQENG 719 Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI----DKVDH 249 + + ++ + L P+L D + L A+ + I +K+ Sbjct: 720 LDMRLLQFKLSDPEPLLYHAEPVLRDGEIVSYLTSGAYGHHEGAAMGMGYIPCKGEKLAD 779 Query: 250 AIKKGMALTVHGVRVKASF 268 + + V G RVKA Sbjct: 780 VLGSTFEIDVAGTRVKAEV 798 >gi|167044745|gb|ABZ09414.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_APKG8C21] Length = 823 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 81/273 (29%), Gaps = 50/273 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A LQ I DV +P +++L +G I +++ ED +++ + Sbjct: 504 LQGRDAEGVLQRICANDVA-VPTGGVVYTSMLNQRGGIECDLTVTRTAEDRYLIVTSGAT 562 Query: 74 RDSLIDKLL----------------FYKL------RSNVIIE-----IQPINGVVLSWNQ 106 + + Y + RS ++ + ++ Sbjct: 563 ERRDFEWIKSNIPNEAHAFLTNVTSAYAVLGVMGPRSRELLSQLTDVDLSSDAFPFLSSR 622 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRI 149 E ++ R + L + E + + LR Sbjct: 623 EIGLGYATGRATRITYVGELGWELYIPTEFATAVYDAIIDRGAGLGLRHAGVHAMESLRS 682 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 D P +A + + + +IG++ + R + + R R +I T Sbjct: 683 EKAYRAWGHDLTDQDT-PLEAGLGFAVALD-KETPFIGRDALLRQREAGLNR-RLVIFTL 739 Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVVGKKALA 240 D P PI D + +G + L Sbjct: 740 DDPEPLLLGDEPIYRDGVLVGRITSGAFGHTLG 772 >gi|294509140|ref|YP_003566068.1| aminomethyl transferase [Bacillus megaterium QM B1551] gi|294352064|gb|ADE72388.1| aminomethyl transferase [Bacillus megaterium QM B1551] Length = 360 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 +F+KV G SA FLQ +IT D+ L + +L G ++ ++ +E + ++LEI Sbjct: 51 TFLKVSGDSASSFLQELITKDLDYLTEEQTVTCLMLDEDGHLVTELIVYVMENE-YLLEI 109 Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE 93 + S + D L + ++ V+IE Sbjct: 110 EPSLSEKAEDYLQSH-IKDGVLIE 132 >gi|91065111|gb|ABE03943.1| sarcosine dehydrogenase [Theonella swinhoei bacterial symbiont clone pSW1H8] Length = 823 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 83/273 (30%), Gaps = 51/273 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + I+V G A L+ + + P +++LTP+G I I ++++D + Sbjct: 502 STLAVIEVGGPGATGLLERVAANRIER-PIGKIVYTSLLTPKGGIAGDLTIMRLDQDRYW 560 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--VIIEIQ-----------PINGVVLSWNQEHTFSNS 113 + + + L + + V I P VL H SN Sbjct: 561 VVTGGALLTRDMAWLRRHA-PDDGSVTITDHSSRYMPIGLWGPNARRVLQKATGHDVSNE 619 Query: 114 SF---------------IDERFSIADVLLHRTWGHNE-----------------KIASDI 141 +F + R S L + E IA+ Sbjct: 620 AFPYYTARSIEIGCAPVVALRISYVGELGWELYPPAEYALSVWDDLWAAGREFGMIAAGA 679 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + LR+ G D P +A + L + ++G+ + + + + R Sbjct: 680 GAFDSLRLEKGYRLWGQDI-HQDYNPFEAGTGW--AVRLDRSEFVGRAALLKAKAGGLAR 736 Query: 202 -KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 R + + PI D IG + Sbjct: 737 LLRCLTFDTATGMALGKEPIFDGDHCIGYVTSA 769 >gi|146277911|ref|YP_001168070.1| sarcosine oxidase alpha subunit family protein [Rhodobacter sphaeroides ATCC 17025] gi|145556152|gb|ABP70765.1| sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides ATCC 17025] Length = 993 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 80/282 (28%), Gaps = 60/282 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP R + G ++ ++++I ED+++ Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVARISEDSWL 719 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95 D + + + + V I ++ Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVHTANLTEQFAQVAIVGPNARRLLEKLGGMDVS 779 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLL-----------------HRTWGHNEKIA 138 + W E T + R S + L H + Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACHEAGAEFGAMP 838 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K +IG+ + R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLNLGW--AISKKKADFIGKRGMERAFLAS 895 Query: 199 IIRKRPMIITGTDD--------LPPSGSPILTDDIEIGTLGV 232 R + + + D P GS G + Sbjct: 896 PDRWKLVGLETLDGSVLPDGAIAPAPGSNANGQRNTQGRVTS 937 >gi|326559384|gb|EGE09809.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis 46P47B1] gi|326568515|gb|EGE18587.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis BC1] gi|326575570|gb|EGE25494.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis O35E] Length = 366 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 95/289 (32%), Gaps = 61/289 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118 + + + + R+ + V + + P + V L+ + + + Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLAVKP 165 Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141 + V L W + Sbjct: 166 EWTDKVNALKPFVGVDLGDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D + P +A M + +IG+ + +++ + Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKDENRDFIGKSALIALKNDGVKM 284 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARI 244 ++ ++ + +G ++T+D G G +++AIAR+ Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIARV 330 >gi|300742070|ref|ZP_07072091.1| glycine cleavage system T protein [Rothia dentocariosa M567] gi|300381255|gb|EFJ77817.1| glycine cleavage system T protein [Rothia dentocariosa M567] Length = 372 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 97/291 (33%), Gaps = 64/291 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++ G A FL A+++ + L A+ S + +G ++ + ++ ++ Sbjct: 50 LSHMGEFRITGPDAAAFLDYALVSN-MSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108 Query: 65 FILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID 117 F++ + + D ++ ++L + +V + + +++ E + D Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF----DVKFVNESDDTSLIAVQGPRAEEILLAAGASD 164 Query: 118 ER--------------FSIADVLLHRTWGHNE-------KIASDIKTYHE---------- 146 E + DVLL RT E A+ +K + Sbjct: 165 EDAVRELKYYASVPVTIAGVDVLLARTGYTGEDGFELFVPNANAVKLWEALAAAGEPFGL 224 Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 LR+ G+ + I P ++ + L I+L K + V R Sbjct: 225 TPAGLAARDSLRLEAGMPLYGHELGLD-ITPFESGLGRLVEIALEKKTV---DFVGRTAL 280 Query: 197 RNIIR----KRPMIITGTDDLPPSGSP--ILTDDIEIGTLGVVVGKKALAI 241 + + + + + P + + +IG + + L Sbjct: 281 TELAKSPSERILVGLKAQAKRPARAGSFLVDAEGNQIGEVTSGIPSPTLGY 331 >gi|255264879|ref|ZP_05344221.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62] gi|255107214|gb|EET49888.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62] Length = 1003 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 100/323 (30%), Gaps = 65/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL R + + G + ++++I+EDTF+ Sbjct: 670 STLGKIIVKGPDAGKFLDMMYTNMMSTLKVGRCRYGLMCSENGFLSDDGVVARIDEDTFL 729 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR--------SNVII---------------EIQ 95 D + + +K+ + V + ++ Sbjct: 730 CHTTTGGADRIHAHMEEWLQTEWWDWKVWTVNATEQYAQVAVVGPKARKVLQKLGGMDVS 789 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IA 138 ++W S+ + R S + L + + + Sbjct: 790 REALSFMAWADGEIGGFSARVY-RISFSGELSYEIAVKASEGRAFWDALLEAGEEFGVMP 848 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K ++G+ R + Sbjct: 849 YGTEALHIMRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKDDFLGKRAQQRSHMTD 905 Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVGK----KALAIARIDK 246 R + + + T + P G+ +T+ IG + + +A+ + Sbjct: 906 PDRWQLVGLETVDGSVLPDGAYAVTEGENANGQRNMIGRVTSTYHSPTLERGIAMGLVKH 965 Query: 247 VDHAIKKGMAL-TVHGVRVKASF 268 + + + + G V A Sbjct: 966 GPDRMGERLEFPKIDGTSVFAKI 988 >gi|150396403|ref|YP_001326870.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium medicae WSM419] gi|150027918|gb|ABR60035.1| glycine cleavage system T protein [Sinorhizobium medicae WSM419] Length = 379 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 87/302 (28%), Gaps = 55/302 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L+ ++ DVL+L R G IL +I D L ++ + +D+ Sbjct: 71 EDAALALEKLVPVDVLSLAEGRQRYGLFTNATGGILDDLMIVNRG-DHLFLVVNAACKDA 129 Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113 L L +I +Q P G VL W E + Sbjct: 130 DFAHLKNGLGSLCDVTM--LTDRALIALQGPRAGAVLCELWADVASMRFMDVAEADLHDV 187 Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 S I R R H + + + LR+ G+ D Sbjct: 188 SCIISRSGYTGEDGFEISIPTEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247 Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 ST P +A ++ G + G + + + R+R + Sbjct: 248 IDTSTS-PIEAGLEWAIQKSRRADGERAGGFPGADRILAEFTHGVSRRRVGLKPEGRAPV 306 Query: 215 PSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 G + D + GT+ V G A+ + + + + + V Sbjct: 307 RGGVRLFADAEGNTAAGTVTSGGFGPSVDGPIAMGYVDAEHAETGTRLFAEVRGKFLPVA 366 Query: 266 AS 267 S Sbjct: 367 VS 368 >gi|307326478|ref|ZP_07605673.1| glycine cleavage system T protein [Streptomyces violaceusniger Tu 4113] gi|306887886|gb|EFN18877.1| glycine cleavage system T protein [Streptomyces violaceusniger Tu 4113] Length = 375 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 64/314 (20%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G A L A++ + L AR + + +G IL ++ ++ ++ Sbjct: 55 LSHMGEISLIGSQAGEALDHALVGR-LSALAVGRARYTMVCDDEGGILDDLIVYRLGDEE 113 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120 F++ + S ++D L R+ + + + ++ E S D Sbjct: 114 FLVVANASNAQVVLDALTE---RAGGFEATVRDDRDAYALIAVQGPESPGILGSLTDADL 170 Query: 121 -------------SIADVLLHRTWGHNEK-----IASDIKT--YHE-------------- 146 + ++ RT E +A D + Sbjct: 171 EGLKYYAGLPGTVAGVPAMIARTGYTGEDGFELFLAPDDAERVWDALTEAGAPVGLVPCG 230 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQH 196 LR+ G+ + T P DA + + + K G ++G+ E SR Sbjct: 231 LSCRDTLRLEAGMPLYGNELTTDTT-PFDAGLGRV--VKFDKPGDFVGRQALEAASREAD 287 Query: 197 RNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KALAIARIDKVDH 249 R ++ +P +G + + D +IG + A+A + Sbjct: 288 TVSPRTLVGLVAEGRRVPRAGYAVVAADGSQIGQVTSGAPSPTLGRPIAMAYVDPEYAKP 347 Query: 250 AIKKGMALTVHGVR 263 +G+++ + G R Sbjct: 348 G-TEGVSVDIRGTR 360 >gi|319442015|ref|ZP_07991171.1| glycine cleavage system aminomethyltransferase T [Corynebacterium variabile DSM 44702] Length = 397 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A FL A+I+ + + A+ S I G I+ + + + Sbjct: 49 LSHMGEVRVTGPDAAAFLDHALISR-ISAVKVGKAKYSMICREDGGIIDDLITYVLAPEE 107 Query: 65 FILEIDRSKRDSLIDKLL 82 +++ + ++ L Sbjct: 108 YLVVPNAGNAPAVFAALT 125 >gi|307945169|ref|ZP_07660505.1| sarcosine oxidase subunit alpha [Roseibium sp. TrichSKD4] gi|307771042|gb|EFO30267.1| sarcosine oxidase subunit alpha [Roseibium sp. TrichSKD4] Length = 983 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 23/212 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I V G A FL + + LP AR +L G ++ ++ E Sbjct: 646 CDVSSLGKIAVQGPDAAEFLNRVYSNGFAKLPIGKARYGIMLRDDGFVMDDGTTWRLGET 705 Query: 64 TFIL---EIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSF-- 115 F++ + K +++LL + R V + +S + + Sbjct: 706 EFLMTTTTTNAGKVMVFMEELL--QTRWPDLKVHVSSVSDEWAAVSVAGPKARATIAACL 763 Query: 116 ------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 +E V + + I EL + + + ++P Sbjct: 764 AEGEYISNEALPFMGVRKITLANGIPGLIARISFSGELAYELYVPAGHGAAMMDLLWPEA 823 Query: 170 -------ALMDLLNGISLTKGCYIGQEVVSRI 194 ++ L + + KG G E+ R+ Sbjct: 824 ERQGGCLYGLEALGTLRIEKGHVTGAELDGRV 855 >gi|153824035|ref|ZP_01976702.1| glycine cleavage system T protein [Vibrio cholerae B33] gi|126518444|gb|EAZ75667.1| glycine cleavage system T protein [Vibrio cholerae B33] Length = 368 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 72 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 129 Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127 V +E+ ++ + + I R Sbjct: 130 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 189 Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173 + +K A+ + LR+ G+ D P+T +L+ Sbjct: 190 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 249 Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227 + + +G + G E++ S+I+ + + RKR +I T G+ + +I Sbjct: 250 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 309 Query: 228 GTLGVVVGK 236 G + Sbjct: 310 GIVTSGTAG 318 >gi|119504941|ref|ZP_01627018.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2080] gi|119459227|gb|EAW40325.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2080] Length = 366 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 100/290 (34%), Gaps = 57/290 (19%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85 ++ D+ LP S + T G +L +I++ +ED ++L ++ S+RD+ ++ L + Sbjct: 71 LLPTDIRALPIGRQCYSLLTTESGGVLDDLMIARRQED-YLLVVNASRRDADLEHLGRH- 128 Query: 86 LRSNVIIEIQPI-------------------------NGVVLSWNQEHTF-SNSSFIDER 119 ++ V I+ + + + V+ W + S S + E Sbjct: 129 IKDVVTIDDRALLALQGPCAEAVLMPLIPDVTHMRFMDVAVVYWQAHEIWISRSGYTGED 188 Query: 120 -------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 S A+ H + + + LR+ G+ + I P +A + Sbjct: 189 GFEISILVSAAEDFTHALLENEDVALCGLGARDSLRMEAGMPLYGHEL-KEDISPIEAGL 247 Query: 173 DLLNGISLTK-------GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT--- 222 I ++ G ++G + + R R+R + G + Sbjct: 248 SW--AIHRSRRATGKFPGEFLGADRILRELDHGAARRRIGLKPQGRAPMRDGVLLYDSPE 305 Query: 223 DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 IG + A+A+ + + A G V G R++A Sbjct: 306 GSEPIGVITSGGFSPSLRAPIAMALIKSEVDSRATVFGE---VRGRRLEA 352 >gi|323507968|emb|CBQ67839.1| probable GCV1-glycine decarboxylase, subunit T, mitochondrial [Sporisorium reilianum] Length = 453 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 101/299 (33%), Gaps = 61/299 (20%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+ FLQ + A + ++P + S +L+ QG IL +I+K +D+F + + R Sbjct: 139 GPGALKFLQHLTPASLTSMPAFSSTLSVLLSEQGGILDDLIITKHADDSFYVVTNAGCRT 198 Query: 76 SLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEH----------------TFSNSSF 115 + +L + V ++ G++ TF S+F Sbjct: 199 DDLAWFKK-QLDAWTGDAVEHKVMDDWGLLALQGPTAAKVLEKLAGDFDLNQLTFGKSAF 257 Query: 116 ID------------ERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELRI 149 + R L +E + + LR+ Sbjct: 258 VPLSVNGDKVECHVARAGYTGEDGFEISIPPASTVALAETLLADSEVQLAGLAARDSLRL 317 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 G+ D +T+ P + + + G ++G E V + R+R ++ Sbjct: 318 EAGMCLYGHDL-DATVSPIEGALAWVVGKDRRAAADFLGAERVLKELKEGPPRRRVGLLI 376 Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + G+ + T + E +G + + A+A+ + + KKG L V Sbjct: 377 -DGGIAREGANLFTPEGELVGRVTSGIPSPTLGKNIAMALVQ----NGQHKKGTKLKVE 430 >gi|326559763|gb|EGE10173.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis 7169] Length = 366 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 94/288 (32%), Gaps = 61/288 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118 + + + + R+ + V + + P + V L+ + + + Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLTVKP 165 Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141 + V L W + Sbjct: 166 EWTDKVNALKPFVGVDLSDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ D + P +A M + ++G+ + +++ + Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKNENRDFVGKSALIALKNDGVKM 284 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIAR 243 ++ ++ + +G ++T+D G G +++AIAR Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIAR 329 >gi|170596929|ref|XP_001902948.1| pyruvate dehydrogenase phosphatase regulatory subunit precursor [Brugia malayi] gi|158589053|gb|EDP28205.1| pyruvate dehydrogenase phosphatase regulatory subunit precursor, putative [Brugia malayi] Length = 844 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 56/287 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS+ + + G + + FLQ + + +V +P + + QG + I ++EED Sbjct: 497 IDLSSFAKFNIEGPNVVEFLQYLCSGNVN-VPVGSIVYTGMQNEQGGFVSDCAICRLEED 555 Query: 64 TFILEIDRSKRDSLIDKLLFY--KLRSNVII-EIQPINGVVLSWNQEH------------ 108 F + ++ L + KL + + ++ V+ Sbjct: 556 QFFAIVPPVQQLRFCLWLKKWVKKLGHKIYVGDVTGHYTVLDVVGPSSRALMEKLTGESM 615 Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHN------------------EKIASDIKTY--- 144 F + S + +A + + H E++ K Y Sbjct: 616 SRCDFPSFSIREIAIGMATGIRALSLTHTGELEWEMYIPNEVVQNVYERLMERGKEYGVM 675 Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +LRI V D + P + + K +IG++ + + Sbjct: 676 HAGYYALRQLRIEKFFVCWGQDISTD-VTPLECG--RTYRVDFHKN-FIGKDALLEQKRN 731 Query: 198 NIIRKRPMIITGTDDL-----PPSGSPILTDDIEIGTLGVVVGKKAL 239 I ++ ++ G DL P G I +G L Sbjct: 732 GIRKRFVQLLVGNHDLDHDPWPQGGELIYRYGEPVGRTTSAAYGYTL 778 >gi|251791007|ref|YP_003005728.1| glycine cleavage system aminomethyltransferase T [Dickeya zeae Ech1591] gi|247539628|gb|ACT08249.1| glycine cleavage system T protein [Dickeya zeae Ech1591] Length = 366 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F Sbjct: 50 SHMTIVDLRGARVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH 108 L ++ + R+ + + + + V I + ++ + Sbjct: 110 RLVVNSATREKDLAWITEH---AKPFMVAITEREDLSLIAVQGPQA 152 >gi|3915699|sp|P49364|GCST_PEA RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|438217|emb|CAA81080.1| T-protein [Pisum sativum] gi|3021553|emb|CAA10976.1| T protein [Pisum sativum] Length = 408 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK + FL+ ++ ADV L + + +G + +I+K+ Sbjct: 80 SLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVT 139 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 +D L ++ ++ L Sbjct: 140 DDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199 Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + + ING + E F S + +A LL ++ G Sbjct: 200 KEDL-SKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKI 258 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G +V+ + Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDLE-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 315 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232 +R I+ + P S S I IG + Sbjct: 316 QLADGPSIRRVGFIS-SGPPPRSHSEIQDEGGNNIGEVTS 354 >gi|186477749|ref|YP_001859219.1| glycine cleavage system aminomethyltransferase T [Burkholderia phymatum STM815] gi|238691314|sp|B2JJ71|GCST_BURP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|184194208|gb|ACC72173.1| glycine cleavage system T protein [Burkholderia phymatum STM815] Length = 372 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + I + G L+ ++ + A Sbjct: 112 RVVVNAGTAEKDIAWFNK----------LNDEEGFGLTITPRRDYAIVAVQGPN---ARE 158 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + T H + +K ++ R+ Sbjct: 159 KVWATVPHARAASEALKPFNAARVA 183 >gi|323697862|ref|ZP_08109774.1| glycine cleavage system T protein [Desulfovibrio sp. ND132] gi|323457794|gb|EGB13659.1| glycine cleavage system T protein [Desulfovibrio desulfuricans ND132] Length = 361 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 91/302 (30%), Gaps = 55/302 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ GK A L I++ D+ TL R +L G I ++ + ED ++L ++ + Sbjct: 58 KLSGKGAKDALNTIVSHDLNTLAPGKCRYGFLLNASGGINDDLIVYCLAEDEYMLVVNGA 117 Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH----------------------- 108 R D + L S ++ +I G + E Sbjct: 118 CRQKDFDHIAA-NLPSGLVFTDISDETGKIDVQGPESLEVVNALLGCKWNHLKYFNFEQT 176 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHN-------EKIASD-------IKTYHELRINHGIV 154 I R L + + + EK+ +D + LR+ G Sbjct: 177 DVLGFPMIVSRTGYTGELGYELYLPSDKALDVWEKLMADERVEPVGLGARDTLRLEIGYP 236 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P +A +G L K YIG+ + R+ I P+ I G Sbjct: 237 LYGQDLDEQRT-PVEAG----SGFFLKKESEYIGKSGLGRVDECLI----PLTIDGRRTA 287 Query: 214 PPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + L + G + ALA R D+ K S Sbjct: 288 RHNDEVCLPGGEKTGVVTSGSFAPSLGHCVALAYVRAKDADNETFIIKTARAELEAKKTS 347 Query: 268 FP 269 P Sbjct: 348 LP 349 >gi|254503741|ref|ZP_05115892.1| sarcosine oxidase, alpha subunit family [Labrenzia alexandrii DFL-11] gi|222439812|gb|EEE46491.1| sarcosine oxidase, alpha subunit family [Labrenzia alexandrii DFL-11] Length = 1000 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 94/325 (28%), Gaps = 65/325 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL+ I T L R +L G I+ +I ++ +D F Sbjct: 667 STLGKIEVVGPDAAEFLERIYTNPWKKLAPGRCRYGLLLNDAGFIVDDGVIGRLADDRFH 726 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----PINGVVLSWNQEHTFSNSSFIDERFS 121 + S+ + Y +++ V + + FI+ Sbjct: 727 VTTTTGGAPSVFATMEDYLQTEWPDLDVWITSTTEQYAVAAVQGPKAREVIAPFIEGIDL 786 Query: 122 IADVLLH----------------------------------------RTWGHNEK---IA 138 AD H G EK A Sbjct: 787 SADAFPHMSVKEGTFCGVPCRLFRISFTGELGFEINVPRRHGKMMWETLAGEIEKHNGTA 846 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P DA M I K ++G+ + R Sbjct: 847 YGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSW--AIGKKKHDFVGKRGLERPDLVA 903 Query: 199 IIRKRPMIITGTDDLP--PSGSPILTDDIEI------GTLGVVV------GKKALAIARI 244 RK+ + + D G+ I + G + ALAI + Sbjct: 904 ENRKQFVGLLTKDPKVKLEEGAQITVEQNPATGTPAEGHVTSSYYSPAMGRTIALAIVKN 963 Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269 H + + G+ V+ + P Sbjct: 964 GHALHGKSLYVPMPDGGIEVEVTSP 988 >gi|16127585|ref|NP_422149.1| glycine cleavage system T protein [Caulobacter crescentus CB15] gi|221236401|ref|YP_002518838.1| aminomethyltransferase [Caulobacter crescentus NA1000] gi|13425059|gb|AAK25317.1| glycine cleavage system T protein [Caulobacter crescentus CB15] gi|220965574|gb|ACL96930.1| aminomethyltransferase [Caulobacter crescentus NA1000] Length = 375 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 91/264 (34%), Gaps = 40/264 (15%) Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ ++ G++ A F + +++AD L R +L G I+ + ++ +ED Sbjct: 60 SHMGQARIRGENPAKSF-EKVVSADYQGLKAGKQRYGVLLNADGGIVDDLMTARPDEDGL 118 Query: 66 ILEIDRSKRD--------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + ++ + +D L + +L ++ +Q + + F+D Sbjct: 119 FVVVNGACKDNDYAIIARELAGEATVTRLEDRALLALQGPEAAAVLAAHVPEAAQMVFMD 178 Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150 + + A + T +E++ + LR+ Sbjct: 179 AKALSAFGVDAIISRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSLRLE 238 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P +A ++ G S + G Y+G +++ + R R + Sbjct: 239 AGLPLYGHDL-DETVSPIEAGLNFAVGRSRREAGDYLGAARIAKELAGELSRVRVNLKVL 297 Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232 G+ I + IG + Sbjct: 298 EGAPAREGAEIADEAGNVIGKVTS 321 >gi|99080275|ref|YP_612429.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040] gi|99036555|gb|ABF63167.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040] Length = 819 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 60/310 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69 V G+ A L I D+ +P +A G +++++ D F++ + Sbjct: 498 VQGRDACTLLNRISCNDID-VPIGKVVYTAWTNQAGGFEADLTVTRMDVDRFMVVVGENS 556 Query: 70 ---------DRSKRDSL---------IDKLLFY--KLR---SNVIIEIQPINGVVLSWNQ 106 D I ++ + K R + V Q Sbjct: 557 HGHTETWMRRHIGADEFVTITDMTDGITQINLHGPKARDILAKVSAADLSQEAFPFMTAQ 616 Query: 107 EHTFSNSSFIDERFSIADVLLH-----------------RTWGHNEKIASDIKTYHELRI 149 R + L + + + ++T LR+ Sbjct: 617 HIDVGLFRIHALRVTYVGELGWELHVPSLHAVQVYDLLMQAGADHGLRNAGMQTLSSLRL 676 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP--MI 206 D D +T P +A + + L K G +IG++ +++I+ ++R + Sbjct: 677 EKAYRDFGVDL-DNTDTPIEAGLGF--AVKLDKPGGFIGRDALAKIKAAGAPKRRMLQFL 733 Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARID---KVDHAIKKGMAL 257 + + L I DD +G + + G + A I+ + A ++ Sbjct: 734 LRDPEPLLHGNEIIYLDDKPVGYIQVGAYGHTLQGAVGIGFAEIETPLTSEIATSGAWSI 793 Query: 258 TVHGVRVKAS 267 + G ++ A+ Sbjct: 794 DIAGTKIAAT 803 >gi|300770688|ref|ZP_07080567.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300763164|gb|EFK59981.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 360 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 92/305 (30%), Gaps = 52/305 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G + + LQ + + DV L + + + G ++ FL +I+E T+ L ++ S Sbjct: 57 LKGDNVLDLLQKVSSNDVSKLYDGKVQYAYLPNENGGVVDDFLTYRIDEKTYFLVVNASN 116 Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + + + Y L + +Q + + L+ + +TF+ +F Sbjct: 117 IEKDWNWISKYNTYGVEMKNISDQTSLFAVQGPKAAEALQSLTDIELAPMEYYTFAKGTF 176 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152 + + G E ++ + LR+ G Sbjct: 177 AGVDNVLVSATGYTGAGGFEIYVANEDAQKVWDAIFEAGAAYGIKPIGLGARDTLRLEMG 236 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D +T P A + + TK ++ + + + +K Sbjct: 237 FCLYGNDIDDNTS-PLAAGLGWV--TKFTKD-FVNSANLKAEKEAGVKQKLVGFEMIDRG 292 Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P I+ D IG + L + + + ++ K Sbjct: 293 IPRHDYEIVDADGNVIGRVTSGTQSPSLKKSIGLGYVDQAFAKEGTEIFIHIRNQKIKAK 352 Query: 266 ASFPH 270 + P Sbjct: 353 VAKPP 357 >gi|257055375|ref|YP_003133207.1| glycine cleavage system aminomethyltransferase T [Saccharomonospora viridis DSM 43017] gi|256585247|gb|ACU96380.1| aminomethyltransferase [Saccharomonospora viridis DSM 43017] Length = 370 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 101/320 (31%), Gaps = 68/320 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAI---ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 LS+ I+V G A QA+ + ++ L AR + + G +L ++ ++ E Sbjct: 53 LSHMGEIEVTGAEAA---QALDYALVGNLSALKVGRARYTLLCAADGGVLDDLVVYRLSE 109 Query: 63 DTFILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +++ + ++L ++ + + V ++ P ++ Sbjct: 110 RRYLVVANAGNTAVVVEALRERAATFD--AEVT-DVSPQTALIAVQGPASAAIVEQVTGA 166 Query: 119 RFSI-------------ADVLLHRTWGHNE-------KIASDIKTY-------------- 144 A++LL RT E S + + Sbjct: 167 ELDSLRYFASMPATVDGAEILLARTGYTGEDGFELFLDADSAVSVWRRITEAGASHGLLP 226 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR 197 LR+ G+ + S + P A + + K G ++G+ S ++ + Sbjct: 227 AGLACRDTLRLEAGMPLYGNEL-SSELTPFHAGLGRT--VKFDKPGDFVGR---SALEDK 280 Query: 198 NIIRKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250 K + + G P S +L D +G + V A+A + + Sbjct: 281 REPEKVLVGLRGEGRRAPRHSYRVLDGDRVVGEITSGVLSPTLGYPIAMAYVTPEVAEPG 340 Query: 251 IKKGMALTVHGVRVK-ASFP 269 + + V+ S P Sbjct: 341 TALLVDIRGRSTPVEVVSLP 360 >gi|260430236|ref|ZP_05784210.1| glycine cleavage T-protein [Citreicella sp. SE45] gi|260418708|gb|EEX11964.1| glycine cleavage T-protein [Citreicella sp. SE45] Length = 788 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A L ++T +V TL SA+ P G ++ + ++ E F Sbjct: 458 LSALRKFEVTGPDAEALLNWVLTRNVETLGIGQVVYSAMCYPHGGMIDDGTLFRLGEHNF 517 >gi|312890318|ref|ZP_07749855.1| glycine cleavage system T protein [Mucilaginibacter paludis DSM 18603] gi|311297088|gb|EFQ74220.1| glycine cleavage system T protein [Mucilaginibacter paludis DSM 18603] Length = 359 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 52/308 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A+ +Q + + D L + S + G I+ L+ +++ T++L ++ S Sbjct: 56 LKGDHALDLIQKVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRVDAKTYMLVVNASN 115 Query: 74 RDSLIDKLLFYKLRS------------------NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + D + Y +Q + + L+ + +TFS F Sbjct: 116 IEKDWDWISKYNTFGVDMKNISDRTSLLAIQGPKAAEALQSLTDLDLASMEYYTFSKGKF 175 Query: 116 IDERFSIADVLLHRTWGHNEKIASD---IKTY--------------------HELRINHG 152 + + G E + + + LR+ G Sbjct: 176 AGVDNVLVSATGYTGAGGFEVYFDNEYAEEIWKAIFKAGEPFGIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + K + + + + R+ I Sbjct: 236 FCLYGNDI-DDTTSPLEAGLGWV--TKFNKE-FTNSAALQAQKQAGVSRRLVGIEMIDRG 291 Query: 213 LPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P I D IG + + + + + + + ++ K Sbjct: 292 IPRHDYEITDADGNTIGKVTSGTQSPSLQKPIGMGYVNTEFAKEGTEIYIKIRDNQIKAK 351 Query: 266 ASFPHWYK 273 + P +YK Sbjct: 352 VAKPPFYK 359 >gi|260433283|ref|ZP_05787254.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis ITI-1157] gi|260417111|gb|EEX10370.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis ITI-1157] Length = 1004 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 84/273 (30%), Gaps = 57/273 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 678 VKGPDAGKFLDMMYTNMMSTLKVGKCRYGLMCSENGFLIDDGVVARIDEDTWLCHTTTGG 737 Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110 + + + Y +NV E VV ++ Sbjct: 738 AERIHAHMEEWLQCEWWDWKVYV--ANVT-EQYAQVAVVGPNARKVLEKLGGMDVSREAL 794 Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---KIASDIKT----YHE----------------- 146 + D R D +R E +IA + Sbjct: 795 PFMEWRDGRIGGFDCRAYRISFSGELSYEIAVPASQGQAFWDALMEAGKEFGVMPYGTEC 854 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G + + T+ P D + IS K ++G+ R + R + Sbjct: 855 LHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKEDFLGKRAQERSHMTDPDRWK 911 Query: 204 PMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG 235 + + T + P G+ + + + V+G Sbjct: 912 LVGLETVDGSVLPDGAYAVGEGVNANGQRNVIG 944 >gi|163734282|ref|ZP_02141722.1| FAD dependent oxidoreductase, putative [Roseobacter litoralis Och 149] gi|161392290|gb|EDQ16619.1| FAD dependent oxidoreductase, putative [Roseobacter litoralis Och 149] Length = 720 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 55/239 (23%) Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 +S+ I+V G+ A+ F+ DV P + L QG I ++++ Sbjct: 489 MSSFGKIRVEGRDAVAFMNHVGGGQY--DV---PVGKIVYTQFLNHQGGIEADVTVTRLS 543 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102 E F++ + R + ++ ++ NV+I ++ GV+ Sbjct: 544 ETAFLVVTPAATRLADQTWMMRHRGDFNVVITDVTAGEGVLAIMGPNARKLLQQVSPADF 603 Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146 QE R + L + ++ A + HE Sbjct: 604 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEVYVSSDMAAHAFEVLHEAGQDLGVKL 663 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 R+ G D +A + + K +IG++ V R +HR Sbjct: 664 CGMHMMDCARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRRRHR 719 >gi|83646575|ref|YP_435010.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396] gi|83634618|gb|ABC30585.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396] Length = 376 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 79/323 (24%) Query: 7 SNQSFIKVC-------------GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL 53 S+ +++ G D++ L R + +G IL Sbjct: 59 SHMGQVRLKGAGAAEALEALVPG-------------DIVGLENGAQRYTLFTNDKGGILD 105 Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------- 98 +++ ED F++ ++ + ++ I L + L V IE+ Sbjct: 106 DLMVTNTGEDLFLV-VNAACKEQDIAHLRKH-LGDKVEIEVLEDRALLALQGPAAAGVME 163 Query: 99 -------------GVVLSWNQEHTF-SNSSFIDE-------RFSIADVLLHRTWGHNEKI 137 G + + F + S + E A+ L + H + Sbjct: 164 QLAPELTKLVFMTGAWATLDGAECFVTRSGYTGEDGYEISVPADRAEALARKLLAHPDVE 223 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-----NGISLTKGCYIGQEVVS 192 A + LR+ G+ D T A + + G + G +V Sbjct: 224 AIGLGARDSLRLEAGLCLYGHDLDTDTNL-VAANLKWVLSKPRRADGERAGGFPGADVTL 282 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARID 245 RKR + G I+ +G + G +A+ ++ Sbjct: 283 SEFAEGSPRKRVGLAPQGRAPVREGVEIVNGEGKVVGVVTS--GGYGPSVEKPVAMGYVN 340 Query: 246 KVDHAIKKGMALTVHGVRVKASF 268 A+ + V G V + Sbjct: 341 ADCSAMGTELKAIVRGKEVPVTV 363 >gi|58039556|ref|YP_191520.1| aminomethyltransferase (glycine cleavage system T protein) [Gluconobacter oxydans 621H] gi|58001970|gb|AAW60864.1| Aminomethyltransferase (Glycine cleavage system T protein) [Gluconobacter oxydans 621H] Length = 383 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 101/315 (32%), Gaps = 58/315 (18%) Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G A L+ ++ AD + L R + +G IL +++ + Sbjct: 60 SHMGQIRIAAKSGDVKDAAAALETLVPADFVGLAAGRQRYGLLTNEKGGILDDLMVANMG 119 Query: 62 EDTFILE------IDRSKRD-SLIDKLLFYKLRSNVIIEIQ------------------- 95 +D ++ D + + +L D+ + + ++ +Q Sbjct: 120 KDLLVVVNAGCKVQDADRIEKALSDRCVVTRQFDRALMALQGPAAEAALAPLCPAVKDMR 179 Query: 96 -------PINGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147 + GV ++ ++ F I + A+ + + + + L Sbjct: 180 FMDVIETELAGVPVTVSRSGYTGEDGFEIGCAGADAEKVARAILAQPDVLPIGLGARDSL 239 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNII 200 R+ G+ D T P +A + G+ +G Y G +VV + + Sbjct: 240 RLEAGLCLYGNDIDV-TTTPVEASLGWAIQKARREGGV--REGGYPGADVVLKQTRDGVA 296 Query: 201 RKRPMIITGTDDLPPSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAI 251 RKR ++ +G+ + D EIG + V A+ + Sbjct: 297 RKRVGLVADGRAPVRAGAKLFADAEGQKEIGVVTSGAFGPSVKAPVAMGYVTPEYAAVDT 356 Query: 252 KKGMALTVHGVRVKA 266 L V + Sbjct: 357 PVFAELRGKYVPLHV 371 >gi|83954245|ref|ZP_00962965.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] gi|83841282|gb|EAP80452.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1] Length = 371 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 60/311 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + T D+ R + +G+++ ++ + +D + L I Sbjct: 65 VELSGPDAARLIQYLTTRDMSKTRIGQGRYVPMCDHRGRLINDPVLLMLAQDRYWLSIAD 124 Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92 S K +++I L L Y + Sbjct: 125 SDIALWASAIAAERGWDVTVAEPDVSPLAVQGPKAEAVITALFGDWVRDLRYFGFKQTQL 184 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRI 149 P+ W+++ F R ++ +G +D++ RI Sbjct: 185 GDIPLVLARSGWSKQGGFEMYLQDSSRGGELWAMVKAAGAPFGIRPGAPNDVE-----RI 239 Query: 150 NHGIVDPNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 G+V D + P+D + L + + +IG+E + RI R+R + Sbjct: 240 ESGLVSYGADGRLQTNPSTPYDIGLGKLVDLETPED-FIGKEALRRIADEGAQRERSGFV 298 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG---------KKALAIARIDKVDHAIKKGMALT 258 L +G I D + GV+ + + D ++ + Sbjct: 299 IAGAPLTAAGHSIPVLDDKGQPRGVLSDYVYSKRFKANIGVGMIASDAKQASLHVVIGDE 358 Query: 259 VHGVRVKASFP 269 V ++ S P Sbjct: 359 ARNVTLR-SLP 368 >gi|156538178|ref|XP_001601025.1| PREDICTED: similar to Aminomethyltransferase [Nasonia vitripennis] Length = 413 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G+ + FL+++ TAD+ +L A + QG IL +I+K +D F + + Sbjct: 95 HVTGRDSGEFLESLTTADLQSLKQGSAGLTVFTNDQGGILDDLIITKDRDDKFFVVSNAG 154 Query: 73 KR 74 +R Sbjct: 155 RR 156 >gi|326572418|gb|EGE22410.1| glycine cleavage system aminomethyltransferase T [Moraxella catarrhalis BC8] Length = 366 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110 >gi|328722670|ref|XP_003247633.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial-like isoform 2 [Acyrthosiphon pisum] Length = 899 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 104/312 (33%), Gaps = 81/312 (25%) Query: 4 VYLSNQSFIKVCG-----KSA-------IPFLQAIITADVLTLPYKIARGSAILTPQGKI 51 + +S+ S +K+ G + +LQ++ T DV +P + +L +G Sbjct: 527 IDMSSFSKMKIQGKQDMNDDTESQCNGVVDWLQSLCTNDVN-IPVGGIVHTGMLNERGGY 585 Query: 52 LLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 L+ + E+ +++ S++ ++D L + L + I++ I + N Sbjct: 586 ENDCLLVRERENCYLMVSPTSQQTRVLDWLKDH-LPKDESIQLADITSMYTVVNI--IGP 642 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKI----ASD-----------------------IKTY 144 + + S D+ ++ + + ASD + Y Sbjct: 643 KAGALISELSQTDIDINVQPFTYKTVNIGYASDVMMMAFTHTGEPGFCLYIPSEYALHVY 702 Query: 145 HEL--------------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 L RI I D T P +A + + + L K Sbjct: 703 DRLISVGFDYGIRDVGSLTQRFMRIEKFIPFWAEDLTRDTT-PFEAGCN--HVVKLDKEY 759 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS-------PILTDDIEIGTLGVVVGK- 236 +IG+ + R + + I +K M I DDL P PI + +GT+ Sbjct: 760 FIGKFALQRQKDQGITKKLVMFIL--DDLDPDKDIWSWGLEPIYRNGKFVGTVTSAGYGF 817 Query: 237 -----KALAIAR 243 LA R Sbjct: 818 TMEKLVCLAYIR 829 >gi|224824001|ref|ZP_03697109.1| glycine cleavage system T protein [Lutiella nitroferrum 2002] gi|224603420|gb|EEG09595.1| glycine cleavage system T protein [Lutiella nitroferrum 2002] Length = 374 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 98/310 (31%), Gaps = 52/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G A L+ ++ DV+ LP + R + G IL +++ Sbjct: 56 SHMGQVKLIGAEAAAALETLVPIDVIDLPVGLQRYALFTNDDGGILDDLMVANFGGGVLY 115 Query: 67 LEIDRSKRDSLIDKLLF---YK-----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117 + ++ + + I L ++ L ++ +Q + + +F+ Sbjct: 116 VVVNAACKAQDIAHLKSKIGHRCEVVELTDRALLALQGPAAATVLARHAPAVAELTFMHC 175 Query: 118 ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELRINH 151 R +A V L E A + LR+ Sbjct: 176 TRVELAGVECYVSRSGYTGEDGYEISVPADHAEALARLLLAEPEVQAIGLGARDSLRLEA 235 Query: 152 GI------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G+ +D +T + ++ + G G Y G VV+R + RKR Sbjct: 236 GLCLYGHDIDTSTTPIEGSLLWAISKARRPGGE--RAGGYPGAAVVARHIAEGVQRKRVG 293 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258 ++ G+ ++ D IG + G LA+ + A+ + Sbjct: 294 LLVKDKVPVREGAELVDADGHTIGKVTS--GGFGPTLGAPLAMGYVASAHAALGTPLFAM 351 Query: 259 VHGVRVKASF 268 V G V Sbjct: 352 VRGKPVAVEV 361 >gi|328722668|ref|XP_003247632.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial-like isoform 1 [Acyrthosiphon pisum] Length = 889 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 69/284 (24%) Query: 20 IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79 + +LQ++ T DV +P + +L +G L+ + E+ +++ S++ ++D Sbjct: 545 VDWLQSLCTNDVN-IPVGGIVHTGMLNERGGYENDCLLVRERENCYLMVSPTSQQTRVLD 603 Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-- 137 L + L + I++ I + N + + S D+ ++ + + Sbjct: 604 WLKDH-LPKDESIQLADITSMYTVVNI--IGPKAGALISELSQTDIDINVQPFTYKTVNI 660 Query: 138 --ASD-----------------------IKTYHEL--------------------RINHG 152 ASD + Y L RI Sbjct: 661 GYASDVMMMAFTHTGEPGFCLYIPSEYALHVYDRLISVGFDYGIRDVGSLTQRFMRIEKF 720 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 I D T P +A + + + L K +IG+ + R + + I +K M I DD Sbjct: 721 IPFWAEDLTRDTT-PFEAGCN--HVVKLDKEYFIGKFALQRQKDQGITKKLVMFIL--DD 775 Query: 213 LPPSGS-------PILTDDIEIGTLGVVVGK------KALAIAR 243 L P PI + +GT+ LA R Sbjct: 776 LDPDKDIWSWGLEPIYRNGKFVGTVTSAGYGFTMEKLVCLAYIR 819 >gi|149908670|ref|ZP_01897331.1| glycine cleavage system T protein [Moritella sp. PE36] gi|149808212|gb|EDM68151.1| glycine cleavage system T protein [Moritella sp. PE36] Length = 364 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G A FL+ ++ DV L A + +L G ++ ++ ++ + Sbjct: 50 SHMTIVDIKGADAKSFLRYLLANDVAKLTVSGKALYTGMLQQDGGVIDDLIVYFFNDEYY 109 Query: 66 ILEIDRSKR 74 L ++ + R Sbjct: 110 RLVVNSATR 118 >gi|83951062|ref|ZP_00959795.1| aminomethyltransferase [Roseovarius nubinhibens ISM] gi|83838961|gb|EAP78257.1| aminomethyltransferase [Roseovarius nubinhibens ISM] Length = 377 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 92/303 (30%), Gaps = 63/303 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A + T D+ L + + +L QGK + +I ++ +F++ + Sbjct: 59 VHVIGPHASHVIDRATTRDIEKLKPGRSTYACMLNDQGKFVDDCVIYRMGPHSFMV-VHG 117 Query: 72 SKRDSLIDKLLFYKLRSNVII----------------------EIQPINGVVLSWNQEHT 109 S ++L NV + + I VV + T Sbjct: 118 SGAG--HEQLTMAATGRNVSVLFDDDMHDISLQGPLAVDYLEKHVPGIRDVVYFSHIHTT 175 Query: 110 FSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRINHG 152 R + + I + T LR Sbjct: 176 LFGKPVTISRTGYTGERGYEIFCRRQDAPLIWDTIVEEGAEMGIIPTRFTTLDLLRAESY 235 Query: 153 I---VDPNTDFLPSTIFPHDALMDLLNGISLT----KGCYIGQEVVSRIQHRNIIRKRPM 205 + N++ P PH + L G+ T K + G E R++ R + Sbjct: 236 LLFFPYDNSEMYPFEDEPHGDTLWEL-GLDFTVSKGKTGFRGAEEHYRLK--GKERFKIY 292 Query: 206 IITGTDDLPPS-GSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 + P + G+P+L D +E+G + + +A +D G ALT Sbjct: 293 GVKLDGTEPAAEGAPLLKDGVEVGVVTIGMYSPLNEHNVGIARMPVDCAVE----GTALT 348 Query: 259 VHG 261 V Sbjct: 349 VKN 351 >gi|332665554|ref|YP_004448342.1| Aminomethyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332334368|gb|AEE51469.1| Aminomethyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 377 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFI 66 V GK A+ +Q I T D L A+ SA+ QG I+ L+ ++ ED ++ Sbjct: 56 VRGKQALELIQQITTNDASKLGIGQAQYSAMPNEQGGIIDDLLVYRLPEDNCADGERAYM 115 Query: 67 LEIDRSKRD 75 + ++ S + Sbjct: 116 MVVNASNIE 124 >gi|326330489|ref|ZP_08196797.1| glycine cleavage system T protein [Nocardioidaceae bacterium Broad-1] gi|325951764|gb|EGD43796.1| glycine cleavage system T protein [Nocardioidaceae bacterium Broad-1] Length = 367 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 98/317 (30%), Gaps = 72/317 (22%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A L A++ + AR S I G I+ ++ ++EE+ Sbjct: 51 LSHMGEIEVTGPEAGRALDHALVGRP-SAIGIGRARYSMICAEDGGIIDDLVVYRLEEER 109 Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + S +L + Y V+ + ++ ++ D Sbjct: 110 YLVVANASNVHVVAPALASRAEGY---DAVVRDASAEWALIAVQGPASAAIVAALTDLDV 166 Query: 121 SIA-------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 +VLL RT E AS + Sbjct: 167 PSLRYYAIDAGTVAGVEVLLARTGYTGEDGFEIYCAPASAAAVWEALTEAGTPHGLQPAG 226 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199 LR+ G+ + T P +A + + +S K ++G+ ++ + Sbjct: 227 LACRDTLRLEAGMPLYGHELNRDTT-PFEAGLGRV--VSFDKPDGFVGEAALAVRRDEGP 283 Query: 200 IRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVGK------KALAIARIDKVDHAI 251 ++ P +G ++ EIG + A+A R D Sbjct: 284 RSVLVGLVAAGRRSPRAGYAVVDPASGDEIGVVTSGSPSPTLGRPIAMAYVRPD------ 337 Query: 252 KKGMALTVHGVRVKASF 268 L GV+V+ Sbjct: 338 -----LAAAGVKVQVDV 349 >gi|308178399|ref|YP_003917805.1| aminomethyltransferase [Arthrobacter arilaitensis Re117] gi|307745862|emb|CBT76834.1| aminomethyltransferase [Arthrobacter arilaitensis Re117] Length = 375 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 101/307 (32%), Gaps = 58/307 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G A L + ++ + A+ S IL +GKI+ ++ ++EE+ F Sbjct: 55 LSHMGEVYLTGPEAGKALNTALAGNLNVMKVGKAKYSLILNAEGKIIDDLIVYRLEEEKF 114 Query: 66 IL---------------------EI---DRSKRDSLID---------------------- 79 ++ ++ D S R SLI Sbjct: 115 LVVPNAGNAPVVAAELAARAAGFDVVVDDASDRQSLIAVQGPNAEAILKNLSADEATVQA 174 Query: 80 --KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-EK 136 +L +Y + V + + IN ++ I+ + A G + E Sbjct: 175 VTELKYY---AAVNVVLGGINVLLARTGYTGEDGFELIIENEDAAAMWEKTVEAGKDHEL 231 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQ 195 + + + LR+ G+ + P DA + +S K ++G+E + ++ Sbjct: 232 VPCGLASRDSLRLEAGMPLYGNELSLERT-PFDAGFGPV--VSFKKEENFVGREALEALR 288 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAI-KK 253 RK + G I+ D IG + L + VD + Sbjct: 289 GATPARKLVGLKGLGKRAGRGGYAIVKDGATIGEITSGQPSPTLGYPVALGYVDAEFGEV 348 Query: 254 GMALTVH 260 G L V Sbjct: 349 GTELEVD 355 >gi|293651802|pdb|3A8K|A Chain A, Crystal Structure Of Etd97n-Ehred Complex gi|293651803|pdb|3A8K|B Chain B, Crystal Structure Of Etd97n-Ehred Complex gi|293651804|pdb|3A8K|C Chain C, Crystal Structure Of Etd97n-Ehred Complex gi|293651805|pdb|3A8K|D Chain D, Crystal Structure Of Etd97n-Ehred Complex Length = 364 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDNLIVYYFTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ ++ ++ Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159 >gi|23014343|ref|ZP_00054164.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Magnetospirillum magnetotacticum MS-1] Length = 371 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 1/109 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A+ L++++ D+ L R S G IL +ISK+ ED Sbjct: 57 SHMGQAEIKGARAVELLESLVPGDIRALGLGKTRYSVFTNDHGGILDDLMISKLAEDHLF 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L I+ + + + L + L V + + ++ + ++ Sbjct: 117 LVINAACKHADFAHLKAH-LEGKVELRMIEDRSLLALQGPGAAAAMATL 164 >gi|146300317|ref|YP_001194908.1| glycine cleavage system aminomethyltransferase T [Flavobacterium johnsoniae UW101] gi|146154735|gb|ABQ05589.1| glycine cleavage system T protein [Flavobacterium johnsoniae UW101] Length = 360 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 101/315 (32%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + + D TL A+ S + +G I+ +I K++E+ ++ Sbjct: 49 SHMGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIIYKMKEEQYL 108 Query: 67 LEIDRSKRDSLIDKLLFY-----KLRS-------------NVIIEIQPINGVVLSWNQEH 108 L ++ S + + + Y ++R+ + +Q + V LS + Sbjct: 109 LVVNASNIEKDWNWISSYNDLGVEMRNLSDDYSLLAIQGPKAVEAMQALTSVDLSAITYY 168 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------H 145 F F I + G E K+ Y Sbjct: 169 HFEVGDFAGIEHVIISATGYTGSGGFEIYCKNNEVEQIWNKVFEAGAAYGIKPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK + E + + + + RK Sbjct: 229 TLRLEMGFCLYGNDI-NDTTSPLEAGLGWI--TKFTKD-FTNSEALKKQKEAGVARKLIA 284 Query: 206 IITGTDDLPPSGSPILTDDIEI------GTLG-VVVGKKALAIARIDKVDHAIKKGMALT 258 +P I+ + + GT+ + L + + + Sbjct: 285 FEMQERAVPRHDYEIVDGEGNVIGIVTSGTMSPSMNKGIGLGYVTVANSAVDSDIFIRIR 344 Query: 259 VHGVRVKASFPHWYK 273 + V K +YK Sbjct: 345 KNDVPAKVVKLPFYK 359 >gi|197336879|ref|YP_002158336.1| glycine cleavage system T protein [Vibrio fischeri MJ11] gi|197314131|gb|ACH63580.1| glycine cleavage system T protein [Vibrio fischeri MJ11] Length = 372 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 111/313 (35%), Gaps = 56/313 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L+A++ D++ LP + R + G I+ +++ D Sbjct: 54 SHMGQLRLKGQNAAAALEALVPVDIIDLPSQKQRYAFFTNDDGGIMDDLMVANFG-DHLF 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117 + ++ + ++ I L L ++V IE+ ++ + +N F+D Sbjct: 113 VVVNAACKEQDIAHLAA-NLPADVEIEVIEDRSLLALQGPQAADVLSRLQSSVANMLFMD 171 Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150 R + N+K+A +T + LR+ Sbjct: 172 TAVVEINGIECYVSRSGYTGEDGYEISVPNDKVAELAETLTSFEEVEWIGLGARDSLRLE 231 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202 G+ D T P +A + L IS + + G +V+ + I+ +++ RK Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWAISKNRRADGERAAGFPGADVILKQIETKDVNRK 288 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255 R ++ T G + +D EIG + ++A R D + Sbjct: 289 RVGLVGQTKAPVREGCKLYDANDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFA 348 Query: 256 ALTVHGVRVKASF 268 + + + Sbjct: 349 DVRGKKLPMTVEK 361 >gi|290991875|ref|XP_002678560.1| aminomethyltransferase [Naegleria gruberi] gi|284092173|gb|EFC45816.1| aminomethyltransferase [Naegleria gruberi] Length = 446 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ +KV G A FL+ + A+++ L AR + G IL +I+K E Sbjct: 92 SHMGQVKVSGADAQEFLEKVTPANIIQLKINQARLTQFTNENGGILDDLMITKKSESNGV 151 Query: 64 -TFILEIDRSKRDSLIDKL 81 F + I+ + DS + L Sbjct: 152 FDFYVVINAACVDSDMAHL 170 >gi|169614295|ref|XP_001800564.1| hypothetical protein SNOG_10285 [Phaeosphaeria nodorum SN15] gi|111061500|gb|EAT82620.1| hypothetical protein SNOG_10285 [Phaeosphaeria nodorum SN15] Length = 850 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 82/272 (30%), Gaps = 55/272 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A+ LQ + T+DV + +L G IL IS+++ D F ++ + Sbjct: 515 EVAGPGAVHLLQRLATSDVTK-QAGSITHTLLLNSHGGILSDIFISRLDGDLF--QVGAN 571 Query: 73 KRDSLI----------DK-----------------LLFYKLRS-NVIIEIQPINGVVLSW 104 L L + R+ +VI I P + S Sbjct: 572 TATDLAYLAREARKQTKHTPGQWAQVRDITGSTCCLGLWGPRARDVIRAISPEDFSNKSL 631 Query: 105 -----------NQEHTFSNSSFIDE---RFSIADVLLHRTWG-------HNEKIASDIKT 143 T SF+ E R W +A+ Sbjct: 632 PYMGVKKTSLAGIPVTMFRKSFVGEHGWEIQTTPEYGQRLWDLLWQSGKPQGLVAAGRAA 691 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202 ++ LRI GI +D P +A + + K + G+ + + + R+ Sbjct: 692 FNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFAGKAALEPLSRKTSARRL 749 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + + P+ + G + Sbjct: 750 RCLTVDDGRSMCLGKEPVFYNGKAAGYVTTAA 781 >gi|307325892|ref|ZP_07605091.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces violaceusniger Tu 4113] gi|306888384|gb|EFN19371.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces violaceusniger Tu 4113] Length = 832 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 83/275 (30%), Gaps = 59/275 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A+ FLQ + T + + +L G I ++++ E F + + Sbjct: 512 LTVTGPGALDFLQRMTTNQLAK-KPGAVTYTLLLDEAGGIRSDLTVARLSERHFQVGANG 570 Query: 72 SKRDSLIDKLLFYK-----LRSN---VII-EIQPINGVVLSWNQ----------EHTFSN 112 +D LL + RS V I +I P + W FS+ Sbjct: 571 GL---DLDWLLRHAPEGGTSRSKTGGVHIADITPGTCCIGVWGPLARDLVQPLTRDDFSH 627 Query: 113 SSF---------------IDERFSIADVLLHRTWGHNE-----------------KIASD 140 +F R S L + + IA+ Sbjct: 628 EAFGYFKARQTYIGHVPVTAMRLSYVGELGWELYTTADMGLRLWDTLWEAGRRHGVIAAG 687 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 ++ LR+ G D P++A + + + KG +IG+ + R Sbjct: 688 RSAFNSLRLEKGYRAWGHDMTTEHD-PYEAGVGF--AVRMDKGDFIGRAALKGRGERTAA 744 Query: 201 RKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVV 234 RK + G P+ D + G + Sbjct: 745 RKLTCLTLDDPAAVVMGKEPVYADGVPAGYVTSAS 779 >gi|227539214|ref|ZP_03969263.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227240896|gb|EEI90911.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 360 Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 52/305 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G + + LQ + + DV L + + G ++ FL +I+E T+ L ++ S Sbjct: 57 LKGDNVLDLLQKVSSNDVSKLYDGKVQYGYLPNENGGVVDDFLTYRIDEKTYFLVVNASN 116 Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + + + Y L + +Q + + L+ + +TF+ +F Sbjct: 117 IEKDWNWISKYNTYGVEMKDISDQTSLFAVQGPKAAEALQSLTDIELAPMEYYTFAKGTF 176 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152 + + G E ++ + LR+ G Sbjct: 177 AGVDNVLVSATGYTGAGGFEIYVANEDAQKVWDAIFEAGAAYGIKPIGLGARDTLRLEMG 236 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D +T P A + + TK ++ + + + +K Sbjct: 237 FCLYGNDIDDNTS-PLAAGLGWV--TKFTKD-FVNSANLKAEKEAGVKQKLVGFEMIDRG 292 Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 +P I+ D IG + L + + + ++ K Sbjct: 293 IPRHDYEIVDADGNVIGRVTSGTQSPSLKKSVGLGYVDQAFAKEGTEIFIHIRNQKIKAK 352 Query: 266 ASFPH 270 + P Sbjct: 353 VAKPP 357 >gi|300718217|ref|YP_003743020.1| aminomethyltransferase [Erwinia billingiae Eb661] gi|299064053|emb|CAX61173.1| Aminomethyltransferase [Erwinia billingiae Eb661] Length = 364 Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L ++ ++ + ED F Sbjct: 50 SHMTIVDLKGARTREFLRYLLANDVAKLTVPGKALYTGMLNASAGVIDDLIVYFMTEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L ++ + R+ + + + V + ++ ++ + + DE Sbjct: 110 RLVVNSATREKDLAWIGEHATPFGVELTLRDDLSLIAVQGPQAQEKAQTLFDE 162 >gi|19114927|ref|NP_594015.1| glycine decarboxylase T subunit [Schizosaccharomyces pombe 972h-] gi|12643537|sp|O14110|GCST_SCHPO RecName: Full=Probable aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|2388965|emb|CAB11698.1| glycine decarboxylase T subunit [Schizosaccharomyces pombe] Length = 387 Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 91/267 (34%), Gaps = 42/267 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G++A +L++I + + L + SA G I+ +ISK +E+T+ + + + Sbjct: 79 VRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIVTNAAC 138 Query: 74 RDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT----------------FSNSSFI 116 + L + V +E ++ E F S+++ Sbjct: 139 SEKDEANLKKHIENWKGVELERVQGRALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYV 198 Query: 117 DER-----FSIADVLLHRTWGHN--EKIASDIK---------------TYHELRINHGIV 154 D + FS + + + E+++ D LR+ G+ Sbjct: 199 DFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGARDTLRLEAGMC 258 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 +D T P + + + G K G ++G + + R+R I Sbjct: 259 LYGSDI-DDTTSPVEGSLSWIIGKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPA 317 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALA 240 GS + D +E+G + L Sbjct: 318 RH-GSAVEVDGVEVGQVTSGCPSPTLG 343 >gi|254466353|ref|ZP_05079764.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium Y4I] gi|206687261|gb|EDZ47743.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium Y4I] Length = 789 Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q I T ++ L +A+ P G ++ + ++ +D F Sbjct: 459 LSALRKFEITGPDAEALCQYIFTRNIKKLAVGQVVYTAMCYPHGGMIDDGTVFRLGKDNF 518 >gi|320163428|gb|EFW40327.1| glycine cleavage system protein T [Capsaspora owczarzaki ATCC 30864] Length = 408 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 49/269 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G + FL++++ ADV L A S +G I+ +IS + T + + Sbjct: 91 RLHGAQRVQFLESLVVADVAGLAETAATLSVFTNEKGGIIDDTVISNAGQ-TLYVVSNAG 149 Query: 73 KRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER--------- 119 D + L + + +Q + +L+ + + Sbjct: 150 CADKDLAHLNAQLARFNAEKKADVRLQIVETALLALQGPKAAAALQALVPSKDLSKLPFM 209 Query: 120 --------FSIADVLLHR------------------------TWGHNEKIASDIKTYHEL 147 +A+ + R + + + L Sbjct: 210 HGVDGVTVDGVANCRVTRCGYTGEDGFEISIPNQHAVQIAEKLLTNPAVKLAGLGPRDSL 269 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206 R G+ D T P +A + +G ++G +V+ + + R R + Sbjct: 270 RTEAGLCLYGNDI-DETTTPVEAALKWTIAKRRREQGGFLGDKVILQQLKDGVSRTRIGL 328 Query: 207 ITGTDDLPPSGSPI-LTDDIEIGTLGVVV 234 + S I D IG + Sbjct: 329 VADVGPAARQHSKILTADGEVIGEVTSGC 357 >gi|198472757|ref|XP_001356055.2| GA19575 [Drosophila pseudoobscura pseudoobscura] gi|198139149|gb|EAL33114.2| GA19575 [Drosophila pseudoobscura pseudoobscura] Length = 410 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 105/310 (33%), Gaps = 57/310 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK A L+++ TAD+L +P + QG IL +++K+ E + + + Sbjct: 87 VRGKDAAACLESVCTADILGIPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNAAM 146 Query: 74 RDS----LIDKLLFYKLR-SNVIIE-IQPINGVVLSWNQEHTFSN--------------- 112 + + +K + +V +E + P + +++ + Sbjct: 147 KQQDMNIISAAASSFKSQGRDVSVEFLAPSDQSLIAVQGPRVAAELAKLLAPATALDQLY 206 Query: 113 --SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKTYHE 146 SF+ I +V + R GH + + + Sbjct: 207 FMQSFVGTMAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDS 266 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ +D T P +A + L + G +VV Q + +++R + Sbjct: 267 LRLEAGLCLYGSDIDAQTT-PVEAALAWLVAKRRRAARDFPGADVVL-SQLKGGVQRRRV 324 Query: 206 IITGTDDLPPS---GSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258 + PP G I + ++G + + +A+ + + A + L Sbjct: 325 GLQMLGAKPPPARSGVAIFSGGQQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELK 384 Query: 259 VHGVRVKASF 268 V +A Sbjct: 385 VRDKVYEAEI 394 >gi|328849009|gb|EGF98199.1| hypothetical protein MELLADRAFT_51063 [Melampsora larici-populina 98AG31] Length = 413 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 92/268 (34%), Gaps = 44/268 (16%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G SA FL ++ A + T+ + S +L +G I+ +I+K + + L + + Sbjct: 99 KISGPSATEFLLKLLPASLKTMKPFTSTLSVMLNEEGGIIDDCMITKWSDQEWYLVTNAN 158 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------------ 120 +R ++ + + + IE+ G++ + + + +D+ Sbjct: 159 RRQRDLNWINQHIQSFDAKIEVMENWGLIALQGPKSSEILQTLLDDSSLKLNDTFFFGQS 218 Query: 121 ---SIADVLLH--------------------------RTWGHNEKIASDIKTYHELRINH 151 I + +H + + LR+ Sbjct: 219 VHTEINGIQVHIARSGYTGEDGFEISIPPNQSESITSSLLNQPGVTLAGLAARDSLRLEA 278 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ TD T+ +A + + I + ++G+E + I R+R ++ Sbjct: 279 GLCLYGTDL-DETVGVGEAGLGWV--IGNQRTGFLGEERTRKEIGSEIKRRRVGLLIEKG 335 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKAL 239 SG+ I +G + + +L Sbjct: 336 APARSGAMIFNKKNPVGVITSGIPSPSL 363 >gi|296194260|ref|XP_002744877.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Callithrix jacchus] Length = 866 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 99/317 (31%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + G+ +I L + + + S +LTP+G++ +S Sbjct: 532 IDLTPFGKFNIKGRDSIRLLDRLFANIIPKV--GFTNISHMLTPKGRVYAELTVSHQCPG 589 Query: 64 TFILEI-DRSKRDSL---------------IDKLL--FYKL-----RS-----NVIIEIQ 95 F+L S+ L I + F L R+ + E Sbjct: 590 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDEFGVLGVAGPRARKILQKLTSEDL 649 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------D 140 + + SN R S L + E + + Sbjct: 650 SEDVFKFLQTKSLKISNIPVTAIRISYTGELGWELYHRREDSVALYDMIMNAGQEEGIDN 709 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ ++ T P +A ++ + L K +IG++ + +I+ + Sbjct: 710 FGTYAMNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKAK 766 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TDD+ P G+ I + +G + A A I+ + Sbjct: 767 GLKRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPIELSEVG 826 Query: 251 IKKGMALTVHGVRVKAS 267 + + L Sbjct: 827 QQVEVELLGKNYPAVII 843 >gi|87300431|gb|ABD37402.1| GcvT [Shigella boydii] Length = 138 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ E+ F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTENFF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|407475|emb|CAA52800.1| T-protein of the glycine decarboxylase complex [Pisum sativum] Length = 408 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 88/280 (31%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK I FL+ ++ ADV L + +G + +I+K+ Sbjct: 80 SLFDVSHMCGLSLKGKDVISFLEKLVIADVAALANGTGTLTVFTNEKGGAIDDSVITKVT 139 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 ED L ++ ++ L Sbjct: 140 EDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199 Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + + ING + E F S + +A LL ++ G Sbjct: 200 KEDL-SKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKI 258 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G +V+ + Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDLE-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 315 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232 +R I+ + P S S I IG + Sbjct: 316 QLADGPSIRRVGFIS-SGPPPRSHSEIQDEGGNNIGEVTS 354 >gi|149201270|ref|ZP_01878245.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] gi|149145603|gb|EDM33629.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] Length = 404 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 102/308 (33%), Gaps = 55/308 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F+Q + D+ + + I +G IL ++ ++ E+ F + + Sbjct: 91 VEITGPDAARFVQMLTPRDLSKMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 150 Query: 72 SKRDSLIDKLLFYKLRS--NVII---EIQPIN-------------------GVVLSWNQE 107 S ++ + S +V I ++ P+ + W +E Sbjct: 151 S---DILLWAQGVAVHSGMDVTIGEPDVSPLQLQGPKSGLIMQELFGESIMELKYYWLRE 207 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151 + R + L + + + + T RI Sbjct: 208 LELDGIPLLVSRTGWSSELGYEIYLRDSAHGDALWERIMAAGMPFGLKPGHTSSIRRIEG 267 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ + D P++ +D L + + +IG+ + I+ + RK+ +I Sbjct: 268 GMLSYHAD-ADIKTNPYELGLDRLVNVDIEAE-FIGKAALRHIKAQGPSRKQIGLIIDGA 325 Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262 L + I +++G + V ALA+ + + + + + V Sbjct: 326 PLKGPNTTFWAINVAGVQVGKVTSAVYSPRLERNIALAMVAAEHANIGAEVEIVTSQGPV 385 Query: 263 R-VKASFP 269 R V P Sbjct: 386 RAVMVERP 393 >gi|119385078|ref|YP_916134.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222] gi|119374845|gb|ABL70438.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222] Length = 370 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A L+ ++ AD+ L R +G IL +I+ D + Sbjct: 53 SHMGQVILRGPGAAEALEGLVPADITGLAEGRQRYGLFTNAEGGILDDLMIANKG-DHLL 111 Query: 67 LEIDRSKRDSLIDKLL 82 L ++ + + I L Sbjct: 112 LVVNAACAEQDIAHLR 127 >gi|254455685|ref|ZP_05069114.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082687|gb|EDZ60113.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Candidatus Pelagibacter sp. HTCC7211] Length = 775 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 58/297 (19%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS ++ G A +Q +T +V L +A+ G +L + K + Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSVGQVVYTAMCYENGCMLDDGTLFKFGQ 501 Query: 63 DTF------------------------ILEIDRSKRDSLI-------DKLLFYKLRSNVI 91 D F ++ ++ L + + + Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKKYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTAPIQ 561 Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139 I + + + + + + R L + W H + + Sbjct: 562 PSITELEWFRFNIARIEHETGTPIVISRTGYTGELGYEIWCHPKDASEVWDKVWEAGKEF 621 Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 ++ +RI G++ +F T P +A + + +IG+E + I Sbjct: 622 DITPLGLEALDMVRIEAGLIFYGYEFNDQTD-PFEAGIGFTVPLKTKDDDFIGKEEL--I 678 Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV-----VGKKALAIARID 245 + + +++ + + P G + +IG + +GK +A+ RID Sbjct: 679 KRKANPQRKLVGLELVGHEPAVNGDCVHVGRAQIGEITSGMLSPKLGKN-IALCRID 734 >gi|66801565|ref|XP_629708.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4] gi|74851073|sp|Q54DD3|GCST_DICDI RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|60463092|gb|EAL61287.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4] Length = 403 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK + F ++I+ AD+ LP ++ S +G I+ +I+ D+ Sbjct: 73 SHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNAG-DSLY 131 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ D I + Sbjct: 132 VVVNAGCADKDISHIN 147 >gi|190891940|ref|YP_001978482.1| aminomethyltransferase [Rhizobium etli CIAT 652] gi|190697219|gb|ACE91304.1| aminomethyltransferase protein [Rhizobium etli CIAT 652] Length = 356 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 94/300 (31%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L+L R G IL +I+ + +D + ++ S +++ Sbjct: 49 EDAALALESLVPVDILSLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKEA 107 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 108 DLAHLQAHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 167 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A+ + R H + A + LR+ G+ D Sbjct: 168 VSRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 227 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G + G + R+R + + P G Sbjct: 228 TTS-PVEAALEWAMQKARRAGGTRAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 285 Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D EIG + V G A+ + + + + V S Sbjct: 286 HARLYADAEGQTEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTQVYAEVRGKFLPVTVS 345 >gi|119946355|ref|YP_944035.1| glycine cleavage system T protein [Psychromonas ingrahamii 37] gi|119864959|gb|ABM04436.1| glycine cleavage system T protein [Psychromonas ingrahamii 37] Length = 376 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 93/269 (34%), Gaps = 46/269 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G++A L+A++ D++ LP R + QG I ++ + D + Sbjct: 58 SHMGQVRLFGENAAEGLEALVPVDIMDLPVGKQRYAFFTNEQGGINDDLMVGNLG-DFLL 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----TFSNSSFIDERF-- 120 + ++ + + I L L S+V +E+ ++ + N + + RF Sbjct: 117 VVVNAACKQQDIAHLRA-NLPSDVRLEVIEDRALLALQGPQAVEVLAKINPAVNNMRFMD 175 Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 + A+ L E + LR+ Sbjct: 176 AMKIQLAGVECYVSRSGYTGEDGFEISVPAAQAEALARELLAFAEVEWIGLGARDSLRLE 235 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVV-SRIQHRNIIRKRP 204 G+ D T P +A + G + G +++ +I+ +NI RKR Sbjct: 236 AGLCLYGHDL-DETTTPVEASLLWGISKARRAEGSRPGGFPGADIILEQIKSKNITRKRV 294 Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGV 232 ++ + G + D +IG + Sbjct: 295 GLLGTSKAPVREGCELFDAADNKIGIVTS 323 >gi|260461847|ref|ZP_05810093.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|319785372|ref|YP_004144848.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032488|gb|EEW33753.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|317171260|gb|ADV14798.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 825 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 83/270 (30%), Gaps = 53/270 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEEDTFILEI 69 ++V G A F+ +I LP K R + +L G+I L I ++ +D F Sbjct: 494 VQVSGPGAAKFIDRLIPN---RLPSKPGRIALTHLLNENGRIELETTIVRLADDRFYFTC 550 Query: 70 DRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQE-----------HTFSNSSFID 117 L+D L F + +V I L+ N +N +F Sbjct: 551 AAFFEQRLLDYLRFARTDHDDVTITNLSDAWGALALNGPRSREILAPNTSAALTNEAFPW 610 Query: 118 E---------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD------- 155 R S A + G E I + HE+ G++D Sbjct: 611 LTAQEIEIAGEKVWAFRMSYAGEVGWEFHGPKESIPAVYDALHEIGDAMGLIDYGSFAMN 670 Query: 156 ---------PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 + P D++ + K + G++ + + Sbjct: 671 VMRLEKMFKGAGELTNEVTLPE---ADVMRFVKTDKAEFRGKQATLAALEKGPSWICAYL 727 Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVV 234 +D + G +L D ++G++ + Sbjct: 728 QIESDGVSDGNGGEAVLMGDRQVGSVTSIA 757 >gi|163795042|ref|ZP_02189011.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199] gi|159179861|gb|EDP64388.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199] Length = 367 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 41/302 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+ ++ D++ L R + G IL +++ D Sbjct: 56 SHMGQLRIDGHDAGSRLETLVPGDIVGLGTGRMRYTQFTNADGGILDDLMVTNAG-DHLF 114 Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + ++ + +++ L +L ++ +Q + + +F Sbjct: 115 VVVNAACKEADTALLKGSLGKAVVELPDRALLALQGPAAEGVLKTLAPAAAEMAFMTYAA 174 Query: 116 ----------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153 I A L + H + + LR+ G+ Sbjct: 175 MDVAGIPCFVTRSGYTGEDGYEISVPADRAATLAEQLLAHPDVEPIGLGARDSLRLEAGL 234 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D +T AL + +G + G + R+R I Sbjct: 235 CLYGHDIDTTTSPIEAALTWSIGKRRREEGGFPGAVRIQSEIANGPARRRVGIKPEGRAP 294 Query: 214 PPSGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ I D IG + V G A+ + + + + Sbjct: 295 AREGTEITDADGRAIGQVTSGGFGPSVDGPVAMGYVETGFAKDGTAVQLVVRGKPMPARV 354 Query: 267 SF 268 + Sbjct: 355 TR 356 >gi|134102150|ref|YP_001107811.1| glycine cleavage system aminomethyltransferase T [Saccharopolyspora erythraea NRRL 2338] gi|291007598|ref|ZP_06565571.1| glycine cleavage system aminomethyltransferase T [Saccharopolyspora erythraea NRRL 2338] gi|166221565|sp|A4FLG1|GCST_SACEN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|133914773|emb|CAM04886.1| putative glycine cleavage system protein T (aminomethyltransferase) [Saccharopolyspora erythraea NRRL 2338] Length = 367 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 50/310 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L++ I++ G A L + A+ + AR + I +G +L ++ ++ E + Sbjct: 51 LTHMGEIRISGPQAPEALDYALVANASAITVGRARYTMICNSEGGVLDDLIVYRLGEQEY 110 Query: 66 I----LEIDRSKRDSLIDKLLFY-KLRSNV-----IIEIQPINGVVLSWNQEHTFSNSS- 114 + L +++ + +V +I +Q V + T ++ Sbjct: 111 LVVANAANAAVVSAELAERVARFEASHEDVSDDYALIAVQGPKAVDILAPLTSTDLSTVK 170 Query: 115 -FIDERFSIAD--VLLHRTWGHNEK-------IASDIKTYHE------------------ 146 + R +A V+L RT E A + Sbjct: 171 YYAGYRSEVAGARVMLARTGYTGEDGFELFTSPADAPAVWQALADSGAEHGLRPAGLSCR 230 Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203 LR+ G+ + + + P A + + + L K G ++G+ ++ + RK Sbjct: 231 DTLRLEAGMPLYGNEL-SAELTPFHANLGRV--VKLDKPGDFVGKAPLAAAAEKPTERKL 287 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 + T P G +L EIG + +A+A +D+ + + Sbjct: 288 VGLRTDQRRAPRHGYRVLDAGGAEIGVVTSGAPSPTLGHPIAMAYVDRDHAEPGTALQVD 347 Query: 259 VHGVRVKASF 268 + G V Sbjct: 348 IRGTAVPVEV 357 >gi|68005366|ref|XP_670005.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56484827|emb|CAI01638.1| conserved hypothetical protein [Plasmodium berghei] Length = 222 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 F + P D D N IS KGCYIGQEV++R +++ +I K Sbjct: 64 FTFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 106 >gi|85704211|ref|ZP_01035314.1| aminomethyl transferase family protein [Roseovarius sp. 217] gi|85671531|gb|EAQ26389.1| aminomethyl transferase family protein [Roseovarius sp. 217] Length = 369 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 64/307 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A +Q + D+ + I+ G +L + K+ ED + + I D Sbjct: 66 VELRGPDAAKLMQMLTPRDLRGMTAGQCYYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118 + + + R +V+++ ++ + + + + F D Sbjct: 126 SDLLYWI--RATAHGWRLDVLVDEPDVSPLAVQGPRADDLMAAVFGDAVRDLRFFRFGHF 183 Query: 119 RFSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINHG 152 F D+++ R+ + + +H L RI G Sbjct: 184 DFQGRDMVIARSGYSKQGGFEIYVEGGDIGMPLWHALMEAGKGMDVHAGCPNLIERIEGG 243 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD 211 ++ D PH+ + GC IG++ + R+ +++ R + I G Sbjct: 244 LLSYGNDMTDDNT-PHECGLGKFCNTHTAIGC-IGRDALLRVAKEGPVQQIRALEIEG-A 300 Query: 212 DLPPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVR 263 +P P++ +G + A+A+ R+ D G Sbjct: 301 AVPRCDRWWPVMAGGKRVGRVSSATWSPDFGVNVAIAMVRMTHWDA-----------GTE 349 Query: 264 VKASFPH 270 V P Sbjct: 350 VTVETPE 356 >gi|82753086|ref|XP_727534.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23483427|gb|EAA19099.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 346 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 F + P D D N IS KGCYIGQEV++R +++ +I K Sbjct: 202 FTFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 244 >gi|310825894|ref|YP_003958251.1| putative glycine cleavage system T protein [Eubacterium limosum KIST612] gi|308737628|gb|ADO35288.1| putative glycine cleavage system T protein [Eubacterium limosum KIST612] Length = 342 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 87/284 (30%), Gaps = 51/284 (17%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 ++V G A FL ++ A + + A+ + +L G I+ ++ ++E++ + Sbjct: 33 LLEVKGPDAQAFLNKMLVASIGKMEIGEAKYTTMLNDDGIIIDDVIVFRVEKEVLWI--S 90 Query: 71 RSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE----------- 118 D+LI +K + V +I + + + F+ + Sbjct: 91 TLYIDALIAWFDAHKENAKVEYRDITEKTTMYAVQGPDSRAVLNDFLKDNIDSMKYFTIE 150 Query: 119 ------------RFSIADVLLHRTWGHN-------EKIASDIKTYHELRINHGIVDPNTD 159 R L + EK+A K + +I ++ + Sbjct: 151 NNMVGDIPVKIARSGYTGELGFEIYCFPEDKTFIEEKLADSGKQFDIKKITTDVIITSLP 210 Query: 160 FLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGT 210 + P +A + K ++G+ + +++ RK + Sbjct: 211 REKGFVLMSDLAGTNPLEADFGWT--VDWNKD-FVGKSALEKVKANGAKRKLIGFTVEDD 267 Query: 211 DDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVD 248 G+ + I G + V A+ +DK Sbjct: 268 AAQVKPGADVKVGGIVAGKVTMFTYGYTVEKNIGFALVDVDKAK 311 >gi|182677726|ref|YP_001831872.1| glycine cleavage system T protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633609|gb|ACB94383.1| glycine cleavage system T protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 384 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 95/300 (31%), Gaps = 47/300 (15%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT----FILEI 69 + G+ A L+ ++ D+ TL R + +L P+G IL +++++ +D L + Sbjct: 73 LEGQGAAARLETLVPGDLTTLAPGRMRYTQLLNPEGGILDDLMVTRLADDAAGERLFLVV 132 Query: 70 DRSKRDSLIDK-------LLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFIDER 119 + + + L L ++ +Q + + + T S I+ Sbjct: 133 NAATKAQDFAHIGASLPDLRLTLLEDRALLALQGPSAATVLAKHFPAVATMPFMSLIETE 192 Query: 120 FSIADVLLHR-----------------TWGHNEKIASDIKTY-------HELRINHGIVD 155 A + R E + D + + LR+ G+ Sbjct: 193 REGALWRISRSGYTGEDGFEIAVPAGAAEAFAETLLGDEEVWPIGLGARDSLRLEAGLCL 252 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLP 214 D P T L+ ++ G + G V R R+R + I G Sbjct: 253 YGHDIDPITTPIEAGLLWSISKRRREGGGFPGAARVQREIAEGPARRRVGLKIEGKIPAR 312 Query: 215 PSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + IG + G A +A+ + A + + V G + A+ Sbjct: 313 EGAKIETLEGEVIGLVTS--GGFAPSLGAPIAMGYVASAHAANGTALQVIVRGKPLAATI 370 >gi|254509474|ref|ZP_05121541.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium KLH11] gi|221533185|gb|EEE36173.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium KLH11] Length = 1004 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 89/295 (30%), Gaps = 68/295 (23%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 678 VKGPDAGKFLDMLYTNMMSTLKVGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 737 Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110 + + + Y +NV E VV ++ Sbjct: 738 AERIHGHMEEWLQTEWWDWKVYV--ANVT-EQYAQVAVVGPNARKVLEKLGGMDVSREAL 794 Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---KIASDIKT----YHE----------------- 146 + D R D +R E +IA + Sbjct: 795 PFMEWRDGRIGDFDCRAYRISFSGELSYEIAVPASQGQAFWDALMEAGKEFGVMPYGTEC 854 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR G + + T+ P D + +S K Y+G+ SR + R + Sbjct: 855 LHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKEDYLGKRAHSRSHMADPERWK 911 Query: 204 PMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVGK----KALAIARIDK 246 + T + P G+ + + + IG + + +A+ I Sbjct: 912 LAGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLERGIAMGLIKH 966 >gi|307946990|ref|ZP_07662325.1| glycine cleavage T protein [Roseibium sp. TrichSKD4] gi|307770654|gb|EFO29880.1| glycine cleavage T protein [Roseibium sp. TrichSKD4] Length = 789 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 89/296 (30%), Gaps = 62/296 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62 +V G A +Q +T ++ L +A+ G ++ + ++ E Sbjct: 464 EVVGPDAEELMQLCVTRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 523 Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPIN 98 L+ D+ ++ + L S + IE P Sbjct: 524 TSGLWLQEQALKRNMNVWVRNSTDQLHNIAVQGRNSREIL-SKIFWTPPQQPTIEELPWF 582 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DI 141 + ++ + S + R + L + + H + Sbjct: 583 RLTVA--RVGDVQGKSVVISRTGYSGELGYEIFCHPNDAVEVFDHVWEVGQEYGVAPLGL 640 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LRI G++ ++F T P +A + + +IG+ + + + Sbjct: 641 AALDMLRIEGGLIFAGSEFDDQTD-PFEAGIGFTVPLKSKPDDFIGRAAIE--ERKTHPH 697 Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIK 252 ++ + P G + ++G + + K +A+ R+ V A+ Sbjct: 698 RKLVGFEIEGGTVPLPGDCVRVGKAQVGEITSAIKSPMLGKVIALGRVSPVHAALD 753 >gi|227503236|ref|ZP_03933285.1| glycine cleavage system aminomethyltransferase T [Corynebacterium accolens ATCC 49725] gi|227076297|gb|EEI14260.1| glycine cleavage system aminomethyltransferase T [Corynebacterium accolens ATCC 49725] Length = 370 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 79/317 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL + I+ + +L A+ S I G I+ + + EE+ Sbjct: 51 LSHMGEIWVNGPDAGKFLSYSFISN-LDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110 F++ + D++ D+L R+ +V ++ + + +++ Sbjct: 110 FLVVPNAGNADTVWDELNK---RAEGFDVELKNESRDVAMIAVQGPKAAEILVPLVEDNK 166 Query: 111 -----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD--- 140 + + I R + W K ++ Sbjct: 167 QEAVYELGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGAEYDI 226 Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LR+ G+ + I P +A M + + ++G EV Sbjct: 227 KPCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMSR--AFAKKEADFVGAEV------ 277 Query: 197 RNIIRKRP-----MIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIAR 243 IRKR ++I+G +G+ + +D ++GT+ L AIA Sbjct: 278 ---IRKRAEEGPQVVISGLTSDQRRAARAGAEVFLNDTKVGTVTSGQPSPTLGHPVAIAL 334 Query: 244 IDKVDHAIKKGMALTVH 260 +D ++ G A+ V Sbjct: 335 LD-TSAELEPGTAVEVE 350 >gi|167041555|gb|ABZ06303.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_008G09] Length = 998 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 109/327 (33%), Gaps = 69/327 (21%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ I + G FL + T L LP AR +L G + ++I E+ Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRMYTNAWLKLPIGKARYGVMLREDGIVFDDGTTTRISEN 721 Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHT-----FSN 112 + + ++ +++ L +Y +L NV+ + G ++ + F N Sbjct: 722 HYHMTTTTAQAPTVLSHLEYYLQVVWPELNVNVVSTTEQWAGAAIAGPKSRELLSKLFPN 781 Query: 113 SSFIDERFSIADVLLHRTWGHNEKI---------------ASDIKTYHE----------- 146 +E + +G +I AS+ T+ Sbjct: 782 KDISNEGLPFMGYMEADLFGIPARIFRISFSGELAYEINVASNFGTFMWEKTIEQGQQFN 841 Query: 147 -----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 LRI G V L P+D ++ G+ K ++G+ ++R+ Sbjct: 842 IQPYGTEALSNLRIEMGHVAGPE--LDGRTIPYDVSLE---GLVNKKKDFVGKRSLNRVA 896 Query: 196 HRNIIRKRPMIITGTD--DLPPSGSPILTDDI------EIGTLGVVVGKK------ALAI 241 R++ + + D + P GS ++ D ++G + ALAI Sbjct: 897 FTLSTRQKVVGLVPIDKKTVIPEGSYLVKDAKAKLPNPKLGHISSSCWSVEYNNPFALAI 956 Query: 242 ARIDK--VDHAIKKGMALTVHGVRVKA 266 + K + + L + V+ Sbjct: 957 LQDGKNMIGEKLYAFSPLQNKTIPVEI 983 >gi|312112826|ref|YP_004010422.1| glycine cleavage system protein T [Rhodomicrobium vannielii ATCC 17100] gi|311217955|gb|ADP69323.1| glycine cleavage system T protein [Rhodomicrobium vannielii ATCC 17100] Length = 383 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 84/271 (30%), Gaps = 46/271 (16%) Query: 7 SNQSFIKVCGKS----AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ ++ G A F + ++ D+ L R + +L +G I+ + ++ + Sbjct: 64 SHMGQARIAGPDFATVAAAF-ERLVPGDIAGLKPGQIRYTQLLNDEGGIIDDLMATREAD 122 Query: 63 DT-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------- 108 T L ++ S+++ + + S V + +V E Sbjct: 123 GTGLFLVVNASRKEVDFAHIAAHLPPS-VTLAPLADRSLVALQGPEAARVLKRQMPEAGG 181 Query: 109 -TFSNSSFIDERFS----------------------IADVLLHRTWGHNEKIASDIKTYH 145 F ++ +D R + A+ H E + Sbjct: 182 LAFMTAAPLDWRGTAVFVSRSGYTGEDGFEISVPADAAEAFARSLLAHPEVAPIGLGARD 241 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204 LR+ G+ D T P +A ++ G + G +IG E V R R R Sbjct: 242 TLRLEAGLPLYGQDM-DETTSPIEAALEFSIGKRRRRDGGFIGAERVQRELAEGPARVRV 300 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV 234 + + I ++ +G + Sbjct: 301 GLRLEGRSAARTHMKIASETGETMGEITSGA 331 >gi|329297010|ref|ZP_08254346.1| glycine cleavage system aminomethyltransferase T [Plautia stali symbiont] Length = 365 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 46/122 (37%), Gaps = 3/122 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A + +L ++ ++ + ED F Sbjct: 50 SHMTIVDLHGARTHEFLRYLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMSEDFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123 L ++ + R+ + + + V + + ++ +R ++A Sbjct: 110 RLVVNSATREKDLTWIAEHAQPFGVALTERDDLALIAVQGPNAQQKAQGLFSAAQRDAVA 169 Query: 124 DV 125 + Sbjct: 170 GM 171 >gi|114767319|ref|ZP_01446142.1| probable aminomethyltransferase protein [Pelagibaca bermudensis HTCC2601] gi|114540572|gb|EAU43646.1| probable aminomethyltransferase protein [Roseovarius sp. HTCC2601] Length = 787 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 96/298 (32%), Gaps = 64/298 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A L +T ++ L +A+ G ++ + ++ E F Sbjct: 453 LSPLRKFEVTGPDAETLLNHCVTRNMEKLAVGQVVYTAVCATHGGMIDDGTVFRLGEHNF 512 Query: 66 ILE--IDRS---KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSN 112 D S R+ ++L L ++V + V L T + Sbjct: 513 RWIGGCDGSGMFMREE-AERL---GLDAHVRSSTDQLCNVALQGRHAQTILSQLFWTAPD 568 Query: 113 SSFIDE----RFSIA------------------DVLLHRTWGHNEKIAS----------- 139 S IDE RF++A L + + H + Sbjct: 569 RSSIDELGWFRFTVARLGDFQGTPVMISRTGYTGELGYEIFCHPKDAGEVFEAIWEAGQP 628 Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + LRI G+ +F T P +A + + + + G+ + Sbjct: 629 YGLKPLGLAALDMLRIESGLAFAGHEFDDQTD-PFEAGIGFTVPLKSKQADFSGR--AAL 685 Query: 194 IQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246 + + +++ + + +P G + +++G + K +A+AR+D Sbjct: 686 EERKAHPQRKLVGLEIDATTVPAHGDCVRLGRVQVGVVTSGTRSPTLGKTIALARLDA 743 >gi|302144120|emb|CBI23225.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++ Sbjct: 29 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVK 88 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 ++ L ++ ++ L Sbjct: 89 DNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 148 Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + +I ING + E F S + +A +L ++ G Sbjct: 149 KEDL-SKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 207 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D + P +A + G +G ++G EV+ + Sbjct: 208 RLTG--LGARDSLRLEAGLCLYGNDME-QHVTPVEAGLTWAIGKRRRAEGGFLGAEVILK 264 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 +R + + S S I D IG + Sbjct: 265 QLEEGPSVRRVGFFS-SGPPARSHSEIQDDKGNNIGEITS 303 >gi|2498933|sp|Q46337|SOXA_CORS1 RecName: Full=Sarcosine oxidase subunit alpha; Short=Sarcosine oxidase subunit gi|2127435|pir||I40889 sarcosine oxidase (EC 1.5.3.1) alpha chain [validated] - Corynebacterium sp gi|927591|gb|AAC43461.1| sarcosine oxidase alpha subunit [Corynebacterium sp.] Length = 967 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 87/288 (30%), Gaps = 63/288 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A FL I T L +AR + G + + ++ ED F++ Sbjct: 637 IEIRGADAAEFLNRIYTNGYTKLKVGMARYGVMCKADGMVFDDGVTLRLAEDRFLMHTTT 696 Query: 72 SKRDSLIDKL-------------------------------LFYKLRSNVI-IEIQPING 99 ++D L + V +++ Sbjct: 697 GGAAGVLDWLEEWLQTEWPELDVTCTSVTEQLATVAVVGPRSRDVVAKLVTGLDVSNDAF 756 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG---HNEKIASDI--------------K 142 +S+ S R S + L + H ++ D+ + Sbjct: 757 KFMSFQDVTLDSGIEARISRISFSGELAYEIAIPSWHGLRVWEDVYAAGQEFNITPYGTE 816 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 T H LR G + D T+ P DA M+ + +S K ++G+ SR + RK Sbjct: 817 TMHVLRAEKGFIIVGQD-TDGTVTPQDAGMEWV--VSKLKD-FVGKRSFSREDNLREDRK 872 Query: 203 RPMIITGTDDL--PPSGSPILTDDIE--------IGTLGVVVGKKALA 240 + + D G+ ++ D G + AL Sbjct: 873 HLVSVLPVDTALRLAEGAALVADGAVETEGCTPMEGWVTSSYNSPALG 920 >gi|307129418|ref|YP_003881434.1| aminomethyltransferase [Dickeya dadantii 3937] gi|306526947|gb|ADM96877.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex [Dickeya dadantii 3937] Length = 366 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F Sbjct: 50 SHMTIVDLRGVRVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH 108 L ++ + R+ + ++ + + V I + ++ + Sbjct: 110 RLVVNSATREKDLAWIVEH---AKPFMVEITEREDLSLIAVQGPQA 152 >gi|297203890|ref|ZP_06921287.1| sarcosine oxidase alpha subunit [Streptomyces sviceus ATCC 29083] gi|197713077|gb|EDY57111.1| sarcosine oxidase alpha subunit [Streptomyces sviceus ATCC 29083] Length = 937 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 91/275 (33%), Gaps = 55/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A FL I T L R + P G I + +++++ + Sbjct: 602 STLGKIEIWGADAGEFLNRIYTNAFKKLKPGTGRYGVMCKPDGMIFDDGVTLRLDDNRYF 661 Query: 67 LEIDRSKRDSLIDKLLFYKL---------------------------RSNV-----IIEI 94 + +++D L + R+ V +++ Sbjct: 662 MTTTTGGAANVLDWLEEWSQTEWPELDVRCTSVTEQWATIAVVGPQSRAVVGHLAPDLDL 721 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDI-------- 141 +++ + S R S + L + +G D Sbjct: 722 SNEAFPFMAFRETTLASGIPARVCRISFSGELAYEINVSAWYGLAVWEEVDAAGRPYGIT 781 Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G + D T+ P DA M + +S K +IG+ +R Sbjct: 782 PYGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSWV--VSKQKD-FIGKRSFARADTA 837 Query: 198 NIIRKRPMIITGTDDL--PPSGSPILTDDIEIGTL 230 RK+ + + D P G+ ++ D+++GT+ Sbjct: 838 RTDRKQLVGLLPADRTTRLPEGTQLVAPDVDLGTV 872 >gi|114046132|ref|YP_736682.1| glycine cleavage system aminomethyltransferase T [Shewanella sp. MR-7] gi|123030919|sp|Q0HZ30|GCST_SHESR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|113887574|gb|ABI41625.1| glycine cleavage system T protein [Shewanella sp. MR-7] Length = 364 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 56/165 (33%), Gaps = 3/165 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L I+ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F E+ + + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168 + + Y E+ + + + L + Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEVGYEIIVPETEAEALWQALLDQ 214 >gi|24372368|ref|NP_716410.1| glycine cleavage system aminomethyltransferase T [Shewanella oneidensis MR-1] gi|31340142|sp|Q8EIQ8|GCST_SHEON RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|24346323|gb|AAN53855.1|AE015522_10 glycine cleavage system T protein [Shewanella oneidensis MR-1] Length = 364 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 55/165 (33%), Gaps = 3/165 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L I+ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F E+ + + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168 + + Y E + + + L + Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEAGYEIIVPETEAEALWQALLDQ 214 >gi|119963309|ref|YP_946292.1| N,N-dimethylglycine oxidase [Arthrobacter aurescens TC1] gi|119950168|gb|ABM09079.1| putative N,N-dimethylglycine oxidase [Arthrobacter aurescens TC1] Length = 830 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 88/272 (32%), Gaps = 53/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ LQ + T D+ + +L G + ++++ EDTF L + Sbjct: 511 LEVSGPGALKLLQELTTGDLAK-KPGAVTYTLLLDEAGGVRSDITVARLSEDTFQLGANG 569 Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100 + + ++ + ++R S V + +G+ Sbjct: 570 NMDTAYFERAARHQTENGGAGDWVQVRDTTGGTCCIGLWGPLARDLISTVSSDDFSNDGL 629 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143 ++ T + R S L + + IA+ Sbjct: 630 KYFRAKKVTIGGVTVTAMRLSYVGELGWELYTSADNGQRLWDALWKAGQPFGVIAAGRAA 689 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202 + LR+ G +D P++A + + +TK ++G+ + R + + R Sbjct: 690 FSSLRLEKGYRSWGSDMTTEHD-PYEAGLGF--AVKMTKENFVGKAALEGRSEESSARRL 746 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + L P+ D +G + Sbjct: 747 RCLTVDDGRSLVLGKEPVFYKDQAVGYVTSAA 778 >gi|67906602|gb|AAY82706.1| predicted glycine cleavage system T protein [uncultured bacterium] Length = 302 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 I+V G A F +IT D + AR + +G +L ++ +I +D F Sbjct: 137 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNYKGGVLNDPILLRISQDEFW 191 >gi|291615314|ref|YP_003525471.1| glycine cleavage system T protein [Sideroxydans lithotrophicus ES-1] gi|291585426|gb|ADE13084.1| glycine cleavage system T protein [Sideroxydans lithotrophicus ES-1] Length = 361 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ +V L A SA+L P G ++ ++ + E+ F Sbjct: 52 SHMRVVDMKGAGVRQFLRYLLANNVDKLTMPGKALYSAMLRPDGHVIDDLIVYFMTEEWF 111 Query: 66 ILEIDRSKRDSLIDKLL 82 + ++ D I + Sbjct: 112 RIVVNAGTADKDIAWMK 128 >gi|71908081|ref|YP_285668.1| aminomethyltransferase [Dechloromonas aromatica RCB] gi|123774347|sp|Q47D83|GCST_DECAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|71847702|gb|AAZ47198.1| aminomethyltransferase [Dechloromonas aromatica RCB] Length = 363 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + V G FL ++ DV L A +A+L G ++ +I + + F + ++ Sbjct: 55 VDVVGADCRTFLSRLVANDVAKLKVSGKALYAAMLNEAGGVIDDLIIYFLTDTRFRIVVN 114 Query: 71 RSKRDSLIDKLLFYKLRSNV 90 + + + + V Sbjct: 115 AGTAEKDLAWMQ-----AKV 129 >gi|221067273|ref|ZP_03543378.1| glycine cleavage system T protein [Comamonas testosteroni KF-1] gi|220712296|gb|EED67664.1| glycine cleavage system T protein [Comamonas testosteroni KF-1] Length = 378 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A L++++ DV+ L R +L QG IL + ED F+ Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGQHKQRYGLLLNEQGGILDDLMFVNRGEDLFL 118 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + +++ I + Sbjct: 119 I-VNGACKEADIAHIQ 133 >gi|259418976|ref|ZP_05742893.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B] gi|259345198|gb|EEW57052.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B] Length = 1011 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 680 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 739 Query: 74 RDSLIDKL 81 D + + Sbjct: 740 ADRIHAHM 747 >gi|229496016|ref|ZP_04389740.1| glycine cleavage system T protein [Porphyromonas endodontalis ATCC 35406] gi|229317108|gb|EEN83017.1| glycine cleavage system T protein [Porphyromonas endodontalis ATCC 35406] Length = 362 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G +A+ FLQ + + D L + T +G I+ FL+ + EE+ +++ + + Sbjct: 56 VKGPNALAFLQKVSSNDASKLAVGQVQYCCFPTEEGGIVDDFLLYRYEEEKYMMVPNAAN 115 Query: 74 RD 75 + Sbjct: 116 VE 117 >gi|225021868|ref|ZP_03711060.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii ATCC 33806] gi|224945371|gb|EEG26580.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii ATCC 33806] Length = 369 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 2/107 (1%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A FL A+I+ + + A+ S I+ G I+ + ++ E+ Sbjct: 51 LSHMGEIRVTGPDAGAFLDYALISH-LSIIKVGKAKYSMIVNEDGHIIDDLITYRLGENE 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 F++ + D++ + + +V + + + +++ + + Sbjct: 110 FLVVPNAGNADTVFQAFVDRAAKFDVKLVNESTDTALIAVQGPNAEA 156 >gi|196001899|ref|XP_002110817.1| hypothetical protein TRIADDRAFT_54121 [Trichoplax adhaerens] gi|190586768|gb|EDV26821.1| hypothetical protein TRIADDRAFT_54121 [Trichoplax adhaerens] Length = 870 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 101/318 (31%), Gaps = 78/318 (24%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIE 61 LS+ + V GK A F+ ++ LP S ++TP+G++ + + ++E Sbjct: 554 LYDLSSYGKVTVKGKDAAKFISKVLAN---KLPEVGQVNVSHMITPKGRVYGEYEVLRLE 610 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS--------NVIIEIQPINGVVLSWNQEHT---- 109 ED F L + + LR +V I L+ + + Sbjct: 611 EDNFFLTCGAAA--------EKHHLRWLIENSAEYDVEINNVTEEWNCLAISGPKSREIL 662 Query: 110 --------FSNSSFIDE-----------------------------RFSIADVLLHRTWG 132 FS ++F + R S + L + W Sbjct: 663 AKATGSSNFSEANFPNHTCQMVLINGVEVGAVAMSFTGQFGWEFYVRSSDMEALHNNLWE 722 Query: 133 HNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189 + LR+ GI +F +T P +A ++ I TK +IG+E Sbjct: 723 AGSEFDIGHVGSYALSNLRVKAGIRALGLEFSVNT-NPIEAGLE--KYIDFTKP-FIGKE 778 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIA 242 V + + R+ + T D+ G+ + + + G A A Sbjct: 779 AVLAEKLKEASRQLVFLNVDTFDVDAEGNESIWVNDAVQGYTTSGGFDYEAKKGIAFAYL 838 Query: 243 RIDKVDHAIKKGMALTVH 260 V A G +L V Sbjct: 839 PPHLVKEA---GQSLQVD 853 >gi|24940586|gb|AAN65213.1|AF329398_3 sarcosine oxidase alpha subunit [Streptomyces roseochromogenes subsp. oscitans] Length = 962 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 87/295 (29%), Gaps = 65/295 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A FL I T L +AR + P G I + +++++ + Sbjct: 625 STLGKIEIWGADAGEFLNRIYTNAFKKLKPGMARYGVMCKPDGMIFDDGVTLRLDDNRYF 684 Query: 67 LEIDRSKRDSLIDKLLFY---------------------------KLRSNV-----IIEI 94 + ++D L + + R V +++ Sbjct: 685 MSTTTGGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWATIAVVGPRSREVVAQIAPQVDL 744 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKI 137 +++ + S R S + L ++ Sbjct: 745 SNDEFPFMAFRETTLASGVPARICRISFSGELAYEINVCAWYGLAVWEEVYAIGRPYGIT 804 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G + D T+ PHDA M + +S K +IG+ SR Sbjct: 805 PYGTETMHVLRAEKGYIIVGQD-TDGTVTPHDAGMSWV--VSKQKD-FIGKRSFSRTDTS 860 Query: 198 NIIRK---------RPMIITGTDDLPPSGSPILTDDIEI---GTLGVVVGKKALA 240 RK R + L G PI + + G + AL Sbjct: 861 RTGRKQLVGLLPADRTTRLPEGTQLVAPGVPITPESGPVPMLGHVTSSYHSPALG 915 >gi|50286351|ref|XP_445604.1| hypothetical protein [Candida glabrata CBS 138] gi|49524909|emb|CAG58515.1| unnamed protein product [Candida glabrata] Length = 391 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A L ++ D LP S +L G ++ +I+K +++ + + + Sbjct: 69 RLTGAEATKLLHSVTPTDFANLPQGTGSLSVLLNEHGGVVDDTIITKEQDNQYYIVTNAG 128 Query: 73 KRDSLIDKLL 82 D + L Sbjct: 129 CVDRDTEFLK 138 >gi|86133346|ref|ZP_01051928.1| glycine cleavage system T protein [Polaribacter sp. MED152] gi|85820209|gb|EAQ41356.1| glycine cleavage system T protein [Polaribacter sp. MED152] Length = 361 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 98/317 (30%), Gaps = 55/317 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G++A+ +Q + + D L A+ S + I+ + +I+ED ++ Sbjct: 49 SHMGEFLVSGENALALIQKVTSNDASKLEIGDAQYSCFPNTENGIVDDLICYRIKEDQYL 108 Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------------------------- 88 L ++ S + + + Y LR Sbjct: 109 LVVNASNIEKDWNWISKYNEEFGADLRDLSDDYSLLAIQGPKAVEAMQSLSSLDLADIPF 168 Query: 89 -NVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143 + + I V++S T S I + S + + +R + + + Sbjct: 169 YKFKVGDFAGIEHVIISATGY-TGSGGFEIYCKNSEVEQIWNRVFLAGAEFGIKPIGLAA 227 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G D T P +A + + TK ++ E +++ + RK Sbjct: 228 RDTLRLEMGYCLYGNDI-DDTTSPIEAGLGWI--TKFTKD-FVNSEALAKQKEEKPSRKL 283 Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMA 256 I +P G I+ D +IG + L + + Sbjct: 284 VAFILNERGIPRQGYDIVDDEGAKIGNVTSGTMSPNLSKGIGLGYVPTASSKVGSQILIQ 343 Query: 257 LTVHGVRVKASFPHWYK 273 + + +YK Sbjct: 344 IRKKAIPATVVKLPFYK 360 >gi|297180197|gb|ADI16418.1| glycine cleavage system t protein (aminomethyltransferase) [uncultured bacterium HF770_09N20] Length = 766 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A +Q ++T +V L SAI P G +L + ++ D F Sbjct: 436 LSPLRKFEVLGPDAEALMQHVLTRNVRRLAIGQVVYSAICYPHGGMLDDGTLLRLGPDNF 495 >gi|87300399|gb|ABD37386.1| GcvT [Shigella dysenteriae] Length = 138 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKTLYSGMLNASGGVIDDLIVYYFTEDFF 108 Query: 66 ILEIDRSKRDSLIDKLLFY 84 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQH 127 >gi|255640227|gb|ACU20404.1| unknown [Glycine max] Length = 407 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 39/80 (48%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK ++PFL+ ++ ADV L + +G + +I+K++ Sbjct: 79 SLFDVSHMCGLSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVK 138 Query: 62 EDTFILEIDRSKRDSLIDKL 81 +D L ++ RD + + Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158 >gi|254784590|ref|YP_003072018.1| glycine cleavage system aminomethyltransferase T [Teredinibacter turnerae T7901] gi|259647496|sp|C5BM95|GCST_TERTT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|237685380|gb|ACR12644.1| glycine cleavage system T protein [Teredinibacter turnerae T7901] Length = 363 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 91/302 (30%), Gaps = 41/302 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS-KIEEDT 64 S+ + + + G A FL+ ++ DV L A + +L G ++ ++ + Sbjct: 50 SHMTVVDIQGTGARDFLRYLLANDVDRLKLPGKALYTGMLNESGGVIDDLIVYLMVNGYR 109 Query: 65 FILEIDRSKRD-------------SLIDK--LLFYKL-----RSNVIIEIQPINGVVLSW 104 ++ ++D ++I++ L + R V I L Sbjct: 110 LVVNCATREKDLAWINSQAEAYDVTVIERPELAMIAVQGPLARGKVHDLIGAAVLEELKI 169 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELR 148 Q S + D + + + ++ + LR Sbjct: 170 FQGVPLSGEGYADWFVARTGYTGEDGYEIILPAEAAVQLWQDLARIGVTPCGLGARDTLR 229 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G+ + T P A M + +IG+E ++ + I K ++ Sbjct: 230 LEAGMNLYGHEMDDDTS-PLVANMAWTVAWEPAERNFIGREALTAEKSAGISHKLVGLVY 288 Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRVKA 266 + + + ++ +G + L + +V + V +++ Sbjct: 289 TGKGVLRAEQEVTAPGVDGVGVITSGTFSPTLGYSIALARVPVGFTDQAVVNVRNRQLEV 348 Query: 267 SF 268 Sbjct: 349 KI 350 >gi|222086091|ref|YP_002544623.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] gi|221723539|gb|ACM26695.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] Length = 356 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 90/302 (29%), Gaps = 56/302 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ S +++ Sbjct: 49 EDAALALESLVPIDILGLAEGRQRYGFFTDDNGGILDDLMITHM-DDYLFVVVNASCKEA 107 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L +I +Q V + + F+D R Sbjct: 108 DLKHLQDHIGDTCEVTLLDRALIALQGPRAVAVLAELWADLAYMKFMDVRHCRLHDVSCL 167 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A+ + R H + + LR+ G+ D Sbjct: 168 VSRSGYSGEDGFEISVPADKAEDIAKRLLEHPDVQPIGLGARDSLRLEAGLCLYGNDI-D 226 Query: 163 STIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T P +A ++ G+ G + G + R+R + + P Sbjct: 227 QTTTPVEAALEWGMQKARKTGGV--RAGGFPGSTRILAELDNGASRRR-VGLKPEGKAPV 283 Query: 216 SG-SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 G + + D EIG + V A+ + + + V Sbjct: 284 RGHAKLYADAGGKTEIGEVTSGGFGPSVESPVAMGYVPVSFAAPGTPIFAEVRGKYLPVT 343 Query: 266 AS 267 + Sbjct: 344 VA 345 >gi|145351666|ref|XP_001420189.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580422|gb|ABO98482.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 414 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 92/268 (34%), Gaps = 50/268 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V GK A FL++++ AD+ L S + +G I+ +I+K+ + F + ++ Sbjct: 94 SVRGKDATAFLESLVVADLKGLKDGTGTLSVMTNEKGGIIDDTVITKVNSNDFYVVLNAG 153 Query: 73 KRD---------------------------------------SLIDKLLFYKLRSNVIIE 93 + S++ +L + L S + Sbjct: 154 CAEKDQAHINAALAKAKAKGMDVEFVVHSDRSLLAFQGPKTMSVLQRLTDFDL-SKLYFG 212 Query: 94 IQPINGVVLS--WNQEHTFSNSSFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRI 149 + + + W ++ + AD L R E + + LR+ Sbjct: 213 MFTSMKINGADCWVTRTGYTGEDGFEISVPNADAMKLAERLESEKEVRMAALGPRDSLRL 272 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI--QHRNIIRKRP-M 205 G+ D I P +A + G + + C + G E++ + + I ++R + Sbjct: 273 EAGLCLYGNDL-NEDITPPEAGLAWTIGKARRELCDFTGGEIIKKQLEDPKAIPQRRVGL 331 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232 TG S IL TD +IG + Sbjct: 332 TFTGKGAPARQHSLILDTDGNQIGEVTS 359 >gi|302542341|ref|ZP_07294683.1| glycine cleavage system T protein [Streptomyces hygroscopicus ATCC 53653] gi|302459959|gb|EFL23052.1| glycine cleavage system T protein [Streptomyces himastatinicus ATCC 53653] Length = 375 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G A L A++ + L AR + I +G IL ++ ++ E Sbjct: 55 LSHMGEIALTGPQAADALDHALV-GHLSALAVGRARYTMICDSEGGILDDLIVYRLAEQE 113 Query: 65 FILEIDRSKRDSLIDKLL 82 +++ + S ++D L Sbjct: 114 YLVVANASNAQVVLDALT 131 >gi|119504737|ref|ZP_01626815.1| sarcosine dehydrogenase [marine gamma proteobacterium HTCC2080] gi|119459342|gb|EAW40439.1| sarcosine dehydrogenase [marine gamma proteobacterium HTCC2080] Length = 863 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 18/184 (9%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59 + LS+ + V G A L+ + V L P + L G + I + Sbjct: 518 INLSHFAIFDVVGADAEALLEYLS---VAKLGTNTPIGKGVYTHFLDHTGGVRSDLTIVR 574 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI----IEIQPINGVVLSWNQEHTFSNSSF 115 + ED F + + ++ + + I+ + W E + Sbjct: 575 LAEDAFRVICGGDTGYRDYVWMKKFRGKLGLTNVEFIDQSEQLATLGLWGPEARSTLQKL 634 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 +D+ S++ T E +K + RI++ + + + FP + L Sbjct: 635 MDDPDSVSGEAFPYT-MTREIDVLGVKVW-AFRISY-VGEQGWEL----YFPFADGLKLW 687 Query: 176 NGIS 179 + ++ Sbjct: 688 DALA 691 >gi|299532151|ref|ZP_07045545.1| glycine cleavage system T protein [Comamonas testosteroni S44] gi|298719813|gb|EFI60776.1| glycine cleavage system T protein [Comamonas testosteroni S44] Length = 378 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A L++++ DV+ L R +L QG IL + +D F+ Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNRGDDLFL 118 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + ++ + +++ I + ++ S + P ++ + + S I Sbjct: 119 I-VNGACKEADIAHIQ-SRIASRCEVVPLPERALLALQGPQAVTALSRLI 166 >gi|85704597|ref|ZP_01035699.1| aminomethyl transferase family protein [Roseovarius sp. 217] gi|85671005|gb|EAQ25864.1| aminomethyl transferase family protein [Roseovarius sp. 217] Length = 380 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 106/318 (33%), Gaps = 75/318 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A F+Q + D+ + + I +G IL ++ ++ E+ F + + D Sbjct: 67 VEITGPDAARFVQMLTPRDLSKMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 126 Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90 +S++D L +Y LR Sbjct: 127 SDILLWAQGVAVHSGLDVTIGEPDVSPLQLQGPKSGLIMQELFGESIMD-LKYYWLR--- 182 Query: 91 IIEIQPINGVVL--SWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 +E+ I +V W+ E ++ + ER A + GH I Sbjct: 183 ELELDGIPLLVSRTGWSSELGYEIYLRDSAHGDALWERIMAAGMPFGLKPGHTSSI---- 238 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 RI G++ + D +T P++ +D L + + +IG+ + ++ R Sbjct: 239 -----RRIEGGMLSYHADADINT-NPYELGLDRLVNLDIEAE-FIGKAALRGLRDAGPRR 291 Query: 202 KRPMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 K+ +I + L + I +G + V ALA+ + + + Sbjct: 292 KQIGLIIDSAPLKEPNTTFWAINVAGTPVGKVTSAVYSPRLERNIALAMVAAEHANVGAE 351 Query: 253 KGMALTVHGVR-VKASFP 269 + VR V P Sbjct: 352 VEVVTGQGPVRAVMVERP 369 >gi|162148100|ref|YP_001602561.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter diazotrophicus PAl 5] gi|161786677|emb|CAP56260.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter diazotrophicus PAl 5] Length = 409 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 56/315 (17%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+ ++ AD+L+L R + + QG I+ ++S++ Sbjct: 86 SHMGQIRLRARSGRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSRVG 145 Query: 62 EDTFILEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 DT +L ++ + +D+ + + L +I +Q ++ Sbjct: 146 -DTLLLVVNAACKDADLAHITAALDDACIVESLPDRALIALQGPLAGAALARLAPASADM 204 Query: 114 SFID-ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHE 146 F+D F +A V + E + Sbjct: 205 RFMDVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDS 264 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ +D P T P + ++ G + G +++ R Sbjct: 265 LRLEAGLCLYGSDIGPDTT-PVEGALEWSIQKSRRAGGARAGGFPGADIILARIQDGAAR 323 Query: 202 KRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHAIK 252 +R I G+ + D +G + A+ I Sbjct: 324 RRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGAPVAMGYVDIAHAATGTA 383 Query: 253 KGMALTVHGVRVKAS 267 L V V + Sbjct: 384 LFAELRGKYVPVTVA 398 >gi|209550886|ref|YP_002282803.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536642|gb|ACI56577.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 816 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 88/317 (27%), Gaps = 57/317 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++ G+ A +L +IT V + +G+I+ + +EE+ F Sbjct: 497 LPGFSRYRLQGEGARDWLLGLITGKVPK--PGRIGLAYFADDKGRIVTEMSVMALEENLF 554 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDE---- 118 L + + L + L + + + + + + D Sbjct: 555 FLTTAATAQWHDFAWLQKH-LPKDASFTLDDVTDNLACQILSGPQSRAILAEVTDADLSK 613 Query: 119 ------------------RFSIADVLLHRTWGHNEKIAS-----------------DIKT 143 R S L + A+ ++ Sbjct: 614 PWLTHLSCQIAGRRLQLVRVSFVGELGWELHTEMDDTATVFDAVWAAGGKHGLKPFGMEA 673 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G D ++ + K + G+ ++R + + + ++ Sbjct: 674 LDSLRIEKGYRAWKGDLSTDYTM-LQGGLERF--VDWAKPDFKGKAALAREKQQGVTKRF 730 Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256 + + + P S + D +G V AL + R D + + Sbjct: 731 VTLAVEAGECDAPYMSTLWRDGQLVGETTSGNWGYRVGKSVALGMLRSDLAVPGTELEVE 790 Query: 257 LTVH--GVRVKASFPHW 271 + V+ P W Sbjct: 791 IFGDRFKAVVQPDRPLW 807 >gi|327541818|gb|EGF28330.1| glycine cleavage system aminomethyltransferase T [Rhodopirellula baltica WH47] Length = 388 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 55/306 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63 S+ ++ G A FL ++T V + R + +G +L L+S E Sbjct: 67 SHMGRLRFDGDHAAEFLDHVLTRRVTDMVPGQVRYGMVCNAEGGVLDDVLVSFLQTPSER 126 Query: 64 TF-ILEIDRSKRDSLIDKLLFY------KLRSN-----VIIEIQPINGVVLSWNQEHTFS 111 F +L ++ S R+ ++ + S+ +I IQ + + Sbjct: 127 RFHLLVVNASNREKILKWFEPHLADFPTVTMSDRTELTAMIAIQGPMAIEVCKKLFSIDP 186 Query: 112 N-----SSFIDERFSIADVL-------------------LHRTW-------GHNEKIASD 140 + ++FI ++F ++ HR W + + Sbjct: 187 SRLKNYNAFITDQFKKPVIVSRTGYTGEDGLELIVRAEEAHRVWENVLLAGREAGFVPAG 246 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ G+ + TI P A + G +L +IG++ + + + Sbjct: 247 LGARDTLRMEAGMPLYGHEL-DETIDPITAGLKF--GCNLKDRHFIGEDALRAVAEQGPT 303 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 R R ++ G +L D +IG + L A+A ID HA Sbjct: 304 RCRIGLLPTGKRPAREGCDVLNADGEKIGQVTSGGPSPTLGVPIAMATID-AKHAKDPSF 362 Query: 256 ALTVHG 261 + + G Sbjct: 363 QIDIRG 368 >gi|294463461|gb|ADE77260.1| unknown [Picea sitchensis] Length = 254 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK +PFL+ ++ ADV L + +G + +++K++ Sbjct: 21 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLSPGSGTLTVFTNEKGGAIDDSIVTKVK 80 Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLR 87 +D + ++ RD + + +K R Sbjct: 81 DDHIYIVVNAGCRDKDLAHIESHMKAFKAR 110 >gi|55670453|pdb|1VLO|A Chain A, Crystal Structure Of Aminomethyltransferase (T Protein; Tetrahydrofolate-Dependent) Of Glycine Cleavage System (Np417381) From Escherichia Coli K12 At 1.70 A Resolution Length = 381 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S L G ++ ++ ED F Sbjct: 62 SHXTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGXLNASGGVIDDLIVYYFTEDFF 121 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L ++ + R+ + + + + I ++ + ++ Sbjct: 122 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSXIAVQGPNAQAKAATL 171 >gi|114321723|ref|YP_743406.1| glycine cleavage system aminomethyltransferase T [Alkalilimnicola ehrlichii MLHE-1] gi|114228117|gb|ABI57916.1| glycine cleavage system T protein [Alkalilimnicola ehrlichii MLHE-1] Length = 364 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 90/279 (32%), Gaps = 42/279 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP---YKIARGSAILTPQGKILLYFLISKIEED 63 S+ + + G+ A L+ I+ ADV L A +L G I+ ++ + + Sbjct: 49 SHMAITDLEGQGARDALRLILAADVARLDEAAPGKALYGCLLNEAGGIIDDLIVFRRGAE 108 Query: 64 TFILEIDRSKRDSLIDKLLF----YKL----RSNVI------------IEIQPINGVVLS 103 + + + + R S+ L + L R+++ IE P + Sbjct: 109 RYRIVSNAATRGSVQRWLERLTAAFGLQPEARTDLAMIALQGPAAPSLIEQLPEAAAAVG 168 Query: 104 WNQEHTFSNSSFIDER----------FSIADVLLHRTWGHNEKIAS---DIKTYHELRIN 150 R + +TW H + + LR+ Sbjct: 169 LGAFEALDGERIFVSRTGYTGEDGFELILPGPRASQTWDHLVAAGARPCGLAARDSLRLE 228 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210 G+ D P T P + + + +IG+ + + R ++ Sbjct: 229 AGLNLNGQDMTPETT-PLECGLGWTVHWTPEDRDFIGRHPLEAQRREGAPWCRQGLVLRE 287 Query: 211 DDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARI 244 +P G +L D IG + V ++ +A+AR+ Sbjct: 288 RGVPRHGHAVLDAADRVIGEVTSGGWSPVLQRGIALARV 326 >gi|42522271|ref|NP_967651.1| aminomethyltransferase [Bdellovibrio bacteriovorus HD100] gi|59797772|sp|Q6MQ03|GCST_BDEBA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|39574802|emb|CAE78644.1| aminomethyltransferase [Bdellovibrio bacteriovorus HD100] Length = 360 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++V G A+ L+ + T DV L A+ S + QG ++ ++ + +D+ Sbjct: 49 SHMGEVRVKGPKALETLEWLTTNDVSKLNDGEAQYSLLPNDQGGLVDDIIVYCLSKDSDY 108 Query: 67 LEI-DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 L + S +D + + +++ + + G + + Sbjct: 109 LVCVNASNKDKDFAWMTKHNKGADIT-DESDLWGQIAIQGPKA 150 >gi|260463905|ref|ZP_05812101.1| glycine cleavage system T protein [Mesorhizobium opportunistum WSM2075] gi|259030280|gb|EEW31560.1| glycine cleavage system T protein [Mesorhizobium opportunistum WSM2075] Length = 366 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 37/261 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A+ L D L ++ S L G IL +I+++ + F+ Sbjct: 55 SHMKLFEVSGPQAVALLDRACPLDAGALEISQSKLSFFLNEAGGILDDLIITRLGDARFM 114 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 + + + L L + ++P++ V L+ ++ S Sbjct: 115 VVANAGNAVADEKHLR--DLAKDFDATVEPLDRVFLAIQGPEAWAVLSRAGIETGSLLFM 172 Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152 ++ R + D L+ + + + LR+ G Sbjct: 173 HGVEPRKSWFMSRSGYTGEDGFEIGLPVTDARDLVTKLLEDERVLWIGLAARDSLRLEAG 232 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D P T ALM + G +IG + + R +KR + Sbjct: 233 LCLHGQDITPETDPAAAALMWAIPKEIRATGAFIGADALRAAVERGPTQKRVGLKPEGRQ 292 Query: 213 LPPSGSPIL-TDDIEIGTLGV 232 +G+ + D G + Sbjct: 293 PVRAGAALFDADGNPAGHVTS 313 >gi|85702849|ref|ZP_01033953.1| putative aminomethyltransferase protein [Roseovarius sp. 217] gi|85671777|gb|EAQ26634.1| putative aminomethyltransferase protein [Roseovarius sp. 217] Length = 789 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G + Q + T D+ LP +A+ P G ++ + ++ +D F Sbjct: 459 LSALRKFEITGPDSEALCQYVFTRDIKKLPVGGVVYTAMCYPHGGMIDDGTVFRLGQDNF 518 >gi|108800275|ref|YP_640472.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp. MCS] gi|119869403|ref|YP_939355.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp. KMS] gi|108770694|gb|ABG09416.1| aminomethyltransferase [Mycobacterium sp. MCS] gi|119695492|gb|ABL92565.1| aminomethyltransferase [Mycobacterium sp. KMS] Length = 364 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 60/303 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A ++ + +T D+ + A+ + G ++ + + +D Sbjct: 52 SHLGKALVRGPGAAAYVNSALTNDLNRIGPGKAQYTLCCNDSGGVIDDLIAYYVSDDEIF 111 Query: 67 LE---------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHT 109 L + RS ++ +Q V+ Sbjct: 112 LVPNAANTAAVVAALAERAPDGVTVTDEH------RSYAVLAVQGPKSAEVLGGLGLPTD 165 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------------- 146 ++D + V + RT E+ + + + Sbjct: 166 MDYMGYVDAELNGTAVRVCRTGYTGEQGYELLPAWDDAPAVFDALVSAVRDAAGELAGLG 225 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR- 201 LR G + P I P A + K + G++ + + R Sbjct: 226 ARDTLRTEMGYPLHGHELSPE-ISPLQARCGW--AVGWRKDAFWGRDALLAEKEAGPKRL 282 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 R + G L P + + D +G K +A+A +D H I G + Sbjct: 283 LRGLRAVGRGVLRPDLT-VFDGDTAVGVTTSGTFSPSLKVGIALALVDTA-HDIADGSRV 340 Query: 258 TVH 260 V Sbjct: 341 EVD 343 >gi|332526792|ref|ZP_08402894.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2] gi|332111195|gb|EGJ11227.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2] Length = 379 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 56/314 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64 S+ +++ G A L+ ++ DV+ L R + G +L +IS+ T Sbjct: 57 SHMGQVRLSGADAAAALETLVPVDVVDLAVGRQRYAFFTNEHGGLLDDLMISRPAPGTGF 116 Query: 65 --FILEIDRSKRDSLIDKLLF---YK-----LRSNVIIEIQ-------------PINGVV 101 L ++ +D+ + L ++ L ++ +Q + +V Sbjct: 117 GDLFLVVNAGCKDADLRHLQTNIGHRCTVVGLPERALLALQGPLAADALARLNPGVKDLV 176 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------------ASDIKTYHEL 147 +++ R E+ + + L Sbjct: 177 FMTGGVFELADAPCFVTRSGYTGEDGFEISVPAERAEALASALLALPEVKPAGLGARDTL 236 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQHRNII 200 R+ G+ D +T P +A + G +G Y G + R + Sbjct: 237 RLEAGLCLYGHDIDANTS-PVEAGLSWAIQKVRRPGGA--REGGYPGTAAIERHLAGGAL 293 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV------VVGKKALAIARIDKVDHAIKK 253 RKR ++ G+ I+ +G + V A+A D + Sbjct: 294 RKRVGLVGLERVPVREGTAIVDAHGHALGRVTSGTLAPGVDRPIAMAYLPRDHAAPEHEV 353 Query: 254 GMALTVHGVRVKAS 267 + + ++ + Sbjct: 354 YAEVRGKRLPMRVT 367 >gi|227504649|ref|ZP_03934698.1| glycine cleavage system aminomethyltransferase T [Corynebacterium striatum ATCC 6940] gi|227198759|gb|EEI78807.1| glycine cleavage system aminomethyltransferase T [Corynebacterium striatum ATCC 6940] Length = 370 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 102/304 (33%), Gaps = 53/304 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G+ A FL +D+ L A+ S I G I+ + +++E F Sbjct: 51 LSHMGEIWVNGEDAAKFLSYSFISDLTNLKVGKAKYSMICAEDGGIIDDLITYRLDETKF 110 Query: 66 ILEIDRSKRD----SLIDKLLFYKL------RSNVIIEIQ-PINGVVLSWNQEHTFSNSS 114 ++ + D +L ++ + + R +I +Q P +L E T + Sbjct: 111 LVVPNAGNADVVWEALNERAEGFDVDLNNESRDVAMIAVQGPKAAEILIPLVEDTKQEAV 170 Query: 115 FIDERFSIADVLLHRTWGHN------------------------EKIASDIKTYH----- 145 ++ + R + +++ Y Sbjct: 171 MELPYYAAMTGKVARKYAFICRTGYTGEDGFELIVYNSDAPELWQELLKAGAEYDIRPCG 230 Query: 146 -----ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ + I P +A M + + ++G +V+ + Sbjct: 231 LAARDSLRLEAGMPLYGNELTRD-ITPVEAGMSR--AFAKKEQDFVGAKVLRQRAEEGPQ 287 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256 +++ +GS + + ++GT+ L A+A ID ++ G A Sbjct: 288 AVITGLVSSQRRAARAGSEVFVGENKVGTVTSGQPSPTLGHPVALALIDTAAG-LEPGAA 346 Query: 257 LTVH 260 + V Sbjct: 347 VEVD 350 >gi|170101120|ref|XP_001881777.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643132|gb|EDR07385.1| predicted protein [Laccaria bicolor S238N-H82] Length = 371 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 53/311 (17%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 G++A FL+ + + + L + S +L G I+ +I+K D F + + +R Sbjct: 61 RGQTATEFLEWLTPSSLTALSPYTSTLSVLLNENGGIIDDTIITKHAPDAFYVVTNAGRR 120 Query: 75 DS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---------------TFSNSSF 115 D KL + + V +E+ G++ TF S+F Sbjct: 121 DVDLPWFTKKLEEWNAKGKVEMEVLEDWGLLALQGPAAATYLQALTSFDLRLLTFGKSAF 180 Query: 116 IDER---------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 + V + + + + LR+ G+ Sbjct: 181 VPIEGFNLHVARGGYTGEDGFEISIPPSQTVEVAKLLSKTPVQLTGLGARDSLRLEAGMC 240 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D T P +A + + G + G +IG E V + R+R ++ Sbjct: 241 LYGHDL-DETTSPIEAGLSWVIGKDRKEAGDFIGAEGVRQHLKDGPPRRRVGLVVEGAPA 299 Query: 214 PPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKA--- 266 E+G + + +L A+ + H + + V R KA Sbjct: 300 REGAKIFTPSGEELGIVTSGIPSPSLQKNIAMGYVKSGSHKKGTEVEVEVRNKRRKAVVT 359 Query: 267 ----SFPHWYK 273 P++++ Sbjct: 360 PMPFIKPNYWR 370 >gi|291333949|gb|ADD93627.1| probable sarcosine dehydrogenase protein [uncultured marine bacterium MedDCM-OCT-S04-C448] Length = 446 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 50/264 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ S ++ G A+ LQ + + + P + L +G I IS+ E+ F Sbjct: 127 TSFSKFRISGPGALDLLQYLTVSKIDK-PIGKIIYTQFLNSRGGIEADLTISRTGEEEFY 185 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT---------------- 109 + + + + R V+I+ V++ H Sbjct: 186 MVTGSAFGVHDRSWIQKHSPRDGSVVIDELTEEFGVINLCGPHARDVLQNVTDDDISNEN 245 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKTY-------- 144 SSF D R + V R E +A Y Sbjct: 246 LPFSSFADIRVAGHPVRAMRIGYVGELGWEMHTGRENMPAVYRALAEAGSKYDIADVGYR 305 Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ G + ++D P P +A + +++ KG +IG++ + I+ RK Sbjct: 306 AIDSLRMEKGYLYWSSDISPD-YNPFEAGLGFR--VNMKKGDFIGRDALISIREM-EDRK 361 Query: 203 RPMIITGTDDLPPSGS-PILTDDI 225 + T +P GS PI+ + Sbjct: 362 KIAYFTLEKYMPVYGSEPIMREGR 385 >gi|157877272|ref|XP_001686963.1| aminomethyltransferase, mitochondrial precursor [Leishmania major strain Friedlin] gi|68130038|emb|CAJ09346.1| putative glycine synthase [Leishmania major strain Friedlin] Length = 394 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G FL+ + D+ + + + QG I +++K+ D L ++ Sbjct: 61 EVRGADRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTKMA-DHLFLVLNAG 119 Query: 73 KRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFIDE--------- 118 ++ + + LR +++ P++ +++ + S F+D+ Sbjct: 120 CKEKDVAHME-SVLRESAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPGMGFMQC 178 Query: 119 --------------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151 R N I + + LR+ Sbjct: 179 RQRVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMSRKAEMIGLGARDSLRLEA 238 Query: 152 GIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMII 207 G+ + I P A M +++ + +G +IG E + ++ + + + + + Sbjct: 239 GLNLYGHELT-EDINPVAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGL 297 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263 T + + I +G + L AI +D+ + L V G R Sbjct: 298 VSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRR 357 Query: 264 VKASF 268 V A Sbjct: 358 VAAVV 362 >gi|260905974|ref|ZP_05914296.1| sarcosine oxidase alpha subunit [Brevibacterium linens BL2] Length = 981 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 88/286 (30%), Gaps = 64/286 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAII-TADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S I++ G A FL I T L R + P G + + ++ +D + Sbjct: 644 STLGKIEIRGTDAGAFL-GQIYTNGFAKLKVGKGRYGLMCKPDGMVFDDGVTLRVADDRY 702 Query: 66 ILEIDRSKRDSLIDKL---------LFYKLRSNVI-----------------------IE 93 + ++++ L + ++V ++ Sbjct: 703 YMTTTTGGAATVLEWLEEWHQTEWPELDVVFTSVTEEWSTVAVAGPKSREVIAKLAPHLD 762 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY-- 144 + + + + R S + L N E +A + Sbjct: 763 VSNEAFEFMGFRETTLAGGIPARICRISFSGELAFEINVENFYGLAVWEAVAEAGAEFDI 822 Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 H LR G + D T+ P DA M+ + +S K +IG+ SRI Sbjct: 823 TPYGTETMHVLRAEKGFIIVGQD-TDGTVTPQDAGMEWI--VSKLKD-FIGKRSYSRIDT 878 Query: 197 RNIIRKRP---MIITGTDDLPP------SGSPILTDDIEIGTLGVV 233 RK + + GT L SG+P+ + + +G V Sbjct: 879 AREDRKHLVGVLPVDGTTRLAEGAQLITSGTPVTPEAGPVPMIGHV 924 >gi|254513007|ref|ZP_05125073.1| sarcosine oxidase alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221533006|gb|EEE36001.1| sarcosine oxidase alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 956 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 97/317 (30%), Gaps = 64/317 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G+ FL + + + +L R +L+ G IL + +++E +++ Sbjct: 632 ELKGRDVPKFLDFLYSNVMSSLKPGDGRYGLMLSDDGLILDDGVAFRLDEHRWLISTSTG 691 Query: 73 KRDSL---IDKLL-------------------------------FYKL------------ 86 D++ + KLL L Sbjct: 692 HADAVNQHMKKLLQTEFPGWQVMITTVTSQWNNATICGPRARDVMQALGTDINLSPKAFP 751 Query: 87 ---RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 + + P V +S+ E +F + ++ D ++ + Sbjct: 752 FMSFRDGTVAGLPARVVRVSFTGELSFEVNVAPRHMATLWDKVMEAGEPFGILPVGSEAS 811 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 H LR+ G + + + T+ +D M +S K Y+G+ V + R+ Sbjct: 812 -HVLRVEKGFLSLGHE-VDGTVDAYDLGMGW--AMSQKKPDYLGKRSVQLRRQSGHPRRA 867 Query: 204 PMIITGTDD--LPPSGSPILTDDIEIGTLGVVVG---------KKALAIARIDKVDHAIK 252 + + D P G+P+ T G++ LA+ Sbjct: 868 LVGVLPEDPNRQIPEGAPLTPGGRREATEGLITACVWSVMNDRWVGLALLENGHARQGET 927 Query: 253 KGMALTVHGVRVKASFP 269 + L + V+ + P Sbjct: 928 AHVRLKDGVIPVRVTKP 944 >gi|33862243|ref|NP_893804.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|59797840|sp|Q7TU18|GCST_PROMP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33634461|emb|CAE20146.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 370 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 94/305 (30%), Gaps = 52/305 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63 S+ I + G + ++Q ++ + + +L +G I+ +I + EED Sbjct: 51 SHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLMLNEKGGIIDDLIIYDLGQQEED 110 Query: 64 --TFILEIDRSKRDSLIDKLL------------------FYKLRSNVIIEI------QPI 97 L ++ S+ + + + L+ ++ I Sbjct: 111 ISEIFLIVNASRYQTDFSWIKNNLNTNNISISNAKKDKVLFALQGKNSFKLFEEWIKSSI 170 Query: 98 NGVVLSWNQEHTFSNSSFIDE-RFSIADVLLHRTWGHNEKIASDIKTY------------ 144 + + + F + S ++ FS + I + Sbjct: 171 SHIPYFGCEYKIFKHISSKEKIFFSKTGYTGENGLEILLSAKAAINLWDFLVSKNIKPCG 230 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D T P++A + L + + G+E + + I Sbjct: 231 LGARDTLRLEAGMHLYGQDL-NETTTPYEAGLGWLVHLENNHD-FFGREFLEKQSRFGIN 288 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 +K + + G + D IGT+ KA+A A I + + Sbjct: 289 KKLVGLNIEGRAIGRKGCEVFKDGENIGTITSGSWSPTKQKAIAFAYIQNSYATLNNVVE 348 Query: 257 LTVHG 261 + + G Sbjct: 349 ILIRG 353 >gi|113971661|ref|YP_735454.1| glycine cleavage system aminomethyltransferase T [Shewanella sp. MR-4] gi|123130080|sp|Q0HEX0|GCST_SHESM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|113886345|gb|ABI40397.1| glycine cleavage system T protein [Shewanella sp. MR-4] Length = 364 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L I+ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + R+ + + +V + +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159 >gi|305681169|ref|ZP_07403976.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266] gi|305659374|gb|EFM48874.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266] Length = 369 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 2/107 (1%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A FL A+I+ + + A+ S I+ G I+ + ++ E+ Sbjct: 51 LSHMGEIRVTGPDAGAFLDYALISH-LSIIKVGKAKYSMIVNEDGHIIDDLITYRLGENE 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 F++ + +++ + + +V + + + +++ + + Sbjct: 110 FLVVPNAGNAETVFQAFVDRAAKFDVELVNESTDTALIAVQGPNAEA 156 >gi|104784072|ref|YP_610570.1| sarcosine oxidase (subunit alpha) oxidoreductase protein [Pseudomonas entomophila L48] gi|95113059|emb|CAK17787.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Pseudomonas entomophila L48] Length = 1005 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 88/290 (30%), Gaps = 57/290 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNV-IIEIQ 95 + ++ L Y KL ++V I++ Sbjct: 731 MTTTTGGAARVLQWLELYHQTEWPDMKVYFTSVTDHWATMTLSGPNSRKLLADVSDIDLD 790 Query: 96 PINGVVLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144 +SW + SF E +V + G E+I K Y Sbjct: 791 KEGFPFMSWKEGLVGGVPARVFRISFTGELSYEINVQANYAMGVLEQIVEAGKKYNLTPY 850 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 H LR G + D ++ P D M G + +IG ++R Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMSWCVGRN-KPFSWIGLRGMNREDTVRE 908 Query: 200 IRKRPMIITGTDDLP--PSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 909 NRKQLVGLKPVDPNVWLPEGAQLVFDPKQPIPMDMVGHVTSSYAANSLGY 958 >gi|159028726|emb|CAO88198.1| gcvT [Microcystis aeruginosa PCC 7806] Length = 368 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 92/310 (29%), Gaps = 45/310 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + + LQ ++ +++ L A+ S +L P+G I+ + E + Sbjct: 58 SHMGKFILTGDNLVQSLQTLVPSNLARLKAGKAQYSVLLNPEGGIIDDIIFYYQSESQGV 117 Query: 67 LEIDRSKRDSLIDKL----------LFYKLRSNVIIEIQPINGV---------------V 101 L ++ S D + + L R V+I +Q + Sbjct: 118 LIVNASTTDKDREWILGNLEGSGVKLKDLSRERVLIALQGPKAATILQPLIGEKLSDFGL 177 Query: 102 LSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 + + F FI L + + + LR+ Sbjct: 178 FNHWESQLFGEKVFIARTGYTGEDGFEIMAPPEIGQQLWTEFLNLGVTPCGLGARDTLRL 237 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 + D ST P +A ++ L + KG +IG+ V+ + + R + Sbjct: 238 EAALALYGQDIDDSTS-PLEAGLNWLVHLP-EKGDFIGRNVLEDQKLNGVNRLLVGLQMS 295 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263 + P++ +G + ALA + + Sbjct: 296 GKHIARHDYPVVFAGEVVGKVTSGTLSPTLNTAIALAYLPTPFASIGQAIEVEIRGSTYP 355 Query: 264 VKASFPHWYK 273 +YK Sbjct: 356 ATVVKKPFYK 365 >gi|117921938|ref|YP_871130.1| glycine cleavage system aminomethyltransferase T [Shewanella sp. ANA-3] gi|166221571|sp|A0L105|GCST_SHESA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|117614270|gb|ABK49724.1| glycine cleavage system T protein [Shewanella sp. ANA-3] Length = 364 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 56/165 (33%), Gaps = 3/165 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L I+ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124 + ++ + R+ + + +V + +P ++ + + F ++ + + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSADQNAAIE 169 Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168 + + Y E+ + + + L + Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEVGYEIIVPETEAEALWQALLDQ 214 >gi|325106087|ref|YP_004275741.1| glycine cleavage system T protein [Pedobacter saltans DSM 12145] gi|324974935|gb|ADY53919.1| glycine cleavage system T protein [Pedobacter saltans DSM 12145] Length = 360 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 92/301 (30%), Gaps = 50/301 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A+ +Q I D L + S G ++ L+ +I+E T++L ++ S Sbjct: 56 LKGEKALDLIQKISANDASKLFDGKIQYSYFPNENGGVIDDLLVYRIDEKTYMLVVNASN 115 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD--------- 124 + D + + +I+I ++ + +S D + Sbjct: 116 IEKDWDWIQKHNTEGVELIDISDRTSLLAVQGPNAAKALASLTDIELENMEYYTFKKGVF 175 Query: 125 ---------VLLHRTWGHNE---KIASDIKTY--------------------HELRINHG 152 + G E + LR+ G Sbjct: 176 AGIPNVLISATGYTGAGGFEIYFDAVHSETIWDTIFEAGKPYGIQPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + TK ++ E + + + + RK Sbjct: 236 FCLYGNDI-DETTCPIEAGLGWV--TKFTKD-FVNSESLKVRKEQGVERKLVGFEMVERG 291 Query: 213 LPPSGSPILTD-DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +P G I+ + D IG + KA+ + + K + + + ++KA Sbjct: 292 IPRHGYEIVDEHDQTIGVVTSGTQSPSLQKAIGLGYVSKAFAKADSDIYIKIRDKKIKAK 351 Query: 268 F 268 Sbjct: 352 V 352 >gi|3415128|gb|AAC31611.1| aminomethyltransferase [Bartonella grahamii] Length = 189 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL D L +R + +L Q IL +I+++EE F+ Sbjct: 35 SHMKLIAVEGAQAVEFLSYAFPIDAAALKIGHSRYNYLLNGQAGILDDLIITRLEESRFM 94 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEH 108 L + + +L R+ V E Q + V+L+ Sbjct: 95 LVANAGNAQADFVELEK---RA-VDFECQVIALERVLLALQGPE 134 >gi|32474910|ref|NP_867904.1| aminotransferase-glycine cleavage system T protein [Rhodopirellula baltica SH 1] gi|32445450|emb|CAD75451.1| probable aminotransferase-glycine cleavage system T protein [Rhodopirellula baltica SH 1] Length = 388 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 55/306 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63 S+ ++ G A FL ++T V + R + +G +L L+S E Sbjct: 67 SHMGRLRFDGDHAAEFLDHVLTRRVTDMVPGQVRYGMVCNAEGGVLDDVLVSFLQTPSER 126 Query: 64 TF-ILEIDRSKRDSLIDKLLFY------KLRSN-----VIIEIQPINGVVLSWNQEHTFS 111 F +L ++ S R+ ++ + S+ +I IQ + + Sbjct: 127 RFHLLVVNASNREKILKWFEPHLADFPTVTMSDRTELTAMIAIQGPMAIEVCKKLFSIDP 186 Query: 112 N-----SSFIDERFSIADVL-------------------LHRTW-------GHNEKIASD 140 + ++FI ++F ++ HR W + + Sbjct: 187 SRLKNYNAFITDQFKKPVIVSRTGYTGEDGLELIVRAEEAHRVWENVLLAGREAGFVPAG 246 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + LR+ G+ + TI P A + G +L +IG++ + + + Sbjct: 247 LGARDTLRMEAGMPLYGHEL-DETIDPITAGLKF--GCNLKDRHFIGEDALRAVAEQGPT 303 Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 R R ++ G +L D +IG + L A+A ID HA Sbjct: 304 RCRIGLLPTGKRPAREGCDVLNADGAKIGQVTSGGPSPTLGVPIAMATID-AKHAKDPSF 362 Query: 256 ALTVHG 261 + + G Sbjct: 363 QIDIRG 368 >gi|225444472|ref|XP_002272701.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 408 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++ Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVK 139 Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82 ++ L ++ ++ L Sbjct: 140 DNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199 Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + +I ING + E F S + +A +L ++ G Sbjct: 200 KEDL-SKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 258 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D + P +A + G +G ++G EV+ + Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHVTPVEAGLTWAIGKRRRAEGGFLGAEVILK 315 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 +R + + S S I D IG + Sbjct: 316 QLEEGPSVRRVGFFS-SGPPARSHSEIQDDKGNNIGEITS 354 >gi|149202465|ref|ZP_01879437.1| putative aminomethyltransferase protein [Roseovarius sp. TM1035] gi|149143747|gb|EDM31781.1| putative aminomethyltransferase protein [Roseovarius sp. TM1035] Length = 789 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G + Q + T D+ LP +A+ P G ++ + ++ +D F Sbjct: 459 LSALRKFEITGPDSEALCQYVFTRDIKKLPVGGVVYTAMCYPHGGMIDDGTVFRLGQDNF 518 >gi|87300369|gb|ABD37371.1| GcvT [Shigella flexneri] gi|87300371|gb|ABD37372.1| GcvT [Shigella flexneri] gi|87300373|gb|ABD37373.1| GcvT [Shigella flexneri] gi|87300377|gb|ABD37375.1| GcvT [Shigella flexneri] Length = 138 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F Sbjct: 49 SHMTIVDLRGSRTWEFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108 Query: 66 ILEIDRSKRDSLIDKLLFYK 85 L ++ + R+ + + + Sbjct: 109 RLVVNSATREKDLSWITQHA 128 >gi|290955273|ref|YP_003486455.1| sarcosine oxidase subunit alpha [Streptomyces scabiei 87.22] gi|260644799|emb|CBG67884.1| putative sarcosine oxidase alpha subunit [Streptomyces scabiei 87.22] Length = 1071 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 87/291 (29%), Gaps = 60/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL + R + P G + + ++ +D ++ Sbjct: 737 STLGKIDVQGPDAGVFLDLLYTNMMSTLKVGMIRYGVMCRPDGMVFDDGTVIRVAQDRYL 796 Query: 67 LEIDRSKRDSLIDK-----------LLFY-----KLRSNVIIEIQPINGVVLSWNQEHTF 110 + +++D L + + + V + V+ S E Sbjct: 797 VTTTTGNAATVLDWMEEWLQTEWPELKVHCTSVTEQWATVALVGPKSREVIGSLAPELAV 856 Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 SN F I+ R + N + + Sbjct: 857 SNEDFPFMAWRGTTVAGIEARVCRISFSGELAYEINVSPWEALTLWEALYEAGAPYGITP 916 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G D T+ P D M + +S K ++G+ +R Sbjct: 917 YGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSWV--VSKKKSDFVGKRSYTRPDTVR 973 Query: 199 IIRKRPMIITGTD--DLPPSGSPILTDDI-------EIGTLGVVVGKKALA 240 RK + + D D P G+ ++ D + +G + AL Sbjct: 974 PDRKHLVGLLPEDPGDFLPEGTHLVADSVLPAPPVPMLGHVTSSYRSAALG 1024 >gi|217072060|gb|ACJ84390.1| unknown [Medicago truncatula] Length = 228 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK A+ FL+ ++ ADV L + +G + +I+K+ + L ++ Sbjct: 89 LSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDHHIYLVVNA 148 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 149 GCRDKDLAHI 158 >gi|114794036|pdb|2GAG|A Chain A, Heteroteterameric Sarcosine: Structure Of A Diflavin Metaloenzyme At 1.85 A Resolution gi|63146666|gb|AAY34152.1| heterotetrameric sarcosine oxidase alpha-subunit [Stenotrophomonas maltophilia] Length = 965 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ GK A FL I T L + R + G I + ++ ED F+L Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFLLHTTT 694 Query: 72 SKRDSLIDKL 81 ++D L Sbjct: 695 GGAADVLDWL 704 >gi|284991323|ref|YP_003409877.1| glycine cleavage T protein (aminomethyl transferase) [Geodermatophilus obscurus DSM 43160] gi|284064568|gb|ADB75506.1| glycine cleavage T protein (aminomethyl transferase) [Geodermatophilus obscurus DSM 43160] Length = 821 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 52/268 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 ++V G A+ LQ + T ++ + L G + ++++ E F Sbjct: 509 LEVSGPGALALLQRLTTGEMDK-SVGAVTYALALDEAGGVRSDLTVARLGEQLFQVGANG 567 Query: 67 -LEIDRSKRDS---------------------------LIDKLL---------FYKLRSN 89 L+ D R++ L+ ++ Y R+ Sbjct: 568 PLDHDLLLREAPDDGSVQVRDVTGGTCCIGLWGPRARDLVQRVSADDFTNGGLKY-FRAK 626 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + LS+ E + + D + DVL R IA+ ++ LR Sbjct: 627 RARIGGVPVTAMRLSYVGELGWEIYTSADNGQRLWDVL-WRAGQDLGVIAAGRAAFNSLR 685 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G D P++A + + K Y+GQE ++ + + + +R +T Sbjct: 686 LEKGYRAWGHDMTTEHD-PYEAGLGF--AVRKQKQGYVGQEALA-GRSDDTVSRRLSCLT 741 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234 D + P+ D G + Sbjct: 742 IDDGRSVVLGHEPVYVDGRPAGYVTSAA 769 >gi|126462115|ref|YP_001043229.1| sarcosine oxidase alpha subunit family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103779|gb|ABN76457.1| sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides ATCC 17029] Length = 993 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP R + G ++ ++ ++ ED+++ Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95 D + + + + V I ++ Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139 + W E T + R S + L + + + Sbjct: 780 KEALPFMHWA-EGTLAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K +IG+ + R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895 Query: 199 IIRKRPMII-TGTDDLPPSGS 218 R + + + T + P G+ Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916 >gi|195578305|ref|XP_002079006.1| GD23726 [Drosophila simulans] gi|194191015|gb|EDX04591.1| GD23726 [Drosophila simulans] Length = 405 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 94/276 (34%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 141 MKEQDMGIIKAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 SSFI I +V + R E + + Sbjct: 199 QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESSQAQKLTESLLESGVLKLAGLGA 258 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D S P +A + L ++ + + G +V+ R + Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILRQLKEGVS 315 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I + ++G + Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGKQVGQVTSGC 351 >gi|327395075|dbj|BAK12497.1| aminomethyltransferase GcvT [Pantoea ananatis AJ13355] Length = 365 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ DV L A + +L ++ ++ ++E F Sbjct: 50 SHMTIVDLKGERTREFLRFLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMDETFF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119 L ++ + R+ + + + V + E + + + Q + + F D + Sbjct: 110 RLVVNSATREKDLAWIGEHAQGYGVALTERDDLALIAVQGPQAQQKAQTLFSDAQRQAVQ 169 Query: 120 -----------------------------FSIADVLL-HRTWGHNEKIASDIKTYHELRI 149 AD + + + + LR+ Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEAGYEIALPAADAVGFWQRLLSAGVKPAGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG--CYIGQEVVSRIQHRNIIRKRPMII 207 G+ + ++ P A M IS G +IG+E + + + K +I Sbjct: 230 EAGMNLYGQEM-DESVSPLAANMGWT--ISWEPGDRHFIGREALESQREKGT-EKLVGLI 285 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALT 258 + +G P+ D + G L V +A+AR+ + + Sbjct: 286 LTEKGVLRNGLPVRFTDQQ-GQLQQGVITSGSFSPTLGYSIALARV-PAGIGENAIVEIR 343 Query: 259 VHGVRVKASFP 269 + VK + P Sbjct: 344 NREMPVKVTKP 354 >gi|308178494|ref|YP_003917900.1| heterotetrameric sarcosine oxidase subunit alpha [Arthrobacter arilaitensis Re117] gi|307745957|emb|CBT76929.1| heterotetrameric sarcosine oxidase alpha-subunit [Arthrobacter arilaitensis Re117] Length = 965 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ GK A FL I T L + R + G I + ++ ED F+L Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFLLHTTT 694 Query: 72 SKRDSLIDKL 81 ++D L Sbjct: 695 GGAADVLDWL 704 >gi|70919599|ref|XP_733451.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56505261|emb|CAH87045.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 205 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 F + P D D N IS KGCYIGQEV++R +++ +I K Sbjct: 142 FNFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 184 >gi|149059060|gb|EDM10067.1| dimethylglycine dehydrogenase precursor, isoform CRA_b [Rattus norvegicus] Length = 805 Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 20/272 (7%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 F+L + + +R +EI+ I + ++ Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK- 182 + + SDI +RI++ + N D P +A +D I L K Sbjct: 643 SDDVFKFLQTKSLKISDIPV-TAIRISY--TEMNCD-----TNPLEAGLDYF--IKLNKP 692 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVG 235 + G++ + +I+ + + R+ + TD++ P G+ + IG + Sbjct: 693 ANFTGKQALKQIKAKGLKRRLVCLTLATDNVDPEGNESVWYKGKVIGNTTSGSYSYSIQK 752 Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 A A ++ + + + L Sbjct: 753 SLAFAYVPVELSEVGQQVEVELLGKNYPATII 784 >gi|157877283|ref|XP_001686964.1| aminomethyltransferase, mitochondrial precursor [Leishmania major strain Friedlin] gi|68130039|emb|CAJ09347.1| putative glycine synthase [Leishmania major strain Friedlin] Length = 377 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G FL+ + D+ + + + QG I +++K+ D L ++ Sbjct: 61 EVRGADRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTKMA-DHLFLVLNAG 119 Query: 73 KRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFIDE--------- 118 ++ + + LR +++ P++ +++ + S F+D+ Sbjct: 120 CKEKDVAHME-SVLRESAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPGMGFMQC 178 Query: 119 --------------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151 R N I + + LR+ Sbjct: 179 RQRVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMSRKAEMIGLGARDSLRLEA 238 Query: 152 GIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMII 207 G+ + I P A M +++ + +G +IG E + ++ + + + + + Sbjct: 239 GLNLYGHELT-EDINPVAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGL 297 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263 T + + I +G + L AI +D+ + L V G R Sbjct: 298 VSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRR 357 Query: 264 VKASF 268 V A Sbjct: 358 VAAVV 362 >gi|114769737|ref|ZP_01447347.1| sarcosine dehydrogenase [alpha proteobacterium HTCC2255] gi|114549442|gb|EAU52324.1| sarcosine dehydrogenase [alpha proteobacterium HTCC2255] Length = 848 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN + ++ G+ A FL ++T ++ L + +L GK++ F I+K + F+ Sbjct: 490 SNFAKYEISGEDAEIFLDYLMTNNMPKL--GQIILTPMLNENGKLIGDFTIAKEANNKFL 547 Query: 67 L 67 L Sbjct: 548 L 548 >gi|88856124|ref|ZP_01130785.1| aminomethyltransferase [marine actinobacterium PHSC20C1] gi|88814692|gb|EAR24553.1| aminomethyltransferase [marine actinobacterium PHSC20C1] Length = 385 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 101/317 (31%), Gaps = 63/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + I V G A FL + + + A+ S +L G I+ + ++ +D F+ Sbjct: 67 SHMAEIHVRGADAGAFLDYALAGKLSGIALAQAKYSLLLNEAGGIIDDLVTYRLADDHFL 126 Query: 67 LEIDR----SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------------- 106 + + + +L+++ + +V + + + +++ Sbjct: 127 VVANAGNRYAAASALMERASGF----DVAVTDESDDYALIAVQGPVSRAILETTAGLTDF 182 Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRTWGHNEK----------------- 136 TFS I R + H + Sbjct: 183 ATPLDELKYYRETAATFSGHDLIIGRTGYTGEDGFELYIHVDAATELWAALTVAGEPLGL 242 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + + + LR+ G+ + T FP A + + +S +G ++G+ + Sbjct: 243 VPAGLACRDTLRLEAGMPLYGHELNL-TTFPVQAGLGRVVALS-KEGDFVGRSAIEAGPD 300 Query: 197 RNIIRKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + + + D E+G + +A+A +D I Sbjct: 301 AGA--RVLVGLAAEGRRAGRADYTLFSGDAEVGVITSGALSPTLGHPIAMAYVDPDVSEI 358 Query: 252 KKGMALTVHGVRVKASF 268 + + V G R+ AS Sbjct: 359 GTELHIDVRGSRIAASV 375 >gi|154247116|ref|YP_001418074.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] gi|154161201|gb|ABS68417.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter autotrophicus Py2] Length = 376 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 98/302 (32%), Gaps = 50/302 (16%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 I V GK A+ FL ++TAD+ +P + ++I+ G ++ LI + F L Sbjct: 61 IINVGGKDALAFLNQLVTADITKVPAGRSAIASIVGDDGGLIDDVLIYVDGDGAFRLSHG 120 Query: 71 RSKRDSLIDKLL--FYKLRS---NVII---------------EIQPINGVVLSWNQEHT- 109 + + + F S +V I + G+ + T Sbjct: 121 GGALEDALPLVAEGFDVTFSRDNDVHILSLQGPKALDILAPHTPMDLKGLPYFGHGRTTL 180 Query: 110 ------FSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + ER A L + + + ++ L I V+ Sbjct: 181 FGVPVSLARGGYSAERGYEVFCAAKDAVALWDKILEAGKPFGAMPVSWDCLDIVR--VEG 238 Query: 157 NT-----DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D P + LMD + L+K + G+ + + + R + Sbjct: 239 ALLFFPFDMPHKDTTPFEVLMDWS--VDLSKPDFRGK--AALLARKGTERTHQAGLEVLA 294 Query: 212 DLP-PSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G+ I D E+G + + +LA+ + A+ G+++ +A Sbjct: 295 AKAITPGAKIFKDGEEVGVVNSTTYSRHLMKSLALVSLRPDVTALGTGVSVVDGEESFEA 354 Query: 267 SF 268 + Sbjct: 355 NV 356 >gi|311742853|ref|ZP_07716661.1| glycine cleavage system T protein [Aeromicrobium marinum DSM 15272] gi|311313533|gb|EFQ83442.1| glycine cleavage system T protein [Aeromicrobium marinum DSM 15272] Length = 425 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 47/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ +T D+ + A+ + G + + Sbjct: 112 SHLGKAVVRGTGAADFVNECLTNDLGRIGPGQAQYTLCCADDGGTVDDLIAYLRSPFEVF 171 Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 L + + ++ +L ++ + + ++ + VV + + SF Sbjct: 172 LIPNAANTAEVVARLRAEAPEGVEVVDQHRDFAVLAVQGTLSDEVVSALGLPTDHAYMSF 231 Query: 116 IDERFSIADVLLHRTWGHNEK-------IASDIKTYHE--------------------LR 148 D R + DV + RT E+ + + + LR Sbjct: 232 ADARIAGHDVTVCRTGYTGERGYELVVPTDAAVDVWDAVLAAGRPHGIRACGLGARDTLR 291 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G + + I P A + +K + G+E + R + +R ++ Sbjct: 292 TEMGYPLHGHEL-SAEISPVMARAGW--AVGWSKPRFWGREALQRQREEKTVRTLRGLLA 348 Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVVGK----KALAIARIDK-VDHAIKKGMALTVHGV 262 +P G + D +G + + +A+A ++ V+ G+ + Sbjct: 349 QGRGIPRPGMVVRNGDGAVVGEVTSGTFSPTLRQGVALALLEPGVEVGASVGVEVRTRQE 408 Query: 263 RVKASFPH 270 P Sbjct: 409 PFTVVAPP 416 >gi|149277085|ref|ZP_01883227.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp. BAL39] gi|149231962|gb|EDM37339.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp. BAL39] Length = 359 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 99/301 (32%), Gaps = 50/301 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G++A+ +Q + + D L + S + G I+ L+ +I+E T++L ++ S Sbjct: 56 LKGENALDLIQRVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRIDELTYMLVVNASN 115 Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115 + + + Y L + +Q + V L+ + ++F+ +F Sbjct: 116 IEKDWNWIQKYNDKGVEMHNISDKTSLLAIQGPKAAEALQSLTEVDLASMEYYSFTKGTF 175 Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152 + + G E + + LR+ G Sbjct: 176 AGVGNVVISATGYTGAGGFEIYFDNEHANEIWEAIFAAGAALNIKPIGLGARDTLRLEMG 235 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D T P +A + + +K + E + + + RK Sbjct: 236 FCLYGNDI-DDTTSPIEAGLGWI--TKFSK-VFTNSEALQAQKEAGVSRKLIGFEMIDRG 291 Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 +P I+ + IG + +KA+ + IDK + + + R+KA Sbjct: 292 IPRHDYEIVDAEGQVIGRVTSGTQAPSLQKAIGMGYIDKAFAKEGTEIFINIRNSRIKAK 351 Query: 268 F 268 Sbjct: 352 V 352 >gi|167648342|ref|YP_001686005.1| glycine cleavage system T protein [Caulobacter sp. K31] gi|167350772|gb|ABZ73507.1| glycine cleavage system T protein [Caulobacter sp. K31] Length = 370 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 90/264 (34%), Gaps = 40/264 (15%) Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ ++ G + A F + +++AD L R + +L QG ++ + ++ ++D Sbjct: 55 SHMGQARLRGANPAKSF-EKLVSADYQGLKPGKQRYAVLLNDQGGVIDDLMTARPDDDGL 113 Query: 66 ILEIDRSKRDS----LIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + ++ + +D+ + L +L ++ +Q + + F+D Sbjct: 114 FIVVNGACKDNDYAIIAKALEGEATVERLEDRALLALQGPEAAAVLAAHVPEAAGMVFMD 173 Query: 118 ERFSIA--------------------------DVLLHRTWGHNEKIAS-DIKTYHELRIN 150 A + T +E++ + + LR+ Sbjct: 174 TAALTAFGTDAIISRSGYTGEDGYEISVPASEAARIWNTLLQDERVKAIGLGARDSLRLE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T+ P +A M G S + G + G + + ++ R R + Sbjct: 234 AGLPLYGHDM-DETVSPIEAGMPFAVGKSRREAGDFPGAARILKELAGDLKRVRVNLKVL 292 Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232 G+ I + +G + Sbjct: 293 EGAPAREGAEIADETGAVVGVVTS 316 >gi|209542714|ref|YP_002274943.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530391|gb|ACI50328.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus PAl 5] Length = 377 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 56/315 (17%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+ ++ AD+L+L R + + QG I+ ++S++ Sbjct: 54 SHMGQIRLRARSGRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSRVG 113 Query: 62 EDTFILEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 DT +L ++ + +D+ + + L +I +Q ++ Sbjct: 114 -DTLLLVVNAACKDADLAHITAALDDACIVESLPDRALIALQGPLAGAALARLAPASADM 172 Query: 114 SFID-ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHE 146 F+D F +A V + E + Sbjct: 173 RFMDVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDS 232 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ +D P T P + ++ G + G +++ R Sbjct: 233 LRLEAGLCLYGSDIGPDTT-PVEGALEWSIQKSRRAGGARAGGFPGADIILARIQDGAAR 291 Query: 202 KRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHAIK 252 +R I G+ + D +G + A+ I Sbjct: 292 RRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGAPVAMGYVDIAHAATGTA 351 Query: 253 KGMALTVHGVRVKAS 267 L V V + Sbjct: 352 LFAELRGKYVPVTVA 366 >gi|284054077|ref|ZP_06384287.1| glycine cleavage system aminomethyltransferase T [Arthrospira platensis str. Paraca] gi|291572053|dbj|BAI94325.1| putative glycine cleavage T-protein [Arthrospira platensis NIES-39] Length = 370 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 83/294 (28%), Gaps = 55/294 (18%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLIS------KIEEDTFILEIDRSKRDS----LIDK 80 + L A+ + +L G IL + ++ ++ + + ++ Sbjct: 77 LSRLQPGQAQYTVLLNSSGGILDDVIFYYQGLDPATGNQRGMMIVNAATKSRDKAWVVAH 136 Query: 81 LLFYKL------RSNVIIEIQ--------------PINGVVLSWNQEHTFSNSSFIDERF 120 L + RS V+I +Q ++ V + E T R Sbjct: 137 LEGTGVALEDLSRSQVLIAVQGPQAEAVLGPLVEADLSAVANFGHIETTLLGKPAFIART 196 Query: 121 -------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 V L R + LR+ + D T P Sbjct: 197 GYTGEDGFEVMVNPHTGVNLFRHLIEVGATPCGLGARDTLRLEAAMALYGQDIDTHTT-P 255 Query: 168 HDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDI 225 +A + L I KG +IG+E + Q + +R + + + G P+ Sbjct: 256 LEAGLGWL--IHWDEKGDFIGRESL-ESQKSGGLSRRLVGLEMQGRYIARHGYPVKAGGE 312 Query: 226 EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +G + ALA ++ + + + +Y+ Sbjct: 313 VVGEITSGTMSPTLEKAIALAYVPVELAKIGRQVEVEIRNKIYPATVVKRPFYR 366 >gi|195161607|ref|XP_002021654.1| GL26626 [Drosophila persimilis] gi|194103454|gb|EDW25497.1| GL26626 [Drosophila persimilis] Length = 410 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 57/310 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK A L+++ TAD+L P + QG IL +++K+ E + + + Sbjct: 87 VRGKDAAACLESVCTADILGTPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNAAM 146 Query: 74 RDS----LIDKLLFYKLR-SNVIIE-IQPINGVVLSWNQEHTFSN--------------- 112 + + +K + +V +E + P + +++ + Sbjct: 147 KQQDMNIISAAASSFKSQGRDVSVEFLTPSDQSLIAVQGPRVAAELAKLLAPTTALDQLY 206 Query: 113 --SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKTYHE 146 SF+ I +V + R GH + + + Sbjct: 207 FMQSFVGTLAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDS 266 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ +D T P +A + L + G +VV Q + +++R + Sbjct: 267 LRLEAGLCLYGSDIDAQTT-PVEAALAWLVAKRRRAARDFPGADVVL-SQLKGGVQRRRV 324 Query: 206 IITGTDDLPPS---GSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258 + PP G I + ++G + + +A+ + + A + L Sbjct: 325 GLQMLGAKPPPARSGVAIFSGGQQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELK 384 Query: 259 VHGVRVKASF 268 V +A Sbjct: 385 VRDKVYEAEI 394 >gi|217974770|ref|YP_002359521.1| glycine cleavage system aminomethyltransferase T [Shewanella baltica OS223] gi|254797880|sp|B8EB47|GCST_SHEB2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|217499905|gb|ACK48098.1| glycine cleavage system T protein [Shewanella baltica OS223] Length = 364 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + ++ + R+ + + +V + +P ++ ++ + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160 >gi|87300433|gb|ABD37403.1| GcvT [Shigella dysenteriae] Length = 138 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G FL+ ++ DV L A S +L G ++ ++ E+ F Sbjct: 49 SHMTIVNLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTENFF 108 Query: 66 ILEIDRSKRD 75 L ++ + R+ Sbjct: 109 RLVVNSATRE 118 >gi|126172866|ref|YP_001049015.1| glycine cleavage system aminomethyltransferase T [Shewanella baltica OS155] gi|166221567|sp|A3D083|GCST_SHEB5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|125996071|gb|ABN60146.1| glycine cleavage system T protein [Shewanella baltica OS155] Length = 364 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + ++ + R+ + + +V + +P ++ ++ + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160 >gi|240851020|ref|YP_002972420.1| glycine cleavage system protein T [Bartonella grahamii as4aup] gi|240268143|gb|ACS51731.1| glycine cleavage system protein T [Bartonella grahamii as4aup] Length = 370 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 98/305 (32%), Gaps = 49/305 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL D L +R + +L Q IL +I+++EE F+ Sbjct: 59 SHMKLIAVEGTQAVEFLSYAFPIDAAALKIGHSRYNYLLNEQAGILDDLIITRLEESRFM 118 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSW-------------------- 104 L + + +L R+ V E Q + V+L+ Sbjct: 119 LVANAGNAQADFVELEK---RA-VDFECQVIALERVLLALQGPEAAAVLADADLPGNELF 174 Query: 105 -------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150 Q+ + S + E + + EK SD + LR+ Sbjct: 175 FMQGFEPQQDWFITRSGYTGEDGFEIALPIGHAHMLAEKFLSDSRVEWIGLAARDSLRLE 234 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D P T P DA + S+ K + G + + R R + Sbjct: 235 AGLCLHGNDITPDTT-PIDAALTWAVPKSVREKAQFYGAKAFLEALQKGPARCRVGLKPQ 293 Query: 210 TDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262 T +G+ +L D EIG + G A+ +D + L + Sbjct: 294 TRQPIRAGAVLLDDQGNEIGVVTSGGFGPSFDGPVAMGYVPVDCKVEGTQVFTELRGKKI 353 Query: 263 RVKAS 267 + Sbjct: 354 VLSVH 358 >gi|330845252|ref|XP_003294508.1| aminomethyltransferase [Dictyostelium purpureum] gi|325075021|gb|EGC28969.1| aminomethyltransferase [Dictyostelium purpureum] Length = 404 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 102/284 (35%), Gaps = 58/284 (20%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ ++ GK + F ++I+ AD+ +L ++ S T G I+ +I+ Sbjct: 73 SLFDVSHMGQLRFHGKDRVKFFESIVVADLQSLAAGHSKLSVFTTENGGIIDDTMITNAG 132 Query: 62 EDTFILEIDRSKRDSLIDKL-LFYKLRS----NVIIEIQPINGVVL-------------- 102 D+ + ++ D I + KL +V +E+ ++ Sbjct: 133 -DSLYVVVNAGCADKDIAHINQQMKLFKEKGNDVSMELLEDLSLIAIQGPATEVILQKMV 191 Query: 103 ---------------------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 + E F S ++ +A++LL + ++E Sbjct: 192 KQDITNMEFMTQRVMNIAGIDCIVTRCGYTGEDGFEISVPSNKAVQLAEILLSTSNANSE 251 Query: 136 K--IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEV 190 + + LR+ G+ D I P +A ++ L IS + G + G Sbjct: 252 HGIKPAGLGARDSLRLEAGLCLYGHDL-NDQISPIEASLNWL--ISKRRREEGGFPGASK 308 Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232 + + + +KR +I GS IL +++ EIG + Sbjct: 309 IQQQLKDGVSQKRVGLIV-EGSPAREGSLILDPSNNQEIGRVTS 351 >gi|289806992|ref|ZP_06537621.1| putative global regulator [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 49 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 17/31 (54%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV 31 ++ + L + + + G + ++Q +TADV Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADV 49 >gi|126737928|ref|ZP_01753658.1| sarcosine oxidase alpha subunit [Roseobacter sp. SK209-2-6] gi|126721321|gb|EBA18025.1| sarcosine oxidase alpha subunit [Roseobacter sp. SK209-2-6] Length = 990 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 69/213 (32%), Gaps = 19/213 (8%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 + +S+ I V G A FL I + L AR +L G ++ ++ Sbjct: 650 LGICDVSSLGKIAVQGPDASEFLNRIYSNAFAKLAVGKARYGIMLRDDGMVMDDGTTWRL 709 Query: 61 EEDTFILEIDRSKRDSLIDKL-LFYKLRS-----NVIIEIQPINGVVLSWNQEHTFSNSS 114 E+ F+L + ++ L +LR +V GV ++ + + Sbjct: 710 SENDFLLTTTTTGAGKVMVWLEELLQLRWPELEVHVTSVSDQWAGVSVAGPKSRAAIAAC 769 Query: 115 FIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV----DPNTDFLPST 164 D V R + + + I EL + + D L + Sbjct: 770 LTDPEMISAESLPFMGVRETRLKSGIKCLIARISFSGELAYELYVPANQGEAMMDLLWAA 829 Query: 165 IFPHD---ALMDLLNGISLTKGCYIGQEVVSRI 194 P ++ L + + KG G E+ R+ Sbjct: 830 SEPLGGCLYGLEALGTLRIEKGHVTGAELDGRV 862 >gi|187251759|ref|YP_001876241.1| glycine cleavage system T protein [Elusimicrobium minutum Pei191] gi|186971919|gb|ACC98904.1| Glycine cleavage system T protein [Elusimicrobium minutum Pei191] Length = 371 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 42/263 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G+ FL+ + + + + +L +G ++ + EE F+ Sbjct: 67 SHMGQLLMTGRDVHKFLEYVTSNKIKN-SPSQGTYTHVLNEKGGVVDDVVAFCKEEGKFL 125 Query: 67 LEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERF 120 + ++ + V+ ++ G+V E + RF Sbjct: 126 VVVNSATTHKDFKYFSKMTAGFDVVVEDLSSEFGMVAVQGPEAMSHAEKLVPGISELPRF 185 Query: 121 SIADV-------LLHRTWGHNE---------KIASDIKTY--------------HELRIN 150 +I +V L+ RT E K DI + LR+ Sbjct: 186 NIKEVVLFGQRCLITRTGYTGEDGLEIMAPHKAIVDIWNFFIDLGAAPCGLGARDVLRLE 245 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMIITG 209 G + D + + + L K ++ + ++++ + + I+ +TG Sbjct: 246 AGYLLYGVDVDDEHTSYEASCGWV---VKLDKPDFVAKAILAKQKEEGVKIKLTSFQLTG 302 Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232 +P + EIG+L Sbjct: 303 PG-VPREHCKVFFKGEEIGSLTS 324 >gi|307822834|ref|ZP_07653065.1| glycine cleavage system T protein [Methylobacter tundripaludum SV96] gi|307736438|gb|EFO07284.1| glycine cleavage system T protein [Methylobacter tundripaludum SV96] Length = 360 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 102/294 (34%), Gaps = 46/294 (15%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A+P L +I +D+ L + + + G I+ +I++I + ++ ++ + +D Sbjct: 60 GDDAVPELGQLIPSDISGLKSGDQKYTVLTNSDGGIMDDIIITRI-DTGLMIVVNAACKD 118 Query: 76 SLIDKL--------LFYKLRSNVIIEIQPINGV-----VLSWNQEHTF------------ 110 L F +L S + +Q + E +F Sbjct: 119 KDFKHLYSHLGGRCCFNELTSQALFALQGPAAASIMEKFSAQAAELSFMQACGTNIKGIK 178 Query: 111 ---SNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 S S + E A+ L ++ + LR+ G+ + Sbjct: 179 CNVSRSGYTGEDGFEISVGHHYAEQLARLLLAEDDVEPIGLAARDTLRLEAGLCLYGHEL 238 Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219 +I P +A + L I + G E +++++QH + R ++ + GS Sbjct: 239 -NESITPVEAGLQWL--IKKADNNFPGAEKILAQLQH-GSEKIRVGLLIDSKIPVREGSV 294 Query: 220 I-LTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268 I ++ I +G + L A+A +D + + V R+ + Sbjct: 295 ICNSEGIAVGYVTSGSFSPCLDQPIAMAMLDPYTVDLGSPLYTMVRDHRITVTL 348 >gi|160876905|ref|YP_001556221.1| glycine cleavage system aminomethyltransferase T [Shewanella baltica OS195] gi|189039319|sp|A9L332|GCST_SHEB9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|160862427|gb|ABX50961.1| glycine cleavage system T protein [Shewanella baltica OS195] gi|315269109|gb|ADT95962.1| glycine cleavage system T protein [Shewanella baltica OS678] Length = 364 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + ++ + R+ + + +V + +P ++ ++ + Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160 >gi|82701348|ref|YP_410914.1| glycine cleavage system aminomethyltransferase T [Nitrosospira multiformis ATCC 25196] gi|82409413|gb|ABB73522.1| aminomethyltransferase [Nitrosospira multiformis ATCC 25196] Length = 360 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G+SA FL+ ++ ++ L A S +L P G ++ +I + E F Sbjct: 49 SHMLAVDIEGESARAFLRQLVANNIDKLTQLGKALYSCMLNPDGGVIDDLIIYFLTESHF 108 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 109 RMVVNAGTAD 118 >gi|294083805|ref|YP_003550562.1| aminomethyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663377|gb|ADE38478.1| aminomethyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 377 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 88/308 (28%), Gaps = 57/308 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A + +T D+ L + + +L +GK + +I ++ ++F++ Sbjct: 59 VHVAGPHASHVIDRAVTRDIEKLRPGRSTYACMLNDEGKFIDDCVIYRMGPNSFMVVHGS 118 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------------- 117 + ++L +V + + ++D Sbjct: 119 GQG---HEQLTMAATGRDVSLRFDDNLHDISLQGPLAVEFLDKYVDSIRQLNYFNHTQTM 175 Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD---PNTDFLPSTIF 166 R + + + + T GI+ D L + + Sbjct: 176 LFDCPVMISRTGYSGERGYELFCRGQDAPKIWDTLVTEGAAMGIIPTRFTTLDLLRAESY 235 Query: 167 PHDALMDLLN----------------GISLT----KGCYIGQEVVSRIQHRNIIRKRPMI 206 D + G+ T K + G E ++ + R + Sbjct: 236 LLFFPYDNSDMYPFENEKHGDTLWELGLDFTVSPGKTGFRGCE--EHMRLKGKERFKIYG 293 Query: 207 ITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259 + P G+P++ D ++G + V + +A +D + + Sbjct: 294 VLLDGTEPADEGAPLMKDGKQVGIVTVGMYSTLNKHNVGIARMPVDCAVDGVAMSVKNAS 353 Query: 260 HGVRVKAS 267 + +A Sbjct: 354 GDIACQAH 361 >gi|324503230|gb|ADY41408.1| Dimethylglycine dehydrogenase [Ascaris suum] Length = 833 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 114/324 (35%), Gaps = 67/324 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + I+V G A FL I+T V L + +LT +G IL + ++ Sbjct: 499 IDLSWKGKIEVRGPDAEVFLDRILTNAVPPLAAITS--GLMLTRRGNILAPLKVFHHDQY 556 Query: 64 T--FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------- 106 FIL D + + + + +EI ++ + S Sbjct: 557 RTNFILLTDPERESRDLYWIQRAADEMKMNVEISAVSEYLASLALVGPHSREVLQELTKS 616 Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHEL-------- 147 + F + R S + RT ++ A +K Y+ + Sbjct: 617 DVSDEGFPQRTTKLLRLSNVPAIAARTSTSTGQLSFEFFHNRADTLKLYNAIMNEGKNYG 676 Query: 148 ------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 R+ HG + T P++ + L + L+K +IG+ V + Sbjct: 677 VVNFGQATLNMMRLEHGFKLWGRELTLDT-NPYECGLGHL--VDLSKKNFIGKAAVLELS 733 Query: 196 HRNIIRKRPM----IITGTDD--LPPSGSPIL---TDDIEIGTLG----VVVGKKALAIA 242 H+ RK+ + + G D P G ++ + IG + V + LA A Sbjct: 734 HKKWNRKQVLLTCDPLEGVQDWASVPKGMEVVRKQGAEERIGQITSGTYSVRLHRPLAYA 793 Query: 243 RIDKVDHAIKKGMALTVHGVRVKA 266 ++ D ++ + + + G+R+ A Sbjct: 794 WVN-ADISVNDALTVDIGGLRIGA 816 >gi|146302182|ref|YP_001196773.1| glycine cleavage system aminomethyltransferase T [Flavobacterium johnsoniae UW101] gi|146156600|gb|ABQ07454.1| aminomethyltransferase [Flavobacterium johnsoniae UW101] Length = 369 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 19/150 (12%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + GK A+ +Q I + D L + S + G I+ LI + E ++ Sbjct: 56 SHMGEILIQGKDALALIQKISSNDASKLFPGKIQYSCMPNKTGGIVDDLLIYMMSEKDYL 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L ++ S + + + T +N S I ++ L Sbjct: 116 LVVNASNIQ-----------------KDWDWISTIALDYLDLTITNLSDIISLLAVQGPL 158 Query: 127 LHRTWGHNEKIASDIKTYHELRIN--HGIV 154 ++ I + Y+ I GI Sbjct: 159 AAKSLQKLTSINLNEMKYYTFEIGEFAGIP 188 >gi|255727144|ref|XP_002548498.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240134422|gb|EER33977.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 394 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ GK+A LQ I D+ TLP S +L +G ++ +I+K ED F + + Sbjct: 72 KITGKNARKLLQKITPIDLDTLPVNTFSLSVLLNNEGGVIDDCIITKHGEDDFYMVTNAG 131 Query: 73 KRDSLIDKLL 82 RD I + Sbjct: 132 CRDKDIKFIK 141 >gi|119504062|ref|ZP_01626143.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] gi|119460065|gb|EAW41159.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] Length = 805 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + +CG A FL ++ + IA + L+ G+IL ++++ + Sbjct: 483 IDLTGFAKYDICGADAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 541 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120 F L S +D L ++ S V I GV+ + + D Sbjct: 542 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 600 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + W ++ I LRIN+ + + + P AL D + G Sbjct: 601 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 654 Query: 181 TKG 183 +G Sbjct: 655 DQG 657 >gi|326521632|dbj|BAK00392.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 413 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 90/277 (32%), Gaps = 48/277 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+ Sbjct: 85 SLFDVSHMCGLSLQGRQAIPFLESLVVADVAALKDGTGSLTVFTNDKGGAIDDSVVTKVN 144 Query: 62 EDTFILEIDRSKRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQEHTFSNSSFI 116 + L ++ RD + + + V + ++ + Sbjct: 145 DHHVYLVVNAGCRDKDLAHIGAHMEAFQKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 204 Query: 117 DERFSIA-------------DVLLHRTWGHNE---------KIASDIK------------ 142 E S L RT E + A D+ Sbjct: 205 KEDLSKMYFSDFKMIDINGSACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVR 264 Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQH 196 LR+ G+ D I P +A + G +G ++G EV+ + Q Sbjct: 265 LTGLGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGAEVILK-QL 322 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + + R + I P S S I++ IG + Sbjct: 323 KEGPKIRRVGIFSQGPPPRSHSEIVSGAGENIGEVTS 359 >gi|170782567|ref|YP_001710900.1| glycine cleavage system T protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157136|emb|CAQ02316.1| glycine cleavage system T protein [Clavibacter michiganensis subsp. sepedonicus] Length = 399 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 38/75 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + I V G+ A FL +++ + + A+ + +L P G I+ ++ + E++F+ Sbjct: 59 SHMAEIAVEGEGAAAFLDSVLAGKLSAIAEWQAKYTLLLDPSGGIVDDLIVYRTGEESFL 118 Query: 67 LEIDRSKRDSLIDKL 81 + + D +I L Sbjct: 119 VVANAGNHDPVIAVL 133 >gi|77463241|ref|YP_352745.1| putative sarcosine oxidase, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|77387659|gb|ABA78844.1| putative sarcosine oxidase, alpha subunit [Rhodobacter sphaeroides 2.4.1] Length = 993 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP R + G ++ ++ ++ ED+++ Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95 D + + + + V I ++ Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139 + W E T + R S + L + + + Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K +IG+ + R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895 Query: 199 IIRKRPMII-TGTDDLPPSGS 218 R + + + T + P G+ Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916 >gi|332558119|ref|ZP_08412441.1| sarcosine oxidase alpha subunit family protein [Rhodobacter sphaeroides WS8N] gi|332275831|gb|EGJ21146.1| sarcosine oxidase alpha subunit family protein [Rhodobacter sphaeroides WS8N] Length = 993 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP R + G ++ ++ ++ ED+++ Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95 D + + + + V I ++ Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139 + W E T + R S + L + + + Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K +IG+ + R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895 Query: 199 IIRKRPMII-TGTDDLPPSGS 218 R + + + T + P G+ Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916 >gi|254422458|ref|ZP_05036176.1| glycine cleavage system T protein [Synechococcus sp. PCC 7335] gi|196189947|gb|EDX84911.1| glycine cleavage system T protein [Synechococcus sp. PCC 7335] Length = 376 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G+ I LQ ++ +D+ L A+ + +L QG I+ ++ Sbjct: 52 SHMGKFVLTGEDVIIHLQKLVPSDLSRLTSGKAQYTVLLNEQGGIIDDLIVYHQG----- 106 Query: 67 LEIDRSKRD-SLIDKLLFYKLRSNVII 92 E++ K + ++ + R V + Sbjct: 107 -EVEEGKVEGAVGKR------REKVTL 126 Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 4/116 (3%) Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-Y 185 L + + + LR+ + D ++ P +A + L + L K + Sbjct: 223 LWQQLIEIAVVPCGLGARDTLRLEAAMALYGQDI-DNSTTPLEAGLSWL--VHLDKSSDF 279 Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 IG+ V+ + + R+ + ++ PI+ + +GT+ L Sbjct: 280 IGRSVLEKQKSTGPSRRLVGLTLAGRNIARHDYPIMHNATPVGTITSGTLSPTLGY 335 >gi|284991776|ref|YP_003410330.1| glycine cleavage system T protein [Geodermatophilus obscurus DSM 43160] gi|284065021|gb|ADB75959.1| glycine cleavage system T protein [Geodermatophilus obscurus DSM 43160] Length = 372 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 90/317 (28%), Gaps = 57/317 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ-----GKILLYFLISKIE 61 S+ V G A F+ + +T D+ + A+ + P G ++ ++ Sbjct: 53 SHLGTATVRGPGAAAFVDSCLTNDLSRIGPGQAQYTMCCLPDGDPRAGGVVDDLIVYLHG 112 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116 D +L + + ++ +L + V + + VL+ + +F+ Sbjct: 113 PDDVLLVPNAANAAEVVARLAG-AAPAGVTVTDRHTEVAVLAVQGPRSPQLLAFLGLPGE 171 Query: 117 -----------------------------------DERFSIADVLLHRTWGHNEKIASDI 141 +R +L T + Sbjct: 172 LPYMSFVTGVGGGSAEVTVCRSGYTGEHGYELLVAADRAGELWDVLVETGQDEGLRLCGL 231 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR G + P I P A + K + G+E + + R Sbjct: 232 GARDTLRTEMGYPLHGHELSPE-ITPVQARAGW--AVGWRKPAFWGREALLAEREAGPAR 288 Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKK----ALAIARIDKVDH-AIKKGM 255 + +P G +L D +G + +A+A +D A + Sbjct: 289 LLWGLRAPGRGIPRPGMAVLDADGARVGEVTSGTFSPSLRTGIALALLDTASGVAEGSEL 348 Query: 256 ALTVHGVR--VKASFPH 270 A+ V G V+ P Sbjct: 349 AVDVRGRPQTVQVVLPP 365 >gi|157414293|ref|YP_001485159.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9215] gi|166989729|sp|A8G7J2|GCST_PROM2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|157388868|gb|ABV51573.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9215] Length = 370 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63 S+ I + G + ++Q + ++ + + +L +G I+ +I + E D Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110 Query: 64 --TFILEIDRSKRDSLIDK----LLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109 +L ++ S+ + L ++ + V++ +Q N + W + Sbjct: 111 LSELLLIVNASRYEEDFQWIKNNLNMSEISITNFKKDKVLLALQGKNSFDLFEEWIESSI 170 Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144 +F I + FS + I + Sbjct: 171 SYIPTFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVTPCG 230 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D T P++A + L + + G+ + I Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGIQ 288 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 +K + + G +L + IGT+ +A+A A I+ I + Sbjct: 289 KKLVGLSIEGKAIGRKGCAVLKGEENIGTITSGSWSPTKQQAIAFAYINTTHALINNEVQ 348 Query: 257 LTVHG 261 +++ G Sbjct: 349 ISIRG 353 >gi|221133460|ref|ZP_03559765.1| glycine cleavage system aminomethyltransferase T [Glaciecola sp. HTCC2999] Length = 359 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 98/310 (31%), Gaps = 55/310 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +L+ ++ DV L A S ++ G ++ ++ +E + Sbjct: 50 SHMTIVDVKGVQAQAYLRYLLANDVAKLQDKGKALYSGMINEAGGVVDDLIVYFFDETNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 L ++ + ++ ++ L +V + + ++ A Sbjct: 110 RLVVNSATKEKDLNWLNKQAQGFDVTVTERDEFAMIAVQGPNAKAQAGKLFSAAQQEAVA 169 Query: 126 LLHRTWGHNE----------------------KIASDIKTY--------------HELRI 149 + +G A+D LR+ Sbjct: 170 GMKPFYGVQAEDLFIATTGYTGETGYEIMVPNAQAADFWQQLLDLGVAPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D TI P A M ++G++V+++ + K ++ Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTISWEPENRNFVGRDVLTQQRAAGTD-KLVGLVMK 287 Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI-----DKVDHAIKKGMALTVH 260 + +G + E GT +G ++A+AR+ D + ++K Sbjct: 288 EKGVLRAGQKVTVAGGEGVITSGTFSPTLG-HSVALARVSNTVTDTAEVEMRKKW----- 341 Query: 261 GVRVKASFPH 270 V V+ P Sbjct: 342 -VTVEVVKPS 350 >gi|322436672|ref|YP_004218884.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX9] gi|321164399|gb|ADW70104.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX9] Length = 381 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 106/324 (32%), Gaps = 75/324 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G ++ +Q ++ D L A SA+L G + ++ K+ ++ ++ Sbjct: 56 SHMGDIQLRGPGSLAAVQRLLMNDASKLQTGQAHYSAMLYENGTFVDDVVLHKLSDNDYL 115 Query: 67 LEIDRS------------------------------------KRDSLIDKLLFYKLRSNV 90 + I+ K ++ + KL Sbjct: 116 IVINAGTREKDVQWVRKQIGAMPGVHINDFSDYYTQLAIQGPKAEATLQKLT-------- 167 Query: 91 IIEIQPINGVVLSWNQEHT-----FSNSSFIDER-----FSIADVLLHRTWGHNEKIASD 140 ++ I +W Q + + + E + R WG ++ Sbjct: 168 TTDLSVIKNYWFAWGQVCGCHNVMIARTGYTGEDGFEIYIPSDEPTSSRVWGEVLDAGAE 227 Query: 141 -------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVS 192 + + LR+ + + TI +A + + KG ++G++ +S Sbjct: 228 FGIIPCGLGARNTLRLESAMALYGHEI-SDTINVFEANLGRYCKMD--KGTDFVGRDALS 284 Query: 193 RIQHRNIIRKRPMIITGTD-DLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARI 244 I+ +++ + + D + G P+ T +IG + ALA Sbjct: 285 EIEFTGGPKRKLVGLEMIDRGIGRDGYPVFTVGGEKIGEITSGSPAPFLKKNIALAYVPT 344 Query: 245 DKVDHAIKKGMALTVHGVRVKASF 268 + + +A+ + G VKA Sbjct: 345 QYA--VVDEILAVEIRGALVKAKV 366 >gi|299138136|ref|ZP_07031316.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX8] gi|298600066|gb|EFI56224.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX8] Length = 383 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 107/316 (33%), Gaps = 59/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I++ G +++ +Q ++ D L A SA+L P G + ++ K+ ++ ++ Sbjct: 57 SHMGDIQLRGPNSLAAVQKLLMNDASKLQTGQAHYSAMLYPNGTFVDDVVLHKLGDNDYL 116 Query: 67 LEIDRSKRDSLIDKLL-----FYKL----RS-----------NVIIEIQPINGV------ 100 + I+ R+ + + + S +Q + GV Sbjct: 117 IVINAGTREKDVQWVRQVIGGMSGVHVNDFSDYYTQLAIQGPKAAATLQKLTGVDLSTIK 176 Query: 101 --VLSWNQEHT-----FSNSSFIDER-----FSIADVLLHRTWGHNEKIASD-------I 141 +W Q + + + E + R WG + + Sbjct: 177 NYWFTWGQVCGCHNVMIARTGYTGEDGFEIYIPSDEPTSARVWGEVLAAGEEFGIIPCGL 236 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNII 200 + LR+ + + TI +A + L KG ++G+E + +Q+ Sbjct: 237 GARNTLRLESAMALYGHEI-SDTINVFEANLGRYC--KLDKGTDFVGREALLEVQNSGGP 293 Query: 201 RKRPMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 ++ + + D ++ D +IG + ALA + + + Sbjct: 294 SRKLVGLEMVDRGIGRDGYLVATLDGTKIGEITSGSPAPFLKKNIALAYVPVAYTE--LG 351 Query: 253 KGMALTVHGVRVKASF 268 +A+ + G VKA Sbjct: 352 TELAVEIRGQLVKAQV 367 >gi|324997847|ref|ZP_08118959.1| FAD dependent oxidoreductase [Pseudonocardia sp. P1] Length = 802 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V LS + ++V G A FLQ ++ +DV P + +L G +L ++++ Sbjct: 464 VDLSAERRVEVTGPHAAEFLQRLVCSDVDG-PAGHVVETLMLDADGGVLAAPTVARLGPQ 522 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE 107 F++ + +RD + L Y R+ V I ++ + W Sbjct: 523 RFLVVL-AERRD--VAALRRYA-RTGVEITDVSTTTACLGLWGPA 563 >gi|332224808|ref|XP_003261560.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Nomascus leucogenys] Length = 866 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 98/326 (30%), Gaps = 74/326 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS + G+ +I L + + + S +LTP+G++ +S Sbjct: 532 TDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQSPG 589 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVIIE-IQPINGVVLSWNQEHT--- 109 F+L + LR +V I+ I GV+ + Sbjct: 590 EFLLITGSGS--------ELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVL 641 Query: 110 --FSNSSFIDE--------------------RFSIADVLLHRTWGHNEKIAS-------- 139 ++ D+ R S L + E + Sbjct: 642 QKLTSEDLSDDVFKFLQTKFLKVSSIPVTATRISYTGELGWELYHRREDSLALYDAIMNA 701 Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189 + TY + LR+ + T P +A ++ + L K +IG++ Sbjct: 702 GQEEGIDNFGTYAMNALRLEKAFRAWGLEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQ 758 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIA 242 + +I+ + + R+ + TDD+ P G+ I + +G + A A Sbjct: 759 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYV 818 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASF 268 ++ + + + L Sbjct: 819 PVELSEVGQQVEVELLGKNYPAVIIR 844 >gi|330970923|gb|EGH70989.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aceris str. M302273PT] Length = 1006 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 98/322 (30%), Gaps = 71/322 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967 Query: 240 AIARI-DKVDHAIKKGMALTVH 260 +AR+ ++V + G + Sbjct: 968 GLARMGERVFAPLADGSVIEAE 989 >gi|66047939|ref|YP_237780.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas syringae pv. syringae B728a] gi|63258646|gb|AAY39742.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas syringae pv. syringae B728a] Length = 1006 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 98/322 (30%), Gaps = 71/322 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 RDAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967 Query: 240 AIARI-DKVDHAIKKGMALTVH 260 +AR+ ++V + G + Sbjct: 968 GLARMGERVFAPLADGSVIEAE 989 >gi|322828503|gb|EFZ32270.1| glycine cleavage T-protein, putative [Trypanosoma cruzi] Length = 373 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47 S+ F +V G F + + + V L + + + Sbjct: 54 SHVGFFEVRGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSNYSDHLLA 113 Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86 +GKI+ + +++ + D ++E+DR S +++L K Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173 Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 R +V ++ I S++ E F I + ++LL + + + + Sbjct: 174 GRRSVRVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200 LR G+ + + I P A LM + + +G +IG E V R + + Sbjct: 230 SLRTEAGLCLYSHEL-SEEINPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287 Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255 R R I++ + +G PIL D+ +G + V + +A+ ID+ + + Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETV 347 Query: 256 ALTVHGVRV--KASFP 269 L V G R+ + + P Sbjct: 348 ELEVRGKRLPGEVTLP 363 >gi|301614085|ref|XP_002936519.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 404 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 88/271 (32%), Gaps = 46/271 (16%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK IPF+++++ AD+ L S +G I+ +++ + + + Sbjct: 89 KVLGKDRIPFMESLVVADIGELKENQGTLSLFTNEKGGIIDDLIVTNTSDGYLYVVSNAG 148 Query: 73 KRDS----LIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118 + +++KL +K +V +E + + + D+ Sbjct: 149 CAEKDSAHMLNKLQEFKAAGRDVDLEHIDCALLAVQGPLSARVLQAGMNDDLSKLPFMTS 208 Query: 119 ----RFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRIN 150 F I + R +++ + + LR+ Sbjct: 209 VYTAVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSLRLE 268 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P +A + G + G ++ Q + ++ + + +T Sbjct: 269 AGLCLYGNDI-DETTSPVEASLVWTLGKRRRTAMDFPGASIIV-PQIKGKVKHKRVGLTS 326 Query: 210 TDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239 T +PIL + IG + +L Sbjct: 327 TGPPVRQHAPILNQEGRIIGEVTSGCPSPSL 357 >gi|257069117|ref|YP_003155372.1| glycine cleavage system T protein (aminomethyltransferase) [Brachybacterium faecium DSM 4810] gi|256559935|gb|ACU85782.1| glycine cleavage system T protein (aminomethyltransferase) [Brachybacterium faecium DSM 4810] Length = 425 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 71/292 (24%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A F ++T D+ + + G IL ++ ++EE+ F L + Sbjct: 69 IEISGPDAFDFTNLLVTRDLSKCAVGQCKYVFLTDQHGGILNDPILLRLEENRFWLSLAD 128 Query: 72 SK----RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------------- 106 S + +V IE + V + + Sbjct: 129 SDILLWARGVATHAGM-----DVSIEEIDVGPVQVQGPKSYAVMRDLLGEAVADLRYYYL 183 Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------------HEL 147 + T R + + + H+ ++ K + H Sbjct: 184 HDFTLDGIDVTVSRTGYTGEIGYEIYVHDASQNAE-KLWQLVLEAGEPHGLRVIGPCHIR 242 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 RI G++ D T P + M + L + ++G++ + R++ R + Sbjct: 243 RIEGGMLAHGADITVQTT-PFEVGMGYDWMVDLEQEADFVGKDALRRLKAEG---PRCKL 298 Query: 207 ITGTDDLPPSGS----------PILTDDIEIGTLGVVVG------KKALAIA 242 + P GS P+ D +G + LA+ Sbjct: 299 VGLEIGGEPLGSYNDGSMIDAFPVHHDGAVVGQVTSACHSPRLEKNIGLALV 350 >gi|302188546|ref|ZP_07265219.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas syringae pv. syringae 642] Length = 1006 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 89/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVPACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA+ K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAAAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|294677836|ref|YP_003578451.1| sarcosine oxidase subunit alpha [Rhodobacter capsulatus SB 1003] gi|294476656|gb|ADE86044.1| sarcosine oxidase, alpha subunit [Rhodobacter capsulatus SB 1003] Length = 984 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 92/317 (29%), Gaps = 62/317 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TLP R + + G ++ ++ ++ EDT++ Sbjct: 651 STLGKIVVKGPDAGRFLDMMYTNLMSTLPVGKCRYGLMCSDNGFLIDDGVVVRLSEDTWL 710 Query: 67 LEIDRSKRDSLIDKL-----------LFY-------------------KLRSNVIIEIQP 96 D + + Y KL + Sbjct: 711 CHTTSGGADRIHGHMEDWLQCEWWDWKVYTANLTEQYAQVAVVGPKARKLLEKLGGMDVS 770 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKIAS 139 + QE T R S + L LH+ + Sbjct: 771 KEALPFMTYQEGTLGGFPARVFRISFSGELSYEIAVPANMGLAFWEALHKAGEEFGVMPY 830 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + H +R G + + T+ P D + IS K Y+G+ R + Sbjct: 831 GTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLGW--AISKKKADYLGKRAQERKHMTDP 887 Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247 R + + T + P G + + + V G KK +A+ + Sbjct: 888 DRWTLVGLETLDGSVLPDGVYAIDEGVNENGQRKVQGRVTSTYYSPMLKKGIAMGLVRHG 947 Query: 248 DHAIKKGMALTVHGVRV 264 + + + G +V Sbjct: 948 PARMGEVLEFPADGGKV 964 >gi|50418743|ref|XP_457891.1| DEHA2C04708p [Debaryomyces hansenii CBS767] gi|49653557|emb|CAG85941.1| DEHA2C04708p [Debaryomyces hansenii] Length = 395 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G++ FLQ + ++ L + S L QG ++ +I+K E+ + + + Sbjct: 72 RLSGQNVADFLQKVTPINLSELEVNSSSLSVFLNEQGGVIDDCIITKHGENEYYMVSNAG 131 Query: 73 KRDSLIDKLLF 83 R+ I L Sbjct: 132 CREKDIAFLKK 142 >gi|226355345|ref|YP_002785085.1| aminomethyltransferase [Deinococcus deserti VCD115] gi|259647490|sp|C1D0F7|GCST_DEIDV RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|226317335|gb|ACO45331.1| putative aminomethyltransferase (Glycine cleavage system T protein) [Deinococcus deserti VCD115] Length = 357 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 41/105 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G+ A+ FLQ + DV L A+ + + +G ++ I + E+ ++ Sbjct: 57 SHMGEFRIQGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENEYL 116 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 + ++ S D L V + + +L+ Sbjct: 117 MVVNASNIDKDWAHLQTLAAGFGVTLTNESDRWALLAVQGPKAAE 161 >gi|330954947|gb|EGH55207.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae Cit 7] Length = 1006 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|264678308|ref|YP_003278215.1| glycine cleavage system protein T [Comamonas testosteroni CNB-2] gi|262208821|gb|ACY32919.1| glycine cleavage system T protein [Comamonas testosteroni CNB-2] Length = 378 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A L++++ DV+ L R +L QG IL + ED F+ Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNRGEDLFL 118 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + +++ I + Sbjct: 119 I-VNGACKEADIAHIQ 133 >gi|291618742|ref|YP_003521484.1| GcvT [Pantoea ananatis LMG 20103] gi|291153772|gb|ADD78356.1| GcvT [Pantoea ananatis LMG 20103] Length = 393 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 54/311 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + + G+ FL+ ++ DV L A + +L ++ ++ ++E F Sbjct: 78 SHMTIVDLKGERTREFLRFLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMDETFF 137 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119 L ++ + R+ + + + V + E + + + Q + + F D + Sbjct: 138 RLVVNSATREKDLAWIGEHAQGYGVALTERDDLVLIAVQGPQAQQKAQTLFSDAQRQAVE 197 Query: 120 -----------------------------FSIADVLL-HRTWGHNEKIASDIKTYHELRI 149 AD + + + + LR+ Sbjct: 198 GMKPFFGVQAGELFIATTGYTGEAGYEIALPAADAVGFWQRLLSAGVKPAGLGARDTLRL 257 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG--CYIGQEVVSRIQHRNIIRKRPMII 207 G+ + ++ P A M IS G +IG+E + + + K +I Sbjct: 258 EAGMNLYGQEM-DESVSPLAANMGWT--ISWEPGDRHFIGREALESQREKGT-EKLVGLI 313 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALT 258 + +G P+ D + G L V +A+AR+ + + Sbjct: 314 LTEKGVLRNGLPVRFTDQQ-GQLQQGVITSGSFSPTLGYSIALARV-PAGIGENAIVEIR 371 Query: 259 VHGVRVKASFP 269 + VK + P Sbjct: 372 NREMPVKVTKP 382 >gi|172041472|ref|YP_001801186.1| glycine cleavage system aminomethyltransferase T [Corynebacterium urealyticum DSM 7109] gi|171852776|emb|CAQ05752.1| glycine cleavage system T protein [Corynebacterium urealyticum DSM 7109] Length = 396 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 107/325 (32%), Gaps = 79/325 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A L A+I+ + + A+ S + T G I+ + ++ +D Sbjct: 55 LSHMGEVEVSGPQAAELLDYALISR-LSAVKVGKAKYSMLCTEDGGIVDDLITYRLADDD 113 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110 F++ + + + L R+ +V + Q +++ Sbjct: 114 FLVVPNAGNAPRVAEAL---AQRAEGFDVTVVDQTAEKSLVAIQGPKAAEVMHAIVENVT 170 Query: 111 ----SNSSFIDERFSIAD---------------VLLHRT--------------------- 130 ++ + D R ++ L+ RT Sbjct: 171 DAPEASGATEDVRGAVDGLGYYAAFKGIVAGQPALIARTGYTGEDGFEIIVDNDAAEQVW 230 Query: 131 ------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 + + + LR+ G+ + + P DA + +L +K Sbjct: 231 NIALAKATELDGLPCGLAARDTLRLEAGMPLYGNEL-NDELTPVDAGLGILAATK-SKDS 288 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDD----IEIGTLGVVVGKKAL 239 ++G++ + + + R + + G SG +L + IG + L Sbjct: 289 FVGRDAIVAAKEKGAAR-VLIGLQGEGRRAARSGYAVLAGEGEDAQPIGEVTSGALSPTL 347 Query: 240 ----AIARIDKVDHAIKKGMALTVH 260 A+A +DK A ++G A TV Sbjct: 348 GYPVAMAYVDKT--ATEEGGAATVG 370 >gi|15637153|gb|AAL04443.1| glycine decarboxylase subunit T [Beta vulgaris] Length = 127 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK IPFL+ ++ D+ L S +G ++ +I+K+++D L ++ Sbjct: 36 LSLKGKDCIPFLEKLVVGDLAGLAPGTGTLSVFTNEKGGVIDDSVITKVKDDHIYLVVNA 95 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 96 GCRDKDLAHI 105 >gi|330938588|gb|EGH42161.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. pisi str. 1704B] Length = 957 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 622 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 681 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 682 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 741 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 742 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 800 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 801 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 858 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 859 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 909 >gi|327191046|gb|EGE58099.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli CNPAF512] Length = 378 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 56/302 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ S +++ Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFIVVNASCKEA 129 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 130 DLAHLQTHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A+ + R H + A + LR+ G+ D Sbjct: 190 VSRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249 Query: 163 STIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 +T P +A ++ G G + G + R+R + + P Sbjct: 250 TTS-PVEAALEWAMQKARRTGGA--RAGGFPGSGRILSELENGAARRR-VGLKPEGKAPV 305 Query: 216 SG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 G + + D EIG + V G A+ + + + + V Sbjct: 306 RGHARLYADAEGRTEIGEVTSGGFGPSVEGPVAMGYVPVSYAAAGTQVYAEVRGKFLPVT 365 Query: 266 AS 267 S Sbjct: 366 VS 367 >gi|153002184|ref|YP_001367865.1| glycine cleavage system aminomethyltransferase T [Shewanella baltica OS185] gi|166221568|sp|A6WSL3|GCST_SHEB8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|151366802|gb|ABS09802.1| glycine cleavage system T protein [Shewanella baltica OS185] Length = 364 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + R+ + + +V + +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159 >gi|332971110|gb|EGK10077.1| aminomethyltransferase [Psychrobacter sp. 1501(2011)] Length = 381 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 5/176 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64 S+ + G A +LQ ++ DV L A S +L +G I+ ++ + E+ Sbjct: 52 SHMVITDIEGSQAKAWLQKLLANDVAKLKTVGKALYSGMLNEEGGIIDDLIVYLMNEEET 111 Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 + + + + RD + V + +P ++ Sbjct: 112 QYRIVSNAATRDKDLANFNKVAKGFEVTLTERPELAILAIQGPNAVAKLKQAKPTWSETL 171 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 + L I ++ + R + D LP + L NGI Sbjct: 172 EGLKPFVGADLTDIEAN--NWFVARTGYTGEDGVEVILPGDSAEEFYKLMLENGIK 225 >gi|260809869|ref|XP_002599727.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae] gi|229285008|gb|EEN55739.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae] Length = 379 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A+ F++++ DV L + +G I+ ++SK E + + Sbjct: 56 RIHGKDAVKFIESLTVGDVAGLQENQGTLTLFTNDRGGIMDDLIVSKTSEGFLYVVTNAG 115 Query: 73 KRDSLIDKLL 82 + I + Sbjct: 116 CAEKDIAHMQ 125 >gi|304410728|ref|ZP_07392346.1| glycine cleavage system T protein [Shewanella baltica OS183] gi|307304823|ref|ZP_07584573.1| glycine cleavage system T protein [Shewanella baltica BA175] gi|304351212|gb|EFM15612.1| glycine cleavage system T protein [Shewanella baltica OS183] gi|306912225|gb|EFN42649.1| glycine cleavage system T protein [Shewanella baltica BA175] Length = 364 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A +L ++ + + + + Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + R+ + + +V + +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159 >gi|217977401|ref|YP_002361548.1| glycine cleavage system T protein [Methylocella silvestris BL2] gi|217502777|gb|ACK50186.1| glycine cleavage system T protein [Methylocella silvestris BL2] Length = 377 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 47/256 (18%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT----FILEIDRSKRDSLIDKLLF-- 83 D+ +L R + +L G IL +++++ + L ++ + + + + Sbjct: 82 DIASLNPGQMRYTQLLDANGHILDDLMVTRLANEGGRQRLFLVVNAASKAADFAHISAAL 141 Query: 84 --YKLR--------------------------SNVII---EIQPINGVVLSWNQEHTFSN 112 + L S + ++GV L ++ Sbjct: 142 PGFALTPLPQLALLALQGPQAAEVLEKIVPVVSRLTFMRSAEFEVDGVRLRISRSGYTGE 201 Query: 113 SSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 F I + A+V + LR+ G+ D P +A Sbjct: 202 DGFEISLPAAKAEVFARTLLSDPRVFPVGLGARDSLRLEAGLCLCGHDI-DGATDPVEAG 260 Query: 172 MDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEI 227 + L IS + G + G ++++ R R+R +I G+ I D I Sbjct: 261 L--LWSISKRRRVEGGFPGFARLAQVMARGPERRRVGLILDGKAPAREGAEIETPDGRAI 318 Query: 228 GTLGVVVGKKALAIAR 243 G L G A ++ R Sbjct: 319 GRLTS--GGYAPSLGR 332 >gi|240978642|ref|XP_002403006.1| dimethylglycine dehydrogenase, putative [Ixodes scapularis] gi|215491270|gb|EEC00911.1| dimethylglycine dehydrogenase, putative [Ixodes scapularis] Length = 758 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 96/294 (32%), Gaps = 61/294 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + ++V GK FL ++ + + S +LTP+GK+ ++++ +D Sbjct: 430 IDLTPFAKLEVTGKDVNVFLDRLLANKLPKVNS--INISHMLTPKGKVYAEVTVTRLAQD 487 Query: 64 TFILEI-DRSKRDSLI---DKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNS 113 + + S+ L D + +++ +V I L H+ ++ Sbjct: 488 KYFVITGSGSELHDLRWMEDHVREWRI-EDVEINNVTDRIAALGIAGPHSANLLSKLTDV 546 Query: 114 SFIDERFSIA--------------------DVLLHRTWGHNEKIAS-------------- 139 S D++F L + + ++ Sbjct: 547 SLDDDKFPFLHAREMSVAGIPVTALRISYTGELGWELYHDRTQTSALYEALLDAGQAYSI 606 Query: 140 -DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195 D TY + LRI G D + P +A + I + K ++G+E + + Sbjct: 607 GDFGTYALNSLRIEKGFRLWGADMTVDS-NPFEAGLGPF--IRMKKPADFVGKEALQKSL 663 Query: 196 HRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIA 242 +K + + T+ P + +G V A+A Sbjct: 664 REGFRKKLVHLSVDATEVDPEGNETVWCSGKVVGYTTSGSYGCQVRQSLAMAYL 717 >gi|99080812|ref|YP_612966.1| sarcosine oxidase alpha subunit family protein [Ruegeria sp. TM1040] gi|99037092|gb|ABF63704.1| sarcosine oxidase alpha subunit family [Ruegeria sp. TM1040] Length = 1011 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 680 VKGPDAGKFLDMLYTNMMSTLKIGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 739 Query: 74 RDSLIDKL 81 D + + Sbjct: 740 ADRIHAHM 747 >gi|237802379|ref|ZP_04590840.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025236|gb|EGI05292.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] Length = 792 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 457 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 516 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 517 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 576 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 577 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYALGVLEKIAEAGKQYNLTP 635 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 636 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 693 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 694 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 744 >gi|71003822|ref|XP_756577.1| hypothetical protein UM00430.1 [Ustilago maydis 521] gi|46096108|gb|EAK81341.1| hypothetical protein UM00430.1 [Ustilago maydis 521] Length = 454 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 95/298 (31%), Gaps = 53/298 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K G A+ FLQ + A + ++P + S +++ QG IL +I+K +D+F + + Sbjct: 137 KFKGPGALKFLQHLTPASLTSMPAFSSTLSVLMSEQGGILDDLIITKHADDSFYVVTNAG 196 Query: 73 KRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH----------------TFSNS 113 R + V E+ G++ TF S Sbjct: 197 CRTEDLAWFKKQLDAWKGDAVKHEVMDDWGLLALQGPTAAKVLEKLVGDFDLNTLTFGKS 256 Query: 114 SFIDERFSIADVLLH--------------------------RTWGHNEKIASDIKTYHEL 147 F+ + + V H +E + + L Sbjct: 257 VFVPLKIAGDKVECHVARAGYTGEDGFEISIPPASTVKVAEALLSDSEVQLAGLAARDSL 316 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ G+ D +++ P + + G ++G E V + R+R + Sbjct: 317 RLEAGMCLYGHDL-DASVSPVEGALAWCVGKDRRAAADFLGAERVLKELKEGPPRRRIGL 375 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260 + + +G + + K +A+A ++ H KKG L V Sbjct: 376 FIDGGIAREGANLFTPEGKVVGRVTSGIPSPTLGKNIAMALVENGQH--KKGTKLKVE 431 >gi|13241964|gb|AAK16489.1|AF329478_4 sarcosine oxidase subunit A [Arthrobacter sp. 1IN] Length = 967 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ GK A FL I T L +AR + G + + ++ ED F++ Sbjct: 637 IEIRGKDAAEFLNRIYTNGYTKLKVGMARYGVMCKADGMVFDDGVTLRLAEDRFLMHTTT 696 Query: 72 SKRDSLIDKL 81 ++D L Sbjct: 697 GGAAGVLDWL 706 >gi|116252318|ref|YP_768156.1| glycine cleavage system aminomethyltransferase T [Rhizobium leguminosarum bv. viciae 3841] gi|115256966|emb|CAK08060.1| putative aminomethyltransferase (glycine cleavage system t protein) [Rhizobium leguminosarum bv. viciae 3841] Length = 378 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 91/300 (30%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ + +++ Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGCILDDLMITHL-DDHLFIVVNAACKEA 129 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + + +I +Q V + + F+D R Sbjct: 130 DVAHLKAHIGDQCDITVLDRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A R H + A + LR+ G+ D Sbjct: 190 VSRSGYSGEDGFEISIPSDKAVDATMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G G + G + R+R + + P G Sbjct: 250 TTS-PVEAALEWAMQKARRGNGARAGGFPGSGRILSELENGASRRR-VGLKPEGKAPVRG 307 Query: 218 -SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D +EIG + V G A+ + + + + S Sbjct: 308 HAKLYADAEGKVEIGEVTSGGFGPSVEGPVAMGYVPLSHAAAGTLVYAEVRGKYLPITVS 367 >gi|86136319|ref|ZP_01054898.1| aminomethyl transferase family protein [Roseobacter sp. MED193] gi|85827193|gb|EAQ47389.1| aminomethyl transferase family protein [Roseobacter sp. MED193] Length = 373 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + T DV R I +G ++ ++ K+ D + L I Sbjct: 65 VEISGPDAAQLIQYLTTRDVSKTKIGQGRYVPICNHEGMLINDPVLLKLASDRYWLSIAD 124 Query: 72 SKRD 75 S + Sbjct: 125 SDIE 128 >gi|149914513|ref|ZP_01903043.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] gi|149811306|gb|EDM71141.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter sp. AzwK-3b] Length = 369 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 51/307 (16%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70 +++ G A +Q + D+ + I+ G +L + K+ ED + + I D Sbjct: 66 VELRGPDAGRLMQMLTPRDLRGMTPGQCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------RFSIA 123 + + + R +V+++ ++ + + + + F D+ RF + Sbjct: 126 SDLLYWV--RATAHGWRLDVLVDEPDVSPLAVQGPRADDLMAAVFGDKVRDIRFFRFGVF 183 Query: 124 DVLLHRTWGHNEKIA-----------SDI--KTYHEL------------------RINHG 152 D + SDI +H L RI G Sbjct: 184 DFQGRDMVIARSGYSKQGGFEIYVEGSDIGMPLWHALMEAGAGMDVHAGCPNLIERIEGG 243 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ D PH+ + GC IG++ + R+ +++ + Sbjct: 244 LLSYGNDMTDDNT-PHECGLGRFCNTHTAIGC-IGRDALLRVAKEGPVQQIRAVAIDGPK 301 Query: 213 LPPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264 +PP P+L +G + A+ + R+ D + + Sbjct: 302 VPPCDHWWPLLAQGKPVGRISSAAWSPDFGTNVAIGMVRMTHWDAGTRLQVQTPNGIREA 361 Query: 265 KASFPHW 271 + W Sbjct: 362 EVREAFW 368 >gi|77461426|ref|YP_350933.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas fluorescens Pf0-1] gi|77385429|gb|ABA76942.1| sarcosine oxidase alpha subunit [Pseudomonas fluorescens Pf0-1] Length = 1005 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 87/290 (30%), Gaps = 57/290 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLELYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKLLSAVTDIDLA 790 Query: 96 PINGVVLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144 ++W + SF E +V G EKI K Y Sbjct: 791 NEAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVEAGKQYNLTPY 850 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 H LR G + D ++ P D M G + +IGQ ++R Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGQRGMNREDCVRD 908 Query: 200 IRKRPMIITGTDDLP--PSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ + + +G + +L Sbjct: 909 QRKQLVGLKPIDPNVWLPEGAQLVFNTKQSIPMTMVGHVTSSYAHNSLGY 958 >gi|330874532|gb|EGH08681.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 360 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L QG ++ ++ D + Sbjct: 50 SHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQGGVIDDMIVYLTA-DGY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|311741484|ref|ZP_07715308.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303654|gb|EFQ79733.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 370 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 98/312 (31%), Gaps = 60/312 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A FL ++ L A+ S I G I+ + + EED F Sbjct: 51 LSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDKF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF------------ 110 ++ + D++ D+L R+ +V ++ + + +++ Sbjct: 111 LVVPNAGNADTVWDELNN---RAEGFDVTLKNESRDVAMIAVQGPKAAEILVPLVEDNKQ 167 Query: 111 ----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD---- 140 + + I R + W K + Sbjct: 168 DEVYNLGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGEEYDIK 227 Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + LR+ G+ + I P +A M + + ++G EV+ R + Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMAR--AFAKKEADFVGAEVI-RQRAA 283 Query: 198 NIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + +T T +G+ + D ++GT+ L V A+ + A Sbjct: 284 EGPQVAITGLTSTQRRAARAGAEVFMGDKKVGTVTSGQPSPTLGH----PVAIALLETSA 339 Query: 257 LTVHGVRVKASF 268 G V+ Sbjct: 340 ELEPGAEVEVEI 351 >gi|49474552|ref|YP_032594.1| glycine cleavage system aminomethyltransferase T [Bartonella quintana str. Toulouse] gi|49240056|emb|CAF26481.1| Glycine cleavage system protein t [Bartonella quintana str. Toulouse] Length = 372 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 35/260 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL D L +R + +L Q IL +++++ E F+ Sbjct: 61 SHMQLITVEGAQAVEFLSYAFPIDAALLKIGQSRYNYLLNEQAGILDDLILTRLAECRFM 120 Query: 67 LEIDRSKRDSLIDKLLFYKL----R----SNVIIEIQPINGVVLSW-------------- 104 L + + + +L + R V++ +Q + Sbjct: 121 LVANAGNAQADLAELEKRAVGFECRVIALERVLLALQGPEAAAVIADAGLPGNELLFMQG 180 Query: 105 ---NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIV 154 Q+ + S + E + + EK+ D + LR+ G+ Sbjct: 181 FEPQQDWFIARSGYTGEDGFEIALPQRQAQALAEKLLCDSRVEWVGLAARDSLRLEAGLC 240 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D P T P DA + ++ K + G + + R R + T Sbjct: 241 LHGNDITPDTT-PIDAALAWAVPKNVREKAQFYGAKAFLEALEKGPSRCRVGLKPQTRQP 299 Query: 214 PPSGSPILTD-DIEIGTLGV 232 +G+ +L D +IG + Sbjct: 300 IRAGAVLLDDLGNQIGVVTS 319 >gi|83951959|ref|ZP_00960691.1| putative aminomethyltransferase protein [Roseovarius nubinhibens ISM] gi|83836965|gb|EAP76262.1| putative aminomethyltransferase protein [Roseovarius nubinhibens ISM] Length = 779 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 89/288 (30%), Gaps = 62/288 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62 +V G A +Q +T ++ L +A+ G ++ + ++ E Sbjct: 449 EVTGPDAEELMQLCVTRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 508 Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPIN 98 L D+ ++ + L S + I+ P Sbjct: 509 TSGLWLREQAERHGLNAWVRNSTDQLHNIAVQGRHSRDIL-SKIFWTPPQQPTIDELPWF 567 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DI 141 + ++ + S S + R + L + + H + + Sbjct: 568 RLTIA--RLGDLSGPSVVISRTGYSGELGYEIFCHPKHAVEIFDKVWEAGAPYGITPLGL 625 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LRI G++ ++F T P +A + + + +IG+ V R + Sbjct: 626 AALDMLRIEGGLIFAGSEF-DDTTDPFEAGIGFTVPLKSMEDDFIGRVAVER--RKASPH 682 Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVG----KKALAIARI 244 ++ + + P G + ++G + + K +A+ R+ Sbjct: 683 RKLVGFEVQGGVVPVPGDCVRVGKAQVGEITSAMKSPILGKVIALGRV 730 >gi|296536598|ref|ZP_06898677.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957] gi|296263076|gb|EFH09622.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957] Length = 367 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 50/285 (17%) Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRS 88 AD+ L + +L P+G I+ F+++ + D L ++ S++ + L+ L + Sbjct: 76 ADIRILKPGRQKYGLLLNPEGGIVDDFMVANLGGDRLFLVVNASRKAVDLP-LIEAALPA 134 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------------------------ 118 V + P ++ + + Sbjct: 135 GVRLTPLPDRALLAFQGPQAVPLLAGLAPAVAALPFMGVAETEIDGIPVLVSRSGYTGED 194 Query: 119 ------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 A+ L R + + + LR+ G+ D T P +A + Sbjct: 195 GVEISVPAERAEALAKRLLSLPGVVPAGLGARDSLRLEAGLCLYGNDI-DETTSPVEAAL 253 Query: 173 DLLNG----ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEI 227 G + + G E R R I+ + + I + Sbjct: 254 VWTIGKRRRMEWN---FPGAERTRAELENGPSRLRVGILPEGRQPARAHTAIHAPGGAAM 310 Query: 228 GTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + +L A+ + + A + L V G + A Sbjct: 311 GEITSGTFGPSLNGPCAMGYVARGHAADGTALELQVRGKALPARV 355 >gi|290955276|ref|YP_003486458.1| dehydrogenase [Streptomyces scabiei 87.22] gi|260644802|emb|CBG67887.1| putative dehydrogenase [Streptomyces scabiei 87.22] Length = 807 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 57/282 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A L+ + T V + L G I ++++ DTF + + Sbjct: 495 LEVSGPGAADLLERLCTGKVAK-SVGSVTYTLFLDHDGGIRSDVTVARLAHDTFQIGANG 553 Query: 72 SK-RDSLIDKL-----------------------------------------LFYKLRSN 89 + D + L L Y R+ Sbjct: 554 NIDLDWITRHLPADGTVQVRDITPGTCCIGLWGPLARKVLQPLTDADFSNDGLKY-FRAK 612 Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + LS+ E + + D+ + D L + + ++ LR Sbjct: 613 QAYIGSVPVTAMRLSYVGELGWEIYTTADQGQKLWD-TLWEAARPLGGVIAGRGAFNSLR 671 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G TD P++A + + L K +IG++ + R + +R++ + Sbjct: 672 LEKGYRSFGTDMTYEHD-PYEAGVGF--AVKLDKDDFIGKDALLR--RKENVRRKLSCLV 726 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244 D + P+L D +G + K +A A + Sbjct: 727 VDDPRSVVLGKEPVLDGDRPVGYVTSAAYGYTIGKGIAYAWL 768 >gi|271965320|ref|YP_003339516.1| dimethylglycine dehydrogenase precursor [Streptosporangium roseum DSM 43021] gi|270508495|gb|ACZ86773.1| dimethylglycine dehydrogenase precursor [Streptosporangium roseum DSM 43021] Length = 808 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 88/285 (30%), Gaps = 62/285 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G+ A FL+ I T DV P +L G I ++++ D F + + Sbjct: 495 IEVGGRGAAAFLRRISTGDVGR-PVGSVTYCLLLNADGGIRGDITVARLGPDLFQIGANG 553 Query: 72 SK-RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118 + D L L S VI +I V W Sbjct: 554 NLDLDWLHRHLPADG--SVVIRDITAGTCCVGVWGPRARDLMVPLAGPDFSRDGFRYFRG 611 Query: 119 -------------RFSIADVLLHRTWGHNEK-----------------IASDIKTYHELR 148 R S L + + IA + LR Sbjct: 612 KRGHVGTVPVTALRLSYIGELGWELYTTADLGAKLWDTLWEEGLRHGVIAGGRGAFDSLR 671 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRP- 204 + G TD P++A + G ++ K G +IG+E + + R +R+R Sbjct: 672 LEKGYRSFGTDMTYEHD-PYEAGL----GSAVRKAGTGDFIGRE--ALQERRASVRRRLT 724 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244 + I G D + P+ +G + + +A A + Sbjct: 725 CLTIDGPDAVVMGKEPVYDGGKCVGYVTSAAYGHTIGRGVAYAWL 769 >gi|126435898|ref|YP_001071589.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp. JLS] gi|126235698|gb|ABN99098.1| glycine cleavage system T protein [Mycobacterium sp. JLS] Length = 364 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 60/303 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A ++ A +T D+ + A+ + G ++ + + +D Sbjct: 52 SHLGKALVRGPGAAAYVNAALTNDLNRIGPGKAQYTLCCNDSGGVIDDLIAYYVSDDEIF 111 Query: 67 LE---------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHT 109 L + RS ++ Q V+ Sbjct: 112 LVPNAANTAAVVAALAERAPDGVTVTDEH------RSYAVLAAQGPKSAEVLGGLGLPTD 165 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------------- 146 ++D + V + RT E+ + + + Sbjct: 166 MDYMGYVDAELNGTAVRVCRTGYTGEQGYELLPAWDDAPAVFDALVSAVRDAGGELAGLG 225 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR- 201 LR G + P I P A + K + G++ + + R Sbjct: 226 ARDTLRTEMGYPLHGHELSPE-ISPLQARCGW--AVGWRKDAFWGRDALLAEKEAGPKRL 282 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257 R + G L P + + D +G K +A+A +D H I G + Sbjct: 283 LRGLRAVGRGVLRPDLT-VFDGDTAVGVTTSGTFSPSLKVGIALALVDTA-HDIADGSRV 340 Query: 258 TVH 260 V Sbjct: 341 EVD 343 >gi|3334196|sp|O23936|GCST_FLATR RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|2467117|emb|CAB16917.1| T-Protein precursor [Flaveria trinervia] Length = 407 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 91/280 (32%), Gaps = 54/280 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK + FL+ ++ ADV L + +G + +I+K+ Sbjct: 79 SLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVT 138 Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82 +D L ++ RD S + L Sbjct: 139 DDHIYLVVNAGCRDKDLAHIEQHMKAFKAKGGDVSWHIHDERSLLALQGPLAGSTLQHLT 198 Query: 83 FYKLRSNV------IIEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 L S + II+I + + E F S + +A +L ++ G Sbjct: 199 KDDL-SKMYFGDFRIIDISGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 257 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + LR+ G+ D I P +A + G +G ++G EV+ + Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRRAEGGFLGAEVILK 314 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 +R + + T S S I + IG + Sbjct: 315 QIADGPAIRR-VGLFSTGPPARSHSEIQNEQGENIGEVTS 353 >gi|294676692|ref|YP_003577307.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003] gi|294475512|gb|ADE84900.1| glycine cleavage T protein-1 [Rhodobacter capsulatus SB 1003] Length = 369 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 58/289 (20%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A+ L+A++ D+ L R + G IL +++ D L ++ + ++ Sbjct: 66 EAVAALEALVPVDIAGLGLNRQRYAMFTNEAGGILDDLMVANRG-DHLFLVVNAACAEAD 124 Query: 78 IDKLLFYKLRSNV----------IIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADVL 126 I L R++V ++ +Q + F+D RF Sbjct: 125 IAHL-----RAHVPGVTVVEGRGLLALQGPLAETALARLVPGVAAMRFMDSARFVWEGAD 179 Query: 127 LH--------------------------RTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160 L E + LR+ G+ D Sbjct: 180 LWVSRSGYTGEDGFEISVPDAVIEGFARALLAMAEVAPIGLGARDSLRLEAGMPLYGHDI 239 Query: 161 LPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 T P +A + +G + G + + R RKR + Sbjct: 240 DTETT-PVEAGLSWAIQKARRSGGAREGGFPGADRILRELTEGAARKRIGLRPEGRAPMR 298 Query: 216 SGSPILT---DDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGM 255 G I IG + + G A+A +D A G Sbjct: 299 EGVEIYAEATGGSPIGRVTSGGFGPSIDGPMAMAYLPVDLAPGATVYGE 347 >gi|83945324|ref|ZP_00957672.1| glycine cleavage system T protein [Oceanicaulis alexandrii HTCC2633] gi|83851158|gb|EAP89015.1| glycine cleavage system T protein [Oceanicaulis alexandrii HTCC2633] Length = 364 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 53/308 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G + L+ +ITAD+ L + + +L +G I ++S+ +++ Sbjct: 53 SHMGQARLIGDESA--LEKLITADLAALQSGEQKYTLLLNSEGGIKDDLMVSRPDDEGLF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118 L ++ + + S D Y + + ++E+ + L Q D Sbjct: 111 LVVNAACKRSDFD----YIIEATKGVAELVELDGRALLALQGPQAGAVMAELCPDAAKMV 166 Query: 119 -----RFSIADVLL--------------------------HRTWGHNEKIASDIKTYHEL 147 F + + L + + L Sbjct: 167 FMQAGWFEVDGLRLMISRSGYTGEDGFEISVANEHASDFARKLLSDARVKPIGLGARDSL 226 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206 R+ G+ D +T P +A + S + + G + + +KR I Sbjct: 227 RLEAGLCLYGHDMDEATS-PIEAALTWAVAKSRRERADFPGAARILKDIADKPAKKRVGI 285 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVH 260 G+ I + +G + V A+ R D + + + Sbjct: 286 ALKDRAPAREGTEIAVNGEVVGVVTSGGFGPTVGAPIAMGYVRTDLATPGTQVDLMVRGK 345 Query: 261 GVRVKASF 268 + Sbjct: 346 ARPAEVVK 353 >gi|86136100|ref|ZP_01054679.1| aminomethyl transferase family protein [Roseobacter sp. MED193] gi|85826974|gb|EAQ47170.1| aminomethyl transferase family protein [Roseobacter sp. MED193] Length = 818 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 13/147 (8%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A L + + + +L G+I L I ++ ED L Sbjct: 499 IEVAGPDAYALLDRLTANRMPQ-KVGSITLTHMLNRAGRIELETTIVRMAEDRLYLVCAA 557 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERF 120 L+D L ++ ++ I+ LS N + N+SF Sbjct: 558 FFEQRLLDHLEAHRDGADAIVTALSSTWGALSLNGPRSRDVLGACTDAALDNASFRWLSA 617 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHEL 147 + H+ W A ++ + Sbjct: 618 QKITIAGHKVWALRVSYAGELG-WELH 643 >gi|307307892|ref|ZP_07587617.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C] gi|306901508|gb|EFN32111.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C] Length = 379 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L+ ++ ADVL L R G IL +I D L ++ + +D+ Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129 Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113 + L L +I +Q P G VL W E + Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVTEADLHDV 187 Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 S I R R H + + + LR+ G+ D Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247 Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +T P +A ++ G + G + + R+R + + P Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAARILAELTDGVSRRR-VGLRPEGRAP 305 Query: 215 PSG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G + + D+ GT+ V G A+ + + + + + + Sbjct: 306 VRGNANLFADEEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365 Query: 265 KAS 267 + Sbjct: 366 AVT 368 >gi|89054677|ref|YP_510128.1| sarcosine oxidase alpha subunit family protein [Jannaschia sp. CCS1] gi|88864226|gb|ABD55103.1| sarcosine oxidase alpha subunit family [Jannaschia sp. CCS1] Length = 1009 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 31/75 (41%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A F+ + T + +L R + + G ++ ++ +++EDTF+ Sbjct: 675 STLGKIIVKGPDAPKFMDMLYTNMMSSLKPGKCRYGLMCSENGFLMDDGVVVRLDEDTFL 734 Query: 67 LEIDRSKRDSLIDKL 81 D + + Sbjct: 735 AHTTSGGADHVHAHM 749 >gi|294938730|ref|XP_002782170.1| Dimethylglycine dehydrogenase, putative [Perkinsus marinus ATCC 50983] gi|239893668|gb|EER13965.1| Dimethylglycine dehydrogenase, putative [Perkinsus marinus ATCC 50983] Length = 885 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S+ + V G A+ LQ + TA++ P +A+ G +L F + ++ ED Sbjct: 527 IDMSSFGKLIVKGHGALDLLQWVCTANIDR-PVGSIVYTAMANDLGGMLADFTVCRLGED 585 Query: 64 TFILEIDRSKRDSLIDKL 81 +F + ++ + + D L Sbjct: 586 SFYITTTSNQPEMIKDHL 603 >gi|304393092|ref|ZP_07375021.1| sarcosine oxidase subunit alpha [Ahrensia sp. R2A130] gi|303294857|gb|EFL89228.1| sarcosine oxidase subunit alpha [Ahrensia sp. R2A130] Length = 1007 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 23/211 (10%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62 V +S I + G A F+ I + LP AR +L G IL ++++ Sbjct: 673 VDVSTLGKIDIQGPDATEFINRIYSNAFAKLPVGKARYGLMLREDG-ILFDDGTTWRLDD 731 Query: 63 DTFILEIDRSKRDSLIDKLLFYK------LRSNVIIE--IQPINGVVLSWNQ-----EHT 109 +++ + +++ L +++ L V + GV ++ + Sbjct: 732 HRYLMTTTTAGAGLVMEHLEYHRDVVWPDL--KVALTSVTDEWAGVAVAGPKSRDLLAAC 789 Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIF 166 + D V G K+A + G D L + Sbjct: 790 VEDCDVSDTGLPFMGVRDGTIGGIPVKLARLSFSGEMAFEVYCGFTHGQAIWDALLAAGE 849 Query: 167 PH---DALMDLLNGISLTKGCYIGQEVVSRI 194 P ++ L + + KG G E+ R Sbjct: 850 PLGVTPYGLEALGTLRIEKGHVAGPELNGRT 880 >gi|2498527|sp|Q63342|M2GD_RAT RecName: Full=Dimethylglycine dehydrogenase, mitochondrial; AltName: Full=ME2GLYDH; Flags: Precursor gi|56689|emb|CAA39468.1| dimethylglycine dehydrogenase [Rattus norvegicus] Length = 857 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582 Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHT-----FSNSSF 115 F+L + + +R +V I I GV+ ++ Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642 Query: 116 IDE--------------------RFSIADVLLHRTWGHNEKIAS---------------D 140 D+ R S L + E A+ + Sbjct: 643 SDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDN 702 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ ++ T P +A +D I L K + G++ + +I+ + Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPADFTGKQALKQIKAK 759 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TDD+ P G+ + IG + A A ++ + Sbjct: 760 GLKRRLVCLTLATDDVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEVG 819 Query: 251 IKKGMALTVHGVRVKAS 267 + + L Sbjct: 820 QQVEVELLGKNYPATII 836 >gi|71411618|ref|XP_808051.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener] gi|70872174|gb|EAN86200.1| glycine cleavage T-protein, putative [Trypanosoma cruzi] Length = 373 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47 S+ F +V G F + + + V L + + + Sbjct: 54 SHVGFFEVRGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLA 113 Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86 +GKI+ + +++ + D ++E+DR S +++L K Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173 Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 R +V ++ I S++ E F I + ++LL + + + + Sbjct: 174 GRRSVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200 LR G+ + + + P A LM + + +G +IG E V R + + Sbjct: 230 SLRTEAGLCLYSHEL-SEEVNPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287 Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255 R R I++ + +G PIL D+ +G + V + +A+ ID+ + + Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETV 347 Query: 256 ALTVHGVRV--KASFP 269 L V G R+ + + P Sbjct: 348 ELEVRGKRLPGEVTLP 363 >gi|330979974|gb|EGH78244.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 735 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 400 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 459 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 460 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 519 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 520 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 578 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 579 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 636 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 637 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 687 >gi|260426340|ref|ZP_05780319.1| sarcosine dehydrogenase [Citreicella sp. SE45] gi|260420832|gb|EEX14083.1| sarcosine dehydrogenase [Citreicella sp. SE45] Length = 811 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 74/270 (27%), Gaps = 52/270 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A LQ I D+ P + +L +G I + + ED F + Sbjct: 493 LKGPDAESALQWICAGDIGG-PVGTLTYTQMLNDRGGIEADLTVLRRAEDEFYIVTGTGF 551 Query: 74 RDSLIDKLLF------------------------YKLR---SNVIIEIQPINGVVLSWNQ 106 D + + R + V + + Sbjct: 552 ATRDFDWIKRGIPKGANAQLIDVTSGHAVLSLMGPRARDILARVTRADLTNAALPFGTAR 611 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-----------------ELRI 149 + + + R S L E A+ H LR+ Sbjct: 612 QIAIAGAPVWALRVSYVGELGWELHMPVESAATVFDALHMAGASHGLVDAGYRAIETLRL 671 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G D P + P +A + + KG + G+E + + + +RK +T Sbjct: 672 EKGYRAWAGDIGPDST-PLEAGLGF--AVKPGKGEFRGREAIVAQKAKG-LRKMLATVTA 727 Query: 210 TDDLPPSG-SPILTDDIEIGTLGVVVGKKA 238 ++ G I + +G L G Sbjct: 728 APEVILLGRETIFRNGERVGYLSS--GGYG 755 >gi|254477430|ref|ZP_05090816.1| sarcosine oxidase, alpha subunit family [Ruegeria sp. R11] gi|214031673|gb|EEB72508.1| sarcosine oxidase, alpha subunit family [Ruegeria sp. R11] Length = 1010 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTWL 731 Query: 67 LEIDRSKRDSLIDKL 81 + + + Sbjct: 732 CHTTTGGAERIHGHM 746 >gi|3334197|sp|O49849|GCST_FLAAN RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|2894400|emb|CAA94902.1| T-protein [Flaveria anomala] Length = 407 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 36/80 (45%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK + FL+ ++ ADV L + +G + +I+K+ Sbjct: 79 SLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVT 138 Query: 62 EDTFILEIDRSKRDSLIDKL 81 +D L ++ RD + + Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158 >gi|330874745|gb|EGH08894.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1006 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 97/322 (30%), Gaps = 71/322 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTKQAIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967 Query: 240 AIARI-DKVDHAIKKGMALTVH 260 + RI ++V + G + Sbjct: 968 GLKRIGERVFAPLADGSVIEAE 989 >gi|327263078|ref|XP_003216348.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like [Anolis carolinensis] Length = 787 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 64/320 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + G ++ L + + + S +LTP+G++ +S + Sbjct: 452 IDLTPFGKFSIKGSDSVKLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHLRPG 509 Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLF--- 83 F+L I ++ KL Sbjct: 510 EFMLVTGSGSELHDLRWIEEEAIRGEYNVDIKNVTDEIGVLGIAGPYAREVLQKLTTEDL 569 Query: 84 ------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137 + L ++ I P+ + +S+ E + ER A + +E+ Sbjct: 570 SDAAFNFLLSRHLKIADIPVTAIRISYTGELGWE---LYHERKDSAALYSAIMEAGHERG 626 Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194 + TY + LR+ G + T P +A + I L K +IG++ + +I Sbjct: 627 IDNFGTYAMNTLRLEKGFRAWGAEMNCDT-NPLEAGLKYF--IKLNKPADFIGKQALKQI 683 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKV 247 + + + R+ + TD++ P G+ + D+ IG A A ++ Sbjct: 684 KEKGLERQLVYLTLKTDNVDPEGNESVWYDNKVIGNTTSGCYSYSTRQSLAFAYVPVELS 743 Query: 248 DHAIKKGMALTVHGVRVKAS 267 K + L Sbjct: 744 KVGQKMEVELLGEKYPATII 763 >gi|15966028|ref|NP_386381.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|15075298|emb|CAC46854.1| Probable dimethylglycine dehydrogenase [Sinorhizobium meliloti 1021] Length = 815 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 89/317 (28%), Gaps = 57/317 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S ++ G+ A +L IT V + +G+IL + IEED F Sbjct: 496 LPGFSRFRLKGEGAREWLSGPITGRVPK--PGRIGLAYFADDKGRILTEMSVMAIEEDFF 553 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------------NGVVL 102 L + + + L ++ ++ + + + Sbjct: 554 FLITAATAQWHDFEWLRKHR-PADAAFTLDDVTVKFACQILTGPKSRAILAEVSDADLAK 612 Query: 103 SWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143 W T + R S A L E A+ ++ Sbjct: 613 GWLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKVEDTAAVFDAVWDAGQKHGLKPFGMEA 672 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G D ++ + K + G+ + R + + + ++ Sbjct: 673 LDSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWAKPDFKGKAALEREKQQGVTKRF 729 Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256 + + D P S + + +G AL + R D + + Sbjct: 730 VTLTVEAGDCDAPYMSTLWSGGEVVGETTSGNWGYRTGKSIALGMLRADLAVPGQEVEVE 789 Query: 257 LTVHGVR--VKASFPHW 271 + + V+ P W Sbjct: 790 IFGDRFKAIVQPDQPLW 806 >gi|262196485|ref|YP_003267694.1| glycine cleavage system protein T [Haliangium ochraceum DSM 14365] gi|262079832|gb|ACY15801.1| glycine cleavage system T protein [Haliangium ochraceum DSM 14365] Length = 389 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 40/106 (37%), Gaps = 2/106 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A +Q ++T DV L A + + G I+ ++ + + ++ Sbjct: 59 SHMGEASLRGPRAAEAVQRLVTNDVGKLVDGAAMYTVMCYEHGGIVDDCIVYRRSAENYL 118 Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTF 110 + ++ + + + + L + V+ E + + + Sbjct: 119 IVLNAANTAKDLAWIREHAEPLGAEVVDESDDTALIAVQGPKAVAL 164 >gi|313202090|ref|YP_004040748.1| glycine cleavage t protein (aminomethyl transferase) [Methylovorus sp. MP688] gi|312441406|gb|ADQ85512.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. MP688] Length = 966 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 84/275 (30%), Gaps = 63/275 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A FL+ T T R + +L G ++ + +I ED F + Sbjct: 647 LEVRGPDAAEFLERFYTGSFKTQKIGRTRYALLLDEAGVMVDDGIACRIAEDYFYITAST 706 Query: 72 SKRDSLIDKLLFY-------------------------KLR---SNVIIEIQPINGVVLS 103 + ++ ++ + R S + + + Sbjct: 707 TNAAAVYREMQRWLQIWQLDVGLVNVTGAYGGINLAGPAARGILSKLTLRPLDDASLPF- 765 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + R + + + S ++ L + +G+ + F Sbjct: 766 --GAVCDTEIAGVPARLIRVGFVSDLAFEMHVPAGSAQHVWNAL-LENGVAEGLRPFGTD 822 Query: 164 T--------------------IFPHDALMDLLNGISLTKGCYIGQ---EVVSRIQHRNII 200 T P +A D I K +IGQ ++++R + Sbjct: 823 TQRLLRLEMGNHLIGQDTDGLTQPFEAGSD--GAIQFAKPFFIGQRSLQIIAR----KPL 876 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 KR + T ++ G I ++ IG G + G Sbjct: 877 NKRLVPFTLSEGY--QGETINECNLVIGADGNIKG 909 >gi|220914329|ref|YP_002489638.1| sarcosine oxidase subunit alpha family [Arthrobacter chlorophenolicus A6] gi|219861207|gb|ACL41549.1| sarcosine oxidase, alpha subunit family [Arthrobacter chlorophenolicus A6] Length = 980 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 91/281 (32%), Gaps = 62/281 (22%) Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 M + L I++ GK A FL + T L AR + G I + ++ Sbjct: 636 MDATTL---GKIEIRGKDAGEFLNRVYTNAFKKLAPGSARYGVMCLADGMIFDDGVTLRL 692 Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---------------------------KLR---SNV 90 +EDTF + ++D L + K R + V Sbjct: 693 DEDTFFMTTTTGGAAKVLDHLEEWLQTEWPELDVQCTSVTEQWNTIAVVGPKSREVIAKV 752 Query: 91 IIEIQPINGV------VLSWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134 E+ G+ +++ + S R S + L + TW Sbjct: 753 APELAANGGLDAENFPFMTFRETTLASGVRARVCRISFSGELAYEINVPAWYGLNTWESV 812 Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 ++ +T H LR G D T+ P DA M+ + +S K +IG Sbjct: 813 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FIG 868 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226 + SR+ + RK + + D P G+ ++ Sbjct: 869 KRSYSRVDAQREDRKHLVSVLPVDRTLRLPEGTQLVEKGRS 909 >gi|78357039|ref|YP_388488.1| glycine cleavage system T protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219444|gb|ABB38793.1| glycine cleavage system T protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 367 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 93/280 (33%), Gaps = 55/280 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A L ++T ++ TL R +L QG IL ++ + D ++L ++ + Sbjct: 66 LKGEGAREALSQVVTHNLATLAPGKCRYGFLLNEQGGILDDLIVYCLNTDEYMLVVNGAC 125 Query: 74 RDSLIDKLLFY---------KLRSNVIIEIQPINGVVL--------------SWNQEHTF 110 +S + + + + I++Q + + ++ T Sbjct: 126 TESDFEWIQSHMPATAVLDDVSSATAKIDLQGPESLNVLEKCFARDFRSLGYFGFEQVTL 185 Query: 111 SNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + I R ++ A +L + + + LR+ G+ Sbjct: 186 DGACVIVSRTGYTGELGYEFYLPWTKALMLWELLLQDSRVQPAGLGARDTLRLEVGLPLY 245 Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D + P +A + ++ YIG+ IR++ + + Sbjct: 246 GQDLDAAHT-PAEAGY---GMMLKSEAAYIGK------GKDTQIREQLIPLIIRGRRSAR 295 Query: 217 GSPILT--DDIEIGTLG------VVVGKKALAIARIDKVD 248 + I+T D E+G + V ALA + D Sbjct: 296 HNDIVTLPDGREVGVVTSGSFAPSVGSAVALAYINAEYAD 335 >gi|93005636|ref|YP_580073.1| glycine cleavage system aminomethyltransferase T [Psychrobacter cryohalolentis K5] gi|92393314|gb|ABE74589.1| aminomethyltransferase [Psychrobacter cryohalolentis K5] Length = 390 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS--KIEED 63 S+ + + G A +LQ ++ DV L A S +L +G I+ ++ +E Sbjct: 60 SHMVIVDIKGTDAKAWLQKLLANDVDKLKTAGKALYSPMLNEEGGIIDDLIVYLSNSDET 119 Query: 64 TFILEIDRSKRDSLIDKLLF 83 + + + + RD + + Sbjct: 120 EYRIVSNAATRDKDMAQFDK 139 >gi|56696446|ref|YP_166803.1| glycine cleavage system T protein, putative [Ruegeria pomeroyi DSS-3] gi|56678183|gb|AAV94849.1| glycine cleavage system T protein, putative [Ruegeria pomeroyi DSS-3] Length = 381 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G + Q I T ++ TLP +A+ P G ++ + ++ +D F Sbjct: 51 LSALRKFEITGPDSEALCQYIFTRNMKTLPVGGVVYTAMCYPHGGMIDDGTVFRLGKDNF 110 >gi|160899760|ref|YP_001565342.1| glycine cleavage system T protein [Delftia acidovorans SPH-1] gi|160365344|gb|ABX36957.1| glycine cleavage system T protein [Delftia acidovorans SPH-1] Length = 391 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G A L++++ DVL L R +L G IL + + E+D F+ Sbjct: 72 SHMGQISLRGPDAGAALESLLPMDVLGLGEHRQRYGLLLNDAGGILDDLMFVRREDDLFL 131 Query: 67 LEIDRSKRDSLI 78 + K + L Sbjct: 132 IVNGACKHEDLA 143 >gi|114794040|pdb|2GAH|A Chain A, Heterotetrameric Sarcosine: Structure Of A Diflavin Metaloenzyme At 1.85 A Resolution Length = 965 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 26/70 (37%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ GK A FL I T L R G I + ++ ED F+L Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGXGRYGVXCKADGXIFDDGVTLRLAEDRFLLHTTT 694 Query: 72 SKRDSLIDKL 81 ++D L Sbjct: 695 GGAADVLDWL 704 >gi|71736224|ref|YP_276853.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556777|gb|AAZ35988.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1006 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|320326401|gb|EFW82454.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320330614|gb|EFW86592.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330985878|gb|EGH83981.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011737|gb|EGH91793.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 1006 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|315103175|gb|EFT75151.1| glycine cleavage system T protein [Propionibacterium acnes HL050PA2] Length = 371 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 98/317 (30%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTW----------------GHNEKI 137 + R + + G + Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFNKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + +TG +G ++ +D +G + + +A+A +D I Sbjct: 286 DTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|289624811|ref|ZP_06457765.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330871158|gb|EGH05867.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 1006 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|298489214|ref|ZP_07007233.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156296|gb|EFH97397.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1006 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|224826871|ref|ZP_03699970.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002] gi|224600858|gb|EEG07042.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002] Length = 1005 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 54/268 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I + L R +L G ++ + + I +D F Sbjct: 671 STLGKIDIKGPDAREFLNRIYSNAWTKLDPGKCRYGLMLDENGMVMDDGVTACIADDHFY 730 Query: 67 LEIDRSKRDSLIDKLLFY--------KLR-----------------SNVI-------IEI 94 + +++ L + K+R S + I++ Sbjct: 731 MTTTTGGAARVLNWLERWHQTEWPELKVRFTSVTDHWSTTAVVGPKSRAVLQKLSSDIDL 790 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI--- 141 + W E T + R S + L H W + + Sbjct: 791 SADTFKFMDWR-EGTVAGVPARVCRISFSGELAYEINVDACYGHYIWEQVMEAGKEFGIT 849 Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G + D ++ P D M G+ ++G+ +SR Sbjct: 850 PYGTETMHVLRAEKGFIIVGQD-TDGSMSPIDLNMAWAVGMK-KPFSFLGKRSLSRSDTS 907 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + G+ IL+ Sbjct: 908 RSDRKQLVGLYTEDPKVVLAEGAQILSS 935 >gi|171056864|ref|YP_001789213.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix cholodnii SP-6] gi|170774309|gb|ACB32448.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix cholodnii SP-6] Length = 376 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 90/306 (29%), Gaps = 61/306 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A + +T +V L + + +L GK + +I + + F++ Sbjct: 58 VHVIGPHAEALINQAVTRNVSKLYPGKSVYACMLNEAGKFIDDCVIYRNGPNAFMVVHGA 117 Query: 72 SKRDSLIDK----LLFYKLRSNVIIEIQPINGVVLS----------------WNQEHTFS 111 + ++ + L + + + G + + + T Sbjct: 118 GQGHEILTRGAVGRNVAVLFDD-DLHDLSLQGPLAVEYLSRHVPGIRQLPYFHHLQTTLF 176 Query: 112 NSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINHGI- 153 + R + + + LR+ + Sbjct: 177 GRPVMISRTGYTGERGYELFCKAADAPTIWDTIVAEGKAMGIVPCAFTALDWLRVESCLL 236 Query: 154 --VDPNTDFLPSTIFPH-----DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 N+D P P + +D +S K + G + R R+R I Sbjct: 237 FYPYDNSDMYPMDGEPIGDTLWELGLDFT--VSPGKTEFRG----AAEHFRLQGRERFKI 290 Query: 207 I---TGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTV 259 + + +G + D ++G + + +++AIAR+D G L + Sbjct: 291 FGIELDSTEAAQAGDALYDGDTKVGFVTCGMYSRLSGRSMAIARMDTAYAV--PGRKLAL 348 Query: 260 HGVRVK 265 G + Sbjct: 349 RGAALN 354 >gi|281353469|gb|EFB29053.1| hypothetical protein PANDA_009045 [Ailuropoda melanoleuca] Length = 831 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 64/314 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS V G+ ++ L + + + S +LTP+G++ +S Sbjct: 498 IDLSPFGKFNVKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 555 Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLFYKL 86 F+L + ++ KL L Sbjct: 556 EFLLITGSGSELHDLRWIEEEAVNGGYNVEIKNITDELGVLGVAGPHARKVLQKLTTEDL 615 Query: 87 RSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137 +V + P+ + +S+ E + ++ ++ D +++ E+ Sbjct: 616 SDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDAIMN---AGQEEG 672 Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194 + TY + LR+ ++ T P +A ++ I L K +IG++ + +I Sbjct: 673 IDNFGTYAMNVLRLEKAFRAWGSEMNCDT-NPLEAGLEYF--IKLNKPADFIGKQALKQI 729 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKV 247 + + + R+ + TDD+ P G+ I D +G + A A ++ Sbjct: 730 KAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELS 789 Query: 248 DHAIKKGMALTVHG 261 + + L Sbjct: 790 KVGQQVEVELLGKN 803 >gi|289650612|ref|ZP_06481955.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. aesculi str. 2250] Length = 1006 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958 >gi|312794910|ref|YP_004027832.1| aminomethyltransferase [Burkholderia rhizoxinica HKI 454] gi|312166685|emb|CBW73688.1| Aminomethyltransferase (EC 2.1.2.10) [Burkholderia rhizoxinica HKI 454] Length = 413 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G A FL+ + ++ L A S +L G ++ ++ +D F Sbjct: 93 SHMCVVDIAGAGARAFLRMALANNIDKLQTPGRALYSCMLNASGGVVDDLIVYYFADDAF 152 Query: 66 ILEIDRSKRDSLIDKL 81 + ++ D I L Sbjct: 153 RVVVNAGTADKDIGWL 168 >gi|56751803|ref|YP_172504.1| glycine cleavage system aminomethyltransferase T [Synechococcus elongatus PCC 6301] gi|81301117|ref|YP_401325.1| glycine cleavage system aminomethyltransferase T [Synechococcus elongatus PCC 7942] gi|61213229|sp|Q5N136|GCST_SYNP6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123728131|sp|Q31KT1|GCST_SYNE7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|56686762|dbj|BAD79984.1| aminomethyltransferase [Synechococcus elongatus PCC 6301] gi|81169998|gb|ABB58338.1| aminomethyltransferase [Synechococcus elongatus PCC 7942] Length = 372 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 96/291 (32%), Gaps = 48/291 (16%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-----EDTFILEIDRSKRDSL 77 LQ ++ +D+ TL A+ S +L G L ++ E F++ ++ + DS Sbjct: 73 LQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLI-VNAATTDSD 131 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------ERF----------- 120 L + + ++++ +V + + RF Sbjct: 132 RLWLTEHLPPAIALLDLSQDLALVAIQGPQAIAFLQPLVSCDLAELPRFSHTVTSIAGQP 191 Query: 121 -------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161 A + L + + + LR+ + + Sbjct: 192 AFVARTGYTGEDGCEVMLPPAAAITLWQQLTAAGVVPCGLGARDTLRLEAAMPLYGHELD 251 Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221 T P +A + + + ++G++ + + + + R+ + ++ G P+ Sbjct: 252 TDT-NPLEAGLGWVVHLDRNPD-FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVA 309 Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 D +G + KA+A+A + + + + + + G +V A+ Sbjct: 310 IADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATV 360 Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP 35 + + + + G AI FLQ +++ D+ LP Sbjct: 151 DLALVAIQGPQAIAFLQPLVSCDLAELP 178 >gi|154346172|ref|XP_001569023.1| aminomethyltransferase, mitochondrial precursor [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066365|emb|CAM44156.1| putative aminomethyltransferase, mitochondrial precursor [Leishmania braziliensis MHOM/BR/75/M2904] Length = 377 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 30/254 (11%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL-------L 82 DV + + G+ +G + +E L+ + +++ + Sbjct: 124 DVAHMEEVLHEGAM----KG---ADVRLVPLERSLIALQGP--QAAAILSEFMDGVPDMD 174 Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 F R V I+ + + E F ++ + ++ ++LL R A D Sbjct: 175 FMHCRQKVKIKGMEVQVTRCGYTGEDGFEIAASDRDVATLVELLLSRKAELIGLGARDS- 233 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQEVVSRIQ---HRN 198 LR+ G+ + I P A LM ++ + +G +IG E + + + Sbjct: 234 ----LRLEAGLGLYGHEMT-EDINPVAARLMWTISKRRMEEGGFIGYEAIKNFRDNASKG 288 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254 + + + + T + + I D ++G + L A+ +D+ A Sbjct: 289 AVPRLRVGLVSTGPVAREKTVIEVDGKQVGEVTSGCPSPCLKKNIALGYVDRGLAAKGVK 348 Query: 255 MALTVHGVRVKASF 268 + L V G RV A Sbjct: 349 VDLVVRGRRVPAEV 362 >gi|48477575|ref|YP_023281.1| aminomethyltransferase [Picrophilus torridus DSM 9790] gi|48430223|gb|AAT43088.1| aminomethyltransferase [Picrophilus torridus DSM 9790] Length = 365 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 92/295 (31%), Gaps = 66/295 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISKI 60 S+ I + G A F D + + +A L GKI+ +I ++ Sbjct: 54 SHMGDIVIKGDDAAAF------CDYIFPGKISDMENGQCMYTAFLNNDGKIIDDTIIYRL 107 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------- 110 E F + + D + + + K V I+ N ++ + Sbjct: 108 SEKRFFFIPNAANIDRIYNWVNSNKNDYKVEIKNYSYNISHIAIQGPDSLKILDEMGIKY 167 Query: 111 ------------------SNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY- 144 ++S I + N E++ IK Y Sbjct: 168 PGEFKFNYHNTESYNDVSEDNSIIVSGTGYTGEIGVEIIVPNKDATILWEELIKKIKDYY 227 Query: 145 ---------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 LR+ G++ DF P++A + + + +IG+E + + + Sbjct: 228 GKPCGLGSRDTLRMEKGMLLSGQDFNEDRT-PYEASISFIINYNHD---FIGKEALIKNR 283 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246 + R I+ G + +P I+ ++ +G + + + + I K Sbjct: 284 NEYNEVFRGFILNGRN-IPRQNCDIIYNNKVVGRISSGSYSPSLNRGIGLGYIKK 337 >gi|148273381|ref|YP_001222942.1| putative aminomethyltransferase (glycine cleavage system T protein) [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831311|emb|CAN02267.1| putative aminomethyltransferase (Glycine cleavage system T protein) [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 406 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 70/194 (36%), Gaps = 29/194 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + I V G+ A FL +++ + + A+ + +L P G I+ ++ + E++F+ Sbjct: 66 SHMAEIAVEGEGAAAFLDSVLAGKLSAIAEWQAKYTLLLDPSGGIVDDLIVYRTGEESFL 125 Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ-------EHTFSNSS---- 114 + + D ++ L R +V ++ + +++ E T + Sbjct: 126 VVANAGNHDPVLAVLAEAAAGRDDVEVDDASDDVALIAVQGPVSRAILEATAGLETETPL 185 Query: 115 -------FIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDP--NT 158 RF+ DVL+ RT E + + L + G NT Sbjct: 186 EALRYYRATAARFAGQDVLVARTGYTGEDGYELYVATEDAVALWEAL-VAAGTPLGLLNT 244 Query: 159 DFLPSTIFPHDALM 172 +A M Sbjct: 245 GLACRDTLRLEAGM 258 >gi|63002613|dbj|BAD97818.1| subunit alpha of sarocosine oxidase [Corynebacterium sp. U-96] Length = 965 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ GK A FL + T L + R + G I + ++ ED F+ Sbjct: 630 STLGKIEIRGKDAAEFLNRMYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFL 689 Query: 67 LEIDRSKRDSLIDKL 81 + ++D L Sbjct: 690 MHTTTGGAADVLDWL 704 >gi|71041783|pdb|1VRQ|A Chain A, Crystal Structure Of Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 In Complex With Folinic Acid gi|71041933|pdb|1X31|A Chain A, Crystal Structure Of Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 gi|304445717|pdb|3AD7|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 In Complex With Methylthio Acetate gi|304445721|pdb|3AD8|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 In Complex With Pyrrole 2-Carboxylate gi|304445725|pdb|3AD9|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 Sarcosine-Reduced Form gi|304445729|pdb|3ADA|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium Sp. U-96 In Complex With Sulfite Length = 964 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ GK A FL + T L + R + G I + ++ ED F+ Sbjct: 629 STLGKIEIRGKDAAEFLNRMYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFL 688 Query: 67 LEIDRSKRDSLIDKL 81 + ++D L Sbjct: 689 MHTTTGGAADVLDWL 703 >gi|326677478|ref|XP_002665871.2| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Danio rerio] Length = 899 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 95/282 (33%), Gaps = 61/282 (21%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS +KV G + L ++ TLP + TP+G++ ++ + Sbjct: 568 IDLSPFGKMKVTGADSERLLDRLLAN---TLPKVKHTHTHKHTPRGRVYAELTVTHTQPG 624 Query: 64 TFILE------------IDRSKRD-------------------------SLIDKL----- 81 F+L I+R D +++ KL Sbjct: 625 EFLLITGSGSELHDLRWIEREAADGGYDVCVTNVTDEIGVLGIAGPKSRTVLQKLTSADL 684 Query: 82 -----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136 F + R IE+ + V ++D R A G +E Sbjct: 685 SESSFRFLQCR---TIELXXVCVCVCVCVCTGELGWELYMDMRNMSAVYQALMEAGRDEN 741 Query: 137 IASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR 193 I D TY + LR+ G + T P +A +D I L K +IG++ + Sbjct: 742 I-DDFGTYAMNSLRLEKGFRAWGAEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQALLE 797 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234 I+ + + R+ + TDD+ P G+ + + +G Sbjct: 798 IKAQGLSRRLAFLTLNTDDIDPEGNESVWHNGEVVGNTTSGS 839 >gi|241204812|ref|YP_002975908.1| glycine cleavage system aminomethyltransferase T [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858702|gb|ACS56369.1| glycine cleavage system T protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 378 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 52/283 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ + +++ Sbjct: 71 EDAALALESLVPVDILGLGEGRQRYGFFTDDTGCILDDLMIAHV-DDHLFVVVNAACKEA 129 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + + +I +Q V + + F+D R Sbjct: 130 DVAHLQAHISDQCDITVLDRALIALQGPRAVAVLAELWADVAAMKFMDVRHCRLHDVSCL 189 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A + R H + A + LR+ G+ D Sbjct: 190 VSRSGYSGEDGFEISIPSDKAVDVTKRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G G + G + R+R + + P G Sbjct: 250 TTS-PVEAALEWAMQKARRGSGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307 Query: 218 -SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHA 250 + + TD EIG + V G A+ ++ Sbjct: 308 HAKLYTDAEGKIEIGEVTSGGFGPSVEGPVAMGYVQLSHAAAG 350 >gi|126740173|ref|ZP_01755862.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] gi|126718628|gb|EBA15341.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter sp. SK209-2-6] Length = 811 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 87/317 (27%), Gaps = 66/317 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG-------------------KIL 52 I++ G FL + V +L G +I Sbjct: 490 IEITGTDRHSFLGRMFCTKVTQ-KPGRVGLGYLLNHHGMVKGEATLANLPASDRGPERIW 548 Query: 53 L----------------------YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90 I + D IL + + ++ + Sbjct: 549 YGSAAASELHDMDWLCQHIQPGEDVQIRSLTNDQTILVLAGPRARDVLSRAARGDWSRQA 608 Query: 91 I---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 I I P + +S++ E + + A L + Sbjct: 609 FPWLSARECFIGIAPATVLGVSFSGELAY-EIHVPNASLYAAYQALCEAGKEHGLQLFGA 667 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + +R+ G + D L P++ ++ + KG +IG+ + R + Sbjct: 668 RAVDSMRMEKGFLHWKADLLTE-FDPYETGLERF--VHPDKGDFIGKPALMEHLQRGPRK 724 Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKG 254 K + + +P G+ ++ + IGT+ G LA A +D I Sbjct: 725 KLVTLKIASTSMPAHGGASLMLGEEVIGTVTS--GDWGHRTGLNLAYAFVDPAQAEIGNT 782 Query: 255 MALTVHG--VRVKASFP 269 + L G V + P Sbjct: 783 LQLDACGERVPAEVIVP 799 >gi|255505305|ref|ZP_05345308.3| putative glycine cleavage system T protein [Bryantella formatexigens DSM 14469] gi|255268690|gb|EET61895.1| putative glycine cleavage system T protein [Bryantella formatexigens DSM 14469] Length = 343 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 69/295 (23%) Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKI 60 Y +++ I+V G A+ L+ + + L + + +LT PQ +I++ Sbjct: 34 YFTHR-LIEVTGADALVLLERLYPCRISKLDITKGKYTMLLTEEGIPQ----DDCVITRQ 88 Query: 61 EEDTFI---LEIDRSKR-------------DSLIDKLLFYKL---RSNVIIEIQPINGVV 101 E T+ L + R R + + K+ Y + R+ ++E + V Sbjct: 89 GETTYWISTLHVPRIMREMENASDGLDAKWEEITKKIDMYAVQGPRAEEMVE--QLLEVN 146 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTD 159 + + D I T +I D+K ++ + + Sbjct: 147 PHGQKRFQMVENRLGD--IQIKAAKGGYTGEKGYEIYCDVKDTEAVKQMLCAEVGKYGGE 204 Query: 160 FLPS---------------------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 F+ P + MD + I TK ++G++ V + + Sbjct: 205 FVDEFDVIAYTLATEAGLYLVTDFDDATPFETGMDWM--IDWTKEEFLGRDAVLAAKDQ- 261 Query: 199 IIRKRPMIITGTDDLP-----PSGSPILTDDIEIGTLG------VVVGKKALAIA 242 ++K+ + IT D P G+ + + EIG + V +A+ Sbjct: 262 PMKKKLVGITVDDPNVKVHGGPYGAVVSKNGKEIGRVTKFTYGFTVGKWVGMALI 316 >gi|257076373|ref|ZP_05570734.1| aminomethyltransferase [Ferroplasma acidarmanus fer1] Length = 368 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 14/176 (7%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G + ++ I + + L +A L P G ++ +I ++ + F Sbjct: 56 SHMGDIVISGPGSDNYVDYIFPSRISLLKNNECMYTAFLNPSGNMIDDTIIYRLSGEKFF 115 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126 L + S D + ++ K +V IE ++ + + F Sbjct: 116 LIPNASNIDKIYKWMIDNKKDYDVTIENYSNIISHIAVQGPKSVDVLKNLGMEFPEQFKF 175 Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST----IFPHDALMDLLNGI 178 L+ SD K Y+ + + I+ T + I P++ D+ N + Sbjct: 176 LY----------SDAKKYNAITGKNEIIISGTGYTGEKGVELIVPNELAADMWNSV 221 >gi|126737341|ref|ZP_01753076.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] gi|126721926|gb|EBA18629.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] Length = 367 Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 94/307 (30%), Gaps = 59/307 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67 +++ G A QAI D+ + + + +G ++ ++ K++ED F L Sbjct: 64 VQLKGPDAAKLAQAISARDLSKCQIGQGKYAPVCNYKGTVINDPVVMKLDEDLFWLSIAD 123 Query: 68 -------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108 D + ++ ++V+ E ++ + W +E Sbjct: 124 SDIWLWSTAIGAERGLDVEICDPGVSPMALQGPRAEEVVADVLGEW--VHNIRYFWFKET 181 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT----------------YHELRINHG 152 + +R + + + + + R G Sbjct: 182 QVEGIPIVVQRAGYSKQGGFEIYLRDSSKGTALWNIFKEAGQPYGIGPGSPQTAERTESG 241 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 ++ +D +T P + + I L G +G + +I R + ++ D Sbjct: 242 LLSVGSD-TDATTNPFEVRLGKFTDIDLE-GDVVGLPALRQISEAGPKRHQLGLVLEGKD 299 Query: 213 LPPSG---SPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV--HG 261 P G I D ++G + + A+ + G + V +G Sbjct: 300 PAPLGFTWDEIYKDGAKVGDMTNCIWSPRMKANIGYALI-----SADLMPGQEVAVVRNG 354 Query: 262 VRVKASF 268 V V A+ Sbjct: 355 VSVSANL 361 >gi|15965302|ref|NP_385655.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium meliloti 1021] gi|15074482|emb|CAC46128.1| Probable aminomethyltransferase (glycine cleavage system T protein) [Sinorhizobium meliloti 1021] Length = 379 Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L+ ++ ADVL L R G IL +I D L ++ + +D+ Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129 Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113 + L L +I +Q P G VL W E + Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVTEADLHDV 187 Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 S I R R H + + + LR+ G+ D Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247 Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +T P +A ++ G + G + + R+R + + P Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAGRILAELTDGVSRRR-VGLRPEGRAP 305 Query: 215 PSG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G + + D+ GT+ V G A+ + + + + + + Sbjct: 306 VRGNANLFADEEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365 Query: 265 KAS 267 + Sbjct: 366 AVT 368 >gi|18645112|gb|AAL76413.1| glycine cleavage system T protein, putative [uncultured marine proteobacterium] Length = 774 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + +CG A FL ++ + IA + L+ G+IL ++++ + Sbjct: 452 IDLTGFAKYDICGTDAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 510 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120 F L S +D L ++ S V I GV+ + + D Sbjct: 511 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 569 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + W ++ I LRIN+ + + + P AL D + G Sbjct: 570 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 623 Query: 181 TKG 183 +G Sbjct: 624 DQG 626 >gi|330993209|ref|ZP_08317146.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1] gi|329759760|gb|EGG76267.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1] Length = 377 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 66/320 (20%) Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ +++ G+ A L+ ++ AD++ L R + TP G I +++ + Sbjct: 54 SHMGQVRIRPKSGRNTDAARALETLVPADIVALRPGRQRYALFTTPDGGISDDLMVANMG 113 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 E +L ++ + + + + + + +E+ ++ + +S + R Sbjct: 114 E-WLLLVVNAACKQADFAHV--HAALAQTCTVEMLDGRALMALQGPAAEVALASL-NPRA 169 Query: 121 SIADVL-------------------------------------LHRTWGHNEKIASDIKT 143 + + + + + Sbjct: 170 AGMRFMDVVEMELAGMACIISRSGYTGEDGYEIGMASGDALTVARALLACPDVAPAGLGA 229 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQH 196 LR+ G+ D T P +A ++ G+ G Y G +V+ Sbjct: 230 RDSLRLEAGLCLYGADIDL-TTTPVEAALEWSIQKSRKPGGV--RAGGYPGAAIVADQLA 286 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKV 247 R+R + G+ + D+ +G + G A+ D Sbjct: 287 DGTTRRRVGLRAEGRAPVRGGTDLFADEAGAQPVGRVTSGAFGPSAGGPVAMGYVAADHA 346 Query: 248 DHAIKKGMALTVHGVRVKAS 267 + A+ + V+ S Sbjct: 347 GVGTRLFAAVRGRLLPVQVS 366 >gi|1346121|sp|P49363|GCST_FLAPR RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|438005|emb|CAA81077.1| T protein [Flaveria pringlei] Length = 407 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 37/80 (46%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + GK +PFL+ ++ ADV L + +G + +I+K+ Sbjct: 79 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVT 138 Query: 62 EDTFILEIDRSKRDSLIDKL 81 +D L ++ RD + + Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158 >gi|254462442|ref|ZP_05075858.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2083] gi|206679031|gb|EDZ43518.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium HTCC2083] Length = 799 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 100/311 (32%), Gaps = 64/311 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q + T ++ TL +A+ G ++ + ++ +D F Sbjct: 468 LSPLRKFEITGPDAEALCQYVFTRNMKTLAIGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 527 Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEH- 108 + + DKL + V ++ V + W H Sbjct: 528 RWIGGNDYGGEWIREQADKLGLKVM---VRSSTDQLHNVAVQGPESRDLLKKIVWTAPHN 584 Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE---- 146 S + F+ R L + H + A + + Sbjct: 585 PEFEQLEWFRHTPARLNDESGTPFVVSRTGYTGELGYEVMCHPKDCAEIWQAIWDAGQEH 644 Query: 147 ------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +RI G++ + DF T P +A + + +IG++ + R Sbjct: 645 GIKPMGLEALDMVRIEAGLIFADYDFSDQTD-PFEAGIGFTVPLKSKTDDFIGRDALIR- 702 Query: 195 QHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249 + ++ + + ++ G I +IG + + K +A+AR+D Sbjct: 703 -RKETPARKLVGLEIDSNVDVEHGDCIHVGRAQIGEVTSSMRSPLLGKNIAMARVDVAHS 761 Query: 250 AIKKGMALTVH 260 A+ G AL V Sbjct: 762 AV--GTALEVG 770 >gi|301382406|ref|ZP_07230824.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato Max13] gi|302061201|ref|ZP_07252742.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato K40] gi|302132427|ref|ZP_07258417.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 1006 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958 >gi|213967770|ref|ZP_03395917.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|213927546|gb|EEB61094.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato T1] Length = 1006 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958 >gi|183222533|ref|YP_001840529.1| glycine cleavage system aminomethyltransferase T [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912568|ref|YP_001964123.1| glycine cleavage system aminomethyltransferase T [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|259647539|sp|B0SQA1|GCST_LEPBP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|259647540|sp|B0SGN8|GCST_LEPBA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|167777244|gb|ABZ95545.1| Aminomethyltransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780955|gb|ABZ99253.1| Aminomethyltransferase (Glycine cleavage system T protein) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 370 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 87/293 (29%), Gaps = 54/293 (18%) Query: 7 SNQSFIKVCGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ I V G + FL+++ + T+ + +A++ G ++ + K + Sbjct: 51 SHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTK 110 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------- 111 +++ + S +++ LL Y ++ NV I N ++ + Sbjct: 111 YMICSNASNFEAVTQHLLKY-VKGNVSIANDSKNWHQIALQGPKADAIFTKYLGKDLSSI 169 Query: 112 -----------NSSFIDERFSIAD----------VLLHRTWGHNEKIASD-------IKT 143 + I R L W +I D + Sbjct: 170 LYYHFEEMNWRGETIIVSRTGYTGEDGFEIYTSNALGVTLWKELLEIGKDFGLVPVGLGA 229 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ + + P ++ ++ + + Y+G + + + K Sbjct: 230 RDTLRLEAKYPLYGHEL-NAEWTPVESGINFI--VKEKSKPYLGYDRIIADKKNGPKSKV 286 Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDH 249 + + PI D EIG LAI + + + Sbjct: 287 VGVRLLEPGVLRENFPIFAADGKEIGKTTSGTHSPSRKESLGLAILQTEFAKN 339 >gi|40063518|gb|AAR38318.1| oxidoreductase, FAD-binding [uncultured marine bacterium 581] Length = 805 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + L+ + +CG A FL ++ + IA + L+ G+IL ++++ + Sbjct: 483 IDLTGFAKYDICGTDAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 541 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120 F L S +D L ++ S V I GV+ + + D Sbjct: 542 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 600 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + W ++ I LRIN+ + + + P AL D + G Sbjct: 601 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 654 Query: 181 TKG 183 +G Sbjct: 655 DQG 657 >gi|317047927|ref|YP_004115575.1| glycine cleavage T protein [Pantoea sp. At-9b] gi|316949544|gb|ADU69019.1| glycine cleavage T protein (aminomethyl transferase) [Pantoea sp. At-9b] Length = 391 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 95/292 (32%), Gaps = 59/292 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + + +AD+ + + + +L G + + E + Sbjct: 47 SHMSIVSVVGDDAWSLVNHLASADISIIRDEQGIYTLLLNEDGSVWGDAYMLCTAE-GYY 105 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110 + + +I++L L + ++IQ I + QE Sbjct: 106 ILSESLSSGEVIERLKC-ILENREDLDIQEIPEINALEAQEWGAILLEGPYAWELLSEIY 164 Query: 111 --------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------- 142 ++ + R + G +K+ K Sbjct: 165 GFDIIGLPYHEYMNTDDGLMTFRCGRHGEFSYLVVGEQQKLVGVWKQLVDKGDKYQLKIA 224 Query: 143 --TYHEL-RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 Y ++ RI + D + + T P + M I K +IG+ V I Sbjct: 225 GLDYQQIVRIENPCWDASI-YQNYTRNPLELQMQW--AIQYDKESFIGKSAVEAFSRSGI 281 Query: 200 IRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARID 245 RK M + G D+ + S +L D +++G + A +A+A ID Sbjct: 282 ERKLVGIMPVAGCSDI-AADSKVLVDGVQVGVIVKGGYSPARQSYIALALID 332 >gi|221639104|ref|YP_002525366.1| Sarcosine oxidase subunit alpha family [Rhodobacter sphaeroides KD131] gi|221159885|gb|ACM00865.1| Sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides KD131] Length = 993 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 53/261 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + +LP + R + G ++ ++ ++ ED+++ Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVRRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95 D + + + + V I ++ Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139 + W E T + R S + L + + + Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D + IS K +IG+ + R + Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895 Query: 199 IIRKRPMII-TGTDDLPPSGS 218 R + + + T + P G+ Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916 >gi|119962346|ref|YP_949678.1| glycine cleavage system aminomethyltransferase T [Arthrobacter aurescens TC1] gi|119949205|gb|ABM08116.1| glycine cleavage system T protein [Arthrobacter aurescens TC1] Length = 373 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 20/116 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59 LS+ + V G A FL D + + A+ S I G I+ + + Sbjct: 50 LSHMGEVWVSGPDAAAFL------DYALVGKLSAIAVGKAKYSLICNADGGIIDDLISYR 103 Query: 60 IEEDTFILEIDRSKR----DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 ED +++ + +L+ + + +V++E +++ + Sbjct: 104 RAEDKYLVVPNAGNAKVVSAALLKRAAGF----DVVVEDVSAETSLIAVQGPTAEA 155 >gi|114570761|ref|YP_757441.1| glycine cleavage system T protein [Maricaulis maris MCS10] gi|114341223|gb|ABI66503.1| glycine cleavage system T protein [Maricaulis maris MCS10] Length = 365 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 101/304 (33%), Gaps = 47/304 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G A L+A++T D+ + + + + +G I ++S+ + + Sbjct: 54 SHMGQARYVGDEAA--LEALLTCDLSEIGAGEQKYTLLPNERGGIRDDLMVSRPDGNGIY 111 Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQP---------------------- 96 L ++ + +D+ + ++ ++ +Q Sbjct: 112 LVVNAATKDADFAHIEAATAGKGTLTRIPERALLALQGPAAKDVMARLCPQACKMVFMQC 171 Query: 97 ----INGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 ++GV + ++ F I + AD + +E A + LR+ Sbjct: 172 GLFTLDGVEVMMSRSGYTGEDGFEISIPEADADRIARLLLAQDEVAAIGLGARDSLRLEA 231 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G+ D + +L+ L +G + G +V++ +KR + +T T Sbjct: 232 GLCLYGHDMDENRTAVEASLIWALAKTRRERGDFPGADVIATQIEEKTCQKR-VGLTLTG 290 Query: 212 DLPPSGSPILT-DDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G+ I IG + V G A+ D+ A + + V G Sbjct: 291 APAREGAEIADKSGNIIGIVTSGGFGPTVSGPVAMGYV--DRDFMAPGTEVDILVRGKPR 348 Query: 265 KASF 268 A Sbjct: 349 AAII 352 >gi|13473169|ref|NP_104736.1| aminomethyltransferase [Mesorhizobium loti MAFF303099] gi|14023917|dbj|BAB50522.1| aminomethyltransferase [Mesorhizobium loti MAFF303099] Length = 419 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 57/273 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A FL + DV L +A +G +L + ++ F L Sbjct: 88 RIEGPDAEAFLDRVTLRDVTRLRPGRVHYTAWCDDEGFVLDDGTLFRLSPTRFRLCSQER 147 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111 L+D + + +V +E + L+ +F+ Sbjct: 148 HLPWLLDSAIGF----DVTVEEETEAVAGLALQGPTSFAVLREAGFAGVEKLKVFDLADF 203 Query: 112 ---NSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTYHELRINH 151 +++ I R L + + +K A + R+ Sbjct: 204 PHDDTTVIISRTGFTGDLGYELFVPADKALSLWDRLMTAGELRGIRAVGYTALNRARLEA 263 Query: 152 GIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G++ N DF + P + + + I K + G+ V + + +R Sbjct: 264 GLIVANADFTTAGHAIRADRLRKPDEIGLGFM--IDPEKTHFNGRRAVLEARAKRKLRHV 321 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 + + ++P + + + +G+V G Sbjct: 322 LVGLEIEGNIPAEHAMVYH--KKHQEVGLVSGA 352 >gi|301769829|ref|XP_002920333.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like [Ailuropoda melanoleuca] Length = 866 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 64/314 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS V G+ ++ L + + + S +LTP+G++ +S Sbjct: 532 IDLSPFGKFNVKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 589 Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLFYKL 86 F+L + ++ KL L Sbjct: 590 EFLLITGSGSELHDLRWIEEEAVNGGYNVEIKNITDELGVLGVAGPHARKVLQKLTTEDL 649 Query: 87 RSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137 +V + P+ + +S+ E + ++ ++ D +++ E+ Sbjct: 650 SDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDAIMN---AGQEEG 706 Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194 + TY + LR+ ++ T P +A ++ I L K +IG++ + +I Sbjct: 707 IDNFGTYAMNVLRLEKAFRAWGSEMNCDT-NPLEAGLEYF--IKLNKPADFIGKQALKQI 763 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKV 247 + + + R+ + TDD+ P G+ I D +G + A A ++ Sbjct: 764 KAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELS 823 Query: 248 DHAIKKGMALTVHG 261 + + L Sbjct: 824 KVGQQVEVELLGKN 837 >gi|50842231|ref|YP_055458.1| glycine cleavage system aminomethyltransferase T [Propionibacterium acnes KPA171202] gi|59797725|sp|Q6A9R6|GCST_PROAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|50839833|gb|AAT82500.1| glycine cleavage system protein T [Propionibacterium acnes KPA171202] gi|315107064|gb|EFT79040.1| glycine cleavage system T protein [Propionibacterium acnes HL030PA1] Length = 371 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 98/317 (30%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTW----------------GHNEKI 137 + R + + G + Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + +TG +G ++ +D +G + + +A+A +D I Sbjct: 286 DTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|284991325|ref|YP_003409879.1| sarcosine oxidase subunit alpha family protein [Geodermatophilus obscurus DSM 43160] gi|284064570|gb|ADB75508.1| sarcosine oxidase, alpha subunit family [Geodermatophilus obscurus DSM 43160] Length = 955 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 55/266 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A L + T + +L R + G ++ + ++ ED F+ Sbjct: 618 STLGKIDVQGPDAAVLLDRLYTNLMSSLKVGSVRYGVMCGVDGMVIDDGTVLRLAEDRFL 677 Query: 67 LEIDRSKRDSLIDKLLFYK------LR--------------------SNVI------IEI 94 + ++D + + LR +V+ +++ Sbjct: 678 VLTTTGGAAKILDWMEEWAQTEWPDLRVHCTSVTEQWVTFPVVGPRSRDVVGAVFPHVDV 737 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------- 139 ++W + T R S + L + + + + Sbjct: 738 SAEAFPFMTWR-DTTLDGVPVRLARISFSGELAYEVYVNPWYAVAVWQRLLDAGRPYGIT 796 Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G D T+ PHD M +S K ++G+ +R + Sbjct: 797 PYGTETMHVLRAEKGYPIIGQD-TDGTVTPHDLGMAW--AVSKKKPDFVGKRSFARPANA 853 Query: 198 NIIRKRPMIITGTD--DLPPSGSPIL 221 + +RK+ + + D + P GS I+ Sbjct: 854 DPLRKQLVGLLPVDRQTVLPEGSQII 879 >gi|314923261|gb|EFS87092.1| glycine cleavage system T protein [Propionibacterium acnes HL001PA1] Length = 371 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 96/317 (30%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAMKIVLAALQKGNTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ +D +G + + +A+A +D I Sbjct: 286 DTTADRVLVGVAGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|282854272|ref|ZP_06263609.1| aminomethyltransferase [Propionibacterium acnes J139] gi|282583725|gb|EFB89105.1| aminomethyltransferase [Propionibacterium acnes J139] gi|314967027|gb|EFT11126.1| glycine cleavage system T protein [Propionibacterium acnes HL082PA2] gi|314980984|gb|EFT25078.1| glycine cleavage system T protein [Propionibacterium acnes HL110PA3] gi|315091643|gb|EFT63619.1| glycine cleavage system T protein [Propionibacterium acnes HL110PA4] gi|315093051|gb|EFT65027.1| glycine cleavage system T protein [Propionibacterium acnes HL060PA1] gi|327327847|gb|EGE69623.1| glycine cleavage system T protein [Propionibacterium acnes HL103PA1] Length = 371 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 96/317 (30%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKGNTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ +D +G + + +A+A +D I Sbjct: 286 DTTADRVLVGVAGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|254466550|ref|ZP_05079961.1| aminomethyltransferase [Rhodobacterales bacterium Y4I] gi|206687458|gb|EDZ47940.1| aminomethyltransferase [Rhodobacterales bacterium Y4I] Length = 378 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 68/306 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G A + T +V + + + +L GK + +I ++ +++++ Sbjct: 59 VHIVGPHASHVIDRATTRNVEKIKPGRSTYACMLNDDGKFVDDCVIYRMGPNSWMVVHGS 118 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP-----------------------INGVVLSWNQEH 108 + ++L +V I I VV + Sbjct: 119 GQG---HEQLTMAAQGRDVDIRFDDNLHDISLQGPLAVDFLEEQGVPGIRDVVYFSHIHT 175 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP-------NTDFL 161 T + R + + + + L + G D L Sbjct: 176 TLFDKPVTISRTGYTGERGYEIFCRGQDAPH---IWDNL-VEKGAPMGIIPTRFTTLDLL 231 Query: 162 PSTIFPHDALMDLLN----------------GISLT----KGCYIGQEVVSRIQHRNIIR 201 + + D G+ T K + G E R++ + + Sbjct: 232 RAESYLLFFPFDNSEMYPFENEKCGDTLWELGLDFTVSPGKTGFRGAEEHYRLKGKERFK 291 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGM 255 + + GT+ G+P+L D ++G + + +A +D + GM Sbjct: 292 IYGVKLEGTEP-AEEGAPLLRDGKQVGVVTIGMYSPLNEHNVGIARMPVDCAE----PGM 346 Query: 256 ALTVHG 261 LTV Sbjct: 347 PLTVKN 352 >gi|209551592|ref|YP_002283509.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537348|gb|ACI57283.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 816 Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 80/278 (28%), Gaps = 56/278 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 + G+ A L I + DV P + +L +G I +++I ED + + Sbjct: 496 LKGRDAEAALSWIASNDVAR-PVGSLIYTQMLNDKGGIECDLTVARIAEDEYYIVTGTGF 554 Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106 I L+D Y + R+ V ++ + Q Sbjct: 555 ATHDFNWIARNIPAEMHAELVDVTSSYCVLSLMGPNARAVLEKVTGS--DVSNAAFPFGQ 612 Query: 107 EHT--FSNSSFIDERFSIADVLLHRT-----------------WGHNEKIASDIKTYHEL 147 T S R + L + G + + + Sbjct: 613 VRTIGISGCPVRALRITYVGELGYELHVPIEYATTVYDLLMASGGKLGLVNAGYRAIESC 672 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ G +D P P +A + + + K + G+E + R + ++ Sbjct: 673 RLEKGYRAWGSDIGPDHT-PVEAGLGW--AVKIRKSIPFRGREAIERQLKEGVKKRLACF 729 Query: 207 ITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALAIAR 243 + D G I + +G L G + + Sbjct: 730 VPEDPDTVLLGRETIYRNGKRVGWLSS--GGFGYTLGK 765 >gi|83952528|ref|ZP_00961259.1| putative oxidoreductase protein [Roseovarius nubinhibens ISM] gi|83836201|gb|EAP75499.1| putative oxidoreductase protein [Roseovarius nubinhibens ISM] Length = 791 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 84/278 (30%), Gaps = 44/278 (15%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + + LS + I + G + L + TA + +P A S IL P+G I + +S++ Sbjct: 469 ALIDLSPFTKIDLRGPNVAQALNDLCTAQMD-VPLGRAIYSQILNPRGGIEMDVTVSRLA 527 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------- 110 ED F + + R + L L S V + + L Sbjct: 528 EDHFHITSGAATRARDLAYLRR-ALPSAVTLTDRTEAYCTLGVMGAGAAHMLRAWDADTA 586 Query: 111 ----SNSSFID-------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147 D R + + W + + + L Sbjct: 587 WAAAPLGELRDLLIDGHRARATRISFVGEYGWELTLPNSIAPRVFDRLYTAGARPLGHFA 646 Query: 148 ----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 RI G D P+ I P +A + I K + G+E ++ Q + + R+ Sbjct: 647 LDGCRIEKGFKHWGHDLSPA-ITPLEAGLGFT--IDWRKS-FTGKEALAAQQSQGLRRRL 702 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 ++ L P+ +G + Sbjct: 703 LLLQVTGAPLLLHDEPVFEAGRHVGFTTSGARGPRTGL 740 >gi|149374584|ref|ZP_01892358.1| sarcosine dehydrogenase [Marinobacter algicola DG893] gi|149361287|gb|EDM49737.1| sarcosine dehydrogenase [Marinobacter algicola DG893] Length = 856 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + LS+ + + G A L+ + A V T+P+ + L +G I I + + Sbjct: 511 INLSHFAIFDISGDDAETLLEYLSVAKVGGTIPHGKGVYTHFLDARGGIRSDLTIIRRGD 570 Query: 63 DTFILEI 69 + + + Sbjct: 571 NDYRVVC 577 >gi|302555895|ref|ZP_07308237.1| sarcosine oxidase oxidoreductase [Streptomyces viridochromogenes DSM 40736] gi|302473513|gb|EFL36606.1| sarcosine oxidase oxidoreductase [Streptomyces viridochromogenes DSM 40736] Length = 1079 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 85/291 (29%), Gaps = 60/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TL + R + P G + + ++ D F Sbjct: 745 STLGKIDVQGPDADVFLDLLYTNMMSTLKVGMIRYGVMCRPDGMVFDDGTVIRLARDRFT 804 Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQE------------- 107 + +++D + + +LR + + V L + Sbjct: 805 VTTTTGNAAAVLDWMEEWLQTEWPELRVHCTSVTEQWATVALVGPKSREVLGLLAPRLAV 864 Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146 F ++ D + D + R E + + Sbjct: 865 ANDDFPFMAWRDTTVAGIDARVCRISFSGELAYEINVSPWEALTLWEALHEAGAPYGITP 924 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G D T+ P D M+ + +S K +IG+ +R Sbjct: 925 YGTETMHVLRAEKGYPIVGQD-TDGTVTPQDLGMNWV--VSKKKRDFIGKRSYARADTAR 981 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDI-------EIGTLGVVVGKKALA 240 RK + + D P G+ ++ + +G + AL Sbjct: 982 PDRKHLVGLLPEDPGTFLPEGTHLVAGGVLPEPPVPMLGHVTSSYRSAALG 1032 >gi|319427660|gb|ADV55734.1| glycine cleavage system T protein [Shewanella putrefaciens 200] Length = 364 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A S +L I+ + + + + Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + R+ + + ++ + +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDITVTERPELAMIAVQGPNAKAKAAAV 159 >gi|126435080|ref|YP_001070771.1| FAD dependent oxidoreductase [Mycobacterium sp. JLS] gi|126234880|gb|ABN98280.1| FAD dependent oxidoreductase [Mycobacterium sp. JLS] Length = 830 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 56/266 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A FLQ + T ++ + +L G I ++++ TF + + Sbjct: 523 EVAGPGAAAFLQRMTTNNIDK-SVGSVTYTLMLDEAGGIRSDLTVARLGPTTFQV---GA 578 Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSFID---- 117 D L ++ +V++ +I + W + S+++F Sbjct: 579 NSPRDFDWLDRHR-PDDVVLRDITGGTCCIGVWGPLARDMVQPLCKDDLSHNAFRYFRAL 637 Query: 118 -----------ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHELRI 149 R S L + + IA+ ++ LRI Sbjct: 638 RTYLGALPVTMMRVSYVGELGWEIYTSADYGGALWDLLFEAGRDHGVIAAGRVAFNSLRI 697 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G TD P +A +D + + KG ++G+ + ++ +K I Sbjct: 698 EKGYRSWGTDMTTEH-RPAEAGLDF--AVRMDKGDFVGR---AALEQAPPPQKTLRSIVF 751 Query: 210 TDDLPP--SGSPILTDDIEIGTLGVV 233 D P+ +G + Sbjct: 752 DDPAAVVLGKEPVYAAGDCVGYVTSA 777 >gi|108799426|ref|YP_639623.1| FAD dependent oxidoreductase [Mycobacterium sp. MCS] gi|119868539|ref|YP_938491.1| FAD dependent oxidoreductase [Mycobacterium sp. KMS] gi|108769845|gb|ABG08567.1| FAD dependent oxidoreductase [Mycobacterium sp. MCS] gi|119694628|gb|ABL91701.1| FAD dependent oxidoreductase [Mycobacterium sp. KMS] Length = 830 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 84/266 (31%), Gaps = 56/266 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A FLQ + T +V + +L G I ++++ TF + + Sbjct: 523 EVAGPGAAAFLQRMTTNNVDK-SVGSVTYTLMLDEAGGIRSDLTVARLGPTTFQV---GA 578 Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSFID---- 117 D L ++ +V++ +I + W + S+++F Sbjct: 579 NSPRDFDWLDRHR-PDDVVLRDITGGTCCIGVWGPLARDMVQLLCKDDLSHNAFRYFRAM 637 Query: 118 -----------ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHELRI 149 R S L + + IA+ ++ LRI Sbjct: 638 RTYLGALPVTMMRVSYVGELGWEIYASADYGGALWDLLFEAGRDHGVIAAGRVAFNSLRI 697 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G TD P +A +D + +G ++G+ + ++ R+ I Sbjct: 698 EKGYRSWGTDMTTEH-RPAEAGVDF--AVRTDRGDFVGR---AALEQAPPPRRTLRSIVF 751 Query: 210 TDDLPP--SGSPILTDDIEIGTLGVV 233 D P+L D +G + Sbjct: 752 DDPAAVVLGKEPVLLDGTCVGYVTSA 777 >gi|255324157|ref|ZP_05365280.1| glycine cleavage system T protein [Corynebacterium tuberculostearicum SK141] gi|255298783|gb|EET78077.1| glycine cleavage system T protein [Corynebacterium tuberculostearicum SK141] Length = 370 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 60/312 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A FL ++ L A+ S I G I+ + + EED F Sbjct: 51 LSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDKF 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF------------ 110 ++ + D++ D+L R+ +V ++ + + +++ Sbjct: 111 LVVPNAGNADTVWDELNN---RAEGFDVTLKNESRDVAMIAVQGPKAAEILVPLVEDNKQ 167 Query: 111 ----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD---- 140 + + I R + W K ++ Sbjct: 168 DEVYNLGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGAEYDLK 227 Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + LR+ G+ + I P +A M + + ++G EV+ R + Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMAR--AFAKKEADFVGAEVI-RQRAA 283 Query: 198 NIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 + +T T +G+ + D ++GT+ L V A+ + A Sbjct: 284 EGPQVAITGLTSTQRRAARAGAEVFVGDKKVGTVTSGQPSPTLGH----PVAIALLETSA 339 Query: 257 LTVHGVRVKASF 268 G V+ Sbjct: 340 GLEPGAEVEVEI 351 >gi|13471519|ref|NP_103085.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099] gi|14022261|dbj|BAB48871.1| probable dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099] Length = 803 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 60/303 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G SA +L ++ AR + +L P G++ + + + L Sbjct: 491 SVSGPSARAWLDRLLAC--RLPKAGQARLAPMLGPDGRLKGDLTVINWGDGDYWLMGSYY 548 Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSFID---------- 117 R+ + +++ R+ + + I+ + N ++ D Sbjct: 549 LREF---HMRWFETRAGEGVTVTDISDATGGFLLTGPNARKILERTTHQDVSSAALPFMA 605 Query: 118 -------------ERFSIADVLLHR--------------TWGHNEKIASDIKTYHEL--- 147 R SIA L E + Y+ L Sbjct: 606 CGAFDIGMVQARLARLSIAGELGFEINCPVTMHAALRETLLAAGEDLGLAEIGYYALNSL 665 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ + +F +D I+ KG ++G+E + + ++ + Sbjct: 666 RLEKSFGIWSREFTQG-YTSRQTGLDRF--IAFDKGDFVGREAALKERDTGTAQRIVTLE 722 Query: 208 TGTDDLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262 D SG P+ D +G + +++A+A +D ++G AL+VH V Sbjct: 723 INALDADASGFEPVWRDGRRVGFVTSGGFGYTIGRSVALALVD--GDFAEEGTALSVHIV 780 Query: 263 RVK 265 V+ Sbjct: 781 GVE 783 >gi|327265707|ref|XP_003217649.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Anolis carolinensis] Length = 407 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 90/301 (29%), Gaps = 62/301 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK + FL++++ D+ L S G I+ +++ ED + + Sbjct: 92 KVFGKDRVKFLESLVVGDIAELKPNQGTLSLFTNENGGIIDDLIVTSTSEDHLYVVSNAG 151 Query: 73 KRDS----LIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117 + + +K K S+V +E+ + L S D Sbjct: 152 CMEKDFALMQNKAKEMKASGSDVHLEVSENALLALQGPAMSQVLQSGVNDSLAKMPFMSS 211 Query: 118 ---ERFSIADVLLH-----------------RTWGHNEKIASDIKTYHE-------LRIN 150 F + + R E + + + LR+ Sbjct: 212 AAMAVFGVQGCRVTRCGYTGEDGVEISVPASRVVELAELLLKNPTVWLAGLAARDSLRLE 271 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRIQHRNIIRKRP 204 G+ D + P +A + G + G ++ Q + +++ Sbjct: 272 AGLCLYGNDI-DESTTPVEASLVWTLGKRRRVAMDF-----PGASIIL-AQIKEKPKRKR 324 Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259 + +T PIL D IG + L A+ ++ K G +LTV Sbjct: 325 VGLTSIGPPIRQHVPILGPKDKAIGEITSGCPSPCLQKNVAMGYVE--SEYSKVGTSLTV 382 Query: 260 H 260 Sbjct: 383 E 383 >gi|306836535|ref|ZP_07469505.1| glycine cleavage system T protein [Corynebacterium accolens ATCC 49726] gi|304567559|gb|EFM43154.1| glycine cleavage system T protein [Corynebacterium accolens ATCC 49726] Length = 370 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 107/317 (33%), Gaps = 79/317 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL + I+ + +L A+ S I G I+ + + EE+ Sbjct: 51 LSHMGEIWVNGPDAGKFLSYSFISN-LDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110 F++ + D++ D+L R+ +V ++ + + +++ Sbjct: 110 FLVVPNAGNADTVWDELNK---RAEGFDVELKNESRDVAMIAVQGPKAAEILVPLVEDNK 166 Query: 111 -----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD--- 140 + + I R + W K ++ Sbjct: 167 QEAVYELGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWDELLKAGAEYDI 226 Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LR+ G+ + I P +A M + + ++G EV Sbjct: 227 KPCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMSR--AFAKKEADFVGAEV------ 277 Query: 197 RNIIRKRP-----MIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIAR 243 IRKR ++I+G + + + +D ++GT+ L AIA Sbjct: 278 ---IRKRAEEGPQVVISGLTSDQRRAARADAEVFLNDTKVGTVTSGQPSPTLGHPVAIAL 334 Query: 244 IDKVDHAIKKGMALTVH 260 +D ++ G A+ V Sbjct: 335 LD-TSAELEPGTAVEVE 350 >gi|224026155|ref|ZP_03644521.1| hypothetical protein BACCOPRO_02911 [Bacteroides coprophilus DSM 18228] gi|224019391|gb|EEF77389.1| hypothetical protein BACCOPRO_02911 [Bacteroides coprophilus DSM 18228] Length = 361 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 52/306 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ F+Q + + + L + + G I+ L+ E + ++L ++ + Sbjct: 56 VKGPHALEFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYAYEPEKYMLVVNAAN 115 Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94 + + + KL L + E+ Sbjct: 116 IEKDWNWCVSHNQVGAELENSSDHIGQLAVQGPKALATLQKLTSVDLSAIPYYTFCTGEL 175 Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 + V++S + F + + +I D + R + LR+ Sbjct: 176 AGVKNVIISNTGYTGAGGFELYFYPQDAMTIWDA-VFRAGEEFGIKPIGLGARDTLRLEM 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D T P +A + + K + + + R + + RK Sbjct: 235 GFCLYGNDI-DDTTSPLEAGLGWITKFVDGKN-FTNRAALERQKAEGVTRKLVGFEMIDR 292 Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264 +P G + + EIG + + + + + + ++ Sbjct: 293 GIPRHGYTLTDAEGNEIGHVTSGTMSPIRKIGIGMGYVKAEYAKPGTEIWLDNRGRKLKA 352 Query: 265 KASFPH 270 + P Sbjct: 353 QVVKPP 358 >gi|126697216|ref|YP_001092102.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9301] gi|166221560|sp|A3PFH6|GCST_PROM0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|126544259|gb|ABO18501.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9301] Length = 370 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 95/306 (31%), Gaps = 54/306 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63 S+ I V G + ++Q ++ + + +L +G I+ +I + E D Sbjct: 51 SHMGVISVKGINPKDYIQKFFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110 Query: 64 --TFILEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQP--INGVVLSWNQEH 108 +L ++ S+ + + +K ++ V++ +Q + W Sbjct: 111 ITELLLIVNASRYEEDFQWIKNNLNKDEISITNFK-KAKVLLALQGKKSFDLFEEWIDSS 169 Query: 109 TFSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY----------- 144 +F I + FS + I + Sbjct: 170 ISHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVAPC 229 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 LR+ G+ D T P++A + L + + G+ + I Sbjct: 230 GLGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGI 287 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGM 255 +K + + G +L + IGT+ +A+A A I+ I + Sbjct: 288 QKKLVGLFIEGKAIGRKGCTVLKGEENIGTITSGSWSPTKQQAIAFAYINTSHALINNEV 347 Query: 256 ALTVHG 261 + + G Sbjct: 348 QVLIRG 353 >gi|20804063|emb|CAD31640.1| PROBABLE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN [Mesorhizobium loti R7A] Length = 988 Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+VCGK A FL + + L LP AR +L G I S++ +D F + Sbjct: 658 IEVCGKDAAEFLNRVYSNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLADDRFFMTTTT 717 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 718 AYAAGVMTHLEF 729 >gi|331696369|ref|YP_004332608.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326951058|gb|AEA24755.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190] Length = 370 Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 55/306 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++ G A L + + + A+ S + P G +L ++ ++ +D F Sbjct: 54 LSHMGEVEFVGPQAAEALDHALAGKLSAVQVGRAKYSLLCAPDGGVLDDLVVYRLADDRF 113 Query: 66 ILEIDRSK----RDSLIDKLLFY-----------------------KLRSNVIIEIQPIN 98 ++ ++ S LI + + LRS + Sbjct: 114 LVVVNASNAAQDAAELISRAKGFDVDVTDRAAETALIAVQGPRSPDVLRSAEPGVASILE 173 Query: 99 GVVLSWNQEHTFSNSS-----------------FIDERFSIADVLLHRTWGHNEKIASDI 141 G+ ++ T DE L G + + + Sbjct: 174 GLRYYASEPATIGGIDVLLARTGYTGEDGFELYVPDEHAPALWNTLLAAGGQHALHPAGL 233 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ + + P A + + + ++G++ ++ + Sbjct: 234 ACRDTLRLEAGMALYGHELT-AETNPFAAGLRRVVALDKE---FVGRDTLA-ALAEDEPA 288 Query: 202 KRPMIITGTDDLP--PSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 + +TGT + + DD +G + V L A+A ID+ + + Sbjct: 289 RVLAGLTGTGRRAGRAGATVLGADDAPVGVVTSGVLSPTLGVPIALAYIDRGLSEVGTEL 348 Query: 256 ALTVHG 261 + V G Sbjct: 349 RVDVRG 354 >gi|260220917|emb|CBA28964.1| Aminomethyltransferase, mitochondrial [Curvibacter putative symbiont of Hydra magnipapillata] Length = 386 Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 3/106 (2%) Query: 7 SNQSFIKVCGKSA-IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ +++ G A F ++++ DV+ LP R +LT +G I+ + K +D Sbjct: 57 SHMGQLRLSGPDACAAF-ESLMPVDVIDLPLGKQRYGLLLTIEGTIIDDLMFFKKAQDEL 115 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 + ++ + + I + K+ S + P ++ + + Sbjct: 116 FVIVNGACKVGDIAHIQA-KIGSRCQVTPLPDYALLALQGPQAVTA 160 >gi|255530320|ref|YP_003090692.1| glycine cleavage system aminomethyltransferase T [Pedobacter heparinus DSM 2366] gi|255343304|gb|ACU02630.1| glycine cleavage system T protein [Pedobacter heparinus DSM 2366] Length = 359 Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 52/281 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G++A+ +Q + + D L + S + G I+ L+ +I+E T++L ++ S Sbjct: 56 LKGENALDLIQRVTSNDASKLYDGKVQYSCLPNENGGIVDDLLVYRIDELTYMLVVNASN 115 Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD-------- 124 + + + + R V + I ++ + + S D + D Sbjct: 116 IEKDWNWIQKFNTR-GVEMHNISDKTSLLAIQGPKAAEALQSLTDVDLASMDYYNFVKGK 174 Query: 125 ----------VLLHRTWGHNEKIASDIKT---YHE--------------------LRINH 151 + G E + ++ LR+ Sbjct: 175 FAGVDNVLISATGYTGAGGFEIYFDNEHADAIWNAIFEAGKPFNIKPIGLGARDTLRLEM 234 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G D T P +A + + +K + E + + + RK Sbjct: 235 GFCLYGNDIDDHTS-PIEAGLGWI--TKFSK-IFTNSEALLAQKEAGVARKLVGFEMIDR 290 Query: 212 DLPPSGSPILTDDIEI-GTLGVVVGK----KALAIARIDKV 247 +P I+ + + G + KA+ + IDK Sbjct: 291 GIPRHDYEIVDGEGNVIGKVTSGTQSPSLQKAIGMGYIDKA 331 >gi|254525819|ref|ZP_05137871.1| glycine cleavage system T protein [Prochlorococcus marinus str. MIT 9202] gi|221537243|gb|EEE39696.1| glycine cleavage system T protein [Prochlorococcus marinus str. MIT 9202] Length = 370 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 52/305 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63 S+ I + G + ++Q + ++ + + +L +G I+ +I + E D Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110 Query: 64 --TFILEIDRSK-RDSLI---DKLLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109 +L ++ S+ ++ + L ++ + V++ +Q N + W + Sbjct: 111 LSELLLIVNASRYKEDFQWIKNHLNISEISITNFKKDKVLLALQGKNSFDLFEEWIESSI 170 Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144 +F I + FS + I + Sbjct: 171 SHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVTPCG 230 Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D T P++A + L + + G+ + I Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGIQ 288 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256 +K + + G +L + IGT+ +A+A A I+ I + Sbjct: 289 KKLVGLSIEGKAIGRKGCAVLKGEENIGTITSGSWSPTKQQAIAFAYINTSHALINNEVQ 348 Query: 257 LTVHG 261 +++ G Sbjct: 349 ISIRG 353 >gi|190889725|ref|YP_001976267.1| sarcosine dehydrogenase [Rhizobium etli CIAT 652] gi|190695004|gb|ACE89089.1| probable sarcosine dehydrogenase protein [Rhizobium etli CIAT 652] Length = 816 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 76/277 (27%), Gaps = 54/277 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 + G A L I DV P + +L +G I +++I E+ + + Sbjct: 496 LKGSDAEAALSWIAANDVAR-PVGSLIYTQMLNDKGGIECDLTVARIAENEYYIVTGTGF 554 Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106 I LID Y + R+ V + + Sbjct: 555 ATHDFDWIARNIPAEMHAELIDVTSAYSVLSLMGPNARAVLEKVTGSDVSNTAIPFGQVK 614 Query: 107 EHTFSNSSFIDERFSIADVLLHRT-----------------WGHNEKIASDIKTYHELRI 149 S R + L + G + + + R+ Sbjct: 615 TIGISGCPVRALRITYVGELGYELHVPIEYATAVYDALMASGGELGLVNAGYRAIESCRL 674 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 G +D P P +A + + + K + G+E + R Q ++KR Sbjct: 675 EKGYRAWGSDIGPDHT-PVEAGLGW--AVKIRKNIPFRGREAIER-QLAGGVKKRLACFV 730 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 D + I + +G L G + + Sbjct: 731 PDDPDIVLLGRETIYRNGKRVGWLSS--GGFGYTLGK 765 >gi|15963836|ref|NP_384189.1| putative sarcosine oxidase alpha subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|307309537|ref|ZP_07589192.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti BL225C] gi|307320369|ref|ZP_07599786.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti AK83] gi|7388257|sp|O87386|SOXA_RHIME RecName: Full=Sarcosine oxidase subunit alpha; Short=Sarcosine oxidase subunit gi|15073011|emb|CAC41470.1| Putative sarcosine oxidase alpha subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|306893935|gb|EFN24704.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti AK83] gi|306899997|gb|EFN30618.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti BL225C] Length = 987 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A FL + L LP AR +L G I S++EE+ F + Sbjct: 657 IEITGSDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLEENRFFMTTTT 716 Query: 72 SKRDSLIDKLLF 83 + +++ L F Sbjct: 717 AYAAGVMNHLEF 728 >gi|23009095|ref|ZP_00050272.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Magnetospirillum magnetotacticum MS-1] Length = 566 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 24/64 (37%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A +Q +T DV L +A+ G ++ + ++ + F Sbjct: 304 LSALRKFEVIGPDAEALMQRALTRDVRKLAVGQIVYAAMCYEHGGMIDDGTLFRLGPNNF 363 Query: 66 ILEI 69 Sbjct: 364 RWIC 367 >gi|317486597|ref|ZP_07945417.1| aminomethyltransferase folate-binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922149|gb|EFV43415.1| aminomethyltransferase folate-binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 414 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + + V G A+ LQ T D+ +L A A L G ++ ++ + E + + Sbjct: 52 HMAGLMVSGPDALEALQWAFTKDL-SLSGPRAAYGAFLDASGGVVDDAIVYPLSEGRYFV 110 Query: 68 EIDRSKRDSLIDKLL 82 ++ K + + + L Sbjct: 111 VLNVGKGERIAESLS 125 >gi|308500235|ref|XP_003112303.1| hypothetical protein CRE_29621 [Caenorhabditis remanei] gi|308268784|gb|EFP12737.1| hypothetical protein CRE_29621 [Caenorhabditis remanei] Length = 871 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A+ +LQ + +A+V P + + +G + +S++ + F + + Sbjct: 523 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTIQ 581 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105 ++ ++ + ++ + +Q + G + + Sbjct: 582 QERVLVWMKKWQAILKARVHVQDVTGAYTALD 613 >gi|269219427|ref|ZP_06163281.1| glycine cleavage system T protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269211123|gb|EEZ77463.1| glycine cleavage system T protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 364 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 57/303 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V G A L + T+P AR S +L P G I+ ++ ++EE + Sbjct: 51 LSHMGQVEVEGPQAAAVLDYSLCTKPSTMPAGRARYSMMLAPDGGIIDDLIVYRLEEARY 110 Query: 66 ILEIDRSKRDSLIDKLLF------------------YKLRSNVIIEIQP---INGVVLSW 104 ++ + + R +++++L + +I +Q + VV Sbjct: 111 LVVPNGANRITVVEELTRRGREWCAKNEASESHSIVDRTLERALIAVQGPESLEAVVALL 170 Query: 105 NQEHTFSNSSF-----IDERFSIADVLLHRT--------------------WGHNEKIAS 139 E ++ ++ + ++ RT W E A Sbjct: 171 GPEDAERVAALGYYRALEAKVDGVPAMIARTGYTGETGYEIMLPASAAPDVWRKIEAKAC 230 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + + LR+ G+ + + P DA L ++G ++ + Sbjct: 231 GLASRDTLRLEAGMPLYGNELGRD-VTPADAGAARLPADHE----FVGGAALAERKPTWD 285 Query: 200 IRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMAL 257 + G +G+ +++ E+G + L + +++ I +G L Sbjct: 286 ----LYALVGEGRRAARAGNTAMSEGREVGKVTSGALSPTLGYPIALARLEPGIVEGAVL 341 Query: 258 TVH 260 V Sbjct: 342 DVD 344 >gi|227821989|ref|YP_002825960.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234] gi|227340989|gb|ACP25207.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234] Length = 987 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G+ A FL + L LP AR +L G I S++EE+ F + Sbjct: 657 IEISGRDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGMIYDDGTTSRLEENRFFMTTTT 716 Query: 72 SKRDSLIDKLLF 83 + +++ L F Sbjct: 717 AYAAGVMNHLEF 728 >gi|89095375|ref|ZP_01168291.1| glycine cleavage system T protein [Oceanospirillum sp. MED92] gi|89080380|gb|EAR59636.1| glycine cleavage system T protein [Oceanospirillum sp. MED92] Length = 371 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 46/271 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G++A L+ ++ D++ LP R + +G I+ +++ D Sbjct: 53 SHMGQVILKGENAAAELEKLVPVDIIDLPAGKQRYALFTNDEGGIMDDLMVTNYG-DHLY 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------SFID 117 + ++ + ++ I + L V +E+ +V E + S F+D Sbjct: 112 VVVNAACKEQDIAHMQA-NLGEGVELEVLDDRALVALQGPEAAQALSRICPEVNELVFMD 170 Query: 118 ERF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150 R + A+ L E + LR+ Sbjct: 171 SRHIAIDGVDCFVSRSGYTGEDGYEISIPSAEAERLCRLFLEQPEVEFIGLGARDSLRLE 230 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQE-VVSRIQHRNIIRKRP 204 G+ D P T P + + G + G E ++ +I ++N RKR Sbjct: 231 SGLCLYGHDLDP-TTTPIEGSLIWAISKCRRADGERAGGFPGAEKILDQIANKNYTRKRV 289 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +I +G + + + +IG + Sbjct: 290 GLIASGKAPIREGADLVNAEGEKIGVVTSGS 320 >gi|255021021|ref|ZP_05293074.1| Aminomethyltransferase (glycine cleavage system T protein) [Acidithiobacillus caldus ATCC 51756] gi|254969435|gb|EET26944.1| Aminomethyltransferase (glycine cleavage system T protein) [Acidithiobacillus caldus ATCC 51756] Length = 381 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 109/314 (34%), Gaps = 52/314 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP--YKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + V G A FL+ + DV L A + ++ G IL ++++ Sbjct: 53 SHMRPLDVSGPQARDFLRYALANDVARLDGQDGKALYTVMVQEDGGILDDLIVTRRTARE 112 Query: 65 FILEIDRSKRDSLIDKLLFYK------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117 + L ++ ++ +S L R+ I+ +P G++ ++ +D Sbjct: 113 YRLVLNAARAESDTVHLRCLARRWAGSQRAAPEIQERPDLGILACQGPVAARQLAAVLDF 172 Query: 118 ----ERFSIAD----------------------VLLHRTWGHNEKIASD------IKTYH 145 +R + R G + + + + Sbjct: 173 PELLQRKPFSTLERDQLFLSRTGYTGEDGFEIIAPGDRLLGLADALVAAGVKPAGLAARD 232 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D + P + +D + + ++G+ ++ + + R+ Sbjct: 233 SLRLEAGLNLYGQDMTVADS-PARSNLDWTVDLRDPEREFLGRSALAAERAQG-ARQALR 290 Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 + D + +G + + + + +G + ++ +A+AR+ D + + +++ Sbjct: 291 GLILKDGIARAGCAVSSREGLPLGQVTSGLFAPSLRRGIALARL-TSDTPLGATVFVSLR 349 Query: 261 G---VRVKASFPHW 271 G V + P W Sbjct: 350 GREHVALVVQPPFW 363 >gi|15221119|ref|NP_172650.1| aminomethyltransferase, putative [Arabidopsis thaliana] gi|30682471|ref|NP_849646.1| aminomethyltransferase, putative [Arabidopsis thaliana] gi|18206365|sp|O65396|GCST_ARATH RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|3157944|gb|AAC17627.1| Very strong similarity to aminomethyltransferase precursor gb|U79769 from Mesembryanthemum crystallinum. ESTs gb|T43167, gb|T21076, gb|H36999, gb|T22773, gb|N38038, gb|T13742, gb|Z26545, gb|T20753 and gb|W43123 come from this gene [Arabidopsis thaliana] gi|21928147|gb|AAM78101.1| At1g11860/F12F1_30 [Arabidopsis thaliana] gi|30102502|gb|AAP21169.1| At1g11860/F12F1_30 [Arabidopsis thaliana] gi|332190681|gb|AEE28802.1| aminomethyltransferase [Arabidopsis thaliana] gi|332190682|gb|AEE28803.1| aminomethyltransferase [Arabidopsis thaliana] gi|332190683|gb|AEE28804.1| aminomethyltransferase [Arabidopsis thaliana] Length = 408 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 33/70 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK +PFL+ ++ ADV L + +G + +I+K+ ++ L ++ Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 150 GCRDKDLAHI 159 >gi|222106743|ref|YP_002547534.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4] gi|221737922|gb|ACM38818.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4] Length = 987 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++CG A FL + L LP AR +L G I S+++E+ + + Sbjct: 657 IEICGPDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRMDENRYFMTTTT 716 Query: 72 SKRDSLIDKLLF 83 + +++ L F Sbjct: 717 AYAAGVMNHLEF 728 >gi|55742723|ref|NP_620802.2| dimethylglycine dehydrogenase, mitochondrial precursor [Rattus norvegicus] gi|55715821|gb|AAH85697.1| Dimethylglycine dehydrogenase [Rattus norvegicus] Length = 857 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 97/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582 Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHT-----FSNSSF 115 F+L + + +R +V I I GV+ ++ Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642 Query: 116 IDE--------------------RFSIADVLLHRTWGHNEKIAS---------------D 140 D+ R S L + E A+ + Sbjct: 643 SDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDN 702 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR 197 TY + LR+ ++ T P +A +D I L K + G++ + +I+ + Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPANFTGKQALKQIKAK 759 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TD++ P G+ + IG + A A ++ + Sbjct: 760 GLKRRLVCLTLATDNVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEVG 819 Query: 251 IKKGMALTVHGVRVKAS 267 + + L Sbjct: 820 QQVEVELLGKNYPATII 836 >gi|254479868|ref|ZP_05093116.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214039430|gb|EEB80089.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 383 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 90/298 (30%), Gaps = 54/298 (18%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68 I+V G AI F Q + DV + P R G ++ ++ ++EE F L Sbjct: 70 IEVSGSDAIEFTQLLTPRDVASCPVGRCRYVVFTDHDGGVINDAIMLRLEESRFWLSPGD 129 Query: 69 ---------------IDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGVVLSWNQEH 108 +D + + L K+ + ++ G E Sbjct: 130 GDVLLWAQGVAARSGMDVKLTEPDVSPLQLQGPLAPKVARKLFGDVAVEMGYYHLHELE- 188 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------HELR-INHG 152 + + R + L + + + +++ +R I G Sbjct: 189 -LNGIPLVLSRTGWSGELGYEIYLRDGSRGTELWDLVMAAGEEFGIKPACPSAMRTIEGG 247 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTD 211 I+ +D P M+ L + L K YIG+ + +I R R + I Sbjct: 248 ILSYASDITREDT-PFTIGMERL--LDLDKSQDYIGKAALQQIAKEGTPR-RLVGIEIDG 303 Query: 212 DLPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 D + + ++G L R+++ + L G +K Sbjct: 304 DPIGGNDRFWDVFENQDKVGHLTRCAWSP-----RLERNIGLVNLPTELAEPGTALKV 356 >gi|217979705|ref|YP_002363852.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella silvestris BL2] gi|217505081|gb|ACK52490.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella silvestris BL2] Length = 378 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 89/262 (33%), Gaps = 42/262 (16%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 I V G ++ L A++T+D+ + + S I+ +G ++ L+ + + + Sbjct: 59 LRLIDVSGPDSLAALNAMLTSDIARIKPGQSSISNIVDDEGSLIDDVLVYCDGPNAYRIS 118 Query: 69 IDRSKRDSLIDKLLFYK---LRSNVIIEIQPING----VVLS------------------ 103 + ++ + R + I + G +L+ Sbjct: 119 HGGGALEDVLPAFAEGRNVQFRKDNDTHILSLQGPKALEILAPHTPMNLADLRYFEHQRT 178 Query: 104 --WNQEHTFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTY---HELRINH 151 + ++ + + + ER + A L + + + ++ +R+ Sbjct: 179 TLFGRDVSIARGGYSAERGYEVFCKAADAVFLWDQILEAGKPFGATAVSWSCLDIVRVEG 238 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT- 210 ++ D P +A +D + L+K + G++ + R R +R I Sbjct: 239 ALLFFPFDMPEGDTTPWEAGVDWS--VDLSKPAFRGKQALER--RRAEVRTAQAGIEIDH 294 Query: 211 DDLPPSGSPILTDDIEIGTLGV 232 + G+ I D EIG + Sbjct: 295 HEAVEPGAKIFKDGREIGVVNS 316 >gi|254459509|ref|ZP_05072925.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2083] gi|206676098|gb|EDZ40585.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium HTCC2083] Length = 1005 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 80/262 (30%), Gaps = 51/262 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G ++ ++++I++ TF+ Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKVGKCRYGLMCSENGFLIDDGVVARIDDVTFLCHTTTGG 738 Query: 74 RDSLIDKL-----------LFY-------------------KLRSNVIIEIQPINGVVLS 103 +++ + Y K+ + + + Sbjct: 739 AETIHGHMEEWLQTEWWDWNVYVANVTEQYAQIAVVGPNARKVLEKLGGMDVSKDALGFM 798 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------- 146 + T R S + L + + + + + H Sbjct: 799 EWADGTIGGFDARVYRISFSGELSYEIAVPSSQGLAFWEALHAAGEEFGVMPYGTETLHI 858 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR G + + T+ P D + +S K Y+G+ R + R + + Sbjct: 859 LRAEKGFIMIGDE-TDGTVIPQDLNLQW--ALSKKKEDYLGKRAHQRSHMADPERWKLVG 915 Query: 207 I-TGTDDLPPSGSPILTDDIEI 227 + T + P G+ + + ++ Sbjct: 916 LETVDKSVLPDGAYAVEEGVKA 937 >gi|260834879|ref|XP_002612437.1| hypothetical protein BRAFLDRAFT_214256 [Branchiostoma floridae] gi|229297814|gb|EEN68446.1| hypothetical protein BRAFLDRAFT_214256 [Branchiostoma floridae] Length = 822 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 80/277 (28%), Gaps = 62/277 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++ G + +LQ + +V +P + +L G ++++ E+ +++ Sbjct: 495 VRSSGDEVVTYLQRLCCNEVD-VPVGTVLHTGMLNHYGGYENDCSLARLAENLYLIISPS 553 Query: 72 SKR----DSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID--------- 117 ++ + L L V I +I P + + D Sbjct: 554 NQMVRSWEWLHRHLPKEGT---VQIRDITPYYAAINVLGPRSRELMAELTDAVTMSSQYF 610 Query: 118 -------------ER-----FSIADVLLHRTWGHNEKIAS---------------DIKTY 144 R S + L + E ++ Y Sbjct: 611 PSFTCRELSIGFAPRIRAMSLSHSGELGWMLYVPQEYALHVYDHIMHKGRDFGIRNVGYY 670 Query: 145 HE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201 LR+ D +++ P + + + KG +IG+ + + + + + Sbjct: 671 TIAHLRMERAFAFWGIDL-DASVTPFEC--QREHRVKFGKGVDFIGRSALLKQKQEGVRQ 727 Query: 202 KRPMIITGTDDL-----PPSGSPILTDDIEIGTLGVV 233 K M + DL P G PI +G Sbjct: 728 KFVMFLLDNHDLDNDLWPWGGEPIWEGGRVVGRTTSA 764 >gi|260462119|ref|ZP_05810363.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259031979|gb|EEW33246.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 803 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 100/299 (33%), Gaps = 54/299 (18%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFIL 67 V G A +L ++ + AR + +L P G++ + + ++ L Sbjct: 492 VSGPGAQAWLDRLLACKLPK--PGQARLAPMLGPDGRLKGDLTVINWDGGDYWLMGSYYL 549 Query: 68 E-----------IDRSKRDSLIDKLLFYKLR---SNVIIEI---QPINGVVLSWNQEHTF 110 D L D + + L + I+E Q ++ L + F Sbjct: 550 REFHMRWFESHAADGVTVTDLSDAMSGFLLTGPNARKILERTTHQDVSAAALPFMACGAF 609 Query: 111 SNS--SFIDERFSIADVLLHR--------------TWGHNEKIASDIKTY---HELRINH 151 R SIA L E + Y + LR+ Sbjct: 610 DIGMVRARVARLSIAGELGFEISCPVAMHATLRETLLAAGEGLGLAEIGYYALNALRLEK 669 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + +F P +D I+ KG +IG+E R + ++ + Sbjct: 670 SFGIWSREFTQGYA-PRQTGLDRF--IAFDKGDFIGREAALRERQTGTSQRIVTLEIDAL 726 Query: 212 DLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265 D SG P+ D +G + K++A+A +D D + ++G AL+VH V V+ Sbjct: 727 DADASGFEPVWRDGRRVGFVTSGGFGYTIGKSVALALVD--DDSAEEGTALSVHIVGVE 783 >gi|55376909|ref|YP_134760.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049] gi|55229634|gb|AAV45054.1| probable aminomethyltransferase [Haloarcula marismortui ATCC 43049] Length = 458 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 46/220 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A ++T DV + + + G +L ++ + +ED F I Sbjct: 100 IRVKGPDAEALTNYVVTRDVTGMDAMDGKYVILCNEDGGVLNDPVLLRPKEDEFWFSISD 159 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING--------------VVLSWNQEHTFSNSSFID 117 S +L+ L + ++ +EI I+ V + ++ ++ Sbjct: 160 S---TLMQWLQGVNVDNDFDVEIDEIDVAPMQIQGPRALDVMVDVVGDKVKDVPYYGLME 216 Query: 118 ERFSIADVLLHRTWGHNEK---------IASDIKTY------------------HELRIN 150 DVL+ +T EK + + + + H RI Sbjct: 217 AEIDGCDVLISQTGFSGEKGFEVYVKDAMENAERVWDPVMESVKDHGGRQIAPGHHRRIA 276 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190 GI+ D T P + + + YIG+EV Sbjct: 277 AGIMSWGQDLDHETS-PFQVNLGY-HVPDDKEADYIGKEV 314 >gi|38481924|gb|AAR21108.1| mitochondrial glycine decarboxylase T-protein [Thalassiosira weissflogii] Length = 414 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ I+ GK F++ ++ D+ +LP S I QG I+ +I+ Sbjct: 81 SLFDVSHMGQIRWHGKDRTAFIEKLVVGDIASLPAGSGCLSLITNAQGGIIDDTVITNAG 140 Query: 62 EDTFILEIDRSKRDSLIDKLL 82 D + ++ + + + Sbjct: 141 -DYIYMVVNGATKFGDMKHFK 160 >gi|198433859|ref|XP_002125419.1| PREDICTED: similar to aminomethyltransferase [Ciona intestinalis] Length = 405 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 91/282 (32%), Gaps = 53/282 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK F++++ DV LP + +G I+ +I++ ++D + Sbjct: 91 KVYGKDKESFIESMTVCDVKGLPENGGSLTVFTNAEGGIMDDAIINQTQQDYLYCVSNAG 150 Query: 73 KRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHTFSNSSF------------ 115 D + L + V++E+ + + + + Sbjct: 151 CSDKISTCLRENLIDFTAKGGEVVLELLDCGLLAVQGPKMAEVLQTGTDTDLSKLYFMQN 210 Query: 116 -------IDERFSIADVLL----------HRTWGHNEKIA-------SDIKTYHELRINH 151 +D R + +R E I + + LR+ Sbjct: 211 VEANLFGVDCRITRCGYTGEDGVEISVAKNRAVELAENICSHEDVELAGLGARDSLRLEA 270 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQE-VVSRIQHRNIIRKRPMIITG 209 G+ D P +A + G K + G E +V++I+ + R+ +I++ Sbjct: 271 GLCLYGNDI-DEMTTPVEAGLTWCIGKRRRKEKNFPGAEKIVAQIKSKPSKRRSGLIVS- 328 Query: 210 TDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARI 244 + +G+ + EIG++ A+A + Sbjct: 329 -SAIARNGAIVQDGNGNEIGSVTSGCPSPTLSANIAMAYLPL 369 >gi|330957054|gb|EGH57314.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1006 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 97/322 (30%), Gaps = 71/322 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLD 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKPYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPIDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967 Query: 240 AIARI-DKVDHAIKKGMALTVH 260 + RI ++V + G + Sbjct: 968 GLKRIGERVFAPLADGSVIEAE 989 >gi|297844036|ref|XP_002889899.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp. lyrata] gi|297335741|gb|EFH66158.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp. lyrata] Length = 408 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 33/70 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK +PFL+ ++ ADV L + +G + +I+K+ ++ L ++ Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 150 GCRDKDLAHI 159 >gi|242074370|ref|XP_002447121.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor] gi|241938304|gb|EES11449.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor] Length = 407 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 34/70 (48%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G+ AIPFL++++ ADV L + +G + +++K+ + L ++ Sbjct: 89 LSLRGRDAIPFLESLVIADVAALRDGTGTLTVFTNDKGGAIDDSVVTKVTDHHIYLVVNA 148 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 149 GCRDKDLAHI 158 >gi|39995483|ref|NP_951434.1| glycine cleavage system T protein [Geobacter sulfurreducens PCA] gi|39982246|gb|AAR33707.1| glycine cleavage system T protein [Geobacter sulfurreducens PCA] gi|298504483|gb|ADI83206.1| glycine cleavage system T protein [Geobacter sulfurreducens KN400] Length = 362 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 87/240 (36%), Gaps = 40/240 (16%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR----DSLIDKL----- 81 V ++P +R +L G I+ ++ ++ ++ ++ ++ + ++ +L Sbjct: 76 VASIPVGRSRYGFLLNGDGGIMDDLIVFRLAQNEAMVVVNAATIGKDFAAISARLGGGGF 135 Query: 82 -LFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGH 133 + + ++ + V + + FI + AD ++ RT G+ Sbjct: 136 QDISAATAKLDLQGPLSREVLVEVIGPEIAAIPYFKFIRTKVLGADAIVSRTGYTGELGY 195 Query: 134 NEKIASD--IKTYHE-----------------LRINHGIVDPNTDFLPSTIFPHDALMDL 174 + SD ++ + LR+ G +D + P +A ++ Sbjct: 196 EIFLPSDRVVELWQRLLADPRVRPAGLGARDVLRLEVGYSLYGSDI-DESTTPLEAGLES 254 Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 +S K ++G++ + + ++R+R + P IL ++G + V Sbjct: 255 F--VSFDKS-FVGKDALLAQRAEGVMRRRVAFQVASRRSPRHDYEILFQGEQVGAVTSGV 311 >gi|28867688|ref|NP_790307.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. tomato str. DC3000] gi|28850923|gb|AAO54002.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|331015002|gb|EGH95058.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1006 Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + ++ L Y KL S V I++ Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144 ++W +E + R S L + G EKIA K Y Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P D M G + +IG ++R Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 908 EQRKQLVGLKPIDSTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958 >gi|254452771|ref|ZP_05066208.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Octadecabacter antarcticus 238] gi|198267177|gb|EDY91447.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Octadecabacter antarcticus 238] Length = 756 Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 98/308 (31%), Gaps = 62/308 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q T ++ TL +A+ G ++ + ++ +D F Sbjct: 425 LSPLRKFEITGPDAEALCQYAFTRNMKTLAIGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 484 Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEH- 108 + + L +KL L V ++ V + W H Sbjct: 485 RWIGGSDYGGEWLRELAEKLGLKVL---VRASTDQMHNVAVQGPESRDLLRKIVWTAPHN 541 Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139 T S ++F+ R L + H + A Sbjct: 542 PEFDQLGWFRFTPARLNTESGTAFVLSRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQDH 601 Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 ++ +RI G++ DF T P +A + + ++G++ + R Sbjct: 602 GIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKTDDFVGRDALIR- 659 Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDH 249 + K+ + + ++ G I +IG + + L A+ARID Sbjct: 660 -RKEHPMKKLVGLEIDSNVDVGHGDCIHIGRAQIGEVTSAMRSPLLKKHVALARIDVAHS 718 Query: 250 AIKKGMAL 257 A+ + + Sbjct: 719 AVGTEVEI 726 >gi|328769709|gb|EGF79752.1| hypothetical protein BATDEDRAFT_16867 [Batrachochytrium dendrobatidis JAM81] Length = 415 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 53/272 (19%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 GK + F+++++ D+ L + S +G I+ +I++ ++ + + Sbjct: 94 SGKDHVKFMESLVVGDIAGLQMGSSTLSVFTNEKGGIIDDTVINRQDDKGLYVVSNAGCA 153 Query: 75 DSLIDKLLFY-------------KLRSNV-IIEIQPINGVVLSWNQE-HTFSNSSFIDER 119 D + + K+ NV +I +Q + + + S F+ R Sbjct: 154 DKDLAHIRKQLADFQNKGGDVDVKVLDNVSLIALQGPDAATVVQSLTKEDLSKFGFMTSR 213 Query: 120 ---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152 A L + H + + LR+ G Sbjct: 214 HMDIAGVDVYASRCGYTGEDGFEISVAHKDAVALTQKLLDHPHVELAGLGARDSLRLEAG 273 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQE-------VVSRIQHRNIIRKRP 204 + D I P + + G +G ++G + V ++ + + R Sbjct: 274 LCLYGHDL-NEDITPAEGGLTWTIGKRRRAEGGFLGADKILSQLKVTAKGNVQLDVANRR 332 Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVVV 234 + + G+ I + +IGT+ Sbjct: 333 VGFIVSGAPAREGAEIYDKVNGTKIGTITSGC 364 >gi|313837471|gb|EFS75185.1| glycine cleavage system T protein [Propionibacterium acnes HL037PA2] gi|314929319|gb|EFS93150.1| glycine cleavage system T protein [Propionibacterium acnes HL044PA1] gi|314971678|gb|EFT15776.1| glycine cleavage system T protein [Propionibacterium acnes HL037PA3] gi|328906983|gb|EGG26749.1| aminomethyltransferase [Propionibacterium sp. P08] Length = 371 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 102/317 (32%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G A L + + + A+ S +LT G ++ + + + + Sbjct: 51 LSHMGEIRISGPDAGAALDYALAGKLSAVAEGRAKYSLLLTDDGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------EHTFS 111 ++ + + ++ + + + +V + + +++ + T + Sbjct: 111 LVVANAANAETDLAEFTKRCAQFDVTVTDESAQTALVAVQGPKAVEIVLAALQKADTTLN 170 Query: 112 NSSFIDERF-------------------------------SIADVLLHRTW---GHNEKI 137 D R+ + A L + G + I Sbjct: 171 PDEVRDVRYYRCLTGELDGFPVLVARTGYTREDGYELYVPAEAAEHLWQLLLDAGGGDLI 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + + I+P A + + I+ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTN-IYPSQAGLGRV--INFKKEGDFVGR--SALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ + +G + + +A+A +D + Sbjct: 286 DATADRVLVGLAGEGRRAGRAGYAVVNEGKAVGAITSGILSPTLGHPIAMAFVDPDVAEV 345 Query: 252 KKGMALTVHGVRVKASF 268 + + V G + Sbjct: 346 GTSLNVDVRGKAFTVTV 362 >gi|225698148|pdb|3GIR|A Chain A, Crystal Structure Of Glycine Cleavage System Aminomethyltransferase T From Bartonella Henselae Length = 393 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 39/201 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL + D L +R S +L + IL +++++ E F+ Sbjct: 82 SHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFM 141 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSW----------- 104 L + + +L R+ V++ +Q + Sbjct: 142 LVANAGNAQADFAELEK---RAFGFECQVIALERVLLALQGPQAAAVLADAGLPGNELLF 198 Query: 105 ------NQEHTFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 Q+ + S + E A L + G + + LR+ Sbjct: 199 MQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEKLLGDSRVEWVGLAARDSLRLEA 258 Query: 152 GIVDPNTDFLPSTIFPHDALM 172 G+ D P T P DA + Sbjct: 259 GLCLHGNDITPDTT-PIDAAL 278 >gi|289426216|ref|ZP_06427962.1| aminomethyltransferase [Propionibacterium acnes SK187] gi|289426829|ref|ZP_06428555.1| aminomethyltransferase [Propionibacterium acnes J165] gi|289153381|gb|EFD02096.1| aminomethyltransferase [Propionibacterium acnes SK187] gi|289159918|gb|EFD08096.1| aminomethyltransferase [Propionibacterium acnes J165] gi|313764749|gb|EFS36113.1| glycine cleavage system T protein [Propionibacterium acnes HL013PA1] gi|313791799|gb|EFS39910.1| glycine cleavage system T protein [Propionibacterium acnes HL110PA1] gi|313802114|gb|EFS43346.1| glycine cleavage system T protein [Propionibacterium acnes HL110PA2] gi|313815814|gb|EFS53528.1| glycine cleavage system T protein [Propionibacterium acnes HL059PA1] gi|313818277|gb|EFS55991.1| glycine cleavage system T protein [Propionibacterium acnes HL046PA2] gi|313820039|gb|EFS57753.1| glycine cleavage system T protein [Propionibacterium acnes HL036PA1] gi|313823152|gb|EFS60866.1| glycine cleavage system T protein [Propionibacterium acnes HL036PA2] gi|313825571|gb|EFS63285.1| glycine cleavage system T protein [Propionibacterium acnes HL063PA1] gi|313827809|gb|EFS65523.1| glycine cleavage system T protein [Propionibacterium acnes HL063PA2] gi|313838446|gb|EFS76160.1| glycine cleavage system T protein [Propionibacterium acnes HL086PA1] gi|314915241|gb|EFS79072.1| glycine cleavage system T protein [Propionibacterium acnes HL005PA4] gi|314919794|gb|EFS83625.1| glycine cleavage system T protein [Propionibacterium acnes HL050PA3] gi|314925461|gb|EFS89292.1| glycine cleavage system T protein [Propionibacterium acnes HL036PA3] gi|314931808|gb|EFS95639.1| glycine cleavage system T protein [Propionibacterium acnes HL067PA1] gi|314955965|gb|EFT00363.1| glycine cleavage system T protein [Propionibacterium acnes HL027PA1] gi|314958360|gb|EFT02463.1| glycine cleavage system T protein [Propionibacterium acnes HL002PA1] gi|314960288|gb|EFT04390.1| glycine cleavage system T protein [Propionibacterium acnes HL002PA2] gi|314963097|gb|EFT07197.1| glycine cleavage system T protein [Propionibacterium acnes HL082PA1] gi|314968067|gb|EFT12166.1| glycine cleavage system T protein [Propionibacterium acnes HL037PA1] gi|314978275|gb|EFT22369.1| glycine cleavage system T protein [Propionibacterium acnes HL072PA2] gi|314987739|gb|EFT31830.1| glycine cleavage system T protein [Propionibacterium acnes HL005PA2] gi|314990217|gb|EFT34308.1| glycine cleavage system T protein [Propionibacterium acnes HL005PA3] gi|315077561|gb|EFT49619.1| glycine cleavage system T protein [Propionibacterium acnes HL053PA2] gi|315080345|gb|EFT52321.1| glycine cleavage system T protein [Propionibacterium acnes HL078PA1] gi|315084604|gb|EFT56580.1| glycine cleavage system T protein [Propionibacterium acnes HL027PA2] gi|315085940|gb|EFT57916.1| glycine cleavage system T protein [Propionibacterium acnes HL002PA3] gi|315088642|gb|EFT60618.1| glycine cleavage system T protein [Propionibacterium acnes HL072PA1] gi|315098251|gb|EFT70227.1| glycine cleavage system T protein [Propionibacterium acnes HL059PA2] gi|315108251|gb|EFT80227.1| glycine cleavage system T protein [Propionibacterium acnes HL030PA2] gi|327332223|gb|EGE73960.1| glycine cleavage system T protein [Propionibacterium acnes HL096PA3] gi|327442845|gb|EGE89499.1| glycine cleavage system T protein [Propionibacterium acnes HL013PA2] gi|327451067|gb|EGE97721.1| glycine cleavage system T protein [Propionibacterium acnes HL087PA3] gi|327452851|gb|EGE99505.1| glycine cleavage system T protein [Propionibacterium acnes HL092PA1] gi|327453578|gb|EGF00233.1| glycine cleavage system T protein [Propionibacterium acnes HL083PA2] gi|328753101|gb|EGF66717.1| glycine cleavage system T protein [Propionibacterium acnes HL087PA1] gi|328753755|gb|EGF67371.1| glycine cleavage system T protein [Propionibacterium acnes HL020PA1] gi|328759155|gb|EGF72771.1| glycine cleavage system T protein [Propionibacterium acnes HL025PA2] gi|332675161|gb|AEE71977.1| aminomethyltransferase [Propionibacterium acnes 266] Length = 371 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ + +G + + +A+A +D Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|313807231|gb|EFS45718.1| glycine cleavage system T protein [Propionibacterium acnes HL087PA2] Length = 371 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ + +G + + +A+A +D Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|319779098|ref|YP_004130011.1| Aminomethyltransferase (glycine cleavage system T protein) [Taylorella equigenitalis MCE9] gi|317109122|gb|ADU91868.1| Aminomethyltransferase (glycine cleavage system T protein) [Taylorella equigenitalis MCE9] Length = 359 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Query: 12 IKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 I + G + FL+ +++ D+L + A S +L +G I+ + +++ + L + Sbjct: 56 IDLSGTRIVDFLRKLLSNDILKISESPGKALYSCMLNEEGGIIDDLITYYVDDGDWRLVV 115 Query: 70 DRSKRDSLIDKLLF 83 + DS ++ + Sbjct: 116 NAGCADSDLEWISK 129 >gi|238490422|ref|XP_002376448.1| N,N-dimethylglycine oxidase, putative [Aspergillus flavus NRRL3357] gi|220696861|gb|EED53202.1| N,N-dimethylglycine oxidase, putative [Aspergillus flavus NRRL3357] Length = 846 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +V G ++ LQ + T D+ + +L G I +S++ ED F + Sbjct: 511 EVSGPGSVDLLQRLTTGDITA-KPGTITYTLLLNDHGGIRSDIFVSRLSEDAFQI 564 >gi|169772507|ref|XP_001820722.1| NAD dehydrogenase [Aspergillus oryzae RIB40] gi|83768583|dbj|BAE58720.1| unnamed protein product [Aspergillus oryzae] Length = 846 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +V G ++ LQ + T D+ + +L G I +S++ ED F + Sbjct: 511 EVSGPGSVDLLQRLTTGDITA-KPGTITYTLLLNDHGGIRSDIFVSRLSEDAFQI 564 >gi|87119851|ref|ZP_01075747.1| sarcosine oxidase, alpha subunit family protein [Marinomonas sp. MED121] gi|86164553|gb|EAQ65822.1| sarcosine oxidase, alpha subunit family protein [Marinomonas sp. MED121] Length = 973 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 45/109 (41%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S ++V G A F+ I T L P R + + QG ++ + +IE+D Sbjct: 639 IDVSTLGGLEVRGPDAAEFVNRIYTFAFLKQPVGKTRYAVLTNEQGVVIDDGVACRIEDD 698 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 + + S D++ ++ + + + ++I + + N S Sbjct: 699 HYYITATTSGVDAVYREMTKWNAQWRLDVDIANVTSAFSAVNVAGPLSR 747 >gi|163788409|ref|ZP_02182855.1| aminomethyltransferase [Flavobacteriales bacterium ALC-1] gi|159876729|gb|EDP70787.1| aminomethyltransferase [Flavobacteriales bacterium ALC-1] Length = 360 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G +A+ +Q + + D L A+ S + G ++ +I KI+++T++ Sbjct: 49 SHMGEFLIEGPNALALIQKVSSNDASKLEIGKAQYSCLPNDDGGVVDDLIIYKIKDETYL 108 Query: 67 LEIDRSKRD 75 L ++ S + Sbjct: 109 LVVNASNIE 117 >gi|71065359|ref|YP_264086.1| glycine cleavage system aminomethyltransferase T [Psychrobacter arcticus 273-4] gi|71038344|gb|AAZ18652.1| aminomethyltransferase [Psychrobacter arcticus 273-4] Length = 390 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS--KIEED 63 S+ + + G A +LQ ++ DV L A S +L +G I+ ++ EE Sbjct: 60 SHMVIVDIKGLDAKAWLQKLLANDVDKLKTIGKALYSPMLNEEGGIIDDLIVYLSNSEET 119 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106 + + + RD + + +V + + ++ Sbjct: 120 EYRIVSNAGTRDKDMAQFEKVAKDFDVTLTERTDLAMLAVQGP 162 >gi|27380862|ref|NP_772391.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium japonicum USDA 110] gi|27354028|dbj|BAC51016.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 52/275 (18%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ +++ G + A L+ ++ D++ + R + G IL +++ Sbjct: 59 SHMGQLRLLPKSGRVEDAARALERLVPQDIVAIALGRQRYAQFTNADGGILDDLMVANFG 118 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDER 119 D L ++ + + L + L + +I+ ++ E + Sbjct: 119 -DHLFLVVNAACKAEDEAHLRAH-LSDDCVIDSLADRALIALQGPKAEAVLAKFCAKAPS 176 Query: 120 FSIADVLLHRTWG----------------HNEKIASDIKTY------------------H 145 D H G A+D + Sbjct: 177 MKFMDAGPHEVAGIKCFVSRSGYTGEDGFEISVPAADAERLAKTLLENPDVVPIGLGARD 236 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D +T P +A ++ G + G E + + Sbjct: 237 SLRLEAGLCLYGHDIDTATT-PVEAALEWSVQKSRRSGGARAGGFPGAEKILAHFDQGAA 295 Query: 201 RKRPMIITGTDDLPPSGSPILTDD---IEIGTLGV 232 R+R + G+ + D IG + Sbjct: 296 RRRVGLRAQGRAPVREGALLFADSASAEPIGQVTS 330 >gi|295130319|ref|YP_003580982.1| aminomethyltransferase [Propionibacterium acnes SK137] gi|291376985|gb|ADE00840.1| aminomethyltransferase [Propionibacterium acnes SK137] gi|313772501|gb|EFS38467.1| glycine cleavage system T protein [Propionibacterium acnes HL074PA1] gi|313809736|gb|EFS47457.1| glycine cleavage system T protein [Propionibacterium acnes HL083PA1] gi|313830646|gb|EFS68360.1| glycine cleavage system T protein [Propionibacterium acnes HL007PA1] gi|313833866|gb|EFS71580.1| glycine cleavage system T protein [Propionibacterium acnes HL056PA1] gi|314973648|gb|EFT17744.1| glycine cleavage system T protein [Propionibacterium acnes HL053PA1] gi|314976241|gb|EFT20336.1| glycine cleavage system T protein [Propionibacterium acnes HL045PA1] gi|314983550|gb|EFT27642.1| glycine cleavage system T protein [Propionibacterium acnes HL005PA1] gi|315096267|gb|EFT68243.1| glycine cleavage system T protein [Propionibacterium acnes HL038PA1] gi|327325904|gb|EGE67694.1| glycine cleavage system T protein [Propionibacterium acnes HL096PA2] gi|327446217|gb|EGE92871.1| glycine cleavage system T protein [Propionibacterium acnes HL043PA2] gi|327447801|gb|EGE94455.1| glycine cleavage system T protein [Propionibacterium acnes HL043PA1] gi|328760599|gb|EGF74167.1| glycine cleavage system T protein [Propionibacterium acnes HL099PA1] Length = 371 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLTCRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ + +G + + +A+A +D Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|18848284|gb|AAH24126.1| Dmgdh protein [Mus musculus] Length = 633 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S+ Sbjct: 289 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 346 Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110 F+L + + R +V I+ I GV+ Sbjct: 347 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 406 Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140 S+ +F R S L + E A+ D Sbjct: 407 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 466 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ ++ T P +A ++ + L K +IG++ + +I+ Sbjct: 467 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKAE 523 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TDD+ P G+ I +G + A A + + Sbjct: 524 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 583 Query: 251 IKKGMALTVHGVRVKAS 267 + + L Sbjct: 584 QQVEVELLGKNYPATII 600 >gi|88802806|ref|ZP_01118333.1| aminomethyltransferase [Polaribacter irgensii 23-P] gi|88781664|gb|EAR12842.1| aminomethyltransferase [Polaribacter irgensii 23-P] Length = 361 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ LQ +++ D L A+ S I+ L +++E+ ++ Sbjct: 49 SHMGEFLVSGAQALALLQKVMSNDASKLEIGDAQYSCFPNEDDGIVDDLLCYRLQENEYL 108 Query: 67 LEIDRSKRD 75 L ++ S + Sbjct: 109 LVVNASNIE 117 >gi|300711406|ref|YP_003737220.1| sacrosine dehydrogenase/glycine cleavage T-protein [Halalkalicoccus jeotgali B3] gi|299125089|gb|ADJ15428.1| sacrosine dehydrogenase/glycine cleavage T-protein [Halalkalicoccus jeotgali B3] Length = 831 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 99/314 (31%), Gaps = 58/314 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS + I++ G+ A+ +Q + D+ + R S +L G +L ++++ E+ F Sbjct: 510 LSRYTGIEITGEGALDCVQHLFANDLDS-SVGQVRYSPMLDHDGGVLADMAVTRLGENRF 568 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQ---------EHTFSNSS 114 + + + + +V I+ + G+ + E SN + Sbjct: 569 VATTGGGASATEHTRWIREHAPDDVRIDAHVSDQCGLGVWGPNAREVLQPLTEEDLSNDA 628 Query: 115 F---------------IDERFSIADVLLHRTWGHNEKIASDIKT--YHE----------- 146 F + R S L + E + + + Sbjct: 629 FGYFRAKEFYIDSIPVLALRVSYVGELGWELYAPTE-YGGRLWDLIWEQGREHDMVALGN 687 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G TD P P +A + + +IG++ + + ++ Sbjct: 688 GAFLGSLRLEKGYRLWGTDLTPEHD-PDEAGIGF--AVDTDTD-FIGRDALVEARETDLD 743 Query: 201 RKR-PMIITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHAIKK 253 R+ PM ++ G+PIL + +G + + A + + + Sbjct: 744 REIVPMTFDRDGEIVDGGTPILDGEEVLGHVKAADYGYSIDAGIAYGYLPPEYAEAGVAL 803 Query: 254 GMALTVHGVRVKAS 267 V + Sbjct: 804 ETEFEGKRYPVTVA 817 >gi|89056111|ref|YP_511562.1| glycine cleavage system T protein [Jannaschia sp. CCS1] gi|88865660|gb|ABD56537.1| glycine cleavage system T protein [Jannaschia sp. CCS1] Length = 366 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 75/253 (29%), Gaps = 48/253 (18%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82 L+A++ DVL L R G +L +I++ D L ++ + + I L Sbjct: 68 LEALVPVDVLGLAEGRQRYGFFTNDTGGVLDDLMIAR-GPDGLFLVVNAGCKAADIAHLR 126 Query: 83 FY-----KLRSNVIIEIQPI-------------------NGVVLSWNQEHTFS------- 111 + + ++ +Q + ++W+ + Sbjct: 127 AHMNGVEVIEDRALLALQGPKADAALAKLIPGAADMRFMDSTRMAWDGAELWISRSGYTS 186 Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 S D+R A+ + + LR+ G+ D P +I P Sbjct: 187 EDGFEISIPDKR---AEAFARALLADDRVQPIGLGARDSLRLEAGLPLYGQDMTP-SISP 242 Query: 168 HDALMDLLNGI-----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 +A G G + G EV+ R+R ++ +G I Sbjct: 243 VEAGQAWAIGKVRRTGGDRAGGFPGAEVLLDQLANGAPRRRAGLLPEGRAPMRAGVEIFA 302 Query: 223 D---DIEIGTLGV 232 IG + Sbjct: 303 SPDTQTPIGVVTS 315 >gi|49475981|ref|YP_034022.1| glycine cleavage system aminomethyltransferase T [Bartonella henselae str. Houston-1] gi|49238789|emb|CAF28058.1| Glycine cleavage system protein t [Bartonella henselae str. Houston-1] Length = 372 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 39/201 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G A+ FL + D L +R S +L + IL +++++ E F+ Sbjct: 61 SHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFM 120 Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSW----------- 104 L + + +L R+ V++ +Q + Sbjct: 121 LVANAGNAQADFAELEK---RAFGFECQVIALERVLLALQGPQAAAVLADAGLPGNELLF 177 Query: 105 ------NQEHTFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151 Q+ + S + E A L + G + + LR+ Sbjct: 178 MQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEKLLGDSRVEWVGLAARDSLRLEA 237 Query: 152 GIVDPNTDFLPSTIFPHDALM 172 G+ D P T P DA + Sbjct: 238 GLCLHGNDITPDTT-PIDAAL 257 >gi|241667113|ref|YP_002985197.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862570|gb|ACS60235.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 985 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 63/302 (20%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL I L AR +L G I S+ + Sbjct: 646 LCDVSTLGKIEISGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 705 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 + F + + ++ L F +++ P + +L + Sbjct: 706 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILQEIVD 765 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160 S+++F + + G +I+ + +EL + G + D Sbjct: 766 EDLSDAAFPFMSARKVSLFGGQLEGRLFRISFSGELAYELAVPAGYGEGVADAIMAAGEK 825 Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + T+ P D + +S TK +IG+ +++R Sbjct: 826 HGICAYGAEALGVMRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKALLAREG 883 Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241 ++ R+R + + + +GS IL D + G + LA+ Sbjct: 884 LQDPDRQRLVGVKPLNPATGFRTGSHILADGVAATLENDQGYVTSSAFSPGLGHTIGLAL 943 Query: 242 AR 243 R Sbjct: 944 VR 945 >gi|254282757|ref|ZP_04957725.1| aminomethyltransferase [gamma proteobacterium NOR51-B] gi|219678960|gb|EED35309.1| aminomethyltransferase [gamma proteobacterium NOR51-B] Length = 381 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 94/319 (29%), Gaps = 80/319 (25%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67 +V G A FL I T + + + QG ++ + + E F + Sbjct: 61 QVTGTDAQVFLDKISTRSMA-IKPGRVTYTCWTNAQGMLVDDGTVFRFSETEFRMLPNSR 119 Query: 68 --EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------------- 110 + + + L +V + N L+ + Sbjct: 120 DDDYYAQQAEGL-----------DVEVTDVSHNSAALTVQGKTAATVLTRMGIKNLVDMK 168 Query: 111 ---------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------------- 146 + R L + W +++ + + Sbjct: 169 PFDFATFDSPAGELMISRTGFFGDLGYELWFSLDQVEA---VWDAVLAAGALPVGIVTLC 225 Query: 147 -LRINHG--IVDPNTDFLPSTI----------FPHDALMDLLNGISLTKGCYIGQEVVSR 193 R+ G I D + P+ P D + + I+L KG ++G++ + Sbjct: 226 NARLEAGHIIPDNEFELEPAKYDGSEPDSFNRTPFDLGLGFV--INLDKGDFVGRDALIA 283 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDH 249 + R + + D + + +E+G + V K++A+A + Sbjct: 284 EKERGSTWQLVALELDCDHGAAQRDVVAVNGVEVGFVTSGLFSVNLGKSIALATVKSGST 343 Query: 250 AIKKGMALTVHGVRVKASF 268 + ++ V+GV+V A Sbjct: 344 SPGGSASVVVNGVKVDAVV 362 >gi|258544884|ref|ZP_05705118.1| sarcosine oxidase, alpha subunit [Cardiobacterium hominis ATCC 15826] gi|258519804|gb|EEV88663.1| sarcosine oxidase, alpha subunit [Cardiobacterium hominis ATCC 15826] Length = 999 Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 97/308 (31%), Gaps = 68/308 (22%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ S I++ GK A FL + + L R +L G ++ + + I + Sbjct: 657 AIDASTLGKIQIDGKDAREFLNRVYSNAWSKLEPGKCRYGLMLDENGMVMDDGVTACIHD 716 Query: 63 DTFILEIDRSKRDSLIDKLLFY--------------KLRSNVIIEIQPINGVVLSWN--- 105 + F + ++D L + I + + + Sbjct: 717 NQFYMTTTTGGAARVLDWLERWHQIEWPELDVWLTSVTDHWATIAVVGPESRAILQSLCD 776 Query: 106 --------------QEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIA 138 + T + + R S + L + + Sbjct: 777 DIDFDRDAFKFMEWRAGTVAGIAARVFRISFSGELAYEINVAAGYGRHIWEAVMAAGAVP 836 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHR 197 +T H LR G + D +T P D M ++L K ++GQ ++R Sbjct: 837 YGTETMHVLRAEKGFIIVGQD-TDATQTPFDLGMPW--AVNLKKPYSFLGQRSLARSDTA 893 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILT-----------DDIEIGTLG-------VVVGKK 237 RK+ + + D + P G+ I+ DD + +LG V + Sbjct: 894 RAGRKQLVGLLAADPHTVLPEGAQIIATADPAVPRAGSDDPPVASLGYITSSYHSVALGR 953 Query: 238 ALAIARID 245 ++A+A I+ Sbjct: 954 SIALANIE 961 >gi|218462210|ref|ZP_03502301.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli Kim 5] Length = 321 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 93/300 (31%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ S +++ Sbjct: 14 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHV-DDHLFVVVNASCKET 72 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 73 DLAHLQAHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 132 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A + R H + A + LR+ G+ D Sbjct: 133 VSRSGYSGEDGFEISIPTDKAVDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 192 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G G + G + R+R + + P G Sbjct: 193 TTS-PVEAALEWAMQKARRGNGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 250 Query: 218 -SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D +EIG + V G A+ + + + + S Sbjct: 251 HARLYADAEGKVEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTLIYAEVRGKYLPITVS 310 >gi|219127634|ref|XP_002184037.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404760|gb|EEC44706.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 661 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 45/168 (26%) Query: 143 TYHELRINHGIVDPNTDFLPST-------IFPHDALMDLLNGISLTKGCYIGQEVVSR-I 194 + LRI G V + L + P + +D I++ KGCY+GQE ++ + Sbjct: 300 EFESLRIESGSVGFEREMLANQKDSFLAPPTPLELHLDYT--INMEKGCYLGQEGIASVV 357 Query: 195 QHRNIIRKRPMIITGTDD--------------------LPPSGSPIL----TDDIEIGTL 230 ++ + + DD +P +G + +IE+G L Sbjct: 358 KNPRGPPRMLYQVVFDDDFNVYDYQSAGDRSIVENLTRVPRAGDKVFVLGSNAEIEVGVL 417 Query: 231 GVVVG--------KKALAIARIDKVDHAIKKGMALTVH-GVRVKASFP 269 V LA+ R + D IKK A + R++ P Sbjct: 418 TSVAEPGSTGEPVTVGLALVR--RADSIIKKMKAKNLEINRRIEVDTP 463 >gi|75675478|ref|YP_317899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter winogradskyi Nb-255] gi|74420348|gb|ABA04547.1| glycine cleavage system T protein [Nitrobacter winogradskyi Nb-255] Length = 383 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 84/277 (30%), Gaps = 51/277 (18%) Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I + G A L+ ++ D++ + R + P G +L +++ Sbjct: 60 SHMGQIALRPKSGDVRDAALALERLVPQDIVAVAPGRQRYAQFTNPAGGLLDDLMVANFG 119 Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 D L ++ + + + L + L +I +Q + + Sbjct: 120 -DHLFLVVNGACKAADEAHLREHLSDACAIEVLTDRALIALQGPKAASVLAKKCPEVPAM 178 Query: 114 SFID--ER-------------------------FSIADVLLHRTWGHNEKIASDIKTYHE 146 F++ R + A+ ++ + + Sbjct: 179 KFMEAGPRQVGGVACFVSRSGYTGEDGYEISIPAARAEDVVSALLDDPDVAPVGLGARDS 238 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNI 199 LR+ G+ D +T P +A ++ G+ G + G V+ + Sbjct: 239 LRLEAGLCLYGHDIG-ATTTPVEAALEWSVQKSRRSGGV--RAGGFPGANVILPQFEQGA 295 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236 R+R + G+P+ D ++G V Sbjct: 296 ARRRVGLRPEGRAPVREGAPLFADAASADSIGAVTSG 332 >gi|222081882|ref|YP_002541247.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter K84] gi|221726561|gb|ACM29650.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter K84] Length = 977 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 95/301 (31%), Gaps = 63/301 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I++ GK A FL I L AR +L G I S++ E+ Sbjct: 639 CDVSTLGKIEIHGKDAATFLDRIYCNGFAKLAVGKARYGIMLREDGMIYDDGTTSRLSEE 698 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQEH 108 F + + ++ L F +E+ P + +LS + Sbjct: 699 HFFMTTTTALAAGVLTHLEFCAQTLWPELEVYFASSTDQWAQMAVAGPKSRAILSEIVDE 758 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-------- 160 S+++F + + G +I+ + +EL + G + D Sbjct: 759 DLSDAAFPFMSARPVTLFGGKLEGRLFRISFSGELAYELAVPAGYGEWVADAIMQAGEKH 818 Query: 161 ------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + T+ P D + +S TK +IG+ +++R Sbjct: 819 GICPYGAEALGVMRIEKGHVTHAEINGTVTPGDLGFGRM--VSATKTDFIGKAMLAREGL 876 Query: 197 RNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAIA 242 ++ R R + + D +G+ IL D G + LA+ Sbjct: 877 QSSDRPRLVGVKPLDPATSFRTGAHILADGAAATLENDQGYVTSSAFSPTLGHTIGLALV 936 Query: 243 R 243 + Sbjct: 937 K 937 >gi|219120440|ref|XP_002180958.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407674|gb|EEC47610.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 854 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 94/289 (32%), Gaps = 61/289 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G A FL + TA+V + + + L QG + I+K+ E+ F++ Sbjct: 529 HVQGNDAGKFLNRLSTANVDG-DWGMITYTQWLDEQGYMAADLTITKMAENHFMVV---- 583 Query: 73 KRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSN-----------SSFIDE 118 D++++K+ + L V E + + G N + S ++F Sbjct: 584 ATDTMLNKVYSHMLDRLVHGEHVFVTDVTGRYAQLNLQGPRSRELLQGLTSVDLNNFAFR 643 Query: 119 RFSIADVLLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFP----- 167 R D+ L R ++ + IV+ +F S Sbjct: 644 RAEEIDIGLARVLCIRITYVGELGYELFVPVEQARHVYDCIVELGREFSLSHAGLKALGS 703 Query: 168 -------HDALMDLLN-------GISL-----TKGCYIGQEVVS----RIQHRNIIRKRP 204 D D+ N G+ +G +IGQ+ V + R + KR Sbjct: 704 LRMEKGYRDYGHDMDNTDRLLDCGLGFTCDFEKEGGFIGQKHVLAQKDAAKERGGLLKRI 763 Query: 205 MIITGTDDLP--PSGSPILTDDIEIGTLG------VVVGKKALAIARID 245 + + D P G + D I + V G L++ D Sbjct: 764 VNVLVLDPAPLLHHGEILWKDGRRISDIRAASYGHTVGGAVGLSMLTRD 812 >gi|307727855|ref|YP_003911068.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1003] gi|307588380|gb|ADN61777.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1003] Length = 1000 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 83/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G I + ++ E ++ Sbjct: 666 STLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLGEQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99 + ++ L ++R V+ ++ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144 ++ +E T + ++ R S + L + E + + Y Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEYDITP 845 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ PHD M L S ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGMSGLVAKSKD---FLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLADDPSFVIPEGSQIVAG 928 >gi|86605926|ref|YP_474689.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. JA-3-3Ab] gi|86554468|gb|ABC99426.1| glycine cleavage system T protein [Synechococcus sp. JA-3-3Ab] Length = 378 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 95/313 (30%), Gaps = 65/313 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G L ++ +D+ + AR + +L P G I+ + + + + Sbjct: 54 SHMGKFDLWGPELGSHLSRLVPSDLGAVAVGSARYTVLLNPLGGIVDDVIFYRHPPEGEL 113 Query: 67 ----LEIDRSKRD--------------SLIDKLLFYKLRSNVIIEIQPING-------VV 101 L ++ + R L D S V++ +Q + Sbjct: 114 EHWSLIVNAATRQKDWEWLHQQGIPGLELQDHTE-----SQVLLAVQGPAAEEVLQPFLA 168 Query: 102 LSWNQEHTFSNSSFID--ERFSIADVLLHRTWGHNEK-------IASDIKTY-------- 144 S F + F ER S A V + RT E A + + Sbjct: 169 GSLRALRRFQHGQFATRKERSSGAGVFVARTGYTGEDGFELLLGPADGLWLWEQLVQAGV 228 Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 LR+ D + P +A + L +S G YIG+ + + Sbjct: 229 QPCGLGCRDTLRLEAAFCLYGQDI-DESTTPLEADLGWL--VS-NPGDYIGKPALESQRQ 284 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVG----KKALAIARIDKVDHA 250 + I R+ +P G I + IG + + + +D Sbjct: 285 QGIPRRLVGFRLLERAIPRRGYAIYAPNSPEPIGRVTSGTHSPTLGYGIGLGYVDSTWAK 344 Query: 251 IKKGMALTVHGVR 263 + + + + G R Sbjct: 345 VGSRLEIEIRGQR 357 >gi|86138496|ref|ZP_01057070.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. MED193] gi|85825021|gb|EAQ45222.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. MED193] Length = 1010 Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TL R + + G + ++++I+EDT++ Sbjct: 679 VKGPDAGKFLDMMYTNMMSTLKVGKCRYGLMCSENGFLSDDGVVARIDEDTWLCHTTTGG 738 Query: 74 RDSLIDKL 81 DS+ + Sbjct: 739 ADSIHAHM 746 >gi|307317067|ref|ZP_07596508.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83] gi|306897155|gb|EFN27900.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83] Length = 379 Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L+ ++ ADVL L R G IL +I D L ++ + +D+ Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129 Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113 + L L +I +Q P G VL W E + Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVAEADLHDV 187 Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159 S I R R H + + + LR+ G+ D Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247 Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 +T P +A ++ G + G + + R+R + + P Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAGRILAELTDGVSRRR-VGLRPEGRAP 305 Query: 215 PSGSPILTDDIE----IGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264 G+ L D E GT+ V G A+ + + + + + + Sbjct: 306 VRGNANLFADAEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365 Query: 265 KAS 267 + Sbjct: 366 AVT 368 >gi|218674309|ref|ZP_03523978.1| FAD dependent oxidoreductase [Rhizobium etli GR56] Length = 394 Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 79/278 (28%), Gaps = 56/278 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 + G+ A L I DV P + +L +G I +++I ED + + Sbjct: 74 LKGRDAEAALSWIAANDVAR-PEGSLIYTQMLNDKGGIECDLTVARIAEDEYYIVTGTGF 132 Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106 I L+D Y + R+ V ++ + Q Sbjct: 133 ATHDFNWIARNIPAELHAELVDVTSAYSVLSLMGPNARAVLEKVTGS--DVSNAAFPFGQ 190 Query: 107 EHT--FSNSSFIDERFSIADVLLH-----------------RTWGHNEKIASDIKTYHEL 147 T S R + L + G + + + Sbjct: 191 VRTIGISGCPVRALRITYVGELGYELHIPIEYATTVYDVLMAAGGELGLVNAGYRAIESC 250 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ G +D P P +A + + + K + G++ + R + ++ Sbjct: 251 RLEKGYRAWGSDIGPDHT-PVEAGLGW--AVKVRKNIPFRGRQAIERQLKEGVKKRLACF 307 Query: 207 ITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALAIAR 243 + D G I D +G L G + + Sbjct: 308 VPDDPDTVLLGRETIYRDGKRVGWLSS--GGFGYTLGK 343 >gi|17017279|gb|AAL33597.1| glycine cleavage complex T-protein [Zea mays] Length = 401 Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 95/304 (31%), Gaps = 52/304 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK IPFL+ ++ D+ L S + +G + +I+K+ +D L ++ Sbjct: 89 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 148 Query: 72 SKRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHT---------------FS 111 R+ + + ++ V I ++ F Sbjct: 149 GCREKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSQVYFG 208 Query: 112 NSSFID--------ERFSIADVLLHRTWGHNEKIA----------------SDIKTYHEL 147 +F+D R NE + + L Sbjct: 209 QFTFLDINGFPCYLTRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGLGARDSL 268 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206 R+ G+ D I P +A + G +G ++G EV+ + ++R Sbjct: 269 RLEAGLCLYGNDLE-QHITPIEAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVGF 327 Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261 I+ + S I + IG + KK +A+ + +H + + V G Sbjct: 328 IS-SGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVRG 386 Query: 262 VRVK 265 + Sbjct: 387 KPYE 390 >gi|294083833|ref|YP_003550590.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663405|gb|ADE38506.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum IMCC1322] Length = 786 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 80/282 (28%), Gaps = 48/282 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A L + ++ P A + ++ +G I + +++++ Sbjct: 467 SSFGKISITGRDAESMLNRLCANNMSR-PAGRATYTTMVNEKGGIKSDLTSLRFDDESYR 525 Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLS------------WNQEHTFSNS 113 L + S + L + V I I ++ + + Sbjct: 526 LYVGSSAIKRDLAWLREHVNANEQVEIHDHTIQFATIAVMGPKASVMMRSLGADWLDALG 585 Query: 114 SFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHEL----------------R 148 F R IA ++ W + Y+ L R Sbjct: 586 YFTHARNEIAGIMVDAVRLSYVGEAGWELTCACEDAERLYNVLNEAGARPAGTLAQSSMR 645 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MII 207 I + + P A + + +IG E + + + + + Sbjct: 646 IEKQFLAYGHELDTDVS-PMMAGLAFTIDMQYP---FIGHEAIQKAMETPAKQTIVSLRL 701 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARID 245 D +P P+ D IG LA+A ID Sbjct: 702 ADVDAVPLGNEPVYHDGQIIGKTTSASFGYRIGCPLALAYID 743 >gi|257055900|ref|YP_003133732.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] gi|256585772|gb|ACU96905.1| glycine cleavage system T protein (aminomethyltransferase) [Saccharomonospora viridis DSM 43017] Length = 925 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 90/267 (33%), Gaps = 57/267 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G + L + T + TL R + G +L + +++E+ ++ Sbjct: 588 STLGKIDVQGPDSGVLLDRLYTNMMSTLRVGRVRYGVMCGNDGMVLDDGTVLRLDENRYL 647 Query: 67 LEIDRSKRDSLID---------------KLL--------FYKL--RS-NVIIEIQPINGV 100 + +++D L F + RS +VI + P V Sbjct: 648 ITTTTGGAATVLDWMEEWLQTEWPELRVHLTSVTEQWSVFPVVGPRSRDVIGAVFPDLDV 707 Query: 101 ------VLSWNQEHTFSNSSFIDERFSI--------------ADVLLHRTWGHNEK---I 137 ++W + T + R S A L R EK Sbjct: 708 SNEAFPFMTWR-DTTLDDIPVRIARISFSGELAYEVNVNSWYAPALWQRLLAAGEKYGIT 766 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G D T+ P D M + +S K +IG+ +R ++ Sbjct: 767 PYGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSWV--VSKKKDDFIGKRSFARPENN 823 Query: 198 NIIRKR---PMIITGTDDLPPSGSPIL 221 N RK+ + + G LP GS I+ Sbjct: 824 NPQRKQLVSLLPVDGRTRLPE-GSQIV 849 >gi|195435113|ref|XP_002065546.1| GK14613 [Drosophila willistoni] gi|194161631|gb|EDW76532.1| GK14613 [Drosophila willistoni] Length = 409 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 64/308 (20%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK A ++ I TAD+L LP + G IL +++K+ E + + + Sbjct: 84 VRGKDAATCMETICTADILGLPNGSGTLTVFTNDNGGILDDLIVNKVNEKELYVVSNAAM 143 Query: 74 RD-------SLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + S + +V IE ++ + + + + D Sbjct: 144 KQQDMNIMSSAVSHFKSQG--KDVSIEFLTPSDQSLIAIQGPQAVAELAKLLAPQTQSLD 201 Query: 125 V-----------------------------------------LLHRTWGHNEKIASDIKT 143 L + + + + Sbjct: 202 QLYFMNSSTFNVNGLTNIRITRCGYTGEDGVEVSVPSTQVTSLTEALLANGKLKLAGLGA 261 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ G+ +D T P +A + L TK + G E V + + + Sbjct: 262 RDSLRLEAGLCLYGSDIDTQTT-PIEAALAWLVAKRRRATKD-FPGAETVLKQLKEGVSK 319 Query: 202 KRP-MIITGTDDLPP-SGSPILTDDIE--IGTLGVVV----GKKALAIARIDKVDHAIKK 253 +R + + GT P SG I D+ + +G + +A+ I + + Sbjct: 320 RRVGLKMLGTKPPPARSGIQIFNDEGKELVGQITSGCPSPSIGSNIAMGYIQEKLKKVGT 379 Query: 254 GMALTVHG 261 + L V Sbjct: 380 RVQLKVRD 387 >gi|167041170|gb|ABZ05929.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_001B09] Length = 998 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ I + G FL I T + LP AR +L G + ++I E+ Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 721 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122 F + ++ +++ L +Y V + P V VLS ++ + + + R + Sbjct: 722 HFHMTTTTAQAVNVLAHLEYY---LQV---VWPELNVNVLSTTEQWAGAALAGPNSR-EL 774 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLT 181 L T NE + Y E + G+ S ++ ++ G Sbjct: 775 LSKLFPETNILNEAL--PFMGYKESDL-FGVPARIFRISFSGELAYEINVESSYGTFMWE 831 Query: 182 KGCYIGQEVVS 192 K GQE+ Sbjct: 832 KIIEFGQEMNI 842 >gi|33593499|ref|NP_881143.1| sarcosine oxidase alpha subunit [Bordetella pertussis Tohama I] gi|33572855|emb|CAE42788.1| sarcosine oxidase alpha subunit [Bordetella pertussis Tohama I] gi|332382907|gb|AEE67754.1| sarcosine oxidase alpha subunit [Bordetella pertussis CS] Length = 979 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 66/327 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V +S I+V G A FL + + TL AR +L G + I++ E Sbjct: 646 VDVSTLGKIEVQGPDAGVFLDRVYANRISTLKVGKARYGVLLREDGIVFDDGTIARWGER 705 Query: 64 TFILEIDRSKRDSLIDKLLF--------YKLR---------------------------- 87 FIL + +++ F ++R Sbjct: 706 LFILSTTTANAAAVMSHFEFLLATAWPTLRVRVTSVTDHYAQIALAGPKSREVLERLQIS 765 Query: 88 SNVIIEIQPINGVVLS-WNQEHTFS-NSSFIDER---FSIADVLLHRTWGHNEKIASDI- 141 ++V P V + WN SF ER +IA R W + + Sbjct: 766 ADVTDSALPHMAVCETVWNGLKLLIYRVSFSGERAYELAIAAAYGQRLWDQLLAVGAPFS 825 Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + LRI G L D + G+ +G ++G+ ++ R Sbjct: 826 IMPYGTEAMGALRIEKGHPAGPE--LDGRTTAADLGL---GGLVKKEGAFVGKALLGREG 880 Query: 196 HRNIIRKRPMIITGTDDLP-PSGSPIL----TDDIEIGTLGVVV------GKKALAIA-- 242 + R + + SGS ++ E+G + AL Sbjct: 881 LQAADRPTLVGLRSKSGAAIQSGSMLVLRAEVGAQELGWVASATYSPTLGQHIALGFLVN 940 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFP 269 + + ++ ALT V V+ P Sbjct: 941 GANALGRSVLAWSALTSSQVEVEVVNP 967 >gi|323527817|ref|YP_004229970.1| glycine cleavage system T protein [Burkholderia sp. CCGE1001] gi|323384819|gb|ADX56910.1| glycine cleavage system T protein [Burkholderia sp. CCGE1001] Length = 372 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGARVRAFFEYALANNVGKLQTPGRALYSCLLNPQGGVIDDLIVYYFGEEHF 111 Query: 66 ILEIDRSKRDSLIDKLL 82 + ++ + I Sbjct: 112 RVVVNAGTAEKDIAWFK 128 >gi|158334699|ref|YP_001515871.1| glycine cleavage system T protein [Acaryochloris marina MBIC11017] gi|158304940|gb|ABW26557.1| glycine cleavage system T protein [Acaryochloris marina MBIC11017] Length = 374 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 82/284 (28%), Gaps = 63/284 (22%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--------------------KIEE 62 LQ ++ +D+ L A+ S L Q I+ + ++ Sbjct: 75 LQPLVPSDLSQLEPGQAKYSVFLNEQAGIIDDLIFYFEGISDSGAEIGKLIVNASTTAKD 134 Query: 63 DTFILE-IDRSKR----------------DSLIDKLLF-----------YKLRSNVIIEI 94 ++LE + I L Y+ +S I Sbjct: 135 KAWLLENVSAEAIGFEDVSDSHVLIAVQGPDAISTLQRFTPTDLSAIRNYRHQSG-TILE 193 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154 QP + E F +D L +T + LR+ + Sbjct: 194 QPAWFARTGYTGEDGFE--VMVDPE---TGKKLWQTLLEAGVAPCGLGARDTLRLEAAMA 248 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 D T P++A + L ++L +G +IGQ+ + + Q RK + + Sbjct: 249 LYGQDI-NDTTTPYEAGLGWL--VNLDQGEFIGQDTLKKQQAEGPPRKLVALEMQGRHIA 305 Query: 215 PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252 P+ +D E+G + ALA + Sbjct: 306 RHDYPVWVNDQEVGIVTSGSFSPTLGKSIALAYVPTAYAKSGTE 349 >gi|209524452|ref|ZP_03273001.1| glycine cleavage system T protein [Arthrospira maxima CS-328] gi|209495243|gb|EDZ95549.1| glycine cleavage system T protein [Arthrospira maxima CS-328] Length = 370 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 55/294 (18%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLIS------KIEEDTFILEIDRSKRDS----LIDK 80 + L A+ + +L G IL + ++ ++ + + ++ Sbjct: 77 LSRLQPGQAQYTVLLNGSGGILDDVIFYYQGLDPATGNQRGMMIVNAATKSRDKAWVVAH 136 Query: 81 LLFYKL------RSNVIIEIQ--------------PINGVVLSWNQEHTFSNSSFIDERF 120 L + RS V+I +Q ++ V + E T R Sbjct: 137 LEGTGVALEDLSRSQVLIAVQGPQAEAVLGSLVEADLSAVANFGHIETTLFGKPAFIART 196 Query: 121 -------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 V L R + LR+ + D + P Sbjct: 197 GYTGEDGFEVMVNPDTGVNLFRELIEVGATPCGLGARDTLRLEAAMALYGQDIDTHST-P 255 Query: 168 HDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDI 225 +A + L I KG +IG+E + Q + +R + + + G + Sbjct: 256 LEAGLGWL--IHWDEKGDFIGRESL-EAQKSGGLSRRLVGLEMQGRYIARHGYSVKAGGE 312 Query: 226 EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 +G + ALA ++ + + + +Y+ Sbjct: 313 VVGEITSGTMSPTLGKAIALAYVPVELAKIGSQVEVEIRNQIYPATVVKRPFYR 366 >gi|163739969|ref|ZP_02147374.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter gallaeciensis BS107] gi|161386714|gb|EDQ11078.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter gallaeciensis BS107] Length = 1010 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + V G A FL + T + TL R + + G ++ ++++I+EDT++ Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCSENGFLIDDGVVARIDEDTWL 731 Query: 67 LEIDRSKRDSLIDKL 81 + + + Sbjct: 732 CHTTTGGAERIHGHM 746 >gi|84514578|ref|ZP_01001942.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] gi|84511629|gb|EAQ08082.1| aminomethyl transferase family protein [Loktanella vestfoldensis SKA53] Length = 814 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 13/139 (9%) Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + LRI G D + +D I+ K ++G+ + + R + ++ Sbjct: 670 ALNALRIEKGYRAWKGDLSTDYSL-LEGGLDRF--INFDKPDFVGKPALLAEKQRGVAKR 726 Query: 203 RPMIITGTDDL--PPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKG 254 ++ D P + I D +G V AL + R D K Sbjct: 727 FVTLVLDDADAYDAPYMATISHDGAVVGETTSGAFGYRVGKSIALGMLRADLAVAGTKVA 786 Query: 255 MAL--TVHGVRVKASFPHW 271 + + T V+ P W Sbjct: 787 IDIYGTQVSATVQPDAPLW 805 >gi|303246601|ref|ZP_07332879.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ] gi|302491941|gb|EFL51819.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ] Length = 362 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 78/278 (28%), Gaps = 67/278 (24%) Query: 13 KVCGKSAIPFLQAI-ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + G+ A L + +T D+ TL R +L G ++ +I ++ D+++L ++ Sbjct: 58 HLSGEGAASAL-GLAVTHDLETLAPGKCRYGFLLNDAGGVVDDLIIYCLDVDSYMLVVNG 116 Query: 72 SKRD--------------------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105 ++ L L F LR V + + +W Sbjct: 117 ARIAVDFETVKSRLPAGLTFTDASAETAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFAWT 176 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINH 151 F + R L + + +K + + LR+ Sbjct: 177 D---FDGQKLMVSRTGYTGELGYELFLPADKAVALWEALLADPRVAPAGLGARDTLRLEM 233 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-----IRKRPMI 206 G D P +A L + S ++ +R++ + Sbjct: 234 GYPLYGQDL-DEEHTPAEAGYGWL--------------LTSPAEYAGKKGAGAVRQKLIA 278 Query: 207 ITGTDDLPPSGSPILTD--DIEIGTLGVVVGKKALAIA 242 + + D +G + +L A Sbjct: 279 LEIPGRRSARHGDAVKDKAGKTVGVVTSASFAPSLGHA 316 >gi|59808083|gb|AAH89599.1| Dimethylglycine dehydrogenase precursor [Mus musculus] Length = 869 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S+ Sbjct: 525 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 582 Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110 F+L + + R +V I+ I GV+ Sbjct: 583 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 642 Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140 S+ +F R S L + E A+ D Sbjct: 643 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 702 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ ++ T P +A ++ + L K +IG++ + +I+ Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKTE 759 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TDD+ P G+ I +G + A A + + Sbjct: 760 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 819 Query: 251 IKKGMALTVHGVRVKAS 267 + L Sbjct: 820 QQVEAELLGKNYPATII 836 >gi|327330601|gb|EGE72347.1| glycine cleavage system T protein [Propionibacterium acnes HL097PA1] Length = 371 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 42/104 (40%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGSALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKA 154 >gi|33598020|ref|NP_885663.1| sarcosine oxidase alpha subunit [Bordetella parapertussis 12822] gi|33574449|emb|CAE38787.1| sarcosine oxidase alpha subunit [Bordetella parapertussis] Length = 979 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 66/327 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V +S I+V G A FL + + TL AR +L G + I++ E Sbjct: 646 VDVSTLGKIEVQGPDAGVFLDRVYANRISTLKVGKARYGVLLREDGIVFDDGTIARWGER 705 Query: 64 TFILEIDRSKRDSLIDKLLF--------YKLR---------------------------- 87 FIL + +++ F ++R Sbjct: 706 LFILSTTTANAAAVMSHFEFLLATAWPTLRVRVTSVTDHYAQIALAGPKSREVLERLQIS 765 Query: 88 SNVIIEIQPINGVVLS-WNQEHTFS-NSSFIDER---FSIADVLLHRTWGHNEKIASDI- 141 ++V P V + WN SF ER +IA R W + + Sbjct: 766 ADVTDSALPHMAVCETVWNGLKLLIYRVSFSGERAYELAIAAAYGQRLWDQLLAVGAPFS 825 Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + LRI G L D + G+ +G ++G+ ++ R Sbjct: 826 IMPYGTEAMGALRIEKGHPAGPE--LDGRTTAADLGL---GGLVKKEGAFVGKALLGREG 880 Query: 196 HRNIIRKRPMIITGTDDLP-PSGSPIL----TDDIEIGTLGVVV------GKKALAIA-- 242 + R + + SGS ++ E+G + AL Sbjct: 881 LQAADRPTLVGLRSKSGAAIQSGSMLVLRAEVGAQELGWVASATYSPTLGQHIALGFLVN 940 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFP 269 + + ++ ALT V V+ P Sbjct: 941 GANALGRSVLAWSALTSSQVEVEVVNP 967 >gi|83594381|ref|YP_428133.1| glycine cleavage system aminomethyltransferase T [Rhodospirillum rubrum ATCC 11170] gi|83577295|gb|ABC23846.1| Glycine cleavage system T protein [Rhodospirillum rubrum ATCC 11170] Length = 375 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 45/266 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G I L+A++ D+ L R + + QG IL +++K +D F+ Sbjct: 61 SHMGQARLVGPQRIAALEALVPGDLEILKEGRQRYTVLTNDQGGILDDLMVTKRADDLFL 120 Query: 67 LEIDRSKRDSLIDKLLFY---------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + ++ + +D+ +D + + +L ++ +Q V + + + F+ Sbjct: 121 V-VNAACKDADLDHIEAHLAGFDARLERLPDTALLALQGPLAVSVLAGLDARAAEMGFMS 179 Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIA-SDIKTYHELRIN 150 R+ + A + L +T NE +A + LR+ Sbjct: 180 GRWLSLCGVDCFVTRSGYTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSLRLE 239 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ +D T P +A + + G +G + G + + + R R Sbjct: 240 AGLCLYGSDIDT-TTTPVEAGLSWIIGKRRRAEGGFPGASAIQQDLAQGPKRCRV----- 293 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG 235 P +P+ +G G VVG Sbjct: 294 -GLRPEGKAPVRAHSAILGPQGEVVG 318 >gi|163761533|ref|ZP_02168605.1| sarcosine oxidase alpha subunit [Hoeflea phototrophica DFL-43] gi|162281247|gb|EDQ31546.1| sarcosine oxidase alpha subunit [Hoeflea phototrophica DFL-43] Length = 988 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 28/72 (38%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A FL + L LP AR +L G I S++ + F + Sbjct: 658 IEIMGADAAEFLNRVYANGFLKLPVGKARYGLMLREDGHIFDDGTTSRLGDQHFFMTTTT 717 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 718 AYAAEVMTHLEF 729 >gi|3334202|sp|P93256|GCST_MESCR RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|1724108|gb|AAB38502.1| aminomethyltransferase precursor [Mesembryanthemum crystallinum] Length = 408 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 96/305 (31%), Gaps = 54/305 (17%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + GK IPFL+ ++ D+ L S + +G + +I+K+ +D L ++ Sbjct: 90 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 149 Query: 72 SKRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHT---------------FS 111 R+ + + ++ V I ++ F Sbjct: 150 GCREKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSKFYFG 209 Query: 112 NSSFID--------ERFSIADVLLHRTWGHNEKIASDIK-----------------TYHE 146 +F+D R NE A D+ Sbjct: 210 QFTFLDINGFPCYLTRTGYTGEDGFEISVPNE-YAVDLAKAMLEKSEGKVRLTGRGARDS 268 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D I P +A + G +G ++G EV+ + ++R Sbjct: 269 LRLEAGLCLYGNDLE-QHITPIEAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVG 327 Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 I+ + S I + IG + KK +A+ + +H + + V Sbjct: 328 FIS-SGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVR 386 Query: 261 GVRVK 265 G + Sbjct: 387 GKPYE 391 >gi|255261195|ref|ZP_05340537.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62] gi|255103530|gb|EET46204.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62] Length = 383 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 26/56 (46%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G A + + T +V + + ++IL GK + +I + +++++ Sbjct: 62 VHVTGPDAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHLAVNSWLV 117 >gi|301770371|ref|XP_002920589.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Ailuropoda melanoleuca] gi|281338347|gb|EFB13931.1| hypothetical protein PANDA_009348 [Ailuropoda melanoleuca] Length = 403 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 85/272 (31%), Gaps = 48/272 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G + +++++ D+ L S G IL +++ E + + Sbjct: 88 KILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSNAG 147 Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 RD + L+ K+R S+V +E+ + L + D Sbjct: 148 CRDKDLA-LMQDKVRELQNEGSDVSLEVVDNALLALQGPTAAQVLQAGVADDLRKLPFMT 206 Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149 E F ++ + R + E + + LR+ Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVHLATALLENPEVKLAGLAARDSLRL 266 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 G+ +D P + + G + G V+ Q + +++R + + Sbjct: 267 EAGLCLYGSDI-DEHTTPVEGSLSWTLGKRRRAAVDFPGASVIV-AQLKGKVQRRRVGLM 324 Query: 209 GTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239 + SPIL T+ IGT+ L Sbjct: 325 CEGAPMRAHSPILNTEGTVIGTVTSGCPSPCL 356 >gi|242279398|ref|YP_002991527.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM 2638] gi|242122292|gb|ACS79988.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM 2638] Length = 353 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ K+ GK A L +++ ++ TL R + +G +L +I + ED+++ Sbjct: 52 SHMGEFKLSGKGAKDGLNKLVSQNLDTLAPGKCRYGFLPNDKGGVLDDLIIYCLAEDSYM 111 Query: 67 LEI 69 L + Sbjct: 112 LVV 114 >gi|296415481|ref|XP_002837415.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633286|emb|CAZ81606.1| unnamed protein product [Tuber melanosporum] Length = 421 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71 ++ G A+PFL + +D+ LP + S L P G I+ +I+ + F + + Sbjct: 92 RLTGPGALPFLHFVTPSDLTRLPQFQSTLSVFLHPTTGGIVDDLIITSHGPEDFYIVTNA 151 Query: 72 SKRDSLIDKLLF 83 + +D + + Sbjct: 152 ACKDKDLAYMAR 163 >gi|226362069|ref|YP_002779847.1| glycine cleavage system aminomethyltransferase T [Rhodococcus opacus B4] gi|226240554|dbj|BAH50902.1| aminomethyltransferase [Rhodococcus opacus B4] Length = 371 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 6/107 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G + L + ++ + A+ S + G ++ ++ ++ + F Sbjct: 53 LSHMGEIAVTGTESGALLDYALAGELSKIGVGRAKYSLLCNADGGVIDDLVVYRLANEHF 112 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEHT 109 ++ + S ++ +L R+ ++ Q +++ Sbjct: 113 LVVANASNAPAVYREL---AARAEGFSATVDDQSAETALIAVQGPAA 156 >gi|260576517|ref|ZP_05844506.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2] gi|259021240|gb|EEW24547.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2] Length = 975 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T +LP R +L G +L +++ + Sbjct: 645 CDVSTLGKIDIQGADAARFLDLVYTNTFSSLPVGRVRYGLMLREDGHVLDDGTTARLGDS 704 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 705 HFLMTTTTAAAGLVMRHLDF 724 >gi|124027706|ref|YP_001013026.1| glycine cleavage system aminomethyltransferase T [Hyperthermus butylicus DSM 5456] gi|123978400|gb|ABM80681.1| Aminomethyltransferase [Hyperthermus butylicus DSM 5456] Length = 378 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 60/289 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + I V G A L ++ + + P + +A L + ++ + + + Sbjct: 50 LSHMARIIVSGPDAGKLLDKLVPRYLESEPGTMLGPTAFLNENAGFVDDVMLYNLGGNQW 109 Query: 66 ILEIDR-------------------------------------SKRDSLIDK-------- 80 ++ + K L+++ Sbjct: 110 MIVANAVNREKVLGWLNDWLSRLGFTASVEDKTLELAMFAVQGPKAAELMERLGAPREVL 169 Query: 81 -LLFYKLRSNVIIEIQPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136 L + R NV + ++S W E F + + E A+ +L + + Sbjct: 170 ELKLLRFRLNVELSEAKARAFLVSRSGWTGEDGFEIIAPVGE----AEKILRKAAEIVRE 225 Query: 137 IA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + + LR+ G V + P DA + + C +G + + Sbjct: 226 LGGRLCGLGARDSLRMEMGFVLYGHEI-DEETTPVDARYWWVYQPGPKEDC-VGCKALRE 283 Query: 194 IQHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALA 240 R ++ R I +P G I + +E+G + L Sbjct: 284 ALRRGAVKVRVGIRLSKKARIVPRQGDKIYVEGVEVGHVTSGAYSPVLG 332 >gi|114765450|ref|ZP_01444560.1| sarcosine oxidase, alpha subunit family protein [Pelagibaca bermudensis HTCC2601] gi|114542160|gb|EAU45191.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. HTCC2601] Length = 1012 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 89/319 (27%), Gaps = 74/319 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TLP R + G ++ ++ ++ ED+++ Sbjct: 672 STLGKILVKGPDAGRFLDMMYTNMMSTLPVGKCRYGLMCNENGFLMDDGVVVRLSEDSWL 731 Query: 67 LEIDRSKRDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQEH------- 108 D + + Y + + Sbjct: 732 CHTTSGGADHVHAHMEDWLQCEWWDWKVY------TANLTEQYAQIAVVGPNARKLLEKL 785 Query: 109 --------TFSNSSFIDERFSIADVLLHRT--------------------WGHNEKIASD 140 ++ D R + V ++R WG + ++ Sbjct: 786 GGMDVSKEAMPFMTWADGRLADTPVRVYRISFSGELSYEIAVPANRGRAFWGKLLEAGAE 845 Query: 141 I-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 + H +R G + + T+ P D + IS K ++G+ R Sbjct: 846 WNITPYGTEALHVMRAEKGFIMIGDE-SDGTVIPQDLGLHW--AISKKKEDFLGKRAQQR 902 Query: 194 IQHRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAI 241 R + + + T + P G+ + G K +A+ Sbjct: 903 PDMARDGRWQLVGLETLDGSVLPDGAYAIAAGKNANGQRNTQGRVTSTYFSPTLNKGIAM 962 Query: 242 ARIDKVDHAIKKGMALTVH 260 ++ + + ++ T Sbjct: 963 GLVEHGPDRMGEVLSFTAE 981 >gi|71409827|ref|XP_807238.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener] gi|70871196|gb|EAN85387.1| glycine cleavage T-protein, putative [Trypanosoma cruzi] Length = 373 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47 S+ F +V G F + + + V L + + + Sbjct: 54 SHVGFFEVWGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLA 113 Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86 +GKI+ + +++ + D ++E+DR S +++L K Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173 Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145 R +V ++ I S++ E F I + ++LL + + + + Sbjct: 174 GRRSVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200 LR G+ + + + P A LM + + +G +IG E V R + + Sbjct: 230 SLRTEAGLCLYSHEL-SEEVNPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287 Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255 R R I++ + +G PIL D+ +G + V + +AI ID+ + + Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAIGYIDRAKARAGETV 347 Query: 256 ALTVHGVRV--KASFP 269 L V G R+ + + P Sbjct: 348 ELEVRGKRLPGEVTLP 363 >gi|167571718|ref|ZP_02364592.1| glycine cleavage system aminomethyltransferase T [Burkholderia oklahomensis C6786] Length = 372 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|15890760|ref|NP_356432.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] gi|15159038|gb|AAK89217.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 987 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 18/190 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++CGK A FL + L LP AR +L G I S++EE+ F + Sbjct: 657 IEICGKDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGMIYDDGTTSRLEENRFFMTTTT 716 Query: 72 SKRDSLIDKLLF--YKLRSNVIIEIQPINGVVLSWNQ-------------EHTFSNSSFI 116 + +++ L F L ++ + + + + S+ +F Sbjct: 717 AYAAGVMNHLEFCAQALWPDLDVRLASVTDQWAQMAIAGPKARDILQRIVDDDISDEAFP 776 Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP---HDALMD 173 + + G +I+ + +EL + G + D L P ++ Sbjct: 777 FLAAKEVSLFGGQLHGRLFRISFSGELAYELAVPAGYGESVADALMEAGAPEGIMPYGVE 836 Query: 174 LLNGISLTKG 183 L + + KG Sbjct: 837 ALGVLRIEKG 846 >gi|254516183|ref|ZP_05128243.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3] gi|219675905|gb|EED32271.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3] Length = 370 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 46/291 (15%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82 L++++ D+ L + + +G + +I++ F L ++ S + + Sbjct: 68 LESLVPVDLQALGEHRQSYALLTNDEGGVRDDLIITRWGAHAFFLVVNASCKAQDRTWIE 127 Query: 83 F-----YKLR---------------SNVIIEIQPINGVVLSWNQEHTFSN--------SS 114 LR +V+ + P + H + S Sbjct: 128 SNLSAGQSLRELDGQGLLALQGPRARDVLSSLLPETAALTFLQGAHCELDGMPVYVTCSG 187 Query: 115 FIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 + E + + H + LR+ G+ + P TI P Sbjct: 188 YTGEDGYELSMAAEHTGIFARKLLSHEATEPVGLGARDSLRLESGLCLYGHELSP-TITP 246 Query: 168 HDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLPPSGSPIL 221 +A ++ S G Y G E ++R R R M + G + + Sbjct: 247 IEAKLNWSISKSRRPDGERAGGYPGAERIARQLSEGTARVRIGMRVLGKRPVREGQEVLN 306 Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 D +G + +A+A +D A+ + + V G + Sbjct: 307 GDGEVVGVITSGAYAATVDAPIAMAFVDSAYAALDTELGVYVRGKTLPVVV 357 >gi|212704331|ref|ZP_03312459.1| hypothetical protein DESPIG_02386 [Desulfovibrio piger ATCC 29098] gi|212672293|gb|EEB32776.1| hypothetical protein DESPIG_02386 [Desulfovibrio piger ATCC 29098] Length = 360 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 78/256 (30%), Gaps = 51/256 (19%) Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86 ++ ++ TL R +LT +G +L ++ + D F++ ++ + L +L Sbjct: 71 MSHNLATLAPGRCRYGFLLTEKGTVLDDCIVYRFGPDDFMVVVNAACAAGDFATLRA-RL 129 Query: 87 RSNV----------IIEIQPINGV----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132 V I++Q V L F E + ++L+ RT Sbjct: 130 PEGVALDDISEQTGKIDLQGPEAVDVLETLLGRSLRDMPYFGFRSEGWQGCELLVSRTGY 189 Query: 133 HNE-------KIASDIKTYHE-----------------LRINHGIVDPNTDFLPSTIFPH 168 E + LR+ G+ + + P Sbjct: 190 TGELGFELYVPAGQTQALWEALLADERVKPVGLGARDTLRLEAGLPLYGHELDENHT-PA 248 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIE 226 +A M + + Y+G+E +R++ + ++ + +L D Sbjct: 249 EAGM---GRMLTSTAPYVGREGAQ------EVRQKLLALSIEGRRAARNGDALLLEDGTP 299 Query: 227 IGTLGVVVGKKALAIA 242 G + +L Sbjct: 300 AGVVTSGSFAPSLGHV 315 >gi|167582792|ref|ZP_02375666.1| glycine cleavage system T protein [Burkholderia thailandensis TXDOH] gi|167620912|ref|ZP_02389543.1| glycine cleavage system T protein [Burkholderia thailandensis Bt4] Length = 372 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|167838377|ref|ZP_02465236.1| glycine cleavage system aminomethyltransferase T [Burkholderia thailandensis MSMB43] Length = 372 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|260427603|ref|ZP_05781582.1| sarcosine oxidase, alpha subunit [Citreicella sp. SE45] gi|260422095|gb|EEX15346.1| sarcosine oxidase, alpha subunit [Citreicella sp. SE45] Length = 1012 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TLP R + G ++ ++ ++ ED+++ Sbjct: 672 STLGKILVKGPDAGRFLDMMYTNMMSTLPVGKCRYGLMCNENGFLMDDGVVVRLSEDSWL 731 Query: 67 LEIDRSKRDSLIDKL 81 D + + Sbjct: 732 CHTTSGGADHVHAHM 746 >gi|330965678|gb|EGH65938.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L QG ++ ++ D + Sbjct: 50 SHMNVIDVLGGEAKAWLRRLLANDVDKLKTPGRALYSAMLDEQGGVIDDMIVYLT-TDGY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|123967111|ref|YP_001012192.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus marinus str. MIT 9515] gi|166221563|sp|A2BZ74|GCST_PROM5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|123201477|gb|ABM73085.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Prochlorococcus marinus str. MIT 9515] Length = 370 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 94/315 (29%), Gaps = 58/315 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63 S+ I + G + ++Q ++ + + IL +G I+ +I + E D Sbjct: 51 SHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLILNEKGGIIDDLIIYDLGRQEGD 110 Query: 64 --TFILEIDRSKRDSLIDKLL----------FYKLRSNVIIEIQPINGVVLS--WNQ--- 106 L ++ S+ + V++ IQ N L W Sbjct: 111 ISEIFLIVNASRYQDDFLWIKNNLNTNQVSVSNAKTDKVLLSIQGRNSFTLFEEWIGSSI 170 Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------- 144 +H + F FS S I + Sbjct: 171 SHIPYFGCEYKNFDHISTEGKFF---FSKTGYTGENGLEILLPAQSAINLWDFLVSRNIQ 227 Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G+ D P++A + L + + G++ + + Sbjct: 228 PCGLGARDTLRLEAGMHLYGQDL-DEKTTPYEAGLGWLVNLENNHE-FFGRDFLEKQSKL 285 Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKK 253 I +K + + G + D+ IG + KA+A A I A+ Sbjct: 286 GIKKKLVGLTIEGRAIGRKGCEVFKDEKYIGIITSGTWSPTTEKAIAFAYIQNSYAALNN 345 Query: 254 GMALTVHGVRVKASF 268 + + + G + KA+ Sbjct: 346 VVEVLIRGKKFKATI 360 >gi|289739909|gb|ADD18702.1| mitochondrial aminomethyltransferase precursor [Glossina morsitans morsitans] Length = 420 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 62/283 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V GK AI +++I TAD+ + G IL +++++ + + + + Sbjct: 97 VHGKDAIECIESICTADIHNTSNANGSLTVFTNSAGCILDDLIVTRVNDKQLYVVSNAAM 156 Query: 74 RDSLIDKLLFYKLRSN-----VIIE-IQPINGVVLSWNQEHTFSN--------------- 112 + + + + V IE + P + +++ + Sbjct: 157 KQQDMALMEAAVAKRKAEGKDVSIEFLSPKDQSLIALQGPSSVKALANLTKANLQQLYFM 216 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIA--------------------------SDIKTYHE 146 ++ I E + D + R E + + Sbjct: 217 TTIISEVAGVNDCRITRCGYTGEDGVEISVPSSKIKHVTESLLQQTNGNVKMAGLGARDS 276 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D +T P + + L ++ G E++ + Sbjct: 277 LRLEAGLCLYGNDIDSNTT-PIEGALAWLVAKRRRAELNF-----PGAEIIVNQLKSGVQ 330 Query: 201 RKRPMIITGTDDLPPS---GSPILTDDIEIGTLGVVVGKKALA 240 ++R + T PP G+ I +++E+G + +L Sbjct: 331 KRRIGLKLSTAGKPPPARSGAHIYHNNVEVGYVTSGCPSPSLG 373 >gi|167564570|ref|ZP_02357486.1| glycine cleavage system aminomethyltransferase T [Burkholderia oklahomensis EO147] Length = 372 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|163743195|ref|ZP_02150577.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter gallaeciensis 2.10] gi|161383612|gb|EDQ07999.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter gallaeciensis 2.10] Length = 1010 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S + V G A FL + T + TL R + + G ++ ++++I++DT++ Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCSENGFLIDDGVVARIDDDTWL 731 Query: 67 LEIDRSKRDSLIDKL 81 + + + Sbjct: 732 CHTTTGGAERIHGHM 746 >gi|83719545|ref|YP_443749.1| glycine cleavage system T protein [Burkholderia thailandensis E264] gi|83653370|gb|ABC37433.1| glycine cleavage system T protein [Burkholderia thailandensis E264] Length = 584 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 264 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 323 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 324 RVVVNAGTAD 333 >gi|21311901|ref|NP_083048.1| dimethylglycine dehydrogenase, mitochondrial precursor [Mus musculus] gi|48428488|sp|Q9DBT9|M2GD_MOUSE RecName: Full=Dimethylglycine dehydrogenase, mitochondrial; AltName: Full=ME2GLYDH; Flags: Precursor gi|12836171|dbj|BAB23536.1| unnamed protein product [Mus musculus] gi|151357477|emb|CAO77970.1| dimethylglycine dehydrogenase precursor [Mus musculus] Length = 869 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ + L + + + S +LTP+G++ +S+ Sbjct: 525 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 582 Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110 F+L + + R +V I+ I GV+ Sbjct: 583 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 642 Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140 S+ +F R S L + E A+ D Sbjct: 643 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 702 Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 TY + LR+ ++ T P +A ++ + L K +IG++ + +I+ Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKTE 759 Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250 + R+ + TDD+ P G+ I +G + A A + + Sbjct: 760 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 819 Query: 251 IKKGMALTVHGVRVKAS 267 + + L Sbjct: 820 QQVEVELLGKNYPATII 836 >gi|288933610|ref|YP_003437669.1| glycine cleavage system protein T [Klebsiella variicola At-22] gi|288888339|gb|ADC56657.1| glycine cleavage system T protein [Klebsiella variicola At-22] Length = 364 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 64/316 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERF 120 L ++ + R+ + + Y L I ++ ++ Q + + F D + Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGL----EITVRDDLSLIAVQGPQAKAKAATLFTDAQR 165 Query: 121 SIADVL-----------------------------------LHRTWGHNEKIASDIKTYH 145 + + R + Sbjct: 166 QAVEGMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARD 225 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI------ 199 LR+ G+ + P A M +IG+E + + + Sbjct: 226 TLRLEAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQMVGL 284 Query: 200 ------IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 + + + + TD I+T TLG ++A+AR+ Sbjct: 285 VMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTA 338 Query: 254 GMALTVHGVRVKASFP 269 + + + VK + P Sbjct: 339 VVQIRNREMPVKVTKP 354 >gi|156101487|ref|XP_001616437.1| aminomethyltransferase, mitochondrial precursor [Plasmodium vivax SaI-1] gi|148805311|gb|EDL46710.1| aminomethyltransferase, mitochondrial precursor, putative [Plasmodium vivax] Length = 400 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 90/304 (29%), Gaps = 75/304 (24%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68 + +K+ G FL+ + +D+ L R S +L +G I+ +I + E+ +L Sbjct: 79 RPILKISGADKTHFLEKYVGSDIKGLWENECRISLLLNEKGGIVDDIVII-LRENHLLLY 137 Query: 69 IDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSW------------NQEH 108 ++ +D + L +V IE + + + Sbjct: 138 LNIQCKDKVFSYLNEKLLENTKM-----DVKIEEYTSHRSICIQGSKSANVLNEIIGDDT 192 Query: 109 TFSNSSFIDE--------------RFSIADVLLHRTWGHNEKIAS--------------D 140 N SF+ R++ N+ + Sbjct: 193 YLENCSFMSSNVTKLNKIEGCVLNRYTCTGEDGFDILVPNKHVGELYQCILNNSLVKPGG 252 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRI 194 ++ + LR+ G D + P ++ + G + G V+ Sbjct: 253 LEVLNTLRLESGFCVYGKDI-NEKLTPIESNYKWVLGQRRLKELDFN-----GAHVIINQ 306 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARID 245 KR +I + +P S I T++ EIG + V A+ + + Sbjct: 307 IKNGTTIKRVGLIMDSTIVPKENSKIYTNENAHEEIGYITSSVFSPLLQKPIAMGYIKTE 366 Query: 246 KVDH 249 Sbjct: 367 HAAA 370 >gi|126135056|ref|XP_001384052.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054] gi|126091250|gb|ABN66023.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054] Length = 393 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 G A LQ I D+ LP + S +L G ++ +I+K E+ + + + R Sbjct: 74 SGVDAKNLLQKITPIDLSQLPVNSSSLSVLLNENGGVIDDCIITKHGEEKYYMVTNAGCR 133 Query: 75 DSLIDKLLF 83 I + Sbjct: 134 AKDISFIKK 142 >gi|221214248|ref|ZP_03587220.1| glycine cleavage system T protein [Burkholderia multivorans CGD1] gi|221165903|gb|EED98377.1| glycine cleavage system T protein [Burkholderia multivorans CGD1] Length = 372 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G A F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRARAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|254461091|ref|ZP_05074507.1| aminomethyl transferase family protein [Rhodobacterales bacterium HTCC2083] gi|206677680|gb|EDZ42167.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 381 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 26/56 (46%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G A + + T +V + + ++IL GK + +I + +++++ Sbjct: 62 VHVTGPDAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHLAVNSWLV 117 >gi|221202132|ref|ZP_03575167.1| glycine cleavage system T protein [Burkholderia multivorans CGD2M] gi|221209060|ref|ZP_03582055.1| glycine cleavage system T protein [Burkholderia multivorans CGD2] gi|221171055|gb|EEE03507.1| glycine cleavage system T protein [Burkholderia multivorans CGD2] gi|221177926|gb|EEE10338.1| glycine cleavage system T protein [Burkholderia multivorans CGD2M] Length = 372 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G A F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRARAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|291415243|ref|XP_002723863.1| PREDICTED: dimethylglycine dehydrogenase [Oryctolagus cuniculus] Length = 832 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 85/281 (30%), Gaps = 58/281 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS + G+ ++ L + V + S +LTP+G++ +S Sbjct: 498 IDLSPFGKFHIKGRDSVTLLDNLFANVVPKV--GFTNISHMLTPRGRVYAELTVSHQAPG 555 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQ----------EHTF 110 F+L + + +R +EI GV+ Sbjct: 556 DFLLVTGSGSELHDLRWIEEAAIRGGYEVEISNTTDELGVLGVAGPRARQVLQKLTSEDL 615 Query: 111 SNSSF----IDE-----------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 S+ +F + R S L + E Y L +N G + Sbjct: 616 SDGAFKFLQVKPLKVAHVPVTAIRISYTGELGWELYHRRED---SPALYEAL-MNAGQEE 671 Query: 156 PNTDFLPS--------------------TIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194 DF P +A ++ + L K +IG+ + +I Sbjct: 672 GIADFGTYALNVLRLEKAFRAWGAEMNCDTNPLEAGLEPF--VKLDKPADFIGKHALRQI 729 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234 + + R+ + TDD+ P G+ + + +G Sbjct: 730 KASGLKRRLVCLTLATDDVDPEGNESVWYEGKVVGNTTSGA 770 >gi|262042551|ref|ZP_06015708.1| aminomethyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330011904|ref|ZP_08307188.1| aminomethyltransferase [Klebsiella sp. MS 92-3] gi|259040111|gb|EEW41225.1| aminomethyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534051|gb|EGF60699.1| aminomethyltransferase [Klebsiella sp. MS 92-3] Length = 375 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 61 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 120 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + I ++ ++ Q + + F D + + Sbjct: 121 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 180 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 181 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 240 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199 G+ + P A M +IG+E + + + Sbjct: 241 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 299 Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 300 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 353 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 354 RNREMPVKVTKP 365 >gi|156848479|ref|XP_001647121.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM 70294] gi|156117805|gb|EDO19263.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM 70294] Length = 394 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A+ FL + + L S +L G I+ +I+KI ++ F + + Sbjct: 71 RLSGKEAMDFLHRVTPTEYKGLQSNNGTLSVLLNSTGGIVDDTMITKINDEEFYIVTNAG 130 Query: 73 KRDSLIDKLL 82 + ++ + Sbjct: 131 CVERDLEFIK 140 >gi|152971859|ref|YP_001336968.1| glycine cleavage system aminomethyltransferase T [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166221555|sp|A6TDR7|GCST_KLEP7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|150956708|gb|ABR78738.1| aminomethyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 364 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + I ++ ++ Q + + F D + + Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIVMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199 G+ + P A M +IG+E + + + Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288 Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 343 RNREMPVKVTKP 354 >gi|206579883|ref|YP_002236632.1| glycine cleavage system T protein [Klebsiella pneumoniae 342] gi|206568941|gb|ACI10717.1| glycine cleavage system T protein [Klebsiella pneumoniae 342] Length = 375 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 61 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 120 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + I ++ ++ Q + + F D + + Sbjct: 121 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 180 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 181 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 240 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199 G+ + P A M +IG+E + + + Sbjct: 241 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 299 Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 300 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 353 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 354 RNREMPVKVTKP 365 >gi|330965472|gb|EGH65732.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1006 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 731 MTTTTGGAARVLQWLEIY 748 >gi|238896450|ref|YP_002921188.1| glycine cleavage system aminomethyltransferase T [Klebsiella pneumoniae NTUH-K2044] gi|238548770|dbj|BAH65121.1| aminomethyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 364 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + I ++ ++ Q + + F D + + Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199 G+ + P A M +IG+E + + + Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288 Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 343 RNREMPVKVTKP 354 >gi|257481789|ref|ZP_05635830.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 360 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMNVIDVVGRQARTWLRHLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|326388296|ref|ZP_08209899.1| hypothetical protein Y88_0328 [Novosphingobium nitrogenifigens DSM 19370] gi|326207462|gb|EGD58276.1| hypothetical protein Y88_0328 [Novosphingobium nitrogenifigens DSM 19370] Length = 819 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 96/308 (31%), Gaps = 55/308 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----I 69 + G A +L ++++ V S +LT +G + F + K T+ L + Sbjct: 504 ITGPGAEDWLNSLLSNTVPK-KVGKVALSYLLTDEGGVRAEFTVYKKAPQTYYLVSAGAL 562 Query: 70 DRSKRDSLIDKL------LFYKLR-----------------SNVIIEIQPINGVVLSWNQ 106 +R +D L+ L F +L + V Q Sbjct: 563 ERHDQDYLLKALPNDGSVRFERLTTAMGVLVLAGPKARDVLAKVTRTDLSNEAFPWLTGQ 622 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNE------------KIASDIKTYHELRINHGIV 154 + + R + L E DIK + + + Sbjct: 623 SISIGGAKVDALRVNFIGELGWEFHHPIEMQNYIFDKLMEAGAEFDIKPFGIRAMTSMAL 682 Query: 155 DPNTDFLPSTIFP----HDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITG 209 + + +P + ++ +D IS K + G+E +++R + + + + G Sbjct: 683 EKSYKLIPRELSIEYAALESGLDRF--ISFKKPAFKGREGLLARKEAGLKWKLVTLEVFG 740 Query: 210 TDDLPPSGS-PILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGV 262 D GS PI D + +G V ALA+ + + +++ G Sbjct: 741 VTDADARGSEPIYRDGVLVGRATSGGYGWRVGKSLALAMVAPEHGALGTELEISILGKGH 800 Query: 263 RVKASFPH 270 + P Sbjct: 801 KA-VVIPD 807 >gi|290511324|ref|ZP_06550693.1| glycine cleavage system T protein [Klebsiella sp. 1_1_55] gi|289776317|gb|EFD84316.1| glycine cleavage system T protein [Klebsiella sp. 1_1_55] Length = 364 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124 L ++ + R+ + + + I ++ ++ Q + + F D + + Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169 Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149 + R + LR+ Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199 G+ + P A M +IG+E + + + Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288 Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257 + + + + TD I+T TLG ++A+AR+ + + Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342 Query: 258 TVHGVRVKASFP 269 + VK + P Sbjct: 343 RNREMPVKVTKP 354 >gi|120597561|ref|YP_962135.1| glycine cleavage system aminomethyltransferase T [Shewanella sp. W3-18-1] gi|146294298|ref|YP_001184722.1| glycine cleavage system aminomethyltransferase T [Shewanella putrefaciens CN-32] gi|166221570|sp|A4YAE0|GCST_SHEPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221572|sp|A1RFY6|GCST_SHESW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|120557654|gb|ABM23581.1| glycine cleavage system T protein [Shewanella sp. W3-18-1] gi|145565988|gb|ABP76923.1| glycine cleavage system T protein [Shewanella putrefaciens CN-32] Length = 364 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A FL+ ++ DV L A S +L I+ + + + + Sbjct: 50 SHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFY 109 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + ++ + R+ + + ++ + +P ++ ++ Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDITVTERPELAMIAVQGPNAKAKAAAV 159 >gi|331009423|gb|EGH89479.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 360 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMNVIDVVGRQARTWLRHLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|118378042|ref|XP_001022197.1| glycine cleavage system T protein [Tetrahymena thermophila] gi|89303964|gb|EAS01952.1| glycine cleavage system T protein [Tetrahymena thermophila SB210] Length = 1724 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 48/278 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ +K+ GK ++ F++ +I D+ P S IL I+ +++K Sbjct: 66 SLFDVSHMGQVKIRGKDSVDFIEKLIVGDIRGKPVAEGFLSLILNKNAGIIDDTIVTKF- 124 Query: 62 EDTFILEIDRSKRDSLIDKLLFYK--LR--SNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 +D + ++ + + ++ + K S+V IE ++ + + D Sbjct: 125 DDHIHMVVNGANKYIDLEHMKKLKEEFFANSDVSIEYLDTRQLIAIQGPKAAQVLQNLTD 184 Query: 118 ERFSI--------------------------------------ADVLLHRTWGHNEKIAS 139 S A L + + Sbjct: 185 TDLSKIKFMHHVDLTLKGGMKVNACRCGYTGEDGFEISVSEQEAVQLAELLLANPLLKPA 244 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT----KGCYIGQEVVSRIQ 195 + LR+ G+ D P L+ + K ++G EV+++ + Sbjct: 245 GLGARDSLRVEAGLCLHGQDMSPQISPAEATLLWTVRKTKDNPFPEKQKFLGSEVLAKQR 304 Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + +KR + + G +L + ++G + Sbjct: 305 KEGVSQKRVGFAVKNNGIIRQGCDVLDEQGNKVGHVSS 342 >gi|70733011|ref|YP_262784.1| sarcosine oxidase subunit alpha [Pseudomonas fluorescens Pf-5] gi|68347310|gb|AAY94916.1| sarcosine oxidase, alpha subunit [Pseudomonas fluorescens Pf-5] Length = 1005 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 731 MTTTTGGAARVLQWLEIY 748 >gi|312963485|ref|ZP_07777967.1| sarcosine oxidase, subunit alpha [Pseudomonas fluorescens WH6] gi|311282291|gb|EFQ60890.1| sarcosine oxidase, subunit alpha [Pseudomonas fluorescens WH6] Length = 1005 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 731 MTTTTGGAARVLQWLEIY 748 >gi|90419837|ref|ZP_01227746.1| glycine cleavage system T protein [Aurantimonas manganoxydans SI85-9A1] gi|90335878|gb|EAS49626.1| glycine cleavage system T protein [Aurantimonas manganoxydans SI85-9A1] Length = 380 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 82/264 (31%), Gaps = 55/264 (20%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ DV L R + G IL +I+ D L ++ + +D Sbjct: 71 ADAALALETLVPVDVAGLKEGRQRYAVFTNADGGILDDLMIANRG-DHLFLVVNAACKDQ 129 Query: 77 LIDKLLFYKLRSNVII--EIQPI-NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-- 131 I L R+ + E++P+ + +L+ + + ++ + + R Sbjct: 130 DIAHL-----RAGLEDTCEVEPLTDRALLALQGPAAEAALATLNPAVAEMRFMDLRALDL 184 Query: 132 ----------------GHNEKIASDIK-------------------TYHELRINHGIVDP 156 G+ I +D LR+ G+ Sbjct: 185 VGAACIVSRSGYTGEDGYEISIPADAAEKLAKALLALETVEPIGLGARDSLRLEAGLCLY 244 Query: 157 NTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D + +T P + ++ +G + G +++ + R+R ++ Sbjct: 245 GND-VDTTTTPVEGALEWSMQKVRKAGGDREGGFPGADIILKQLAEGATRRRVGLLPEGR 303 Query: 212 DLPPSGSPILT---DDIEIGTLGV 232 G+ + +GT+ Sbjct: 304 APVRGGTSLFAEAEGGAPVGTVTS 327 >gi|330816065|ref|YP_004359770.1| FAD dependent oxidoreductase [Burkholderia gladioli BSR3] gi|327368458|gb|AEA59814.1| FAD dependent oxidoreductase [Burkholderia gladioli BSR3] Length = 825 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 17/133 (12%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G+ A LQ++ AD+ + +AIL +G I+++ +D F+L Sbjct: 505 LLVKGRDAERALQSLAAADLT-VAPGTVLRAAILNARGGYESDPDIARLADDQFLLVTGV 563 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 ++ +D L + ++ ++GV + ++ FS+ Sbjct: 564 AQVTRDLDLLERH-------LDATGLHGVAVDVTGQYAL---------FSLLGPRSRALL 607 Query: 132 GHNEKIASDIKTY 144 K A D + Sbjct: 608 QSVSKAALDAAAF 620 >gi|307944642|ref|ZP_07659982.1| dimethylglycine dehydrogenase [Roseibium sp. TrichSKD4] gi|307772391|gb|EFO31612.1| dimethylglycine dehydrogenase [Roseibium sp. TrichSKD4] Length = 811 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++ G A FL ++T + + + +L P+GK++ F I+++ E+ F + Sbjct: 495 EITGPGAEAFLDLLMTNTMPKV--GRIILTPMLNPEGKLIGDFTIARVSEEHFYM 547 >gi|92113128|ref|YP_573056.1| sarcosine oxidase alpha subunit family protein [Chromohalobacter salexigens DSM 3043] gi|91796218|gb|ABE58357.1| sarcosine oxidase, alpha subunit family [Chromohalobacter salexigens DSM 3043] Length = 1019 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 84/270 (31%), Gaps = 55/270 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L R + G ++ S + E+ F+ Sbjct: 685 STLGKIDIQGPDAREFLGRIYTNKWQKLAPGRVRYGLMCGDDGMVMDDGTTSCLAENHFL 744 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + +++ L + KL +++ I++ Sbjct: 745 MTTTTGNAAPVLEWLELWHQTEWPELEVYFNSVTDHWATMTVTGPEARKLLTDLTDIDLD 804 Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVL--------------LHRTWGHNEK---IA 138 + W + H + + R S L + H +K Sbjct: 805 REAFKFMDWREGHVAGVPARVF-RISFTGELAFEINVQAHYAMHVWEALFAHGDKYNLTP 863 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197 +T H LR G + D ++ P D M I K ++G+ ++R R Sbjct: 864 YGTETMHVLRAEKGFIIVGQD-TDGSVTPEDLGMHW--AIGYDKPFPWVGKRALTRSDTR 920 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDI 225 RK+ + + D + G+P++ D Sbjct: 921 REGRKQLVGLKPKDASVVLEEGAPVVFDPK 950 >gi|295699473|ref|YP_003607366.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1002] gi|295438686|gb|ADG17855.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1002] Length = 1000 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 84/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ E ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWTKLEVGKCRYGLMLDENGMIFDDGVTVRLAEQHYM 725 Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEI-QPING 99 + ++ L + ++R V+ ++ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDLRVRLASVTDHWATFAVVGPQSRKVLRKVCDDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ +E T + ++ R S + L W + DI Sbjct: 786 ANAAFPFMTYREGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ PHD M G+ ++G+ +SR Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGM---GGLVAKSKDFLGKRSLSRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLSEDASFVIPEGSQIVAG 928 >gi|302539725|ref|ZP_07292067.1| sarcosine oxidase, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302457343|gb|EFL20436.1| sarcosine oxidase, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 964 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 86/290 (29%), Gaps = 65/290 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A FL I T L +AR + P G I + ++EE+ + + Sbjct: 632 IEVWGTDAGEFLGRIYTNGFKKLKPGMARYGVMCKPDGMIFDDGVTLRLEENRYFMTTTT 691 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQ----------------PINGVVLSWNQEHTFSNSSF 115 ++D L + +++ VV + S +F Sbjct: 692 GGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWTTIAVVGPQSREVVAGLAPDVDLSAEAF 751 Query: 116 -------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146 + R + N + + E Sbjct: 752 PFMAFRETTLASGVPARICRISFSGELAYEVNVPAWYGLAVWEEVYAIGRPYDITPYGTE 811 Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR G + D T+ P DA M +S KG ++G+ SR RK Sbjct: 812 TMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSW--AVSKVKG-FVGKRSYSRPDTSRTDRK 867 Query: 203 RPMIITGTDDL--PPSGSPILTDDIE----------IGTLGVVVGKKALA 240 + + + +D P G+ ++ D+ +G + AL Sbjct: 868 QLVGLLPSDGTTRLPEGAQLVAPDVPLTPETGPVPMLGHVTSSYHSPALG 917 >gi|91216429|ref|ZP_01253396.1| glycine cleavage system aminomethyltransferase T [Psychroflexus torquis ATCC 700755] gi|91185567|gb|EAS71943.1| glycine cleavage system aminomethyltransferase T [Psychroflexus torquis ATCC 700755] Length = 360 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 93/315 (29%), Gaps = 52/315 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ +Q I + D L A+ + + G I+ +I K + F+ Sbjct: 49 SHMGEFFIEGKEALQLIQKITSNDASILIDGQAQYTCMPNETGGIIDDLIIYKFHNEKFM 108 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114 + ++ S + + + + + ++ + + S Sbjct: 109 MVVNASNIEKDWKWVNQHNTFDAIPTNLSDEYSLLAIQGPKALEAMQSISPLDLSAIKFY 168 Query: 115 --FIDERFSIADVLLHRT--------------------WGHNEKIASD-------IKTYH 145 + E DV++ T W D + Sbjct: 169 HFAVGEFAGAQDVIISATGYTGSGGFEIYFKNKDAELIWTSVFAAGKDFGIKPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G+ D T P +A + + TK +I E + + RK Sbjct: 229 TLRLEMGMCLYGNDI-DDTTSPIEAKLGWI--TKFTKD-FINAEALKAEKENGPCRKLVA 284 Query: 206 IITGTDDLPPSGSPILTDDI-EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258 +P G I+ ++ +IG + + + + + + Sbjct: 285 FELQEKGIPRHGYAIVDEEGHDIGHVTSGTMSPSLKKAIGMGYVKTEHSKFGTSICIQIR 344 Query: 259 VHGVRVKASFPHWYK 273 ++ P +YK Sbjct: 345 KKTIKATIVKPPFYK 359 >gi|13475212|ref|NP_106776.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] gi|14025963|dbj|BAB52562.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] Length = 988 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+VCGK A FL + + L LP AR +L G I S++ +D F + Sbjct: 658 IEVCGKDAAEFLNRVYSNVFLKLPVGKARYGLMLREDGFIYDDGTTSRLADDRFFMTTTT 717 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 718 AYAAGVMTHLEF 729 >gi|293603717|ref|ZP_06686136.1| sarcosine oxidase [Achromobacter piechaudii ATCC 43553] gi|292817891|gb|EFF76953.1| sarcosine oxidase [Achromobacter piechaudii ATCC 43553] Length = 1003 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 81/270 (30%), Gaps = 58/270 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G + + ++ E ++ Sbjct: 665 STLGKIDIQGPDAATLLNWVYTNAWSKLEVGKGRYGLMLDENGMVFDDGVTMRLGEQHYL 724 Query: 67 LEIDRSKRDSLI----------------------DKLLFYK----LRSNVIIEIQP-ING 99 + ++ D + L V+ + P I+ Sbjct: 725 MSTTTGGAARVLAWMERWLQTEWPHLDVHLTTVTDHFATFAVAGPLARKVLRTVCPDIDF 784 Query: 100 VVLSWN----QEHTFSNSSFIDE----RFSIADV----------LLHRTWGHNEKIAS-- 139 ++ +E T + S + R S + L R W Sbjct: 785 SNHAFPFMSFREGTIAGSGWSSPTRIMRISFSGELSYEVNVPANLGQRVWNALMAAGQQY 844 Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +T H LR G + D ++ P D M ++ +K C +G+ +SR Sbjct: 845 GITPYGTETMHVLRAEKGYIIVGQD-TDGSMTPQDLGMG--GMVTKSKDC-LGKRSLSRA 900 Query: 195 QHRNIIRKRPMIITGTDDLP--PSGSPILT 222 RK+ + + D P GS I+ Sbjct: 901 HTAGPNRKQFVGLLARDPAVVLPEGSQIMH 930 >gi|330825112|ref|YP_004388415.1| glycine cleavage system T protein [Alicycliphilus denitrificans K601] gi|329310484|gb|AEB84899.1| glycine cleavage system T protein [Alicycliphilus denitrificans K601] Length = 387 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G +A L++++ DV+ LP R +L +G ++ + +DT Sbjct: 67 SHMGQLKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGVIDDLMFFNQGDDTLF 126 Query: 67 LEIDRSKRDSLIDKLL 82 L ++ + + I + Sbjct: 127 LIVNGACKAGDIAHIQ 142 >gi|315101059|gb|EFT73035.1| glycine cleavage system T protein [Propionibacterium acnes HL046PA1] Length = 371 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 43/106 (40%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 ++ + + ++ + + R +V + + +++ + Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVT 156 >gi|258652090|ref|YP_003201246.1| glycine cleavage system aminomethyltransferase T [Nakamurella multipartita DSM 44233] gi|258555315|gb|ACV78257.1| glycine cleavage system T protein [Nakamurella multipartita DSM 44233] Length = 368 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 23/61 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A F+ ++ D+ + A+ + T G +L + + D Sbjct: 55 SHLGKATVTGPGAAAFVNDCLSNDLNRIGPGQAQYTLCCTGDGGVLDDLIAYLVSPDEVF 114 Query: 67 L 67 L Sbjct: 115 L 115 >gi|255038295|ref|YP_003088916.1| glycine cleavage system aminomethyltransferase T [Dyadobacter fermentans DSM 18053] gi|254951051|gb|ACT95751.1| glycine cleavage system T protein [Dyadobacter fermentans DSM 18053] Length = 360 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ V G A+ +Q + D L + S + G ++ L+ +I ED + Sbjct: 49 SHMGEFSVKGPGALALIQKVSANDASALYDGKVQYSYLPNATGGVVDDLLVYRIAEDDYF 108 Query: 67 LEIDRSKRD 75 L ++ S + Sbjct: 109 LVVNASNIE 117 >gi|313813221|gb|EFS50935.1| glycine cleavage system T protein [Propionibacterium acnes HL025PA1] Length = 371 Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 43/106 (40%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 ++ + + ++ + + R +V + + +++ + Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVT 156 >gi|126733834|ref|ZP_01749581.1| FAD dependent oxidoreductase [Roseobacter sp. CCS2] gi|126716700|gb|EBA13564.1| FAD dependent oxidoreductase [Roseobacter sp. CCS2] Length = 817 Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 96/317 (30%), Gaps = 60/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S + G+ A FL+ +I + + + QG+IL + + ++D F Sbjct: 501 LPGFSRFNLEGEGAAEFLRGMIAGALPKI--GRMNLAYFPDSQGRILTEMSLIRHDDDHF 558 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI----------------------QPINGVVLS 103 L S + D L Y L + + + + L Sbjct: 559 TLITAASAQWHDYDILDKY-LPAGLTLTDITRDFSTLIVTGPKARDLFTAMGTDADLSLG 617 Query: 104 W--NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148 W +Q T + R A L +KI + + LR Sbjct: 618 WLTHQSATVAGQPCKLARVIFAGELGWEIHARMDKIPALYDAVLAAGATPFGMFALNALR 677 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 I G D + M+ I K + G+ + + R R ++ Sbjct: 678 IEKGYRAWKGDLSTDYTL-LEGGMERF--IKFDKPQDFPGKAALLGEKQRGRSR-GFAML 733 Query: 208 TGTDDLPPSG---SPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALT 258 T P SPI D ++G V AL + R D + + + + Sbjct: 734 TIDTPGPADAPYMSPIWVGDEKVGETTSGDWGFRVNKSIALGMLRTD--VNTLGSKVEVE 791 Query: 259 VHG----VRVKASFPHW 271 ++G V+ + P W Sbjct: 792 IYGERYVATVQENQPLW 808 >gi|308448078|ref|XP_003087608.1| hypothetical protein CRE_11637 [Caenorhabditis remanei] gi|308254356|gb|EFO98308.1| hypothetical protein CRE_11637 [Caenorhabditis remanei] Length = 407 Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 30/62 (48%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A FL ++ + T+ A+ S +L +G ++ ++ + E TF++ + Sbjct: 80 IEGPDAGAFLDGVLAGLISTMRVGKAKYSLLLNERGGVVDDLIVYRTAEHTFLIIANAGN 139 Query: 74 RD 75 RD Sbjct: 140 RD 141 >gi|116327162|ref|YP_796882.1| glycine cleavage system aminomethyltransferase T [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284992|sp|Q055P6|GCST_LEPBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|116119906|gb|ABJ77949.1| Aminomethyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 371 Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 7 SNQSFIKVCGKS--AIPFLQAIITAD-VLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I + G+ + FL+ ++T + V +L + +AIL G ++ I K + Sbjct: 52 SHMGEIFITGEPKIVLDFLE-LVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSAE 110 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 +++ + S +++ LL Y S V + Q N ++ Sbjct: 111 KYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWHQIALQGPKA 156 >gi|319763032|ref|YP_004126969.1| glycine cleavage system t protein [Alicycliphilus denitrificans BC] gi|317117593|gb|ADV00082.1| glycine cleavage system T protein [Alicycliphilus denitrificans BC] Length = 377 Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 36/76 (47%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G +A L++++ DV+ LP R +L +G I+ + +DT Sbjct: 57 SHMGQLKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGIIDDLMFFNQGDDTLF 116 Query: 67 LEIDRSKRDSLIDKLL 82 L ++ + + I + Sbjct: 117 LIVNGACKAGDIAHIQ 132 >gi|170724039|ref|YP_001751727.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida W619] gi|169762042|gb|ACA75358.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida W619] Length = 1005 Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 86/292 (29%), Gaps = 60/292 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I + L AR + G + + + + ++ F Sbjct: 670 STLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFY 729 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI--IEI 94 + ++ L Y KL S + I++ Sbjct: 730 MTTTTGGAARVLQWLELYHQTEWPEMKVYFTSVTDHWATLTLSGPNSRKLLSELTDDIDL 789 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY--- 144 ++W +E T R S L + G EK+ K Y Sbjct: 790 DKDAFPFMTW-KEGTVGGVPARVFRISFTGELSYEVNVQANYAMGVLEKVIEAGKKYNLT 848 Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 H LR G + D ++ P D M G + +IG ++R Sbjct: 849 PYGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMSWCVGRN-KPFSWIGLRGMNREDCV 906 Query: 198 NIIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241 RK+ + + D P G+ ++ D + +G + +L Sbjct: 907 RENRKQLVGLKPVDPTKWLPEGAQLVFDPKQPIPMDMVGHVTSSYAANSLGY 958 >gi|289640859|ref|ZP_06473030.1| glycine cleavage system T protein [Frankia symbiont of Datisca glomerata] gi|289509435|gb|EFD30363.1| glycine cleavage system T protein [Frankia symbiont of Datisca glomerata] Length = 444 Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTF 65 S+ +V G A + + +T D+ + A+ + P G ++ + Sbjct: 97 SHLGKARVRGPGAADLVDSALTNDLSRIGPGQAQYTLCCDPETGGVVDDLIAYLYSASEV 156 Query: 66 ILEIDRSKRDSLIDKL 81 L + + ++ +L Sbjct: 157 FLIPNAANTAEVVRRL 172 >gi|314918530|gb|EFS82361.1| glycine cleavage system T protein [Propionibacterium acnes HL050PA1] Length = 371 Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 32/317 (10%), Positives = 95/317 (29%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I++ G + L + + + A+ S +LT +G ++ + S + + + Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTSHLPDGDY 110 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109 ++ + + ++ + + R +V + + +++ Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170 Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137 + R + + E Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196 + LR+ G+ + I P A + + ++ K G ++G+ + Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251 + + + G +G ++ + +G + + +A+A +D Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345 Query: 252 KKGMALTVHGVRVKASF 268 +++ V G + + Sbjct: 346 GTSLSVDVRGKALNTTV 362 >gi|149236221|ref|XP_001523988.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146452364|gb|EDK46620.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 397 Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G + FLQ + D+ L + S +L G ++ +I+K E+ + + + Sbjct: 76 ISGSESKLFLQKVTPIDLDLLAINSSSLSVLLNKDGGVIDDCIITKHGENAYYMVTNAGC 135 Query: 74 RDSLIDKLLF 83 R +D L Sbjct: 136 RAKDVDFLKK 145 >gi|90417509|ref|ZP_01225431.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2207] gi|90330662|gb|EAS45946.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2207] Length = 373 Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 105/310 (33%), Gaps = 51/310 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I + G+ A L+ ++ D+ +L + + QG ++ ++++ E+TF Sbjct: 56 SHMGQIIIEGEGAAQALEKLMPVDLESLGINQQTYATLTNEQGGVMDDLIVTRWAENTFF 115 Query: 67 LEIDRSKR----DSLIDKLLFYKLR---------------SNVIIEIQPINGVVLSWNQE 107 L ++ + + + L + +R ++ E+ P ++ N Sbjct: 116 LIVNAGCKMQDLEHIRSHLPDFDIRYLGEQGLLALQGLHAREIMAELSPEANKLVFMNGC 175 Query: 108 HT--------FSNSSFIDER-FSIADVLLHRTWGHNEKIASDIKTY------HELRINHG 152 H+ + S + E F I+ ++ ++ ++ + LR+ G Sbjct: 176 HSTIDGIDCYITRSGYTGEDGFEISVDPSDALRLADKLLSYELVNWIGLGARDSLRLEAG 235 Query: 153 IVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP- 204 + D T P +A + ++G G ++G +V+ + +KR Sbjct: 236 LCLYGHDM-NETTSPVEAGIIWSISKSRRVDGA--KAGGFLGADVILGQIANGVSKKRVG 292 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258 ++ G + + +G + A+ I+ + + Sbjct: 293 FLVDGRAPVREGAEIVDQAGNVVGAITSGGFGPTLQAPVAMGYVSIEFAALGTQLNALVR 352 Query: 259 VHGVRVKASF 268 + + S Sbjct: 353 GRSLPITVSK 362 >gi|89069346|ref|ZP_01156705.1| predicted aminomethyltransferase, tetrahydrofolate dependent [Oceanicola granulosus HTCC2516] gi|89045113|gb|EAR51184.1| predicted aminomethyltransferase, tetrahydrofolate dependent [Oceanicola granulosus HTCC2516] Length = 372 Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 79/284 (27%), Gaps = 47/284 (16%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL------F 83 DV L R G +L +++ D L ++ +++ + L Sbjct: 79 DVAGLAEGRQRYGLFTDDSGGLLDDLMLANRG-DHLFLVVNAARKAHDLAHLRTLQGVEV 137 Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------------------------- 117 +++ ++ +Q + + ++ F+D Sbjct: 138 HEITDRALLALQGPAAEAVLADLAPEAADMRFMDVATLTLEGAECWVSRSGYTGEDGYEI 197 Query: 118 -ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 A+ L R H + + LR+ G+ D ST AL + Sbjct: 198 SVPADRAEALARRLLAHGDVAPIGLGARDSLRLEAGLCLYGHDIDESTTPAEAALGWAIQ 257 Query: 177 GI----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT---DDIEIGT 229 + G + G E + R R+R + G P+ DD +G Sbjct: 258 KVRRRDGARAGGFPGAETILRELADGPARRRVGLRPEGRAPMREGVPLYAGADDDTPVGR 317 Query: 230 LGV------VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + V G A+ + L + + + Sbjct: 318 ITSGGFGPTVGGPVAMGYVPAELAAPGTVVHGELRGKRLPLTVT 361 >gi|328871677|gb|EGG20047.1| aminomethyltransferase [Dictyostelium fasciculatum] Length = 433 Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 57/276 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G+ I F+++I AD+ ++ S T G I+ +I+K D+ Sbjct: 112 SHMGQLRLHGRDRIEFMESISVADLQAAQENKSKLSVFTTENGGIIDDTMITKKA-DSLY 170 Query: 67 LEIDRSKRDSLIDKL--LFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 + ++ D I + + R+ +V +E+ + +V E S + S Sbjct: 171 VVVNAGCADKDIAHMNNKIAEFRASGKDVAMELMGDSALVAVQGPETERIVSQVLGRDLS 230 Query: 122 IADVLLH------------------------------------RTWGHNEK----IASDI 141 + + R E + + Sbjct: 231 KMEFMTQMDMTLDGIDLIVTRCGYTGEDGFEISVPNKHAEQFTRMLLDAESGVVVKPAGL 290 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQH 196 LR+ G+ D TI P +A + L +TK G + G ++ + Sbjct: 291 GARDSLRLEAGLCLYGHDM-DETITPIEASLAWL----ITKRRREQGGFPGASIIQQQLK 345 Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 + +KR +++G + + D IG + Sbjct: 346 EGVSKKRVGLLSGI-PVREGAVIVDNDGKAIGKITS 380 >gi|102139787|gb|ABF69972.1| aminomethyltransferase, mitochondrial (glycine cleavage system T protein), putative [Musa acuminata] Length = 424 Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G+ PFL+ ++ ADV L + +G + +++K+ +D L ++ Sbjct: 94 LSLRGRDCAPFLETLVIADVAGLRPGTGTLTVFTNERGGAIDDSVVTKVGDDHIYLVVNA 153 Query: 72 SKRDSLIDKL 81 RD + + Sbjct: 154 GCRDKDLAHI 163 >gi|126664297|ref|ZP_01735287.1| glycine cleavage system aminomethyltransferase T [Flavobacteria bacterium BAL38] gi|126623690|gb|EAZ94388.1| glycine cleavage system aminomethyltransferase T [Flavobacteria bacterium BAL38] Length = 360 Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 46/278 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G++A+ +Q + + D L A+ S + G I+ ++ KI ++ ++ Sbjct: 49 SHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNDGGIVDDLIVYKIADNHYM 108 Query: 67 LEIDRSKRDS----LIDKLLF----------YKLRS----NVIIEIQPINGVVLSWNQEH 108 L ++ S + + Y L + +Q + + L+ + Sbjct: 109 LVVNASNIEKDWNWISSHNDLGVDMQNLSEGYSLLAIQGPKAAAAMQSLTSINLTNMGYY 168 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---Y--------------------H 145 TF F + I + G E + + Sbjct: 169 TFQIGEFAGKSDVIVSATGYTGSGGFEIYFKNEDAEYIWNKVFEAGAAFGIKPIGLAARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + K + E + + + + RK Sbjct: 229 TLRLEMGFCLYGNDI-NDTTSPLEAGLGWI--TKFDKE-FTNSENLKKQKEAGVARKLVG 284 Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAIA 242 +P I + +G + ++ IA Sbjct: 285 FEMVERGIPRHDYEIADANGNIVGIVTSGTQSPSMGIA 322 >gi|161523323|ref|YP_001578335.1| glycine cleavage system aminomethyltransferase T [Burkholderia multivorans ATCC 17616] gi|189351904|ref|YP_001947532.1| glycine cleavage system aminomethyltransferase T [Burkholderia multivorans ATCC 17616] gi|238687009|sp|A9ACU5|GCST_BURM1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|160340752|gb|ABX13838.1| glycine cleavage system T protein [Burkholderia multivorans ATCC 17616] gi|189335926|dbj|BAG44996.1| aminomethyltransferase [Burkholderia multivorans ATCC 17616] Length = 372 Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G A F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRARAFFEYAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|163735502|ref|ZP_02142935.1| dimethylglycine dehydrogenase, putative [Roseobacter litoralis Och 149] gi|161391315|gb|EDQ15651.1| dimethylglycine dehydrogenase, putative [Roseobacter litoralis Och 149] Length = 811 Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 10/133 (7%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +R+ G + D L P + +D + KG +IGQE + + RK Sbjct: 671 DSMRMEKGFMHWKADLLTE-FDPFETALDRF--VKPEKGPFIGQEALQKRMAHGPTRKLV 727 Query: 205 MIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMAL 257 + G+ P G+ ++ D +GT+ VG A A D + + L Sbjct: 728 TLKIGSTTTPAHGGASLMQGDTVVGTITSGDWGYRVGLNLAYAFVMPDMAEIGRVMQLDL 787 Query: 258 TVHGVRVKASFPH 270 V + P Sbjct: 788 CGELVAAEVITPS 800 >gi|157125617|ref|XP_001660716.1| aminomethyltransferase [Aedes aegypti] gi|108873536|gb|EAT37761.1| aminomethyltransferase [Aedes aegypti] Length = 412 Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK I ++I TAD+ L + +G IL ++S++ EDT + + S+ Sbjct: 90 LRGKDVISCFESICTADIKGLRNGTGTLTVFTNGKGGILDDLIVSRVSEDTLYVVSNASR 149 Query: 74 RDS 76 +D+ Sbjct: 150 KDT 152 >gi|150024926|ref|YP_001295752.1| glycine cleavage system aminomethyltransferase T [Flavobacterium psychrophilum JIP02/86] gi|166221549|sp|A6GXW3|GCST_FLAPJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|149771467|emb|CAL42936.1| Aminomethyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 360 Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 35/69 (50%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G++A+ +Q + + D L A+ S + +G I+ +I KI ++ ++ Sbjct: 49 SHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNEGGIVDDLIIYKIADNHYM 108 Query: 67 LEIDRSKRD 75 L ++ S + Sbjct: 109 LVVNASNIE 117 >gi|125591691|gb|EAZ32041.1| hypothetical protein OsJ_16220 [Oryza sativa Japonica Group] Length = 357 Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 56/281 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+ Sbjct: 29 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 88 Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81 + L ++ RD + + Sbjct: 89 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 148 Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133 Y S+ I+I + + E F S + +A LL ++ G Sbjct: 149 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 206 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192 + LR+ G+ D I P +A + G +G ++G +V+ Sbjct: 207 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 263 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + +R +++ P S S I+++ IG + Sbjct: 264 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTS 303 >gi|126739037|ref|ZP_01754731.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. SK209-2-6] gi|126719654|gb|EBA16362.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. SK209-2-6] Length = 1010 Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 V G A FL + T + TL R + T G ++ ++++I+EDT++ Sbjct: 679 VKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCTENGFLMDDGVVARIDEDTWL 731 >gi|289672400|ref|ZP_06493290.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. syringae FF5] Length = 115 Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 16 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 75 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 76 MTTTTGGAARVLQWLEIY 93 >gi|257483027|ref|ZP_05637068.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 678 Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ F+ Sbjct: 466 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 525 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 526 MTTTTGGAARVLQWLEIY 543 >gi|302879997|ref|YP_003848561.1| glycine cleavage system T protein [Gallionella capsiferriformans ES-2] gi|302582786|gb|ADL56797.1| glycine cleavage system T protein [Gallionella capsiferriformans ES-2] Length = 362 Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + V G + FL ++ + + A SA+L P G ++ +I + ED F Sbjct: 52 HMRVVDVKGANVRSFLCYLLANNANKITLPGKALYSAMLRPDGGVIDDLIIYFMTEDWFR 111 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ D I + Sbjct: 112 IVVNAGTADKDIAWMK 127 >gi|150398477|ref|YP_001328944.1| sarcosine oxidase subunit alpha family protein [Sinorhizobium medicae WSM419] gi|150029992|gb|ABR62109.1| sarcosine oxidase, alpha subunit family [Sinorhizobium medicae WSM419] Length = 987 Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I++ G A FL + L LP AR +L G I S++ E+ F + Sbjct: 657 IELSGSDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLAENRFFMTTTT 716 Query: 72 SKRDSLIDKLLF 83 + +++ L F Sbjct: 717 AYAAGVMNHLEF 728 >gi|297172049|gb|ADI23032.1| glycine cleavage system T protein (aminomethyltransferase) [uncultured Planctomycetales bacterium HF0770_03I01] Length = 382 Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 61/309 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F I T D+ + + I G I+ ++S+++++ F L I Sbjct: 70 VQIKGPDAFKFTNYITTKDLNKCKVNQCKYTLICDGSGGIINDPVLSRLDDNLFWLSISD 129 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------------E 107 S ++ S +E+ + + E Sbjct: 130 S---DVLLWAKGLAHNSKWNVELSEPDVAPMQVQGPKSKPLMISIFGPKVESLRYYHSME 186 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------RI 149 T S + + R + + + N K IK ++ + R+ Sbjct: 187 TTLSGMNMLVTRTGYTGEIGYEIYLKNAK-KDGIKLWNTMLEAGKLYNISPGGPSLIRRL 245 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 HGI + D P++ + + L + +IG++ + +I+ + + +K I Sbjct: 246 EHGIRNYGQDMRLEN-NPYEVGLGF--AVDLDQEADFIGKKALIQIKKQELKQKIAGIEF 302 Query: 209 GTDDLPPSGS---PILTDDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMALTV 259 GT+ + P++ + + G + L A+ I+K + K + + Sbjct: 303 GTERMKGWNEDFWPVMENGKQTGWVSTAAYSPGLKKNIGYAMLPIEKTEIGTK--IIILA 360 Query: 260 HGVRVKASF 268 GV+ +A+ Sbjct: 361 RGVKTEATV 369 >gi|319779906|ref|YP_004139382.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165794|gb|ADV09332.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 817 Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 54/278 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68 ++ G A+ L + DV P + +L +G I ++++ E+ F + Sbjct: 496 ELSGPDALKALDWVCANDVSK-PVGRLTYTQLLNTRGGIEADLTVARLAEEKFYIVTGTG 554 Query: 69 ----------------IDRSKRD--SLIDKLLFYKLRS-NVIIEIQPINGVVLSWN---- 105 +D D L R+ +V+ + + +S+ Sbjct: 555 FRTHDSSWIGDHIGEGLDARLVDVTEDFGTLSLMGPRARDVLSAVTEADVSNVSFPFGHV 614 Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELR 148 +E + + R + L + LR Sbjct: 615 REIAIAGHTIRALRVTYVGELGWELHVPIAATGEVFDALMAAGKKHDIRPIGYRALESLR 674 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207 + G +D P+ P +A + + L K +IG+ + + ++KR Sbjct: 675 LEKGYRAWGSDITPNDT-PQEAGLGW--AVKLRKNTDFIGRRALEKTSGT-AMKKRFAGF 730 Query: 208 TGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 T D + IL + +G L G + + Sbjct: 731 TVDDPEIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 766 >gi|296137002|ref|YP_003644244.1| glycine cleavage system T protein [Thiomonas intermedia K12] gi|295797124|gb|ADG31914.1| glycine cleavage system T protein [Thiomonas intermedia K12] Length = 386 Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 60/294 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61 S+ + + G A L+ ++ D+ LP R + QG +L ++ + Sbjct: 58 SHMGQVALRGDDAAAALETLVPMDIHGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGA 117 Query: 62 EDTFILEI-------DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 L + D + +L D+ + ++ +Q V ++ Sbjct: 118 GQELFLIVNAACKVQDVALLQTLSDRCEVVPMPEQALLALQGPQAVQTFARLVPEAADLV 177 Query: 115 FIDERF-------------------------------SIADVLLHRTWGHNEKIASDIKT 143 F+ R+ + A L E + Sbjct: 178 FMTGRWMDVSTEGGAIRIFATRSGYTGEDGLEISVAAADAQRLARLLLSLPEVEPIGLGA 237 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVV-SRIQH 196 LR+ G+ D ST P +A + +G G + G EV+ ++I Sbjct: 238 RDTLRLEAGLCLYGHDIDTSTT-PVEAGLTWAIQKVRRHG-GARAGGFPGAEVILAQIDQ 295 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV------GKKALAIA 242 N+ +R + + G D P G+ +L D G + G A+A Sbjct: 296 PNLAPRRRIGLIGLDRTPVREGTELLAADGRSAGRVSSGSFAPSAGGPVAMAYV 349 >gi|304569707|ref|YP_010902.2| glycine cleavage system T protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233907|gb|ADP86761.1| glycine cleavage system T protein [Desulfovibrio vulgaris RCH1] Length = 376 Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L +T ++ TL R +L G +L ++ + ED ++L ++ + Sbjct: 73 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 132 Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109 S L +L +++ E I + G++ +E T Sbjct: 133 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 191 Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 F ++ + R + A+ L R + + + + LR+ G+ Sbjct: 192 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 251 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208 D T P +A + + + + + + R R P+ I Sbjct: 252 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 296 Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + L D +G + G A+A + V + + + RV+ Sbjct: 297 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKKPHAEEDSFIIKAARVEL 355 Query: 267 S 267 Sbjct: 356 E 356 >gi|329113560|ref|ZP_08242340.1| Aminomethyltransferase [Acetobacter pomorum DM001] gi|326697082|gb|EGE48743.1| Aminomethyltransferase [Acetobacter pomorum DM001] Length = 389 Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85 ++ AD+ L + R + +G IL +++++ ED +L ++ + +++ ++ L Sbjct: 90 LVPADIAALKHGRQRYTQFTNAEGGILDDLMVARL-EDGLLLVVNAACKEADLELLQ-SA 147 Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 L + ++E Q ++ E ++F ++ Sbjct: 148 LVAECVVEPQEDRALLALQGPEAEQVLAAFAED 180 >gi|312131227|ref|YP_003998567.1| glycine cleavage system t protein [Leadbetterella byssophila DSM 17132] gi|311907773|gb|ADQ18214.1| glycine cleavage system T protein [Leadbetterella byssophila DSM 17132] Length = 362 Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 89/287 (31%), Gaps = 50/287 (17%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + GK A+ +Q + + D TL + S + G ++ L+ ++ E+ ++ Sbjct: 49 SHMGEFLLKGKGALDLIQKVTSNDASTLFDGKIQYSYLPNETGGVVDDLLVYRVSEEEYL 108 Query: 67 LEIDRSKRDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEH 108 L ++ D + Y L + N + +Q + + LS + Sbjct: 109 LVVNAGNIKKDWDWISKYNTEGVEMTDLSPETSLFAVQGPNAVKTLQKLTDIDLSTISYY 168 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTY--------------------H 145 TF F + + G E A + + Sbjct: 169 TFVKGKFAGHEDILISATGYTGAGGFEIYLPNAIAEEVWKKIFEAGAEFDIKPIGLGARD 228 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 LR+ G D T P +A + + TK + + + + RK Sbjct: 229 TLRLEMGYCLYGNDITDETS-PLEAGLGWV--TKFTKE-FTNSAALKAEKEAGLKRKLVA 284 Query: 206 IITGTDDLPPSGSPI-LTDDIEIGTLGVV----VGKKALAIARIDKV 247 I +P S I D +IG + K +A+ + Sbjct: 285 IEIIDKGIPRSHYEICTADGEKIGEVTSGTMSPSLNKGIALGYVSAA 331 >gi|71736897|ref|YP_272539.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557450|gb|AAZ36661.1| glycine cleavage system T protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322212|gb|EFW78308.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. glycinea str. B076] gi|320331872|gb|EFW87810.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. glycinea str. race 4] gi|330873050|gb|EGH07199.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. glycinea str. race 4] gi|330986836|gb|EGH84939.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. lachrymans str. M301315] Length = 360 Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|167041920|gb|ABZ06659.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_133I24] Length = 998 Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ I + G FL I T + LP AR +L G + ++I E+ Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 721 Query: 64 TFILEIDRSKRDSLIDKLLFY 84 F + ++ +++ L +Y Sbjct: 722 HFHMTTTTAQAVNVLAHLEYY 742 >gi|222054356|ref|YP_002536718.1| glycine cleavage system T protein [Geobacter sp. FRC-32] gi|221563645|gb|ACM19617.1| glycine cleavage system T protein [Geobacter sp. FRC-32] Length = 363 Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 87/241 (36%), Gaps = 41/241 (17%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKLLFYKL 86 V ++P +R +L G I+ ++ ++ E+ ++ ++ + D+ + +L Sbjct: 76 VKSIPVGRSRYGFLLNENGGIIDDLIVFRLGEEEAMVVVNAATIDNDFAVIQSRLKQGTS 135 Query: 87 RSNV-----IIEIQ-PINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-- 135 +N+ +++Q P++ +L+ + F+ R D ++ RT E Sbjct: 136 FTNISAATGKLDLQGPLSRQLLAEKFGPELAAIPYFKFVKTRLLGVDAIVSRTGYTGELG 195 Query: 136 -----KIASDIKTYHE-----------------LRINHGIVDPNTDFLPSTIFPHDALMD 173 + + LR+ G +D + P +A + Sbjct: 196 YEIFLPAEKVAELWDLLLADQRVKPAGLGARDVLRLEVGYSLYGSDI-DESTTPLEAGLG 254 Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233 ++L K +IG+E + + Q + R + + P I + +GT+ Sbjct: 255 AF--VNLDKE-FIGREALRKQQQTGLPRVKAAFQVQSRRSPRHHYEICFEGETVGTVTSG 311 Query: 234 V 234 V Sbjct: 312 V 312 >gi|289624824|ref|ZP_06457778.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647725|ref|ZP_06479068.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. aesculi str. 2250] gi|330866559|gb|EGH01268.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 360 Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|85715196|ref|ZP_01046180.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A] gi|85698111|gb|EAQ35984.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A] Length = 387 Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 73/264 (27%), Gaps = 48/264 (18%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A L+ ++ D++ + R + G IL ++ + D L ++ + + + Sbjct: 76 DAALALERLVPQDIVAVAPGRQRYAQFTNAAGGILDDLMVVNLG-DHLFLVVNGACKAAD 134 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----FIDERFSIADVLLHRTWGH 133 L + L IE+ +V + + RF A + R G Sbjct: 135 EAHLREH-LSDACTIEVLADRALVALQGPKAASVLAKICPEAPAMRFMDASARIMRVAGD 193 Query: 134 NEKIASDIKTY------------------------------------HELRINHGIVDPN 157 Y LR+ G+ Sbjct: 194 AVDCLVSRSGYTGEDGYEISIPGAHAENVVSALLDDPDVMPVGLGARDSLRLEAGLCLYG 253 Query: 158 TDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 D +T P +A ++ G + G +V+ + R+R + Sbjct: 254 HDI-DATTTPIEAALEWSVQKSRRSGGARAGGFPGADVILSQFEQGAARRRVGMKPEGRA 312 Query: 213 LPPSGSPILTDDIEIGTLGVVVGK 236 G+ + D + +G V Sbjct: 313 PVREGALLFADAGSVDPIGTVTSG 336 >gi|298484852|ref|ZP_07002952.1| Aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160706|gb|EFI01727.1| Aminomethyltransferase (glycine cleavage system T protein) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 360 Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E + Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|84502755|ref|ZP_01000874.1| sarcosine oxidase, alpha subunit family protein [Oceanicola batsensis HTCC2597] gi|84389150|gb|EAQ01948.1| sarcosine oxidase, alpha subunit family protein [Oceanicola batsensis HTCC2597] Length = 971 Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 7/124 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + + + TL R +L G I+ ++I D Sbjct: 636 CDVSTLGKIDVQGPDAAAFLDFVYSNTMSTLKQGKVRYGLMLREDGHIMDDGTCARIGPD 695 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122 +++ + ++ + F + V ++P V ++S ++ + + + R + Sbjct: 696 HYLVSTTTAAAGEVMRHMEF---AAQV---LRPELDVHLVSVTEQWAQTAIAGPESRDLL 749 Query: 123 ADVL 126 +VL Sbjct: 750 NEVL 753 >gi|315498576|ref|YP_004087380.1| glycine cleavage system t protein [Asticcacaulis excentricus CB 48] gi|315416588|gb|ADU13229.1| glycine cleavage system T protein [Asticcacaulis excentricus CB 48] Length = 370 Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A+ L+A+ D L + S +L G IL +++S+ + D F Sbjct: 54 SHMGQARLSGMDAVYTLEALTPTDFAALKPGKQKYSLLLNEAGGILDDWMVSRPQTDGFF 113 Query: 67 LEIDRSKRD 75 L ++ + +D Sbjct: 114 LVVNAACKD 122 >gi|114706135|ref|ZP_01439038.1| aminomethyltransferase [Fulvimarina pelagi HTCC2506] gi|114538981|gb|EAU42102.1| aminomethyltransferase [Fulvimarina pelagi HTCC2506] Length = 373 Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 I V GK + L A++T+D+ + + S I+ G ++ L+ + ED F L Sbjct: 56 LRMINVSGKDSEAVLNAMLTSDIAKMKPGQSAISNIVDENGSLIDDVLVYRDGEDVFRL 114 >gi|186470763|ref|YP_001862081.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] gi|184197072|gb|ACC75035.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] Length = 376 Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 91/301 (30%), Gaps = 67/301 (22%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A L T D+ L + +AIL +GK + ++ + + F++ Sbjct: 63 GPHAESLLDWATTRDIGKLYPGKSAYAAILNEEGKFIDDCIVYRTGPNAFMVVHGAGTGY 122 Query: 76 SLIDKLLFYKLRSNVII------------EIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +L+ V + Q ++ + + R Sbjct: 123 E---RLVRSAQGRQVAVLFDDDLHDLSLQGPQAVDFLAEHVPGIRDLPYFHHVQTRLFGR 179 Query: 124 DVLLHRTWGHNEK---------------------------IASDIKTYHELRINHGI--- 153 V++ RT E+ + LR+ + Sbjct: 180 PVMISRTGYTGERGYEIFCKAADAPLIWDTILAEGAAFGIVPCAFLALDWLRVESYLLFY 239 Query: 154 ------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR--NIIRKRPM 205 + P D + +D +S K + G +R R R R Sbjct: 240 PYDNSEMYPFADEKAGDTLW-ELGLDFT--VSPGKTEFCG----AREHFRLAGKERFRIY 292 Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVH 260 + +G + D ++G + + ++LAIAR++ V HA + G+AL V Sbjct: 293 GVDIAASKAASAGDTLWRDGEQVGVVTCGMYSRLTNRSLAIARMN-VAHA-RNGVALEVK 350 Query: 261 G 261 G Sbjct: 351 G 351 >gi|115359290|ref|YP_776428.1| sarcosine oxidase alpha subunit family protein [Burkholderia ambifaria AMMD] gi|115284578|gb|ABI90094.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria AMMD] Length = 1003 Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNDAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D ++ P+D M L ++ +K C +G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGMGGL--VAKSKDC-LGKRSLSRSDTS 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935 >gi|226193245|ref|ZP_03788855.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] gi|225934845|gb|EEH30822.1| glycine cleavage system T protein [Burkholderia pseudomallei Pakistan 9] Length = 353 Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 33 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 92 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 93 RVVVNAGTAE 102 >gi|289610116|emb|CBI60319.1| unnamed protein product [Sordaria macrospora] Length = 295 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60 S+ + + G A L+A++ D+ L R S +L QG IL +++++ Sbjct: 75 SHMGQLLIHGPDATAALEALLPGDLKILKPAKMRYSLLLDDQGGILDDLMVTRLGSEQPF 134 Query: 61 ----EEDTFILEIDRSKRDSLIDKLL 82 +D F + ++ + + I L Sbjct: 135 GEVEGDDAFYMVVNGATKYDDIGHLR 160 >gi|134281505|ref|ZP_01768213.1| glycine cleavage system T protein [Burkholderia pseudomallei 305] gi|254194593|ref|ZP_04901024.1| glycine cleavage system T protein [Burkholderia pseudomallei S13] gi|134247172|gb|EBA47258.1| glycine cleavage system T protein [Burkholderia pseudomallei 305] gi|169651343|gb|EDS84036.1| glycine cleavage system T protein [Burkholderia pseudomallei S13] Length = 391 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 71 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 130 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 131 RVVVNAGTAE 140 >gi|53720969|ref|YP_109955.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei K96243] gi|53726142|ref|YP_104498.1| glycine cleavage system aminomethyltransferase T [Burkholderia mallei ATCC 23344] gi|124385115|ref|YP_001027523.1| glycine cleavage system aminomethyltransferase T [Burkholderia mallei NCTC 10229] gi|126441730|ref|YP_001060919.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 668] gi|126449179|ref|YP_001082581.1| glycine cleavage system aminomethyltransferase T [Burkholderia mallei NCTC 10247] gi|126451834|ref|YP_001068216.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 1106a] gi|167740740|ref|ZP_02413514.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 14] gi|167817958|ref|ZP_02449638.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 91] gi|167826318|ref|ZP_02457789.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 9] gi|167847832|ref|ZP_02473340.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei B7210] gi|167896396|ref|ZP_02483798.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 7894] gi|167904802|ref|ZP_02492007.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei NCTC 13177] gi|167913077|ref|ZP_02500168.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 112] gi|167921015|ref|ZP_02508106.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei BCC215] gi|228969295|ref|YP_331543.2| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei 1710b] gi|229008327|ref|YP_994588.2| glycine cleavage system aminomethyltransferase T [Burkholderia mallei SAVP1] gi|254175233|ref|ZP_04881894.1| glycine cleavage system T protein [Burkholderia mallei ATCC 10399] gi|254183983|ref|ZP_04890574.1| glycine cleavage system T protein [Burkholderia pseudomallei 1655] gi|254186449|ref|ZP_04892966.1| glycine cleavage system T protein [Burkholderia pseudomallei Pasteur 52237] gi|254260189|ref|ZP_04951243.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710a] gi|254298745|ref|ZP_04966196.1| glycine cleavage system T protein [Burkholderia pseudomallei 406e] gi|254357467|ref|ZP_04973741.1| glycine cleavage system T protein [Burkholderia mallei 2002721280] gi|59797676|sp|Q62FM9|GCST_BURMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|59797689|sp|Q63PL4|GCST_BURPS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221539|sp|A3MQP5|GCST_BURM7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221540|sp|A2S6F4|GCST_BURM9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221541|sp|A3P0U5|GCST_BURP0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|166221542|sp|A3NEZ8|GCST_BURP6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|52211383|emb|CAH37373.1| aminomethyltransferase [Burkholderia pseudomallei K96243] gi|52429565|gb|AAU50158.1| glycine cleavage system T protein [Burkholderia mallei ATCC 23344] gi|124293135|gb|ABN02404.1| aminomethyltransferase [Burkholderia mallei NCTC 10229] gi|126221223|gb|ABN84729.1| aminomethyltransferase [Burkholderia pseudomallei 668] gi|126225476|gb|ABN89016.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106a] gi|126242049|gb|ABO05142.1| aminomethyltransferase [Burkholderia mallei NCTC 10247] gi|148026531|gb|EDK84616.1| glycine cleavage system T protein [Burkholderia mallei 2002721280] gi|157808499|gb|EDO85669.1| glycine cleavage system T protein [Burkholderia pseudomallei 406e] gi|157934134|gb|EDO89804.1| glycine cleavage system T protein [Burkholderia pseudomallei Pasteur 52237] gi|160696278|gb|EDP86248.1| glycine cleavage system T protein [Burkholderia mallei ATCC 10399] gi|184214515|gb|EDU11558.1| glycine cleavage system T protein [Burkholderia pseudomallei 1655] gi|254218878|gb|EET08262.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710a] Length = 372 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|115401072|ref|XP_001216124.1| hypothetical protein ATEG_07503 [Aspergillus terreus NIH2624] gi|114190065|gb|EAU31765.1| hypothetical protein ATEG_07503 [Aspergillus terreus NIH2624] Length = 869 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 82/273 (30%), Gaps = 59/273 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ LQ + DV T + +L G IL ++++ E+ + +I + Sbjct: 535 VSGPGAVHLLQRLTARDVAT-KPGTVTYTLLLDDHGYILGDIFVTRLGENEY--QIGANS 591 Query: 74 RDSLIDKLLFYK-------------LR--------------------SNVIIEIQPINGV 100 L+ L + +R N+ + G+ Sbjct: 592 ATDLV-YLTRHARHHRETRPSEWVEVRDITGGTCCLGLWGPRAGDVLRNICSDDLSDTGL 650 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143 ++ S I R S E I + Sbjct: 651 PYFNAKQTILSGIPVIMLRKSYVGEFGWEIQTTAEYGQRLWDVVLQAGKLHGLIPAGRSA 710 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202 ++ LR+ G D P +A + L+ + L K G ++G+ + R N RK Sbjct: 711 FNSLRLEKGYRTFGIDMTTEHD-PLEAGL--LSAVDLDKNGDFLGKAALRRRVLDNPARK 767 Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R +++ + P+ D G + Sbjct: 768 LRCLVVNDGRSVVMGKEPVFYDKKPSGYVTAAA 800 >gi|46449510|gb|AAS96161.1| glycine cleavage system T protein [Desulfovibrio vulgaris str. Hildenborough] Length = 362 Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L +T ++ TL R +L G +L ++ + ED ++L ++ + Sbjct: 59 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 118 Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109 S L +L +++ E I + G++ +E T Sbjct: 119 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 177 Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 F ++ + R + A+ L R + + + + LR+ G+ Sbjct: 178 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 237 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208 D T P +A + + + + + + R R P+ I Sbjct: 238 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 282 Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + L D +G + G A+A + V + + + RV+ Sbjct: 283 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKKPHAEEDSFIIKAARVEL 341 Query: 267 S 267 Sbjct: 342 E 342 >gi|167721762|ref|ZP_02404998.1| glycine cleavage system aminomethyltransferase T [Burkholderia pseudomallei DM98] Length = 372 Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|296392279|ref|ZP_06881754.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAb1] Length = 1006 Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 88/289 (30%), Gaps = 57/289 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95 + +++ L Y KL + V I++ Sbjct: 731 MTTTTGGAARVLEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLD 790 Query: 96 PINGVVLSWNQEHTFS------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144 ++W + SF E +V G E +A Y Sbjct: 791 KDAFPFMTWKEGKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPY 850 Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 H LR G + D +++ P D M G S +IG ++R Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDASVTPDDLNMGWAVGRS-KPFSWIGWRGMNRTDCLRE 908 Query: 200 IRKRPMIITGTDD--LPPSGSPILTDD------IEIGTLGVVVGKKALA 240 RK+ + + ++ + P G+ ++ D +G + +L Sbjct: 909 DRKQLVGLRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLG 957 >gi|237814300|ref|YP_002898751.1| glycine cleavage system T protein [Burkholderia pseudomallei MSHR346] gi|237506294|gb|ACQ98612.1| glycine cleavage system T protein [Burkholderia pseudomallei MSHR346] Length = 398 Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 78 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 137 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 138 RVVVNAGTAE 147 >gi|217423966|ref|ZP_03455466.1| aminomethyltransferase [Burkholderia pseudomallei 576] gi|238561586|ref|ZP_00441876.2| glycine cleavage system T protein [Burkholderia mallei GB8 horse 4] gi|242314700|ref|ZP_04813716.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106b] gi|251767081|ref|ZP_04819947.1| glycine cleavage system T protein [Burkholderia mallei PRL-20] gi|254201577|ref|ZP_04907941.1| glycine cleavage system T protein [Burkholderia mallei FMH] gi|254206911|ref|ZP_04913262.1| glycine cleavage system T protein [Burkholderia mallei JHU] gi|76581070|gb|ABA50545.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710b] gi|121228292|gb|ABM50810.1| glycine cleavage system T protein [Burkholderia mallei SAVP1] gi|147747471|gb|EDK54547.1| glycine cleavage system T protein [Burkholderia mallei FMH] gi|147752453|gb|EDK59519.1| glycine cleavage system T protein [Burkholderia mallei JHU] gi|217393029|gb|EEC33051.1| aminomethyltransferase [Burkholderia pseudomallei 576] gi|238524383|gb|EEP87816.1| glycine cleavage system T protein [Burkholderia mallei GB8 horse 4] gi|242137939|gb|EES24341.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106b] gi|243063901|gb|EES46087.1| glycine cleavage system T protein [Burkholderia mallei PRL-20] Length = 398 Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 78 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 137 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 138 RVVVNAGTAE 147 >gi|170078310|ref|YP_001734948.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. PCC 7002] gi|254797882|sp|B1XP99|GCST_SYNP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169885979|gb|ACA99692.1| glycine cleavage system T protein [Synechococcus sp. PCC 7002] Length = 363 Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 93/313 (29%), Gaps = 50/313 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G++ I +Q ++ +++ L A+ + +L G I+ + + Sbjct: 51 SHMGKFQLAGENLIAAMQKLVPSNLARLAPGQAQYTVLLNDHGGIIDDVIYYHQGDRQGF 110 Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLS---------------------- 103 L ++ + D L + L + + + ++L+ Sbjct: 111 LIVNAATTQKDWDWLTHH-LTAQGITLTDVSQENILLAIQGPQAEKALQPVVENLDLATL 169 Query: 104 ----WNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147 Q F ++FI A L + + L Sbjct: 170 KLFNHGQGQIFGETAFIARTGYTGEDGFEVMVAPTAGKKLWSALIDAGVMPCGLGARDTL 229 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206 R+ G+ D P +A + L I K +I ++++ + + R+ + Sbjct: 230 RLEAGLHLYGQDM-DDDTTPLEAGLGWL--IHWQEKDAFIAKDILQTQKAAGVQRRLVGL 286 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + +L + +G + ALA ++ + + Sbjct: 287 EMQGRGIARHDYSVLVNGEAVGLVTSGTMSPTLEKAIALAYLPLEFSKVGQAVTVEIRGK 346 Query: 261 GVRVKASFPHWYK 273 + +Y+ Sbjct: 347 QYPAQVVKKPFYR 359 >gi|116255763|ref|YP_771596.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115260411|emb|CAK03515.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 985 Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 29/81 (35%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ GK A FL I L AR +L G I S+ + Sbjct: 646 LCDVSTLGKIEISGKDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTASRFSD 705 Query: 63 DTFILEIDRSKRDSLIDKLLF 83 D F + + ++ L F Sbjct: 706 DHFFMTTTTALAAGVLTHLEF 726 >gi|321461805|gb|EFX72833.1| hypothetical protein DAPPUDRAFT_308047 [Daphnia pulex] Length = 403 Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK + FL++++ D+ +LP S T G I+ F+++K + + Sbjct: 85 IHGKDNVKFLESLMVGDIQSLPNNHGTLSVFTTDSGGIIDDFIVNKTSLGYLYVVSNAGC 144 Query: 74 RDSLIDKL-LFYKLRSN----VIIEIQPINGVVLSWNQ 106 RD + L L V IE+ G++ Sbjct: 145 RDKDLALLNSKLALAKKEGLDVDIEVLKERGLLAIQGP 182 >gi|319783089|ref|YP_004142565.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168977|gb|ADV12515.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 856 Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 89/298 (29%), Gaps = 70/298 (23%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67 +V G +A FL ++T + + + +L GK++ F I+K ED F++ Sbjct: 495 EVSGPAAEDFLNRLMTNRMPK--TRRIVLTPMLNEFGKLIGDFTIAKAAEDRFMIWGSSA 552 Query: 68 -----------EIDRS--------------------KRDSLIDKLLFYKLRSNVIIEIQP 96 + + K L+ KL V +++ Sbjct: 553 AQKYHMRWFEKHLPKDGTVRIHRFDQTLVGLSIAGPKSRDLLQKL--------VDVDVST 604 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139 + + + ++ R + L + W + Sbjct: 605 KAFRFMDFREMAVGGAPCMVN-RITYTGDLGYEIWMAPAYERLVYKAIKDAGEEFGLVDF 663 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN- 198 ++ +R+ + P P + MD I L K +IG+E ++ Q Sbjct: 664 GMRALLSMRLEKNFPTWFRELRP-IYGPFEGAMDRF--IKLEKNDFIGREAAAKEQAEGP 720 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 +R+ I+ TD PI G V R DK I+ A Sbjct: 721 KLRRVSFIVDATDADVMGDEPIWA--KVSKDYGTVEKPHGYGAPRFDKGGKEIRGSKA 776 >gi|254449580|ref|ZP_05063017.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238] gi|198263986|gb|EDY88256.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238] Length = 1007 Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TLP R + G + ++++I++DT++ Sbjct: 681 VKGPDAGKFLDMMYTNMMSTLPVGKCRYGLMCGENGFLSDDGVVARIDDDTWLCHTTTGG 740 Query: 74 RDSLIDKL 81 D++ + Sbjct: 741 ADTVHAHM 748 >gi|330972174|gb|EGH72240.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. aceris str. M302273PT] Length = 360 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGPQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|319781765|ref|YP_004141241.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167653|gb|ADV11191.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 418 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 93/328 (28%), Gaps = 79/328 (24%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI------- 66 + G A + A+I D+ L + G ++ L+ +++E TF Sbjct: 77 IAGPDAERMMDALIPRDIKKLQVGQIYYAPWCDENGHVVGDGLVFRMDETTFRVSADPGL 136 Query: 67 ---------LEID------------------RSKRDSL---IDKLLFYKLRSNVIIEIQP 96 L++ R +++ + +L F +L + V I + Sbjct: 137 SWWKQHAEGLDVRVTDISDSYGILTLQGPRSREVLEAVTQSVQELPFSRL-AIVTIAGRR 195 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156 + + + EH + D+ ++ D + + + R+ G++ Sbjct: 196 VEILRQGFTGEHGYELWVKADDGAAVWDA-VEAAGKPFGILPAGAWALDIARLEAGLLIV 254 Query: 157 NTDFLPS---------------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 D+ + P D + L + K +IG+ + R+ + R Sbjct: 255 GYDYTSAGPDHGGASIQAAGKYRASPFDLGLGRL--VDFRKADFIGKAALQRMSNTGDHR 312 Query: 202 KRP-MIITGTDDLPPSGSP----------------ILTDDIEIGTLGVVVGK------KA 238 + + I + L G E+G V Sbjct: 313 QLVGLDIDWSQALDGKGLESNAPGNLRRVQWYPLKAFRGGKEVGHASSVAWSPSTGRMIG 372 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKA 266 R + + + + GV Sbjct: 373 FGHLRREAAETGTELTLKWNKDGVAADV 400 >gi|225713952|gb|ACO12822.1| Aminomethyltransferase, mitochondrial precursor [Lepeophtheirus salmonis] Length = 391 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 KV GK F++++ T D+ TL + +G I+ ++ D L + Sbjct: 75 KVYGKDRRQFIESLTTLDLKTLKEDSGSLTIFTNEKGGIVDDLIVMNTSLDFLYLVTNAG 134 Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWN-------QEHTFSN-------- 112 ++ I + L + +EI + ++ Q HT + Sbjct: 135 CKEKDILLMKKKVLEMKSDNMDIELEIINDHALIAIQGPKMAEYFQPHTDVDLKKLKFMQ 194 Query: 113 ------SSFIDERFSI-----------------ADVLLHRTWGHNEKI-ASDIKTYHELR 148 R + A+ +L + N I + + LR Sbjct: 195 TSLGTVCGVPMCRITRCGYTGEDGVEVSIPNEHAEAVLQKLTNSNSSIKLAGLGARDSLR 254 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207 + G+ D I P +A ++ L S K G + G ++ + + + + + Sbjct: 255 LEAGLCLYGNDM-NEDITPVEASLNWLISKSRRKEGGFPGHSIILNQLSKKDFQSKRIGL 313 Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGV 262 P SG IL + + +IG + L A+ I+K I + + V Sbjct: 314 VSNGPPPRSGMEILDSKENQIGVITSGCPSPTLKHNVAMGYINKSMSKIGNTVYVKVRNK 373 Query: 263 RVKASF 268 V+A+ Sbjct: 374 IVEATI 379 >gi|255935673|ref|XP_002558863.1| Pc13g04270 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583483|emb|CAP91496.1| Pc13g04270 [Penicillium chrysogenum Wisconsin 54-1255] Length = 850 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A+ LQ + T+D+ T + +L G I + ++++D F + Sbjct: 516 VRGPGAVGLLQRLTTSDITT-KPGTVTYTLLLNDHGGIRGDIFVLRLDDDVFQI 568 >gi|78214098|ref|YP_382877.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. CC9605] gi|78198557|gb|ABB36322.1| glycine cleavage system T protein [Synechococcus sp. CC9605] Length = 375 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 87/317 (27%), Gaps = 52/317 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ G + LQ ++ +D+ + A S +L +G I ++ E Sbjct: 59 SHMGVLRLEGANPKDALQRLLPSDLHRIGPGEACYSVLLNERGGIRDDLIVYDCGAIDAE 118 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-------SNSS 114 +L I+ + DS + + + + +GV+L+ Sbjct: 119 RGALMLVINAACADSDTAWIREQMEPAGLKVTDIKKDGVLLALQGPEAIGVLQELSGEEL 178 Query: 115 FIDERF--------------------------------SIADVLLHRTWGHNEKIASDIK 142 RF + L + + Sbjct: 179 SGLPRFGHRMLNLKGLRQPVFSARTGYTGEDGAELLLNADDGQKLWQLLLDRGVTPCGLG 238 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ + D P +A + L + + ++G++ + + ++ Sbjct: 239 ARDTLRLEAAMHLYGQDM-NDETNPFEAGLGWLVHLEMPVN-FVGRQALEQAAESGPTKR 296 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256 + + P++ + +G + ALA + + Sbjct: 297 LVGLKLQGRAIARHDYPVVHNGETVGIVTSGTWSPTLEEAIALAYVPPSLAKLGTELSVE 356 Query: 257 LTVHGVRVKASFPHWYK 273 + +YK Sbjct: 357 IRGKAQPATVVRKPFYK 373 >gi|13471332|ref|NP_102901.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] gi|14022077|dbj|BAB48687.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] Length = 1002 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 17/211 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V +S I V G A FL + T TL AR +L G ++ E Sbjct: 667 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDGFAFDDGTTWRLGEQ 726 Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQ-----EHTFSN 112 F++ + ++ L ++ L+ +V G + + + Sbjct: 727 DFLMTTTTANAGKVMQHLEYFLDVIWPDLKVHVTSVTDEWAGAAIGGPKARQILAACVTG 786 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIFPH- 168 ++ + ++ + G I + G + L P Sbjct: 787 TAVDNATLPFMGIVHGQIAGVPVMICRLSFSGEMAFEVYSGAGHGTHVWEALIEAGKPFG 846 Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRIQHR 197 ++ L + + KG G E+ R R Sbjct: 847 LVTYGLEALGTMRIEKGHVTGAEIDGRTTAR 877 >gi|88809468|ref|ZP_01124976.1| glycine cleavage system T protein [Synechococcus sp. WH 7805] gi|88786687|gb|EAR17846.1| glycine cleavage system T protein [Synechococcus sp. WH 7805] Length = 369 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 90/299 (30%), Gaps = 66/299 (22%) Query: 1 MSSVYLSNQSFIKVCG---KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57 M +S+ +++ G K A LQ ++ D+ + A S +L G I +I Sbjct: 45 MGLFDISHMGVLRIHGINPKDA---LQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLII 101 Query: 58 SKIEEDT------------------------------FILEIDRSKRDSL---------- 77 + E T + L+I K D + Sbjct: 102 YDLGESTADHGKASLIVVINAACAAADTAWITEQLTPWGLQITDEKADGVLLALQGPEAL 161 Query: 78 ----------IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127 + KL + R E+ ++ V +T + + L Sbjct: 162 AWMQHLSGVDLKKLPRFAHR---TFEVPGLSRPVFCARTGYTGEDGVELLLGRDDGRSLW 218 Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187 +R + LR+ + D + P +A + L + + + G Sbjct: 219 NRLVAEG-VTPCGLGARDTLRLEAAMHLYGQDM-DADTTPFEAGLGWLVHLEMP-ATFTG 275 Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIA 242 + + R R+ + + G P++ + + G++ +A+A+A Sbjct: 276 RSALERAVETGPSRRLVGLKLKGRAIARHGYPVIHNGEQAGSITSGSWSPTLQEAIALA 334 >gi|296157518|ref|ZP_06840353.1| glycine cleavage system T protein [Burkholderia sp. Ch1-1] gi|295892290|gb|EFG72073.1| glycine cleavage system T protein [Burkholderia sp. Ch1-1] Length = 372 Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPNGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ D I + + G+ ++ + + + + A Sbjct: 112 RVVVNAGTADKDIAWFGR--------LNAEGGFGLTIT-----PRRDYAIVAVQGPNARE 158 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + +T +K ++ RI Sbjct: 159 KVWQTVPATRAATEALKPFNAARIA 183 >gi|114707355|ref|ZP_01440252.1| sarcosine oxidase, alpha subunit [Fulvimarina pelagi HTCC2506] gi|114537236|gb|EAU40363.1| sarcosine oxidase, alpha subunit [Fulvimarina pelagi HTCC2506] Length = 994 Score = 43.3 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ I T L R +L G ++ +++++ ED F Sbjct: 661 STLGKIEVVGPDAAEFMNRIYTNAWAKLKVGGCRYGLMLGENGFVMDDGVVARLAEDRFH 720 Query: 67 LEIDRSKRDSLIDKLLFY 84 + + + Y Sbjct: 721 VTTTTGGAPRVFQHMEDY 738 >gi|126727990|ref|ZP_01743811.1| aminomethyl transferase family protein [Rhodobacterales bacterium HTCC2150] gi|126702727|gb|EBA01839.1| aminomethyl transferase family protein [Rhodobacterales bacterium HTCC2150] Length = 382 Score = 43.3 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G A + + T +V + + ++IL GK + +I I +++++ Sbjct: 62 VHVSGADAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHIAVNSWLV 117 >gi|330812232|ref|YP_004356694.1| sarcosine oxidase, alpha subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380340|gb|AEA71690.1| sarcosine oxidase, alpha subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1005 Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 731 MTTTTGGAARVLQWLEIY 748 >gi|149916228|ref|ZP_01904749.1| probable aminomethyltransferase protein [Roseobacter sp. AzwK-3b] gi|149809888|gb|EDM69739.1| probable aminomethyltransferase protein [Roseobacter sp. AzwK-3b] Length = 790 Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 60/288 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------- 65 +V G A +Q +T ++ L +A+ G ++ + ++ +D F Sbjct: 464 EVTGPDAEALMQLCVTRNMKKLAVGQVVYTAMCYDHGGMIDDGTVFRLGQDNFRWIGGND 523 Query: 66 ----ILE---------------IDRSKRDSLIDKLLFYKLRS-------NVIIEIQPING 99 L D+ ++ L L + I+ Sbjct: 524 TSGLWLRQQAQERGMNAFVRNSTDQLHNIAVQGPLSREILSALIWTPPTQPTIDELEWFR 583 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIKTYHEL--------- 147 ++ + + + R + L + + H ++ I L Sbjct: 584 FTIARIGD--YDGIPLVVSRTGYSGELGYEVFCHPKHAPQVFDAIWAEGALKGMLPLGLE 641 Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 RI G++ N +F P +A + + + +IG+ + + ++ Sbjct: 642 ALDMLRIESGLIFANAEFC-DRTDPFEAGIGFAVPLKTQEDDFIGR--TALENRKAHPQR 698 Query: 203 RPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVVG----KKALAIARID 245 + + + + PSG + +IG + + K +A+AR+D Sbjct: 699 KLVGLEIESGIVPSGGDCVRMGRAQIGEITSAMRSPILGKTIALARLD 746 >gi|215708742|dbj|BAG94011.1| unnamed protein product [Oryza sativa Japonica Group] Length = 409 Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 108/336 (32%), Gaps = 72/336 (21%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+ Sbjct: 80 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 139 Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81 + L ++ RD + + Sbjct: 140 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 199 Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133 Y S+ I+I + + E F S + +A LL ++ G Sbjct: 200 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 257 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192 + LR+ G+ D I P +A + G +G ++G +V+ Sbjct: 258 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 314 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKV 247 + +R +++ P S S I+++ IG + KK +A+ + Sbjct: 315 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTSGGFSPCLKKNIAMGYVKSG 373 Query: 248 DHAIKKGMALTVHG------------VRVKASFPHW 271 H + V G V K P W Sbjct: 374 LHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKPSW 409 >gi|172064078|ref|YP_001811729.1| sarcosine oxidase alpha subunit family protein [Burkholderia ambifaria MC40-6] gi|171996595|gb|ACB67513.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria MC40-6] Length = 1003 Score = 42.9 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTS 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935 >gi|74316196|ref|YP_313936.1| glycine cleavage system aminomethyltransferase T [Thiobacillus denitrificans ATCC 25259] gi|74055691|gb|AAZ96131.1| glycine cleavage system T protein [Thiobacillus denitrificans ATCC 25259] Length = 362 Score = 42.9 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 + + G + FL+ ++ +V L A S +L G ++ +I ++E F L ++ Sbjct: 58 LDIRGTNVRAFLRRLVANNVDKLQVAGKALYSCMLNEAGGVIDDLIIYFMDESWFRLVVN 117 Query: 71 RSKRDSLIDKLLFY 84 + + + Sbjct: 118 AGTAEKDLAWMEKM 131 >gi|227543091|ref|ZP_03973140.1| glycine cleavage system aminomethyltransferase T [Corynebacterium glucuronolyticum ATCC 51866] gi|227181079|gb|EEI62051.1| glycine cleavage system aminomethyltransferase T [Corynebacterium glucuronolyticum ATCC 51866] Length = 391 Score = 42.9 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A +L AD L A+ + ++ G+I+ +I +E+ F Sbjct: 74 LSHMGEIIVSGPEATEYLNYAFIADYSKLAVGRAKYNHMVEKDGRIIDDLIIYHVEDGIF 133 Query: 66 ILEIDRSKRDSL 77 + + +++ Sbjct: 134 WVVPNAGNAETV 145 >gi|120602448|ref|YP_966848.1| glycine cleavage system T protein [Desulfovibrio vulgaris DP4] gi|120562677|gb|ABM28421.1| glycine cleavage system T protein [Desulfovibrio vulgaris DP4] Length = 376 Score = 42.9 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G A L +T ++ TL R +L G +L ++ + ED ++L ++ + Sbjct: 73 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 132 Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109 S L +L +++ E I + G++ +E T Sbjct: 133 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 191 Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155 F ++ + R + A+ L R + + + + LR+ G+ Sbjct: 192 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 251 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208 D T P +A + + + + + + R R P+ I Sbjct: 252 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 296 Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + L D +G + G A+A + V + + + RV+ Sbjct: 297 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKRPHAEEDSFIIKAARVEL 355 Query: 267 S 267 Sbjct: 356 E 356 >gi|170695670|ref|ZP_02886813.1| sarcosine oxidase, alpha subunit family [Burkholderia graminis C4D1M] gi|170139469|gb|EDT07654.1| sarcosine oxidase, alpha subunit family [Burkholderia graminis C4D1M] Length = 1000 Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 83/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ + ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99 + ++ L ++R V+ ++ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ +E T + ++ R S + L W + DI Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ PHD M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDVGM---GGLVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLADDPSFVIPEGSQIVAG 928 >gi|148553866|ref|YP_001261448.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] gi|148499056|gb|ABQ67310.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas wittichii RW1] Length = 974 Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 61/314 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A L I + TL R +L G ++ + ++ ED F++ Sbjct: 650 IEVRGPDAGKLLDFIYANTMSTLKLGKVRYGLMLNELGVVIDDGVCVRLGEDHFLVGASS 709 Query: 72 SKRDSLI----DKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------------EHTF 110 + D + + L + +V++ + V++ F Sbjct: 710 AGADRIAAWLEEWLQCEFVDHDVLVAPLTTSWSVVTLTGPRARDLLAEAGTSFPLGAEAF 769 Query: 111 SNSSF---------------------------IDERFSIADVLLHRTWGHNEKIASDIKT 143 + SF R + +L R G I Sbjct: 770 PHMSFQAGTVAGIEARVMRVSYTGETSYEINVPTGRTAELWDVLMRLGGRYGLTPIGIDA 829 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 ++ LR+ G + D T P + D + KG + G+ + H++ R + Sbjct: 830 WNLLRLEKGYLHIGAD-TDGTTTPLNIGWD---HVLRRKGDFAGKRSLMLALHQDPARLQ 885 Query: 204 PMIITGTDDLP-PSGSPILTDD----IEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254 + + P P G+ ++ + G + V + +A+A + + + Sbjct: 886 LVGLRAEGMEPLPIGAHLVRGEGADRASDGFVTSSVHSPVFGRGVALALVHGGTGRVGET 945 Query: 255 MALTVHGVRVKASF 268 +AL G R+ A+ Sbjct: 946 VALEHGGRRLTATI 959 >gi|91785717|ref|YP_560923.1| glycine cleavage system aminomethyltransferase T [Burkholderia xenovorans LB400] gi|91689671|gb|ABE32871.1| Glycine cleavage system T protein [Burkholderia xenovorans LB400] Length = 384 Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 64 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPNGGVIDDLIVYYFGEDHF 123 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 124 RVVVNAGTAD 133 >gi|300934213|ref|ZP_07149469.1| glycine cleavage system aminomethyltransferase T [Corynebacterium resistens DSM 45100] Length = 392 Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V GK A +L + + + A+ S I T G I+ + ++ ED F Sbjct: 54 LSHMGEVRVKGKDAGAYLDYAFISKMSAVKIGKAKYSMICTESGGIIDDLITYRLGEDEF 113 Query: 66 ILEIDRSKRDSLID 79 ++ + +++ Sbjct: 114 LVVPNAGNVANVVS 127 >gi|254503405|ref|ZP_05115556.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222439476|gb|EEE46155.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 811 Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 54/267 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G A +L ++T + + + +L GK++ F I + ++TF + S Sbjct: 495 KITGAGAEDYLSYLMTNTMPKV--GRIVLTPMLNEAGKLIGDFTIVRASDETFYM-FGSS 551 Query: 73 KRDS-----LIDKL------------------------LFYKLRSNVIIEIQPINGVVLS 103 + + L L + V + + Sbjct: 552 QAEVYHMRWFEKHLPDDGSVAIEAINLSLVGLSIAGPRARDVL-AKVAGDDVSNDAFRFM 610 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY----------HE 146 +E +N+ R S L + W E + + Sbjct: 611 DFREMDVANAPCKVNRISYTGDLGYEIWMTPEYERQVYTALMEAGAEFGIQNFGMRALLA 670 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-M 205 +R+ +F P P +A + + L K +IGQE R R R Sbjct: 671 MRLEKNFGTWFREFRP-IYGPFEADLGRF--VKLGKNNFIGQEAARREFEDGPKRSRVSF 727 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232 ++ D PI + IG + Sbjct: 728 VVDALDADVMGDEPIWHGNDVIGWITS 754 >gi|209515757|ref|ZP_03264620.1| glycine cleavage system T protein [Burkholderia sp. H160] gi|209503784|gb|EEA03777.1| glycine cleavage system T protein [Burkholderia sp. H160] Length = 372 Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVTKLQTPGRALYSCMLNPNGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|15921469|ref|NP_377138.1| glycine cleavage system aminomethyltransferase T [Sulfolobus tokodaii str. 7] gi|15622255|dbj|BAB66247.1| 346aa long hypothetical aminomethyltransferase [Sulfolobus tokodaii str. 7] Length = 346 Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 87/269 (32%), Gaps = 56/269 (20%) Query: 6 LSNQSFIKVCGK-SAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEED 63 LS+ +K+ GK L I D+ Y G +A L +G + + K+ + Sbjct: 48 LSHMGRLKITGKIDEFDLL---IAKDIKKASYNTMIGPTAFLNDKGGFIDDVMTYKLSDT 104 Query: 64 TFILEIDRSKRDSLIDKLL------------FYKLRSNVII------------EIQPING 99 F++ + R+ +I+ + Y + + I ++QP+ Sbjct: 105 EFLIVTNAINREKVINWIKSNSSLEVEDLTFKYAM---IAIQGRNVWNYIEKTDLQPLEF 161 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HE 146 + F+ R WG E I+ I+ Sbjct: 162 KI----NTKFLGEEVFLISRSGWTGEDGVEVWGSPEVISKIIQRLISVGVKPSGLICRDS 217 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204 +R G V D I P +A + SL K +IG+E + + + R Sbjct: 218 IRQEMGFVLYGEDI-DENITPVEARYWV---FSLDKQ-FIGREKIVEQLKNGVEKIRVGL 272 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV 233 + G +P + I D EIG + Sbjct: 273 KLKKGERSIPRKDNKIKILDNEIGYVTSS 301 >gi|148545602|ref|YP_001265704.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida F1] gi|148509660|gb|ABQ76520.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida F1] Length = 1004 Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 730 MTTTTGGAARVLQWMELY 747 >gi|294341178|emb|CAZ89579.1| putative Aminomethyltransferase (Glycine cleavage system T protein) GcvT [Thiomonas sp. 3As] Length = 386 Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 60/294 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61 S+ + + G A L+ ++ D+ LP R + QG +L ++ + Sbjct: 58 SHMGQVALRGDDAAAALETLVPMDIQGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGA 117 Query: 62 EDTFILEI-------DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 L + D + +L D+ + ++ +Q V ++ Sbjct: 118 GQELFLIVNAACKVQDVALLQTLSDRCEVVPMPEQALLALQGPQAVQTFARLVPEAADLV 177 Query: 115 FIDERF-------------------------------SIADVLLHRTWGHNEKIASDIKT 143 F+ R+ + A L E + Sbjct: 178 FMTGRWMDVPVEGGAIRIFATRSGYTGEDGLEISVSAADAQRLARLLLSLPEVEPIGLGA 237 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVV-SRIQH 196 LR+ G+ D ST P +A + +G G + G EV+ ++I Sbjct: 238 RDTLRLEAGLCLYGHDIDTSTT-PVEAGLTWAIQKVRRHG-GARAGGFPGAEVILAQIDQ 295 Query: 197 RNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV------GKKALAIA 242 N+ +R + + G D P G+ +L D G + G A+A Sbjct: 296 PNLAPRRRIGLIGLDRTPVREGTELLAADGRLAGRVSSGSFAPSAGGPVAMAYV 349 >gi|332672212|ref|YP_004455220.1| glycine cleavage system T protein [Cellulomonas fimi ATCC 484] gi|332341250|gb|AEE47833.1| glycine cleavage system T protein [Cellulomonas fimi ATCC 484] Length = 403 Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 54/142 (38%), Gaps = 8/142 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++V G A L A + + L AR + I+ G +L ++ ++ + F Sbjct: 74 LSHMGELEVTGPQAGSALDAALVGHLSALAEGRARYTMIVDEHGGVLDDLVVYRLAPERF 133 Query: 66 ILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 ++ + S RD+L ++L + + ++ + +++ + E Sbjct: 134 VVVANASNVAVVRDALRERLTGF----DAALDDASLRTALVAVQGPRAEEIVASATEPAD 189 Query: 122 IADVLLHRTWGHNEKIASDIKT 143 + V + + + + Sbjct: 190 VDAVRALKYYAAVPATVAGLSA 211 >gi|313496689|gb|ADR58055.1| SoxA_2 [Pseudomonas putida BIRD-1] Length = 1004 Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 730 MTTTTGGAARVLQWMELY 747 >gi|111019922|ref|YP_702894.1| glycine cleavage system aminomethyltransferase T [Rhodococcus jostii RHA1] gi|110819452|gb|ABG94736.1| aminomethyltransferase [Rhodococcus jostii RHA1] Length = 371 Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 33/76 (43%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G + L + ++ + A+ S + G ++ ++ ++ + F Sbjct: 53 LSHMGEIAVTGPESGAVLDYALAGELSKIGVGRAKYSLLCNAGGGVIDDLVVYRLANEHF 112 Query: 66 ILEIDRSKRDSLIDKL 81 ++ + + ++ +L Sbjct: 113 LVVANAANAPTVHREL 128 >gi|26987067|ref|NP_742492.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida KT2440] gi|24981690|gb|AAN65956.1|AE016223_10 sarcosine oxidase, alpha subunit [Pseudomonas putida KT2440] Length = 1004 Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 730 MTTTTGGAARVLQWMELY 747 >gi|325273743|ref|ZP_08139941.1| sarcosine oxidase, subunit alpha [Pseudomonas sp. TJI-51] gi|324101128|gb|EGB98776.1| sarcosine oxidase, subunit alpha [Pseudomonas sp. TJI-51] Length = 904 Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 730 MTTTTGGAARVLQWMELY 747 >gi|187925849|ref|YP_001897491.1| glycine cleavage system aminomethyltransferase T [Burkholderia phytofirmans PsJN] gi|187717043|gb|ACD18267.1| glycine cleavage system T protein [Burkholderia phytofirmans PsJN] Length = 372 Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPDGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ D I + + G+ ++ + + + + A Sbjct: 112 RVVVNAGTADKDIAWFG--------QLNAEGSFGLTIT-----PRRDYAIVAVQGPNARE 158 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + +T +K ++ RI Sbjct: 159 KVWQTVPAARAATEALKPFNAARIE 183 >gi|300022070|ref|YP_003754681.1| glycine cleavage system protein T [Hyphomicrobium denitrificans ATCC 51888] gi|299523891|gb|ADJ22360.1| glycine cleavage T protein (aminomethyl transferase) [Hyphomicrobium denitrificans ATCC 51888] Length = 373 Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 58/306 (18%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT------------------------ 46 + V G A+ FL ++T+D+ + S I+ Sbjct: 61 MVNVEGPDALAFLNHLLTSDISKAKRGDSHISNIVNEDGALIDDVLVYVDGDGKYRVSHG 120 Query: 47 ----------PQGKILLYFLISKIEEDTFI-LEIDRSKRDSLIDKLLF------YKLRSN 89 +G+ +++ ++ + L+ +S + L Y Sbjct: 121 GGSFEEAAAAAKGR--FNVTVARDDDVHILSLQGPKSL-EVLAPHTPMKLAELPYFHHEK 177 Query: 90 VIIEIQPINGVVLSWNQEHTFS-NSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHEL 147 + +P+ ++ E + S D F +L G ++ + + Sbjct: 178 TTLFGRPVEIARGGYSAERGYEVFCSAKDAEFMWDSIL---AAGKDQGVTPISWSCLDII 234 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ G++ D P + D + L+K +IG++ + + R + Sbjct: 235 RVEGGLLFFPFDMTHGDTTPWEVRADWT--VDLSKPDFIGKK--ALTAKKGKERSLITGL 290 Query: 208 -TGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGV 262 + S I +D E+G + + +LA+A+I + + + +G Sbjct: 291 DVLHSEAIAPLSKIFSDGKEVGIVTSTTYSQHLMKSLAMAQISPAFTKLGTELTIRDNGR 350 Query: 263 RVKASF 268 A+ Sbjct: 351 DFTATV 356 >gi|91762961|ref|ZP_01264926.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1002] gi|91718763|gb|EAS85413.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1002] Length = 998 Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 14/181 (7%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G A L + T L LP AR +L G ++ ++I E+ + + Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 ++ +++ L +Y + + +N V+S ++ + + R LL + + Sbjct: 730 AQAANVLSHLEYY-----LQLVWPELNVNVVSTTEQWAGAAIAGPKSRD-----LLQKLF 779 Query: 132 GHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQ 188 + + + Y E + G+ S ++ ++ NG K +GQ Sbjct: 780 PNIDASNEGLPFMGYLEADL-FGVHARIFRISFSGELAYEVNVESDNGNFMWEKIMEVGQ 838 Query: 189 E 189 E Sbjct: 839 E 839 >gi|71083970|ref|YP_266690.1| sarcosine oxidase subunit alpha [Candidatus Pelagibacter ubique HTCC1062] gi|71063083|gb|AAZ22086.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1062] Length = 998 Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 14/181 (7%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G A L + T L LP AR +L G ++ ++I E+ + + Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 ++ +++ L +Y + + +N V+S ++ + + R LL + + Sbjct: 730 AQAANVLSHLEYY-----LQLVWPELNVNVVSTTEQWAGAAIAGPKSRD-----LLQKLF 779 Query: 132 GHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQ 188 + + + Y E + G+ S ++ ++ NG K +GQ Sbjct: 780 PNIDASNEGLPFMGYLEADL-FGVHARIFRISFSGELAYEVNVESDNGNFMWEKIMEVGQ 838 Query: 189 E 189 E Sbjct: 839 E 839 >gi|260829619|ref|XP_002609759.1| hypothetical protein BRAFLDRAFT_78592 [Branchiostoma floridae] gi|229295121|gb|EEN65769.1| hypothetical protein BRAFLDRAFT_78592 [Branchiostoma floridae] Length = 828 Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 82/298 (27%), Gaps = 64/298 (21%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 + L+ +V G A L + V LP R S +LT G + ++++ + Sbjct: 507 IDLTPFGKFEVSGPDAASLLDYLF---VNELPQVGRTRISHMLTTSGGVYAEMTVTRLGQ 563 Query: 63 DTFIL-----------------------EIDRSKRDSLIDKL------LFYKLRSNVIIE 93 D F L ++ + + L L + + Sbjct: 564 DHFFLVTGSGSELHDLRWIENHVWKGGYDVTIANVTDDMGVLGIAGPRSRDVL-AKLTSG 622 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA--------------- 138 G Q+ + R S L + E A Sbjct: 623 DLSEEGFKFLSCQQLSLGGVRVRAVRISYTGELGWELYHAREDTARLYEALMSAGQEFGL 682 Query: 139 SDIKTYHE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195 D TY LR+ G + P +A +D I + K +IG++ + ++Q Sbjct: 683 GDFGTYAMGSLRLEKGFRGWGAEMTVDN-NPLEAGLDSF--IKMNKPADFIGKQALQQLQ 739 Query: 196 HRNIIRKRPMI---ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI 244 + RK + + I +G ALA + Sbjct: 740 QEGLTRKLVCLTVEVEENGPDAEGNETIWHQGKVVGFTTSGAYGYQAQKSLALAYVPL 797 >gi|118588889|ref|ZP_01546296.1| sarcosine oxidase, alpha subunit [Stappia aggregata IAM 12614] gi|118438218|gb|EAV44852.1| sarcosine oxidase, alpha subunit [Stappia aggregata IAM 12614] Length = 1000 Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL+ + T L R +L G I +I ++ ED F Sbjct: 667 STLGKIEVVGPDAAEFLERMYTNPWKKLAPGRCRYGLLLNDAGFITDDGVIGRLAEDRFH 726 Query: 67 LEIDRSKRDSLIDKLLFY 84 + S+ + Y Sbjct: 727 VTTTTGGAPSVFATMEDY 744 >gi|167031366|ref|YP_001666597.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida GB-1] gi|166857854|gb|ABY96261.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida GB-1] Length = 1004 Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I T L AR + G + + + + ++ FI Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNTWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 730 MTTTTGGAARVLQWMELY 747 >gi|115460656|ref|NP_001053928.1| Os04g0623800 [Oryza sativa Japonica Group] gi|38344172|emb|CAE03503.2| OSJNBa0053K19.11 [Oryza sativa Japonica Group] gi|113565499|dbj|BAF15842.1| Os04g0623800 [Oryza sativa Japonica Group] gi|116309756|emb|CAH66799.1| H0215F08.10 [Oryza sativa Indica Group] Length = 408 Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 56/281 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+ Sbjct: 80 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 139 Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81 + L ++ RD + + Sbjct: 140 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 199 Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133 Y S+ I+I + + E F S + +A LL ++ G Sbjct: 200 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 257 Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192 + LR+ G+ D I P +A + G +G ++G +V+ Sbjct: 258 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 314 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232 + +R +++ P S S I+++ IG + Sbjct: 315 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTS 354 >gi|283851944|ref|ZP_06369220.1| glycine cleavage system T protein [Desulfovibrio sp. FW1012B] gi|283572668|gb|EFC20652.1| glycine cleavage system T protein [Desulfovibrio sp. FW1012B] Length = 362 Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 84/297 (28%), Gaps = 59/297 (19%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + G+ A L +T D+ TL R +L G ++ +I + D ++L ++ S+ Sbjct: 59 LSGQGAAKALSTALTHDLDTLAPGKCRYGFLLNEAGGVIDDLIIYCLGPDHYMLVVNGSR 118 Query: 74 RD--------------------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107 L L F LR V + + ++ + Sbjct: 119 IAMDFETIKSRLPAGLSLVDASPDTAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFAFTE- 177 Query: 108 HTFSNSSFIDERFSIADVLLHRTW--------------GHNEKIASDIKTYHELRINHGI 153 F + R L + + + + LR+ G Sbjct: 178 --FQGVKLMVSRTGYTGELGYELFLPAAAAEALWEALVADPRVAPAGLGARDTLRLEMGY 235 Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTD 211 D P +A L Y+G+ + +R++ + + G Sbjct: 236 PLYGQDL-DEEHTPAEAGYGWLLTSPAD---YVGKGKAA------TVRQKLLALEIPGRR 285 Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 + + +G + +L A V A A RV+A+ Sbjct: 286 SARHGDAVLDKAGKTVGVVTSASFAPSLGHA----VALAYVDAPAAEAKEFRVQAAR 338 >gi|254250940|ref|ZP_04944258.1| Glycine cleavage system T protein [Burkholderia dolosa AUO158] gi|124893549|gb|EAY67429.1| Glycine cleavage system T protein [Burkholderia dolosa AUO158] Length = 377 Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 57 SHMCVVDFTGSRVRAFFERAIANNVGKLRTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 116 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 117 RVVVNAGTAD 126 >gi|325300486|ref|YP_004260403.1| Aminomethyltransferase [Bacteroides salanitronis DSM 18170] gi|324320039|gb|ADY37930.1| Aminomethyltransferase [Bacteroides salanitronis DSM 18170] Length = 361 Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ F+Q + + + L + + G I+ L+ E + ++L ++ + Sbjct: 56 VKGPHALDFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYGYEPEKYLLVVNAAN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|311249750|ref|XP_003123790.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like [Sus scrofa] Length = 823 Score = 42.9 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 67/290 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS V G+ +I L + + + S +LTP+G++ +S Sbjct: 532 IDLSPFGKFTVKGQDSIRLLDHLFANVIPQV--GCTNISHMLTPKGRVYAELTVSHQSPG 589 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVII----EIQPINGVVLSWNQ--- 106 F+L + LR NV I ++ + GV + Sbjct: 590 EFLLITGSGS--------ELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVL 641 Query: 107 ----EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIAS-------- 139 S+ +F R S L + E A+ Sbjct: 642 QKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNA 701 Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189 + TY + LR+ ++ T P +A ++ + L K +IG++ Sbjct: 702 GQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQ 758 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 + +I+ + + R+ + TDD+ P G+ + D ++ V +G+K L Sbjct: 759 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKLAASYVSIGEKTL 808 >gi|163734627|ref|ZP_02142066.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Roseobacter litoralis Och 149] gi|161392120|gb|EDQ16450.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Roseobacter litoralis Och 149] Length = 506 Score = 42.9 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 68/313 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q I T ++ TL +A+ G ++ + ++ +D F Sbjct: 175 LSPLRKFEITGPDAEALCQYIFTRNMKTLAVGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 234 Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVL------------SWNQE 107 + + +KL V+I ++ V + W Sbjct: 235 RWIGGNDYGGEWIREQAEKLGL-----KVLIRSSTDQLHNVAVQGPESRDLLRKLVWTAP 289 Query: 108 H------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------- 139 H S + F+ R L + H + A Sbjct: 290 HNPEFDQLGWFRFSPARLNDESGTPFVISRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQ 349 Query: 140 -------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 ++ +RI G++ DF T P +A + + +IG++ + Sbjct: 350 AHGIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGVGFTVPLKSKTDDFIGRDALL 408 Query: 193 RIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKV 247 R + ++ + + ++ G + ++G + + K +A+AR+D V Sbjct: 409 R--RKENPMRKLVGLEIDSNVDVGHGDCLHVGRAQVGEVTSSMRSPLLGKNIALARVD-V 465 Query: 248 DHAIKKGMALTVH 260 HA G L V Sbjct: 466 AHA-DVGTVLEVG 477 >gi|260459631|ref|ZP_05807885.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] gi|259034433|gb|EEW35690.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] Length = 1007 Score = 42.9 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 17/211 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V +S I V G A FL + T TL AR +L G ++ E Sbjct: 672 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDGFAFDDGTTWRLGEQ 731 Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQ-----EHTFSN 112 F++ + ++ L ++ +L+ +V G + + + Sbjct: 732 DFLMTTTTANAGKVMQHLEYFLDMVWPELKVHVTSVTDEWAGAAIGGPKARQILAACVTG 791 Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIFPH- 168 ++ + ++ G I + G + L P Sbjct: 792 TAVDNATLPFMGIVRGEVAGVPVMICRLSFSGEMAFEVYSGAGHGTHVWEALIEAGKPFG 851 Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRIQHR 197 ++ L + + KG G E+ R R Sbjct: 852 LVTYGLEALGTMRIEKGHVTGAEIDGRTTAR 882 >gi|254456394|ref|ZP_05069823.1| sarcosine oxidase alpha subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207083396|gb|EDZ60822.1| sarcosine oxidase alpha subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 998 Score = 42.9 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G A L + T L LP AR +L G ++ ++I E+ + + Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729 Query: 72 SKRDSLIDKLLFY 84 ++ +++ L +Y Sbjct: 730 AQAANVLSHLEYY 742 >gi|195471950|ref|XP_002088265.1| GE18481 [Drosophila yakuba] gi|194174366|gb|EDW87977.1| GE18481 [Drosophila yakuba] Length = 405 Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 81 RVFGKDAAACLESVCTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 141 MKEQDMGIMSAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 +SF+ I +V + R E + + Sbjct: 199 QLYFMTSFVTTLAGIPNVRITRCGYTGEDGVEISVESSQVQKLTESILESGVLKLAGLGA 258 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D S P +A + L +S + + G +V+ + Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VSKRRRTTRDFPGADVILGQLKEGVS 315 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + GT P SG IL+ ++G + Sbjct: 316 RRRVGFQMLGTKPPPARSGVAILSQGQQVGQVTSGC 351 >gi|194862154|ref|XP_001969934.1| GG23666 [Drosophila erecta] gi|190661801|gb|EDV58993.1| GG23666 [Drosophila erecta] Length = 405 Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK A L++I TAD+L P + G IL +++K+ E + + + Sbjct: 81 RVFGKDAAACLESICTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 141 MKEQDMGIMSAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEAALD 198 Query: 113 -----SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKT 143 SS + I +V + R G +++ + Sbjct: 199 QLYFMSSLVTSFAGIPNVRITRCGYTGEDGVEISVESGQAQRLTESLLESGVLKLAGLGA 258 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D + P +A + L +S + + G +V+ + Sbjct: 259 RDSLRLEAGLCLYGSDI-DAKTTPVEAALAWL--VSKRRRTTRDFPGADVILGQLKEGVS 315 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I++ ++G + Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIISQGQQVGQVTSGC 351 >gi|294896047|ref|XP_002775377.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983] gi|239881569|gb|EER07193.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983] Length = 1131 Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ ++V GK + F++++ D+ L R + I TPQ I+ +I E Sbjct: 71 SLFDVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-E 129 Query: 62 EDTFILEIDRSKRDSLIDKL 81 D + ++ S + + + Sbjct: 130 GDHLYVVLNASNTEKDMKHI 149 >gi|91774794|ref|YP_544550.1| aminomethyltransferase [Methylobacillus flagellatus KT] gi|91708781|gb|ABE48709.1| aminomethyltransferase [Methylobacillus flagellatus KT] Length = 372 Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 62/302 (20%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-- 68 + V G A + ++ D+ L + +A + G I ++ + ++F + Sbjct: 57 IVNVTGPDAERAVDRLVARDITRLKPGHSLLAAEVNEAGAICDDIMVIRDAANSFRISHG 116 Query: 69 --------------IDRSKRDSLIDKL-------LFYKLRSNVIIEIQPINGVVLSWNQE 107 +D L + L+ + ++ + +++ Sbjct: 117 SGATKQQLAKAAEGLDVKVEPDLDAHILSLQGPKSLSVLK---PLLAFDLDELAYFQHKQ 173 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRIN 150 + R + L + + E I + + RI Sbjct: 174 TQLFGKTVYIARGGYSGELGYEIYCRAEDAVLLWDEILKAGEPFGVIPASWNSLELTRIE 233 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR-KRPMIIT 208 ++ + + P + M G+ + K G YIG+ V + R R ++ +I Sbjct: 234 AALLFFPFEMIEGDTTPWEVNMAW--GVDIDKPGDYIGKAAV--LASRGKERFRQVGLIC 289 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGVRV 264 +G+ I + ++G + + +LA+A I AL V+G V Sbjct: 290 RAATAVEAGAAIYHEGRQVGVVTSASYSRYLMQSLALAHI---------APALAVNGTAV 340 Query: 265 KA 266 + Sbjct: 341 EV 342 >gi|312077311|ref|XP_003141248.1| hypothetical protein LOAG_05663 [Loa loa] gi|307763588|gb|EFO22822.1| hypothetical protein LOAG_05663 [Loa loa] Length = 868 Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 94/283 (33%), Gaps = 59/283 (20%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62 + LS + I+V GK + L ++ + L +LT +G I + ++ Sbjct: 497 IDLSWRGKIEVRGKDSEKLLSYVLANEPPQL--GKLSSGLMLTKKGNIFGSLDLFHHDQY 554 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------------Q 106 FIL D + ++ L + +EI I+ + S Sbjct: 555 RSEFILITDPERESRELNWLKRAAIEIEANVEISGISEYLASLAVVGPKSREVLKELTKS 614 Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI------------------------- 141 + F S+ R A V+ RT +++ ++ Sbjct: 615 DLDFEQSAARLMRLGSAPVIAVRTTAATGQLSYELYHSRGDTLALYNSLMEVGRNYGIVN 674 Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T + +RI HG + +T P++ + + + L K +IG+ + + Sbjct: 675 FGQSTLNMMRIEHGYKIWGRELTLNT-NPYECGL--SHMVDLNKENFIGRTSCMELSQKQ 731 Query: 199 IIRKRPMII-------TGTDDLPPSGSPILTDDIE--IGTLGV 232 RK+ ++I G +P I + E +G + Sbjct: 732 WNRKQVLLICEPLTEPQGWRMIPKRMEVIRKEGSEDRVGQITS 774 >gi|225024534|ref|ZP_03713726.1| hypothetical protein EIKCOROL_01409 [Eikenella corrodens ATCC 23834] gi|224942685|gb|EEG23894.1| hypothetical protein EIKCOROL_01409 [Eikenella corrodens ATCC 23834] Length = 389 Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G+ A F + ++ DV L + A SA+L QG ++ ++ + E Sbjct: 75 SHMLVTDVTGEKAKAFFRKLLANDVAKLGFVGKALYSAMLNDQGGVIDDLIVYRGNE 131 >gi|163758641|ref|ZP_02165728.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43] gi|162283931|gb|EDQ34215.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43] Length = 815 Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 85/318 (26%), Gaps = 59/318 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S +V G A +L +IT V QG+I+ I + ED F Sbjct: 496 LPGFSRFRVEGTGARDWLSTLITGVVPK--PGRIGLGYFADAQGRIVTEMSIMAMSEDFF 553 Query: 66 ILEIDRSKR----DSLIDKLLFYKLRSNVI----------------------IEIQPING 99 L + + + L+ L L + I + Sbjct: 554 FLITAATAQWHDYEWLLKHL-PDGLNIKIEDVTEQFSCHILTGPKSREILSGITDADLGK 612 Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------- 142 L+ + R S A L E + Sbjct: 613 PWLTHQSAQVAGIWCQLI-RVSFAGELGWEIHSKVEDTPAVFDAVMAAGKPHGLKPFGMF 671 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 + LR+ D +D + K ++G++ + + + + ++ Sbjct: 672 ALNSLRLEKSYRAWKGDLSTDYTV-LQGGLDRF--VKWDKPEFVGKQALEVERQQGVSKR 728 Query: 203 RPMIITGTDDLPPS-------GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255 ++ D GS ++ + G + AL + R D K + Sbjct: 729 FVTLVIEAGDCDAPYMSTLWDGSEVVGETTSGGWGHRIDKSIALGMVRHDLTAPGTKLEV 788 Query: 256 ALTVH--GVRVKASFPHW 271 + V+A P W Sbjct: 789 EIFGERFAATVQADQPLW 806 >gi|50303773|ref|XP_451833.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640965|emb|CAH02226.1| KLLA0B06754p [Kluyveromyces lactis] Length = 393 Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G +I FL + D L K S +L G I+ LI+KI ++ F + + Sbjct: 73 TLKGPKSIEFLHKVTPTDFKALEPKNGTLSVLLNENGGIVDDTLITKINDEEFYIVTNAG 132 Query: 73 KRDSLIDKLL 82 + + L Sbjct: 133 CIERDTEFLK 142 >gi|146308477|ref|YP_001188942.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas mendocina ymp] gi|145576678|gb|ABP86210.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas mendocina ymp] Length = 781 Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS +V G A L +T DV L SA+ G +L + ++ D F Sbjct: 450 LSALRKFEVLGPDAEALLNYCLTRDVRKLAVGQVVYSAMCYEHGGMLDDGTLLRLGPDAF 509 >gi|330890959|gb|EGH23620.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. mori str. 301020] Length = 360 Score = 42.5 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPEGYR 109 Query: 66 I 66 + Sbjct: 110 L 110 >gi|326388301|ref|ZP_08209904.1| sarcosine oxidase, subunit alpha [Novosphingobium nitrogenifigens DSM 19370] gi|326207467|gb|EGD58281.1| sarcosine oxidase, subunit alpha [Novosphingobium nitrogenifigens DSM 19370] Length = 954 Score = 42.5 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 88/298 (29%), Gaps = 65/298 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL + T +L R +L G I+ + ++I ED F Sbjct: 621 STLGKIEVVGPDAAEFLNRMYTNPWKSLQPGRCRYGLLLREDGFIMDDGVSARIAEDRFH 680 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----PINGVVLSWNQ---------------- 106 L ++ + Y +++ + V++ Sbjct: 681 LTTTTGGAPRVLSMMEDYLQTEWADLDVWLTSTTEHWAVIALQGPRARDVIAPLVEGIDL 740 Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146 F + + + + L R E + K + Sbjct: 741 SPKAFPHMAVREGTIAGVPTRLFRVSFTGELGFEINVPASEGQKVWDAIFASGKQYGITP 800 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G + D T+ P+D +D + K ++G+ ++R Sbjct: 801 YGTEAMHVLRAEKGYIIVGQD-TDGTMTPYDMGLDW--AVGKKKADFVGKRSLARPDIVA 857 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVV------GKKALAIA 242 RK+ + + D + G+ I+ E IG + ALA+ Sbjct: 858 KGRKQFVGLLTEDPYEVLEEGAQIVVHPDEPVPMTMIGHVTSSYRSTTLGRSIALAVL 915 >gi|190895657|ref|YP_001985949.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652] gi|190699602|gb|ACE93686.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652] Length = 981 Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 96/302 (31%), Gaps = 63/302 (20%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL I L AR +L G I S++ + Sbjct: 642 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRLSD 701 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 + F + + ++ L F +++ P + +LS + Sbjct: 702 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILSEIVD 761 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160 S+++F + R G +I+ + +EL + G + D Sbjct: 762 EDLSDAAFPFMSARKVSLFAGRLEGRLFRISFSGELAYELAVPAGYGESVADAIMAAGEK 821 Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + T+ P D + +S TK +IG+ +++R Sbjct: 822 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKAMLAREG 879 Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241 ++ R R + + + +GS IL + G + K LA+ Sbjct: 880 LQDPERPRLVGVKPLNPASSFRTGSHILAEGAAATLENDQGYVTSSAFSPTLGHKIGLAL 939 Query: 242 AR 243 R Sbjct: 940 VR 941 >gi|116332181|ref|YP_801899.1| glycine cleavage system aminomethyltransferase T [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280091|sp|Q04PM9|GCST_LEPBJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|116125870|gb|ABJ77141.1| Aminomethyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 371 Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 7 SNQSFIKVCGKS--AIPFLQAIITAD-VLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ I + G+ + FL+ ++T + V +L + +AIL G ++ I K + Sbjct: 52 SHMGEIFITGEPKIVLDFLE-LVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSVE 110 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 +++ + S +++ LL Y S V + Q N ++ Sbjct: 111 KYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWHQIALQGPKA 156 >gi|226946735|ref|YP_002801808.1| glycine cleavage system aminomethyltransferase T [Azotobacter vinelandii DJ] gi|226721662|gb|ACO80833.1| Glycine cleavage system T protein [Azotobacter vinelandii DJ] Length = 360 Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + V G A +L+ ++ DV L A S +L +G ++ ++ + + + Sbjct: 50 SHMTVVDVLGADAGIWLRRLLANDVAHLKSPGKALYSVMLNERGGVIDDLIVY-LADFGY 108 Query: 66 ILEIDRSKRDSLIDKLL 82 L ++ + R+ +D + Sbjct: 109 RLVLNAATRERDLDWIR 125 >gi|198275602|ref|ZP_03208133.1| hypothetical protein BACPLE_01767 [Bacteroides plebeius DSM 17135] gi|198271231|gb|EDY95501.1| hypothetical protein BACPLE_01767 [Bacteroides plebeius DSM 17135] Length = 361 Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ F+Q + + + L + + G I+ L+ E D ++L ++ + Sbjct: 56 VKGPHALEFIQEVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYAYEPDKYMLVVNAAN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|107104520|ref|ZP_01368438.1| hypothetical protein PaerPA_01005598 [Pseudomonas aeruginosa PACS2] Length = 1005 Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 730 MTTTTGGAARVLEWLELY 747 >gi|152985384|ref|YP_001351517.1| sarcosine oxidase subunit alpha [Pseudomonas aeruginosa PA7] gi|150960542|gb|ABR82567.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PA7] Length = 1005 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 730 MTTTTGGAARVLEWLELY 747 >gi|218894521|ref|YP_002443391.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa LESB58] gi|254242970|ref|ZP_04936292.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 2192] gi|126196348|gb|EAZ60411.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 2192] gi|218774750|emb|CAW30567.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa LESB58] Length = 1005 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 730 MTTTTGGAARVLEWLELY 747 >gi|15600611|ref|NP_254105.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAO1] gi|116053566|ref|YP_793893.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|9951745|gb|AAG08803.1|AE004954_5 sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAO1] gi|115588787|gb|ABJ14802.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 1005 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 730 MTTTTGGAARVLEWLELY 747 >gi|218961326|ref|YP_001741101.1| aminomethyltransferase (Glycine cleavage system T protein) [Candidatus Cloacamonas acidaminovorans] gi|167729983|emb|CAO80895.1| aminomethyltransferase (Glycine cleavage system T protein) [Candidatus Cloacamonas acidaminovorans] Length = 463 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 28/67 (41%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 + + + G + L +T + + + + +L QG + ++ ++ + +FI Sbjct: 74 DHMTQLLFYGPDVVALLNRALTGNFTEMKVGQCKYTLLLNEQGGMQDDMILMRVSDTSFI 133 Query: 67 LEIDRSK 73 L I+ Sbjct: 134 LVINAGH 140 >gi|110667714|ref|YP_657525.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] gi|109625461|emb|CAJ51888.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] Length = 865 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 ++V G A F+Q + T D+ L + + + G + +++ + + +++ Sbjct: 550 MEVAGSGAGTFIQQLCTNDMD-LDIGEVKYTLMCNEGGGVRADITVTRTDTNRYLV 604 >gi|254237897|ref|ZP_04931220.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa C3719] gi|126169828|gb|EAZ55339.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa C3719] Length = 1005 Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 730 MTTTTGGAARVLEWLELY 747 >gi|33866955|ref|NP_898514.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. WH 8102] gi|59797839|sp|Q7TTS1|GCST_SYNPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|33639556|emb|CAE08940.1| putative Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus sp. WH 8102] Length = 367 Score = 42.5 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 92/303 (30%), Gaps = 50/303 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ G + LQ ++ +D+ + A + +L G I ++ E Sbjct: 51 SHMGVLRLEGPNPKDALQQLVPSDLHRIGPGEACYTVLLNESGGIRDDLIVYDCGAVDAE 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSF 115 +L I+ + ++ + + + + GV+L+ + S S Sbjct: 111 RGALVLVINAACAEADTAWIRDQMEPAGLTVSDLKAGGVLLALQGPQSIPLLEELSGESL 170 Query: 116 ID-ERF--------------------------------SIADVLLHRTWGHNEKIASDIK 142 D RF + L + + Sbjct: 171 SDLPRFGHRTLSLKDIAHPVFTGRTGYTGEDGAELLLTAADGQKLWQILLDRGVSPCGLG 230 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ + D + P +A + L + + ++G++ + + ++ Sbjct: 231 ARDTLRLEAAMHLYGMDM-NAETTPFEAGLGWLVHLEMPVD-FVGRQALEQAAESGPTKR 288 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALT 258 + + P+L + +G + L A+A + + +++ Sbjct: 289 LVGLKLQGRAIARHDYPVLHNGETVGVVTSGTWSPTLEEPIALAYVPTALAKLGAELSVE 348 Query: 259 VHG 261 + G Sbjct: 349 IRG 351 >gi|260834877|ref|XP_002612436.1| hypothetical protein BRAFLDRAFT_214317 [Branchiostoma floridae] gi|229297813|gb|EEN68445.1| hypothetical protein BRAFLDRAFT_214317 [Branchiostoma floridae] Length = 828 Score = 42.5 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 83/286 (29%), Gaps = 62/286 (21%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 G + +LQ + +V +P + +L G I+++ + +++ ++ Sbjct: 504 SGDEVVTYLQRLCCNEVD-VPVGTVLHTGMLNHYGGYENDCRIARLANNHYVIISPPNQL 562 Query: 75 ----DSLIDKL-------LFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSFI----- 116 L L + RS ++ + ++ S T S+ +F Sbjct: 563 VRSWAWLTRHLPRDGSVQIKDVTRSYAVLNVLGPRARELMSSLTDVVTMSSHNFPPNVCR 622 Query: 117 ------DERFSIADV--LLHRTWGHNEKIASDIKTYHE--------------------LR 148 R + + W + Y L Sbjct: 623 ELSIGFAPRVRAMTISHVGELGWMLYVPQEYALHLYLYIMKRGRAFGIRNVGHYVISHLC 682 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + HGI TD S++ P + + + L K +IG+ + + + +K M + Sbjct: 683 LEHGIPSLGTDL-DSSVTPFEC--QQEHTVKLDKD-FIGRSALLEQKQEGVRQKFVMFLL 738 Query: 209 GTDDL-----PPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243 DL P PI +G L + R Sbjct: 739 DNHDLENDLWPWGREPIWEGGRVVGMTTSASYGYTLKKQICLGLVR 784 >gi|150398501|ref|YP_001328968.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] gi|150030016|gb|ABR62133.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium medicae WSM419] Length = 377 Score = 42.5 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 10/115 (8%) Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215 P D P + +D +S K + G E +R++ + + M+I Sbjct: 248 PFADQPPGDSLW-ELGLDFT--VSPGKAGFRGAEEHARLKGKERFKIFGMLIDADGP-AD 303 Query: 216 SGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266 G + +D ++G + + KK++AIAR+D VD A++ G L V G + A Sbjct: 304 LGDEVYAEDRKVGVITCPSYSTLTKKSMAIARLD-VDKAVQ-GAKLEVRGKNLDA 356 >gi|86741818|ref|YP_482218.1| glycine cleavage system aminomethyltransferase T [Frankia sp. CcI3] gi|86568680|gb|ABD12489.1| aminomethyltransferase [Frankia sp. CcI3] Length = 371 Score = 42.5 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 24/61 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ ++ G A F+ A +T D+ + A+ + G ++ + ++ Sbjct: 60 SHLGKARIAGPGAAAFVNACLTNDLRRIGPGQAQYTLCCEETGGVVDDLIAYLYSDEEVF 119 Query: 67 L 67 L Sbjct: 120 L 120 >gi|289673356|ref|ZP_06494246.1| aminomethyltransferase [Pseudomonas syringae pv. syringae FF5] Length = 448 Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 120 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 179 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 180 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 239 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 E F V L G ++ + H LR+ +V+ F Sbjct: 240 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 299 Query: 161 --------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + H +D+ +S +K ++G+ V ++ R + Sbjct: 300 PFGVETQRLLRLEKGHVIISQDTDCMTHPVEIDMGWAVSRSKPFFVGRRSVDILEARPLK 359 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 360 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 419 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 420 PIRVE-DGVVVQATV 433 >gi|255264249|ref|ZP_05343591.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62] gi|255106584|gb|EET49258.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62] Length = 370 Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 98/313 (31%), Gaps = 64/313 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A Q + ++ R + G ++ ++ K++ED + L + Sbjct: 65 VQLQGPDAGKLAQYLTPRNLSKTKIGQGRYVLLCDHDGWVVNDPVLLKLDEDRYWLSVAD 124 Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92 S K + ++ KL Y + + Sbjct: 125 SDIHLWAAAIGRERGWDVQVSEPDVSPLALQGPKAEDVVAKLFGEHIREFKYFGFAQTDL 184 Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-WGHNEKIASDIKTYHELRINH 151 + P+ W+++ F + + DVL + E + R+ Sbjct: 185 DGIPLVLARSGWSKQGGFELYL---QNSAQGDVLWDKVKEAGAEFVLGPGAPNDIERLES 241 Query: 152 GIVDPNTDFLPST--IFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205 G++ D T P++ DL G +G+ + +I R Sbjct: 242 GLLSYGADMRLQTHRANPYEVGFGGLVDLAGGHDF-----VGKVALEKIAQEGANRTLVG 296 Query: 206 IITGTDDLPPSGS-PILTDDIEIGTLGVVV------GKKALAIARIDKV--DHAIKKGMA 256 +I PP ++ D ++G + + + R D D A+ +A Sbjct: 297 LIIDGHPTPPGHQVALMRDAEQVGYVSEFAFSKRLDKTIGIGLLRADLAGIDTALSITIA 356 Query: 257 LTVHGVRVKASFP 269 T+HG +A+ P Sbjct: 357 DTIHGAH-QAAIP 368 >gi|238023951|ref|YP_002908183.1| sarcosine oxidase subunit alpha family protein [Burkholderia glumae BGR1] gi|237878616|gb|ACR30948.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia glumae BGR1] Length = 1003 Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 81/271 (29%), Gaps = 54/271 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E ++ Sbjct: 666 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYM 725 Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEIQ-PING 99 + ++ L + K+R V+ ++ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDLKVRLSSVTDHWATFAVVGPNSRKVVQKVCRDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144 ++ +E T + R S + L + E I + Y Sbjct: 786 ANAAFPFMSYREGTVAGVKARVMRISFSGELAYEINVPANAGRAVWEAIMAAGAEYDITP 845 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D +I PHD M L S ++G+ +SR Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMSGLVAKSKD---FLGRRSLSRSDTMR 901 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIEI 227 RK+ + + D G I+ D Sbjct: 902 ENRKQFVGLLTEDPALVLEEGGQIVEPDASA 932 >gi|227488485|ref|ZP_03918801.1| glycine cleavage system aminomethyltransferase T [Corynebacterium glucuronolyticum ATCC 51867] gi|227091563|gb|EEI26875.1| glycine cleavage system aminomethyltransferase T [Corynebacterium glucuronolyticum ATCC 51867] Length = 391 Score = 42.5 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A +L AD L A+ + ++ G+I+ +I +E+ F Sbjct: 74 LSHMGEIIVSGPQATEYLNYAFIADYSKLAVGRAKYNHMVEKDGRIIDDLIIYHVEDGIF 133 Query: 66 ILEIDRSKRDSL 77 + + +++ Sbjct: 134 WVVPNAGNAETV 145 >gi|241764044|ref|ZP_04762083.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN] gi|241366649|gb|EER61121.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN] Length = 377 Score = 42.5 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 33/76 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A ++++ DV+ LP R +L G I+ + ++ D Sbjct: 57 SHMGQLRLVGPDAATAFESLMPVDVIDLPVGKQRYGLLLNDDGGIIDDLMFFRVARDELF 116 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + + I + Sbjct: 117 VIVNGACKVGDIAHIQ 132 >gi|163734639|ref|ZP_02142078.1| aminomethyltransferase, putative [Roseobacter litoralis Och 149] gi|161392132|gb|EDQ16462.1| aminomethyltransferase, putative [Roseobacter litoralis Och 149] Length = 387 Score = 42.5 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 26/56 (46%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + G A + + T +V + + +AIL +GK + +I + + +++ Sbjct: 68 VHLVGPDAAYVIDRVTTRNVEKIAPGRSTYAAILNSEGKFIDDCVIYHLNVNQWLV 123 >gi|149915487|ref|ZP_01904014.1| aminomethyl transferase family protein [Roseobacter sp. AzwK-3b] gi|149810776|gb|EDM70617.1| aminomethyl transferase family protein [Roseobacter sp. AzwK-3b] Length = 814 Score = 42.5 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 94/311 (30%), Gaps = 50/311 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G A +L+ +T + + A +G++L F ++ D+F Sbjct: 500 LPGFTRLWIEGAGADDWLRGFVTGGLPKVGRMNLVYVA--DARGRVLTEFSCIRLAPDSF 557 Query: 66 ILEIDR------------------SKRDSLIDK--LLFYKLRSNVIIEIQPINGVVLSW- 104 +L S R++ ++ LL S ++ + L W Sbjct: 558 VLITAATAQWHDGELVRNALPEGLSLRETTAERDALLLAGPTSRAVLGPLTDADLSLPWL 617 Query: 105 -NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRIN 150 +Q T + + R S L N I LRI Sbjct: 618 SHQHCTVAGQNAFLIRVSFTGELGWEIHAENAAIPVIYDALLAAGAKPFGMYALNSLRIE 677 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MIIT 208 G D +A ++ + K + G+ + Q R ++ +I+ Sbjct: 678 KGYRAWKGDLSTDYSM-LEAGLERF--VKFDKPQDFPGKAALLAEQQRGPSKRFVTLIVE 734 Query: 209 GTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL--TVH 260 P S + D +G V ALA+ R D + + T H Sbjct: 735 AGSTDAPYMSTLWHDGQIVGETTSGAWGYRVGASVALAMVRADLAQPGTTLEVEIYGTRH 794 Query: 261 GVRVKASFPHW 271 V+ P W Sbjct: 795 RATVQPDGPLW 805 >gi|295678117|ref|YP_003606641.1| glycine cleavage system T protein [Burkholderia sp. CCGE1002] gi|295437960|gb|ADG17130.1| glycine cleavage system T protein [Burkholderia sp. CCGE1002] Length = 372 Score = 42.5 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCMLNPNGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|66043516|ref|YP_233357.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. syringae B728a] gi|63254223|gb|AAY35319.1| Glycine cleavage system T protein [Pseudomonas syringae pv. syringae B728a] Length = 360 Score = 42.5 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGRQARAWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|28867547|ref|NP_790166.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971656|ref|ZP_03399764.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato T1] gi|301385625|ref|ZP_07234043.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. tomato Max13] gi|302061507|ref|ZP_07253048.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. tomato K40] gi|302134609|ref|ZP_07260599.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. tomato NCPPB 1108] gi|31340120|sp|Q88AS0|GCST_PSESM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|28850782|gb|AAO53861.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923612|gb|EEB57199.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato T1] gi|331014846|gb|EGH94902.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 360 Score = 42.1 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L Q ++ ++ D + Sbjct: 50 SHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQAGVIDDMIVYLTA-DGY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|330809037|ref|YP_004353499.1| aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377145|gb|AEA68495.1| putative aminomethyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 376 Score = 42.1 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 89/299 (29%), Gaps = 63/299 (21%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G A LQ T D+ L + +++L GK + ++ + + F++ Sbjct: 63 GPHAESLLQWATTRDIAKLYPGKSVYASMLDEDGKFVDDCIVYRTGPNAFMVVHGAGTGH 122 Query: 76 SLIDKLLFYKLRSNVIIEIQP------------INGVVLSWNQEHTFSNSSFIDERFSIA 123 + L+ L V + ++ + + R Sbjct: 123 EM---LVRSALGRQVAVLFDDDLHDLSLQGPLAVDFLAEHVPGVRQLPYFHHLQTRLFER 179 Query: 124 DVLLHRTWGHNEK---------------------------IASDIKTYHELRINHGI--- 153 V++ RT E+ I LR+ + Sbjct: 180 PVMISRTGYTGERGYEIFCKAADAPFLWDSILEQGASLGIIPCAFTALDWLRVESSLMFF 239 Query: 154 ------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + P D + +D +S K + G E R+ R R + + Sbjct: 240 PYDNSQMYPFADQKAGDTLW-EMGLDFT--VSPGKQAFRGAEEHLRL--RGQERFKITGV 294 Query: 208 TGTDDLP-PSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHG 261 P +G + + ++G + + K+++AIAR+ G+AL V G Sbjct: 295 LLEGVRPAEAGDTLWQGNQQVGVITCGMYSRLSKRSMAIARLSVA--CSVPGIALQVRG 351 >gi|313111649|ref|ZP_07797446.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 39016] gi|310883948|gb|EFQ42542.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 39016] Length = 810 Score = 42.1 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 475 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 534 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 535 MTTTTGGAARVLEWLELY 552 >gi|71083755|ref|YP_266475.1| sarcosine oxidase subunit alpha [Candidatus Pelagibacter ubique HTCC1062] gi|91763209|ref|ZP_01265173.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1002] gi|71062868|gb|AAZ21871.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1062] gi|91717622|gb|EAS84273.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique HTCC1002] Length = 1002 Score = 42.1 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L R +L G + + ++++E+ +I Sbjct: 670 STLGKIDIQGTDASEFLNRVYTNAWSKLAIGKCRYGLMLNEDGMVYDDGVTTRLDENHYI 729 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ KL Y Sbjct: 730 MTTTTGGAANVLGKLEDY 747 >gi|294084625|ref|YP_003551383.1| sarcosine oxidase subunit alpha [Candidatus Puniceispirillum marinum IMCC1322] gi|292664198|gb|ADE39299.1| sarcosine oxidase, alpha subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 1013 Score = 42.1 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 67/300 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + GK A FL I T L R +L G ++ + +++ E+ F Sbjct: 679 STLGKIDIQGKDAAEFLNRIYTNSWSKLAVGKCRYGLMLKDDGMVMDDGVTTRLGENHFH 738 Query: 67 LEIDRSKRDSLIDK-----------LLFY--------------------KLR-SNVIIEI 94 + ++D L Y L+ + + I++ Sbjct: 739 MTTTTGGAAGVLDWMEEWLQTEWPELDVYLTSVTEQWAVATLSGPKAAKILKDAQIDIDL 798 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKI--ASDIK 142 N +S H + I R S L W H K A DI Sbjct: 799 SASNFPFMSMQDCHIGGIPARIF-RISFTGELSFEINVHARHGLALWTHLMKAGKAHDIT 857 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + + ++ P D MD + +S K +IG+ ++R Sbjct: 858 PYGTEAMHVLRAEKGFIIVGQE-TDGSVTPTDLNMDWI--VSKQKPDFIGKRALARQSMA 914 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGV------VVGKKALAIAR 243 RK+ + + D + G+ ++ D + +G + V A+A+ + Sbjct: 915 LENRKQLVGLQTKDPKRVIVEGAHVVVDPDQPMPMEMLGQVTSSYYSPNVNRSIAMAMLK 974 >gi|324998540|ref|ZP_08119652.1| glycine cleavage system aminomethyltransferase T [Pseudonocardia sp. P1] Length = 310 Score = 42.1 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G A + +T D+ + A+ + G +L +I +D + Sbjct: 54 SHLGTVPIAGPGAAAHVNTCLTNDLGRIGPGRAQYTLACNEAGGVLDDMIIYMASDDDLL 113 Query: 67 LEIDRSKRDSLIDKLL 82 L + + ++ L Sbjct: 114 LVPNAANSTRIVTMLQ 129 >gi|89901790|ref|YP_524261.1| glycine cleavage system T protein [Rhodoferax ferrireducens T118] gi|89346527|gb|ABD70730.1| glycine cleavage system T protein [Rhodoferax ferrireducens T118] Length = 403 Score = 42.1 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A L+++I DV+ LP R +L +G I+ + D F+ Sbjct: 79 SHMGQLRLVGPDAGAALESLIPVDVIDLPVGKQRYGLLLNDEGGIIDDLMFVNRGSDIFV 138 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + + I + Sbjct: 139 I-VNGACKAGDIAHIQ 153 >gi|330720471|gb|EGG98775.1| aminomethyltransferase [gamma proteobacterium IMCC2047] Length = 342 Score = 42.1 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 95/314 (30%), Gaps = 68/314 (21%) Query: 2 SSVYLSNQSFIKVCGKSA---IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58 + + LS + G A + +L + ++ + + S ILT +G + +I Sbjct: 29 ALIDLSGLRREHIKGPDASAVVDYL---LPRNMDVIYPGKSGYSTILTDEGGVADDVIIY 85 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------------- 96 ++ +D +++ D+ + K K +V +E Sbjct: 86 RLADDHYLMASGTGDSDTAMAKATAGK---DVTVEEDDNLHIIALQGPIAHEILDANSPD 142 Query: 97 -INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------ 143 I V E T I R + + + D+ Sbjct: 143 NIAEVAFFHQIEITAFGKPAIVSRTVFTGERGYEIIAAAD-VVGDLWDAILEAGKDKGVM 201 Query: 144 ------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 + LRI ++ D + +A + + KG YIG+ + + Sbjct: 202 PLSFVGLNILRIEAALLFHPFDVSENESVW-EAGLGWS--VGKEKGDYIGK--AANEARK 256 Query: 198 NIIRKRPMIITGTDDLP-----PSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVD 248 K+ I D+ G I + E+G + + K++A+ + Sbjct: 257 GQETKKFSGIIADADVAVGEPIAGGEKIFQNGEEVGYVTAALYSTRLNKSIALCYLKP-- 314 Query: 249 HAIKKGMALTVHGV 262 + G + V G Sbjct: 315 -GLNVGDKVEVKGA 327 >gi|114771785|ref|ZP_01449178.1| sarcosine oxidase, alpha subunit family protein [alpha proteobacterium HTCC2255] gi|114547601|gb|EAU50492.1| sarcosine oxidase, alpha subunit family protein [alpha proteobacterium HTCC2255] Length = 1004 Score = 42.1 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL I T + L R + T G + ++++++E+TF+ Sbjct: 670 STLGKIIVKGSDAGKFLDMIYTNLMSNLKVGHCRYGLMCTENGFLSDDGVVARLDENTFL 729 >gi|319793005|ref|YP_004154645.1| glycine cleavage system t protein [Variovorax paradoxus EPS] gi|315595468|gb|ADU36534.1| glycine cleavage system T protein [Variovorax paradoxus EPS] Length = 392 Score = 42.1 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 3/116 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A + ++ DV+ LP R +L +G IL + + Sbjct: 62 SHMGQLRLVGPDAAAAFETLMPVDVIDLPAGKQRYGLLLNDEGGILDDLMFFNEGHCSIF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERF 120 + ++ + + + I + K+ + ++ P + ++ T + S ERF Sbjct: 122 VIVNGACKVADIAHIQQ-KIGARCEVQPLPDHALLALQGPQAAATLARLSPGIERF 176 >gi|209549483|ref|YP_002281400.1| glycine cleavage system aminomethyltransferase T [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535239|gb|ACI55174.1| glycine cleavage system T protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 378 Score = 42.1 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 91/300 (30%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +IS + +D + ++ S +++ Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMISHL-DDHLFVVVNASCKEA 129 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 130 DLAHLQTHIGDRCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A + R H + A + LR+ G+ D Sbjct: 190 VSRSGYSGEDGFEISIPADKAVDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G + G + R+R + + P G Sbjct: 250 TTS-PVEAALEWAMQKARRSGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307 Query: 218 -SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D EIG + V G A+ + + + + S Sbjct: 308 HAKLYADAEGKAEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPITVS 367 >gi|171316831|ref|ZP_02906041.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria MEX-5] gi|171098001|gb|EDT42818.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria MEX-5] Length = 1003 Score = 42.1 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLARSDTS 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ + Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935 >gi|325520084|gb|EGC99298.1| glycine cleavage system aminomethyltransferase T [Burkholderia sp. TJI49] Length = 372 Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|254000127|ref|YP_003052190.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. SIP3-4] gi|253986806|gb|ACT51663.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus sp. SIP3-4] Length = 966 Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 83/275 (30%), Gaps = 63/275 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A FL+ T T R + +L G ++ + +I ED F + Sbjct: 647 LEVRGPDAAEFLERFYTGSFKTQKIGRTRYALLLDEAGVMVDDGIACRIAEDYFYITAST 706 Query: 72 SKRDSLIDKLLFY-------------------------KLR---SNVIIEIQPINGVVLS 103 + ++ ++ + R S + + + Sbjct: 707 TNAAAVYREMQRWLQIWQLDVGLVNVTGAYGGINLAGPAARGILSKLTLRPLDDASLPF- 765 Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163 + + + + + + S ++ L + +G+ D F Sbjct: 766 --GAVCDTEIAGVPACLIRVGFVSDLAFEMHVPAGSAQHVWNAL-LENGVADGLRPFGTD 822 Query: 164 T--------------------IFPHDALMDLLNGISLTKGCYIGQ---EVVSRIQHRNII 200 T P +A D I K +IGQ ++++R + Sbjct: 823 TQRLLRLEMGNHLIGQDTDGLTQPFEAGSD--GAIQFAKPFFIGQRSLQIIAR----KPL 876 Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 KR + T ++ G I ++ IG G + G Sbjct: 877 NKRLVPFTLSEGY--QGETINECNLVIGADGNIKG 909 >gi|170697517|ref|ZP_02888607.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria IOP40-10] gi|170137540|gb|EDT05778.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria IOP40-10] Length = 1003 Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNDAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLTRSDTS 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935 >gi|115280177|gb|ABI85694.1| glycine cleavage system T protein [Burkholderia ambifaria AMMD] Length = 377 Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ ED F Sbjct: 57 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 116 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + I + Q G+ ++ + + + + A Sbjct: 117 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 163 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + T S++K ++ R+ Sbjct: 164 KVWTTVPAARAATSELKPFNAARVA 188 >gi|254480466|ref|ZP_05093713.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214039049|gb|EEB79709.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 809 Score = 42.1 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V GK A+ LQ + A++ + + + L +G I I+++ + F Sbjct: 485 SSFGKFEVTGKDAVTTLQNLSCANID-VDHGQVVYTQWLNERGGIEADLTIARLAANRFW 543 Query: 67 L 67 + Sbjct: 544 V 544 >gi|167042042|gb|ABZ06778.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_141F21] Length = 932 Score = 42.1 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ I + G FL I T + LP AR +L G + ++I E+ Sbjct: 596 CDVTSLGKIDIKGPDIAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 655 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122 F + ++ +++ L +Y V + P V VLS ++ + + + R + Sbjct: 656 HFHMTTTTAQAVNVLAHLEYY---LQV---VWPELNVNVLSTTEQWAGAALAGPNSR-EL 708 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLT 181 L T NE + Y E + G+ S ++ ++ G Sbjct: 709 LSKLFPETNILNEAL--PFMGYKESDL-FGVPARIFRISFSGELAYEINVESSYGTFMWE 765 Query: 182 KGCYIGQEVVS 192 K GQE+ Sbjct: 766 KIIEFGQEMNI 776 >gi|197116793|ref|YP_002137220.1| glycine cleavage system T protein [Geobacter bemidjiensis Bem] gi|197086153|gb|ACH37424.1| glycine cleavage system T protein [Geobacter bemidjiensis Bem] Length = 363 Score = 42.1 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKLL 82 V +P +R +L P G ++ ++ ++ ED ++ ++ + + + +L Sbjct: 76 VKGIPIGRSRYGFLLNPSGGVIDDLIVFRLAEDEVMIVVNAATAPNDFKVIASRLK 131 >gi|189461998|ref|ZP_03010783.1| hypothetical protein BACCOP_02667 [Bacteroides coprocola DSM 17136] gi|189431392|gb|EDV00377.1| hypothetical protein BACCOP_02667 [Bacteroides coprocola DSM 17136] Length = 362 Score = 42.1 bits (98), Expect = 0.087, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A+ F+Q + + + L + + G I+ L+ E D ++L ++ + Sbjct: 56 VKGPHALEFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYFYEPDKYMLVVNAAN 115 Query: 74 RD 75 + Sbjct: 116 IE 117 >gi|254482374|ref|ZP_05095614.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214037379|gb|EEB78046.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 384 Score = 42.1 bits (98), Expect = 0.087, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 98/303 (32%), Gaps = 60/303 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F Q + D+ + + I G I+ ++ K+ E+ F L I Sbjct: 70 VEITGPDAAKFTQFLSCRDLSKMQVGQCKYVLITDQDGGIINDPIMLKLGENHFWLSIAD 129 Query: 72 S------------------KRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQE 107 S + + L LR+ P + W E Sbjct: 130 SDVLLWAKGVAVSSGMDVRITEPDVSPLQLQGPKSRDVLRA--AFGDTPTDLKYY-WFME 186 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRINH 151 + + I R + L + + + + + RI Sbjct: 187 YDWEGVPLIISRTGWSSELGYEIFLRDGSAGDKLWEHLMAVGTPLGLKPGHTSSIRRIEA 246 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ + D + P++ MD L + + ++ + ++ I+ R + + I + Sbjct: 247 GMLSYHADMTLAN-NPYEMGMDRLVDLEMDAD-FVSKAALTSIRERGVD--QYFIGLEIE 302 Query: 212 DLPPSGS-----PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 P GS PI + ++G L + ALA+ D G+ + ++ Sbjct: 303 GAPLIGSNDAHHPIFSAGTKVGQLNSSIYSPRLKKNIALAMVATDASSEG--SGLQIDIN 360 Query: 261 GVR 263 G R Sbjct: 361 GDR 363 >gi|76155538|gb|AAX26829.2| SJCHGC04473 protein [Schistosoma japonicum] Length = 157 Score = 42.1 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 30/73 (41%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G + FL+++ AD+ L + S L G IL +I K +E + + Sbjct: 40 MQVFGNDRVNFLESLTCADISGLSSSVGTLSVFLLDDGGILDDTIIVKCKEPYLYIVSNA 99 Query: 72 SKRDSLIDKLLFY 84 + + + Sbjct: 100 ACSSKIQAHVTKM 112 >gi|88704858|ref|ZP_01102571.1| Glycine cleavage T protein (aminomethyl transferase) [Congregibacter litoralis KT71] gi|88701179|gb|EAQ98285.1| Glycine cleavage T protein (aminomethyl transferase) [Congregibacter litoralis KT71] Length = 370 Score = 42.1 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 97/308 (31%), Gaps = 48/308 (15%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G L++++ D+ L + + +G + +I++ DTF Sbjct: 52 SHMGQFILEGPGITTTLESLVPVDLEALGEHRQSYALLTNDEGGVRDDLIITRWGPDTFF 111 Query: 67 LEIDRSKRDS-------------LIDKLLFYKL--------RSNVIIEIQPINGVVLSWN 105 L ++ + + + +L L R+ V+ E+ P + Sbjct: 112 LVVNAACKAEDRAWIESQLAPGQTLRELEGQGLLAVQGPKARA-VLAELLPFAEDLTFLQ 170 Query: 106 QEHTFSNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150 H N + I + + + H++ + LR+ Sbjct: 171 GAHGELNGAPIYVTCSGYTGEDGYELSVPEAQVEAVARSLLAHDDVAPIGLGARDSLRLE 230 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP- 204 G+ + P+ P +A ++ G Y G E ++R R R Sbjct: 231 SGLCLYGHELSPAIS-PIEAKLNWSISKSRRSGGAKAGGYPGAERIAREMSEGTSRVRVG 289 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260 M + G + + + IG + +A+A +D A+ +++ V Sbjct: 290 MRVLGKRPVREGQNVLNAAGEVIGAVSSGAFAATVDAPVAMAFVDSSYAALDTELSVDVR 349 Query: 261 GVRVKASF 268 G + Sbjct: 350 GKALAVVV 357 >gi|209522406|ref|ZP_03271015.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. H160] gi|209497162|gb|EDZ97408.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia sp. H160] Length = 813 Score = 42.1 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ E ++ Sbjct: 479 STLGKIDIQGPDSAKLLNWVYTNPWTKLEVGKCRYGLMLDENGMIFDDGVTVRLAEQHYM 538 Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEI-QPING 99 + ++ L + ++R V+ ++ I+ Sbjct: 539 MTTTTGGAARVLTWLERWLQTEWPDLRVRLASVTDHWATFAVVGPMSRKVLQKVCDDIDF 598 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI---- 141 ++ +E T + ++ R S + L W ++ Sbjct: 599 ANAAFPFMTYREGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFNITP 658 Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D ++ PHD M G+ ++G+ +SR Sbjct: 659 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGM---GGLVAKSKDFLGKRSLSRSDTAK 714 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 715 SGRKQLVGLLADDASFVIPEGSQIVAG 741 >gi|110633372|ref|YP_673580.1| glycine cleavage system aminomethyltransferase T [Mesorhizobium sp. BNC1] gi|110284356|gb|ABG62415.1| glycine cleavage system T protein [Chelativorans sp. BNC1] Length = 364 Score = 42.1 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 82/261 (31%), Gaps = 37/261 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + G + FL D L ++ + +L + I+ +++++ D F+ Sbjct: 53 SHMQLFTIEGANTAAFLSRACPLDAAALEAGKSKYTVLLNEKAGIIDDLIVTRLGSDRFM 112 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------FSNSSFI 116 + + F + + ++I ++ V L+ ++ SF+ Sbjct: 113 VVANAGNAAKDEAHFRF--VARDFDVKIDALDRVFLALQGPEAESILLGAGLDLADLSFM 170 Query: 117 DERFSIADVLLHR-----------------TWGHNEKIASD-------IKTYHELRINHG 152 + R EKI +D + LR+ G Sbjct: 171 TAAEPRENWFAARSGYTGEDGFEVALPEEEARRFAEKILADERVIWIGLAARDSLRLEAG 230 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212 + D + A++ + G +IG E + R +R R + Sbjct: 231 LCLHGQDLDETIDPASAAILWAIPKKIRESGDFIGAEALRRTIAEGPVRVRVGLKPDGRQ 290 Query: 213 LPPSGSPILT-DDIEIGTLGV 232 +G+ +L + +G + Sbjct: 291 PVRTGALLLNEEGQTVGKVTS 311 >gi|292493461|ref|YP_003528900.1| sarcosine oxidase subunit alpha [Nitrosococcus halophilus Nc4] gi|291582056|gb|ADE16513.1| sarcosine oxidase, alpha subunit family [Nitrosococcus halophilus Nc4] Length = 979 Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 9/178 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + L AR +L G + +++ E+ Sbjct: 641 ADVSTLGKIDIQGADASEFLNRVYINHWSKLAVGKARYGVMLREDGYVFDDGTTARLAEN 700 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122 +++ + ++ L FY+ I P V + S + + R + Sbjct: 701 HYLMSTTTTNASAVQSHLEFYQQM------IWPDLDVKITSVTDHWAVVALAGPNSRAVL 754 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP--NTDFLPSTIFPHDALMDLLNGI 178 + R G+ + + I + + P D + L + Sbjct: 755 EGLFERRDVGNQALPFLGVMETELHGVQARIARLSFSGERAYEIAVPADYGLALWEAL 812 >gi|325002231|ref|ZP_08123343.1| FAD dependent oxidoreductase [Pseudonocardia sp. P1] Length = 827 Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 55/276 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65 ++V G A FL ++T + + +L G + ++++ E F Sbjct: 514 LEVTGPGACAFLDGLVTGKMDK-SVGSVTYTLMLDEAGGVRSDLTVARLGEQLFQVGANS 572 Query: 66 ILEID-------------------------------RSKRDSL----IDK--LLFYKLRS 88 L++D R L + L F++ R+ Sbjct: 573 HLDLDHLRRALPADGSARVRDITGGTCCIGVWGPLARDLVQPLTGDDLSHEGLKFFRARA 632 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 I P+ + LS+ E + + + + DVL + +A+ ++ LR Sbjct: 633 -AHIAGIPVTVMRLSYVGELGWEIYTGAEYGQKLWDVL-YAAGRPLGVVAAGRAAFNSLR 690 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT---KGCYIGQEVVSRIQHRNIIRKRPM 205 + G D P++A + G ++ KG ++G+ V + + R+ Sbjct: 691 LEKGYRSWGADMTTEHD-PYEAGL----GFAVRPQTKGDFVGRAAVEALDPEAVTRRLTC 745 Query: 206 IITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALA 240 + G +L D G + L Sbjct: 746 LTVDDGRSVVLGHEVVLVDGEPAGYVTSAAYAYTLG 781 >gi|172059211|ref|YP_001806863.1| glycine cleavage system aminomethyltransferase T [Burkholderia ambifaria MC40-6] gi|238689148|sp|B1YQQ3|GCST_BURA4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|171991728|gb|ACB62647.1| glycine cleavage system T protein [Burkholderia ambifaria MC40-6] Length = 372 Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + I + Q G+ ++ + + + + A Sbjct: 112 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 158 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + T S++K ++ R+ Sbjct: 159 KVWTTVPAARAATSELKPFNAARVA 183 >gi|170701968|ref|ZP_02892890.1| glycine cleavage system T protein [Burkholderia ambifaria IOP40-10] gi|229221144|ref|YP_772028.2| glycine cleavage system aminomethyltransferase T [Burkholderia ambifaria AMMD] gi|170133117|gb|EDT01523.1| glycine cleavage system T protein [Burkholderia ambifaria IOP40-10] Length = 372 Score = 42.1 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125 + ++ + I + Q G+ ++ + + + + A Sbjct: 112 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 158 Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150 + T S++K ++ R+ Sbjct: 159 KVWTTVPAARAATSELKPFNAARVA 183 >gi|254254535|ref|ZP_04947852.1| hypothetical protein BDAG_03838 [Burkholderia dolosa AUO158] gi|124899180|gb|EAY71023.1| hypothetical protein BDAG_03838 [Burkholderia dolosa AUO158] Length = 1003 Score = 42.1 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLAEQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 F N +F + R + N + + Sbjct: 785 FGNDAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ T+ Sbjct: 901 KEGRKQFVGLLTDDEQFVLPEGAQIVAKDTQVSTV 935 >gi|297171566|gb|ADI22563.1| glycine cleavage system T protein (aminomethyltransferase) [uncultured Rhizobium sp. HF0500_10F10] Length = 380 Score = 42.1 bits (98), Expect = 0.094, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 49/261 (18%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ DV L R + G IL +I+ D L ++ + +D Sbjct: 71 ADAALALETLVPVDVAGLKEGRQRYAVFTGSDGGILDDLMIANRG-DHLFLVVNAACKDQ 129 Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----- 131 I L L ++ +E + +L+ + + ++ + + R Sbjct: 130 DIAHLRA-GLEASCEVEPLT-DRALLALQGPAAEAALATLNPAIAEMRFMDVRALDLLGA 187 Query: 132 -------------GHNEKIASDIK-------------------TYHELRINHGIVDPNTD 159 G+ + +D LR+ G+ D Sbjct: 188 ACIVSRSGYTGEDGYEISVPADAAEKLAKALLALETVEPIGLGARDSLRLEAGLCLYGND 247 Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214 T P + ++ +G + G +++ + R+R ++ Sbjct: 248 IDT-TTTPVEGALEWSMQKVRKAGGDREGGFPGADIILKQLAEGATRRRVGLLPDGRAPV 306 Query: 215 PSGSPILT---DDIEIGTLGV 232 G+ + +GT+ Sbjct: 307 RGGTSLFAEAEGGAPVGTVTS 327 >gi|169848891|ref|XP_001831150.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130] gi|116507877|gb|EAU90772.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130] Length = 410 Score = 42.1 bits (98), Expect = 0.094, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N + + G A +LQ++ + D+ L + A A + +G L ED F Sbjct: 184 LENWGLLALQGPKAASYLQSLTSFDLNQLLFGKA---AFVPIEGFNLHVARGGYTGEDGF 240 Query: 66 ILEIDRSKRDSLIDKLLF 83 + I S+ + + L Sbjct: 241 EISIPPSQTEEVARLLSK 258 Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 93/299 (31%), Gaps = 59/299 (19%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 G +A FL+ + + + +LP + S +L +G I+ +I+K D F + + +R Sbjct: 95 RGATATEFLEWLTPSSLSSLPAYSSTLSLLLNEKGGIIDDTIITKHAADAFYVVTNAGRR 154 Query: 75 DSLIDKLLFYKLR--------SN--VIIEIQPINGVVLSWNQEHT--------------- 109 + + + KL V +E+ G++ + Sbjct: 155 ERDLAWIK-EKLEEWNNSEAGKKGPVELEVLENWGLLALQGPKAASYLQSLTSFDLNQLL 213 Query: 110 FSNSSFID--------ERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148 F ++F+ R R N + + LR Sbjct: 214 FGKAAFVPIEGFNLHVARGGYTGEDGFEISIPPSQTEEVARLLSKNPVQLTGLGARDSLR 273 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207 + G+ + P +A + + + G +IG + + + R+R +I Sbjct: 274 LEAGMCLYGNEI-DENTGPVEAGLTWVIPKERREAGEFIGADAIRKQIKEGPSRRRIGLI 332 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260 + + EIG + + A+ + + KKG L V Sbjct: 333 VEGAPARQGAKIVGPGNEEIGVVTSGIPSPTLGKNIAMGYVK----NGLHKKGTELQVD 387 >gi|187919753|ref|YP_001888784.1| sarcosine oxidase subunit alpha family protein [Burkholderia phytofirmans PsJN] gi|187718191|gb|ACD19414.1| sarcosine oxidase, alpha subunit family [Burkholderia phytofirmans PsJN] Length = 1000 Score = 41.7 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 96/314 (30%), Gaps = 57/314 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ + ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99 + ++ L ++R V+ ++ Q I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ +E T + ++ R S + L W + DI Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD---DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253 RK+ + + D + P GS I+ LG V I + +K Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGETAAMLGHVTSSYYSPILKRSIAMAVVKG 961 Query: 254 GMALTVHGVRVKAS 267 G+ V + S Sbjct: 962 GLDKIGETVTIPLS 975 >gi|323135588|ref|ZP_08070671.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242] gi|322398679|gb|EFY01198.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242] Length = 383 Score = 41.7 bits (97), Expect = 0.100, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 39/245 (15%) Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIE--EDTFILEIDRSKRDS----LID 79 + AD+ L R + +L G IL L++++ E+ L ++ S++ + + Sbjct: 80 LTPADLAGLAPGRTRYTQLLDESGGILDDLLVTRLPGVEERLFLVVNASRKTADFALIAA 139 Query: 80 KLLFYKL-----RSNVIIE---IQPINGVVLSWNQEHTFSNSSFID-------------- 117 +L + L R+ + ++ I G +L ++ F + D Sbjct: 140 RLPHFDLNILNDRALIALQGPCAASILGALLPGAEDLPFMSWRAFDFDGASFFVSRTGYT 199 Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169 R A+ + R H + + LR+ G+ D T P + Sbjct: 200 GEDGFEISLRADRAEDFVMRLLAHEDVAPVGLGARDALRLEAGLPLYGHDI-DETTDPVE 258 Query: 170 ALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEI 227 A + G +G + G +S R R ++ + G+ +L + EI Sbjct: 259 AGLAWSIGKRRRAEGGFPGFARISAALGDGPSRLRVGLLPQSKAPVRDGATLLAPNGEEI 318 Query: 228 GTLGV 232 G + Sbjct: 319 GLVTS 323 >gi|229593024|ref|YP_002875143.1| sarcosine oxidase subunit alpha [Pseudomonas fluorescens SBW25] gi|229364890|emb|CAY52963.1| sarcosine oxidase alpha subunit [Pseudomonas fluorescens SBW25] Length = 1005 Score = 41.7 bits (97), Expect = 0.100, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL I + L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 731 MTTTTGGAARVLQWLEIY 748 >gi|134099691|ref|YP_001105352.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] gi|291005405|ref|ZP_06563378.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] gi|133912314|emb|CAM02427.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL 2338] Length = 810 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 86/268 (32%), Gaps = 52/268 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66 +++ G+ A+ FLQ + T + + R + +L G + ++++E D F Sbjct: 497 LEISGRGALDFLQHMTTNQMA-VRPGTVRYTLLLDEAGGVRSDLTVARLERDRFQIGVNG 555 Query: 67 -LEID-------------------------------RSKRDSL------IDKLLFYKLRS 88 L++D R L F+K Sbjct: 556 NLDLDWFLRHAPADGSVVVRDITAGTCCVGVWGPLARDLVQPLSRDDFSHKGFGFFKA-K 614 Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148 + I P+ + +S+ E + + D + D L G A ++ LR Sbjct: 615 HARIAGVPVTAMRVSYVGELGWEIYADSDVGLRLWDALWEAGQG-LGVTAGGRSAFNSLR 673 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G TD P +A + + + K ++G+ + R+R + + Sbjct: 674 LEKGYRSWGTDMTTEH-NPFEAGVGF--AVRMDKADFVGRSALVEAAAE-QPRRRLVPLL 729 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234 + P+ T D +G + Sbjct: 730 MDQPEHVVMGKEPVHTADGSVGYVTSAA 757 >gi|83950160|ref|ZP_00958893.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] gi|83838059|gb|EAP77355.1| aminomethyl transferase family protein [Roseovarius nubinhibens ISM] Length = 803 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 103/317 (32%), Gaps = 59/317 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEED 63 LS+ + V G A L + LP K + +L+ G+I + I+++ +D Sbjct: 486 LSSFAKFDVSGPGAEALLDRLTAN---RLPRKQGGITLTHVLSENGRIEGEWTITRLGDD 542 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ----------EHTFSN 112 F + D+L ++V I + G+++ + SN Sbjct: 543 RFYVLSGAGTERMARDQLSL-AAGADVEISNVTDRYGMLVVAGPKSRDVLAPLTDADLSN 601 Query: 113 SSFI---DERFSIADVLLHRT---------WGHNEKIASDIKTYHELRIN---HGIVDPN 157 + F + IA + + W + +A + Y + + HGI D Sbjct: 602 AGFRWLSGQEIEIAGIPVRALRVNYVGELGWELHAPMADLARLYDAIWASGTDHGIADFG 661 Query: 158 TDF----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 L + I +A + KG +IG+ ++ I+ Sbjct: 662 VQAVNSLRMEKGYRGYAAELTNEITLIEADCQRF--YAPDKGDFIGRAATEKVHQEGIVT 719 Query: 202 KRPM-IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR---IDKVDHAIKKGMAL 257 K + TD G ++ D +G G A + V I +G+ + Sbjct: 720 KLVYGEVAATDCDIYGGEAVMQGDRVVGVCTS--GGYGHATGKSLAFAYVSPEITEGLEV 777 Query: 258 TVHGVRVKASF---PHW 271 V G R + P W Sbjct: 778 VVLGERRAFTLHDAPVW 794 >gi|254463805|ref|ZP_05077216.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium Y4I] gi|206684713|gb|EDZ45195.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium Y4I] Length = 981 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T+ TL R +L G ++ +++ E+ Sbjct: 646 CDVSTLGKIDIQGPDAGKFLDFLYTSTFSTLKAGKVRYGLMLREDGFVMDDGTTARLGEN 705 Query: 64 TFILEIDRSKRDSLIDKL 81 F++ + ++ L Sbjct: 706 HFLMTTTTAAAGQVMAHL 723 Score = 35.2 bits (80), Expect = 9.0, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 11/81 (13%) Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-----SAILTPQGKILLYFLISKIEE 62 + V G + L ++ DV + + +L +G++ F IS E Sbjct: 744 QWAQFAVAGPKSQELLNGLVDEDVNS---GTWPFMGCGEATVLGVKGRL---FRISFSGE 797 Query: 63 DTFILEIDRSKRDSLIDKLLF 83 + L + +SL +LL Sbjct: 798 HAYELAVPARYGESLFRELLK 818 >gi|239834743|ref|ZP_04683071.1| FAD dependent oxidoreductase domain protein [Ochrobactrum intermedium LMG 3301] gi|239822806|gb|EEQ94375.1| FAD dependent oxidoreductase domain protein [Ochrobactrum intermedium LMG 3301] Length = 813 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +V G A +L I+ S LTP+G + ++++++++ +F + Sbjct: 498 EVSGPGAEAWLDGILAN--RLPKAGRVNLSHHLTPKGGVQAEYVVARLDDGSFYM 550 >gi|213406629|ref|XP_002174086.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275] gi|212002133|gb|EEB07793.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275] Length = 399 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 50/278 (17%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G++A FL++I + + L + S G I+ +ISK ++ T+ + + + Sbjct: 89 VRGENATAFLESITPSSLQELKPMHSTLSVFTNETGGIVDDTIISKHDDKTYYIVTNAAC 148 Query: 74 RD----SLIDKLLF--------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 D +L L ++ +I +Q V TF S + + Sbjct: 149 ADKDTENLSKNLNKWTKGGVTIDRIEGRALIALQGPEAVAALAKLAVTFDFPSLKFGKSA 208 Query: 122 IADVLLHRTWGH----------------------NEKIASD-------IKTYHELRINHG 152 DVL E + +D + LR+ G Sbjct: 209 YIDVLGANCLVSRSGYTGEDGVEMSVPADDSMKIAETLLADSRVQPIGLGARDSLRLEAG 268 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 + D T P + + + G +G ++G + + + +R + Sbjct: 269 MCLYGNDI-DDTTSPVEGSLSWVIGKRRRSEGNFVGSSRILK-ELMGGPSRRRVGFLVQG 326 Query: 212 DLPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243 GS + D + +G + A+ R Sbjct: 327 APAREGSAVEVDGVNVGRVTSGCPSPSLGKNIAMGYVR 364 >gi|220934867|ref|YP_002513766.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] gi|219996177|gb|ACL72779.1| glycine cleavage T protein (aminomethyl transferase) [Thioalkalivibrio sp. HL-EbGR7] Length = 963 Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 51/305 (16%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +S ++V G A F+ + T + T+ + R + ++ G ++ + ++ E Sbjct: 627 LIDVSTLGKVEVFGPDAARFMDQLYTLKLSTVKQGMTRYALMVDEAGVVIDDGVCARWGE 686 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117 + F + + +++ ++ N+ +++ + S N + Sbjct: 687 EHFYVSTTTTGAEAIFRQMQRMIGEWNLKVDVVNRTSQLASMNIAGPLTRDVLQPLTDVD 746 Query: 118 ---ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHE----------- 146 F R G A + + Sbjct: 747 LSQAAFPFLGARQGRVAGVPAWLFRVGFVGELGFEIHVPAAQALHVWEALMEAGASRGIR 806 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G + D T P DA M + K + G+ + ++ R Sbjct: 807 PFGVEAQRQLRLEKGHLIVGQD-TDGTSSPFDANMAW--AVKFDKPFFQGKRSLQILKER 863 Query: 198 NIIRKRPMIITGTDDLPPSGS--PILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKG 254 R + G+ P ++ DD G + + +L A + VD + Sbjct: 864 AANRLVGFRLPGSHPGPIPRECHLVIHDDDIAGRVTSIGYSPSLKAWVGLAMVDKTLADA 923 Query: 255 MALTV 259 L++ Sbjct: 924 AQLSI 928 >gi|111224531|ref|YP_715325.1| glycine cleavage system aminomethyltransferase T [Frankia alni ACN14a] gi|123044103|sp|Q0RFF6|GCST_FRAAA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|111152063|emb|CAJ63788.1| Aminomethyltransferase (Glycine cleavage system T protein) [Frankia alni ACN14a] Length = 365 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 89/320 (27%), Gaps = 71/320 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +V G A F+ A ++ D+ + A+ + +G ++ + + + Sbjct: 54 SHLGKAEVTGAGAAEFVNACLSNDLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVL 113 Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRSNVII 92 L + + +L+ L Sbjct: 114 LVPNAANNAEVVARLAAAAPAGVSVTDRHTGFGVLAVQGPAAPTLVAALGL--------- 164 Query: 93 EIQPINGVVLSWNQEH------TFSNSSFIDER-------FSIADVLLHRTWGHNEKIAS 139 P +G +S+ + S + ER + L + E + + Sbjct: 165 ---PTDGAYMSFVEAAWKGRPVIVCRSGYTGERGYELLPRWDDTPALWDALFAAGEGLGA 221 Query: 140 D---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + LR G D P TI P A + K + G+E + + Sbjct: 222 SPVGLGARDTLRTEMGYPLHGQDLSP-TITPVQARSGW--AVGWGKERFWGREALLAERA 278 Query: 197 RNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK----KALAIARIDK-VDHA 250 R + + +P P+ D +G + + + +A +D+ V Sbjct: 279 AGPARLLWGLASTGRAIPRPHMPVTAADGAPVGEVTSGTFSPTLRQGIGLALLDRGVAEG 338 Query: 251 IKKGMALTVHGVRVKASFPH 270 + + + P Sbjct: 339 DTVNVDVRGRPGPMTVVRPP 358 >gi|260905573|ref|ZP_05913895.1| glycine cleavage system aminomethyltransferase T [Brevibacterium linens BL2] Length = 427 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 18/186 (9%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ +++ G A FL + A + A+ ++ G +L + +I ++ F Sbjct: 54 LSHMGEVRLTGSDAAAFLDYALVAKYSKMKIGKAKYGVLVNEAGYLLDDLITYRIGDEEF 113 Query: 66 ILEIDRS----KRDSLIDKLLFYKLR-------SNVIIEIQPINGVVLSWNQEHTFSNSS 114 ++ + S +L ++L + LR + + + + ++ Sbjct: 114 LIVPNASNTPTVVAALKERLQAF-LRDESPGADAKL-FDESDVTALIAVQGPNSEAIILR 171 Query: 115 FIDERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHD- 169 +DE A D + GI + + P Sbjct: 172 ALDEGAHGEFGPATTSADGSSANDAAVDGSANDSAVNSTGITVGEAVRELKYYAWMPLTI 231 Query: 170 ALMDLL 175 A +DL+ Sbjct: 232 AGIDLM 237 >gi|221209327|ref|ZP_03582308.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1] gi|221170015|gb|EEE02481.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1] Length = 1003 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 F N +F + R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D +I T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935 >gi|154318225|ref|XP_001558431.1| hypothetical protein BC1G_03280 [Botryotinia fuckeliana B05.10] gi|150842803|gb|EDN17996.1| hypothetical protein BC1G_03280 [Botryotinia fuckeliana B05.10] Length = 475 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 82/293 (27%), Gaps = 66/293 (22%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71 + G A FLQ I A + L S +L P G I+ +I+++ + F + + Sbjct: 132 RFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTNA 191 Query: 72 SKRDSLIDKL--LFYKLRS----NVIIEIQPINGVVLSWNQEHT---------------- 109 R+ + L V E+ G+V E Sbjct: 192 GCREKDLKYLGEELEAFTKEGGEKVGWEVLDGWGLVALQGPESEEILKELLAEEMKEGGF 251 Query: 110 ----FSNSSFIDERFSIADVLLH-------------------------------RTWGHN 134 F S F+ R + + ++ G Sbjct: 252 DNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTGEDGFEISIPESETVMVTESLLKSAGET 311 Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193 + + LR+ G+ D T P +A + + G +G + G EV+ + Sbjct: 312 RLQLAGLGARDSLRLEAGMCLYGHDL-DDTTTPVEAALGWVVGKERRTEGGFHGAEVILK 370 Query: 194 IQH------RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240 + R+R +I + +IG + L Sbjct: 371 QLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGNITSGCPSPTLG 423 >gi|51244153|ref|YP_064037.1| glycine cleavage system, T protein [Desulfotalea psychrophila LSv54] gi|50875190|emb|CAG35030.1| related to glycine cleavage system, T protein [Desulfotalea psychrophila LSv54] Length = 429 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT--------LPYKIARGSAILTPQGKILLYFLIS 58 S+ S + V G + LQ T D+ LP L G +L L+ Sbjct: 55 SHMSVLTVQGAGSRAVLQHCFTKDLERAIGPKKLALPVGRCVYGLFLLEDGSVLDDALVY 114 Query: 59 KIEEDTFILEIDRSKRDSLIDKL 81 + E+++++ ++ S++ L Sbjct: 115 MLAENSYMVVVNAGMGGSVVSHL 137 >gi|260434105|ref|ZP_05788076.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis ITI-1157] gi|260417933|gb|EEX11192.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis ITI-1157] Length = 977 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G+ A FL + T TL R +L G ++ +++ + Sbjct: 642 CDVSTLGKIDIQGRDAAQFLDFVYTNTFSTLKVGRVRYGLMLREDGFVMDDGTTARLGDS 701 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 702 HFLMTTTTAAAGDVMKHLEF 721 >gi|256379661|ref|YP_003103321.1| glycine cleavage system aminomethyltransferase T [Actinosynnema mirum DSM 43827] gi|255923964|gb|ACU39475.1| glycine cleavage system T protein [Actinosynnema mirum DSM 43827] Length = 365 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 60/306 (19%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 L++ I + G A L A++ + AR + I G ++ ++ ++ E Sbjct: 50 LTHMGEIVLSGPEAGAALDHALV-GHCSAIGVGRARYTMICAESGGVVDDLIVYRLAEQE 108 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 +++ + S ++ +L R+ +++ ++ T + Sbjct: 109 YLVVANASNATTVAAEL---VERAKGFDTEVVDRSEDYALIAVQGPASTTILAGLTSTDL 165 Query: 121 SIA-------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146 + VLL RT E A + Sbjct: 166 ASVKYYASYPAEVAGKPVLLARTGYTGEDGFELFTAPADAAHVWRALLEAGQPHDLKPAG 225 Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199 LR+ G+ + P +A + + + L K G ++G+ ++ Sbjct: 226 LGCRDTLRLEAGMPLYGNELGLDRT-PFEANLGRV--VKLDKPGDFVGRAALAAAAEAGA 282 Query: 200 IRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKG 254 + T + P G P+L D EIG + ++A+A + + + + G Sbjct: 283 DSTLVGLRTASRRAPRHGYPVLDADGAEIGVVTSGALSPTLGHSVAMAYVTRANA--EPG 340 Query: 255 MALTVH 260 ALTV Sbjct: 341 TALTVD 346 >gi|222086826|ref|YP_002545360.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter K84] gi|221724274|gb|ACM27430.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter K84] Length = 985 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ GK A FL + + L LP AR +L G + S + Sbjct: 647 LCDVSTLGKIEIFGKDAAEFLNRLYSNAFLKLPIGKARYGLMLREDGIVFDDGTTSHLSP 706 Query: 63 DTFILEIDRSKRDSLIDKLLF 83 + F L + ++ + F Sbjct: 707 NHFFLTTTTAMAGEVMTHMEF 727 >gi|161520055|ref|YP_001583482.1| sarcosine oxidase alpha subunit family protein [Burkholderia multivorans ATCC 17616] gi|189353764|ref|YP_001949391.1| sarcosine oxidase alpha subunit [Burkholderia multivorans ATCC 17616] gi|160344105|gb|ABX17190.1| sarcosine oxidase, alpha subunit family [Burkholderia multivorans ATCC 17616] gi|189337786|dbj|BAG46855.1| sarcosine oxidase alpha subunit [Burkholderia multivorans ATCC 17616] Length = 1003 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 F N +F + R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D +I T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935 >gi|126740291|ref|ZP_01755980.1| probable aminomethyltransferase protein [Roseobacter sp. SK209-2-6] gi|126718746|gb|EBA15459.1| probable aminomethyltransferase protein [Roseobacter sp. SK209-2-6] Length = 790 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 95/299 (31%), Gaps = 58/299 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62 +V G A +Q ++ ++ L +A+ G ++ + ++ E Sbjct: 464 EVTGPDAEELMQLCVSRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 523 Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGV 100 L+ D+ ++ + L S + ++ + Sbjct: 524 TSGLWLQEQAGKRGLNVWVRNSTDQLHNIAVQGRHSREIL-SRIFWTPPQQPAVEELPWF 582 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLH--------------RTWGHNEK---IASDIKT 143 L+ + + +S + R + L + R W ++ ++ Sbjct: 583 RLTVARVGDVAGTSVVISRTGYSGELGYEIFCHPKDAVEIFDRVWEEGQEFGITPLGLEA 642 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LRI G++ ++F T P +A + + + +IG+ + + + ++ Sbjct: 643 LDMLRIEGGLIFAGSEFDDQTD-PFEAGIGFTVPLKSMEDDFIGR--TAVEERKAHPHRK 699 Query: 204 PMIITGTDD-LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257 + +P G + ++G + + K +A+ R+ I + + Sbjct: 700 LVGFEVEGGTIPAPGDCVRIGRAQVGEITSAMKSPILGKVIALGRVSTTHAEIGTEIEI 758 >gi|307946364|ref|ZP_07661699.1| glycine cleavage T protein [Roseibium sp. TrichSKD4] gi|307770028|gb|EFO29254.1| glycine cleavage T protein [Roseibium sp. TrichSKD4] Length = 228 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A F Q + D+ + + I +G IL ++ K+ E+ F L + Sbjct: 66 VEITGPDAARFTQMLTPRDLSNMSVGQCKYVLITNAEGGILNDPILLKLGENHFWLSLAD 125 Query: 72 S 72 S Sbjct: 126 S 126 >gi|323530100|ref|YP_004232252.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1001] gi|323387102|gb|ADX59192.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1001] Length = 1000 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 83/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ E ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLGEQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99 + ++ L ++R V+ ++ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144 ++ +E T + ++ R S + L + E + + Y Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRVSFSGELAYEVNVPANVGRAVWEALMAAGAEYDITP 845 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLADDPTFVIPEGSQIVAG 928 >gi|209546018|ref|YP_002277908.1| sarcosine oxidase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538875|gb|ACI58808.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 984 Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 63/302 (20%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL I L AR +L G I S+ + Sbjct: 645 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLALGKARYGIMLREDGFIYDDGTTSRFGD 704 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 + F + + ++ L F +++ P + +L+ + Sbjct: 705 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAIAGPKSRAILAEIVD 764 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160 S+++F + R G +I+ + +EL + G + D Sbjct: 765 EDLSDAAFPFMSARKVSLFGGRLEGRLFRISFSGELAYELAVPAGYGESVADAVMASGEK 824 Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + T+ P D + +S TK +IG+ +++R Sbjct: 825 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKAMLAREG 882 Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241 ++ R R + + + +GS IL + G + LA+ Sbjct: 883 LQDPERPRLVGVKPLNPASGFRTGSHILAEGAAATLENDQGYISSSAFSPTLGHTIGLAL 942 Query: 242 AR 243 R Sbjct: 943 VR 944 >gi|325526210|gb|EGD03841.1| sarcosine oxidase alpha subunit family protein [Burkholderia sp. TJI49] Length = 543 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 99/326 (30%), Gaps = 77/326 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 206 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 265 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 266 MTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVCQDIDF 325 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 326 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 384 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P+D M G+ ++G+ +SR Sbjct: 385 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGVVAKSKDFLGKRSLSRSDTA 440 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI---------GTLGVVV------GKKALA 240 RK+ + + D+ + P G+ I+ D ++ G + ALA Sbjct: 441 KQGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTTEPTPMIGHVTSSYYSPILKRSIALA 500 Query: 241 IAR--IDKVDH----AIKKGMALTVH 260 + + +DK+ + G +T Sbjct: 501 VVKGGLDKLGESVVIPLANGKRITAK 526 >gi|300124013|emb|CBK25284.2| Aminomethyltransferase [Blastocystis hominis] Length = 390 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 59/313 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65 S+ IK GK + FL+ ++ +D+ +L R + + G I+ +I+ + + Sbjct: 73 SHMGQIKWTGKDRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNAGDYHYE 132 Query: 66 -------------------------------------ILEIDRSKRDSLIDKLLFYKLRS 88 ++ + + +++ + + Sbjct: 133 VVNGACKYGDMEHFKKEMAKFQAEGKEVQMEYLGDIGLIALQGAMAPAVLRRFTEF---- 188 Query: 89 NVI---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139 +V I++ +N V I SI L+ E + Sbjct: 189 DVTKMPFMTGQDIKVGGVNCRVTRCGYTGEDGYEVQIPAADSIP--LVKEILKEKEVLPC 246 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + LR+ G+ TD + LM ++ G +IG + + ++ Sbjct: 247 GLGARDSLRLEAGLCLYGTDLSTAVSPVEGTLMWTISKQRRADGGFIGHKAI--MERMKT 304 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 K+ + G+ I ++ +G + +L A+ I K H + Sbjct: 305 CEKKRVGFMVQGAPARHGAKIYSNGELVGEITSGTLSPSLKKPVAMGYIKKGLHTAGTQV 364 Query: 256 ALTVHGVRVKASF 268 + V + A Sbjct: 365 EVEVRNKKYPAVV 377 >gi|300121816|emb|CBK22390.2| unnamed protein product [Blastocystis hominis] Length = 452 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 59/313 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65 S+ IK GK + FL+ ++ +D+ +L R + + G I+ +I+ + + Sbjct: 135 SHMGQIKWTGKDRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNAGDYHYE 194 Query: 66 -------------------------------------ILEIDRSKRDSLIDKLLFYKLRS 88 ++ + + +++ + + Sbjct: 195 VVNGACKYGDMEHFKKEMAKFQAEGKEVQMEYLGDIGLIALQGAMAPAVLRRFTEF---- 250 Query: 89 NVI---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139 +V I++ +N V I SI L+ E + Sbjct: 251 DVTKMPFMTGQDIKVGGVNCRVTRCGYTGEDGYEVQIPAADSIP--LVKEILKEKEVLPC 308 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + LR+ G+ TD + LM ++ G +IG + + ++ Sbjct: 309 GLGARDSLRLEAGLCLYGTDLSTAVSPVEGTLMWTISKQRRADGGFIGHKAI--MERMKT 366 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255 K+ + G+ I ++ +G + +L A+ I K H + Sbjct: 367 CEKKRVGFMVQGAPARHGAKIYSNGELVGEITSGTLSPSLKKPVAMGYIKKGLHTAGTQV 426 Query: 256 ALTVHGVRVKASF 268 + V + A Sbjct: 427 EVEVRNKKYPAVV 439 >gi|119505803|ref|ZP_01627870.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] gi|119458370|gb|EAW39478.1| aminomethyl transferase family protein [marine gamma proteobacterium HTCC2080] Length = 389 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 24/56 (42%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 I++ G A F Q + DV P R L I+ ++ ++EE+ F L Sbjct: 77 IEISGPDAAAFTQLLTPRDVENCPVGRCRYVIFLDENAGIVNDAVLFRLEENRFWL 132 >gi|78061338|ref|YP_371246.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia sp. 383] gi|77969223|gb|ABB10602.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia sp. 383] Length = 1003 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P+D M G+ ++G+ ++R Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGVVAKSKDFLGKRSLARSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ + Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935 >gi|238014916|gb|ACR38493.1| unknown [Zea mays] Length = 357 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 54/270 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G+ AIPFL++++ ADV L + QG + +I+K+ + L ++ Sbjct: 39 LSLKGRGAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNA 98 Query: 72 SKRDSLIDKL---------------------------------------------LFYKL 86 RD + + Y Sbjct: 99 GCRDKDLAHIEAHMEAFNKKGGDVKWHIHDDRSLLALQGPLAAPTLQLLTKEDLSKMY-- 156 Query: 87 RSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 S+ I+I + + E F S + +A+ +L R+ G + Sbjct: 157 FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTG--LGA 214 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRK 202 LR+ G+ D I P +A + G +G ++G +V+ + + Sbjct: 215 RDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGADVILKQLQEGPKIR 273 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 R ++T + IG + Sbjct: 274 RVGMVTQGPPARSHSELVSGSGERIGEVTS 303 >gi|221200289|ref|ZP_03573331.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD2M] gi|221205968|ref|ZP_03578982.1| putative pyridine nucleotide-disulphide oxidoreductase [Burkholderia multivorans CGD2] gi|221173980|gb|EEE06413.1| putative pyridine nucleotide-disulphide oxidoreductase [Burkholderia multivorans CGD2] gi|221179630|gb|EEE12035.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD2M] Length = 1003 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSFIDERFSIADVLLHR------------TWGHNEKIASDIKTYHE----------- 146 F N +F + V R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGVRARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D +I T+ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935 >gi|170737490|ref|YP_001778750.1| sarcosine oxidase alpha subunit family protein [Burkholderia cenocepacia MC0-3] gi|169819678|gb|ACA94260.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia MC0-3] Length = 1003 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 84/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ + Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935 >gi|310816085|ref|YP_003964049.1| glycine cleavage system T protein [Ketogulonicigenium vulgare Y25] gi|308754820|gb|ADO42749.1| glycine cleavage system T protein [Ketogulonicigenium vulgare Y25] Length = 371 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 82/275 (29%), Gaps = 52/275 (18%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 DVL L R + G IL L+ D + + ++ + +++ I L + S+ Sbjct: 83 DVLALQPGRQRYGLLTNAAGGIL-DDLMFANRGDHYYVVVNAACKETDIAHLTAHL--SD 139 Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF------------------------ 120 V I + +L+ + I RF Sbjct: 140 VADVIPVTDRALLALQGPEAEAVLEAIVPGTAAMRFMDVAIFGDLWISRSGYTGEDGYEI 199 Query: 121 ----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-- 174 +AD + + + LR+ G+ D +T P +A + Sbjct: 200 SLPEDLADAFARKLLADPRVLPIGLGARDSLRLEAGMCLYGHDIDTTTS-PVEAGLTWAI 258 Query: 175 -----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229 G G + G + R R ++ G P++ D IG Sbjct: 259 QKSRRTGGA--RAGGFPGAARILHELEHGPARLRVGLLPEGRAPLREGVPLVEDGAVIGQ 316 Query: 230 LGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260 + G++ +A+ + A +G LT Sbjct: 317 ITSGGFSPSGERPIAMGYVPTPHAA--EGTPLTAE 349 >gi|307326389|ref|ZP_07605585.1| sarcosine oxidase, alpha subunit family [Streptomyces violaceusniger Tu 4113] gi|306888052|gb|EFN19042.1| sarcosine oxidase, alpha subunit family [Streptomyces violaceusniger Tu 4113] Length = 974 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A FL + T L +AR + P G I + ++EE + Sbjct: 637 STLGKIEIWGADAGEFLNRVYTNAFKKLKPGMARYGVMCKPDGMIFDDGVTLRLEETRYF 696 Query: 67 LEIDRSKRDSLIDKL 81 +++D L Sbjct: 697 TTTTTGGAAAVLDWL 711 >gi|17548269|ref|NP_521609.1| sarcosine oxidase subunit alpha [Ralstonia solanacearum GMI1000] gi|17430515|emb|CAD17199.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 1028 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 691 STLGKIDIQGPDAVKLLNWMYTNPWGKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 750 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L ++R V+ I+ Sbjct: 751 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 810 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 811 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 869 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I PHD M ++ TK C +G+ ++R Sbjct: 870 PYGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMG--GMVAKTKDC-LGKRSLTRSDTA 925 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + D + P G+ I+T+ ++ Sbjct: 926 KEGRKQFVGLLTDDAQFVLPEGAQIVTNGTQV 957 >gi|67903334|ref|XP_681923.1| hypothetical protein AN8654.2 [Aspergillus nidulans FGSC A4] gi|40741498|gb|EAA60688.1| hypothetical protein AN8654.2 [Aspergillus nidulans FGSC A4] gi|259483127|tpe|CBF78245.1| TPA: N,N-dimethylglycine oxidase, putative (AFU_orthologue; AFUA_8G06470) [Aspergillus nidulans FGSC A4] Length = 948 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A+ LQ + T DV + + +L G I ++++ T+ + Sbjct: 606 VSGPGAVALLQGLGTVDVD-VRPGTIVYALLLNENGGIYSDVFVTRLGSFTYQI 658 >gi|195339921|ref|XP_002036565.1| GM18702 [Drosophila sechellia] gi|194130445|gb|EDW52488.1| GM18702 [Drosophila sechellia] Length = 405 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 141 MKEQDMGIMKTAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 SSFI I +V + R E + + Sbjct: 199 QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESRQAQKLTESLLESGVLKLAGLGA 258 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D + P +A + L ++ + + G +V+ + Sbjct: 259 RDSLRLEAGLCLYGSDI-DAKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 315 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I + ++G + Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGEQVGQVTSGC 351 >gi|86281958|gb|ABC91021.1| aminomethyltransferase protein [Rhizobium etli CFN 42] Length = 356 Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ S +D+ Sbjct: 49 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKDA 107 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 108 DLAHLRAHISDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 167 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A+ + R H + A + LR+ G+ D Sbjct: 168 VSRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 227 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G + G + R+R + + P G Sbjct: 228 TTS-PVEAALEWAMPKARRAGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 285 Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D EIG + V G A+ + + + V S Sbjct: 286 HARLYADAEGQTEIGEVTSGGFGPSVDGPVAMGYVPVSHAAPGTLIYAEVRGKYLPVTIS 345 >gi|289674454|ref|ZP_06495344.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. syringae FF5] Length = 360 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGVQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|167041189|gb|ABZ05947.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_001L24] Length = 781 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ LS ++ G + +Q +T +V L SA+ G ++ I ++ + Sbjct: 448 AIDLSPLRKFEIMGPDSENLMQHALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 507 Query: 63 DTF 65 D F Sbjct: 508 DNF 510 >gi|254249935|ref|ZP_04943255.1| hypothetical protein BCPG_04816 [Burkholderia cenocepacia PC184] gi|124876436|gb|EAY66426.1| hypothetical protein BCPG_04816 [Burkholderia cenocepacia PC184] Length = 1003 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + D+ + P G+ I+ D ++ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQV 932 >gi|107025575|ref|YP_623086.1| sarcosine oxidase alpha subunit family protein [Burkholderia cenocepacia AU 1054] gi|116693242|ref|YP_838775.1| sarcosine oxidase alpha subunit family protein [Burkholderia cenocepacia HI2424] gi|105894949|gb|ABF78113.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia AU 1054] gi|116651242|gb|ABK11882.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia HI2424] Length = 1003 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + D+ + P G+ I+ D ++ Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQV 932 >gi|330977310|gb|EGH77263.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 211 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGVQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|260463580|ref|ZP_05811779.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] gi|259030671|gb|EEW31948.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] Length = 982 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 13/149 (8%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + LP AR +L G +L +++ E+ F Sbjct: 650 STLGKIDVQGPDAAIFLDRVYANGFAKLPVGRARYGVMLRDDGIVLDDGTTTRLAENRFF 709 Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120 + +K ++ +L F LR V + +S ++ + + Sbjct: 710 MTTSTAKAADVLSRLEFLLDAAWPDLR--VAVTSVSDEWAAMSVAGPNSRAILAAAFPAL 767 Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRI 149 +++ L + LRI Sbjct: 768 DVSNAALPHM-----GLLESEWEGRALRI 791 >gi|158422794|ref|YP_001524086.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158329683|dbj|BAF87168.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 1002 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 83/298 (27%), Gaps = 65/298 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I L L R +L G + +++++ D F Sbjct: 661 STLGKIEVVGPDAAEFLNRIYPNAWLKLEPGRCRYGLMLKEDGFVFDDGVVARVAPDRFH 720 Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHT-------FSNSSF 115 + ++ + Y V + V++ Sbjct: 721 VTTTTGGAARVLAHMEDYLQTEWPDLKVFVTSTSEQWAVIALQGPKAREVLAPFIEGIDL 780 Query: 116 IDERFSIADVLLHRTWGHNEKI-------------------------------------A 138 E F + R G ++ Sbjct: 781 SPEAFPHMAMRTGRILGVPTRLFRVSFTGELGFEINVPTDYARTVWEALYARGAEFGITP 840 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P D + +S K ++G+ ++R Sbjct: 841 YGTETMHVLRAERGFIIVGQD-TDGTVTPDDLGLG--GMVSKQKPDFVGKRSLTRPDMLL 897 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD-DIEI-----GTLGVVVGK------KALAIA 242 RK+ + + D L G+ I+ D + + G + ALA+ Sbjct: 898 PDRKQLVGLLSEDSRTLLEEGAQIVADVNQPVPMTMLGHVTSSYDSAACGRPIALALV 955 >gi|320534459|ref|ZP_08034932.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133326|gb|EFW25801.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 168 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 2/110 (1%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67 + + V G + +L + + + TL + +L QG I L + + T L Sbjct: 23 RDVVTVTGPDRLSWLTTLSSQVLTTLEPGDGGAETLLLDAQGHITH-ALAALDDGLTLWL 81 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + + L L + V + +P + + + + D Sbjct: 82 VTEAGNGEDLATFLDSMRFMLRVEVAERPDVMALGALGEGLEALAQAARD 131 >gi|256419645|ref|YP_003120298.1| glycine cleavage system aminomethyltransferase T [Chitinophaga pinensis DSM 2588] gi|256034553|gb|ACU58097.1| glycine cleavage system T protein [Chitinophaga pinensis DSM 2588] Length = 362 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 88/313 (28%), Gaps = 69/313 (22%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DTFILEIDRS 72 + G+ A+ +Q + T D L A+ S + +G I+ L+ IEE + ++L ++ S Sbjct: 56 LKGEHALDLIQRVTTNDASKLTVGKAQYSCLPNEEGGIVDDLLVYCIEENNVYMLVVNAS 115 Query: 73 ----------------------------------KRDSLIDKLL-------FYKLRSNVI 91 S++ L Y + Sbjct: 116 NIEKDWNWISKFNTKGVEMHNISDKTCLLAIQGPNAASILQPLTTVELVNLKYYTFAK-- 173 Query: 92 IEIQPINGVVLSWNQEHTFSNSS-FIDERFSIADVLLHRTW---GHNEKIASDIKTYHEL 147 E + VV+S + +++ AD + + G + L Sbjct: 174 GEFAGVPNVVISATGYTGAGGIEIYFEDKDGAADKIWDAIFEVGGPKGLKPIGLAARDTL 233 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-----NIIRK 202 R+ G D T P +A + + TK E SR + + RK Sbjct: 234 RLEMGFCLYGNDI-DDTTSPMEAGLGWI--TKFTK------EFTSREKFEQQKAAGVTRK 284 Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255 +P I IG + L + + + Sbjct: 285 LVGFEMVDKGIPRHDYEIKDASGQVIGKVTSGTQSPSMQKAIGLGYVNTEFAAQDSEIFI 344 Query: 256 ALTVHGVRVKASF 268 A+ ++ K Sbjct: 345 AVRDKLLKAKVVK 357 >gi|294939168|ref|XP_002782345.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983] gi|239893931|gb|EER14140.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983] Length = 160 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V GK + F++++ D+ L R + I TPQ I+ +I E D + ++ Sbjct: 4 LRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-EGDHLYVVLNA 62 Query: 72 SKRDSLIDKL-LFYKLRSNVIIEIQPINGVVL 102 S + + + +V +E P ++ Sbjct: 63 SNTEKDMKHIVSRGDFDGDVSLEPHPEASLIA 94 >gi|254513725|ref|ZP_05125788.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] gi|221531955|gb|EEE35012.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium KLH11] Length = 381 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 29/56 (51%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G+ A + + T +V + + ++IL +GK + +I ++ +T+++ Sbjct: 62 VHVVGEDAAYVIDRVTTRNVEKIMPGRSIYASILNAEGKFVDDCIIYRLSVNTWLV 117 >gi|40063519|gb|AAR38319.1| oxidoreductase, FAD-binding [uncultured marine bacterium 581] Length = 814 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G+ A L I +V + + L G I I+++ E+ F Sbjct: 486 LSSFAKFRCEGRDAADVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544 Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98 ++ L L ++ ++ + P + Sbjct: 545 LVVSAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141 G + ++E R + L + E + + Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199 + LR+ + D P +A + + I K G +IG+E + R Q + + Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720 Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 R+ + + + L PI D +G + G L Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770 >gi|18645113|gb|AAL76414.1| glycine cleavage system T protein, putative [uncultured marine proteobacterium] Length = 814 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G+ A L I +V + + L G I I+++ E+ F Sbjct: 486 LSSFAKFRCEGRDAADVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544 Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98 ++ L L ++ ++ + P + Sbjct: 545 LVVSAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141 G + ++E R + L + E + + Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199 + LR+ + D P +A + + I K G +IG+E + R Q + + Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720 Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 R+ + + + L PI D +G + G L Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770 >gi|73538653|ref|YP_299020.1| sarcosine oxidase, alpha subunit, heterotetrameric [Ralstonia eutropha JMP134] gi|72121990|gb|AAZ64176.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Ralstonia eutropha JMP134] Length = 1003 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 78/273 (28%), Gaps = 54/273 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E F+ Sbjct: 666 STLGKIDIQGPDAVTLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQPI--- 97 + ++ L K+R V+ ++ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPHMKVRLSSVTDHWATFAVVGPNSRKVLRKVCEDIDF 785 Query: 98 -----------NGVVLSWNQEH---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 NG+V +FS + DI Sbjct: 786 ANDAFPFMSYRNGIVAGAKARVMRISFSGELAYEVNVPANAGRAAWEALMTAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGVVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229 RK+ + + D + P G+ IL + T Sbjct: 902 EGRKQFVGLLTDDAEFVLPEGAQILAPGTRVST 934 >gi|260905605|ref|ZP_05913927.1| putative aminomethyltransferase protein [Brevibacterium linens BL2] Length = 406 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 I+V G A F+ +IT D +P AR + G IL ++ ++ D F Sbjct: 66 IQVKGPDAEAFVNYVITRDATKIPVMRARYVILCNEAGGILNDPILLRVAIDEFW 120 >gi|330720821|gb|EGG99025.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma proteobacterium IMCC2047] Length = 319 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 35/79 (44%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +S+ I V G + L+ ++ D+ TLP R S + +G + ++ + E + Sbjct: 1 MSHMGQIIVSGPTVSADLEKLLPIDLDTLPVNQQRYSLLTNQKGGVRDDVMVCRRGEADY 60 Query: 66 ILEIDRSKRDSLIDKLLFY 84 +L ++ + + L + Sbjct: 61 LLVVNAACKSDDYAYLRAH 79 >gi|312092130|ref|XP_003147229.1| hypothetical protein LOAG_11663 [Loa loa] gi|307757604|gb|EFO16838.1| hypothetical protein LOAG_11663 [Loa loa] Length = 67 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 4/57 (7%) Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 +GS + ++ G + GKK LA+ I + ++ P W+ Sbjct: 3 TGSLVNSEGRRAGKVIACTGKKGLALVPISRNTSPTH----FQSMNEDIEIFLPPWW 55 >gi|111018820|ref|YP_701792.1| sarcosine oxidase [Rhodococcus jostii RHA1] gi|110818350|gb|ABG93634.1| sarcosine oxidase [Rhodococcus jostii RHA1] Length = 954 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 89/271 (32%), Gaps = 61/271 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A L I T + TL + R + G ++ + ++++D F Sbjct: 617 STLGKIDVQGPDAGVLLDMIYTNMMSTLKVGMVRYGVMCGVDGMVIDDGTVMRLDDDRFQ 676 Query: 67 LEIDRSKRDSLID-----------KLLFYKLR------------------SNVIIEIQPI 97 + ++D L ++R +VI E+ P Sbjct: 677 VFTTTGGAAKILDWMEEWLQTEWPHL---RVRLTSVTEQWATFPVVGPRSRDVIGEVFPD 733 Query: 98 NGV------VLSWNQEHTFSNSSFIDERFSIADVL--------------LHRTWGHNEK- 136 V ++W + + R S + L R EK Sbjct: 734 LDVTNDAFGFMAWR-DTSLGGVHVRVARISFSGELAFEVNVDGWHAPAVWARLIAAGEKF 792 Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +T H LR G D T+ P D M +S K +IG+ +R Sbjct: 793 DITPYGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSW--AVSKKKRDFIGKRSFTRA 849 Query: 195 QHRNIIRKRPMIITGTD--DLPPSGSPILTD 223 +++N +RK + + D + P G+ I+ + Sbjct: 850 ENQNPLRKEFVGLLPLDKQTVLPEGAQIIEE 880 >gi|110680999|ref|YP_684006.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Roseobacter denitrificans OCh 114] gi|109457115|gb|ABG33320.1| glycine cleavage T-protein (aminomethyl transferase) family protein [Roseobacter denitrificans OCh 114] Length = 790 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 68/313 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q I T ++ TL +A+ G ++ + ++ +D F Sbjct: 459 LSPLRKFEIMGPDAEALCQYIFTRNMKTLAVGGVVYTAMCYEHGGMIDDGTVFRLAKDNF 518 Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVL------------SWNQE 107 + + +KL V+I ++ V + W Sbjct: 519 RWIGGSDYGGEWIREQAEKLGL-----KVLIRSSTDQLHNVAVQGPESRDLLRKLVWTAP 573 Query: 108 H------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------- 139 H + + F+ R L + H + A Sbjct: 574 HNPEFDQLGWFRFTPARLRDETGTPFVVSRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQ 633 Query: 140 -------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 ++ +RI G++ DF T P +A + + +IG++ + Sbjct: 634 AHGIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKTDDFIGRDALI 692 Query: 193 RIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKV 247 R + ++ + + ++ G + ++G + + K +A+AR+D V Sbjct: 693 R--RKENPMRKLVGLEIDSNVDVGHGDCLHVGRAQVGEVTSSMRSPLLGKNIALARVD-V 749 Query: 248 DHAIKKGMALTVH 260 HA+ G AL V Sbjct: 750 AHAV-AGTALEVG 761 >gi|226502434|ref|NP_001145825.1| hypothetical protein LOC100279332 [Zea mays] gi|195639442|gb|ACG39189.1| aminomethyltransferase [Zea mays] gi|219884573|gb|ACL52661.1| unknown [Zea mays] Length = 409 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 54/270 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + + G+ AIPFL++++ ADV L + QG + +I+K+ + L ++ Sbjct: 91 LSLKGRGAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNA 150 Query: 72 SKRDSLIDKL---------------------------------------------LFYKL 86 RD + + Y Sbjct: 151 GCRDKDLAHIEAHMEAFNKKGGDVKWHIHDDRSLLALQGPLAAPTLQLLTKEDLSKMY-- 208 Query: 87 RSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143 S+ I+I + + E F S + +A+ +L R+ G + Sbjct: 209 FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTG--LGA 266 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRK 202 LR+ G+ D I P +A + G +G ++G +V+ + + Sbjct: 267 RDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGADVILKQLQEGPKIR 325 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 R ++T + IG + Sbjct: 326 RVGMVTQGPPARSHSELVSGSGERIGEVTS 355 >gi|302680791|ref|XP_003030077.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8] gi|300103768|gb|EFI95174.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8] Length = 392 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 75/275 (27%), Gaps = 69/275 (25%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISKIE 61 L + + G A +LQ + + D+ TL + + L Sbjct: 162 LEGWGLLALQGPEAAGYLQTLTSFDLRTLTFGKSAFVPIDGGFN------LHVARGGYTG 215 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121 ED F + I + + L Sbjct: 216 EDGFEISIPPDQTYDVAQLLSK----------------------------------PDNV 241 Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181 L R LR+ G+ +D T P +A + + G Sbjct: 242 QLTGLGAR---------------DSLRLEAGMCLYGSDL-DETTTPIEAGLGWVIGKERK 285 Query: 182 K-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD---DIEIGTLGVVVG-- 235 K G +IG E V + R+R +I G+ IL IG + + Sbjct: 286 KTGGFIGTEGVLKHIQEGPPRRRVGLIV-EGAPARHGAQILESPTMSEAIGVVTSGIPSP 344 Query: 236 --KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 K +A+ + H +A+ V G KA Sbjct: 345 TLGKNIAMGYVKNGLHKKGTELAVAVRGKARKAVI 379 >gi|163733988|ref|ZP_02141429.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149] gi|161392524|gb|EDQ16852.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149] Length = 975 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T TL R +L G ++ +++ E Sbjct: 640 CDVSTLGKIDIQGPDAGRFLDFVYTNTFSTLKVGCVRYGLMLREDGHVMDDGTTARLAET 699 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 700 HFLMTTTTAAAGPVMRHLEF 719 >gi|330952091|gb|EGH52351.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae Cit 7] Length = 360 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|28572801|ref|NP_789581.1| aminomethyltransferase gcvT [Tropheryma whipplei TW08/27] gi|28410934|emb|CAD67319.1| aminomethyltransferase gcvT [Tropheryma whipplei TW08/27] Length = 356 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 52/216 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAI-----ITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 LS+ + I V G +A + +T + A+ + IL QG I ++ +I Sbjct: 51 LSHMAEIFVSGVNA-----GLELDIALTGHFSDMTCGRAKYTLILNEQGGIEDDLIVYRI 105 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 ++ +++ + R + L S++ E I+ V + + + F Sbjct: 106 DDKNYMVVANAINRKKVFSLLRDRVHTSDIKDETDSISLVAVQGPESESLIRDLFHESGN 165 Query: 116 -----------------------IDERFSIAD-------------VLLHRTWGHNEKIAS 139 I R V + R Sbjct: 166 LRYFSHRCYPHGGTDRSEKLSCSIVARTGYTGEDGFEIFTPNDSVVSIWRALIERGATPC 225 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + + LRI G+ + + + P A ++ Sbjct: 226 GLAARNTLRIEAGMPLYGHEL-RADLNPVQAGLERF 260 >gi|90418125|ref|ZP_01226037.1| dimethylglycine dehydrogenase [Aurantimonas manganoxydans SI85-9A1] gi|90337797|gb|EAS51448.1| dimethylglycine dehydrogenase [Aurantimonas manganoxydans SI85-9A1] Length = 837 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 76/316 (24%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A +L ++ + +LTP G + F + K +++ L Sbjct: 522 VSGPGAAAWLDGLLANRIPK-TPGRVALCHLLTPVGGVRSEFTVYKAGAESYYLV--SGG 578 Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT--- 130 ID +++ + P +G V H R L RT Sbjct: 579 AYEGIDH--------DILQKALPGDGSVAMQPVTHALGVLVVAGPRSREVLAKLTRTDLS 630 Query: 131 -----WGHNEKIASDIKTYHELRI----NHGI----------------VDPNTDF----- 160 W + ++ LR+ G ++ +F Sbjct: 631 NAAFPWLTGQPLSVGPVACTALRVNFVGELGWELHHPIEMQNALYDLLMEAGAEFGIRPF 690 Query: 161 --------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 L ++ ++ + +KG +IG++ V + + Sbjct: 691 GIRAMGAMALEKSYRQIPRELSIEYNAFESGLERF--VHPSKGDFIGRDAVVAARENGLR 748 Query: 201 -RKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIK 252 + + + G D GS P+ D + +G + G LA+A +D Sbjct: 749 WQFATLEVHGVTDADARGSEPVYADGVLVGRVT--NGGFGWRVGKSLALAMLDPAHAGEG 806 Query: 253 KGMALTVHGVRVKASF 268 + + + G R A+ Sbjct: 807 TRLTIRILGTRHDATV 822 >gi|260436058|ref|ZP_05790028.1| glycine cleavage system T protein [Synechococcus sp. WH 8109] gi|260413932|gb|EEX07228.1| glycine cleavage system T protein [Synechococcus sp. WH 8109] Length = 367 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61 S+ +++ G + LQ +I +D+ + A S +L +G I ++ E Sbjct: 51 SHMGVLRLEGANPKDALQRLIPSDLHRIGPGEACYSVLLNERGGIRDDLIVYDCGAIDAE 110 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109 +L I+ + DS + + + + +GV+L+ Sbjct: 111 RGALVLVINAACADSDTAWIREQMEPAGLTLTDIKKDGVLLALQGPEA 158 >gi|229589819|ref|YP_002871938.1| putative aminomethyltransferase [Pseudomonas fluorescens SBW25] gi|229361685|emb|CAY48566.1| putative aminomethyltransferase [Pseudomonas fluorescens SBW25] Length = 376 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 G A LQ T D+ L + +++L GK + ++ + + F++ Sbjct: 63 GPHAESLLQWATTRDIAKLYPGKSVYASMLDEDGKFVDDCIVYRTGPNAFMV 114 >gi|330943299|gb|EGH45684.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. pisi str. 1704B] Length = 360 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|302184895|ref|ZP_07261568.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. syringae 642] Length = 360 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|224006530|ref|XP_002292225.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335] gi|220971867|gb|EED90200.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335] Length = 418 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 89/325 (27%), Gaps = 62/325 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ I+ G+ FL+ I+ D+ L S + G I+ +I+ Sbjct: 85 SLFDVSHMGQIRWRGRDRAAFLEKIVVGDIAGLSEGSGCLSLVTNVNGGIIDDTVITNAG 144 Query: 62 EDTFILEIDRSKRDSLIDK----------------------------------------- 80 D + ++ + + + Sbjct: 145 -DYIYMVVNGATKFGDMKHFKEQMESFDGDVNMEYLEDSMQLLAIQGPGAAEAVSKLLPG 203 Query: 81 ---LLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137 L + V + ++G ++ A + + Sbjct: 204 AFDLTKMAFMTGVDTTLDGVDGCRITRCGYTGEDGFEIAMP-AEHAVSIASKLLSDPSVN 262 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTK---GCYIGQEVVSR 193 + + LR+ G+ D P +A + + G + G ++G E + + Sbjct: 263 PTGLGARDSLRLEAGLCLYGHDL-DENTNPIEATLGWTMGGPKSRRRTEGGFLGAEHILK 321 Query: 194 I--QHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIAR 243 + + + RKR + I G + I + +IG + A+ Sbjct: 322 PDGKFQKVARKR-VGIKGMKAPAREHAEIFDANGETKIGEVTSGTFSPCLKAPIAMGYVE 380 Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268 + + + + + + Sbjct: 381 TELAKAGTEVNVQIRGKMQKAEIVR 405 >gi|206558479|ref|YP_002229239.1| glycine cleavage system aminomethyltransferase T [Burkholderia cenocepacia J2315] gi|238693128|sp|B4EF28|GCST_BURCJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|198034516|emb|CAR50381.1| aminomethyltransferase [Burkholderia cenocepacia J2315] Length = 372 Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|134294274|ref|YP_001118009.1| glycine cleavage system aminomethyltransferase T [Burkholderia vietnamiensis G4] gi|166221543|sp|A4JA71|GCST_BURVG RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|134137431|gb|ABO53174.1| glycine cleavage system T protein [Burkholderia vietnamiensis G4] Length = 372 Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRVRAFFEHALANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|330895731|gb|EGH28020.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. japonica str. M301072PT] Length = 285 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E + Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108 Query: 66 ILEIDRS 72 L ++ + Sbjct: 109 RLVVNAA 115 >gi|326795674|ref|YP_004313494.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas mediterranea MMB-1] gi|326546438|gb|ADZ91658.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas mediterranea MMB-1] Length = 978 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 44/109 (40%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S +++ G A F+ + T L P R + + QG ++ + +I +D Sbjct: 645 IDVSTLGGLEIRGADAAEFINRMYTFAFLKQPVGKTRYAVLTNEQGVVIDDGVSCRIADD 704 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D++ ++ + + + ++I + + N + Sbjct: 705 HFYVTATTSGVDAVFREMTKWNAQWRLDVDIANVTSAYSAVNVAGPLAR 753 >gi|304392639|ref|ZP_07374579.1| dimethylglycine dehydrogenase [Ahrensia sp. R2A130] gi|303295269|gb|EFL89629.1| dimethylglycine dehydrogenase [Ahrensia sp. R2A130] Length = 830 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 80/293 (27%), Gaps = 49/293 (16%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68 + G A +L+ IT + + +G+I+ + + ED F L Sbjct: 522 LKGDGAADWLRQQITGGIPKV--GRLNLGYFADYKGRIVTEMSVIRHGEDDFTLMTAAVA 579 Query: 69 -----------IDRSKRDSLIDKLLFYKL-------RSNVIIEIQPINGVVLSW--NQEH 108 + +L + + + +V+ I + W +Q+ Sbjct: 580 EWHDFEWLKKALPEDGSIALTNHSTEFAVLLVTGPTSRDVLSSIADEADLDAGWLTHQKA 639 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVD 155 + R S A L I + LR+ G Sbjct: 640 KIAGVDCALARVSFAGELGWEIHAAFGDIPALYDAVLGAGAKPFGMFALDSLRLEKGYRT 699 Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLP 214 D + MD + K ++G+ + + + + + M + D Sbjct: 700 WKGDLSTDYTI-LEGGMDRF--VRWQKEDFVGKAAMETEKQQGVKKGFVTMTVDAGDFDA 756 Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 P S I D +G RI+K LT G ++ Sbjct: 757 PYMSTIWNGDQVVGETTSGGWGH-----RINKSIALGVVQSDLTTPGTELEVE 804 >gi|296156315|ref|ZP_06839154.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. Ch1-1] gi|295893821|gb|EFG73600.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. Ch1-1] Length = 1000 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G + + ++ + ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99 + ++ L ++R V+ ++ Q I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ +E T + ++ R S + L W + DI Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAG 928 >gi|170694334|ref|ZP_02885488.1| glycine cleavage system T protein [Burkholderia graminis C4D1M] gi|170140757|gb|EDT08931.1| glycine cleavage system T protein [Burkholderia graminis C4D1M] Length = 372 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P G ++ ++ ED F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVGKLQIPGRALYSCMLNPDGGVIDDLIVYYFGEDHF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|251736945|gb|ACT10334.1| glycine cleavage system T protein [Sinorhizobium fredii] Length = 387 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 85/316 (26%), Gaps = 58/316 (18%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I + G A L+ ++ DVL L R P+G IL +I+ Sbjct: 64 SHMGQIAIRPKSGRIADAALALEKLVPVDVLGLAEGRQRYGLFTNPEGGILDDLMIANRG 123 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------- 106 D L ++ + +D+ L L + + +V Sbjct: 124 -DHLFLVVNAACKDADHAHLK-DGLGDACDVTLLDDRALVALQGPRAEAVLCELWADVAS 181 Query: 107 -------EHTFSNSSFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYH 145 E + + I R R H + +A + Sbjct: 182 MRFMDLAEADLHDVACIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARD 241 Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNII 200 LR+ G+ D T P +A ++ G + G + + Sbjct: 242 SLRLKAGLCLYGNDIDTGTT-PIEAALEWAIQKSRRAGGERAGGFPGADRILAELAGGTD 300 Query: 201 RKRP-------MIITGTDDL-PPSGSPILTDDIEIGTLGVVVG-KKALAIARIDKVDHAI 251 R+R + G L +L + G G V A+ + Sbjct: 301 RRRVGLKPEGRAPVRGGAKLFTDPDGTVLVGSVTSGGFGPSVDCPVAMGYVETAHARNGT 360 Query: 252 KKGMALTVHGVRVKAS 267 K + + + S Sbjct: 361 KLFAEVRGKYLPITVS 376 >gi|85705597|ref|ZP_01036695.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. 217] gi|85670022|gb|EAQ24885.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius sp. 217] Length = 811 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 23/130 (17%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +R+ G + D + P + +D + KG +IG+E + + RK+ Sbjct: 671 DSMRMEKGFMHWKADLITE-FDPFETALDRF--VKPEKGDFIGKEALLKRIEEG-PRKKL 726 Query: 205 MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMA 256 + + P+ G+ ++ D +GT+ G LA A ++ A Sbjct: 727 VTLKVDATNAPAHGGASLMQDGKVVGTITS--GDWGHRVGMNLAYAFVE---------PA 775 Query: 257 LTVHGVRVKA 266 L V G ++ Sbjct: 776 LAVPGTKIDL 785 >gi|296444881|ref|ZP_06886843.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b] gi|296257549|gb|EFH04614.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b] Length = 382 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 39/265 (14%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE--EDTFILEIDR 71 + G+ A L+ ++ AD+ L + R + +L G IL + +++ E+ +L ++ Sbjct: 69 LTGRGAARLLETLVPADLDGLEPQRTRYTQLLAEDGGILDDLMATRLPGREERLLLVVNA 128 Query: 72 SKRD---SLID----KLLFYKL-----------RSNVIIEI---QPINGVVLSWNQEHTF 110 + ++ +L+ +L L R+ + + + W Sbjct: 129 AGKEQDFTLLRQELPQLQLSVLSGRALLALQGPRAAATLSTILPGVEDAPFMGWLPAEYE 188 Query: 111 SNSSFI-------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 S F+ ++ F I A L R + + + + LR+ G+ Sbjct: 189 GASVFVSRSGYTGEDGFEISAPAYLATRLAERLLANEDVAPAGLAARDSLRLEAGLCLYG 248 Query: 158 TDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216 D +T P +A + G +G + G + R+R ++ + Sbjct: 249 HDI-DATTDPVEAGLIWSIGKRRREQGGFPGFARIRAAIDNGPARRRVGLLPQSKAPLRD 307 Query: 217 GSPILT-DDIEIGTLGVVVGKKALA 240 G+ + D +G + +LA Sbjct: 308 GATLTAPDGRIVGRITSGGYSPSLA 332 >gi|298292964|ref|YP_003694903.1| sarcosine oxidase subunit alpha family [Starkeya novella DSM 506] gi|296929475|gb|ADH90284.1| sarcosine oxidase, alpha subunit family [Starkeya novella DSM 506] Length = 1011 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ I T L R +L G ++ ++ ++ ED F Sbjct: 678 STLGKIEVVGPDAAEFMNRIYTNAWAKLEPGRLRYGVMLREDGFVMDDGVVGRLAEDRFH 737 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 738 VTTTTGGAPRVLAHMEDY 755 >gi|239816273|ref|YP_002945183.1| glycine cleavage system T protein [Variovorax paradoxus S110] gi|239802850|gb|ACS19917.1| glycine cleavage system T protein [Variovorax paradoxus S110] Length = 392 Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A + ++ DV+ L R +L +G IL + + Sbjct: 62 SHMGQLRLVGPDAAAAFETLMPVDVIDLAPGKQRYGLLLNDEGGILDDLMFFNEGHGSIF 121 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110 + ++ + + + I + K+ + ++ P + ++ + Sbjct: 122 VIVNGACKVADIAHIQQ-KIGARCDVQPMPDHALLALQGPQAAA 164 >gi|229260087|ref|YP_469748.2| glycine cleavage system aminomethyltransferase T [Rhizobium etli CFN 42] Length = 378 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 52/300 (17%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 + A L++++ D+L L R G IL +I+ + +D + ++ S +D+ Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKDA 129 Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121 + L + L + +I +Q V + + F+D R Sbjct: 130 DLAHLRAHISDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189 Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 A+ + R H + A + LR+ G+ D Sbjct: 190 VSRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249 Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217 +T P +A ++ G + G + R+R + + P G Sbjct: 250 TTS-PVEAALEWAMPKARRAGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307 Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 + + D EIG + V G A+ + + + V S Sbjct: 308 HARLYADAEGQTEIGEVTSGGFGPSVDGPVAMGYVPVSHAAPGTLIYAEVRGKYLPVTIS 367 >gi|218529909|ref|YP_002420725.1| sarcosine oxidase subunit alpha family [Methylobacterium chloromethanicum CM4] gi|218522212|gb|ACK82797.1| sarcosine oxidase, alpha subunit family [Methylobacterium chloromethanicum CM4] Length = 1008 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 20/205 (9%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++ Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------FIDERF----- 120 + ++ L F + +++Q + V W Q + +D F Sbjct: 739 ANAARVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAGPRARDTLRRIVDPGFDLSNE 797 Query: 121 -----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP---HDALM 172 + ADV + +I+ + +EL + D + P Sbjct: 798 AFPFLACADVTVGGIPARLFRISFSGELAYELAVPAAYGDAAWRAIMQAGLPYGITAYGS 857 Query: 173 DLLNGISLTKGCYIGQEVVSRIQHR 197 + L+ + + KG G E+ + R Sbjct: 858 EALSVMRIEKGHAAGAEINGQTTAR 882 >gi|167041907|gb|ABZ06646.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_133I24] Length = 794 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ LS ++ G + +Q +T +V L SA+ G ++ I ++ + Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520 Query: 63 DTF 65 D F Sbjct: 521 DNF 523 >gi|167041609|gb|ABZ06356.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_009A22] Length = 794 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ LS ++ G + +Q +T +V L SA+ G ++ I ++ + Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520 Query: 63 DTF 65 D F Sbjct: 521 DNF 523 >gi|167041157|gb|ABZ05916.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_001B09] Length = 794 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 ++ LS ++ G + +Q +T +V L SA+ G ++ I ++ + Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520 Query: 63 DTF 65 D F Sbjct: 521 DNF 523 >gi|156053183|ref|XP_001592518.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980] gi|154704537|gb|EDO04276.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980 UF-70] Length = 475 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71 + G A FLQ I A + L S +L P G I+ +I+++ + F + + Sbjct: 132 RFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTNA 191 Query: 72 SKRDSLIDKL 81 R+ + L Sbjct: 192 GCREKDLKYL 201 >gi|320659652|gb|EFX27215.1| putative aminomethyltransferase [Escherichia coli O55:H7 str. USDA 5905] Length = 386 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISAAELIAS 119 >gi|320643035|gb|EFX12236.1| putative aminomethyltransferase [Escherichia coli O157:H- str. 493-89] gi|320648492|gb|EFX17147.1| putative aminomethyltransferase [Escherichia coli O157:H- str. H 2687] Length = 386 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISAAELIAS 119 >gi|291282041|ref|YP_003498859.1| putative aminomethyltransferase [Escherichia coli O55:H7 str. CB9615] gi|290761914|gb|ADD55875.1| Putative aminomethyltransferase [Escherichia coli O55:H7 str. CB9615] gi|320637474|gb|EFX07274.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. G5101] gi|320653808|gb|EFX21882.1| putative aminomethyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320664422|gb|EFX31573.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. LSU-61] Length = 386 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISAAELIAS 119 >gi|312195153|ref|YP_004015214.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EuI1c] gi|311226489|gb|ADP79344.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EuI1c] Length = 768 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 81/268 (30%), Gaps = 58/268 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A FLQ + + V P + +L + ++++ F L ++ Sbjct: 461 LAVTGPGAAAFLQRMCSNHVDR-PVGAVTYALLLDEGAGVRGDITVARLGPREFQLGVNS 519 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH----------TFSNSSF----- 115 S + L + ++V + +I V W ++ +F Sbjct: 520 SL---DLAWLRAHA-PADVHVADITGGTCCVGVWGPAARDLLAPLTTLDLAHEAFGYFTA 575 Query: 116 ----IDE------RFSIADVLLHRTWGHNE-----------------KIASDIKTYHELR 148 +D R S L + E +A+ LR Sbjct: 576 RRTHLDAVPVTMLRVSYVGELGWEVYASAELGPRLWDTLWAAGASVGAVAAGRSALTSLR 635 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 + G D P+ A + ++L G ++G R R + +T Sbjct: 636 LEKGYRAWGVDMTAQDD-PYSAGLGF--AVNLAHGDFVG-----RAALRPDGPRALCCLT 687 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234 D +P P+L D + +G + Sbjct: 688 VDDGRTVPAGREPVLADGVPVGHVTSAA 715 >gi|15801036|ref|NP_287052.1| putative aminomethyltransferase [Escherichia coli O157:H7 EDL933] gi|12514416|gb|AAG55663.1|AE005304_8 putative aminomethyltransferase [Escherichia coli O157:H7 str. EDL933] Length = 386 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISAAELIAS 119 >gi|15830542|ref|NP_309315.1| aminomethyltransferase [Escherichia coli O157:H7 str. Sakai] gi|168747334|ref|ZP_02772356.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168754371|ref|ZP_02779378.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168760763|ref|ZP_02785770.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4501] gi|168767548|ref|ZP_02792555.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168773738|ref|ZP_02798745.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4196] gi|168781066|ref|ZP_02806073.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168788788|ref|ZP_02813795.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC869] gi|168799175|ref|ZP_02824182.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC508] gi|195935299|ref|ZP_03080681.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4024] gi|208807412|ref|ZP_03249749.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208815307|ref|ZP_03256486.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208822807|ref|ZP_03263126.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209395879|ref|YP_002269770.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4115] gi|217328553|ref|ZP_03444635.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. TW14588] gi|254792302|ref|YP_003077139.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. TW14359] gi|261227105|ref|ZP_05941386.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261255779|ref|ZP_05948312.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. FRIK966] gi|13360748|dbj|BAB34711.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. Sakai] gi|187770372|gb|EDU34216.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4196] gi|188018140|gb|EDU56262.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4113] gi|189001179|gb|EDU70165.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189358139|gb|EDU76558.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189363108|gb|EDU81527.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189368703|gb|EDU87119.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4501] gi|189371434|gb|EDU89850.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC869] gi|189378233|gb|EDU96649.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC508] gi|208727213|gb|EDZ76814.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208731955|gb|EDZ80643.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208738292|gb|EDZ85975.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209157279|gb|ACI34712.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. EC4115] gi|217318980|gb|EEC27406.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. TW14588] gi|254591702|gb|ACT71063.1| putative aminomethyltransferase [Escherichia coli O157:H7 str. TW14359] gi|320192451|gb|EFW67093.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str. EC1212] gi|326338506|gb|EGD62333.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str. 1125] gi|326345593|gb|EGD69333.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str. 1044] Length = 386 Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISAAELIAS 119 >gi|114769460|ref|ZP_01447086.1| putative aminomethyltransferase protein [alpha proteobacterium HTCC2255] gi|114550377|gb|EAU53258.1| putative aminomethyltransferase protein [alpha proteobacterium HTCC2255] Length = 789 Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G + Q I T ++ TL +A+ G ++ + ++ D F Sbjct: 459 LSPLRKFEITGPDSEALCQYIFTRNMKTLGDGHVVYTAMCYEHGGMIDDGTVFRLGRDNF 518 >gi|319783034|ref|YP_004142510.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168922|gb|ADV12460.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 997 Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIE 61 V +S I V G A FL + T TL AR +L G L ++ Sbjct: 662 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDG--LAFDDGTTWRLG 719 Query: 62 EDTFILEIDRSKRDSLIDKLLFY 84 E F++ + ++ L ++ Sbjct: 720 EQDFLMTTTTANAGKVMQHLEYF 742 >gi|91778508|ref|YP_553716.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia xenovorans LB400] gi|91691168|gb|ABE34366.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia xenovorans LB400] Length = 1000 Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G + L + T L R +L G I + ++ + ++ Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99 + ++ L ++R V+ ++ Q I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ +E T + ++ R S + L W + DI Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ P+D M G+ ++G+ ++R Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P GS I+ Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAG 928 >gi|85374842|ref|YP_458904.1| glycine cleavage system aminomethyltransferase T [Erythrobacter litoralis HTCC2594] gi|84787925|gb|ABC64107.1| glycine cleavage system T protein [Erythrobacter litoralis HTCC2594] Length = 379 Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 47/274 (17%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI---S 58 S +S+ + + G+ A L+A++ + +L R + +L G IL ++ S Sbjct: 56 SLFDVSHMGQLVISGEGATEALEALVPGKLSSLKPGNIRYTLLLNEDGGILDDLMVTNMS 115 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--- 115 + + + F L ++ + + I L + L + + G+V + + + Sbjct: 116 REDVEEFYLVVNGATKWDDIAHLREH-LPDEITMNHLDGRGLVALQGPKAAEALETVFPG 174 Query: 116 IDERFSIADVLLHRTWGH---------------------------NEKIASD-------I 141 + ER G E + +D + Sbjct: 175 VAERLVFMQGTGFEWRGDMIGVARCGYTGEDGFEINISASHIEQLAEALVADDRVRPAGL 234 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRN 198 LR+ G+ D T DL ++ ++ G ++G +++ Sbjct: 235 GARDSLRLEAGLPLYGHDLTVET---DPVSADLTFALTKSRRETGGWMGHGRIAQALMSG 291 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232 KR + G+ + D EIG + Sbjct: 292 PETKRVGLKIEGRMPAREGALVYIGDAEIGRVTS 325 >gi|110667811|ref|YP_657622.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] gi|109625558|emb|CAJ51984.1| aminomethyltransferase, glycin cleavage system T protein [Haloquadratum walsbyi DSM 16790] Length = 474 Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 72/225 (32%), Gaps = 46/225 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A +IT D + + + G IL ++ ++ ED F I Sbjct: 116 IRVKGPDAEALTNYVITRDATEIDPMHGKYVILCNEDGGILNDPILLRVAEDEFWFSISD 175 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING--------------VVLSWNQEHTFSNSSFID 117 S +L+ + + + +E+ I+ V + + ++ Sbjct: 176 S---TLMQWIEGVNVGMDFDVEVDEIDVAPMQIQGPRSEDVMVDVVGEEVSEIPYYGLME 232 Query: 118 ERFSIADVLLHRTWGHNEK---------IASDIKTY------------------HELRIN 150 A+VL+ +T EK + + + + H RI Sbjct: 233 AEIGGAEVLISQTGFSGEKGFEIYVRDAMETAERVWDPVLDSVKDHGGMQIAPGHHRRIA 292 Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 GI+ D T P + + YIG+E + R Q Sbjct: 293 AGILSWGQDMDHETS-PFQVNLGY-QVPDNKQADYIGKEELERQQ 335 >gi|206564226|ref|YP_002234989.1| putative sarcosine oxidase subunit alpha [Burkholderia cenocepacia J2315] gi|198040266|emb|CAR56251.1| putative sarcosine oxidase alpha subunit [Burkholderia cenocepacia J2315] Length = 1003 Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230 RK+ + + D+ + P G+ I+ D ++ + Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQVSAV 935 >gi|89055938|ref|YP_511389.1| sarcosine oxidase alpha subunit family protein [Jannaschia sp. CCS1] gi|88865487|gb|ABD56364.1| sarcosine oxidase alpha subunit family [Jannaschia sp. CCS1] Length = 976 Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 18/208 (8%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 V +S I++ G A FL + T TL AR +L G ++ + + ++ Sbjct: 641 VDVSTLGKIEIFGADAGAFLDFLYTNTFSTLKPGRARYGLMLREDGHVMDDGTTACLADN 700 Query: 64 TFILEIDRSKRDSLIDKLLF--YKLRSNVIIEIQPINGVV----LSWNQEHTFSNSSFID 117 +++ + ++ + F LR ++ + + ++ T N Sbjct: 701 HYVMTTTTAAAGPVMAHMDFASQVLRPDLDVAFTSVTEQWAQFSVAGPHARTLINGVLDQ 760 Query: 118 E----RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH----- 168 F R G ++ I E + D L + Sbjct: 761 PIDGDSFPFMQCGAVRVHGVPGRLFR-ISFSGEHAYEVAVPAAYGDALYRDLVARAEALG 819 Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRI 194 M+ LN + + KG E+ R+ Sbjct: 820 GGAYGMEALNVLRIEKGFITHSEIHGRV 847 >gi|149203546|ref|ZP_01880516.1| aminomethyl transferase family protein [Roseovarius sp. TM1035] gi|149143379|gb|EDM31418.1| aminomethyl transferase family protein [Roseovarius sp. TM1035] Length = 814 Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 60/316 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L + + + G A +L+ +T + + A +G+I+ F +++ED+F Sbjct: 500 LPGFTRLWIEGAGADDWLRGFVTGGLPKVGRMNLVYVA--DKRGRIVTEFSCIRLQEDSF 557 Query: 66 ILEIDR------------------SKRDSLIDK----LLFYKLRSNVI-IEIQPINGVVL 102 +L S R++ ++ L K R + + ++ L Sbjct: 558 VLITASTAQWHDGELVRRALPEGLSLRETTAERDALLLAGPKSREILTGLTDADLSLPWL 617 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRI 149 S +F+ R S L N I + + + LRI Sbjct: 618 SHQHASVAGQKAFL-ARVSFTGELGWEIHAENAAIPAIYEALIGAGVKPFGMFALNSLRI 676 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR----IQHRNIIRKRP- 204 G D + ++ + K QE + + + ++KR Sbjct: 677 EKGYRAWKGDLSTDYSM-LEGGLERF--VKFDK----PQEFTGKAALLAEKQAGVKKRFV 729 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL 257 +I+ P S + + +G V AL + R D + + + Sbjct: 730 TLIVEAKAADAPYMSTLWHEGQIVGETTSGAWGYRVNASVALGMLRADLAVQGTRIEVEI 789 Query: 258 TVH--GVRVKASFPHW 271 V+A P W Sbjct: 790 YGERCAAVVQADAPLW 805 >gi|149374589|ref|ZP_01892363.1| putative aminomethyltransferase protein [Marinobacter algicola DG893] gi|149361292|gb|EDM49742.1| putative aminomethyltransferase protein [Marinobacter algicola DG893] Length = 453 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A F+ +IT D + + + G IL ++ ++ ED F + Sbjct: 112 IQVKGPDAERFVNYVITRDATKIKPMRGKYVILCNEDGGILNDPVLLRVAEDEFWFSLSD 171 Query: 72 SKRD 75 S + Sbjct: 172 SDLE 175 >gi|78064802|ref|YP_367571.1| glycine cleavage system aminomethyltransferase T [Burkholderia sp. 383] gi|123569607|sp|Q39KT9|GCST_BURS3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|77965547|gb|ABB06927.1| Glycine cleavage system T protein [Burkholderia sp. 383] Length = 372 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|145223667|ref|YP_001134345.1| FAD dependent oxidoreductase [Mycobacterium gilvum PYR-GCK] gi|315443993|ref|YP_004076872.1| glycine cleavage system protein T (aminomethyltransferase) [Mycobacterium sp. Spyr1] gi|145216153|gb|ABP45557.1| FAD dependent oxidoreductase [Mycobacterium gilvum PYR-GCK] gi|315262296|gb|ADT99037.1| glycine cleavage system T protein (aminomethyltransferase) [Mycobacterium sp. Spyr1] Length = 816 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 77/269 (28%), Gaps = 62/269 (23%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G A FLQ + T +V + +L G I ++++ + F + + Sbjct: 509 EVSGSGAAAFLQQMTTNNVDK-SVGSVTYTLLLDESGGIRSDLTVARLGPEHFQV---GA 564 Query: 73 KRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQ---------------------- 106 D L R V+ +I + W Sbjct: 565 NSPMDFDWLS----RRKPPGVVVRDITGGTCCLGVWGPRAREVIAPLCPDNLSHKAFAYF 620 Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----DIK------------TYHE 146 + R S L + E A+ D ++ Sbjct: 621 RAMHTHLGAIPVVMMRVSYVGELGWEIYAGAEYGAALWDLIDEAGAAHGIIPAGRIAFNS 680 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE--VVSRIQHRNIIRKRP 204 LRI G TD + P A +D + + KG ++G++ + + + R Sbjct: 681 LRIEKGYRSWGTDMT-AEHRPAAAGLDF--AVRVDKGDFVGRQALLTAGSPDATL---RS 734 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV 233 ++ D P+ D +G + Sbjct: 735 IVFDDPDAAVLGKEPVSVGDTCVGYVTSA 763 >gi|324503980|gb|ADY41718.1| Dimethylglycine dehydrogenase [Ascaris suum] Length = 836 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 92/289 (31%), Gaps = 64/289 (22%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V L+ + I+V G +I L ++T V L S +LT +G IL F I + Sbjct: 503 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 560 Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEI----------------QPINGVV 101 + FIL D + + L V I I + G+ Sbjct: 561 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLAVVGPSSRDVLQGLT 620 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------------------- 141 S + F S R + + RT +++ ++ Sbjct: 621 KSDMSDKGFGQRSTRLLRLNNVPAVAARTSTLTGQLSFELFHDRADTLNLYNTLMREGES 680 Query: 142 --------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193 ++ +R+ HG + T P + + L + L K +IG+ Sbjct: 681 YGITNCGQDAFNIMRLEHGFKLWGRELTLDT-NPFECGLHHL--VDLNKKDFIGKTSAVE 737 Query: 194 IQHRNIIRKRPMIITGTD-------DLPPSGSPIL---TDDIEIGTLGV 232 + + RK ++ + P G+ ++ + IG + Sbjct: 738 LSQKKWNRK-LALLACDTLQEGQDWESIPKGNEVIRRQGAEERIGQITS 785 >gi|255264108|ref|ZP_05343450.1| glycine cleavage system T protein [Thalassiobium sp. R2A62] gi|255106443|gb|EET49117.1| glycine cleavage system T protein [Thalassiobium sp. R2A62] Length = 367 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 59/312 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G L+ I+ +V+ L R G IL +I+ D Sbjct: 53 SHMGQVILRGADPAATLETIVPVNVVGLAEGRQRYGLFTNDAGGILDDLMIANRG-DHLF 111 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122 L ++ + +D+ + + +N+ ++++ I+ +L+ + + + I + + Sbjct: 112 LVVNAACKDADVAHMQ-----ANLTGVDLEVIDRSLLALQGPASEAAFATIAPQVAAMKF 166 Query: 123 ----------ADVLLHR------------------------TWGHNEKIASDIKTYHELR 148 D+ + R ++ + LR Sbjct: 167 MDVGIYPSDYGDLWVSRSGYSGEDGYEISVDNAHATDFACALLALDDVAPIGLGARDSLR 226 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIR 201 + G+ +D T P +A ++ G G + G +V+ R Sbjct: 227 LEAGLCLYGSDLDT-TTTPVEADLNWAIQKIRRTGG--DRAGGFPGADVILPQLENGAAR 283 Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256 KR ++ +G + D +IGT+ ++ +A+A +D A + Sbjct: 284 KRIGLLPEGRAPMRAGVTLHDADGTQIGTVTSGAFGPTIERPMAMAYVDTAHAATGTEIF 343 Query: 257 LTVHGVRVKASF 268 V G + A Sbjct: 344 GNVRGKMLPAVV 355 >gi|326773677|ref|ZP_08232960.1| glycine cleavage system T protein [Actinomyces viscosus C505] gi|326636907|gb|EGE37810.1| glycine cleavage system T protein [Actinomyces viscosus C505] Length = 421 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ +KV G A L A++ A + + AR + I++P G ++ ++ + ++ Sbjct: 59 LSHMGEVKVAGPEAGAALDHALVGA-LSAVAVGRARYTMIVSPSGGVIDDLIVYHVGDEE 117 Query: 65 FILEIDRSKRDSLIDKL 81 +++ + R+ + +L Sbjct: 118 YLVVPNAGNRERVAAEL 134 >gi|84502875|ref|ZP_01000988.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597] gi|84388858|gb|EAQ01728.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597] Length = 370 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + + G++ A F +A++ DV+ L R + G IL + S + F Sbjct: 53 SHMGQVLLRGENPARAF-EALMPVDVVGLKEGRQRYGLLTDDTGGILDDLMFSNRGDHLF 111 Query: 66 ILEIDRSKRDSLI-----------------DKLLFYKLRSNVIIEIQ----------PIN 98 + K D + L R+ ++ + Sbjct: 112 TVVNAACKADDIAHMRAAMPGVEVEEVTDRALLALQGPRAQAVLAALAPEVADMRFMDVR 171 Query: 99 GVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHG 152 V L + + ++ + I A+ L H + + + LR+ G Sbjct: 172 TVALCGAECWVSRSGYTGEDGYEISVPADSAETLARALLDHPDTLPIGLGARDSLRLEAG 231 Query: 153 IVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 + D T P +A + G + G + + + RKR + Sbjct: 232 LCLYGHDIDT-TTTPVEAGLQWAIQKVRRAGGDRAGGFPGADRILKQLAEGAERKRVGLR 290 Query: 208 TGTDDLPPSGSPILTDD---IEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALT 258 G P+ + +GT+ V A+ ID L Sbjct: 291 PQGRAPMREGVPLFAGEAATDPVGTITSGAFGPTVQAPVAMGYLPIDLAAQGTIISAELR 350 Query: 259 VHGVRVKAS 267 V+ + Sbjct: 351 GRRAPVEVA 359 >gi|153803453|ref|ZP_01958039.1| glycine cleavage system T protein [Vibrio cholerae MZO-3] gi|124121003|gb|EAY39746.1| glycine cleavage system T protein [Vibrio cholerae MZO-3] Length = 189 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89 D++ LP R + QG I+ +++ + D + ++ + + I L + L ++ Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137 Query: 90 VIIEIQPINGVVLSWNQEHT 109 V +E+ ++ + Sbjct: 138 VEMEVIEDRALLALQGPKAA 157 >gi|260459679|ref|ZP_05807933.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259034481|gb|EEW35738.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 860 Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 82/292 (28%), Gaps = 54/292 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL-EIDR 71 +V G A FL ++T + + ++ GK++ F I+K ED F++ Sbjct: 495 EVSGPGAEEFLNRLMTNRMPK--TGRIVLTPMINEFGKLIGDFTIAKAGEDRFMIWGSSA 552 Query: 72 SKRDSLI---DKLLFYKLR-SNVIIEIQPINGVVLSWNQEH------------------- 108 +++ + L R S V I V LS Sbjct: 553 AQKYHMRWFEKHLPKDGPRGSEVRIHRFDQTLVGLSIAGPKSRDLLQKLVDVDISTKAFR 612 Query: 109 -------TFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKTY 144 + + R + L + W + ++ Sbjct: 613 FMDFREMAVGGAPCMVNRITYTGDLGYEIWMAPAYERLVYKAIKDAGEEFGLVDFGMRAL 672 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +R+ + P P + MD I L K +IG+E ++ Q +R Sbjct: 673 LSMRLEKNFPTWFRELRP-IYGPFEGSMDRF--IKLEKNDFIGREAAAKEQAEGPKLRRV 729 Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 I D G + + G V R D ++ A Sbjct: 730 SFIVDAADADVMGDEPIWAKVSK-DFGTVEKPHGYGAPRFDDKGKEVRGSKA 780 >gi|255264165|ref|ZP_05343507.1| glycine cleavage T-protein [Thalassiobium sp. R2A62] gi|255106500|gb|EET49174.1| glycine cleavage T-protein [Thalassiobium sp. R2A62] Length = 794 Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 95/294 (32%), Gaps = 58/294 (19%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q I T ++ TLP +A+ G ++ + ++ +D F Sbjct: 463 LSPLRKFEINGPDAEALCQYIFTRNMKTLPIGGVVYTAMCYEHGGMIDDGTVFRLAKDNF 522 Query: 66 ---------------------ILEIDRSKRDSLIDKL-----LFYKLRSNVI------IE 93 + + RS D L + LR + E Sbjct: 523 RWIGGNDYGGEWIREQAEKLGLKVLARSSTDQLHNVAVQGPESRDILR-KITWTAPHNPE 581 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIK-------- 142 + + + + + F+ R L + H +I I Sbjct: 582 FDQLGWFRFTPARLNNEGGTPFVLSRTGYTGELGYEVMCHPKHAPEIFDAIWEAGQGHGL 641 Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 +R+ G++ DF T P +A + + +IG++ + R Sbjct: 642 TPMGLEALDMVRVEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKPDDFIGRDALIR--R 698 Query: 197 RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245 + +++ + + ++ G I +IG + + + +A+ARID Sbjct: 699 KEHPQRKLVGLDIDSNVDVEHGDCIHIGRAQIGEVTSAMRSPLLGRNIAMARID 752 >gi|325961675|ref|YP_004239581.1| glycine cleavage system protein T (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] gi|323467762|gb|ADX71447.1| glycine cleavage system T protein (aminomethyltransferase) [Arthrobacter phenanthrenivorans Sphe3] Length = 835 Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 54/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65 + V G A L + T ++ +L G I ++++ E+ F Sbjct: 517 LSVVGPGAQALLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEDFQLGVNS 575 Query: 66 -----ILEIDRSKRDS--------------------LIDKLLFYKLRSNVIIEIQPINGV 100 L ++ K+ + L L + V + +G+ Sbjct: 576 NVDFDYLRVEARKQSAADPSQWVHVSDITGSTCCIGLWGPLAREVI-GKVSSDDLTNDGL 634 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143 +E + R S L + E IA+ Sbjct: 635 KYFRTKEISVGGIPVTAMRLSYVGELGWELYTTAEYGLKLWDLLFEAGREHGIIAAGRGA 694 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202 ++ +R+ G TD P+++ + ++ K ++G E ++ + + R Sbjct: 695 FNSMRLEKGYRLWGTDMTSEH-HPYESGLGFS--VAKDKAGFVGAEALAERKEQPATRAL 751 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + + P+ +G + Sbjct: 752 RCLTVDDGTSIVLGKEPVYVAGEAVGYVTSAA 783 >gi|237797931|ref|ZP_04586392.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020782|gb|EGI00839.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. oryzae str. 1_6] Length = 360 Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 92/305 (30%), Gaps = 44/305 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G+ A +L+ ++ DV L A S +L G I+ ++ E + Sbjct: 50 SHMNVIDVLGRDARSWLRYLLANDVDRLKTPGRALYSVMLDDAGGIIDDMIVYLTAE-GY 108 Query: 66 ILEIDRSKRDSLIDKLL---------------FYKL-----RSNVIIEIQPINGVVLSWN 105 L ++ + + + L RS I + N Sbjct: 109 RLVVNAANGAKDLAWMKSQLGDAEVQLNERSEMAILAIQGPRSRARIADLVTSSRARLIN 168 Query: 106 QEHTFSNSSFID---ERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149 + F D R E+ S LR+ Sbjct: 169 ELKPFEGRDDADWFIARTGYTGEDGLEIMLPAEQAPSFFNDLVGAGISPIGLGARDTLRL 228 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D P + + ++ +IG++ + R + I K ++ Sbjct: 229 EAGMNLYGQDIGEGVS-PLVSNIAWSIAWEPSERDFIGRKALERERVDGIASKLVGLVLE 287 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + + +I G + K++A+AR+ + A + + + V+ Sbjct: 288 ERGVLRAHQVVRIAEIGEGEITSGSFSPTLSKSIALARV-PMATADRAEVEIRGKWYPVR 346 Query: 266 ASFPH 270 P Sbjct: 347 VVQPA 351 >gi|119504061|ref|ZP_01626142.1| putative oxidoreductase protein [marine gamma proteobacterium HTCC2080] gi|119460064|gb|EAW41158.1| putative oxidoreductase protein [marine gamma proteobacterium HTCC2080] Length = 814 Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G+ A L I +V + + L G I I+++ E+ F Sbjct: 486 LSSFAKFRCEGRDAAGVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544 Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98 ++ L L ++ ++ + P + Sbjct: 545 LVVTAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604 Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141 G + ++E R + L + E + + Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199 + LR+ + D P +A + + I K G +IG+E + R Q + + Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720 Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242 R+ + + + L PI D +G + G L Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770 >gi|86137901|ref|ZP_01056477.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. MED193] gi|85825493|gb|EAQ45692.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. MED193] Length = 981 Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A L + T TL R +L G ++ +++ E Sbjct: 646 CDVSTLGKIDIQGPDAAKLLDFVYTNTFSTLKQGRVRYGLMLREDGFVMDDGTCARLGES 705 Query: 64 TFILEIDRSKRDSLIDKLLF 83 ++L + ++ L F Sbjct: 706 HYVLTTTTAAAGEVMAHLEF 725 >gi|119961253|ref|YP_946778.1| glycine cleavage system aminomethyltransferase T [Arthrobacter aurescens TC1] gi|119948112|gb|ABM07023.1| glycine cleavage system T protein [Arthrobacter aurescens TC1] Length = 377 Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 103/331 (31%), Gaps = 69/331 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + V G A FL + + + A+ S I G I+ + + + F Sbjct: 50 LSHMGEVWVTGPEAAAFLDYALVGKISAMADGKAKYSLICQEDGGIIDDLITYRRGSEKF 109 Query: 66 ILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------N 112 ++ + +L+++ + +V ++ +++ + Sbjct: 110 LVVPNAGNAKVVATALLERAAGF----DVEVQDASAETSLIAVQGPLAEAILLRLVPVEQ 165 Query: 113 SSFIDE-------------RFSIADVLLHRTWGHNEK-----IASDIKT--YHE------ 146 + + E D+LL RT E +A+D + Sbjct: 166 HALVTELKYYAAVEVPFTFDGGTQDLLLARTGYTGEDGFEIFVANDSAAALWQAIAGAAE 225 Query: 147 --------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192 LR+ G+ + P A + + +S +G ++G++ ++ Sbjct: 226 EGELTPAGLASRDSLRLEAGMPLYGNELSREG-NPFAAGLGPVVALS-KEGDFVGKDALA 283 Query: 193 RIQHRNIIR---KRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KALAIA 242 ++ ++ + + G G P+L D +G + ALA Sbjct: 284 ALKADGAGSTSGRKLVGLKGLGRRAGRGHYPVLKDGAVVGEVTSGQPSPTLGYPVALAYV 343 Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 ++ + + L + +YK Sbjct: 344 DVEHSELGTALDIDLRGKSEPFEVVALPFYK 374 >gi|254452855|ref|ZP_05066292.1| aminomethyl transferase family protein [Octadecabacter antarcticus 238] gi|198267261|gb|EDY91531.1| aminomethyl transferase family protein [Octadecabacter antarcticus 238] Length = 382 Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + V GK A + T +V + A +A+L +GK + +I + +T+++ I Sbjct: 62 LHVTGKDAAYVIDRCTTRNVEKIAPGRAVYAAMLNGEGKFIDDCVIYHLAVNTWMVVI 119 >gi|110679087|ref|YP_682094.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh 114] gi|109455203|gb|ABG31408.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh 114] Length = 975 Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T TL R +L G ++ +++ E Sbjct: 640 CDVSTLGKIDIQGPDAGRFLDFVYTNMFSTLNVGRVRYGLMLREDGHVMDDGTTARLAET 699 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 700 HFLMTTTTAAAGPVMRHLEF 719 >gi|87307268|ref|ZP_01089413.1| probable aminotransferase-glycine cleavage system T protein [Blastopirellula marina DSM 3645] gi|87290008|gb|EAQ81897.1| probable aminotransferase-glycine cleavage system T protein [Blastopirellula marina DSM 3645] Length = 367 Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 94/312 (30%), Gaps = 52/312 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63 S+ + + G A FL ++T +P R S + +G IL LI + E Sbjct: 51 SHMARFRFDGAGAGDFLDKLLTRKASVVPMGKIRYSLVCNDEGGILDDVLIYNLGEGDNQ 110 Query: 64 TFILEIDRSKRDSLIDKLLFY-----KLRS--------------NVIIEIQPINGVVLSW 104 F L ++ R + + + + + I +QP+ V +S Sbjct: 111 YFWLVVNAGNRQKIAAWIEQHLPSEGVVFTDHTLETAMIAVQGPKAIAAVQPLCDVPISD 170 Query: 105 -----NQEHTFSNSSFIDER--------------FSIADVLLHRTWGHNEK---IASDIK 142 T + R + A + + + + + Sbjct: 171 LKYYSGALGTLCGEPALISRTGYTGEDGVEVTVPAAAAIAIWDQILNAAQPLGGLPCGLG 230 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202 LR+ + + +I P A + G+S +IG++ + + Sbjct: 231 ARDTLRLEAAMPLYGHEL-SESIDPITAGLTF--GVSFDHD-FIGKDRLEAARDAAPPMV 286 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258 R +P + D ++G + + +A+ +D + + Sbjct: 287 RVGFRCADRRVPREHCTVHIGDQQVGEVTSGTFSPTLNQPIAMGYVDPAIAVSGTAVEID 346 Query: 259 VHGVRVKASFPH 270 + G RV A Sbjct: 347 IRGKRVAAEVAP 358 >gi|75758497|ref|ZP_00738618.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494024|gb|EAO57119.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 347 Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 43/267 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + LS I V G+ + FL ++T D++ + + + +L G ++ + K E+ Sbjct: 25 IDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEEETTLFTLLLKEDGTVIDIINLFKNEDS 84 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-----LSWNQEHTF-------- 110 ++ K+D+++ L K II+I + ++ +W F Sbjct: 85 ITVITTPH-KKDTVLAWLENQKTNGIEIIDISQTHSLLGFEGPYAWRLAQQFLDFEISSL 143 Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---------------------KIASDIK----TYH 145 SF+ + ++LL RT E DI + Sbjct: 144 PFQSFVLNQLFGKEILLARTGVTAEYGYQLLFEKYLEPIVFETINSFKDDDINLKKVDWE 203 Query: 146 ELR-INHGIVDPNTDFLP-STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 L + I P +F + +A ++ I K + G++ + + + ++ Sbjct: 204 TLETLMLEIRHPYFEFKHLEELNIFEASLEWF--IDFYKDEFYGRDSLEQQSEAGVNKRI 261 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTL 230 TG + I ++ IG + Sbjct: 262 VGFTTGIESQITVNDEIFIEEQLIGKV 288 >gi|300024300|ref|YP_003756911.1| glycine cleavage system protein T [Hyphomicrobium denitrificans ATCC 51888] gi|299526121|gb|ADJ24590.1| glycine cleavage system T protein [Hyphomicrobium denitrificans ATCC 51888] Length = 382 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 91/293 (31%), Gaps = 51/293 (17%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE----DTFILEIDRSKRDSLI 78 L+A++ AD++ L R S +L G ++ ++++ EE IL ++ S++D I Sbjct: 81 LEALVPADIVELVPGQQRYSQLLNASGGVIDDLMVTRPEESDESGRLILVLNASRKDIDI 140 Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-IDER------------------ 119 + + +L IE P ++ + D R Sbjct: 141 EHIAR-QLCEGTRIESCPDLALLALQGPKSGDVLEPICPDSRKLAFMQATRTQIAGCDCF 199 Query: 120 -----------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162 S A L ++E + LR+ G+ + Sbjct: 200 VSRSGYTGEDGFEISVGASDAVTLWRALLANDEVRPCGLGARDSLRLEAGLCLYGHEL-D 258 Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222 TI P +A + G + G E + + R R + G+ IL+ Sbjct: 259 ETISPVEAGLTWSIPKRRRTGGFPGAERILGEISASPARTRVGLHFIGRAPAREGAKILS 318 Query: 223 D-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 EIG + ALA + + + V G + A Sbjct: 319 KMGDEIGVVTSGGYSPTLKQPIALAYVPPEYASA--DTPLTVIVRGEPLDAKV 369 >gi|225718822|gb|ACO15257.1| Aminomethyltransferase, mitochondrial precursor [Caligus clemensi] Length = 268 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 9/102 (8%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V GK + F+ ++ T D L + +G I+ ++ E L + Sbjct: 79 RVMGKDRMKFIGSLTTLDGEALGDNSGSLTIFTNERGGIIDDLIVMNTGEGYLFLVTNAG 138 Query: 73 KRD---SLID----KLLFYKLRSNVIIEIQPINGVVLSWNQE 107 +D L+ L L +V +E+ +G++ + Sbjct: 139 CKDKDIPLMKTKAETLKKNGL--DVELELIDDHGLIAIQGPQ 178 >gi|170061082|ref|XP_001866082.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus] gi|167879333|gb|EDS42716.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus] Length = 413 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK I +++ TADV L + +G IL +++++ +DT + + S+ Sbjct: 91 LRGKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVSDDTLYVVSNASR 150 Query: 74 RDS 76 +++ Sbjct: 151 KET 153 >gi|92117170|ref|YP_576899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter hamburgensis X14] gi|91800064|gb|ABE62439.1| glycine cleavage system T protein [Nitrobacter hamburgensis X14] Length = 387 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 75/262 (28%), Gaps = 49/262 (18%) Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77 A L+ ++ D++ + R + G +L +++ D L ++ + + + Sbjct: 76 DAALALERLVPQDIVAVAPGRQRYALFTNAAGGLLDDLMVANFG-DHLFLVVNGACKAAD 134 Query: 78 IDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----------- 118 L + L ++ +Q + F+D Sbjct: 135 EAHLREHLSDVCTIEVLADRALVALQGPKAASVLAKACPEAPAMRFMDAGPHQVRIAGGA 194 Query: 119 --------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158 + A+ L+ + + + LR+ G+ Sbjct: 195 IACFVSRSGYTGEDGFEISIPAAQAEALVSGLLDDPDVMPVGLGARDSLRLEAGLCLYGH 254 Query: 159 DFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213 D +T P +A ++ G + G V+ + R+R + Sbjct: 255 DI-DATTTPVEAALEWSVQKSRRSGGARAGGFPGANVILPQFEQGASRRRVGLRPEGRAP 313 Query: 214 PPSGSPILTD---DIEIGTLGV 232 G+P+ D IGT+ Sbjct: 314 VREGAPLFADASSSDPIGTVTS 335 >gi|218460207|ref|ZP_03500298.1| sarcosine oxidase, alpha subunit family protein [Rhizobium etli Kim 5] Length = 468 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 18/199 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL I L AR +L G I S+ + Sbjct: 195 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 254 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 + F + + ++ L F +++ P + +L+ + Sbjct: 255 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 314 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 S+++F + R G +I+ + +EL + G + D + ++ Sbjct: 315 EDISDAAFPFMSARKVSLFGGRLEGRLFRISFSGERAYELAVPAGYGESVADAIMASGEK 374 Query: 168 H---DALMDLLNGISLTKG 183 H + L + + KG Sbjct: 375 HGICAYGAEALGVLRIEKG 393 >gi|167587896|ref|ZP_02380284.1| glycine cleavage system aminomethyltransferase T [Burkholderia ubonensis Bu] Length = 372 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + + +V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAVANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|84515376|ref|ZP_01002738.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis SKA53] gi|84510659|gb|EAQ07114.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis SKA53] Length = 965 Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A P L + T + TL R +L G ++ +++ D Sbjct: 630 CDVSTLGKIDVQGPDAAPLLDFVYTNRMSTLKVGRVRYGLMLREDGFVMDDGTAARLGPD 689 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 690 HFVITTTTAAAGQVMRHLEF 709 >gi|163851079|ref|YP_001639122.1| sarcosine oxidase alpha subunit family protein [Methylobacterium extorquens PA1] gi|163662684|gb|ABY30051.1| sarcosine oxidase, alpha subunit family [Methylobacterium extorquens PA1] Length = 1009 Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 49/241 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++ Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 + ++ L F + +++Q + V W Q A L R Sbjct: 739 ANAPRVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAG---------PRARDTLRR-- 786 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQE 189 IVDP D + FP A D+ GI Sbjct: 787 ---------------------IVDPGFDL-SNEAFPFLACADVTVGGGIPAR-------- 816 Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249 + RI + + D ++ + G G +AL++ RI+K Sbjct: 817 -LFRISFSGEVAYELAVPAAYGDAAWRA--VMQAGLPYG--ITAYGSEALSVMRIEKGHA 871 Query: 250 A 250 A Sbjct: 872 A 872 >gi|163744119|ref|ZP_02151484.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] gi|161382617|gb|EDQ07021.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis 2.10] Length = 815 Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 96/314 (30%), Gaps = 56/314 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S + G+ A FL+ ++T + + + +G+IL + ED F Sbjct: 501 LPGFSRFNLSGEGAAEFLRGLVTGGLPKVGRMNLVYVS--DDRGRILTEMSCIRHGEDHF 558 Query: 66 ILEIDRSKR---DSLIDKLLFYKLRSN----------VI----------IEIQPINGVVL 102 + S + ++ K L LR V I ++ L Sbjct: 559 TMITAGSAQWHDFEILKKALPAGLRLTDHTTEFATMIVTGPQSRDLFAGISDADLSLGWL 618 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRI 149 + + +F+ R S A L NE + LRI Sbjct: 619 THQEATVAGKPAFL-ARVSYAGELGWEVHCANEHQPAIYDALLAGGAKPFGMYALNSLRI 677 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MII 207 G D + ++ + L K + G+ + + + + + +I+ Sbjct: 678 EKGYRTWKGDLSTDYSL-LEGGLERF--VKLDKPQDFPGKAAIQSEKQQGVKKSIVTLIV 734 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261 D P S I D +G V AL + R D + + + ++G Sbjct: 735 EAGDADAPYMSCIWKDGEIVGETTSGDWGYRVNASIALGMVRSDAAVPGTE--LEVEIYG 792 Query: 262 VRVKAS----FPHW 271 + +A P W Sbjct: 793 EKCRAVVQEDKPLW 806 >gi|83952529|ref|ZP_00961260.1| dimethylglycine dehydrogenase [Roseovarius nubinhibens ISM] gi|83836202|gb|EAP75500.1| dimethylglycine dehydrogenase [Roseovarius nubinhibens ISM] Length = 792 Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 10/174 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 LS S ++ G PFL+ + LTP G +L F ++++ ED Sbjct: 484 ADLSVFSKFEITGADLAPFLETLGAN--RAPDLGRIGLCHGLTPAGGVLSEFTVTRLAED 541 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWNQEHTFSNSSFID-E 118 L + + +D L +LR+ V I + V+ + + D Sbjct: 542 HAYLTSAAAAEEIDLDLL---RLRAKGMDVEIRNVTDDLAVIAVMGPKAPETCPELADMP 598 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172 S + L +++ + EL + G + L PH Sbjct: 599 WLSARETTLDGIAIRALRLSYIGECGWELHVARGAATTLFEALERRATPHGLGF 652 >gi|126740661|ref|ZP_01756347.1| probable glycine cleavage system T protein [Roseobacter sp. SK209-2-6] gi|126718176|gb|EBA14892.1| probable glycine cleavage system T protein [Roseobacter sp. SK209-2-6] Length = 815 Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 51/272 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ + + G A L I DV P + +L +G I + ++ D F Sbjct: 489 TSFAKFSLKGPDAQAVLNWICANDVAK-PIGSLIYTQMLNDKGGIECDLTVGRVAHDEFY 547 Query: 67 LEIDRSKRDSLIDKLLF--------------------------------YKLRSNVI--- 91 + D + R +V Sbjct: 548 IVTGTGYATHDFDWIRRNIPAGLNCQLFDITSSNAVLSLMGPKAREILSVVTRDDVSNEG 607 Query: 92 ----------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141 I P+ + +++ E + ++ ++ D L+H + + Sbjct: 608 FEFGTIRTIGIAGCPVQALRVTYVGELGWELHLPVEYAQTVYDALMH-AGRPLGLVNAGY 666 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 + LR+ G + P P +A + + L + + + N ++ Sbjct: 667 RAIESLRLEKGYRAWGAEIGPDHS-PFEAGLGW--AVKLKQATPFKGRAAAELHKTNGVK 723 Query: 202 KRPMIITGTDDLPPSG-SPILTDDIEIGTLGV 232 K T ++ G I + +G L Sbjct: 724 KMMAGFTVEPEVVLLGRETIYRNGKRVGWLTS 755 >gi|330898045|gb|EGH29464.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 485 Score = 40.2 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 157 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGLVIDDGVCARFAEQ 216 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------NSS 114 F + S D + ++L + + + ++I + + + N +S + Sbjct: 217 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPYSRKVLEQVCTDLD 276 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 F V L G ++ + H LR+ +V+ F Sbjct: 277 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGEPGYEIHVPARHALRLWDALVEAGKAFDMR 336 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ R + Sbjct: 337 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEARPLK 396 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 397 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 456 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 457 PIRVE-DGVVVQATV 470 >gi|134292174|ref|YP_001115910.1| sarcosine oxidase alpha subunit family protein [Burkholderia vietnamiensis G4] gi|134135331|gb|ABO56445.1| sarcosine oxidase, alpha subunit family [Burkholderia vietnamiensis G4] Length = 1003 Score = 40.2 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 F N +F + R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRADTS 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + DD + P G+ I+ D ++ Sbjct: 901 KEGRKQFVGLLTADDQLVLPEGAQIIAKDTQV 932 >gi|332704196|ref|ZP_08424284.1| glycine cleavage system T protein [Desulfovibrio africanus str. Walvis Bay] gi|332554345|gb|EGJ51389.1| glycine cleavage system T protein [Desulfovibrio africanus str. Walvis Bay] Length = 361 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----I 69 + G+ A L ++T ++ TL R +L G +L +I + +D ++L Sbjct: 59 LRGQGAAKALSQVVTHNLDTLQPGKCRYGFMLNEHGGVLDDLIIYCLAQDEYMLVVNGAC 118 Query: 70 DRSKRDSLIDKL 81 +RS + + L Sbjct: 119 ERSDFEWIKSHL 130 >gi|299067070|emb|CBJ38266.1| sarcosine oxidase (Alpha subunit) oxidoreductase protein [Ralstonia solanacearum CMR15] Length = 1003 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWGKLDVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSFIDERFSIADVLLHR------------TWGHNEKIASDIKTYHE----------- 146 F N +F + V R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGARARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D +I P+D M L ++ TK C +G+ ++R Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGMGGL--VAKTKDC-LGKRSLARSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + D + P G+ I+ D ++ Sbjct: 901 KAGRKQFVGLLTDDAQCVLPEGAQIIAPDTQV 932 >gi|289706043|ref|ZP_06502416.1| aminomethyltransferase [Micrococcus luteus SK58] gi|289557245|gb|EFD50563.1| aminomethyltransferase [Micrococcus luteus SK58] Length = 388 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 22/146 (15%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I+V G A L A+ + + TL A+ + LT G IL ++ ++++ Sbjct: 52 LSHMGEIRVTGPEAGAMLDHALSSV-LSTLKPGRAKYALCLTDAGTILDDTIVYRMDDGE 110 Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +++ + ++ L + VV E S ++ + Sbjct: 111 AGSEPDYLVVPNAGNIAAVHTALNQ---------RASGWDAVV-----EDESSTTALVAV 156 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY 144 + A+ +L R +++K Y Sbjct: 157 QGPQAERILARAMPEAAAQLAELKYY 182 >gi|237839583|ref|XP_002369089.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii ME49] gi|211966753|gb|EEB01949.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii ME49] Length = 866 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ + Sbjct: 498 SLFDLAYRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 556 Query: 62 EDTFILEIDRSKRDSLIDKL 81 D ++ + + ++ +L Sbjct: 557 RDFLLIIGNACNKSKILSRL 576 >gi|126733206|ref|ZP_01748953.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. CCS2] gi|126716072|gb|EBA12936.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. CCS2] Length = 968 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 7/123 (5%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A L + T T+ R +L G ++ +++ E Sbjct: 633 CDVSTLGKIDIQGPDAAALLDFVYTNMFSTVKVGRVRYGLMLREDGHVMDDGTTARLGEQ 692 Query: 64 TFILEIDRSKRDSLIDKLLF--YKLR----SNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 F++ + ++ L F LR + V I I + ++ +D Sbjct: 693 HFVMTTTTAAAGLVMRHLEFVLQVLRPDLDAKV-ISITEQWAQFAVAGPQARALLNTVLD 751 Query: 118 ERF 120 + Sbjct: 752 QEL 754 >gi|126727814|ref|ZP_01743644.1| probable aminomethyltransferase protein [Rhodobacterales bacterium HTCC2150] gi|126702941|gb|EBA02044.1| probable aminomethyltransferase protein [Rhodobacterales bacterium HTCC2150] Length = 794 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS ++ G A Q I T ++ TLP + + G ++ + ++ +D F Sbjct: 463 LSPLRKFEITGPDAEALCQYIFTRNMKTLPIGGVVYTTMCYEHGGMIDDGTVFRLAKDNF 522 >gi|330819791|ref|YP_004348653.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia gladioli BSR3] gi|327371786|gb|AEA63141.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia gladioli BSR3] Length = 1003 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 87/281 (30%), Gaps = 57/281 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G ++ L + T L AR +L G + + ++ E ++ Sbjct: 666 STLGKIDIQGPDSVKLLNWMYTNPWGKLEVGRARYGLMLDENGMVFDDGVTVRLGEQHYM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99 + ++ + K+R V+ ++ Q I+ Sbjct: 726 MTTTTGGAARVLTWMERWLQTEWPDMKVRLSSVTDHWATFAVVGPNSRKVVQKVCQDIDF 785 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ ++ T + + R S + L W + DI Sbjct: 786 ANAAFPFMSYRDGTVAGARARVMRISFSGELAYEVNVPANAGRAVWEAIMAAGAEFDITP 845 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D +I PHD M L S ++G+ +SR Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMSGLVAKSKD---FLGRRSLSRSDTTK 901 Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239 RK+ + + D + +L + +I + L Sbjct: 902 SNRKQFVGLLTDDP-----ATVLEEGGQIVEPNAAANAEGL 937 >gi|160872687|ref|ZP_02062819.1| glycine cleavage system T protein [Rickettsiella grylli] gi|159121486|gb|EDP46824.1| glycine cleavage system T protein [Rickettsiella grylli] Length = 362 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 101/308 (32%), Gaps = 43/308 (13%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ + + G++A+P+L + + L A + +L G +L ++ ++ E + Sbjct: 50 SHMLAVDIIGQAALPYLSFLFANNPQRLIPGKALYTCMLNDAGGVLDDLIVYQLSEHIYR 109 Query: 67 LEIDRSKRDSLIDKLLFYKL---------RSN-VIIEIQPINGV--------------VL 102 + I+ + R S +D + R++ II IQ + + + Sbjct: 110 IVINAANRHSDLDWMKKQAQNFPTISIVERTDLAIIAIQGPHAITKTLQAFNAHQQSLIS 169 Query: 103 SWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRI 149 + H ++ + R + + LR+ Sbjct: 170 ALKPFHCLHDNHWFIARTGYTGEDGLEVILPLHEAENFWQRLIELGSKPCGLGARDTLRL 229 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ +D T P ++ + +IG++ +++ + + +++ Sbjct: 230 EAGLNLQGSDM-DITTTPLESNLAWTVAWDPIDRSFIGRQALNQQKENLTRKLVGLVLEE 288 Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265 + + I+T E G + ++A+ RI H + + + Sbjct: 289 KGRILRNHQKIITPKGE-GEITSGSYSPTLGTSIALGRIPYAHHEDYCDVIMGTKQYTAR 347 Query: 266 ASFPHWYK 273 P + + Sbjct: 348 IVKPPFIR 355 >gi|330981689|gb|EGH79792.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 448 Score = 40.2 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 102/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 120 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 179 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 180 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 239 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 F V L G ++ + H LR+ +V+ F Sbjct: 240 LSGAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 299 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ R Sbjct: 300 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEARPQK 359 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 360 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 419 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 420 PIRVE-DGVVVQATV 433 >gi|319781544|ref|YP_004141020.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167432|gb|ADV10970.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 998 Score = 40.2 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 94/326 (28%), Gaps = 73/326 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F++ + T L R +L G I ++ ++ D F Sbjct: 665 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 724 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFI-- 116 + +++ + Y I V+ + + + Sbjct: 725 VTTTTGGAPRVMNHMEDY---LQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEG 781 Query: 117 ----DERFSIADVL----------------------------------LHRTWGHNEKIA 138 DE V W +K Sbjct: 782 IDMSDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHG 841 Query: 139 SDI---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + + H LR G + D T+ P+DA +D + K ++G ++R Sbjct: 842 AAAYGTEAMHVLRAEKGYIIVGQD-TDGTVTPNDAGLDW--AVGKKKTDFVGIRGMARPD 898 Query: 196 HRNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAI 241 RK+ + + D + G+ I+ D + IG + + ALA+ Sbjct: 899 LVAKGRKQLVGLKTKDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSENCGRSIALAL 958 Query: 242 A--RIDKVDHAIKKGMALTVHGVRVK 265 D++ + M V V V Sbjct: 959 VAGGRDRIGETLYVPMPNGVIEVEVT 984 >gi|307546036|ref|YP_003898515.1| sarcosine oxidase subunit alpha [Halomonas elongata DSM 2581] gi|307218060|emb|CBV43330.1| sarcosine oxidase, alpha subunit [Halomonas elongata DSM 2581] Length = 1012 Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L R + G ++ S + E+ F+ Sbjct: 678 STLGKIDIQGPDAREFLGRVYTNKWAKLAPGRVRYGLMCKDDGMVMDDGTTSCLAENHFL 737 Query: 67 LEIDRSKRDSLIDKL 81 + ++++ L Sbjct: 738 MTTSTGGAATVLEWL 752 >gi|86360700|ref|YP_472588.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42] gi|86284802|gb|ABC93861.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42] Length = 984 Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 63/302 (20%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL + L AR +L G I S+ + Sbjct: 645 LCDVSTLGKIEIFGRDAATFLDRVYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 704 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 + F + + ++ L F +++ P + +L+ + Sbjct: 705 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 764 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160 S+++F + R G +I+ + +EL + G + D Sbjct: 765 EDISDAAFPFMSAREISLFGGRLEGRLFRISFSGERAYELAVPAGYGESVADAIMAAGEK 824 Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + T+ P D + +S TK +IG+ +++R Sbjct: 825 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSTTKLDFIGKAMLAREG 882 Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241 ++ R R + + + +GS IL + G + K LA+ Sbjct: 883 LQDPERPRLVGVMPLNPASSFRTGSHILAEGAAATLENDQGYVTSSAFSPTLGHKIGLAL 942 Query: 242 AR 243 R Sbjct: 943 VR 944 >gi|163758120|ref|ZP_02165208.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43] gi|162284409|gb|EDQ34692.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43] Length = 379 Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 85/288 (29%), Gaps = 56/288 (19%) Query: 11 FIKV-CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 I+ G A L+AI DVL L R +G + F+++ + +++ Sbjct: 62 LIRARSGDVTDAARALEAITPVDVLGLKPGRQRYGLFTNDKGGLEDDFMVANRGDHLYLV 121 Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTF------ 110 K + L + L + IE Q V+ S+ + Sbjct: 122 VNAACKHEDLAR--IRTALSDSCEIEAQFGRGLIALQGPVAEAVLASYAPDAEDMLFMDV 179 Query: 111 -----SNSSFIDERFSIAD-------------VLLHRTWGHNEKIAS-DIKTYHELRINH 151 + + R + + R ++++ + + LR+ Sbjct: 180 ADLKIGGTPVVVSRSGYSGEDGFEISIPADETERVARLLLADDRVEAIGLGARDSLRLEA 239 Query: 152 GIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 G+ D T P +A + +G + G +V+ R R + Sbjct: 240 GLCLYGNDI-DETTTPVEANLKWAIQKARRAGGEREGGFPGADVILNQFDTGPARLRVGL 298 Query: 207 ITGTDDLPPSGSPIL---TDDIEIGTLG------VVVGKKALAIARID 245 +G+ + + IGT+ V G A+ D Sbjct: 299 QPSGKAPVRAGAELYDSESGGAAIGTVTSGGFGPSVGGPVAMGYVPAD 346 >gi|66045462|ref|YP_235303.1| aminomethyltransferase [Pseudomonas syringae pv. syringae B728a] gi|63256169|gb|AAY37265.1| Aminomethyltransferase [Pseudomonas syringae pv. syringae B728a] Length = 968 Score = 40.2 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 E F V L G ++ + H LR+ +V+ F Sbjct: 760 LSAEAFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ + Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLDMIIGMAYAAFDQSTPGQQI 939 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 940 PIRVE-DGVVVQATV 953 >gi|16182554|gb|AAL13520.1| GH04419p [Drosophila melanogaster] Length = 329 Score = 40.2 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 5 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 64 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 65 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 122 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 SSF+ I +V + R E + + Sbjct: 123 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 182 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D S P +A + L ++ + + G +V+ + Sbjct: 183 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 239 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I + ++G + Sbjct: 240 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 275 >gi|307731435|ref|YP_003908659.1| glycine cleavage system T protein [Burkholderia sp. CCGE1003] gi|307585970|gb|ADN59368.1| glycine cleavage system T protein [Burkholderia sp. CCGE1003] Length = 372 Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ F + + +V L A S +L P+G ++ ++ E F Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPEGGVIDDLIVYYFGEQHF 111 Query: 66 ILEIDRSKRD 75 + ++ D Sbjct: 112 RVVVNAGTAD 121 >gi|87122243|ref|ZP_01078126.1| sarcosine oxidase, alpha subunit [Marinomonas sp. MED121] gi|86162563|gb|EAQ63845.1| sarcosine oxidase, alpha subunit [Marinomonas sp. MED121] Length = 1005 Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 30/77 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + GK A FL + T L R +L G I+ + S I +D FI Sbjct: 670 STLGKIDIQGKDAREFLNRVYTNAWSKLAVGKCRYGLMLKEDGMIMDDGVTSCIADDHFI 729 Query: 67 LEIDRSKRDSLIDKLLF 83 L ++++ L Sbjct: 730 LTTTTGGAANVLEWLEL 746 >gi|297180189|gb|ADI16410.1| uncharacterized nad(fad)-dependent dehydrogenases [uncultured bacterium HF770_09N20] Length = 994 Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 19/211 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +++ I V G A FL + T LP AR +L G ++ ++ E Sbjct: 656 LCDVTSLGKIAVQGPGATEFLNRVYTNPFAKLPIGKARYGIMLRDDGLVMDDGTTWRLSE 715 Query: 63 DTFILEIDRSKRDSLIDKL-LFYKLRS---NVIIEIQPINGVVLSWN--------QEHTF 110 + + + ++ L + R V + ++ + + Sbjct: 716 TDYFMTTTTAHAAKVMVWLEELLQTRWPDLKVHVTSVSEQWTGIAVAGPKSREVLEANVT 775 Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD----PNTDFLPSTIF 166 S +E F V+ G + I EL + P D L +++ Sbjct: 776 HPSEVSNEVFPFMGVIETILKGDIPCRIARISFSGELAYEVYVPADFGPPAMDRLWASVK 835 Query: 167 PHD---ALMDLLNGISLTKGCYIGQEVVSRI 194 + ++ L + + KG G E+ R+ Sbjct: 836 AMEGCLYGLEALGAMRIEKGHVTGAELDGRV 866 >gi|254501203|ref|ZP_05113354.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] gi|222437274|gb|EEE43953.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia alexandrii DFL-11] Length = 966 Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S+ I V G A FL + + L AR +L G ++ ++ + Sbjct: 629 CDVSSLGKIAVQGPDAAEFLNRVYSNGFAKLSVGKARYGIMLRDDGMVMDDGTTWRLADT 688 Query: 64 TFI 66 F+ Sbjct: 689 EFL 691 >gi|170579599|ref|XP_001894901.1| dimethylglycine dehydrogenase, mitochondrial precursor, putative [Brugia malayi] gi|158598353|gb|EDP36265.1| dimethylglycine dehydrogenase, mitochondrial precursor, putative [Brugia malayi] Length = 836 Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 50/258 (19%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62 + LS + I+V GK + L ++ + L +LT +G I + ++ Sbjct: 497 IDLSWRGKIEVRGKDSEKLLSYVLANEPPQL--GEVSSGLMLTKKGNIFGSLDLFHHDQY 554 Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTFS 111 FIL D + ++ L + +EI ++ + S +E T S Sbjct: 555 RSEFILLTDPERESRELNWLKRAAIEMEANVEISGVSEYLASLAIVGPKSREVLEELTKS 614 Query: 112 NSSFIDE-----RFSIADVLLHRTWGHNEKIASDI------------------------- 141 + F R A V+ RT +++ ++ Sbjct: 615 DLGFKQNAARLMRLGSAPVIAVRTTDATGQLSYELYHSRGDTLGLYNSLMEVGKNYGIVN 674 Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 T + +RI +G + +T P++ + + + L K +IG+ + + Sbjct: 675 FGQSTLNMMRIENGYKIWGRELTLNT-NPYECGLSQM--VDLNKENFIGKTSCMELSQKQ 731 Query: 199 IIRKRPMIITGTDDLPPS 216 RK+ ++I P S Sbjct: 732 WNRKQVLLICEPLTEPQS 749 >gi|90418778|ref|ZP_01226689.1| sarcosine oxidase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90336858|gb|EAS50563.1| sarcosine oxidase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 993 Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 103/324 (31%), Gaps = 63/324 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S +++ G A FL + + L R + +L G I+ ++++I E+ F Sbjct: 660 STLGKVELVGPDAGAFLDLMYATPLSRLAVGKCRYALMLNEAGFIIDDGIVARIAENRFH 719 Query: 67 LEIDRSKRDSLIDKLLFYKLR-----SNVIIEIQPINGVVLSWN---------------- 105 + +++ + Y+ + I V+ Sbjct: 720 VTTTTGGAPRVLNLMEDYRQTEFPEMAVWTSSISEQWAVIAVQGPRARDLIAPFVEGLGI 779 Query: 106 QEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDI--KTYHELR---INHGIVD 155 F++ S + RF L R G + SD + LR + G+ Sbjct: 780 GPDAFAHMSVAECRFMGLPCRLFRVSFTGELGFEVNVPSDYGRSVWDTLRERGRSLGVEP 839 Query: 156 PNTDF----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 TD T+ P DA M +S K ++G+ + R Sbjct: 840 YGTDAMHVLRAEKGYIIVGQETDGTVTPADAGMAW--AVSRKKADFVGKRGLERPDLSAP 897 Query: 200 IRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKK------ALAIARID 245 RK+ + + + L G+ ++ D + +G + + ALA+ + Sbjct: 898 GRKQLVGLKTANPLTVLEEGAQLVADPNQRVPMTMLGHVTSAYRSQTLGRSIALAMVKDG 957 Query: 246 KVDHAIKKGMALTVHGVRVKASFP 269 + + + + V+ + P Sbjct: 958 RKLVGQTLYVPMPTETIAVEVTEP 981 >gi|164656126|ref|XP_001729191.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966] gi|159103081|gb|EDP41977.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966] Length = 373 Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180 + + + E + + LR+ G+ D ++ P + + G Sbjct: 207 EATETVTQAILDNPEVQLAGLAARDSLRLEAGMCLYGHDL-DESVSPVEGALAWTVGKDR 265 Query: 181 T-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE--IGTLGVVV--- 234 G ++G E V R R+R ++ G+ + T D + IG + + Sbjct: 266 RVTGDFLGAERVLRELKEGPPRRRVGLLVSPGSPAREGTKVFTPDGKTHIGRITSGIPSP 325 Query: 235 ---GKKALAIA 242 A+A+ Sbjct: 326 TLGQNIAMALV 336 >gi|255291998|dbj|BAH90482.1| hypothetical protein [uncultured bacterium] Length = 390 Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G A FLQ + A+ +P G ++ ++ +E F++ Sbjct: 78 LHVRGADAEAFLQFLSVNTFRNFGVGAAKQLLACSPDGFVIGDAILYHLEPAHFLV 133 >gi|227823426|ref|YP_002827399.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234] gi|227342428|gb|ACP26646.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234] Length = 997 Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 79/267 (29%), Gaps = 53/267 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL + T L R +L G + ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAQFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQE--------------- 107 + ++ + Y V + V++ Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIAPLVEGIDL 783 Query: 108 --HTFSNSSFIDERFSIADVLLHR------------------------TWGHNEKIAS-- 139 F + S + R L R W E + + Sbjct: 784 SNEAFPHMSVAEGRICGVPTRLFRMSFTGELGFEVNVPADYGQAVWEAIWARAEPMGACA 843 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ PHDA + +S K ++G + R Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPHDAALSW--AVSKKKPDFVGIRGLKRPDLVK 900 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + G+ I+ D Sbjct: 901 DGRKQLVGLLTKDPKVVLEEGAQIVAD 927 >gi|85705215|ref|ZP_01036314.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. 217] gi|85670088|gb|EAQ24950.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. 217] Length = 976 Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + T TL R +L G ++ +++ E Sbjct: 641 CDVSTLGKIDVQGPDAARFLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTCARMGET 700 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 701 HFVMTTTTAAAGQVMRHLEF 720 >gi|90423081|ref|YP_531451.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas palustris BisB18] gi|90105095|gb|ABD87132.1| glycine cleavage system T protein [Rhodopseudomonas palustris BisB18] Length = 384 Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 61/304 (20%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ D+L + R + QG IL +++ L ++ + + + Sbjct: 76 ADAARALERLVPQDILAIAPGRQRYAQFTNEQGGILDDLMVANSGR-HLFLVVNAACKAA 134 Query: 77 LIDKLL----------------------------FYKLRSNVI---------IEIQPING 99 L +L S V + + ++ Sbjct: 135 DEAHLRDGLSDVCDIVSRPDRALLALQGPHAEAALSRLCSQVDTLRFMDTAPLTVMGLDC 194 Query: 100 VV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157 +V + E + S D ++A+ LL E + + LR+ G+ Sbjct: 195 LVSRSGYTGEDGYEISVPADGAVALAEALL----DDPEVLPIGLGARDSLRLEAGLCLYG 250 Query: 158 TDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 D ++ P +A ++ NG G + G V+ R+R + Sbjct: 251 HDI-DASTTPVEAALEWSIQKSRRNG-GPRPGGFAGAAVILDQLETGAPRRRVGLRPDGR 308 Query: 212 DLPPSGSPILTDD---IEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGV 262 G+P+ DD IGT+ G A+ + H L + Sbjct: 309 APVREGAPLFGDDSATDSIGTISSGGFGPSLGGPLAMGYLPTPQARHDAVIFAELRGQRL 368 Query: 263 RVKA 266 ++ Sbjct: 369 PLRV 372 >gi|29135267|ref|NP_803451.1| aminomethyltransferase, mitochondrial precursor [Bos taurus] gi|121084|sp|P25285|GCST_BOVIN RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|163771|gb|AAA30786.1| T-protein [Bos taurus] gi|296474756|gb|DAA16871.1| aminomethyltransferase precursor [Bos taurus] Length = 397 Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 82/277 (29%), Gaps = 58/277 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G + +++++ D+ L S G IL +++ E + + Sbjct: 82 KIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAG 141 Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 R+ + L+ K+R S+V +E+ + L + D Sbjct: 142 CREKDLT-LMQDKVRELQNKGSDVALEVMDNALLALQGPTAAQVLQAGVADDLRKLPFMT 200 Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149 E F ++ + R + E + + LR+ Sbjct: 201 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSLRL 260 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL------NGISLTKGCYIGQEVVSRIQHRNIIRKR 203 G+ D P + + + G V+ Q ++ ++R Sbjct: 261 EAGLCLYGNDI-DEHTTPVEGSLSWTLGKRRRAAMDF-----PGASVIV-PQLKSKAQRR 313 Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239 + + + SPIL+ + IG + L Sbjct: 314 RVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCL 350 >gi|330974137|gb|EGH74203.1| aminomethyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 968 Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 E F V L G ++ + H LR+ +V+ F Sbjct: 760 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ + Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRHSVDILEAQPQK 879 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 940 PIRVE-DGVVVQATV 953 >gi|254438049|ref|ZP_05051543.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus 307] gi|198253495|gb|EDY77809.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus 307] Length = 1007 Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G A FL + T + TLP R + G + ++++I+++T++ Sbjct: 681 VKGSDAGKFLDMMYTNMMSTLPIGKCRYGLMCGENGFLSDDGVVARIDDNTWLCHTTTGG 740 Query: 74 RDSLIDKL 81 D++ + Sbjct: 741 ADTVHAHM 748 >gi|60677753|gb|AAX33383.1| RH05648p [Drosophila melanogaster] Length = 409 Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 85 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 144 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 145 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 202 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 SSF+ I +V + R E + + Sbjct: 203 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 262 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D S P +A + L ++ + + G +V+ + Sbjct: 263 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 319 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I + ++G + Sbjct: 320 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 355 >gi|330957190|gb|EGH57450.1| glycine cleavage system aminomethyltransferase T [Pseudomonas syringae pv. maculicola str. ES4326] Length = 360 Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + I V G A +L+ ++ DV L A SA+L G I+ ++ D + Sbjct: 50 SHMNVIDVTGLQANAWLRYLLANDVDRLKTSGRALYSAMLDEAGGIIDDMIVYLTA-DGY 108 Query: 66 ILEIDRSKRDSLIDKLL 82 L ++ + + + Sbjct: 109 RLVVNAANGAKDLAWMK 125 >gi|121634369|ref|YP_974614.1| glycine cleavage system aminomethyltransferase T [Neisseria meningitidis FAM18] gi|120866075|emb|CAM09813.1| putative aminomethyltransferase [Neisseria meningitidis FAM18] Length = 368 Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 54 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 110 >gi|325127669|gb|EGC50582.1| glycine cleavage system T protein [Neisseria meningitidis N1568] gi|325131753|gb|EGC54454.1| glycine cleavage system T protein [Neisseria meningitidis M6190] gi|325137643|gb|EGC60220.1| glycine cleavage system T protein [Neisseria meningitidis ES14902] gi|325144038|gb|EGC66348.1| glycine cleavage system T protein [Neisseria meningitidis M01-240013] gi|325197786|gb|ADY93242.1| glycine cleavage system T protein [Neisseria meningitidis G2136] Length = 366 Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|240138213|ref|YP_002962685.1| putative Sarcosine oxidase alpha subunit [Methylobacterium extorquens AM1] gi|240008182|gb|ACS39408.1| putative Sarcosine oxidase alpha subunit [Methylobacterium extorquens AM1] Length = 1009 Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 34/72 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++ Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 739 ANAARVMQHLEF 750 >gi|161869507|ref|YP_001598674.1| glycine cleavage system aminomethyltransferase T [Neisseria meningitidis 053442] gi|161595060|gb|ABX72720.1| aminomethyltransferase [Neisseria meningitidis 053442] Length = 366 Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|261393056|emb|CAX50651.1| glycine cleavage system T protein (aminomethyltransferase) [Neisseria meningitidis 8013] Length = 366 Score = 39.8 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|254560773|ref|YP_003067868.1| sarcosine oxidase subunit alpha [Methylobacterium extorquens DM4] gi|254268051|emb|CAX23922.1| sarcosine oxidase, alpha subunit [Methylobacterium extorquens DM4] Length = 1009 Score = 39.8 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 34/72 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++ Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 739 ANAARVMQHLEF 750 >gi|297172775|gb|ADI23740.1| uncharacterized NAD(FAD)-dependent dehydrogenases [uncultured Rhodospirillales bacterium HF4000_38H21] Length = 997 Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 28/73 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R +L G I +I ++ +D F Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWTKLAPGRTRYGLLLGDDGFIRDDGVIGRLSDDRFH 723 Query: 67 LEIDRSKRDSLID 79 + +++ Sbjct: 724 ITTTTGGAARVLN 736 >gi|145543448|ref|XP_001457410.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124425226|emb|CAK90013.1| unnamed protein product [Paramecium tetraurelia] Length = 395 Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +KV G+ + F++ + T D T + IL + I+ +++K +D Sbjct: 70 SHMGQVKVFGEDRMKFVETLTTGDFQTKKSGQSVLCLILNEKAGIIDDTIVAKR-DDHIH 128 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ + + ++ Sbjct: 129 IVVNAGNKFIDMKQMDK 145 >gi|13474360|ref|NP_105928.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] gi|14025113|dbj|BAB51714.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] Length = 961 Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 4/139 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ + + TL R +L+ G + ++ +++E F+ Sbjct: 630 STLGKIEVIGPKAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFV 689 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 + S ++ +L ++ R V I + L+ + + +D S+ Sbjct: 690 VSCSSSHVAAVHARLEEWRQDRFGREAVYIHNATSDMATLTVSGPNACKLLETVDLGLSL 749 Query: 123 ADVLLHRTWGHNEKIASDI 141 D L + D Sbjct: 750 DDADLPHMAIGHGSYGGDA 768 >gi|59802899|sp|Q9JVP2|GCST_NEIMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|319409952|emb|CBY90279.1| glycine cleavage system T protein (aminomethyltransferase) [Neisseria meningitidis WUE 2594] gi|325203666|gb|ADY99119.1| glycine cleavage system T protein [Neisseria meningitidis M01-240355] Length = 366 Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|218767697|ref|YP_002342209.1| glycine cleavage system aminomethyltransferase T [Neisseria meningitidis Z2491] gi|121051705|emb|CAM08008.1| putative aminomethyltransferase [Neisseria meningitidis Z2491] Length = 368 Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 54 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 110 >gi|13472722|ref|NP_104289.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] gi|14023469|dbj|BAB50075.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] Length = 997 Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 89/298 (29%), Gaps = 65/298 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F++ + T L R +L G I ++ ++ D F Sbjct: 664 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQPI--NGVVLSWNQEHTF 110 + +++ + Y L S +I +Q ++ + Sbjct: 724 VTTTTGGAPRVMNHMEDYLQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEGIDM 783 Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146 S+ + + R R + N + Sbjct: 784 SDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHGATA 843 Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 LR G + D T+ P+DA +D + K ++G ++R Sbjct: 844 YGTESMHVLRAEKGYIIVGQD-TDGTVTPNDAGLDW--AVGKKKTDFVGIRGMARSDLVA 900 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAIA 242 RK+ + + D + G+ I+ D + IG + + ALA+ Sbjct: 901 KGRKQLVGLKTRDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSQNCGRSIALALV 958 >gi|325135836|gb|EGC58448.1| glycine cleavage system T protein [Neisseria meningitidis M0579] gi|325202637|gb|ADY98091.1| glycine cleavage system T protein [Neisseria meningitidis M01-240149] gi|325207617|gb|ADZ03069.1| glycine cleavage system T protein [Neisseria meningitidis NZ-05/33] Length = 366 Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|219114339|ref|XP_002176340.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217402586|gb|EEC42576.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 421 Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 54/282 (19%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S +S+ I+ GK + FL+ ++ D+ +L + S + +G I+ +I+ Sbjct: 88 SLFDVSHMGQIRWHGKDRVAFLERVVVGDIASLKEGMGCLSLVTNEKGGIIDDTVITNAG 147 Query: 62 EDTFILEIDRSKRDSLIDKL--LFYKLRSNVIIEIQPINGVVLSWNQEHTFSN------S 113 + F++ ++ + + + +V +E + +L+ ++ S Sbjct: 148 DHVFMV-VNGATKFGDMKHFEEQMAVFDGDVTMEYLEDSMQLLAVQGPGAAASVAKLLPS 206 Query: 114 SFIDERFSIADVLLHRTWG-----------------------------------HNEKIA 138 F R G + Sbjct: 207 DFDMTRMPFMSGRPTTLDGVDGCRITRCGYTGEDGFEIAMPTEHAVSIASKLMEDSSVNP 266 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQE--VVS 192 + + LR+ G+ D I P + ++ G + ++ G ++G E + Sbjct: 267 TGLGARDSLRLEAGLCLYGNDL-NEDITPVEGVLGWTLGPAKSRRRTEGGFLGAEHILTP 325 Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232 + + + RKR + I G + I + +IG + Sbjct: 326 DGKLQKVNRKR-VGIMGMKAPARDHTEIFDENGENKIGEVTS 366 >gi|330813961|ref|YP_004358200.1| aminomethyltransferase (glycine cleavage system T protein) [Candidatus Pelagibacter sp. IMCC9063] gi|327487056|gb|AEA81461.1| aminomethyltransferase (glycine cleavage system T protein) [Candidatus Pelagibacter sp. IMCC9063] Length = 364 Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 94/288 (32%), Gaps = 48/288 (16%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR--------------- 74 D+ L ++ S ++ QG I +++++ ++ + ++ + + Sbjct: 76 DLSVLKMNQSKYSFLMNEQGGIDDDLIVTRV-KNGINIVLNAACKHSDVKTLKNILPNPD 134 Query: 75 -DSLIDKLLFYKLRSNVIIEIQP--INGVV---LSWNQEHTFSNSSFIDERFSIADVLLH 128 +L D L ++ + + I + GV E +++ + R + Sbjct: 135 CATLHDHLALIAVQGPLAVSILEEIVPGVADLKFMNGGEFSYNGETIYITRSGYTGEDGY 194 Query: 129 RTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 NEKI + LR+ G+ D T P +A DL Sbjct: 195 EISISNEKITKLCEELLSKNKIAMIGLGARDSLRLEAGLCLYGHDL-DKTTSPIEA--DL 251 Query: 175 LNGISLTKGC---YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 + GI+ + ++G +VV + + RKR I + G+ I + E+G + Sbjct: 252 MFGIAKNRRATFDFVGGDVVKAHVEKGVTRKRVGIKLEGKIIAREGAKIFQSEKEVGVVT 311 Query: 232 VVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + D + + + K +YK Sbjct: 312 SGCFGPSVGSAVVIGYVNFDCSEEGTSVELEVRGKQYPAKICLLPFYK 359 >gi|167646326|ref|YP_001683989.1| sarcosine oxidase subunit alpha family protein [Caulobacter sp. K31] gi|167348756|gb|ABZ71491.1| sarcosine oxidase, alpha subunit family [Caulobacter sp. K31] Length = 984 Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 80/256 (31%), Gaps = 38/256 (14%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T TL AR +L G + ++ D Sbjct: 648 CDVSTLGKIDIHGPDAGAFLDRLYTGTFSTLAVGRARYGVMLREDGFVFDDGTTTRFAPD 707 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122 + L ++ + Y V + P V +S ++ + + R I Sbjct: 708 RYFLTTTTVNAGRVMQHID-YA--RQV---LWPELDVQAVSVTEQWASFSIAGPASRALI 761 Query: 123 ADVL--LHRTWGHNEKIASDIKTYH-------------ELRINHGIVDPNTDFLPSTIFP 167 AD+L + +A+ + EL + D L +F Sbjct: 762 ADLLSGFDVSNASFAPMAAAELEWEGLPARLFRLSFSGELAYELCVPASAGDALVRRLFE 821 Query: 168 HDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---------IITGTD 211 A + L + + KG G E+ + ++ R M +++G Sbjct: 822 LGAPYGVTPYGTEALGVMRIEKGHVAGPELNGQTTAADLGLGRMMSTKKDYIGRVLSGRP 881 Query: 212 DLPPSGSPILTDDIEI 227 L P+L + + Sbjct: 882 ALVDPDRPVLVGLVPV 897 >gi|20129441|ref|NP_609441.1| CG6415 [Drosophila melanogaster] gi|7297745|gb|AAF52996.1| CG6415 [Drosophila melanogaster] Length = 405 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ GK A L+++ TAD+L P + G IL +++K+ E + + + Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140 Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112 ++ + +D +V IE + P + +++ Sbjct: 141 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 198 Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143 SSF+ I +V + R E + + Sbjct: 199 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 258 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200 LR+ G+ +D S P +A + L ++ + + G +V+ + Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 315 Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234 R+R + + GT P SG I + ++G + Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 351 >gi|13476083|ref|NP_107653.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] gi|14026843|dbj|BAB53439.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099] Length = 993 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 73/252 (28%), Gaps = 63/252 (25%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + L AR +L G + S++ ED Sbjct: 655 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 714 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 + L +K ++ L F VL + ++ S +FSIA Sbjct: 715 HYFLTTTTAKAGLVMQHLEF--------------CRQVLFPELDVQLTSVSDQWAQFSIA 760 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 A D+ + FP Sbjct: 761 GPKTRDLLKEIVDPAEDLS--------------------NEGFP---------------- 784 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLG--------VVV 234 ++G V+ R I+ R I+ + ++ P + G L Sbjct: 785 -FMGAREVA---LRGGIKARLFRISFSGEMAFEISVPARYGEAMAGNLMLAGKPFGVTPY 840 Query: 235 GKKALAIARIDK 246 G +AL + RI+K Sbjct: 841 GTEALGVMRIEK 852 >gi|254512362|ref|ZP_05124429.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium KLH11] gi|221536073|gb|EEE39061.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium KLH11] Length = 819 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 56/168 (33%), Gaps = 9/168 (5%) Query: 12 IKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 ++V G A L +TA+ + + +L +G+I L I+++ D + L Sbjct: 498 VEVSGPGAYALLDH--LTANRMPQKDGAITLTHMLNRRGRIELETTITRMAHDRYYLVCA 555 Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130 L+D L ++ +I + + + + + R Sbjct: 556 AFFEQRLLDHLRNARIFDENSTDILNRSSQWSALSLNGPRARDVLAACTDADLSNAGFRW 615 Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178 + ++ + R+++ + P+ A +D+ + Sbjct: 616 LSARQITVAEHDVW-AFRMSYA-----GELGWELHMPNAACLDVYTAL 657 >gi|296314946|ref|ZP_06864887.1| glycine cleavage system T protein [Neisseria polysaccharea ATCC 43768] gi|296838142|gb|EFH22080.1| glycine cleavage system T protein [Neisseria polysaccharea ATCC 43768] Length = 366 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|254673437|emb|CBA08791.1| glycine cleavage system T protein [Neisseria meningitidis alpha275] Length = 366 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|221507757|gb|EEE33344.1| aminomethyltransferase, putative [Toxoplasma gondii VEG] Length = 867 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ + Sbjct: 499 SLFDLAFRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 557 Query: 62 EDTFILEIDRSKRDSLIDKL 81 D ++ + + ++ +L Sbjct: 558 RDFLLIIGNACNKSKILSRL 577 >gi|221483265|gb|EEE21584.1| aminomethyltransferase, putative [Toxoplasma gondii GT1] Length = 867 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ + Sbjct: 499 SLFDLAFRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 557 Query: 62 EDTFILEIDRSKRDSLIDKL 81 D ++ + + ++ +L Sbjct: 558 RDFLLIIGNACNKSKILSRL 577 >gi|222110934|ref|YP_002553198.1| glycine cleavage system t protein [Acidovorax ebreus TPSY] gi|221730378|gb|ACM33198.1| glycine cleavage system T protein [Acidovorax ebreus TPSY] Length = 376 Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 34/76 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G A + ++ DV+ LP R +L +G I+ + ++ +D Sbjct: 56 SHMGQLKLVGPDAAAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELF 115 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + + I + Sbjct: 116 VIVNGACKVGDIAHIQ 131 >gi|13471285|ref|NP_102854.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] gi|14022029|dbj|BAB48640.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] Length = 856 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 84/297 (28%), Gaps = 68/297 (22%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67 +V G A FL ++T + + ++ GK++ F I+K ED F++ Sbjct: 495 EVSGPGAEEFLNRLMTNRMPK--TGRIVLTPMINEFGKLIGDFTIAKAGEDRFMIWGSSA 552 Query: 68 -----------EIDRS--------------------KRDSLIDKLLFYKLRSNVIIEIQP 96 + + K L+ KL V ++I Sbjct: 553 AQKYHMRWFEKHLPKDGSVRIHRFDQTLVGLSIAGPKSRDLLQKL--------VDVDIST 604 Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139 + + + ++ R + L + W + Sbjct: 605 KAFRFMDFREMAVGGAPCMVN-RITYTGDLGYEIWMAPAYQRLVYKAIKDAGEEFGLVDF 663 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 ++ +R+ + P P + MD I L K +IG+E ++ Q Sbjct: 664 GMRALLSMRLEKNFPTWFRELRP-IYGPFEGSMDRF--IKLEKNDFIGREAAAKEQAEGP 720 Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256 +R I D G + + G V R D ++ A Sbjct: 721 KLRRVSFIVDAADADVMGDEPIWAKVSK-DYGTVEKPHGYGAPRFDDKGKEVRGSKA 776 >gi|325141797|gb|EGC64245.1| glycine cleavage system T protein [Neisseria meningitidis 961-5945] Length = 276 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|319639334|ref|ZP_07994085.1| aminomethyltransferase [Neisseria mucosa C102] gi|317399518|gb|EFV80188.1| aminomethyltransferase [Neisseria mucosa C102] Length = 366 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|282859538|ref|ZP_06268643.1| tRNA modification GTPase TrmE [Prevotella bivia JCVIHMP010] gi|282587766|gb|EFB92966.1| tRNA modification GTPase TrmE [Prevotella bivia JCVIHMP010] Length = 446 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL--ISK-----IE 61 I++ G AIPF+ +I + D+ + IL GK++ + + + Sbjct: 16 LGIIRIAGSEAIPFVNSIFSKDITSAKANTIHYGNILDQSGKVIDEVVVSLWRAPHSYTG 75 Query: 62 EDTFILEIDRS 72 ED + S Sbjct: 76 EDAIEISCHGS 86 >gi|304388192|ref|ZP_07370313.1| glycine cleavage system T protein [Neisseria meningitidis ATCC 13091] gi|304337803|gb|EFM03951.1| glycine cleavage system T protein [Neisseria meningitidis ATCC 13091] Length = 366 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|255067565|ref|ZP_05319420.1| glycine cleavage system T protein [Neisseria sicca ATCC 29256] gi|255048186|gb|EET43650.1| glycine cleavage system T protein [Neisseria sicca ATCC 29256] Length = 366 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|254486681|ref|ZP_05099886.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter sp. GAI101] gi|214043550|gb|EEB84188.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter sp. GAI101] Length = 806 Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 93/286 (32%), Gaps = 66/286 (23%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +SN + + G A +L ++ + + + ++ +G I F ++++ ED Sbjct: 481 IDISNFAKYRCAGPGAEDWLNSLFANTMPK-AVGRSCLTPLIGVRGGIAGDFTVTRMAED 539 Query: 64 TFILE-----------------------------------IDRSKRDSLIDKLL------ 82 F + + K ++ +L Sbjct: 540 EFWIIGSGMAERYHQRFFNALPLPDGTIFESRTVDMCGFNVAGPKSREMLQRLTNTSFET 599 Query: 83 --FYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139 F +RS V + + + +S+ + + +++ + LL Sbjct: 600 ADFPFMRSKWVEMAGIRVLALRVSFTGDLGWELHCATEDQPQLYAALLE-AGRDLGAGPV 658 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199 + LRI G ++ P +P + +D L C + +E +++ ++ Sbjct: 659 GSRALMSLRIEKGYGSWGREYSPE-YWPQEVGLDRL--------CKLDKEFLNKAAVMDV 709 Query: 200 I----RKRPMIITGTDDL-------PPSGSPILTDDIEIGTLGVVV 234 + R+R +++ D G PI D + +G + Sbjct: 710 LEKPARERLVVLALDADATDASNADATGGEPIFKDGVGVGRVTSGA 755 >gi|319780026|ref|YP_004139502.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165914|gb|ADV09452.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 958 Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 4/107 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ + + TL R +L+ G + ++ +++E FI Sbjct: 627 STLGKIEVIGPQAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFI 686 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHT 109 + S ++ +L ++ RS V I + L+ + + Sbjct: 687 VSCSSSHVAAVHARLEEWRQDRFGRSAVYIHNATPDMATLTVSGPNA 733 >gi|309379578|emb|CBX21749.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 366 Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|260459585|ref|ZP_05807839.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] gi|259034387|gb|EEW35644.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075] Length = 812 Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 88/307 (28%), Gaps = 57/307 (18%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-IDR 71 +V G A +L I+ + L + LTP G + ++++++ D F L R Sbjct: 497 EVSGPGAERWLDGILANRLPKL--GRIALAHHLTPAGGVQAEYVVARLGSDLFYLVSTPR 554 Query: 72 SKR---DSLIDKLLFYK---LR----------------SNV-----IIEIQPINGVVLSW 104 ++R D L L LR V I++ S Sbjct: 555 AERWNHDDLSRLLPMDGSVHLRNVTNDRGSFTVVGPKAREVLQPLTEIDLSNEAFPWFSV 614 Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHEL 147 S R + + L + + ++ L Sbjct: 615 RSATVGLASDVRLMRVNYSGELGWELYHPLCYQRHLLDALLASGQAHGLRLVGLQALESL 674 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R++ D ++ +D + L KG +IG+ ++ Q + R+ + Sbjct: 675 RLDKSYRAMYRDMNLELSAW-ESGLDRF--VRLDKGDFIGRAALAAKQKQGTTRRIVTLS 731 Query: 208 TGTDDLPPSGSP-ILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260 TD + D +G + ALA+ + +++ Sbjct: 732 IDTDGASAFAYEGVYRDGKLVGRVTSAGYSYTFGHDIALALLPAELGTPGTALEVSILGE 791 Query: 261 GVRVKAS 267 K Sbjct: 792 RRPAKVI 798 >gi|158423118|ref|YP_001524410.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158330007|dbj|BAF87492.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 987 Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 76/253 (30%), Gaps = 63/253 (24%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +S I V G A FL + +L AR +L G ++ +++E Sbjct: 648 LIDVSTFGKIDVQGPDAAVFLDRVYINTFSSLSVGKARYGVMLREDGIVMDDGTTARLEP 707 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 D FI+ + + L F + + W + +D + + Sbjct: 708 DHFIMTTTTANAAKVFQHLEF---------------CLQVLWPE---------LDVQLAS 743 Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182 + K + +VD N D + P Sbjct: 744 VSEQWAQISISGPK---------SREVLAKVVDANVD-VSGEALP--------------- 778 Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILTDDIEIGTLGVVV- 234 Y+G V + ++ R ++ +L G + + G + Sbjct: 779 --YMG---VLQASVMGGVKARIFRLSFAGELGYEIAVSASHGEELTRALMSAGEPFGITP 833 Query: 235 -GKKALAIARIDK 246 G +ALA+ RI+K Sbjct: 834 YGTEALAVMRIEK 846 >gi|28493605|ref|NP_787766.1| aminomethyltransferase [Tropheryma whipplei str. Twist] gi|28476647|gb|AAO44735.1| aminomethyltransferase [Tropheryma whipplei str. Twist] Length = 356 Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 52/216 (24%) Query: 6 LSNQSFIKVCGKSAIPFLQAI-----ITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60 LS+ + I V G +A + +T + A+ + IL QG I ++ +I Sbjct: 51 LSHMAEIFVSGVNA-----GLELDIALTGHFSDMTCGRAKYTLILNEQGGIEDDLIVYRI 105 Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 ++ +++ + R + L S++ E I+ V + + + F Sbjct: 106 DDKNYMVVANGINRKKVFSLLRDRVHTSDIKDETDSISLVAVQGPESESLIRDLFHESGN 165 Query: 116 -----------------------IDERFSIAD-------------VLLHRTWGHNEKIAS 139 I R V + R Sbjct: 166 LRYFSHRCYPHGGTDRSEKLSCSIVARTGYTGEDGFEIFTPNDSVVSIWRALIERGATPC 225 Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175 + + LRI G+ + + + P A ++ Sbjct: 226 GLAARNTLRIEAGMPLYGHEL-RADLNPVQAGLERF 260 >gi|298370093|ref|ZP_06981409.1| glycine cleavage system T protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281553|gb|EFI23042.1| glycine cleavage system T protein [Neisseria sp. oral taxon 014 str. F0314] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|261379960|ref|ZP_05984533.1| glycine cleavage system T protein [Neisseria subflava NJ9703] gi|284797158|gb|EFC52505.1| glycine cleavage system T protein [Neisseria subflava NJ9703] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|261378007|ref|ZP_05982580.1| glycine cleavage system T protein [Neisseria cinerea ATCC 14685] gi|269145879|gb|EEZ72297.1| glycine cleavage system T protein [Neisseria cinerea ATCC 14685] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|218680472|ref|ZP_03528369.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CIAT 894] Length = 530 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 18/199 (9%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ G+ A FL + L AR +L G I S+ + Sbjct: 284 LCDVSTLGKIEIFGRDAATFLDRVYCNGFSKLALGKARYGIMLREDGFIYDDGTTSRFSD 343 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107 D F + + ++ L F +++ P + +L+ + Sbjct: 344 DHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 403 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167 S+++F + R G +I+ + +EL + G + D + + Sbjct: 404 EDISDAAFPFMSARKVSLFAGRLEGRLFRISFSGELAYELAVPAGYGESVADAIMAAGEK 463 Query: 168 H---DALMDLLNGISLTKG 183 H ++ L + + KG Sbjct: 464 HGISAYGVEALGVMRIEKG 482 >gi|254390744|ref|ZP_05005957.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|197704444|gb|EDY50256.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 816 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ FLQ + T + P + +L + I ++++ ED F L Sbjct: 505 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 560 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106 + + +D LL + + V I +I + W Sbjct: 561 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 595 >gi|121594298|ref|YP_986194.1| glycine cleavage system T protein [Acidovorax sp. JS42] gi|120606378|gb|ABM42118.1| glycine cleavage system T protein [Acidovorax sp. JS42] Length = 376 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 34/76 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G A + ++ DV+ LP R +L +G I+ + ++ +D Sbjct: 56 SHMGQLKLVGPDAAAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELF 115 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + + I + Sbjct: 116 VIVNGACKVGDIAHIQ 131 >gi|308388760|gb|ADO31080.1| glycine cleavage system aminomethyltransferase T [Neisseria meningitidis alpha710] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|294812677|ref|ZP_06771320.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294325276|gb|EFG06919.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 840 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ FLQ + T + P + +L + I ++++ ED F L Sbjct: 529 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 584 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106 + + +D LL + + V I +I + W Sbjct: 585 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 619 >gi|254804457|ref|YP_003082678.1| glycine cleavage system T protein [Neisseria meningitidis alpha14] gi|254667999|emb|CBA04335.1| glycine cleavage system T protein [Neisseria meningitidis alpha14] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|225077404|ref|ZP_03720603.1| hypothetical protein NEIFLAOT_02465 [Neisseria flavescens NRL30031/H210] gi|224951264|gb|EEG32473.1| hypothetical protein NEIFLAOT_02465 [Neisseria flavescens NRL30031/H210] Length = 366 Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|326441169|ref|ZP_08215903.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064] Length = 803 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 ++V G A+ FLQ + T + P + +L + I ++++ ED F L Sbjct: 492 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 547 Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106 + + +D LL + + V I +I + W Sbjct: 548 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 582 >gi|254671484|emb|CBA09047.1| glycine cleavage system T protein [Neisseria meningitidis alpha153] Length = 366 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|241759409|ref|ZP_04757513.1| glycine cleavage system T protein [Neisseria flavescens SK114] gi|241320191|gb|EER56524.1| glycine cleavage system T protein [Neisseria flavescens SK114] Length = 366 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|261366008|ref|ZP_05978891.1| glycine cleavage system T protein [Neisseria mucosa ATCC 25996] gi|288565395|gb|EFC86955.1| glycine cleavage system T protein [Neisseria mucosa ATCC 25996] Length = 366 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|15676479|ref|NP_273618.1| glycine cleavage system aminomethyltransferase T [Neisseria meningitidis MC58] gi|11132399|sp|Q9K0L8|GCST_NEIMB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|7225802|gb|AAF41002.1| glycine cleavage system T protein [Neisseria meningitidis MC58] gi|316985444|gb|EFV64392.1| glycine cleavage system T protein [Neisseria meningitidis H44/76] gi|325133909|gb|EGC56565.1| glycine cleavage system T protein [Neisseria meningitidis M13399] gi|325139774|gb|EGC62307.1| glycine cleavage system T protein [Neisseria meningitidis CU385] gi|325200738|gb|ADY96193.1| glycine cleavage system T protein [Neisseria meningitidis H44/76] gi|325206575|gb|ADZ02028.1| glycine cleavage system T protein [Neisseria meningitidis M04-240196] Length = 366 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|171319388|ref|ZP_02908496.1| glycine cleavage system T protein [Burkholderia ambifaria MEX-5] gi|171095387|gb|EDT40362.1| glycine cleavage system T protein [Burkholderia ambifaria MEX-5] Length = 372 Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I V L A S +L PQG ++ ++ ED F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|319950638|ref|ZP_08024542.1| hypothetical protein ES5_13655 [Dietzia cinnamea P4] gi|319435680|gb|EFV90896.1| hypothetical protein ES5_13655 [Dietzia cinnamea P4] Length = 195 Score = 39.8 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S++ + + G + +L+ ++ V + + +L G+I + +++ ++ T + Sbjct: 55 SHRDVLTIGGGERLTWLEGFVSQHVADIGDGGGGETLVLDANGRIEHHAVLADVDA-TVV 113 Query: 67 LEIDRSKRDSLIDKLLFYKL 86 ++ + + SL+ L Sbjct: 114 MDTEPGRGASLLQFLTKMVF 133 >gi|150397948|ref|YP_001328415.1| sarcosine oxidase subunit alpha family protein [Sinorhizobium medicae WSM419] gi|150029463|gb|ABR61580.1| sarcosine oxidase, alpha subunit family [Sinorhizobium medicae WSM419] Length = 997 Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 65/323 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL + T L R +L G + ++ ++ +D F Sbjct: 664 STLGKIEVVGPDAAAFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLADDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118 + ++ + Y V + V++ + + E Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPRAREIIAPLVEGIDL 783 Query: 119 -----------------------RFSIADVLL--------------HRTWGHNEKIAS-- 139 R S L W E + + Sbjct: 784 SKEAFPHMSVAEGSICGVPTRLFRMSFTGELGFEVNVPADFGQAVWEAIWARAEPMGACA 843 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P DA + +S K ++G + R Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPEDAGLSW--AVSKKKPDFVGIRGMKRPDLVK 900 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGV------VVGKKALAIARI 244 RK+ + + D + G+ I+ D + +G + ALA+ Sbjct: 901 EGRKQLVGLLAKDPQVVLEEGAQIVADPNQPKPMTMLGHVTSSYWSPNCGRSIALAVVAG 960 Query: 245 DKVDHAIKKGMALTVHGVRVKAS 267 + H + + + V+ S Sbjct: 961 GRARHGQTLYVPMADRTIAVEVS 983 >gi|89069878|ref|ZP_01157212.1| sarcosine oxidase, alpha subunit family protein [Oceanicola granulosus HTCC2516] gi|89044554|gb|EAR50673.1| sarcosine oxidase, alpha subunit family protein [Oceanicola granulosus HTCC2516] Length = 972 Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 2/113 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + + TL R +L G ++ +++ ++ Sbjct: 644 STLGKIDVQGPDAAAFLDFVYANRMSTLAEGRVRYGIMLREDGFVMDDGTCARLGPAHYL 703 Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117 + + ++ L F + LR ++ + I + + + D Sbjct: 704 VTTTTAAAGQVMRHLDFARQVLRPDLDVGIASATEQWAQFAVAGPRAGALLAD 756 >gi|15966606|ref|NP_386959.1| putative sarcosine oxidase alpha subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|307300359|ref|ZP_07580139.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti BL225C] gi|307319642|ref|ZP_07599068.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti AK83] gi|15075878|emb|CAC47432.1| Putative sarcosine oxidase alpha subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|306894764|gb|EFN25524.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti AK83] gi|306904525|gb|EFN35109.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti BL225C] Length = 997 Score = 39.4 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 78/267 (29%), Gaps = 53/267 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL + T L R +L G + ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAEFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQE--------------- 107 + ++ + Y V + V++ Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIAPLVEGIDL 783 Query: 108 --HTFSNSSFIDERFSIADVLLHR------------------------TWGHNEKIAS-- 139 F + S + R L R W E + + Sbjct: 784 SNEAFPHMSVAEGRICGVPTRLFRMSFTGELGFEVNVPADYGQAVWEAIWARAEPMGACA 843 Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P DA + +S K ++G + R Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPDDAGLSW--AVSKKKQDFVGIRGMKRPDLVK 900 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + G+ I+ D Sbjct: 901 EGRKQLVGLLTKDPQVVLEEGAQIVAD 927 >gi|312881987|ref|ZP_07741741.1| sarcosine oxidase, alpha subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309370282|gb|EFP97780.1| sarcosine oxidase, alpha subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 1007 Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 28/77 (36%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + GK A FL + T L R + G I + S I ++ FI Sbjct: 672 STLGKIDIQGKDAREFLNRVYTNAWSKLEPGRCRYGIMCKDDGMIFDDGVTSCISDNHFI 731 Query: 67 LEIDRSKRDSLIDKLLF 83 + +++D L Sbjct: 732 MTTTSGGAAAVLDWLEL 748 >gi|294084911|ref|YP_003551671.1| putative aminomethyltransferase (glycine cleavage system t protein) [Candidatus Puniceispirillum marinum IMCC1322] gi|292664486|gb|ADE39587.1| putative aminomethyltransferase (glycine cleavage system t protein) [Candidatus Puniceispirillum marinum IMCC1322] Length = 376 Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 64/283 (22%) Query: 1 MSSVYLSNQSFIKVCGKS-AIPFLQAIIT-ADVLTLPYKIARGSAILTPQGKILLYFLIS 58 M+ + L + G A + A +T D+ + R S L G +L +I+ Sbjct: 54 MAQISLDS------VGDDKAADAMLAQLTPTDLGLINEGRVRYSMFLDDNGGVLDDLMIA 107 Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------- 109 +++ L + + D I L + L +V + + ++ + Sbjct: 108 RLDG-RLQLVANAGRADHDIAHLKAH-LGEHVRMTVHDDLSLIALQGPKAATVLEDLGIK 165 Query: 110 ----FSNSSFIDERFS---------------------------IADVLLHRTWGHNEKIA 138 +N +F+D R + + HN+ Sbjct: 166 LDVDMANFAFMDIRHATLMGTKVTLTRSGYTGEDGFEISIPNTAVVEITTALAAHNDVHL 225 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSR 193 + LR+ G+ + TI P +A + G +L+K G + G + Sbjct: 226 VGLGARDTLRMEAGLPLWGHEL-SETINPVEAGL----GFALSKRRRDAGDFPGANPILA 280 Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDI----EIGTLGV 232 + RK ++ G+ + D EIG + Sbjct: 281 DLNNGPARKLVGLLPEGGRPVRDGTILKHGDEGDETEIGFVSS 323 >gi|163739832|ref|ZP_02147239.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis BS107] gi|161386866|gb|EDQ11228.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis BS107] Length = 815 Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 93/312 (29%), Gaps = 52/312 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L S + G+ A FL+ ++T + + + +G+IL + ED F Sbjct: 501 LPGFSRFNLSGEGAAEFLRGLVTGGLPKVGRMNLVYVS--DDRGRILTEMSCIRHGEDHF 558 Query: 66 ILEIDRSKR---DSLIDKLLFYKLR-----------------SN---VIIEIQPINGVVL 102 + S + ++ K L LR S I ++ L Sbjct: 559 TMITAGSAQWHDFEILKKALPAGLRLTDHTTEFATMIVTGPQSRDLFAGISDADLSLGWL 618 Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRI 149 + + +F+ R S A L NE + LRI Sbjct: 619 THQEATVAGKPAFL-ARVSYAGELGWEVHCANEHQPAIYDALLAGGAKPFGMYALNSLRI 677 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MII 207 G D + ++ + L K + G+ + + + + + +I+ Sbjct: 678 EKGYRTWKGDLSTDYSL-LEGGLERF--VKLDKPQDFPGKAAIQSEKQQGVKKSFVTLIV 734 Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261 D P S I D +G V AL + R D + + + Sbjct: 735 EAGDADAPYMSCIWKDGEIVGETTSGDWGYRVNASIALGMVRSDAAVPGTELEVEIYGEK 794 Query: 262 VR--VKASFPHW 271 R V+ P W Sbjct: 795 FRAVVQEDKPLW 806 >gi|186472191|ref|YP_001859533.1| sarcosine oxidase alpha subunit family protein [Burkholderia phymatum STM815] gi|184194523|gb|ACC72487.1| sarcosine oxidase, alpha subunit family [Burkholderia phymatum STM815] Length = 999 Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 80/266 (30%), Gaps = 54/266 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAAKLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99 + ++ + K+R V+ ++ I+ Sbjct: 725 MTTTTGGAARVLTWMERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCSDIDF 784 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143 ++ + T + R S + L W + DI Sbjct: 785 ANEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANMGRAVWEALMAAGAEFDITP 844 Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 Y H LR G + D ++ PHD M G+ ++G+ ++R Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGSVTPHDLGM---GGLVAKTKDFLGRRSLARSDTTK 900 Query: 199 IIRKRPMIITGTDD--LPPSGSPILT 222 RK+ + + D + P GS I+ Sbjct: 901 DNRKQFVGLLSDDPQFVIPEGSQIVA 926 >gi|254500876|ref|ZP_05113027.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11] gi|222436947|gb|EEE43626.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11] Length = 383 Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 55/306 (17%) Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66 + G L+A+ ++ + L + R + +L G I+ ++++ ++ + Sbjct: 66 LIGPDHETTAKALEALTPSNFVELGHGRQRYTVLLNEDGGIIDDLMVTRPLDKNDDGRLL 125 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L ++ +++D L L V +E+ ++ E Sbjct: 126 LVVNAARKDIDYAHLRA-NLPDTVKLEVADDRALIAVQGPEAVAAVAAHAPAAAELGFMA 184 Query: 110 ------------FSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150 + + + E V + +D + LR+ Sbjct: 185 AAPMEFDGIACHIARAGYTGEDGVEMSVPAGAAEAIARALLADDRVEAIGLGARDSLRLE 244 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIIT 208 G+ D T P + + + +G ++G E + + R R + + Sbjct: 245 AGLCLYGHDI-DETTSPVEGNITFCMQKRRRDEGGFLGAERIQKELADGTDRIRVGLRLD 303 Query: 209 GTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGV 262 G L D IG+L V A+ + + + L V Sbjct: 304 GKAPAREGAEIALPDGDVIGSLTSGGFAPTVGAPIAMGYVPAEHASEGTQ--LELIVRNR 361 Query: 263 RVKASF 268 R+ A+ Sbjct: 362 RLPATV 367 >gi|152967989|ref|YP_001363773.1| glycine cleavage system T protein [Kineococcus radiotolerans SRS30216] gi|151362506|gb|ABS05509.1| glycine cleavage system T protein [Kineococcus radiotolerans SRS30216] Length = 391 Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 95/329 (28%), Gaps = 83/329 (25%) Query: 6 LSNQSFIKVCGKS----------AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55 LS+ I+V G P + A ++ +G I+ Sbjct: 70 LSHMGEIRVSGPQAGAALDAALAGRP----------SAMAIGRAAYGLLVDHEGGIVDDL 119 Query: 56 LISKIEEDTFILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--- 108 + ++ E F++ + + + +L D+ + + + + +++ Sbjct: 120 VTYRLGEQEFLVVANAANVEPVVVALADRARPF----DAHVADETARWALVAVQGPASAA 175 Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY 144 + +VLL RT E + + + Sbjct: 176 IVGPLVDADLTALGYYRCAPATLTTGPGAPGVEVLLARTGYTGEDGFEVFVPVDDAVAAW 235 Query: 145 HE--------------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184 LR+ G+ + +T P A + + + G Sbjct: 236 DALLAATREHGGVPAGLACRDTLRLEAGMPLYGHELTTATS-PFAAGLGRVVKLDKDPGP 294 Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL---- 239 +G E + R+ R + + GT P +G P++ +G + L Sbjct: 295 -VGLEALQRLAATPPAR-VLVGLRGTGRRAPRAGYPVVAGGSPVGEVTSGALSPTLGYPV 352 Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASF 268 A+A +D A +A+ V G + Sbjct: 353 AMAYVDAALSAPGTALAVDVRGTELPVEV 381 >gi|294012768|ref|YP_003546228.1| aminomethyltransferase [Sphingobium japonicum UT26S] gi|292676098|dbj|BAI97616.1| aminomethyltransferase [Sphingobium japonicum UT26S] Length = 389 Score = 39.4 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 100/315 (31%), Gaps = 62/315 (19%) Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 S+ + G+ A+ L + +D+ L R S +L +G IL ++S++ + Sbjct: 70 SHMGQLGFSGEGVDDALEIL---LPSDIKGLKPFRQRYSMLLDEEGGILDDLMVSRLGDG 126 Query: 64 TF-----ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 F + ++ + + + ++ + L V++ ++ E + ++ I E Sbjct: 127 AFGGADIYMVVNGATKYDDMGWMIEH-LPDEVVMNHMDEQALLALQGPEAGEALATLIPE 185 Query: 119 -------RFSIADVLLHRTWGHNEKIASD-----------------------------IK 142 + + W + + Sbjct: 186 TADLIFMQSGLFTWRGVPLWISRSGYTGEDGFEISVPAADAALLADALCALPQVKPIGLG 245 Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNI 199 LR+ G+ D P+ DL I + G +IG V + Sbjct: 246 ARDSLRLEAGLPLYGHDLTPAVS---TIGADLGFAIQKRRREEGGFIGHARVMKELADGP 302 Query: 200 IRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKK 253 KR + + LP G+PI +G + VG +A+ + AI Sbjct: 303 GSKR-VGLRIQGRLPAREGAPIFAGGARVGEVTSGGFAPTVGAP-IAMGWVSLPHSAIGA 360 Query: 254 GMALTVHGVRVKASF 268 + + V G R+ A Sbjct: 361 ALEIEVRGKRIAAEV 375 >gi|152996771|ref|YP_001341606.1| sarcosine oxidase subunit alpha family protein [Marinomonas sp. MWYL1] gi|150837695|gb|ABR71671.1| sarcosine oxidase, alpha subunit family [Marinomonas sp. MWYL1] Length = 1010 Score = 39.4 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + GK A FL + T LP R + G + + S + E+ F+ Sbjct: 676 STLGKIDIQGKDAREFLGRVYTNAWAKLPVGKCRYGLMCGEDGMVFDDGVTSCLAENHFL 735 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ L Y Sbjct: 736 MTTTSGGAARVLSWLEIY 753 >gi|332186698|ref|ZP_08388441.1| sarcosine oxidase, alpha subunit [Sphingomonas sp. S17] gi|332013350|gb|EGI55412.1| sarcosine oxidase, alpha subunit [Sphingomonas sp. S17] Length = 993 Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 95/326 (29%), Gaps = 70/326 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ L R +L G +L ++ ++ D F Sbjct: 663 STLGKIEVVGPDAAEFMNRFFVNAWTKLGVGKCRYGVLLREDGFVLDDGVVGRLAADRFH 722 Query: 67 LEIDRSKRDSLIDKLLFYKL-------------------------RSNVIIEIQPINGVV 101 + +++ + Y R+ +I I G+ Sbjct: 723 VTTTTGGAARVLNMMEDYLQTEWPNLNVWLTSTTEQWSVIAVQGPRAREVIAPL-IEGLD 781 Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK------------------------- 136 +S F + S D R + L R E Sbjct: 782 VS---AEAFPHMSIADARICGVPMRLMRVSFTGELGFEVNVPSGYGRMVWEAIWERGKTC 838 Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194 +A +T H LR G + + T+ P D + I K ++G+ ++R Sbjct: 839 DMVAYGTETMHVLRAEKGYIIVGQE-TDGTVTPDDVGLSW--AIGKAKPDFVGKRSLARP 895 Query: 195 QHRNIIRKRPMIITGTDD--LPPSGSPILTD---DIEIGTLGVVV------GKKALAIAR 243 RK+ + + D + G+ ++ IG + ALA+ R Sbjct: 896 AMAAPDRKQLVGLRSKDGRSVLEEGAQVVAPSAPGTPIGHVTSSYYSAVLDAPIALALVR 955 Query: 244 IDKVDHAIKKGMALTVHGVRVKASFP 269 + + + + V+ P Sbjct: 956 GGRARMGETLHIPMPGGAIPVEIVQP 981 >gi|316932873|ref|YP_004107855.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1] gi|315600587|gb|ADU43122.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1] Length = 382 Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 14/124 (11%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+A+I D++ LP R + G IL +++ + Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118 Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 D L ++ + +D+ L + L +I +Q + Sbjct: 119 -DRLFLVVNAACKDADEAHLRAHLADACDITALTDRALIALQGPKAEAALAKICADVTTM 177 Query: 114 SFID 117 F+D Sbjct: 178 KFMD 181 >gi|330505362|ref|YP_004382231.1| sarcosine oxidase subunit alpha family protein [Pseudomonas mendocina NK-01] gi|328919648|gb|AEB60479.1| sarcosine oxidase alpha subunit family protein [Pseudomonas mendocina NK-01] Length = 1005 Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 731 MTTTTGGAGRVMEWLEIY 748 >gi|331652072|ref|ZP_08353091.1| putative aminomethyltransferase [Escherichia coli M718] gi|331050350|gb|EGI22408.1| putative aminomethyltransferase [Escherichia coli M718] Length = 386 Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISATELIAS 119 >gi|293414320|ref|ZP_06656969.1| aminomethyltransferase [Escherichia coli B185] gi|291434378|gb|EFF07351.1| aminomethyltransferase [Escherichia coli B185] Length = 386 Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ S + V G A + +++ADV + + A S +L +G I + + ++ Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106 Query: 67 LEIDRSKRDSLID 79 L D S + + Sbjct: 107 LSEDISATELIAS 119 >gi|91976211|ref|YP_568870.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas palustris BisB5] gi|91682667|gb|ABE38969.1| glycine cleavage system T protein [Rhodopseudomonas palustris BisB5] Length = 382 Score = 39.4 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G A L+ ++ D+ LP R + G IL +++ + Sbjct: 59 SHMGQIELRAKSGKLDDAARALERLVPQDIAALPPGRQRYAQFTNESGGILDDLMVTNLG 118 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 D L ++ + + L + L I P ++ + + F Sbjct: 119 -DRLFLVVNAACKAEDEAHLRAH-LSETCEITALPERALLALQGPKAEAALGHF 170 >gi|124266626|ref|YP_001020630.1| aminomethyltransferase [Methylibium petroleiphilum PM1] gi|124259401|gb|ABM94395.1| aminomethyltransferase [Methylibium petroleiphilum PM1] Length = 381 Score = 39.4 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 43/244 (17%) Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK---- 85 DVL L R + G +L ++++ E D +L ++ + +D+ + L + Sbjct: 87 DVLGLGVGKQRYAFFTNAGGGLLDDLMVTRREND-LLLIVNAACKDTDLHHLQAHIGHRC 145 Query: 86 ----LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-------------------------- 115 L ++ +Q V S +F Sbjct: 146 TVQPLPERALLALQGPKAVTALARLNPGVSALTFMTGGAFTLVGSDCYLTRSGYTGEDGF 205 Query: 116 -IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 I + A+ L E + + LR+ G+ D +T P +A + Sbjct: 206 EISVPATHAEALARELLAQPEVAPAGLGARDTLRLEAGLCLYGHDIHTATT-PIEAGLSW 264 Query: 175 -----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIG 228 G Y G V+ + +R +I G+ ++ + IG Sbjct: 265 AIQKVRRAGGARAGGYPGATVIDAQLAGGVSERRVGLIGLERVPVREGTELVDSQGHRIG 324 Query: 229 TLGV 232 + Sbjct: 325 RVTS 328 >gi|167042021|gb|ABZ06757.1| putative glycine cleavage T-protein (aminomethyl transferase) [uncultured marine microorganism HF4000_141F21] Length = 810 Score = 39.4 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEEDTFIL 67 ++ G +A FL ++ LP KI R L +G + F I K E++F L Sbjct: 494 RIKGPNAEEFLNKLVAN---KLPKKIGRINLCHALNTKGGVHSEFTIMKESENSFYL 547 >gi|254461083|ref|ZP_05074499.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2083] gi|206677672|gb|EDZ42159.1| Glycine cleavage T-protein (aminomethyl transferase) [Rhodobacteraceae bacterium HTCC2083] Length = 811 Score = 39.4 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 10/133 (7%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +R+ G + D L P + +D + KG +IGQ+ + + + R Sbjct: 671 DSMRMEKGFLHWKADLLTE-FDPFETALDRF--VWPEKGAFIGQKALKKRMAKGPTRSLV 727 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMAL 257 + + T G+ ++ D +GT+ VG A A + + K + L Sbjct: 728 TLKVDSTRTPAHGGASLMQGDTVVGTITSGDWGYRVGMNLAYAFVMPELAEAGCKMQLDL 787 Query: 258 TVHGVRVKASFPH 270 V + P Sbjct: 788 CGELVAAEVIAPS 800 >gi|220911657|ref|YP_002486966.1| glycine cleavage system aminomethyltransferase T [Arthrobacter chlorophenolicus A6] gi|219858535|gb|ACL38877.1| glycine cleavage system T protein [Arthrobacter chlorophenolicus A6] Length = 382 Score = 39.4 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 31/152 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59 LS+ + V G +A FL D + +P A+ S I G I+ + + Sbjct: 50 LSHMGEVWVTGPAAAAFL------DYALVGRISAMPVGKAKYSLICDTDGGIIDDLITYR 103 Query: 60 I-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 D F++ + + V+ E E + +S Sbjct: 104 RPSPAEGGDRFLVVPNAGN--------------AKVVAEALQERAAGFDVAVEDASAETS 149 Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146 I + A LL R N+ Y+ Sbjct: 150 LIAVQGPKAQDLLLRLVPANQHPDVAGLKYYA 181 >gi|260462814|ref|ZP_05811019.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] gi|259031458|gb|EEW32729.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] Length = 957 Score = 39.4 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ + + TL R +L+ G + ++ +++E F+ Sbjct: 626 STLGKIEVIGPQAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFV 685 Query: 67 LEIDRSKRDSLIDKL 81 + S ++ +L Sbjct: 686 ISCSSSHVAAVHARL 700 >gi|324503085|gb|ADY41346.1| Dimethylglycine dehydrogenase [Ascaris suum] Length = 540 Score = 39.4 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V L+ + I+V G +I L ++T V L S +LT +G IL F I + Sbjct: 421 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 478 Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103 + FIL D + + L V I I L+ Sbjct: 479 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLA 524 >gi|146309143|ref|YP_001189608.1| sarcosine oxidase alpha subunit family protein [Pseudomonas mendocina ymp] gi|145577344|gb|ABP86876.1| sarcosine oxidase, alpha subunit family [Pseudomonas mendocina ymp] Length = 1005 Score = 39.4 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L AR + G + + + + ++ F+ Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 731 MTTTTGGAGRVMEWLEIY 748 >gi|324503711|gb|ADY41607.1| Dimethylglycine dehydrogenase [Ascaris suum] Length = 540 Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 + V L+ + I+V G +I L ++T V L S +LT +G IL F I + Sbjct: 421 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 478 Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103 + FIL D + + L V I I L+ Sbjct: 479 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLA 524 >gi|167584134|ref|ZP_02376522.1| sarcosine oxidase, alpha subunit family protein [Burkholderia ubonensis Bu] Length = 1003 Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 84/274 (30%), Gaps = 56/274 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWGKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109 + ++ L K+R ++V + VV + Q+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784 Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 F N +F + R + N + + Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR G + D ++ P+D M G+ ++G+ +SR Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229 RK+ + + D+ + P G+ I+ D ++ T Sbjct: 901 KEGRKQFVGLLTDDEQFVLPEGAQIVAKDTQVST 934 >gi|118588265|ref|ZP_01545674.1| sarcosine dehydrogenase [Stappia aggregata IAM 12614] gi|118438971|gb|EAV45603.1| sarcosine dehydrogenase [Stappia aggregata IAM 12614] Length = 827 Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 52/266 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 ++ G A FL ++T + + + +L GK++ F I++ + TF + S Sbjct: 511 EITGPGAESFLSLLMTNTMPKV--GRIVLTPMLNENGKLIGDFTIARASDQTFYMW-GSS 567 Query: 73 KRDS-----LIDKLLFYK---LRS----------------NV--IIEIQPINGVVLSWNQ 106 + + L +R+ V I ++G + Sbjct: 568 QAEIYHMRWFEKHLPEDGSVTIRAINLGWVGLSIAGPNSRKVLEKITGDDVSGEAFRFMD 627 Query: 107 --EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------L 147 E +N+ R + L + W E + + ++ L Sbjct: 628 FREMDVANAPCKVNRITYTGDLGYEIWMAPEYQRQVYDALMTAGAEFNIVNFGMRALLCL 687 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MI 206 R+ +F P P +A + + L+K +IG++ + R R + Sbjct: 688 RLEKNFGTWFREFRP-IYGPFEADLGRF--VKLSKDAFIGKDAAQKEFDEGPKRLRVSFV 744 Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV 232 + +D P+ D IG + Sbjct: 745 VDASDADVMGDEPVWHDGKVIGWVTS 770 >gi|46202678|ref|ZP_00052785.2| COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Magnetospirillum magnetotacticum MS-1] Length = 458 Score = 39.0 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 34/72 (47%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G +L I+++ E +++ Sbjct: 224 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFVLDDGTIARLAETHYVMTAST 283 Query: 72 SKRDSLIDKLLF 83 + ++ L F Sbjct: 284 ANAAKVMQHLEF 295 >gi|114326744|ref|YP_743901.1| sarcosine oxidase alpha subunit [Granulibacter bethesdensis CGDNIH1] gi|114314918|gb|ABI60978.1| sarcosine oxidase alpha subunit [Granulibacter bethesdensis CGDNIH1] Length = 995 Score = 39.0 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 85/265 (32%), Gaps = 51/265 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL + L R +L G I +I +I +D F Sbjct: 664 STLGKIEVVGPDAAEFLNRLYVNAWDKLKPGKCRYGLLLREDGFITDDGVIGRIAQDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQ-----PINGVVLSWNQE 107 + S ++ + Y+ L S +I +Q I ++ Sbjct: 724 VTTTTSGAPRVLAMMEDYRQTEWPELNVWLTSTTEQWAVIAVQGPKARDIIAPLIEGVDL 783 Query: 108 HTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASD---------------------- 140 + F++ S D + L R G+ + +D Sbjct: 784 NDFAHMSVADATIAGVPGRLFRVSFTGELGYELNVPADYGRAIWEAVYERGQDFGIVPYG 843 Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 +T H LR G V + T P D + I K ++G+ + R ++ Sbjct: 844 TETMHVLRAEKGYVIVGQE-TDGTATPDDVGLAW--AIGKAKKDFVGKRSLERTSMKDPN 900 Query: 201 RKRPMIITGTDDL--PPSGSPILTD 223 RK+ + + D G+ I+ D Sbjct: 901 RKQLVGLLTDDPAIVLEEGAQIVAD 925 >gi|302188791|ref|ZP_07265464.1| aminomethyltransferase [Pseudomonas syringae pv. syringae 642] Length = 968 Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 102/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 F V L G ++ + H LR+ +V+ F Sbjct: 760 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ + Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 940 PIRVE-DGVVVQATV 953 >gi|183984391|ref|YP_001852682.1| aminomethyltransferase GcvT_2 [Mycobacterium marinum M] gi|183177717|gb|ACC42827.1| aminomethyltransferase GcvT_2 [Mycobacterium marinum M] Length = 814 Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 +V G A+ LQ + T D+ + +L G I ++++ F Sbjct: 507 EVSGAGAVDLLQRLTTNDIDK-GVGSVTYTLMLDETGGIRSDLTVARLGTARF 558 >gi|326794962|ref|YP_004312782.1| sarcosine oxidase subunit alpha family [Marinomonas mediterranea MMB-1] gi|326545726|gb|ADZ90946.1| sarcosine oxidase, alpha subunit family [Marinomonas mediterranea MMB-1] Length = 1005 Score = 39.0 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + GK A FL + T L R + G + + S + E+ F+ Sbjct: 671 STLGKIDIQGKDAREFLGRVYTNAWAKLAVGKCRYGLMCGEDGMVFDDGVTSCLGENHFL 730 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ L Y Sbjct: 731 MTTTSGGAAHVLEWLELY 748 >gi|320354821|ref|YP_004196160.1| glycine cleavage T protein (aminomethyl transferase) [Desulfobulbus propionicus DSM 2032] gi|320123323|gb|ADW18869.1| glycine cleavage T protein (aminomethyl transferase) [Desulfobulbus propionicus DSM 2032] Length = 429 Score = 39.0 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 8/83 (9%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT--------LPYKIARGSAILTPQGKILLYFLIS 58 S+ + + + G + LQ + D+ L L G ++ ++ Sbjct: 54 SHMAVLTLHGPAVRELLQRCFSKDLEQCIGPGKGPLVPGRCVYGVFLDDNGWVIDDAIVY 113 Query: 59 KIEEDTFILEIDRSKRDSLIDKL 81 + E ++L ++ + + L Sbjct: 114 QCGETDYMLVVNAAMGGPVSAHL 136 >gi|154244817|ref|YP_001415775.1| sarcosine oxidase alpha subunit family protein [Xanthobacter autotrophicus Py2] gi|154158902|gb|ABS66118.1| sarcosine oxidase, alpha subunit family [Xanthobacter autotrophicus Py2] Length = 1003 Score = 39.0 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I L L R +L G I +++++ D F Sbjct: 661 STLGKIEVKGPDAAEFLNRIYPNAWLKLEPGKCRYGLMLKEDGFIFDDGVVARLAPDLFH 720 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 721 VTTTTGGAPRVLAHMEDY 738 >gi|254451414|ref|ZP_05064851.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238] gi|198265820|gb|EDY90090.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238] Length = 973 Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + TL R +L G ++ +++ + Sbjct: 638 CDVSTLGKIDIAGPDAAAFLDFVYCNTFSTLKENRVRYGLMLREDGHVMDDGTTARLGAN 697 Query: 64 TFILEIDRSKRDSLIDKL 81 +++ + ++ L Sbjct: 698 HYVMTTTTAAAGQVMKHL 715 >gi|329896457|ref|ZP_08271535.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma proteobacterium IMCC3088] gi|328921775|gb|EGG29147.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma proteobacterium IMCC3088] Length = 369 Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 90/292 (30%), Gaps = 47/292 (16%) Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82 L+A++ AD+ L S + G ++ ++++ D F+L I+ +D ++ L Sbjct: 68 LEALMPADLEGLAVNAQTYSLLTNEAGGVIDDLIVTRWAADQFMLVINAGCKDKDLEHLR 127 Query: 83 FY--------------------KLRS---NVIIEIQPINGVVLSWNQEH----------- 108 + K R+ +++ E Q + + +W Q Sbjct: 128 SHLASVNLEVLSQHSLLALQGPKARAVMNDLLPETQNLVFMTGTWAQFEGEQVYVTCSGY 187 Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 T + I S + L + H + + + LR+ G+ + I P Sbjct: 188 TGEDGFEISVPNSHVEALAQKLLAHADVLPIGLGARDSLRLEAGLCLYGHELE-EDISPI 246 Query: 169 DALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLPPSGSPILT 222 A + G Y+G ++ R + + G + Sbjct: 247 QAGLKWAIAKARRHEGARAGGYLGSAIIEAQWAEGTDTVRVGLKVLGKRPVREGAVVFDA 306 Query: 223 DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 ++GT+ A+A D+ + V V+ + Sbjct: 307 QQQQVGTVCSGGFGATLEQPVAMAYVNADQAALGTHLFADVRGKLVEVEVAK 358 >gi|126738770|ref|ZP_01754466.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. SK209-2-6] gi|126719951|gb|EBA16658.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp. SK209-2-6] Length = 981 Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + T L R +L G I+ +++ E Sbjct: 646 CDVSTLGKIDIQGADAGKFLDFVYTNGFSKLKVGKTRYGLMLREDGFIMDDGTTARLGEH 705 Query: 64 TFILEIDRSKRDSLIDKLLF 83 +++ + ++ L F Sbjct: 706 HYVMTTTTAAAGQVMAHLEF 725 >gi|326676315|ref|XP_002665475.2| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial-like [Danio rerio] Length = 885 Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 G A+ LQ + D+ +P + +L +G + ++ +++F + + Sbjct: 544 SGDQALHLLQRLCANDLD-VPVGHIVHTGMLNARGGYENDCSVVRLSKNSFFIISPTDQ 601 >gi|213971226|ref|ZP_03399343.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|301383925|ref|ZP_07232343.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato Max13] gi|302061522|ref|ZP_07253063.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato K40] gi|302131036|ref|ZP_07257026.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923979|gb|EEB57557.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato T1] Length = 968 Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + + G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759 Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 + I R + + + +K + Sbjct: 760 LSAEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVAARHALKLWDALSEAGKAFDMR 819 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G V + D P + M +S TK ++G+ V ++ Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRAVDILEAL 876 Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250 RK + LP G +L G + + +A A D+ Sbjct: 877 PQKRKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCENSQTLDMIIGMAYAAFDQSTPG 936 Query: 251 IKKGMALTVHGVRVKASF 268 + + + GV V+A+ Sbjct: 937 QQIPIRVE-DGVVVQATV 953 >gi|239916847|ref|YP_002956405.1| aminomethyltransferase [Micrococcus luteus NCTC 2665] gi|281414692|ref|ZP_06246434.1| aminomethyltransferase [Micrococcus luteus NCTC 2665] gi|239838054|gb|ACS29851.1| aminomethyltransferase [Micrococcus luteus NCTC 2665] Length = 388 Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 22/146 (15%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ ++V G A L A+ + + TL A+ + LT G IL ++ ++++ Sbjct: 52 LSHMGEVRVTGPEAGAMLDHALSSV-LSTLKPGRAKYALCLTDAGTILDDTIVYRMDDGE 110 Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 +++ + ++ L + VV E S ++ + Sbjct: 111 AGSEPDYLVVPNAGNIAAVHTALNQ---------RASGWDAVV-----EDESSTTALVAV 156 Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY 144 + A+ +L R +++K Y Sbjct: 157 QGPQAERILARAMPEAAAQLAELKYY 182 >gi|321254109|ref|XP_003192968.1| aminomethyltransferase, mitochondrial precursor [Cryptococcus gattii WM276] gi|317459437|gb|ADV21181.1| aminomethyltransferase, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 410 Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%) Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74 G +A FL + + + +L + S +L QG I+ +I+K + +F + + + Sbjct: 88 TGPTAQEFLLTLCPSSLDSLTPFTSTLSVLLNEQGGIIDDTIITKHSDTSFYVVTNAGRA 147 Query: 75 DSLIDKLL 82 D + Sbjct: 148 DEDKAHIT 155 >gi|167577637|ref|ZP_02370511.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis TXDOH] Length = 1002 Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|91787747|ref|YP_548699.1| glycine cleavage system T protein [Polaromonas sp. JS666] gi|91696972|gb|ABE43801.1| glycine cleavage system T protein [Polaromonas sp. JS666] Length = 398 Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60 S+ +++ G + L+ ++ DV+ LP R +L G I+ + Sbjct: 71 SHMGQLRLVGPDSAAALETLLPVDVIDLPAGKQRYGLLLNDDGGIIDDLMFFNRNMHDSA 130 Query: 61 -EEDTFIL 67 D F++ Sbjct: 131 NGGDLFLI 138 >gi|167840012|ref|ZP_02466696.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis MSMB43] Length = 520 Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E F+ Sbjct: 183 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 242 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 243 MTTTTGGAARVLTWLER 259 >gi|83717636|ref|YP_439195.1| sarcosine oxidase subunit alpha [Burkholderia thailandensis E264] gi|167615778|ref|ZP_02384413.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis Bt4] gi|257142316|ref|ZP_05590578.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis E264] gi|83651461|gb|ABC35525.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis E264] Length = 1002 Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ E F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|158425869|ref|YP_001527161.1| glycine cleavage system T protein [Azorhizobium caulinodans ORS 571] gi|158332758|dbj|BAF90243.1| glycine cleavage system T protein [Azorhizobium caulinodans ORS 571] Length = 387 Score = 39.0 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 42/245 (17%) Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISK----IEEDTFILEIDRSKRDSLIDKLLFY 84 AD+L L R S +L G IL ++++ ++ T +L ++ + + + Sbjct: 84 ADILNLKPGQQRYSQLLAEDGGILDDLMVARPADPAQDGTLLLVVNAACKTDDYAHIAA- 142 Query: 85 KLRSNVIIEIQPINGVVLSWNQEH-----------------------------TFSNSSF 115 +L + V + ++ + S S + Sbjct: 143 RLPAGVTLVTHEDRALLALQGPKAVEVMARHAPGAADMAFMTVLVTTYDGLPIAISRSGY 202 Query: 116 IDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 E + A+ L + + + LR+ G+ D +T Sbjct: 203 TGEDGYEISVANADAETLWTKLLAEPDVKPIGLGARDSLRLEAGLCLYGHDIDTTTSPVE 262 Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEI 227 AL+ + G + G E + R R R + G+ I D + Sbjct: 263 GALVWSIQKRRREDGGFPGAERIQRELKDGPARLRVGLAFEGRAPAREGAEIATKDGTIV 322 Query: 228 GTLGV 232 G + Sbjct: 323 GRVTS 327 >gi|313668940|ref|YP_004049224.1| aminomethyltransferase [Neisseria lactamica ST-640] gi|313006402|emb|CBN87865.1| putative aminomethyltransferase [Neisseria lactamica 020-06] Length = 366 Score = 39.0 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGVNAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|194099194|ref|YP_002002284.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae NCCP11945] gi|240017108|ref|ZP_04723648.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae FA6140] gi|240116189|ref|ZP_04730251.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae PID18] gi|254494202|ref|ZP_05107373.1| glycine cleavage system T protein [Neisseria gonorrhoeae 1291] gi|268601852|ref|ZP_06136019.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID18] gi|193934484|gb|ACF30308.1| aminomethyltransferase [Neisseria gonorrhoeae NCCP11945] gi|226513242|gb|EEH62587.1| glycine cleavage system T protein [Neisseria gonorrhoeae 1291] gi|268585983|gb|EEZ50659.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID18] Length = 366 Score = 39.0 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|59801751|ref|YP_208463.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae FA 1090] gi|239999484|ref|ZP_04719408.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae 35/02] gi|240014661|ref|ZP_04721574.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae DGI18] gi|240081253|ref|ZP_04725796.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae FA19] gi|240113464|ref|ZP_04727954.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae MS11] gi|240118473|ref|ZP_04732535.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae PID1] gi|240121183|ref|ZP_04734145.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae PID24-1] gi|240124016|ref|ZP_04736972.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae PID332] gi|240126362|ref|ZP_04739248.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae SK-92-679] gi|240128681|ref|ZP_04741342.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae SK-93-1035] gi|260439998|ref|ZP_05793814.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae DGI2] gi|268595296|ref|ZP_06129463.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae 35/02] gi|268597363|ref|ZP_06131530.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae FA19] gi|268599538|ref|ZP_06133705.1| glycine cleavage system T protein [Neisseria gonorrhoeae MS11] gi|268604183|ref|ZP_06138350.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID1] gi|268682641|ref|ZP_06149503.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID332] gi|268684947|ref|ZP_06151809.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-92-679] gi|268687068|ref|ZP_06153930.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-93-1035] gi|291043288|ref|ZP_06569011.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae DGI2] gi|293398606|ref|ZP_06642784.1| glycine cleavage system T protein [Neisseria gonorrhoeae F62] gi|59718646|gb|AAW90051.1| putative aminomethyltransferase [Neisseria gonorrhoeae FA 1090] gi|268548685|gb|EEZ44103.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae 35/02] gi|268551151|gb|EEZ46170.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae FA19] gi|268583669|gb|EEZ48345.1| glycine cleavage system T protein [Neisseria gonorrhoeae MS11] gi|268588314|gb|EEZ52990.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID1] gi|268622925|gb|EEZ55325.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID332] gi|268625231|gb|EEZ57631.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-92-679] gi|268627352|gb|EEZ59752.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-93-1035] gi|291012894|gb|EFE04877.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae DGI2] gi|291611077|gb|EFF40174.1| glycine cleavage system T protein [Neisseria gonorrhoeae F62] gi|317164732|gb|ADV08273.1| glycine cleavage system aminomethyltransferase T [Neisseria gonorrhoeae TCDC-NG08107] Length = 366 Score = 39.0 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|330942967|gb|EGH45444.1| aminomethyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 635 Score = 39.0 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 475 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 534 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 535 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 583 >gi|218885445|ref|YP_002434766.1| glycine cleavage system protein T [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756399|gb|ACL07298.1| glycine cleavage system T protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 362 Score = 39.0 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 + G A L ++ ++ TL R +L G IL ++ + ED ++L ++ + Sbjct: 59 TLRGPGARDALSRAVSHNLETLKPGRCRYGFLLNEAGGILDDLIVYCVAEDDYMLVVNGA 118 Query: 73 KRDSLIDKLL 82 +S L Sbjct: 119 CTESDFAALR 128 >gi|215259949|gb|ACJ64459.1| mitochondrial aminomethyltransferase [Culex tarsalis] Length = 291 Score = 39.0 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 31/61 (50%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 GK I +++ TADV L + +G IL +++++ +DT + + S+++ Sbjct: 1 GKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVADDTLYVVSNASRKE 60 Query: 76 S 76 + Sbjct: 61 T 61 >gi|319784832|ref|YP_004144308.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170720|gb|ADV14258.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 993 Score = 38.6 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 29/80 (36%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + L AR +L G + S++ ED Sbjct: 655 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 714 Query: 64 TFILEIDRSKRDSLIDKLLF 83 + L +K ++ L F Sbjct: 715 HYFLTTTTAKAGLVMQHLEF 734 >gi|222080880|ref|YP_002540243.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] gi|221725559|gb|ACM28648.1| glycine cleavage system T protein [Agrobacterium radiobacter K84] Length = 813 Score = 38.6 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 86/267 (32%), Gaps = 53/267 (19%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-IDR 71 ++ G A +L I+ + + S LT G + +++S++E+ F L R Sbjct: 498 EISGPGAEAWLDGILANRLPKV--GRVNLSHHLTRNGGVQAEYIVSRLEDGMFYLISTPR 555 Query: 72 SKR---DSLIDKLLFY---KLR----------------SNVI--IEIQPINGVVLSWNQE 107 ++R D L L +LR V+ + I+ W Sbjct: 556 AERWNFDDLSKLLPKDGTVQLRNATNERGCFTIVGPKAREVLQGLTEMDISNEAFPWFGV 615 Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--------------------SDIKTYHEL 147 + + D R + W + ++ L Sbjct: 616 KSGTVGLATDVRLLRVNYEGELGWELYHPLCYQRHLLEALLAAGAPHGLRLIGLQALESL 675 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207 R+ D P ++ +D I L KG +IG+E + R + + +++R + I Sbjct: 676 RLEKSYRAMYRDMNPELTAW-ESGLDRF--IRLDKGEFIGREALLRQKEQG-VKQRSVTI 731 Query: 208 TGTDDLPPS--GSPILTDDIEIGTLGV 232 + D S + + +G + Sbjct: 732 SIDTDGASSLIHEGVYRNGKLVGRITS 758 >gi|110677986|ref|YP_680993.1| dimethylglycine dehydrogenase, putative [Roseobacter denitrificans OCh 114] gi|109454102|gb|ABG30307.1| dimethylglycine dehydrogenase, putative [Roseobacter denitrificans OCh 114] Length = 811 Score = 38.6 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204 +R+ G + + L P + +D + K +IGQ+ + + IRK Sbjct: 671 DSMRMEKGFLHWKAELLTE-FDPFETGLDRF--VKPEKRPFIGQQALQKRMANGPIRKLV 727 Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 + I T G+ ++ D +GT+ + + Sbjct: 728 TLKIDCTTAPAHGGASLMQDGAVVGTITSGAWGYRVGL 765 >gi|82408428|gb|ABB73054.1| dimethylglycine oxidase [Arthrobacter globiformis] Length = 835 Score = 38.6 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 93/312 (29%), Gaps = 63/312 (20%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65 + V G A L + T ++ +L G I ++++ E+ F Sbjct: 517 LAVNGPGAQELLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEDFQLGVNS 575 Query: 66 -----ILEIDRSKRDSL--IDK------------------LLFYKLRSNVIIEIQPINGV 100 L ++ K+ + L + V + +G+ Sbjct: 576 NVDFDYLRVEARKQSAADPAKWVHVTDITGSTCCIGLWGPLAREVI-GKVSSDDLTNDGL 634 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143 +E + R S L + E IA+ Sbjct: 635 KYFRTKEISVGGIPVTAMRLSYVGELGWELYTTAEYGLKLWDLLFEAGREHGIIAAGRGA 694 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRK 202 ++ LR+ G TD P+ + + ++ K ++G E + +R + Sbjct: 695 FNSLRLEKGYRLWGTDMTTEH-HPYQSGLGFS--VAKDKVGFVGAEALAARKEQPAEKVL 751 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALT 258 R + + + P+ + G + + +A A + A+ +G A+ Sbjct: 752 RCLTVDDGTSIVLGKEPVYVGGVAAGYVTSAAYGYSIRKPIAYAWL---PAAVSEGDAVE 808 Query: 259 VH--GVRVKASF 268 + G RV A+ Sbjct: 809 IEYFGRRVAATV 820 >gi|260469714|ref|ZP_05813874.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] gi|259028497|gb|EEW29813.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] Length = 992 Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 29/80 (36%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + L AR +L G + S++ ED Sbjct: 654 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 713 Query: 64 TFILEIDRSKRDSLIDKLLF 83 + L +K ++ L F Sbjct: 714 HYFLTTTTAKAGLVMQHLEF 733 >gi|254246733|ref|ZP_04940054.1| Glycine cleavage system T protein [Burkholderia cenocepacia PC184] gi|124871509|gb|EAY63225.1| Glycine cleavage system T protein [Burkholderia cenocepacia PC184] Length = 372 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|254480770|ref|ZP_05094017.1| sarcosine oxidase, alpha subunit family [marine gamma proteobacterium HTCC2148] gi|214039353|gb|EEB80013.1| sarcosine oxidase, alpha subunit family [marine gamma proteobacterium HTCC2148] Length = 1004 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 83/268 (30%), Gaps = 54/268 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L L R +L G + + + + E+ ++ Sbjct: 669 STLGKIDIQGSDAAEFLNRVYTNGYLKLAAGKCRYGLMLKEDGMVFDDGVTACLAENHYL 728 Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNV--IIEI 94 + ++ L + K+ V I++ Sbjct: 729 MFTTTGGAAGVLSWLELWHQTEWPELNVFFTSATDHWATATITGPNARKVLEKVCDDIDL 788 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKI 137 + W + T ++ + R S L L+ + Sbjct: 789 SADAFKFMDWR-DGTVADVAARVFRISFTGELTFEVNVPAHHGRHVWEKLYEAGQEFDIT 847 Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 +T H LR G + D ++ P D M + G + +IG ++R + Sbjct: 848 PYGTETMHVLRAEKGFIIVGQD-TDGSMTPQDLNMGWVVGKN-KDFSFIGHRGLNREDCQ 905 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTD 223 RK+ + + D + P G+ I+ D Sbjct: 906 REDRKQLVGLKTLDPKTVLPEGAQIVVD 933 >gi|188580833|ref|YP_001924278.1| sarcosine oxidase subunit alpha [Methylobacterium populi BJ001] gi|179344331|gb|ACB79743.1| sarcosine oxidase, alpha subunit family [Methylobacterium populi BJ001] Length = 1009 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 81/250 (32%), Gaps = 67/250 (26%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++ Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGLILDDGTIARMGETHYVMTAST 738 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 + ++ L F + +++Q + V W Q A L R Sbjct: 739 ANAAKVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAG---------PRARDTLRR-- 786 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 IVDP D + FP A D+ G Sbjct: 787 ---------------------IVDPGFDI-SNDAFPFLACADVTVG-------------- 810 Query: 192 SRIQHRNIIRKRPMIITGTDDL-------PPSGS----PILTDDIEIGTLGVVVGKKALA 240 I R I+ + +L G I+ + G G +AL+ Sbjct: 811 ------GGIPARLFRISFSGELAYELAVPAAYGDAAWRAIMQAGLPYG--ITAYGSEALS 862 Query: 241 IARIDKVDHA 250 + RI+K A Sbjct: 863 VMRIEKGHAA 872 >gi|260575160|ref|ZP_05843161.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2] gi|259022782|gb|EEW26077.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2] Length = 1003 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A FL + T + TLP R + G + ++++I +DT++ Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTGVMSTLPVGKCRYGLMCNENGFLSDDGVVARISDDTWL 729 Query: 67 LEIDRSKRDSL 77 D + Sbjct: 730 CHTTSGGADRI 740 >gi|167723968|ref|ZP_02407204.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei DM98] Length = 531 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 194 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 253 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 254 MTTTTGGAARVLTWLER 270 >gi|167573131|ref|ZP_02366005.1| sarcosine oxidase, alpha subunit [Burkholderia oklahomensis C6786] Length = 1002 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|167566053|ref|ZP_02358969.1| sarcosine oxidase, alpha subunit [Burkholderia oklahomensis EO147] Length = 1002 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|229220685|ref|YP_622778.2| glycine cleavage system aminomethyltransferase T [Burkholderia cenocepacia AU 1054] gi|229220798|ref|YP_833793.2| glycine cleavage system aminomethyltransferase T [Burkholderia cenocepacia HI2424] Length = 372 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|126444992|ref|YP_001062947.1| sarcosine oxidase subunit alpha, heterotetrameric [Burkholderia pseudomallei 668] gi|126224483|gb|ABN87988.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia pseudomallei 668] Length = 1002 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|237507609|ref|ZP_04520324.1| sarcosine oxidase, subunit alpha [Burkholderia pseudomallei MSHR346] gi|234999814|gb|EEP49238.1| sarcosine oxidase, subunit alpha [Burkholderia pseudomallei MSHR346] Length = 1002 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|126455912|ref|YP_001075894.1| sarcosine oxidase subunit alpha [Burkholderia pseudomallei 1106a] gi|134282520|ref|ZP_01769224.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 305] gi|167820114|ref|ZP_02451794.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 91] gi|167849944|ref|ZP_02475452.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei B7210] gi|167906899|ref|ZP_02494104.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei NCTC 13177] gi|167915256|ref|ZP_02502347.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 112] gi|167923087|ref|ZP_02510178.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei BCC215] gi|242313017|ref|ZP_04812034.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106b] gi|254186673|ref|ZP_04893189.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254193887|ref|ZP_04900319.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei S13] gi|254301642|ref|ZP_04969086.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 406e] gi|254356626|ref|ZP_04972901.1| sarcosine oxidase, alpha subunit [Burkholderia mallei 2002721280] gi|126229680|gb|ABN93093.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106a] gi|134246077|gb|EBA46167.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 305] gi|148025653|gb|EDK83776.1| sarcosine oxidase, alpha subunit [Burkholderia mallei 2002721280] gi|157810902|gb|EDO88072.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 406e] gi|157934357|gb|EDO90027.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|169650638|gb|EDS83331.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei S13] gi|242136256|gb|EES22659.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106b] Length = 1002 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|53722393|ref|YP_111378.1| sarcosine oxidase alpha subunit [Burkholderia pseudomallei K96243] gi|76818599|ref|YP_335552.1| putative sarcosine oxidase subunit alpha [Burkholderia pseudomallei 1710b] gi|167742939|ref|ZP_02415713.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei 14] gi|226199029|ref|ZP_03794591.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|254183760|ref|ZP_04890352.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1655] gi|254263647|ref|ZP_04954512.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1710a] gi|52212807|emb|CAH38839.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei K96243] gi|76583072|gb|ABA52546.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei 1710b] gi|184214293|gb|EDU11336.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1655] gi|225928804|gb|EEH24829.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|254214649|gb|EET04034.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1710a] Length = 1002 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|170731514|ref|YP_001763461.1| glycine cleavage system aminomethyltransferase T [Burkholderia cenocepacia MC0-3] gi|238688541|sp|B1JSZ4|GCST_BURCC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|169814756|gb|ACA89339.1| glycine cleavage system T protein [Burkholderia cenocepacia MC0-3] Length = 372 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I V L A S +L PQG ++ ++ E+ F Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 112 RVVVNAGTAE 121 >gi|217425307|ref|ZP_03456801.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 576] gi|217391558|gb|EEC31586.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 576] Length = 1002 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|167898550|ref|ZP_02485951.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 7894] Length = 1002 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 725 MTTTTGGAARVLTWLER 741 >gi|261401046|ref|ZP_05987171.1| glycine cleavage system T protein [Neisseria lactamica ATCC 23970] gi|269209057|gb|EEZ75512.1| glycine cleavage system T protein [Neisseria lactamica ATCC 23970] Length = 366 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62 S+ V G +A F + +I DV L + A SA+L G ++ ++ + E Sbjct: 52 SHMLVTDVAGANAKVFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108 >gi|105894640|gb|ABF77805.1| glycine cleavage system T protein [Burkholderia cenocepacia AU 1054] gi|116646259|gb|ABK06900.1| glycine cleavage system T protein [Burkholderia cenocepacia HI2424] Length = 401 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G F + I V L A S +L PQG ++ ++ E+ F Sbjct: 81 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 140 Query: 66 ILEIDRSKRD 75 + ++ + Sbjct: 141 RVVVNAGTAE 150 >gi|331697182|ref|YP_004333421.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326951871|gb|AEA25568.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190] Length = 369 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 54/145 (37%), Gaps = 8/145 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ ++ G A L +T + + A+ S + G +L ++ ++ E+ F Sbjct: 55 LSHMGEVEFEGPQAGAALDHALTGAMSAMRVGRAKYSLLCADDGGVLDDLVVYRLAEERF 114 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 ++ ++ + + +L R+ +V + + + +++ + ++ Sbjct: 115 LVVVNAANAGADATELAR---RAEGFDVRVRDRSADTALVAVQGPRAAEIVRGLVPDPAV 171 Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL 147 D L R + + I+ Sbjct: 172 VDEL--RYYAATPAAVAGIEILLAR 194 >gi|301629455|ref|XP_002943855.1| PREDICTED: hypothetical protein LOC100488488 [Xenopus (Silurana) tropicalis] Length = 829 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 1/110 (0%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +K+ G A + ++ DV+ LP R +L G I+ + DT Sbjct: 509 SHMGQLKLVGPGAAAAFETLVPVDVIGLPEGKQRYGLLLNDAGGIIDDLMFFNQGGDTLF 568 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 + ++ + + + + ++ + P G++ + + S + Sbjct: 569 VIVNGACKAGDVAHIQA-RIGDRCRVLPMPDYGLLALQGPQAATALSRLV 617 >gi|239906460|ref|YP_002953201.1| aminomethyltransferase [Desulfovibrio magneticus RS-1] gi|239796326|dbj|BAH75315.1| aminomethyltransferase [Desulfovibrio magneticus RS-1] Length = 362 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 66/302 (21%) Query: 13 KVCGKSAIPFLQAI---ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + G A QA+ +T D+ TL R +L G ++ +I + D ++L + Sbjct: 58 TLSGDGAA---QALGKAVTHDLATLAPGKCRYGFLLNENGGVIDDLIIYCLGVDDYMLVV 114 Query: 70 DRSKR----DSLIDKL----LFYKLRSN-VIIEIQ-PINGVVLSWNQEHTFSN---SSFI 116 + S+ +++ +L F + + I++Q P+ VL FS +F+ Sbjct: 115 NGSRIVVDFETIKGRLPAGSNFRNVSAETAKIDLQGPLAFEVLRDRLPGDFSGLKYFNFV 174 Query: 117 DERFSIADVLLHRTWGHNE-------KIASDIKTYHE-----------------LRINHG 152 F +++ RT E + + + +R+ G Sbjct: 175 WTDFQGVKMMVSRTGYTGELGYELFLPASHAVALWEAITADPRVAPAGLGARDTIRLEMG 234 Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-----IRKRPMII 207 D P +A L + S + +R++ + + Sbjct: 235 YPLYGQDL-DEEHTPAEAGYGWL--------------LTSPADYVGKGKAAGLRQKLIGL 279 Query: 208 TGTDDLPPSGSPILTD--DIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRV 264 + D +G + +L + VD + + V RV Sbjct: 280 EIPGRRSARHGDAVCDKSGKTVGVVTSASFAPSLGHAVALAYVDASAAEAKDFVVKAARV 339 Query: 265 KA 266 + Sbjct: 340 EL 341 >gi|226291388|gb|EEH46816.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb18] Length = 534 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52 L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L Sbjct: 278 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 336 Query: 53 LYFLISKIEEDTFILEIDRS 72 + ED F + I Sbjct: 337 IS-RTGYTGEDGFEISIPTD 355 >gi|77358750|ref|YP_338415.1| sarcosine oxidase, alpha subunit, truncation [Burkholderia mallei ATCC 23344] gi|66967548|gb|AAY59105.1| sarcosine oxidase, alpha subunit, truncation [Burkholderia mallei ATCC 23344] Length = 889 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 552 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 611 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 612 MTTTTGGAARVLTWLER 628 >gi|67640590|ref|ZP_00439391.1| sarcosine oxidase, subunit alpha [Burkholderia mallei GB8 horse 4] gi|166999516|ref|ZP_02265353.1| sarcosine oxidase, alpha subunit [Burkholderia mallei PRL-20] gi|254200377|ref|ZP_04906742.1| sarcosine oxidase, alpha subunit [Burkholderia mallei FMH] gi|254204402|ref|ZP_04910755.1| sarcosine oxidase, alpha subunit [Burkholderia mallei JHU] gi|147747989|gb|EDK55064.1| sarcosine oxidase, alpha subunit [Burkholderia mallei FMH] gi|147753988|gb|EDK61052.1| sarcosine oxidase, alpha subunit [Burkholderia mallei JHU] gi|238521337|gb|EEP84789.1| sarcosine oxidase, subunit alpha [Burkholderia mallei GB8 horse 4] gi|243064358|gb|EES46544.1| sarcosine oxidase, alpha subunit [Burkholderia mallei PRL-20] Length = 892 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 555 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 614 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 615 MTTTTGGAARVLTWLER 631 >gi|167828490|ref|ZP_02459961.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 9] Length = 541 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 204 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 263 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ L Sbjct: 264 MTTTTGGAARVLTWLER 280 >gi|325117544|emb|CBZ53096.1| glycine cleavage T-protein domain containing protein [Neospora caninum Liverpool] Length = 1872 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKI 60 + V G+ + L +++ D+ + A+ + +L +G IL ++K+ Sbjct: 1152 RRVWHVHGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLILDDCFVAKL 1204 >gi|156121039|ref|NP_001095666.1| obscurin [Bos taurus] gi|154425668|gb|AAI51373.1| MGC166429 protein [Bos taurus] gi|296486223|gb|DAA28336.1| hypothetical protein LOC537193 [Bos taurus] Length = 813 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTF 65 ++ V G+ A IT + PY R A+LTP GK +S+ Sbjct: 321 RAMPFVDGEDA------QITCTIEGAPYPQIRWYKDGALLTPGGKYQT---LSEPRSGLL 371 Query: 66 ILEIDRSKRDSL 77 +LEI + + L Sbjct: 372 VLEIRAAGTEDL 383 >gi|156083058|ref|XP_001609013.1| glycine cleavage T-protein (aminomethyl transferase) domain containing protein [Babesia bovis T2Bo] gi|154796263|gb|EDO05445.1| glycine cleavage T-protein (aminomethyl transferase) domain containing protein [Babesia bovis] Length = 732 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 11/141 (7%) Query: 121 SIADVLLHRTWGHNEKI-ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179 A L +T ++E + + Y R+ GI+ + D ++ L+ Sbjct: 407 PGAIRALAKTLANHELVLPAGFTVYDAARMEAGIMRTDVDIPTEASPIQTSVTWSLDMKR 466 Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVGKK 237 L G G+ + + + R +++ +++ + IL +D IG + + Sbjct: 467 LRYGTMFGKPHIIAQMTNGVAKVRVGVMS--NEMLTTDCYILKEDTRKPIGFITSSTWSQ 524 Query: 238 AL------AIARIDKVDHAIK 252 L A + H + Sbjct: 525 GLQMYLSQAYVNTEHARHDMT 545 >gi|110679550|ref|YP_682557.1| putative dimethyl sulfoniopropionate demethylase [Roseobacter denitrificans OCh 114] gi|109455666|gb|ABG31871.1| aminomethyl transferase family protein, putative [Roseobacter denitrificans OCh 114] Length = 367 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 95/311 (30%), Gaps = 72/311 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + D+ + I+ G +L + K+ ED + + I Sbjct: 64 VELRGPDAARLMQMLTPRDLRGMLPGRCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 123 Query: 72 SKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117 S L+ + Y+L +V+I+ ++ + + + + F D Sbjct: 124 S---DLLLWVKGISNGYRL--DVLIDEPDVSPLAIQGPKADELAARIFGDSIRDIKFFRF 178 Query: 118 ------------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------ 147 R + + IA + + L Sbjct: 179 GLFEFEGREMVVARSGYSKQGGFEVYVEGSDIAMPL--WDALFKAGEDLNVRAGCPNGIE 236 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206 RI G++ D PH+ + GC IG++ + R+ +++ R + Sbjct: 237 RIEGGLLSYGNDMTDDNT-PHECGLGRFCDTQTAIGC-IGRDALLRVAKEGPVQQIRAIA 294 Query: 207 ITGTD-DLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259 I G L + D +G + A+ + R+ D Sbjct: 295 IEGDRLPLCDRAWGLYAGDTRVGQVTSAAWSPDHHTNVAIGMVRMTHWDT---------- 344 Query: 260 HGVRVKASFPH 270 G R++ P Sbjct: 345 -GTRLRVETPD 354 >gi|163794496|ref|ZP_02188467.1| sarcosine oxidase, alpha subunit family protein [alpha proteobacterium BAL199] gi|159180220|gb|EDP64743.1| sarcosine oxidase, alpha subunit family protein [alpha proteobacterium BAL199] Length = 1003 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 69/325 (21%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A FL + T L R +L G ++ + +++ +D F Sbjct: 670 STLGKIDIRGGDAAEFLNRVYTNAWAKLGTGRCRYGFMLKEDGMVMDDGVTTRLADDHFH 729 Query: 67 LEIDRSKRDSLIDKLLFY----------KLRSNVI-----------------------IE 93 + +++ L Y +L S V I+ Sbjct: 730 MTTTTGGAARVMNWLEEYLQTEWPEMDVRLTS-VTEQWAVASICGPKCRELLGRLCSDID 788 Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141 + ++ + T + R S L W +D+ Sbjct: 789 LGNDAFPFMAMR-DGTVAEIPARVFRISFTGELSFEINVPTRYGLALWEALMTAGADLGI 847 Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 + H LR G + D ++ P D MD + +S +K +IG+ ++R Sbjct: 848 TPYGTEAMHVLRAEKGFIIVGQD-TDGSVTPLDLGMDWI--VSKSKPDFIGKRGLARPDL 904 Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVV------GKKALAIA 242 RK+ + + D + P G ++ +G + A+A+ Sbjct: 905 HKPDRKQLVGLLTEDPTFVLPEGGHVVETVKPKPPMAMLGHVTSSYYSPSAGRSIAMALV 964 Query: 243 RIDKVDHAIKKGMALTVHGVRVKAS 267 + + L + V + Sbjct: 965 KGGHARKGQTLYVPLEGRTIPVTVA 989 >gi|332717003|ref|YP_004444469.1| sarcosine oxidase, alpha subunit [Agrobacterium sp. H13-3] gi|325063688|gb|ADY67378.1| sarcosine oxidase, alpha subunit [Agrobacterium sp. H13-3] Length = 974 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 73/248 (29%), Gaps = 64/248 (25%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A FL + + +L + R +L G +++ ED +I+ Sbjct: 646 VDVQGADAAEFLDRLYCNAMKSLKVGMVRYGLMLREDGHAYDDGTCARLGEDHYIVTTTT 705 Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131 ++ + + F + + + + W Sbjct: 706 AQAGPVYRHMEFAR----------------------------QCLWPELDVQLISATDAW 737 Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191 + R+ IVD L + FP A +L Sbjct: 738 AQLAVAGPN-----ARRLIERIVDGFD--LSNAAFPFMACAELTVC-------------- 776 Query: 192 SRIQHRNIIRKRPMIITGTDDLPPS-------GSPILTDDIEIGT--LGVVVGKKALAIA 242 +R R I+ + +L G+ +++ +EIG G +AL + Sbjct: 777 ------GGLRARLFRISFSGELAYEIAVPARYGNALMSRLMEIGADLGATAYGTEALGVM 830 Query: 243 RIDKVDHA 250 RI+K A Sbjct: 831 RIEKGHAA 838 >gi|163735102|ref|ZP_02142538.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] gi|161391560|gb|EDQ15893.1| aminomethyl transferase family protein, putative [Roseobacter litoralis Och 149] Length = 349 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 72/311 (23%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + D+ + I+ G +L + K+ ED + + I Sbjct: 46 VELRGPDAARLMQMLTPRDLRGMLPGRCFYIPIVDETGGMLNDPVAVKLAEDRWWISIAD 105 Query: 72 SKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117 S L+ + Y+L +V+I+ ++ + + + + F D Sbjct: 106 S---DLLLWVKGISNGYRL--DVLIDEPDVSPLAIQGPKADELAARIFGDSIRDIKFFRF 160 Query: 118 ------------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------ 147 R + + IA + + L Sbjct: 161 GLFAFEGREMVVARSGYSKQGGFEVYVEGADIAMPL--WDALFKAGEDLNVRAGCPNGIE 218 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206 RI G++ D PH+ + GC IG++ + R+ +++ R + Sbjct: 219 RIEGGLLSYGNDMTDDNT-PHECGLGRFCDTQTAIGC-IGRDALLRVAKEGPVQQIRAIA 276 Query: 207 ITGTD-DLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259 + G L + D +G L A+ + R+ D Sbjct: 277 VEGDQLPLCDRAWGLYAGDTRVGQLTSAAWSPDHQTNVAIGMVRMTHWDT---------- 326 Query: 260 HGVRVKASFPH 270 G +++ P Sbjct: 327 -GTKLRVETPD 336 >gi|110679006|ref|YP_682013.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh 114] gi|109455122|gb|ABG31327.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh 114] Length = 1000 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R +L G I +I +I +D F Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRIRDDLFH 724 Query: 67 LEIDRSKRDSLID 79 + S+++ Sbjct: 725 VTTTTGGAASVLN 737 >gi|295667902|ref|XP_002794500.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb01] gi|226285916|gb|EEH41482.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb01] Length = 490 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52 L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L Sbjct: 234 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 292 Query: 53 LYFLISKIEEDTFILEIDRS 72 + ED F + I Sbjct: 293 IS-RTGYTGEDGFEISIPTD 311 >gi|17545822|ref|NP_519224.1| sarcosine oxidase subunit alpha [Ralstonia solanacearum GMI1000] gi|17428116|emb|CAD14805.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 1003 Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 85/272 (31%), Gaps = 56/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A+ L + T L R +L G + + ++ + F+ Sbjct: 666 STLGKIDIQGPDAVKLLNWVYTNPWGKLDVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725 Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94 + ++ L K+R V+ I+ Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785 Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142 +S+ T + + R S + L W + DI Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844 Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 Y H LR G + D +I P D M L ++ TK C +G+ ++R Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPSDLGMGGL--VAKTKDC-LGKRSLARSDTA 900 Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227 RK+ + + D + P G+ I+ D ++ Sbjct: 901 KAGRKQFVGLLTDDAQCVLPEGAQIIDKDTQV 932 >gi|149202120|ref|ZP_01879093.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. TM1035] gi|149144218|gb|EDM32249.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp. TM1035] Length = 976 Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I V G A FL + T TL R +L G ++ +++ E Sbjct: 641 CDVSTLGKIDVQGADAARFLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTCARMAET 700 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ + ++ L F Sbjct: 701 HFVMTTTTAAAGQVMRHLEF 720 >gi|163734075|ref|ZP_02141516.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149] gi|161392611|gb|EDQ16939.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149] Length = 1000 Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R +L G I +I +I +D F Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRIRDDLFH 724 Query: 67 LEIDRSKRDSLID 79 + S+++ Sbjct: 725 VTTTTGGAASVLN 737 >gi|77404199|ref|NP_001029165.1| aminomethyltransferase, mitochondrial precursor [Canis lupus familiaris] gi|11132475|sp|Q9TSZ7|GCST_CANFA RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine cleavage system T protein; Short=GCVT; Flags: Precursor gi|6562361|emb|CAB62567.1| glycine cleavage system T-protein [Canis lupus familiaris] Length = 403 Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 48/272 (17%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 K+ G + +++++ D+ L S G I +++ E + + Sbjct: 88 KILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAG 147 Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117 D + L+ K+R S+V +E+ + L + D Sbjct: 148 CWDKDLA-LMQGKVRELQNMGSDVSLEVVDNALLALQGPTATQVLQAGVADDLRKLPFMT 206 Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149 E F ++ + R + E + + LR+ Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSLRL 266 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208 G+ +D P + + G + G V+ Q + +++R + +T Sbjct: 267 EAGLCLYGSDI-DEHTTPVEGSLSWTLGKRRRAAMDFPGASVII-AQLKGKVQRRRVGLT 324 Query: 209 GTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239 + SPIL + IGT+ L Sbjct: 325 CEGAPVRAHSPILNMEGTVIGTVTSGCPSPCL 356 >gi|153810338|ref|ZP_01963006.1| hypothetical protein RUMOBE_00719 [Ruminococcus obeum ATCC 29174] gi|149833517|gb|EDM88598.1| hypothetical protein RUMOBE_00719 [Ruminococcus obeum ATCC 29174] gi|295108354|emb|CBL22307.1| Glycine cleavage system T protein (aminomethyltransferase) [Ruminococcus obeum A2-162] Length = 329 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 46/108 (42%), Gaps = 3/108 (2%) Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70 +++ GK A+ LQ I +++ + ++ +A L G+I+ ++ + + + + Sbjct: 29 IVEITGKDALEVLQKIYISNISKVAVGRSKYTASLDENGEIIDDVIVMHMADGLYW--VS 86 Query: 71 RSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID 117 L+ + +K +++ + I + + + ++ +D Sbjct: 87 DLYGPRLLPWIEKHKGTADIQTKIITYDWDMYAIQGPDSINAMNAMLD 134 >gi|293378111|ref|ZP_06624282.1| glycine cleavage T-protein (aminomethyl transferase) [Enterococcus faecium PC4.1] gi|292643268|gb|EFF61407.1| glycine cleavage T-protein (aminomethyl transferase) [Enterococcus faecium PC4.1] Length = 459 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 V G F L R + +G+I+ ++ KI +DTF Sbjct: 59 VSGPDVAEFFNRFFVNKFSKLKVGGIRHGILCNEKGQIMTDGVVMKINDDTF 110 >gi|220914205|ref|YP_002489514.1| FAD dependent oxidoreductase [Arthrobacter chlorophenolicus A6] gi|219861083|gb|ACL41425.1| FAD dependent oxidoreductase [Arthrobacter chlorophenolicus A6] Length = 835 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 34/272 (12%), Positives = 79/272 (29%), Gaps = 54/272 (19%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65 ++V G A L + T ++ +L G I ++++E++ F Sbjct: 517 LQVVGPGAEALLHRLSTGNITK-KPGAVTYCLLLEHDGGIRSDVTVARLEQEKFQLGVNS 575 Query: 66 -----ILEIDR---SKRDSLI-DK----------------LLFYKLRSNVIIEIQPINGV 100 L ++ S+ D L + + + +G+ Sbjct: 576 NVDFDYLRVEARKQSEADPAQWAHVTDITGSTCCIGLWGPLAREVI-GKLSSDDLSNDGL 634 Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143 +E + R S L + E +A Sbjct: 635 RYFRTKEISVGGIPVSAWRLSYVGELGWELYTTAEYGLKLWDLLFEAGQEFGIVAGGRGA 694 Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202 ++ +R+ G TD P+++ + I+ K ++G E ++ + + R Sbjct: 695 FNSMRLEKGYRLWGTDMTSEH-HPYESGLGFS--IAKDKTGFVGAESLAERKEQPATRVL 751 Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234 R + + + P+ +G + Sbjct: 752 RCLTVDYGTSVVLGKEPVYVGGEAVGYVTSAA 783 >gi|225679650|gb|EEH17934.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb03] Length = 491 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52 L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L Sbjct: 235 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 293 Query: 53 LYFLISKIEEDTFILEIDRS 72 + ED F + I Sbjct: 294 IS-RTGYTGEDGFEISIPTD 312 >gi|39936909|ref|NP_949185.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas palustris CGA009] gi|39650766|emb|CAE29289.1| glycine cleavage system protein T2 [Rhodopseudomonas palustris CGA009] Length = 382 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+A+I D++ LP R + G IL +++ + Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115 D L ++ + + L + L I ++ + + + F Sbjct: 119 -DRLFLVVNAACKTEDEAHLRAH-LSDACDITALTDRALIALQGPKAEAALAKF 170 >gi|220911316|ref|YP_002486625.1| glycine cleavage system aminomethyltransferase T [Arthrobacter chlorophenolicus A6] gi|219858194|gb|ACL38536.1| glycine cleavage system T protein [Arthrobacter chlorophenolicus A6] Length = 382 Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 30/167 (17%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59 LS+ + V G A FL D + + A+ S I G I+ + + Sbjct: 50 LSHMGEVWVTGPDAAAFL------DYALVGKLSAIAVGKAKYSLICDTDGGIIDDLITYR 103 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSNSSF 115 + D L + + V+ E + + +S Sbjct: 104 LPAG----------ADGTAKYL---VVPNAGNAKVVAEALQERAAGFDVTVQDASAETSL 150 Query: 116 IDERFSIADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFL 161 I + A+ +L + + +++K Y + + + D L Sbjct: 151 IAVQGPAAEAILLALVPAGQHSLVTELKYYAAVEVGITVNGAVQDLL 197 >gi|325964757|ref|YP_004242663.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3] gi|323470844|gb|ADX74529.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3] Length = 373 Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 102/329 (31%), Gaps = 69/329 (20%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + V G A FL + + + A+ S I G I+ + + ED + Sbjct: 50 LSHMGEVWVTGPDAGAFLDYALAGKLSAVAVGKAKYSLICQEDGGIIDDLISYRRSEDKY 109 Query: 66 ILE------------------------------------------------IDRSKRDSL 77 ++ + + L Sbjct: 110 LVVPNAGNAAVVAAALAERAANFDVRVQDASAETSLIAVQGPNAEAVLLTLVPAEQHP-L 168 Query: 78 IDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135 + +L +Y + V +EI ++ + E F ++ + + LL GH Sbjct: 169 VTELKYY---AAVEVEINGQELLLARTGYTGEDGFEIYIPNEDAAGLWEALLEAGSGHG- 224 Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194 I + + LR+ G+ + P A + + +SL K ++G+ ++ + Sbjct: 225 LIPAGLACRDSLRLEAGMPLYGNELSREG-NPFAAGLGPV--VSLKKESDFMGKAALAEL 281 Query: 195 QHRN---IIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGK------KALAIARI 244 + ++ + + G S P+L D +G + ALA + Sbjct: 282 KELGAGSTSGRKLVGLKGLGRRAGRSHYPVLKDGNVVGEVTSGQPSPTLGYPIALAYVDV 341 Query: 245 DKVDHAIKKGMALTVHGVRVKASFPHWYK 273 + + + L + +YK Sbjct: 342 EHSEPGTALDIDLRGKAEPFEVVALPFYK 370 >gi|296282995|ref|ZP_06860993.1| glycine cleavage system aminomethyltransferase T [Citromicrobium bathyomarinum JL354] Length = 376 Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 48/281 (17%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90 V +L R + +L G IL +++ + L ++ + + I L + L ++ Sbjct: 87 VSSLKPGRMRYTLLLAEDGGILDDLMVTNTGQ-HVALVVNGACKWDDIAFLREH-LPDDI 144 Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-------DVLLHRTW------------ 131 + ++ E + + + D W Sbjct: 145 TLTHHEDQALLALQGPEAVDALGELVPAAAELVFMTAGFYDWNGVPLWISRAGYTGEDGF 204 Query: 132 ------GHNEKIASDIK-----------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174 H EK+A+ + LR+ G+ D + + P A +L Sbjct: 205 EISVPADHAEKLAAALTEDKRVKPIGLGARDSLRLEAGLPLYGHDLT-AEVDPVTA--EL 261 Query: 175 LNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231 +S + G Y G +S +KR ++ GS I D ++GT+ Sbjct: 262 TFALSKKRREAGGYHGHARISGALSDGAAQKRVGLVLDGRLPAREGSEIFAGDAQVGTVT 321 Query: 232 VV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 +A+ +D I + + V R+ A Sbjct: 322 SGGFSPTLGHPIAMGYVDAAHAEIDTALEVQVRNKRLPARV 362 >gi|330951916|gb|EGH52176.1| aminomethyltransferase [Pseudomonas syringae Cit 7] Length = 968 Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114 F + S D + ++L + + + ++I + + + N E ++ Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759 Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160 E F V L G ++ + H LR+ +V+ F Sbjct: 760 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKVFDMR 819 Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200 + + A +D+ +S +K ++G+ V ++ + Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879 Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253 RK + LP G +L G + +A A D+ + Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939 Query: 254 GMALTVHGVRVKASF 268 + + GV V+A+ Sbjct: 940 PIRVE-DGVVVQATV 953 >gi|126726828|ref|ZP_01742667.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2150] gi|126703786|gb|EBA02880.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacterales bacterium HTCC2150] Length = 368 Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A +Q + D+ + ++ QG +L ++ K+ ED + + I Sbjct: 64 IAVRGPDAKSLMQVLTPRDLRRMVVGQCMYIPVVDEQGGMLNDPVLVKLAEDEYWISIAD 123 Query: 72 S 72 S Sbjct: 124 S 124 >gi|301061882|ref|ZP_07202612.1| aminomethyltransferase [delta proteobacterium NaphS2] gi|300443986|gb|EFK08021.1| aminomethyltransferase [delta proteobacterium NaphS2] Length = 415 Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 64/288 (22%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISKIEEDT 64 S+ + GK + FLQ ++T + L A+ + I T G + + + +D Sbjct: 53 SHMGRFIIRGKDGLAFLQHVLTNNAAALDIYRVGAQYTLIPTETGGAVDDAYLYRFRQDQ 112 Query: 65 FILEIDRSKR----------------DSLIDKLLFYKL---------------------- 86 F+L ++ + R L+D + Sbjct: 113 FLLVVNAANRKKDWQHFRQFMNDFHGLELLDHTAEMAMLSLQGPNSREILHNIISHGQLP 172 Query: 87 --RSNV--IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142 R N + I ++ ER + R + + Sbjct: 173 EPRRNAVSTVSISGTEVLLACTGYTGEPIGFELFMERAHGPG--IWRRLLNEGATPVGLG 230 Query: 143 TYHELRINHGIVDPNTDFLPST---IFPHDALMDLLNGISLT--KGCYIGQE-------- 189 LR+ G+ + T P + +S + KG ++G++ Sbjct: 231 ARDTLRLEAGLPLYGHELGVDTDGGEIPILSCPTAKPAVSFSPLKGDFVGKQALKNQFKD 290 Query: 190 ----VVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGV 232 + Q+ + + I + + GS +L + +G + Sbjct: 291 LERIINHDCQNLAHLPRIIRPIALIERGVARPGSMVLKEGNPVGVITS 338 >gi|167033108|ref|YP_001668339.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida GB-1] gi|166859596|gb|ABY98003.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas putida GB-1] Length = 967 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 43/114 (37%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + +S + V G A L+ + T LP R + + G ++ + +++ E Sbjct: 638 LIDVSTLGGLDVRGPDAAELLERLYTFGFAKLPVGRTRYALMTNEHGVVIDDGVCARLGE 697 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116 F + S D + ++L + + + ++I + + + N S Sbjct: 698 QHFYVTATTSGVDRIYQQMLKWNAQWRLDVDITNVTAALAAVNLAGPLSRQVLA 751 >gi|300024623|ref|YP_003757234.1| sarcosine oxidase subunit alpha family [Hyphomicrobium denitrificans ATCC 51888] gi|299526444|gb|ADJ24913.1| sarcosine oxidase, alpha subunit family [Hyphomicrobium denitrificans ATCC 51888] Length = 994 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S ++V G A FL + + TL AR A+L G ++ ++ ED Sbjct: 656 CDVSTLGKVEVHGADAGKFLDRVYINMMSTLQVGKARYGAMLREDGIMMDDGTAARFAED 715 Query: 64 TFILEIDRSKRDSLIDKLLF 83 + + ++ L Sbjct: 716 RYFVTTTTVNAIKVVQHLEL 735 >gi|253699039|ref|YP_003020228.1| glycine cleavage system protein T [Geobacter sp. M21] gi|251773889|gb|ACT16470.1| glycine cleavage system T protein [Geobacter sp. M21] Length = 363 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 22/49 (44%) Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79 V +P +R +L G ++ ++ ++ ED ++ ++ + + Sbjct: 76 VKGIPIGRSRYGFLLNQSGGVIDDLIVFRLAEDEVMIVVNAATAPNDFK 124 >gi|227548872|ref|ZP_03978921.1| aminomethyltransferase [Corynebacterium lipophiloflavum DSM 44291] gi|227079093|gb|EEI17056.1| aminomethyltransferase [Corynebacterium lipophiloflavum DSM 44291] Length = 359 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 107/310 (34%), Gaps = 66/310 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I V G A FL A+I++ + TL A+ S I+ G I+ + K+ ED Sbjct: 48 LSHMGEIDVIGPDAGAFLDYALISS-LSTLKVGKAKYSMIVAEDGGIVDDLISYKLAEDR 106 Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQE------HTFSNSSF 115 +++ + + D++ L F R+ +V + + +++ + S Sbjct: 107 YLVVPNAANTDAV--WLAFQS-RAGDFDVELTNRSEEIALIAVQGPRSLEVLEPLIDGSP 163 Query: 116 ID------------ERFSIADVLLHRTWGHNEK----------------------IASDI 141 D E D+++ RT E A + Sbjct: 164 GDLSYYSAGEMKLGEGADAIDIIVARTGYTGEDGFEIYSTFENAPAVWEAVISHGTACGL 223 Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 LR+ + + + I P +A M + + ++G++ + R Sbjct: 224 AARDSLRLEASMPLYGHELT-ADITPVEAGMGR--AFAKKEADFVGKQAL-------TGR 273 Query: 202 KRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253 + ++I G G+ + D +IG + L A+A +D I Sbjct: 274 EPSVVIAGLTSQDRRAAREGAEVFIGDDKIGVVTSGQPSPTLGYPVALAHLDPERAEIGT 333 Query: 254 GMALTVHGVR 263 + + + G R Sbjct: 334 DVEIDIRGRR 343 >gi|84514731|ref|ZP_01002095.1| sarcosine oxidase, alpha subunit [Loktanella vestfoldensis SKA53] gi|84511782|gb|EAQ08235.1| sarcosine oxidase, alpha subunit [Loktanella vestfoldensis SKA53] Length = 1000 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F+ + T L AR +L G I +I ++ D F Sbjct: 665 STLGKIEVSGPDATEFMNRMYTNPWTKLGVGRARYGLLLGEDGFIRDDGVIGRMRHDLFH 724 Query: 67 LEIDRSKRDSLID 79 + +++ Sbjct: 725 VTTTTGGAARVLN 737 >gi|260460563|ref|ZP_05808814.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] gi|259033668|gb|EEW34928.1| sarcosine oxidase, alpha subunit family [Mesorhizobium opportunistum WSM2075] Length = 997 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 85/301 (28%), Gaps = 71/301 (23%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A F++ + T L R +L G I ++ ++ D F Sbjct: 664 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFI-- 116 + +++ + Y I V+ + + + Sbjct: 724 VTTTTGGAPRVMNHMEDY---LQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEG 780 Query: 117 ----DERFSIADVL----------------------------------LHRTWGHNEKIA 138 DE V W +K Sbjct: 781 IDMSDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHG 840 Query: 139 SDI---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 + + H LR G + D T+ P DA +D + K ++G ++R Sbjct: 841 AAAYGTEAMHVLRAEKGYIIVGQD-TDGTVTPGDAGLDW--AVGKKKADFVGIRGLTRPD 897 Query: 196 HRNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAI 241 RK+ + + D + G+ I+ D + IG + + ALA+ Sbjct: 898 LVAKGRKQLVGLKTKDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSENCGRSIALAL 957 Query: 242 A 242 Sbjct: 958 V 958 >gi|163759509|ref|ZP_02166594.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43] gi|162283106|gb|EDQ33392.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43] Length = 851 Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 SN + +V G+ A FL ++T + + +L GK++ F I+K+ + F+ Sbjct: 490 SNFAKYEVSGEGAEAFLNHLMTNTMPK--TGRIVLTPMLNDNGKLIGDFTIAKLSDTRFM 547 Query: 67 L 67 + Sbjct: 548 V 548 >gi|1507668|dbj|BAA12709.1| ORF N313 [Schizosaccharomyces pombe] Length = 313 Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 33/71 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 V G++A +L++I + + L + SA G I+ +ISK + +T+ + + + Sbjct: 79 VRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDGNTYYIVTNAAC 138 Query: 74 RDSLIDKLLFY 84 + L + Sbjct: 139 SEKDEANLKKH 149 >gi|148256735|ref|YP_001241320.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium sp. BTAi1] gi|146408908|gb|ABQ37414.1| glycine cleavage system T-protein (aminomethyltransferase) [Bradyrhizobium sp. BTAi1] Length = 384 Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ D++ +P R + +G IL +++ E +L ++ + +D+ Sbjct: 76 ADAAAALERLVPQDIIGIPPGRQRYAQFTNAEGGILDDLMVANFGE-HLVLVVNAACKDA 134 Query: 77 LIDKLL 82 I L Sbjct: 135 DIQLLR 140 >gi|91774809|ref|YP_544565.1| aminomethyltransferase [Methylobacillus flagellatus KT] gi|91708796|gb|ABE48724.1| aminomethyltransferase [Methylobacillus flagellatus KT] Length = 961 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 85/275 (30%), Gaps = 51/275 (18%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+V G A FL+ T +R + +L G ++ L ++ ++ F Sbjct: 642 SSFGKIEVRGPEAGLFLERFFTGRYADQAIGESRYTMLLDESGVVVDDGLAHRLGDELFY 701 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------- 113 L S ++ ++ ++ + I + + G + N + Sbjct: 702 LTSGTSNAAAVYREMQRWQQIWQLDIGLVNVTGAYAAINVAGPLARQVLSGLVNFNLAEQ 761 Query: 114 ---SFIDERFSIADVLLHR-------TWGHNEKIASDIKTYHE----------------- 146 S D + L R T+ + + + Sbjct: 762 QPHSARDTEIAGVPTRLLRVAFVSDSTYELHVPTPQAAFVWEQVMRAGSSLGLKPFGTDA 821 Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203 LR+ G P D P + + I++ K +IG+ + I R ++K Sbjct: 822 QRILRLEMGHPMPGID-TDGLTNPLEIGAQ--HAIAMDKPDFIGKRSLQIIAKR-PLKKA 877 Query: 204 PMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV 234 + +LP + ++ + G + + Sbjct: 878 LVAFALKPGFAGELPFECNLVIRNGEIEGRVTSIA 912 >gi|321477545|gb|EFX88503.1| hypothetical protein DAPPUDRAFT_310693 [Daphnia pulex] Length = 110 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 4/71 (5%) Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 F+D R + + I + Y RI GI + + + Sbjct: 40 FVDPRLQALGLRVLTVSQTPFPIQNIPRGTEDDYQFFRIQLGISEAPGNLISGKSIILQH 99 Query: 171 LMDLLNGISLT 181 L S Sbjct: 100 GFQDLKAFSWN 110 >gi|186470708|ref|YP_001862026.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] gi|184197017|gb|ACC74980.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia phymatum STM815] Length = 988 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 31/72 (43%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I+V G A FL+ + + L + R + + G ++ +I+++ +D F Sbjct: 649 IEVRGPQAAEFLERVYVSKYAGLKAGMTRYAVMCDESGVVIDDGVIARLADDHFYFTTTT 708 Query: 72 SKRDSLIDKLLF 83 S ++ +L Sbjct: 709 SGAAAIYRELSR 720 >gi|255264758|ref|ZP_05344100.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62] gi|255107093|gb|EET49767.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62] Length = 975 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 96/332 (28%), Gaps = 75/332 (22%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G+ A L T + TL R +L G +L +++ + Sbjct: 641 CDVSTLGKIDIQGQDAAALLDLAYTNMMSTLKVARVRYGLMLREDGHVLDDGTCARLGDQ 700 Query: 64 TFILEIDRSKRDSLIDKLLFYK--LR--SNVIIEIQPINGVVLSWNQEHT------FSNS 113 +++ + ++ L F + LR V + + + F +S Sbjct: 701 HYVITTTTTAAGLVMRHLEFIRQALRPDWRVSLASATEQWAQFAVAGPKSRELLSRFLDS 760 Query: 114 SFIDERFSIADV-------------------------------------LLHRTWGHNEK 136 + DE + LL T Sbjct: 761 TIDDENWPFMACGNVEVAGVSGRLFRISFSGEHAYEIAVPARYGDSLFRLLTATAETMGG 820 Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196 ++ + LRI G + + + D MD + +S+ K C IG+ + +R+ Sbjct: 821 GPYGMEALNVLRIEKGFITHAE--IHGRVTAFDIGMDRM--VSVKKDC-IGKTMAARV-- 873 Query: 197 RNIIRKR-----PMIITGTDDLPPSGSPILTDDI------EIGTLGVV------VGKKAL 239 ++ R I +L +G+ + G + V L Sbjct: 874 -GLVEDRDELIGLRPIAFDGEL-TAGAHLFERGADATRQNSAGYVTSVCYSPTLCQNLGL 931 Query: 240 AIAR--IDKVDHAIKKGMALTVHGVRVKASFP 269 R D++ I+ L + P Sbjct: 932 GFLRDGRDRMGETIRLVDHLRSVETLCEVVNP 963 >gi|326936022|ref|XP_003214058.1| PREDICTED: aminomethyltransferase, mitochondrial-like, partial [Meleagris gallopavo] Length = 205 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 9/113 (7%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 +V G+ + FL++++ D+ L + + G I+ +++ ED + + Sbjct: 1 RVYGRDRVRFLESLVVGDIAELLPGQGTLTLLTNECGGIVDDLIVTNTVEDHLYVVSNAG 60 Query: 73 KRDSLIDKLLFY----KLR---SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118 D D+ + +LR S+V +E+ + L + D+ Sbjct: 61 CAD--KDRAVMEGRAAELRAAGSDVHLEVSDNALLALQGPSMAQVLQAGLPDD 111 >gi|13474476|ref|NP_106044.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] gi|14025229|dbj|BAB51830.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099] Length = 869 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 80/279 (28%), Gaps = 56/279 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69 ++ G A L I DV P + +L +G I ++++ E+ F + Sbjct: 548 ELGGPDAAKALDWICANDVSK-PVGRLTYTQLLNTRGGIEADLTVARLAEEKFYIVTGTG 606 Query: 70 -----------------DRSKRD--SLIDKLLFY--KLRSNVIIEIQPINGVVLSWN--- 105 D D L K R +V+ + + S+ Sbjct: 607 FRTHDASWICDHIGEGHDAELTDVTEDFGTLSLMGPKAR-DVLAAVTDADVSNASFPFGH 665 Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147 +E + + R + L + L Sbjct: 666 VREIAIAGHTVRALRVTYVGELGWELHVPIAATGEVFDALMAAGKTHGIRPVGYRALESL 725 Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206 R+ G +D P+ P +A + + L K ++G+ + ++ ++KR Sbjct: 726 RLEKGYRAWGSDITPNDT-PQEAGLGW--AVKLRKNTDFVGRRALEKV-VGAPLKKRFAG 781 Query: 207 ITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243 + + IL + +G L G + + Sbjct: 782 FAVDNPEIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 818 >gi|195132885|ref|XP_002010870.1| GI21784 [Drosophila mojavensis] gi|193907658|gb|EDW06525.1| GI21784 [Drosophila mojavensis] Length = 935 Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 576 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 634 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 635 RSMSWIRKHMPEHLRAKVNVAD 656 >gi|86359191|ref|YP_471083.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42] gi|86283293|gb|ABC92356.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42] Length = 997 Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|120611805|ref|YP_971483.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1] gi|120590269|gb|ABM33709.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1] Length = 376 Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A + +I DV+ L R +L +G I+ + +D F+ Sbjct: 57 SHMGQLRLVGPDAAAAFETLIPVDVIGLGIGKQRYGLLLNDEGGIIDDLMFVNRGDDLFV 116 Query: 67 L 67 + Sbjct: 117 I 117 >gi|218660010|ref|ZP_03515940.1| sarcosine oxidase alpha subunit protein [Rhizobium etli IE4771] Length = 274 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ ED F Sbjct: 130 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 189 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 190 VTTTTGGAPRVLHHMEDY 207 >gi|13472226|ref|NP_103793.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099] gi|14022971|dbj|BAB49579.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099] Length = 812 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 94/283 (33%), Gaps = 59/283 (20%) Query: 13 KVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILE-ID 70 +V G +A +L I+ LP A + LT G + ++++ + ED+F L Sbjct: 497 EVSGPNAAAWLDRILAN---RLPAVGKATLAHHLTAGGGVQAEYMVAGLGEDSFYLVSTP 553 Query: 71 RSKR---DSLIDKL----------------LFYKLRSNVIIEIQPINGVVLS-----WNQ 106 R++R D L L F + +QP+ + LS W Sbjct: 554 RAERWNFDDLSKLLPADGSVSLKNVTNERGCFTIVGPKARDVLQPLTEIDLSNAGFPWFG 613 Query: 107 EHTFSNSSFIDERF-----------------SIADVLLHRTWGHNEKIA---SDIKTYHE 146 T S + D R + LL G EK + Sbjct: 614 VKTGSVALASDVRLLRVNYEGELGWELYHPMAYQRQLLDAILGEGEKHGMRLVGLHALES 673 Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 LR+ D P + ++ ++ I L KG ++G++ V + + RN R+ + Sbjct: 674 LRLEKSYRAMYRDMNPE-LNALESGLERF--IRLDKGDFVGRDAVLKYKARNDQRRSVTL 730 Query: 207 ITGTDDLPPSGSP-ILTDDIEIGTLGVV------VGKKALAIA 242 TD S + +G + ALA+ Sbjct: 731 RIETDGASTLASEGLYIGGELVGRITSGGYGYTLGHDVALALL 773 >gi|288961696|ref|YP_003452006.1| sarcosine oxidase, subunit alpha [Azospirillum sp. B510] gi|288913976|dbj|BAI75462.1| sarcosine oxidase, subunit alpha [Azospirillum sp. B510] Length = 1000 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 90/320 (28%), Gaps = 64/320 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A F+ + T L R +L G I +I ++ D F Sbjct: 667 STLGKIEIVGPDAAEFMNRMYTNAWTKLAPGRCRYGLLLGEDGFIRDDGVIGRLAHDRFH 726 Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106 + ++ + Y V + V++ Sbjct: 727 VTTTTGGAARVLGMMEDYLQTEWPDLKVWLTSTTEQWSVIALQGPNARKLIEPFVEGIDL 786 Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNEK---------------------------IA 138 E F + + R L R E Sbjct: 787 SEGAFPHMAVATGRICGVPTRLFRVSFTGELGFEINVPARYGRAVWEKLFEAGQRFGITP 846 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P DA + I TK ++G+ +SR Sbjct: 847 YGTETMHVLRAEKGYIIVGQD-TDGTLTPDDAGLSW--AIGKTKPDFVGKRSLSRPDMLA 903 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKKALAIARIDKVDHA 250 RK+ + + +D + G+ I+ D + +G + A Sbjct: 904 TNRKQLVGLLTSDPKTVLEEGAQIILDPNQPVPMEMVGHVTSSYWS---AELGRSIALAV 960 Query: 251 IKKGMALTVHGVRVKASFPH 270 I+ G A+ G V P Sbjct: 961 IQGGRAM--EGRTVHVPMPD 978 >gi|255261321|ref|ZP_05340663.1| FAD dependent oxidoreductase/aminomethyl transferase [Thalassiobium sp. R2A62] gi|255103656|gb|EET46330.1| FAD dependent oxidoreductase/aminomethyl transferase [Thalassiobium sp. R2A62] Length = 811 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 98/318 (30%), Gaps = 72/318 (22%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQG-------------------K 50 I++ G A FL +I LP K R + +L Q + Sbjct: 490 IEITGDDAQNFLDRMIC---GRLPRKAGRVGLTYLLNHQAMVKAEATIANIPASNRGPDR 546 Query: 51 ILL----------------------YFLISKIEEDTFILEIDRSKRDSLIDKLLFYK--- 85 I + + D IL + K ++ + Sbjct: 547 IWYGSAAASEQHDMDWLASHIQDVEDVQLKSLTNDQTILVLAGPKARDVLSRASRGDWSA 606 Query: 86 -------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138 +R + I P + +S++ E + ++ L H+ ++ Sbjct: 607 AGFPWLTVR-ECFVGIAPATVMAVSFSGELAYEIHVPNASLYAAYLALREAGAAHDLRLF 665 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + +R+ G + +D L P + + I + K ++G++ + + Q Sbjct: 666 GALAI-DSMRMEKGYLHWKSDILTE-FDPFETGLSRF--IKIDKPDFVGRQALIQRQSEG 721 Query: 199 IIRKRPMIITGTD--DLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHA 250 RK + ++ G+ ++ D +GT+ G +A A +D Sbjct: 722 -PRKLLVNLSLDSRHAAAHPGASVMLDGAVVGTVTS--GDWGRRTGLNIAYAFVDPPLAD 778 Query: 251 IKKGMALTVHGVRVKASF 268 + + + V G + A Sbjct: 779 LGTTLEIDVLGTMIAAQV 796 >gi|50085627|ref|YP_047137.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Acinetobacter sp. ADP1] gi|49531603|emb|CAG69315.1| sarcosine oxidase (alpha subunit) oxidoreductase protein [Acinetobacter sp. ADP1] Length = 973 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 45/110 (40%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S +++ G + F+ + T LP R + + G ++ + +++ E Sbjct: 645 IDVSTLGGLEIRGPDSAEFINRLYTFGFTKLPVGKTRYAVMSNEHGVVIDDGVAARLSEH 704 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113 F + S D + ++L + + + ++I + + + N S + Sbjct: 705 HFYVTATTSGVDRIYQQMLKWNAQWRLNLDITNVTTALAAVNIAGPQSRA 754 >gi|327194870|gb|EGE61702.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CNPAF512] Length = 997 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|304394587|ref|ZP_07376506.1| aminomethyl transferase family protein [Ahrensia sp. R2A130] gi|303293248|gb|EFL87629.1| aminomethyl transferase family protein [Ahrensia sp. R2A130] Length = 367 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 23/55 (41%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 +++ G A Q + D+ + A+ G I+ ++ K++ED F Sbjct: 64 VQLKGPDAAELAQILSPRDLTKCKVGQGKYVAMCNHDGAIVNDPILLKLDEDLFW 118 >gi|190893443|ref|YP_001979985.1| sarcosine oxidase subunit alpha [Rhizobium etli CIAT 652] gi|190698722|gb|ACE92807.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652] Length = 997 Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|330958766|gb|EGH59026.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. maculicola str. ES4326] Length = 968 Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748 >gi|242003124|ref|XP_002422618.1| aminomethyltransferase,putative [Pediculus humanus corporis] gi|212505419|gb|EEB09880.1| aminomethyltransferase,putative [Pediculus humanus corporis] Length = 404 Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTFILEIDR 71 K+ GK I ++ I TADV LP + G IL +++K + + + Sbjct: 83 KIHGKDRIELIERITTADVGGLPENKGSLTVFTDKVTGGILDDLIVTKTGDGYLYVVSNA 142 Query: 72 SKRD 75 +RD Sbjct: 143 GRRD 146 >gi|298487431|ref|ZP_07005477.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158050|gb|EFH99124.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 968 Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ + Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759 Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 + I R + + + + + Sbjct: 760 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALTLWDALTEAGKAFDMR 819 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G V + D P + M +S +K ++G+ V ++ + Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPAEIDMGW--AVSRSKPFFVGRRSVDILEAQ 876 Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250 RK ++ LP G +L G + +A A D+ Sbjct: 877 PQKRKLVGFTLSKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPG 936 Query: 251 IKKGMALTVHGVRVKASF 268 + + + GV V+A+ Sbjct: 937 QQIPIRVE-DGVVVQATV 953 >gi|269954855|ref|YP_003324644.1| glycine cleavage system T protein [Xylanimonas cellulosilytica DSM 15894] gi|269303536|gb|ACZ29086.1| glycine cleavage system T protein [Xylanimonas cellulosilytica DSM 15894] Length = 379 Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 49/144 (34%), Gaps = 2/144 (1%) Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 LS+ I + G+ A L A++ ++ AR S + G +L ++ ++ E Sbjct: 51 LSHMGEIHLEGRQAAAALDHALVGN-ATSIAVGRARYSMLCAEDGSVLDDLIVYRLGEVH 109 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 F++ + + + +L+ +V + + +++ + + + Sbjct: 110 FLVVANAGNAELVSRELVARAADFDVAVTDRSATTALIAVQGPRAEQIVAELTAPDDVET 169 Query: 125 VLLHRTWGHNEKIASDIKTYHELR 148 + + S R Sbjct: 170 LRGLPYYAAAPVTLSTGARALAAR 193 >gi|119476054|ref|ZP_01616406.1| hypothetical protein GP2143_05675 [marine gamma proteobacterium HTCC2143] gi|119450681|gb|EAW31915.1| hypothetical protein GP2143_05675 [marine gamma proteobacterium HTCC2143] Length = 837 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A +L +++ ++ +L+ G + F I K +D + L Sbjct: 520 SVKGAGAGEWLNSLVANNIPK-GNGRVGLCHMLSKNGGVRAEFTIYKKGKDDYYL 573 >gi|145550293|ref|XP_001460825.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428656|emb|CAK93428.1| unnamed protein product [Paramecium tetraurelia] Length = 375 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +KV G+ + F++ + T + T + IL + I+ +++K +D Sbjct: 60 SHMGQVKVFGEDRVKFVETLTTGEFQTKKSGQSVLCLILNEKAGIIDDTIVAKR-DDHIH 118 Query: 67 LEIDRSKRDSLIDKLLF 83 + ++ + + ++ Sbjct: 119 IVVNAGNKFIDMKQMDK 135 >gi|257068416|ref|YP_003154671.1| glycine cleavage system aminomethyltransferase T [Brachybacterium faecium DSM 4810] gi|256559234|gb|ACU85081.1| aminomethyltransferase [Brachybacterium faecium DSM 4810] Length = 377 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ + + G A L + + + A+ S +LT G ++ + ++ ED F Sbjct: 53 LSHMGEVHLRGPQAAEALDHALAGKMSAMAVGRAKYSLLLTEDGGVIDDVITYRLAEDHF 112 Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHT 109 ++ + S + +L + R+ +V ++ +++ + Sbjct: 113 LVIPNASNAEVDAAEL---RTRAAGFDVEVDDASDRTSLIAVQGPAS 156 >gi|119383267|ref|YP_914323.1| sarcosine oxidase alpha subunit family protein [Paracoccus denitrificans PD1222] gi|119373034|gb|ABL68627.1| sarcosine oxidase, alpha subunit family [Paracoccus denitrificans PD1222] Length = 977 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 71/254 (27%), Gaps = 51/254 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I V G A +L + T + +LP R I + G ++ + +++ EDT++ Sbjct: 643 STLGKIIVKGPDAGRYLDMMYTGMMSSLPIGKCRYGLICSENGFLIDDGVAARLSEDTWL 702 Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNV----------------IIEI 94 + + + + + V I++ Sbjct: 703 VHTTTGGAERMHGHFEDWLQCEWWDWKVWTANVTEQWAQVAVVGPKARVLLERLGGKIDL 762 Query: 95 QPINGVVLSWNQEHTFS----------------NSSFIDERFSIADVLLHRTWGHNEKIA 138 P + W + + R LH Sbjct: 763 SPEALPFMGWIEGEIAGIPARVYRISFSGELSFEVAVPANRGLELWEKLHEAGRDLNVTP 822 Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 + H +R G + + T+ P D M IS K YIG+ R + Sbjct: 823 YGTEAMHVMRAEKGFIMIGDE-TDGTVIPQDLGMSW--AISKKKADYIGKRAQERSFMTD 879 Query: 199 IIRKRPMIITGTDD 212 R + + + D Sbjct: 880 PGRWKLVGLESLDG 893 >gi|163793022|ref|ZP_02186998.1| sarcosine oxidase alpha subunit [alpha proteobacterium BAL199] gi|159181668|gb|EDP66180.1| sarcosine oxidase alpha subunit [alpha proteobacterium BAL199] Length = 1013 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 2/121 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I V G + FL + + LP AR +L G + S++ + F+ Sbjct: 677 SSLGKIDVQGPDSAEFLNRVYSNGFAALPVGKARYGLMLREDGLVDDDGTTSRLSDTHFL 736 Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124 + ++ L +Y + + + + + + AD Sbjct: 737 MTTTTVHAAKVLADLEWYLQVVWPELDVRVSSVTEQWAGMALPGPKAREVLAAAVDPGAD 796 Query: 125 V 125 V Sbjct: 797 V 797 >gi|56696623|ref|YP_166984.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi DSS-3] gi|56678360|gb|AAV95026.1| sarcosine oxidase, alpha subunit family [Ruegeria pomeroyi DSS-3] Length = 977 Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A L + T TL R +L G ++ +++ ED Sbjct: 642 ADVSTLGKIDIQGTDAARLLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTTARLGED 701 Query: 64 TFILEIDRSKRDSLIDKLLF 83 +++ + ++ L F Sbjct: 702 HYLMTTTTAAAGQVMAHLEF 721 >gi|218662038|ref|ZP_03517968.1| sarcosine oxidase, alpha subunit family protein [Rhizobium etli IE4771] Length = 528 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 +S I++ GK A FL + L AR +L G I S+ + Sbjct: 212 LCDVSTLGKIEIFGKDAGTFLDRVYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 271 Query: 63 DTFILEIDRSKRDSLIDKLLF 83 + F + + ++ L F Sbjct: 272 EHFFMTTTTALAAGVLTHLEF 292 >gi|311897618|dbj|BAJ30026.1| hypothetical protein KSE_42410 [Kitasatospora setae KM-6054] Length = 342 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 11 FIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 +++ G FL D+ + R + L G L +I +D+ Sbjct: 29 LVRISGGDRYEFL------DLFLAKSSEYVEPDSVREALALNADGTPFAILLHFEIGDDS 82 Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114 ++L + L L ++ +E+ P ++ +S ++ Sbjct: 83 WLLPRTPVTAEELTAYLAAVDAPADATVEVAPEGWGASAFEGPQAWSAAA 132 >gi|213025585|ref|ZP_03340032.1| glycine cleavage system aminomethyltransferase T [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 98 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLY 54 S+ + + + G FL+ ++ DV L A S +L G ++ Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDD 98 >gi|84999130|ref|XP_954286.1| glycine cleavage complex t-protein [Theileria annulata] gi|65305284|emb|CAI73609.1| glycine cleavage complex t-protein, putative [Theileria annulata] Length = 672 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 +TY R+ GI+ P+ D P + H +LM L+ + K G + + R + + Sbjct: 377 ETYDIARLESGIIRPDLDLTPESTPMHCSLMWNLDINKIRKRIVFGHKHLGRAMVDGVSK 436 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 R +I+ P + + IG + AL + Sbjct: 437 VRVGLISNKMITPSCTILTSSTRMPIGKITSSAFSPALGM 476 >gi|209550932|ref|YP_002282849.1| sarcosine oxidase subunit alpha family [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536688|gb|ACI56623.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 997 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ +D F Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|71736006|ref|YP_275145.1| sarcosine oxidase subunit alpha family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556559|gb|AAZ35770.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323636|gb|EFW79720.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328275|gb|EFW84279.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 968 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ + Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNMAGPDSR 748 >gi|15890670|ref|NP_356342.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] gi|15158935|gb|AAK89127.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 996 Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R +L G I +I ++ ED F Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWTKLAPGRCRYGLLLGDDGFIRDDGVIGRMTEDRFH 723 Query: 67 LEIDRSKRDSLID 79 + +++ Sbjct: 724 VTTTTGGAARVLN 736 >gi|330876858|gb|EGH11007.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 968 Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + + G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759 Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 + I R + + + ++ + Sbjct: 760 LSAEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALSEAGKAFDMR 819 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G V + D P + M +S TK ++G+ V ++ Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRSVDILEAL 876 Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250 RK + LP G +L G + + +A A D+ Sbjct: 877 PQKRKLVGFTLPNASPLPLEGHLVLKGADISGNVTSCEYSQNLGMIIGMAYAAFDQSTPG 936 Query: 251 IKKGMALTVHGVRVKASF 268 + + + GV V+A+ Sbjct: 937 QQIPIRVE-DGVVVQATV 953 >gi|332716790|ref|YP_004444256.1| probable sarcosine oxidase oxidoreductase protein, alpha subunit [Agrobacterium sp. H13-3] gi|325063475|gb|ADY67165.1| probable sarcosine oxidase oxidoreductase protein, alpha subunit [Agrobacterium sp. H13-3] Length = 986 Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL R + G + ++ ++ ED F Sbjct: 653 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLSEDRFH 712 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 713 VTTTTGGAPRVLQHMEDY 730 >gi|221213731|ref|ZP_03586705.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1] gi|221166520|gb|EED98992.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1] Length = 998 Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 25/77 (32%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G + + ++ E ++ Sbjct: 665 STLGKIDIQGPDAATLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYL 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + +++ + Sbjct: 725 MTTTTGGAARVLNWMER 741 >gi|146304426|ref|YP_001191742.1| glycine cleavage system aminomethyltransferase T [Metallosphaera sedula DSM 5348] gi|145702676|gb|ABP95818.1| aminomethyltransferase [Metallosphaera sedula DSM 5348] Length = 347 Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 58/307 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQ---AIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIE 61 LS+ +++ GK LQ ++ V G +A L + + + K+ Sbjct: 48 LSHMGRLRITGK-----LQEFENLVAKKVSDSSPGTMVGPTAFLNDKAGFVDDVMTYKVS 102 Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111 E F++ + R+ +I+ + S++ +E + V+++ + Sbjct: 103 ESEFLVVTNAINREKVINWIRK---NSSLEVEDLTFDLVMIALQGRGIWEVAEKPDLSPL 159 Query: 112 ----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELR 148 + F+ R W E S ++ LR Sbjct: 160 QFKLNAKFEGHEVFLLSRSGWTGEDGLEFWAKPEVAQSILERLIARGVKGAGLVARDSLR 219 Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208 G V D + P +A + SL K +IG+ + I + R R I Sbjct: 220 QEMGFVLYGEDIG-EDVNPVEARYWV---YSLDKD-FIGKGALLDILRTGVDRLRIGIKL 274 Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260 + +P + S I E+G + + + + Sbjct: 275 PKNQRVIPRNSSKIKIAGKEVGYVTSSTFSPYLSRVIGMGYLSSRHFLMGGNAEVEVRGK 334 Query: 261 GVRVKAS 267 VK S Sbjct: 335 DYSVKLS 341 >gi|146308473|ref|YP_001188938.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas mendocina ymp] gi|145576674|gb|ABP86206.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas mendocina ymp] Length = 376 Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 21/52 (40%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 G A L T D+ L + + +L GK + ++ + + F++ Sbjct: 63 GPHAESLLDYATTRDIGKLYPGKSVYACLLDEDGKFIDDCIVYRTGPNAFMV 114 >gi|294083811|ref|YP_003550568.1| sarcosine oxidase subunit alpha family protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663383|gb|ADE38484.1| sarcosine oxidase, alpha subunit family [Candidatus Puniceispirillum marinum IMCC1322] Length = 990 Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 63/256 (24%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +++ I + G+ A F+ + LP R +L G ++ +++ E Sbjct: 652 CDVTSLGKIDIQGRDATTFINRVYANGFAKLPIGKTRYGLMLREDGIVMDDGTTARLAES 711 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123 +++ + + L F + D + Sbjct: 712 HYVMTTTTANAVGVFRHLEF--------------------------CRQCLWPD--LDVQ 743 Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 + +W + ++ I+DP D + FP A Sbjct: 744 LISTTESWAQYAIAGPN-----ARKLLEKIIDPEFDL-SNDAFPFMAC------------ 785 Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-------GSPILTDDIEIGTLGVVV-- 234 G+ V +R R I+ + +L G ++ +E G +V Sbjct: 786 ---GKVTVC-----GGLRARLFRISFSGELAYELAVPTRYGDALIRRIMEAGEAYDIVPY 837 Query: 235 GKKALAIARIDKVDHA 250 G +AL + RI+K A Sbjct: 838 GTEALGVMRIEKGHAA 853 >gi|312796400|ref|YP_004029322.1| aminomethyltransferase family protein [Burkholderia rhizoxinica HKI 454] gi|312168175|emb|CBW75178.1| Aminomethyltransferase family protein [Burkholderia rhizoxinica HKI 454] Length = 93 Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245 +V+R Q+R I++R + +G + + G+VV A +D Sbjct: 1 MVARSQYRGTIKRRT--VLAHTAQAHAGVEVFHSEDPNQPCGMVVNAAAAPEGGVD 54 >gi|254469679|ref|ZP_05083084.1| sarcosine oxidase, alpha subunit family [Pseudovibrio sp. JE062] gi|211961514|gb|EEA96709.1| sarcosine oxidase, alpha subunit family [Pseudovibrio sp. JE062] Length = 1000 Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 23/59 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S I+V G A F+ + T L R +L G I +I +I +D F Sbjct: 667 STLGKIEVVGPDAAEFMNRMYTNPWTKLAPGRCRYGLLLGEDGFIRDDGVIGRISQDRF 725 >gi|298712644|emb|CBJ48669.1| Aminomethyltransferase [Ectocarpus siliculosus] Length = 419 Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ I+ GK A F++ + D+ L R + I G I+ +++ D Sbjct: 94 SHMGQIRWTGKDAADFIERCVVGDIKGLKAGEGRLTLITNANGGIVDDTVVTNAG-DYIY 152 Query: 67 LEIDRSKRDSLIDKLL 82 + ++ + + + Sbjct: 153 MVVNGACKHGDMAHFK 168 >gi|294827627|ref|NP_710543.3| glycine cleavage system aminomethyltransferase T [Leptospira interrogans serovar Lai str. 56601] gi|293385471|gb|AAN47561.2| glycine cleavage T protein [Leptospira interrogans serovar Lai str. 56601] Length = 396 Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FL++I V +L + +AIL G ++ I K + +++ + S +++ + L Sbjct: 94 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 153 >gi|28869645|ref|NP_792264.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. tomato str. DC3000] gi|28852887|gb|AAO55959.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 968 Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + + G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759 Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146 + I R + + + +K + Sbjct: 760 LSTEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVAARHALKLWDALSEAGKAFDMR 819 Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197 LR+ G V + D P + M +S TK ++G+ V ++ Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRAVDILEAL 876 Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250 RK + LP G +L G + + +A A D+ Sbjct: 877 PQKRKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCEYSQTLDMIIGMAYAAFDQSTPG 936 Query: 251 IKKGMALTVHGVRVKASF 268 + + + GV V+A+ Sbjct: 937 QQIPIRVE-DGVVVQATV 953 >gi|45599449|gb|AAS68938.1| glycine cleavage T protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 375 Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FL++I V +L + +AIL G ++ I K + +++ + S +++ + L Sbjct: 73 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 132 >gi|229259641|ref|YP_000301.2| glycine cleavage system aminomethyltransferase T [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|31340143|sp|Q8F935|GCST_LEPIN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|59797810|sp|Q72VI6|GCST_LEPIC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein Length = 371 Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%) Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81 FL++I V +L + +AIL G ++ I K + +++ + S +++ + L Sbjct: 69 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 128 >gi|289650519|ref|ZP_06481862.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 501 Score = 37.1 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ + Sbjct: 173 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 232 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 233 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 281 >gi|119184181|ref|XP_001243020.1| hypothetical protein CIMG_06916 [Coccidioides immitis RS] Length = 1023 Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52 L N++ + + G S+ LQ+++T D+ TL + R L P G ++L Sbjct: 695 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 753 Query: 53 LYFLISKIEEDTFILEIDRSK 73 + ED F + I Sbjct: 754 IS-RTGYTGEDGFEISIPTDH 773 >gi|15890903|ref|NP_356575.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] gi|15159208|gb|AAK89360.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 986 Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 86/267 (32%), Gaps = 53/267 (19%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL R + G + ++ ++ ED F Sbjct: 653 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFH 712 Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQP--INGVVLSWNQ---- 106 + ++ + Y L S +I +Q V+ + + Sbjct: 713 VTTTTGGAPRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDL 772 Query: 107 -EHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASD-------------------- 140 F + + + +F L R G + +D Sbjct: 773 SPEAFPHMAVAEGKFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRDRTEAVGGCL 832 Query: 141 --IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D T+ P DA + +S K ++G + RI Sbjct: 833 YGTETMHILRAEKGYIIVGQD-TDGTVTPDDAGLAW--AVSKKKTDFVGIRGLKRIDLTR 889 Query: 199 IIRKRPMIITGTDDL--PPSGSPILTD 223 RK+ + + D L P G I+TD Sbjct: 890 TGRKQLVGLKTKDRLTVPDEGGQIVTD 916 >gi|289624007|ref|ZP_06456961.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868174|gb|EGH02883.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 968 Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + V G A L + T L P +R + + QG ++ + ++ + Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748 >gi|116672260|ref|YP_833193.1| FAD dependent oxidoreductase [Arthrobacter sp. FB24] gi|116612369|gb|ABK05093.1| dimethylglycine oxidase [Arthrobacter sp. FB24] Length = 835 Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 + V G A L + T ++ +L G I ++++ E+ F L ++ Sbjct: 517 LAVVGPGAQALLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEQFQLGVNS 575 Query: 72 SK 73 + Sbjct: 576 NV 577 >gi|159044658|ref|YP_001533452.1| sarcosine oxidase subunit alpha [Dinoroseobacter shibae DFL 12] gi|157912418|gb|ABV93851.1| sarcosine oxidase subunit alpha [Dinoroseobacter shibae DFL 12] Length = 1000 Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 86/290 (29%), Gaps = 59/290 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R +L G I +I ++ +D F Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRMRDDLFH 724 Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106 + +++ + Y V + ++ N Sbjct: 725 VTTTTGGAARVLNMMEDYLQTEWPELKVWLTSTTEEWATIALNGPNARKLLAPFVEGADI 784 Query: 107 -EHTFSNSSFIDE----------RFSIADVLLHRTWGHN-------EKIASDIKTY---- 144 F + S ++ R S L EK+ + Y Sbjct: 785 SADAFPHMSVVECTVAGFPSRLFRISFTGELGFEINVPARHGKALWEKLWEAGQQYDICP 844 Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 H LR G + D T+ P DA + I K ++G+ + R Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGIGW--AIGKAKPDFVGKRSLQRPDIVA 901 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKKALA 240 RK+ + + D + G+ I+ D + IG + + L Sbjct: 902 PGRKQLVGLLTEDPKTVLAEGAQIVDDPKQAKPMKMIGHVTSSYWSETLG 951 >gi|254480488|ref|ZP_05093735.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] gi|214039071|gb|EEB79731.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma proteobacterium HTCC2148] Length = 805 Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAIL--TPQGKILLYFLISKIEEDTFIL 67 ++ G A FL + + LP + R L P G I+ I++I E+ F L Sbjct: 491 EISGADAHTFLNRLSSN---KLPGRDGRLGLTLFHGPNGGIMTEQSITRINEEQFYL 544 >gi|118795262|ref|XP_322034.3| AGAP001124-PA [Anopheles gambiae str. PEST] gi|116116686|gb|EAA01036.3| AGAP001124-PA [Anopheles gambiae str. PEST] Length = 415 Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73 + GK I ++I TAD+ L + G IL +++++ +D + + S+ Sbjct: 93 LKGKDVISCFESICTADIKGLRNGTGTLTVFTNSSGGILDDLIVNRVADDVLYVVSNASR 152 Query: 74 RD 75 +D Sbjct: 153 KD 154 >gi|222149771|ref|YP_002550728.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4] gi|221736753|gb|ACM37716.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4] Length = 997 Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T +L R + G I ++ ++ ED F Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNPWDSLKPGKCRYGIMTRDDGFIYDDGVVGRLAEDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + +++ + Y Sbjct: 724 VTTTTGGAARVLNHMEDY 741 >gi|16263621|ref|NP_436414.1| aminomethyltransferase [Sinorhizobium meliloti 1021] gi|14524330|gb|AAK65826.1| aminomethyltransferase [Sinorhizobium meliloti 1021] Length = 418 Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 22/52 (42%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 + G A + +I D+ L + G ++ L+ +++E+TF Sbjct: 77 IAGPDAEAMMDRLIPRDIRKLQVGQIYYAPWCDENGYVVGDGLVFRMDENTF 128 >gi|192292739|ref|YP_001993344.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas palustris TIE-1] gi|192286488|gb|ACF02869.1| glycine cleavage system T protein [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 36.7 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61 S+ I++ G + A L+A+I D++ LP R + G IL +++ + Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118 Query: 62 EDTFILEIDRSKRDSLIDKLL 82 D L ++ + + L Sbjct: 119 -DRLFLVVNAACKTEDEAHLR 138 >gi|330815072|ref|YP_004358777.1| Glycine cleavage system T protein [Burkholderia gladioli BSR3] gi|327367465|gb|AEA58821.1| Glycine cleavage system T protein [Burkholderia gladioli BSR3] Length = 372 Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 28/196 (14%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S+ + G+ A F + I +V L A S +L P+G ++ ++ E F Sbjct: 52 SHMCVVDFRGERARTFFEHAIANNVGKLHTPGKALYSCLLNPEGGVIDDLIVYYFTETFF 111 Query: 66 ILEIDRSKRDSLIDKLLF------YKL-----RSNVIIEIQPINGVVLSWNQEHTF---- 110 ++ + I + L R II +Q N +W+ Sbjct: 112 RTVVNAGTAEKDIAWFQRLNEEGGFGLEITPRRELAIIAVQGPNARAKAWDTVPAARAAT 171 Query: 111 ----SNSSFIDERFSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPNTDF 160 ++ D+ + RT E AS ++ + I HG+ Sbjct: 172 SELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPASHVQALWDALIAHGVRPAG--L 229 Query: 161 LPSTIFPHDALMDLLN 176 +A M+L Sbjct: 230 GARDTLRLEAGMNLYG 245 >gi|303320227|ref|XP_003070113.1| glycine cleavage system T protein [Coccidioides posadasii C735 delta SOWgp] gi|240109799|gb|EER27968.1| glycine cleavage system T protein [Coccidioides posadasii C735 delta SOWgp] Length = 489 Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52 L N++ + + G S+ LQ+++T D+ TL + R L P G ++L Sbjct: 233 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 291 Query: 53 LYFLISKIEEDTFILEIDRSK 73 + ED F + I Sbjct: 292 IS-RTGYTGEDGFEISIPTDH 311 >gi|224826914|ref|ZP_03700013.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002] gi|224600901|gb|EEG07085.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002] Length = 998 Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G + + +++ E F+ Sbjct: 665 STLGKIDIQGPDATTLLNWLYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTTRLAEHHFL 724 Query: 67 LEIDRSKRDSLIDKLLF 83 + +++ + Sbjct: 725 MTTTTGGAARVLNWMER 741 >gi|320031962|gb|EFW13919.1| glycine cleavage system T protein [Coccidioides posadasii str. Silveira] Length = 489 Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52 L N++ + + G S+ LQ+++T D+ TL + R L P G ++L Sbjct: 233 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 291 Query: 53 LYFLISKIEEDTFILEIDRSK 73 + ED F + I Sbjct: 292 IS-RTGYTGEDGFEISIPTDH 311 >gi|319441636|ref|ZP_07990792.1| glycine cleavage system T protein (aminomethyltransferase) [Corynebacterium variabile DSM 44702] Length = 873 Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 52/281 (18%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK--IARGSAILTPQGKILLYFLISK 59 + +++ + I V G A FL+ + + + S +L G +L +++ Sbjct: 547 ALYDMTSLTRILVRGAGATEFLEEQCSNLIDKPVGRTLPVVYSLLLDEAGGVLSDVTVTR 606 Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKL-RSNVII-EIQPINGVVLSWNQ----------E 107 + ++ ++L ++ + + +L + R V + +I + W E Sbjct: 607 LGDEEYMLGVNGA---MDVTRLTTRAVGRGAVTVDDITTSTCCLGLWGPRARDILTPLVE 663 Query: 108 HTFSNSSF---------------IDERFSIADVLLHRTWGHNEK---------------- 136 SN + +R S L + Sbjct: 664 GDISNDGLKYFRGQKMFIAGVPVLIQRVSYVGDLGWEIYTPAAHGLRLWDAVSAAGAVHG 723 Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRI 194 + + ++ LR G V D P DA +D + G + GQ+ ++ Sbjct: 724 LVPAGRLAFNSLRTEKGYVSWGADVTRENT-PADAGLDFAVKGADRKPTPFTGQDALAEQ 782 Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235 R + + P +GSP+ D G G Sbjct: 783 PSRGMSL-VTFVARLDAGTPEAGSPVRVGDATGWVTGADSG 822 >gi|332717055|ref|YP_004444521.1| sarcosine oxidase alpha subunit [Agrobacterium sp. H13-3] gi|325063740|gb|ADY67430.1| sarcosine oxidase alpha subunit [Agrobacterium sp. H13-3] Length = 996 Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 S I+V G A+ F+ + T L R +L G I +I ++ ED F Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWSKLAPGRCRYGLLLGDDGFIRDDGVIGRMTEDRF 722 >gi|331019496|gb|EGH99552.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 805 Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 + +S + + G A L + T L P +R + + QG ++ + ++ E Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699 Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112 F + S D + ++L + + + ++I + + + N S Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748 >gi|259416964|ref|ZP_05740884.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B] gi|259348403|gb|EEW60180.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B] Length = 981 Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A L + T TL R +L G ++ +++ E+ Sbjct: 646 CDVSTLGKIDIQGPDAAKLLDLVYTNLFSTLKLGRVRYGLMLREDGFVMDDGTTARLGEN 705 Query: 64 TFILEIDRSKRDSLIDKL 81 +++ + ++ L Sbjct: 706 HYVMTTTTAAAGQVMAHL 723 >gi|313619089|gb|EFR90893.1| aminomethyltransferase [Listeria innocua FSL S4-378] Length = 107 Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKA 238 +IG++ + + + + RK I +P P+ +D EIG + Sbjct: 10 FIGKQALIKQKEAGLTRKLVGIELIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIG 69 Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASF 268 LA+ ID + + + + + +VKA Sbjct: 70 LAL--IDTAYTELDQELEVGIRNKKVKAKV 97 >gi|218680811|ref|ZP_03528708.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium etli CIAT 894] Length = 289 Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + G AI L I T D+ + + +A+L +G ++ + ++++L Sbjct: 59 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYAAMLNDRGHFTDDCIVYRTGPNSWML 114 >gi|104780577|ref|YP_607075.1| glycosidase [Pseudomonas entomophila L48] gi|95109564|emb|CAK14265.1| putative glycosidase, family 5 [Pseudomonas entomophila L48] Length = 392 Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 19/132 (14%) Query: 29 ADVLTLPYKIARGSAILTPQG------KILLY--------FLISKIEEDTFILEIDRSKR 74 LP A A+ +G ++ FL+ ++ ++E D + Sbjct: 34 NSFNRLPPDQAYFDAL---KGYGASWVRLSYDKWRPARRDFLLGDADDYQGLVEADLKQL 90 Query: 75 DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134 +++D+ L V+I + G+ + N F + + D+RF R Sbjct: 91 VAVLDRAHAAGL--KVVITPLSLPGMRWAQNNHGQFDDRLWQDKRFWEQSARFWRDLARA 148 Query: 135 EKIASDIKTYHE 146 K I Y+ Sbjct: 149 LKDHPAIAAYNL 160 >gi|300780790|ref|ZP_07090644.1| aminomethyltransferase [Corynebacterium genitalium ATCC 33030] gi|300532497|gb|EFK53558.1| aminomethyltransferase [Corynebacterium genitalium ATCC 33030] Length = 362 Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 38/106 (35%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 LS+ I V G A +L ++ + + L A+ S I+ G I+ + K +D F Sbjct: 48 LSHMGEIDVKGPDAGAYLDYVLISSLSALKVGKAKYSMIVNDDGGIIDDLITYKFADDHF 107 Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111 ++ + ++ +V I +++ Sbjct: 108 MVVPNAGNTGAVWAAFEARVGDFDVEIRNDSEAVALVAVQGPRALE 153 >gi|119477616|ref|ZP_01617766.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2143] gi|119449119|gb|EAW30359.1| glycine cleavage system T protein [marine gamma proteobacterium HTCC2143] Length = 373 Score = 36.7 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 35/77 (45%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ GK L+ ++ D+ +LP + + I+ +I++ +D F Sbjct: 53 SHMGQLRIKGKGITEALEKLVPVDLASLPLLKQTYAVFTNNEAGIIDDLIITRWADDEFF 112 Query: 67 LEIDRSKRDSLIDKLLF 83 L ++ + + ID L Sbjct: 113 LVVNAGCKLNDIDHLQK 129 >gi|254452949|ref|ZP_05066386.1| dimethylglycine dehydrogenase [Octadecabacter antarcticus 238] gi|198267355|gb|EDY91625.1| dimethylglycine dehydrogenase [Octadecabacter antarcticus 238] Length = 796 Score = 36.3 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 L N ++ G A +L I+ + + + +L+ +GK+L F +S + +D F Sbjct: 484 LHNFGKYRITGPKARDWLNRIMAGRIPKI--GRLALTPMLSHKGKLLGDFTVSCLADDKF 541 Query: 66 IL 67 L Sbjct: 542 HL 543 >gi|254513145|ref|ZP_05125211.1| dimethylglycine dehydrogenase [Rhodobacteraceae bacterium KLH11] gi|221533144|gb|EEE36139.1| dimethylglycine dehydrogenase [Rhodobacteraceae bacterium KLH11] Length = 809 Score = 36.3 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A +L ++ + L S +L +G + + I + +D F L Sbjct: 498 TVRGPGAAQWLDGLMANKLPKL--GRMTLSLMLNDKGGMDAEYTIVRKAQDDFYL 550 >gi|227495818|ref|ZP_03926129.1| glycine cleavage system aminomethyltransferase T [Actinomyces urogenitalis DSM 15434] gi|226834640|gb|EEH67023.1| glycine cleavage system aminomethyltransferase T [Actinomyces urogenitalis DSM 15434] Length = 422 Score = 36.3 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 88/275 (32%), Gaps = 49/275 (17%) Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69 + I V G A L+ ++T +A+ E+ + Sbjct: 153 ALIAVQGPRAEEVLRGVVT-------SGAGIQAAL---------------RPEEPADEDC 190 Query: 70 DRSKR--DSLIDKLLFY-KLRS-----NVIIE---IQPINGVVLSWNQEHTFSNSSFIDE 118 +++ +L +Y +R+ +V++ +G L E S I + Sbjct: 191 GADVLCGPTILRRLRYYAAVRATAAGHSVLLARTGYTGEDGFELFCEAEAAEDLWSVITD 250 Query: 119 RFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176 + G + LR+ G+ + I P DA + + Sbjct: 251 HAATLAPTPAAQEGETLAALTPCGLAARDSLRLEAGMPLYGHELT-EEITPFDASLGAV- 308 Query: 177 GISLTKGCYIG-QEVVSRIQHRNII-RKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGV 232 + L K ++G Q + +R + K + + G +G +L +D IG++ Sbjct: 309 -VKLAKSEFVGRQALAARAEREGQPGTKVLVALAGEGRRAARAGCTVLGSDGQAIGSVTS 367 Query: 233 VV------GKKALAIARIDKVDH-AIKKGMALTVH 260 + ALA+ ++ A G L V Sbjct: 368 GLLSPTLGHPIALALVAPASLEEPAWAPGTELAVD 402 >gi|255262503|ref|ZP_05341845.1| dimethylglycine dehydrogenase [Thalassiobium sp. R2A62] gi|255104838|gb|EET47512.1| dimethylglycine dehydrogenase [Thalassiobium sp. R2A62] Length = 801 Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +V G A +L I+ + S +L+P+G++L F IS + +D F L Sbjct: 491 EVHGPGARDWLDRIMAGRIPK--PGRLSLSPMLSPKGRLLGDFTISCLADDQFQL 543 >gi|149201556|ref|ZP_01878530.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] gi|149144604|gb|EDM32633.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius sp. TM1035] Length = 370 Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 98/308 (31%), Gaps = 65/308 (21%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 +++ G A +Q + D+ + I+ G +L + K+ ED + + I Sbjct: 66 VELRGPDAGRLMQMLTPRDLRGMTPGQCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125 Query: 72 SKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----------- 118 S L+ + R +V+++ ++ + + + + F D Sbjct: 126 S---DLLYWVKGIAQGWRLDVLVDEPEVSPLAIQGPRADDLMAAVFGDAVRDVRFFRFGH 182 Query: 119 -RFSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINH 151 F D+++ R+ + + ++ L RI Sbjct: 183 FDFQGRDMVIARSGYSKQGGFEIYVEGGDIGMPLWNALMEAGKSMDVHAGCPNLIERIEG 242 Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211 G++ D PH+ + GC IG++ + R+ +++ I Sbjct: 243 GLLSYGNDMTDDNT-PHECGLGKFCNTHTAIGC-IGRDALLRVAKEGPVQQIRAIAIEGT 300 Query: 212 DLPPSGS--PILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGV 262 +PP P+L++ +G + A+ + R+ + G Sbjct: 301 AVPPCREWWPVLSEKGARVGRVSSATWSPDFATNVAIGMMRMTHWEA-----------GT 349 Query: 263 RVKASFPH 270 ++ P Sbjct: 350 ELRVVTPD 357 >gi|170748903|ref|YP_001755163.1| sarcosine oxidase alpha subunit family protein [Methylobacterium radiotolerans JCM 2831] gi|170655425|gb|ACB24480.1| sarcosine oxidase, alpha subunit family [Methylobacterium radiotolerans JCM 2831] Length = 995 Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A F+ + L R +L G IL +++++ + F Sbjct: 662 STLGKIEIVGPDAAEFMNRLYINPWAKLEPGRCRYGLMLKEDGYILDDGVVARVSPECFH 721 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 722 VTTTTGGAARVLAHMEDY 739 >gi|70607139|ref|YP_256009.1| glycine cleavage system aminomethyltransferase T [Sulfolobus acidocaldarius DSM 639] gi|68567787|gb|AAY80716.1| aminomethyltransferase [Sulfolobus acidocaldarius DSM 639] Length = 351 Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 7 SNQSFIKVCGKSAI-PFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDT 64 S+ +KV G FL ++ ++ G +A L +G +I K+ E+ Sbjct: 49 SHMGRLKVSGNQNELEFL---VSKEISKNKPNSMIGPTAFLNDKGGFEDDVMIYKVSENE 105 Query: 65 FILEIDRSKRDSLIDKLLF 83 F++ + R+ +I+ + Sbjct: 106 FLIVTNAINREKIINWIGK 124 >gi|327289405|ref|XP_003229415.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial-like [Anolis carolinensis] Length = 879 Score = 36.3 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I G+ A+ LQ + + D+ +P + +L G I ++ + +F + Sbjct: 534 ISSTGEQALDVLQYLFSNDLD-VPVGHIVHTGMLNHSGGYENDCSIVRVNKRSFFMISPT 592 Query: 72 SK 73 + Sbjct: 593 DQ 594 >gi|146341852|ref|YP_001206900.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium sp. ORS278] gi|146194658|emb|CAL78683.1| glycine cleavage system T-protein (aminomethyltransferase) [Bradyrhizobium sp. ORS278] Length = 385 Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ D++ + R + G IL +++ E +L ++ + +++ Sbjct: 77 ADAAAALERLVPQDIVGMSAGRQRYAQFTNADGGILDDLMVANFGE-HLVLVVNAACKEA 135 Query: 77 LIDKLL 82 I L Sbjct: 136 DIQLLR 141 >gi|121605577|ref|YP_982906.1| glycine cleavage system T protein [Polaromonas naphthalenivorans CJ2] gi|120594546|gb|ABM37985.1| glycine cleavage system T protein [Polaromonas naphthalenivorans CJ2] Length = 384 Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63 S+ +++ G A ++++ DV+ L R +L +G I+ + Sbjct: 61 SHMGQLRLVGPDAAAAFESLMPVDVIDLAPGRQRYGLLLNDEGGIIDDLMFFNRDHANGG 120 Query: 64 TFILEIDRSKRDSLIDKLL 82 + ++ + + I + Sbjct: 121 DIFVIVNGACKAGDIAHIQ 139 >gi|260429827|ref|ZP_05783803.1| sarcosine oxidase subunit alpha [Citreicella sp. SE45] gi|260419310|gb|EEX12564.1| sarcosine oxidase subunit alpha [Citreicella sp. SE45] Length = 979 Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A+ F+ + T L R + G I +I ++ +D F Sbjct: 647 STLGKIEVVGPDAVEFMNRMYTNPWTKLGVGRCRYGLLCGDDGFIRDDGVIGRMGQDRFH 706 Query: 67 LEIDRSKRDSLID 79 + +++ Sbjct: 707 VTTTTGGAARVLN 719 >gi|254461146|ref|ZP_05074562.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium HTCC2083] gi|206677735|gb|EDZ42222.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium HTCC2083] Length = 979 Score = 36.3 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 9/118 (7%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71 I V G A FL + + R +L G + +++ ED F++ Sbjct: 649 IDVQGADAATFLNKVYCNPFAKVAVGKTRYGLMLREDGIAMDDGTAARLAEDHFVVTTTT 708 Query: 72 SKRDSLIDKLLFYKLR------SNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122 +K + + F +R ++V I +D F I Sbjct: 709 AKAGPVYQHMEF--VRQCLMPDADVQLISTTEAWAQFAVAGPNSRALLQKIVDPEFDI 764 >gi|71032717|ref|XP_766000.1| aminomethyltransferase [Theileria parva strain Muguga] gi|68352957|gb|EAN33717.1| aminomethyltransferase, putative [Theileria parva] Length = 418 Score = 36.3 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%) Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201 TY R+ GI+ P+ D P + H +LM L+ + K G + + R + + Sbjct: 111 DTYDIARLETGIIRPDLDLTPESTPMHCSLMWNLDIHKIRKRIIFGHKHLGRAMVDGVSK 170 Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241 R +I+ P + + IG + + AL + Sbjct: 171 VRVGLISNKMITPSCTILTSSTRMPIGKITSSIFSPALGM 210 >gi|307941647|ref|ZP_07657002.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4] gi|307775255|gb|EFO34461.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4] Length = 383 Score = 36.3 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 55/306 (17%) Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66 + G L+A+ ++++ L R + +L G I+ ++++ + Sbjct: 66 LIGPDHETTARALEALCPSNMVELKPGRQRYTVLLNEDGGIVDDLMVTRPLAAERDGQLF 125 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------IQPINGVVLSWNQEHTFSNSSFID 117 + ++ S++D LL KL NV +E +Q V + + + F+D Sbjct: 126 IVVNASRKDVDYA-LLRDKLPDNVRLELVEDRALIALQGPEAVAVVASHAPAAAELGFMD 184 Query: 118 ERFSIADVL---------------------------LHRTWGHNEKIASDIKTYHELRIN 150 F D + + LR+ Sbjct: 185 ADFMELDGIDCHISRSGYTGEDGVEMSVPAGAAEAIAKALLADERVKPIGLGARDSLRME 244 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D T P + + + +G + G + + R R Sbjct: 245 AGLCLYGHDL-DETTSPVEGSITFAMQKRRREEGGFPGAAHIQKELAEGPSRVRVGFKLD 303 Query: 210 TDDLPPSGSPI-LTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262 G+ I L D IGT+ G A +A+ +D + + L V Sbjct: 304 GKAPAREGAEIRLPDGTVIGTVTS--GGFAPTMGAPIAMGYVDAAHSELGTKVNLVVRNR 361 Query: 263 RVKASF 268 + A Sbjct: 362 ELPAQV 367 >gi|326316924|ref|YP_004234596.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373760|gb|ADX46029.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 378 Score = 36.3 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G A + ++ DV+ L R +L G I+ + +D F+ Sbjct: 59 SHMGQLRLVGADAAAAFETLVPVDVIGLGVGKQRYGLLLNDAGGIIDDLMFVNRGDDLFV 118 Query: 67 L 67 + Sbjct: 119 I 119 >gi|255018534|ref|ZP_05290660.1| glycine cleavage system aminomethyltransferase T [Listeria monocytogenes FSL F2-515] Length = 127 Score = 36.3 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 10/105 (9%) Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203 LR+ + + I P +A ++ + L K +IG+E + + + +IRK Sbjct: 9 DTLRLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLIRKL 65 Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242 I +P P+ ++ +IG + LA+ Sbjct: 66 VGIELIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLALI 110 >gi|220923309|ref|YP_002498611.1| sarcosine oxidase subunit alpha family protein [Methylobacterium nodulans ORS 2060] gi|219947916|gb|ACL58308.1| sarcosine oxidase, alpha subunit family [Methylobacterium nodulans ORS 2060] Length = 995 Score = 35.9 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 30/78 (38%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I++ G A F+ + L L R +L G IL +++++ +D F Sbjct: 662 STLGKIEIVGPDAAEFMNRMYVNPWLKLEPGRCRYGLMLKEDGYILDDGVVARVSKDCFH 721 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 722 VTTTTGGAPRVLAHMEDY 739 >gi|154246144|ref|YP_001417102.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2] gi|154160229|gb|ABS67445.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2] Length = 381 Score = 35.9 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 90/287 (31%), Gaps = 51/287 (17%) Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFILEIDRSKRDSLIDKLLFY 84 AD L L R S +L G I+ F++++ + T IL ++ + + + + Sbjct: 81 ADFLNLAPGRQRYSQLLAEDGGIIDDFMVTRPLAPEADGTLILVVNAACKAGDFAHIAAH 140 Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTF------SNSSFID----------------ERFSI 122 L V + +P ++ E ++ +D R Sbjct: 141 -LPEGVALVERPERALLALQGPEAAAVMARHCPEAATLDFMAAIPTEFDGIPVEVSRSGY 199 Query: 123 ADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168 NE A + LR+ G+ D ST P Sbjct: 200 TGEDGFEISVENESAPLLWAALLAEPEVKAIGLGARDSLRLEAGLCLYGHDIDLSTS-PI 258 Query: 169 DALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227 +A ++ + T+G + G + R + R R + G+ I +D + Sbjct: 259 EAALNWSIQKRRRTEGGFPGDARIQRELAQGPARVRVGLRLEGRAPAREGAEIASDGAVV 318 Query: 228 GTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268 G + G A +A+ + A + + V G + A+ Sbjct: 319 GRVTS--GGFAPTLGAPIAMGYVPPALSAPGTRLDVLVRGKALAATV 363 >gi|148240793|ref|YP_001226180.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. WH 7803] gi|166221574|sp|A5GPL8|GCST_SYNPW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein gi|147849332|emb|CAK24883.1| Glycine cleavage system T protein [Synechococcus sp. WH 7803] Length = 369 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 24/56 (42%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 S+ +++ G + LQ ++ D+ + A S +L G I ++ + + Sbjct: 51 SHMGVLRIEGSNPKDALQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLIVYDLGQ 106 >gi|86608619|ref|YP_477381.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557161|gb|ABD02118.1| glycine cleavage system T protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 374 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64 S+ + G L ++ +D+ +P R + +L P G IL + + + Sbjct: 54 SHMGKFTLWGPELGSHLSRLVPSDLSAVPVGSGRYTVLLNPLGGILDDVIFYRHPPEG 111 >gi|325962227|ref|YP_004240133.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3] gi|323468314|gb|ADX71999.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3] Length = 382 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 16/75 (21%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59 LS+ + V G A FL D + + A+ S I G I+ + + Sbjct: 50 LSHMGEVWVTGPDAAAFL------DYALVGKISAMAVGKAKYSLICNEDGGIIDDLITYR 103 Query: 60 I----EEDTFILEID 70 + + L + Sbjct: 104 RPAAEDGNDVFLVVP 118 >gi|319783098|ref|YP_004142574.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168986|gb|ADV12524.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 811 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 13 KVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 +V G A +L I+ LP + LTP G + +++++++ D F L Sbjct: 497 EVGGPGAEGWLDGILAN---RLPRPGRVALAHHLTPTGGVQAEYVVARLQSDLFYL 549 >gi|315647598|ref|ZP_07900700.1| glycine cleavage system T protein [Paenibacillus vortex V453] gi|315277037|gb|EFU40378.1| glycine cleavage system T protein [Paenibacillus vortex V453] Length = 109 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 5/96 (5%) Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG- 235 + L G +IG+E + + ++ + RK I +P S P+ ++ IG + Sbjct: 1 MKLDSGDFIGREALQQQKNAGVPRKLVGIELIDRGIPRSHYPVFNSEGEPIGEVTSGTQS 60 Query: 236 ---KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 K+ L +A I+ ++ + + + G ++KA Sbjct: 61 PTLKRNLGLALIETAYTSLDSEVWVEIRGKKLKAKV 96 >gi|163747455|ref|ZP_02154807.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus indolifex HEL-45] gi|161379308|gb|EDQ03725.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus indolifex HEL-45] Length = 978 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A L + T TL R ++ G ++ +++ E Sbjct: 643 CDVSTLGKIDIQGADAAKLLDLVYTNTFNTLKVGKVRYGLMMREDGFVMDDGTCARLGEQ 702 Query: 64 TFILEIDRSKRDSLIDKLLF 83 F++ ++ L F Sbjct: 703 HFLMTTTTGAAGQVMRHLEF 722 >gi|260432666|ref|ZP_05786637.1| FAD dependent oxidoreductase/aminomethyl transferase [Silicibacter lacuscaerulensis ITI-1157] gi|260416494|gb|EEX09753.1| FAD dependent oxidoreductase/aminomethyl transferase [Silicibacter lacuscaerulensis ITI-1157] Length = 811 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 15/186 (8%) Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149 V I + GV S + + A + L + + +R+ Sbjct: 619 VGIAPATVMGVSFSGELAY---EIHVPNASLYAAYLALRQAGQAFGLQLFGARAVESMRM 675 Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIIT 208 + D + P + + + L K +IG+ + Q + RK + + Sbjct: 676 EKTFLHWKADLITE-FDPFETGLHRF--VRLDKPQFIGRAALIERQAKGPSRKLVALQVQ 732 Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262 T G+ ++ +D +GT+ G LA A ++ A M L + G Sbjct: 733 ATHAPAHPGASLMAEDRVVGTVTS--GDWGHRTGLNLAHAFVEPHLSAEGSEMMLDLCGD 790 Query: 263 RVKASF 268 RV A Sbjct: 791 RVPARV 796 >gi|222106586|ref|YP_002547377.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] gi|221737765|gb|ACM38661.1| glycine cleavage system T protein aminomethyltransferase [Agrobacterium vitis S4] Length = 472 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 14 VCGKSAIPFL--QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A FL I A+ +TP G ++ +I + +D FIL Sbjct: 65 VEGPDAEKFLSHHGI--NSFANFDLNRAKHFVSVTPNGHVIGDHIIFRERQDKFIL 118 >gi|254472053|ref|ZP_05085454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062] gi|211959255|gb|EEA94454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062] Length = 380 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 89/309 (28%), Gaps = 56/309 (18%) Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66 + G L+ ++ +++ L R + +L G I+ ++S+ ++ + Sbjct: 63 LVGPDHATTAAALETLVPSNMKELKPGKQRYTVLLNDNGCIIDDLMVSRPLAAEDDGRLM 122 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109 L ++ + +D+ ++ L NV +EI ++ + Sbjct: 123 LVVNAACKDNDYK-IIAAALPDNVKLEIVEDRALIAIQGPKAAEVMALHAPEAAEMGFME 181 Query: 110 -----FSNSSFIDERFSIADVLLHR--------------TWGHNEKIASDIKTYHELRIN 150 F S I R + + LR+ Sbjct: 182 ARPLEFDGISVIASRSGYTGEDGYEISIPAGAAEAVAKALLADERVEPIGLGARDSLRLE 241 Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209 G+ D +T P + + + G + G E V + R ++ Sbjct: 242 AGLCLYGHDIDENTT-PVEGNITFCMQKRRKEAGDFPGGERVLKQLAEGTENLRVGLLLD 300 Query: 210 TDDLPPSGSPILTDDIE--IGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHG 261 G+ I E IG + G +A+ + I + L V G Sbjct: 301 GRAPAREGAEIRVPGSEEVIGRVTS--GGFGPTLGAPVAMGYVPSKLAEIGTEVELVVRG 358 Query: 262 VRVKASFPH 270 +KA Sbjct: 359 RALKAKVAE 367 >gi|258568996|ref|XP_002585242.1| glycine cleavage system T protein [Uncinocarpus reesii 1704] gi|237906688|gb|EEP81089.1| glycine cleavage system T protein [Uncinocarpus reesii 1704] Length = 391 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 15/89 (16%) Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52 L N++ + + G S+ LQA++T D+ TL + R L+ P G ++L Sbjct: 135 LDNRALLALQGPSSAAVLQALVTQGEASVESDLSTLHFGQCRQ-LHLSFPDGSHTPARLL 193 Query: 53 LYFLISKIEEDTFILEIDRSKRDSLIDKL 81 + ED F + I + L ++ Sbjct: 194 IS-RTGYTGEDGFEISIPTEQDAQLPRRI 221 >gi|195456896|ref|XP_002075335.1| GK15723 [Drosophila willistoni] gi|194171420|gb|EDW86321.1| GK15723 [Drosophila willistoni] Length = 969 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 587 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 645 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 646 RSMCWIRKHMPAHLRAKVNVAD 667 >gi|323456399|gb|EGB12266.1| hypothetical protein AURANDRAFT_20469 [Aureococcus anophagefferens] Length = 414 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 12/92 (13%) Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAI--------ITA---DVLTLPYKIARGSAILTPQGK 50 S +S+ IK G FL+ + TA DV L R + + +G Sbjct: 70 SLFDVSHMGQIKWTGADRAKFLERVRPRPASRAATAVVGDVAGLGDGEGRLTLLTNAEGG 129 Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82 IL +++ D + ++ + + + L Sbjct: 130 ILDDCVLANAG-DYVYMVVNGACKVGDMAHLQ 160 >gi|221484514|gb|EEE22808.1| aminomethyltransferase, putative [Toxoplasma gondii GT1] Length = 1658 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61 + G+ + L +++ D+ + A+ + +L +G +L ++K+ Sbjct: 1200 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1253 >gi|118590749|ref|ZP_01548150.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614] gi|118436725|gb|EAV43365.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614] Length = 383 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 8/101 (7%) Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66 + G L+A+ ++ + L + R + +L +G I+ ++++ E+ + Sbjct: 66 LIGPDHETTARALEALTPSNFVELGHGRQRYTVLLNDEGGIIDDLMVTRPLSEDEDGKLM 125 Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107 L ++ S++D L +L NV +E+ ++ E Sbjct: 126 LVVNASRKDVDYAHL-RERLPDNVTLEVIEDRALIAVQGPE 165 >gi|89054979|ref|YP_510430.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1] gi|88864528|gb|ABD55405.1| dimethylglycine dehydrogenase [Jannaschia sp. CCS1] Length = 806 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G A +L ++ + + +L+P+G+I+ F ++ + E+ F+L Sbjct: 492 VQGPGARAWLDRVLAGRIPK--PGRLSLTPMLSPKGRIIGDFTVTCLSEEHFLL 543 >gi|134287792|ref|YP_001109958.1| sarcosine oxidase alpha subunit family protein [Burkholderia vietnamiensis G4] gi|134132442|gb|ABO60177.1| sarcosine oxidase, alpha subunit family [Burkholderia vietnamiensis G4] Length = 998 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 55/272 (20%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I + G A L + T L R +L G + + ++ E ++ Sbjct: 665 STLGKIDIQGPDAATLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYV 724 Query: 67 LEIDRSKRDSLIDKLLF----------------------YKL----RSNVIIEIQ-PING 99 + +++ + + + V+ +I I+ Sbjct: 725 MTTTTGGAARVLNWMERWLQTEWPNLNVHLTSVTDHWATFAVVGPKSRKVLQKICKDIDF 784 Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI---- 141 ++ +E T + R S + L W +D Sbjct: 785 ANGAFPFMTYREGTVAGVPARVMRISFSGELAYEVNVPANFGRGVWEALMAAGADFDITP 844 Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198 +T H LR G + D +I P D M G+ K C +G+ +SR Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGMVAKKDC-LGKRSLSRTDTAK 899 Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIEIG 228 RK+ + + D + G+ I+ G Sbjct: 900 AGRKQFVGLRSIDPRVVLTEGAQIVPTPTPQG 931 >gi|294633939|ref|ZP_06712496.1| aminomethyltransferase [Streptomyces sp. e14] gi|292830191|gb|EFF88543.1| aminomethyltransferase [Streptomyces sp. e14] Length = 448 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 14 VCGKSAIPFL--QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + G A L T D A+ +T GKI+ ++++ ED ++L Sbjct: 65 IEGPDATRVLAEHG--TNDFEKFAIGQAKQYVPVTRDGKIVTDGILARHAEDKYLL 118 >gi|241206344|ref|YP_002977440.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860234|gb|ACS57901.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 997 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ +D F Sbjct: 664 STLGKIEVVGPDAAEFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|116253860|ref|YP_769698.1| sarcosine oxidase alpha subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115258508|emb|CAK09612.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 997 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S I+V G A FL I T TL AR + G + ++ ++ +D F Sbjct: 664 STLGKIEVVGPDAAEFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723 Query: 67 LEIDRSKRDSLIDKLLFY 84 + ++ + Y Sbjct: 724 VTTTTGGAPRVLHHMEDY 741 >gi|195477143|ref|XP_002100107.1| GE16342 [Drosophila yakuba] gi|194187631|gb|EDX01215.1| GE16342 [Drosophila yakuba] Length = 938 Score = 35.6 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E F++ ++ Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHFMMIAPTIQQT 628 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650 >gi|159045222|ref|YP_001534016.1| aminomethyltransferase, glycine cleavage system T protein [Dinoroseobacter shibae DFL 12] gi|157912982|gb|ABV94415.1| aminomethyltransferase, glycine cleavage system T protein [Dinoroseobacter shibae DFL 12] Length = 361 Score = 35.6 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 79/265 (29%), Gaps = 45/265 (16%) Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 S+ +++ G L+ ++ + +L AR + + T G I ++++ ++ Sbjct: 51 SHMCQMEITGDDPAAALERLVPGGITSLAPGQARYTQLTTGAGGIYDDLIVTRDPGGLYV 110 Query: 67 L------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115 + + D + + + + +I +Q L + F Sbjct: 111 VANASMADQDVGLLRAGLPDCTLRVIEDHALIAVQGPAAAALVAGLVPAAEDLRFMQSAQ 170 Query: 116 -----IDERFSIADVLL----------------HRTWGHNEKIASDIKTYHELRINHGIV 154 D R S R + + + LR+ G+ Sbjct: 171 AAWDGQDLRLSRLGYTGEDGFEISLPATAAEAFARALIAGGAMPAGLGARDTLRMEAGLP 230 Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMIITG 209 D T P +A + G S+ K G + G + R R + + Sbjct: 231 LYGQDIDQGTS-PPEAGL----GFSIPKRRRAEGGFPGAARILGELADGPAR-RLVGLRP 284 Query: 210 TDDLPP-SGSPILT-DDIEIGTLGV 232 P +G I D +GT+ Sbjct: 285 EGRAPVRAGVEITAPDGTPLGTVTS 309 >gi|311112293|ref|YP_003983515.1| dihydrolipoyllysine-residue acetyltransferase [Rothia dentocariosa ATCC 17931] gi|310943787|gb|ADP40081.1| dihydrolipoyllysine-residue acetyltransferase [Rothia dentocariosa ATCC 17931] Length = 496 Score = 35.6 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 6/119 (5%) Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFS 111 + +++D S+ I +L + V + + + W E T++ Sbjct: 290 FSAPHMSIFVDVDASRTMEFIKRLKKSRHFEGVKVTPLLVLAAAVIWAAERNPQVNATWT 349 Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170 +S +RF + G D + + + + T P + Sbjct: 350 DSEIQIKRFMNLGIAAATPRGLMVPNIKDAQELSLRELAIALNNLTTRAREGKTQPAEM 408 >gi|221504712|gb|EEE30377.1| aminomethyltransferase, putative [Toxoplasma gondii VEG] Length = 1475 Score = 35.6 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61 + G+ + L +++ D+ + A+ + +L +G +L ++K+ Sbjct: 1017 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1070 >gi|195565049|ref|XP_002106119.1| GD16688 [Drosophila simulans] gi|194203490|gb|EDX17066.1| GD16688 [Drosophila simulans] Length = 938 Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650 >gi|28571104|ref|NP_572162.2| CG3626 [Drosophila melanogaster] gi|28381559|gb|AAF45943.3| CG3626 [Drosophila melanogaster] Length = 939 Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 571 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 629 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 630 RSMCWIRKHMPNHLRAKVNVAD 651 >gi|195340835|ref|XP_002037018.1| GM12342 [Drosophila sechellia] gi|194131134|gb|EDW53177.1| GM12342 [Drosophila sechellia] Length = 905 Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650 >gi|237839667|ref|XP_002369131.1| glycine cleavage T-protein domain containing protein [Toxoplasma gondii ME49] gi|211966795|gb|EEB01991.1| glycine cleavage T-protein domain containing protein [Toxoplasma gondii ME49] Length = 1536 Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61 + G+ + L +++ D+ + A+ + +L +G +L ++K+ Sbjct: 1013 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1066 >gi|194888194|ref|XP_001976874.1| GG18704 [Drosophila erecta] gi|190648523|gb|EDV45801.1| GG18704 [Drosophila erecta] Length = 938 Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650 >gi|56709092|ref|YP_165137.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] gi|56680777|gb|AAV97442.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] Length = 803 Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66 ++ G A L + + + +LT +G+ I +I E+ + Sbjct: 492 EITGTDAGKLLNRLSANRIPH-KDGRMSLNHLLTEKGRFETEITIWRINENRYF 544 >gi|85703172|ref|ZP_01034276.1| aminomethyl transferase family protein [Roseovarius sp. 217] gi|85672100|gb|EAQ26957.1| aminomethyl transferase family protein [Roseovarius sp. 217] Length = 802 Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 V G +A +L I+ + + +L+P+G++ F +S + E++F L Sbjct: 492 VSGPNARSWLDRIMAGRIPK--PGRLSLTPMLSPKGRLWGDFTLSCLNEESFQL 543 >gi|126740278|ref|ZP_01755967.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] gi|126718733|gb|EBA15446.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6] Length = 381 Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 29/56 (51%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + V G+ A + + T +V + + ++IL QGK + +I ++ +++++ Sbjct: 62 VHVMGEHAAQVIDRVTTRNVEKIMPGRSTYASILNDQGKFVDDCIIYRLSVNSWMV 117 >gi|2921867|gb|AAC04876.1| glycine cleavage system T-protein [Drosophila heteroneura] Length = 148 Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%) Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72 V G A L++I TAD+L + + QG IL +++K+ + + + + Sbjct: 90 VRGNDAAACLESISTADILGMLPGAGSLTVFTNEQGCILDDLIVNKVSDKELYVVSNAA 148 >gi|56695457|ref|YP_165805.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] gi|56677194|gb|AAV93860.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3] Length = 811 Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62 + ++ + +V G A+ FL + + + L G+ F ++++ E Sbjct: 484 LIDFTSFAKWEVSGAGAMAFLDRALANAMPK-RDGRVTLAHALDENGRFCAEFTVARLAE 542 Query: 63 DTFILEIDRSKRDSLIDKLLFYKLR 87 D F + + + D +L +LR Sbjct: 543 DRFYI-CGPAFSEVHDDHVLRSRLR 566 >gi|322815453|gb|EFZ24106.1| hypothetical protein TCSYLVIO_9775 [Trypanosoma cruzi] Length = 730 Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 38/177 (21%) Query: 33 TLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII 92 + SA +P G++L L + ++L+++ + + RS++ Sbjct: 51 KMKKNETMVSACWSPSGRLLAIGL---QCGELYLLDVESGDL------IRRFVPRSDIAF 101 Query: 93 EIQPINGVVLSW--------------------NQEHTFSNSSFIDERFSIADVLLHRTWG 132 I+ + LS + S+ ++ TW Sbjct: 102 AIKDADAKTLSGIIDTSAGNEINNNEDNDGIDGDKEDDPLRQPPILPISVDGAIVACTWA 161 Query: 133 HNEKIASDIKTYHEL------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183 S + +++EL ++ I + + P L+D GIS G Sbjct: 162 SVAPSTSALHSHNELCLPLSTAVSSPIFE---ELEREDDIPVMLLLDQRGGISFLPG 215 >gi|194767822|ref|XP_001966013.1| GF19457 [Drosophila ananassae] gi|190622898|gb|EDV38422.1| GF19457 [Drosophila ananassae] Length = 934 Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75 G + LQ + + DV + + + P G ++++ E +++ ++ Sbjct: 568 GNEVVELLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSEKHYMMIAPTIQQT 626 Query: 76 SLIDKLLFYK---LRSNVIIEI 94 + + + LR+ V + Sbjct: 627 RSMCWIRKHMPAHLRAKVNVAD 648 >gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102] Length = 1441 Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 12/121 (9%) Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144 LR ++ + ++ F R A V + G+++ T+ Sbjct: 115 VLRIKAELDRSAPDKIIWFLAPTVALCGQQFDVIRLQAASVPMKLITGNDQVDTWSADTW 174 Query: 145 HELRINHGIVDPNTDFLPSTIFPHDA------LMDLLNGISLTKGCYIGQEVVSRIQHRN 198 I+D + + DA +D L+ I +G + G ++++ HRN Sbjct: 175 DT------ILDGVRVVVSTYQVLLDALCHAFINIDRLSLIIFDEGKHPGSKIMTDFYHRN 228 Query: 199 I 199 Sbjct: 229 K 229 >gi|115523615|ref|YP_780526.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas palustris BisA53] gi|115517562|gb|ABJ05546.1| glycine cleavage system T protein [Rhodopseudomonas palustris BisA53] Length = 383 Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76 A L+ ++ D+ LP R + G IL ++S D L ++ + +++ Sbjct: 76 ADAAAALERLLPQDIAALPLHRQRYAQFTNDSGGILDDLMVSNFG-DHLFLVVNAACKEA 134 Query: 77 LIDKLLFY 84 L + Sbjct: 135 DEAHLRAH 142 >gi|145612761|ref|XP_001412358.1| hypothetical protein MGG_12421 [Magnaporthe oryzae 70-15] gi|145019891|gb|EDK04119.1| hypothetical protein MGG_12421 [Magnaporthe oryzae 70-15] Length = 624 Score = 35.2 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 9/127 (7%) Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205 LR+ G D P +A + + L KG ++G E V R+ +K RP+ Sbjct: 472 LRMEAGFRTYGVDVTTEH-GPFEAGLGA--AVDLGKGGFVGCEAVRRLASEKPAKKLRPI 528 Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261 + + P+ +G + V K LA A + + G+ + G Sbjct: 529 AVDDGRSVVMGKEPVFVSGKAVGYVSSAVFGYTIGKPLAFAWL-PAELGPGAGVEIEYFG 587 Query: 262 VRVKASF 268 R+KA+ Sbjct: 588 RRIKATV 594 >gi|117929054|ref|YP_873605.1| aminomethyltransferase [Acidothermus cellulolyticus 11B] gi|117649517|gb|ABK53619.1| aminomethyltransferase [Acidothermus cellulolyticus 11B] Length = 386 Score = 35.2 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 82/286 (28%), Gaps = 55/286 (19%) Query: 32 LTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91 TL A+ + + G ++ ++ +I F++ + + ++D+L NV Sbjct: 97 DTLAVGRAKYTMMCDENGGVVDDLVVYRISPTDFLVVANAANTAVVVDELRRRCAEFNVE 156 Query: 92 IEIQPINGVVLSWNQEHT-FSNSSFIDE--------RFSIADVLLHRTW----------- 131 + + +++ +DE R + ADV R Sbjct: 157 VRDETTRWCLVALQGPKAVDILRGLLDEQVLELRYYRVTEADVCGRRALVARTGYTGEDG 216 Query: 132 --------------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171 + + LR+ G+ + P A Sbjct: 217 FEIFLDDDPVPLWRAILERGQDAGVLPCGLAARDSLRLEAGMPLYGRELSRDRT-PFHAG 275 Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIITGTDDLPPSGSPILTDDI---EI 227 + + ++L K ++G+ + +++ + + G P + D+ I Sbjct: 276 LGRV--VALDKPNFVGK--AALMRYAAEPPDETLAGLAGVGRRAPRHGDAVYDERGLVRI 331 Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKAS 267 G + A+A R D + + V + Sbjct: 332 GEVTSGAPSPTLGYAIAMAYLRRDYAAPNTPALVDVRGKYEAVTVT 377 >gi|254441181|ref|ZP_05054674.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus 307] gi|198251259|gb|EDY75574.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus 307] Length = 973 Score = 35.2 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 27/78 (34%) Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63 +S I + G A FL + TL R +L G ++ + + + Sbjct: 638 CDVSTLGKIDIQGPDAAAFLDFVYCNTFSTLRENRVRYGLMLREDGHVMDDGTTACLGPN 697 Query: 64 TFILEIDRSKRDSLIDKL 81 +++ + ++ L Sbjct: 698 HYVMTTTTAAAGQVMKHL 715 >gi|114769451|ref|ZP_01447077.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] gi|114550368|gb|EAU53249.1| aminomethyl transferase family protein [alpha proteobacterium HTCC2255] Length = 381 Score = 35.2 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 24/56 (42%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67 + + G A + + T +V + +AIL GK + +I + + +++ Sbjct: 62 VHLVGPDAAYVIDRVTTRNVDKIGVGRCTYAAILNDDGKFIDDCVIYHLNVNQWMV 117 >gi|297197994|ref|ZP_06915391.1| FAD dependent oxidoreductase [Streptomyces sviceus ATCC 29083] gi|297146958|gb|EDY59037.2| FAD dependent oxidoreductase [Streptomyces sviceus ATCC 29083] Length = 702 Score = 35.2 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65 ++V G+ A FL+ + T V + +L G I ++++ D F Sbjct: 500 LEVSGRGAAAFLERLCTGKVAK-SVGSVTYTLLLDHDGGIRSDITVARLAPDVF 552 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.159 0.478 Lambda K H 0.267 0.0486 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,449,742,666 Number of Sequences: 14124377 Number of extensions: 252701966 Number of successful extensions: 566365 Number of sequences better than 10.0: 3923 Number of HSP's better than 10.0 without gapping: 4041 Number of HSP's successfully gapped in prelim test: 1157 Number of HSP's that attempted gapping in prelim test: 555151 Number of HSP's gapped (non-prelim): 7271 length of query: 273 length of database: 4,842,793,630 effective HSP length: 137 effective length of query: 136 effective length of database: 2,907,753,981 effective search space: 395454541416 effective search space used: 395454541416 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 81 (35.6 bits)