BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein
(glycine cleavage) [Candidatus Liberibacter asiaticus str. psy62]
(273 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040268|gb|ACT57064.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter asiaticus str. psy62]
Length = 273
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI
Sbjct: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF
Sbjct: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL
Sbjct: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA
Sbjct: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK
Sbjct: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
>gi|315121784|ref|YP_004062273.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495186|gb|ADR51785.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 271
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/271 (69%), Positives = 229/271 (84%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M SVYLS+QSFIKV GKSA FLQ IITAD+ +LP+ +ARGSA+LTPQGKIL YFLISKI
Sbjct: 1 MPSVYLSSQSFIKVRGKSASTFLQGIITADITSLPFDVARGSALLTPQGKILFYFLISKI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
EED F+LEI++ +RDS I+KLLFYKLRS+V +E+QPING+ LSWNQE ++ SFIDERF
Sbjct: 61 EEDVFVLEINKLQRDSFIEKLLFYKLRSDVALEVQPINGITLSWNQEQAPTSPSFIDERF 120
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
SIA +LLHRTWG+NE+ SD K YHELRIN+GIV+P DF PSTIFPHDALMDL+ GIS
Sbjct: 121 SIAGILLHRTWGYNEESTSDPKEYHELRINYGIVEPIPDFPPSTIFPHDALMDLVKGISF 180
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TKGCY+GQEVVSR+QHRNI+RKRP+IITG + LP +GS + D+ +IGTLG++VG+KALA
Sbjct: 181 TKGCYVGQEVVSRMQHRNIVRKRPIIITGYNALPANGSSLFVDNTKIGTLGIIVGEKALA 240
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IARIDKV +AI+K MALT G++V + P W
Sbjct: 241 IARIDKVSNAIEKNMALTADGIKVTITLPPW 271
>gi|222085402|ref|YP_002543932.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium
radiobacter K84]
gi|221722850|gb|ACM26006.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium
radiobacter K84]
Length = 279
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++SF++V G A PFL +IT D+++L AR A+LTPQGKIL F+IS+
Sbjct: 1 MPAVFLRDRSFLRVTGAEAEPFLHNLITTDLVSLGTDEARPGALLTPQGKILFDFMISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ F+LE D ++RD L+ +L Y+LR+ V + GV ++W D RF
Sbjct: 60 DGPGFLLETDTAQRDGLLKRLTMYRLRAPVDFAVGETEGVTVAWGDNVAEGPR---DSRF 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L RT GH+ A + Y LRI +GI DF FPHD L+DL G+
Sbjct: 117 AKAGIALTRTSGHHGDDAEAL--YEALRIANGIAVSGQDFALQDAFPHDVLLDLNGGLGF 174
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR+ R+R +I+ G+ DLP SG+ + IGTLG + G LA
Sbjct: 175 RKGCYVGQEVVSRMQHRSTARRRVVIVIGSADLPASGTELTAGGKPIGTLGSIEGANGLA 234
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ AI G + G V + P W
Sbjct: 235 IVRIDRAGEAIAAGTPILAAGHEVSVALPVW 265
>gi|86357042|ref|YP_468934.1| putative aminomethyltransferase protein (glycine cleavage)
[Rhizobium etli CFN 42]
gi|86281144|gb|ABC90207.1| putative aminomethyltransferase protein (glycine cleavage)
[Rhizobium etli CFN 42]
Length = 281
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 4/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F++ +
Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIVSLAPDEARPGALLTPQGKILFDFMVWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D ++LE D +RD+L+ +L Y+LR+ V + QP NG+ + W ++ + D RF
Sbjct: 60 DGDGYLLETDAGQRDALLKRLTMYRLRAAVTLTTQPENGITVCWGEDADRIGGAR-DSRF 118
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A V L R G + + A + Y LRI HGIV +DF FPHD LMDL G+S
Sbjct: 119 AKAGVPLRRRAGRHGEDAPSL--YDSLRIRHGIVTSGSDFSLQDAFPHDVLMDLNGGLSF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +G LG V G LA
Sbjct: 177 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPQAGTEITAAGKPVGALGSVEGGSGLA 236
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ +G L V + P W
Sbjct: 237 IVRIDRAGAAMAEGTPLLAGQTPVSLALPPW 267
>gi|325292432|ref|YP_004278296.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium sp. H13-3]
gi|325060285|gb|ADY63976.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium sp. H13-3]
Length = 282
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 5/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+++ I+V G A FL +ITADV LP AR SA+LTPQGKIL FLI++
Sbjct: 1 MPSAFLADRRLIRVSGTGAEEFLNNLITADVENLPQGEARASALLTPQGKILFDFLIARD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++E +++D+L+ +L YKLR+ V ++ +PI GV + W++ + + D RF
Sbjct: 61 GPD-YLIESGAAEQDALLRRLTMYKLRAPVDLKAEPIEGVSVFWSE--SVPEAGAKDGRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L R G + + DI Y LRI HGI + D+ FPHD LMD+ +G+S
Sbjct: 118 AKAGINLFRVPGAS--ASGDITAYDALRIEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQEVVSR++HR R+R + ++ LP +G+ I + +G LG V G LA
Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSAESALPATGTEITVNGKPVGALGTVCGNTGLA 235
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I R D+V A+ L V V + P W
Sbjct: 236 IVRTDRVADALASATPLIAENVPVTVALPAW 266
>gi|190891087|ref|YP_001977629.1| aminomethyltransferase (glycine cleavage) protein [Rhizobium etli
CIAT 652]
gi|190696366|gb|ACE90451.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli CIAT 652]
Length = 290
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLAADEARPGALLTPQGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ + F D RF
Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGISVCWGEDTDGVSLGFRDSRF 127
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L R G + A + Y LRI HGI +DF FPHD LMDL G+S
Sbjct: 128 TKAGLTLTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFSLQDAFPHDVLMDLNGGLSF 185
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G LA
Sbjct: 186 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVDGGSGLA 245
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ +G L G V + P W
Sbjct: 246 IVRIDRAGAAMAEGTPLLAGGTAVSLTLPQW 276
>gi|241203903|ref|YP_002974999.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857793|gb|ACS55460.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 284
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 150/273 (54%), Gaps = 5/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLFVSGAEAQSFLQNLITTDITALGPDEARPGALLTPQGKILFDFMIWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118
+ D +++E D +RD L+ +L YKLR+ V + GV +SW++ E + D
Sbjct: 60 DGDGYMIETDAGQRDGLLKRLTMYKLRAAVTLSPSTEEGVTVSWDEGAEGVRESQGARDS 119
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF+ A V L R G + A + Y LRI+HGIV +DF FPHD LMD G+
Sbjct: 120 RFAKAGVTLTRRAGRHGDGAEVL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFNGGL 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G
Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVEGGNG 237
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ A+ G L V P W
Sbjct: 238 LAIVRIDRAGAAMAAGTPLLAGDTPVSLVLPAW 270
>gi|15888395|ref|NP_354076.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium tumefaciens str. C58]
gi|15156077|gb|AAK86861.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium tumefaciens str. C58]
Length = 282
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 156/271 (57%), Gaps = 5/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MSS +L+++ I+V G A FL +ITAD+ LP R SA+LTPQGKIL FLI +
Sbjct: 1 MSSAFLADRRLIRVSGTGAEEFLNNLITADIENLPEGETRASALLTPQGKILFDFLIWRD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++E +++D+L+ +L YKLR+ V ++ + + G+ + W ++ + + D RF
Sbjct: 61 GRD-YLVETGAAEQDALLRRLTMYKLRAPVELKAETVEGIGVFWG--NSVTEAGVRDGRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A V L R + + Y LR+ HGI + D+ FPHD LMD+ +G+S
Sbjct: 118 AKAGVDLRRV--PGASASGEAAAYEALRVEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQEVVSR++HR R+R + ++ LP SG+ I + +G LG V G +ALA
Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSADGTLPASGTEITANGKPVGALGTVYGNRALA 235
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I R D+V A+ G L V V + P W
Sbjct: 236 IVRTDRVADALAAGTPLLADNVAVSVALPAW 266
>gi|209548616|ref|YP_002280533.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534372|gb|ACI54307.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 284
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 149/273 (54%), Gaps = 5/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118
+ D + +E D +RD L+ +L YKLR+ V + + +GV +SW + E + D
Sbjct: 60 DGDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDS 119
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF+ A V L R G + + Y LRI HGIV DF FPHD LMD G+
Sbjct: 120 RFAKAGVTLIRQPGKHGD--GEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGL 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G
Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHG 237
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ AI G L V P W
Sbjct: 238 LAIVRIDRAGAAIAAGTPLLAGETPVSLVLPQW 270
>gi|163760578|ref|ZP_02167659.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea
phototrophica DFL-43]
gi|162282193|gb|EDQ32483.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea
phototrophica DFL-43]
Length = 272
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 148/261 (56%), Gaps = 5/261 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A FLQ +ITA+V TL + +A+LTPQGKIL FLIS+ E F L+ID
Sbjct: 1 MHVDGAEAEHFLQNLITANVETLKSGCVQAAALLTPQGKILFDFLISRAPEGGFHLDIDG 60
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIADVLLHRT 130
D + +L YKLR+NV + Q V+ W+Q +++ ID RF A V R
Sbjct: 61 KLTDGFMKRLTLYKLRANVSFDRQADTPVIAGWDQPR--PDAALIDNRFPETAGVW--RL 116
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
+G N + + + LRI +G+ + +D+ S FPHD LMD +G+ KGCY+GQEV
Sbjct: 117 YGSNANLGAGQADWDSLRIAYGVAESGSDYALSDAFPHDILMDKNHGVDFRKGCYVGQEV 176
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250
VSR+ HR R+R + ++G LPPSG+ I +G LG V G +ALAI RID+V A
Sbjct: 177 VSRMHHRGTARRRVVTVSGEATLPPSGTSIQAGTKPVGELGTVSGDRALAIVRIDRVADA 236
Query: 251 IKKGMALTVHGVRVKASFPHW 271
+ LT G+ V + P W
Sbjct: 237 MAAEHQLTADGIAVTLTLPDW 257
>gi|116251291|ref|YP_767129.1| aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115255939|emb|CAK07020.1| putative aminomethyltransferase [Rhizobium leguminosarum bv. viciae
3841]
Length = 287
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 147/276 (53%), Gaps = 8/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G FLQ +IT D+ L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLFVSGAETQSFLQNLITTDIAALGADEARPGALLTPQGKILFDFVIWR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-----SF 115
+ + +++E D +RD L+ +L YKLR+ V + GV + W ++ S
Sbjct: 60 DGEGYMIETDAGQRDGLLKRLTMYKLRAAVTLAPSTEEGVTVCWGEDADGSQGVRGSQGA 119
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D RF+ A + L R G + + Y LRI+HGIV +DF FPHD LMD
Sbjct: 120 RDSRFAKAGITLIRRPGKHGDGKEAL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFN 177
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
G+S KGCY+GQEVVSR+QHR R+R + ++ DLP +G+ I +GTLG V G
Sbjct: 178 GGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATDLPGTGTEITAAGKPVGTLGSVDG 237
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ A+ G L V P W
Sbjct: 238 GNGLAIVRIDRAGAAMAAGTPLLAGNTPVSLVLPAW 273
>gi|114707124|ref|ZP_01440022.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506]
gi|114537320|gb|EAU40446.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506]
Length = 284
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 160/274 (58%), Gaps = 10/274 (3%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ +++ G A FLQ ++TA+ TLP +AR SA+LTPQGKIL FL+SK
Sbjct: 1 MPYAQLEDRAVLRLSGSDAGTFLQNLVTAETATLPKGVARPSALLTPQGKILFDFLVSKT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSSFIDER 119
E D + +E + RD+L +L YKLR+ V++E P + V + W T S + DER
Sbjct: 61 E-DGYRIECAAAIRDALAKRLTLYKLRAKVLVE--PADEPVFALWEAGETPSGA-VRDER 116
Query: 120 FSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
F V +R +G + A+D T+ LR+ G+ + TDF + +FPHD L+D G
Sbjct: 117 FGGGPV--YRLYGEPTDAGEAADAATFRTLRLRSGVAEAETDFPQADMFPHDVLLDQNGG 174
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+S KGCY+GQEVVSR+QHR R+R M+ +G L G+ + + + +IGTL +
Sbjct: 175 VSFKKGCYVGQEVVSRMQHRGTARRRLMLASGERHL-TEGANVTSGEAKIGTLLAASERF 233
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+A+ R DK+ +K G AL + GV ++ + P W
Sbjct: 234 GIAVVRTDKLASILKSGAALAIDGVPIELTIPSW 267
>gi|218661628|ref|ZP_03517558.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli IE4771]
Length = 278
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLASDEARPGALLTPQGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------EHTFSN 112
+ D +++E D +RD L+ +L YKLR+ V + + GV + W + E +
Sbjct: 68 DGDGYMIETDAGQRDGLMKRLTMYKLRAAVTLALVAEEGVSVCWGEDEDGIRDAESVRDS 127
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
D RF+ A + L R G + A + Y LRI HGI +DF FPHD L+
Sbjct: 128 RGVRDSRFAKAGIALTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFALQDAFPHDVLL 185
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG
Sbjct: 186 DLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGTGTEITAAGKPVGTLGS 245
Query: 233 VVGKKALAIARIDKVDHAIKKGMAL 257
V G LAI RID+ A+ +G L
Sbjct: 246 VAGGSGLAIVRIDRAGAAMAEGTPL 270
>gi|307300928|ref|ZP_07580697.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
gi|307321831|ref|ZP_07601217.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
gi|306892500|gb|EFN23300.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
gi|306903883|gb|EFN34469.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
Length = 282
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 147/271 (54%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+
Sbjct: 1 MPMVCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF
Sbjct: 60 DGEALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A V + R + + I LRI GI D+ FPHD LMDL G+S
Sbjct: 118 EKAGVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI K A+ VR+ + P W
Sbjct: 238 IVRIDKAGEAIAKSEAILAGDVRLTLTLPAW 268
>gi|15964857|ref|NP_385210.1| hypothetical protein SMc02558 [Sinorhizobium meliloti 1021]
gi|15074036|emb|CAC45683.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021]
Length = 280
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 146/268 (54%), Gaps = 3/268 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ + +
Sbjct: 2 VCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR-DGE 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF A
Sbjct: 61 ALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRFEKA 118
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
V + R + + I LRI GI D+ FPHD LMDL G+S KG
Sbjct: 119 GVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSFRKG 178
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
CY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LAI R
Sbjct: 179 CYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLAIVR 238
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
IDK AI K A+ VR+ + P W
Sbjct: 239 IDKAGEAIAKSEAILAGDVRLTLTLPAW 266
>gi|13476462|ref|NP_108032.1| hypothetical protein mll7789 [Mesorhizobium loti MAFF303099]
gi|14027223|dbj|BAB54177.1| mll7789 [Mesorhizobium loti MAFF303099]
Length = 286
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 148/276 (53%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ TL + A+LTPQGKIL FLIS+
Sbjct: 1 MPFALLKDRALISVSGPDAEHFLQNILTTDLDTLGAGETKPGALLTPQGKILFDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---NSSFID 117
E+ F LE D + +L+ YKLR+ V I + V ++W +E S +++F D
Sbjct: 61 GENAFRLECRADISDDFVRRLMLYKLRAKVEIAKSEQSLVAVAWGKESIASENDSTAFAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+RF+ V RT+ A DI + RI HG+ + D+ FPHD L+D G
Sbjct: 121 KRFAKESVT--RTYAGIAD-AGDIAAWQAFRIAHGMAESGADYALGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEVVSR+QHR R+R +I+ LP G+ + + +GTLG G
Sbjct: 178 VGFKKGCYVGQEVVSRMQHRGTARRRVLIVQAGLALPAPGTELTVEGRPVGTLGSSAGDI 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V V+ + P W K
Sbjct: 238 GLAIARIDRVKVALDAGQPILAGDVPVRLAIPAWAK 273
>gi|222148091|ref|YP_002549048.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
gi|221735079|gb|ACM36042.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
Length = 279
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L N++F+KV G A FL ++TAD+ + A SA+LTPQGKIL L+ +
Sbjct: 1 MPAVFLENRAFLKVAGAEAAHFLNNLLTADLGLIEPGQAAPSALLTPQGKILFDMLVYPL 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D ++LE+ ++++L+ +L YKLR+ V + +GV + W+ T +F D RF
Sbjct: 61 A-DGYLLEVASDEQEALLRRLTLYKLRAAVTLTPAEFSGVTVIWDNVPT---GAFQDRRF 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + R G DI+ Y LRI G+ + D+ +PHD L+DL G+S
Sbjct: 117 AAAGETVWRVPGRVNSAGDDIRLYTALRIKAGVAEAGLDYPLQDAYPHDVLLDLNGGVSF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+ HR + R+R I++ LP +G+ + D +GTLG V+ LA
Sbjct: 177 KKGCYVGQEVVSRMHHRKMARRRIAIVSADTALPATGTELRADGKPLGTLGTVLDTIGLA 236
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ G + V+ P W
Sbjct: 237 ILRIDRTGDAMANGTPILAGDQAVRLHLPAW 267
>gi|227821430|ref|YP_002825400.1| putative aminomethyltransferase protein [Sinorhizobium fredii
NGR234]
gi|227340429|gb|ACP24647.1| putative aminomethyltransferase protein [Sinorhizobium fredii
NGR234]
Length = 282
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ I V GK A LQ ++T D+ L R A+LTPQGKIL FLIS+
Sbjct: 1 MPKLRLDDRVTISVSGKDADALLQGLVTTDIGALADDEVRPGALLTPQGKILFDFLISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE R + ++L+ +L YKLRS V + + VV+++ +E SS+ D RF
Sbjct: 60 DGEALRLETSRDQAEALLKRLTMYKLRSAVELSLLAPAPVVVAFGEER--PESSYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A + + R + + Y LRI G+ D+ FPHD LMDL G+S
Sbjct: 118 EKAGIPVFRLYREIAGAGAGAADYDRLRIEAGVATAGRDYALQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +I++G LPP+G+ + IG+LG V + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRVVIVSGQALLPPTGTSLSIHGRPIGSLGTVQDRAGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI KG + V V + P W
Sbjct: 238 IVRIDKAGEAIAKGDPILAGDVPVTLTLPGW 268
>gi|150395930|ref|YP_001326397.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
gi|150027445|gb|ABR59562.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
Length = 282
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 144/271 (53%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M V L ++ I V GK A LQ +IT D+ L R A+LTPQGKIL FL+S+
Sbjct: 1 MPKVCLDGRAIIHVSGKDADTLLQTLITTDIAQLGADEIRPGALLTPQGKILFDFLLSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE + ++L+ +L YKLRS V I +Q V + + ++ S+ D RF
Sbjct: 60 DGEALRLETTGDQGEALVKRLTMYKLRSAVEISLQSPAPVTVVFGEDA--PAGSYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A V + R + + I + LRI GI D+ FPHD LMDL G+S
Sbjct: 118 EKAGVSVFRLYRDLPSAEAGIADFDALRIAAGIAVAGRDYALQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +II G LPP+G+ I + IG+LG + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIIAGEAALPPTGTSISVNGRTIGSLGTARDRNGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI KG + V V + P W
Sbjct: 238 IVRIDKAGEAIAKGDTILAGDVPVSLTLPAW 268
>gi|110633313|ref|YP_673521.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
sp. BNC1]
gi|110284297|gb|ABG62356.1| glycine cleavage T protein (aminomethyl transferase) [Chelativorans
sp. BNC1]
Length = 288
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 4/276 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M SV LS+++ + G A LQ IIT D+ L AR A+LTPQGKIL FLIS+
Sbjct: 1 MPSVELSDRTVLLAAGPDAEALLQNIITTDLSALGQDEARPGALLTPQGKILFDFLISRT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
+D F L+ + +L+ Y+LR+ + I + +SW + S + S +D
Sbjct: 61 GQDGFRLDCRSDLAQDFLKRLMLYRLRAKAELSIDNNAVISVSWGNDSLSSQTDSMSVVD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF A + + R +G ++ ++DI + LR+ HG+ + D+ FPH+ L D G
Sbjct: 121 RRFPEA-LKVARRYGSADEGSADISAWDRLRVEHGVAESGRDYDLGDAFPHEILFDQNGG 179
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ L KGCY+GQEVVSR+ HR R+R +I+ G LP SGS I D IG LG V
Sbjct: 180 VGLKKGCYVGQEVVSRMHHRGTARRRLVIVRGDKALPASGSQITADGRAIGALGTVCDAD 239
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAI RID+ AI+ G + + P + K
Sbjct: 240 GLAILRIDRAAEAIQAGNPILAGEAALSLKVPAFAK 275
>gi|319784488|ref|YP_004143964.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170376|gb|ADV13914.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 286
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 142/276 (51%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+
Sbjct: 1 MPCAQLKDRALISVSGPDAEHFLQNILTTDLDILAPGEAKPGALLTPQGKILFDFLISRT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
E+ F LE D + +L YKLR+ V I V ++W E T S S + D
Sbjct: 61 GENAFRLECRADISDDFVRRLTLYKLRAKVEITKSDQAFVTVAWGHESTPSQSDSTAAAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF V R++G ++ D+ + RI GI + +D+ FPHD L+D G
Sbjct: 121 TRFPKGAVT--RSYGETDE-PGDLAAWQAFRIVGGIAESGSDYQLGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
I KGCY+GQEVVSR+QHR R+R +I + LP G+ + +GTLG V
Sbjct: 178 IGFKKGCYVGQEVVSRMQHRGTARRRVLIASADRPLPAPGTELTVAGRPVGTLGSTVDTT 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V + + P W K
Sbjct: 238 GLAIARIDRVKAALDAGQPIMAGDVPLTLAIPGWAK 273
>gi|254471836|ref|ZP_05085237.1| glycine cleavage T protein [Pseudovibrio sp. JE062]
gi|211959038|gb|EEA94237.1| glycine cleavage T protein [Pseudovibrio sp. JE062]
Length = 280
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 10/270 (3%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
L+++ +KV G A FLQ +++ DV L + A+LTPQGKIL +F+ + D
Sbjct: 8 LTSRRLVKVFGDDAKEFLQNLVSCDVSELSATSSAFGALLTPQGKILWDFFVFADESTDG 67
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING---VVLSWNQEHTFSNSSFIDERFS 121
F++++ + D+ +L FYKLR+ V +E P + VV W + + D R +
Sbjct: 68 FLIDVSADELDAFAKRLAFYKLRAKVTVE--PADEAVHVVAEWGDD--LPSDKPQDPRLA 123
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
L + G E+ AS+ YH RI GI DF + +FPHD MD LNG++ +
Sbjct: 124 EMG-LRYIVTGEVEETASEAD-YHAHRIGLGIPQSGQDFQLADVFPHDTDMDSLNGVAFS 181
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGC+IGQEVVSR++HR RKR + ++ DLP +GS IL + +G+LG G LA+
Sbjct: 182 KGCFIGQEVVSRMKHRGTARKRVIKVSADSDLPATGSDILAGEKSVGSLGSSAGGAGLAM 241
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
R+D+ A+ G+ L GV + S W
Sbjct: 242 LRLDRAKAAMDAGVPLMCEGVTLSPSIQAW 271
>gi|239831501|ref|ZP_04679830.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301]
gi|239823768|gb|EEQ95336.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301]
Length = 329
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 5/269 (1%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+
Sbjct: 49 TVNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDDLKPGALLIPQGKILFDFLVSRID- 107
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERF 120
++ S I ++ Y+LR+ I QP + V +SW + S I D RF
Sbjct: 108 GGLRFDLPASVAADFIKRITLYRLRAKAEITQQPESLVSVSWQGDSPPSQDDSIKRDSRF 167
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A++ + R +G + +D + +LR HGI + TDF + +FPHD D G+S
Sbjct: 168 P-AELNVRRIYGRADGT-TDQSAWTKLRAEHGIAEGETDFAYNDVFPHDVNFDQTGGVSF 225
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC+IGQEVVSR+QHR R+R ++ LPP G+PI D EIGT+G +A
Sbjct: 226 PKGCFIGQEVVSRMQHRGTARRRVLVARSEVPLPPMGTPITVDGREIGTMGSSADMVGIA 285
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ RID+V A+ G + V + P
Sbjct: 286 LVRIDRVKDAMDAGSTVLAGETPVTLTLP 314
>gi|49474072|ref|YP_032114.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse]
gi|49239576|emb|CAF25933.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse]
Length = 288
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISK 59
+++ + IKV G+ A FLQ++IT DV + P +I G A+L+PQGK+L FLI K
Sbjct: 5 QNAICFKKRKVIKVTGEEATDFLQSLITTDVTKIAPQEIFPG-ALLSPQGKVLADFLIGK 63
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFI 116
++D ++++I S D+L +LLFYKLR V I QP +V +SWN E N SSFI
Sbjct: 64 RDDD-YLIDIVSSLADTLYKRLLFYKLRKKVEIS-QPFQELVTISWNNESNNFNFDSSFI 121
Query: 117 DERFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D+RF + ++ RT+G A D K ++ LRI + I + D+ IFPHD D +
Sbjct: 122 DKRFPQKEKIV-RTYGEIPFSAPDYNKNWNRLRIRYAIAESGQDYEIGKIFPHDINYDQI 180
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
+G+S KGCYIGQE+VSR+ HR+ R+R +I+ +L S S + +G LG
Sbjct: 181 SGLSFNKGCYIGQEIVSRMHHRHTARRRVLIVKSQHEL-TSESTVEAGTKVLGHLGTCAA 239
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ALA+ RID V A+ + TV V S
Sbjct: 240 NEALALMRIDHVKDAMNNNITFTVENTPVTIS 271
>gi|240141126|ref|YP_002965606.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens AM1]
gi|240011103|gb|ACS42329.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens AM1]
Length = 284
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGSDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|328544948|ref|YP_004305057.1| aminomethyltransferase protein (glycine cleavage) [polymorphum
gilvum SL003B-26A1]
gi|326414689|gb|ADZ71752.1| Putative aminomethyltransferase protein (Glycine cleavage)
[Polymorphum gilvum SL003B-26A1]
Length = 295
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 17/281 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+++ ++V G A FLQ +IT D+ A A+LTPQGKIL FLI K + + +
Sbjct: 9 LASRGVVEVGGPEAHHFLQNLITCDMDKAAETGAGYGALLTPQGKILFDFLILK-DGERY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSN--SSFIDERFSI 122
+L+ R+ L+ +L+FY+LR+ V I + + V W + S S+ D R
Sbjct: 68 LLDTPRAAVADLVKRLVFYRLRARVEIADRSEDLAVAALWGTDEAPSGAGSAVRDPRLP- 126
Query: 123 ADVLLHRTWGHNEKIASDIKT----------YHELRINHGIVDPNTDFLPSTIFPHDALM 172
VL R G E +A + + RI G+ + DF FPHDA M
Sbjct: 127 --VLGFRLVGPREGLARTLAAAGAEDAGEAGWQAHRIRLGVPEAGADFALGDAFPHDADM 184
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
D L+G+S KGCY+GQEVVSR++HR+ R+R + ++G LP +G+PI D +GTLG
Sbjct: 185 DQLSGVSFRKGCYVGQEVVSRMEHRSTARRRVVKVSGQQPLPEAGTPITADGRPVGTLGS 244
Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
G LA+ R+DKV A+ G++L V + + P W +
Sbjct: 245 STGGDGLALVRLDKVKAALDNGVSLECGAVPLAVALPEWAR 285
>gi|218532559|ref|YP_002423375.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4]
gi|218524862|gb|ACK85447.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4]
Length = 284
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|304392057|ref|ZP_07373999.1| glycine cleavage T protein [Ahrensia sp. R2A130]
gi|303296286|gb|EFL90644.1| glycine cleavage T protein [Ahrensia sp. R2A130]
Length = 283
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + +N++ G+ A FL+ ++T + P A+LTPQGKIL F I+ I
Sbjct: 13 MSQILHTNRATFSCTGEDATHFLENLVTCLISGKPAF----GALLTPQGKILFDFFITPI 68
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDER 119
+ + + +RD LI +L FYKLR+ V ++ P+ VV SW + T + +F D R
Sbjct: 69 D-GGYRFDCAAEQRDELIKRLGFYKLRAKV--DLAPLEEAVVTSWG-DATRPDDAFDDPR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN--- 176
S L R + + +D + RI G+ + D P ++FPHD MD +
Sbjct: 125 LS---ALGWRAYRMQAEAKADDDAWLAHRIALGVPELGVDAEPGSVFPHDMSMDQFSKGS 181
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
G++ KGCY+GQEVVSR+QHR R R + + +DLP SG+ ++ D IGTLG V G+
Sbjct: 182 GVAFDKGCYVGQEVVSRMQHRGTARSRFVNVAAVNDLPESGAELMVGDRTIGTLGSVSGQ 241
Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LA+ R+D+ AI +G +T G V + P W
Sbjct: 242 HGLALVRLDRAAKAITEGAPITADGTEVMLTLPDW 276
>gi|260462304|ref|ZP_05810512.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075]
gi|259031798|gb|EEW33066.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075]
Length = 286
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+
Sbjct: 1 MPFTLLKDRALISVSGPDAEHFLQNILTTDLDVLGESEAKPGALLTPQGKILFDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---TFSNSSFID 117
E+ LE D + +L+ YKLR+ V I V ++W +E +++ D
Sbjct: 61 GENALRLECRADISDDFVRRLMLYKLRAKVEIAKPEQALVSVAWGKESIALQSDSTAVAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF V R++ A D + RI HGI + D+ FPHD L+D G
Sbjct: 121 RRFGGESVT--RSY-AGAAQADDGAAWQTFRIAHGIAESGADYALGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEVVSR+QHR R+R +I+ LP +G+ + + +G LG G
Sbjct: 178 VGFRKGCYVGQEVVSRMQHRGTARRRVLIVQSELPLPVAGTELTVEGRPVGALGSSAGTT 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V V P W K
Sbjct: 238 GLAIARIDRVKAALDAGRPILAGDVPVTLIIPTWAK 273
>gi|163853701|ref|YP_001641744.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1]
gi|163665306|gb|ABY32673.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1]
Length = 284
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 140/275 (50%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W T + + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWEGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|121602749|ref|YP_988794.1| aminomethyltransferase [Bartonella bacilliformis KC583]
gi|120614926|gb|ABM45527.1| aminomethyltransferase [Bartonella bacilliformis KC583]
Length = 286
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 154/270 (57%), Gaps = 8/270 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKI 60
+++ L N+ I V G+ A FLQ +IT DV + P ++ G A+L+PQGK++ FLI KI
Sbjct: 6 NAISLKNRKIINVIGEEATHFLQMLITTDVTKIGPQELFPG-ALLSPQGKVIADFLIGKI 64
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDE 118
++ ++++I S D+ +LL YKL + + +Q I + L + SFID+
Sbjct: 65 DQG-YMIDIAESLADTFQKRLLLYKLHKKIEVTQPLQTITTIFLENEINTSKFTLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIA-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ RT+G +A D +H +RI + I + D+ T+FPHD D + G
Sbjct: 124 RFPENEKII-RTYGETPFLAPKDNDNWHRMRIRYAITESGQDYEIGTVFPHDINYDQIGG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+S KGCY+GQEVVSR+ HR I R+R +I+TG L P GS I + +G LG + +
Sbjct: 183 LSFNKGCYVGQEVVSRMHHRKIARRRFLIVTGQHYLTP-GSTIEASNKTLGKLGTCIANE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
ALA+ RID V A+ K TV+ + V S
Sbjct: 242 ALALMRIDHVKDAMDKDSQFTVNNLPVTIS 271
>gi|312113562|ref|YP_004011158.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100]
gi|311218691|gb|ADP70059.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100]
Length = 290
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 144/277 (51%), Gaps = 7/277 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S L +++ +KV G + FL +IT DV L AR S +L+PQGKIL F + +
Sbjct: 1 MPSTLLPDRAVLKVTGDDHVSFLHGLITNDVEHLGNDEARFSGLLSPQGKILFDFFVVR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTF-----SNSS 114
DT ++ +++ D+L+ +L YKLR+ V + ++ W ++ +
Sbjct: 60 HGDTHFIDAPKAQADALLKRLTMYKLRAKVDVADVSDKTAAGAIWGEDAAAWAKANGGLA 119
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ D R + + + + + Y RI + + D+ S FPH+A D
Sbjct: 120 YADPRLPELGSRILISAAAAPAVTATPEDYAAHRIALAVPEGGADYAFSDAFPHEACFDF 179
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
L+G+ KGC++GQEVVSR+QHR R R + +T + DLP G+ I+ +G LG V
Sbjct: 180 LHGMDFKKGCFVGQEVVSRMQHRGTARTRVLSVTASADLPEGGADIVAGGFPVGRLGSVY 239
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G +A+ARID+V A+ KG+ALTV V + PHW
Sbjct: 240 GAHGVALARIDRVRDALAKGLALTVGAADVDLTVPHW 276
>gi|188584007|ref|YP_001927452.1| folate-binding protein YgfZ [Methylobacterium populi BJ001]
gi|179347505|gb|ACB82917.1| folate-binding protein YgfZ [Methylobacterium populi BJ001]
Length = 285
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 136/253 (53%), Gaps = 3/253 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLLSRD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
+ F L++ + L+ +L Y+LR+ V + P GV +W+ T +++ + D R
Sbjct: 61 GGNGFRLDVAAERVPDLVKRLGLYRLRAKVTVAADPTLGVAAAWDGSETAADTVRVRDGR 120
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ + G A++ + YH RI G+ + DF S FPH+ALMD L G+
Sbjct: 121 LPALGERLYFSQGAFSADATE-EDYHAHRIGLGVPEGGRDFALSDAFPHEALMDQLGGVD 179
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + I D P+ G+ + +GT G G +
Sbjct: 180 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPAPGTEVTAGARSLGTTGSAAGHRG 239
Query: 239 LAIARIDKVDHAI 251
LA R+D++ A+
Sbjct: 240 LATIRLDRLGDAL 252
>gi|90420870|ref|ZP_01228775.1| putative aminomethyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334845|gb|EAS48617.1| putative aminomethyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 288
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 7/273 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +S + V G++A FLQ ++TAD+ +L R A+LTPQG+IL FLI K
Sbjct: 1 MPYARLPERSLLAVTGEAAHHFLQNLVTADLDSLADGEMRPCALLTPQGRILFEFLIGK- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++ S L +L Y+LR+ + IE + V+ W + + + D RF
Sbjct: 60 QADGLRIDVAASAAADLKKRLTLYRLRTKIGIESSDLP-VLAVWEEPDLTAAELYADRRF 118
Query: 121 SIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ + R +G E I + Y RI GI + TD+ S +FPHD L D G+
Sbjct: 119 PEGE--MARLYGAPPAELIEASPDDYRLRRIRGGIAEAETDYPGSDVFPHDVLFDQNGGV 176
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC++GQEVVSR+QHR R+R M++ G L P GS I IGT+ G +
Sbjct: 177 SFRKGCFVGQEVVSRMQHRGTARRRLMLLAGERHLTP-GSNIEAGGKTIGTVLSADGTEG 235
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
RID++ A+ +G L+ GV V A+ P W
Sbjct: 236 FGFLRIDRLAGALSRGEELSADGVPVTATIPPW 268
>gi|92119419|ref|YP_579148.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
hamburgensis X14]
gi|91802313|gb|ABE64688.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
hamburgensis X14]
Length = 293
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 20/289 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + R A+LTPQGKI FLI++
Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEA 60
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115
+ F+++ S SL KL FYKLR+ V ++ I GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPDLTF 120
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164
D R +D L R E++A+ T Y RI G+ TDF+
Sbjct: 121 ADPR---SDRLGWRILAP-EELATRAATVIGAELVESADYDAHRIAAGVPSGGTDFMFGD 176
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + D P +G+ I+ D
Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVLLDDGAPDAGTAIVAAD 236
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+GT+G + LA+ R+D+ AI+ G+ALT G+ ++ + P K
Sbjct: 237 KSVGTMGSSAASQGLALLRLDRAADAIEAGIALTAGGIPIRVADPDDLK 285
>gi|118589212|ref|ZP_01546618.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia
aggregata IAM 12614]
gi|118437912|gb|EAV44547.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia
aggregata IAM 12614]
Length = 308
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 146/290 (50%), Gaps = 20/290 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S LS++S I+V G A FLQ ++TAD+ + A A+LTPQGKIL FLI ++
Sbjct: 8 LSYAPLSDRSLIRVGGADAQHFLQNLVTADIDGMKDGGASAGALLTPQGKILFDFLIYRL 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDER 119
E ++L+ + L+ +L FY+LR+ V +E+ P N GV+ W+ D
Sbjct: 68 ES-GYLLDAPSATAADLVKRLTFYRLRAKVDLELLPENVGVIALWDDNPEAGKGLDSDVD 126
Query: 120 FSIADVLLHRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTI 165
+++ V R ++IA D+ Y RI+ G+ + D+ S I
Sbjct: 127 GALSAVTDPRLPALGKRIAGPVVELALKLLATAQDLAAYDRHRISMGVPEGLKDYDYSDI 186
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
FPHDA +D L G+S +KGCY+GQEVVSR+ HR RKR + I +D LP G+ I
Sbjct: 187 FPHDADLDQLGGVSFSKGCYVGQEVVSRMHHRGSARKRFVQIESSDALPEKGTDITAGGK 246
Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IG LG G LA+ R+DKV A G L + P W
Sbjct: 247 SIGALGSSALTDDGAVGLALLRLDKVAQAKDNGTPLQCGDAEILVKLPDW 296
>gi|153009949|ref|YP_001371164.1| glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC
49188]
gi|151561837|gb|ABS15335.1| Glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC
49188]
Length = 287
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 5/268 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+
Sbjct: 8 VNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDNLKPGALLAPQGKILFDFLVSRID-G 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-HTFSNSSFI-DERFS 121
++ S I ++ Y+LR+ I P + V +SW E H N S D RF
Sbjct: 67 GLRFDLPASIAADFIKRITLYRLRAKAEITQLPESLVSVSWQTESHPSQNDSIKRDSRFP 126
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
++ +HR +G + +D + +LR +GI + TDF + +FPHD D G+S
Sbjct: 127 T-ELNVHRIYGPADGT-TDESAWTKLRAEYGIAEGETDFAYNDVFPHDVNFDQTGGVSFP 184
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGC+IGQEVVSR+QHR R+R ++ +LPP G+ I D EIGT G +A+
Sbjct: 185 KGCFIGQEVVSRMQHRGTARRRVLVAHSDGNLPPMGTSITVDGREIGTTGSSADTIGIAL 244
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFP 269
RID+ AI G + + + P
Sbjct: 245 VRIDRAKDAIDAGSPILAGETPITLTLP 272
>gi|254501842|ref|ZP_05113993.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222437913|gb|EEE44592.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 296
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 151/279 (54%), Gaps = 12/279 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ I+V G A FLQ ++TAD+ L + SA+LTPQGKIL FLI K + +
Sbjct: 9 LHDRALIRVSGPDAEHFLQNLVTADIDELADPGSTLSALLTPQGKILFDFLIYK-QNSGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSS---FIDERFS 121
+++ + L+ +L FY+LR+ V +E + V + W + + +N + ID R +
Sbjct: 68 LIDAPKETSADLLKRLTFYRLRAKVDLEAAGEDVCVFALWGGDLSDTNGAELVVIDPRLA 127
Query: 122 IADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ G + A+ D++ Y R+ G+ + DF S IFPHDA MD L G+
Sbjct: 128 ALGQRVVGPTGFADASAATVKDLEAYDAHRVALGVPEGLKDFAYSDIFPHDADMDQLGGV 187
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG--VVVGK 236
S KGCY+GQEVVSR+ HR RKR + I LP G+ ++ +D +G LG ++
Sbjct: 188 SFKKGCYVGQEVVSRVHHRGTARKRFIQIEAAGALPEKGTSVIANDKSVGELGSSTMIDG 247
Query: 237 KALAIA--RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+A +A R+DKV AI+ G+ LT V + P W +
Sbjct: 248 QAFGVALLRLDKVHQAIENGVPLTCGDVAITVKLPDWAE 286
>gi|307941575|ref|ZP_07656930.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4]
gi|307775183|gb|EFO34389.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4]
Length = 298
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 151/286 (52%), Gaps = 22/286 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L+ +S ++V G+ FLQ +ITAD+ + + A+LTPQGKIL FLI +
Sbjct: 7 AHLTERSVVRVSGEDVHHFLQNLITADMDKIDAAGSGFGALLTPQGKILFDFLIFA-QNG 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN--SSFIDERF 120
T++L+ I +L FY+LR+ V IE I + V W + + ++D R
Sbjct: 66 TYLLDTPSQTGADFIKRLTFYRLRAKVAIEDISETHSVFAVWGEAKIDCEPAACWLDPRV 125
Query: 121 SIADVLLHRTWGHNEKIASDIKT----------YHELRINHGIVDPNTDFLPSTIFPHDA 170
+ VL R +G + I + +++ Y RI+ G+ + TDF S+IFPHDA
Sbjct: 126 A---VLGQRLYGKADDIKASLESAGATEAGHTAYAAHRISLGVPESLTDFDYSSIFPHDA 182
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
MD LNG+S +KGCY+GQEVVSR+ HR RKR + +T + LP +G+ I++ DI +G L
Sbjct: 183 DMDALNGVSFSKGCYVGQEVVSRVHHRGTARKRFIQVTSDNALPDAGTDIVSGDISVGQL 242
Query: 231 GVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
K +A+ R+DKV + GV V + P W
Sbjct: 243 TSSTQLEDGTSKGIALTRLDKVVANRSDETPFSCGGVAVDLAIPDW 288
>gi|256113206|ref|ZP_05454074.1| aminomethyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265994614|ref|ZP_06107171.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether]
gi|262765727|gb|EEZ11516.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether]
Length = 287
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S TKGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 182 SFTKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|306842068|ref|ZP_07474740.1| folate-binding protein YgfZ [Brucella sp. BO2]
gi|306287818|gb|EFM59241.1| folate-binding protein YgfZ [Brucella sp. BO2]
Length = 287
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGDEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G +
Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVDGREIGAMGSSANQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|306845268|ref|ZP_07477844.1| folate-binding protein YgfZ [Brucella sp. BO1]
gi|306274427|gb|EFM56234.1| folate-binding protein YgfZ [Brucella sp. BO1]
Length = 329
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 49 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 107
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 108 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQSDSPASDNDSIKRDS 165
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 166 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 223
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G
Sbjct: 224 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDAPLPPMGTPITVDGREIGAMGSSANHIG 283
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 284 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 314
>gi|306837527|ref|ZP_07470402.1| folate-binding protein YgfZ [Brucella sp. NF 2653]
gi|306407419|gb|EFM63623.1| folate-binding protein YgfZ [Brucella sp. NF 2653]
Length = 286
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 6 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 64
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 65 GGLRFDLPADAAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 122
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 123 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 180
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G
Sbjct: 181 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIG 240
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 241 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 271
>gi|254718807|ref|ZP_05180618.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
gi|265983789|ref|ZP_06096524.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
gi|264662381|gb|EEZ32642.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
Length = 287
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADAAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G
Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|225627165|ref|ZP_03785203.1| folate-binding protein YgfZ [Brucella ceti str. Cudo]
gi|261315117|ref|ZP_05954314.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
gi|225618000|gb|EEH15044.1| folate-binding protein YgfZ [Brucella ceti str. Cudo]
gi|261304143|gb|EEY07640.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
Length = 316
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 36 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 94
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 95 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 152
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 153 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 210
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 211 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 270
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 271 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 301
>gi|189023880|ref|YP_001934648.1| glycine cleavage T protein (aminomethyl transferase) [Brucella
abortus S19]
gi|189019452|gb|ACD72174.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
abortus S19]
Length = 286
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 6 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 64
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 65 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 122
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 123 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 180
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 181 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 240
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 241 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 271
>gi|90425803|ref|YP_534173.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB18]
gi|90107817|gb|ABD89854.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB18]
Length = 293
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 143/277 (51%), Gaps = 12/277 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+N+ +K+ G+ A FL ++T D+ L R A+LTPQGKI+ F ++++
Sbjct: 1 MKSAFLANRGVVKISGEDARHFLNGLVTTDMTKLTPSQGRFGALLTPQGKIVADFFVTEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115
++ F+L+ R L DKL FYKLR+ V++E + GV+ W+ E T + F
Sbjct: 61 PAADDGGFLLDCPRELAQPLADKLKFYKLRAKVLVENLSDRLGVLAIWDGELTTLPEACF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + L ++T D Y RI+ G DF FPH
Sbjct: 121 ADPRDPKLGWRCLLPVELANKTAEWIGAPLVDAVLYDARRISCGAPAGGVDFRYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCY+GQEVVSR+QHR R R + + P GS +L D +G
Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMQHRGTARTRTVRLGFDGAQPEPGSELLAADKPVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
LG + LA+ RID++ A++ AL+ GV V+
Sbjct: 241 HLGSLADGVGLALVRIDRLAEAVEAASALSAGGVAVR 277
>gi|23501554|ref|NP_697681.1| aminomethyltransferase [Brucella suis 1330]
gi|62289627|ref|YP_221420.1| aminomethyltransferase [Brucella abortus bv. 1 str. 9-941]
gi|82699555|ref|YP_414129.1| glycine cleavage T protein (aminomethyl transferase) [Brucella
melitensis biovar Abortus 2308]
gi|148560194|ref|YP_001258651.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840]
gi|161618637|ref|YP_001592524.1| glycine cleavage T-protein barrel [Brucella canis ATCC 23365]
gi|254688942|ref|ZP_05152196.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|254693424|ref|ZP_05155252.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|254697077|ref|ZP_05158905.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|254701454|ref|ZP_05163282.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|254704000|ref|ZP_05165828.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|254707626|ref|ZP_05169454.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
gi|254709792|ref|ZP_05171603.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|254713794|ref|ZP_05175605.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|254717149|ref|ZP_05178960.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|254729973|ref|ZP_05188551.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|256031282|ref|ZP_05444896.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M292/94/1]
gi|256060794|ref|ZP_05450956.1| glycine cleavage T-protein barrel [Brucella neotomae 5K33]
gi|256257190|ref|ZP_05462726.1| glycine cleavage T-protein barrel [Brucella abortus bv. 9 str. C68]
gi|256369104|ref|YP_003106612.1| aminomethyltransferase, putative [Brucella microti CCM 4915]
gi|260168420|ref|ZP_05755231.1| aminomethyltransferase, putative [Brucella sp. F5/99]
gi|260545618|ref|ZP_05821359.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260566753|ref|ZP_05837223.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260754429|ref|ZP_05866777.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|260757648|ref|ZP_05869996.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|260761475|ref|ZP_05873818.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|260883457|ref|ZP_05895071.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68]
gi|261213675|ref|ZP_05927956.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|261218964|ref|ZP_05933245.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|261317327|ref|ZP_05956524.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|261321537|ref|ZP_05960734.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|261324785|ref|ZP_05963982.1| glycine cleavage T-protein [Brucella neotomae 5K33]
gi|261751994|ref|ZP_05995703.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|261754653|ref|ZP_05998362.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|261757881|ref|ZP_06001590.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|265988365|ref|ZP_06100922.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1]
gi|294852030|ref|ZP_06792703.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026]
gi|297248038|ref|ZP_06931756.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str.
B3196]
gi|23347465|gb|AAN29596.1| aminomethyltransferase, putative [Brucella suis 1330]
gi|62195759|gb|AAX74059.1| aminomethyltransferase, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615656|emb|CAJ10643.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
melitensis biovar Abortus 2308]
gi|148371451|gb|ABQ61430.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840]
gi|161335448|gb|ABX61753.1| Glycine cleavage T-protein barrel [Brucella canis ATCC 23365]
gi|255999264|gb|ACU47663.1| aminomethyltransferase, putative [Brucella microti CCM 4915]
gi|260097025|gb|EEW80900.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260156271|gb|EEW91351.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260667966|gb|EEX54906.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|260671907|gb|EEX58728.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|260674537|gb|EEX61358.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|260872985|gb|EEX80054.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68]
gi|260915282|gb|EEX82143.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|260924053|gb|EEX90621.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|261294227|gb|EEX97723.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|261296550|gb|EEY00047.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|261300765|gb|EEY04262.1| glycine cleavage T-protein [Brucella neotomae 5K33]
gi|261737865|gb|EEY25861.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|261741747|gb|EEY29673.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|261744406|gb|EEY32332.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|264660562|gb|EEZ30823.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1]
gi|294820619|gb|EFG37618.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026]
gi|297175207|gb|EFH34554.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str.
B3196]
Length = 287
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|163842938|ref|YP_001627342.1| glycine cleavage T-protein barrel [Brucella suis ATCC 23445]
gi|163673661|gb|ABY37772.1| Glycine cleavage T-protein barrel [Brucella suis ATCC 23445]
Length = 287
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEVDFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTARRRVLIARSDVTLPPMGTPITVEGREIGAMGSSASQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|17987565|ref|NP_540199.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|256044363|ref|ZP_05447267.1| aminomethyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|260563715|ref|ZP_05834201.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|265990778|ref|ZP_06103335.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str.
Rev.1]
gi|17983269|gb|AAL52463.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260153731|gb|EEW88823.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|263001562|gb|EEZ14137.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str.
Rev.1]
Length = 287
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 182 SFPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|225852188|ref|YP_002732421.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457]
gi|256264302|ref|ZP_05466834.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|225640553|gb|ACO00467.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457]
gi|263094575|gb|EEZ18373.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|326408688|gb|ADZ65753.1| folate-binding protein YgfZ [Brucella melitensis M28]
gi|326538413|gb|ADZ86628.1| folate-binding protein YgfZ [Brucella melitensis M5-90]
Length = 287
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 146/270 (54%), Gaps = 9/270 (3%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE 62
V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 8 VNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIEG 66
Query: 63 D-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
F L D + + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 67 GLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F A + + R + H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFP 269
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|158422025|ref|YP_001523317.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571]
gi|158328914|dbj|BAF86399.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59
M+ +L ++ + V G A FL ++T ++ +L AR A+L PQGKI+ FLI
Sbjct: 1 MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP 60
Query: 60 -IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFID 117
+T +L++ ++ + L+ + Y+LR+NV E Q + +V W E +F D
Sbjct: 61 VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD 120
Query: 118 ERF---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
R V+L T E + D Y RI GI + DFL FPH+A MD
Sbjct: 121 PRLDELGTRAVVLRAT---AEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQ 177
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLPPSGSPILTDDIEIGTLGV 232
L G+ KGCYIGQEVVSR QHR I R R + ++ G P SG+ I + +G +G
Sbjct: 178 LGGVDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGA---PESGTEIKAGEKTVGRIGS 234
Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ G + +A+ R+D+ A G+ L V V P W
Sbjct: 235 IAGGQGIALVRLDRAAEAKASGLPLLAGDVEVTLKAPDW 273
>gi|319898698|ref|YP_004158791.1| aminomethyltransferase [Bartonella clarridgeiae 73]
gi|319402662|emb|CBI76208.1| aminomethyltransferase [Bartonella clarridgeiae 73]
Length = 288
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 6/266 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQAIIT DV + + A+L+PQGK++ FLISKI+
Sbjct: 6 NAINLKNRKIIKVTGEEATHFLQAIITTDVKKINSRELFPGALLSPQGKVIADFLISKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
++ ++++I S D+ +L+ YKLR V I + + W E N SSF D+R
Sbjct: 66 QN-YMIDIAASLADAFHKRLILYKLRKKVEITKPSQEIINVFWQNESDNLNFDSSFTDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G + + + +RI++GI + + D+ +FPHD D ++G+
Sbjct: 125 FPKKEKVV-RIYGKIPFLTPECNAHWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCYIGQEV+SR+ HR IR+R +++ L SGS + + LG V +A
Sbjct: 184 FFNKGCYIGQEVISRMHHRRTIRRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCVKNEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRV 264
LA+ RID V A+ K TV V V
Sbjct: 243 LALMRIDHVKEAMDKNFQFTVDNVPV 268
>gi|254563637|ref|YP_003070732.1| glycine cleavage T protein [Methylobacterium extorquens DM4]
gi|254270915|emb|CAX26920.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens DM4]
Length = 284
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDAAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + I D P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGFTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHG---VRVKASFPHW 271
LA R+D++ A+ G + G K F H+
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPDFAHF 274
>gi|148253866|ref|YP_001238451.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. BTAi1]
gi|146406039|gb|ABQ34545.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. BTAi1]
Length = 294
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 13/280 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ ++V G A FL + T DV L AR A+LTPQGKI++ FL++++
Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLFTTDVSKLHPGEARFGALLTPQGKIIVDFLVTQV 60
Query: 61 EE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSS 114
+ F+L++ R+ +L DKL YKLR+ V + + GV+ W+ S
Sbjct: 61 PASNGGERFLLDVPRALAQALTDKLNVYKLRAKVAVSNLSDQLGVIAVWDGAVGATPEPS 120
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFP 167
F D R + + G + IA + Y RI+ + DF+ FP
Sbjct: 121 FTDPRHESLGARVIASQGALQDIAGGLGAEVVTADAYEAHRIDCAVPRGGLDFMYGDAFP 180
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
H+ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + +
Sbjct: 181 HETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGEKSV 240
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
GT+G +K +A+ RID+ A++ G LT G+ ++ +
Sbjct: 241 GTMGSASQQKGMALLRIDRATEAMEAGTPLTAGGLTLRVA 280
>gi|256159392|ref|ZP_05457174.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
gi|256254690|ref|ZP_05460226.1| glycine cleavage T-protein barrel [Brucella ceti B1/94]
gi|261221868|ref|ZP_05936149.1| glycine cleavage T-protein [Brucella ceti B1/94]
gi|265997832|ref|ZP_06110389.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
gi|260920452|gb|EEX87105.1| glycine cleavage T-protein [Brucella ceti B1/94]
gi|262552300|gb|EEZ08290.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
Length = 287
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L P+++ G A+LTPQGKIL FL+S+IE
Sbjct: 7 TVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPG-ALLTPQGKILFDFLVSRIE 65
Query: 62 ED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
F L D + + ++ Y+LR+ I P + V + W + S++ I D
Sbjct: 66 GGLRFDLPADVAG--DFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDS 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF A + + R + H + + + +LR +GI + DF +FPHD D G+
Sbjct: 124 RFP-AQLNVLRLY-HQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGV 181
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGC+IG EVVSR+QHR R+R +I LPP G+PI + EIG +G +
Sbjct: 182 SFPKGCFIGHEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIG 241
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ RID+V A+ G ++ + S P
Sbjct: 242 LALVRIDRVKDAMDTGNSILAGDAAITLSLP 272
>gi|319405464|emb|CBI79083.1| Aminomethyltransferase [Bartonella sp. AR 15-3]
Length = 288
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 153/270 (56%), Gaps = 8/270 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATHFLQALITTDVTKINSQELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQE--HTFSNSSFIDE 118
++ ++++I S D+ +L+ YKL + I QP+ ++ + W E N SFID+
Sbjct: 66 QN-YMIDITASLADAFHKRLILYKLHKKIEI-TQPLQEIINVFWQNELDSLNFNLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHE-LRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ RT+G + + Y + +RI++GI + + D+ +FPHD D ++G
Sbjct: 124 RFPEKEKVV-RTYGKTPFLIPEYNIYWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCYIGQEV+SRI HR R+R +++ L SGS + + LG +
Sbjct: 183 LFFNKGCYIGQEVISRIHHRRTARRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCAKNE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
ALA+ RID V A++K + TV + V S
Sbjct: 242 ALALMRIDHVKEAMEKNLQFTVDDIPVTIS 271
>gi|146339093|ref|YP_001204141.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. ORS278]
gi|146191899|emb|CAL75904.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. ORS278]
Length = 294
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ ++V G A FL ++T DV L AR A+LTPQGKI++ FL+++
Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLVTTDVTKLVPGDARFGALLTPQGKIIIDFLVAQA 60
Query: 61 EE----DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWN-QEHTFSNSS 114
+ F+L+ R+ +L DKL YKLR+ + + + GV+ WN T + S
Sbjct: 61 PTGDAGERFLLDCPRALAQALADKLNLYKLRAKLTVANLSDQLGVIAVWNGTPATALDLS 120
Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164
F D R D L HR ++A Y RI + DF+
Sbjct: 121 FTDPRH---DGLGHRIIAPQTELAEIATRLGAEVVTADAYEAHRIECTVPRGGLDFMYGD 177
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
FP++ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL +
Sbjct: 178 AFPYETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGE 237
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+GT+G +K LA+ RID+ A++ G LT G+ ++ + P
Sbjct: 238 KTVGTMGSAAAQKGLALLRIDRAAEAMEAGTPLTAGGLTLRIADP 282
>gi|27377665|ref|NP_769194.1| glycine cleavage system T protein, aminomethyltransferase
[Bradyrhizobium japonicum USDA 110]
gi|27350810|dbj|BAC47819.1| glycine cleavage system T protein, aminomethyltransferase
[Bradyrhizobium japonicum USDA 110]
Length = 293
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 28/290 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L ++ +KV G+ A FL ++T D+ L + R A+LTPQGKI++ FLI+++
Sbjct: 1 MKSAFLPDRGVVKVAGEDARNFLNGLVTTDLDRLKPGLGRFGALLTPQGKIIVDFLITEV 60
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115
F+++ ++ + L KL FYKLR+ +E + GV+ +W+ + +F
Sbjct: 61 PAGHGGGFLIDCPKALAEGLATKLKFYKLRAKATVENLSDDLGVLAAWDGALAAQPDLAF 120
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK---------------TYHELRINHGIVDPNTDF 160
D R H G I D+K Y RI G+ DF
Sbjct: 121 ADPR--------HDGLGTRILIPEDLKQKLSDLIGAELVDAAAYEAHRIALGVPRGGLDF 172
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+ S FPH+ MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ I
Sbjct: 173 MYSDAFPHETNMDRLAGVDFDKGCYVGQEVVSRMQHRGTARTRSVKVLLDGPSPEIGAAI 232
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
L D +GT+G K +A+ RID+V A+ G LT G+ + + P
Sbjct: 233 LAGDKPVGTIGSSADGKGIALVRIDRVADALDAGQPLTAGGLALTLAEPE 282
>gi|75676888|ref|YP_319309.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
winogradskyi Nb-255]
gi|74421758|gb|ABA05957.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
winogradskyi Nb-255]
Length = 293
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 20/289 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI + FLI++
Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKITVDFLITEA 60
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
+ F+++ L KL FYKLR+ V +E + GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLPLAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164
D R +D L R+ E++A+ T Y RI G+ DF
Sbjct: 121 ADPR---SDRLGWRSL-VPEELAARAATVIGAELVESADYEAHRIRAGVPSGGADFNFGD 176
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ +
Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARNRIVRVHLDGGAPEPGTAVVAGE 236
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+GT+G + LA+ R+D+ AI+ G+ LT GV ++ + P K
Sbjct: 237 KPVGTMGSSAADQGLALLRLDRAADAIEAGIPLTAGGVPIRVAEPDELK 285
>gi|209886048|ref|YP_002289905.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5]
gi|209874244|gb|ACI94040.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5]
Length = 313
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 13/273 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +LS++ IKV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I
Sbjct: 23 MKSAFLSDRGVIKVGGEDARHFLNGLVTTNIELVRPGLGRFGALLTPQGKIIADFLVTEI 82
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWN-QEHTFSNSSF 115
F+L+ +S L +L YKLR+ V+IE + GV+ W+ Q + +F
Sbjct: 83 PAGHGGGFLLDCPKSLAQPLTARLSIYKLRAKVVIENLSDSLGVLAVWDGQPQMTPDLAF 142
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + + L + + Y RI G DF + FPH
Sbjct: 143 ADPRDNELGWRILVPAELAEKAAAAIGATMTSEADYEAHRIACGAPRGGVDFGYNDAFPH 202
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
DA MD L+G+ KGCYIGQEVVSR+QHR R R ++ G D SG+ ++ + +G
Sbjct: 203 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARNR-IVRVGIDGDVASGTTVMAGEKTVG 261
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
T G G LA+ R+D+V+ AI+ G+A+T G
Sbjct: 262 TFGSSAGGHGLALLRVDRVNDAIESGLAVTAEG 294
>gi|316932611|ref|YP_004107593.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1]
gi|315600325|gb|ADU42860.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1]
Length = 293
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +LS++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MQAAFLSDRGVLKISGPDARHLLNGLVTTDLTKLAPGAGRFGALLTPQGKIVADFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E F
Sbjct: 61 PAEDDGGFLLDCPKPLTEALATKLKFYKLRAKVLIENLSDRLGVLALWGGEPPQPPEMGF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T + Y RI G+ DF + FPH
Sbjct: 121 RDPRGEQLGWRILVPEILATATAEALGATMATASAYEAHRIGCGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLHGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGAAPQPGSEITAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
T+G + LA+ RID+V A + + L+ GV
Sbjct: 241 TMGSSASGRGLALLRIDRVAEAREASVPLSAGGV 274
>gi|299134703|ref|ZP_07027895.1| folate-binding protein YgfZ [Afipia sp. 1NLS2]
gi|298590513|gb|EFI50716.1| folate-binding protein YgfZ [Afipia sp. 1NLS2]
Length = 291
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 141/273 (51%), Gaps = 13/273 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+++ +KV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I
Sbjct: 1 MKSAFLTDRGVVKVGGEDARHFLNGLVTTNIDLVRPGLGRFGALLTPQGKIIADFLVTEI 60
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFS-NSSF 115
F+L+ +S L +L YKLR+ V IE + GV+ W E + + +F
Sbjct: 61 PAGHGGGFLLDCPKSLAQPLAARLSIYKLRAKVAIENLSDAFGVLALWGGEPQMTPDLAF 120
Query: 116 IDERFSIAD--VLLHRTWGHNEKIA-----SDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R VLL + + A D Y RI G DF + FPH
Sbjct: 121 ADPRDESLGWRVLLPQEFAGKATTAIGAQMVDETEYEAHRIACGAPRGGIDFAYNDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
DA MD L+G+ KGCYIGQEVVSR+QHR R R ++ G D +G+P+ + +G
Sbjct: 181 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARTR-IVRVGLGDAIAAGTPVTAGEKTLG 239
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
T G G + LA+ RID+V A++ G + G
Sbjct: 240 TFGSSAGDRGLALLRIDRVADAVEAGTPVLADG 272
>gi|323135653|ref|ZP_08070736.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242]
gi|322398744|gb|EFY01263.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242]
Length = 273
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 136/274 (49%), Gaps = 24/274 (8%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L+++ I+V G A FL ++T D+ +L AR +A+LTPQGKIL FL+
Sbjct: 3 TAILLADRGVIEVAGADAGKFLHNLVTNDIASLERGEARFAALLTPQGKILFDFLVFATG 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117
E ++L+ S L +L YKLRS + +E N+ +F D
Sbjct: 63 EGRYLLDCPLSLAADLEKRLNMYKLRSKLTVE-----------NRSAELEAGAFPDATEA 111
Query: 118 ---ERFSIAD----VLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPH 168
E ++A L R KI + + Y RI G+ DF + FPH
Sbjct: 112 PKVEALALASDPRAALGWRAIAEKGKIVALGERGEYDARRIRAGVPLGGVDFTYNDAFPH 171
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MDLL G+ KGCY+GQEVVSR++HR ++RKR D P G I +IEIG
Sbjct: 172 EADMDLLAGLDFKKGCYVGQEVVSRMKHRGLVRKRVTPYRAKGDAPAPGETIRAGEIEIG 231
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
G G + LA+ R+D++ A +KG A GV
Sbjct: 232 VTGSRAGDEGLALIRLDRLADAKEKGDAPMAGGV 265
>gi|319407037|emb|CBI80674.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 288
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 153/273 (56%), Gaps = 8/273 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKIKSRELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQ--EHTFSNSSFIDE 118
++ ++++I S D +L Y+L + I I+P+ V+ + WN ++ N SFID+
Sbjct: 66 QN-YMIDIVASLADVFHKRLALYRLHKKIEI-IEPLQEVINVFWNNSLDNLNFNLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G
Sbjct: 124 RFPEKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCYIGQEV+SR+ HR R+R +++ L SGS + LG V +
Sbjct: 183 LFFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTVKAGTKIFSQLGTCVKNE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
ALA+ RID V AI K + TV + V + P
Sbjct: 242 ALALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274
>gi|240850203|ref|YP_002971596.1| aminomethyltransferase [Bartonella grahamii as4aup]
gi|240267326|gb|ACS50914.1| aminomethyltransferase [Bartonella grahamii as4aup]
Length = 290
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 154/267 (57%), Gaps = 8/267 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K +
Sbjct: 6 NAICLKNRGLIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGK-K 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFIDE 118
E+ ++++I D+L +LL YKLR V I QP+ +V +S N E N SSFID+
Sbjct: 65 ENGYLIDIRMPLADTLHQRLLLYKLRKKVEI-TQPLQELVTVSLNNESDALNFDSSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ R +G + S+ T+++LRI + I + D+ +FPHD D +NG
Sbjct: 124 RFPQKEKII-RIYGKKPFLTSEYHDTWNQLRIRYAIAESGQDYEVGKVFPHDINYDQING 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
IS KGCYIGQE+VSR+ HR R+R I+ G +L P S I +G LG V +
Sbjct: 183 ISFNKGCYIGQEIVSRMHHRRAARRRIFIVKGQCELTPQSS-IEAGTKVLGYLGTCVENE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264
ALA+ RID V ++ + TV + V
Sbjct: 242 ALALMRIDHVKDSMDHNIPFTVKNIPV 268
>gi|86748242|ref|YP_484738.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris HaA2]
gi|86571270|gb|ABD05827.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris HaA2]
Length = 293
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ F I++I
Sbjct: 1 MKAALLPDRGVIKISGADARHLLNGLVTTDLTLLEPGLGRFGALLTPQGKIVADFFITEI 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ ++ + L KL FYKLR+ V+IE + GV+ W+ +++ +F
Sbjct: 61 AAEDDGGFLLDCPKTLAEPLTTKLKFYKLRAKVLIENLSDRLGVLAVWDGAPAATSAPAF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTI 165
D R + ++L H+T E I + D Y RI G DF
Sbjct: 121 TDPRNDQLGWRIIVPELLAHKT---AEAIGAELVDAAAYEAHRIACGAPAGGVDFAYGDA 177
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
FPH+A MD L+G+ KGCYIGQEVVSR+ HR R R + + P GS I D
Sbjct: 178 FPHEANMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLIDGAAPQPGSEITAGDK 237
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+GT+G LA+ RID+V A + + L G+ ++ P K
Sbjct: 238 SVGTMGSSADGCGLALLRIDRVADAREASLPLGAAGIALRLVDPDELK 285
>gi|91975718|ref|YP_568377.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB5]
gi|91682174|gb|ABE38476.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB5]
Length = 293
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 12/285 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59
M + +L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ FLI++
Sbjct: 1 MKAAFLPDRGVIKISGADARHLLNGLVTTDLTLLKPGLGRFGALLTPQGKIVADFLITEG 60
Query: 60 --IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ------EHTF 110
++ F+++ ++ L DKL FYKLR+ V+IE + GV+ +W E F
Sbjct: 61 AAADDGGFLIDCPKALAQPLADKLKFYKLRAKVLIENLSDRLGVLAAWGGAPAETPELAF 120
Query: 111 SNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++ D + I ++L +T D+ Y RI G DF FPH
Sbjct: 121 ADPRHDDLGWRIITPELLAQKTAAAIGAELVDVAAYEAHRIACGAPAGGVDFAYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ MD L+G+ KGCYIGQEVVSR+ HR R R + + P +G+ I+ + +G
Sbjct: 181 ESNMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLLDGAGPEAGAEIIAGEKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
T+G V LA+ RID+V A + ++ G+ ++ + P K
Sbjct: 241 TMGSSVDGHGLALLRIDRVADARDASLPISAGGITLRLADPDELK 285
>gi|115526383|ref|YP_783294.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisA53]
gi|115520330|gb|ABJ08314.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisA53]
Length = 293
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 140/271 (51%), Gaps = 12/271 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ IK+ G+ A FL ++T D+ R A+LTPQGKI+ FL++++
Sbjct: 1 MKAAFLADRGVIKISGEEARHFLNGLVTTDMTKAEPGQGRFGALLTPQGKIVADFLLTEL 60
Query: 61 -EEDT--FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
ED F+++ DR+ L KL FYKLR+ V++E + GV+ W+ E + SF
Sbjct: 61 LAEDGGGFLIDCDRALAQPLATKLNFYKLRAKVLVENLSDRLGVLAIWDGEPSPPPEWSF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + + L +T D Y RI G DF FPH
Sbjct: 121 ADPRDASLGWRAPVPVELAAKTAAAIGAEWVDASDYDSHRIACGAPAGGVDFRYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+GI +KGCY+GQEVVSR+ HR R R + I P SGS + +D IG
Sbjct: 181 EANMDKLHGIDFSKGCYVGQEVVSRMHHRGTARTRTVRIAFDGAAPMSGSDMFANDKPIG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
LG + + LA+ RIDK+ A+ G L V
Sbjct: 241 HLGSITNGQGLALVRIDKLADAVDAGERLHV 271
>gi|192289666|ref|YP_001990271.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1]
gi|192283415|gb|ACE99795.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1]
Length = 293
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F
Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T Y RI G+ DF + FPH
Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
T+G + LA+ RID+V A + + L+ GV
Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGV 274
>gi|296446345|ref|ZP_06888290.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b]
gi|296256118|gb|EFH03200.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b]
Length = 280
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 144/288 (50%), Gaps = 30/288 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI-SKI 60
S+ LS++ ++V G A FL I+T DV +L AR +A+LTPQGKI+ F+I +K
Sbjct: 3 SATLLSDRGVVEVAGPDAAKFLHGILTNDVNSLAAGEARFAALLTPQGKIITDFMIFAKA 62
Query: 61 EED--TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117
ED F+L+ + +++L+D+L FYKLR+ V + ++ F++ +F +
Sbjct: 63 AEDGLVFLLDCPAALKETLLDRLKFYKLRAAVTLT-----------DRSGEFASVAFPEA 111
Query: 118 -ERFSIADVLLHR-----TWGHNEKIASDIKT---------YHELRINHGIVDPNTDFLP 162
E+ I + L T G +A + Y RI D DF
Sbjct: 112 AEKPEIDAIALAADPRAPTLGWRGLVAKALAVTVATAPRALYDAKRIAAAAPDGGIDFDY 171
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
FPH+A MD L G+ KGC++GQEVVSR++HR +RKR P G+P+
Sbjct: 172 GDAFPHEANMDRLAGVDFKKGCFLGQEVVSRMKHRGPVRKRVTTFHAQGPAPAPGTPVKA 231
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
++EIG G VG + LA+ R+D++ A G G+ + S P
Sbjct: 232 GEVEIGVTGSAVGGEGLALIRLDRLADAKSGGAVPLAGGIALDFSVPE 279
>gi|39934143|ref|NP_946419.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris CGA009]
gi|39647991|emb|CAE26511.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris CGA009]
Length = 293
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F
Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T Y RI G+ DF + FPH
Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEINAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
T+G + LA+ RID+V A + + L+ GV + + P
Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLAIADP 281
>gi|85714363|ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
sp. Nb-311A]
gi|85698810|gb|EAQ36679.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
sp. Nb-311A]
Length = 293
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 20/285 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI+ FLI++
Sbjct: 1 MKAAFLPDRGVVKVIGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKIIFDFLITEA 60
Query: 61 EED---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
+ F+++ + L KL FYKLR+ V +E + GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLALAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPST 164
D R +D L R E++A T Y RI GI DF
Sbjct: 121 ADPR---SDKLGWRILA-PEELAGRAATVIGAELVESADYEAHRIAAGIPSGGNDFKFGD 176
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
FPH+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ +
Sbjct: 177 AFPHEANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVRLDAGAPEPGTAVVAGE 236
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+GT+G + LA+ R+D+ AI+ G+ LT + + + P
Sbjct: 237 KAVGTMGSSAADQGLALLRLDRAADAIEAGIPLTAGDIPIHVAEP 281
>gi|329888212|ref|ZP_08266810.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
gi|328846768|gb|EGF96330.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
Length = 262
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 136/272 (50%), Gaps = 15/272 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS L +++ I+V G A PFL ++T DV TL R A+L+P G++L I
Sbjct: 1 MSIARLDSRALIRVSGPDARPFLHNLLTQDVETLQPGELRFGALLSPPGRLLFDLFIWG- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-NGVVLSWNQEHTFSNSSFIDER 119
EED +L++ +RD+L+ +L YKLR+ V E+ PI + V ++W + D R
Sbjct: 60 EEDGVVLDVAAERRDALVQRLSLYKLRAQV--EVMPIPDAVFVAWGVD--VPEGFVADPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L R WG + + + R+ G+ DP D L +P +A DLLNGI
Sbjct: 116 LP---GLGGRRWGDQSETDAVEADWQAHRLTLGVPDPTQDALMDKTYPIEADFDLLNGID 172
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQE SR++ R I+ R M IT P G +L ++ G + +A+
Sbjct: 173 FHKGCFIGQETTSRMKRRGTIKNRMMAITFEGPAPERGVEVLKGELRAGEVMTGAEGRAI 232
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
A+ R+D++D LTV G V+ P W
Sbjct: 233 ALMRLDRMDG------DLTVEGRPVRVEKPDW 258
>gi|319404024|emb|CBI77612.1| Aminomethyltransferase [Bartonella rochalimae ATCC BAA-1498]
Length = 288
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKINSRELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119
++ ++++I S D +L YKL + I +Q + V + + ++ N SF+D+R
Sbjct: 66 QN-YMIDIVASLADVFHKRLTLYKLHKKIEITEPLQEVINVFWNNDLDNLNFNLSFVDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G+
Sbjct: 125 FPKKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCYIGQEV+SR+ HR R+R +++ L SGS I LG V +A
Sbjct: 184 FFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTIKAGTKIFSQLGTCVKNEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V AI K + TV + V + P
Sbjct: 243 LALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274
>gi|220920725|ref|YP_002496026.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060]
gi|219945331|gb|ACL55723.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060]
Length = 276
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 138/273 (50%), Gaps = 8/273 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L++++ + + G A FLQ +IT +V TLP AR A+L PQGKIL FL+S+
Sbjct: 1 MPIASLTDRAVLALTGDDAPGFLQGLITCNVETLPPDEARLGALLAPQGKILFDFLLSRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D F L+ R+ L+ +L Y+LR+ V P+ V +W E S D R
Sbjct: 61 G-DGFHLDAPRAVLPDLMRRLTLYRLRARVAFAQTPLR-VFAAWGAEP--EGSWLRDGRL 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L+ G + + + + RI G+ + DF FPH+ALMD L G+
Sbjct: 117 PALGWRLYAPEGGEPAVDATPEAFQAHRIALGVPESGADFALGDAFPHEALMDQLGGVDF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R P++ G P+G+P+ +G G G +
Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPLLYPGAAV--PAGTPVTAGARALGQTGSAAGDRG 234
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
L + R+D++ A+ G + G+ V+ + P +
Sbjct: 235 LGLLRLDRLADAVAAGERVEAGGLSVRVAKPDF 267
>gi|49475310|ref|YP_033351.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1]
gi|49238116|emb|CAF27323.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1]
Length = 285
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 8/270 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK+L FLI K
Sbjct: 6 NAICLKNRKIIKVTGEEATHFLQALITTDVKKIGLQEIFPGALLSPQGKVLADFLIGK-R 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSN--SSFIDE 118
ED + ++I S D L +LL YK+R+ V I +QP+ V +SW E N SSFID+
Sbjct: 65 EDGYFIDIFSSLSDLLYKRLLLYKMRTKVEI-MQPLQEFVTVSWENETDSLNFYSSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ R +G +AS+ ++ LRI + I + + D+ +FPHD D +NG
Sbjct: 124 RFPAKEKII-RIYGETPFLASECHDNWNRLRIRYAIPESDKDYEIGKVFPHDINYDQING 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
++ KGCYIGQEVVSR+ HR R+R +++ +L P G+ I+ +G+LG +
Sbjct: 183 LAFNKGCYIGQEVVSRMHHRRAARRRILLVKSQHELIP-GANIVAGTKILGSLGTCAANE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
ALA+ RID + A+ TV V V S
Sbjct: 242 ALALMRIDHIKDAMDHNTPFTVKDVPVTIS 271
>gi|154245363|ref|YP_001416321.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
gi|154159448|gb|ABS66664.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
Length = 292
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 131/273 (47%), Gaps = 4/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M VYL+++ I+ G A FL +IT +V T+ AR A+LTPQGKI+ FL
Sbjct: 1 MPVVYLTDRVLIRATGPEASKFLHGVITCNVQTMATGDARYGALLTPQGKIISDFLFYAE 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F+ ++ + + L+ +L F++LR+ V V + + + D R
Sbjct: 61 GDDAFLFDVPAERAEDLLKRLTFHRLRAKVTFTKADDLAVAAVFGDAAEVPEGALYPDPR 120
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ L + ++SD Y RI GI DF FPH+A MD L G+
Sbjct: 121 LAALGQRLVLPLTAAQALSSDPALYEAHRIALGIPKGGPDFTYGDTFPHEADMDQLGGVD 180
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR++HR+ R R ++ D P +G I D +G + V +
Sbjct: 181 FKKGCYVGQEVVSRMEHRSTPRNR--LVEVLFDTPLATGQEITAGDKSVGQVLSVTDGRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+A R+D+ + A G+ L V V+ P W
Sbjct: 239 IATVRLDRANDAKTDGVPLLAGEVPVELRRPDW 271
>gi|170750384|ref|YP_001756644.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM
2831]
gi|170656906|gb|ACB25961.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM
2831]
Length = 283
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A LQ ++T +V TL AR A+LTPQGKIL FLIS+I
Sbjct: 1 MPVALLPDRALVTVTGPDATTLLQGVLTCNVETLRPGEARLGALLTPQGKILFDFLISRI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D F ++ + L +L Y+LR+ I P V +W + + D R
Sbjct: 61 P-DGFRFDVLADRAADLAKRLTLYRLRAQATIAADPTVAVAAAWAGATPPAAEAVADTRA 119
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 VDLGARLYAAAGAFSADAAEAD-YHAHRIALGVPEGGRDFAFGDAFPHEALMDQLGGVDF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R R + D P G+ I +GT G G + LA
Sbjct: 179 RKGCYVGQEVVSRMQHRGTARTRILAAAYPDAAPAPGTEITAGGKVLGTAGSAAGNRGLA 238
Query: 241 IARIDKVDHAIKKG 254
R+D++ A+ G
Sbjct: 239 TIRLDRLGDALAAG 252
>gi|170740023|ref|YP_001768678.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46]
gi|168194297|gb|ACA16244.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46]
Length = 277
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ ++T +V TLP AR A+LTPQGK+L+ FLIS+
Sbjct: 1 MPIALLPDRAVLSVAGDDAPGFLQGLVTCNVETLPPGEARLGALLTPQGKVLIDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E F L++ R+ L +L Y+LR+ V P+ V+ W + + D R
Sbjct: 61 AEG-FALDVARALLPDLTRRLTLYRLRAKVAFAEAPLR-VLAVWGGPP--AGAWLRDGRL 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
H G + + Y RI G+ + DF FPH+ALMD L G+
Sbjct: 117 PALGWRRHAGEGEGPAPDATAEDYAAHRIGLGVPEGGADFALGDAFPHEALMDQLGGVDF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203
KGCY+GQEVVSR+QHR R R
Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTR 199
>gi|163867998|ref|YP_001609202.1| aminomethyltransferase [Bartonella tribocorum CIP 105476]
gi|161017649|emb|CAK01207.1| aminomethyltransferase [Bartonella tribocorum CIP 105476]
Length = 290
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 156/273 (57%), Gaps = 18/273 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K
Sbjct: 5 QNAICLKNRGIIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGK- 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSN--SSFID 117
ED + ++I+ S D+L +LL YKLR V I QP+ +V +SW E N S+F+D
Sbjct: 64 REDGYFIDIEISLADTLYKRLLLYKLRKKVEI-TQPLQELVTVSWKNESDTLNFDSNFVD 122
Query: 118 ERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
+RF + ++ R +G +AS D T+++LRI + I + D+ IFPHD D +N
Sbjct: 123 KRFPEQEKII-RIYGKIPFLASEDYDTWNQLRIRYAIAESGQDYEVGKIFPHDINYDQIN 181
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT-----LG 231
G+S KGCYIGQE+VSR+ HR R+R +II DL P S IE GT LG
Sbjct: 182 GLSFNKGCYIGQEIVSRMHHRRAARRRILIIKSQCDLSPQSS------IEAGTKVLGHLG 235
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
V +ALA+ RID V A+ + TV + V
Sbjct: 236 TCVTNEALALMRIDHVKDAMDHNIPFTVKNIPV 268
>gi|154251204|ref|YP_001412028.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
gi|154155154|gb|ABS62371.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
Length = 316
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 19/280 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--IEED 63
LS + ++V G A FLQ ++T +V A +A+LTPQGK LL F I+ ++D
Sbjct: 26 LSKRGVLRVAGPEARSFLQGLVTNNVDLATGMTAIYAALLTPQGKFLLDFFIAADPADKD 85
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHT--FSNSSFIDERF 120
+L+ D ++ ++L+ +L YKLR+ V IE VL+ WN++ + F D R
Sbjct: 86 AVLLDCDGARAEALMKRLTMYKLRAKVTIEDLSEKLAVLALWNEDGSPLTEGPGFADPRL 145
Query: 121 SIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
G K S K YH LRI HG+ D DF P FP + +
Sbjct: 146 PGMGRRAILASGEVGKAISAAKAREAGEDEYHRLRIMHGVGDAAQDFEPDRTFPLEVNIA 205
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL--G 231
LNGI KGC++GQEV SR + R +RKR + D+PP G+ + E+GT+ G
Sbjct: 206 ELNGIDFHKGCFVGQEVTSRTKRRGSVRKRLLPAHVEGDMPPHGTQVKGVAREVGTILSG 265
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ LA+ R+D + +G L ++ P W
Sbjct: 266 DAETSRVLALLRLDLI-----RGSVLEAGYAEIRPEVPSW 300
>gi|319408291|emb|CBI81944.1| aminomethyltransferase [Bartonella schoenbuchensis R1]
Length = 288
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 8/267 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NTISLKNRKIIKVIGEKATRFLQALITTDVEKINSQELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNS--SFIDE 118
+ ++++I D+ +L+ YKL + V I QP+ VV + W E + + SFID+
Sbjct: 66 QG-YMIDIAAPLADTFQQRLILYKLHTKVEI-TQPLQLVVTVFWKTEISTCDFDLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ R +G +A + ++ +RI + I + D+ +FPHD D ++G
Sbjct: 124 RFPKKEKMV-RVYGKIPFLAPEHNDNWNRMRIRYAIAESGQDYEIGKVFPHDINYDQISG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+S KGCYIGQEVVSR+ HR R+R +I+ G L P GS I +G LG V +
Sbjct: 183 LSFNKGCYIGQEVVSRMHHRRAARRRFLIVKGQHKLMP-GSTIQAGTKILGELGTCVENE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264
ALA+ RID V + K + T+ + V
Sbjct: 242 ALALMRIDHVKDVMDKHIPFTIENLPV 268
>gi|300023505|ref|YP_003756116.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC
51888]
gi|299525326|gb|ADJ23795.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC
51888]
Length = 298
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 22/273 (8%)
Query: 1 MSSV---YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
MSSV L+++ ++V G + LQ+++T ++ L AR + +L+PQGKIL F I
Sbjct: 1 MSSVKIARLTDRGVVRVDGADSEKLLQSLVTNEIEGLNAGEARFAGLLSPQGKILFDFFI 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-----EHTFS 111
+ E ++L++ +K L+ +L YKLR++V I + P V W+ T +
Sbjct: 61 VRTEM-GYLLDVAAAKAADLVKRLTMYKLRADVTITDASPGFAVYAVWDDGAAALTATRA 119
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164
F D R V W +D + Y LR+ G+ + DF
Sbjct: 120 CVHFNDPRHPAMGV----RWLMQSPPPADAQVVELAHIDYDALRVRLGVPEAGKDFEFGD 175
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
+PH+A DL NG+S TKGCY+GQE+V+R+Q++ ++RKR + I+ T L SG+ I D
Sbjct: 176 AYPHEADYDLFNGVSFTKGCYVGQEIVARMQNKTVVRKRVVKISATAPL-ISGAEIHLGD 234
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ IG +G V G LA+ R+D+ A K L
Sbjct: 235 VAIGRVGTVDGLHGLAMVRLDRAIEAQDKNQRL 267
>gi|197104040|ref|YP_002129417.1| aminomethyltransferase [Phenylobacterium zucineum HLK1]
gi|196477460|gb|ACG76988.1| aminomethyltransferase [Phenylobacterium zucineum HLK1]
Length = 268
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 138/273 (50%), Gaps = 13/273 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ V L++++ I V G FLQ ++T DV TL AR A+LTPQG+ LLY L +
Sbjct: 1 MTIVQLTSRAVIAVGGPEWRSFLQGLLTQDVETLQPGQARFGALLTPQGR-LLYDLFAVG 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
ED +L+++ + RD+L+ +L Y+LR+ V + P V ++ +I R
Sbjct: 60 AEDGCLLDVEAAHRDALLQRLTMYRLRAKVELSA-PDTAVFAAFPDA---PGPGWI--RD 113
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R +G E+ SD Y R+ G+ P D+ + +P +A DLL GI
Sbjct: 114 PRRPELGWRGYGLAERATSDEAAYDAHRLRLGVPGP-ADWGTDSTYPIEADFDLLAGIDF 172
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQE SR++ R I+ R + I P SG+ IL D+ G + +A+A
Sbjct: 173 KKGCFVGQETTSRMKRRGQIKSRMLPIVFEGPPPASGTEILAGDLRAGEVLSGTEGRAMA 232
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ R+D+ G LT G V+ P W++
Sbjct: 233 LVRLDRA-----LGADLTADGRPVRVEPPAWFE 260
>gi|298293892|ref|YP_003695831.1| folate-binding protein YgfZ [Starkeya novella DSM 506]
gi|296930403|gb|ADH91212.1| folate-binding protein YgfZ [Starkeya novella DSM 506]
Length = 282
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++ ++ G A FL ++TA T AR SA+LTPQGKI+ ++
Sbjct: 1 MPIAILKERAVARIAGADAAHFLDNLLTAR--TPEPGEARYSALLTPQGKIVADMIVVAT 58
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDER 119
E F L++ R L+ +L Y+LR+ V I + V ++W ++ ++ D R
Sbjct: 59 E-GGFRLDVPRLAVPDLVKRLQLYRLRAKVEIGVLDDLVVAVAWGGSSPLVDAFAYDDPR 117
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
G +IA + +H RI G+ + DFL FPH+A MD L GI
Sbjct: 118 LPELGRRFLLPAGEASQIAMVPEAQWHAHRIALGVPEGGMDFLYGDAFPHEADMDQLGGI 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
KGCY+GQE+VSR+QHR R R P + G P G+PIL IG LG V
Sbjct: 178 DFDKGCYVGQEIVSRMQHRGTARTRIIPFALCGPS--PAEGTPILAGGKSIGRLGSGVEG 235
Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+AL + R+D+++ A + G + P W
Sbjct: 236 RALGLVRLDRLEEARAARHVIEADGAALVPERPDW 270
>gi|16124640|ref|NP_419204.1| aminomethyltransferase [Caulobacter crescentus CB15]
gi|13421542|gb|AAK22372.1| aminomethyltransferase, putative [Caulobacter crescentus CB15]
Length = 263
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++++ I V G FLQ ++T DV TL R + +LTPQGK LLY L ED
Sbjct: 9 LASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGK-LLYDLFVAGAEDGA 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + RD+++ +L Y+LR+ V E+ + V++ T + D R
Sbjct: 68 LLDVAAAHRDAILTRLSMYRLRAKV--ELVASDRPVIAVFGGATSGEGLYADPRLP---A 122
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + +D Y R+ G+ P TD+ +P +A DLL GI KGC+
Sbjct: 123 LGARAY-DDRATNADEDVYEAHRLALGVPGP-TDWGSEATYPIEANFDLLAGIDFKKGCF 180
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ R+D
Sbjct: 181 VGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALLRLD 240
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271
+++ G+ALTV G V+ P W
Sbjct: 241 RIE-----GVALTVEGRPVRVERPDW 261
>gi|114569363|ref|YP_756043.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis
maris MCS10]
gi|114339825|gb|ABI65105.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis
maris MCS10]
Length = 273
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 11/245 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + V G A LQ +ITADV TL R A+LTPQGKIL+ F++ + DT
Sbjct: 11 LPDRQIMSVSGPDARDLLQRLITADVQTLSAGTCRPGALLTPQGKILVDFMMFA-DGDTV 69
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L++ D L+ +L +KLR+ I + N +L+ F S D R
Sbjct: 70 WLDVPAGAADGLLKRLTMFKLRARAEIVL---NTNILALWSTTPFPGSCE-DPRLG---G 122
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+HR G + AS+ + + I GI D+ + +FP D +D G+ KGC+
Sbjct: 123 RVHRGLG---EAASETRALDMIEIEAGIPAFGRDYGEADVFPTDVNLDAFGGVGWKKGCF 179
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
IGQEVVSR++ R IRKR + T + PP G+ ++ +G + G A+ +AR+D
Sbjct: 180 IGQEVVSRMKRRGTIRKRSLPATFAAEAPPPGTAVMAGPTTVGAISSASGHHAVILARLD 239
Query: 246 KVDHA 250
++ A
Sbjct: 240 RLRAA 244
>gi|221233328|ref|YP_002515764.1| aminomethyltransferase family protein [Caulobacter crescentus
NA1000]
gi|220962500|gb|ACL93856.1| aminomethyltransferase family protein [Caulobacter crescentus
NA1000]
Length = 281
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++++ I V G FLQ ++T DV TL R + +LTPQGK LLY L ED
Sbjct: 27 LASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGK-LLYDLFVAGAEDGA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + RD+++ +L Y+LR+ V E+ + V++ T + D R
Sbjct: 86 LLDVAAAHRDAILTRLSMYRLRAKV--ELVASDRPVIAVFGGATSGEGLYADPRLP---A 140
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + +D Y R+ G+ P TD+ +P +A DLL GI KGC+
Sbjct: 141 LGARAY-DDRATNADEDVYEAHRLALGVPGP-TDWGSEATYPIEANFDLLAGIDFKKGCF 198
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+ R+D
Sbjct: 199 VGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALLRLD 258
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271
+++ G+ALTV G V+ P W
Sbjct: 259 RIE-----GVALTVEGRPVRVERPDW 279
>gi|295687807|ref|YP_003591500.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756]
gi|295429710|gb|ADG08882.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756]
Length = 264
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 23/271 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++++ I V G FLQ ++T DV TL R S +LTPQGK LLY L ED
Sbjct: 9 LTSRAVIAVSGPDWRSFLQGLLTQDVETLAPGELRFSGLLTPQGK-LLYDLFVAGTEDGA 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L++ + RD+L+ +L Y+LR+ V +E +P++ V + D R
Sbjct: 68 LLDVQAAHRDALLQRLSMYRLRAKVTLEASDRPVSAVFGG----AVAGQGLYADPRLP-- 121
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
L R + + +D Y R+ G+ P D+ +P +A DLL GI KG
Sbjct: 122 -ALGARAY-DDRAANADEDAYDAHRLALGVPGP-ADWGEEKTYPIEANFDLLAGIDFKKG 178
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGK--KALA 240
C++GQE SR++ R I+ R + IT D PP+ G+ +L ++ G V+ G+ +ALA
Sbjct: 179 CFVGQETTSRMKRRGTIKNRMLPIT-FDGPPPAFGAEVLAGELRAGE--VLGGRDGRALA 235
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ R+D++D G LTV G V P W
Sbjct: 236 LLRLDRID-----GADLTVDGRPVAVDRPAW 261
>gi|254419445|ref|ZP_05033169.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas
sp. BAL3]
gi|196185622|gb|EDX80598.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas
sp. BAL3]
Length = 272
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 26/279 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M LS+++ I + G+ A PFL ++T DV TL R A+L+P G++L I
Sbjct: 1 MPIARLSSRALISITGEEARPFLHNLLTQDVETLGDGELRFGALLSPPGRLLFDLFILG- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DER 119
E + +L++ +R++LI +L YKLR+ V + V +W + + FI D R
Sbjct: 60 EAEGVLLDVAAERREALIQRLSMYKLRAKVQVAAD-DRPVFAAWPD----APAGFIFDPR 114
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ + R +G A+ Y + R++ G+ DP D I+P +A DLLNGI
Sbjct: 115 TPL---MGGRLYGEAAADAT-EADYDQHRLSVGVPDPTADAPQDKIYPIEADFDLLNGID 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK-- 237
KGC++GQE SR++ R I+ R + I PP G+ +L ++ G V+ G++
Sbjct: 171 FQKGCFVGQETTSRMKRRGAIKNRMLAIDFDGPPPPFGAEVLKGELRAGE--VLSGRQRS 228
Query: 238 -----ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
A+A+ RID++D LTV G V+ P W
Sbjct: 229 DGGGSAMALLRIDRLDG------DLTVEGRPVRLRKPSW 261
>gi|114328650|ref|YP_745807.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316824|gb|ABI62884.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
Length = 278
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 130/253 (51%), Gaps = 3/253 (1%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIE 61
S L +++ + V G+ + FLQ +++ DV LT P + A +A+LTPQGK + F I +
Sbjct: 8 SALLPHRAVLAVTGEDRVTFLQGLVSNDVTLTAPGQ-AIWAAMLTPQGKWIADFFIFS-D 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+L+++ ++ LI KL ++LR+ V I + V W + S +
Sbjct: 66 GQRLLLDVEATQAAMLIQKLSRFRLRARVAISAESDLHVHAGWGSAPIPAGSVCVAPDPR 125
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ + G D Y R++ G+ D + D +A D LNGIS T
Sbjct: 126 LPEAGWRALTGAGILPEGDAAAYDTHRLSLGLPDGSADLEAEKTVLLEAGFDELNGISWT 185
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQE+ +R ++R ++++R + +TG LPP +P++ D E+GT+ GK LAI
Sbjct: 186 KGCYMGQELTARTRYRGLLKRRLVPVTGHAPLPPRETPLMQDGKEVGTMRSSRGKTGLAI 245
Query: 242 ARIDKVDHAIKKG 254
R++ + ++ G
Sbjct: 246 LRLEALHAPVQAG 258
>gi|258542812|ref|YP_003188245.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01]
gi|256633890|dbj|BAH99865.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01]
gi|256636949|dbj|BAI02918.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-03]
gi|256640002|dbj|BAI05964.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-07]
gi|256643058|dbj|BAI09013.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-22]
gi|256646113|dbj|BAI12061.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-26]
gi|256649166|dbj|BAI15107.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-32]
gi|256652153|dbj|BAI18087.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655210|dbj|BAI21137.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-12]
Length = 291
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 13/273 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
L N++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ +F++S ++
Sbjct: 10 LKNRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDDTC 69
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNS-SFIDERF 120
+L+ + ++L L ++LRS+V ++I + V ++W + N+ SF D R
Sbjct: 70 LLLDCATEQVENLKTTLQRFRLRSDVQLDITALP-VHVAWGNPPPDSVLENAISFRDPRL 128
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A L + I + + Y+ R+ G+ D D +A +DLL G+S
Sbjct: 129 EEAGWRLIDA-APDTLITATEQGYNLHRLVLGLPDGVQDCEVGRTLAAEANLDLLGGVSW 187
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV +R+ +R ++++R M + T LP G+P+L D +E+GTL LA
Sbjct: 188 KKGCYMGQEVTARMHYRTLVKRRLMPVAATSPLPAPGTPVLCDGVEVGTLRSSQDHVGLA 247
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ + D A + H + V+ P W +
Sbjct: 248 LLKTD----AANNQLTCAAHPLVVR--LPAWQE 274
>gi|302384135|ref|YP_003819958.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC
15264]
gi|302194763|gb|ADL02335.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC
15264]
Length = 265
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 15/268 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L++++ I+V G A PFL ++T DV T+ R A+L+P G+ LL+ L E D
Sbjct: 6 AHLTSRALIRVSGTDAKPFLHNLLTQDVETIADGEVRFGAMLSPPGR-LLFDLFLWGEAD 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L++ +R +LI +L YKLR+ V I + SW + +D R S
Sbjct: 65 GVVLDVAADRRAALIQRLSMYKLRAQVEIAADE-RPALASWP---GVAAGFVVDPRTS-- 118
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ R G + A++ + R++ G+ DP D +P +A DLLNGI KG
Sbjct: 119 -AMGGRAIGDHVPDATEAD-HDAHRLSVGVPDPAADAGSDRTYPIEANFDLLNGIDFQKG 176
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C++GQE SR++ R I+KR + +T P +G+ +L + G + A+A+ R
Sbjct: 177 CFVGQETTSRMKRRGEIKKRMLPLTFDGAAPAAGTEVLNGALRAGEVLTGRDGAAMALVR 236
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
+D++D L V G V +P W
Sbjct: 237 LDRLDG------PLMVEGRPVAVLYPEW 258
>gi|182677705|ref|YP_001831851.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633588|gb|ACB94362.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC
9039]
Length = 291
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 8/278 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ +L+++ +K+ G A L +IT +L AR SA+LTPQGK+L F I +
Sbjct: 4 GTCFLADRGVLKIVG-DATALLHKVITNTMLNFVPGEARYSALLTPQGKLLFDFFILPLP 62
Query: 62 EDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSS--- 114
E ++++ + + L+ ++ F+K+R+ +E + GV W + +
Sbjct: 63 EGPEAGYLIDCAKEQSADLLKRINFHKMRAKFTVEDVSEQFGVAAFWGSDPAPAIEGAVI 122
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
++D R L + + +D Y R++ G+ DF F HDA +D
Sbjct: 123 YLDPRAPEMGKRLIASRAALAALPADTTAYEAHRVSLGVPKGGVDFPYGDTFLHDANIDR 182
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
NG+ KGCY+GQEVV+R+ R RKR + + P G+ I + IG +
Sbjct: 183 CNGVDFKKGCYVGQEVVARVHFRRSARKRIIPLHFEGPTPALGTEIKAGETSIGQVSSTA 242
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G LA+ R+D+++ A G + V+A P +
Sbjct: 243 GAAGLAMLRLDRLEDARTAGTPVKAGEAVVEAFVPAEF 280
>gi|23015098|ref|ZP_00054885.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 300
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 25/290 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V+L ++ ++V G+ FLQ +++ D+ + A + +LTPQGK L + ++ D
Sbjct: 7 VHLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVFTGLLTPQGKFLYDLFVVELG-D 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQE------HT 109
F++E + ++ + L KL YKLRS V I + GV +++ E
Sbjct: 66 VFLIEAEAARLEDLRKKLSMYKLRSKVTIAVASNMAVFGLMGEGVAAAFDLEPQAGAATE 125
Query: 110 FSNSS-FIDERFSIADV--LLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFL 161
F+ S F+D R + + LL G A+D K ++ E RI G+ D + D
Sbjct: 126 FAGGSVFVDPRLAEGGLRALLPVDGGPRVLEANDFKPAPFHSWDEARIRLGLPDGSRDLE 185
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ + LNG+ KGCY+GQE+ +R ++R +++KR M + +P G+ I
Sbjct: 186 VDKALLLENGFEELNGVDFNKGCYMGQELTARTKYRGLVKKRLMPVEVNGPMPAPGTVIH 245
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ E G + G LA+ R+D+ GM TV R+ A+ P W
Sbjct: 246 LGEAEAGEMRSACGHAGLALIRLDQ--WRASGGMGFTVGTARLDAAKPKW 293
>gi|67459203|ref|YP_246827.1| glycine cleavage T-protein [Rickettsia felis URRWXCal2]
gi|67004736|gb|AAY61662.1| Glycine cleavage T-protein [Rickettsia felis URRWXCal2]
Length = 282
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 25/285 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--SKIEED 63
LSN+ IK+ G ++ FLQ ++T D+ Y + +L QG+ L F + K+EE
Sbjct: 5 LSNREIIKIIGLDSVKFLQNLVTNDICKSSYCY---TYLLNNQGRYLFDFFVYVHKLEE- 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L+ID+S + +LI+ L FYK RS + II+ +V S + + + D R+S+
Sbjct: 61 -IYLDIDKSNKAALIEYLNFYKFRSKIQIIDCSEEYKIVYSHQKLDIDTLVTSRDPRYSM 119
Query: 123 ---ADVLLHR--TWGHNEKIASD--------IKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+L R T G D + Y E + N I+D D + P+
Sbjct: 120 LGFRSILSSRGLTTGSRNTGKQDWIPWSSHGMTIYLEDKYNFAIIDGVEDLITDKSIPNM 179
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI 227
+ LN IS KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +I
Sbjct: 180 YGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKI 239
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G + KA+A+ R +K + K +TV G+++ S WY
Sbjct: 240 GVICTSYRNKAIALIREEK--YLACKKSDITVKGIKINLSLAPWY 282
>gi|329114590|ref|ZP_08243349.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001]
gi|326696070|gb|EGE47752.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001]
Length = 291
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
L ++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ +F++S ++
Sbjct: 10 LEKRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDDTC 69
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNS-SFIDERF 120
+L+ + ++L L ++LRS+V +E+ + V ++W + N+ SF D R
Sbjct: 70 LLLDCATEQAENLKTTLRRFRLRSDVQLELTALP-VHVAWGNPPPDSVLENAISFRDPRL 128
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A L + I + + Y+ RI G+ D D +A +DLL G+S
Sbjct: 129 EDAGWRLIDA-APDTPITATEQDYNLHRIILGLPDGVQDCEVGRTLAAEANLDLLGGVSW 187
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV +R+ +R ++++R M I T LP G+ +L + +E+GTL LA
Sbjct: 188 KKGCYMGQEVTARMHYRTLVKRRLMPIAATSPLPAPGTSVLCNGVEVGTLRSSQDHVGLA 247
Query: 241 IARIDKVDHAI 251
+ + + ++ +
Sbjct: 248 LLKTEAANNQL 258
>gi|217977284|ref|YP_002361431.1| folate-binding protein YgfZ [Methylocella silvestris BL2]
gi|217502660|gb|ACK50069.1| folate-binding protein YgfZ [Methylocella silvestris BL2]
Length = 279
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+L+++ ++V G A FLQ +IT VL + +R SA+L+PQGK++ F + + E
Sbjct: 7 FLADRGVVRVLGAEAEKFLQRLITNSVLAIAPGESRFSALLSPQGKLMFDFFVVPLPEGP 66
Query: 65 ---FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + R++ L+ +L +K+R+ + IE + GV E + + R
Sbjct: 67 EAGYYFDCVRAQAPDLVKRLNLHKMRAKISIEDLSETLGVAALIAGEAPSGIGALV-YRD 125
Query: 121 SIADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
A + R E + SD Y RI G+ DF+ F D +D LN
Sbjct: 126 MRAPGMGERVIASREALERISDSDESAYEARRIAAGVPRGGRDFVYGDAFVQDVNLDWLN 185
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
G+ KGCY+GQEVV+R+ +R +KR + + + P G I +G +G + G
Sbjct: 186 GVDFKKGCYVGQEVVARVHYRKSAKKRIVKFSFEGEPPAPGVEIAAGGPPLGQVGSISGS 245
Query: 237 KALAIARIDKVD 248
+ LA+ R+D+++
Sbjct: 246 EGLAMIRLDRLE 257
>gi|296116365|ref|ZP_06834980.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769]
gi|295977065|gb|EFG83828.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769]
Length = 278
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 20/278 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62
YL +++ + V GK + FLQ +++ D+ T+ A +A L+ QGK L +F+ +
Sbjct: 5 AYLPDRAVLAVSGKDRVSFLQGLVSNDMTTVTPDRAAWTAFLSAQGKWLADFFVFADPHG 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS- 121
+ +L+ D ++ +L +L Y+LR++V I + V W+ ++ DERF
Sbjct: 65 ERLLLDCDATQAATLRTRLSRYRLRTDVDIS-ETGYAVHAQWD------GTAPADERFPG 117
Query: 122 -----IADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ D+ GH + +D Y R++ G+ D D +A D L
Sbjct: 118 SADPRLPDIGWRMLLGHVAPDVTADALDYDRHRLSLGLPDGVRDCESGKTLLLEANFDQL 177
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NGIS TKGCY+GQE+ +R ++R ++R+ + + G DLP +PI+ D ++G +
Sbjct: 178 NGISWTKGCYMGQELTARTRYRGLVRRHLLPVEGAHDLPEPATPIMHDGHKVGEIRSSRD 237
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ +A+ R H G+ H V ++ P W++
Sbjct: 238 QAGMAMIR---SSHIHTPGLTAAGHPVSIR--VPPWFR 270
>gi|218459788|ref|ZP_03499879.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli Kim 5]
Length = 131
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%)
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+DF FPHD L+DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +
Sbjct: 3 GSDFALQDAFPHDVLLDLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGT 62
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G+ I D +GTLG V G LAI R+D+ A+ +G L G V + P W
Sbjct: 63 GTEITAADKPVGTLGSVAGGSGLAIVRVDRAGAAMAEGTPLLAGGTPVALALPQW 117
>gi|254293508|ref|YP_003059531.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814]
gi|254042039|gb|ACT58834.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814]
Length = 274
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+ + V G A FL ++T VL + +R +A+L PQGKI+ L+ K E
Sbjct: 5 VCLENRVVLCVDGVDAETFLNGLLTNSVLNMEMGQSRYAALLMPQGKIICDLLLLKTET- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F+L++ ++L+ +L ++L++ V I ++ GV + H + +R
Sbjct: 64 GFLLDVPAQADEALMKRLKMFRLKAQVDISLKDDLGVYAFIDDGHPDPRHPDMPKR---- 119
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ W + + K Y+ RI + + DF + +FP D MDLLNGI KG
Sbjct: 120 QIGPKDLWENTSR-----KDYNITRIKLNVPELGKDFGDNEVFPADINMDLLNGIDFKKG 174
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C++GQEVVSR++ R R+R + + P + +P+ + +G + ALA R
Sbjct: 175 CFVGQEVVSRMKRRGTARRRTLAFHFPNGAPDATTPLYLGETLLGEISSSTSDYALARIR 234
Query: 244 IDKVDHAIKKG 254
ID++ A +G
Sbjct: 235 IDRLAKAQAEG 245
>gi|288958954|ref|YP_003449295.1| protein [Azospirillum sp. B510]
gi|288911262|dbj|BAI72751.1| protein [Azospirillum sp. B510]
Length = 308
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 1 MSSVY--LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
MS+ Y L +S + V G+ FLQ +++ DVL + A + LTPQGK L F++
Sbjct: 1 MSAGYTVLDRRSVVAVTGEDRKAFLQGLVSNDVLRVTPDHAAYALFLTPQGKFLHDFMMV 60
Query: 59 KIEEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---------------GV 100
+ E+D +L+ + +R L+ +L YKLRS + +E + G+
Sbjct: 61 ESEDDAGPALLLDPETDRRADLLRRLKMYKLRSKIALEDRAERLRVVIAFGEGALAALGL 120
Query: 101 VLSWNQEHTFSNS-SFIDERF-SIADVLLHRTWGHNEKIAS---------DIKTYHELRI 149
F+ +F D R + L G +A+ D Y LR+
Sbjct: 121 PAEPGAARPFAGGVAFTDPRLPGLGARLFLPVNGPVNGLAALEAAGLGGRDAAEYDRLRL 180
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ G+ D D +P P ++ MD LN IS KGCY+GQE+ +R ++R +I+K+ +T
Sbjct: 181 SLGVPDGTLDLIPEKSIPLESRMDALNAISWDKGCYMGQELTARTKYRALIKKKLFPVTF 240
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+P +G+P+ D E+G + ALA+ R++ V A G L + P
Sbjct: 241 DGPIPEAGTPVTLDGKEVGEIRSGRDAAALALLRLEDVQLAAANGSVLQAGSATLTPCDP 300
Query: 270 HW 271
W
Sbjct: 301 EW 302
>gi|162149036|ref|YP_001603497.1| aminomethyltransferase protein (glycine cleavage)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209545215|ref|YP_002277444.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl
5]
gi|161787613|emb|CAP57209.1| putative aminomethyltransferase protein (glycine cleavage)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532892|gb|ACI52829.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl
5]
Length = 291
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 11/270 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62
+L +++ + + G + FLQ +++ DV + A +A LTPQGK +FL ++ +
Sbjct: 22 AFLPDRAVLAISGADRVSFLQGLVSNDVAAVAPGQAVWTAFLTPQGKWQADFFLFAEADG 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFS 121
+ +L+ + ++ D L +L Y+LRS+V I+ P V +W +S+
Sbjct: 82 ERLLLDCEAAQADMLRQRLARYRLRSDVSID--PTGFAVHAAWGAVPPMLDSAIGAPDPR 139
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+A+ A+D Y R+ G+ D + D +A + LNGIS T
Sbjct: 140 LAEAGWRLILPRPTPDAADHAAYDAHRLALGLPDGSRDCEEGKTLLLEANFEALNGISWT 199
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQE+ +R ++R ++R++ + ++G LPP G+P++ + E G + + LA+
Sbjct: 200 KGCYMGQELTARTRYRGLVRRKLLPVSGA-ALPPPGTPLMHGEKEAGIMASSRDGRGLAM 258
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
R+D + LT G V+ P W
Sbjct: 259 LRLD------HRSAELTAEGHSVQVHIPSW 282
>gi|294084896|ref|YP_003551656.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664471|gb|ADE39572.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 339
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 25/287 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++ + FI + G A+ FLQ+IITA+V TL R A+LTPQG++L+ F+I + +D
Sbjct: 47 AHMPDMGFIAIAGIEAVDFLQSIITANVETLDSGAMRQGALLTPQGRVLIDFMIYRTSQD 106
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFS 121
+L+ + ++RD L +L Y+LR V IE + + WN + ++ F D R
Sbjct: 107 ELLLQCEANRRDDLYTRLRRYRLRRPVTIETRDDLACYVWWNLDIVPASMPHLFADRRDG 166
Query: 122 IADVLLHRTWGHN-EKIASD-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
L +R G++ + + SD I +H +RI I D P ++ +D
Sbjct: 167 ---ALGYRYLGNDAQTVLSDHGATSGTIDEWHAIRIAKAIPQGALDLTPERALMLESGLD 223
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIG--- 228
L+ + KGCYIGQEV +R +R ++++R P +I D +P + I+ DD IG
Sbjct: 224 HLDAVDFGKGCYIGQEVTARTHYRGLVKRRLAPFMI---DAMPEPSADIMLDDAVIGRCK 280
Query: 229 TLGVVVGKKALAIARIDKVD-HAIK---KGMALTVHGVRVKASFPHW 271
++ + G A+ + + D H ++ + +LT+ + + P W
Sbjct: 281 SIAPLPGGGAITLGLVKLSDLHMLQDSGQNPSLTIDSHVAQLALPDW 327
>gi|119383483|ref|YP_914539.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus
denitrificans PD1222]
gi|119373250|gb|ABL68843.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus
denitrificans PD1222]
Length = 238
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 17/249 (6%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + V G+ + FLQ ++T V P +A+LTPQGK L FLI + + +++
Sbjct: 2 RRILAVSGEDRVEFLQGLVTNKVGPEPCW----AALLTPQGKYLADFLIVP-DGERLLVD 56
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D L+ +L YKLRS V +E P + V + +D R D L
Sbjct: 57 VDARLEGDLMRRLSMYKLRSKVALE--PTDLTVARGT--GPAPEGAIMDPRH---DALGW 109
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G SD + +R+ H I + + +P+ F +A + L+G+ KGCY+GQ
Sbjct: 110 RLYGGEGDDGSD---WDAIRVAHCIPETLVELIPNETFILEAGFERLHGVDFRKGCYVGQ 166
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAIARIDKV 247
EV +R++H+ +RK ++ G + P G+PIL D E+GTL G +A+A R D++
Sbjct: 167 EVTARMKHKTELRK-GLVTVGIEGAAPVGTPILMADGREVGTLFTQSGDRAIAYMRFDRM 225
Query: 248 DHAIKKGMA 256
+ G A
Sbjct: 226 GEGLVAGDA 234
>gi|83945377|ref|ZP_00957725.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis
alexandrii HTCC2633]
gi|83851211|gb|EAP89068.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis
alexandrii HTCC2633]
Length = 298
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 12/271 (4%)
Query: 1 MSSVYLS---NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
M+ YL+ +++ I + G A FLQ ++T + A SA+LTPQGK+L I
Sbjct: 24 MTEPYLTTLPDRAVIAITGAEARGFLQRVLTQGPEGVKPGAAMFSALLTPQGKVLADLFI 83
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----HTFSNS 113
E + ++ S+ D+L+ + Y++R++ IE + V+ + + + S
Sbjct: 84 LDDGEGGLLFDVPASEADALLKRFTLYRMRADATIERREDLSVIAAAGEPAEELRMVALS 143
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ D R + + R SD Y RI G + +D+ P+ +F D D
Sbjct: 144 AAPDPRNA---AIGWRGVAPAGGPDSDRDLYERARIQAGAPELGSDYGPAEVFSTDVNHD 200
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
LL+GI+ KGC++GQEV SR+ + +RKR + + G D + + + +G + V
Sbjct: 201 LLSGINYKKGCFVGQEVASRMHRKGGVRKRSVRLQG--DGLKTQDEVKVGETVLGPVSSV 258
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G ALA RID++ ++ G L V+G V
Sbjct: 259 SGDHALARLRIDRLKDGLQAGDTLKVNGAPV 289
>gi|167648315|ref|YP_001685978.1| folate-binding protein YgfZ [Caulobacter sp. K31]
gi|167350745|gb|ABZ73480.1| folate-binding protein YgfZ [Caulobacter sp. K31]
Length = 293
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 29/289 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L +++ I V G FL ++T +V TL R + +LTPQG+ LL+ L D
Sbjct: 10 AHLDSRAVIAVSGPDWKSFLNGLLTQEVETLAPGELRFAGLLTPQGR-LLHDLFVAGATD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSSFIDE 118
+L++ RD+++ +L Y+LR+ V + P++ + S DE
Sbjct: 69 GALLDVAADHRDAILARLTMYRLRAKVELAASPLDVFSQFSALPGEGPGPDPEAGSAPDE 128
Query: 119 RFS-----------IADVLL----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
S AD L R + + + + Y R+ G+ P D+
Sbjct: 129 SGSRPSPGRADHGWFADPRLPSLGARAYAQDLPVTASEDDYDAHRLAQGVPGP-ADWGTD 187
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILT 222
+P +A DLLNGI KGC++GQE SR++ R I+ R M+ D PP+ G+ +L
Sbjct: 188 RTYPIEANFDLLNGIDFKKGCFVGQETTSRMKRRGTIKTR-MLPIAFDGPPPAFGTEVLA 246
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
++ G + +A+A+ R+D+V +G ALTV G V P W
Sbjct: 247 GELRAGEVLSGRDGRAMALLRLDRV-----EGAALTVDGRPVSVERPDW 290
>gi|195445833|ref|XP_002070506.1| GK10994 [Drosophila willistoni]
gi|194166591|gb|EDW81492.1| GK10994 [Drosophila willistoni]
Length = 353
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 131/301 (43%), Gaps = 40/301 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62
L N+ I+V G +PFLQ ++T DV L + S L G++L +I +
Sbjct: 45 LKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIYRTNN 104
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVII-----EIQPI-----NG-----VVLSWNQ 106
+T++LE DR L +++R + I E P NG V + N
Sbjct: 105 PETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHATHNL 164
Query: 107 EHTFSNS-----SFIDERFSIADV----LLHRTWGHNEKIASDI---KTYHELRINHGIV 154
F S S + D+ L+ W +NE +A+ Y LR G+
Sbjct: 165 PELFVASDPRLPSLGTRVLAPTDISWAKLVKGFWQNNEVVATPATADNNYQLLRYKQGVG 224
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T
Sbjct: 225 EGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT---A 281
Query: 215 PSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
P GS + LG V G + +A+ RI++V + LTV G R A P W
Sbjct: 282 PLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPEW 338
Query: 272 Y 272
+
Sbjct: 339 W 339
>gi|315498153|ref|YP_004086957.1| folate-binding protein ygfz [Asticcacaulis excentricus CB 48]
gi|315416165|gb|ADU12806.1| folate-binding protein YgfZ [Asticcacaulis excentricus CB 48]
Length = 269
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-------SAILTPQGKILLYFL 56
+ L +++ I + G FL + D+ + +A G A LTPQGK+
Sbjct: 5 IALPHRALIALSGPDWGKFLNGQTSIDLENIFDAVAAGENRHLYYGAFLTPQGKLSADVF 64
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
I + DT +++D RD L +L +KLR+ V + +P V S+++
Sbjct: 65 ICPRDSDTVWIDVDAGVRDELFTRLNMFKLRAKVTLS-KPEAKVYASFSE-------GLP 116
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D R L+R +G E + TY E R+ G+ +P DF ++P D MDL+
Sbjct: 117 DPRAPG----LYRAYGTFEAMGG-FTTYTEFRLTQGVAEPGLDFPKDYLYPIDINMDLIA 171
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
I KGC++GQE SR++ R I+ R P+ GT GS +L + G +
Sbjct: 172 AIDFKKGCFVGQETTSRMKRRGTIKNRLIPLSHNGTFAF---GSEVLLGERRAGEILASA 228
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
K+LA+ R+D++D LT G V + P W
Sbjct: 229 NGKSLALMRLDRLDG------DLTCAGDAVTLAVPDW 259
>gi|195453713|ref|XP_002073908.1| GK12899 [Drosophila willistoni]
gi|194169993|gb|EDW84894.1| GK12899 [Drosophila willistoni]
Length = 353
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 127/301 (42%), Gaps = 40/301 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62
L N+ I+V G +PFLQ ++T DV L + S L G++L +I +
Sbjct: 45 LKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIYRTNN 104
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVII-----EIQPINGVVLSWNQEHTFSNSSFI 116
+T++LE DR L +++R + I E P + + +
Sbjct: 105 PETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHATHNL 164
Query: 117 DERFSIADV-------------------LLHRTWGHNEKIASDI---KTYHELRINHGIV 154
E F AD L+ W ++E +A+ Y LR G+
Sbjct: 165 PELFVAADPRLSSLGTRVLAPTDISWAKLVKGFWQNSEVVATPATADNNYQLLRYKQGVG 224
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T
Sbjct: 225 EGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT---A 281
Query: 215 PSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
P GS + LG V G + +A+ RI++V + LTV G R A P W
Sbjct: 282 PLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPEW 338
Query: 272 Y 272
+
Sbjct: 339 W 339
>gi|144898986|emb|CAM75850.1| Glycine cleavage T protein (aminomethyl transferase)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 274
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++ + V G FLQ +I+ DV + A +A LTPQGK L +++ + DT +++
Sbjct: 11 RTVLNVAGDDRKTFLQGLISNDVAKIAPGQALWAAFLTPQGKFLWDLFLTE-QGDTVLID 69
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D + ++ KL YKLRS V I + V + + D R L+
Sbjct: 70 VDAATAEAFRKKLSLYKLRSKVTITTTDL-AVFAVFGGDGALPEGVAADTRLPAMGGRLY 128
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
+ + + + R G+ D D + + D L+G+ KGCY+GQ
Sbjct: 129 ASQPPADMAEVPLAAWDAWRFAQGVPDGARDLIVDKSLLLENGFDELSGVDFNKGCYMGQ 188
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
E+ +R ++R ++RKR + ++ P G+P+L ++E G + LA+ R++
Sbjct: 189 ELTARTKYRGLVRKRLLPVSFDGAAPEVGTPVLVGEVEAGKMRSGGDGAGLAMIRLEH-- 246
Query: 249 HAIKKGMALTVHGVRVKASFPHW 271
++ G LT G + + P W
Sbjct: 247 --LRAGTPLTCGGKALAVTVPAW 267
>gi|190570501|ref|YP_001974859.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|213019260|ref|ZP_03335067.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|190356773|emb|CAQ54134.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|212995369|gb|EEB56010.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 265
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L+N+S I + G FLQ +IT D+ L + A S +L PQGK L F + I
Sbjct: 1 MGYIPLANRSLISLYGPDTRDFLQGVITNDINKLSSQQAIYSLLLNPQGKYLYDFFL--I 58
Query: 61 EEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS 114
E D +I LE + + +I+KL L++ + + I+ I+ GV+ S S
Sbjct: 59 EHDKYIYLECENAHLQQIIEKLDL--LKTYLRVRIKDISSLYKVGVLFDAKLAKCSSKSQ 116
Query: 115 --FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTI 165
F D R H+ G H ++I D Y ++RI + + D D + ++
Sbjct: 117 VIFQDPR--------HKLLGMRIIHEDEIKEPVGDFIQYEKVRIKNLVPDGAKDMVQNSS 168
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-D 224
FP L+D +NGIS KGCYIGQEVV+R+ + R++ ++ G + LP G+ ++++ +
Sbjct: 169 FPLQYLIDKINGISFNKGCYIGQEVVNRMSRQEKFRRKLYLVEGKNALPNIGTKVISEHN 228
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
E+G L V LA+ K HA L V GV +K
Sbjct: 229 EEVGELRSSVDNIGLALLNTGK-SHA-----NLYVGGVSIKT 264
>gi|149203599|ref|ZP_01880568.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
gi|149142716|gb|EDM30758.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
Length = 248
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 14/250 (5%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ +++ GK A+ FLQ ++T D+ L + + +AILTPQGK L FL+S+ +D L
Sbjct: 2 TRRILEITGKDALQFLQGLVTNDLQKLDHGLVY-AAILTPQGKYLADFLLSR-HDDAIRL 59
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
++D S L+ +L YKLR++V I+ + + +D R AD L
Sbjct: 60 DVDASLAPMLLQRLTMYKLRADVTIKETDLK----VRRGTGPAPLGALVDPRH--AD-LG 112
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+G
Sbjct: 113 WRLYG--ETGGDDGSDFDRIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVG 169
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDK 246
QEV +R++H+ +RK + + P GS I T + + GTL G + +A R+D+
Sbjct: 170 QEVTARMKHKTELRK-GLTLVAVHGAAPIGSEIFTPEGKAAGTLYTQSGGRGIAYLRLDR 228
Query: 247 VDHAIKKGMA 256
+ G A
Sbjct: 229 AAAGMTSGEA 238
>gi|163793647|ref|ZP_02187622.1| Glycine cleavage T protein (aminomethyl transferase) [alpha
proteobacterium BAL199]
gi|159181449|gb|EDP65964.1| Glycine cleavage T protein (aminomethyl transferase) [alpha
proteobacterium BAL199]
Length = 302
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 29/296 (9%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEED 63
+L ++ F+++ G + FLQ +++ DV + A A LT QGK L +F+++ + D
Sbjct: 8 FLQSRGFLRIDGPDRVAFLQGLVSNDVTKVTTDRAGYGAFLTAQGKFLFDFFMVA--DGD 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN-----------VIIEIQPINGVVLSWNQ--EHTF 110
+L+ + + D +L YKLRS V++ + + + L ++ F
Sbjct: 66 ALVLDTEGDRVDDFFKRLRMYKLRSKIELSQGGYRAAVVLGEEALAALGLPADRGVATPF 125
Query: 111 SNS-SFIDERFS--IADVLLHRTWGHN-----EKIASDIKTYHELRINHGIVDPNTDFLP 162
+++D R + A VLL + A+ ++ Y R+ G+ D + D
Sbjct: 126 GGGVAYVDPRHAEMGARVLLPASADDGVLSVAGPSAASLEPYDRQRVALGLADGSRDMAI 185
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+A + L G+ KGCY+GQE+ +R ++R ++++R + IT LP G+ I
Sbjct: 186 EKTVLLEAGFEELGGVDFDKGCYMGQELTARTKYRGLVKRRLLPITINGPLPAPGTLITL 245
Query: 223 DDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
D E G + V V LA+ R+++++ A + GM L V AS P W K
Sbjct: 246 DGREAGEVRSVIPNGDVNGTGLAMIRLNRLEEAFQAGMPLMAGESTVIASRPAWAK 301
>gi|224044548|ref|XP_002192875.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 320
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 130/297 (43%), Gaps = 31/297 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-------ILTPQGKILL- 53
++ + ++ + V G A FLQ ++T DV L +A G A L QG+ L
Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRL---LAEGDAPRALYAHALNAQGRCLYD 79
Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------INGVVLSWNQ 106
L S EE +LE D S DS+ L YK+R V I P + G S +
Sbjct: 80 VILYSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLPK 139
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDF 160
+ D R + L G N D++ YH R GI + D
Sbjct: 140 CADQALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQGIPEGVKDL 199
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PS 216
P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + ++ + LP P
Sbjct: 200 PPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLLPVSFPEPLPAAGLPE 259
Query: 217 GSPILT-DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ ILT GT G+ +A+ R+ + + + L H V++ A+ P W+
Sbjct: 260 GAEILTAAGKRAGTFRAGGGELGIALLRLAHLGEPLC--IPLGAHRVKLHAATPQWW 314
>gi|254512369|ref|ZP_05124436.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
gi|221536080|gb|EEE39068.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
Length = 245
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 130/256 (50%), Gaps = 20/256 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ N+ +++ GK FLQ +IT D+ L + +A+LTPQGK L F + K +
Sbjct: 1 MPNRRILRLTGKDTDSFLQGLITNDIERLADGLVY-AALLTPQGKYLADFFL-KRDGKGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFSIA 123
+L++D + D LI +L YKLR++V IE +N Q T + + D R S
Sbjct: 59 LLDVDEALADGLIKRLTMYKLRADVTIEATDLN------LQRGTGAAPEGALPDPRHS-- 110
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
D+ G E + D + +R+ I + + P + + ++ D LNG+ KG
Sbjct: 111 DLGWRAYSGAPE--SDDGSDWDAIRVRLCIPETGIELTPDS-YILESGFDALNGLDFKKG 167
Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
CY+GQEV +R++H+ +RK R + +TG+ P G+ IL+ +G L G +A+A
Sbjct: 168 CYVGQEVTARMKHKTELRKGLRVVEVTGS---APVGTEILSGGKPVGILFTQSGNRAIAY 224
Query: 242 ARIDKVDHAIKKGMAL 257
R D+ ++ G A+
Sbjct: 225 LRFDRAGGDMQAGDAV 240
>gi|195054166|ref|XP_001993997.1| GH18001 [Drosophila grimshawi]
gi|193895867|gb|EDV94733.1| GH18001 [Drosophila grimshawi]
Length = 354
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKILLYFLISKI 60
L + I+V G PFLQ ++T DV L P I S L G+++ +I +
Sbjct: 41 LPQRELIRVHGAEVTPFLQGLVTQDVSRLQEPSGPASIY--SLFLNRAGRLMFDTIIYRT 98
Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTF 110
++DT+++E DR L Y++R + I+I ++ + W + E
Sbjct: 99 NDKDTYLVECDRDASSDFRRHLRTYRVRKH--IDIDTVDDEYVPWVLFNDGQQKDTEARM 156
Query: 111 SNSS------FI--DERFS-----------IADVLLHRT-WGHNEKIA--SDI-KTYHEL 147
++S FI D R ++D L T W ++E IA DI K Y L
Sbjct: 157 ASSKQKAKDLFIASDPRIGSLGIRILAPSDMSDAQLATTLWRNHEVIAVNPDIEKNYKLL 216
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I
Sbjct: 217 RYKQGIGEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPI 276
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRV 264
T P S + + +LG V+G +A+ RI+ V + L + G R
Sbjct: 277 RFT---APIRSDMTVKSVSGASLGRVLGHAQNHGVALLRIEPV---LNSAQQLVLDGDRC 330
Query: 265 KASFPHWY 272
A PHW+
Sbjct: 331 FAERPHWW 338
>gi|157803675|ref|YP_001492224.1| glycine cleavage T-protein [Rickettsia canadensis str. McKiel]
gi|157784938|gb|ABV73439.1| Glycine cleavage T-protein [Rickettsia canadensis str. McKiel]
Length = 276
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 19/279 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ IK+ G ++ FLQ ++T D+ Y + +L +GK L F + +
Sbjct: 5 LSDREVIKIIGLDSVKFLQNLVTNDIKKSKYCY---TYLLNNKGKYLFDFFVYIHNFEEL 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERF---- 120
L+ID+S + +LID L FYK RS + II+ V+ S + + + D R+
Sbjct: 62 YLDIDKSNKATLIDHLNFYKFRSKIQIIDCHDKYKVIYSHQKLDIDTLVTSRDPRYTKLG 121
Query: 121 --SIADVLLHRTWG---HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
SI + L T H+ + + I Y E + N I+D D + P + L
Sbjct: 122 FRSIVNRTLKDTLDPLCHSREDKNPI--YLEDKYNFAIIDGVEDLSFNKSIPILYGGEEL 179
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVV 233
NGIS KGCY+GQEV+SR +++ IIR++ + +DL IL D+ IG +
Sbjct: 180 NGISYYKGCYVGQEVISRAKYQGIIRRKIYKVIADEDLSSLVKDEEILADNDTIGIICSS 239
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
KA+A+ R++K + K +++V G+ ++ S WY
Sbjct: 240 YHNKAIALIRVEK--YLAVKESSISVKGISIELSLAPWY 276
>gi|297717822|gb|ADI50054.1| folate-dependent protein [Candidatus Odyssella thessalonicensis
L13]
Length = 293
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S+ LS+++ ++V G FLQ +I+ DV L ++A + +L+PQG+ + LI +
Sbjct: 3 LSACLLSHRALVRVTGNDKATFLQGLISNDVNKLSPEVALFALLLSPQGRYQ-FDLILHL 61
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------- 107
E + ++LE+D ++ SLI +L ++LRSNV E+ ++ W +E
Sbjct: 62 EGEDWLLEVDAARALSLIKRLSVFRLRSNVTFEVVEDRAILAVWGEEVASCLSLEGGLGE 121
Query: 108 --HTFSNSSFIDERF-SIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157
T ++ +D R ++ L+ R+ E+I + Y R GI +
Sbjct: 122 TQATSWGTAVLDPRLIALGARLIIRS-EDVEQICHQYGIKLCSVSDYRYHRYQLGIPEGG 180
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
+ P + MD LN I KGCY+GQE+ +R ++R ++RKR P+ G
Sbjct: 181 EEIEVDRAIPLEWGMDELNAIDWNKGCYMGQELTARTRYRGLVRKRIFPVYAPGI----T 236
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
PIL + E+G LA+ R++ +D LT G + P W K
Sbjct: 237 LEQPILAAETEVGHWIAKEQDWGLAMVRLNAID------AQLTCDGQVLTIICPSWMK 288
>gi|254463496|ref|ZP_05076912.1| glycine cleavage system T protein, aminomethyltransferase
[Rhodobacterales bacterium HTCC2083]
gi|206680085|gb|EDZ44572.1| glycine cleavage system T protein, aminomethyltransferase
[Rhodobacteraceae bacterium HTCC2083]
Length = 247
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 37/261 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK-ILLYFLISKIEE 62
++ + ++V G A FLQ ++T DV L + +A+LTPQGK I +FL+ +
Sbjct: 2 IHPETRRLLRVTGADARAFLQGLLTNDVQKLDQGLVY-TAMLTPQGKYIADFFLVP--DG 58
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------NSSF 115
D +L+ D S+ D+L +L YKLR++V I + + + S +F
Sbjct: 59 DAILLDTDASQTDALAKRLTMYKLRADVTIA-----------DDKRSVSRGLGPIPEGAF 107
Query: 116 IDERFSIADVLLHRTW-GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+D R L W G++ +IA D+ + L + H + + P + F + +
Sbjct: 108 VDPR------LAALGWRGYDGQIAQDVD-WTALNVTHSVPRAGIELTPDS-FLLEMGFER 159
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTD-DIEIGTLG 231
LNG+ KGCY+GQEV +R++H+ +RK + ITG+ P G+ I T+ D GTL
Sbjct: 160 LNGVDFKKGCYVGQEVTARMKHKTQLRKGLAQVSITGS---APIGTDITTEADKVAGTLF 216
Query: 232 VVVGKKALAIARIDKVDHAIK 252
G KALA R D+ +K
Sbjct: 217 SQSGDKALAYVRFDRATGPLK 237
>gi|330994708|ref|ZP_08318631.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp.
SXCC-1]
gi|329758349|gb|EGG74870.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp.
SXCC-1]
Length = 275
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 12/273 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62
+L +++ + V G + FLQ +++ D+ T+ A +A L+ QGK L +F+++ E
Sbjct: 5 AHLPDRAVLAVSGADRVSFLQGLVSNDMTTVAPGHAVWTAFLSAQGKWLADFFVLADPEG 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+++ DR++ D L +L Y+LR+ V I + V +W T +
Sbjct: 65 VRLLVDCDRAQADMLRQRLSRYRLRAQVEIG-ETGYAVHAAWGSGFTPPAGYPAAPDPRL 123
Query: 123 ADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
D GH AS D Y R+ G+ D D +A D LNGIS T
Sbjct: 124 PDAGWRVLLGHPAPDASADDVDYDRHRLALGLPDGARDCESDRTLLLEANFDQLNGISWT 183
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQE+ +R ++R ++R+ + + +LP G+P+++ D +G + +A+
Sbjct: 184 KGCYMGQELTARTRYRGLVRRHLLPVMAGRELPTPGTPVMSGDTAVGEMRSSRDSAGMAM 243
Query: 242 ARIDKVDHA--IKKGMALTVHGVRVKASFPHWY 272
R + + + G AL V P W+
Sbjct: 244 IRNEHIHDTDLVAGGHALHVR-------VPQWF 269
>gi|83950541|ref|ZP_00959274.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
gi|83838440|gb|EAP77736.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
Length = 243
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 27/253 (10%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTFILEID 70
I + GK A FLQ ++T D+ L + +A+LTPQGK + +FL+++ E T L+ D
Sbjct: 6 IDISGKDARSFLQGLVTNDLGKLDQGLVY-AALLTPQGKYMADFFLLARGE--TIHLDAD 62
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD----VL 126
S D L+ +L Y+LR++V + + S + ++AD L
Sbjct: 63 ASLGDMLMQRLAMYRLRADVQLSESALK-----------LSRGTGPAPEGALADPRHPAL 111
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
R +G + D + +R+ H I + ++ P T + +A + LNG+ KGCY+
Sbjct: 112 GWRLYGAQD--GEDGSDFDAIRVAHCIPETGSELGPET-YILEAGFERLNGVDFRKGCYV 168
Query: 187 GQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
GQEV +R++H+ +RK R + I G P G+ I + +GTL G +A+A R
Sbjct: 169 GQEVTARMKHKTELRKGFRTVEIEGA---APLGTEITAEGKPVGTLHTQAGSQAIAYLRF 225
Query: 245 DKVDHAIKKGMAL 257
D+ ++ G A+
Sbjct: 226 DRARGDMQAGDAI 238
>gi|301787921|ref|XP_002929380.1| PREDICTED: putative transferase C1orf69, mitochondrial-like,
partial [Ailuropoda melanoleuca]
Length = 319
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGK---- 50
L ++ ++V G ++PFL ++T + LP + A+ +P QG+
Sbjct: 15 LGERALVRVRGPDSVPFLLGLLTNE---LPLPASAAGAVSSPALAGYAHFLNVQGRTLYD 71
Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHT 109
+LLY L E F+LE DR+ +L L YK+R V +E +P + L
Sbjct: 72 VLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPEE 131
Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153
++ + E+ A +L R +E +A D++ YH R HG+
Sbjct: 132 GGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHGV 191
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + L
Sbjct: 192 PEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGPL 251
Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P G+ +LT+ + G G LA+ R +K+ + + + + + AS
Sbjct: 252 PAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTSESGQ-LALTASV 310
Query: 269 PHWY 272
P W+
Sbjct: 311 PDWW 314
>gi|281340181|gb|EFB15765.1| hypothetical protein PANDA_019539 [Ailuropoda melanoleuca]
Length = 317
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGK---- 50
L ++ ++V G ++PFL ++T + LP + A+ +P QG+
Sbjct: 13 LGERALVRVRGPDSVPFLLGLLTNE---LPLPASAAGAVSSPALAGYAHFLNVQGRTLYD 69
Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHT 109
+LLY L E F+LE DR+ +L L YK+R V +E +P + L
Sbjct: 70 VLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPEE 129
Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153
++ + E+ A +L R +E +A D++ YH R HG+
Sbjct: 130 GGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHGV 189
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + L
Sbjct: 190 PEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGPL 249
Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P G+ +LT+ + G G LA+ R +K+ + + + + + AS
Sbjct: 250 PAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTSESGQ-LALTASV 308
Query: 269 PHWY 272
P W+
Sbjct: 309 PDWW 312
>gi|254476830|ref|ZP_05090216.1| aminomethyl transferase family protein [Ruegeria sp. R11]
gi|214031073|gb|EEB71908.1| aminomethyl transferase family protein [Ruegeria sp. R11]
Length = 246
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 25/257 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
++ + +++ G A FLQ +IT DV K+ +G +A+LTPQGK L F + E
Sbjct: 1 MTTRRILRLTGSDARDFLQGLITNDVA----KVDQGLVYAALLTPQGKYLADFFVF-AEG 55
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDER 119
D ++++D S SL +L Y+LR++V I ++Q G + + +D R
Sbjct: 56 DDLLIDVDESLAASLAKRLSMYRLRADVQISDTDLQVKRGTGPA-------PEGALMDPR 108
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
D L R +G + D + +R+ H I + P + + +A + LNG+
Sbjct: 109 H---DALGWRLYG--TEGGDDGSNWDAIRVAHCIPQTGIELGPDS-YILEAGFERLNGVD 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK ++ PSGS I + +GTL G +
Sbjct: 163 FRKGCYVGQEVTARMKHKTELRK-GLVTVAVSGSAPSGSEIRRAEKPVGTLFTTEGAHGI 221
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ ++ G A
Sbjct: 222 AYLRYDRAGDDMQAGEA 238
>gi|157825884|ref|YP_001493604.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford]
gi|157799842|gb|ABV75096.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford]
Length = 308
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 47/309 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT D+ Y + +LT QG+ L F + +
Sbjct: 5 LSNREIIKIIGLDSVKFLQNLITNDIKKSQYCY---TYLLTNQGRYLFDFFVYVRNLEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122
L+ID+S + +LI+ L FYKLRS + II+ V+ S + + + D R+S+
Sbjct: 62 YLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLG 121
Query: 123 ------ADVLLHRTWGHNEKIASD-------------------------------IKTYH 145
V+ +G + I D Y
Sbjct: 122 FRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLYL 181
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++
Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241
Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
IT +DL IL +IG + KA+ + R +K + K +TV G++
Sbjct: 242 KITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEK--YFACKEADITVKGIK 299
Query: 264 VKASFPHWY 272
+ S WY
Sbjct: 300 INLSLAPWY 308
>gi|163737689|ref|ZP_02145106.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter
gallaeciensis BS107]
gi|161389215|gb|EDQ13567.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter
gallaeciensis BS107]
Length = 246
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 19/245 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
+SN+ +++ G FLQ +IT DV K+ +G +A+LTPQGK L F ++ E
Sbjct: 1 MSNRRILRLSGDDTRDFLQGLITNDVT----KVDQGLVYAAMLTPQGKYLADFFVA-AEG 55
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D ++++D S SL +L Y+LR+ V IE + + D R
Sbjct: 56 DDLLVDVDESLAPSLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD 111
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L R +G + D ++ +R+ H I + + P + + +A + LNG+ K
Sbjct: 112 ---LGWRMYGA--QPGDDGSDWNAIRVAHCIPETGIELGPDS-YILEAGFERLNGVDFRK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQEV +R++H+ +RK +T + P G+ I D +GTL G +A+A
Sbjct: 166 GCYVGQEVTARMKHKTTLRKGLATVT-VEGEAPIGTEIRRADKPVGTLFTQAGDQAIAYL 224
Query: 243 RIDKV 247
R D+
Sbjct: 225 RFDRA 229
>gi|195144438|ref|XP_002013203.1| GL23521 [Drosophila persimilis]
gi|194102146|gb|EDW24189.1| GL23521 [Drosophila persimilis]
Length = 340
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62
L+++ I+V G +PFLQ ++T DV L S L G++L ++ + E
Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYAMFLNKGGRVLYDTIVYRTES 95
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
DT++LE DR + L +++R I++ I+ + W +T + E+
Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYVPWVLFNTEKCGEQVGEKLQ 153
Query: 122 ----------------------IADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDP 156
+A + E I S + Y LR G+ +
Sbjct: 154 RNKEWELFISSDPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSERNYQLLRYKQGVGEG 213
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T P
Sbjct: 214 SEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT---APL 270
Query: 217 GSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ I LG V G +A+ RI++V + L V G R A P W+
Sbjct: 271 GANQTVQSIAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELVVDGERCFAERPDWW 326
>gi|58040450|ref|YP_192414.1| aminomethyltransferase [Gluconobacter oxydans 621H]
gi|58002864|gb|AAW61758.1| Aminomethyltransferase [Gluconobacter oxydans 621H]
Length = 281
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 25/277 (9%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
YLS+++ + G FLQ +IT DV L A SA+LTPQG+ L F + D
Sbjct: 15 YLSHRAVLSFTGTDRASFLQGLITNDVQNLTDTTAVWSALLTPQGRWLSEFFLYATP-DR 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFIDERFS 121
+++ + L+ +L ++LR++V IE P V++ + + S +D R
Sbjct: 74 ILMDCPADHAEMLVKRLSRFRLRADVQIENTPFQ--VITGAEGRAVPETVLTSALDPRCE 131
Query: 122 IAD---VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
V+ G A + E R+ G+ D DF +A MDLL+G+
Sbjct: 132 GTGWRAVVTEPAQGGETPAA-----FLERRLTLGLPD-VMDFESEQTLALEADMDLLHGV 185
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG 235
S KGCY+GQE+ +R +R ++++R P++++ GT P G I++ + E+G + G
Sbjct: 186 SWKKGCYMGQELTARTHYRGLVKRRLLPVVLSEGT--FPNEGGVIVSGEREVGDIRSRSG 243
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ALA+ R D + LT +G + +P W+
Sbjct: 244 NRALAMLRRDAWSAS-----DLTCNGQPLSVVWPVWF 275
>gi|254439032|ref|ZP_05052526.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
gi|198254478|gb|EDY78792.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
Length = 247
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 21/255 (8%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDT 64
N++ I++ G + FLQ +IT DV K + G +A+LTPQGK + F ++ ++
Sbjct: 3 NRTLIRLSGPDTVEFLQGLITNDVA----KTSGGLVYAALLTPQGKYIADFFVTA-QDGA 57
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++++ S L +L Y+LRS+V I P+ L T NS+ D R +
Sbjct: 58 LLIDVATSHAAMLAQRLTMYRLRSDVQIAEAPL----LVSRGTGTAPNSALPDPRHA--- 110
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R ++ SD + LR+ H I + + P T + +A + LNG+ KGC
Sbjct: 111 ALGWRLIAATDQ--SDDTDWDALRVAHVIPETGIELTPET-YILEAGFERLNGVDFRKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVVGKKALAI 241
Y+GQE+ +R++H+ ++K ++ + P P G+ I T+ GTL G ALA
Sbjct: 168 YVGQEIAARMKHKTELKKGLAQVSISGVAPAKFPMGTEITTNGRPAGTLYTQSGGLALAH 227
Query: 242 ARIDKVDHAIKKGMA 256
R D+ ++ G A
Sbjct: 228 LRFDRATGDMQAGGA 242
>gi|51473652|ref|YP_067409.1| hypothetical protein RT0451 [Rickettsia typhi str. Wilmington]
gi|51459964|gb|AAU03927.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 286
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 25/287 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT D+ Y + +L QG+ L F + ++
Sbjct: 5 LSNRKIIKIIGLDSLMFLQKLITNDICNKRYCY---TYLLNNQGRYLFDFFVYVHHKEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERF---- 120
++ID+S + +LI L FYKLRS + II+ V+ S + + D R+
Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHQKLDIDMLITVRDPRYAKLG 121
Query: 121 --SIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNTDFLPSTIFP 167
SI + + +N K I + Y E + N I+D D + + P
Sbjct: 122 FRSINKLDIITCTSNNVKDMESISSITSYRQSMNPIYLEDKYNFAIIDGIEDLITNKSIP 181
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDI 225
+ + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL ++
Sbjct: 182 NMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKIYRITAYEDLLSLVQDDVILANNE 241
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+IG + K +A+ ++K H K +TV G+++ S WY
Sbjct: 242 KIGVICSSYQNKGIALI-MEKKYHDY-KTYNITVKGIKINLSLAPWY 286
>gi|262277435|ref|ZP_06055228.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114]
gi|262224538|gb|EEY74997.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114]
Length = 273
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 11/270 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ N+ I + G + FL IIT DV + + S +L+PQGK++ +F ISKI ++ F
Sbjct: 9 IENKRVISITGDESETFLNNIITNDVKKINSNNSIYSCLLSPQGKVISHFFISKI-DNKF 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIAD 124
++ +D D LI+KL FYKLRS V I+ + + V+ + ++ F++ F D R I +
Sbjct: 68 LIIVDDYLSDDLIEKLNFYKLRSQVDIKDENLYNVIFTTDENFKFNSILDFEDPR--IPN 125
Query: 125 VLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ N+ + D + Y++L +G++D + + F + M LN I +
Sbjct: 126 FGKYFISKKNDNLGINLEDSEKYYKLINLNGLIDSIFNQIQGQYFSLELNMQELNAIDFS 185
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQE +R+ + I K+ + L SG I + IG +V A+
Sbjct: 186 KGCYVGQENTARMSLKEKISKKLFRLNSESKL-SSGEEIFFNKEIIGK--IVSENPNFAM 242
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
++ K + K + T ++VK S P+W
Sbjct: 243 IKMLKFNEFNDKDLK-TQDDIKVKISKPNW 271
>gi|241068687|ref|XP_002408509.1| glycine cleavage T protein, putative [Ixodes scapularis]
gi|215492497|gb|EEC02138.1| glycine cleavage T protein, putative [Ixodes scapularis]
Length = 256
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 9/244 (3%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT + Y + +L QG+ L F + +
Sbjct: 10 LSNREVIKIIGLDSVKFLQNLITNYIKKNNYCY---TYLLNNQGRYLFDFFVYVPNLEEI 66
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++
Sbjct: 67 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTM-- 124
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R+ + + + K Y E + N I+D D + P+ + LN IS KGC
Sbjct: 125 -LGFRSIYDGDPASFNEKLYLEDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGC 183
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIA 242
Y+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+A+
Sbjct: 184 YVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALI 243
Query: 243 RIDK 246
R +K
Sbjct: 244 REEK 247
>gi|126739975|ref|ZP_01755665.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
gi|126718794|gb|EBA15506.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
Length = 246
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 13/242 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ +IT DV L + + +A+LTPQGK + F ++ E
Sbjct: 1 MTARKILRLSGPDTRSFLQGLITNDVNKLDHGLVY-AALLTPQGKYIADFFLAPAGE-AV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++D S + L +L Y+LR+ V IE + V E + D R S
Sbjct: 59 LLDVDESLAEGLAKRLSMYRLRAAVEIETTDLQ--VKRGTGEA--PEGALSDPRHSAMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L+ G + D ++ +R+ H I + + + P + + +A + LNG+ KGCY
Sbjct: 115 RLYGDEGGD-----DGSNWNAIRVAHCIPETSIELGPDS-YILEAGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + T + PSGS I D +GTL +A+A R D
Sbjct: 169 VGQEVTARMKHKTELRKGLVTVKVTGE-APSGSEIKRQDKAVGTLFTSADGQAIAYLRYD 227
Query: 246 KV 247
+
Sbjct: 228 RA 229
>gi|195390113|ref|XP_002053713.1| GJ23197 [Drosophila virilis]
gi|194151799|gb|EDW67233.1| GJ23197 [Drosophila virilis]
Length = 344
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 37/298 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS--AILTPQGKILLY--FLISKIE 61
L + I+V G +PFLQ ++T DV L S A+ +G L+Y + +
Sbjct: 39 LRQRELIRVHGAEVVPFLQGLVTNDVSRLQEANGPSSMYALFLNRGGRLMYDTIIYRTND 98
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFID- 117
DTF+LE DR L Y++R + I+ + + V+ + N +D
Sbjct: 99 PDTFLLECDRDASSDFRRHLRMYRVRKRIDIDTVDDEYVPWVIFNENGRGDIRTHKAMDL 158
Query: 118 -------------ERFSIADV----LLHRTWGHNEKIA---SDIKTYHELRINHGIVDPN 157
+ AD+ L W +++ +A + Y LR GI +
Sbjct: 159 FIAPDPRVGSMGTRVLAPADLNSTKLSKDLWRNHDVVAINPTPDSNYKLLRYKQGIGEGI 218
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T P
Sbjct: 219 EELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFT---APVS 275
Query: 218 SPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
S + LG V G +A+ RI+ V H ++ L + G R PHW+
Sbjct: 276 SNQTVKSVAGANLGRVFGHAHNHGVALLRIEPVLHGDQQ---LVLDGERCFVDRPHWW 330
>gi|195112764|ref|XP_002000942.1| GI10516 [Drosophila mojavensis]
gi|193917536|gb|EDW16403.1| GI10516 [Drosophila mojavensis]
Length = 344
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 125/300 (41%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLY--FLISKIE 61
L + I+V G +PFLQ ++T DV L P + A+ +G LLY + +
Sbjct: 39 LHQRELIRVHGAEVVPFLQGLVTNDVSRLQEPSGPSSMYALFLNRGGRLLYDTIIYRTND 98
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSN 112
DTF+LE DR L Y++R I+I I+ + W N +
Sbjct: 99 PDTFLLECDRDASSDFRRHLRTYRVRKR--IDIDTIDDEYVPWVLFNGKGRGNIRTHKAM 156
Query: 113 SSFI--DERFSI------------ADVLLHRTWGHNEKIASDI---KTYHELRINHGIVD 155
FI D R I A L W H++ +A + Y LR GI +
Sbjct: 157 DLFIAPDPRIGIMGTRVLAPGDINATKLTKDLWCHHDVVAVNSTPENNYKLLRYKQGIGE 216
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T P
Sbjct: 217 GVEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFT---AP 273
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ + LG V G +A+ R++ V + L + G R P W+
Sbjct: 274 VSNHFTVKSVAGANLGRVFGHAHNHGVALLRVEPV---LNSEQQLMLDGERCYVDRPSWW 330
>gi|114769319|ref|ZP_01446945.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
gi|114550236|gb|EAU53117.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
Length = 253
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 17/263 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + N+S +KV G + FLQ +IT DV ++ +A+L+P+GK L F I+
Sbjct: 1 MCPEIIKNRSILKVSGNDSENFLQGLITNDVSRAKTELIY-TALLSPKGKYLFDFFITS- 58
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFID 117
D ++++I + I +L YKLR++V IE I G+ S +F D
Sbjct: 59 HSDGYLIDISSNNAYQFIQRLNLYKLRADVTIEQTDIKVGRGI-------GPISEQAFQD 111
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R +D L +R + + S I + ++R+ + I + + + + +A + L+G
Sbjct: 112 PR---SDQLGYRIYNPTQTEDSSI-NWDQIRVENCIPETGIELIIDETYILEANFEKLSG 167
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ + K+ + D P G+ I+++D +G +
Sbjct: 168 VDFRKGCYVGQEVTARMKHK-VELKKGFVKVQIDGSAPIGTDIISNDKVVGQIFTQSNGM 226
Query: 238 ALAIARIDKVDHAIKKGMALTVH 260
A+A R ++V + +K G A ++
Sbjct: 227 AIAYLRFNRVSNDMKAGTAKIIY 249
>gi|125775558|ref|XP_001358983.1| GA20785 [Drosophila pseudoobscura pseudoobscura]
gi|54638724|gb|EAL28126.1| GA20785 [Drosophila pseudoobscura pseudoobscura]
Length = 340
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS---AILTPQGKILLYFLISKIEE 62
L+++ I+V G +PFLQ ++T DV L S L G++L ++ + E
Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYALFLNKGGRVLYDTIVYRTES 95
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSN-------------VIIEIQPIN---GVVLSWN 105
DT++LE DR + L +++R V+ Q G L N
Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRKIDVDSIDDEYAPWVLFNTQKCGEKVGEKLQRN 155
Query: 106 QEHTFSNSSFIDERFS------IADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDP 156
+E + SS D R +A + E I S Y LR G+ +
Sbjct: 156 KERKWFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSENNYQLLRYKQGVGEG 213
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T P
Sbjct: 214 SEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT---APL 270
Query: 217 GSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ + LG V G +A+ RI++V + L V G R A P W+
Sbjct: 271 GANQTVQSLAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELMVDGERCFAERPDWW 326
>gi|15604328|ref|NP_220844.1| hypothetical protein RP464 [Rickettsia prowazekii str. Madrid E]
gi|3861020|emb|CAA14920.1| unknown [Rickettsia prowazekii]
gi|292572080|gb|ADE29995.1| Putative aminomethyltransferase GcvT-like protein [Rickettsia
prowazekii Rp22]
Length = 285
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 24/286 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N+ IK+ G ++ FLQ +IT D+ Y + +L QG+ L F + +++
Sbjct: 5 LINREIIKIIGLDSLIFLQKLITNDICKKRYCY---TYLLNNQGRYLFDFFVYVHKKEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123
++ID+S + +LI L FYKLRS + II+ V+ S + + D R++
Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHKKLDIDMLITVRDPRYTKLG 121
Query: 124 -------DVLLHRTWGHNEKIASDIKTYH--------ELRINHGIVDPNTDFLPSTIFPH 168
D+ N + S I +Y E + N I+D D + P+
Sbjct: 122 FRSINKLDITCSSDNMANMESISSITSYCQSMNPIYLEDKYNFAIIDGIEDLITDKSIPN 181
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIE 226
+ LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL D+ +
Sbjct: 182 MYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKVYRITANEDLLSLVQDDVILADNEK 241
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
IG + K +A+ ++K H K +TV G+++ S WY
Sbjct: 242 IGVICSSYQNKGIALI-MEKKYHDY-KTYNITVKGIKINLSLAPWY 285
>gi|330814289|ref|YP_004358528.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Pelagibacter sp. IMCC9063]
gi|327487384|gb|AEA81789.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Pelagibacter sp. IMCC9063]
Length = 298
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 40/299 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+++L ++ I + G +PFLQ+II+ D+ + K + S +LTPQGK L F+I+K
Sbjct: 6 AIHLEQKTVISINGSDVVPFLQSIISNDIQLVDEKTSIYSCLLTPQGKFLYDFIITKKSS 65
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D ++L+ ++ D I KL YKLRS + I V L +N + S F +I
Sbjct: 66 DHYLLQCNKLIVDDFIAKLTVYKLRSQIQISKVDQEYVSLFFNMANEIIASKF----NTI 121
Query: 123 ADVLLHRTWGH--NEKIASDIKTY------------HELRINH-------------GIVD 155
+ +G N+ +D+ + EL +N G+VD
Sbjct: 122 QGFTIQNQYGFFFNDPRLADLGVHGIILKDKFDDLVKELNVNLLPLDTYVKICHQVGLVD 181
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTDD 212
+ S F + + LNG+S KGC++GQE +R+ +N IRKR II G+ +
Sbjct: 182 LVPELALSNYFSLELNLKELNGVSFKKGCFVGQENTARMNLKNKIRKRVFPIQIIQGSVE 241
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ G PI ++ IG + + + I ++ H + + ++L +++ P+W
Sbjct: 242 I---GQPIKDNEKTIGKI-ISLDPACFGILDAEESKHLLDQTISLEQSSIKILK--PYW 294
>gi|91205503|ref|YP_537858.1| glycine cleavage T-protein [Rickettsia bellii RML369-C]
gi|157827218|ref|YP_001496282.1| glycine cleavage T-protein [Rickettsia bellii OSU 85-389]
gi|91069047|gb|ABE04769.1| Glycine cleavage T-protein [Rickettsia bellii RML369-C]
gi|157802522|gb|ABV79245.1| Glycine cleavage T-protein [Rickettsia bellii OSU 85-389]
Length = 273
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+ IK+ G ++ FLQ + T D+ Y + +L QG+ L F + +
Sbjct: 5 LNNREVIKIAGSDSLKFLQNLTTNDINKSNYCY---TYLLNNQGRYLFDFFVYVHNIEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++ID + +LID L FYK RS + I + ++QE + S + R ++
Sbjct: 62 YIDIDEKSKTALIDHLNFYKFRSKIEIVDCKDEYKIAYFHQE--LNMDSLVTARDPRYNL 119
Query: 126 LLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L R+ ++ S I K Y + + N I+D D + P ++ L G+S
Sbjct: 120 LGFRSITLSQSCHSRIGGNLSKKLYLDDKYNFAIIDGVDDLIVGKSIPTLYGIEELKGVS 179
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK 237
KGCY+GQEV+SR +++ +IR++ I +DL IL + IG + K
Sbjct: 180 YDKGCYVGQEVISRAKYQGVIRRKIYKIIAEEDLSSLIKDEEILAGNDSIGIICSSYQNK 239
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+A+ + +K + K + V GV+V S WY
Sbjct: 240 AIALVKEEK--YLASKEEDINVGGVKVDLSLAPWY 272
>gi|163740727|ref|ZP_02148120.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
gi|161385718|gb|EDQ10094.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
Length = 246
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 19/245 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
+SN+ +++ G FLQ +IT DV K+ +G +A+LTPQGK L F ++ E
Sbjct: 1 MSNRRILRLSGADTRDFLQGLITNDVT----KVDQGLVYAAMLTPQGKYLADFFVA-AEG 55
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D ++++D S SL +L Y+LR+ V IE + + D R
Sbjct: 56 DDLLVDVDESLAASLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD 111
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L R +G + D ++ +R+ H I + + P + + +A + LNG+ K
Sbjct: 112 ---LGWRMYGA--QPGDDGSDWNAIRVAHCIPETGIELGPDS-YILEAGFERLNGVDFRK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQEV +R++H+ +RK +T + G+ I D +GTL G +A+A
Sbjct: 166 GCYVGQEVTARMKHKTTLRKGLATVT-VEGEAAIGTEIRRADKPVGTLFTQAGDQAIAYL 224
Query: 243 RIDKV 247
R D+
Sbjct: 225 RFDRA 229
>gi|326429004|gb|EGD74574.1| hypothetical protein PTSG_05939 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++S ++V G FLQ ++T DV+ + K R S +L P+G++L+ + +I + F L
Sbjct: 77 SRSVLQVDGADGAEFLQGMLTNDVVEMEDKDVRFSMLLNPKGRVLVDAFVHRISPERFYL 136
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFSI---- 122
++ R S+ D ++LRS V E + ++ V S + NS + F +
Sbjct: 137 DLPRPLIRSVADYFTRFRLRSQV--EFRDVSDTVDSVVGMNVDENSLKQLTANFDVLNFQ 194
Query: 123 ADVLLHRT-------W-----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
D +H+T W ++ A D TY +LRI+ G + D P
Sbjct: 195 PDPRIHQTEPYCRSLWRGVCTRPSTDSDSDDNAAHDEHTYQQLRISMGFGEGPVDHQPKK 254
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPPSGSPILT 222
P +D L+G+S TKGCYIGQE+ +R H + RKR M IT + P I T
Sbjct: 255 SLPLQCNLDYLHGVSWTKGCYIGQELTARTHHMGMTRKRLMPITLHAPTTVAPGSKVINT 314
Query: 223 DDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+ + +G + G ALA+ R++ KG L V
Sbjct: 315 ETGKAVGDVRSQAGVHALAMIRLEPA-----KGAQLAV 347
>gi|85707165|ref|ZP_01038252.1| aminomethyl transferase family protein [Roseovarius sp. 217]
gi|85668324|gb|EAQ23198.1| aminomethyl transferase family protein [Roseovarius sp. 217]
Length = 270
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ +++ GK A+ FLQ ++T D+ L + +AILTPQGK L FL+S+ D L
Sbjct: 24 TRRILQITGKDALHFLQGLVTNDLNKLDQGLVY-AAILTPQGKYLADFLLSR-HGDAIRL 81
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++D S L+ +L YKLR++V + +++ + G E ++ D
Sbjct: 82 DVDDSLAPMLLQRLTLYKLRADVTLTQTDLKVLRGT--GPAPEGALTDPRHPD------- 132
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R +G E D + +R+ H I + + P T F +A + LNG+ KGC
Sbjct: 133 -LGWRLYGDAE--GDDGSDFERIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGC 188
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIAR 243
Y+GQEV +R++H+ +RK + + P GS I T + + GTL G + +A R
Sbjct: 189 YVGQEVTARMKHKTELRK-GLTMVAVHGTAPIGSEIRTPEGKPAGTLYTQSGGRGIAYLR 247
Query: 244 IDKVDHAIKKGMA 256
D+ + G A
Sbjct: 248 HDRAAAGMIAGEA 260
>gi|221116643|ref|XP_002154366.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 560
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLIS 58
++ VY ++ + V GK LQ +IT DV L + S +L QG+IL +
Sbjct: 287 IACVY--DEKWFLVHGKDCKKLLQGMITNDVSLLDNNLVNCIYSMVLNVQGRILYDLFLH 344
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
K E +++E + +D L+ L YKLRS V E + V +S++ + + +D
Sbjct: 345 K-HEHGYLMECNSCFKDELVSYLNRYKLRSKVFFENRDDLNVYVSFSSD--MFDHFVVDP 401
Query: 119 RFSIADVLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
R L +R + + +D I Y LR GI + + + H+ + LL
Sbjct: 402 RLP---KLGYRNLSTKKIVKNDFGDISCYTNLRYQLGISE-GVEVINGIPLEHN--LALL 455
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
NG+S TKGCYIGQE+V+R H ++RKR P++++ L + + D ++G L +
Sbjct: 456 NGVSFTKGCYIGQELVARAHHTGVVRKRVVPLLLSREHCLLDGNTVCMEGDFQVGKLLGI 515
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GK A+ + R+ ++ K + + + VKA P W+
Sbjct: 516 SGKNAIGLLRLKEI-FDDKNKLHIKDSDISVKAFKPDWW 553
>gi|296230768|ref|XP_002760882.1| PREDICTED: putative transferase C1orf69, mitochondrial-like
[Callithrix jacchus]
Length = 357
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA-ILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ P G A L QG+ ++L
Sbjct: 53 LDERALLRVRGPDAAPFLLGLLTNELPLPGPAAGDAPPPPRAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
Y L +EE F+LE D S + +L L Y++R V +E P V +
Sbjct: 113 YGLREHLEEMSGFLLECDSSVQGALQKHLALYRIRRKVTVEQHPDLRVWAVLPRSPEAFG 172
Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156
++ + ER +L+ R NE A D+ YH+ R G+ +
Sbjct: 173 AAPLQERAGTDAILIRDPRTPSMGWRLLTQNEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H IIRKR + D LP S
Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGIIRKRLFPVRLLDPLPTS 292
Query: 217 G-SP---ILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G SP +LT+ + +G G LA+ R +K+ + + V + AS P W
Sbjct: 293 GISPGAEVLTESGQTVGKYRAGQGNVGLALLRSEKIKGPLHIRASKGAQ-VALAASVPDW 351
Query: 272 Y 272
+
Sbjct: 352 W 352
>gi|114798165|ref|YP_759588.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444]
gi|114738339|gb|ABI76464.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 271
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 13/266 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ + + G I L+ +T V AR A+LTPQGKI+ ++ +I D
Sbjct: 4 LPDRAILSLTGPDTIALLERTVTHTVAGWAEGEARYGALLTPQGKIIADYIAHRIA-DGV 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ D L+ +L ++LRS V EI +V S D R
Sbjct: 63 LIDVHEDAADDLMKRLKMFRLRSAV--EIMRDEALV------SAIDVSGVPDPRTP---K 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L HR+ A + + L I+ G+ + D+ + +FP D MD++ GI KGC+
Sbjct: 112 LPHRSIVPAGDAAEPLPGWDALAISAGVPEWGRDYRAAEVFPTDINMDVMTGIDYRKGCF 171
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV SR++ + +IRKR + + G + L +GT+ +ALA+ R D
Sbjct: 172 VGQEVASRMKRKGLIRKRTVRLKG-EGLVVGAELRAGTAGSLGTVTSAAAGEALALIRTD 230
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271
+ AI+ +TV+ + W
Sbjct: 231 RFAKAIQDKQPVTVNDAPAEIDGAPW 256
>gi|198424567|ref|XP_002123278.1| PREDICTED: similar to CG8043 CG8043-PA [Ciona intestinalis]
Length = 329
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 37/288 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++++ +++ GK I LQ ++T DV LP + +L QG+I + LI +
Sbjct: 37 LNHRAVVQLGGKDTIEHLQGLVTNDVTLLPSSKCMYAMMLNTQGRID-HNLILHWNDGEV 95
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQ----------EHTFSNS- 113
+++ D S+ D + L YKLR V I+E +N + SWN+ H +N
Sbjct: 96 LIDCDESRADIFMKLLKRYKLRKKVEILERNDLN-IWQSWNESCSNVMPDVKHHVCANPD 154
Query: 114 ---SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
+ R D ++ + + K YH R G+ + + D P P ++
Sbjct: 155 PRVKLMGWRVVSCDQPC------DDVMMTSSKDYHIWRYKVGVPETDIDLPPGKSLPLES 208
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM-IITGTDDLPPSGSPILTDDIE- 226
+D ++GI+ KGCY+GQE+ +R H ++RKR P+ I+ G +P G+ + +++ +
Sbjct: 209 NLDFMHGINFHKGCYLGQELTARTHHTGVVRKRLIPVEILEGK--VPEPGTSLRSENNKS 266
Query: 227 IGTL-GVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
G L GVV GK LA+ ++D +G LT G ++K P W+
Sbjct: 267 AGRLRGVVGGKHGLALIKLD------YEGQILTTSGGTKLKGQRPLWW 308
>gi|58584606|ref|YP_198179.1| aminomethyltransferase related to GcvT [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418922|gb|AAW70937.1| Predicted aminomethyltransferase related to GcvT [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 265
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ I + G FLQ +IT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MGYIPLPSRGVIVLYGPDTRDFLQGVITNDINKLNSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----VLSWNQEHTFSNSS-- 114
+ +LE + +I+KL L++ + ++I+ I+ + +L + SN S
Sbjct: 61 GK-CILLECENMYLQQIIEKLDL--LKTYLRVKIKDISALYKVGILFDTKSTECSNESQV 117
Query: 115 -FIDERFSIADVLLHRTWGHNE--KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
F D R + ++ R NE ++ D Y +RI + + D D + + FP L
Sbjct: 118 IFQDPRHKLLEM---RIIHKNEIKELVGDFAQYERVRIQNLVPDGAKDMVQNLSFPLQYL 174
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTL 230
+D +NGIS KGCYIGQEVVSR+ + I RK+ ++ G + LP G+ + + + E+G L
Sbjct: 175 IDKINGISFNKGCYIGQEVVSRMSRQEIFRKKLYLVEGDNALPNIGTKVTNENNEEVGEL 234
Query: 231 GVVVGKKALAIARIDK 246
+ LA+ K
Sbjct: 235 RSSIDNIGLALLNTGK 250
>gi|260433135|ref|ZP_05787106.1| aminomethyl transferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416963|gb|EEX10222.1| aminomethyl transferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 245
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S + +++ G FLQ +IT D+ L + +A+LTPQGK + F + K + +
Sbjct: 1 MSTRRIVRLTGADTDSFLQGLITNDIRKLDDGLVY-AALLTPQGKYIADFFL-KRDGNGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ D+LI +L YKLRS V I+ ++ +H + +
Sbjct: 59 LLDVAEDLADTLIKRLGMYKLRSEVSIDETDLH-------LQHGTGPAPQGAQPDPRHPD 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ R + + D + +R+ H I + + P T + +A + LNG+ KGCY
Sbjct: 112 MGWRAYSPAPET-DDGTDWDAIRVRHCIPESGIELTPET-YILEAGFERLNGVDFKKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + G + P G+ I++DD GTL G KA+A R+D
Sbjct: 170 VGQEVTARMKHKTQLRK-GLQVVGIEGAAPVGTQIMSDDKPAGTLFTQSGGKAIAHLRLD 228
Query: 246 KV 247
+
Sbjct: 229 RA 230
>gi|304320079|ref|YP_003853722.1| glycine cleavage system T protein, aminomethyltransferase
[Parvularcula bermudensis HTCC2503]
gi|303298982|gb|ADM08581.1| glycine cleavage system T protein, aminomethyltransferase
[Parvularcula bermudensis HTCC2503]
Length = 279
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 31/282 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIIT----ADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEE 62
+ + V G FL ++T AD L Y A+LTPQGKIL YF+ ++
Sbjct: 9 TRDLVSVAGDDRFTFLGNVLTIRCDADGPPLRY-----GALLTPQGKILDTYFMWAR--G 61
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D ++ ++ + + ++ +L Y LR+ V I P++ + + +H + R
Sbjct: 62 DHYLFDLPKGRGEAFAGRLKRYALRAAVTI--APVDDINVGIRPDHPTDQGP--NGRDDA 117
Query: 123 ADVLL----------HRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDAL 171
A LL W + + ++ Y + I GI D T F + FP D
Sbjct: 118 ALTLLPDPRLPTLGARGLWAGSAAAGAPVEAEYRDHLIRLGIPDLGTGFDEADAFPLDVN 177
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D L GI KGC++GQEV SR+ + IRKR ++G +P G ++ +I++GT+
Sbjct: 178 LDRLGGIDHKKGCFVGQEVASRMFRKGEIRKRTYCLSGA-QIPALGQSVMVGEIKLGTVT 236
Query: 232 VVV--GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G+ ALA+ R+D++ + T G ++ + P W
Sbjct: 237 ARSGDGRAALALVRLDRL-GGREDSAVTTADGADLQLTAPFW 277
>gi|239946743|ref|ZP_04698496.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921019|gb|EER21043.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 308
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 47/309 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT + Y + +L QG+ L F + +
Sbjct: 5 LSNREVIKIIGLDSVKFLQNLITNYIKKNNYCY---TYLLNNQGRYLFDFFVYVPNLEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123
L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++
Sbjct: 62 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTMLG 121
Query: 124 -------------DVLLHRTWGHN------------EKIASDI-------------KTYH 145
D + +T + E + + I K Y
Sbjct: 122 FRSIYEFGVIPQLDRGIQKTIKQDWIPRSSRGMTRVESVHATIPPRESGDPASFNEKLYL 181
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++
Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241
Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
IT +DL IL D+ +IG + KA+A+ R +K + K +TV G++
Sbjct: 242 KITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALIREEK--YLADKEADITVKGIK 299
Query: 264 VKASFPHWY 272
+ S WY
Sbjct: 300 INLSLAPWY 308
>gi|57238820|ref|YP_179956.1| hypothetical protein Erum0890 [Ehrlichia ruminantium str.
Welgevonden]
gi|58578749|ref|YP_196961.1| hypothetical protein ERWE_CDS_00850 [Ehrlichia ruminantium str.
Welgevonden]
gi|57160899|emb|CAH57804.1| putative aminomethyl transferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417375|emb|CAI26579.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 280
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+S I G L T ++L L A S +LTP G+ L F + I+
Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFV--IQGS 62
Query: 64 TFIL-EIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS-----WNQEHTFSNSS- 114
+IL + S R+ +I+K L YKL++ V+I+ Q GV + + +T+ +
Sbjct: 63 KYILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDT 122
Query: 115 --FIDERFSIAD--VLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
F D R S V+ H + + E+ + + Y LRI++ + D N D + T FP
Sbjct: 123 VFFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFP 182
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
M LNGI KGCYIGQEVV+R+ +R I+K I +L + + ++++ E+
Sbjct: 183 LHFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQELFEN-AKVMSNQQEV 240
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
GT+ +G L + +++ L V G +VK
Sbjct: 241 GTVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVK 274
>gi|126733404|ref|ZP_01749151.1| aminomethyl transferase family protein [Roseobacter sp. CCS2]
gi|126716270|gb|EBA13134.1| aminomethyl transferase family protein [Roseobacter sp. CCS2]
Length = 244
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ ++ + + G + FLQ ++T DV I +A+LTPQGK + F + ++D
Sbjct: 1 MPERTVLSISGDDRMSFLQGLVTNDVTKADGAIIY-TALLTPQGKYIADFFVIG-QDDRL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ S +L +L Y+LR+ V IE + V+S +F D R D
Sbjct: 59 LIDVATSHAQTLGQRLTMYRLRAAVTIEQTDL---VVSRGTSPK-PEGAFADPRH---DA 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ R +G + I++D + +R+ H I + T + +A + LNG+ KGC+
Sbjct: 112 MGWRAYG-DTNISNDTD-WDAVRVKHLIPQTGVELTDDT-YVLEAGFEALNGVDFKKGCF 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+V+R++H+ ++K +T P G I D GTL V G ALA R D
Sbjct: 169 VGQEIVARMKHKTTLKKGLAQVTIKGHAMP-GDAITADGKPAGTLYTVSGDNALAFLRFD 227
Query: 246 KVDHAIKKGMA 256
+ D ++ G A
Sbjct: 228 RADGLMQAGDA 238
>gi|311249489|ref|XP_003123660.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like
[Sus scrofa]
Length = 354
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP---YKIARG--SAILTPQGK----ILLYFL 56
L ++ ++V G + PFL ++T + L LP +AR + L QG+ ++LY L
Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNE-LPLPGSASAVARAGYAHFLNVQGRTLYDVILYGL 111
Query: 57 ISKIEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNS 113
+E TF+LE D S D+L L+ +++R V +E P V VL E S
Sbjct: 112 PEHSDEQPTFLLECDSSVLDALQRHLVLHRIRRKVTVEPCPELRVWAVLPCAPEEA-GRS 170
Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157
+ E+ +L R +E A D++ YH R G+ +
Sbjct: 171 VPLQEKAQCTTILTRDPRTARMGWRLLSQDEGSALVPGGRPGDLQDYHRHRYQQGVPEGV 230
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--- 214
D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + + LP
Sbjct: 231 HDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHTGVIRKRLFPVQLSGRLPVGS 290
Query: 215 -PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAI-----KKGMALTVHGVRVKAS 267
G+ +LT+ + G +G LA+ R +K+ + + G+ V + AS
Sbjct: 291 IAPGTSVLTESGQAAGKYRAGLGDVGLALLRTEKIKGPLHIRTSESGL------VALTAS 344
Query: 268 FPHWY 272
P W+
Sbjct: 345 VPDWW 349
>gi|254464189|ref|ZP_05077600.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I]
gi|206685097|gb|EDZ45579.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I]
Length = 244
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S++ +++ G A FLQ ++T +V L + +A+LTPQGK + F ++ + D
Sbjct: 1 MSDRRILRLSGSDAKSFLQGLVTNNVDRLGDGLVY-AALLTPQGKYIADFFLA-ADGDAV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++D + L+ +L Y+LR++V +E+ + + + D R
Sbjct: 59 LLDVDAPLAEGLLKRLNMYRLRADVQVEMTELQ----VKRGTGAAPDGALEDPRHPAMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L+ G + D + +R+ H I + + P + + +A + LNG+ KGCY
Sbjct: 115 RLYGLEGGD-----DGSDWDAIRVAHCIPETGVELGPES-YILEAGFEALNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
+GQEV +R++H+ +RK R + + G P G+ I GTL G K +A R
Sbjct: 169 VGQEVTARMKHKTELRKGFRTVEVEGA---APVGTEITAGGKPAGTLFTQSGGKGIAYLR 225
Query: 244 IDKVDHAIKKGMA 256
D+ ++ G A
Sbjct: 226 FDRAKGEMQAGDA 238
>gi|58696941|ref|ZP_00372437.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698833|ref|ZP_00373708.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698939|ref|ZP_00373799.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630247|ref|YP_002727038.1| aminomethyl transferase family protein [Wolbachia sp. wRi]
gi|58534541|gb|EAL58680.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534649|gb|EAL58773.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58536828|gb|EAL60046.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592228|gb|ACN95247.1| aminomethyl transferase family protein [Wolbachia sp. wRi]
Length = 268
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114
+ T +LE + +I+KL L++ + ++I+ ++ GV+ + S S
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLKVKIKDVSALYKVGVLFNTKLAECSSESQV 117
Query: 115 -FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIF 166
F D R H+ G H ++I D Y ++RI + + D D + ++ F
Sbjct: 118 IFQDPR--------HKLLGMRIIHKDEIKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSF 169
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DI 225
P L+D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + +
Sbjct: 170 PLQFLIDKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNE 229
Query: 226 EIGTLGVVVGKKALAIARIDK 246
EIG L V LA+ K
Sbjct: 230 EIGELRSSVDNIGLALLNTGK 250
>gi|329663396|ref|NP_001192509.1| IBA57, iron-sulfur cluster assembly homolog [Bos taurus]
gi|297476223|ref|XP_002688553.1| PREDICTED: hypothetical protein [Bos taurus]
gi|296486216|gb|DAA28329.1| hypothetical protein BOS_7084 [Bos taurus]
Length = 358
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 137/310 (44%), Gaps = 52/310 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA----------ILTPQGK----I 51
L ++ ++V G + PFL ++T + L LP A G A L QG+ +
Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNE-LPLPGP-AVGEASTSARAGYAHFLNVQGRTLYDV 110
Query: 52 LLYFLISKI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEH 108
+LY L + E+ TF+LE D S D+L LL +K+R V +E P V VL Q
Sbjct: 111 ILYGLPERSSEQPTFLLECDSSVVDALQRHLLLHKIRRKVTVEPCPELRVWAVLPCAQRE 170
Query: 109 TFSNSSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHG 152
+ + ++ A VL RT+ ++ S D++ YH R G
Sbjct: 171 A-GGAGPLRKKTVCAPVLTRDPRTYRMGWRLLSQDEGSALVPGGRLGDLQDYHRHRYQQG 229
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT 210
+ + D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR P+ +G
Sbjct: 230 VPEGVHDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLFPVQFSGA 289
Query: 211 ---DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI-----KKGMALTVHGV 262
+ P S + G +G LA+ R +K+ + + G+ V
Sbjct: 290 VPGGGIAPGASVLTESGQAAGKYRAGLGDVGLALLRSEKIKGPLHIRTSESGL------V 343
Query: 263 RVKASFPHWY 272
+ AS P W+
Sbjct: 344 ALTASVPDWW 353
>gi|67906657|gb|AAY82747.1| predicted aminomethyltransferase [uncultured bacterium
eBACmed18B02]
Length = 296
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 28/295 (9%)
Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+ +VY L +++ + + G A+ FLQ +I+ D+ + + +++L+PQGK L F+I K
Sbjct: 3 IKNVYILKDRAILYINGDDAVSFLQNLISNDINKVSETYSCFASLLSPQGKFLYEFIIVK 62
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---------------------EIQPIN 98
+ ++++ ++S+ D L +L YKLRS V I E + +
Sbjct: 63 -HKSGYLIDCEKSQVDELYKQLSVYKLRSKVEILNLSNEFVVAAFSYEKFLTFDEAKKVP 121
Query: 99 GVVLSWNQEHTFSN--SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
G L + ++ F + + + R I L+ + E +DI Y+ L GIV
Sbjct: 122 GFTLKFREDPIFLDPRNKQLGARLIINLEKLYLSLKKLELHDADINEYYSLSHKLGIVPK 181
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
N + L + F + D LNGI KGCY+GQE +RI+ +N + KR + I D
Sbjct: 182 NLNQLQNKAFGIECNYDELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIDIIDGKLHE 241
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G I + EIG V+ A I +D + +K P W
Sbjct: 242 GEGIFNKENEIGK---VLINNEYPFALIKFLDKNFDENAEFKTKEASIKIKKPEW 293
>gi|332185466|ref|ZP_08387214.1| aminomethyltransferase folate-binding domain protein [Sphingomonas
sp. S17]
gi|332014444|gb|EGI56501.1| aminomethyltransferase folate-binding domain protein [Sphingomonas
sp. S17]
Length = 252
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L++++ +++ G+ FLQ ++T DV L R + +LTPQGK L FL+ E
Sbjct: 11 ATTLTDRTLLRIAGEDVCGFLQGLVTQDVQGLTADAPRWAGLLTPQGKALFDFLLWA-EG 69
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D +++ + ++ ++L +L Y+LR I I P+ + + W+ +++ D R
Sbjct: 70 DAILIDAEATQAEALTRRLSIYRLRR--AITIAPVPELAVHWS---LSADTQPRDPRLPD 124
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L HR W E S + + R++ G+ + + + LNG+S TK
Sbjct: 125 ---LGHRWWAPAEP-GSATEAWTAHRLSLGVTEGVGELGSGETLWLECNARELNGVSFTK 180
Query: 183 GCYIGQEVVSRIQHRNIIRKR 203
GCY+GQE +R+ HR+ + +R
Sbjct: 181 GCYVGQENTARMHHRSKVNRR 201
>gi|84516026|ref|ZP_01003387.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
gi|84510468|gb|EAQ06924.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
Length = 243
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 19/254 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
+S++ + + G + FLQ ++T DV + A+G +A+LTPQGK + F + ++
Sbjct: 1 MSDRMVLSISGVDRVSFLQGLVTNDVT----RAAQGIIYAALLTPQGKFIADFFVLG-QD 55
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D ++++ +S +L+ +L Y+LR+ V I + V+S T + D R +
Sbjct: 56 DRLLVDVAQSHGATLLQRLSMYRLRAAVQIGQTDL---VVSRGTGST-PPGALPDPRHA- 110
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ R +G ++ SD + LR+ H I + + P T + +A + L+G+ K
Sbjct: 111 --GMGWRFYGDSD--ISDQTDWDALRVAHLIPETGIELTPET-YVLEAGFEALHGVDFRK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQE+V+R++H+ +RK + D G PI D + G L + G A+A
Sbjct: 166 GCYVGQEIVARMKHKTELRK-GLARVRIDGAAQPGDPITADGKDTGVLHTISGDHAIAYL 224
Query: 243 RIDKVDHAIKKGMA 256
R D+ ++ G A
Sbjct: 225 RFDRATGPMQAGSA 238
>gi|159044636|ref|YP_001533430.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12]
gi|157912396|gb|ABV93829.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12]
Length = 261
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 25/255 (9%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-------SAILTPQGKILLYFLISKIE 61
++ I+V G+ A FLQ ++T D +A+G +A+L+PQGK L F + +
Sbjct: 19 RAVIRVTGRDARDFLQGMVTND-------LAKGLEHGLVYAALLSPQGKYLADFFVLA-Q 70
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+D +L+ + L+ +L +KLR++V +E + V + D R
Sbjct: 71 DDALLLDAPEALAPDLLKRLTMFKLRADVTLEKTEMP-VARGLGPA---PEGALADPRDP 126
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
L+ G E + + LR+ H + + T+ +P+ + + + L+G+
Sbjct: 127 ALGWRLYGVAGGPE-----VTDWDALRVAHLVPEAGTELIPNDSYILEMGFERLHGVDFK 181
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQEVV+R++H+ +RK + + P G I +G LG G +ALA
Sbjct: 182 KGCYVGQEVVARMKHKTELRKGLARVAVAGEAAP-GDEITAGGKPVGVLGTRSGDRALAY 240
Query: 242 ARIDKVDHAIKKGMA 256
R D+ ++ G A
Sbjct: 241 LRFDRATGPMEAGAA 255
>gi|58197556|ref|NP_001010867.1| putative transferase C1orf69, mitochondrial precursor [Homo
sapiens]
gi|74744873|sp|Q5T440|CAF17_HUMAN RecName: Full=Putative transferase CAF17, mitochondrial; AltName:
Full=Iron-sulfur cluster assembly factor homolog; Flags:
Precursor
gi|55959201|emb|CAI15071.1| chromosome 1 open reading frame 69 [Homo sapiens]
Length = 356
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 34/300 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ A G A L QG+ ++L
Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
Y L E F+LE D S + +L L Y++R V +E P V +
Sbjct: 113 YGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGA 172
Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157
+ + ER A +L+ R +E A D+ YH+ R G+ +
Sbjct: 173 ASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGV 232
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S
Sbjct: 233 RDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSG 292
Query: 217 ---GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ +LT + +G G LA+ +K+ + + V + AS P W+
Sbjct: 293 ITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 351
>gi|58616809|ref|YP_196008.1| hypothetical protein ERGA_CDS_00820 [Ehrlichia ruminantium str.
Gardel]
gi|58416421|emb|CAI27534.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 280
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+S I G L T ++L L A S +LTP G+ L F + I+
Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFV--IQGS 62
Query: 64 TFIL-EIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS-----WNQEHTFSNSS- 114
+IL + S R+ +I+K L YKL++ V+I+ Q GV + + +T+ +
Sbjct: 63 KYILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDT 122
Query: 115 --FIDERFSIAD--VLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
F D R S V+ H + + E+ + + Y LRI++ + D N D + T FP
Sbjct: 123 VFFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFP 182
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
M LNGI KGCYIGQEVV+R+ +R I+K I L + + ++++ E+
Sbjct: 183 LHFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQKLFEN-AKVMSNQQEV 240
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
GT+ +G L + +++ L V G +VK
Sbjct: 241 GTVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVK 274
>gi|114573041|ref|XP_514253.2| PREDICTED: putative transferase CAF17, mitochondrial isoform 2 [Pan
troglodytes]
Length = 356
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 34/300 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ A G A L QG+ ++L
Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
Y L E F+LE D S + +L L Y++R V +E P V +
Sbjct: 113 YGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGA 172
Query: 114 SFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDPN 157
+ + ER A +L+ R +E A D+ YH+ R G+ +
Sbjct: 173 ASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGV 232
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S
Sbjct: 233 RDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSG 292
Query: 217 ---GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ +LT + +G G LA+ +K+ + + V + AS P W+
Sbjct: 293 ITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 351
>gi|42520194|ref|NP_966109.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42409932|gb|AAS14043.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 268
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 15/259 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114
+ T +LE + +I+KL L++ + ++I+ ++ GV+ + S S
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117
Query: 115 -FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
F D R + + ++H+ ++ D Y ++RI + + D D + ++ FP L+
Sbjct: 118 IFQDPRHKLLGMRIIHKD--EMKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLI 175
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLG 231
D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + + EIG L
Sbjct: 176 DKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELR 235
Query: 232 VVVGKKALAIARIDKVDHA 250
V A+ K HA
Sbjct: 236 SSVDNIGFALLNTGK-SHA 253
>gi|149915805|ref|ZP_01904330.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
gi|149810387|gb|EDM70232.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
Length = 244
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 19/248 (7%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ +++ G A FLQ ++T ++ L + + +A+LTPQGK + F ++ E T +L
Sbjct: 2 TRTILEITGSEAQDFLQGLVTNEMRKLDHGLVY-AAMLTPQGKYIADFFLAGHGE-TILL 59
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++D S L+ +L YKLR++V I E+Q G + + + D R
Sbjct: 60 DVDESLSAQLMQRLSMYKLRADVTITQSELQVKRGTGPA-------PDGALADPRHPDLG 112
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L+ G + D + +R+ H I + + L + F +A + LNG+ KGC
Sbjct: 113 WRLYGAEGGD-----DGTDWEAIRVAHCIPETGIE-LSADTFILEAGFERLNGVDFKKGC 166
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y+GQEV +R++H+ +RK + P G+ I + + GTL G K +A R
Sbjct: 167 YVGQEVTARMKHKTELRKGLATVE-VHGTAPVGTQITSSEKPAGTLFTQSGGKGIAYLRF 225
Query: 245 DKVDHAIK 252
D+ ++
Sbjct: 226 DRASGQMQ 233
>gi|152013705|gb|ABS19968.1| glycine cleavage T protein [Artemia franciscana]
Length = 231
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N+ ++V G + PFLQ +IT D+ L + + + L QG++L ++ + ++L
Sbjct: 33 NRGLVRVSGVDSAPFLQGLITNDINHLEKQPSMYTMFLNRQGRVLFDVVVFRENNHDYLL 92
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADVL 126
+ D +SL+ + ++LR IE+ P++ + + + F F D R +
Sbjct: 93 DCDSRCINSLVKHMKMFRLREK--IEVNPVDNLAIVVTSDLNFFRGLFWHDPRTEMLGTR 150
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
EK+ S Y R GI + D P FP ++ D L+G+S TKGCYI
Sbjct: 151 AVIDANLVEKLVSKTTFYSLQRFELGIPEGIEDLPPGECFPLESNCDYLHGVSFTKGCYI 210
Query: 187 GQEVVSRIQHRNIIRKRPM 205
GQE+ +R H + RKR M
Sbjct: 211 GQELTARTYHTGVTRKRLM 229
>gi|329850297|ref|ZP_08265142.1| glycine cleavage T-protein C-terminal barrel domain protein
[Asticcacaulis biprosthecum C19]
gi|328840612|gb|EGF90183.1| glycine cleavage T-protein C-terminal barrel domain protein
[Asticcacaulis biprosthecum C19]
Length = 218
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSN- 112
L+S D L++ ++ R+ L+ KL Y+LR+ V I+ P+ E S+
Sbjct: 6 LLSPRSADEVWLDVPQTAREELVAKLNMYRLRAKVTIDALDLPVYAAFDGPMPEGFASDP 65
Query: 113 -SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
S I FS A +G A+D + R ++G+ + TDF ++ DA
Sbjct: 66 RSEVIGADFSFA-------YGPQTPNATDWAAF---RYSYGLAEAGTDFAKDELYAIDAN 115
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+DLLNGI KGCY+GQE+ SR++ R I+ R + + LPP G+ +L + G +
Sbjct: 116 LDLLNGIDFKKGCYVGQELTSRMKRRGQIKNRILPLRHAGHLPP-GAEVLNGERRAGEVL 174
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ +LA+ R+D++D LT G + + P W
Sbjct: 175 ASIDGNSLALMRLDRLDG------ELTCDGHTLNLTIPDW 208
>gi|146278057|ref|YP_001168216.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17025]
gi|145556298|gb|ABP70911.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17025]
Length = 255
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57
M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F I
Sbjct: 1 MPGEIATDRRLWELTGKDGLHFLQGLVSNDVR--PLERADGIVWAALLSPQGKYLADFFI 58
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
++E FI DR ++ +L YKLR++V +I P++ V+ E + D
Sbjct: 59 VRLEGRLFIDISDRLA-EATFRRLGMYKLRADV--QIAPLDLPVVRGLGEP--PTGALPD 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R L R +G S + +R+ H I + + +P + ++ + L+G
Sbjct: 114 PRHPD---LGWRGYGLTGDAPS--IDWDAIRVAHVIPESGLELIPDDSYILESGFERLHG 168
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK + ++ + D P G+ I D +GTL G +
Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRKGLVRVSISGDA-PFGAEITADGKPVGTLFTRSGDR 227
Query: 238 ALAIARIDKVDHAIKKGMAL 257
A+A R D+ ++ G A+
Sbjct: 228 AIAFVRHDRAAGEMRAGEAV 247
>gi|255261983|ref|ZP_05341325.1| glycine cleavage T protein [Thalassiobium sp. R2A62]
gi|255104318|gb|EET46992.1| glycine cleavage T protein [Thalassiobium sp. R2A62]
Length = 241
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 22/252 (8%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTFILE 68
+++ G A PFLQ+++T D+ RG +A+LTPQGK +L F + +D ++
Sbjct: 5 LELTGSDATPFLQSLVTNDI------NKRGLVYTALLTPQGKFMLDFFVLN-HDDALWID 57
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ L +L Y+LR++V+I ++ V + ++ D R + +
Sbjct: 58 VAADHAAGLAQRLTMYRLRADVMI--AELDITVSRGTGDAPIG--AYPDPR---SPAMGW 110
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G + + +D + LR+ + + + P + + + + LNG+ KGCY+GQ
Sbjct: 111 RDYGEAQDMPTD---WDALRVAQMVPQLDAELGPDS-YILEMGFERLNGVDFKKGCYVGQ 166
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
E+V+R++H+ +RK ++ ++ L G+ I ++ +GT+ V G ALA R D+ +
Sbjct: 167 EIVARMKHKTELRKGLARVSSSEPL-SEGAEITSNGKPVGTVHTVSGTSALAYLRFDRAN 225
Query: 249 HAIKKGMALTVH 260
I G+ +T+
Sbjct: 226 EMISDGINVTLE 237
>gi|229586836|ref|YP_002845337.1| GcvT-like putative aminomethyltransferase [Rickettsia africae
ESF-5]
gi|228021886|gb|ACP53594.1| GcvT-like putative aminomethyltransferase [Rickettsia africae
ESF-5]
Length = 335
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 141/334 (42%), Gaps = 70/334 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGKTMSNAVGES 63
Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91
+L QG+ L F + + L+ID+S + +LI L FYK RS + +
Sbjct: 64 KLIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIKYLNFYKFRSKIQV 123
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131
I+ V+ S + S + D R++ ++ + W
Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWL 183
Query: 132 GH--NEKIASDIKT---------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
H E S KT Y E + N I+D D + P+ + LN IS
Sbjct: 184 SHRVTEGEPSSSKTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA
Sbjct: 244 DKGCYVGQEVISRTKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A+ R +K + K +TV G+++ S WY
Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|332252096|ref|XP_003275189.1| PREDICTED: putative transferase C1orf69, mitochondrial [Nomascus
leucogenys]
Length = 357
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 35/301 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ Y A + L QG+ ++L
Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPYARAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
Y L EE F+LE DRS + +L L Y++R V +E P V
Sbjct: 113 YGLQEHSEEVSVFLLECDRSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACG 172
Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156
++ + E+ A +L+ R +E A D+ YH+ R G+ +
Sbjct: 173 AASLQEKAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIG E+ +R H +IRKR + D P S
Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGHELTARTHHMGVIRKRLFPVRVLDPFPTS 292
Query: 217 ----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G+ +LT + +G G LA+ +K+ + + V + AS P W
Sbjct: 293 GITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDW 351
Query: 272 Y 272
+
Sbjct: 352 W 352
>gi|24645123|ref|NP_649814.1| CG8043 [Drosophila melanogaster]
gi|7299068|gb|AAF54268.1| CG8043 [Drosophila melanogaster]
gi|28557661|gb|AAO45236.1| GH14121p [Drosophila melanogaster]
gi|220946676|gb|ACL85881.1| CG8043-PA [synthetic construct]
gi|220956316|gb|ACL90701.1| CG8043-PA [synthetic construct]
Length = 348
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61
L N+ I+V G +PFLQ + T DV + P A A + LLY L
Sbjct: 43 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117
+T ++E DR L Y++R IE+ ++ W + S +
Sbjct: 103 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVMFNLKDASEAVPNPHP 160
Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157
+ F D LH W K +D T Y LR G+ +
Sbjct: 161 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATAASSDNSYQLLRYKQGVGEGC 220
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+
Sbjct: 221 SELTPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 278
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + LG V G K +A+ RI+KV + L + G R P W+
Sbjct: 279 -GSSQDVTSLAGAKLGRVFGFAHKHGIALLRIEKV---LNGRPELMIDGERCYVERPEWW 334
>gi|297661745|ref|XP_002809384.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Pongo
abelii]
Length = 357
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 35/301 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------GSA-ILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ A G A L QG+ ++L
Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
Y L EE F+LE D S + +L L Y++R V +E P V
Sbjct: 113 YGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACG 172
Query: 113 SSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGIVDP 156
++ + ER A +L+ R +E A D+ YH+ R G+ +
Sbjct: 173 AASLQERAGAATILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D LP S
Sbjct: 233 VRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTS 292
Query: 217 ----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G+ +LT + +G G LA+ +K+ + + V + AS P W
Sbjct: 293 GITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDW 351
Query: 272 Y 272
+
Sbjct: 352 W 352
>gi|194903760|ref|XP_001980933.1| GG11944 [Drosophila erecta]
gi|190652636|gb|EDV49891.1| GG11944 [Drosophila erecta]
Length = 348
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---ILTPQGKILLYFLISKIEE 62
L N+ I+V G+ +PFLQ + T DV + S L G++L ++ +
Sbjct: 43 LGNRELIRVHGQEVVPFLQGLATNDVARIRSPGGPASMYAHFLNKAGRLLYDTIMYRTNN 102
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSS- 114
+T ++E DR L Y++R IE+ ++ +W + N
Sbjct: 103 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVPNPHP 160
Query: 115 ----FIDERFSI-ADVLLHRT---WGHNEKIASDIKT---------YHELRINHGIVDPN 157
+D R + +L T W K D T Y LR G+ +
Sbjct: 161 DLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGVGEGC 220
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T DL
Sbjct: 221 SELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDL-- 278
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + LG V G K +A+ RI+KV + L + G R P W+
Sbjct: 279 -GSSQDVTSVAGAKLGRVFGSAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEWW 334
>gi|241111420|ref|XP_002399278.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492944|gb|EEC02585.1| conserved hypothetical protein [Ixodes scapularis]
Length = 356
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 45/308 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAI----LTPQGKILLYFLIS 58
L ++ I++ GK +PFLQ +IT D L P S + L G++L FL+
Sbjct: 39 LRSRKLIRLRGKDCLPFLQGMITNDTRHLSVDPQPSVSTSCMYAMMLNAAGRVLYDFLLY 98
Query: 59 KIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQPINGVV---L 102
K + +D +LE D R +++ YKLR +V +E P G V L
Sbjct: 99 KPDPRHDDEVLLECDADARSTVLKLFNLYKLRKDVRLEPCDELSVWAAFHPFCGTVDEPL 158
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTW--GHNEKIASDI-----------KTYHELRI 149
T + + ++ R +L HR + +AS+ +Y +LR
Sbjct: 159 PAEIPITVAGDATVNVRDPRLYLLGHRVLLDSTQDLVASNPTFQAAPQDSSESSYTKLRY 218
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + D + FP + D ++G+S KGCYIGQE+ +R H ++RKR M +
Sbjct: 219 QLGVSEGLGDLPTANCFPLEYNADYMSGVSFHKGCYIGQELTARTHHTGVVRKRIMPVVL 278
Query: 210 TDDLPPSGSPILT-----DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
D + G T +D +G V G+ LA+ R+D+ A + L+V VR+
Sbjct: 279 LDRVDGGGVASDTVVKDGNDKAVGKFRVHRGQVGLALLRVDEALSAAE----LSVGSVRL 334
Query: 265 KASFPHWY 272
P W+
Sbjct: 335 STVKPGWW 342
>gi|99034332|ref|ZP_01314366.1| hypothetical protein Wendoof_01000832 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 239
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 14/239 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDNRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114
+ T +LE + +I+KL L++ + ++I+ ++ GV+ + S S
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117
Query: 115 -FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
F D R + + ++H+ ++ D Y ++RI + + D D + ++ FP L+
Sbjct: 118 IFQDPRHKLLGMRIIHKD--EMKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLI 175
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTL 230
D +NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + + + EIG L
Sbjct: 176 DKVNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGEL 234
>gi|73666722|ref|YP_302738.1| glycine cleavage T protein(aminomethyl transferase) [Ehrlichia
canis str. Jake]
gi|72393863|gb|AAZ68140.1| Glycine cleavage T protein(aminomethyl transferase) [Ehrlichia
canis str. Jake]
Length = 278
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 18/261 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L N+S + G A L T +VL L A S +L+P G+ + F + + E+
Sbjct: 5 IVLPNRSIVLFHGPDARQLLNRTTTNNVLNLTQNKAVYSLLLSPSGRYMYDFFVVQYEK- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-------HTFSNSS-- 114
+L+ +D +I K L YKL+S V+I + V + +E +T+ +
Sbjct: 64 YILLDCCSIDKDEIIQKFLSYKLQSKVVIREKKHYKVGVFIGEESSSNVCGYTYCEGNTI 123
Query: 115 -FIDERFSIAD--VLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPH 168
F D R S V+ + + SD K Y LRIN+ + D N D + T FP
Sbjct: 124 FFQDPRLSTLGLRVIFDESNEALSNVNSDAERYKDYEMLRINNTVPDCNKDMIKGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
MD N I KGCYIGQEVV+R+ + +K +I+ ++ + ++ D ++G
Sbjct: 184 QFRMDEFNAIDFNKGCYIGQEVVARMYRAGVKKKIYTVISESESFDD--TKVMWDQKQVG 241
Query: 229 TLGVVVGKKALAIARIDKVDH 249
L VG L + I+ D+
Sbjct: 242 ELLSNVGNIGLCLLDINSCDN 262
>gi|165933349|ref|YP_001650138.1| aminomethyltransferase family protein [Rickettsia rickettsii str.
Iowa]
gi|165908436|gb|ABY72732.1| aminomethyltransferase family protein [Rickettsia rickettsii str.
Iowa]
Length = 335
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 141/334 (42%), Gaps = 70/334 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63
Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91
+L QG+ L F + + L+ID+S + +LI+ L FYK RS + +
Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131
I+ V+ S + S + D R++ ++ + W
Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWS 183
Query: 132 ------GHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
G + + Y E + N I+D D + P+ + LN IS
Sbjct: 184 SHRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV+SR +++ +IRK+ IT +DL + IL D+ +IG + KA
Sbjct: 244 DKGCYVGQEVISRAKYQGVIRKKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKA 303
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A+ R +K + K +TV G+++ S WY
Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|84683617|ref|ZP_01011520.1| aminomethyltransferase [Maritimibacter alkaliphilus HTCC2654]
gi|84668360|gb|EAQ14827.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2654]
Length = 249
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 19/259 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ N++ ++ G + FL ++T +V P IA +A+ TPQGK + F +
Sbjct: 1 MTGETHENRTIFRITGADRVKFLDNLVTNNVK--PGGIAY-AALQTPQGKYIADFFMVDT 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D ++++D +L +L YKLR++V +I+P L ++ +F D R
Sbjct: 58 G-DALLIDVDSDLAQTLGQRLTMYKLRADV--QIEPTELFALRGRKD--MPEGAFPDPRH 112
Query: 121 SIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ W D T + LR+ + + P T F +A D LNG+
Sbjct: 113 AAL------GWRLYSDTPGDAPTTDWEALRVELNVPASGAELTPDT-FILEAGFDRLNGV 165
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKK 237
KGC++GQEV +R++H+ +RK + D G+ I TDD + G L G +
Sbjct: 166 DFKKGCFVGQEVTARMKHKTELRK-GFVTVAVDGEAEPGTEITTDDGKPAGMLHTRAGDR 224
Query: 238 ALAIARIDKVDHAIKKGMA 256
A+A R D+ + + G A
Sbjct: 225 AIAYLRFDRAERPMTAGDA 243
>gi|148284975|ref|YP_001249065.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str.
Boryong]
gi|146740414|emb|CAM80888.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str.
Boryong]
Length = 288
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 19/282 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
L+N++ +++ G A FL I T +V+ A+ S IL+PQG+ L +FLI+ +T
Sbjct: 7 LNNRAILELSGCDASNFLLRI-TTNVIPAANGEAKYSMILSPQGRFLFDFFLIN--NHNT 63
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSNSS--- 114
F ++ S +++L+ KL +KLRS V I ++ V+ S N H N++
Sbjct: 64 FFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTAKLV 123
Query: 115 --FIDERFS-IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+ D RF+ + LL + S+ Y + I D D + P +
Sbjct: 124 TQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPPEYG 183
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEIGT 229
D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +PI+ + IG
Sbjct: 184 ADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNIIGY 243
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ +A+ R + I +TV ++K S P W
Sbjct: 244 WCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285
>gi|195330640|ref|XP_002032011.1| GM23750 [Drosophila sechellia]
gi|194120954|gb|EDW42997.1| GM23750 [Drosophila sechellia]
Length = 347
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61
L N+ I+V G +PFLQ + T DV + P A A + LLY L
Sbjct: 42 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 101
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117
+T ++E DR L Y++R IE+ ++ W + S +
Sbjct: 102 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVPNPHP 159
Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157
+ F D LH W K +D T Y LR G+ +
Sbjct: 160 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASSDNSYQLLRYKQGVGEGC 219
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+
Sbjct: 220 SELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 277
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + LG V G K +A+ RI+KV + L + G R P W+
Sbjct: 278 -GSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEWW 333
>gi|83941198|ref|ZP_00953660.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
gi|83847018|gb|EAP84893.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
Length = 247
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+
Sbjct: 1 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLSA-DGDSV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + D+L+ +L YKLR++V I+ G+ L E + + ++ D R D
Sbjct: 59 LLDVAEADADALVQRLTMYKLRADVTIDA---TGLHLHRGLE-SAPDDAYSDPR----DA 110
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ + D + LR+ + I + + L S F + + LNG+ KGCY
Sbjct: 111 RMGWRAYRDTPQTDDTTDWDALRVTYMIPETGAE-LTSDSFILEMGFERLNGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + + P G+ I D GT+ G ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQVEISAPVEP-GTDITADGKPAGTIFTRTGTHALAYLRYD 228
Query: 246 KVDHAIKKGMA 256
+ A++ G A
Sbjct: 229 RAKAAMQAGDA 239
>gi|260575028|ref|ZP_05843029.1| folate-binding protein YgfZ [Rhodobacter sp. SW2]
gi|259022650|gb|EEW25945.1| folate-binding protein YgfZ [Rhodobacter sp. SW2]
Length = 251
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 20/259 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-----SAILTPQGKILLYF 55
M + + + V GK A+ FLQ +++ D+ L A+G +A+L+PQGK L F
Sbjct: 1 MQGEAATGRRLVAVAGKDALEFLQGLVSNDLRPL----AKGPGIVWTALLSPQGKYLADF 56
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ + + +L++ ++ + +L Y+LR++V I P LS ++ + +
Sbjct: 57 FVVA-QPEGLLLDLPEVLAEATLRRLAMYRLRADVQIAESP-----LSVSRGLGLAPADA 110
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ + A L R +G A + + +R+ H I + + +P + +A + L
Sbjct: 111 LPDPRDPA--LGWRRYGAPGGPA--VIDWDAIRVAHCIPESGIELIPDDSYILEAGFERL 166
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
+G+ KGCY+GQEV +R++H+ +RK +++ D + P G+ IL D G + G
Sbjct: 167 HGVDFRKGCYVGQEVTARMKHKTELRKG-LVLVRVDGVVPIGAEILADGKPAGQVFTQSG 225
Query: 236 KKALAIARIDKVDHAIKKG 254
+ +A R D+ + G
Sbjct: 226 GQGIAFLRFDRASGEMLAG 244
>gi|34581578|ref|ZP_00143058.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262963|gb|EAA26467.1| unknown [Rickettsia sibirica 246]
Length = 335
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 70/334 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63
Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91
+L QG+ L F + + L+ID+S + +LI+ L FYK RS + +
Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131
I+ V+ S + S + D R++ ++ + W
Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWS 183
Query: 132 -----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ Y E + N I+D D + P+ + LN IS
Sbjct: 184 SHRVTEGESPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA
Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A+ R +K + K +TV G+++ S WY
Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|195572493|ref|XP_002104230.1| GD18562 [Drosophila simulans]
gi|194200157|gb|EDX13733.1| GD18562 [Drosophila simulans]
Length = 347
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61
L N+ I+V G +PFLQ + T DV + P A A + LLY L
Sbjct: 42 LGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRTNN 101
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117
+T ++E DR L Y++R IE+ ++ W + S +
Sbjct: 102 PETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVPNPHP 159
Query: 118 ERFSIADVLLH-----------RTWGHNEKIASDIKT---------YHELRINHGIVDPN 157
+ F D LH W K +D T Y LR G+ +
Sbjct: 160 DLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASPDNSYQLLRYKQGVGEGC 219
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T D+
Sbjct: 220 SELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDV-- 277
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + LG V G K +A+ RI+KV + L + G R P W+
Sbjct: 278 -GSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVDRPEWW 333
>gi|195499172|ref|XP_002096836.1| GE25894 [Drosophila yakuba]
gi|194182937|gb|EDW96548.1| GE25894 [Drosophila yakuba]
Length = 348
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 124/300 (41%), Gaps = 41/300 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLY--FLISKIE 61
L N+ I+V G +PFLQ + T DV + P A A + LLY L
Sbjct: 43 LGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILYRTNN 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSS- 114
+T ++E DR L Y++R IE+ ++ +W + N
Sbjct: 103 PETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVPNPHP 160
Query: 115 ----FIDERFSIADV-LLHRT---WGHNEKIASDIKT---------YHELRINHGIVDPN 157
+D R + +L T W K D T Y LR G+ +
Sbjct: 161 DLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGVGEGC 220
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR P+ +T DL
Sbjct: 221 SELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPIDL-- 278
Query: 216 SGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + LG V G K +A+ RI+KV + L + G R P W+
Sbjct: 279 -GSNQDVTSVAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCFVERPEWW 334
>gi|157964644|ref|YP_001499468.1| putative aminomethyltransferase [Rickettsia massiliae MTU5]
gi|157844420|gb|ABV84921.1| Putative aminomethyltransferase [Rickettsia massiliae MTU5]
Length = 338
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGSAI---------------- 44
LSN+ IK+ G ++ FLQ +IT D+ + YK I
Sbjct: 8 LSNREVIKIIGFDSVKFLQNLITNDICKSNSVEFGYKEQGAKPIIIGETTSNAVGESKSI 67
Query: 45 ---------LTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94
L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+
Sbjct: 68 DYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVIDC 127
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIA--------DVL----------LHRTW----- 131
V+ S + S + D R++ DV+ + + W
Sbjct: 128 SDEYKVIYSLQKLDINSLITVRDPRYAKLGFRSINKLDVIPWLDRGIQKIIKKDWTPWSS 187
Query: 132 -GHNEKIASDIKT---------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
G E T Y E + N I+D D + P+ + LN IS
Sbjct: 188 HGVTEGAPPPSTTSPSESGNLIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 247
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+
Sbjct: 248 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 307
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 308 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 338
>gi|83854688|ref|ZP_00948218.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
gi|83842531|gb|EAP81698.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
Length = 256
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+
Sbjct: 10 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLSA-DGDSV 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + D+L+ +L YKLR++V I+ ++ L E++ + ++ D R D
Sbjct: 68 LLDVAEADADALVQRLTMYKLRADVTIDATELH---LHRGLENS-PDDAYSDPR----DA 119
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ + D + LR+ + I + + L S F + + LNG+ KGCY
Sbjct: 120 RMGWRAYRDTPQTDDTTDWDALRVTYMIPETGAE-LTSDSFILEMGFERLNGVDFRKGCY 178
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + + P G+ I D GT+ G ALA R D
Sbjct: 179 VGQEVTARMKHKTELRKGLAQVEISAPVEP-GTDITADGKPAGTIFTRTGTHALAYLRYD 237
Query: 246 KVDHAIKKGMA 256
+ A++ G A
Sbjct: 238 RAKAAMQAGDA 248
>gi|303227895|ref|NP_001026129.2| chromosome 1 open reading frame 69 [Gallus gallus]
Length = 332
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 134/305 (43%), Gaps = 50/305 (16%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-----------QGKILLYFL 56
++ + V G A FLQ ++T DV L +A G P QG+ L +
Sbjct: 32 GRALLSVRGAEAAVFLQGLLTNDVTRL---VAAGEGPAGPPRALYAHALNVQGRCLYDLI 88
Query: 57 I-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEH 108
+ S+ EE +LE D S D++ L YK+R V I P + L W E
Sbjct: 89 VYRLHESQEEEPHILLECDSSVLDAIQKHLKLYKIRRKV--SISPCLDLSL-WAVVPGEQ 145
Query: 109 TFSNSSFIDERFSI-----ADVLLHR---TWGHN--EKIAS----DIKTYHELRINHGIV 154
S + D + A+V+ R G N E I +++ YH R GI
Sbjct: 146 AGDISRYADRALVLTPDPRAEVMGWRLIIKAGANLPEIIPGSRIENVQDYHRHRYKQGIP 205
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP
Sbjct: 206 EGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLP 265
Query: 215 ----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK--AS 267
P G+ ILT+ + G + +A+ R+ V+ + L V G +VK AS
Sbjct: 266 QESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEP----LCLNVAGDKVKLTAS 321
Query: 268 FPHWY 272
P W+
Sbjct: 322 IPEWW 326
>gi|157828633|ref|YP_001494875.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801114|gb|ABV76367.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 335
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 70/334 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63
Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91
+L QG+ L F + + L+ID+S + +LI+ L FYK RS + +
Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131
I+ V+ S + S + D R++ ++ + W
Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWS 183
Query: 132 ------GHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
G + + Y E + N I+D D + P+ + LN IS
Sbjct: 184 SHRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV+SR +++ +IR++ IT +DL + IL D+ +IG + KA
Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKA 303
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A+ R +K + K +TV G+++ S WY
Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|15892621|ref|NP_360335.1| hypothetical protein RC0698 [Rickettsia conorii str. Malish 7]
gi|15619789|gb|AAL03236.1| unknown [Rickettsia conorii str. Malish 7]
Length = 334
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 69/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIGETTSNAVGESK 63
Query: 44 ----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
+L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I
Sbjct: 64 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 123
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW----- 131
+ V+ S + S + D R++ ++ + W
Sbjct: 124 DCSNEYKVIYSLQKLDIESLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSS 183
Query: 132 ----------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ Y E + N I+D D + P+ + LN IS
Sbjct: 184 HRVTEGEPPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 243
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ IG + KA+
Sbjct: 244 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNTIGVICSSYHNKAI 303
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 304 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 334
>gi|238650862|ref|YP_002916717.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic]
gi|238624960|gb|ACR47666.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic]
Length = 335
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 70/334 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-------LTLPYKIARGSA--------------- 43
LSN+ IK+ G ++ FLQ +IT D+ + YK RG+
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYK-ERGAKPIIIGETTSNAVGES 63
Query: 44 -----------ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-I 91
+L QG+ L F + + L+ID+S + +LI+ L FYK RS + +
Sbjct: 64 KSIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQV 123
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----------------DVLLHRTW---- 131
I+ V+ S + S + D R++ ++ + W
Sbjct: 124 IDCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWISWS 183
Query: 132 ----GHNEKIASDIK-------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
E S Y E + N I+D D + P+ + LN IS
Sbjct: 184 SHRVTEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISF 243
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA
Sbjct: 244 DKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKA 303
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A+ R +K + K +TV G+++ S WY
Sbjct: 304 IALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|296809796|ref|XP_002845236.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480]
gi|238842624|gb|EEQ32286.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480]
Length = 408
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 45/279 (16%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLI--- 57
+L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 HLTNRSLISLSGIDSTKFLQGLITRNLSVPNNSPPTTSPFYAAFLNSQGRILNDVFIYPQ 107
Query: 58 ---SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLSW 104
S +E +++E+D+ SL+ +KLRS + +G + ++
Sbjct: 108 TAASSPDEMEYLIEVDKEHSASLLKHFKRHKLRSKLKFRALDEGERSVWALWDDGNISTY 167
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-----------KTYHELRINHGI 153
++ SN++ I A + +R +K+ + I +TY RI G+
Sbjct: 168 HENEAISNNNAIACPDKRAPGMGYRLIASGDKLQTQIMEALPGDETSLQTYTLRRILQGV 227
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ T+ + P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ + G
Sbjct: 228 AEGQTEMARESALPMDSNVDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYGLG 287
Query: 212 DLPP-SGSPILTDDIEI-----GT------LGVVVGKKA 238
PP S SP+ D I GT +G V G+ A
Sbjct: 288 QSPPTSDSPVYEPDTNIILPSAGTEANISKVGTVKGRSA 326
>gi|126732783|ref|ZP_01748578.1| aminomethyl transferase family protein [Sagittula stellata E-37]
gi|126706779|gb|EBA05850.1| aminomethyl transferase family protein [Sagittula stellata E-37]
Length = 245
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 19/255 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+++ ++V G A FLQ ++T DV L + +A+LTPQGK F + ED I
Sbjct: 4 ESRTVLRVHGAKAREFLQGLVTNDVARLEKGLVY-AALLTPQGKYRADFFLVPDGEDVLI 62
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+++ + SL+ L YKLR+ V EI + VV T +F D R D
Sbjct: 63 -DVEVALAVSLMQALTMYKLRTPV--EITETDVVVTRGT--GTPPEGAFADPR----DPR 113
Query: 127 LHRTW-GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L W G+ + A + + LR+ + + P T F +A + LNG+ KGCY
Sbjct: 114 LG--WRGYAGQPAGEAD-WDALRVAACVPRAGVELTPDT-FILEAGFERLNGVDFKKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + D P G+ I+++ E GTL G A+A R D
Sbjct: 170 VGQEVTARMKHKTELRK-GLARVAIDGHAPIGTKIVSNGKEAGTLFTQSGDSAIAYLRFD 228
Query: 246 KVDHAIKKGMALTVH 260
+ + MA VH
Sbjct: 229 RAGDDM---MAGDVH 240
>gi|157818919|ref|NP_001102297.1| hypothetical protein LOC363611 [Rattus norvegicus]
gi|293351521|ref|XP_002727760.1| PREDICTED: hypothetical protein [Rattus norvegicus]
gi|149052766|gb|EDM04583.1| rCG34648 [Rattus norvegicus]
Length = 358
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57
L ++ ++V G A PFL ++T ++ T P A + L QG+ L ++
Sbjct: 53 LDGRALMRVRGPDASPFLLGLLTNELPLSGPPAGATQPSARAAYAHFLNVQGRTLYDVIV 112
Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ E T F+LE D S +L L YK+R V +E P V S
Sbjct: 113 YGLPECTEEAPGFLLECDSSVLGTLQKYLTMYKIRRKVAVEPHPELHVWAVLPCAPQTSE 172
Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156
++ ++ER +L+ RT ++ + D++ YH R GI +
Sbjct: 173 AAPLEERVEATTMLIRDPRTARMGWRLLTQDGGPAVVPRGQLGDLQDYHIYRYQQGIPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S
Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 292
Query: 217 G 217
G
Sbjct: 293 G 293
>gi|307109324|gb|EFN57562.1| hypothetical protein CHLNCDRAFT_143206 [Chlorella variabilis]
Length = 338
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 36/289 (12%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE---DT 64
++ IK+ G + +PFLQ I++ DV L P + +LT QG+ L + +E T
Sbjct: 42 RTVIKLEGSNLMPFLQRIVSNDVTQLAPGGPPLYACVLTAQGRFLHDLFLHAVEGADVPT 101
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ + D ++R L+D L Y L +V + V++ SS ER AD
Sbjct: 102 VLADCDAAQRRPLMDLLQHYSLHHSVSVSNAGKAYAVMAAFGGGIAGASS-APERAWAAD 160
Query: 125 ---------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+L R G + + Y R+ HG+ + +++ P + +D L
Sbjct: 161 PRLPALGRRAVLPR--GSAPAPTASWRDYRAWRMQHGVGEGDSEMPSGEANPLECNLDAL 218
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE----IGTLG 231
G+S KGCY+GQE V+R+ R ++RKR M PS + D E +G +
Sbjct: 219 RGLSFAKGCYVGQEGVARVHARGVVRKRLM---------PSHVFDVYDADESLSAVGRVR 269
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF-------PHWYK 273
VV G LA R+ + AI++ L V G+ + + P W++
Sbjct: 270 VVQGGLGLATIRLQQAMAAIREEKPLLVGGLEAGSGYAEIWPWRPEWWE 318
>gi|145356317|ref|XP_001422379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582621|gb|ABP00696.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 306
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 31/291 (10%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILL--YFLISKIE 61
+L ++ ++V G A FLQ +T DV L A A LTP+GKI + ++ E
Sbjct: 14 WLDTRAVVRVAGADAAAFLQGAVTNDVRALREGGDAAYCATLTPKGKIFADAFVRLAGSE 73
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DE 118
D F+L++DR K + L LR V IE + VV++ +S+ DE
Sbjct: 74 SDEFLLDVDREKSSEFLRALRMLSLRKRVTIEDANEHRVVVASADADVGDSSARAVRRDE 133
Query: 119 RF---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
R ++ + +A + RI G+ + ++ + P + D L
Sbjct: 134 RLEQLGFRGIVPASDAAWRDAVAD---AHARTRIALGVAEGASEL--ANALPLECNFDAL 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NG+S TKGCY+GQE +R + R ++RKR + P + +P + I + G VVG
Sbjct: 189 NGVSFTKGCYVGQENTARQRFRGVVRKRIAPFVAIE--PGARAPSVGGKI-VNERGDVVG 245
Query: 236 KKALAIARIDKVDHAIKKGMAL--------------TVHGVRVKASFPHWY 272
AI D V ++ M+ G RV P W+
Sbjct: 246 DVIAAIEDEDAVLGLVRARMSFIRAHVAGEPGSAFRIADGARVGVEPPSWW 296
>gi|84500029|ref|ZP_00998295.1| aminomethyl transferase family protein [Oceanicola batsensis
HTCC2597]
gi|84391963|gb|EAQ04231.1| aminomethyl transferase family protein [Oceanicola batsensis
HTCC2597]
Length = 251
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 19/253 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEED 63
+ + I+V G FLQ ++T D+ +++ G +A+LTPQGK++ FL+ + + +
Sbjct: 5 NERRVIRVGGSDTFDFLQNLVTNDL----DRLSEGPVYAALLTPQGKLIADFLVLQ-DGE 59
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
++++ + D L+ +L Y+LR++V IE I + D R
Sbjct: 60 ALLVDVAEAFADPLVQRLNMYRLRADVRIEPTGIK----VRRGTGAAPEGAVADPRHP-- 113
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
L R +G ++ D + +R+ I + + P T + +A D LNG+ KG
Sbjct: 114 -SLGWRLYGESD--GDDGTDFAAIRVAGVIPESGIELGPET-YILEAGFDRLNGVDFRKG 169
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
CY+GQEV +R++H+ +RK +I + P+G+ I + ++G L +A+A AR
Sbjct: 170 CYVGQEVTARMKHKTELRK-GLIRVDVEGAAPAGTEIEREGKKVGILYTQSDGQAIAYAR 228
Query: 244 IDKVDHAIKKGMA 256
D++ + G A
Sbjct: 229 FDRLAPGMTAGEA 241
>gi|189184098|ref|YP_001937883.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda]
gi|189180869|dbj|BAG40649.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda]
Length = 288
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 19/282 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
L+N++ +++ G A FL I T +V+ A+ S IL+PQG+ L +FLI+ +T
Sbjct: 7 LNNRAILELSGCDASNFLLRI-TTNVIPAANGEAKYSMILSPQGRFLFDFFLIN--NHNT 63
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSNSS--- 114
F ++ S +++L+ KL +KLRS V I ++ ++ S N H N++
Sbjct: 64 FFIDCLASIKNALLSKLHIFKLRSKVQINDVSDFYDIIYSQFYINDSNLHHLNLNTAKLV 123
Query: 115 --FIDERFS-IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+ D RF+ + LL + S+ Y + I D D + P +
Sbjct: 124 TQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPPEYG 183
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEIGT 229
D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +P++ + IG
Sbjct: 184 ADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPVMHNSNIIGY 243
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ +A+ R + I +TV ++K S P W
Sbjct: 244 WCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285
>gi|268564264|ref|XP_002639061.1| Hypothetical protein CBG14872 [Caenorhabditis briggsae]
gi|187027514|emb|CAP33284.1| hypothetical protein CBG_14872 [Caenorhabditis briggsae AF16]
Length = 281
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + D
Sbjct: 7 IKLPHRVILKLHGADTNAFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGTD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
LE ++ + L+ ++L Y+LR V EI V + Q T +S + D RFS
Sbjct: 67 DVFLECSKANQSVLVKEILKYRLRKRV--EISETTDQVF-FEQISTDKSSEYRDPRFS-- 121
Query: 124 DVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R +G+ + +++ + + Y LR ++GI + + + + P A DLLN +SL
Sbjct: 122 -NFGARVFGNPSSSEVSENREAYENLRRSNGIAEGAVEL--ADLLPFQANGDLLNMVSLD 178
Query: 182 KGCYIGQEVVSRIQHRNIIRKR 203
KGCYIGQE+ +R H +IR+R
Sbjct: 179 KGCYIGQELTARTAHTGVIRRR 200
>gi|86136583|ref|ZP_01055162.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
gi|85827457|gb|EAQ47653.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
Length = 266
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 29/256 (11%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTF 65
+ +++ G A FLQ +IT+DV KI +G +A+LTPQGK L F ++ ED
Sbjct: 26 RKILRLSGADARDFLQGLITSDV----NKIDQGLVYAALLTPQGKYLADFFLAADGED-I 80
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L+ D + ++L+ +L Y+LR+ V I +++ G + + D R +
Sbjct: 81 LLDADADQAEALMKRLTMYRLRAKVEITETDLKVKRGTGAA-------PAGALADPRHA- 132
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L R G ++ +D + L + H I + P + + ++ + LNG+ K
Sbjct: 133 --ELGWRLIG--SEVGADESDWDALHVAHCIPRSGIELGPDS-YILESGFEALNGVDFRK 187
Query: 183 GCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
GCY+GQEV +R++H+ +RK R + ITG+ P GS I +GT+ +A+A
Sbjct: 188 GCYVGQEVTARMKHKTELRKGLRVVEITGS---APVGSEITAGGKAVGTVFTQSNGQAIA 244
Query: 241 IARIDKVDHAIKKGMA 256
R D+ + G A
Sbjct: 245 YLRFDRAKGEMTAGDA 260
>gi|99081825|ref|YP_613979.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
gi|99038105|gb|ABF64717.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
Length = 248
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
++++ +++ G FLQ +++ DV K+ G +AILTPQGK L F ++ +
Sbjct: 1 MADRRILRLEGPDTRSFLQGLVSNDV----NKVQDGLVYAAILTPQGKYLADFFLA-ADG 55
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D +L++ + D L+ +L YKLR+NV +E + + D R
Sbjct: 56 DAVLLDVAEALADDLVKRLKMYKLRANVTLEETDLK----LRRGTGDAPEGALPDPRHP- 110
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L R +G ++ D + +R+ H I + + P + + + + LNG+ K
Sbjct: 111 --ALGWRQYG--KETFDDGSDWDVIRVTHVIPETGIELTPDS-YLLEVGFERLNGVDFRK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQEV +R++H+ +RK + D P G+ I +G + G KA+A
Sbjct: 166 GCYVGQEVTARMKHKTELRK-GLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYL 224
Query: 243 RIDKVDHAIK-KGMAL 257
R D+ A++ +G AL
Sbjct: 225 RFDRAKGALEAEGTAL 240
>gi|109017947|ref|XP_001083460.1| PREDICTED: putative transferase C1orf69, mitochondrial [Macaca
mulatta]
Length = 357
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 41/304 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--------ARGSAILTPQGK----ILL 53
L ++ ++V G A PFL ++T ++ A + L QG+ ++L
Sbjct: 53 LDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPLARAGYAHFLNVQGRTLYDVIL 112
Query: 54 YFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHT 109
Y L EE F+LE D S + +L L Y++R V +E P + V+ S
Sbjct: 113 YGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPS--SPEA 170
Query: 110 FSNSSFIDERFSIADVLLH---------RTWGHNEKIA-------SDIKTYHELRINHGI 153
+ N+ + E A +L+ R +E A D+ YH+ R G+
Sbjct: 171 YGNAP-LQESAGAAAILIRDPRTARMGWRLLTQDEGPALVSGGRLGDLWDYHQHRYLQGV 229
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L
Sbjct: 230 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 289
Query: 214 PPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P S G+ +LT + +G G LA+ +K+ + + V + AS
Sbjct: 290 PASGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 348
Query: 269 PHWY 272
P W+
Sbjct: 349 PDWW 352
>gi|126725874|ref|ZP_01741716.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150]
gi|126705078|gb|EBA04169.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150]
Length = 247
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTF 65
S Q F V G + FLQ+++T DV + +A+LTPQGK L +F+++ + D
Sbjct: 4 SRQVF-AVGGADRVKFLQSLVTNDVEKAKDGLVY-TALLTPQGKYLFDFFMVA--QGDRI 59
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+++ D + +L +L+ YKLR++V IE P++ V N + D R +
Sbjct: 60 LIDCDGEQAAALSGRLMMYKLRADVTIE--PLDLYVHRGND--LLPVDGYADPRHAALGW 115
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+R E+ A + + L I + + + + + + + + LNGI KGCY
Sbjct: 116 RAYR-----EQPAQETPDWTALNIANLVPETGAELVSGEGYILEMNFEALNGIDFRKGCY 170
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+++R++H+ +RK +T D G I + IG L G +ALA R D
Sbjct: 171 VGQEIMARMKHKTELRKGLARVT-VDGETSFGDEITSGGKVIGKLLTRAGDQALAYLRFD 229
Query: 246 KVDHAIK 252
++ I+
Sbjct: 230 RIKADIQ 236
>gi|148555647|ref|YP_001263229.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
gi|148500837|gb|ABQ69091.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
Length = 222
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS LS+++ I++ G+ A FLQ ++T+DV P + G +LTPQGK L F++
Sbjct: 1 MSGTTLSDRALIRLSGQGARDFLQGLVTSDVAG-PLPVWAG--LLTPQGKALFDFIVWA- 56
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++ + + D+L +L+ Y+LR + I G+ + W + D R
Sbjct: 57 DGDDLLIDCEAEQADALAKRLMLYRLRKPIAIARD--EGLAVHWAPD---GERGAPDPRL 111
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ L R W + A++ +H R G+ + + + DLLNG+S
Sbjct: 112 AA----LGRRWIASADGAAE--GWHAHRRALGVPEGVAEIGSDRNLWLECNADLLNGVSF 165
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207
KGCY+GQE +R+ R + +R +++
Sbjct: 166 AKGCYVGQENTARMNWRAKVNRRLVML 192
>gi|74192523|dbj|BAE43049.1| unnamed protein product [Mus musculus]
Length = 358
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57
L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++
Sbjct: 53 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 112
Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ E T F+LE D S +L L YK+R V +E P V S
Sbjct: 113 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 172
Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156
++ ++ER +L+ RT ++ + D++ YH+ R GI +
Sbjct: 173 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S
Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELAARTHHTGVIRKRLFPVKLEGPLPAS 292
Query: 217 G 217
G
Sbjct: 293 G 293
>gi|148675734|gb|EDL07681.1| RIKEN cDNA A230051G13 [Mus musculus]
Length = 370
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57
L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++
Sbjct: 65 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 124
Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ E T F+LE D S +L L YK+R V +E P V S
Sbjct: 125 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 184
Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156
++ ++ER +L+ RT ++ + D++ YH+ R GI +
Sbjct: 185 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 244
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S
Sbjct: 245 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 304
Query: 217 G 217
G
Sbjct: 305 G 305
>gi|30424663|ref|NP_776146.1| putative transferase C1orf69 homolog, mitochondrial precursor [Mus
musculus]
gi|81899610|sp|Q8CAK1|CAF17_MOUSE RecName: Full=Putative transferase CAF17 homolog, mitochondrial;
AltName: Full=Iron-sulfur cluster assembly factor
homolog; Flags: Precursor
gi|26332703|dbj|BAC30069.1| unnamed protein product [Mus musculus]
gi|63102308|gb|AAH94909.1| RIKEN cDNA A230051G13 gene [Mus musculus]
gi|74223337|dbj|BAE21556.1| unnamed protein product [Mus musculus]
gi|123262723|emb|CAM17098.1| novel protein (4930543L23Rik) [Mus musculus]
Length = 358
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIARGSA------ILTPQGKILLYFLI 57
L ++ ++V G A PFL + T ++ P A+ SA L QG+ L ++
Sbjct: 53 LDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLYDVIL 112
Query: 58 SKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ E T F+LE D S +L L YK+R V +E P V S
Sbjct: 113 YGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVPQTSE 172
Query: 113 SSFIDERFSIADVLLH--RTWGHNEKIAS--------------DIKTYHELRINHGIVDP 156
++ ++ER +L+ RT ++ + D++ YH+ R GI +
Sbjct: 173 TAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQGIPEG 232
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + LP S
Sbjct: 233 VCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGPLPAS 292
Query: 217 G 217
G
Sbjct: 293 G 293
>gi|322698390|gb|EFY90160.1| aminomethyl transferase, putative [Metarhizium acridum CQMa 102]
Length = 385
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGK----ILLYFL-- 56
L ++ + V G A FLQ I+TA++ LP A S +L G+ I +Y
Sbjct: 42 LPSRQLLSVSGPEATKFLQGIVTANMTNAEGLPRTDAFYSGLLNATGRVVHDIFIYPFRQ 101
Query: 57 ----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTF 110
+ ++D +++E D + L + YKLR+ V + P + V +W++
Sbjct: 102 GGSGLQAKQDDGYLIEADAGEVARLAQLIKRYKLRAKVTVRNVPPDEASVWQAWDEASPL 161
Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVDPNTDFL 161
++ S + R A L +R + K AS Y R HG+ + + L
Sbjct: 162 EIAASESRVVLRDPRAPGLGYRIVQLSHKAPELDVDASTEDAYTIRRYLHGVAEGQDEIL 221
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216
P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR P +I G D PP
Sbjct: 222 REQALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYGEDKAPPQ 278
>gi|254455916|ref|ZP_05069345.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082918|gb|EDZ60344.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus
Pelagibacter sp. HTCC7211]
Length = 297
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 28/297 (9%)
Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+ +VY L +++ + V G+ A FLQ +I+ DV + + +++L+PQGK L F+I K
Sbjct: 3 IKNVYILDDRAILYVNGEDAKEFLQNLISNDVNKVSDTNSCFTSLLSPQGKFLFEFIIIK 62
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---------------------EIQPIN 98
+ FI++ ++ + D L +L YKLRS V I E Q +
Sbjct: 63 -HKSGFIIDCEKPQADGLFKQLSIYKLRSKVEILNLSNEFVVAAFSHEKFLTFDEAQDVP 121
Query: 99 GVVLSWNQEHTFSN--SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
G L + ++ F + + + R I L+ + E S + Y+ GIV
Sbjct: 122 GFTLKYREDPIFLDPRNKQLGARLIINLEKLYLSLKKLELQDSKLHDYYSYCHKLGIVPK 181
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I
Sbjct: 182 DLNKLQNKLFGIECNYEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPINLVKGELTE 241
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
G I + EIG V+ +K A I D + + + +K P W K
Sbjct: 242 GESIYHKEKEIGK---VLIEKDYPFALIKFQDVNLSENIDFNTKDASIKIEKPDWIK 295
>gi|322707198|gb|EFY98777.1| aminomethyl transferase, putative [Metarhizium anisopliae ARSEF 23]
Length = 379
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGK----ILLYFLIS 58
L ++ + V G A FLQ IITA++ LP A S L G+ I +Y
Sbjct: 42 LPSRQLLSVSGPEATKFLQGIITANMTNAEGLPRTDAFYSGFLNATGRVVHDIFIYPFRQ 101
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTF---SNS 113
++D +++E D + + YKLR+ V + P + V +W+ ++
Sbjct: 102 AKQDDGYLIEADAGEMARFAKLIKRYKLRAKVTVRNVPPDEASVWQAWDDASPLDIAASE 161
Query: 114 SFIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
S + + A L HR N K AS + Y R G+ + + L P
Sbjct: 162 SRVVLKDPRAPGLGHRIVQLNHKAPELDVDASTEEAYTIRRYLQGVAEGQDEILREQALP 221
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216
++ M+L+NGI KGCY+GQE+ R +HR ++RKR P I D PP
Sbjct: 222 LESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCAIYSEDKAPPQ 272
>gi|209964961|ref|YP_002297876.1| aminomethyltransferase, putative [Rhodospirillum centenum SW]
gi|209958427|gb|ACI99063.1| aminomethyltransferase, putative [Rhodospirillum centenum SW]
Length = 298
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 22/290 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + + V G + FLQ +++ DV + A +A+LT QGK L F I+ +
Sbjct: 8 AVPLPQRGVLAVGGPDRVSFLQGLVSNDVARVTEGRAVWAALLTAQGKYLHDFCIAALG- 66
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLS---------WNQ 106
D +L+ + ++RD L+ +L Y+LR+ V +E + + G
Sbjct: 67 DALLLDCEAARRDDLLRRLRPYRLRAQVTLEDRTDTLAVSALVGTAAPAALELPAEPGAA 126
Query: 107 EHTFSNSSFIDERFSIADV--LLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161
++F+D R + + +L R G + R+ GI D + D +
Sbjct: 127 RTVAGGTAFVDPRHAALGLRLILPREGGATALAGFRQGGEADWDSARLALGIPDGSRDLV 186
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
P + D L G++ KGC++GQE+ +R ++R +IRKR + + LP G+P+
Sbjct: 187 PEKSILLENGFDELQGVAWDKGCWMGQELTARTRYRGLIRKRLLPVEVCGPLPEPGTPVF 246
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ E G + G + LA+ R+++V+ A +G++ + P W
Sbjct: 247 LGEREAGEMRSGHGGQGLALLRLEEVERAAAEGLSFRAGEATLSPRRPSW 296
>gi|110679047|ref|YP_682054.1| aminomethyl transferase family protein, putative [Roseobacter
denitrificans OCh 114]
gi|109455163|gb|ABG31368.1| aminomethyl transferase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 245
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I + D
Sbjct: 1 MTKRRILRLTGTDVSEFLQGLITNDIKGVETGLVY-AAMLTPQGKFLADFFICR-SGDAM 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ S D L+ +L YKLR++V IE ++ + D R
Sbjct: 59 LIDVAESHGDMLMQRLNMYKLRADVTIEATDLH----LHRGLGDPPEGAMADPRHP---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + D + LR+ H I + + P T F + + + G+ KGCY
Sbjct: 112 LGWRRYADAPQT-DDSTDWTALRVEHQIPEAGIELTPDT-FILEVGFERIAGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK ++ P G+ I + G L G +ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSIAGPAEP-GAEITANGKPAGVLHSRAGDRALAYLRYD 228
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 229 RATGPMQAGAA 239
>gi|73975454|ref|XP_539326.2| PREDICTED: similar to CG8043-PA [Canis familiaris]
Length = 276
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 104/254 (40%), Gaps = 31/254 (12%)
Query: 45 LTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------- 96
L P Y L E F+LE D + +L L YK+R V +E P
Sbjct: 23 LGPHQHCQPYGLPELDEAPAFLLECDSAVLGALQGHLALYKIRRKVKVEPCPELRVWAVL 82
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKT 143
G V W Q +N + I R + R E +A D++
Sbjct: 83 PSSPEDAGGAVPLWEQ----ANGATILTRDPRTACMGWRLLTQEEGLALVPRGQLGDLRD 138
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
YH R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR
Sbjct: 139 YHRHRYRQGVPEGIRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKR 198
Query: 204 PMIITGTDDLPPSG-SPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALT 258
+ + LP SG +P T +E G + G LA+ R +K+ + + +
Sbjct: 199 LFPVQLSGPLPASGITPGTTVLMESGQVAGKYRAGQGDVGLALLRSEKIRGPLHIRTSES 258
Query: 259 VHGVRVKASFPHWY 272
V V S P W+
Sbjct: 259 GQ-VAVTVSVPDWW 271
>gi|254487881|ref|ZP_05101086.1| glycine cleavage system T protein, aminomethyltransferase
[Roseobacter sp. GAI101]
gi|214044750|gb|EEB85388.1| glycine cleavage system T protein, aminomethyltransferase
[Roseobacter sp. GAI101]
Length = 247
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIE 61
++++ +K+ G + FLQ +IT D+ K+ +G +A+LTPQGK ++ +FL++ E
Sbjct: 1 MNDRRILKLTGADTLDFLQGLITNDI----RKLEQGPIYAALLTPQGKFMVDFFLVAAGE 56
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+L++ D+L+ +L Y+LR++V I + + + D R +
Sbjct: 57 --AVLLDVAEPFADALVQRLNMYRLRADVQIAATEL----YLHRSLGAAPDDGYSDPRDA 110
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+R ++ D + LR+ H I + + P + F + + LNG+
Sbjct: 111 QMGWRAYRDVPQSD----DTTDWDALRVAHSIPENGIELTPDS-FILEMGFERLNGVDFR 165
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV +R++H+ +RK I + P S G+ I D GT+ G ALA
Sbjct: 166 KGCYVGQEVTARMKHKTELRKGLAQINIS--APVSVGADITADGKPAGTVLTQSGTSALA 223
Query: 241 IARIDKVDHAIK 252
R D+ A++
Sbjct: 224 YLRFDRAKQAMQ 235
>gi|71985951|ref|NP_492346.2| hypothetical protein F39H2.3 [Caenorhabditis elegans]
gi|54110900|emb|CAB03089.2| C. elegans protein F39H2.3, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|54110919|emb|CAB03184.2| C. elegans protein F39H2.3, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 280
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ + D
Sbjct: 7 IKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQTQNGLAAFLLNTKGRIVEDVLLWRRGTD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
LE + + L ++L Y+LR V I + + + + E + D RFS
Sbjct: 67 DLFLECSKENKTILTKEILKYRLRKQVEI-TESSDQIFFT---EDVSDKQAHRDPRFSGF 122
Query: 124 DVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R +G+ + +++ + + Y LR + GI + + + + + P A DLLN +SL
Sbjct: 123 GA---RVFGNPSSSEVSENREKYENLRRSAGIAEGSQEL--AELLPFQANGDLLNMVSLD 177
Query: 182 KGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK--- 236
KGCY+GQE+ +R H +IR+R P G + G+ +L D + +G ++
Sbjct: 178 KGCYVGQELTARTAHTGVIRRRILPFECEGQVKI---GAEVL--DEKKNKVGKIISSDTT 232
Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ L I ++ K LT GV + A P W
Sbjct: 233 RCLGILQLSSF-----KSQKLTADGVSLTAKQPEW 262
>gi|114763433|ref|ZP_01442840.1| aminomethyl transferase family protein [Pelagibaca bermudensis
HTCC2601]
gi|114543971|gb|EAU46982.1| aminomethyl transferase family protein [Roseovarius sp. HTCC2601]
Length = 244
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTF 65
S + ++V G A FLQ ++T DV L + +A+LTPQGK +FL+ K E+
Sbjct: 3 SERKVLRVSGPEAEQFLQGLVTNDVAGLKDGLVY-AAMLTPQGKYRADFFLVPKGED--I 59
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++D + L L YKLRS V I ++ V E +FID R
Sbjct: 60 LIDVDAALAPDLQRMLTMYKLRSKVEI-VETDIAVTRGTGPE---PEGAFIDPRDP---- 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
W + + + LR+ + + + P T F +A + LNG+ KGCY
Sbjct: 112 --RMGWRGYDGQTGEEADWDALRVAACVPESGVELTPDT-FILEAGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
+GQEV +R++H+ +RK + ++G+ P GS IL + GTL +A R
Sbjct: 169 VGQEVTARMKHKTELRKGLAQVDVSGS---APVGSDILAGEKTAGTLYTQAEGHGIAYLR 225
Query: 244 IDKV 247
D+
Sbjct: 226 FDRA 229
>gi|163747204|ref|ZP_02154559.1| aminomethyl transferase family protein, putative [Oceanibulbus
indolifex HEL-45]
gi|161379479|gb|EDQ03893.1| aminomethyl transferase family protein, putative [Oceanibulbus
indolifex HEL-45]
Length = 248
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 28/250 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIE 61
++ + +++ G FLQ I+T D+ K+ +G +A+LTPQGK + +FLI+
Sbjct: 1 MTTRRILRLTGPDTRDFLQGIVTNDIA----KLDQGPVYAALLTPQGKYMADFFLIAA-- 54
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
D +L++D S D L +L YKLR+ V IE ++ H + + D +
Sbjct: 55 GDGVLLDVDESLGDMLTQRLSMYKLRAKVTIEPTELH--------LHRGTGPAPED---A 103
Query: 122 IADVLLHRTWG----HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+AD H G + D ++ LR+ H I + + P T F +A +D +NG
Sbjct: 104 VADPR-HPEMGWRAYRDTPQTDDTTDWNALRVAHLIPETGVELTPDT-FILEAGLDRING 161
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK + P G+ I + GTL +
Sbjct: 162 LDFRKGCYVGQEVTARMKHKTELRKGLTRVDVKGSAAP-GTAITAEGKPAGTLYTQADGQ 220
Query: 238 ALAIARIDKV 247
ALA R D+
Sbjct: 221 ALAHLRFDRA 230
>gi|126462652|ref|YP_001043766.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17029]
gi|126104316|gb|ABN76994.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17029]
Length = 255
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57
M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ FI DR D + +L Y+LR++V +I P++ V+ E + D
Sbjct: 59 VRTGGRLFIDISDRLA-DPTLKRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R L R +G + A ++ + +R+ H I + + +P + ++ + L+G
Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G +
Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227
Query: 238 ALAIARIDKVDHAIKKGMA 256
A+A R D+ + ++ G A
Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246
>gi|67906639|gb|AAY82733.1| hypothetical protein [uncultured bacterium eBACmed86H08]
Length = 295
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+ VY L +++ + + G + +LQ +I+ D+ + + +++L+PQGK L FL+ K
Sbjct: 3 LEKVYILDDRAILYINGPDSDKYLQNLISNDIEKVNENKSCFASLLSPQGKFLFDFLVLK 62
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+D + L+ ++ D L KL+ YKLRS V I VV +++ + S DE
Sbjct: 63 -HKDGYFLDCEKKIVDQLYKKLVMYKLRSKVEILNLSNEFVVAAFSYDKFLSIEGAKDE- 120
Query: 120 FSIADVLLHRTWGHNEK---------------IAS----------------DIKTYHELR 148
L T+ HNE IA+ I YH+L
Sbjct: 121 -------LGYTFKHNEDHVLLDPRNKKLGGRIIANLEKLYMSLKKMKLKSSKIDEYHKLS 173
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
GI N D L +F + LN I KGCY+GQE SRI++++ + KR + +
Sbjct: 174 FELGIPQSNMDQLQEKLFGIECNFVELNAIDFKKGCYVGQENTSRIKNKDKLNKRLLPLQ 233
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ PI+++++EIG + ++ + A+ + + K + +
Sbjct: 234 VKKGSISNNDPIISNNVEIGKV-LIANTFSFALIKFKNKEFEYNKEFKCGEANIEILK-- 290
Query: 269 PHW 271
P+W
Sbjct: 291 PNW 293
>gi|296537311|ref|ZP_06899188.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957]
gi|296262361|gb|EFH09109.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957]
Length = 362
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 5/226 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ ++V G+ + FLQ +++ DV A +A+LTPQGK L F I D
Sbjct: 85 LPDRAVLEVTGEDRLAFLQGLVSNDVTQAAPGRAVWAALLTPQGKWLADFFIVA-GADRL 143
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFSIAD 124
+L+ S+ +L +L ++LRS V I ++ V+ W + + D R A
Sbjct: 144 LLDTAASQAGALAQRLSRFRLRSRVAIALREDLAVLAGWGESLPPEGVLAAPDPRLPEAG 203
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
R + I Y R++ G+ D D P +A D L GIS +KGC
Sbjct: 204 ---WRAILNASAIPPGDGDYARHRLSLGLPDGAPDLEPEKSVLLEAGFDELGGISWSKGC 260
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
Y+GQE+ +R ++R ++++R + + LP G+P+L D +G +
Sbjct: 261 YMGQELTARTRYRGLLKRRLVPVAVEGPLPAPGTPVLRDGATVGEM 306
>gi|196002527|ref|XP_002111131.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens]
gi|190587082|gb|EDV27135.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens]
Length = 325
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 27/290 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EE 62
L +S +++ G A FLQ +IT D+ T + A + +L P+G+IL L+ K +E
Sbjct: 36 LLERSLLRISGPDAATFLQGLITNDINTT--EPASYAMLLNPKGRILYDILLYKNRNDDE 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER-FS 121
+ ++LE D ++ + FYKLRS V I + + + W + + + +F +E
Sbjct: 94 EYYLLECDVRVNTAIENHCKFYKLRSKVDI-VNVDQELAVWWAKYNDRESLAFKNEPILR 152
Query: 122 IADVLLHR--------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
D L + + N I + + Y + R+ GI + ++ + P
Sbjct: 153 TKDPRLQKLGERIIIPRHKNLSEYAQN-LINVNYQEYVDDRMKLGICEGVSEVITGESLP 211
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG--TDDLPPSGSPILTD 223
+ +D L+G+ KGCY+GQE+ +R H +IRKR P+I D+ GS +L D
Sbjct: 212 LEYNLDYLDGVKFDKGCYLGQELTARTYHTGVIRKRLMPVIFLNPIDDNAAFLGSTVLND 271
Query: 224 -DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ G L + GK +A+ RI + V + AS P W+
Sbjct: 272 KNKNCGKLRALSGKYGVALLRIADSLSGLLSVKTTNNTEVTLTASKPLWW 321
>gi|126335964|ref|XP_001376859.1| PREDICTED: similar to chromosome 1 open reading frame 69
[Monodelphis domestica]
Length = 357
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 50/310 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-------------QGK-- 50
L ++ ++V G FL ++T + LP + G A P QG+
Sbjct: 50 LRDRDALRVHGPDTESFLLGLVTNE---LPRPVPEGGATSEPAPAPAHYAHFLNVQGRTL 106
Query: 51 --ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++LY L EE F+LE+D S ++ + L YK+R V I P + Q
Sbjct: 107 YDVILYRLHEHQEEPHFLLEVDSSVSGAVQNHLKLYKIRRKVSISPCPDLSLWAVLPQTA 166
Query: 109 TFSNSSFIDERFSI---------ADVLLHRTWGHNEKIASDI---------KTYHELRIN 150
+++ + E+ A + R H E +A ++ + YH+ R
Sbjct: 167 AEASAKPLLEKGGKPLVLTPDPRAACMGWRLIIHKEDLAQEVIPKTQIRHSQDYHKHRYQ 226
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + D P P ++ + +NG+S TKGCYIGQE+ +R QH +IRKR I +
Sbjct: 227 KGIPEGVRDLPPGVALPLESNLTFMNGVSFTKGCYIGQELTARTQHMGVIRKRLFPIRFS 286
Query: 211 DDLP----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---V 262
LP +G+ +LT+ + G G +A+ R ++ IK + + G V
Sbjct: 287 APLPEEGISAGANVLTEAGKAAGKYRAREGDLGIALLRTER----IKGPLHIKTSGGQCV 342
Query: 263 RVKASFPHWY 272
+ S P W+
Sbjct: 343 SIIPSVPDWW 352
>gi|71083326|ref|YP_266045.1| GcvT-like aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062439|gb|AAZ21442.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
Length = 295
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 28/294 (9%)
Query: 2 SSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+VY L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K
Sbjct: 4 QNVYILEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIKH 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFI-- 116
+ FI + ++S+ ++L +L YKLRS V I VV ++N+E F S I
Sbjct: 64 KSGYFI-DCEKSQTEALFKQLSVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAG 122
Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
R I L+ + E S I Y++L GI N
Sbjct: 123 NTIKYREDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPIAEYYKLSHQLGIPQKN 182
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I +
Sbjct: 183 MNELQNKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQD 242
Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I D EIG V+ A I +D + ++K P W
Sbjct: 243 DLIYNGDFEIGK---VLISNEYPFALIKYLDDNFNQENEFKSKNAKLKIKIPSW 293
>gi|163734033|ref|ZP_02141474.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
gi|161392569|gb|EDQ16897.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
Length = 245
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I K D
Sbjct: 1 MTKRRILRLTGTDVTEFLQGLITNDIKGVETGLVY-AAMLTPQGKYLADFFICK-SGDAI 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDERFSI 122
++++ S D L +L YKLR++V IE ++ G+ + D R
Sbjct: 59 LIDVAESHGDMLAQRLSMYKLRADVSIETTDLHLHRGI-------GDPPAGALPDPRHP- 110
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L R + + + LR+ H I + + P T F + + + G+ K
Sbjct: 111 --ALGWRCYADTPQTDD-TTDWTALRVAHQIPETGIELTPDT-FILEVGFERIAGVDFRK 166
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQEV +R++H+ +RK ++ T P G+ I + +G L G KALA
Sbjct: 167 GCYVGQEVTARMKHKTELRKGLAQVSITGPAEP-GAEITANGKAVGVLQSRAGDKALAYL 225
Query: 243 RIDKVDHAIKKGMA 256
R D+ ++ G A
Sbjct: 226 RYDRATGPMQAGAA 239
>gi|77463816|ref|YP_353320.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides
2.4.1]
gi|77388234|gb|ABA79419.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides
2.4.1]
Length = 255
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57
M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ FI DR D + +L Y+LR++V +I P++ V+ E + D
Sbjct: 59 VRTGGRLFIDISDRLA-DPTLKRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R L R +G + A ++ + +R+ H I + + +P + ++ + L+G
Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G +
Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227
Query: 238 ALAIARIDKVDHAIKKGMA 256
A+A R D+ + ++ G A
Sbjct: 228 AIAHVRHDRAEGEMRAGEA 246
>gi|332558691|ref|ZP_08413013.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N]
gi|332276403|gb|EGJ21718.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N]
Length = 255
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57
M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ FI DR +L +L Y+LR++V +I P++ V+ E + D
Sbjct: 59 VRTGGRLFIDISDRLAEPTL-KRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALRD 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R L R +G + A ++ + +R+ H I + + +P + ++ + L+G
Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G +
Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227
Query: 238 ALAIARIDKVDHAIKKGMA 256
A+A R D+ + ++ G A
Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246
>gi|194740816|ref|XP_001952886.1| GF17494 [Drosophila ananassae]
gi|190625945|gb|EDV41469.1| GF17494 [Drosophila ananassae]
Length = 281
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 109/258 (42%), Gaps = 37/258 (14%)
Query: 44 ILTPQGKILLYFLISKIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL 102
L G++L +I + DTF++E DR L Y++R + I+I ++
Sbjct: 18 FLNKSGRVLYDTIIYRTNNRDTFLVECDREASAEFRRHLRTYRVRKS--IDIDSVDDEYS 75
Query: 103 SW-------NQEHTFSNSSFI---DERFSIADV------------LLHRTWGHNE---KI 137
+W T N D R S L+ W +NE
Sbjct: 76 TWVMFSPKSEPVPTSPNPDLFVSPDARLSSLGTRILAPTDMNWSQLVKGYWRNNEFSASP 135
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
AS+ Y LR G+ + + + P FP +A D L+G+S KGCY+GQE+ +RI H
Sbjct: 136 ASEECNYQLLRYEQGVGEGSLELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARIHHS 195
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG---KKALAIARIDKVDHAIKKG 254
+IRKR M I T P GS + LG V G + +A+ RI++V +
Sbjct: 196 GVIRKRYMPIRLT---APIGSNKDVTSVAGAKLGRVCGSAHNRGVALLRIEQV---LNGR 249
Query: 255 MALTVHGVRVKASFPHWY 272
L V G R A P W+
Sbjct: 250 QELMVDGERCYADRPQWW 267
>gi|91762244|ref|ZP_01264209.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718046|gb|EAS84696.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 295
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 28/294 (9%)
Query: 2 SSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+VY L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K
Sbjct: 4 QNVYILEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIKH 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFI-- 116
+ FI + ++S+ ++L +L YKLRS V I VV ++N+E F S I
Sbjct: 64 KSGYFI-DCEKSQTEALFKQLGVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAG 122
Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
R I L+ + E S I Y++L GI N
Sbjct: 123 NTIKYREDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPITEYYKLSHQLGIPQKN 182
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ L + +F + + LNGI KGCY+GQE +RI+ +N + KR + I +
Sbjct: 183 MNELQNKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQD 242
Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I D EIG V+ A I +D + ++K P W
Sbjct: 243 DLIYNGDFEIGK---VLISNEYPFALIKYLDDNFNQENEFKSKNAKLKIKIPSW 293
>gi|221639671|ref|YP_002525933.1| glycine cleavage T protein [Rhodobacter sphaeroides KD131]
gi|221160452|gb|ACM01432.1| Glycine cleavage T protein [Rhodobacter sphaeroides KD131]
Length = 255
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 16/259 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLI 57
M +++ ++ GK + FLQ +++ DV P + A G +A+L+PQGK L F +
Sbjct: 1 MPGEIATDRKLWEISGKDGLHFLQGLVSNDVR--PLETADGIVWAALLSPQGKYLADFFV 58
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ FI DR +L +L Y+LR++V +I P++ V+ E + D
Sbjct: 59 VRTGGRLFIDISDRLAEPTL-KRLTMYRLRADV--QIAPLDLSVVRGLGEA--PAGALPD 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R L R +G + A ++ + +R+ H I + + +P + ++ + L+G
Sbjct: 114 PRHP---ALGWRGYGMDGG-APEVD-WDAIRVAHLIPESGLELVPDDSYLLESGFERLHG 168
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEV +R++H+ +RK ++ G+ I D GTL G +
Sbjct: 169 VDFRKGCYVGQEVTARMKHKTELRK-GLVRVRISGEAAFGAEITADGKPAGTLFTRSGDR 227
Query: 238 ALAIARIDKVDHAIKKGMA 256
A+A R D+ + ++ G A
Sbjct: 228 AIAYVRHDRAEGEMRAGEA 246
>gi|119713296|gb|ABL97361.1| putative aminomethyltransferase [uncultured marine bacterium
HF10_45G01]
Length = 296
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+ +VY L++++ + + G+ A FLQ +I+ D+ + + S++LTPQGK L F+I K
Sbjct: 3 IKNVYILNDRAILYINGEDAKEFLQNLISNDLNKVSDAYSCFSSLLTPQGKFLYEFIIVK 62
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--- 114
+ ++L+ ++ + + L +L YKLRS V I VV +++ E TF +
Sbjct: 63 -HKSGYLLDCEKPQAEELFTQLSLYKLRSKVEILNLSNEFVVAAFSHEKFLTFDTAKDQS 121
Query: 115 -----------FIDERFSIAD----VLLHRTWGHNEKIA---SDIKTYHELRINHGIVDP 156
F+D R + L + + +K+ +++K Y+ L + GIV
Sbjct: 122 GFTIKYREDPIFLDPRNKQLGARLIINLEKLYLSLKKLNLHDANLKEYYSLSHSLGIVPK 181
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + L +F + + LNGI KGCY+GQE +RI+ +N + KR I
Sbjct: 182 DLNKLKEKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLFPINVISGKLHE 241
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
G I +++EIG V+ A I ++ + + + P W K
Sbjct: 242 GESIYNNEVEIGK---VLIDSDYPFALIKYLNENFDEKANFKTKEASINVNKPDWIK 295
>gi|40063600|gb|AAR38389.1| glycine cleavage system T protein [uncultured marine bacterium 582]
Length = 252
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
Y ++ ++ G FLQ ++T DV P + SAILTPQGK + F + + +E
Sbjct: 3 YTRDRHIFEIRGHDRAGFLQGLVTNDVSQTPQALTY-SAILTPQGKFITDFFLFQ-DEKA 60
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+++ S +L +L YKLR+ V I+ P+ V + S D
Sbjct: 61 IYMDVADSAAPALSTRLNMYKLRAEVTIDDSPLK-VFCGTGSAPQGAKSDPRDRS----- 114
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R +G E+ D + LR+ I + + + + L+G+ KGC
Sbjct: 115 -LGWRLYG--ERSGDDGSDWTALRVAACIPAVTIELTADSYILENGF-ERLHGVDFKKGC 170
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y+GQE+ +R++H+ +RK + D P+G+ I+ D +G L G LA R
Sbjct: 171 YVGQEITARMKHKATLRK-GLAQVRVDGKAPTGTDIVADGKNVGVLYSQSGGLGLAYLRF 229
Query: 245 DKVDHAIKKGMA 256
D+ ++ A
Sbjct: 230 DRATDKMQAASA 241
>gi|157110240|ref|XP_001651016.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti]
gi|157110242|ref|XP_001651017.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti]
gi|108878785|gb|EAT43010.1| conserved hypothetical protein [Aedes aegypti]
gi|108878786|gb|EAT43011.1| conserved hypothetical protein [Aedes aegypti]
Length = 341
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 133/312 (42%), Gaps = 60/312 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-----ILTPQGKILLYFLISKI 60
L ++S + V G A+PFLQ +IT D+ L RGS L G++L LI ++
Sbjct: 37 LESRSILGVRGSDAVPFLQGLITNDMNHL----LRGSTSMYAMFLNTSGRVLYDSLIYRV 92
Query: 61 EEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--- 114
+E F++E D S + L L +++R V I + V Q T S
Sbjct: 93 DEKVGQHFLVECDTSVVEQLAKHLNLFRVRKKVEITKTDMKIWVAFTAQNSTHDQSPKIA 152
Query: 115 -----------FIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------ELRIN 150
F D R L +R ++ + +D+KT+ + R +
Sbjct: 153 LKKADINGTLIFKDARLP---ELGYRLLTNSSTVLNDLKTHFSDEIDSPQNGSFVQHRYS 209
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208
GI + + P FP + D L+G+S KGCYIGQE+ +R H +IRKR P+I
Sbjct: 210 LGIGEGVINLPPGKCFPLENNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPLIFD 269
Query: 209 GTDDLPPSGSPILTDDIEIGTL-GVVVGKK-------ALAIARIDKVDHAIKKGMALTVH 260
P +L +D EI T+ G VGK L + RI+KV I + + +
Sbjct: 270 -----QPVDCGLLPEDAEIKTMEGQTVGKLRGYHKTFGLGLLRIEKV---ISSQLMIAGN 321
Query: 261 GVRVKASFPHWY 272
K P W+
Sbjct: 322 TYHCKTFKPDWW 333
>gi|321463826|gb|EFX74839.1| hypothetical protein DAPPUDRAFT_199709 [Daphnia pulex]
Length = 326
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLI-SKIEE 62
L ++ +KV G A P+LQ ++T D+ L L QG+IL +I S E
Sbjct: 32 LKGRAIVKVSGVDAGPYLQGLMTNDIKHLDEDNNPNMYCMFLNRQGRILYDAIIHSSKES 91
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFS 121
++++E D +SL L +++R V+I I+ + VL SN +
Sbjct: 92 GSYLIECDAECSESLAKHLTMFRVRRKVVISIEETLKPWVLFDQPPEDLSNEVILARDPR 151
Query: 122 IADVLLHRTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ ++ N+ ++ IK Y ELR G+ + + D P T FP + D
Sbjct: 152 VKELGWRVLVDSNKSLSHLIKNLCVDNTDRYTELRYKLGVGEGSPDMPPGTCFPLECNCD 211
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L+G+S KGCY+GQE+ +R H + RKR M +
Sbjct: 212 YLHGVSFHKGCYLGQELTARTYHTGVTRKRLMPV 245
>gi|212533241|ref|XP_002146777.1| aminomethyl transferase, putative [Penicillium marneffei ATCC
18224]
gi|210072141|gb|EEA26230.1| aminomethyl transferase, putative [Penicillium marneffei ATCC
18224]
Length = 457
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 61/293 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT------LPYKIARGSAILTPQGKIL---LYFL 56
L+N+S I + G + FLQ +IT ++L P +I SA L QG++L +
Sbjct: 51 LTNRSLIAISGADSTSFLQGMITQNMLMGKEPVRAPRRIGTYSAFLNSQGRVLHDVFIYP 110
Query: 57 ISK---------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
I+K +E +++E+D+S+ +L+ L +KLR+ + + + V +WN
Sbjct: 111 ITKGSLGHTNDSTDEAAWLIEVDKSEVTNLMKHLKKHKLRAKLTLRALEEGEQSVWAAWN 170
Query: 106 Q------------EHTF-----SNSSF----IDERF----------SIADVLLHRTWGHN 134
+ E F N SF ID R D+ +H +
Sbjct: 171 ESAERPRWAAYNLESDFPSQLSDNESFVVGCIDTRAPGFGTRYVTPGAEDLQVHLS-EET 229
Query: 135 EKIASDI--KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+ + S++ +TY RI HG+ + + + + P + MD+ I KGCY+GQE+
Sbjct: 230 KILGSEVGLETYKLRRILHGVAEGQQEIIRESSLPMECNMDVSQAIDFRKGCYVGQELTI 289
Query: 193 RIQHRNIIRKR--PMIITGTDD--LPPSGSPILTD---DIEIGTLGVVVGKKA 238
R H ++RKR PM + G D+ L S S ++ D DI G + +KA
Sbjct: 290 RTHHTGVVRKRILPMQLYGIDENTLTSSASALIYDPSTDIPQPPTGANISQKA 342
>gi|156540479|ref|XP_001600004.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
vitripennis]
Length = 365
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 58/323 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKI 60
S V L ++ +++ G FLQ +IT D+ L A S L +G++L +I K
Sbjct: 33 SLVQLDQRTLLRLSGDQVSDFLQGLITNDMRHLKEGAASIYSVFLNIKGRVLYDAIIYKT 92
Query: 61 E-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------NQEH 108
+ E F +E D S +SL L YKLR V EI + + W +Q+
Sbjct: 93 QDEKVFYVECDSSIVNSLSKHLKMYKLRRKV--EIHTEDNSMKVWTAYDPDIVSHVDQKE 150
Query: 109 TFSNSSF-----------------IDERFSIAD---------VLLHRTWGHNEKI----- 137
S+F +D F +D +L T +E I
Sbjct: 151 VEKKSNFEGKIFPCGASDSTSSKLVDNIFIYSDPRLYQLGLRILTQSTVTCDEIIKQLEP 210
Query: 138 ----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ +Y E R G+ + D P T FP + D L+G+S KGCYIGQE+ +R
Sbjct: 211 NVTTQQNASSYREFRYKLGVGEGVQDLPPGTSFPLEINCDYLHGVSFHKGCYIGQELTAR 270
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDH 249
H ++RKR M ++ D + P++ DD G +VGK K + + ++
Sbjct: 271 THHTGVVRKRLMPLS-FDKVYE--KPLMYDDQITNEAGKIVGKIRGQKGIFGLGLIRIAD 327
Query: 250 AIKKGMALTVHGVRVKASFPHWY 272
A+ + LTV +K PHW+
Sbjct: 328 ALASKI-LTVGDCTLKVVKPHWW 349
>gi|294678627|ref|YP_003579242.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003]
gi|294477447|gb|ADE86835.1| glycine cleavage T protein-2 [Rhodobacter capsulatus SB 1003]
Length = 247
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILL-YFLISKIEEDTFILEI 69
+ G+ FLQ +++ D+ ++A G +A+LTPQGK L +FLI++ E +L+I
Sbjct: 7 ITGQDREHFLQGLVSNDL----RRLAEGPLYAALLTPQGKYLADFFLIARGE--AILLDI 60
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ + ++ + +L Y+LR++V I ++ + + D R H
Sbjct: 61 EAAIAEATVARLNMYRLRADVAIAPSALS----VFCGTGPAPEGALSDPR--------HP 108
Query: 130 TWG---HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
G + ++ D + LR+ H I + P T + +A + L+G+ KGCY+
Sbjct: 109 ELGWRLYGDRDGDDGSDWDALRVAHLIPATGIELTPET-YILEAGFERLHGVDFRKGCYV 167
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
GQEV +R++H+ +RK ++ P G+PI +GTL G KALA R+D
Sbjct: 168 GQEVTARMKHKTELRK-GLVQLAISGAAPVGTPIGAGGKTVGTLYTQSGGKALAQLRLDA 226
Query: 247 VDHAIKKGMA 256
++ ++ G A
Sbjct: 227 LEGPMQAGEA 236
>gi|46125843|ref|XP_387475.1| hypothetical protein FG07299.1 [Gibberella zeae PH-1]
Length = 396
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLIS---- 58
L+++ I V G + FLQ IITA+V T LP A LT G++L +
Sbjct: 47 LTSRRLISVTGPDSAKFLQGIITANVTTKDGLPRTDGFYGAFLTATGRVLYDVFVYPNHN 106
Query: 59 ----KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVL 102
EE +++E+D +L + YKLR+ + + + NG
Sbjct: 107 SPGFSSEEPAYLIEVDAGHAPTLAKHIKRYKLRAKLTVRLLGEDEASVWHAWDDSNGA-- 164
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHR--TWGHNEKIASDIKTYHEL----RINHGIVDP 156
+W+ +N S D R A L +R N KT E R +GI +
Sbjct: 165 NWDSIVKLTNLSLQDPR---APGLGYRLLQLDQNTPQVDLEKTTEEAYTIRRYINGIAEG 221
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214
+ P + MD++NGI KGCY+GQE+ R +HR ++RKR P +I T+ P
Sbjct: 222 QDEISKEHALPQETNMDIMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYETEHAP 281
Query: 215 PS 216
P+
Sbjct: 282 PT 283
>gi|291241889|ref|XP_002740842.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 369
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKI---- 60
L N++ I+V G+ A LQ +IT D L + + + +L QG++L +I I
Sbjct: 54 LINRNIIRVSGRDASDLLQGLITNDASLLTRQNPSLYTMLLNQQGRVLYDAIIYGIYKEG 113
Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SSF 115
+E +++E + L + +K+R V +I ++ W F +S
Sbjct: 114 NDEAVYLVECENELAPELQKHMKMFKIRKKV--DILNVSSEYEVWAAYEVFGKVDYPTSM 171
Query: 116 IDERFSIADVLLHRTWGH------NEKIAS--------DIKTYHELRINHGIVDPNTDFL 161
++E +AD L T+G N + D+ YH R HGI + + D
Sbjct: 172 VNESICVADPRL-STFGRRLVVPKNTNLPELIPGLTEMDVHNYHTHRYIHGICEGSNDLP 230
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
P ++ +D +NG+S KGCY+GQE+ +R H +IRKR M +T T+
Sbjct: 231 VGNALPLESNLDYMNGVSFHKGCYLGQELTARTHHTGVIRKRLMPVTLTN 280
>gi|156386911|ref|XP_001634154.1| predicted protein [Nematostella vectensis]
gi|156221234|gb|EDO42091.1| predicted protein [Nematostella vectensis]
Length = 330
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 46/273 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA--------ILTPQGKILLYFLI 57
L + ++V G ++ FLQ ++T ++ ++ G + L QG++L ++
Sbjct: 36 LDKRCILRVSGPDSVKFLQGLVTNNI-----ELFHGDSTIRSMYTMFLNAQGRVLYDAIL 90
Query: 58 SK----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
SK E +F +E DRS +L L F+KLRS +I G+V W T +
Sbjct: 91 SKDKTHSETPSFFIECDRSISAALTKHLKFFKLRSKA--DISHAEGLV-PW----TVFSE 143
Query: 114 SFID-------ERFSIADVLLHRTWGHNEKIASDIK--------------TYHELRINHG 152
+D + FSI + GH + SD Y E R G
Sbjct: 144 EIVDLKPEEDWKDFSIVPDPRVKKLGHRLILPSDTDPSACIEGAGHAPRGAYEEHRARLG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + + P + +D LNG+S KGCYIGQE+ +R H +IRKR M T +
Sbjct: 204 VCEGEEEIPIANAMPLEYNLDFLNGVSFHKGCYIGQELTARTHHTGVIRKRIMPFTIASN 263
Query: 213 LPPSGSPILTDDIEI-GTLGVVVGKKALAIARI 244
SG+ I T+ + G + +V G+ L + R+
Sbjct: 264 NISSGAAIKTEAGKASGKVCIVHGQYGLGMIRL 296
>gi|302916931|ref|XP_003052276.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI
77-13-4]
gi|256733215|gb|EEU46563.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI
77-13-4]
Length = 389
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLI----- 57
L+++ I + G A FLQ I+TA+V P K +A LT G++L +
Sbjct: 47 LTSRRLISIAGPDAAKFLQGIVTANVSAADGEPRKDGFYTAFLTATGRVLYDVFVYPNHG 106
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSF 115
+ EE F++E+D + L + YKLR+ + + + + V +W+ + S
Sbjct: 107 ASAEEPGFLIEVDADQAKMLAKHIKRYKLRAKLAVRLLGEDEASVWHAWDDSKGTNWDSI 166
Query: 116 IDE-RFSIAD----------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+++ + ++ D V L + + S Y R HG+ + +
Sbjct: 167 VNQTKLTLQDPRAPGLGCRFVRLDQNTPEIDLERSTEDAYTIRRYLHGVPEGQDEISREH 226
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216
P + MD++NGI KGCY+GQE+ R +HR ++RKR P +I + P+
Sbjct: 227 ALPQETNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCVIYEKEHAAPT 280
>gi|260797653|ref|XP_002593816.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae]
gi|229279046|gb|EEN49827.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae]
Length = 441
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 27/292 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE 61
V L +S ++V G IPFLQ ++T DV +L + A + IL QG++L L+ ++
Sbjct: 148 CVRLEERSLVRVAGSDTIPFLQGLVTNDVTSLNTENRALYTMILNVQGRVLYDVLMYNLQ 207
Query: 62 ED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ +LE D + SLI L YK+R V +I + W S+
Sbjct: 208 SSPTSPPSLLLECDHTVVPSLIKLLKMYKIRKKV--DICSVADEYTVWALLPGTSDPPVF 265
Query: 117 --DERFSIAD----------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
D S+ D VL T + + YH R G+ + D
Sbjct: 266 VSDTGLSVTDPRLPDLGNRVVLKSGTNLVFDCVEGTSTDYHTHRYQLGVGEGVNDLPTGN 325
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILT 222
P ++ + +LNG+S KGCY+GQE+ +R H +IRKR P+I+ L +
Sbjct: 326 CTPLESNLAILNGVSFDKGCYVGQELTARTHHTGVIRKRLMPIILDRPASLEAGSTLTNE 385
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272
+G G +A+ R+ H+ +K G V +KA P W+
Sbjct: 386 KGKNVGKFRHAQGVHGIALVRL---AHSQEKLYCKQESGEEVGLKAETPKWW 434
>gi|56696136|ref|YP_166492.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
gi|56677873|gb|AAV94539.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
Length = 244
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ ++ +++ G FLQ +++ D+ L + +A+LTPQGK L F + + +++
Sbjct: 1 MPSRRILRLSGADTDSFLQGLVSNDIRKLDQGLVY-AALLTPQGKYLADFFLCR-DDEGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L+I S D+ + +L YKLR+ V I +N + D R
Sbjct: 59 LLDIAESLADATLKRLSMYKLRAAVEIGDSGLN----LQRGTGPAPAGALPDPR------ 108
Query: 126 LLHRTWGHNEKI----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
H T G + D + +R+ H I + + P + + LNG+
Sbjct: 109 --HPTLGWRAYTPAPESDDGSDWDAIRVAHCIPETGIELTPDSYLLESGF-EALNGLDFR 165
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGCY+GQEV +R++H+ +RK + + G+ I D +G L G A+A
Sbjct: 166 KGCYVGQEVTARMKHKTELRK-GLARVAIEGAAEPGTEITADGKPVGVLHTRAGDHAIAY 224
Query: 242 ARIDKVDHAIKKGMA 256
R D+ + G A
Sbjct: 225 LRFDRAGGEMSAGEA 239
>gi|310816646|ref|YP_003964610.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare
Y25]
gi|308755381|gb|ADO43310.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare
Y25]
Length = 246
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 21/247 (8%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGS----AILTPQGKILLYFLISKIEEDTFILEI 69
+ G +PFLQ ++T DV K A G+ A+LTPQGK + F + + + +L++
Sbjct: 10 ITGTDRLPFLQNLVTNDV-----KRAEGALVYTALLTPQGKFIADFFLHE-DGSRLLLDV 63
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
D +LI +L Y+LR++V +I + VV + + D R L R
Sbjct: 64 DAGAAAALIPRLSMYRLRADV--QIAETDLVVSRGTGDA--PAGALADPRDP---RLGWR 116
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+G + SD + LR++ + + + + + + L+G+ KGCY+GQE
Sbjct: 117 LYGAAD--VSDATDWDALRVDLLVPEMGAELTGESYILENGF-ERLHGVDFRKGCYVGQE 173
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249
V +R++H+ +RK + D P G+ I+ D E G L G +A+A R D+
Sbjct: 174 VTARMKHKTELRKGLARVQVVGDAAP-GTVIMAGDREAGQLLTRAGDQAIAYLRFDRAGG 232
Query: 250 AIKKGMA 256
+ G A
Sbjct: 233 EMTAGSA 239
>gi|89055962|ref|YP_511413.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia
sp. CCS1]
gi|88865511|gb|ABD56388.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia
sp. CCS1]
Length = 247
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILL-YFLISKIEEDT 64
+++ +++ G A FLQ ++T D L Y SA+LTPQGK L +FL+ + D
Sbjct: 7 EDRTILRLSGADAHGFLQGLVTRDAGEGLTY-----SALLTPQGKYLADFFLLDR--GDD 59
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L++ ++ +L Y+LR++V IE + V +F D R
Sbjct: 60 ILLDVKSDIARAVAQRLGMYRLRADVTIEEADLP-VARGLGD---MPAGAFADPRDP--- 112
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R +G + + LR+ + + + P+ + +A D L G+ KGC
Sbjct: 113 SLGWRAYGVAG--GDPVTDWTALRVAACVPETGVELTPNDTYILEAGFDRLCGVDHKKGC 170
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y+GQEV +R++H+ + K+ + D P G+ I+ + GTL G + +A R
Sbjct: 171 YLGQEVTARMKHKTEL-KKGFVTVSVDGTAPVGTAIMAGEKPAGTLYTQAGGQGIAYLRF 229
Query: 245 DKV 247
D+
Sbjct: 230 DRA 232
>gi|171686930|ref|XP_001908406.1| hypothetical protein [Podospora anserina S mat+]
gi|170943426|emb|CAP69079.1| unnamed protein product [Podospora anserina S mat+]
Length = 425
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYF--LISK 59
L ++S I + G A FL+ IIT ++ T P + +A L+ QG+IL +Y ++
Sbjct: 89 LPSRSLISLSGPDAAKFLRGIITNELPTTPSTLTY-AAFLSAQGRILNDVFIYLDPRLTS 147
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSS--- 114
D+F++E+ + +L+ L YKLRS I + P V+ W +
Sbjct: 148 SPPDSFLIEVSTLEAATLVKHLKRYKLRSKCAIALLPQEEASVIAVWGSPDSIPAQGESL 207
Query: 115 --FIDER---FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
D R + VL + ++ S+ + Y LR +G+ + + + PH+
Sbjct: 208 RYCPDPRVPSWQRGLVLGGGSGLEGVQMQSE-EVYTLLRYANGVAEGQEEIVRDGGLPHE 266
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +DLL G+ KGCY+GQE+ R +HR ++RKR
Sbjct: 267 SNLDLLGGVDFRKGCYVGQELTIRTEHRGVVRKR 300
>gi|307294356|ref|ZP_07574200.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1]
gi|306880507|gb|EFN11724.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1]
Length = 245
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++
Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKPGEPRWTALLTPQGKALFDFILWAD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+D I + + ++ D+L +L Y+LR V I + + + W E + +D R
Sbjct: 61 GDDVLI-DCEAAQADALAKRLTIYRLRRKVAIARE--ESLAVHWALE---AADKPLDPRL 114
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L HR W + R+ G+ + + I + L G+
Sbjct: 115 P---ALGHR-WIAPADGGDAAAAFRAHRLALGVFEGAGELGQDQILWLETNAGELGGVDY 170
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203
KGCY+GQE +R+ +RN + +R
Sbjct: 171 DKGCYVGQENTARMHYRNKVSRR 193
>gi|326472590|gb|EGD96599.1| aminomethyl transferase [Trichophyton tonsurans CBS 112818]
Length = 408
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 42/260 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57
L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I
Sbjct: 49 LNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104
Query: 58 SKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------QPINGVV 101
E E +++E+D+ + L+ +KLRS + +G
Sbjct: 105 YPFETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNT 164
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-----------KTYHELRIN 150
W++ F S+ I S A + +R +K+ S I + Y R+
Sbjct: 165 SGWHENDVFKESNAIICPDSRAPGMGYRVIASGDKLPSRITEAFPGDETSFEAYTLRRML 224
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208
G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ +
Sbjct: 225 QGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLY 284
Query: 209 GTDDLPPSGS-PILTDDIEI 227
+ PP+ P+ D I
Sbjct: 285 ESTQAPPTSDIPVYDPDTSI 304
>gi|327298835|ref|XP_003234111.1| aminomethyl transferase [Trichophyton rubrum CBS 118892]
gi|326464289|gb|EGD89742.1| aminomethyl transferase [Trichophyton rubrum CBS 118892]
Length = 409
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56
+L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103
Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99
I E E +++E+D+ + L+ +KLRS + + I +G
Sbjct: 104 IYPFETASSPAGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148
+W++ F ++ I A + +R K+ S I+ Y R
Sbjct: 164 NTSAWHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRR 223
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 224 MLRGVGEGQVEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283
Query: 209 ---GTDDLPPSGSPILTDDIEI 227
T LP S P+ D I
Sbjct: 284 LYKSTKTLPTSDMPVYDPDTSI 305
>gi|302497401|ref|XP_003010701.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371]
gi|291174244|gb|EFE30061.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371]
Length = 409
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56
+L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103
Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99
I E E +++E+D+ + L+ +KLRS + + I +G
Sbjct: 104 IYPFETASSPTGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148
+W++ F ++ I A + +R K+ S I+ Y R
Sbjct: 164 NTSAWHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRR 223
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 224 MLQGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283
Query: 209 ---GTDDLPPSGSPILTDDIEI 227
T LP S P+ D I
Sbjct: 284 LYESTKTLPTSDMPVYDPDTSI 305
>gi|315041995|ref|XP_003170374.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893]
gi|311345408|gb|EFR04611.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893]
Length = 407
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57
L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I
Sbjct: 49 LNNRSLISLSGVDSTGFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104
Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLS------ 103
S E +++E+D+ SL+ +KLRS + + V S
Sbjct: 105 YPFQTANSAAGEMEYLIEVDKETSGSLLKHFKRHKLRSKLKFRALDEGERSVWSLWDDGN 164
Query: 104 -WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINH 151
W++ F ++ I A + +R +K+ S I+ Y RI
Sbjct: 165 TWHENEAFKENNIIACPDGRAPGMGYRVIASGDKLPSRFIEAFPGDETSIQAYTLRRILQ 224
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--- 208
G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 225 GVGEGQAEMARESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYD 284
Query: 209 GTDDLPPSGSPILTDDIEI 227
T + P S +P+ D I
Sbjct: 285 STLEPPTSDTPVYNPDTNI 303
>gi|270006859|gb|EFA03307.1| hypothetical protein TcasGA2_TC013249 [Tribolium castaneum]
Length = 336
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 50/307 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISK-IEED 63
L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E +
Sbjct: 28 LNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSENN 87
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQ------- 106
T+++E D D L L Y++R + I + L+ NQ
Sbjct: 88 TYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPPL 147
Query: 107 EHTFSNSS----FIDERFS--------IADVLLHRTWGHNEKIA--SDIKTYHELRINHG 152
E F + D R + +DV + G N + S K Y LR + G
Sbjct: 148 ETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSLG 207
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + +
Sbjct: 208 VGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSKI 267
Query: 213 LPPSGSP---ILTDDIEIGTLGVVVGKKALAIARIDKV----DHAIKKGMALTVHGVRVK 265
P+ P I+ +++ +G L + G LA RI K + + G+A+T
Sbjct: 268 --PTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLGDGVAVT------- 318
Query: 266 ASFPHWY 272
S P W+
Sbjct: 319 -SRPSWW 324
>gi|103486912|ref|YP_616473.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis
alaskensis RB2256]
gi|98976989|gb|ABF53140.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis
alaskensis RB2256]
Length = 241
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISK 59
M+ L +++ I++ G+ FLQ ++T DV LP +A+LTPQGK L FLI
Sbjct: 1 MAITTLRDRALIRLSGEDVRGFLQGLVTNDVSGNLPVW----AALLTPQGKALFDFLIWG 56
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ D +++ +R + L +L Y+LR + I +P + + W E +D R
Sbjct: 57 -DGDDLLIDCERDAAEGLAKRLTLYRLRRAITIAREP--DLCVHWAPEGDLG---VVDPR 110
Query: 120 FSIADVLLHRTW---GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
L R W ++ A H L + G+ + ++ T + LN
Sbjct: 111 LPE----LGRRWLAPADGDEGADAAWRAHRLAL--GVTEGRSELGDGTTLWLECNAAELN 164
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
G+S KGCY+GQE +R+ R + +R +++
Sbjct: 165 GVSFAKGCYVGQENTARMNWRQKVNRRIVVL 195
>gi|302652124|ref|XP_003017922.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517]
gi|291181507|gb|EFE37277.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517]
Length = 409
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 43/262 (16%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFL 56
+L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVF 103
Query: 57 ISKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------IQPI--NG 99
I E E +++E+D+ + L+ +KLRS + + I +G
Sbjct: 104 IYPFETASSPAGEMEYLIELDKETSEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDG 163
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELR 148
+W++ F ++ I A + +R K+ S I+ Y R
Sbjct: 164 NTSAWHESEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDETSIEAYTLRR 223
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 224 MLRGVGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQ 283
Query: 209 ---GTDDLPPSGSPILTDDIEI 227
T LP S PI D I
Sbjct: 284 LYESTKTLPTSDMPIYDPDTSI 305
>gi|312380505|gb|EFR26480.1| hypothetical protein AND_07439 [Anopheles darlingi]
Length = 374
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 49/312 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE--- 62
LS+++ ++V G+ ++ FLQ ++T D+ + A + L G++ L+ + E
Sbjct: 59 LSDRALVRVHGEDSVSFLQGLMTNDMRHFEHSRAIYTMFLRVNGRVFCDALVYRHPEAKG 118
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERF 120
D F+LE DR L L Y+LR V + + +++ Q + + +DER
Sbjct: 119 NDDFLLECDRPAASRLEKHLKLYRLRKKVQVLLDETYHTWVAYRAQADPEAKALPVDERK 178
Query: 121 SIAD---------------VLLHRTWGHNEKIASDIKT----------YHELRINHGIVD 155
+ D VL+ EK+ ++T Y R G+ +
Sbjct: 179 AHTDPHLFKDPRLPRLGYRVLMGSNGDQTEKLDRLLETFPGEIATVPRYVPFRYTLGVGE 238
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ FP ++ D L+G+S KGCYIGQE+ +R H + RKR M + + LP
Sbjct: 239 GELNLPDGKAFPLESNCDWLHGVSFHKGCYIGQELTARTYHTGVTRKRLMPLQ-FEGLPL 297
Query: 216 SGSPI--LTDDIEIGTLGVVVGK-------KALAIARIDKVDHAIKKGMALTV------H 260
PI L + +G VGK + L + RI+KV + G LT+ H
Sbjct: 298 EDVPIDVLREADIKNQVGASVGKLRGYSAGQGLGLLRIEKV---LPAGGPLTLSVPGITH 354
Query: 261 GVRVKASFPHWY 272
+ P W+
Sbjct: 355 SIVCHTIRPFWW 366
>gi|308498249|ref|XP_003111311.1| hypothetical protein CRE_03852 [Caenorhabditis remanei]
gi|308240859|gb|EFO84811.1| hypothetical protein CRE_03852 [Caenorhabditis remanei]
Length = 280
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 29/281 (10%)
Query: 1 MSS---VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
MSS + L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+
Sbjct: 1 MSSQRLIKLPHRVLLKLHGADTNVFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLL 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ + LE + +D L+ +++ Y+LR V EI + V + +++ D
Sbjct: 61 WRRGTEDVFLECSKVNQDVLVKEIVKYRLRKRV--EISETSDQV--FFEQNPSDKHEHRD 116
Query: 118 ERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
RF+ R +G+ + +I+ + + Y LR + GI + + + + P A DLL
Sbjct: 117 PRFA---GFGARIFGNPPSSEISENREAYENLRRSTGIAEGADEL--ADLLPFQANGDLL 171
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
N +SL KGCYIGQE+ +R H +IR+R P G + G+ IL D + +G V
Sbjct: 172 NMVSLDKGCYIGQELTARTAHTGVIRRRILPFECEGQVKI---GADIL--DEKKNKVGKV 226
Query: 234 VGK---KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ + L I ++ K LT V + A P W
Sbjct: 227 ISSDTTRCLGILQLSSF-----KSSKLTADEVSLTAKQPEW 262
>gi|85084479|ref|XP_957315.1| hypothetical protein NCU06424 [Neurospora crassa OR74A]
gi|74628446|sp|Q7RYZ1|CAF17_NEUCR RecName: Full=Putative transferase caf-17, mitochondrial; Flags:
Precursor
gi|28918405|gb|EAA28079.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 439
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLI------ 57
L+++ I V G A FLQ +IT ++ P+ A G + LT QG+++ +I
Sbjct: 59 LTSRRLISVSGPDASKFLQGVITNNI-NAPHN-ANGFYTGFLTAQGRVVHDVIIYPDDLG 116
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ-EHTFSNSS 114
+ + +F++E+D + +L + YKLRS +++ L SWN + +
Sbjct: 117 PEPGKQSFLIEVDADEAATLHKHIKRYKLRSKFNLKLLDPEERALYHSWNDVDQAGPWTK 176
Query: 115 FIDERFSIAD---------------VLLHRTWGHNEKIASDI---KTYHELRINHGIVDP 156
IDE + + V++++T + D+ +YH R GI +
Sbjct: 177 LIDEVQNAGNARAVPDPRVPAFGSRVVVNQTSSSSPLTDGDLTPESSYHLRRFLLGIPEG 236
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214
++ + T P ++ MD++NGI KGCY+GQE+ R +HR ++RKR P I+ P
Sbjct: 237 QSEIISGTALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYYEGAAP 296
Query: 215 --PSGSP--------ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
P+ P +L ++E G ++ + A IDKVD + + G+
Sbjct: 297 EIPADGPGQLEALEKLLKPEVEQGVKAEMIPQG----ASIDKVDKKSRSAPGKWLRGI 350
>gi|325183767|emb|CCA18225.1| hypothetical protein TTHERM_00155360 [Albugo laibachii Nc14]
Length = 366
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 33/232 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S V LS++ ++V GK A FLQ I+T D+ L + + ++ LT +G+IL + ++
Sbjct: 14 SVVKLSSRKLVQVEGKDASRFLQGILTNDINKLKQRSSMYASFLTAKGRILGDCNVIRVN 73
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSN 112
E+TF ++ D S ++ L + YKLR V IE + +L+ Q+ +
Sbjct: 74 EETFWIDYDASSKEGLQNHWKRYKLRMKVSIEDRSDQFNILALLPALYRYPGLQKTSLDG 133
Query: 113 SSFIDERFSIADVLLHRTW---------------GHNEKI------ASDIKTYHELRINH 151
S I ++ A H + G++E I ++D + + RI
Sbjct: 134 ESAIFDKLETAYGSRHLIFTDPRSKMFGIRAVVEGNDESIVHDAFESADASIFDDRRIFL 193
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G + + + P +A +D L+G+S +KGCY+GQE+++R + ++RKR
Sbjct: 194 GAAEGSE---LHDLIPLEANLDALDGVSFSKGCYVGQELMARTHFKGLVRKR 242
>gi|289620040|emb|CBI53484.1| unnamed protein product [Sordaria macrospora]
Length = 446
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKIE-- 61
L+++ I V G A FLQ +IT ++ P+ A G + LT QG+++ +I E
Sbjct: 66 LTSRRLISVSGPDASKFLQGVITNNI-DAPHN-ANGFYTGFLTAQGRVVHDVIIYPDELG 123
Query: 62 ----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ-EHTFSNSS 114
+ +F++E+D ++ +L + YKLRS +++ L +WN + + S
Sbjct: 124 PEPGKRSFLIEVDANEAMTLHKHIKRYKLRSKFNLKLLDPEERALYHAWNDVDQSGPWSK 183
Query: 115 FIDE------RFSIAD---------VLLHRTWGHNEKIASDI---KTYHELRINHGIVDP 156
IDE ++ D V++++T + +D+ +YH R GI +
Sbjct: 184 LIDEIQKDGNPRTVPDPRVPAFGSRVIVNQTSSSSSLTDNDLTPESSYHLRRFLLGIPEG 243
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214
++ + + P ++ MD++NGI KGCY+GQE+ R +HR ++RKR P I+ P
Sbjct: 244 QSEIISGSALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYSEGAAP 303
Query: 215 --PSGSPILTDDIE-IGTLGVVVGKKALAI---ARIDKVDHAIKKGMALTVHGV 262
P+ P + +E + V G KA I A IDKVD + + G+
Sbjct: 304 EIPADGPGQLEALEKLLKPEVDEGVKAEMIPQGASIDKVDKKSRSAPGKWLRGI 357
>gi|218507752|ref|ZP_03505630.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli Brasil 5]
Length = 119
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTP GKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIASLAADEARPGALLTPHGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107
+ D +++E D +RD+L+ +L YKLR+ V + G+ + W ++
Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGINVCWGED 114
>gi|301619957|ref|XP_002939357.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 319
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 31/291 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---ILTPQGK----ILLYFLISKI 60
+ +++ G FLQ +IT DV ++A G+ +L QG+ ++LY L ++
Sbjct: 28 RRGLLQLRGPDPAMFLQGLITNDV----QRLAEGALYAHLLNVQGRSLFDVILYRLPTEH 83
Query: 61 EEDTFIL-EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFS----NS 113
E + IL E D + + L Y R VII P V V+S +Q+ S
Sbjct: 84 SETSAILLECDVAAVGPIQKHLSLYNFRRKVIICPCPELSVWAVISGSQKQDTQMPDLPS 143
Query: 114 SFI---DERFSIADVLLHRTWGHNEK---IASDIKTYHEL---RINHGIVDPNTDFLPST 164
S I D R L G N K ++ +Y+E R G+ + D P
Sbjct: 144 SVICAADPRVEAMGFRLVAQSGENPKKLLPETETGSYNEYTKHRYEQGVPEGVQDIPPGV 203
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--PSGSPILT 222
P ++ + +NGIS +KGCY+GQE+ +R H IIRKR + I + LP G+ ILT
Sbjct: 204 ALPLESNLVYMNGISFSKGCYLGQELTARTHHTGIIRKRLLPIRFSTPLPAEAEGADILT 263
Query: 223 DDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ G G LA+ R+ + + + + V VKAS P W+
Sbjct: 264 SAGKPAGKYRAGHGDIGLALLRMAHIGEELHIKPS-SGSSVSVKASIPEWW 313
>gi|189237667|ref|XP_001812410.1| PREDICTED: similar to GA20785-PA [Tribolium castaneum]
Length = 968
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 50/307 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISK-IEED 63
L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E +
Sbjct: 660 LNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSENN 719
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQ------- 106
T+++E D D L L Y++R + I + L+ NQ
Sbjct: 720 TYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPPL 779
Query: 107 EHTFSNSS----FIDERFS--------IADVLLHRTWGHNEKIA--SDIKTYHELRINHG 152
E F + D R + +DV + G N + S K Y LR + G
Sbjct: 780 ETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSLG 839
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + +
Sbjct: 840 VGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK- 898
Query: 213 LPPSGSP---ILTDDIEIGTLGVVVGKKALAIARIDKV----DHAIKKGMALTVHGVRVK 265
P+ P I+ +++ +G L + G LA RI K + + G+A+T
Sbjct: 899 -IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLGDGVAVT------- 950
Query: 266 ASFPHWY 272
S P W+
Sbjct: 951 -SRPSWW 956
>gi|116191917|ref|XP_001221771.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51]
gi|121786583|sp|Q2H6N9|CAF17_CHAGB RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|88181589|gb|EAQ89057.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51]
Length = 437
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------------SAILTPQGKILL 53
LS++ I V G A +LQ +ITA+ LT Y +A LT QG+IL
Sbjct: 69 LSSRKLISVSGPDAAKYLQGVITAN-LTPGYAGPNPTSEHLRSDAGFYAAFLTAQGRILH 127
Query: 54 YFLISKIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSW 104
I + DT +++E+D ++ D L + YKLR+ + + + V +W
Sbjct: 128 DVFIYRDVRDTTHPAGHSWLVEVDAAEADRLQKHIKRYKLRAKFDVRLLNEGEGRVWHAW 187
Query: 105 NQEH----TFSNSSFIDERFSIADVLLHRT--WGHNEKIASDI-----------KTYHEL 147
+ + T + SF +I HR GH S Y
Sbjct: 188 DDANPSSLTTTQPSFPSSSPTIITTPDHRAPNLGHRLLTFSTPTPSLPLPTLPETAYRLR 247
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R HGI + + L +T PH++ +D + KGCY+GQE+ R +HR ++RKR
Sbjct: 248 RYRHGIAEGQAELLYNTALPHESNLDATGAVDFRKGCYVGQELTIRTEHRGVVRKR 303
>gi|94496221|ref|ZP_01302799.1| aminomethyl transferase [Sphingomonas sp. SKA58]
gi|94424400|gb|EAT09423.1| aminomethyl transferase [Sphingomonas sp. SKA58]
Length = 273
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DVLTL R + +LTPQGK L ++ +
Sbjct: 25 MTGTTLTDRALLRISGEEARAFLQGLLTRDVLTLQPGHPRWTGLLTPQGKALFDVILWED 84
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSF 115
D I + + S+ D L +L Y+LR V I + + + W +Q H +
Sbjct: 85 GGDVLI-DCEASQADMLAKRLTLYRLRRKVTIARE--EALAVHWSPDAADQPHDPRLPAL 141
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ AD +T G + A+ + R++ G+ + + + + L
Sbjct: 142 GHRWLASAD---DQT-GEGDAAAA----FRTHRLSLGVFEGVEELGQDQVLWLETNAQEL 193
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ KGCY+GQE +R+ +RN + +R
Sbjct: 194 GGVDYDKGCYVGQENTARMHYRNKVSRR 221
>gi|332374088|gb|AEE62185.1| unknown [Dendroctonus ponderosae]
Length = 343
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIE-E 62
+L +S ++V G A FLQ +IT D+ L ++ A+ L +G+IL LI K E +
Sbjct: 27 HLKERSLVQVKGPDASNFLQGLITNDINHLSDRVGSMFAMFLNIRGRILFDTLIYKTEVK 86
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPING------------VVLSW 104
D + +E DR +L L YK++ V I E+ + V+
Sbjct: 87 DEYWVECDRIASTTLQKHLKMYKVKRQVDITGLDDYEVHVLYSSKFLDTSVTDFKSVIEN 146
Query: 105 NQEHTFSNSS-----------FIDER-----FSIADVLLHRTWGHNEKIASD-IKTYHEL 147
+ F SS F D R F I + N + D +Y +L
Sbjct: 147 AGKSDFPESSAGFRSFNSLLIFKDPRVPHMGFRILSKRIDVQSVLNSLVECDDSNSYRKL 206
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM 205
+ + GI + D L + FP + D L+G+S KGCYIGQE+ +R H +IRKR P+
Sbjct: 207 KFSLGIGEGIEDLLSGSSFPLECNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPL 266
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ P G+ I+ + +G L + G LA+ R V A++ G ++TV
Sbjct: 267 HFSKVPTALPEGN-IVINKSNLGKLRGIEGNVGLALLR---VAEALELG-SITVGNGEAS 321
Query: 266 ASFPHWY 272
P W+
Sbjct: 322 IVKPFWW 328
>gi|316967725|gb|EFV52115.1| aminomethyl transferase family protein [Trichinella spiralis]
Length = 488
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64
L+N+ +KV G + LQ +++ DVL L + S +L QG+I+ L+ + E+ +
Sbjct: 33 LNNRKILKVTGPDRMALLQLVLSNDVLLLHEHRSLYSLMLNKQGRIMYDVLLFEDEDGKS 92
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSI 122
++E D +I +L Y++R V + V + + NQ H S + + I
Sbjct: 93 TLVECDADVHADVIAFILKYRMRKTVDVVADNSRSVYVYYLPNQAHIREPSIRLPDGTLI 152
Query: 123 A-----DVLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
A + L R + I++ +K Y + R + + + + DF+P T FPH+
Sbjct: 153 AKDPRSEYLGFRIITESSLISTISAGCVTLKEYIDYRYSLALGEGSKDFIPGTCFPHETN 212
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G++ +KGCYIGQE+ +RI++ ++RKR M
Sbjct: 213 ARQFKGMNFSKGCYIGQELTARIEYTGVVRKRFM 246
>gi|328785953|ref|XP_001120590.2| PREDICTED: putative transferase C1orf69, mitochondrial-like [Apis
mellifera]
Length = 371
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 58/318 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIEEDT 64
L N+S ++V G + FLQ +IT D+ A A+ L +G+++ +I + +ED
Sbjct: 46 LKNKSLLRVRGNEVLIFLQGLITNDMKHFEEGAANLYALFLNTKGRVMYDVIIYRSQEDN 105
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQE-- 107
+ +E D +SL L Y++R + I+ IQ +N ++ Q+
Sbjct: 106 VYYIECDSQAAESLQKHLKMYRVRRKIDIDYLEDSVNVWAFFDPIQHMNNKHINNRQKLE 165
Query: 108 ------HTFSNSS---------FIDERFS--------IADVLLHRTWGHNEKIASDIK-- 142
T +N + D R S +++ H+ H A D
Sbjct: 166 GLIFPCGTLNNKVSKIVDNIMIYEDPRLSDLGIRILAASEIERHKIIKHLNSNALDSANH 225
Query: 143 -TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H ++R
Sbjct: 226 LSYKAFRYKLGVPEGIEDLPPGKPLPLEVNCDYLHGVSFHKGCYIGQELTARTYHTGVVR 285
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-------KALAIARIDKVDHAIKKG 254
KR M + +++P D+ I G VVGK L + RI+ +A
Sbjct: 286 KRLMPLL-FNEVP--NKSFSYDEKIINETGNVVGKFRGIENQYGLGLMRINDSLNA---- 338
Query: 255 MALTVHGVRVKASFPHWY 272
+LT+ +++K S P W+
Sbjct: 339 QSLTISNIKLKVSKPIWW 356
>gi|313236585|emb|CBY19877.1| unnamed protein product [Oikopleura dioica]
Length = 308
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 30/260 (11%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+S I + G+ A LQ +IT D+ L + + S L +G++ ++ + ED ++E
Sbjct: 26 RSLISIRGEDAKALLQGVITNDISNLQHVGSMYSMFLNAKGRVYFDAILYHLNEDEILIE 85
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------QEHTFSNSSFIDERFS 121
D+ L L YK+R V I IN V W+ + +FID R
Sbjct: 86 GDKILSAKLKKHLSMYKIRRKV--NIHAINESV--WHVVPGDDILDLGTLGDTFIDPRL- 140
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ + R + ++ YH R GI + + + FP + DL++G+S
Sbjct: 141 --EKMGARVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGVSFH 198
Query: 182 KGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP-----SGSPILTDDIEIGTLGVVV 234
KGCY+GQE+ +R H + RKR P+ ++ +D+ S I+T D E
Sbjct: 199 KGCYLGQELTARTFHTGVTRKRIVPLKLSPGNDVSDIKAKRSAGKIITVDSE-------- 250
Query: 235 GKKALAIARIDKVDHAIKKG 254
LA+ R D D +K G
Sbjct: 251 -GNGLAMFRTDNFDKTVKVG 269
>gi|317150522|ref|XP_001824084.2| transferase caf17 [Aspergillus oryzae RIB40]
Length = 448
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55
L+N+ I + G + FLQ +IT ++L + +A L QG++L LY
Sbjct: 49 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 108
Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109
L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 109 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 168
Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143
+++ E S IA + R G +I A D++T
Sbjct: 169 PRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAGSEV 228
Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H +
Sbjct: 229 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 288
Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227
+RKR + + TG D L +G+P+ E+
Sbjct: 289 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 320
>gi|121799784|sp|Q2U664|CAF17_ASPOR RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|83772823|dbj|BAE62951.1| unnamed protein product [Aspergillus oryzae]
Length = 447
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55
L+N+ I + G + FLQ +IT ++L + +A L QG++L LY
Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 107
Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109
L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 108 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 167
Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143
+++ E S IA + R G +I A D++T
Sbjct: 168 PRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAGSEV 227
Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H +
Sbjct: 228 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 287
Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227
+RKR + + TG D L +G+P+ E+
Sbjct: 288 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 319
>gi|259416996|ref|ZP_05740916.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B]
gi|259348435|gb|EEW60212.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B]
Length = 248
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 14/253 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ ++ G FLQ ++T D+ L + +AILTPQGK L F ++ E +
Sbjct: 1 MADRRIFRLHGPDTHSFLQGLVTNDINRLEDGLVY-TAILTPQGKYLADFFLAP-EGEAV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ D L+ +L YKLR+NV I+ + V E + D R +
Sbjct: 59 LLDVADDLADDLLKRLKMYKLRANVTIDETDLK--VRRGTGEA--PAGALTDPRHT---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G + D + +R+ H I + + P + + + + LNG+ KGCY
Sbjct: 112 LGWRFYG--DVAGEDGSDWDAIRVAHVIPETGIELTPDS-YILEVGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + D P G+ I +G + G KA+A R D
Sbjct: 169 VGQEVTARMKHKTELRK-GLTQVEIDGAVPVGAQITAAGKPVGQVLTQSGGKAIAYLRFD 227
Query: 246 KVDHAIK-KGMAL 257
+ A++ +G AL
Sbjct: 228 RAKGALEAEGTAL 240
>gi|46205197|ref|ZP_00209741.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 115
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
D F LE + L+ +L Y+LR+ V + P GV +W+ T + ++ +
Sbjct: 60 AGDGFRLETAAERVADLVKRLGLYRLRAKVSLAADPTLGVAAAWDGAETAAETARV 115
>gi|238499867|ref|XP_002381168.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357]
gi|220692921|gb|EED49267.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357]
Length = 448
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL------TLPYKIARGSAILTPQGKIL----LYF 55
L+N+ I + G + FLQ +IT ++L + +A L QG++L LY
Sbjct: 49 LTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAFLYP 108
Query: 56 L----ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109
L ++ +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 109 LPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKDHEQ 168
Query: 110 FSNSSFIDERFS---------IADVLLHRTWGHNEKI----ASDIKT------------- 143
+++ E S IA + R G ++ A D++T
Sbjct: 169 PRWAAYNLESSSSSPFSPSSSIAGCIDTRAPGFGSRLITPGAEDLRTHVPDETQIAGSEV 228
Query: 144 ----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H +
Sbjct: 229 SLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHHTGV 288
Query: 200 IRKRPM---IITGTDD-LPPSGSPILTDDIEI 227
+RKR + + TG D L +G+P+ E+
Sbjct: 289 VRKRILPVQLYTGDQDALESAGAPVYDPTAEL 320
>gi|320461691|ref|NP_001070103.2| putative transferase C1orf69 homolog, mitochondrial [Danio rerio]
gi|263405678|sp|B8JMH0|CAF17_DANRE RecName: Full=Putative transferase CAF17 homolog, mitochondrial;
AltName: Full=Iron-sulfur cluster assembly factor
homolog; Flags: Precursor
gi|220673097|emb|CAX13033.1| novel protein (zgc:153540) [Danio rerio]
Length = 354
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 35/302 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGK----ILLYF 55
S L +++ + V G+ FLQ IIT D+ L A + +L QG+ I+LY
Sbjct: 50 SCYRLPHRTVLNVSGQDTSSFLQGIITNDMNLLGEDSLNAMYAHVLNVQGRTLYDIILYS 109
Query: 56 LISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEH---- 108
L + + +LE D + +DS++ L YK+R V + + P + +L ++E
Sbjct: 110 LKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSLSLWALLPHSKEAVLGR 169
Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDP 156
T ++ + E+ +++ R + DI + YH R G+ +
Sbjct: 170 PDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGNTEEYHRHRYEIGLPEG 229
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP 214
D P P +A + + GIS +KGCYIGQE+ +R H +IRKR P+ ++ +
Sbjct: 230 VGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKRLMPVSLSAPAEKL 289
Query: 215 PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPH 270
GS + T+ + G V K L++ R+ HA K+ + L G V V AS P
Sbjct: 290 NQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQLKSSGDETVTVLASVPD 345
Query: 271 WY 272
W+
Sbjct: 346 WW 347
>gi|326921387|ref|XP_003206941.1| PREDICTED: putative transferase C1orf69, mitochondrial-like
[Meleagris gallopavo]
Length = 248
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----VLSWNQEHTFSNS-SF 115
EE +LE D S D++ L YK+R V I P + V+ Q S S +
Sbjct: 10 EEPHILLECDSSVLDAVQKHLKLYKIRRKV--SISPCLDLSLWAVIPGEQAGDISGSLAQ 67
Query: 116 IDERFSI------ADVLLHR---TWGHN--EKIAS----DIKTYHELRINHGIVDPNTDF 160
ER + A+V+ R G N E I +I+ YH R GI + D
Sbjct: 68 YAERALVLTPDPRAEVMGWRLIVKAGANLPEVIPGSRIENIQDYHRHRYKQGIPEGVKDL 127
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PS 216
P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P
Sbjct: 128 PPGVPLPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPE 187
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK--ASFPHWY 272
G+ ILT+ + G L IA + + I + + L V G +VK AS P W+
Sbjct: 188 GAEILTETGKAAG-KFRAGGDELGIALLRLAN--INEPLCLNVAGNKVKLTASIPEWW 242
>gi|326483599|gb|EGE07609.1| hypothetical protein TEQG_06523 [Trichophyton equinum CBS 127.97]
Length = 395
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 33/249 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILLYFLI 57
L+N+S I + G + FLQ +IT ++ +T P+ +A L QG+IL I
Sbjct: 49 LNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFY----AAFLNSQGRILNDVFI 104
Query: 58 SKIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------QPINGVV 101
E E +++E+D+ + L+ +KLRS + +G
Sbjct: 105 YPFETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNT 164
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
W++ F S+ I S A + +R K S Y R+ G+ + +
Sbjct: 165 SDWHENDVFKESNAIICPDSRAPGMGYRKPFLAMKPRSRPIRY--ARMLQGVGEGQIEMP 222
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGS- 218
+ P D+ +D++NGI KGCY+GQE+ R HR ++RKR P+ + + PP+
Sbjct: 223 RESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYESTQAPPTSDI 282
Query: 219 PILTDDIEI 227
P+ D I
Sbjct: 283 PVYDPDTSI 291
>gi|322826129|gb|EFZ30885.1| hypothetical protein TCSYLVIO_2815 [Trypanosoma cruzi]
Length = 317
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 32/300 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIEE 62
LS++S I+V G +A FLQ + T D+ L + L G+++ + S++
Sbjct: 7 LSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVHG 66
Query: 63 -DTFIL-EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTF 110
D IL ++ R D+L D LL ++R + I+ VV++ + +E T
Sbjct: 67 GDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVATSSYGNGGIYEEEEKTP 126
Query: 111 SNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
SS F+D R LH++ + + Y GI + F P+
Sbjct: 127 PPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPDVFKPA 186
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--------TGTDDLP- 214
FP + D L G+S KGCY+GQE+ R + RKR + + TG +
Sbjct: 187 RSFPFECNTDFLRGVSFQKGCYLGQELTHRTHVMLVTRKRTVPLRFPSFQEETGGERRSV 246
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWYK 273
G +L D ++G L V G L + R+ VD A + L + V V + P W++
Sbjct: 247 EKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIPGWWE 306
>gi|302694057|ref|XP_003036707.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8]
gi|300110404|gb|EFJ01805.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8]
Length = 391
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
++N++ + V G A+ FL ++ ++V P+K +A L PQG++L + + T
Sbjct: 19 VANRALLAVTGSQAVEFLNGLVASEVHA-PHKPFY-TAFLHPQGRVLHDAFVYTTTDPTS 76
Query: 65 ----FILEIDRSKRD---SLIDKLLFYKLRSNVII-------EIQPINGVVLS---WNQE 107
+++E D + +L D L Y LRS V + ++ G + W+ E
Sbjct: 77 GAKGYVIEYDTRPGELSTALPDLLKRYILRSKVKLRDVTNEYDVWQAWGSPQAERFWDHE 136
Query: 108 H--TFSNSSFIDERFSIADVLLHRTW--------------------GHNEKIASD----- 140
F+ S ++ + + + TW G + ASD
Sbjct: 137 RRWAFAKSGAVEPAWDVLNAWPWGTWDLALHDRRAPGMGTRMLVRKGDKPEAASDHDIAS 196
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
Y RI HG+ + D P+ FP ++ +D++ G++ KGCY+GQE+ R H ++
Sbjct: 197 TDAYKLHRILHGVPEGTADIPPTQAFPMESNLDIMGGLNFRKGCYVGQELTVRTYHTGVV 256
Query: 201 RKR 203
RKR
Sbjct: 257 RKR 259
>gi|295670505|ref|XP_002795800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226284885|gb|EEH40451.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 1460
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60
L +++ I V G+ + FLQ +IT ++LT +P K +A L G++L I +
Sbjct: 1037 LPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIP-KTGFYAAFLNAPGRVLNDVFIYPV 1095
Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQ--- 106
+ +++E+D+++ +L+ L +KLRS + + + WN+
Sbjct: 1096 PPNDSFNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDA 1155
Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146
E+ F + F+ D R G EK+ + D TY+
Sbjct: 1156 DLLTEYDFELENGKSPPFTCTDT---RAPGFGFRLLAPEKVVNEQPIMPGERVDFATYNL 1212
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--- 203
RI HGI + + + + P + MD++ I KGCY+GQE+ R HR ++RKR
Sbjct: 1213 RRILHGIPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILP 1272
Query: 204 --------PMIITGTDD--------LPPSGSPILT----DDIEIGTLGVVVGKKALAIAR 243
PM T T D LPP+G+ I G VG LA+ R
Sbjct: 1273 VRFYDINEPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCR 1332
Query: 244 ID 245
++
Sbjct: 1333 LE 1334
>gi|330925183|ref|XP_003300945.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1]
gi|311324671|gb|EFQ90954.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1]
Length = 428
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 41/276 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV---LTLPYKIARGSAILTPQGKILLYF----- 55
+L ++ I + G A FLQ +IT +V P+ SA L QG++L
Sbjct: 96 AHLPHRRLISLSGPDAAKFLQGLITNNVDPNRPKPFY----SAFLNAQGRVLWDVFVWVW 151
Query: 56 --LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
L+++ ++ T +E+D + + L L +KLRS V IE + V + W + +++
Sbjct: 152 PELLAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISEDEVCV-WAAWGSAADA 210
Query: 114 SFIDERFSIADVLLHRTWGHNEKIA-SDIKT------------YHELRINHGIVDPNTDF 160
+D ++ D+ R + +A +D+KT Y R +GI + +
Sbjct: 211 P-VDANDAMVDMRDPRAPNFHRYLAYADVKTLVPGTEPLGVTEYQVERYRYGIAEGPDEI 269
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
P + +DL +GI KGCY+GQE+ R +H ++RKR + IT L P P+
Sbjct: 270 PRENALPMEYNIDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITL--QLHPLAEPV 327
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
T +E G+ I ID +K+G A
Sbjct: 328 ETIRVEPGS----------EIKTIDDTHIGLKRGRA 353
>gi|53130544|emb|CAG31601.1| hypothetical protein RCJMB04_8k1 [Gallus gallus]
Length = 165
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+++ YH R GI + D P P ++ + +NG+S TKGCYIGQE+ +R H
Sbjct: 23 ENVQDYHRHRYKQGIPEGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMG 82
Query: 199 IIRKRPMIITGTDDLP----PSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253
+IRKR + + + LP P G+ ILT+ + G + +A+ R+ V+
Sbjct: 83 VIRKRLVPVQFSVPLPQESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEP--- 139
Query: 254 GMALTVHGVRVK--ASFPHWY 272
+ L V G +VK AS P W+
Sbjct: 140 -LCLNVAGDKVKLTASIPEWW 159
>gi|328876509|gb|EGG24872.1| putative mitochondrial transferase [Dictyostelium fasciculatum]
Length = 398
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 51/260 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59
V L N++ ++V GK ++ FLQ + T ++ L ++I L G++L ++S
Sbjct: 14 VPLKNRTLVRVSGKDSVKFLQGLTTNNLTRLSDNQNTHASIYTGFLASTGRLLFDAIVSL 73
Query: 60 IEED----------------------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI 97
++ ++I+++D + D + + L FYK+R V IE
Sbjct: 74 EKQSTTTTSTASTTAATASDSNSATHSYIVDVDSAVADKVFEHLKFYKMRDKVTIEDATQ 133
Query: 98 NGVVLSW--NQEHTFSNSSFID----ERFSIADVLLHRTWG-----HNEKIA-------- 138
+ V+S T N + E+ S+ H G N K +
Sbjct: 134 HYSVMSVLDKTYKTIRNDKLFEHLEEEQCSVMMDPRHDNMGIRILVPNSKTSIAKKDLFS 193
Query: 139 ----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
D + YH R+ +GI + D+ +T+ P + DLLNG+ KGCY+GQE+ SR
Sbjct: 194 TYSEEDEELYHLYRLQNGIPEGLKDYNYNTVIPLEYNFDLLNGVDFHKGCYLGQELTSRT 253
Query: 195 QHRNIIRKR--PMIITGTDD 212
+ +IRKR P+ + D+
Sbjct: 254 HYTGLIRKRIFPVTMKAKDE 273
>gi|325091183|gb|EGC44493.1| aminomethyltransferase [Ajellomyces capsulatus H88]
Length = 412
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 46/264 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60
L ++ I V GK + FLQ ++T ++LT +P K +A L G++L I +
Sbjct: 47 LPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVP-KSGFYAAFLNAPGRVLHDVFIYPV 105
Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109
+ +++E+D+++ +L+ + +KLRS + + + WN+E
Sbjct: 106 PPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEEDA 165
Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146
F + F+ D R G EK+ + D TY+
Sbjct: 166 GQLTECDFQLDNGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNL 222
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204
RI HG+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR P
Sbjct: 223 RRILHGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILP 282
Query: 205 MIITGTDD-LPPSGSPILTDDIEI 227
+ + D+ +P + +P + + ++
Sbjct: 283 VQLYDIDETMPKTETPYYSSESKL 306
>gi|312216597|emb|CBX96547.1| hypothetical protein [Leptosphaeria maculans]
Length = 401
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV---LTLPYKIARGSAILTPQGKILLYF---- 55
S L+++S I + G A FLQ +IT +V P+ +A L +G++L
Sbjct: 78 SAPLAHRSLISLSGPDAAKFLQGLITNNVDASRQAPFY----AAFLDARGRVLWDVFIWV 133
Query: 56 ---LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
L+++ +E+D+++ +L L +KLRS V IE G+ +W
Sbjct: 134 WPELVAEKGHWACYIEVDQTEAGALKKHLKRHKLRSKVTIEDAESVGIWAAWGDA----- 188
Query: 113 SSFIDERFSIADVLLHRTWG-HNEKIASD------------IKTYHELRINHGIVDPNTD 159
+ + + +++D+ R G H +A D + YH R G+ + +
Sbjct: 189 PAQVPKENAVSDLQDPRAPGLHRYLVAHDRTSLADRSEVLDVSEYHLQRYLLGVPEGPVE 248
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT----GTDDLPP 215
+ P + +DL +GI KGCY+GQE+ R +H ++RKR + I G PP
Sbjct: 249 IPRESALPMECNIDLSSGIDFKKGCYVGQELTIRTKHTGVVRKRMLPIQLEHPGASVSPP 308
Query: 216 -SGSPI--LTDDIEI------GTLGVVVGKKALAIARID 245
SG+ I L DD G VG+ LA+ R++
Sbjct: 309 VSGTDIKQLDDDGRTKRGRAAGKFIAGVGQVGLALCRLE 347
>gi|225684495|gb|EEH22779.1| glycine cleavage T-protein [Paracoccidioides brasiliensis Pb03]
Length = 438
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60
L +++ I V G+ + FLQ +IT ++LT +P K +A L G++L I +
Sbjct: 50 LPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIP-KTGFYAAFLNAPGRVLNDVFIYPV 108
Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109
+ +++E+D+++ +L+ L +KLRS + + + WN+E
Sbjct: 109 PPNDSYNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDA 168
Query: 110 FSNSSFIDE-------RFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146
+ + E F+ D R G EK+ + D TY+
Sbjct: 169 DLLTEYDIELENGKSPPFTCTDT---RAPGFGFRLLAPEKVVNEQPIMPGERVDFATYNL 225
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--- 203
RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR ++RKR
Sbjct: 226 RRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILP 285
Query: 204 --------PMIITGTDD--------LPPSGSPILT----DDIEIGTLGVVVGKKALAIAR 243
PM T T D LPP+G+ I G VG LA+ R
Sbjct: 286 VRFYDINDPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCR 345
Query: 244 ID 245
++
Sbjct: 346 LE 347
>gi|242777590|ref|XP_002479065.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722684|gb|EED22102.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC
10500]
Length = 446
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 53/260 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT------LPYKIARGSAILTPQGKILLYFLISK 59
L+N++ I + G + FLQ +IT ++L P + SA L QG++L I
Sbjct: 40 LTNRALIAITGVDSTSFLQGMITQNMLMGKEPVRAPRRTGSYSAFLNSQGRVLHDVFIYP 99
Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
I +E +++E+D+++ +L+ L +KLR+ + + + +WN
Sbjct: 100 ITKGNLGHSNESPDEAAWLIEVDKAEVSNLMKHLKKHKLRAKLTLRALEDGEQSIWAAWN 159
Query: 106 QEHTFSN----------SSFIDERFSIADVLLHRTWGHNEK------------------- 136
E T S + + + + R G +
Sbjct: 160 NESTEPRWAAYNLESDFPSQLADNSPVVGCIDTRAPGFGTRYITPGPDDLQIHLPAETKL 219
Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ D++TY R +G+ + + + + P + MD+ GI KGCY+GQE+ R
Sbjct: 220 QGLQVDLETYKLRRYLYGVAEGQGEIIRESSLPMECNMDVARGIDFRKGCYVGQELTIRT 279
Query: 195 QHRNIIRKR--PMIITGTDD 212
H ++RKR P+ + G D+
Sbjct: 280 HHTGVVRKRILPVQLYGVDE 299
>gi|83594272|ref|YP_428024.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodospirillum rubrum ATCC 11170]
gi|83577186|gb|ABC23737.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodospirillum rubrum ATCC 11170]
Length = 312
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64
++ + + G + FLQ +++ DV + A +A LTPQGK L F + + E
Sbjct: 19 DRGVLGLSGADRVSFLQGLVSNDVTRAGPEQALWAAFLTPQGKYLHDFFVVSVGEGESAR 78
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS----------- 111
+L + ++ + L +L Y+LRS V +++ V+ N +
Sbjct: 79 LLLVGEAARLEDLRARLSRYRLRSKVTLDLAGGWTVAVIPGRNAAASLGLPDRPGAMRAL 138
Query: 112 ---NSSFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
+F+D R S A V LL + + R+ G+ + + D P
Sbjct: 139 DGGGLAFVDPRLSAAGVHLLLPEAAAKPPLPLGEESLWQAHRLALGLPEGSDDLEPEKAL 198
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDD 224
+ + L G+ KGCY+GQE+ +R ++R +++KR P+ I G LP GS + T +
Sbjct: 199 LLENGFEELGGVDFKKGCYMGQELTARTKYRGLVKKRLIPVAIDGP--LPAPGSALRTGE 256
>gi|222634911|gb|EEE65043.1| hypothetical protein OsJ_20031 [Oryza sativa Japonica Group]
Length = 596
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 47/240 (19%)
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSFIDERF 120
+ ++D ++ D L+ Y+LRS V EI ++ L W N EHT S+ E
Sbjct: 356 LADVDAAEVDELLACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHT-GPSTQEPEAQ 412
Query: 121 SIADVLLHRTWGHN-----EKIA----------SDIKTYHELRINHGIVDPNTDFLPSTI 165
SI WG E A +D + Y RI +G+ + +T+
Sbjct: 413 SIG-------WGQGVDHAAESAAQAPLVESDKEADERHYLLWRIENGVAEGSTEIPKGEA 465
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--------LPPSG 217
P + LN IS KGCYIGQE+++R HR +IRKR M + D+ + P G
Sbjct: 466 IPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQAVAP-G 524
Query: 218 SPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272
S ++ + +IGT+ +G + + + R+++ A+K+ +L + VRVKA P W+
Sbjct: 525 SEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRDVRVKAIKPDWW 581
>gi|89071053|ref|ZP_01158264.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
gi|89043384|gb|EAR49603.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
Length = 243
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK-ILLYFLISKIEEDT 64
+S+++ ++ G + FL ++T +V P R +A+LTPQGK I +FL++ E +
Sbjct: 1 MSDRTIFELTGSDRVKFLDNLVTNNV-PAPGDGLRYAALLTPQGKYIADFFLLA--EPER 57
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+++ +L +L Y+LR++V + EI + +F D R
Sbjct: 58 LLIDAPAVVAPALAQRLSMYRLRADVALAEID-----LAVRRGTGPAPEGAFADPRHP-- 110
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
L R +G D + LR+ H + + + L + + + LNG+ KG
Sbjct: 111 -ALGWRLYGTG--AGDDGTDFDALRVEHVVPEAGRE-LDGDSYVLEMGFERLNGVDFRKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
CY+GQEV +R++H+ +RK + P G+ I++D G L V + LA R
Sbjct: 167 CYVGQEVTARMKHKTDLRKGLARVRLEGAAEP-GTEIVSDGRSAGILHTVCASRGLAYVR 225
Query: 244 IDKVDHAIKKGMA 256
D+ + G A
Sbjct: 226 YDRATGRMTAGDA 238
>gi|47220333|emb|CAF98432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 36/303 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISK 59
+ +L +++ +++ G FLQ +IT DV L P K A + +L QG+ L ++ +
Sbjct: 20 ACYHLPHRTVVRLQGPDTGLFLQGLITNDVGLLEEPGKGAMYAHMLNVQGRTLFDIMLYR 79
Query: 60 IEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
++E +E D + +L+ YKLR + I P V ++ ++
Sbjct: 80 LKESDAGLGVFVECDSTVEAALLRHFKMYKLRKKLHINPCPELSVWAVLPKQRPTEQAAS 139
Query: 116 IDERFSIADVLLHRTWGHNEKIA--------------------SDIKTYHELRINHGIVD 155
E S L+ T ++ D + YH R G+ +
Sbjct: 140 KPELSSPDKGLVLVTDPRTAEMGWRLVLDNQVDPLDIITSCHKGDTEEYHRHRYAIGLPE 199
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG-TDD 212
D P P ++ + + GIS +KGCYIGQE+ +R H ++RKR P+ ++ D
Sbjct: 200 GVKDLPPGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKRLMPVCLSAPVQD 259
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI---KKGMALTVHGVRVKASFP 269
L + G VGK L++ R + K A+ V V+AS P
Sbjct: 260 LEEGAALQTQSGKPAGKHRAGVGKLGLSLVRTANAKEVLTLKSKNDAV----VTVQASVP 315
Query: 270 HWY 272
W+
Sbjct: 316 DWW 318
>gi|258567086|ref|XP_002584287.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905733|gb|EEP80134.1| predicted protein [Uncinocarpus reesii 1704]
Length = 348
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 36/240 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISK 59
V L+N++ I + G + FLQ +I+ +V+T + + + L QG++L I
Sbjct: 57 VRLTNRALISLTGVDSTAFLQGLISQNVVTPKNRASPTTPFYAGFLNAQGRLLHDTFIYP 116
Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
E +++E+D+++ +L+ +KLRS + + + + W+
Sbjct: 117 TFAPEGSNGADTGSELGYLVELDKAQVSNLMKHFKKHKLRSKLKLRALEEGEKDIWAVWD 176
Query: 106 QEHTFSNSSFIDERFSIADVLLHRT--WGHN---------------EKIASDIKTYHELR 148
+ D + + +R +GH + + TYH R
Sbjct: 177 NTGNWEAKDSGDVLREVLTCVDNRVPDFGHRLLLDEGSLQSSLELFPGQEASLSTYHLRR 236
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-PMII 207
I HG+ + + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+II
Sbjct: 237 ILHGVPEGQDELVRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRYPIII 296
>gi|121713844|ref|XP_001274533.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1]
gi|158512623|sp|A1CBI9|CAF17_ASPCL RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|119402686|gb|EAW13107.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1]
Length = 450
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 52/274 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARG----SAILTPQGKILLYFLI-- 57
L+N+ I + G + FLQ +IT ++L P + R +A L QG++L I
Sbjct: 48 LTNRGLISITGIDSTTFLQGLITQNMLVANDPNRAIRRTGTYAAFLNSQGRVLNDAFIYP 107
Query: 58 --------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108
+ E+ +++E+D+ + SL+ L +KLRS + + ++ V S ++H
Sbjct: 108 MPRVDGGAAAPEDPAWLVEVDKCEVSSLMKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167
Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139
T + + IA + R G +I +
Sbjct: 168 TEPRWAAYNLESESSSQFSPSSPIAGCVDTRAPGFGSRIVTPGGEDLRMHFPDEAQVAGG 227
Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
D+ Y R+ HGI + ++ + + P + MD+ G+ KGCY+GQE+ R H
Sbjct: 228 EVDLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMARGVDFRKGCYVGQELTIRTHHT 287
Query: 198 NIIRKR--PM-IITGTDD-LPPSGSPILTDDIEI 227
++RKR P+ + TG D +P G P +E+
Sbjct: 288 GVVRKRIVPVQLYTGAQDTVPVDGLPAYDSSVEV 321
>gi|71649960|ref|XP_813688.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878596|gb|EAN91837.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 319
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIE- 61
LS++S I+V G +A FLQ + T D+ L + L G+++ + S+++
Sbjct: 7 LSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVDG 66
Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113
E ++++ R D+L D LL ++R + IE VV++ + ++ N
Sbjct: 67 GEVCILVDVHRDVVDTLHDHLLDMRMRRRLQIENAGKEFVVVAGS---SYGNGGIYEEEE 123
Query: 114 ------------SFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNT 158
+F+D R L ++ + + Y GI +
Sbjct: 124 EEKTPPLSSECETFMDPRSFAFPAPLQKSIFPLSKAPSVTDPVARYETFLYTAGIGEGPD 183
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------G 209
F P+ FP + D L G+S KGCY+GQE+ R + RKR + + G
Sbjct: 184 VFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGG 243
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASF 268
G +L D+ ++G L V G L + R+ VD A + L + V V +
Sbjct: 244 GRRSVEKGEALLIDERKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITI 303
Query: 269 PHWYK 273
P W++
Sbjct: 304 PGWWE 308
>gi|260428381|ref|ZP_05782360.1| glycine cleavage T protein [Citreicella sp. SE45]
gi|260422873|gb|EEX16124.1| glycine cleavage T protein [Citreicella sp. SE45]
Length = 244
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 14/250 (5%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ ++V G FLQ ++T DV L + +A+LTPQGK F + ED ++
Sbjct: 4 TRKVLRVSGPETEHFLQGLVTNDVALLKDGLVY-AALLTPQGKYRADFFLVPDGED-ILV 61
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
++ + L L YKLR+ V I I V + + D R
Sbjct: 62 DVAEGLYEGLAKALTMYKLRAKVTISETDI-AVARGPGPAPEGAYADPRDPRMG------ 114
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
W + + + LR+ + + + P T F +A + L+G+ KGCY+G
Sbjct: 115 ---WRAYDGRPDESADWDALRVAACVPESGIELTPDT-FILEAGFERLHGVDFRKGCYVG 170
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
QEV +R++H+ +RK ++ + P GS I + G L + +A R D+
Sbjct: 171 QEVTARMKHKVELRKG-LVTVEVNGAAPVGSEITAGEKAAGVLYTQAEGRGIAHLRFDRA 229
Query: 248 DHAIKKGMAL 257
+ G A+
Sbjct: 230 GDEMTAGDAV 239
>gi|148259282|ref|YP_001233409.1| glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum
JF-5]
gi|326402437|ref|YP_004282518.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301]
gi|146400963|gb|ABQ29490.1| Glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum
JF-5]
gi|325049298|dbj|BAJ79636.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301]
Length = 275
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
YL + I + G + FLQ +++ DV A SA+LTPQG+ L F I + +
Sbjct: 8 AYLPARGVIGIEGPDRVAFLQGLVSNDVTKAEPGRAVWSALLTPQGRYLAEFFI-LTDGE 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNS-SFIDERFS 121
+ +L+ LI +L ++LRS V + + V +W + + D R
Sbjct: 67 SLLLDAPGVAVPDLIRRLSRFRLRSQVALRDRSDEFAVHAAWGGAPSAPGAIVAADPRLP 126
Query: 122 IADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A HR + D Y R+ G+ D + D P +A L+GI
Sbjct: 127 AAG---HRLLAPAPLAGAADETAYRAHRLALGLPD-HDDLEPEKTLLMEAGFGDLHGIDW 182
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQE+ +R ++R ++++R + + DLP +G+ I + E+GTL +G++
Sbjct: 183 DKGCYMGQELTARTRYRGLVKRRLVPVDAEADLPAAGA-ITAGEREVGTLRTSLGRRG 239
>gi|118594673|ref|ZP_01552020.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylophilales bacterium HTCC2181]
gi|118440451|gb|EAV47078.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylophilales bacterium HTCC2181]
Length = 298
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 43/290 (14%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S I+V G+ A FLQ IT D+ + + + + P+G++L +F I K+ D+F L
Sbjct: 15 SLIEVSGEDASTFLQGQITNDINLVNETTSVYAGLCNPKGRLLAFFHILKLH-DSFFLIC 73
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQ--------EHTFSNSSFIDE 118
+ +++ KL Y LRS V+I I + G + E+T + SF+ E
Sbjct: 74 PQCIAENIAKKLAMYVLRSKVVIAINTTIRLQGFEFAGEGLCDKVGFPENTNTMQSFLRE 133
Query: 119 RFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST--------- 164
+ R G N + S I T+ H +V+ + T
Sbjct: 134 GMHVT-----RISGINPRYLCLADNSTITTFMTAHKTH-VVEKTCECWKQTSITNKIPNI 187
Query: 165 -------IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLPP 215
P +DL+N I+ KGCY GQE+V+R + ++KR + +G L
Sbjct: 188 YLETQGKFIPQSLNLDLINAINFKKGCYTGQEIVARTHYLGTVKKRLFRGVWSGDKTLLN 247
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARID-KVDHAIKKGMALTVHGVRV 264
G+ ILT++ +G + K+ + + KVD ++K +AL H +R+
Sbjct: 248 LGNEILTNETLVGQVIDYSSDKSESDILFELKVD-SVKDHLALHGHSLRL 296
>gi|19115416|ref|NP_594504.1| iron-sulphur cluster biogenesis protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351677|sp|Q09929|CAF17_SCHPO RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|1067223|emb|CAA91966.1| iron-sulphur cluster biogenesis protein (predicted)
[Schizosaccharomyces pombe]
Length = 325
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 38/271 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKI----- 60
S++S I+V G A+ FLQ + T + +TL + G L QG++L F+ K+
Sbjct: 27 SSKSLIRVEGVDAVKFLQGL-TTNKITLDNPVYTG--FLNTQGRVLFDSFIYPKVSNNGT 83
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WN--QEHTFSNS 113
D +EID+ + L Y LRS I P + + W+ +E ++
Sbjct: 84 ENERSDELYVEIDKVAESDFLKHLKKYNLRSRCSIAKIPSEELSIKVIWDVKEESRLKDT 143
Query: 114 SFI--DERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
D RFS +L + T + + Y R +GI + + +PS FP +
Sbjct: 144 VAYAKDPRFSKQRLLRMIVPTSTCTSSSSGSLDDYKVFRYRNGIPEGPQEIIPSISFPLE 203
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PS------ 216
+ MD + GI KGCY+GQE+ R + + RKR P II +D P PS
Sbjct: 204 SNMDWMKGIDFHKGCYLGQELTVRTYYTGVTRKRIFPFIIPNYEDNPSQVIEPSAPLSIV 263
Query: 217 ---GSPILTDDIEIGTLGVVVGKKALAIARI 244
G P+ G + ++GK LA+ R+
Sbjct: 264 AKQGEPV--SRRSPGKIIAILGKVGLALVRL 292
>gi|326517503|dbj|BAK03670.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR
Sbjct: 242 ADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 301
Query: 199 IIRKR--PMIITGTDDLP-----PSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249
+IRKR P+ +D GS ++ D ++GT+ +G + + + R++
Sbjct: 302 VIRKRLLPLKFVDENDQELEQAVAPGSDVVDDASGKKVGTVSTALGSRGMGLLRLEA--- 358
Query: 250 AIKKGMALTV---HGVRVKASFPHWY 272
A+K+ +LT+ VRVKA P W+
Sbjct: 359 ALKENASLTISDNRDVRVKAIKPDWW 384
>gi|119174726|ref|XP_001239704.1| hypothetical protein CIMG_09325 [Coccidioides immitis RS]
gi|121752688|sp|Q1DK38|CAF17_COCIM RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
Length = 425
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58
V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+
Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103
Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107
+ E+ +++E+D+ + +L+ L +KLR+ + + GV W+
Sbjct: 104 TLPEENGGNEGMELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNA 163
Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149
+ D E + AD +G+ +A D + TY RI
Sbjct: 164 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLSQPLPGQQASLSTYTLRRI 222
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ +
Sbjct: 223 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 282
Query: 208 TGTDDLPP----SGSPILTDDIEI 227
T+D P SG P+ + D ++
Sbjct: 283 YNTEDPKPMPSSSGIPVYSPDSQL 306
>gi|326500300|dbj|BAK06239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR
Sbjct: 242 ADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 301
Query: 199 IIRKR--PMIITGTDDLP-----PSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249
+IRKR P+ +D GS ++ D ++GT+ +G + + + R++
Sbjct: 302 VIRKRLLPLKFVDENDQELEQAVAPGSDVVDDASGKKVGTVSTALGSRGMGLLRLEA--- 358
Query: 250 AIKKGMALTV---HGVRVKASFPHWY 272
A+K+ +LT+ VRVKA P W+
Sbjct: 359 ALKENASLTISDNRDVRVKAIKPDWW 384
>gi|225561737|gb|EEH10017.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 412
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 46/264 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT-----LPYKIARGSAILTPQGKILLYFLISKI 60
L ++ I V GK + FLQ ++T ++LT +P K +A L G++L I +
Sbjct: 47 LPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVP-KSGFYAAFLNAPGRVLHDVFIYPV 105
Query: 61 EED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHT 109
+ +++E+D+++ +L+ + +KLRS + + + WN+E
Sbjct: 106 PPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEEDA 165
Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHE 146
F + F+ D R G EK+ + D TY+
Sbjct: 166 GQLTECDFQLDNGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNL 222
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204
RI +G+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR P
Sbjct: 223 RRILYGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILP 282
Query: 205 MIITGTDD-LPPSGSPILTDDIEI 227
+ + D+ +P + +P + + ++
Sbjct: 283 VQLYDIDETMPKTETPYYSSESKL 306
>gi|332026993|gb|EGI67089.1| Putative transferase C1orf69-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 370
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 127/320 (39%), Gaps = 59/320 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEE-D 63
L ++S ++V G A FLQ +IT D+ L + L +G+++ ++ K EE +
Sbjct: 42 LIDRSILRVNGNEASFFLQGLITNDMKHLDEGAPSIYTLFLNIRGRVMCDAIVYKSEESN 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------NQEH 108
+ +E D DSL L Y++R I+I+ + + W N+
Sbjct: 102 LYYIECDSQIVDSLQRHLKMYRVRRK--IDIEHVGDKINVWSMFNSTKYLDNGAAVNETE 159
Query: 109 TFS--------------NSSFIDERFSIAD---------VLLHRTWGHNEKI-------- 137
F S F+D D +L+ NE I
Sbjct: 160 KFKLEGMIFPCGTFNSKTSKFVDNVMIYEDPRLPDLGLRILVESQISRNEIIKHLDADIA 219
Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ + Y R GI + D P P + D L+G+S KGCYIGQE+ +R H
Sbjct: 220 PSESLGDYKAFRYKLGIGEGMHDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTARTYH 279
Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIK 252
++RKR P++ D P + + ++ +G V K L + RI++ A
Sbjct: 280 TGVVRKRLMPLLFDNVIDKPFAYDEKILNESGNAVGKFRGCVAKYGLGLMRINESLSA-- 337
Query: 253 KGMALTVHGVRVKASFPHWY 272
L V G+ V+ P W+
Sbjct: 338 --RELNVSGMNVRVVKPAWW 355
>gi|39977165|ref|XP_369970.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15]
gi|158514087|sp|A4R8F9|CAF17_MAGO7 RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|145016089|gb|EDK00579.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15]
Length = 389
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61
L ++ I V G A +LQ ++TA+++ K +A L QG++L +Y SK +
Sbjct: 54 LKSRRLISVSGPDAAKYLQGVVTANIIN-NNKTGFYTAFLNAQGRVLHDVFIYPDASK-D 111
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116
+ F++E+D ++ + L + YKLR+ + + + +G W Q S + F
Sbjct: 112 GEGFLIEVDATEAERLTRHIKRYKLRAKLNLRLLD-DGEATVW-QAWDDSKADFAPAVGM 169
Query: 117 -----DERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIF 166
D R + + H + D+ +Y R G+ + T+ L
Sbjct: 170 TTPVRDPRSPMLGYRVLTPGDHAQTPQLDLDPTPETSYRIRRYLQGVAEGQTEILREHAL 229
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P ++ MD+ I KGCY+GQE+ R +HR ++RKR
Sbjct: 230 PAESNMDVTGAIDFRKGCYVGQELTIRTRHRGVVRKR 266
>gi|294925549|ref|XP_002778949.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887795|gb|EER10744.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 345
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 44/298 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSAI-LTPQGKILLYFLI 57
L ++ IKV GK + FLQ + T D+ + P + + +A+ L+P+G++L L+
Sbjct: 26 LKSRGLIKVSGKGTLNFLQGLCTQDISRVFGAKAEAPMEQSAAAAVFLSPKGRVLFDCLM 85
Query: 58 ----------------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV 101
E++ ++++D D+++ LF + R ++ + I+ ++ +
Sbjct: 86 YSGVSLKPDSSEGIVSDDKGEESLVVDVDEGVLDNVM--RLFIRHRVHLPLNIEKLDNLG 143
Query: 102 LSWNQEHTFSNSSF-----IDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVD 155
+ W + + + E + D+ L ++ A + Y LRI + +
Sbjct: 144 VYWTPSKSQNGCDGDTEVPVYEDPRVKDLGLRAILPKSDIDAESTEALYRRLRIGLVVPE 203
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213
+ P + P + +DL N I+ KGCYIGQE+ +R + +RKR M I G D+
Sbjct: 204 GPKEMTPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKRLFGMRIDGDVDV 263
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVRVKAS 267
SG+ I+ D +IG + + + L IA+I HA KGM + V+A+
Sbjct: 264 -ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA-PKGMQMNTKQAMVEAT 315
>gi|226530732|ref|NP_001147280.1| aminomethyltransferase [Zea mays]
gi|195609448|gb|ACG26554.1| aminomethyltransferase [Zea mays]
Length = 407
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR
Sbjct: 250 ADERHYQLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 309
Query: 199 IIRKRPMIITGTD-------DLPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDH 249
+IRKR M + D GS ++ + ++G + +G + + + R+++
Sbjct: 310 VIRKRLMPMKFVDGNGQELEQAVAPGSEVVDEASGKKVGAVSTALGSRGMGLLRLEE--- 366
Query: 250 AIKKGMALTVHG---VRVKASFPHWY 272
A+K G AL G VRV+A P W+
Sbjct: 367 ALKPGSALRAGGNRDVRVQAIRPDWW 392
>gi|156058962|ref|XP_001595404.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980]
gi|154701280|gb|EDO01019.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 411
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 134/349 (38%), Gaps = 94/349 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59
LS + I + G + +LQ +IT D+ K SA L QG++L I +
Sbjct: 71 LSTRRLISLRGPDSTKYLQGVITNDIYKEGNKNGFYSAFLNAQGRVLNDVWIYRDIYADL 130
Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-------------------- 94
E D +++E+D + + L + Y++R+ ++I
Sbjct: 131 KGDKTTEGDNWLIEVDAKQVEVLAKHIKRYRMRAKFDVDIVDEEEKKIYSLWGTKVGVRV 190
Query: 95 ---------QPINGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIAS 139
+ G+V S + N +++ + + A+V +H G N
Sbjct: 191 IDAQERDREKAQQGIVTSDTRAPGMGNRVIVNKGWHMHMDIQDAEVQMH---GEN----- 242
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
Y R G+ + + L + P ++ +D++ GI TKGCY+GQE+ R H +
Sbjct: 243 ---VYRARRYLIGVPEGQDEILRESALPQESNIDVMGGIDYTKGCYVGQELTIRTHHTGV 299
Query: 200 IRKR---PMIITGTDDLPPSG---------SPILTDDIEIGTLG---------VVVGKKA 238
IRKR M++ +D+P G + L I +G VG
Sbjct: 300 IRKRIVPMMLVPDGEDMPGLGELKYKGGHLASWLNGGENIKKVGGKRPVGKWLSGVGNLG 359
Query: 239 LAIARIDK-------------VDHAIKKGMAL---TVHGVRVKASFPHW 271
L +AR+D+ VD + +G V +RV+A P W
Sbjct: 360 LGLARLDEMGKWMVEEKEAGGVDEFVAEGKGEKEGEVRNIRVRAFPPAW 408
>gi|169613713|ref|XP_001800273.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15]
gi|121935220|sp|Q0UE25|CAF17_PHANO RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|111061204|gb|EAT82324.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15]
Length = 406
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYF-------LI 57
L ++S I + G +A FL +IT D + P+ +A L +G+++ LI
Sbjct: 59 LPHRSLIFLSGPTASKFLHGLITHDATRVSPFY----AAFLDARGRVICDVFIWVWPELI 114
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSN 112
++ +E+D + ++L+ L +KLR + I P G V +W H
Sbjct: 115 AQQGHWACYIEVDAGQANALMLHLKRHKLRHKLTISHVPAEGRDGIKVWAAWGDAH---- 170
Query: 113 SSFIDERFSIADVLLHRTWG--------HNEKIASDI-----KTYHELRINHGIVDPNTD 159
+ + IA + R G E IA D+ K Y R HG+ + + +
Sbjct: 171 -KQVKDWGEIAGLQDPRAPGMYRYLANADRETIARDMQPVDTKFYDIQRYIHGVPEGSAE 229
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P + P +A +DL +GI KGCYIGQE+ R +H ++RKR
Sbjct: 230 MPPYSTLPMEANIDLSSGIDFKKGCYIGQELTIRTKHTGVVRKR 273
>gi|220934636|ref|YP_002513535.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995946|gb|ACL72548.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
Length = 354
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+Q I G+ A FLQ + DVL L + ++ TP+G++L F + + E ++
Sbjct: 43 LSHQGLIVAYGEEAGSFLQGQFSNDVLGLASAHSHLNSYCTPKGRMLANFRVFRRGE-SY 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L + R+ +S++ +L + LRS V +E + + LS + ++ D ++
Sbjct: 102 YLRMPRAMVESVLKRLRMFVLRSKVTLEDADDALVRIGLSGPRAVEELQTALGDVPSAVN 161
Query: 124 DVLLH------RTWGHNEK------IASDIKTYHELRINHGIVD-------------PNT 158
DVL H R G + + + + + +++L + V PN
Sbjct: 162 DVLHHNDITAIRVPGPHPRFELYGELEAMKQLWNKLNVRCAPVGAGPWALLDILAGIPNV 221
Query: 159 DFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216
S F P A M L+ G+S KGCY GQEVV+R+ + +++R +T D PP+
Sbjct: 222 TPATSEAFVPQMANMQLIGGVSFKKGCYPGQEVVARMHYLGKLKRRMYRVTIDTDQPPAP 281
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
G+ IL G G + A +D H K MAL V
Sbjct: 282 GTEIL------GAGGGETEEDQAAGRIVDAQLHPDGKVMALAV 318
>gi|242094558|ref|XP_002437769.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor]
gi|241915992|gb|EER89136.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor]
Length = 414
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D + Y RI +G+ + +T+ P + + LN IS KGCYIGQE+++R HR
Sbjct: 256 ADERHYQLWRIENGVAEGSTEIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRG 315
Query: 199 IIRKRPMIITGTDD--------LPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVD 248
++RKR M + D+ + GS ++ + +IGT+ +G + + + R+++
Sbjct: 316 VVRKRLMPMKFVDENGQELEEAVVAPGSEVVDEASGKKIGTVNTALGSRGMGLLRLEE-- 373
Query: 249 HAIKKGMALTV---HGVRVKASFPHWY 272
A+K G AL + V+V+A P W+
Sbjct: 374 -ALKPGSALRISDNRDVKVQAIKPDWW 399
>gi|300113362|ref|YP_003759937.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
gi|299539299|gb|ADJ27616.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
Length = 347
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 48/285 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ A FLQ ++T DV + + ++ + + P+G++L F + + + +
Sbjct: 43 LSHLGLITVSGEDASDFLQNLLTNDVKEVNSQHSQLTGLCNPKGRLLAIFRLFQWNANLY 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------------------EIQPING-VVLSWN 105
L + S ++++ +L Y LR+ V + E++ G V ++ N
Sbjct: 103 -LRLPHSLLEAVLKRLSMYVLRAQVSLADVSDHFCRFGLVGSKARDELKRYLGRVPMAVN 161
Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDIKTYH----ELRINHGIV 154
+ + + RF + L + W K A+ T+ +R +
Sbjct: 162 EVQQTPDCCVLRVPGKPSRFEVVGEFDTLQKLWDELSKTATPAGTHFWELATIRAGVATI 221
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213
P T ++ P ++L GIS TKGCY GQEV++R+ +R +R + TGTD
Sbjct: 222 YPETQ---ASFIPQQVNLELKEGISFTKGCYPGQEVIARMHYRGKPSRRMFLAHTGTDQQ 278
Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK-----------ALAIARIDK 246
P G PI L +D +G +V + L +AR++K
Sbjct: 279 PQPGDPIYLANDEAKQVIGEIVTAQPAPEGGYDSLVVLQLARLEK 323
>gi|115466238|ref|NP_001056718.1| Os06g0134800 [Oryza sativa Japonica Group]
gi|55296974|dbj|BAD68449.1| glycine cleavage T protein-like [Oryza sativa Japonica Group]
gi|55297200|dbj|BAD68874.1| glycine cleavage T protein-like [Oryza sativa Japonica Group]
gi|113594758|dbj|BAF18632.1| Os06g0134800 [Oryza sativa Japonica Group]
gi|215686575|dbj|BAG88828.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 401
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 110/371 (29%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---------------GSAILTP 47
+ L++++ ++ G A FL++++T D+L R +A+LTP
Sbjct: 25 ACRLASRAVVRFAGPEAGRFLRSLLTNDLLLSSSSQQRYAPTPNAPARAPPPAYAALLTP 84
Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77
QG+ L + + + +L+ +D ++ D L
Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSS------------------ 114
+ Y+LRS V EI ++ L W N EHT ++
Sbjct: 145 LACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAE 202
Query: 115 ------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIV 154
F D R D L +R I +D + Y RI +G+
Sbjct: 203 SAAQGNGHGWEWFKDPRL---DCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVA 259
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212
+ +T+ P + LN IS KGCYIGQE+++R HR +IRKR M + D+
Sbjct: 260 EGSTEIPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENG 319
Query: 213 ------LPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HG 261
+ P GS ++ + +IGT+ +G + + + R+++ A+K+ +L +
Sbjct: 320 QELKQAVAP-GSEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRD 375
Query: 262 VRVKASFPHWY 272
VRVKA P W+
Sbjct: 376 VRVKAIKPDWW 386
>gi|71664696|ref|XP_819326.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884622|gb|EAN97475.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 320
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 41/306 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIE- 61
LS++S I+V G +A FLQ + T D+ L + L G+++ + S++
Sbjct: 7 LSSRSLIRVSGAAAHDFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRVHG 66
Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113
+ ++++ R D+L D LL ++R + I+ VV++ + ++ N
Sbjct: 67 GDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVAAS---SYGNGGIYEAEE 123
Query: 114 -------------SFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPN 157
+F+D R LH++ + + Y GI +
Sbjct: 124 EEEKTPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGP 183
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPP 215
F P+ FP + D L G+S KGCY+GQE+ R + RKR P+ + +
Sbjct: 184 DVFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETG 243
Query: 216 S-------GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKAS 267
S G +L D ++G L V G L + R+ VD A + L + V V +
Sbjct: 244 SGRRSVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLEDDVPVVIT 303
Query: 268 FPHWYK 273
P W++
Sbjct: 304 IPGWWE 309
>gi|269958426|ref|YP_003328213.1| aminomethyl transferase family protein [Anaplasma centrale str.
Israel]
gi|269848255|gb|ACZ48899.1| aminomethyl transferase family protein [Anaplasma centrale str.
Israel]
Length = 271
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 17/275 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59
M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAREPIYNLILNPRGRYVFDFFLIP- 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
E F+L+ + D+L + L Y+L+ V ++ V N++ ++
Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDA 118
Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D + W I D + Y LRI I + D + + FP
Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
MD LN ISL KGCYIGQE+V+R+ +K + + T L G I G +
Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTKTL-VCGQEIFAQGQPAGHM 237
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ L + ++K I G L G +K
Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268
>gi|255537089|ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549510|gb|EEF50998.1| aminomethyltransferase, putative [Ricinus communis]
Length = 391
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 141/364 (38%), Gaps = 102/364 (28%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS------------------A 43
S+ L+++S I+ G + FLQ ++T D+ + + A
Sbjct: 22 STSLLNSRSVIRFSGPDTVKFLQGLLTNDIRRFDETPSEATSFLPTPNLATVSVPPMYAA 81
Query: 44 ILTPQGKILLYFLI--------------SKIEEDT-----FILEIDRSKRDSLIDKLLFY 84
+LTPQG+ L + S D+ + ++D S D L+ Y
Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPGSDSNGSVELLADVDTSVLDELLHTFQRY 141
Query: 85 KLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---- 139
+LRS V EI+ + G W + + +S + + A V WG A+
Sbjct: 142 RLRSKV--EIENVAGEFSCWQRFGGNLTETSKVADEPEAASV----GWGSGVDRAARSST 195
Query: 140 ---------------------------------------DIKTYHELRINHGIVDPNTDF 160
+ K Y RI +G+ + +T+
Sbjct: 196 QGDGHGWQWFKDPRLDCLGFRGIFPSNQTPPLVEADKETNEKNYQLWRIENGVAEGSTEI 255
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII-----TGTDDL 213
P + + LN IS KGCY+GQE+V+R HR +IRKR P++ T ++
Sbjct: 256 PKGEAIPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDNGTEVEEK 315
Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASF 268
GS ++ T ++G + +G + L + R+++ A K +L + G ++V+
Sbjct: 316 VAPGSEVIDTTSSKKVGFVTAALGCRGLGVLRLEE---AWKGSGSLIIEGQDDLKVETIR 372
Query: 269 PHWY 272
P W+
Sbjct: 373 PKWW 376
>gi|218197511|gb|EEC79938.1| hypothetical protein OsI_21522 [Oryza sativa Indica Group]
Length = 401
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 110/371 (29%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---------------GSAILTP 47
+ L++++ ++ G A FL++++T D+L R +A+LTP
Sbjct: 25 ACRLTSRAVVRFAGPEAGRFLRSLLTNDLLLSSSTQQRYAPTPNAPARAPPPAYAALLTP 84
Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77
QG+ L + + + +L+ +D ++ D L
Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSS------------------ 114
+ Y+LRS V EI ++ L W N EHT ++
Sbjct: 145 LACFKRYRLRSKV--EIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAE 202
Query: 115 ------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIV 154
F D R D L +R I +D + Y RI +G+
Sbjct: 203 SAAQGNGHGWEWFKDPRL---DCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVA 259
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212
+ +T+ P + LN IS KGCYIGQE+++R HR +IRKR M + D+
Sbjct: 260 EGSTEIPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENG 319
Query: 213 ------LPPSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HG 261
+ P GS ++ + +IGT+ +G + + + R+++ A+K+ +L +
Sbjct: 320 QELKQAVAP-GSEVVDKESGKKIGTVNTALGSRGMGLLRLEE---ALKQNSSLAIKDNRD 375
Query: 262 VRVKASFPHWY 272
VRVKA P W+
Sbjct: 376 VRVKAIKPDWW 386
>gi|297809523|ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297318482|gb|EFH48904.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 93/352 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------------------SAILTP 47
L ++S ++ G + FLQ ++T DV +A+LTP
Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVSTPPMYAALLTP 94
Query: 48 QGKILLYFLI---SKIEED------------------TFILEIDRSKRDSLIDKLLFYKL 86
QG+ L F + SK EE ++D D L++ L Y+L
Sbjct: 95 QGRFLYDFFLYSPSKSEEKLNRTGSGPGSDSGHDGSVELFADVDVDVLDELLETLKKYRL 154
Query: 87 RSNVIIEIQPINGVVLSWNQ---------------------EHTFSNSSF-----IDERF 120
RS V +I+ + W + E T S + + D R
Sbjct: 155 RSKV--DIENVGEEFSCWQRYGRNLSGSSSVGWGGGVDRAGESTASGNKYGWQWYKDPRL 212
Query: 121 SI--------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
AD E +D Y R+ HG+ + + + P +
Sbjct: 213 ECLGYRSIFPADATPPLVEADKE---TDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PSGSPILTDDI 225
LN IS KGCY+GQE+++R HR +IRKR P+ ++ +G+ ++
Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKEVNQKIAAGAEVVESGT 329
Query: 226 --EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272
++GT+ +G + + + R V+ A K LTV V+V+A P W+
Sbjct: 330 GKKMGTVSTALGSRGMGVMR---VEEAFKPSAELTVKDLEDVKVEAIRPTWW 378
>gi|83644620|ref|YP_433055.1| aminomethyltransferase GcvT-like protein [Hahella chejuensis KCTC
2396]
gi|83632663|gb|ABC28630.1| predicted aminomethyltransferase related to GcvT [Hahella
chejuensis KCTC 2396]
Length = 330
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 38/272 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N + +++ G A+ F+Q T D+ + + +A TP+G+++ F I++ + D +
Sbjct: 29 LTNVALLEIKGPDAVKFMQGQFTCDIQEITISHSSLAACCTPKGRMVALFRIAQAKPDCY 88
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFI----DERF 120
+L + S + L YK+ + + GV+ LS + + S SS + D
Sbjct: 89 LLRLPVEVAQSFLAHLNKYKVFYKCTVTLLEDWGVIGLSGDLDSLPSLSSAVPTSADSCQ 148
Query: 121 SIADVLLHRTWGH---------------------NEKIASDIKTYHELRINHGI--VDPN 157
+ +LL R G+ N+ A ++ + L + G+ V P
Sbjct: 149 TSDGLLLIRPPGNLSRMECWLDSAQASKLLPDLDNQCAAGAVEDWERLEVLSGLGEVYPQ 208
Query: 158 T--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T +F+P + + L IS KGCY GQE+V+R+Q+ ++KR +++ P
Sbjct: 209 TLDEFIPQMLN-----LQALGAISFKKGCYTGQEIVARMQYLGTLKKRMFLLSSETITPA 263
Query: 216 SGSPILTD-DIEIGTLGVVVGKKALAIARIDK 246
GS I+ + IG+ VV + +A +DK
Sbjct: 264 PGSAIIDETGARIGS--VVRSAQGQTLAVLDK 293
>gi|189199100|ref|XP_001935887.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982986|gb|EDU48474.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 428
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYF-------LI 57
L ++ I + G A FLQ +IT +V L P +A L QG++L L+
Sbjct: 98 LPHRRLISLSGPDAAKFLQGLITNNVDLNQPKPFY--AAFLNAQGRVLWDVFVWVWPELL 155
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFI 116
++ ++ T +E+D + + L L +KLRS V EI+ I+G V W + +++ +
Sbjct: 156 AEEKQWTCYIEVDEREAEELKKHLKRHKLRSKV--EIEDISGDEVCVWAAWGSAADAR-V 212
Query: 117 DERFSIADVLLHRTWGHNEKIA-SDIKT------------YHELRINHGIVDPNTDFLPS 163
+ ++ D+ R + +A +D+K Y R +GI + +
Sbjct: 213 NANDTMVDMQDPRAPNFHRYLAYADVKALVPGTEPLSVTEYQIERYRYGIAEGPDEIPRE 272
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + DL +GI KGCY+GQE+ R +H ++RKR + IT L P P+
Sbjct: 273 DALPMEYNFDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITL--QLHPLAEPVEKI 330
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+E G+ I ID +K+G A
Sbjct: 331 IVESGS----------EIKTIDDTQIGLKRGRA 353
>gi|87198956|ref|YP_496213.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444]
gi|87134637|gb|ABD25379.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444]
Length = 248
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ ++T DV + + +A+LTPQGK+L F++ + +LE + S D+L +L
Sbjct: 29 FLQGLVTNDVKGV---LPVWTALLTPQGKVLFDFIVWP-DGKGLLLECEASAADALAKRL 84
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIA 138
Y+LR I I + + W +S D R L + W + +
Sbjct: 85 TLYRLRRK--IAISRADDLAAHWEDHPGDGGAS--DPRLRA----LGQRWIAPVSDNDVG 136
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
D+ Y E R+ G+ + + + + LNG+S TKGCY+GQE +R+ R
Sbjct: 137 VDM-AYREHRLKLGVPEGRAELGDGEVLWLECNAADLNGVSFTKGCYVGQENTARMNWRQ 195
Query: 199 IIRKRPMII 207
+ +R +++
Sbjct: 196 KVNRRLIVV 204
>gi|56552584|ref|YP_163423.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544158|gb|AAV90312.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4]
Length = 274
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L
Sbjct: 38 FLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDFILWA-EGSSILIDCESAIADNLIRRL 96
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
Y+LR + IEI P V S N + SSF D R S + ++ A I
Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSFPDPRLSELGFRWLQPATDSQPSAEAI 156
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I
Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R +I L I D+++ +
Sbjct: 215 RRLAVIKTDHPLDDDKCRIYYSDLKLAVM 243
>gi|56417181|ref|YP_154255.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries]
gi|56388413|gb|AAV87000.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries]
Length = 271
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 17/275 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59
M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIP- 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
E F+L+ + D+L + L Y+L+ V ++ V N++ ++
Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDA 118
Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D + W I D + Y LRI I + D + + FP
Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
MD LN ISL KGCYIGQE+V+R+ +K + + T+ L G I G +
Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTNTL-VCGQEISAQGQPAGHM 237
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ L + ++K I G L G +K
Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268
>gi|224124952|ref|XP_002329854.1| predicted protein [Populus trichocarpa]
gi|222871091|gb|EEF08222.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 96/357 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----------------TLP--YKIARGSAILTP 47
L ++S I+ G I FLQ ++T DV LP Y +A LTP
Sbjct: 27 LKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGTTSYVPTPNLPSVYVPPMYAAFLTP 86
Query: 48 QGKIL--LYFLISKIEEDTFI-------------LEIDRSKRDSLIDKLLF----YKLRS 88
QG+ L L+ + E+ LE+ S++D+LL Y+LRS
Sbjct: 87 QGRFLYDLFLYRKPLGEEKLDGSGSGPGSDSGGDLELFADVDSSVLDELLLTFKRYRLRS 146
Query: 89 NVII-----------------------EIQPINGVVLSW-NQEHTFSNSS---------F 115
V I E +P V S +H+ +SS F
Sbjct: 147 KVEIDNVAEDFSCWQRFGGNLAEKSKGEEEPEAASVGSGPGVDHSAMSSSHGNDVGWQWF 206
Query: 116 IDERFSIADVL-LHRTWGHNEK---IASDIKT----YHELRINHGIVDPNTDFLPSTIFP 167
D R D L L + E + SD +T Y RI +GI + +T+ P
Sbjct: 207 KDPR---VDCLGLRGVFPSKETPPLVESDKETNELNYLLWRIENGIAEGSTEIPIGEAIP 263
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--------LPPSGSP 219
+ ++ LN IS KGCY+GQE ++R HR +IRKR + + DD + P
Sbjct: 264 LEYNLEGLNAISFDKGCYVGQEFIARTHHRGVIRKRLLSLAFLDDSGKEVEQKVGPGSEV 323
Query: 220 ILT-DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
I T +IG + +G + L + R+ + A K +LT+ G ++V+A P W+
Sbjct: 324 INTASGKKIGYVTTALGCRGLGVLRLKE---AFKGSGSLTIQGQEDIKVEAIRPKWW 377
>gi|222475546|ref|YP_002563963.1| hypothetical protein AMF_881 [Anaplasma marginale str. Florida]
gi|254995349|ref|ZP_05277539.1| hypothetical protein AmarM_05374 [Anaplasma marginale str.
Mississippi]
gi|255003537|ref|ZP_05278501.1| hypothetical protein AmarPR_04834 [Anaplasma marginale str. Puerto
Rico]
gi|255004662|ref|ZP_05279463.1| hypothetical protein AmarV_05199 [Anaplasma marginale str.
Virginia]
gi|222419684|gb|ACM49707.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 271
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 17/275 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISK 59
M L ++S ++V G A FL I T DVL + + + IL P+G+ + +FLI
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIP- 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
E F+L+ + D+L + L Y+L+ V ++ V N++ ++
Sbjct: 60 -HEQNFLLDCASADADALTELLRSYRLQLKVRVKRCDDEYAVAVHPNTVDSGNAANFEDA 118
Query: 120 FSIADVLLHRTWGH-----NEKIASD----IKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D + W I D + Y LRI I + D + + FP
Sbjct: 119 ILFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHF 178
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
MD LN ISL KGCYIGQE+V+R+ +K + + T L G I G +
Sbjct: 179 AMDRLNAISLNKGCYIGQEIVARMWRIGAKKKLYTVFSDTKTL-VCGQEIFAQGQPAGHM 237
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ L + ++K I G L G +K
Sbjct: 238 LSTLEGWGLCLLEVEK----IADGCNLESGGTHLK 268
>gi|320592852|gb|EFX05261.1| aminomethyltransferase [Grosmannia clavigera kw1407]
Length = 409
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISK-- 59
L+++ I V G A FLQ IITA+++ AR SA L QG++L + +
Sbjct: 54 LASRRLISVAGPDAAKFLQGIITANMVPAAGASARPHGFYSAFLNSQGRVLHDVFVYRNT 113
Query: 60 -----IEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQ----E 107
+E D F++E+D + +L + Y+LR+ V +++ + + + +W +
Sbjct: 114 LSRPAVEIDPAFLVEVDAEQARTLEKHMRRYRLRAKVDVQLLDDDELAVWHAWGEGAASA 173
Query: 108 HTFSNSSFIDERFSIADVLLHR-TWGHNEKI------------ASDIKTYHELRINHGIV 154
+ ++ + ++ D W H A D Y R G+
Sbjct: 174 AAAAAATASPDVITVCDTRAPGLGWRHVAASSGLPPPLALAVDAVDEFAYRIRRYLWGVA 233
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ + P P ++ +DL+ GI KGCY+GQE+ R +HR ++RKR
Sbjct: 234 EGQREIQPGQALPLESNIDLMGGIDFHKGCYVGQELTIRTRHRGVVRKR 282
>gi|307190794|gb|EFN74663.1| Putative transferase C1orf69, mitochondrial [Camponotus floridanus]
Length = 371
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 59/320 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEE-D 63
L+++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K EE +
Sbjct: 42 LNDRSILRVSGNEASTFLQGLITNDMKHLVEGTSNIYTLFLNIRGRVMYDAIVYKTEESN 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDERF 120
+ +E D +SL L Y++R V +I+ I + W + + N +DE
Sbjct: 102 MYYIECDLQVVESLQRHLQMYRIRRKV--DIKHIGDKINVWSMFDSTKRYDNRPAVDENG 159
Query: 121 S--------------------IADVLLH----------RTWGHNE--------KIASDI- 141
I +++++ R ++ + SD+
Sbjct: 160 KRQLEGMIFPCGTLNSKASKFIDNIMIYEDPRLPDLGLRILAESQIDKREITKHLDSDVF 219
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y R GI + D P P + D L+G+S KGCY+GQE+ +R H
Sbjct: 220 LSENVANYKAFRYKLGIGEGVHDLPPGKALPLEINCDYLHGVSFHKGCYVGQELTARTYH 279
Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDIE--IGTLGVVVGKKALAIARIDKVDHAIK 252
++RKR P++ D P + + D+ + +G + K L + RI++ A +
Sbjct: 280 TGVVRKRLMPLMFDSIVDKPLAYDEKILDESDNVVGKFRGYIDKYGLGLMRINESLSARR 339
Query: 253 KGMALTVHGVRVKASFPHWY 272
L V G+ +K P W+
Sbjct: 340 ----LNVLGINLKVVKPTWW 355
>gi|296422045|ref|XP_002840573.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636792|emb|CAZ84764.1| unnamed protein product [Tuber melanosporum]
Length = 388
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 68/332 (20%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI----------- 57
+ I++ G+ A +LQ + T D+ + SA L QGK+L I
Sbjct: 38 RQLIEIHGRDAPKYLQGLTTGDIPMQSDSLGTYSAFLNAQGKVLYDIFIYPTNRNHRWRA 97
Query: 58 ------------------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN- 98
+++E F +E D D+L++ + YKL S + P
Sbjct: 98 QIEQKNFQPPGCPPTKKGPEVDEPGFFIECDIRSADALLNHIRRYKLSSKFHSRLIPKGE 157
Query: 99 -GVVLSWNQEHTFSNS----SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ W+ S D R + G N + D++ Y+ R+ HG+
Sbjct: 158 WDMWAIWDDHRLLPTSLGEIGCTDTRAPNLGKRVAVFGGKNIGVEVDVEVYNVRRMLHGV 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ + L ++ MD + G+ KGCY+GQE+ R H ++RKR P+ + +
Sbjct: 218 PEGQNEILNGGNIAQESNMDYMGGVDFRKGCYVGQELTIRTHHTGVVRKRVLPVQLFRPE 277
Query: 212 DLPPSG---------SPILTDDI-----------EIGTLGVVVGKKALAIARID------ 245
D P +P+L + G VG LA+ R++
Sbjct: 278 DPVPEKLTYDPNLDLAPLLPGETLNISKLEESGRSAGKFLRGVGNIGLALCRLEIMTDLE 337
Query: 246 ---KVDHAIKKGMALTVHG--VRVKASFPHWY 272
K + L V G +RVKA P W+
Sbjct: 338 NGRKREGKTVPEFKLDVEGSELRVKAFVPEWH 369
>gi|170090854|ref|XP_001876649.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648142|gb|EDR12385.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 51/256 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61
+ N+ I V G A FL ++++ + ++ SA+L QG++L LY +
Sbjct: 18 IPNRGIISVFGSQAFSFLNGLLSSSIGPQD-NGSQFSAVLNAQGRVLYDVFLYPSTNSAG 76
Query: 62 EDTFILEIDR--SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW----------NQEH 108
+ + LE D S+ L+ L + LRS V + ++ + SW ++
Sbjct: 77 KPGYFLEYDNRLSEAPPLLSYLKRHILRSKVQVRDVSEDYTLWASWGATEDQVWETQRQW 136
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASD--------------------IKTYHEL- 147
+++ S ++ + D + WG +E I D ++ Y +
Sbjct: 137 SWARSGALE---PVWDNPTYSPWGTDENIIHDRRAVGMGRRHLLKADQGSKVLRDYETVD 193
Query: 148 -------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
RI HG+ + N D T FP D+ +D + G+ KGCY+GQE+ R H II
Sbjct: 194 SEAYLLHRIIHGVPEGNMDIPAMTAFPMDSNLDAMGGLDFRKGCYVGQELTVRTYHTGII 253
Query: 201 RKR--PMIITGTDDLP 214
RKR P+++ D+ P
Sbjct: 254 RKRTFPVLLHKPDENP 269
>gi|320037549|gb|EFW19486.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 425
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58
V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+
Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103
Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107
+ E+ +++E+D+ + +L+ L +KLR+ + + GV W+
Sbjct: 104 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 163
Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149
+ D E + AD +G+ +A D + TY RI
Sbjct: 164 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRI 222
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ +
Sbjct: 223 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 282
Query: 208 TGTDDLPPSGS----PILTDDIEI 227
T+D P S P+ + D ++
Sbjct: 283 YNTEDPKPMPSSLRIPVYSPDSQL 306
>gi|168048459|ref|XP_001776684.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671976|gb|EDQ58520.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ + +T+ P + + LN IS KGCY+GQE+V+R HR +IRKR M +
Sbjct: 278 RLEQGVAEGSTEIPKGEAIPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLMPL 337
Query: 208 TGTDDLPPS-------GSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258
+ TD G+ +L I ++G + V+G +AL + R++ +
Sbjct: 338 SFTDTNGKEAQAAVAVGAEVLDKRIGKKVGKVSTVLGPRALGMIRLESAREGNNQLCIEN 397
Query: 259 VHGVRVKASFPHWY 272
H + VKA P W+
Sbjct: 398 QHDILVKAVRPKWW 411
>gi|88607941|ref|YP_505789.1| aminomethyl transferase family protein [Anaplasma phagocytophilum
HZ]
gi|88599004|gb|ABD44474.1| aminomethyl transferase family protein [Anaplasma phagocytophilum
HZ]
Length = 275
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 4 VYLS-NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++LS ++ IKV G A FL I T DVL + A + IL +G+ L F + K ++
Sbjct: 1 MFLSQSRGVIKVSGADAAKFLHNITTNDVLQMESPSAVYNLILNSKGRFLFDFFLIKCDK 60
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-------HTFSNSSF 115
F+L+ +R +I+ L Y++ V I+ V L Q T + +
Sbjct: 61 H-FLLDCEREAIMPIIELLRLYRVVLKVKIKSCDEYSVALDTKQRLGDPGYTKTLEDGTI 119
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHD 169
+ + ++ + H + D+ T Y LR+ + I + TD + FP
Sbjct: 120 VFQDPRCVNMGVRYIVPHTSSVQYDMPTSQTNTEYSMLRMVNTIPNCATDMVSGESFPLH 179
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D LN IS TKGCY GQEVV+R+ HR
Sbjct: 180 FGLDKLNAISHTKGCYTGQEVVARM-HR 206
>gi|260753760|ref|YP_003226653.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258553123|gb|ACV76069.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 274
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L
Sbjct: 38 FLQGLVTQDVFLLEKGEPLWSALLTAQGKVLYDFILWP-EGSSILIDCESAIADNLIRRL 96
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
Y+LR + IEI P V S N + SSF D R S + ++ A I
Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSFPDPRLSELGFRWLQPATDSQPSAEAI 156
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I
Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R +I L I D+++ +
Sbjct: 215 RRLAVIKTDHPLDDEKCRIYYSDLKLAVM 243
>gi|225426884|ref|XP_002262786.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 407
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR
Sbjct: 250 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 309
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR--------IDKVDHA 250
+IRKR + + DD + E+ + V GKKA + + +++ A
Sbjct: 310 VIRKRLLPLKFLDDSGKEMEQKVAPGSEV--INAVSGKKAGTVTTALECRGLGLLRLEEA 367
Query: 251 IKKGMALTVHG---VRVKASFPHWY 272
+K LT+ G V+V+A P W+
Sbjct: 368 LKGPSKLTIQGQEDVKVEAIRPEWW 392
>gi|170571134|ref|XP_001891614.1| aminomethyltransferase [Brugia malayi]
gi|158603797|gb|EDP39585.1| aminomethyltransferase, putative [Brugia malayi]
Length = 275
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ ++ GK FLQA++T D+ L A+ + +L +G+I+ ++ + + D
Sbjct: 9 LRHRGLLRAKGKEVFQFLQALVTNDIRRLVDGQAQYALLLNNRGRIVEDLILYR-QADEI 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIAD 124
++E DRS + L +K+ +V IE + + T D R S
Sbjct: 68 LIESDRSNQLKLRKLFEMFKIHKDVTIE--EVTERYVYHADSATNBIPGIQDPRVPSFGK 125
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVD-PNTDFLPSTIFPHDALMDLLNGISLTKG 183
+L + ++ + D Y E R + GI + PN +F + D++NG+S KG
Sbjct: 126 RILSKILPDDQTV--DENAYRERRFDFGIPEGPNEVAGELPLFMN---ADIMNGVSANKG 180
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
CY+GQE+ +R + IRKR + T + + +G+ I +D G + G+K LA+
Sbjct: 181 CYLGQELTARALNAPEIRKRLLPFTCKNMV--TGTLINSDGRRAGKVIACTGRKGLAL 236
>gi|157423031|gb|AAI53525.1| Zgc:153540 protein [Danio rerio]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 44 ILTPQGK----ILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L QG+ I+LY L E + +LE D + +DS++ L YK+R V + + P
Sbjct: 16 VLNVQGRTLYDIILYSLKGNPEGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLNVCPSL 75
Query: 99 GV--VLSWNQEH-------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------- 141
+ +L ++E T ++ + E+ +++ R + DI
Sbjct: 76 SLWALLPHSKEAILGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGN 135
Query: 142 -KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H +I
Sbjct: 136 TEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVI 195
Query: 201 RKR--PMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
RKR P+ ++ + GS + T+ + G V K L++ R+ HA K+ + L
Sbjct: 196 RKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQL 251
Query: 258 TVHG---VRVKASFPHWY 272
G V V+AS P W+
Sbjct: 252 KSSGDETVTVQASVPDWW 269
>gi|71019851|ref|XP_760156.1| hypothetical protein UM04009.1 [Ustilago maydis 521]
gi|74701127|sp|Q4P7A4|CAF17_USTMA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|46099873|gb|EAK85106.1| hypothetical protein UM04009.1 [Ustilago maydis 521]
Length = 403
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 44/229 (19%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL---------PYKIARGSAILTPQGKILLYFLIS 58
++ ++V G+ + LQ +++ DV L P + G + PQG++L I
Sbjct: 57 HRGVVQVSGRDTVKLLQGLVSNDVKALDSTTLTHQPPNMVYAG--FMNPQGRMLADVFIH 114
Query: 59 KIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEH---- 108
+ + ++L+ID SL+ + +KLRS V + ++ VV +W+
Sbjct: 115 RQPANQDGSPRWLLDIDSRTLPSLVAFIKKFKLRSKVKLTDLSTDYHVVQAWDSNSQAPP 174
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIASDIKTYHEL-----RINHGIV 154
T + ID R S A++L +A+ T L RI +G+
Sbjct: 175 TIAEKLSIDPRSPSIGYRGVLSAAEIL---------DVAAAASTVDGLEYTLHRITNGVA 225
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ DF ++ P + +D ++G+ KGCY+GQE+ +R H ++RKR
Sbjct: 226 EGALDFPQASSLPLENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKR 274
>gi|330797296|ref|XP_003286697.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum]
gi|325083295|gb|EGC36751.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum]
Length = 412
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 50/250 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59
V L ++S IKV G A+ LQ + T ++ L + S+I L G++L +IS
Sbjct: 15 VPLKSRSLIKVVGSDALKHLQGLTTNNLNRLKDSQSSNSSIYNGFLQSNGRLLFDSIISL 74
Query: 60 IEE------------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94
+E D+FI++ID + + + L YKLR+ + II++
Sbjct: 75 DKEHSIKQKAEFVISNGNGNGNGNGVVDSFIIDIDNAVLNDAVAHLKQYKLRNKIDIIDV 134
Query: 95 QPINGVVLSWNQEH-TFSNSSFI----DERFSIADVLLHRTWG---------------HN 134
V ++ + T N + DE S+ H+ G H
Sbjct: 135 TDQYRVYSILDKTYKTVRNDELLSILEDEGCSVMSDPRHQIMGVRLLVPSNKSSSIENHL 194
Query: 135 EKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
K + D + YH R++ GI + ++ ++ P + DLLNG+ KGCY+GQE+ SR
Sbjct: 195 AKYETMDEEIYHLFRLSQGIPEGRNEYQWGSVIPLEYNFDLLNGVDFHKGCYLGQELTSR 254
Query: 194 IQHRNIIRKR 203
Q +IRKR
Sbjct: 255 TQFTGLIRKR 264
>gi|194383620|dbj|BAG64781.1| unnamed protein product [Homo sapiens]
Length = 163
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
D+ YH+ R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H
Sbjct: 21 GDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMG 80
Query: 199 IIRKRPMIITGTDDLPPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253
+IRKR + D LP S G+ +LT + +G G LA+ +K+ +
Sbjct: 81 VIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHI 140
Query: 254 GMALTVHGVRVKASFPHWY 272
+ V + AS P W+
Sbjct: 141 RASEGAQ-VALAASVPDWW 158
>gi|332812159|ref|XP_003308851.1| PREDICTED: putative transferase CAF17, mitochondrial isoform 1 [Pan
troglodytes]
gi|119590268|gb|EAW69862.1| chromosome 1 open reading frame 69 [Homo sapiens]
Length = 163
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
D+ YH+ R G+ + D P P ++ + +NG+S TKGCYIGQE+ +R H
Sbjct: 21 GDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMG 80
Query: 199 IIRKRPMIITGTDDLPPS----GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKK 253
+IRKR + D LP S G+ +LT + +G G LA+ +K+ +
Sbjct: 81 VIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHI 140
Query: 254 GMALTVHGVRVKASFPHWY 272
+ V + AS P W+
Sbjct: 141 RASEGAQ-VALAASVPDWW 158
>gi|261189571|ref|XP_002621196.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081]
gi|239591432|gb|EEQ74013.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081]
gi|239613037|gb|EEQ90024.1| aminomethyl transferase [Ajellomyces dermatitidis ER-3]
gi|327356927|gb|EGE85784.1| aminomethyl transferase [Ajellomyces dermatitidis ATCC 18188]
Length = 437
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 63/300 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGS----AILTPQGKILLYFLISKIE 61
L ++ I + GK + FLQ ++T ++LT S A L G++L I +
Sbjct: 50 LPTRALITLTGKDSTSFLQGLVTQNLLTPQNTPVPQSGFYAAFLNAPGRVLHDVFIYPVP 109
Query: 62 ED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE--- 107
+ +++E+D+++ +L+ + +KLR+ + V WN+E
Sbjct: 110 PNDSYNGTSDLAYLIEVDKNEVTNLMKHMRKHKLRAKLAFRAMDEGELNVFSLWNEEDAG 169
Query: 108 ---HTFSNSSFIDERFSIADVLLHRTWGHN------EKIAS----------DIKTYHELR 148
+ F + F+ D R G EK+ + D TY+ R
Sbjct: 170 IMEYDFQLENGKSPPFTCVDT---RAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLRR 226
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
I HG+ + + + + P + MD++ I KGCY GQE+ R HR ++RKR P+
Sbjct: 227 ILHGVPEGQGEIIRESALPMECNMDIMGAIDFHKGCYTGQELTIRTHHRGVVRKRILPVQ 286
Query: 207 ITGTDD-----------------LPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245
+ D+ LPP+GS I G VG LA+ R++
Sbjct: 287 LYDMDEPIPETDVPNYSSESKLVLPPAGSNIAKVSSRKGRSAGKFLSGVGNIGLALCRLE 346
>gi|291614445|ref|YP_003524602.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
gi|291584557|gb|ADE12215.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
Length = 350
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I+V G+ A FLQ ++++DV + A+ S+ T +G++L FLI + D F
Sbjct: 43 LSQFGTIRVHGEEAQNFLQNLLSSDVNAVTPAAAQFSSFNTAKGRVLATFLIWRGGNDHF 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------------------IQPINGVVL 102
L++ R + KL Y LR+ +E + P VV+
Sbjct: 103 -LQLPRELVAPIQKKLSMYVLRTKAKVENAGDAFVSLGLSGPNANALVKELVGPPPEVVM 161
Query: 103 SW-------NQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149
+ Q+ F+ ++RF I A L + G + S + +R
Sbjct: 162 AVASTAHFDTQQSHFTVIRLGEQRFQINVAPGHAADLWKKLSGAARPVGSPCWDWLNIRA 221
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-T 208
++ P T P +DL+ ++ KGCY GQE+V+R+Q+ ++R +
Sbjct: 222 GIPVILPQTQ---EAFVPQMTNLDLIGAVNFKKGCYPGQEIVARMQYLGKNKRRMYLAHV 278
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+D LP G + + ++E G VV +
Sbjct: 279 FSDALPQPGDELFSTEMEGQACGTVVNAQ 307
>gi|115387399|ref|XP_001211205.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195289|gb|EAU36989.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1258
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 45/241 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55
L+++ I V G + FLQ +IT ++L P + R GS A L G+IL LY
Sbjct: 868 LTHRGLISVTGVDSTSFLQGLITQNMLVTNDPNRSTRRTGSYTAFLNSHGRILNDAFLYP 927
Query: 56 LIS-KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTF 110
L S E ++++EID+++ +L+ L +KLR+ ++++ ++ + +W
Sbjct: 928 LPSADAGESSWLIEIDKNEVPALMKHLKKHKLRAK--LKLRALDDGERTIWAAWKDHMEP 985
Query: 111 SNSSFIDER----FS----IADVLLHRTWGHNEKI----ASDIKT--------------- 143
+++ E FS IA + R G ++ A D++T
Sbjct: 986 RWAAYNLEAAAGPFSAAPEIAGCIDTRAPGFGSRLVTPGAEDLRTHLGENEVAGDEVELG 1045
Query: 144 -YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
Y R+ HGI + ++ + + P ++ MD+++GI KGCY+GQE+ R H ++RK
Sbjct: 1046 GYTVRRMMHGIAEGQSEIIRESALPLESNMDMMHGIDFRKGCYVGQELTIRTHHTGVVRK 1105
Query: 203 R 203
R
Sbjct: 1106 R 1106
>gi|296082848|emb|CBI22149.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR
Sbjct: 213 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 272
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGKKALAIAR--------IDKVD 248
+IRKR + + DD SG + + G+ + V GKKA + + +++
Sbjct: 273 VIRKRLLPLKFLDD---SGKE-MEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLN 328
Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272
A+K LT+ G V+V+A P W+
Sbjct: 329 EALKGPSKLTIQGQEDVKVEAIRPEWW 355
>gi|225470311|ref|XP_002267571.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 407
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D K Y R+ G+ + +T+ L P + + LN IS KGCY+GQE+++R HR
Sbjct: 250 TDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRG 309
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGKKALAIAR--------IDKVD 248
+IRKR + + DD SG + + G+ + V GKKA + + +++
Sbjct: 310 VIRKRLLPLKFLDD---SGKE-MEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLN 365
Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272
A+K LT+ G V+V+A P W+
Sbjct: 366 EALKGPSKLTIQGQEDVKVEAIRPEWW 392
>gi|241762172|ref|ZP_04760255.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373422|gb|EER63022.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 274
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ ++T DV L SA+LT QGK+L F++ E + +++ + + D+LI +L
Sbjct: 38 FLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDFILWA-EGSSILIDCESAIADNLIRRL 96
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
Y+LR + IEI P V S + SSF D R S + ++ A I
Sbjct: 97 TLYRLRRAIRIEIDPAIAVHWSLKPPENQAISSFSDPRLSELGFRWLQPATDSQPSAEAI 156
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
H R+ G+ + + +A LNG+S TKGCY+GQE +R+ R I
Sbjct: 157 WKKH--RLAWGVTEGQAELGLDKTLWLEANARELNGVSFTKGCYVGQENTARMNWRQKIN 214
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R +I L I D+++ +
Sbjct: 215 RRLAVIKTDHPLDDDKCRIYYSDLKLAVM 243
>gi|194365311|ref|YP_002027921.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3]
gi|194348115|gb|ACF51238.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3]
Length = 291
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 19/269 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + G A F A + DV LP + SA L+ +G+ L F + ++ ED
Sbjct: 15 LPGHQLLSLQGPDAAVFAHAQFSGDVTALPLLHWQWSAWLSAKGRTLTVFQLLRLAEDHV 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF 120
+L + D++ +L + R V + ++ V ++ S ++
Sbjct: 75 MLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAQTTGDGWEL 134
Query: 121 SIADVLLHRTW--GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIF-PHD 169
+ L RT G E A+ + + + + HG+ P + ++ P
Sbjct: 135 DLGSDALPRTLRIGATEAFAAGSEADEATFALAWRQADLRHGL--PRLEESQREVWTPQQ 192
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+D LNG S+ KGCY GQE+V+R H KR + + T +G + D +GT
Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAAPAQAGDGVQQDGTALGT 251
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALT 258
+ V G ALA+ ++ D ++ G A+
Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGDAVA 280
>gi|325982020|ref|YP_004294422.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
gi|325531539|gb|ADZ26260.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
Length = 342
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 41/301 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ I+ G A FLQ+ ++ D+ + +IA+ T +G+IL FL+ + + +
Sbjct: 43 LSHRGLIQFSGDDAKNFLQSQLSCDIREISSEIAQYGGYCTSKGRILASFLLWQ-KNQSV 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI----------IEIQPINGVVLSWNQEHTFSNSS- 114
I+++ S S I +L Y LRS V I + N VL+ + +NS
Sbjct: 102 IMQLPASLVASTIKRLSLYILRSKVQLTDISNACIRIGVAGPNVSVLTAEFCKSANNSDP 161
Query: 115 FIDERFSIADVLLHR------------TWGHNEKIASDIKT--YHELRINHGI--VDPNT 158
ID+ S+ V +R W ++ A+ + T + L I GI + P T
Sbjct: 162 VIDKEISMLHVANNRMEVITSLENAPAVWERLKQNANPVGTACWDWLDIQSGIPIILPET 221
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSG 217
T P +D + G+S KGCY GQE+V+R Q+ +++R ++ T + +G
Sbjct: 222 Q---ETFLPQMINLDAIGGVSFKKGCYPGQEIVARTQYLGKLKRRMFLVHLTTTETIKAG 278
Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ + D+ + G +V G ALA+ + V+ +L +++K S P
Sbjct: 279 DALYSADVVDQSCGNIVNIAPSPCGGYDALAVIQQSSVNTCNIHWQSLQGPTLKIK-SLP 337
Query: 270 H 270
+
Sbjct: 338 Y 338
>gi|68171279|ref|ZP_00544680.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia
chaffeensis str. Sapulpa]
gi|88657580|ref|YP_506966.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str.
Arkansas]
gi|67999294|gb|EAM85942.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599037|gb|ABD44506.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 278
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 26/277 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++S I G+ L T +VL L A S +L+P G+ + F I + +
Sbjct: 7 LPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGK-YV 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQE------HTFSNSS---F 115
+L+ ++++ +I K L YKL+ ++I+ + V V +Q +T+ F
Sbjct: 66 LLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTIFF 125
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK-------TYHELRINHGIVDPNTDFLPSTIFPH 168
D R S + L + ++K+ S+I+ Y LRIN+ + D D + T FP
Sbjct: 126 QDPRLS--KLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
M + I KGCYIGQE V+R+ + + II+ + ++ EIG
Sbjct: 184 QFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSF--CDTKVMCAQQEIG 241
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
L VG L + I +H L + G +VK
Sbjct: 242 RLLSNVGNIGLCLLDISS-EHDF---CNLKIGGAKVK 274
>gi|91776256|ref|YP_546012.1| glycine cleavage T protein (aminomethyl transferase)
[Methylobacillus flagellatus KT]
gi|91710243|gb|ABE50171.1| glycine cleavage T protein (aminomethyl transferase)
[Methylobacillus flagellatus KT]
Length = 334
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 46/283 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G+ A+ FLQ +T DV L I+ S +P+G++L FL + ++
Sbjct: 36 LSHYGLLSLEGEDAVTFLQGQVTNDVKKLDGNISHYSGYCSPKGRLLALFL-AFAQDGRL 94
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSF--IDE--- 118
L+ DR + + +L Y LRS V+I + + V ++ N N+ F I E
Sbjct: 95 YLQFDRGLLEPIAKRLRMYVLRSKVVIADRSDDTVRIGIAGNAAEAALNTRFSHIPETEY 154
Query: 119 -RFSIADVLLHRTWG---------------------HNEKIASDIKTYHELRINHGIVD- 155
+ S +++ R G + +D + I GI +
Sbjct: 155 AQVSQDGIIIIRLPGTLPRYELLSPAAQAAELWTALREHLVPADKADWDWREIQAGIPEI 214
Query: 156 ---PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTD 211
F+P + +DLLNGIS KGCY GQE+V+R + +++R + D
Sbjct: 215 VGATQEAFVPQMVN-----LDLLNGISFKKGCYTGQEIVARTHYLGKVKRRTHLAHIAVD 269
Query: 212 DLPPSGSPIL-TDDIEIGTL-----GVVVGKKALAIARIDKVD 248
P +G I+ D I G + G+ LA R++ V+
Sbjct: 270 AAPAAGEEIVDADGIAAGQIVRSAPNPTGGQDVLAELRLESVE 312
>gi|163856818|ref|YP_001631116.1| hypothetical protein Bpet2506 [Bordetella petrii DSM 12804]
gi|163260546|emb|CAP42848.1| conserved hypothetical protein [Bordetella petrii]
Length = 377
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 41/256 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---E 62
L + + + G A+ FL +T DV LP AR S T +G++L ++ + + E
Sbjct: 64 LPDYAVVAASGADALTFLHGQLTQDVAGLPADAARLSGYCTAKGRLLATLVLWRAQTMPE 123
Query: 63 DTFILEIDR----SKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-----HTF 110
+ E R ++RD +L+ +L + LR+ V + + P+ + + E +
Sbjct: 124 ASDAAEAARVYALTRRDLADALVKRLSMFVLRAKVKLAVAPLQAAGVWCSPEGLASLQSA 183
Query: 111 SNSSFIDERFSIADVLLH------------RTWGHNEKIASDIKTYHELRINHGIVD--- 155
+ + + A++ R W + ++ G D
Sbjct: 184 AGGALPTAAWQRAELATGTWIAAPSARGALRWWWIASEAQLQQAGALAAQLARGTPDQWR 243
Query: 156 --------PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
P +F P +DLL+G+S TKGCY GQEVV+R +R +++R
Sbjct: 244 GDDLAAGLPWVAAATQDLFIPQTLNLDLLDGVSFTKGCYPGQEVVARSHYRGTVKRRAAY 303
Query: 207 --ITGTDDLPPSGSPI 220
+ G D PP G+ I
Sbjct: 304 GRLDGQADPPPPGTDI 319
>gi|115313839|gb|AAI24382.1| Zgc:153540 [Danio rerio]
Length = 262
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 44 ILTPQGK----ILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L QG+ I+LY L + + +LE D + +DS++ L YK+R V + + P
Sbjct: 5 VLNVQGRTLYDIILYSLKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSL 64
Query: 99 GV--VLSWNQEH-------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------- 141
+ +L ++E T ++ + E+ +++ R + DI
Sbjct: 65 SLWALLPHSKEAVLGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACQQGN 124
Query: 142 -KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H +I
Sbjct: 125 TEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVI 184
Query: 201 RKR--PMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
RKR P+ ++ + GS + T+ + G V K L++ R+ HA K+ + L
Sbjct: 185 RKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRL---AHA-KETLQL 240
Query: 258 TVHG---VRVKASFPHWY 272
G V V+AS P W+
Sbjct: 241 KSSGDETVTVQASVPDWW 258
>gi|310791527|gb|EFQ27054.1| folate-binding protein YgfZ [Glomerella graminicola M1.001]
Length = 404
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG------SAILTPQGKIL----LYF 55
L ++ I V G A FLQ +IT D+ + K AR +A L G++L +Y
Sbjct: 54 LPSRRLISVAGPDAAKFLQGVITRDIAS---KEARARQTGFYAAFLNATGRVLHDVFIYP 110
Query: 56 LISKIEEDT----------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--S 103
++ + D F++E+D ++ + L + YKLR+ + + + + + +
Sbjct: 111 DLAGLGGDVAAESEQAGTRFLVEVDANEAERLAKHIKRYKLRAKLNVRLLATDEATVWHA 170
Query: 104 WNQ-------EHTFSNSSFIDERF-SIADVLLHRTWGHNEKIASDIK-----TYHELRIN 150
W+ + ++ D R + L+H G + D+ +Y R
Sbjct: 171 WDDGGKPMTTDAALLSTVTRDPRTPELGYRLVH---GRDTPPPLDLDATTEDSYTIRRYM 227
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208
G+ + + + P + MD +NGI KGCY+GQE+ R +HR ++RKR P +I
Sbjct: 228 QGVAEGQDEIIREHALPQETNMDYMNGIDYHKGCYVGQELTIRTKHRGVVRKRILPCMIY 287
Query: 209 GTDDLPPS 216
D P
Sbjct: 288 DVDRATPQ 295
>gi|4586118|emb|CAB40954.1| putative protein [Arabidopsis thaliana]
gi|7267914|emb|CAB78256.1| putative protein [Arabidopsis thaliana]
Length = 363
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 119/305 (39%), Gaps = 62/305 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV---------------------LTLPYKIARGSAI 44
L ++S ++ G + FLQ ++T DV +T P A A+
Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA---AL 91
Query: 45 LTPQGKILL-YFLISKIEEDT--------------------FILEIDRSKRDSLIDKLLF 83
LTPQG+ L +FL S D ++D D L++ L
Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y+LRS V +I+ + W + S D E +D
Sbjct: 152 YRLRSKV--DIENVAEEFSCWQRYGRNLTGSSSVGWGGGVDRAAPLVEADKE---TDESN 206
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y R+ HG+ + + + P + LN IS KGCY+GQE+++R HR +IRKR
Sbjct: 207 YLLWRLEHGVAEGSAEIPKGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKR 266
Query: 204 --PMIITGTDDLP-----PSGSPILTDDI--EIGTLGVVVGKKALAIARIDKVDHAIKKG 254
P+ ++ +G+ ++ ++GT+ +G + + + R V+ A K
Sbjct: 267 LIPLRFIDSNGKELNQKIAAGAEVVESGTGKKMGTVSTALGSRGMGVMR---VEEAFKPS 323
Query: 255 MALTV 259
L V
Sbjct: 324 AELAV 328
>gi|225708392|gb|ACO10042.1| Hypothetical protein C21E11.07 in chromosome I [Osmerus mordax]
Length = 364
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 57/309 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +++ + + G+ +LQ I+T D+ L P A + +L QG+ L ++ ++++
Sbjct: 64 LKHRTLLNIQGQDTRAYLQGIVTNDMELLKEPDHRAMYAHMLNVQGRTLFDIIMYRLKDA 123
Query: 64 ----TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------------I 94
+ +LE D + +DS++ L YKLR V I+
Sbjct: 124 EVGCSLLLECDSTVKDSILKHLKLYKLRRKVNIKPCPELTVWAVLPRDKVAGCQEIPNIT 183
Query: 95 QPINGVVLSWNQEHTFSNSSFI-DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
P ++ + + + D + + D++L G +E+ YH+ R G+
Sbjct: 184 PPEQALICEADPRNAEMGWRLVADSKVNPLDLILSCQLGDSEE-------YHKHRYAIGL 236
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII------ 207
+ D P ++ + + GIS +KGCYIGQE+ +R H ++RK M +
Sbjct: 237 PEGVKDLPLGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKPLMPVRLSAPA 296
Query: 208 ----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
G SG P IG LG+ + + LA A+ + + + + A+T+ G
Sbjct: 297 EGLEEGAQLQTQSGKPAGKHRAGIGQLGLSLIR--LAHAK-EPLTFKLFEDTAVTLEG-- 351
Query: 264 VKASFPHWY 272
S P W+
Sbjct: 352 ---SVPDWW 357
>gi|242022699|ref|XP_002431776.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517101|gb|EEB19038.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 328
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 35/301 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIE-ED 63
L+ +S +++ GK A +LQ +IT D+ L + + L +G++L +I E+
Sbjct: 17 LNERSLLRLSGKDANLYLQGLITNDMKHLESGASSMYTMFLNSKGRVLYDSIIYNTNIEN 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSFI 116
TF +E D + L D L+ +K+R V I++ V + N + ++ +
Sbjct: 77 TFYVECDSNASLYLKDHLMHFKVRRKVNIDLLSDEFSVWALAFKDYIINPKDVYNYKPVL 136
Query: 117 DE--------------RFSIADVLLHRTWGHN-----EKIA----SDIKTYHELRINHGI 153
+E R + + +N +KIA + Y LR N GI
Sbjct: 137 NELKKNLPQLIITNDPRLPSMGLRVLTPKDYNLVNEIKKIADVNVQEENFYKFLRYNLGI 196
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
+ + FP + D L+GIS KGCY+GQE+ +R H +IRKR M + ++
Sbjct: 197 GEGLNELPLEKCFPMEINGDYLHGISFHKGCYVGQELTARTYHTGVIRKRIMPLKFNEEV 256
Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ G PI + +G + G + + + +++ A+K +T + P W
Sbjct: 257 SITQPGIPIFSVSQLTKAIGKLFGVEQTSGLGLLRIEEALKANELITFEK-KCNTHRPFW 315
Query: 272 Y 272
+
Sbjct: 316 W 316
>gi|79470337|ref|NP_192950.2| aminomethyltransferase [Arabidopsis thaliana]
gi|22655070|gb|AAM98126.1| putative protein [Arabidopsis thaliana]
gi|30725630|gb|AAP37837.1| At4g12130 [Arabidopsis thaliana]
gi|332657699|gb|AEE83099.1| glycine cleavage T-protein family protein [Arabidopsis thaliana]
Length = 393
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 93/352 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV---------------------LTLPYKIARGSAI 44
L ++S ++ G + FLQ ++T DV +T P A A+
Sbjct: 35 LKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA---AL 91
Query: 45 LTPQGKILL-YFLISKIEEDT--------------------FILEIDRSKRDSLIDKLLF 83
LTPQG+ L +FL S D ++D D L++ L
Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151
Query: 84 YKLRSNVIIEIQPINGVVLSWNQ---------------------EHTFSNSSFIDERFSI 122
Y+LRS V +I+ + W + E T S + + + +
Sbjct: 152 YRLRSKV--DIENVAEEFSCWQRYGRNLTGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209
Query: 123 A--DVLLHRTWGHNEKI--------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
+ L +R+ ++ +D Y R+ HG+ + + + P +
Sbjct: 210 PRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLP-----PSGSPILTDDI 225
LN IS KGCY+GQE+++R HR +IRKR P+ ++ +G+ ++
Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKIAAGAEVVESGT 329
Query: 226 --EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272
++GT+ +G + + + R V+ A K L V V+V+A P W+
Sbjct: 330 GKKMGTVSTALGSRGMGVMR---VEEAFKPSAELAVKDSEEVKVEAIKPTWW 378
>gi|303314493|ref|XP_003067255.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240106923|gb|EER25110.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1262
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILL-YFLIS 58
V L N++ I + G + FLQ +IT +V++ + + + L QG++L F+
Sbjct: 881 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 940
Query: 59 KIEEDT---------FILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE 107
+ E+ +++E+D+ + +L+ L +KLR+ + + GV W+
Sbjct: 941 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 1000
Query: 108 HTFSNSSFID---ERFSIADVLLHRTWGHNEKIASD---------------IKTYHELRI 149
+ D E + AD +G+ +A D + TY RI
Sbjct: 1001 KNWETKDTGDVLREVITCADNRAP-AFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRI 1059
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR P+ +
Sbjct: 1060 LHGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQL 1119
Query: 208 TGTDDLPPSGS----PILTDDIEI 227
T+D P S P+ + D ++
Sbjct: 1120 YNTEDPKPMPSSLRIPVYSPDSQL 1143
>gi|170058333|ref|XP_001864877.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877457|gb|EDS40840.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 349
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 44 ILTPQGKILLYFLISKI---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100
+L G++L +I ++ + D F++E D D+L L +++R V EI P
Sbjct: 15 LLNTAGRVLFDTMIYRMSPEQSDHFLVECDAGLVDALRKHLTMFRIRKKV--EIAPAECS 72
Query: 101 VLS-WNQEHTFSNSSFIDERFSI-ADVLLHR------------------TWGHNEKIASD 140
V + ++QE+ E SI D L + H A
Sbjct: 73 VWAVFSQENGSLPEQASREGVSIYKDTRLAELGYRIITDKTVSLDTVKAAFPHGTAYAEG 132
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+Y E R + GI + +F FP ++ D ++G+S KGCYIGQE+ +R H ++
Sbjct: 133 -GSYLEHRFSLGIGEGVNNFPQGKCFPLESNCDYMHGVSFHKGCYIGQELTARTHHTGVV 191
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
RKR M +T + +P + P DD EI ++
Sbjct: 192 RKRLMPLTFENPVPNNELP---DDAEIKSV 218
>gi|115715690|ref|XP_001188789.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 269
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
L+ +S + V G+ A LQ ++T DV L + S L QG++L + +
Sbjct: 3 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSN 62
Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEH 108
D +++LE D + L L Y++R V +I ++ W+
Sbjct: 63 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWSIFSPGPTPPPS 120
Query: 109 TFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFL 161
SN S F D + + + G ++ + Y R G+ + +
Sbjct: 121 PGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELP 180
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLP--PSGS 218
P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I + +P P+G+
Sbjct: 181 PGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGT 240
Query: 219 PILT-DDIEIGTLGVVVGKKALAIAR 243
I T + +G + LA+ R
Sbjct: 241 SIKTAEGKNVGKFRCHLHHNGLALLR 266
>gi|255537315|ref|XP_002509724.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549623|gb|EEF51111.1| aminomethyltransferase, putative [Ricinus communis]
Length = 252
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
++ K Y RI +G+ + +T+ P + + LN IS KGCY+GQE+V+R HR
Sbjct: 101 TNEKNYQLWRIENGVAEGSTEIPKGEAIPLEYNLASLNAISFDKGCYVGQELVARTHHRG 160
Query: 199 IIRKRPMIITGTDD--------LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVD 248
+IRKR +++ DD + P GS ++ T ++G + +G + L + R+++
Sbjct: 161 VIRKRLLLLMFLDDSGTEVEEKVAP-GSEVIDTTSSKKVGFVTAALGCRGLGVLRLEE-- 217
Query: 249 HAIKKGMALTVHG---VRVKASFPHWY 272
A K +L + G ++V+ P W+
Sbjct: 218 -AWKWLGSLIIEGQDDLKVETIRPKWW 243
>gi|115955869|ref|XP_001192913.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 291
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 30/266 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
L+ +S + V G+ A LQ ++T DV L + S L QG++L + +
Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSN 84
Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEH 108
D +++LE D + L L Y++R V +I ++ W+
Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWSIFSPGPTPPPS 142
Query: 109 TFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFL 161
SN S F D + + + G ++ + Y R G+ + +
Sbjct: 143 PGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELP 202
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLP--PSGS 218
P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I + +P P+G+
Sbjct: 203 PGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGT 262
Query: 219 PILT-DDIEIGTLGVVVGKKALAIAR 243
I T + +G + LA+ R
Sbjct: 263 SIKTAEGKNVGKFRCHLHHNGLALLR 288
>gi|78485072|ref|YP_390997.1| glycine cleavage T protein (aminomethyl transferase)
[Thiomicrospira crunogena XCL-2]
gi|78363358|gb|ABB41323.1| glycine cleavage system T protein homolog [Thiomicrospira crunogena
XCL-2]
Length = 354
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++Q+ IKV G+ A FLQ +T D+ + + A+ SA PQGK+L + K +D
Sbjct: 44 LAHQALIKVTGEEAFDFLQGQLTNDLKDVSEQQAQLSAYCEPQGKVLAIMTVFK-HQDAL 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV---------------------------------II 92
L D S + +++ +L +K+RS V I
Sbjct: 103 YLSFDGSLKQTILQRLTMFKMRSKVELEDVSEQMIQVGYAGDFADLDVQRLLSTKIKNIY 162
Query: 93 EIQPINGVVLS-------WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
E++ + LS H +S +++ S+ D L N ++ + ++
Sbjct: 163 EVEQVQDEALSDIIAIKLPGPYHCYSFFGPVEQAKSLWDTL------KNNGEFTNTQDWN 216
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ I G P + S F L +D LN I+ KGC+ GQEV++R+ +R KR
Sbjct: 217 LIHIVSG--QPQVNDTTSNEFIAQFLNLDKLNAINFKKGCFPGQEVIARMFYRGKATKRM 274
Query: 205 MIITGTDDLP--PSGSPILTDDIE 226
M + + LP P + L D+ E
Sbjct: 275 MRLHLEEVLPLEPGETFKLMDEAE 298
>gi|149186024|ref|ZP_01864339.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21]
gi|148830585|gb|EDL49021.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21]
Length = 244
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYF 55
M++ L++++ +++ +S FLQ ++T+DV LP + +LTPQGK L
Sbjct: 1 MTATRLTSRAIVRLTPADDSESIADFLQGLLTSDVKQALPVY----AGLLTPQGKALFDM 56
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ +D +L+ + + L +L Y+LR + I + GV W + HT +
Sbjct: 57 IVWPAGDDGLLLDCEAEIAEELAKRLSLYRLRRKIDIAVDDTVGV--HW-EGHT-GDGGA 112
Query: 116 IDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
D R + L + W E S + Y R++ G+ + + +A+
Sbjct: 113 PDPRLAA----LGQRWLAPVAEDEGSADEAYRAHRLSLGVPEGRAELGDILWLETNAVE- 167
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L+G++ KGCYIGQE +R+ R+ I +R +++
Sbjct: 168 -LHGVAFDKGCYIGQENTARMNWRSKINRRLVVV 200
>gi|84999054|ref|XP_954248.1| long-chain-fatty-acid--coa ligase 5 [Theileria annulata]
gi|65305246|emb|CAI73571.1| long-chain-fatty-acid--coa ligase 5, putative [Theileria annulata]
Length = 1034
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 34/239 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+ K+CG+ + FLQ +I++D+ + + R + L+ QG I+ LI E D +
Sbjct: 693 LNNRVVTKLCGQDSFNFLQGLISSDLRLVRAQETRPALFLSSQGHIVAESLIFTHEGDFY 752
Query: 66 I--LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSSF 115
+ L+++ SK ++I+K KL S V + V + + E T N F
Sbjct: 753 LDSLKVNHSKILNIINK---RKLASKVYTKTTESEVYVNTSESDFYSHFQTEKTKENKDF 809
Query: 116 ID----------ERF-----SIADVLLHRTWGHN--EKIASDIKTYH-ELRINHGIVD-- 155
I R+ +I D + T G + EK ++ Y L +N+ ++D
Sbjct: 810 IKLLDTRNQFFGHRYYCISNNIVDGVDFNTLGKDNFEKNQENLSVYDIMLLMNNYVMDVM 869
Query: 156 -PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
F+ + P D + N +S KGCY+GQE+++RI ++ +I K + I +DD
Sbjct: 870 MSKPGFVEYKLMPFDLNLQNFNYLSANKGCYVGQEIINRINNKVLINKYKLYIALSDDF 928
>gi|254448752|ref|ZP_05062209.1| glycine cleavage T protein [gamma proteobacterium HTCC5015]
gi|198261593|gb|EDY85881.1| glycine cleavage T protein [gamma proteobacterium HTCC5015]
Length = 333
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 42/261 (16%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + +KV G A FL +++DV L ++ S+ +P+G + + + K+ D +L
Sbjct: 33 DDAILKVSGSDATEFLHGQLSSDVKNLQVGSSQLSSYSSPKGMVYSHCRLYKLSNDECLL 92
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------SNSSFID 117
+ RS S+ +L + LR+ V I + GV+L E + + F
Sbjct: 93 RLPRSLTVSVGKRLKMFVLRAQVEITVDESVGVLLLAGSEASALTPLCDDLPDTPDHFSQ 152
Query: 118 ERFSIADVL--LHRTWGH---------NEKIASDIKTYHELRINHGIVDPNT-DFL---- 161
SIA L + R G NE +++ KT L H DP+T D L
Sbjct: 153 SEHSIALKLPDIQRENGSLPYYEVVLSNEHLSTAWKT---LTQTHLACDPSTADLLRILS 209
Query: 162 ------PST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
PST + + L GIS KGCY GQE +++ Q+R +R + +TG +
Sbjct: 210 GEPHLSPSTTEQFVAQNLNLHLNGGISFKKGCYPGQEYIAKTQYRGRLRSQLFRLTGETE 269
Query: 213 LPPSGSPILTD---DIEIGTL 230
L P G+ + ++ + EIGT+
Sbjct: 270 LEP-GAALYSNPDSNTEIGTV 289
>gi|302417320|ref|XP_003006491.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261354093|gb|EEY16521.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 377
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 25/231 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--------SK 59
++ I V G FLQ +ITA++ P + +A LT G+IL I +
Sbjct: 46 SRRLISVSGPDTAKFLQGVITANI-NAPGPLY--AAFLTATGRILNDVFIYPDTLAIGAG 102
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQ-------EHTF 110
E +F++E D + L + YKLR+ + + + + WN + T
Sbjct: 103 APETSFLIEADADQAPVLAKHIRRYKLRAKFDVRLLDDSDARVWHLWNDAAPDPPAQSTA 162
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+ D R L R + D + Y R G+ + + L P
Sbjct: 163 AGDLMPDRRAPGMGYRLVRKGDAAPALDLEQVDEQAYTLRRYLRGVAEGQGEMLREHALP 222
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPS 216
++ +D + GI KGCY+GQE+ R +HR ++RKR P ++ D P+
Sbjct: 223 QESNLDYMGGIEYHKGCYVGQELTIRTKHRGVVRKRILPCVLYNEGDAMPT 273
>gi|313200647|ref|YP_004039305.1| folate-binding protein ygfz [Methylovorus sp. MP688]
gi|312439963|gb|ADQ84069.1| folate-binding protein YgfZ [Methylovorus sp. MP688]
Length = 344
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 45/274 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V G+ AI FLQ +T D+ L + + T +G++L FL + +
Sbjct: 42 LSHLGLLQVDGEDAITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFL-AFAHQGHI 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLSW--NQEH 108
L+++ S + ++ +L Y LRS V+I+ + I G + + + H
Sbjct: 101 HLQLNGSLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTEVH 160
Query: 109 TFS---NSSFID-----ERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
S N++ I RF I A L H + + + L I GI
Sbjct: 161 GISTQENATLIRLPGALPRFEIFTSQENAQELWQELEQHFDPVGQ--TGWDWLEIEAGI- 217
Query: 155 DPNTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209
+ P+T P +D L GI+ KGCY GQE+V+R + +++R +I +T
Sbjct: 218 ---PEIFPATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTA 274
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
TD +P G + + E +G +V +A A
Sbjct: 275 TDQIPAPGDEVFIGEGE--AVGQIVRSSGIAGAE 306
>gi|259489751|tpe|CBF90281.1| TPA: aminomethyl transferase, putative (AFU_orthologue;
AFUA_5G12430) [Aspergillus nidulans FGSC A4]
Length = 438
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 142/363 (39%), Gaps = 96/363 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL--TLPYKIAR--GS--AILTPQGKIL---LYFL 56
L+N+ I + G + FLQ ++T ++ P + R GS A L G+IL +
Sbjct: 42 LTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAFIYP 101
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSS 114
+++ +E +++E+D+ + L+ L +KLR+ + + V SW ++
Sbjct: 102 LTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPRWAA 161
Query: 115 FIDERFSIADVLLH--------------------------RTWGHNEK---IAS-----D 140
+ E S + H RT+ E IA+ D
Sbjct: 162 YNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGEEVD 221
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR ++
Sbjct: 222 LDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHRGVV 281
Query: 201 RKRPMIITGTDD---------------------LPPSGSPILTDDIEIGT-----LGVVV 234
RKR + + +D LPP+GS I G LG +
Sbjct: 282 RKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLGGI- 340
Query: 235 GKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASFPH 270
G LA+ R++ + D + G L V+VKA P
Sbjct: 341 GNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIVPT 400
Query: 271 WYK 273
W +
Sbjct: 401 WTR 403
>gi|77165932|ref|YP_344457.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|254434606|ref|ZP_05048114.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
gi|76884246|gb|ABA58927.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|207090939|gb|EDZ68210.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
Length = 347
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I + G+ A FLQ ++T DV + + ++ + + P+G++L F + + + F
Sbjct: 43 LSHFGLIAISGEDASDFLQNLLTNDVKEVNSQRSQLTGLCNPKGRLLAIFRLFQWNAN-F 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------------------EIQPINGVV-LSWN 105
L + S ++++ +L Y LR+ V + E++ G ++ N
Sbjct: 102 YLSLPHSLLEAVLKRLNMYVLRAQVSLADVSDHFCRFGLVGSQASDELKRYLGKAPMTTN 161
Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDI-KTYHEL---RINHGIV 154
+ + + RF + + L + WG K + + + EL R +
Sbjct: 162 EVQQAPDCCILRVPGEPSRFEVVGGMNTLQKFWGELTKTVTPVGANFWELTTIRAGVATI 221
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213
P T ++ P ++L G+S TKGCY GQEV++R+ +R +R + TD
Sbjct: 222 YPETQ---ASFIPQQVNLELREGVSFTKGCYPGQEVIARMHYRGKPSRRMFLAHISTDQQ 278
Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK 237
P G P+ L +D G +V +
Sbjct: 279 PQPGDPVYLANDEARQARGEIVAAQ 303
>gi|307211751|gb|EFN87746.1| Putative transferase C1orf69, mitochondrial [Harpegnathos saltator]
Length = 304
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
ASD Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H
Sbjct: 159 ASD---YRAFRYKLGVGEGVQDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTARTYHT 215
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHA 250
++RKR M +T + + P+ D+ + G VVG K L + RI++ A
Sbjct: 216 GVVRKRLMPLTFEN---IADKPLSYDEKILDQSGNVVGKFRGYTEKHGLGLMRINESLSA 272
Query: 251 IKKGMALTVHGVRVKASFPHWY 272
L V GV VK + P W+
Sbjct: 273 ----QQLNVAGVNVKVTKPAWW 290
>gi|317035207|ref|XP_001401302.2| transferase caf17 [Aspergillus niger CBS 513.88]
Length = 445
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 50/247 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55
L+N+ I + G + +LQ +IT ++L P + R GS A L QG++L LY
Sbjct: 49 LTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAFLYP 108
Query: 56 LI----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109
L + +E +++E+D+S+ SL+ L +KLR+ + + + V SW ++H+
Sbjct: 109 LPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASW-KDHS 167
Query: 110 ---------------------FSNSSFIDERF----------SIADVLLHRTWGHNEKIA 138
+ + +D R D+ H E
Sbjct: 168 EPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEGYG 227
Query: 139 S--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R H
Sbjct: 228 SEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRTHH 287
Query: 197 RNIIRKR 203
++RKR
Sbjct: 288 TGVVRKR 294
>gi|294011519|ref|YP_003544979.1| aminomethyltransferase [Sphingobium japonicum UT26S]
gi|292674849|dbj|BAI96367.1| aminomethyltransferase [Sphingobium japonicum UT26S]
Length = 245
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++
Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKEGEPRWTALLTPQGKALFDFILWAD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D I + + ++ D+L +L Y+LR V I + + + W E + D R
Sbjct: 61 GGDVLI-DCEGAQADALARRLALYRLRRKVA--ITRADELAVHWALE---APGKPFDPRL 114
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L HR W + R++ GI + + I +A L G+
Sbjct: 115 P---QLGHR-WIAPADEGDASAAFRAHRLSLGIFEGVGELGQDQILWLEANAGELGGVDY 170
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203
KGCY+GQE +R+ +RN + +R
Sbjct: 171 DKGCYVGQENTARMHYRNKVNRR 193
>gi|292490833|ref|YP_003526272.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
gi|291579428|gb|ADE13885.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
Length = 345
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I + G+ A LQ ++T D+ + + ++ + + P+G++L + + + + F
Sbjct: 41 LSHLGLIALTGEDASTLLQNVLTNDIGEVNAQRSQLTGLCNPKGRLLAILRLFQWDTN-F 99
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP------INGVVLSWNQEHTFSNS-SFID 117
L + S ++++ KL Y LR+ V +I+ + G+ S H + + ++
Sbjct: 100 YLSLPHSLLEAVLKKLNMYVLRAQVSLIDASEQYCCLGLAGLQASDELRHCLGKAPTAVN 159
Query: 118 E-----------------RFSIADVL--LHRTWGHNEKIASDIKTYH----ELRINHGIV 154
E RF + L + W K A + T+ +R +
Sbjct: 160 EVYQTSSCCVLRVPGDPPRFEVVGEFDALQKLWSKLSKTAVPVGTHFWELATIRAGIATI 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDL 213
P T + P ++L G+S TKGCY GQEVV+R+ +R +R + TD
Sbjct: 220 YPETQ---ESFIPQQVNLELTEGVSFTKGCYPGQEVVARMHYRGKPSRRMFLAHMITDKR 276
Query: 214 PPSGSPI-LTDDIEIGTLGVVVGKK 237
P G P+ L D E T+G +V +
Sbjct: 277 PQPGDPVYLADGKEGQTVGEIVAAQ 301
>gi|158512851|sp|A2R472|CAF17_ASPNC RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|134081987|emb|CAK46672.1| unnamed protein product [Aspergillus niger]
Length = 444
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 50/247 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIAR--GS--AILTPQGKIL----LYF 55
L+N+ I + G + +LQ +IT ++L P + R GS A L QG++L LY
Sbjct: 48 LTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAFLYP 107
Query: 56 LI----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT 109
L + +E +++E+D+S+ SL+ L +KLR+ + + + V SW ++H+
Sbjct: 108 LPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASW-KDHS 166
Query: 110 ---------------------FSNSSFIDERF----------SIADVLLHRTWGHNEKIA 138
+ + +D R D+ H E
Sbjct: 167 EPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEGYG 226
Query: 139 S--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R H
Sbjct: 227 SEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRTHH 286
Query: 197 RNIIRKR 203
++RKR
Sbjct: 287 TGVVRKR 293
>gi|255537081|ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549506|gb|EEF50994.1| aminomethyltransferase, putative [Ricinus communis]
Length = 258
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
++ K Y RI +G+ + + + P + + LN IS KGCY+GQE+V+R HR
Sbjct: 101 TNEKNYQLWRIENGVAEGSIEIPKGEAIPLEYNLACLNAISFDKGCYVGQELVARTHHRG 160
Query: 199 IIRKR--PMII-----TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDH 249
+IRKR P++ T ++ GS ++ T ++G + +G + L + R+++
Sbjct: 161 VIRKRLLPLMFLDDSGTEVEEKVAPGSEVIDTTSCKKVGFVTAALGCRGLGVLRLEE--- 217
Query: 250 AIKKGMALTVHG---VRVKASFPHWY 272
A K +L + G ++V+ P W+
Sbjct: 218 AWKGSGSLIIEGQDDLKVETIRPKWW 243
>gi|23012287|ref|ZP_00052410.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 114
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTL 230
MD L G+ KGCY+GQEVVSR+QHR R R + + D P G+ + +GT
Sbjct: 1 MDQLGGVDFKKGCYVGQEVVSRMQHRGTARTRILPLVYRDGPAPEPGTEVTAGARSLGTT 60
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
G G LA R+D++ A+ G + G
Sbjct: 61 GSAAGDWGLATIRLDRLGDALAAGEPVRAGG 91
>gi|158512691|sp|A1DDV0|CAF17_NEOFI RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
Length = 447
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 50/265 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLI-- 57
L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I
Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLVANDPSRATRRTGTYTAFLNSQGRVLNDAFIYP 107
Query: 58 --------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108
+ ++ +++E+D+++ SL+ L +KLRS + + ++ V S ++H
Sbjct: 108 MPKGDGETATTDDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167
Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139
+ + + S+A + R G ++ +
Sbjct: 168 SEPRWAAYNLESESSSPFSPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGS 227
Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H
Sbjct: 228 EVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHT 287
Query: 198 NIIRKR--PMIITGTDDLPPSGSPI 220
++RKR P+ + LP +P+
Sbjct: 288 GVVRKRIVPVQLYAKSPLPSGETPV 312
>gi|33151540|ref|NP_872893.1| hypothetical protein HD0303 [Haemophilus ducreyi 35000HP]
gi|33147760|gb|AAP95282.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 295
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V LS+ I + G A +LQ +T DVL K+A G LT P+GKI F I
Sbjct: 16 CVELSDYRLIGIAGVDAASYLQGQLTCDVL----KLAIGEHTLTCHCDPKGKISALFRIY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFI 116
+ E F + I + +L Y + S V P+ GV NS+ +
Sbjct: 72 RAAEQQFFMIIHNDLLAEALVQLKKYAVFSKVTFTPLTTPLYGVTGHEQLAKISENSTAL 131
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDALM 172
+ ++ WG + D + + I GI + N +F+P + H
Sbjct: 132 LLNQAQKRAII---WGEDLVTNGDCSLWDLMDIQDGIPILLKANQFEFIPQAVNLHA--- 185
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ N IS TKGCY+GQE V+R ++R + ++ + G D P + + IEI
Sbjct: 186 -IENAISFTKGCYMGQETVARAKYRGVNKRAMFTLVGVFD-GQVALPQIAESIEI 238
>gi|256371884|ref|YP_003109708.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331]
gi|256008468|gb|ACU54035.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331]
Length = 274
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKIEEDTFILEI 69
++V G+ A +LQ ++ DV TL +G S +L G ++ + + ++ +D F L +
Sbjct: 29 VQVTGRDAARYLQGQLSQDVSTLKAD-GQGAISVLLGVDGHLVTWLRVRRLADDAFWLVV 87
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ + + +L +++R+ IE ++P G+ W + ++ F+D
Sbjct: 88 AEAHGERVRQRLEHFRIRTQATIELLPGHLHVRPPEGLEPLWPLDQ---DAPFVDA---- 140
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+D+ +H R+ G DP +D + + H + +S TK
Sbjct: 141 ---------------PADLARFHAERLVAGAFDPASDLV-DGLLAHGVPTLVERAVSFTK 184
Query: 183 GCYIGQEVVSRIQHRN 198
GCY GQE+V+R R
Sbjct: 185 GCYTGQELVARTSSRG 200
>gi|115959466|ref|XP_001183295.1| PREDICTED: similar to GA20785-PA [Strongylocentrotus purpuratus]
Length = 277
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
L+ +S + V G+ A LQ ++T DV L + S L QG++L + + +
Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSK 84
Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
D +++LE D + L L Y++R V +I ++ W+ FS
Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWS---IFSPGPTP 139
Query: 117 DERFSIADVLLH-----RTWGHNEKI----ASDIKTYHEL--------RINHGIVDPNTD 159
H R G +++ S + E+ R G+ + +
Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT 210
P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR P+ + GT
Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGT 252
>gi|85373394|ref|YP_457456.1| aminomethyltransferase [Erythrobacter litoralis HTCC2594]
gi|84786477|gb|ABC62659.1| predicted aminomethyltransferase [Erythrobacter litoralis HTCC2594]
Length = 246
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 22 FLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80
FLQ ++T DV TLP + +LTPQGK L F++ + +++ + D +
Sbjct: 30 FLQGLVTNDVKGTLPAY----AGLLTPQGKALFDFIVWPSGKGELLVDCEADLADEFAKR 85
Query: 81 LLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140
L Y+LR IEI + V + W Q H + + D R +AD+ ++ S
Sbjct: 86 LSLYRLRRK--IEIARDDSVAVHW-QPH-IGDGAANDPR--LADLGQRWLAPVSDADESA 139
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + + R++ G+ + + +A+ LNG+S KGCY+GQE +R+ R I
Sbjct: 140 DEAWRKHRLSLGVPEGRAEMGDILWLETNAVE--LNGVSFGKGCYVGQENTARMNWRQKI 197
Query: 201 RKRPMII 207
+R +++
Sbjct: 198 NRRLVVV 204
>gi|254490944|ref|ZP_05104126.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxidans DMS010]
gi|224463853|gb|EEF80120.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxydans DMS010]
Length = 315
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ S I V G A FLQ ++T V L A+ + + +P+G++L F + K E+D
Sbjct: 25 LADLSIIIVSGDDAGSFLQNLLTNAVNALKPHQAQLNGLCSPKGRLLAIFQLIKREQDYL 84
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
I+ + +++ +L +KLRS V I + V N ++ ++ + S ++
Sbjct: 85 IV-LPAELAEAIAQRLSMFKLRSKVDIALSDSLAAVGIINPDNKMTDLPSTTMQGSETEL 143
Query: 126 -LLHRTWGHNEK---IASDIKT------------------YHELRINHGIV----DPNTD 159
LL + G + + I KT + L I G+ D
Sbjct: 144 GLLIKQAGQSPRFLAICEKDKTLLLSEWLTDGWQLTTQAFWQLLDIEAGVPAIFNDSKEQ 203
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGS 218
F P + ++L+ G+S KGCY GQEVV+R+ + +R + G+ +LP + +
Sbjct: 204 FTPQQVN-----LELVGGVSFKKGCYPGQEVVARLHYLGSPNRRMFLARVGSGELPQANT 258
Query: 219 PILTDDIEIGTLGVVV 234
P+ DD TLG VV
Sbjct: 259 PVSDDDDN--TLGHVV 272
>gi|261330733|emb|CBH13718.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 339
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 56/322 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61
LS+++ ++V G A FLQ + T D+ L + L G+++ LY E
Sbjct: 7 LSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPE 66
Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------- 103
+ T ++++ D+L++ L Y++R + I VV++
Sbjct: 67 GQATIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDSAGS 126
Query: 104 --------WNQEHTFSNSSFIDERFSIADVLLH-RTWGHNEKIASDI------------- 141
+ + S +D ++A+ R++ + I
Sbjct: 127 SPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSE 186
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R
Sbjct: 187 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 246
Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
KR P+ + G + P ++ + ++G + G L + R++ VD +
Sbjct: 247 KRTVPLFLQGELFDGKEGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 306
Query: 253 K--GMALTVHGVRVKASFPHWY 272
G++L+ G V A P W+
Sbjct: 307 SFPGLSLS-DGTTVDARIPEWW 327
>gi|182412329|ref|YP_001817395.1| folate-binding protein YgfZ [Opitutus terrae PB90-1]
gi|177839543|gb|ACB73795.1| folate-binding protein YgfZ [Opitutus terrae PB90-1]
Length = 277
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A FLQ T D+ + G L + ++L + + ED F + +
Sbjct: 1 MSGPDAFTFLQGQFTNDLRAIAAGPVYG-LWLNQKARVLADSFVFRTAEDEFWVGSYFAA 59
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIAD---VLLH 128
++ ++L Y + +V +E + + V L+ + N S + RF A +
Sbjct: 60 ARTISERLEAYIIADDVTVEDRTASWVGLTVSGSEVGENVSRTLRERRFEFAGRRGIDQA 119
Query: 129 RTW--------GHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
R W NE++ ++ R+ I TD P + P++ ++ +
Sbjct: 120 REWFLPIEEAERVNERLGGAVELNAAEMERRRVGARIPAVPTDIGPGEL-PNEGGLEAV- 177
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
IS TKGCY+GQEV++R++ +R+R ++ GTD +P +P+ + ++G L
Sbjct: 178 AISYTKGCYLGQEVIARLRSMGQVRRRLFLVRGTDAMPARPAPLFQGERQLGEL 231
>gi|302803303|ref|XP_002983405.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii]
gi|300149090|gb|EFJ15747.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii]
Length = 406
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D + Y R+ GI + + P + ++ LN I KGCY+GQE+V+R HR +
Sbjct: 262 DEQYYLLWRLEQGIPEGPAEIRGGEAIPLEYNLEGLNAIDFDKGCYVGQELVARTHHRGV 321
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEI---------GTLGVVVGKKALAIARIDKVDH- 249
IRKR M + D S ++ EI GT+ +G + A+ R++ V
Sbjct: 322 IRKRVMPVIFLDKDGEEISEAVSHGAEIVDAESSKKMGTVTTALGSRGFALVRLEAVSKR 381
Query: 250 -AIKKGMALTVHGVRVKASFPHWY 272
+I GMA ++VK P W+
Sbjct: 382 LSIGGGMA----SIQVKVLRPKWW 401
>gi|290996284|ref|XP_002680712.1| predicted protein [Naegleria gruberi]
gi|284094334|gb|EFC47968.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y +R+ GI + + D + FP ++ + + GI KGCY+GQE+ +R HR IRKR
Sbjct: 306 YERIRLLSGIAENSVDIPSDSAFPMESGFEQIGGIHFGKGCYVGQELTNRTFHRGEIRKR 365
Query: 204 PMIITGTDDLPPSGSPI 220
+II G D LP +GS +
Sbjct: 366 IVIIKG-DKLPEAGSDL 381
>gi|149926475|ref|ZP_01914736.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter
sp. MED105]
gi|149824838|gb|EDM84052.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter
sp. MED105]
Length = 350
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS+ +LS I V G A+ FLQ+ ++ DV + R + + T +G++L F + +
Sbjct: 51 MSAQFLSRWGVIGVDGDDAVTFLQSQLSNDVAGMAESQLRMAGLCTAKGRLLGSFFVLRH 110
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQE 107
+ F++ + +L+ +L + LRS + + P + + + W+++
Sbjct: 111 GKQVFLV-CRQETVTALVKRLSMFVLRSKCKVRDCTADYQLAFVPDSGPTSPMRVQWDEQ 169
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNTD-FLP 162
T + +S S L G E+ ++ + +L I + + P + F+P
Sbjct: 170 GT-ATASLRALNGSTPGFQLVVGNGKTEQSSAADDQFEFALQQLGIAY-VSQPTVEMFIP 227
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
I DL+ G+S +KGCY GQE+V+R + +++R T T L
Sbjct: 228 QAI-----NFDLVGGVSFSKGCYPGQEIVARSHYLGKVKRRVFQATATGSL 273
>gi|149197871|ref|ZP_01874920.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155]
gi|149139092|gb|EDM27496.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155]
Length = 554
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ A LQ T+DV L K A+ S++L PQGKI+ + + K++E F L +
Sbjct: 25 LRVSGEDADKVLQGQSTSDVKVLGAKTAQLSSLLNPQGKIISHHFLIKLDEACFYLLCSK 84
Query: 72 SKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVLSWNQEHTFSNSSFIDER 119
S D + D L + + + +EI P + ++ + N ++ ++
Sbjct: 85 SVIDEVKDHLEKHIIMEDADLEICKSFKTFHLKNTDPSSELISNMNIHQIEPEKLYVHDQ 144
Query: 120 FSI---------ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ + +L+ + + + D +T+ R+ G + D+ T+ P
Sbjct: 145 HLLLTMGMLGLDSSILITKDGSQPDLGLEMDDETFKAFRMEAGFPIMDHDYDQKTLLPET 204
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPMIITGT--DDLPPSGSPILTDDIE 226
L L+ +S TKGC+ GQE+V+R+++R N+ R +I +DL + + D +
Sbjct: 205 GLQ--LHCVSYTKGCFTGQEIVARVKYRGNVNRYLSALIANEVPNDLQQNDTLSTIDGNK 262
Query: 227 IG 228
IG
Sbjct: 263 IG 264
>gi|293390940|ref|ZP_06635274.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951474|gb|EFE01593.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 295
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
LS+ + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + +
Sbjct: 17 LSHYTLIEMAGVDAEKYLQGQLTCDVT----KLAAGESTLTAHCDPKGKMSALFRLIRQD 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
E TF + + S +D+L Y + S V P++ ++ I +
Sbjct: 73 EQTFYMLLKSELLPSALDQLKKYAVFSKVTFT--PLDWQIIGAAGAKGIEKCGQISAQIR 130
Query: 122 IA-------DVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170
+A +LL+ T E A + + L I G+ V F+P +
Sbjct: 131 VAVNDRQPRVILLNPTRLSIEPTA-EANVWDLLDIQDGVPGLAVATQLQFIPQAL----N 185
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
L + IS KGCYIGQE V+R ++R ++ I T+ LP GSP+
Sbjct: 186 LQSIEQAISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236
>gi|253998575|ref|YP_003050638.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4]
gi|253985254|gb|ACT50111.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V G+ I FLQ +T D+ L + + T +G++L FL + +
Sbjct: 42 LSHLGLLQVDGEDTITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFL-AFAHQGHI 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLSW--NQEH 108
L+++ + ++ +L Y LRS V+I+ + I G + + + H
Sbjct: 101 HLQLNGRLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTEVH 160
Query: 109 TFS---NSSFID-----ERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDP 156
S N++ I RF I A W E+ + + L I GI
Sbjct: 161 GISTQENATLIRLPGALPRFEIFTAQENAQELWQELEQHFDPVGQTGWDWLEIEAGI--- 217
Query: 157 NTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD 211
+ P+T P +D L GI+ KGCY GQE+V+R + +++R +I +T TD
Sbjct: 218 -PEIFPATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATD 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALA 240
LP G + + E +G VV +A
Sbjct: 277 SLPQPGDEVFAGEGE--AVGQVVRSSGIA 303
>gi|16272414|ref|NP_438627.1| hypothetical protein HI0466 [Haemophilus influenzae Rd KW20]
gi|260580471|ref|ZP_05848299.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
gi|1175250|sp|P44000|Y466_HAEIN RecName: Full=Uncharacterized protein HI_0466
gi|1573444|gb|AAC22125.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092813|gb|EEW76748.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
Length = 280
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T + S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPNFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EKRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|299470070|emb|CBN79247.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 376
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 56/240 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLISK 59
+ L ++ +++ G A LQ ++T D+ L + +A L P+G+++ L++
Sbjct: 6 AAVLEGRAVLEISGVDAKALLQGLMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVT- 64
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEH----- 108
RS R K L YKLRS V I+ ++GV W
Sbjct: 65 -----------RSPRHEAKGKPL-YKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGG 112
Query: 109 ---------------TFSNSSFIDERFSIADVLLHRT----------WGHNEKIASDIKT 143
+ F D R + V L R W + + + +
Sbjct: 113 DVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGPDGADWPDGDPVVPEGR- 171
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
YH LR+ +G+ + ++ L S P ++ +DLL IS TKGCY+GQE+ +R Q + +RKR
Sbjct: 172 YHALRMANGVGE-GSELLDS--IPLESNLDLLGSISFTKGCYVGQELTARTQFKGFVRKR 228
>gi|117927009|ref|YP_867626.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
sp. MC-1]
gi|117610765|gb|ABK46220.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
sp. MC-1]
Length = 328
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 49/311 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--KIE 61
V S+ + G FL +IT + + + A + +LTPQG+ L F+I+ +++
Sbjct: 20 VDWSHTGVATITGDERKDFLSGLITNQIKRVTPECAIYAGLLTPQGRYLWDFIIAEQQMD 79
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------------- 93
E+ +L + +LI +L Y LR+ +
Sbjct: 80 ENPRLLLLTEPGIQNLIGRLSMYLLRAKAKVSDASTTLGSLIVTGPQAPQVLTRLYADID 139
Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ P GV++ + H + E+ + ++ + +
Sbjct: 140 FANQEPGTTVAPEAGVLVLKDPRHAAFGWRLVAEQAQLPNLWERLQAAQATPVG--FHAW 197
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
R+ + D P +A + G+ TKGCY+GQE +R HR ++KR
Sbjct: 198 ESYRVAQALPRGGNDLEADITLPLEAGFLEMQGVDFTKGCYVGQETTARTHHRGTLKKRL 257
Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVH 260
+ + P I++ +D E G L + G +ALAI R+ + G L +
Sbjct: 258 FQVRWQEAASPKLGDIISVGEDKEAGHLTSISPAGGEALAIIRVSDWE----SGKPLMLG 313
Query: 261 GVRVKASFPHW 271
++ + P W
Sbjct: 314 QTPLQVTKPAW 324
>gi|269101838|ref|ZP_06154535.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161736|gb|EEZ40232.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 323
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + + G+ A +LQ +T DV++LP + + A +GK+ F + ++
Sbjct: 26 LHDWAAVTLVGQDAKSYLQGQVTCDVVSLPEQESTLGAHCDAKGKMRTIFRLFHHQQGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++ +S DS + +L Y + S V EI+P N V+L +FID+ F+
Sbjct: 86 YIQ-RQSVMDSQLPELKKYAVFSKV--EIKPSNEVILGIAGSDA---QAFIDQHFNGTSN 139
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP-------STIF------------ 166
+ H G KI D + + +L I+ + + LP ST++
Sbjct: 140 VRHHDQGSAIKI--DEQRW-QLLISPELAEQLIHALPEKATCCDSTLWDLYDIRAALPRI 196
Query: 167 ---------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPS 216
P + ++GIS KGCY+GQE V+R ++R I ++ I+TG D P +
Sbjct: 197 DSAIELEFIPQALNLQAVDGISFKKGCYVGQETVARAKYRGINKRAMFIVTGHADHAPQA 256
Query: 217 GSPI 220
G I
Sbjct: 257 GDSI 260
>gi|74318116|ref|YP_315856.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus
denitrificans ATCC 25259]
gi|74057611|gb|AAZ98051.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus
denitrificans ATCC 25259]
Length = 354
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 46/264 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G FLQ +T DV LP A+ + +P+G++L FL + D +
Sbjct: 55 LSQLGVIALRGADTAGFLQGQLTNDVRNLPADGAQWNGYCSPKGRLLANFLAWR-NGDDY 113
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-----------------------------IIEIQP 96
L++ ++ +L + LR++V + E +
Sbjct: 114 CLQLSGDILAGVLKRLSMFILRADVKARDASEETVRLVVAGKDAAAAVRAAMGELPEAE- 172
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELRINHGI- 153
+ + L+ Q + F+ SIA W + + A+ + + +R+N GI
Sbjct: 173 MRTIALAAGQVVRVGDDKFV---LSIAPERAAEVWQNLTRSATPVGAPVWDWMRLNAGIP 229
Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
F+P + ++L+ G+S KGCY GQE+V+R Q+ +++R M++
Sbjct: 230 MIVAATQEQFVPQMVN-----LELIGGVSFQKGCYPGQEIVARSQYLGKLKRR-MVLAHA 283
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234
D G + + D++ G VV
Sbjct: 284 DAEAAPGDSLYSADLDGQASGTVV 307
>gi|296135946|ref|YP_003643188.1| folate-binding protein YgfZ [Thiomonas intermedia K12]
gi|295796068|gb|ADG30858.1| folate-binding protein YgfZ [Thiomonas intermedia K12]
Length = 314
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 40/249 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++
Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------IQP 96
+ L +D S + + +L + LR ++ QP
Sbjct: 65 EQIGLLLDASIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLAPPAQP 124
Query: 97 IN-------GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR- 148
++L Q + + ER A L + ++R
Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQAAQAALRAELAVLPALPPSEWALQDIRA 184
Query: 149 -INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ H F+P + +L+ G++ KGCY GQEVV+R Q+R +++R ++
Sbjct: 185 GLPHLTAATQQLFVPQMLN-----FELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVV 239
Query: 208 TGTDDLPPS 216
TG + P
Sbjct: 240 TGPAAMQPG 248
>gi|67515557|ref|XP_657664.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4]
gi|40746082|gb|EAA65238.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4]
Length = 1243
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 51/184 (27%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR +
Sbjct: 1026 DLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHRGV 1085
Query: 200 IRKRPMIITGTDD---------------------LPPSGSPILTDDIEIGT-----LGVV 233
+RKR + + +D LPP+GS I G LG +
Sbjct: 1086 VRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLGGI 1145
Query: 234 VGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASFP 269
G LA+ R++ + D + G L V+VKA P
Sbjct: 1146 -GNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIVP 1204
Query: 270 HWYK 273
W +
Sbjct: 1205 TWTR 1208
>gi|115717980|ref|XP_799220.2| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 251
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 31/228 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEE 62
L+ +S + V G+ A LQ ++T DV L + S L QG++L + + +
Sbjct: 25 LTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWSK 84
Query: 63 D------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
D +++LE D + L L Y++R V +I ++ W+ FS
Sbjct: 85 DPEGDTQSYLLECDSAISQELHKHLKLYRIRKKV--DITSLDSEYHVWS---IFSPGPTP 139
Query: 117 DERFSIADVLLH-----RTWGHNEKI----ASDIKTYHEL--------RINHGIVDPNTD 159
H R G +++ S + E+ R G+ + +
Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I
Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPI 247
>gi|187478257|ref|YP_786281.1| aminomethyl transferase [Bordetella avium 197N]
gi|115422843|emb|CAJ49371.1| putative aminomethyl transferase [Bordetella avium 197N]
Length = 319
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 40/235 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I G A+ FL +T DV L AR + T +G++L LI + ++ +
Sbjct: 25 ISAAGPDALGFLHGQLTQDVNGLAADGARLAGYCTAKGRLLATLLIWRASPESVHALVRA 84
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSFIDERFSIADVL 126
++L+ +L + LR+ + I + ++ +S +H T + + ++ AD L
Sbjct: 85 DLAEALVKRLSMFVLRAKLKISLTDLSVAGVSAGPDHLDALGTAAGGALPSTAWARAD-L 143
Query: 127 LHRTW----GHNEKI-------------------ASDIKTYHELRINHG---IVDPNTD- 159
TW G+N + +D +++ + G I D
Sbjct: 144 SSGTWIAAPGNNLRWWWVAGAGQMQGQALRALLSEADEESWRAADLAAGLPWIAKATQDL 203
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
F+P T+ ++L+ G+S TKGCY GQEVV+R +R +++R + G LP
Sbjct: 204 FIPQTVN-----LELIGGVSFTKGCYPGQEVVARSHYRGTVKRR--MAHGVSALP 251
>gi|72393355|ref|XP_847478.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70803508|gb|AAZ13412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 339
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 56/322 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----LYFLISKIE 61
LS+++ ++V G A FLQ + T D+ L + L G+++ LY E
Sbjct: 7 LSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPE 66
Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------- 103
+ T ++++ D+L++ L Y++R + I VV++
Sbjct: 67 GQVTIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNAGS 126
Query: 104 --------WNQEHTFSNSSFIDERFSIADVLLH-RTWGHNEKIASDI------------- 141
+ + S +D ++A+ R++ + I
Sbjct: 127 SPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSE 186
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R
Sbjct: 187 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 246
Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
KR P+ + G + P ++ + ++G + G L + R++ VD +
Sbjct: 247 KRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 306
Query: 253 K--GMALTVHGVRVKASFPHWY 272
G++L+ G V A P W+
Sbjct: 307 SFPGLSLS-DGTTVDARIPEWW 327
>gi|145628842|ref|ZP_01784642.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145638619|ref|ZP_01794228.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII]
gi|260582268|ref|ZP_05850061.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
gi|144979312|gb|EDJ88998.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145272214|gb|EDK12122.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII]
gi|260094636|gb|EEW78531.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
gi|309750118|gb|ADO80102.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|261867315|ref|YP_003255237.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412647|gb|ACX82018.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 295
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
LS+ + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + +
Sbjct: 17 LSHYTLIEMAGVDAEKYLQGQLTCDVT----KLAAGESTLTAHCDPKGKMSALFRLIRQD 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
E TF + + S +D+L Y + S V P++ ++ I +
Sbjct: 73 EQTFYMLLKSELLPSALDQLKKYAVFSKVTFT--PLDWQIIGAAGAKGIEKYGQISAQIR 130
Query: 122 IA-------DVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170
+A +LL+ T E A + + L I G+ V F+P +
Sbjct: 131 VAVNDRQPRVILLNPTRLSIEPTA-EANVWDLLDIQDGVPGLAVATQLQFIPQAL----N 185
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
L + IS KGCYIGQE V+R ++R ++ I T+ LP GSP+
Sbjct: 186 LQSIEQAISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236
>gi|148827663|ref|YP_001292416.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
gi|148718905|gb|ABR00033.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EKRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|145636266|ref|ZP_01791935.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH]
gi|145270431|gb|EDK10365.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|159481016|ref|XP_001698578.1| hypothetical protein CHLREDRAFT_187731 [Chlamydomonas reinhardtii]
gi|158282318|gb|EDP08071.1| predicted protein [Chlamydomonas reinhardtii]
Length = 816
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 48/213 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59
+L+++ + G A+ FLQ ++T DV L P + + +LTP+GK L IS+
Sbjct: 47 AHLTSRGVLLAEGPQALTFLQGMVTNDVRPLQTAGPAEPPVYATVLTPKGKFLHDLFISR 106
Query: 60 IEE--DTFILEIDRSKRDS---LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
+ D +LE+D + + L++K L + +Q S S+
Sbjct: 107 HPDMPDALLLEVDAAGATAAMQLLNKPLVAAGPAPAAAGLQ---------------SASA 151
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+E + R W R + G+ + + P D +D+
Sbjct: 152 AGEEAY--------RAW----------------RYSLGVAEGEAEIPAGQAAPLDFNVDV 187
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L G+S TKGCY+GQE S +R +IRKR M +
Sbjct: 188 LRGVSYTKGCYVGQERNSFTHYRGVIRKRLMPV 220
>gi|260797663|ref|XP_002593821.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae]
gi|229279051|gb|EEN49832.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae]
Length = 255
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 51 ILLYFLISKIEED-TFILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVVLSWN 105
IL+Y L S + + +LE D + SLI L YK+R V + + + ++ +
Sbjct: 15 ILMYNLQSNPDSPPSLLLECDHTAVPSLIKLLKMYKIRKKVDICSVADEYTVWALLPGTS 74
Query: 106 QEHTF---SNSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTD 159
F + S ID R + G N + + + YH R G+ + D
Sbjct: 75 DPPVFVSDTGLSVIDPRLPDLGNRVVLKSGTNLVFDCVEGTSEDYHTHRYQLGVGEGVND 134
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
P + + LNG+S KGCY+GQE+ +R H +IRKR M +T
Sbjct: 135 LPTGNCTPLECNLAFLNGVSFDKGCYVGQELTARTHHTGVIRKRLMPVTLDRPASLEAGS 194
Query: 220 ILTDD--IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272
LT++ +G G +A+ R+ H+ +K G V +KA P W+
Sbjct: 195 TLTNEKGKNVGKFRHAQGVHGIALVRL---AHSQEKLYCKQDSGEEVGLKAETPKWW 248
>gi|145630355|ref|ZP_01786136.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae
R3021]
gi|144984090|gb|EDJ91527.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae
R3021]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|319760397|ref|YP_004124335.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str.
BVAF]
gi|318039111|gb|ADV33661.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str.
BVAF]
Length = 331
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 55/266 (20%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58
++ + L N IK+ GK +IP+L T D+ L S+ QGK++ +Y
Sbjct: 20 LTLISLKNWILIKLTGKDSIPYLHNQFTCDIKNLNINKYTFSSHCNVQGKMITNMYVFYF 79
Query: 59 KIEEDTFIL-------EIDRSKRDSLIDKL-----------------------LFYKL-- 86
E FI +I+ K+ S+ K+ +F+K
Sbjct: 80 NKYELAFICPTNVYKKQIEILKKYSIFSKVNIIPDYNVTLLGVAGSNAKQYLSIFFKTLP 139
Query: 87 -RSNVIIEIQPINGVVLSWNQEHTF---SNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
+ N I+ Q I+ + +E ++S A L + H++ I+ DI+
Sbjct: 140 NQINTIVHHQGISVLYFHLPKERFLLIVHDNSLFYSLLKEAQFLSAQYNNHSQWISLDIE 199
Query: 143 TYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + P D L S +F P A +DLL GIS KGCY+GQE+++RIQH + +
Sbjct: 200 SGY----------PYIDILTSEMFFPQAANIDLLGGISFNKGCYLGQELIARIQHYKLNK 249
Query: 202 KRPMIITGTDD------LPPSGSPIL 221
+ +TGT D +P SG+ ++
Sbjct: 250 QSLHKLTGTIDTNKHNQIPISGNYLM 275
>gi|145640439|ref|ZP_01796023.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021]
gi|145275025|gb|EDK14887.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.4-21]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|70997319|ref|XP_753409.1| aminomethyl transferase [Aspergillus fumigatus Af293]
gi|74673542|sp|Q4WVK5|CAF17_ASPFU RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|66851045|gb|EAL91371.1| aminomethyl transferase, putative [Aspergillus fumigatus Af293]
gi|159126864|gb|EDP51980.1| aminomethyl transferase, putative [Aspergillus fumigatus A1163]
Length = 447
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 72/311 (23%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLISK 59
L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I
Sbjct: 48 LTNRGLISITGVDSTTFLQGLITQNMLIANDPRRATRRTGTYTAFLNSQGRVLNDAFIYP 107
Query: 60 I-----EEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH 108
+ E DT +++E+D+++ SL+ L +KLRS + + ++ V S ++H
Sbjct: 108 MPKGDSETDTTGDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDH 167
Query: 109 TFSNSSFID----------ERFSIADVLLHRTWGHNEKIAS------------------- 139
+ + S+A + R G ++ +
Sbjct: 168 AEPRWAAYNLESESSSPFAPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGS 227
Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H
Sbjct: 228 QVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHT 287
Query: 198 NIIRKR--PMIITGTD----------------DLPPSGSPILTDDIEIGT-----LGVVV 234
++RKR P+ + LPPSGS I D G LG V
Sbjct: 288 GVVRKRIVPVQLYANSAPQSGDTPVYDPSAAVALPPSGSNISKVDGRKGRSAGKFLG-GV 346
Query: 235 GKKALAIARID 245
G LA+ R++
Sbjct: 347 GNIGLALCRLE 357
>gi|301169187|emb|CBW28784.1| predicted folate-dependent regulatory protein [Haemophilus
influenzae 10810]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|319898015|ref|YP_004136212.1| hypothetical protein HIBPF18630 [Haemophilus influenzae F3031]
gi|317433521|emb|CBY81904.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|229846552|ref|ZP_04466660.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
gi|229810645|gb|EEP46363.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|319775606|ref|YP_004138094.1| hypothetical protein HICON_09480 [Haemophilus influenzae F3047]
gi|329122346|ref|ZP_08250933.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116]
gi|317450197|emb|CBY86413.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327473628|gb|EGF19047.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
E+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 EQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 IEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|254522474|ref|ZP_05134529.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14]
gi|219720065|gb|EED38590.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14]
Length = 291
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 25/272 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + G A+ F A ++DV LP + SA L+ +G+ L F + ++ ED
Sbjct: 15 LPGHPLLSLQGADAVVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLAEDHV 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------------- 110
+L + D++ +L + R V + ++ V ++
Sbjct: 75 LLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAHAAGDGWEL 134
Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF- 166
S++ R AD G A+ + + + +G+ P + ++
Sbjct: 135 DLGSDALPRTLRIGAADAFAA---GSEADEAAFALAWRQADLRYGL--PRLEESQREVWT 189
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D LNG S+ KGCY GQE+V+R H KR + + T +G + D
Sbjct: 190 PQQLGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAMPAQAGDGVQQDGAA 248
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258
+GT+ V G ALA+ ++ D ++ G A+
Sbjct: 249 LGTIASVAGDLALAVLPLEASDADLQVGGAVA 280
>gi|66811634|ref|XP_639996.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4]
gi|74853999|sp|Q54NS1|CAF17_DICDI RecName: Full=Putative transferase caf17 homolog, mitochondrial;
Flags: Precursor
gi|60466925|gb|EAL64969.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4]
Length = 408
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 49/257 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISK 59
V L ++S IKV G A+ LQ + T ++ L + ++I L G++L +IS
Sbjct: 15 VPLKSRSLIKVVGPDALKHLQGLTTNNLNRLKDNQSTNTSIYNGFLQGNGRLLFDSIISL 74
Query: 60 IEE---------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP- 96
E D+FI++ID S + + L YKLR+ + II++
Sbjct: 75 DREHHNGNPKPISMAPGSSDNSGLDSFIVDIDSSILEEAMAHLKQYKLRNKIDIIDVTEN 134
Query: 97 ------INGVVLSWNQEHTFSN------SSFIDERFSIADVLL----HRTWGHNEKIAS- 139
++ + + F+ S +D R I V L ++ E+++
Sbjct: 135 FNVYSILDKTYKTVRDDSLFAQLEKDQCSVMMDPRHQIMGVRLLVPNNKQLVVEERLSKY 194
Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
D Y+ R++ GI ++ I P + DLLNG+ KGCY+GQE+ SR
Sbjct: 195 ESKDETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHF 254
Query: 197 RNIIRKR--PMIITGTD 211
+IRKR P++++ D
Sbjct: 255 TGLIRKRIFPVVMSVKD 271
>gi|88703563|ref|ZP_01101279.1| aminomethyltransferase [Congregibacter litoralis KT71]
gi|88702277|gb|EAQ99380.1| aminomethyltransferase [Congregibacter litoralis KT71]
Length = 337
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 44/273 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +L ++ + + G FLQ +T D L + A A+ +G++L + + +
Sbjct: 23 ACFLPGEAMLHLRGSKVPEFLQGQLTCDTRKLGPERALMGALCNVKGRVLSDLTVLYVSD 82
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
IL + RS ++ L Y S + +E+ +L + + +R
Sbjct: 83 AHLILRLRRSVAATIAKTLERYAQFSRISVELAAEEHSILGLGGRDFAAECAIDGDRSDA 142
Query: 123 AD-------------------VLLHRTWGHNEKIASD------IKTYHELRINHGIVDPN 157
AD +LL R GH E IA D + + + VDP
Sbjct: 143 ADSASNTVSPGSLPVTLRDDALLLQRGPGHGEVIAIDDAPARALASQGTASGSQADVDPV 202
Query: 158 TDFLPSTI--------------FPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T + +T+ F AL DL ++ KGCY GQE+V+R+ ++ +K
Sbjct: 203 TSWEAATLRTGHYALELEDLECFTPQALNYDLSGLVAFDKGCYTGQEIVARLHYKGRSKK 262
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
R I G + L PI D G G +VG
Sbjct: 263 RLQIFEGPETL----GPIARDTSLQGESGEIVG 291
>gi|124267051|ref|YP_001021055.1| hypothetical protein Mpe_A1862 [Methylibium petroleiphilum PM1]
gi|124259826|gb|ABM94820.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 323
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 42/257 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V L + I+ G A FL +T D+ L AR +A +P+G++L F+ K
Sbjct: 14 GAVRLLHSGVIRAAGADAASFLHGQLTNDMTGLGLGEARLAAYCSPKGRMLASFVAFKRS 73
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SW-NQEHTFSN 112
D L + + +L + LR+ + + V++ +W Q +
Sbjct: 74 HDEIWLACRSDVLPATLKRLRMFVLRAKAQLSEGGDDAVLVGLAGRSAAAWLAQVLPAAV 133
Query: 113 SSFIDERFSIADVLLHRT----------WGH---------NEKIASDIKTYHELRINHGI 153
+ + R ++ D LL R W N A ++ + L ++ G+
Sbjct: 134 NGAVWSRHALDDALLVRLPDGAGQARWLWAGPAAQTDAVLNALPALALERWDWLEVHSGV 193
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---- 209
P P +L+ G++ KGCY GQE+V+R Q+R I++R ++ G
Sbjct: 194 A-PIVANTVEAFVPQMLNYELVGGVNFQKGCYPGQEIVARSQYRGTIKRRAALVHGDAAA 252
Query: 210 ---------TDDLPPSG 217
DD PSG
Sbjct: 253 LPGQEVFWSGDDAQPSG 269
>gi|145632732|ref|ZP_01788466.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|145634537|ref|ZP_01790246.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA]
gi|229844374|ref|ZP_04464514.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
gi|144986927|gb|EDJ93479.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|145268082|gb|EDK08077.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA]
gi|229812623|gb|EEP48312.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
Length = 280
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171
E+ SI + L + +EKI + I G+ + P T +F+P + L
Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|226294152|gb|EEH49572.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1192
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D TY+ RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR +
Sbjct: 973 DFATYNLRRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGV 1032
Query: 200 IRKR-----------PMIITGTDD--------LPPSGSPI 220
+RKR PM T T D LPP+G+ I
Sbjct: 1033 VRKRILPVRFYDINDPMPTTDTPDYSSESKLTLPPAGANI 1072
>gi|119478829|ref|XP_001259454.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181]
gi|119407608|gb|EAW17557.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R H +
Sbjct: 158 DLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGV 217
Query: 200 IRKR--PMIITGTDDLPPSGSPI 220
+RKR P+ + LP +P+
Sbjct: 218 VRKRIVPVQLYAKSPLPSGETPV 240
>gi|50550805|ref|XP_502875.1| YALI0D15774p [Yarrowia lipolytica]
gi|74634509|sp|Q6C8Y7|CAF17_YARLI RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49648743|emb|CAG81063.1| YALI0D15774p [Yarrowia lipolytica]
Length = 479
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 58/254 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKIL----LYFLISK 59
++++ + V G+ A L + T V + P+ G A L +G+++ LY +
Sbjct: 45 NSKTMVHVSGRDAAKLLNGLFTLPVSSGAATPFSGVFG-AFLNGKGRVITDAFLYTTSNH 103
Query: 60 IEED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------F 110
EED +F++E D++ D L+ L +++R+ V +E + WN++ T
Sbjct: 104 TEEDQSFVIEFDKAVEDELLLHLKRHRIRAKVKMEKLTDYECIFIWNRDATPDYWRRENE 163
Query: 111 SNSSF------------------------------------IDERFSIADVLL-----HR 129
+S F +D+R+ + + +
Sbjct: 164 CDSGFFQSLCEVAWSVAEVGETSEVEEKNGEPAQKPLYGLLVDDRYPLLGIRMILPAKTS 223
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
T + ++++ Y+ LR G + + + P+ P ++ +D +NG+ +GCY+GQE
Sbjct: 224 TTYFSAIPSANLTQYNMLRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYVGQE 283
Query: 190 VVSRIQHRNIIRKR 203
+ R H ++RKR
Sbjct: 284 LTIRTHHTGVVRKR 297
>gi|224826501|ref|ZP_03699602.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002]
gi|224601102|gb|EEG07284.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002]
Length = 325
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S I+V G+ A FLQ +++D+ + ++ S+ +G++L FLI + D F+L +
Sbjct: 32 SIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRVLGNFLIWQFRGDYFLL-V 90
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEI--QP--INGVVLSWN-------------QEH-TFS 111
+L +L + LRS V +E+ +P + GV Q H +
Sbjct: 91 SADIATALCRRLSMFVLRSEVKLEVLAEPWLLAGVKGGGAEAVLKDVFTEVPAQPHDVIA 150
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGI---VDPNTD 159
N S R ++LL + I S ++ + L I G+ P +
Sbjct: 151 NESGAIIRLPAGNLLLSYDASASGSIKSRLEQACRQVGVEAWSLLDIAAGVPWVTRPTQE 210
Query: 160 -FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
F+P I MD+L GIS KGCY GQE+V+R Q+ +++R + +LP S
Sbjct: 211 QFVPQMIN-----MDVLGGISFKKGCYPGQEIVARTQYLGKVKRRLFRV----ELPVKAS 261
Query: 219 P 219
P
Sbjct: 262 P 262
>gi|73541126|ref|YP_295646.1| glycine cleavage T protein (aminomethyl transferase) [Ralstonia
eutropha JMP134]
gi|72118539|gb|AAZ60802.1| Glycine cleavage T protein (aminomethyl transferase) [Ralstonia
eutropha JMP134]
Length = 373
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 120/308 (38%), Gaps = 53/308 (17%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+I+V G A FL +T V L AR + +P+G++ FL+ + + D +L++
Sbjct: 66 GWIRVAGDDAAAFLHTQLTNAVEDLGPGAARLAGYCSPKGRLQASFLMWR-DADGIVLQL 124
Query: 70 DRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQ--------------EHTFSNSS 114
+ +L +L + LR+ + ++ P+ VV + + F +S
Sbjct: 125 SDDIQPALQKRLSMFVLRAKAKLSDMSPVVAVVGAAGPQAAQALAKAGLPAPDAVFGTAS 184
Query: 115 FIDER-FSIADVLLHRTWG---------------HNEKIASDIKTYHELRINHGI----V 154
+ D W E +D + L + GI
Sbjct: 185 VESATVIRLPDAAGQPRWQAVLPAERAGEFRAALSGELADADSAFWDWLDVQSGIPRIVT 244
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
F+P I +L+ G++ KGCY GQE+V+R Q+R +++R ++ G +P
Sbjct: 245 ATQEQFVPQMIN-----FELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGDGAVP 299
Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI----KKGMALTVHGV 262
+ I + G+VV G LA +ID A+ +G ALTV +
Sbjct: 300 APATEIFRPEDPQQPCGMVVNAAPAPQGGWAGLAELKIDAAASALHLGSAEGAALTVGEL 359
Query: 263 RVKASFPH 270
+ P
Sbjct: 360 PYEVPLPE 367
>gi|94310768|ref|YP_583978.1| glycine cleavage T protein (aminomethyl transferase) [Cupriavidus
metallidurans CH34]
gi|93354620|gb|ABF08709.1| putative glycine cleavage T protein (aminomethyl transferase)
[Cupriavidus metallidurans CH34]
Length = 336
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 53/292 (18%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
I+V G A FL + +T V L AR + +P+G+++ FL+ + + D +L++
Sbjct: 29 GLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWR-DADGIVLQL 87
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSWNQEHTF 110
+ + +L + LR+ + +Q G+ T
Sbjct: 88 SADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQ-QAGLPTPQAPLATA 146
Query: 111 SNSSFIDERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELRINHGI--- 153
S+ + R + AD L ++ G +AS + L + GI
Sbjct: 147 SDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVASP-AFWDWLDVASGIPRI 205
Query: 154 -VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
F+P I +L+ G++ KGCY GQEVV+R Q+R +++R + GT D
Sbjct: 206 AAATQEQFVPQMIN-----FELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGD 260
Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256
+P + + I + G++V G + LA +ID + A+ G A
Sbjct: 261 VPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAA 312
>gi|148825254|ref|YP_001290007.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE]
gi|148715414|gb|ABQ97624.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE]
Length = 280
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171
E+ SI + L + +EKI + I G+ + P T +F+P + L
Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|226480062|emb|CAX73327.1| hypotherical protein [Schistosoma japonicum]
Length = 396
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 37/241 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +S I V G SA FLQ + T D+ ++ + S ++ I +S + D +
Sbjct: 26 LKERSLICVRGTSADEFLQGLTTNDIKSINHP---NSFMVLTDAFIYHTNRLSANQSD-Y 81
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-------------------------PINGV 100
++E+D + L+ L Y LR V I+ P++
Sbjct: 82 LIEVDANYVPDLVKHLNRYNLRGKVKIDANVPIHLWIAMPKSKQSNKLSDYKAWSPVDSF 141
Query: 101 VLSWNQEHTFSNS------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
LS ++ F S + S D ++ + + DI YH R G+
Sbjct: 142 ALSDQRQLIFFASDPRGISGWSGRILSTPDASVNDIFPSCDTHPLDISLYHTARWELGLP 201
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212
+ +F+ + P +A DL G+S +KGCYIGQE+ +R +IR+R P+ I T +
Sbjct: 202 EGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGVIRRRYVPIKILSTGN 261
Query: 213 L 213
+
Sbjct: 262 I 262
>gi|309972377|gb|ADO95578.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 280
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G A +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + F L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDAL 171
E+ SI + L + +EKI + I G+ + P T +F+P + L
Sbjct: 121 EQRSILLNESELPVNFNGDEKI------WEVADIQAGLPNLSPQTQNEFIPQAL----NL 170
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 171 QAIEQAISFTKGCYIGQETVARAKYRG-TNKRAMFI 205
>gi|253996915|ref|YP_003048979.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
gi|253983594|gb|ACT48452.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
Length = 335
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 40/232 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ +++ G A FLQ +T DV L + A +A TP+G++L FL + + +
Sbjct: 35 LSHLGLLQLSGADAFTFLQGQVTNDVNQLKGETAHYTAYCTPKGRMLALFL-AFAQHERI 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV--------IIEIQ---PINGVVLSWN----QEH-- 108
L++ + +L Y +RS V II+I P +LS +H
Sbjct: 94 HLQMPLELVAATAKRLKMYVMRSKVEVQDTSHDIIKIGLSGPNANALLSTQFAEIPQHDY 153
Query: 109 ---TFSNSSFID------ERFSIADVLLHRT--WGHNEKIAS--DIKTYHELRINHGIVD 155
T N S + RF I + H W AS + + L I G+ D
Sbjct: 154 ELVTLDNGSLLKLPGSTHARFEIFTDINHAPAIWSALSAQASVANADYWEWLEIQAGVPD 213
Query: 156 --PNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P T +F+P + +DLL+GI+ KGCY GQE+V+R + I++R
Sbjct: 214 VKPETQEEFVPQMLN-----LDLLSGINFKKGCYTGQEIVARTHYLGSIKRR 260
>gi|254283511|ref|ZP_04958479.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B]
gi|219679714|gb|EED36063.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B]
Length = 289
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S YL ++ +++ G A+ FLQ +AD + +G++L FL K+
Sbjct: 10 LSLAYLDQEAVLELTGPDAVSFLQGQSSADFSGSDTQKPILGTFCNVKGRVLADFLAFKV 69
Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---------KLRSNVIIEIQPINGVVLSWNQEHTFS 111
++ +L + D+LI L Y + V I +G ++ ++E +
Sbjct: 70 SDERILLRCEGQVGDALITHLQPYLNFSKSTLRRCEGVVYGGIGDQDGSNVTSSEEARDA 129
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT---YHELRINHGIVDPNTDFLPSTI--- 165
F RFS A H G + A+ + Y E+ N + +TI
Sbjct: 130 GEWFAIPRFSGATEFWH--LGDHPAAATTVSADMWYSEMMRNE-----DARITGATIGKY 182
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTD 223
P D DL IS +KGCY GQE+++R+ ++ ++R T D P I+ D
Sbjct: 183 LPQDLNYDLRGYISFSKGCYTGQEIIARLHYKGKPKRRLYRATCTAESDCAPGSDLIVGD 242
>gi|213405489|ref|XP_002173516.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275]
gi|212001563|gb|EEB07223.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275]
Length = 334
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+ +++ + + G + FLQ + V+ K SA L + L+ + + + D
Sbjct: 27 FFADRRLVFIEGIDTVKFLQGLAANKVVAGEPKY---SAFLNAKRTQLVDNV--QGQGDA 81
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV-LSWNQ-EHTFSNSSFIDERFS 121
F +EID ++ + + L ++LR+ V + + P V +WN S+ +D R
Sbjct: 82 FAIEIDATRAAAFLQHLQRFQLRAKVRLAPVDPSRWCVQATWNDTREDSSDDGLVDTREH 141
Query: 122 IADVLLHRTWGHNEKIASDIK-----------------TYHELRINHGIVDPNTDFLPST 164
+ L + W ++++ Y RI G+ + + +
Sbjct: 142 LITSPLTQLWDPRFPETNNVRRAIVPPTSAPAQELSMEAYKAFRIQKGVAEGQREIISGE 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
FP ++ D L+G+ KGCY+GQE+ R R RKR
Sbjct: 202 AFPLESNFDKLHGVHFQKGCYLGQELTYRSYQRGTTRKR 240
>gi|146162532|ref|XP_001009664.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila]
gi|146146307|gb|EAR89419.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila
SB210]
Length = 381
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 61/249 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLI----- 57
L N+ I + GK A LQ I T D+ K A + L PQG+I+ LI
Sbjct: 30 LQNRKIISLSGKDAKSILQGIQTNDMNLFSQQSNKAALYTQFLNPQGRIIFDALIIRPQV 89
Query: 58 -----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLS------- 103
K +ED + ++++ + I + Y LR V + +N V +
Sbjct: 90 VIQGELKTKEDEYWIDLESKQGADFIKHIKKYCLRKRVSLADFTNKVNVVTVYSDLIMQQ 149
Query: 104 -------WN----------QEHTFSNSSFIDERFS---------IADVL-LHRTWGHNEK 136
WN Q+ ++ + D R S D L L +T E+
Sbjct: 150 KEQEGDYWNHLDASIYEKTQDEIYTQVCYTDPRCSNLGMRCIVPSQDQLQLDKTI---EE 206
Query: 137 IASDIKTYHELRINHGIVDPN--TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ DI Y R+ GI + D LP T+ +D LNG+S TKGCY+GQE+ +R
Sbjct: 207 KSQDI--YDAQRLVLGIAQGSEVADRLPFTVN-----LDFLNGVSFTKGCYVGQELTART 259
Query: 195 QHRNIIRKR 203
H I+R+R
Sbjct: 260 YHTGIVRRR 268
>gi|121996857|ref|YP_001001644.1| glycine cleavage T protein (aminomethyl transferase)
[Halorhodospira halophila SL1]
gi|121588262|gb|ABM60842.1| glycine cleavage T protein (aminomethyl transferase)
[Halorhodospira halophila SL1]
Length = 318
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEEDTF 65
+ + + V G A FLQ I+TAD+ K + + + TP+G++L L LI +D +
Sbjct: 26 AGYAVVAVTGDEAQDFLQRILTADIPPPAAKHSVLAGLCTPKGRLLALARLIPW--DDGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------IQPINGVVLSWNQEHTFSNSS 114
L + + + +L Y LRS V + P VL+ H
Sbjct: 84 RLVLPDDVAGATVSRLQMYVLRSRVTVAPPTPDWRLVRAAGPGARAVLAERCGHPLPE-- 141
Query: 115 FIDERFS-IADVLLHRTWGHNEKI---------------------ASDIKTYHELRINHG 152
+D S AD+ + R G E+ ++D + + I G
Sbjct: 142 -VDGGVSHSADMAIVRMPGTPERYCAVGPASPVQALEHALAEYLPSADTAAWRAIEIRAG 200
Query: 153 ---IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I P + F+P + +D L G+S +KGC+ GQEVV+R +R +++R
Sbjct: 201 QPEIRAPGRELFIPQMVN-----LDRLGGVSFSKGCFPGQEVVARTHYRGKVKQRMFRAA 255
Query: 209 GTDDLPPSGSPI 220
GT P G I
Sbjct: 256 GTGPAPADGCEI 267
>gi|194220206|ref|XP_001918326.1| PREDICTED: similar to CG8043 CG8043-PA [Equus caballus]
Length = 203
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-- 216
D P P ++ + +NG+S TKGCY+GQE+ +R H +IRKR + + LP S
Sbjct: 81 DLPPGVALPLESNLAFMNGVSFTKGCYVGQELTARTHHMGVIRKRLFPVQFSGPLPASGI 140
Query: 217 --GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ +LT+ + G G LA+ +++K+ + A + V + AS P W+
Sbjct: 141 APGTSVLTESGQAAGKYRAGQGDVGLALLQLEKIRGPLHIRTAESGR-VALTASVPDWW 198
>gi|82702860|ref|YP_412426.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
gi|82410925|gb|ABB75034.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
Length = 348
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 40/264 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I G+ A FLQ ++ D+ A + P+G+IL FLI + D +
Sbjct: 43 LSHFGLIHFWGEDAETFLQGQLSCDIRRATTSTASYGSYCNPKGRILATFLIWRTTGDGY 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-----------------------IQPINGVVL 102
++++ + +L Y LR+ V + + I V L
Sbjct: 103 LMQLPAILLAGIQKRLAMYVLRAKVKLADSSGAWVHIGVAGPHAAALLRKILGEIPVVPL 162
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDI--KTYHELRINHGIVDPN 157
S ++RF + +L + W + A+ + + L I GI
Sbjct: 163 GVRHGERGSIIRLAEDRFQLL-ILPEQAPTIWEDLSRNATQVGKPCWDWLEIRAGI---- 217
Query: 158 TDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTD 211
LP+T P +D L GIS KGCY GQE+V+R Q+ I++R +
Sbjct: 218 PHILPATQEQFVPQMVNLDTLGGISFQKGCYPGQEIVARTQYLGKIKRRMYLANVRPAAG 277
Query: 212 DLP-PSGSPILTDDIEIGTLGVVV 234
DLP +G + + D+ + G+VV
Sbjct: 278 DLPIEAGDELFSADLGEQSAGMVV 301
>gi|71753323|ref|XP_826136.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62359621|gb|AAX80054.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 316
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R + R
Sbjct: 164 KLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTR 223
Query: 202 KR--PMIITGT-------DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
KR P+ + G + P ++ + ++G + G L + R++ VD +
Sbjct: 224 KRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTR 283
Query: 253 K--GMALTVHGVRVKASFPHWY 272
G++L+ G V A P W+
Sbjct: 284 SFPGLSLS-DGTTVDARIPEWW 304
>gi|296284234|ref|ZP_06862232.1| aminomethyltransferase [Citromicrobium bathyomarinum JL354]
Length = 247
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 1 MSSVYLSNQSFIKV----CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56
M++ L N++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + +
Sbjct: 1 MTATRLQNRAVIRLSPTAAGEDVAGFLQGLLTNDVTG---ELPAYAALLSAQGKTMFDMI 57
Query: 57 I----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ + T +L+ + D L+ +L Y+LR IEI + + W+ E ++
Sbjct: 58 VWPGRAGEHGATILLDCEADMADDLVKRLSLYRLRRK--IEIARDESLAVHWSVEAIDAH 115
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
D R L HR + + R++ G+ + + +A+
Sbjct: 116 PP--DPRLP---ALGHRWLAPADDSEPADAAWLAHRLSLGVPEGRAELGDILWLETNAVE 170
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L+G+S +KGCYIGQE +R+ R + +R +++
Sbjct: 171 --LHGVSFSKGCYIGQENTARMNWRQKVNRRLVVV 203
>gi|33519725|ref|NP_878557.1| putative aminomethyltransferase [Candidatus Blochmannia floridanus]
gi|81666840|sp|Q7VRF7|YGFZ_BLOFL RecName: Full=tRNA-modifying protein ygfZ
gi|33504070|emb|CAD83331.1| aminomethyltransferase; glycine cleavage T-protein [Candidatus
Blochmannia floridanus]
Length = 336
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHE---LRINHGIVDPNTDFLPSTIF-PHDALMDLLN 176
+I D LL++T + +YH+ L I G P DF S +F P A MD+L
Sbjct: 171 TILDFLLNKT----QSFPIYYNSYHQWTALDIEAGY--PYIDFATSELFFPQAANMDILQ 224
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------DDLPPSGSPIL 221
GIS KGCYIGQE+V+RIQH + ++ +T + LP SG I+
Sbjct: 225 GISFNKGCYIGQELVARIQHYKLNKQSLYQLTSNTYHNQHNQLPVSGDHIV 275
>gi|34496817|ref|NP_901032.1| hypothetical protein CV_1362 [Chromobacterium violaceum ATCC 12472]
gi|34102672|gb|AAQ59037.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 38/299 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N + I+V G+ A FLQ ++ D+ + + A+ S T +G++L FLI + + +
Sbjct: 43 LDNFALIRVEGEDAAAFLQGQLSNDIREVTTERAQYSTYSTAKGRMLASFLIW-LRDGAY 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFIDE- 118
L + +++ +L + LRS V + + ++G+ + F ++ +E
Sbjct: 102 YLMVSADIAETVAKRLTMFVLRSKVKVVLDREWSLLGVSGIAIEQALHKHFPGAAGAEEM 161
Query: 119 --RFSIADVLLHRTWG-------HNEKIASDIKTYHELR-----------INHGIVDPNT 158
F +LL G I D+ L I GI T
Sbjct: 162 RVAFQSEGILLALPSGGYLLAERDGGGIGKDLAQMEGLEAALPEAWAWKDIQAGIA-WVT 220
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG- 217
P A M+L+ ++ KGCY GQE+V+R Q+ +++R ++ LP
Sbjct: 221 QATQEQFVPQMANMELIGAVNFKKGCYPGQEIVARSQYLGKMKRRMFKVSFDAALPVGAK 280
Query: 218 --SPILTDDIEIGTLG--VVVGKKA---LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
SP L D IG L VG+ A LA+A+ + I T+ R++ +P
Sbjct: 281 LYSPQLPDQ-SIGMLASECRVGENAYLGLAVAQSQTWEAGIFADEGHTIALRRLELPYP 338
>gi|152978102|ref|YP_001343731.1| aminomethyltransferase [Actinobacillus succinogenes 130Z]
gi|150839825|gb|ABR73796.1| aminomethyltransferase [Actinobacillus succinogenes 130Z]
Length = 273
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + I+V G A +LQ +TADV L + +A P+GK+ F + ++ E
Sbjct: 5 IELSQYTLIRVEGDDAESYLQGQLTADVTALAAGDSTFTAHCDPKGKMSAVFRLIRLSEK 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVV--LSWNQEHTFSNSS-FID 117
F I + +D+L Y + S V E +P+ G++ + F+N + I+
Sbjct: 65 RFYALIRTCLLPAALDQLKKYAVFSKVAFTQEEAEPV-GIIGETELPVQAKFNNRAILIN 123
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+ ++A W +DI+ + + +F+P + L +
Sbjct: 124 PQSAVAFNADSALWD-----LADIQQGYPILTEQS----QFEFIPQAL----NLQAIEQA 170
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPI 220
+S KGCYIGQE V+R ++R KR M + TD +P G I
Sbjct: 171 VSFHKGCYIGQETVARAKYRG-ANKRAMYVFKAATDSIPECGGEI 214
>gi|298368398|ref|ZP_06979716.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282401|gb|EFI23888.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
Length = 300
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ ++V G+ F+ ++ D+ L A + TP+G++L L+ D +L +
Sbjct: 23 AIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRVLANMLVLNRGSD-LLLVM 81
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-HTFSNSSF---IDERFSIA 123
++++ +L + LR+ V+ E P VL N E H + S E +
Sbjct: 82 AADLTEAIVKRLRMFVLRAKVVFEPLPDYAAAAVLDENTEAHAAAEPSLSFPAAEENGVW 141
Query: 124 DVLLHRTW----GHNEKI------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
V L T G E++ A + HE+R + + T A+
Sbjct: 142 TVSLPHTGRLKIGEAERLPEHDAAAENAWNLHEIRSGYAWISAATK--------ETAVAQ 193
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+LN G+ KGCY GQE+++R Q+R +++ +++G L +G +L + E G
Sbjct: 194 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-GSLEAAGIAVLENGAEAG 252
Query: 229 TL 230
+
Sbjct: 253 QI 254
>gi|237746054|ref|ZP_04576534.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
gi|229377405|gb|EEO27496.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
Length = 337
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 52/283 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + + G A+ F+ ++ D+L L AR +A TPQG++L F + K E
Sbjct: 20 AVLLKQTGLLALEGDDAVSFIHGQLSNDILYLDAASARLAAYCTPQGRMLALFHVWKAEG 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE----IQPINGV-------VLS-WNQEHTF 110
+++ + R +L +L Y LR+ V + Q I GV VLS W T
Sbjct: 80 RIWLM-LPRDILPALQKRLQMYVLRAKVKLADESGKQAILGVGGRRAGAVLSRWF--STL 136
Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRI 149
+ F + + F LL +++ S D ++ I
Sbjct: 137 PSEPFGKVENGMGVLVRVGDAFGAPRYLLTVPLARLQEVESALSAELAMCDENSWALGDI 196
Query: 150 NHGIVD---PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ P D F+P + ++ G+S KGCY GQEV++R Q+R +R+R
Sbjct: 197 EAGVPQITLPVQDRFIPQMVN-----LEQTGGLSFKKGCYPGQEVIARSQYRGTVRRR-- 249
Query: 206 IITGTDDLPPSGSPILTDDIEIG-----TLGVVVGKKALAIAR 243
+ +LP SP + ++ G G V G +A R
Sbjct: 250 MFHAYMELPEGKSPAIDLNMASGADLFDAAGEVCGTLVMAARR 292
>gi|190573775|ref|YP_001971620.1| putative aminomethyl transferase [Stenotrophomonas maltophilia
K279a]
gi|190011697|emb|CAQ45316.1| putative aminomethyl transferase [Stenotrophomonas maltophilia
K279a]
Length = 291
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 19/269 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + G A F A ++DV LP + SA L+ +G+ L F + ++ +D
Sbjct: 15 LPGHQLLSLQGPDAAVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLADDHL 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF 120
+L + D++ +L + R V + ++ ++ S ++
Sbjct: 75 MLVLADGDADAIASQLQRFVFRRKVKVLVRDDLAAAGAFTAPEAASGAAIAQAAGDGWEL 134
Query: 121 SIADVLLHRTW--GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIF-PHD 169
+ L RT G + A+ +T + + + +G+ P + ++ P
Sbjct: 135 DLGSDALPRTLRIGAADAFAAGSETDEAAFALAWRQADLRYGL--PRLEEGQREVWTPQQ 192
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+D LNG S+ KGCY GQE+V+R H KR + + T +G + D +GT
Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVART-HFLGKAKRAVQLLHTAAPAQAGDGVQQDGAALGT 251
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALT 258
+ V G ALA+ ++ D ++ G A+
Sbjct: 252 IACVAGDLALAVLPLEAGDADLQVGDAIA 280
>gi|264677744|ref|YP_003277650.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni CNB-2]
gi|262208256|gb|ACY32354.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni CNB-2]
Length = 318
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 23/254 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ ++ D
Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRLSADEI 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSF--IDER 119
+L DRS + +L + LR+ + + G+ ++ N++ + ++
Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALKQQ 134
Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165
+ L+ G+ + + D+ + E + G+ + + + +
Sbjct: 135 GDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+
Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251
Query: 226 EIGTLGVVVGKKAL 239
E T VV A+
Sbjct: 252 EQATGTVVQAAAAV 265
>gi|294878109|ref|XP_002768268.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870504|gb|EER00986.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 39 ARGSAILTPQGKILLYFLI----------------SKIEEDTFILEIDRSKRDSLIDKLL 82
A + L+P+G++L L+ E++ ++++D D+++ L
Sbjct: 5 AAAAVFLSPKGRVLFDCLMYSGVSLKPDTSKGIVSDDKGEESLVVDVDEGVLDNVM--RL 62
Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-----IDERFSIADVLLHRTWGHNEKI 137
F + R ++ + I+ ++ + + W + + + E + D+ L ++
Sbjct: 63 FIRHRVHLPLNIEKLDNLGVYWTPSKSQNGCDGDTEVPVYEDPRVKDLGLRAILPKSDID 122
Query: 138 ASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
A + Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R
Sbjct: 123 AESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASK 182
Query: 197 RNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHA 250
+ +RKR M I G D+ SG+ I+ D +IG + + + L IA+I HA
Sbjct: 183 KLAVRKRLFGMRIDGDVDV-ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA 237
Query: 251 IKKGMALTVHGVRVKAS 267
KGM + V+A+
Sbjct: 238 -PKGMQMNTKQAMVEAT 253
>gi|114777736|ref|ZP_01452696.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus
ferrooxydans PV-1]
gi|114551952|gb|EAU54486.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus
ferrooxydans PV-1]
Length = 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 35/253 (13%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N S +K G + +LQ IT D+ L A +A+LTPQGK + I + D IL
Sbjct: 27 NWSVLKASGPTVRDYLQGQITQDMNRLSADCAIHTALLTPQGKAVTELYIIEGNNDELIL 86
Query: 68 EIDRSKRDSLIDKL----LFYKLRSNVI--IEIQPINGVVLSWNQEHTFS---------N 112
S + + +L L +LR V+ + I + G + +Q +F+
Sbjct: 87 LTPASYATATVARLRQFALGQELRIGVVEALAICSLQGT-HAHSQLESFALPEPDEMWLA 145
Query: 113 SSFIDERFSIADVLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTD 159
+S E A V+ H G+ + + + + +RI G D +
Sbjct: 146 TSRNPETDCFAIVMPHHPRGYWVVTAATSIRAVVSRQPEVEQNAFEAMRIIRGFPDFGIE 205
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSG 217
+ + I P +A + +G+S KGCY+GQEV SR+ R I+K+ + + G D P
Sbjct: 206 W-DAAIHPLNANLVEFDGVSFEKGCYVGQEVTSRMHWRGGIKKKLYRVSVDGRPDTLP-- 262
Query: 218 SPILTDDIEIGTL 230
PI T + IG L
Sbjct: 263 CPIRT-SVNIGEL 274
>gi|288575997|ref|ZP_05977979.2| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
gi|288566522|gb|EFC88082.1| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 27/240 (11%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S I+V G+ FL ++ D+ LP A + TP+G++L ++ ED +L +
Sbjct: 9 SVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRVLANMIVLNRGED-LLLVM 67
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFIDE--- 118
+S++ +L + LR+ V P VV ++ S + +D
Sbjct: 68 AADLAESIVKRLRMFVLRAKVEFTPLPDFAVVGMLDESCHATPPDSPNLSFEALLDNGVY 127
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R I +V + + A + HE+R + + T T
Sbjct: 128 TIPLPHKGRLKIGEVAQLPEY---DAQAENAWNLHEIRSGYPWISAATK---ETAVAQML 181
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ G+ KGCY GQE+++R Q+R +++ +++G D L +G ++++D E G +
Sbjct: 182 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGVGVVSEDAEAGQI 240
>gi|194289602|ref|YP_002005509.1| aminomethyl transferase [Cupriavidus taiwanensis LMG 19424]
gi|193223437|emb|CAQ69442.1| putative aminomethyl transferase [Cupriavidus taiwanensis LMG
19424]
Length = 341
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 118/290 (40%), Gaps = 49/290 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++V G A FL +T V L AR + +P+G++L FL+ + + D +L++
Sbjct: 31 GLVRVAGDDAASFLHTQLTNAVDDLAPGTARLAGYCSPKGRLLATFLMWR-DADGIVLQL 89
Query: 70 DRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV----LSWNQEHTFSNSSFIDERFSIA- 123
+ ++ +L + LR+ + +I P + ++ +Q + + F++A
Sbjct: 90 SAEIQAAVQKRLSMFVLRAKAKLSDITPAHAILGVAGAGASQALGAAGLPAPEAPFAVAG 149
Query: 124 ----------DVLLHRTWG------HNEKIASDIKT---------YHELRINHG----IV 154
D W + + + + + L + G +
Sbjct: 150 ADGVTVIRLPDSAGQPRWQLVLPAERADAVRAALSATLTGAAPALWDWLEVQSGLPRIVA 209
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
F+P I +L+ G++ KGCY GQEVV+R Q+R +++R ++ G ++P
Sbjct: 210 ATQEQFVPQMIN-----FELVGGVNFRKGCYPGQEVVARSQYRGTLKRRMWLVQGEGEVP 264
Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256
+ I + G++V G LA +ID A++ G A
Sbjct: 265 APAAEIYRPEDPGQPCGMIVNAAPAPDGGWAGLAELKIDAAGSALRLGSA 314
>gi|30249485|ref|NP_841555.1| glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
gi|30138848|emb|CAD85425.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
Length = 348
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+ G+ A FLQ ++ DV ++ A TP+G++L FL+ + ++++
Sbjct: 43 LSHFGLIRFSGEDAQNFLQGQLSCDVRSVDSTQASHGGYCTPKGRLLGSFLLWQDSDNSY 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE----------------------------IQPI 97
++++ + +++ +L + LR+ V I+ I P
Sbjct: 103 LMQLPAERVETITRRLKMFVLRAKVSIQDNTDDLIRIGIAGKNALLSLQNMLPDTTISPA 162
Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT--WGHNEKIA--SDIKTYHELRINHGI 153
V S +S + RF I + W K A + + L I GI
Sbjct: 163 PLAVTSIPDGQIICHS---ENRFEIMTTSIQAPSLWEQLNKQAHCAGAAIWDWLEIREGI 219
Query: 154 V----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I +D++ G+S KGCY GQE+V+R ++ +++R
Sbjct: 220 PAIFNATQEQFIPQMIN-----LDIIGGVSFKKGCYPGQEIVARTEYLGKVKRR 268
>gi|145509709|ref|XP_001440793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408021|emb|CAK73396.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N+S + + G+ LQ I T D+ + ++ + L G+++L L+ + D
Sbjct: 11 LDNRSIVSIKGREVCEILQGITTNDLRQIQQ--SQSTLFLNTNGRVILIVLLWQYCNDEI 68
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII----------------------EIQPINGVVLS 103
++ID+ + SLI+ + + +R V I E + I
Sbjct: 69 WMDIDKEIKSSLINHIKKFLIRKKVQITDYEDQLHVFQVYGPQVKLSNKEGEAITDPNND 128
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ E + N +D R S + + N+ D+ + R+ I +
Sbjct: 129 LSDEGDYRNLVAVDPRSSSIGIRMVTNEMPDLKENDIQVQDLAHFEISRLTEAIFEGKE- 187
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSG 217
P D N I+LTKGCY+GQE+ +R H +IRKR P + ++
Sbjct: 188 --VVNKIPFQVNFDFWNSINLTKGCYVGQELTARTYHTGVIRKRLLPFKVVSNNNTTNLE 245
Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
I+ + + E+G VV IA ++ +D ++K
Sbjct: 246 DQIINNGEQEVGK--VVKSSNNFGIANVNYLDIDLEK 280
>gi|257453607|ref|ZP_05618897.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60]
gi|257449065|gb|EEV24018.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60]
Length = 242
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A FLQ +T +V L + + +AI +G++ L I KI +D + + I +
Sbjct: 9 ITGADAQKFLQGQVTCNVTKLSDQF-QATAISNLKGRVALGIWIKKIADDAYQIVISQDC 67
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133
D + Y S + + P + + N +FS S E + DV
Sbjct: 68 ADEFAKHIKKYAAFSKLTLSA-PRDIFAVIDNGVSSFSES----ENGTDTDV-------- 114
Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
D K + + I N+ IV P + + G+ KGCY+GQE+
Sbjct: 115 ------DRKAWQKASIATGNYWIVKTTAGLWQ----PQELRLHQQGGVDYDKGCYLGQEI 164
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
++R+ + + + GT D+P +G I + D+ + ++ G +AL +AR D +
Sbjct: 165 IARLYFKASPKAWLHRVAGTGDIPNAGEKIGSVDV-VNSIATDTGFEALVVARPDDI 220
>gi|114561743|ref|YP_749256.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
frigidimarina NCIMB 400]
gi|114333036|gb|ABI70418.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
frigidimarina NCIMB 400]
Length = 320
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I++ G+ F+ +T D+ +L + A P+GK+L F I + F
Sbjct: 24 LTHMGLIEITGEQGRSFIHGQVTTDITSLGTNEWKWGAHCDPKGKMLASFRTFSIGDSLF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTFSNSSFID---- 117
+L + +S + +L Y + S E+ ++ + ++ +Q F+ +F D
Sbjct: 84 ML-LPKSTLSLDLPQLQKYAVFSKA--ELADVSNNYQIIGIAGSQAQAFATENFGDVSQA 140
Query: 118 -------------ERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
ERF I + + + D + L I G PN D
Sbjct: 141 INLVEQGVIIRDGERFIAIINNAAAETIISQSGQTLIDASAWQALEIKAGY--PNIDAAH 198
Query: 163 STIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
S + + +NGIS TKGCY+GQE ++R+++R ++ II+GT
Sbjct: 199 SGQYVAQMCNLQAINGISFTKGCYMGQETIARMKYRGGNKRALYIISGT 247
>gi|85059975|ref|YP_455677.1| putative global regulator [Sodalis glossinidius str. 'morsitans']
gi|118577998|sp|Q2NRF3|YGFZ_SODGM RecName: Full=tRNA-modifying protein ygfZ
gi|84780495|dbj|BAE75272.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 328
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L + + + + G + +LQ +T DV +L +A +GK+ + + +
Sbjct: 23 ISLEDWALVTLNGADTVKYLQGQLTCDVASLDADRFSFAAHCDAKGKMFSHLCVFHHHDG 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PING 99
+E RS RDS + +L Y + S I P
Sbjct: 83 MAFIE-RRSVRDSQLAELKKYAVFSKTTITADDDAVLLGVAGFQAQAALGGLFTSVPNAA 141
Query: 100 VVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
++ +Q+ T S RF ++ D L H+ G + +D + + L I G
Sbjct: 142 HPVAHHQDTTLLYFSLPAPRFLLITTPAVRDALQHKLEGQAQ--LNDSQQWLALDIEAGY 199
Query: 154 VDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P D T F P A + L+GIS KGCY GQE+V+R ++R ++ + G
Sbjct: 200 --PVIDSANGTQFIPQAANVQALDGISFNKGCYAGQEMVARAKYRGANKRALYWLAGKAS 257
Query: 213 LPPSGSPILTDDIEI 227
PP+ DD+E+
Sbjct: 258 HPPAAG----DDLEL 268
>gi|269467784|gb|EEZ79542.1| aminomethyltransferase [uncultured SUP05 cluster bacterium]
Length = 265
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+S +K+ G FLQ + D+ L + +A QGKI+ + K +D F
Sbjct: 5 LTNRSLLKLSGGDTQSFLQGQFSNDIDALEGGAVQLNAYCQHQGKIIALLWVIK-RDDDF 63
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + +L +K+ S+V I N V+ + F + ++++ S+A V
Sbjct: 64 YLSFPSDLAELVTKRLTMFKMMSDVTI-TDVSNEVIQLGVIDEEFDGAFKLNDQQSVALV 122
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLN----- 176
H E SD + + I +G+ ++ + F+P LLN
Sbjct: 123 DKH------EFDLSDESNWEKACIENGMAEVYLNTSEQFVPQ----------LLNLDINE 166
Query: 177 -GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV- 234
G+S TKGCY GQEVV+R+ + ++R + T D+ ++ G+VV
Sbjct: 167 VGVSFTKGCYPGQEVVARLHYLGKSKRRMRVFTCDADVNIGDELVVAGSKSAKASGIVVR 226
Query: 235 ----GKKALAIARID 245
K+L +A ++
Sbjct: 227 CVKLDSKSLCLATVE 241
>gi|251793343|ref|YP_003008071.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus
NJ8700]
gi|247534738|gb|ACS97984.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus
NJ8700]
Length = 295
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
L + + I++ G A +LQ +T DV K+A G + LT P+GK+ F + + +
Sbjct: 17 LEHYTLIEIAGTDAEKYLQGQLTCDV----TKLAGGESTLTAHCDPKGKMSALFRLIRQD 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT--FSNSSFID 117
E TF + + + S +D+L Y + S V + I G + E FS +D
Sbjct: 73 EQTFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRVD 132
Query: 118 ERFSIAD-VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALM 172
+ +LLH T E + + + L I G+ +F+P + L
Sbjct: 133 VKTQQPRIILLHPTRLALEPTV-EAEAWDLLDIQDGVPSLAAATQLEFIPQAL----NLQ 187
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
+ IS KGCYIGQE V+R ++R ++ I T LP GS +
Sbjct: 188 SIERAISFQKGCYIGQETVARAKYRGANKRALFIFAARTQSLPDIGSAL 236
>gi|326794158|ref|YP_004311978.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1]
gi|326544922|gb|ADZ90142.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1]
Length = 305
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ FI V GK A FLQ +TADV + + A TP+G+++ FLI ++ ++ +
Sbjct: 19 LTELGFIHVEGKDAQKFLQGQVTADVSKVTSGASSFGATCTPKGRVISNFLICQVADEQY 78
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQ-EHTFSNSSFIDERFS- 121
+L + SL++K L + + V + + + ++++ + N + ++
Sbjct: 79 LLTL----HSSLVEKTLAHFKKYAVFFKATLTDASDTYAAFSEYARSLDNDETPQDEYAL 134
Query: 122 ------IADVL---LHRTW----------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
I DVL L+ T+ H + A+ + H + I+ + P +
Sbjct: 135 LHPTQKIGDVLSIQLNNTYFSETLSIVPAEHLQDKATTNEEAHRV-ISLLTLRPFIELKD 193
Query: 163 S-TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
S I P M IS TKGCY GQE+V+R+++R +K +++ +L
Sbjct: 194 SEEILPQWFNMQRNGSISFTKGCYTGQEIVARMKYRGKSKKHMALLSSESELTTGMDVAN 253
Query: 222 TDDIEIGTL 230
+ IGTL
Sbjct: 254 QEGKVIGTL 262
>gi|254481212|ref|ZP_05094457.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148]
gi|214038375|gb|EEB79037.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 35/276 (12%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + FLQ +T D + + A A PQG+++ F+++++ E+ + L + +
Sbjct: 5 GPDTLSFLQGQVTCDTREVSSQQAVVGAYCNPQGRMVCDFMLAQLGENHYALRLKANTLA 64
Query: 76 SLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHT--FSNSSFI--DERFSIAD------ 124
+ Y + S +E + + V+ W E +N+ F + ++ A
Sbjct: 65 TAAKTFSKYIVFSKADLEAERQDWQVIGCWGNEAAKDLANAGFAIPEAKYQAATGDGYVV 124
Query: 125 ----------VLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTIF 166
LL T H+E++ S + L+I GI + +
Sbjct: 125 VQMDDAGTQFELLIDTQNHSERLNSLGQNLNSGKESQWQALQIRAGIGRIEQANIEE-LL 183
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224
P D+ +S TKGCY GQE+V+R+ +R ++R + + D+ P +G+ + +
Sbjct: 184 PQMLNYDVTGHVSFTKGCYTGQEIVARLHYRGKAKRR-LYLGQFDETESPGAGAALFSTS 242
Query: 225 IE--IGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258
E +G L I + + +++G+ LT
Sbjct: 243 AEQSVGVLVNAASADGGNICLLCATEKGVEQGLRLT 278
>gi|319427571|gb|ADV55645.1| folate-binding protein YgfZ [Shewanella putrefaciens 200]
Length = 318
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L + + + + +L Y + S + +L E F+ + F D+
Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137
Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163
T N I D +T + L H + D PN +
Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAEHTVFDATAWQALEIAAGYPNLAASHA 197
Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|90021900|ref|YP_527727.1| TonB-dependent receptor [Saccharophagus degradans 2-40]
gi|89951500|gb|ABD81515.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharophagus degradans 2-40]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
I+V G A FLQ T D ++ A +G+++ F +K+ + F L
Sbjct: 32 LIEVKGPDAEKFLQGQCTCDFKSIANGKFSLGAHCNVKGRMVSSFTAAKLGPEHFGLRTH 91
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEHTFSN-------SSFIDERF 120
+S + + L Y + S V +EI V +N E F N S+ +++
Sbjct: 92 KSNAEKALATLKKYAVFSKVSLEISSSLAAVAVFNTQANEVPFFNATAEVGCSTALEQGA 151
Query: 121 SIADV-LLHRTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDAL 171
+A + W E I ++ + I G+ + D I P +
Sbjct: 152 CLAHTNSMQELWLARENIQQLLEQLPVAAPHYWTAYNIAQGVAEVTADSTEQLI-PQEIN 210
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRK---RPMIITGTDDLPPSGSPILTDD 224
+ LL G+S KGCY GQE+V+R+ ++ ++K R + T P +G+ ++ ++
Sbjct: 211 LQLLGGVSFNKGCYTGQEIVARMHYKATLKKHMYRAQLAPST-SAPATGTALINEE 265
>gi|120597634|ref|YP_962208.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
gi|120557727|gb|ABM23654.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
Length = 318
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L + + + + +L Y + S + +L E F+ + F D+
Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137
Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163
T N I D +T + L H + D PN +
Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQVLEIAAGYPNLAASHA 197
Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|146294227|ref|YP_001184651.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
gi|145565917|gb|ABP76852.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
Length = 318
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 29/231 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQEALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L + + + + +L Y + S + +L E F+ + F D+
Sbjct: 84 ML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQA---CQFVKQHF--GDI 137
Query: 126 LLHRTWGHNEKIASDI---------KTYHELRINHGIVD-------------PNTDFLPS 163
T N I D +T + L H + D PN +
Sbjct: 138 QQELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQALEIAAGYPNLAASHA 197
Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 198 HQYVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|302793815|ref|XP_002978672.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii]
gi|300153481|gb|EFJ20119.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii]
Length = 404
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 132/355 (37%), Gaps = 94/355 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----------PYKIARG-------SAILTP 47
L +++ + G FLQ + T DVL L P G + IL P
Sbjct: 48 LKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGILNP 107
Query: 48 QGKILL-YFLISKIEED-----------------TFILEIDRSKRDSLIDKLLFYKLRSN 89
QG+ L FL ++E + ++D + D LI L Y LRS
Sbjct: 108 QGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYILRSK 167
Query: 90 VIIE--------IQPINGVV------------LSWNQEHTFSNSS-----------FIDE 118
V IE Q G + + W S ++ F D
Sbjct: 168 VNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGKGWRWFKDP 227
Query: 119 RFSIADVLLHR---TWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R D L R + G + D + Y R+ G+ + + P +
Sbjct: 228 RL---DALGFRGVFSSGITPPLVEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM----IITGTDDLPPS---GSPILTD 223
M LN IS KGCY+GQE+++R +R IRKR M ++ +++ G+ I+
Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIMDG 344
Query: 224 DI--EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV----HGVRVKASFPHWY 272
+ ++G++ +G + LA+ R+ + A K + L G VK P W+
Sbjct: 345 ETGKKVGSVVTALGSRGLAMVRL---EAAAKDRLKLQSVDGGGGAFVKPIRPKWW 396
>gi|302879423|ref|YP_003847987.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2]
gi|302582212|gb|ADL56223.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2]
Length = 311
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + ++V G A FLQ +++ D+ + A+ S+ T +G++L FLI + + D +
Sbjct: 17 LSQLATLRVSGSDAHSFLQNLLSNDIREVSATQAQYSSFNTAKGRMLANFLIWR-DADDY 75
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV------------------------IIEIQPINGVV 101
+L++ + D+L KL Y LR+ V +E+ P+ GV+
Sbjct: 76 LLQLPETLADALRKKLGMYVLRAQVKITDARHEVVSLGLSGCHPALPATCLEL-PVMGVI 134
Query: 102 LSWNQEHTFSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
S E D RF + +L ++ SD + +R ++ P
Sbjct: 135 ES--AELACRIIKIGDARFMLNCTPEQQPMLSAAL-DSQMTGSDTWDWLNIRAGTPVILP 191
Query: 157 NT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
T F+P + DL+ GI+ KGCY GQE+V+R+ + ++R
Sbjct: 192 ATQEQFVPQMVN-----FDLIGGINFKKGCYPGQEIVARMHYLGKPKRR 235
>gi|302805709|ref|XP_002984605.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii]
gi|300147587|gb|EFJ14250.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii]
Length = 404
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 133/358 (37%), Gaps = 98/358 (27%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-----------PYKIARG-------SAILT 46
+L +++ + G FLQ + T DVL L P G + IL
Sbjct: 47 HLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGILN 106
Query: 47 PQGKILL-YFLISKIEED-----------------TFILEIDRSKRDSLIDKLLFYKLRS 88
PQG+ L FL ++E + ++D + D LI L Y LRS
Sbjct: 107 PQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYILRS 166
Query: 89 NVIIE--------IQPINGVV------------LSWNQEHTFSNSS-----------FID 117
V IE Q G + + W S ++ F D
Sbjct: 167 KVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGNGWRWFKD 226
Query: 118 ERFSIADVLLHR---TWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
R D L R + G + D + Y R+ G+ + + P +
Sbjct: 227 PRL---DALGFRGVFSSGITPPLIEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLE 283
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM----IITGTDDLPPS---GSPILT 222
M LN IS KGCY+GQE+++R +R IRKR M ++ +++ G+ I+
Sbjct: 284 YNMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIVD 343
Query: 223 DDI--EIGTLGVVVGKKALAIARIDKVD------HAIKKGMALTVHGVRVKASFPHWY 272
+ ++G++ +G + LA+ R++ ++ G +V +R P W+
Sbjct: 344 GETGKKVGSVITALGSRGLAMVRLEAAAKDRLKLQSVDGGCGASVKPIR-----PKWW 396
>gi|71032799|ref|XP_766041.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352998|gb|EAN33758.1| hypothetical protein TP01_0521 [Theileria parva]
Length = 348
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+ I++ G+ + FLQ +I++D+ + R + L+ QG I+ LI E D +
Sbjct: 4 LNNRVIIRLFGQDSFNFLQGLISSDLRLVKADETRPALFLSAQGHIVAESLIFTHEGDYY 63
Query: 66 I--LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------HTFSNSSF 115
+ L+I+ +K ++I+K KL S V + V + + E T N +
Sbjct: 64 LDSLKINHNKILNIINK---RKLASKVQTDTTESEVYVSTLDSEFYTHFKPGKTKENKNL 120
Query: 116 IDERFSIADVLLHRTW------------------GHN--EKIASDIKTYHELRI-NHGIV 154
I + + HR + G+N +K ++ Y +L + N+ ++
Sbjct: 121 IKLLDTRNRLFGHRYYWISNNTVCGLDQVESNKLGNNNLDKNQENLSVYDKLLLMNNYLM 180
Query: 155 D--PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D N D F + P D + N IS KGCY+GQE+++RI ++ +I K + I +D
Sbjct: 181 DLMMNEDGFEKYKLMPFDLNLQNFNYISSDKGCYVGQEIINRINNKVLINKYKLYIAVSD 240
Query: 212 DLP 214
DL
Sbjct: 241 DLK 243
>gi|255954107|ref|XP_002567806.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589517|emb|CAP95663.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 438
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 46/244 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGS----AILTPQGKILLYFLI-- 57
L+N+ I + G + FLQ +IT ++L P + R + A L QG++L I
Sbjct: 42 LTNRGLISITGIDSTTFLQGLITQNMLVANDPNRSIRRTGAYTAFLNSQGRVLNDAFIYP 101
Query: 58 -----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEH-- 108
++ E +++EID+++ L+ L +KLR+ + + + + SW
Sbjct: 102 LPGAEAQGAESGWLVEIDKNQVPVLLKHLKKHKLRAKLKLRALEEGERTIWSSWKNHAEP 161
Query: 109 ----TFSNSSFIDERFS----IADVLLHRTWGHNEKI---ASD----------------- 140
+S S FS IA + R G +I SD
Sbjct: 162 QRWAAYSLESESPSPFSPTSEIAGCIDTRAPGFGSRIITPGSDGLRTYFPDEAQVAGPEV 221
Query: 141 -IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ +Y RI HG+ + + + + P MD+ GI KGCY+GQE+ R HR +
Sbjct: 222 PLDSYTVRRILHGVAEGQAEVISGSALPLQCNMDMARGIDFRKGCYVGQELTIRTHHRGV 281
Query: 200 IRKR 203
RKR
Sbjct: 282 TRKR 285
>gi|114320486|ref|YP_742169.1| glycine cleavage T protein (aminomethyl transferase)
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226880|gb|ABI56679.1| glycine cleavage T protein (aminomethyl transferase)
[Alkalilimnicola ehrlichii MLHE-1]
Length = 328
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I V G A FL + +T D+ +P R + P+G++L F + + + +F
Sbjct: 27 LPEAGVIAVEGPDATTFLHSQLTHDIEGMPEGSWRLAGWCNPKGRLLALFRVVRDGDQSF 86
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------NSSFIDER 119
L ++ +L + LR+ V ++ + ++L E N++ +
Sbjct: 87 RLLCPGELVTGVMRRLQMFILRARVTLDDRSGEQLLLGLYGEEALDAATRELNTTLPEPS 146
Query: 120 FSI-------------------ADVLLHRTW-GHNEKIASDIKTYHELRINHG---IVDP 156
+ + R W + D + + L+I G I
Sbjct: 147 GTTHTHGATLLALAADRALLIAGPDRMKRLWLALHHLPVGDPQHWRLLQIRAGEPEIFQD 206
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ D P A +D+++G+S KGCY GQEVV+R+ + ++KR I+GT LPP
Sbjct: 207 SQDLF----IPQMANLDVIDGLSFRKGCYPGQEVVARMHYLGRLKKRMFPISGT-GLPPR 261
Query: 217 GSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMAL 257
+ D + LG VV G+ + A + +DHA + G AL
Sbjct: 262 PGTEVRDPADK-RLGQVVVAESDGEDSFAGLAVLPLDHA-EYGAAL 305
>gi|302331392|gb|ADL21586.1| Glycine cleavage T protein [Corynebacterium pseudotuberculosis
1002]
Length = 362
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 56/270 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-----LTPQGKIL--LYFLIS 58
LS++ IKV G A FL +++ + +P ++A + L QG+IL + L +
Sbjct: 48 LSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDILAA 107
Query: 59 KIEEDTFILEIDRSKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSN 112
+ ED L + R++ + + + +++F+ ++++P + VL+ H
Sbjct: 108 QDAEDALYLHLPRAQYETFFAFLTRMIFWSQ-----VKVEPADLAVLTLMGAGVPHFPLP 162
Query: 113 SS-----------FIDERFSIADVLLHRTWGHNEKIASDIK------------TYHELRI 149
SS F R D+L+HR+ N A D+ T +R
Sbjct: 163 SSDAVVAAAQVPGFTTHRL---DILVHRSEIMN--TAKDLTLAGAIPTGLMAFTAERVRS 217
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIIT 208
+V + D PH+A + N + L KGCY GQE V+R++ N+ R R ++I
Sbjct: 218 QQPVVSLDLDH---KSIPHEAPQLIANAVHLNKGCYRGQETVARVE--NLGRPPRALVIA 272
Query: 209 GTDDLPPS----GSPILTDDIEIGTLGVVV 234
D P+ G PI++ +G LG VV
Sbjct: 273 LLDGSAPTTPKPGDPIVSGGRSVGKLGTVV 302
>gi|255019683|ref|ZP_05291762.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Acidithiobacillus caldus ATCC 51756]
gi|254970906|gb|EET28389.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Acidithiobacillus caldus ATCC 51756]
Length = 321
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 53/290 (18%)
Query: 6 LSNQSFIKVC-GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS + I C G A FLQ + D+ +LP + S+ T +G+++ F + + ++D
Sbjct: 10 LSEELGILHCHGADAEKFLQGQFSNDLTSLPSPGGQWSSYSTAKGRMIANFYLLR-DDDG 68
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHT-------------- 109
F L + R +++ ++L ++L + V IE +L+ W T
Sbjct: 69 FWLLLSRDLTETVAERLRKFRLMAKVDIEDAGTTHALLALWGAGATEVLGNPGGEDVPAT 128
Query: 110 ----------------FSNSSFI-----DERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ SF+ D+ S + L R G +E +D + +R
Sbjct: 129 PHAVSVRNGARIVRLPWPEPSFLILASGDDIASWGEQL--RARGAHEATGADWR-LGSIR 185
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
++ T + P + +++L GIS TKGCY GQE+V+R + ++ + +
Sbjct: 186 AGIAFINAATT---EQVIPQELNLEVLGGISFTKGCYPGQEIVARSHYLGRLKNQCYRLR 242
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK--------KALAIARIDKVDHA 250
L P G I + + ++G+V+ +ALA+ R + +H+
Sbjct: 243 AHAPLAP-GRAIFSAAMGEQSIGLVIQAAAVGDGSFEALAVVRAEDAEHS 291
>gi|315635020|ref|ZP_07890301.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393]
gi|315476282|gb|EFU67033.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393]
Length = 304
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
L++ S I++ G A +LQ +T DV K+A G + LT P+GK+ F + + +
Sbjct: 26 LTHYSLIEIVGTDAEKYLQGQLTCDVT----KLAVGESTLTAHCDPKGKMSALFRLIRQD 81
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDER 119
E TF + + + S +D+L Y + S V + I G + E S+ I R
Sbjct: 82 EQTFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQI--R 139
Query: 120 FSIAD-----VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDA 170
I +LL+ T+ E + + + L I G+ +F+P +
Sbjct: 140 IDINGQQPRVILLNPTYLALEPTV-EAEAWDLLDIQDGVPGLAAATQLEFIPQAL----N 194
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
L + IS KGCYIGQE V+R ++R ++ I T LP GS +
Sbjct: 195 LQSVEQAISFHKGCYIGQETVARAKYRGANKRALFIFAARTQSLPEIGSAL 245
>gi|254569948|ref|XP_002492084.1| Mitochondrial matrix protein [Pichia pastoris GS115]
gi|238031881|emb|CAY69804.1| Mitochondrial matrix protein [Pichia pastoris GS115]
gi|328351426|emb|CCA37825.1| Putative transferase CAF17, mitochondrial [Pichia pastoris CBS
7435]
Length = 476
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+AS+ Y RI +GIV+P + ++ P + +D NGIS KGCY+GQE+ +R
Sbjct: 274 MASNSSEYKLRRIINGIVEPADLDMEHSVLPFELNVDFTNGISFEKGCYVGQELTTRTYT 333
Query: 197 RNIIRKRPMII 207
IIRKR M I
Sbjct: 334 TGIIRKRIMPI 344
>gi|300859136|ref|YP_003784119.1| hypothetical protein cpfrc_01719 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686590|gb|ADK29512.1| hypothetical protein cpfrc_01719 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206830|gb|ADL11172.1| tRNA-modifying protein ygfZ [Corynebacterium pseudotuberculosis
C231]
gi|308277082|gb|ADO26981.1| Glycine cleavage system T protein [Corynebacterium
pseudotuberculosis I19]
Length = 376
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 56/270 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-----LTPQGKIL--LYFLIS 58
LS++ IKV G A FL +++ + +P ++A + L QG+IL + L +
Sbjct: 62 LSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDILAA 121
Query: 59 KIEEDTFILEIDRSKRD---SLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSN 112
+ ED L + R++ + + + +++F+ ++++P + VL+ H
Sbjct: 122 QDAEDALYLHLPRAQYETFFAFLTRMIFWSQ-----VKVEPADLAVLTLMGAGVPHFPLP 176
Query: 113 SS-----------FIDERFSIADVLLHRTWGHNEKIASDIK------------TYHELRI 149
SS F R D+L+HR+ N A D+ T +R
Sbjct: 177 SSDAVVAAAQVPGFTTHRL---DILVHRSEIMN--TAKDLTLAGAIPTGLMAFTAERVRS 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIIT 208
+V + D PH+A + N + L KGCY GQE V+R++ N+ R R ++I
Sbjct: 232 QQPVVSLDLDH---KSIPHEAPQLIANAVHLNKGCYRGQETVARVE--NLGRPPRALVIA 286
Query: 209 GTDDLPPS----GSPILTDDIEIGTLGVVV 234
D P+ G PI++ +G LG VV
Sbjct: 287 LLDGSAPTTPKPGDPIVSGGRSVGKLGTVV 316
>gi|328773851|gb|EGF83888.1| hypothetical protein BATDEDRAFT_36379 [Batrachochytrium
dendrobatidis JAM81]
Length = 366
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 132/331 (39%), Gaps = 66/331 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIEED- 63
L N+ +++ G A FLQ ++T + ++P + +A L QG++L+ I + ++
Sbjct: 32 LKNRMVLRLEGSDAAIFLQGLVTNHITDSMPENSLKLAAFLNAQGRVLMDAFIYREPKNP 91
Query: 64 -----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+F++E + L L YKLR V +I I+ V W + +
Sbjct: 92 ESTGPSFLVECADTVIPLLEKHLQRYKLRKQV--KITNISDSVDVWQIWGSLDRDQLKNS 149
Query: 119 RFSI-------ADVLLH-------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ AD+ + +T ++ Y RI GI + TDF
Sbjct: 150 DGGMWCADPRNADMGMRGIALKTCQTLLPDQMKKVPFTDYVARRICLGIPEGPTDFFYEK 209
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGT-DDLPPSGS--- 218
P ++ ++L+ G+ KGCY+GQE+ R H RKR P+ + D +P S S
Sbjct: 210 SLPLESNLELIQGVDFQKGCYLGQELTIRTYHTGFTRKRIVPVQLYNEHDPVPKSLSLDT 269
Query: 219 ------PILTDDIEIGTLGV----------VVGKKA-------LAIARIDKVDHAIKKGM 255
P DI++G L VVGK LA+ R++ V ++
Sbjct: 270 SITMEHPPSQSDIKLGDLTSEETTLTRSKGVVGKYCGGLHNIGLALVRLESVVRPLENQS 329
Query: 256 ALT--------------VHGVRVKASFPHWY 272
L +G+R +A P W+
Sbjct: 330 MLGSSDLSSNEIKPLILANGMRARAFAPLWW 360
>gi|303257418|ref|ZP_07343431.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Burkholderiales bacterium 1_1_47]
gi|331000631|ref|ZP_08324286.1| glycine cleavage T-protein barrel domain protein [Parasutterella
excrementihominis YIT 11859]
gi|302859775|gb|EFL82853.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Burkholderiales bacterium 1_1_47]
gi|329570903|gb|EGG52611.1| glycine cleavage T-protein barrel domain protein [Parasutterella
excrementihominis YIT 11859]
Length = 304
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
F+ V G+ A FLQ ++T +V T+ AR +A QG+ LI +I + F + +
Sbjct: 19 FVVVRGEDAENFLQGMLTQNVKTMGPTDARWTAACNHQGRTAATSLIVRIP-NGFGMLMP 77
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQP-------------INGVVLSWNQE--HTFSNSSF 115
+S +D+L + LRS V IEI P I+ + +E + S
Sbjct: 78 KSIAQDEVDRLSKFILRSKVEIEILPEPITYFCSDDAKAIDRPCPALPREPMQAYVGDSV 137
Query: 116 IDERFSIADVL-LHRTWGHNEKIASD----IKTYHELRINHGIVDPNTDFL--PSTI--F 166
I R D +H + KI D IK ++ R+ +++ + P +
Sbjct: 138 IVVRLPSNDAQGMHGKFVAIGKIPDDMYAPIKAHN--RLARSLMEEGIALIEKPEVLEWL 195
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P MDL+ GI+ KGCY GQE++S+ ++ +++R
Sbjct: 196 PQALNMDLIGGIAFNKGCYTGQEIISKTENLGKVKRR 232
>gi|299529313|ref|ZP_07042752.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni S44]
gi|298722691|gb|EFI63609.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni S44]
Length = 318
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 23/254 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D
Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSADEI 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSF--IDER 119
+L DRS + +L + LR+ + + G+ ++ N++ + ++
Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALKQQ 134
Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165
+ L+ G+ + + D+ + E + G+ + + + +
Sbjct: 135 GDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+
Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251
Query: 226 EIGTLGVVVGKKAL 239
E T VV A+
Sbjct: 252 EQATGTVVQAAAAV 265
>gi|217972050|ref|YP_002356801.1| folate-binding protein YgfZ [Shewanella baltica OS223]
gi|217497185|gb|ACK45378.1| folate-binding protein YgfZ [Shewanella baltica OS223]
Length = 320
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 34/247 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+L + + + + +L Y + S + +L E S F+ E F
Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFVSEHFGDIHQ 139
Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160
AD +L+ +A D + L I G PN
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSG 217
S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L P SG
Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISPESG 257
Query: 218 SPILTDD 224
I +D
Sbjct: 258 LEIAMED 264
>gi|281209059|gb|EFA83234.1| putative mitochondrial transferase [Polysphondylium pallidum PN500]
Length = 396
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 51/262 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKIL---LYFLI 57
L+++S +KV G A+ +Q + T ++ L P + + L+ G++L + F
Sbjct: 17 LTSRSILKVSGPDAVKLVQGLTTNNMGRLVDSQAPSPTSLYTGFLSSTGRLLFDAVVFHQ 76
Query: 58 SKIE-----------------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------- 93
+E E +++D I+ L +YK+R+ IE
Sbjct: 77 QNVEVISSSASRVAKSDGSSGEQQLFIDVDSEVASRAIEHLHYYKIRNKATIENVTEEFA 136
Query: 94 -IQPINGVVLSWNQEHTFSN------SSFIDERF----------SIADVLLHRTWGHNEK 136
++ S + F + + +D R S + + + + +
Sbjct: 137 LFSVLDKTYKSVRNDQLFEHLKQQKCTVMMDPRHDAMGLRILVPSSKNSMKNEVLSNYPE 196
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
D+ Y+ R+ +GI D+ + P + DLLNG+ KGCY+GQE+ SR +
Sbjct: 197 EKEDV--YNLYRVQNGIPQGVKDYSYDKVIPLEYNFDLLNGVDFHKGCYLGQELTSRTHY 254
Query: 197 RNIIRKRPMIITGTDDLPPSGS 218
+IRKR + + D P S
Sbjct: 255 TGLIRKRLFPVVMSSDSPKEHS 276
>gi|319793763|ref|YP_004155403.1| folate-binding protein ygfz [Variovorax paradoxus EPS]
gi|315596226|gb|ADU37292.1| folate-binding protein YgfZ [Variovorax paradoxus EPS]
Length = 308
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + ++
Sbjct: 12 LSHLGVIRAEGPDAASFLHGQLTQDFSLLGATEARLAALCTAKGRVIASFIGIRPQPESI 71
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEHTFS---NSSF 115
+L R + + +L Y LR+ + + + G L+ N + +
Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATDQFALYGLAGTALTANGLDAATPPGKRTA 131
Query: 116 IDERFSI-----ADVLLHRTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
I + S+ AD + W K+ +D+ + E+R GIV T +
Sbjct: 132 IGDDISVVSLYPADGVPRALWIAPAHHAAPAGPKLDADLWQWSEVR--SGIVTVTTPIIE 189
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ + P + + G++ KGCY GQE+V+R Q R +++R
Sbjct: 190 AFV-PQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRR 229
>gi|114331277|ref|YP_747499.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
gi|114308291|gb|ABI59534.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
Length = 356
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 55/255 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI-SKIEEDT 64
LS+ I+ G+ FLQ ++ DV T A TP+G++L FL+ I + +
Sbjct: 43 LSHLGLIRFSGEETQKFLQGQLSCDVHTTDSGKATYGGYCTPKGRLLSSFLLWQNISDYS 102
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFI------ 116
+++++ +++ +L + LR+ VII+ + + ++ HT ++
Sbjct: 103 YLMQLPAELTETIAKRLKMFVLRAKVIIQDHTEDCIRIGVAGKNAHTLLQNTLAGTVLPT 162
Query: 117 -----------------DERFSIADVLLH--RTWGHNEKIASDIKT-----YHELRINHG 152
+ RF I H W E+++S + + L I G
Sbjct: 163 QPLAITAIPDGQVICHSENRFEILISPAHALSLW---ERLSSQARCAGAAAWDWLEIQEG 219
Query: 153 IV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR----- 203
+ F+P I +D + G++ KGCY GQE+V+R Q+ +++R
Sbjct: 220 VPAIFKATQEQFIPQMIN-----LDAIGGVNFKKGCYPGQEIVARTQYLGKVKRRMYRAH 274
Query: 204 -----PMIITGTDDL 213
P+ IT D+L
Sbjct: 275 LDSDSPLEITAGDNL 289
>gi|291295136|ref|YP_003506534.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
gi|290470095|gb|ADD27514.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
Length = 325
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ +H R+ GI D LP + P +A ++ +S KGCY+GQE+++R++ R
Sbjct: 201 QAWHIWRVERGIPD-----LPEALGELPQEAGLE--GRVSYKKGCYLGQEIMARLEARGN 253
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV--DHAIK 252
R + M + G +L PSG+ I + +G +G V G ALA+ R + D
Sbjct: 254 TRYQLMGLLGQKEL-PSGAEIFREGKRVGRVGTAVESPRLGAIALALLRKELAPGDQVHV 312
Query: 253 KGMALTVHGV 262
+G + TV G+
Sbjct: 313 EGWSATVSGL 322
>gi|297538278|ref|YP_003674047.1| folate-binding protein YgfZ [Methylotenera sp. 301]
gi|297257625|gb|ADI29470.1| folate-binding protein YgfZ [Methylotenera sp. 301]
Length = 345
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 56/291 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-LYFLISKIEEDT 64
LS+ +++ G A+ FLQ +T DV L A + +P+G++L L+F S ++
Sbjct: 44 LSHLGLLEISGDDAVTFLQGQVTNDVRLLGDNHAHYTGYCSPKGRLLALFFAFSHNQK-- 101
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSWN 105
LE+++ + + +L Y +RS V I + P V
Sbjct: 102 LHLELNQKLLEPIAKRLKMYVMRSKVTINDVSDSTVRFGLSGNNIAELLAPFFATVPKLP 161
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------IASDIK-----TYHELRINHGI 153
E T + + I A + ++ G+ E+ + D K + L I GI
Sbjct: 162 YESTSTENGTII-CMPNAGMPRYQIVGNTEQAKAIWQALKKDCKPVGKACWEWLEIQTGI 220
Query: 154 VD----PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D +F+P + +D LN I+ KGCY GQE+V+R + +++R +
Sbjct: 221 PDVYLSTQEEFVPQMLN-----LDALNAINYKKGCYTGQEIVARTHYLGKVKRRTQLAHV 275
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ D P + DD VV AI +I + A G + V
Sbjct: 276 SSD----SCPTIGDD--------VVDANQQAIGKIVRCAPATDAGFVILVE 314
>gi|24372450|ref|NP_716492.1| hypothetical protein SO_0861 [Shewanella oneidensis MR-1]
gi|24346433|gb|AAN53937.1|AE015531_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 318
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 27/230 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +TAD+ +L R A P+GK+L F I+ D
Sbjct: 24 LSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTIK-DAL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF--IDERFS 121
+L + + + + +L Y + S + +L + Q + F F + + +
Sbjct: 83 LLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQELT 142
Query: 122 IAD-----------VLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPS--- 163
+ + +L+ + + IA D + L I G PN PS
Sbjct: 143 LTEHGAILKDADRFILVLQPQAASALIAEHTVFDASAWQALEIAAGY--PN--LAPSHAN 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|255067899|ref|ZP_05319754.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
gi|255047887|gb|EET43351.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
Length = 284
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G++L ++ ED +L + +
Sbjct: 11 VRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRVLANMIVLNRGED-LLLIMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---ADVLLH 128
++++ +L + LR+ VI E P+ ++ + T S S + S AD ++
Sbjct: 70 DLIEAIVKRLRMFVLRAKVIFE--PLPDFAVAGELDETASPSPAAEPALSFPAQADNGVY 127
Query: 129 R-TWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
T H+ ++ A + HE+R + + ST+ A+
Sbjct: 128 TITLPHSGRLKIGEAGLLPEYDAAAENAWNLHEIRSGYAWI--------STVTKETAVAQ 179
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+LN G+ KGCY GQE+++R Q+R +++ ++ G D L +G + E G
Sbjct: 180 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLRG-DSLEAAGVTVQNGGEEAG 238
Query: 229 TL 230
+
Sbjct: 239 QI 240
>gi|299747549|ref|XP_001837112.2| mitochondrial protein [Coprinopsis cinerea okayama7#130]
gi|298407569|gb|EAU84729.2| mitochondrial protein [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 70/268 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------SK 59
++N++ I V G A FL I++ V K + SA L QG++L I
Sbjct: 19 ITNRALISVSGSDANTFLNGILSTHV-----KPPQFSAFLHAQGRVLYDVFIYTDPNPQS 73
Query: 60 IEEDTFILEIDRSKRDS-----LIDKLLFYKLRSNVII-------EIQPINGVVL--SWN 105
+ ++++E + L+ L + LRS V + +I G L W
Sbjct: 74 TKGPSYLIEYSPPPASNTDVPPLLTYLKRHVLRSKVKVRDASGNYDIWAAWGSELDRKWE 133
Query: 106 Q--EHTFSNSSFIDERFS--------IADVLLHRTWGHN------------EKIASDIKT 143
Q E T+++S ++ + +VL R G E + DI T
Sbjct: 134 QKREWTWASSGAVEPVWGREAPWGSEPGEVLDCRGIGMGRRLLVKQGDKPKEATSHDIAT 193
Query: 144 YHEL---RINHGIVDPNTDFLPSTIFPHDALMDLLNG------------------ISLTK 182
+ RI HG+ + N D P FP D+ +D++ G + K
Sbjct: 194 SDDYLLHRILHGVPEGNVDIPPMHAFPMDSNLDMMGGGTLLQGPDAEVSELIPTSVDFRK 253
Query: 183 GCYIGQEVVSRIQHRNIIRKR--PMIIT 208
GCY+GQE+ R H+ +IRKR P+I++
Sbjct: 254 GCYVGQELTVRTYHKGVIRKRIHPVILS 281
>gi|256087633|ref|XP_002579970.1| hypothetical protein [Schistosoma mansoni]
gi|238665470|emb|CAZ36209.1| expressed protein [Schistosoma mansoni]
Length = 347
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
DI YH R G+ + +F+ S P +A DL G+S +KGCYIGQE+ +R +
Sbjct: 147 DINLYHNARWELGLPEGIKEFITSDTLPFEANADLSGGVSFSKGCYIGQELTARTHFTGV 206
Query: 200 IRKR 203
IR+R
Sbjct: 207 IRRR 210
>gi|291333965|gb|ADD93642.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C694]
Length = 119
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+LR+++ I + ++ + + + + L+G+ KGCY+GQEV +R++H+ +RK +
Sbjct: 3 KLRVDYVIPEYGSELTEES-YILEMGFERLHGVDFKKGCYVGQEVTARMKHKTELRKGLV 61
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
I ++ +G +L DD IG++ GK ALA R+ D
Sbjct: 62 KILSQHEI-SNGEELLLDDKSIGSILTTYGKSALAYVRLKNRD 103
>gi|90408990|ref|ZP_01217121.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
gi|90309904|gb|EAS38058.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
Length = 324
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 42/244 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
I V G+ I FLQ +T D+ +L +A TPQGK+ F + +E+ L+
Sbjct: 27 IAVQGEDRISFLQGQLTCDINSLKIGEQTLAAQCTPQGKVCSLFHVILLEDRVLFLQPSS 86
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ + +L F K++ + E Q I L + F + E S + +LL
Sbjct: 87 VTEKQLTALQKYAAFSKVKIHKDSEYQAI---TLLGEKSSDFISQELTTENISKSGLLLP 143
Query: 129 RTWGHNEKIA---------------------SDIKTYHE------LRINHG---IVDPNT 158
++++ D TYH+ + I G I + N+
Sbjct: 144 NGMHISKQLTPSLRYLLVLKKEQGSALLKQLEDKATYHDDSLWNAMNIAAGMAFIEEINS 203
Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ F+P + + L+GIS TKGCYIGQE ++R ++R ++ I++G P
Sbjct: 204 EKFIPQMLN-----LQALDGISFTKGCYIGQETIARAKYRGANKRALFILSGHASCAPKA 258
Query: 218 SPIL 221
L
Sbjct: 259 GDTL 262
>gi|71892042|ref|YP_277772.1| putative aminomethyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|118577991|sp|Q493E3|YGFZ_BLOPB RecName: Full=tRNA-modifying protein ygfZ
gi|71796148|gb|AAZ40899.1| putative aminomethyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 330
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 41/262 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58
++ + L + +++ G I L T D+ L +A P+GK++ LY
Sbjct: 20 LTFISLEEWTLVRLHGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNLYVFHL 79
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------------- 104
K +E FI ++ K+ I+++ Y + SNV + I N +++
Sbjct: 80 KNQEMAFIERLNICKKQ--IEEMKKYMVFSNVTV-IPDYNAILIGIAGTNARNHLSMFFS 136
Query: 105 ---NQEHTFSNSSFI--------DERF-------SIADVLLHRTWGHNEKIASDIKTYHE 146
N+ HT ++ + ERF S+ D LL+ + + S +
Sbjct: 137 VLPNKTHTIIHTQDVTLLYLSSPSERFLLIINKKSVLDYLLNESQSQIQFNDSRQWVSLD 196
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ + I++P T L P MD+L+GIS KGCYIGQE ++RI++R ++
Sbjct: 197 MEAGYPIIEPITSEL---FIPQAVNMDILDGISFNKGCYIGQESIARIKYRGYNKQTLYR 253
Query: 207 ITGTDDLPPSGS-PILTDDIEI 227
+ G D + + P D +E+
Sbjct: 254 LNGVMDYKKNYNLPAAGDQVEL 275
>gi|326386667|ref|ZP_08208289.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370]
gi|326208982|gb|EGD59777.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370]
Length = 249
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G+ FLQ ++T DV T P + G +LTPQGK L FL+ + E D +L+ + D
Sbjct: 21 GEDVAAFLQGLVTNDV-TGPLPVWTG--LLTPQGKALFDFLVWR-EGDDLLLDCEAGSAD 76
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
+L +L Y+LR + I + + W Q ++ D R +AD+ L +
Sbjct: 77 ALAKRLSLYRLRRRIAIARD--ESLAVHWLPQGEDAPETASPDPR--LADLGLRWIAPAS 132
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ + + R+ G+ + + + L G+S TKGCY+GQE +R+
Sbjct: 133 SRDEAADAAWQAHRLALGVPEGQAEIGSDATLWLETNATDLAGVSFTKGCYVGQENTARM 192
Query: 195 QHRNIIRKRPMII 207
R + +R +++
Sbjct: 193 NWRQKVNRRLVVV 205
>gi|209695953|ref|YP_002263883.1| hypothetical protein VSAL_I2535 [Aliivibrio salmonicida LFI1238]
gi|226730791|sp|B6EKN9|YGFZ_ALISL RecName: Full=tRNA-modifying protein ygfZ
gi|208009906|emb|CAQ80219.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 318
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +TADV+TLP +GK+ F + D +
Sbjct: 25 LNDWALITMIGNDKKSYLQGQVTADVVTLPQDDITFGGHCDAKGKLWSIFQLFN-HNDGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----INGV-VLSWNQEHTFSNSSF---- 115
L RS ++ + ++ Y + S V I + I+G W +HT ++++
Sbjct: 84 ALFQRRSAIETELTEIKKYSVFSKVDIAVGDDVLLGISGKKATDWVNKHTTTDANVRACE 143
Query: 116 --IDERFSIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTD-FLPST 164
+ S LL T H + I + D + I HG+ P D L +
Sbjct: 144 LGTFAKISETQWLLVTTPEHKKNIINQESNTVLCDESLWSLHTIQHGL--PQLDNALSNA 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
P + + GIS KGCY GQE V+R ++R I ++ +++G ++ +P +G I
Sbjct: 202 HIPQAMNLQAVGGISFAKGCYTGQETVARAKYRGINKRAMYLLSGQSNSIPVAGDAI 258
>gi|85707996|ref|ZP_01039062.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1]
gi|85689530|gb|EAQ29533.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1]
Length = 243
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYF 55
MS L++++ I++ G+ FLQ ++T DV LP +A+L+ QGK + F
Sbjct: 1 MSGKLLNDRAIIRLAATEDGEDVRGFLQGLVTNDVSGELPVY----AALLSAQGKAMFDF 56
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
I + E+ +L+ + D L +L Y+LR + I V W++E + +
Sbjct: 57 FIWEGEDGEILLDCEAEAADDLARRLSLYRLRRKIDIARDETQAVF--WSREKF--DGAK 112
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R S L +R + S Y R++ G+ + + +A+ L
Sbjct: 113 PDPRLSD---LGYRAVAERSETESADAEYLAYRLSQGVPEGRAEIADILWLETNAVE--L 167
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+G+S KGCY+GQE +R+ R + +R +++
Sbjct: 168 HGVSFEKGCYVGQENTARMNWRQKVNRRLVVV 199
>gi|121604847|ref|YP_982176.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
naphthalenivorans CJ2]
gi|120593816|gb|ABM37255.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
naphthalenivorans CJ2]
Length = 317
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L++ I+ G+ A+ FLQ+ +T DV + A +A +G++ F++ K ++
Sbjct: 14 VQLTHLGLIRAAGEDAVKFLQSQLTQDVALMDLTQAHLAAFCNAKGRMQASFILFKRSQE 73
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP----INGVVLSWNQEHTFSNSSFIDER 119
+L R + + +L + +R+ + + GV S E ++ +
Sbjct: 74 EVLLVCSRDILAATLKRLSMFVMRAKAKLSDASDEFSLYGVAGS-AIESMAGSTRPAWTK 132
Query: 120 FSIAD---VLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPS 163
I D V L+ G + D++T++ L + GI +
Sbjct: 133 ADIGDANMVFLYPGAGQLRALWCAPAASPAPQAAGIDLETWNWLEVQSGIAMITQPIFEA 192
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + + G++ KGCY GQE+V+R Q+R +++R ++ D P G +
Sbjct: 193 FV-PQMLNYESVGGVNFKKGCYPGQEIVARSQYRGTLKRRACLVH-ADAAPAVGQEVF 248
>gi|300311915|ref|YP_003776007.1| glycine cleavage system protein T [Herbaspirillum seropedicae SmR1]
gi|300074700|gb|ADJ64099.1| glycine cleavage T (aminomethyltransferase) protein [Herbaspirillum
seropedicae SmR1]
Length = 360
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I V G+ A FL +T DV L AR + +P+G++L FL+ + ++ ++
Sbjct: 55 LTSLGLIAVTGEDAASFLHGQLTNDVQHLDTGSARLAGYCSPKGRLLATFLMWRDDQASW 114
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L++ RS + ++ +L + +R+ + VL T ++ + E F +
Sbjct: 115 -LQLPRSLQPAIQKRLQMFVMRAKAKLADASTERGVLGLAGPAT---ANALAEWFPVLPA 170
Query: 123 ----------------ADVL-------------LHRTW----GHNEKIASDIKTYHELRI 149
AD L W H AS E+R
Sbjct: 171 APYDKIDNSHGTLIRLADAAGSPRYQWIAAIDTLTAAWPRLAQHLTPTASLAWRLSEIRA 230
Query: 150 N-HGIVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
GIV + F+P I +L+ G++ KGCY GQE+V+R Q+ +++R M+
Sbjct: 231 GVPGIVAATQEQFVPQMIN-----FELIGGVNFKKGCYPGQEIVARSQYLGKLKRRTMLA 285
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
T +G + G+VV +AL
Sbjct: 286 TIDSAAARAGQEVFAAADPGQPCGMVVNAEAL 317
>gi|88797936|ref|ZP_01113523.1| hypothetical protein MED297_00830 [Reinekea sp. MED297]
gi|88779133|gb|EAR10321.1| hypothetical protein MED297_00830 [Reinekea sp. MED297]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P + +D L+G+S KGCY GQEVV+R+ ++ +KR +T T D P + +
Sbjct: 178 PQNVSLDALDGVSFKKGCYTGQEVVARLHYKGQSKKRLFRLTFTADQSPDETDVFAGTTR 237
Query: 227 IGTL---GVVVGK-KALAIARIDKVDHAIKKG 254
+G + V G+ ALA+ + DK A+ G
Sbjct: 238 VGEVIQTAVHNGQGAALAVLKTDKTGEAMTLG 269
>gi|307111245|gb|EFN59480.1| hypothetical protein CHLNCDRAFT_138089 [Chlorella variabilis]
Length = 712
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + RI HG+ + +++ + P + +D L GIS TKGCY+GQE+++R + ++R
Sbjct: 159 RDHRRWRILHGVAEGDSEIPTGEVVPLEFNIDGLAGISFTKGCYVGQELMARTHFKGVVR 218
Query: 202 KRPMIITGTDDLPPSGS 218
KR M L P GS
Sbjct: 219 KRLMPFV----LAPPGS 231
>gi|15805387|ref|NP_294081.1| hypothetical protein DR_0358 [Deinococcus radiodurans R1]
gi|6458035|gb|AAF09938.1|AE001896_3 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S ++V G F+ +T D+ P A L +G+I + + +D + L +
Sbjct: 23 SGLRVTGADRTDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRRPDDIY-LHL 81
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE--------IQPINGVVLSWN------QEHTFSNSSF 115
D + L +L Y + V +E + + V W+ Q+ T S
Sbjct: 82 DAGQAPLLAARLRRYIIFDQVELEDVSEVLRTVHVWDQAVPGWDDAGAGAQQWTLGGSLV 141
Query: 116 IDERFSIAD---VLLH----------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
+ R + + V LH G E+ S++ LR+ GI D D L
Sbjct: 142 LGGRVNRSGQPGVDLHYLARDEEAVLAALGGEERPLSELDA---LRVAAGIPDIQRDGLT 198
Query: 163 STIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
T+ P + +D+ L IS KGCY+GQE+++RI+ R R + G + PS +
Sbjct: 199 GTL-PQEVGLDVSGPLPAISYRKGCYVGQEIMARIEARGQTRFHLARVAG--EGLPSHAE 255
Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
I D +G G+ G ALA ++ ++ G A+ V GV +
Sbjct: 256 IRQGDKVVGQSGLSTGPLALA-----RLRRELEDGAAVEVGGVSARVQL 299
>gi|15603739|ref|NP_246813.1| hypothetical protein PM1874 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722304|gb|AAK03958.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 294
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + +++ G+ A +LQ +T DV L + +A +GKI F + + TF
Sbjct: 17 LQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQTF 76
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L + + + +D+L Y + S V P + ++ E + ID + +
Sbjct: 77 YLLVKKGLLPTALDQLKKYAVFSKVTFT--PCDWQIIGLAGEKIINACDEIDAQIRVTLS 134
Query: 124 -----DVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMDL 174
+L+H T + AS + + L I GI + P T +F+P + L L
Sbjct: 135 SQQPRVILIHPTALDLQANASHV-VWDLLDIQDGIPLLSPETQAEFIPQAL----NLQCL 189
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTDDLP 214
+ IS KGCYIGQE+V+R ++R KR M + + ++P
Sbjct: 190 EHAISFQKGCYIGQEIVARAKYRG-ANKRAMFTFVAQSQEMP 230
>gi|297623936|ref|YP_003705370.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093]
gi|297165116|gb|ADI14827.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093]
Length = 348
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS-PILTD 223
+ P +A ++ +S KGCY+GQE+++RI+ R +R+R ++ + +PP G+ +L +
Sbjct: 235 VLPQEAGLEY--AVSYRKGCYLGQEIMARIEARGNVRRR-LVGLRLESVPPEGARELLAE 291
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
+G LG V L + V H + G L V GV
Sbjct: 292 GKVVGRLGTVAEHPQLGTVALASVRHEVGAGAPLLVGGV 330
>gi|84390094|ref|ZP_00991356.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01]
gi|84376748|gb|EAP93623.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01]
Length = 323
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITIIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83
Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104
S IE + ++EI + S ID + S+V+I I Q ++ +
Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKID----IEQTSDVVIGIMGTSANQYVDSIAEGQ 137
Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T S + + D R+++ A+ L+ + EK++ + YHE I+D
Sbjct: 138 GKVRTISGGTAVQVSDNRWALLVTEEAAESLVSSS--SAEKVSEALWQYHE------ILD 189
Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT
Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247
>gi|241760121|ref|ZP_04758219.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
gi|241319575|gb|EER56005.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
Length = 285
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + +
Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEH--TFSNSSFIDE-RFSIADV 125
++++ +L + LR+ V+ E+ P ++G + + H T SF + + + ++
Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLVVSGELADNAEPHPATEPQLSFPAQIQENAVEI 129
Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
L T A + Y HE+R + + T A+ +L
Sbjct: 130 ALPHTGRLKISAAENAAEYQAGAENAWNLHEIRSGYPWICAATK--------EAAVAQML 181
Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G +
Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGVI 240
>gi|227489453|ref|ZP_03919769.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090631|gb|EEI25943.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51867]
Length = 409
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLI 57
+S V SN+ + V G FL +++ IA G+ + L G+I +
Sbjct: 112 LSLVDRSNRVILSVTGDDREAFLTNLLSK-------IIAPGATMALDLDANGRIQHEMDV 164
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
+ E++ F++ + + ++L D L+ S V I I P+ V + EHT +++F
Sbjct: 165 AVTEDEVFLI-VSPHEAETLRDYLVAMIFWSKVEITISPLQLVTVF--GEHTPLDAAFAR 221
Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + AD +L + N ++A + ++ RI G D D
Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQ----NGQLAG-LMSFEAYRIARGEPDHPVDCDEK 276
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD----DLPPSGS 218
TI PH+ + L + L KGCY GQE V+R++ N+ R R +++T D LP +
Sbjct: 277 TI-PHEVGLWLAEAVDLDKGCYRGQETVARVE--NLGRAPRALVVTLLDGSVPQLPAPQT 333
Query: 219 PILTDDIEIGTLGVVV 234
P+ +GTLG VV
Sbjct: 334 PVTLAGRTVGTLGSVV 349
>gi|294891144|ref|XP_002773442.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239878595|gb|EER05258.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 165
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R + +RKR
Sbjct: 12 YRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKR 71
Query: 204 --PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMAL 257
M I G D+ SG+ I+ D +IG + + + L IA+I HA KGM +
Sbjct: 72 LFGMRIDGDVDV-ESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQI----HA-PKGMQM 125
Query: 258 TVHGVRVKAS 267
V+A+
Sbjct: 126 NTKQAMVEAT 135
>gi|90416426|ref|ZP_01224357.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium
HTCC2207]
gi|90331625|gb|EAS46853.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium
HTCC2207]
Length = 253
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S++ S + +I++ G + FLQ +T D+ +L + A TP+G+++ F E
Sbjct: 11 SALAASARGYIRLSGPDSGKFLQGQVTCDMDSLSPSNSIDGAHCTPKGRMVFLFTAHCDE 70
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ + ILE S DS + L Y GV + E T + S+ + +
Sbjct: 71 DGSIILEAHPSIIDSALANLKKY--------------GVF--FKTEITDISDSYSNNQTH 114
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
++D+ R G E +A ++ F+P + +D L I+
Sbjct: 115 LSDLERLRA-GKAEVVAETLEM----------------FIPQMLN-----LDALGYINFK 152
Query: 182 KGCYIGQEVVSRIQHRNIIRKR-PMIITGTDDLPPSGSPI 220
KGCY GQE+++R +R +++R + T+ LP G I
Sbjct: 153 KGCYTGQEIIARAHYRGAVKRRMHHLALTTESLPSPGDEI 192
>gi|196232959|ref|ZP_03131808.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428]
gi|196222937|gb|EDY17458.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428]
Length = 307
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V S ++ + + G + +L +T+DV L + + + T +GK+ +I+ +
Sbjct: 16 GAVDFSERAQLMLTGPDRVRYLNGQVTSDVRKLSPGQTQMACVTTAKGKLCADIVITA-Q 74
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFI---- 116
ED ++ + S R+ L+ +L Y + +V IE +L + E T S + +
Sbjct: 75 EDALYVDAEGSLREGLLARLERYIVADDVAIEDVSEKYALLHYLGAEPTISGAGKVASAR 134
Query: 117 -------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
D R + + R ++A D LRI GI + +T+ P +
Sbjct: 135 RLGRVGWDLRLPREEFVAARESLLAGRVAVDAALAETLRIEAGIPSWGRELDENTL-PPE 193
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQ 195
A +D + I KGCYIGQEV+SR++
Sbjct: 194 AGLDQTH-IDYHKGCYIGQEVISRLR 218
>gi|254362022|ref|ZP_04978151.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica PHL213]
gi|261491670|ref|ZP_05988252.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494211|ref|ZP_05990711.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093573|gb|EDN74547.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica PHL213]
gi|261310114|gb|EEY11317.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312685|gb|EEY13806.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 296
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
V LS I++ G A +LQ +T DV KI+ G LT P+GK+ + +
Sbjct: 17 VPLSQYCLIEIAGVDAEKYLQGQLTCDVA----KISVGEHTLTSHCDPKGKMSALLRLYR 72
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGVVLSWNQEHTFSNSSFID 117
E + F+ I RS + +L Y + S V E+ P+ G+ E F+ +
Sbjct: 73 AENEKFMAIIHRSLLPEALTQLKKYAVFSKVTFTELDTPLYGMA----GEAAFAK---LS 125
Query: 118 ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHD 169
E + + + WG + +D + + + I GI + N + +P
Sbjct: 126 ENMTALRLTTGQPRAIVWGEELETTADEQLWTLMDIQDGIPVLLQQNQFELIPQAT---- 181
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
L L + IS TKGCYIGQE V+R ++R ++ + G + LP S I
Sbjct: 182 NLQALESAISFTKGCYIGQETVARAKYRGANKRALFTLAGNFESEISLPEVASAI 236
>gi|239815836|ref|YP_002944746.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
gi|239802413|gb|ACS19480.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
Length = 308
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + +
Sbjct: 12 LSDLGVIRAEGPDAASFLHGQLTQDFALLGATEARLAALCTAKGRVIASFVGIRPQPELV 71
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII----EIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+L R + + +L Y LR+ + E + G+ + + ++ +R +
Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATEQFALYGLAGTALAANGLDATALPGQRTA 131
Query: 122 I-----------ADVLLHRTW----GHNEKI--ASDIKTYHELRINHGIVDPNTDFLPST 164
I AD + W G A D + + + GIV T +
Sbjct: 132 IGQDISAVSLYPADGVPRAMWIAPAGSPAPAGPALDAQLWQWSEVRSGIVTVTTPVV-EA 190
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
P + + G++ KGCY GQE+V+R Q R +++R ++
Sbjct: 191 FVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLV 233
>gi|58258597|ref|XP_566711.1| mitochondrion protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106693|ref|XP_777888.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74687704|sp|Q5KP91|CAF17_CRYNE RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|50260588|gb|EAL23241.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222848|gb|AAW40892.1| mitochondrion protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 375
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 50/245 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L+++S +++ G A FL+ + DV Y S L G++L + ++
Sbjct: 7 AHLAHKSVLELSGPDAQKFLKGLSCKDV---EYLAGGYSGFLNASGRVLHTAFVFPRSKN 63
Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQ 106
++++ E L L +KLRS V I ++Q + +W
Sbjct: 64 SYLITHESPEDHPAPLTSLLPPFKLRSKVRIKDVTSQWDAWSAWGSDLQGGPSPIRTWKM 123
Query: 107 EHTFSNSSFIDERFSIADVLLH----------RTWGH---------NEKIASDIKTYHEL 147
++ S D + D+ L W H EK + + T H+L
Sbjct: 124 GSGGASESHWDWEGGVRDLGLRDDEVGCWDLRAGWPHMGRQLLIPKGEKPS--LATSHDL 181
Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
R+ G+ + T+ LP P ++ MD+ G+ KGC++GQE+ R H
Sbjct: 182 GNMDDYELHRMLLGVPEGPTEILPGHALPLESCMDIHGGVDFRKGCFLGQELTVRTYHTG 241
Query: 199 IIRKR 203
RKR
Sbjct: 242 ATRKR 246
>gi|68249068|ref|YP_248180.1| aminomethyltransferase related to GcvT [Haemophilus influenzae
86-028NP]
gi|68057267|gb|AAX87520.1| predicted aminomethyltransferase related to GcvT [Haemophilus
influenzae 86-028NP]
Length = 280
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISK 59
+ L+ I+V G +LQ +T+DV+ ++A G+ LT P+GK+ + + K
Sbjct: 5 ISLTQYQLIEVQGADVEKYLQGQLTSDVV----RLASGATTLTAHCDPKGKMNAIYRLFK 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID 117
+ + L + + S +D L Y + S V +++ I GV+ + T S ID
Sbjct: 61 VSSEQVFLLVKKDILPSALDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNT--DFLPSTIFPHDALMD 173
+ SI LL+ T D K + I G+ + P T +F+P + L
Sbjct: 121 GQRSI---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQAL----NLQA 172
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ IS TKGCYIGQE V+R ++R KR M I
Sbjct: 173 VEQAISFTKGCYIGQETVARAKYRG-ANKRAMFI 205
>gi|222834272|gb|EEE72749.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+L+ G++ KGCY GQEVV+R Q+R +++R + GT D+P + + I + G+
Sbjct: 151 ELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGM 210
Query: 233 VV--------GKKALAIARIDKVDHAIKKGMA 256
+V G + LA +ID + A+ G A
Sbjct: 211 LVNAAPAPQGGWEGLAELKIDAANGALHLGAA 242
>gi|119476432|ref|ZP_01616783.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2143]
gi|119450296|gb|EAW31531.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2143]
Length = 359
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 44/264 (16%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G FLQ T DV + + A TP+G+++ FL++ E + ++L +
Sbjct: 51 LLSISGPDTSKFLQGQTTCDVDLVTCSHSTLGAYCTPKGRVISSFLLASKEPNEYLLRLR 110
Query: 71 RS---KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----------SSFI 116
S S+ K + + + Q + + ++T + +S++
Sbjct: 111 TSVLQSTQSVFSKYIVFSKAEQEVKSDQYVCICLAGETAKNTIQSLFNVATSDIYQTSWL 170
Query: 117 DERFSI---ADVLLHRTW---GHNEKIASDIKTYHELR---------INHGIVDPNTDFL 161
++ F+I D L+H W E++ + EL+ I+ GI D + +
Sbjct: 171 NDNFTIQLDTDGLIHECWILESELEQLWPRLSKGLELKGSRFWELLAISRGIGDVSEQTV 230
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-----------IITGT 210
P + +S KGCY GQE+V+R+Q++ + KRPM ++ G+
Sbjct: 231 -DMFIPQMLNYQITGAVSFNKGCYTGQEIVARMQYKGKL-KRPMYRVKIAANRGELVAGS 288
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234
+ P +P ++D ++G +V
Sbjct: 289 NLYPT--APKFSNDTTPSSIGNIV 310
>gi|312106517|ref|XP_003150732.1| aminomethyltransferase [Loa loa]
gi|307754103|gb|EFO13337.1| aminomethyltransferase [Loa loa]
Length = 246
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 37 KIARGSA----ILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII 92
++A G A +L +G+I+ ++ + + ++E DR+ + L +K+ +V I
Sbjct: 7 QVADGRAQYALLLNSRGRIVEDLILYR-QAGEILIESDRNNQSKLRKLFEMFKVHKDVTI 65
Query: 93 EIQPINGVVLSWNQEHTFSNSSFI----DERF-SIADVLLHRTWGHNEKIASDIKTYHEL 147
E + + V HT S ++ I D R S +L + ++ + D Y E
Sbjct: 66 EEETESCVY------HTDSITNDIPGIQDPRVPSFGKRILSKILPDDQTV--DEHAYRER 117
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R N GI + ++ + P D++NG+S KGCY+GQE+ +R + IRKR +
Sbjct: 118 RFNFGIPEGPSEL--AGELPLFMNADIMNGVSANKGCYLGQELTARALNAPEIRKRLLPF 175
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
T + +GS + ++ G + GKK LA+ I +
Sbjct: 176 TCRGMV--TGSLVNSEGRRAGKVIACTGKKGLALVPISR 212
>gi|260913200|ref|ZP_05919682.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325]
gi|260632787|gb|EEX50956.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325]
Length = 292
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + I++ G+ A +LQ +T DV L +A P+GK++ F + + E F
Sbjct: 18 LQQYTLIEIKGEDAEKYLQGQLTCDVTKLEIGQTTLTAHCDPKGKMVSLFRLIRTEAQCF 77
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ I +S + +D L Y + S V +N ++ E T S I+ + I
Sbjct: 78 YVLIKKSLLPTALDLLKKYAVFSKVTFT--ELNWQIIGLAGETTCKAFSDINAQIRIDIQ 135
Query: 123 ----ADVLLHRTWGHNEKIASDI--KTYHELRINHGI----VDPNTDFLPSTIFPHDALM 172
+L+H T + I ++ + + L I G+ +F+P + +
Sbjct: 136 TQQPRTLLIHPT---SLDITPNMPYQIWDLLDIQDGMPLLSAQTQGEFIPQAL----NVQ 188
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220
+ GIS KGCYIGQE+V+R ++R ++ + G + P GS +
Sbjct: 189 SIEQGISFQKGCYIGQEIVARAKYRGANKRAMFTLVGNSIETPEIGSEV 237
>gi|197334522|ref|YP_002156896.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11]
gi|226730811|sp|B5FAI0|YGFZ_VIBFM RecName: Full=tRNA-modifying protein ygfZ
gi|197316012|gb|ACH65459.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11]
Length = 318
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 22/232 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +T DV++L +GK+ F + D +
Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFH-HNDGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFIDER 119
L +S ++ + ++ Y + S V I I L W +HT SN++ +
Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDDILLGFTGDKALEWINQHTDSNANVRVSK 143
Query: 120 FS----IADV--LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165
F ++D LL T E++ S D + I H + + D L +
Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQLD-DQLCNEH 202
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
P + +NGIS KGCY GQE V+R ++R I ++ +++G + PS
Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGISEAQPSA 254
>gi|116205227|ref|XP_001228424.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51]
gi|88176625|gb|EAQ84093.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51]
Length = 517
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 51/223 (22%)
Query: 19 AIPFLQAIITADVLT-----------LPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64
A +LQ +ITA++ L +A LT QG+ L I + DT
Sbjct: 208 AAKYLQGVITANLFPGYAGPIPTSEHLRSDAGFYAAFLTAQGRTLHDVFIYRDARDTAHP 267
Query: 65 ----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++E+D ++ D L + +KLR+ + + +DE
Sbjct: 268 PGHSWLVEVDAAEADRLQKHICRHKLRAKFDVRL---------------------LDE-- 304
Query: 121 SIADVLLHRTWG--HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
V WG H+ I H R G ++ L + PH++ D ++ I
Sbjct: 305 GEGTVWQAVIWGPPHSPGIKLPPPPLH-ARHPRG----QSELLFNQALPHESNTDAMHAI 359
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKR--PMII-TGTDDLPPSGS 218
KGCY+GQE+ R +HR ++RKR P ++ PP G+
Sbjct: 360 DFRKGCYVGQELTIRTEHRGVVRKRILPCVLYPDNGQQPPPGN 402
>gi|22127159|ref|NP_670582.1| putative global regulator [Yersinia pestis KIM 10]
gi|45443330|ref|NP_994869.1| putative global regulator [Yersinia pestis biovar Microtus str.
91001]
gi|108806367|ref|YP_650283.1| putative global regulator [Yersinia pestis Antiqua]
gi|108813258|ref|YP_649025.1| putative global regulator [Yersinia pestis Nepal516]
gi|145597923|ref|YP_001161999.1| putative global regulator [Yersinia pestis Pestoides F]
gi|150260090|ref|ZP_01916818.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125]
gi|162420968|ref|YP_001608147.1| putative global regulator [Yersinia pestis Angola]
gi|165924945|ref|ZP_02220777.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937370|ref|ZP_02225934.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010263|ref|ZP_02231161.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212747|ref|ZP_02238782.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399919|ref|ZP_02305437.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418709|ref|ZP_02310462.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425340|ref|ZP_02317093.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167467686|ref|ZP_02332390.1| putative aminomethyltransferase [Yersinia pestis FV-1]
gi|170023124|ref|YP_001719629.1| putative global regulator [Yersinia pseudotuberculosis YPIII]
gi|218928072|ref|YP_002345947.1| putative global regulator [Yersinia pestis CO92]
gi|229837585|ref|ZP_04457747.1| predicted folate-dependent regulatory protein [Yersinia pestis
Pestoides A]
gi|229840808|ref|ZP_04460967.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842633|ref|ZP_04462788.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903714|ref|ZP_04518827.1| predicted folate-dependent regulatory protein [Yersinia pestis
Nepal516]
gi|270487493|ref|ZP_06204567.1| folate-binding protein YgfZ [Yersinia pestis KIM D27]
gi|294502935|ref|YP_003566997.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003]
gi|118578000|sp|Q1CB34|YGFZ_YERPA RecName: Full=tRNA-modifying protein ygfZ
gi|118578001|sp|Q7CGT3|YGFZ_YERPE RecName: Full=tRNA-modifying protein ygfZ
gi|118578002|sp|Q1CF05|YGFZ_YERPN RecName: Full=tRNA-modifying protein ygfZ
gi|166979591|sp|A4TIB4|YGFZ_YERPP RecName: Full=tRNA-modifying protein ygfZ
gi|226730813|sp|A9R4L4|YGFZ_YERPG RecName: Full=tRNA-modifying protein ygfZ
gi|226730814|sp|B1JNT4|YGFZ_YERPY RecName: Full=tRNA-modifying protein ygfZ
gi|21960221|gb|AAM86833.1|AE013929_6 hypothetical protein y3283 [Yersinia pestis KIM 10]
gi|45438199|gb|AAS63746.1| Predicted aminomethyltransferase related to GcvT [Yersinia pestis
biovar Microtus str. 91001]
gi|108776906|gb|ABG19425.1| hypothetical protein YPN_3098 [Yersinia pestis Nepal516]
gi|108778280|gb|ABG12338.1| hypothetical protein YPA_0370 [Yersinia pestis Antiqua]
gi|115346683|emb|CAL19566.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209619|gb|ABP39026.1| hypothetical protein YPDSF_0617 [Yersinia pestis Pestoides F]
gi|149289498|gb|EDM39575.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125]
gi|162353783|gb|ABX87731.1| putative aminomethyltransferase [Yersinia pestis Angola]
gi|165914844|gb|EDR33457.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923145|gb|EDR40296.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990749|gb|EDR43050.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166206039|gb|EDR50519.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962703|gb|EDR58724.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050627|gb|EDR62035.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055740|gb|EDR65524.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749658|gb|ACA67176.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
gi|229679484|gb|EEO75587.1| predicted folate-dependent regulatory protein [Yersinia pestis
Nepal516]
gi|229690943|gb|EEO82997.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697174|gb|EEO87221.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704273|gb|EEO91284.1| predicted folate-dependent regulatory protein [Yersinia pestis
Pestoides A]
gi|262360970|gb|ACY57691.1| hypothetical protein YPD4_0782 [Yersinia pestis D106004]
gi|262364910|gb|ACY61467.1| hypothetical protein YPD8_0777 [Yersinia pestis D182038]
gi|270335997|gb|EFA46774.1| folate-binding protein YgfZ [Yersinia pestis KIM D27]
gi|294353394|gb|ADE63735.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003]
gi|320014025|gb|ADV97596.1| putative folate-dependent regulatory protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 330
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104
E +E RS D+ + +L Y + S V+IE QP + GV S
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 105 NQEH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ EH NS+ + ERF + A L+ + G + +D K + L I
Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSPILTDDIE 226
S P +D+E
Sbjct: 255 N----ASRVPAAGEDLE 267
>gi|186896605|ref|YP_001873717.1| putative global regulator [Yersinia pseudotuberculosis PB1/+]
gi|226730812|sp|B2K0P7|YGFZ_YERPB RecName: Full=tRNA-modifying protein ygfZ
gi|186699631|gb|ACC90260.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
Length = 330
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQ----------- 106
E +E RS D+ + +L Y + S V+IE QP + GV S +
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 107 --EH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
EH NS+ + ERF + A L+ + G + +D K + L I
Sbjct: 139 STEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSPILTDDIE 226
S P +D+E
Sbjct: 255 N----ASRVPAAGEDLE 267
>gi|307244858|ref|ZP_07526957.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253812|ref|ZP_07535666.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258268|ref|ZP_07540011.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854303|gb|EFM86509.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863296|gb|EFM95236.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867728|gb|EFM99573.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 279
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
LS I++ G A +LQ +T DV K+A G LT P+GKI + +
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKISALIRLYRQA 58
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115
D FI I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171
++ +I WG + +D + + + I GI + N + +P L
Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
+ N IS +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 220
>gi|165975514|ref|YP_001651107.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250536|ref|ZP_07336733.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251880|ref|ZP_07338051.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|165875615|gb|ABY68663.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302649310|gb|EFL79495.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650524|gb|EFL80683.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 295
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V LS I++ G A +LQ +T DV K+A G LT P+GK+ +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112
+ D FI I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 72 RQAADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168
++ +I WG + +D + + + I GI + N + +P
Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT--- 181
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
L + N IS +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 182 -NLQAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 236
>gi|319638072|ref|ZP_07992836.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
gi|317400717|gb|EFV81374.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
Length = 285
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + +
Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS--SFIDE-RFSIADV 125
++++ +L + LR+ V+ E+ P ++G + H SF+ + + + ++
Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAAPHPAVEPQLSFLAQIQENTVEI 129
Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
L T A + Y HE+R + + T A+ +L
Sbjct: 130 ALPHTGRLKISAAENASEYQAEAENAWNLHEIRSGYPWICAATK--------EAAVAQML 181
Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G +
Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGVI 240
>gi|313215504|emb|CBY16216.1| unnamed protein product [Oikopleura dioica]
Length = 191
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
++ YH R GI + + + FP + DL++G+S KGCY+GQE+ +R H +
Sbjct: 41 LEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGVSFHKGCYLGQELTARTFHTGVT 100
Query: 201 RKR--PMIITGTDDLPP-----SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
RKR P+ + +D+ S I+T D E LA+ R D D +K
Sbjct: 101 RKRIVPLKFSPGNDVSDIKAKRSAGKIITVDSE---------GNGLAMFRTDNFDKTVKV 151
Query: 254 G 254
G
Sbjct: 152 G 152
>gi|311106017|ref|YP_003978870.1| glycine cleavage T-protein family protein [Achromobacter
xylosoxidans A8]
gi|310760706|gb|ADP16155.1| glycine cleavage T-protein family protein [Achromobacter
xylosoxidans A8]
Length = 333
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 44/227 (19%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----EDTFILE--I 69
G A+ FL +T DV LP AR + T +G++L ++ + +D L +
Sbjct: 31 GADALTFLHGQLTQDVTGLPQDAARLAGYCTAKGRLLATLVMWRGAPGGADDAPQLYGLV 90
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLS------------------WNQEHT 109
+ +L+ +L + LR+ + P++ GV S W Q
Sbjct: 91 RQDLSQALLKRLSMFVLRAKAKLAATPLHVAGVTASAAEAAALEAAAGALPRAPW-QRVD 149
Query: 110 FSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT-----------YHELRINHGIVDPN 157
+ ++I AD L W +E++A +H + GI P
Sbjct: 150 LPSGTWIAA--PSADARLRWWWIASDEQLAQSAALAGALGLAPAAQWHTADLAAGI--PW 205
Query: 158 TDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
IF P +DL+ G+S TKGCY GQEVV+R +R +++R
Sbjct: 206 ITAATQDIFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRGTVKRR 252
>gi|225075688|ref|ZP_03718887.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
gi|224952959|gb|EEG34168.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
Length = 285
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + +
Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEH-----TFSNSSFIDERFSIA 123
++++ +L + LR+ V+ E P ++G + + H S S+ I E +
Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFEPMPDLAVSGELADNAEPHPATEPQLSFSAQIQE--NAV 127
Query: 124 DVLLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMD 173
++ L T A + Y HE+R + + T A+
Sbjct: 128 EIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYPWICAATK--------EAAVAQ 179
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+LN + KGCY GQE+++R Q+R +++ +++G D L +G + + E G
Sbjct: 180 MLNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGITVKVGEEEAG 238
>gi|114048794|ref|YP_739344.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
gi|113890236|gb|ABI44287.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
Length = 318
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 24 LSHLGLIKVVGEQGRSFMHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQDALL 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSF--I 116
+L +D+L +L +L+ + + W Q F F I
Sbjct: 84 ML----MPKDTL--ELDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQAVPFVTQHFGEI 137
Query: 117 DERFSI---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
E ++ AD + T E D + L I G PN
Sbjct: 138 TEELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGY--PN--LA 193
Query: 162 PS---TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
PS P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 194 PSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|261380351|ref|ZP_05984924.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
gi|284796872|gb|EFC52219.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
Length = 285
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G++L L+ ED +L + +
Sbjct: 11 VRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED-LLLVMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS--SFIDE-RFSIADV 125
++++ +L + LR+ V+ E+ P ++G + + H + SF + + + ++
Sbjct: 70 DLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAKPHPAAEPQLSFPAQIQENAVEI 129
Query: 126 LLHRTWGHNEKIASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
L T A + Y HE+R + + T A+ +L
Sbjct: 130 ALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYPWICAATK--------ETAVAQML 181
Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
N + KGCY GQE+++R Q+R +++ +++G D L +G + + E G +
Sbjct: 182 NQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKIGEEEAGVI 240
>gi|237807613|ref|YP_002892053.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187]
gi|237499874|gb|ACQ92467.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187]
Length = 299
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 35/242 (14%)
Query: 3 SVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
SVY L + + I++ G A+ +L +T DV+ L + A TP+GK+L F + K E
Sbjct: 13 SVYHLDDITVIRLEGPDAVKYLNGQVTCDVMALNPGQSILGAHCTPKGKVLAVFRLFKRE 72
Query: 62 EDTFIL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+D ++ E+ + L +F K+ + + + G+ + +
Sbjct: 73 QDLLLIYKKELTEIQLAELKKYAVFSKVTITDVSDQFDVFGIAGTGTDAWLATGPG---- 128
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF--------LP-------S 163
AD + + I S+ + EL++ P TD+ LP +
Sbjct: 129 ----ADNIQCQINPDRWLILSEKQQPLELKLPEC---PATDWRGLDILDGLPQFGKNAQA 181
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + L+GIS TKGCY GQE+V+R ++R + I+ GT SG P+ T+
Sbjct: 182 EFIPQAFNLQALHGISFTKGCYTGQEIVARAKYRGTNNRALFILKGT-----SGQPVNTN 236
Query: 224 DI 225
+
Sbjct: 237 TV 238
>gi|284105831|ref|ZP_06386235.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283830118|gb|EFC34384.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 364
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 48/268 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S++ + V G+ + +LQ+II+ D+L L S+ ++ +GKIL YF + ++EE
Sbjct: 48 VSHRGLLHVTGEDRVTWLQSIISNDLLPLQSGDWLYSSFMSHKGKILSYFRVYRLEESLV 107
Query: 66 ILEIDRSKRDSL--IDKLLFYKLRS---------NVIIEIQP------------------ 96
+ ++ S + K L Y ++ +I+ P
Sbjct: 108 VEDVGESGAVTYDTFRKFLLYGTKAKMKNGEDTWGIILVSGPKAPLLIRHALDVDISGLK 167
Query: 97 --------ING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143
+NG +++ QE + + ++ D R W E + A
Sbjct: 168 QGGFLTHDLNGQPALIATTQETGERDVELLMPNEAM-DQAWSRLWEAGEAVGLRAFGTAA 226
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI GI D L I P +A ++ SL+KGCY GQEVV+R+ +++R
Sbjct: 227 RESLRIEAGIPKLGPD-LNERIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGTVKRR 284
Query: 204 --PMIITGTD-DLPPSGSPILTDDIEIG 228
++I + +P + + ++D E+G
Sbjct: 285 LVGLVIDSPEAPIPSPDAKVFSEDREVG 312
>gi|168027952|ref|XP_001766493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682402|gb|EDQ68821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R+ G+ + +T+ P + + LN I KGCY+GQE+V+R HR +IRKR M
Sbjct: 280 RMEQGVAEGSTEIPKGEAIPLEYNLAGLNAIDFNKGCYVGQELVARTHHRGVIRKRVM 337
>gi|325283646|ref|YP_004256187.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP]
gi|324315455|gb|ADY26570.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP]
Length = 309
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 59/309 (19%)
Query: 1 MSSVY-LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
MS+ + L ++V G + F+Q +T D+ P + L +G+I + I +
Sbjct: 1 MSTFFTLVPSGALRVTGADRLDFVQGQMTNDLRGCPTPGYVAACFLNVRGQIEHFARIYR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------GVVLSWN 105
+D + L +D + +L ++L Y + V EIQ ++ GV W
Sbjct: 61 RADDIY-LHLDAGQAPALAERLRRYVIFDQV--EIQDLSADLRTLHLWGEWPAGVTEGWP 117
Query: 106 QEHTFSNSSFIDERFSIADVL------------LHRTWGHNEKIASDI--------KTYH 145
Q + +++ + A +L LH E + + + +++
Sbjct: 118 QVAAAAGAAWTVQMGGAAVLLGAVNRSGQLGLDLHYLAAQEEAVMAALHTALPLNERSWA 177
Query: 146 EL---RINHGIVDPNTD-FLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRN 198
EL R+ G+ +P D FL P + +D L IS KGCY+GQE+++R++ R
Sbjct: 178 ELQTARVAAGLPEPALDGFLGH--LPQEVGLDTGGPLPAISYRKGCYVGQEIMARLEARG 235
Query: 199 IIR---KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
R R + GT+ GS +++ +G G+ G AL R+D + +
Sbjct: 236 RARYGLGRLRVPAGTE----VGSEVVSAGRAVGQTGLEAGGLALCRLRLD-----LPQDA 286
Query: 256 ALTVHGVRV 264
AL V+G V
Sbjct: 287 ALEVNGQAV 295
>gi|254514102|ref|ZP_05126163.1| glycine cleavage T protein [gamma proteobacterium NOR5-3]
gi|219676345|gb|EED32710.1| glycine cleavage T protein [gamma proteobacterium NOR5-3]
Length = 302
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 24/246 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +L ++ I + G FLQ +T D L IA A+ +G++L L+ ++ +
Sbjct: 5 ACFLPKEAMIHLRGSKIPEFLQGQLTCDTRKLSPGIAVMGALCNVKGRVLSDLLVVQVSD 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----SSFID 117
+L + RS S+ D L Y S + +E ++ + + +
Sbjct: 65 THVVLRLRRSLATSVADTLRRYAQFSRISVEPDSREDAIVGLRESVVTPTPDALPAGHMA 124
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHEL--RINHGIVDPNTDFLPSTI---------- 165
V L RT G +E ++ D +L +N +D + T+
Sbjct: 125 ASIRTGTVTLQRTPGLSEILSVDPDNPIDLADTLNERTMDAEPRWAMETLRSGHYAVELE 184
Query: 166 ----FPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGS 218
F AL DL ++ KGCY GQE+V+R+ ++ ++R I + + P +
Sbjct: 185 DLGAFTPQALNYDLTGLVAFNKGCYTGQEIVARLHYKGQSKRRLQIFETPESVNGPARDT 244
Query: 219 PILTDD 224
P+ T +
Sbjct: 245 PLQTSE 250
>gi|76155821|gb|AAX27094.2| SJCHGC03303 protein [Schistosoma japonicum]
Length = 242
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
DI YH R G+ + +F+ + P +A DL G+S +KGCYIGQE+ +R +
Sbjct: 33 DISLYHTARWELGLPEGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGV 92
Query: 200 IRKR--PMIITGTDDL 213
IR+R P+ I T ++
Sbjct: 93 IRRRYVPIKILSTGNI 108
>gi|29653776|ref|NP_819468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 493]
gi|153209655|ref|ZP_01947468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii 'MSU Goat Q177']
gi|154707625|ref|YP_001424980.1| aminomethyltransferase family protein [Coxiella burnetii Dugway
5J108-111]
gi|161830229|ref|YP_001596362.1| glycine cleavage T-protein [Coxiella burnetii RSA 331]
gi|165924115|ref|ZP_02219947.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 334]
gi|212218958|ref|YP_002305745.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154]
gi|29541039|gb|AAO89982.1| aminomethyltransferase family protein [Coxiella burnetii RSA 493]
gi|120575283|gb|EAX31907.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii 'MSU Goat Q177']
gi|154356911|gb|ABS78373.1| aminomethyltransferase family protein [Coxiella burnetii Dugway
5J108-111]
gi|161762096|gb|ABX77738.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 331]
gi|165916438|gb|EDR35042.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 334]
gi|212013220|gb|ACJ20600.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154]
Length = 258
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
FI V G++A FLQ +T DV + A P+G+++ F + + +D + L +
Sbjct: 12 GFILVKGENAATFLQGQLTCDVREINEIRGALGACCDPKGRMVANFFVFQKNKDYYFL-L 70
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+S I L Y + S V E+ +N E +S+ ++ L
Sbjct: 71 PKSMISITIAHLKKYAVFSKV--ELLAVNEA-----------------ETYSLPEITLKE 111
Query: 130 TWGHNEKIASDIKTYHELRINHGIV--DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
D + L + G+V P T + P + GIS TKGCYIG
Sbjct: 112 L---------DENDWRSLNVRAGLVWVYPQTS---GKLIPQMINLQKWGGISFTKGCYIG 159
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
QE+++R +H +++ + PP+ L + + T+G+VV
Sbjct: 160 QEIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND-QTMGIVV 205
>gi|46143319|ref|ZP_00204442.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207545|ref|YP_001052770.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae L20]
gi|190149326|ref|YP_001967851.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|126096337|gb|ABN73165.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914457|gb|ACE60709.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
Length = 295
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V LS I++ G A +LQ +T DV K+A G LT P+GK+ +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112
+ D FI I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 72 RQAADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168
++ +I WG + +D + + + I GI + N + +P
Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT--- 181
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
L + N IS +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 182 -NLQAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 236
>gi|226356920|ref|YP_002786660.1| aminomethyltransferase [Deinococcus deserti VCD115]
gi|226318910|gb|ACO46906.1| putative aminomethyltransferase [Deinococcus deserti VCD115]
Length = 309
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S +++ G + F+ +T D+ P A L +G+I + + E+D + L +
Sbjct: 27 SSLRITGADRVDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRREQDIY-LHL 85
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE--------IQPINGVVLSWNQEHTFSNSSFID---- 117
D + L +L Y + V +E + + V W + + S +
Sbjct: 86 DAGQAPGLAARLKRYIIFDQVEVEDVTDTLRTVHVWDQAVPGWLTDGPAAQSLDLGGAVT 145
Query: 118 -----ERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTDFLPSTI 165
R + V LH E + + + R+ GI D D + +
Sbjct: 146 LAGRVNRSGTSGVDLHYLARQEEDVLNALGGQEAPLDELETARVRAGIPDIVRDGF-TGV 204
Query: 166 FPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
P + +DL L IS KGCY+GQE+++R++ R R ++GTD L
Sbjct: 205 LPQEVGLDLGGPLPAISYRKGCYVGQEIMARLEARGNTRYHLARLSGTD---------LP 255
Query: 223 DDIEIGTLGVVVGKK-----ALAIARIDK 246
D E+ G VVG+ L++AR+ K
Sbjct: 256 DHAEVTAEGKVVGQSGHFAGGLSLARLRK 284
>gi|117921854|ref|YP_871046.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
gi|117614186|gb|ABK49640.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
Length = 318
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK++ F I+E
Sbjct: 24 LSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMIASFRTFAIQEALL 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF--IDERFS 121
+L + R + + +L Y + S + +L + Q F F I E +
Sbjct: 84 ML-LPRETIEVDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQATQFVTQHFGEITEELT 142
Query: 122 I---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS--- 163
+ AD + T E D + L I G PN PS
Sbjct: 143 LVEHGAILKDADRFILVLQPEAATTLVGEHTVFDASAWQALEITAGY--PN--LAPSHAN 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGT 245
>gi|317509404|ref|ZP_07967023.1| aminomethyltransferase folate-binding domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
gi|316252327|gb|EFV11778.1| aminomethyltransferase folate-binding domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
Length = 323
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 15/202 (7%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
++V SN I++ G + +L I+T V LP + IL GK+ + + +
Sbjct: 20 AAVDRSNLDVIRLTGPERLDWLNKIVTQKVDELPAASQTQALILDAHGKVEHHMRVFETG 79
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
EDT L + K L+D L + V+ E P V+ ++ Q F + E F
Sbjct: 80 EDTTWLVTEPGKGAPLLDYLRKMVFWAKVVPEAAPDRKVIATFEQGKRF-EAVHPSESFE 138
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP----NTD--FLPSTIF---PHDALM 172
L T G + T+ + + ++P +TD LP + P A +
Sbjct: 139 EVWATLTSTRGFR-----PVGTWADEALRVAALEPRLGLDTDERTLPHEVGWVNPRGAEL 193
Query: 173 DLLNGISLTKGCYIGQEVVSRI 194
+ L KGCY GQE VS+I
Sbjct: 194 AEWKAVHLNKGCYRGQETVSKI 215
>gi|322513844|ref|ZP_08066926.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976]
gi|322120331|gb|EFX92270.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976]
Length = 295
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V LS I++ G A +LQ +T DV K+A G LT P+GK+ +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTSHCDPKGKMSALIRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSN 112
+ D F+ I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 72 RQAADKFVAMIHVDLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTAL 131
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPH 168
++ +I WG + +D + + + I G+ + N + +P
Sbjct: 132 VIPQGQKRAI-------VWGETLETNADSQLWDLINIQDGVPILLKANQFELIPQAT--- 181
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSPI 220
L + N IS TKGCYIGQE V+R ++R KR M G LP G I
Sbjct: 182 -NLQAVENAISFTKGCYIGQETVARAKYRG-ANKRAMFTLVGKFEGEVSLPEIGGSI 236
>gi|148981090|ref|ZP_01816283.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3]
gi|145960993|gb|EDK26317.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3]
Length = 323
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 45/238 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMVGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83
Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104
S IE + ++EI + S +D + S+VII + Q I+ + S
Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKVD----IEQTSDVIIGVMGAAADQYIDSISESQ 137
Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ S + + + R+++ A+ L+ T EK++ + YHE I+D
Sbjct: 138 GKVRAISGGTAVQVAENRWALLVTEQAAEALV--TSSSAEKVSEALWQYHE------IID 189
Query: 156 PN---TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
T + P + + GIS TKGCY GQE V+R ++R + ++ I++G+
Sbjct: 190 AQPHLTKAEQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKREMRIVSGS 247
>gi|325123348|gb|ADY82871.1| hypothetical protein BDGL_002285 [Acinetobacter calcoaceticus
PHEA-2]
Length = 240
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + KI ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENTTRYTAICDLKGRIHFGLWLKKINAESFEIVVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q G+V N + F+ + + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GIVFPKVVNHQTEFTTAETDISEWQKQAIMTGQAWIT 129
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 130 Q-------TTEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT + P S + L +D+E+ G L +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDVEVVNSIANDEGYLALVVAKPA 216
>gi|108803026|ref|YP_642963.1| glycine cleavage T protein [Rubrobacter xylanophilus DSM 9941]
gi|108764269|gb|ABG03151.1| glycine cleavage T protein (aminomethyl transferase) [Rubrobacter
xylanophilus DSM 9941]
Length = 309
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR---NIIRKRP 204
RI G+ TDF P FP +A + L +S KGCY GQE V+R+++R N +R
Sbjct: 188 RIAAGVPRFGTDFTPEN-FPAEAGL-LERAVSFEKGCYPGQETVARMRYRGHPNRTLRRL 245
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTL 230
++ +GT PP + IL D GTL
Sbjct: 246 LVASGTPPAPP--AEILQGDRRAGTL 269
>gi|221068070|ref|ZP_03544175.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1]
gi|220713093|gb|EED68461.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1]
Length = 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 23/244 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D
Sbjct: 15 ISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSADEI 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+L DRS + +L + LR+ + + + + ++ +++
Sbjct: 75 VLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLTGQAAQHHAGAAAAPWTLSQQ 134
Query: 123 --ADVLLHRTWGHNEK---------------IASDIKTYHELRINHGIVDPNTDFLPSTI 165
A VL N++ ++ D+ + E + G+ + + + +
Sbjct: 135 GDAHVLALYPAAGNQRALWIGPAGQAPEGQLLSEDLWQWSE--VQSGVATLSAPVVDAFV 192
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L +D+
Sbjct: 193 -PQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQALSVGQEVFSAEDL 251
Query: 226 EIGT 229
E T
Sbjct: 252 EQAT 255
>gi|227541048|ref|ZP_03971097.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183308|gb|EEI64280.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 409
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLI 57
+S V SN+ + V G FL +++ IA G+ + L G+I +
Sbjct: 112 LSLVDRSNRVILSVTGDDREAFLTNLLSK-------IIAPGATMALDLDANGRIQHEMDV 164
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
+ E++ F++ + + ++L D L+ S V I I P+ V + +HT +++F
Sbjct: 165 AVTEDEVFLI-VSPHEAETLRDYLVAMIFWSKVEITISPLQLVTVF--GKHTPLDAAFAR 221
Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + AD +L + N ++A + ++ RI G D D
Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQ----NGQLAG-LMSFEAYRIARGEPDHPVDCDEK 276
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD----DLPPSGS 218
TI PH+ + L + L KGCY GQE V+R++ N+ R R +++T D LP +
Sbjct: 277 TI-PHEVGLWLAEAVDLDKGCYRGQETVARVE--NLGRAPRALVVTLLDGSVPQLPAPQT 333
Query: 219 PILTDDIEIGTLGVVV 234
P+ +GTLG VV
Sbjct: 334 PVTLAGRTVGTLGSVV 349
>gi|307247033|ref|ZP_07529087.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307249255|ref|ZP_07531252.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251578|ref|ZP_07533485.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256077|ref|ZP_07537865.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307260509|ref|ZP_07542203.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306856485|gb|EFM88634.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306858779|gb|EFM90838.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861042|gb|EFM93048.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865499|gb|EFM97394.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869821|gb|EFN01604.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 279
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
LS I++ G A +LQ +T DV K+A G LT P+GK+ + +
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLYRQA 58
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115
D FI I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171
++ +I WG + +D + + + I GI + N + +P L
Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
+ N IS +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV 220
>gi|330446930|ref|ZP_08310581.1| folate-dependent regulatory protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491121|dbj|GAA05078.1| folate-dependent regulatory protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 327
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 37/244 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + +LQ +T DV++L + +A +GK+ + IE
Sbjct: 29 LDDWGMVTLIGPDSKAYLQGQLTCDVVSLEAGKSTLAAHCDAKGKMRTVMRLFHIENGYG 88
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L+ +S + I +L Y + S +I P + +VL + E + I+ F+ D
Sbjct: 89 YLQ-RQSVMATQIPELKKYAVFSKT--DITPSDNIVLGLSGEQA---QAAINAYFTEGDE 142
Query: 126 LLH-----------RTW------GHNEKIA---------SDIKTYHELRINHGI--VDPN 157
+ H + W H E IA SD + IN + VD
Sbjct: 143 VRHNEIATAVKVDAQRWFIIASPEHAETIAQHFAADATFSDSTLWDLYDINAALPRVDSA 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
T+ P + +NGIS KGCY GQE V+R ++R I ++ I+TG P
Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPQA 259
Query: 218 SPIL 221
L
Sbjct: 260 GDAL 263
>gi|90412075|ref|ZP_01220082.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK]
gi|90327053|gb|EAS43432.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK]
Length = 329
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 38/254 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I + G +LQ +T DV++LP + A +GK+ F +
Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPVNSSTLGAHCDAKGKMRTIFRLFNH 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E L+ +S D+ + +L Y + S V +I N V+L + E + ID+ F
Sbjct: 84 NEGYGFLQ-RKSVMDTQLPELKKYAVFSKV--DIDASNDVLLGLSGEQA---QAVIDQHF 137
Query: 121 SIADVLLHRTWGHNEKIASD------------------IKTYHELRINHGIV-------- 154
+ T G K+ D ++T++ ++++ +
Sbjct: 138 PGNGDVRVITAGTAIKVNDDRWLFAIAPEQAEQLINTLVETHNSMQLSDSTLWDLYDVLY 197
Query: 155 -DPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P D + + F P + ++GIS KGCY GQE V+R ++R I ++ I+TG
Sbjct: 198 AIPRVDAVTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTG--- 254
Query: 213 LPPSGSPILTDDIE 226
+ P+ D +E
Sbjct: 255 -EATQCPLTGDALE 267
>gi|260548872|ref|ZP_05823094.1| glycine cleavage T protein [Acinetobacter sp. RUH2624]
gi|260408040|gb|EEX01511.1| glycine cleavage T protein [Acinetobacter sp. RUH2624]
Length = 240
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + KI ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINAESFEIVVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q GVV N FS++ + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GVVFPKVVNDHTEFSSTETDISEWQKQAIMTGQAW-- 127
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
IA T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKALAIARI 244
+ + + ++ GT D PS + L +D+E+ G + +VV K A A+A +
Sbjct: 165 LWFKAKPKHWLHLVQGTGD-APSPATQLHNDVEVVNSTQTTDGYIALVVAKPA-ALAEL 221
>gi|325579260|ref|ZP_08149216.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392]
gi|325159495|gb|EGC71629.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392]
Length = 279
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ +
Sbjct: 5 ISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGTSTLTAHCDPKGKMNSLFRLIKLSAE 64
Query: 64 TFIL--------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
F++ +D K+ ++ K+ F L ++ I G + + + N +
Sbjct: 65 QFLILMPKALLAPLDHLKKYAVFSKVTFQVLDWQIVGLIGEKCGRIHAQIELDIDENRAI 124
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171
+ S+ DV + D K + I G+ + +F+P + L
Sbjct: 125 LINPTSL-DVTFN----------GDDKQWLCADIQAGLPSLSAETQNEFIPQAL----NL 169
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI 220
+ IS TKGCYIGQE V+R ++R ++ +++G + P GS I
Sbjct: 170 QAIEQAISFTKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219
>gi|152981354|ref|YP_001353678.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
gi|151281431|gb|ABR89841.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
Length = 349
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 43 LTHLGLIAASGDDAANFLHNQLTNDVEHLGSSEARLAGYCSPKGRLLASFLYWQTA-DRI 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQ--PINGVVLSW--------- 104
+L++ R + ++ +L + LR+ V++ I ++ W
Sbjct: 102 MLQLPRELQATIQKRLQMFILRAKAKLADVSEEYVMLGIAGPAAASALMPWFPTLPVAIY 161
Query: 105 ----NQEHTF--SNSSFIDERFSIADVLLH--RTWGHNEKI--ASDIKTYHELRINHGI- 153
N+ T +++F R+ + W H +I AS +H I+ G+
Sbjct: 162 GKVDNEAGTVIRHSNAFEVPRYQWITTVEQAIEAWPHLTEILQASGADAWHLAEIDGGVP 221
Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
F+P I +LL G++ KGCY GQE+V+R Q+ +++R + + T
Sbjct: 222 HITAATQEQFVPQMIN-----FELLGGVNFKKGCYPGQEIVARSQYLGKLKRRMLHASVT 276
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKK 237
G+ I + + G+VV +
Sbjct: 277 ATQVAPGTEIFSANDPDQPCGMVVNAE 303
>gi|91788384|ref|YP_549336.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
sp. JS666]
gi|91697609|gb|ABE44438.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
sp. JS666]
Length = 317
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I+V G+ + FLQ +T DV L AR A +G++ F+I K +
Sbjct: 20 LAHLGVIRVAGEDTVKFLQGQLTQDVALLSLSEARLGAFCNVKGRMQASFVIFKRSPEEV 79
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQ-EHTFSNSSFIDERFSI 122
+L R + + +L + LR+ ++ + ++ N E + + + I
Sbjct: 80 LLVCSRDILPATLKRLSMFVLRAKAMLSDASAEFALYGVAGNAIELIVGGNRPVWTKSDI 139
Query: 123 AD---VLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPSTIF 166
D + LH G + DI ++ L + GI + +
Sbjct: 140 GDASLMFLHPGAGQPRALWCAPAGSPRPEGPLLDIARWNWLEVRSGIAMITQPIFEAFV- 198
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P + + G++ KGCY GQE+V+R Q R +++R
Sbjct: 199 PQMLNYESVGGVNFKKGCYPGQEIVARSQFRGTLKRR 235
>gi|332289497|ref|YP_004420349.1| putative global regulator [Gallibacterium anatis UMN179]
gi|330432393|gb|AEC17452.1| putative global regulator [Gallibacterium anatis UMN179]
Length = 296
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N I++ G + FLQ +T DV+ + + +A P+GK++ F + K + F
Sbjct: 14 LNNYCVIEINGVDSQTFLQGQLTCDVVNMSANSSTLAAHCDPKGKVISLFRLIKFSAEQF 73
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIAD 124
D S + +L Y + S V + ++ S E N D E + AD
Sbjct: 74 WFVFDNSLLPLALQQLKKYAVFSKVTFVEKNLHIATFS---EDCLPNDLTTDAEVTTTAD 130
Query: 125 VLLHRTWGHN---------EKIASD-IKTYHELRINHG----IVDPNTDFLPSTIFPHDA 170
L R N E+ S+ + + L I +G +F+P +
Sbjct: 131 KTLVRVNAENDFYLLFSESEQAQSEQAEQWKWLNIVNGEPLFTAVAQGEFIPQAL----N 186
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHR 197
L L IS TKGCYIGQE ++R ++R
Sbjct: 187 LQHLEQAISFTKGCYIGQETIARAKYR 213
>gi|192361074|ref|YP_001982679.1| hypothetical protein CJA_2216 [Cellvibrio japonicus Ueda107]
gi|190687239|gb|ACE84917.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 322
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 56/240 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L N + V G A FLQ IT D+ L + A +P+G++LL F +++ D
Sbjct: 15 CHLPNTGLLLVEGPDAAKFLQGQITCDIRELADQKVLLGAQCSPKGRVLLNFYAVQLQPD 74
Query: 64 TFILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
T L + R+ + SL ++F K + + I G+ +SS +D+
Sbjct: 75 TIALRLPRNILEQAQISLGKYIVFSKAKLRKADDAYAIIGL-----------HSSRLDDF 123
Query: 120 FSIADVLLHR--TW-----------------------------GHNEKIASDIKTYHE-- 146
+I + H TW G + + ++T ++
Sbjct: 124 SNILGTIPHEPLTWIDTPQGIIWRLDETHMELWLKSLTALAPLGQSLAEVASLRTENDWN 183
Query: 147 -LRINHGIVDPNTDFLPST---IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+I GI T P T P + + L+NG++ KGCY GQE+V+R+ +R ++
Sbjct: 184 LAQIQRGI----TCITPETYEQFTPQELNLTLVNGVNFRKGCYTGQEIVARLHYRGHAKR 239
>gi|160873993|ref|YP_001553309.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS195]
gi|160859515|gb|ABX48049.1| folate-binding protein YgfZ [Shewanella baltica OS195]
gi|315266222|gb|ADT93075.1| folate-binding protein YgfZ [Shewanella baltica OS678]
Length = 320
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+L + + + + +L Y + S + +L E S F+ E F
Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFLSEHFGDIHQ 139
Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160
AD +L+ +A D + L I G PN
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217
S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257
Query: 218 SPILTDD 224
I +D
Sbjct: 258 LEIAMED 264
>gi|238899111|ref|YP_002924793.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259710251|sp|C4K7V2|YGFZ_HAMD5 RecName: Full=tRNA-modifying protein ygfZ
gi|229466871|gb|ACQ68645.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 336
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 45/242 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL----------- 52
+ L++ I+V GK + +LQ IT DV L A P+GKIL
Sbjct: 23 ILLNDWGLIRVTGKDRVKYLQGQITLDVPLLKENQHILGAHCDPKGKILSTVRLFHYLKG 82
Query: 53 ------------------LYFLISKIE----EDTFILEI--DRSKRDSLIDKLLFYKLRS 88
Y + SK+E E T +L I D++++ + K F KL +
Sbjct: 83 LAFITRKSLLHDELMELRKYAVFSKVEIDIAESTVLLGIAGDQARK---VLKNCFEKLPT 139
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ + +L ++ + + F D L+ + ++ + + + L
Sbjct: 140 ETEPVVHEDDYSLLHFSSPR--ERFLLVSQAFKEGDFLIQKL--QDQAVFRSSEQWLALD 195
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I G P D T F P A + L GIS TKGCY GQEVV+R ++R + +K +
Sbjct: 196 IESGF--PIIDAKNKTQFIPQAANLKALGGISFTKGCYTGQEVVARTEYRGVNKKALYWL 253
Query: 208 TG 209
TG
Sbjct: 254 TG 255
>gi|321249108|ref|XP_003191342.1| mitochondrion protein [Cryptococcus gattii WM276]
gi|317457809|gb|ADV19555.1| Mitochondrion protein, putative [Cryptococcus gattii WM276]
Length = 375
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+LS++S +++ G A FL+ + DV Y S L G++L I ++
Sbjct: 7 AHLSHKSVLELSGPDAQKFLKGLSCKDV---EYLGGGYSGFLNASGRVLHTAFIFPRSKN 63
Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQ 106
++++ E L+ L +KLRS V I ++Q + +W
Sbjct: 64 SYLITHESPEDHPAPLLSLLPPFKLRSKVRIKDVTNQWDAWSAWGSDLQGGPHPIRTWKM 123
Query: 107 EHTFSNSSFIDERFSIADVLLH----RTW-----------------GHNEKIAS--DIKT 143
++ S D I D+ L W G +A+ D+
Sbjct: 124 GSGGASESHWDWEGGIRDLGLRDDEAGCWDLRAGWPRMGRQLLVPKGEKPSLATSHDLGN 183
Query: 144 YHELRINH---GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
H+ ++ G+ + + LP P ++ MD+ G+ KGCY+GQE+ R H
Sbjct: 184 VHDYELHRMLLGVPEGPKEILPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 243
Query: 201 RKR 203
RKR
Sbjct: 244 RKR 246
>gi|89094638|ref|ZP_01167575.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92]
gi|89081108|gb|EAR60343.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92]
Length = 338
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 103/253 (40%), Gaps = 37/253 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI---LTPQGKILLYFLISKI 60
+ L +Q + V G FLQ +T DV + +RGSA+ +G +L F + K
Sbjct: 33 IPLIHQRVLSVKGPDTEKFLQGQLTCDVAEV---FSRGSALGAHCNIKGHMLSLFRLLKA 89
Query: 61 EEDTFILEIDRSKRDSLIDKL----LFYKLR-SNVIIEIQP--INGVVLSWNQEHTFSNS 113
E+ +L + + DS + L +F K S V EI I G E F +
Sbjct: 90 GEEEVLLRMSQDIFDSAANNLKKYIVFSKAEASEVSDEISGLGITGPGAEALVEQFFGRA 149
Query: 114 SFIDER-FSIADVLLHRTWGHNEKIASDIKTYHEL-------------------RINHGI 153
D +++ L+ R G+ +I EL I GI
Sbjct: 150 PSEDNGILPLSNGLVVRVPGNRFEIWMATAELCELLSKLPDEVSIGSTDAWVLSEIEAGI 209
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--IITGTD 211
D + P L+G+S KGCY GQE+V+R+QHR + K+PM I G D
Sbjct: 210 PDLR-EATQEAFIPQMTNFQALDGVSFKKGCYTGQEIVTRLQHRGQL-KKPMYLIEVGGD 267
Query: 212 DLPPSGSPILTDD 224
P +G I + D
Sbjct: 268 KKPMAGDVITSPD 280
>gi|301155519|emb|CBW14987.1| predicted folate-dependent regulatory protein [Haemophilus
parainfluenzae T3T1]
Length = 279
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+ +
Sbjct: 5 ISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGASTLTAHCDPKGKMNSLFRLIKLSTE 64
Query: 64 TFIL--------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
F++ +D K+ ++ K+ F L ++ I G + + + N +
Sbjct: 65 QFLILMPKALLAPLDHLKKYAVFSKVTFQVLDWQIVGLIGEKCGRIHAQIELDIDENRAI 124
Query: 116 IDERFSIADVLLHRTWGHNEK--IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ + L T+ +EK + +DI+ + + +F+P + L
Sbjct: 125 L-----LNPTPLDVTFNGDEKQWLCADIQA----GLPSLSAETQNEFIPQAL----NLQA 171
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI 220
+ IS TKGCYIGQE V+R ++R ++ +++G + P GS I
Sbjct: 172 IEQAISFTKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219
>gi|86146368|ref|ZP_01064692.1| hypothetical protein MED222_22346 [Vibrio sp. MED222]
gi|85835847|gb|EAQ53981.1| hypothetical protein MED222_22346 [Vibrio sp. MED222]
Length = 323
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83
Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104
S IE +E+ K+ ++ K+ + S+V+I + Q I+ + S
Sbjct: 84 YALMQPKSAIE-----IELVEIKKYAVFSKVDIEQT-SDVVIGVMGASADQYIDSISESQ 137
Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ S + + D R+++ A+ L+ + EK++ + YHE I+D
Sbjct: 138 GKVRVISGGTAVQVSDNRWALLVTQEAAEALVSSS--TAEKVSEALWQYHE------ILD 189
Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT
Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247
>gi|307824019|ref|ZP_07654246.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96]
gi|307734803|gb|EFO05653.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96]
Length = 326
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G A FLQ IT ++ + + A+ P+G+ + FL+ K +D F++ + +
Sbjct: 44 LTIAGSDAAKFLQGQITCNINDITDAKSSLGALCNPKGRAITTFLLVKNADD-FLMILPQ 102
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV------ 125
S+ +L Y LRS V + + + L + ++RF+ +
Sbjct: 103 ELLASVKKRLQMYVLRSKVTL-TDSSDALCLIGLYDEASQPGEVPEQRFATSSQENIVVN 161
Query: 126 LLHRT------------WGHNEKIA---SDIKTYHELRINHGI----VDPNTDFLPSTIF 166
L +R W K+ D + L I GI + + +F+P +
Sbjct: 162 LQNRNLIIAGADNAQGLWEKQVKLGFQPEDSAQWRYLDIISGIPWLTAETSEEFIPQMLN 221
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTD 223
+D L GIS KGCY GQE+V+R + KR M + D L P S I+ D
Sbjct: 222 -----LDKLGGISFNKGCYTGQEIVARTHYLGKA-KREMFLAECDALATPEPNSTIIDD 274
>gi|307262639|ref|ZP_07544269.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306872062|gb|EFN03776.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 279
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
LS I++ G A +LQ +T DV K+A G LT P+GK+ + +
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAEGEHTLTCHCDPKGKMSALIRLYRQA 58
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQ-PINGV----VLSWNQEHTFSNSSF 115
D FI I +++L Y + S V E+ PI GV +L+ E+T +
Sbjct: 59 ADKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIP 118
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI---VDPNT-DFLPSTIFPHDAL 171
++ +I WG + +D + + + I GI + N + +P L
Sbjct: 119 QGQKRAI-------VWGETLETNADSQLWDLIDIQDGIPMLLKANQFELIPQAT----NL 167
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
+ N IS +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 168 QAVENAISFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 220
>gi|308814228|ref|XP_003084419.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri]
gi|116056304|emb|CAL56687.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri]
Length = 248
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 42 SAILTPQGKILLYFLISKIEEDT------FILEIDRSKRDSLIDK-----LLFYKLRSNV 90
A LTP GKI++ ++ ++ D ++L++D +K D + + L LR
Sbjct: 14 GAALTPNGKIVVDAFVAALDGDATRGTGEYVLDVDAAKMDEVRCRRTMKWLRRMSLRKRC 73
Query: 91 IIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----Y 144
++E + VV+S E + D R A + G K +S + +
Sbjct: 74 VVEDAREAFDVVVSTRAEDGLAP----DPRSRTASGVALGFRGVAAKSSSAAREDATFLH 129
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR- 203
RI G+ + + FP + D L+ +S +KGCY+GQE +R + R +RKR
Sbjct: 130 ASHRIALGVGEGYEEL--GGTFPLECNFDALDAVSFSKGCYVGQENTARQRFRGAVRKRV 187
Query: 204 -PMII 207
P+++
Sbjct: 188 APVVL 192
>gi|212213082|ref|YP_002304018.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212]
gi|212011492|gb|ACJ18873.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212]
Length = 258
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
FI V G++A FLQ +T DV + A P+G+++ F + + +D + L +
Sbjct: 12 GFILVKGENAATFLQGQLTCDVREINEIRGTLGACCDPKGRMVANFFVFQKNKDYYFL-L 70
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+S I L Y + S V E+ +N E +S+ ++ L
Sbjct: 71 PKSMISITIAHLKKYAVFSKV--ELLAVNEA-----------------ETYSLPEITLKE 111
Query: 130 TWGHNEKIASDIKTYHELRINHGIV--DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
D + L + G+V P T + P + GI+ TKGCYIG
Sbjct: 112 L---------DENDWRSLNVRAGLVWVYPQTS---GKLIPQMINLQKWGGINFTKGCYIG 159
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
QE+++R +H +++ + PP+ L + + T+G+VV
Sbjct: 160 QEIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND-QTMGIVV 205
>gi|188997079|ref|YP_001931330.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932146|gb|ACD66776.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ I+T +V L K + +L +G + F + K + + +IL+ + RD +++KL
Sbjct: 32 FLQGILTNNVAQLNDKEFNYNLMLDHKGSPIWDFYVFK-DNENYILDFEFD-RDEVLNKL 89
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSI---ADVLLHRT------ 130
KL V E+ + + F +F + E+F D+ +
Sbjct: 90 KQLKLSYQVFFEVLEFEHIYIFGEDSEKFIQQTFKEAPEKFKYLKSGDIYIANNPLRLGQ 149
Query: 131 -----WGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+G+ E I S++ T + LRIN+ I + + + +
Sbjct: 150 KGFDIFGNLESIKSNLPTDLKIDEEEFENLRINNCIPKIGKELIEKVLTLETNIWKY--A 207
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
ISL KGCY+GQE ++R+ R R M+ D++ +L +D +G + V K
Sbjct: 208 ISLNKGCYVGQEAIARVYFRG-KPPRVMVKFSFDNILNENEKVLLNDKPVGFITSVNIKD 266
Query: 238 ALAIARI 244
AI I
Sbjct: 267 KTAIGFI 273
>gi|113969061|ref|YP_732854.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-4]
gi|113883745|gb|ABI37797.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-4]
Length = 318
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 27/230 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+ D
Sbjct: 24 LSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ-DVL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSF--IDERFS 121
++ + + + + +L Y + S + +L E F F I E +
Sbjct: 83 LMLMPKDTLELDLPQLQKYAVFSKATLSNASDEWTLLGVAGEQAVPFVTQHFGEITEELT 142
Query: 122 I---------ADVLL------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS--- 163
+ AD + T E D + L I G PN PS
Sbjct: 143 LVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGY--PN--LAPSHAN 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILQGTTAL 248
>gi|257386337|ref|YP_003176110.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
gi|257168644|gb|ACV46403.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
Length = 362
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ L NG+ KGC++GQEVVSR+ +R KR + +T +P SG+ + DD +G +
Sbjct: 244 VVGLANGVDFEKGCFVGQEVVSRVHNRGRPSKRLVGLT-CGAVPESGAAVFVDDASVGAV 302
Query: 231 GVVVG----KKALAIARID 245
V ++ +A+AR+D
Sbjct: 303 TRAVESPTREEPIALARVD 321
>gi|293605094|ref|ZP_06687486.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553]
gi|292816497|gb|EFF75586.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553]
Length = 332
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 45/237 (18%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---EDTFILE--ID 70
G A+ FL +T DV LP AR + T +G++L ++ + +D L +
Sbjct: 31 GADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRAAPGADDAPQLYGLVR 90
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFSI------ 122
R ++L+ +L + LR+ V + +N GV S + + R
Sbjct: 91 RDLSEALLKRLSMFVLRAKVKLAATGLNVAGVQASAQEAAALEAVTGALPRTPWQRVDLP 150
Query: 123 ---------ADVLLHRTW-GHNEKIASDIKTYHELRINHG--------------IVDPNT 158
AD L W +E++ L + I
Sbjct: 151 SGTWIAAPSADARLRWWWIASDEQLQQSSALAGVLSLAPAAHWQVADLAAGIPWIATATQ 210
Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D F+P T+ ++L+ G+S TKGCY GQEVV+R +R +++R + GT + P
Sbjct: 211 DVFIPQTVN-----LELVEGVSFTKGCYPGQEVVARSHYRGTVKRR--MAYGTVEQP 260
>gi|59712704|ref|YP_205480.1| folate-dependent regulatory protein [Vibrio fischeri ES114]
gi|75353458|sp|Q5E304|YGFZ_VIBF1 RecName: Full=tRNA-modifying protein ygfZ
gi|59480805|gb|AAW86592.1| predicted folate-dependent regulatory protein [Vibrio fischeri
ES114]
Length = 318
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 24/233 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +T DV++L +GK+ F + D +
Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFH-HNDGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFIDER 119
L +S ++ + ++ Y + S V I I L W +HT SN++ +
Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDEILLGFTGDKALEWINQHTDSNANVRVSK 143
Query: 120 FS----IADV--LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDF-LPST 164
F ++D LL T E++ S D + I H + P D L +
Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHAL--PQIDAPLCNE 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
P + +NGIS KGCY GQE V+R ++R I ++ +++G + P
Sbjct: 202 HIPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGLSEARPCA 254
>gi|238796535|ref|ZP_04640042.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969]
gi|238719513|gb|EEQ11322.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969]
Length = 330
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 38/248 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104
E +E RS D+ + +L Y + S V+I QP + GV +
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAAQPETVLLGVAGAQARVALAGLFAELP 138
Query: 105 NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ EH T + S ERF + A L+ + H + ++ K + L I
Sbjct: 139 SAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVDKLADHAQ--LNNSKQWLALDIE 196
Query: 151 HG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G I+D +T + P + LNGIS +KGCY GQE+V+R ++R ++ +
Sbjct: 197 AGFPIIDADTS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLA 253
Query: 209 GTDDLPPS 216
G PS
Sbjct: 254 GHASRVPS 261
>gi|304411119|ref|ZP_07392735.1| folate-binding protein YgfZ [Shewanella baltica OS183]
gi|307301758|ref|ZP_07581516.1| folate-binding protein YgfZ [Shewanella baltica BA175]
gi|304350654|gb|EFM15056.1| folate-binding protein YgfZ [Shewanella baltica OS183]
gi|306913796|gb|EFN44217.1| folate-binding protein YgfZ [Shewanella baltica BA175]
Length = 320
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 42/251 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L + + + + +L Y + S + +L E S F+ E F
Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SQFVSEHFGD--- 136
Query: 126 LLHRTWGHNEKIA----------------------------SDIKTYHELRINHGIVDPN 157
+H+ + E A D + L I G PN
Sbjct: 137 -IHQEFTPIEHGAILKDADRFILMLAPEAAAALVAKSKLSVFDASAWQALEITAGY--PN 193
Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-- 214
S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L
Sbjct: 194 LAASHASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQIS 253
Query: 215 -PSGSPILTDD 224
SG I +D
Sbjct: 254 LESGLEIAMED 264
>gi|302036423|ref|YP_003796745.1| putative aminomethyltransferase [Candidatus Nitrospira defluvii]
gi|300604487|emb|CBK40819.1| putative Aminomethyltransferase [Candidatus Nitrospira defluvii]
Length = 363
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 56/277 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-------------- 51
LS++ I+V G I +LQ+II+ D+L L R S+ LT +GK+
Sbjct: 48 LSHRGKIRVTGDDRIKWLQSIISNDILPLQPGQGRYSSFLTHKGKMLGYFRVYVSADAVW 107
Query: 52 ------------------LLYFLISKIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNV 90
LLY +K+E E +L + K + ++R+
Sbjct: 108 VEDVGEVGDATFQALRKFLLYGTKAKMENCGESWGLLLVSGPKSAEAVAAAFGIEVRALQ 167
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIASD------- 140
++ P + Q ++ F + AD + W N+ + S
Sbjct: 168 LLHTLP---ATIDGQQALILRTEETGEQDFEVLLPADAV-PAAW--NQLMTSGAPFGIKP 221
Query: 141 --IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ-HR 197
+ LRI G+ D L I P +A ++ SL+KGCY GQEVV+R+ +
Sbjct: 222 VGTQARELLRIEAGLPKAGPD-LNEEIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYG 279
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
N+ R +I +PP+GS + + D E+G + V
Sbjct: 280 NVRRHLVGLIIQDKAVPPAGSKLFSGDREVGWVSSAV 316
>gi|255318647|ref|ZP_05359878.1| glycine cleavage T protein [Acinetobacter radioresistens SK82]
gi|262379127|ref|ZP_06072283.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255304329|gb|EET83515.1| glycine cleavage T protein [Acinetobacter radioresistens SK82]
gi|262298584|gb|EEY86497.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 239
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +TADV L R +AI +G+I +S+ + + F + + + + +
Sbjct: 13 GVDAQKFLQGQVTADVERLDSNY-RYTAICDLKGRIHFGLWLSRQDAENFSIVVTQDQSE 71
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
+ Y S + E I V S + T RFS D
Sbjct: 72 EFAKHIRKYGAFSKMTFE--DIGAVFPSMDNALT---------RFSSED----------- 109
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+D+ + I G T P + + G+ KGCY+GQE+V+R+
Sbjct: 110 ---TDLNAWQLQAIEQGQA-WITSLTEHEFQPQELRLHQRGGVHYDKGCYLGQEIVARLW 165
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAIAR 243
+ + ++ G+ P + +L DD+E + ++ V G KAL +A+
Sbjct: 166 FKAKPKHWLHLVQGSGTAPAPAT-LLHDDVEVVNSIAVENGYKALVVAK 213
>gi|241663067|ref|YP_002981427.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
gi|240865094|gb|ACS62755.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
Length = 346
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 89/237 (37%), Gaps = 54/237 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+
Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97
Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103
+ +L +L + LR+ V+ E +N V
Sbjct: 98 AIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPEAADALREAGAVLPEPDTVNAVA-- 155
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150
Q T R A W H E KT + L +
Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQHAWKTLSSRLSLVGTEVWDWLSLQ 214
Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ + F+P + ++LL G+ KGCY GQEVV+R Q+R +++R
Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEVVARSQYRGTLKRR 266
>gi|51597485|ref|YP_071676.1| global regulator [Yersinia pseudotuberculosis IP 32953]
gi|153946923|ref|YP_001399856.1| global regulator [Yersinia pseudotuberculosis IP 31758]
gi|81638623|sp|Q666S2|YGFZ_YERPS RecName: Full=tRNA-modifying protein ygfZ
gi|166979590|sp|A7FF28|YGFZ_YERP3 RecName: Full=tRNA-modifying protein ygfZ
gi|51590767|emb|CAH22412.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|152958418|gb|ABS45879.1| putative aminomethyltransferase [Yersinia pseudotuberculosis IP
31758]
Length = 330
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 40/257 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104
E +E RS D+ + +L Y + S V+I QP + GV S
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 105 NQEH---TFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ EH NS+ + ERF + A L+ + G + +D K + L I
Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQ--FNDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGF--PIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSPILTDDIE 226
S P +D+E
Sbjct: 255 N----ASRVPAAGEDLE 267
>gi|152999373|ref|YP_001365054.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
gi|151363991|gb|ABS06991.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
Length = 320
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+L + + + + +L Y + S + +L E S F+ E F
Sbjct: 84 ML-MPKDTIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQA---SLFVSEHFGDIHQ 139
Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160
AD +L+ +A D + L I G PN
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGY--PNLAAS 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217
S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257
Query: 218 SPILTDD 224
I +D
Sbjct: 258 LEIAMED 264
>gi|37521041|ref|NP_924418.1| hypothetical protein glr1472 [Gloeobacter violaceus PCC 7421]
gi|35212037|dbj|BAC89413.1| glr1472 [Gloeobacter violaceus PCC 7421]
Length = 288
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISK 59
+ +LS++ + V GK A +LQ ++T ++ TL P K G A+LT QGK++ +F + +
Sbjct: 3 LEGYFLSDRELLSVRGKDAADYLQRVLTCNLKTLQPGKFIPG-ALLTGQGKLVAFFDLYQ 61
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--ID 117
+ + L + ++L +L Y +V++E P +VL E S F I
Sbjct: 62 QADGGYTLAVPSGCAEALAARLERYVFSEDVVLE--PREAIVL----ELLSSAPPFEPIP 115
Query: 118 ERFSIADVLLHRTWGHNEKIAS-------------------DIKTYHELRINHGIVDPNT 158
E D L +A + + + RI G+ +
Sbjct: 116 EPGRYRDFALDGLPARLSTLAPGHYRLELVRMPSEFAPAPLEAERFEAWRIEQGLPAWDK 175
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ L + P + +D IS KGCY GQEV+SR
Sbjct: 176 E-LNDNLIPLNLGID--GAISHDKGCYTGQEVISR 207
>gi|238787327|ref|ZP_04631126.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641]
gi|238724589|gb|EEQ16230.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641]
Length = 327
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEEDT 64
L + + + + G + +LQ +TAD+ LP A +GK+ L + E
Sbjct: 25 LDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYRGEGLA 84
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------------NQE 107
FI RS D+ + +L Y + S V+I QP + V+L N E
Sbjct: 85 FIER--RSVLDNQLSELKKYAVFSKVVISAQP-DAVLLGVAGDQAQAALTPIFAELPNAE 141
Query: 108 H--------TFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRINHG-- 152
H T + S ERF I + EK+A ++ K + L I G
Sbjct: 142 HPVIQQGNSTLLHFSLPTERFLIV-TDSEQAQQIVEKLADSAQLNNSKQWLALDIEAGFP 200
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I+D ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G +
Sbjct: 201 IIDADSS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGNAN 257
Query: 213 LPPSG 217
P+
Sbjct: 258 RVPAA 262
>gi|167622662|ref|YP_001672956.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
halifaxensis HAW-EB4]
gi|167352684|gb|ABZ75297.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
halifaxensis HAW-EB4]
Length = 323
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 25/264 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I V G+ F+ +T D+ +L R A P+GK+L F + + DT
Sbjct: 24 LTHLGLISVTGEQGRSFIHGQVTTDISSLESDQWRWGAHCDPKGKMLASFR-TFAKGDTL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSF---IDERF 120
L + + + +L Y + S + + ++L + Q T+ + F DE
Sbjct: 83 FLMMPKETLALDLPQLQKYAVFSKAELSDASDHWLLLGVAGEQAKTWLTAQFGELTDELT 142
Query: 121 SIADVLLHRTWG------HNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164
I + ++ G ++ AS D + L I G PN
Sbjct: 143 LIDNGMIIHDAGRFILAIEQDQAASLISAIEQPIYDATAWQALEIAAGY--PNLGANHQG 200
Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
F P + +NGIS KGCY+GQE ++R+++R ++ I++GT P + L
Sbjct: 201 QFVPQMCNVQAVNGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSTPLTADSQLEI 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKV 247
+E G G A+ R D+V
Sbjct: 261 ALEDGEGFRRAGTIIEAVQRGDQV 284
>gi|121607991|ref|YP_995798.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
gi|121552631|gb|ABM56780.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
Length = 303
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 25/229 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+V G+ A FL + +T D +L + AR +A L+ +G++ F I D +
Sbjct: 11 LSHLGVIRVAGEDAGAFLHSQLTQDFSSLDMRQARLAAFLSAKGRMQASF-IGLRRPDEW 69
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L R + + +L + LR+ + + + + + + +S AD+
Sbjct: 70 LLLCSRDLLPATLARLSMFVLRAKARLTDASADFALYGLAGDTLAAVAGGAQPAWSKADI 129
Query: 126 ----LLHRTWGHNE-----------------KIASDIKTYHELRINHGIVDPNTDFLPST 164
L+H N+ +A+ + + E + G+ ++ +
Sbjct: 130 GAASLVHLYPAANQPRALWVAPAGDPPPAGPALATALWLWSE--VASGVATLSSP-VAQV 186
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + + G+S KGCY GQEVV+R Q R +++R I D+
Sbjct: 187 FVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYIAHAEADI 235
>gi|262377511|ref|ZP_06070733.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262307567|gb|EEY88708.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 241
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 40/241 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ + G A FLQ +T + TL R +AI + +G+I + KI ++F +
Sbjct: 8 TLFSLNGVDAQKFLQGQVTLNTETLAENQTRYTAICSLKGRIQFGLWLKKISPESFEIVS 67
Query: 70 DRSKRDSLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ L + + F K++ ++ + P ING+ HT D
Sbjct: 68 TEDQATELTNHIKKFGAFSKMKLELVGPVYPVINGI-------HT--------------D 106
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKG 183
+ T D+ + + I G +T+F P + + GI KG
Sbjct: 107 FVATET---------DVTMWEQQAIESG--QAWIQAATATLFQPQELRLHQREGIHYDKG 155
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI-GTLGVVVGKKALAIA 242
CY+GQEV++R+ + + ++ GT P + L +D+EI ++ + G KAL +A
Sbjct: 156 CYLGQEVIARLWFKAKPKHWLHLVQGTGAAPDVATK-LNNDVEIVNSIAIENGYKALVVA 214
Query: 243 R 243
+
Sbjct: 215 K 215
>gi|167521794|ref|XP_001745235.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776193|gb|EDQ89813.1| predicted protein [Monosiga brevicollis MX1]
Length = 364
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 53/237 (22%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARG-------------------- 41
+ +++ + V G A+ FLQ + T D+L P+++A
Sbjct: 60 VPHRAVLAVRGPEALTFLQGLTTQDLLPQEPEEPFELAEDDADTADTAADSSTAAATHPT 119
Query: 42 ----SAILTPQGKIL---LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI 94
+ L +G+IL L + E F E+D L L +KLR+ V +
Sbjct: 120 KPLHTMFLHAKGRILCDALAYPTLPTEPRGFYFEVDADMLAPLHKHLRSFKLRTKVSFD- 178
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHG 152
+ D ++A +++ T E + S D Y LR+ G
Sbjct: 179 --------------ALAPDVIGDPGRTLAALIVPCTL---EPVLSNDDGSIYAYLRLALG 221
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207
+ + D + + P +A ++ NG+S KGCY+GQE+ +R + ++RKR PM I
Sbjct: 222 LSEGPQDHIDNKSLPLEANIEHWNGVSFKKGCYLGQELTARTHYSGMLRKRLLPMRI 278
>gi|255717402|ref|XP_002554982.1| KLTH0F18326p [Lachancea thermotolerans]
gi|238936365|emb|CAR24545.1| KLTH0F18326p [Lachancea thermotolerans]
Length = 480
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R G++D DF P T+ P + D L N +S KGCY+GQE+ +R I+RKR
Sbjct: 300 RFESGLIDGLEDFRPETLLPLELNFDFLPNAVSFDKGCYVGQELTARTFSTGILRKR 356
>gi|119943855|ref|YP_941535.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
gi|119862459|gb|ABM01936.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
Length = 325
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + V G+ I FLQ +T D+ L +A PQGK+ F + + D
Sbjct: 21 LTSWDLLSVTGEDRITFLQGQLTCDLTILKPGEQTLAAQCNPQGKVWSIFRVV-VLNDRI 79
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFIDER 119
+L +S + +L Y S V I ++ + G + N F+ S+ +E
Sbjct: 80 LLIQPKSVTAKQLPELQKYATFSKVEIKKETEYQLLGLAGCKSAANIAKNFNISATHEES 139
Query: 120 FSIAD---VLLHRTW-----------GHNEKIASDIKT---------YHELRINHGI--V 154
+ D V++ + + ++ D+K ++ + I GI +
Sbjct: 140 HLLDDDQGVIIKQPYPSLRYLMIVKNQQATQLTEDLKDQASVYDDSLWNAMNIAAGIAFI 199
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDL 213
+ T L P + LNGIS TKGCYIGQE ++R ++R ++ I+TG +
Sbjct: 200 EEETSGL---FIPQMLNLQALNGISFTKGCYIGQETIARTKYRGANKRALFILTGRATEA 256
Query: 214 PPSGSPI 220
P +G +
Sbjct: 257 PKAGQNV 263
>gi|238763222|ref|ZP_04624187.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638]
gi|238698495|gb|EEP91247.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638]
Length = 330
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59
++ + L + + + + G + +LQ +TAD+ LP A +GK+ L +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------INGVVLSW 104
E FI R+ D+ + +L Y + S V+I QP + G+
Sbjct: 80 GEGLAFIER--RNVLDNQLRELKKYAVFSKVVIAAQPDAALLGVAGAQAKTALAGIFAEL 137
Query: 105 -NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149
+ EH T + S ERF + A L+ + ++ +D K + L I
Sbjct: 138 PDAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVEKL--SDQAQLNDSKQWLALDI 195
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 196 EAGFPIIDTDN-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSPILTDDIE 226
+ S P +D+E
Sbjct: 255 S----ASRVPTAGEDLE 267
>gi|120612067|ref|YP_971745.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
gi|120590531|gb|ABM33971.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
Length = 304
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 24/219 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ ++ +
Sbjct: 11 LNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRVGDAEV 70
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQEHT 109
+L R ++ +L + LR+ + + + W+++ T
Sbjct: 71 LLVCSRDVLAPVLKRLSMFVLRAKARLTDATADFALWGLAGDAVAAVAGEALPPWSRQDT 130
Query: 110 FSNSSF-IDERFSIADVLLHRTWGH----NEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ + A LL + G +A + + E + G+ T L
Sbjct: 131 PQGTVVHLYPGAGQARALLAQPTGQPAPSGPALAPGLWEWGE--VQSGVAT-LTAPLVEL 187
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P + + G++ KGCY GQEVV+R Q R +++R
Sbjct: 188 FVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 226
>gi|212637154|ref|YP_002313679.1| glycine cleavage T protein [Shewanella piezotolerans WP3]
gi|212558638|gb|ACJ31092.1| Glycine cleavage T protein (aminomethyl transferase) [Shewanella
piezotolerans WP3]
Length = 340
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 40/259 (15%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------L 56
+LS+ + V G+ F+ +T D+ +L + R A P+GK+L F L
Sbjct: 40 HLSHLGLMSVTGEQGRSFIHGQVTTDISSLEAEQWRWGAHCDPKGKMLATFRTFAKGDTL 99
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEH 108
+ + T L++ + ++ ++ K + +I + SW N E
Sbjct: 100 FMLMPKQTLALDLPQLQKYAVFSKAELTDVSEQWLI-LGVAGEQAASWLTAKFGELNAEL 158
Query: 109 TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDF 160
T ++ + ++RF V++ ++ + +D+ + L G PN
Sbjct: 159 TLIDNGMVIQDNDRFI---VVIEQSKVDTANLLADVSLFDATAWQALETLAGY--PNIGA 213
Query: 161 LPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
S F P + ++GIS KGCY+GQE ++R+++R ++ I++GT S
Sbjct: 214 AHSAQFVPQMCNLQAIDGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTV------SA 267
Query: 220 ILTDDIEIGTLGVVVGKKA 238
+LTD+ L + +G+ A
Sbjct: 268 VLTDE---SVLEIALGEGA 283
>gi|157870281|ref|XP_001683691.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68126757|emb|CAJ05212.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 368
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 125/348 (35%), Gaps = 84/348 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL---YFLISKIEE 62
L ++ ++V G A FLQ I T D+ L + L G++L + ++ E
Sbjct: 11 LPSRRILRVRGTDAHDFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQVHE 70
Query: 63 DTFILEIDRSKRDS--LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------- 111
+ +D +R + L+D L K+R V I+ VVL+ +E +
Sbjct: 71 GQASILVDVHERSATELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSADAQRSRDSAS 130
Query: 112 ---------------------NSSFIDER------------------------FSIADVL 126
F+D R F + +
Sbjct: 131 GCDARESSVTSLSPETLEERHTECFLDPRNDALFPRPPPPSSSSPPAAVTSPSFCLRKCV 190
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ TW S +Y L + GI + F + P + +D L G+S KGCY+
Sbjct: 191 VPATWA---PPLSSPDSYTTLLYSRGIGEGPDVFKCNKSLPFEGNLDFLKGVSFHKGCYV 247
Query: 187 GQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDD--------------------I 225
GQE+ R + RKR + + G ++ P + I+TD+
Sbjct: 248 GQELTHRTHVMLVTRKRTVPLHFGPANVDPPAAGIITDEGAVTKTWPVEVGEPLYSAARE 307
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
+IG + V G+ + + R+ VD A L + G V+ P W+
Sbjct: 308 KIGEVTGVCGQVGIGLFRLRYVDKATHTVPGLQLKDGTPVQTHLPDWW 355
>gi|299768868|ref|YP_003730894.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1]
gi|298698956|gb|ADI89521.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1]
Length = 240
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + KI ++F + + + + +
Sbjct: 13 GIDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINPESFEIVVAQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ + S + + Q G V N + FS + + ++ + W
Sbjct: 73 EFAKHIKKFGAFSKMTLSEQ---GAVFPKFVNHQTEFSTTETDISEWQKQAIMTGQAWIT 129
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 130 Q-------ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT + P S + L +DIE+ G L +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDIEVVNSIANDQGYLALVVAKPA 216
>gi|237755923|ref|ZP_04584514.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691922|gb|EEP60939.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 302
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 29/247 (11%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FLQ I+T ++ L K + +L +G + F + K + + +IL+ + RD + +KL
Sbjct: 32 FLQGILTNNIAQLNDKEFNYNLMLDHKGSPIWDFYVFK-DNENYILDFE-CDRDEVFNKL 89
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFS--------IADVLLH--- 128
KL V E+ + + + F +F + ERF IA+ L
Sbjct: 90 KQLKLSYQVFFEVLELEHIYIFGEDSEKFIQQTFNEVPERFKYLKSENIYIANNPLRLGQ 149
Query: 129 ---RTWGHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+G+ E I S + T + LRIN+ I + L + P + +
Sbjct: 150 KGFDIFGNLESIKSSLPTDLKIDEGKFENLRINNCIPKIGKE-LVEKVLPLETNI-WKYA 207
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
ISL KGCY+GQE ++R+ R R M+ D+ +L +D +G + V K
Sbjct: 208 ISLNKGCYVGQEAIARVYFRG-KPPRVMVKFSFDNALDENEKVLLNDKPVGFITSVNIKD 266
Query: 238 ALAIARI 244
AI I
Sbjct: 267 KTAIGFI 273
>gi|218710580|ref|YP_002418201.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32]
gi|254814153|sp|B7VK90|YGFZ_VIBSL RecName: Full=tRNA-modifying protein ygfZ
gi|218323599|emb|CAV19849.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32]
Length = 323
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 45/238 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNGG 83
Query: 58 -------SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------QPINGVVLSW 104
S IE + ++EI + S +D + S+V+I + Q I+ + S
Sbjct: 84 YALMQPKSAIEVE--LVEIKKYAVFSKVD----IEQTSDVVIGVMGASADQYIDSISESQ 137
Query: 105 NQEHTFSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ S + + D R+++ + L+ + EK++ + YHE I+D
Sbjct: 138 GKVRVISGGTAVQVSDNRWALLVTQEATEALVSSS--TAEKVSEALWQYHE------ILD 189
Query: 156 PNTDFLPSTIFPH--DAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + H AL + + GIS +KGCY GQE V+R ++R + ++ I++GT
Sbjct: 190 AQPNLSKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGT 247
>gi|94500782|ref|ZP_01307311.1| aminomethyl transferase, putative [Oceanobacter sp. RED65]
gi|94427104|gb|EAT12085.1| aminomethyl transferase, putative [Oceanobacter sp. RED65]
Length = 294
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 40/256 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISK 59
+ S +++ ++ + G + F+Q T D+ ++ RG A +G+++ F +S
Sbjct: 4 LQSYSINDCDYLIIQGPDSAKFMQGQFTCDINQATSHQFLRG-ACCNAKGRMVASFDLSL 62
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFID 117
I++D ++L + + D L + L Y + I V +N H T +NS +
Sbjct: 63 IDKDQYLLVMAKGLADILQNHLKKYAVFFKAEI-------VKKQFNAYHFDTITNSD-LT 114
Query: 118 ERFS---IADVLLHRTWGHNE-----KIASDI-------------KTYHELRINHGI--V 154
E FS + L+ R G N ++++D + + RI G+ V
Sbjct: 115 EDFSQSRTGERLIKR-QGFNAGFDVIQLSADASGIDATVNVKQPSQDVNLARIQAGLARV 173
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
P T + P + L NG+S KGCY GQE+V+R+Q+ + KR +
Sbjct: 174 TPET---SEELIPQMLNLQLTNGVSFKKGCYTGQEIVARMQYLGKL-KRHCYRVAFNQAA 229
Query: 215 PSGSPILTDDIEIGTL 230
G + D IGTL
Sbjct: 230 EVGDSLFAGDKSIGTL 245
>gi|300704089|ref|YP_003745691.1| aminomethyl transferase [Ralstonia solanacearum CFBP2957]
gi|299071752|emb|CBJ43076.1| putative aminomethyl transferase [Ralstonia solanacearum CFBP2957]
Length = 346
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 116/297 (39%), Gaps = 61/297 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL + +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLDQARLAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GVVLS---- 103
L+ D+ +L +L + LR+ +++P++ G VL
Sbjct: 93 LQTDKLIAPALTRRLTMFVLRAKA--KLRPMDEFIAITVAGPDAADALREAGAVLPDTEA 150
Query: 104 ----WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT------------YHE 146
Q T R A W H E KT +
Sbjct: 151 VYTVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDW 210
Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
L + G+ + F+P + ++L+ G+ KGCY GQEVV+R Q+R +++
Sbjct: 211 LGLQAGVPSITLSTQEQFVPQMVN-----LELVGGVDFRKGCYPGQEVVARSQYRGTLKR 265
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI 251
R M + +G+ + ++ G+VV G L ++D +D AI
Sbjct: 266 R-MQRAHVNAPTSAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSAI 321
>gi|52424309|ref|YP_087446.1| hypothetical protein MS0254 [Mannheimia succiniciproducens MBEL55E]
gi|52306361|gb|AAU36861.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 277
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++L+ I++ G + FLQ +T DV L + +A P+GK+ F + ++ ++
Sbjct: 5 IHLTQYKLIELTGVDSEKFLQGQLTCDVTKLKTGDSTLTAHCDPKGKVSSVFRLIRVAQE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERF 120
F L + +D+L Y + S V E+Q + GV+ FS S ++
Sbjct: 65 QFYLLFRTDLLPAGLDQLKKYAVFSKVAFAEPEVQ-LAGVI--GENCGQFSASFVVNS-- 119
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGI 178
A +L++ +++ E++ + I+ T +F+P + L + +
Sbjct: 120 GNAAILINPAERLEFNASAEAWDCVEIQRGYPILSAKTQNEFIPQAL----NLQCIEQAV 175
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
S KGCYIGQE V+R ++R KR M I
Sbjct: 176 SFQKGCYIGQETVARAKYRG-TNKRAMFI 203
>gi|294142438|ref|YP_003558416.1| glycine cleavage system T protein [Shewanella violacea DSS12]
gi|293328907|dbj|BAJ03638.1| glycine cleavage system T protein, putative [Shewanella violacea
DSS12]
Length = 326
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 3 SVYLSNQS---FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
S++ SN S + V G+ F+ +T D+ +L R A P+GK+L F
Sbjct: 18 SLFFSNLSHLGLMSVTGEQGRSFIHGQVTTDISSLQSDQWRWGAHCDPKGKMLASFRTFS 77
Query: 60 IEEDTFI--------LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+E+ F+ L++ + + ++ K + N ++ + +W E S
Sbjct: 78 LEDTLFMMMPADILALDLPQLAKYAVFSKADLVDVTDNFLL-LGVAGEQAKTWIDERFGS 136
Query: 112 -NSSFIDERFSIAD------------VLLHRTWGH------NEKIASDIKTYHELRINHG 152
N++ ID+ ++ +++ T +++I D + L I G
Sbjct: 137 DNNTSIDKEVTVISGGLLLKDNDRFIIMMEETAAALLLTSISQEIV-DATAWQALEIQSG 195
Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
PN + F P + +NGIS KGCY+GQE ++R+++R ++ I++GT
Sbjct: 196 Y--PNLAASHQSQFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGT 252
>gi|16331555|ref|NP_442283.1| hypothetical protein slr0635 [Synechocystis sp. PCC 6803]
gi|1001622|dbj|BAA10353.1| slr0635 [Synechocystis sp. PCC 6803]
Length = 312
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L+++ WGH I D + LRI G + L P +A L IS TKGCY
Sbjct: 167 LVNQLWGHLPLINPD--QWESLRIYQGRPQAGKE-LTEDYNPLEA--GLWRAISFTKGCY 221
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
IGQE ++R+ +++R IT D +G+ I + ++G L V G L +
Sbjct: 222 IGQETIARLNTYQGVKQRLWRIT-LDRQAEAGTVITLEGQKVGILTSVKGLTGLGYLKTK 280
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHWY 272
VD + + + V H Y
Sbjct: 281 LVDQGMTVQLGEAIATVEKPPYLSHQY 307
>gi|294669214|ref|ZP_06734294.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308846|gb|EFE50089.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 323
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 31/240 (12%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
I+V G+ FL ++ + L A + TP+G+++ L+ ED +L
Sbjct: 46 GLIRVSGEDRASFLHGQLSNHIEGLAEGEACYATYNTPKGRVIANMLVFNRGEDL-LLLT 104
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFSIADVLL 127
++L +L + LR+ + E P G N+ + + F+++D L+
Sbjct: 105 AADLVEALCKRLRMFVLRAKAVFEPLPGYGAAGRLNEGAPALPAAEPHLSFPFAVSDGLI 164
Query: 128 HRTWGHN--------------EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
T H + A + HE+R + + T +
Sbjct: 165 ECTLPHGGILLAGEKDTLPAYDAEAENAWQLHEIRSGYPWISEATK--------ESCVAQ 216
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+LN G+ KGCY GQE+++R Q+R +++ ++ G+ L +G +L D E G
Sbjct: 217 MLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLLGS-SLEAAGIAVLQDGAEAG 275
>gi|323336892|gb|EGA78150.1| Iba57p [Saccharomyces cerevisiae Vin13]
Length = 516
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
>gi|189220194|ref|YP_001940834.1| aminomethyltransferase [Methylacidiphilum infernorum V4]
gi|189187052|gb|ACD84237.1| Predicted aminomethyltransferase [Methylacidiphilum infernorum V4]
Length = 398
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS Q+ ++ G+ I +L + AD+ +LP A +A L +G++ I+ E F
Sbjct: 127 LSGQAIWRISGRDRIKYLNGQLPADIASLPPGCALQTAALNRKGRMDCELWIAHHPEFLF 186
Query: 66 I---LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------NSSF 115
+ EI+ + L L+ K + I+ + G + H FS + F
Sbjct: 187 VDCPKEIEEATEKRLTSFLVADK------VTIEKLGGQFYLY---HYFSPDPPKGFSFCF 237
Query: 116 IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
++RF I DV R LR+ + I + +T+ AL
Sbjct: 238 QNKRFGIPGWDVWSERRLEDFGCPEVPPGVQESLRLENMIPRWGKELTSNTL----ALEA 293
Query: 174 LL--NGISLTKGCYIGQEVVSRIQH 196
L + IS TKGCY+GQE++SRI H
Sbjct: 294 FLSKDSISFTKGCYVGQEIISRIHH 318
>gi|123443583|ref|YP_001007556.1| putative global regulator [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166979589|sp|A1JPM8|YGFZ_YERE8 RecName: Full=tRNA-modifying protein ygfZ
gi|122090544|emb|CAL13413.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 330
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 42/250 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59
++ + L + + + + G + +LQ +TAD+ LP A +GK+ L +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104
E FI RS D+ + +L Y + S V+I QP + V+L
Sbjct: 80 GEGLAFIER--RSVLDNQLSELKKYAVFSKVVIAAQP-DAVLLGVAGTQAKAVLAEVFAE 136
Query: 105 --NQEH--------TFSNSSFIDERFSIADVLLHRTWGHN---EKIA-----SDIKTYHE 146
N +H T S ERF +L+ T EK+A ++ K +
Sbjct: 137 LPNADHPVVQQGDSTLLYFSLPAERF----LLVTDTEQAQQLVEKLADRAQFNNSKQWLA 192
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
L I G +TD + P + LNGIS +KGCY GQE+V+R ++R ++
Sbjct: 193 LDIEAGFPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYW 251
Query: 207 ITGTDDLPPS 216
+ G+ + P+
Sbjct: 252 LAGSANRAPA 261
>gi|207343770|gb|EDZ71127.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 241
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 61 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 120
>gi|332528358|ref|ZP_08404358.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella
gracilis ATCC 19624]
gi|332042229|gb|EGI78555.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella
gracilis ATCC 19624]
Length = 317
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 42/245 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++ G+ A FLQ+ +T D L AR +A + QG++ F+ K+ D +L +
Sbjct: 17 LRASGEEATKFLQSQLTNDFALLGANQARFAAFCSAQGRMQASFIGVKLAADDILLVCSQ 76
Query: 72 SKRDSLIDKLLFYKLRSNVIIE---------------IQ---PINGVVLS-WNQEHTFSN 112
+ + +L + LR+ V + +Q P G + + W +
Sbjct: 77 DLLERTLKRLSMFVLRAKVKLSDATASFALYGLAGDAVQAHTPGAGALPAPWTCQSVNDE 136
Query: 113 SSFI--------DERFSIADVLLHRTWGHNEK--IASDIKTYHELRINHGIVDPNT--DF 160
+ I D+R + A L T E +A + + E+ +V T F
Sbjct: 137 TRLIHLHPAVKGDDRAARALWLAPATTPAPEATALAHEDWLWGEVLSGVAMVSAPTFEAF 196
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR------PMIITGTDDLP 214
+P + + + GI+ KGCY GQEVV+R Q R I++R P+ ++ D+
Sbjct: 197 VPQMLN-----YESIEGINFKKGCYPGQEVVARSQFRGAIKRRALRVRSPVALSAGQDIF 251
Query: 215 PSGSP 219
+ +P
Sbjct: 252 DAAAP 256
>gi|6322582|ref|NP_012656.1| Iba57p [Saccharomyces cerevisiae S288c]
gi|1352922|sp|P47158|CAF17_YEAST RecName: Full=Putative transferase CAF17, mitochondrial; AltName:
Full=57 kDa iron-sulfur cluster assembly factor for
biotin synthase- and aconitase-like mitochondrial
proteins; AltName: Full=CCR4-associated factor 17;
Flags: Precursor
gi|1015847|emb|CAA89653.1| CAF17 [Saccharomyces cerevisiae]
gi|151945187|gb|EDN63438.1| ccr4 associated factor [Saccharomyces cerevisiae YJM789]
gi|190409594|gb|EDV12859.1| hypothetical protein SCRG_03773 [Saccharomyces cerevisiae RM11-1a]
gi|256273115|gb|EEU08070.1| Iba57p [Saccharomyces cerevisiae JAY291]
gi|259147585|emb|CAY80836.1| Iba57p [Saccharomyces cerevisiae EC1118]
gi|285813009|tpg|DAA08907.1| TPA: Iba57p [Saccharomyces cerevisiae S288c]
Length = 497
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
>gi|323347833|gb|EGA82095.1| Iba57p [Saccharomyces cerevisiae Lalvin QA23]
Length = 497
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
>gi|254581046|ref|XP_002496508.1| ZYRO0D01738p [Zygosaccharomyces rouxii]
gi|238939400|emb|CAR27575.1| ZYRO0D01738p [Zygosaccharomyces rouxii]
Length = 451
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRN 198
D + LR G VD D+ ++ P + D L N +S KGCYIGQE+ +R
Sbjct: 273 DPAFFRRLRFEQGYVDSVQDYTAESLLPLELNFDFLPNAVSADKGCYIGQELTARTFATG 332
Query: 199 IIRKR--PMIITGTDDLP-PSG 217
I+RKR P+ + ++ P P G
Sbjct: 333 ILRKRLVPVTLFNPENYPLPQG 354
>gi|225022191|ref|ZP_03711383.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
gi|224945124|gb|EEG26333.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
Length = 335
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K++ D F
Sbjct: 26 SHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVK-DAFY 84
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTFSNS 113
L+I +SL+D L S V I E+ + G +
Sbjct: 85 LDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFGAWVRH 144
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD--AL 171
R ++ DV E + + Y R+ G+ + + D +I PH+ AL
Sbjct: 145 DVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDLDDKSI-PHEVPAL 201
Query: 172 M---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILT 222
+ + + + L KGCY GQE V+R+++ + + P ++T LP G+PI+
Sbjct: 202 INRGERIAAVHLDKGCYRGQETVARVEN---LGRPPRLLTLVHLDGSAPTLPTPGTPIV- 257
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDH 249
+G G++ + RI V H
Sbjct: 258 -------MGPATGRQR-TVGRIGTVIH 276
>gi|113867578|ref|YP_726067.1| aminomethyltransferase [Ralstonia eutropha H16]
gi|113526354|emb|CAJ92699.1| Aminomethyltransferase [Ralstonia eutropha H16]
Length = 338
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+L+ G++ KGCY GQE+V+R Q+R +++R ++ G ++P + I + G+
Sbjct: 223 ELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGEGEVPAPAAEIYRPEDPGQPCGM 282
Query: 233 VV--------GKKALAIARIDKVDHAIKKGMA 256
+V G LA +ID A++ G A
Sbjct: 283 IVNAAPAPQGGWAGLAELKIDAAASALRLGSA 314
>gi|94986226|ref|YP_605590.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus
geothermalis DSM 11300]
gi|94556507|gb|ABF46421.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus
geothermalis DSM 11300]
Length = 298
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 50/273 (18%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S +++ G + F+Q +T D+ P A L +G+I + K E D + L +
Sbjct: 8 SALRLTGADRVDFVQGQMTNDLRGAPTPGMVACAFLNVRGQIEFFARAYKREGDVY-LHL 66
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPING-----------VVLSWN------QEHTFSN 112
D + + L +L Y + V E+Q + V WN Q +
Sbjct: 67 DAGQAEGLAARLRRYIIFDQV--ELQDLTAELRTVHVWGGQAVPGWNVGGGDAQVFELGS 124
Query: 113 SSFIDERFSI---ADVLLHRTWGHNEKIASDIKTYHEL--------RINHGIVDPNTDFL 161
++ + R + A + LH ++ + + EL R+ GI D D
Sbjct: 125 AAVLAGRVNRTGEAGLDLHYLARAEAEVLAALGG-EELPLAMLDLARVRAGIPDVTRDGF 183
Query: 162 PSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
T+ P + +D+ L+ IS KGCY+GQE+++R++ R R ++G
Sbjct: 184 VGTL-PQEVGLDVGGPLSAISYRKGCYVGQEIMARLEARGNARYHLARLSGE-------- 234
Query: 219 PILTDDIEIGTLGVVVGKK-----ALAIARIDK 246
L D E+ G VVG+ L++AR+ K
Sbjct: 235 -ALPDHAEVTREGRVVGQAGLCAGGLSLARLRK 266
>gi|91794306|ref|YP_563957.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
gi|91716308|gb|ABE56234.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
Length = 318
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+++ LS+ I++ G+ A F+ +T D++++ + R A P+GK++ F I +
Sbjct: 17 INAARLSHFGMIEITGEQAKTFINGQVTTDIISMTDEEWRWGAHCDPKGKMIASFRIFLL 76
Query: 61 EE--------DTFILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS 111
E T L++ + K+ ++ K + S I+ + V L +
Sbjct: 77 GERLLMLMPKSTLALDLAQLKKYAVFSKAELTDVSDSWAILGLWGEKSVDLMTQHFGELT 136
Query: 112 NSSFIDERFSI---------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
E+ +I A++ + + E +A K + L I G P
Sbjct: 137 QGLTATEQGAILKDNFGFMAILPQEQANIFIEQ--AKLELVAH--KAWQALEIAAGY--P 190
Query: 157 NTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
N D S + P + +NGIS TKGCY+GQE ++R+++R ++ I+ GT
Sbjct: 191 NIDSQHSGQYVPQMCNLQAVNGISFTKGCYMGQETIARMKYRGGNKRALYILEGT 245
>gi|88812335|ref|ZP_01127585.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus
mobilis Nb-231]
gi|88790342|gb|EAR21459.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus
mobilis Nb-231]
Length = 339
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A FL + ++ D+ +L AR +A +G+ L + + +
Sbjct: 40 LSDWGVIHVHGADAAAFLHSQLSNDIQSLDTANARLAAYCNAKGRALALLRVLRTDAG-L 98
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQEHT 109
+L ++ DSLI +L + LRS V ++ P+ ++ S ++
Sbjct: 99 LLFTHKALTDSLIRRLRMFVLRSKVTLDDVSEAIGVIGLVGAAARPPLQRLMGSLPEQVG 158
Query: 110 FSNSS---------FIDERFS--IADVLLHRTWGH--NEKIASDIKTYHELRINHGI--V 154
++ + +RF+ + LL W N + + L I GI +
Sbjct: 159 GVQNADEIRLIRLDCVPDRFALVVPGRLLPELWARLANTLPVVSSEAWRLLEIRAGIPTI 218
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDL 213
P T P ++ L GIS +KGCY GQEV++R+ + +++R + T T
Sbjct: 219 TPATQ---EAFVPQMLNLEPLQGISYSKGCYPGQEVIARMHYLGKLKRRMYRLHTQTATA 275
Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKA-------LAIARIDKVDH 249
P G + T E GT VV +A LA+ RI+ +
Sbjct: 276 PAPGEIVRAGTGGQEAGT--VVTAAQATPESCELLAVLRIELAEQ 318
>gi|163802948|ref|ZP_02196835.1| hypothetical protein 1103602000581_AND4_13813 [Vibrio sp. AND4]
gi|159173238|gb|EDP58066.1| hypothetical protein AND4_13813 [Vibrio sp. AND4]
Length = 322
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 39/233 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N S I + G P+LQ +T DV++L + A +GK+ F + D +
Sbjct: 26 LDNLSMITMVGDDKKPYLQGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFH-HNDGY 84
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIAD 124
+ +S D + ++ Y + S V IE N VVL E+ +FI I D
Sbjct: 85 AMLQPKSAIDVELKEIKKYAVFSKVTIE--ESNDVVLGVAGENA---EAFISSLNAEIGD 139
Query: 125 V----------------LLHRTWGHNEKIASDIK---TYHELRINHGI--------VDPN 157
V LL T + + + + T +EL I D
Sbjct: 140 VRAIKGGTAVKVAPSRWLLALTAESAQSLVASSQATLTTNELWTRFDIEAALPYVAADAQ 199
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
D +P + + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 200 NDHIPQALN-----LQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247
>gi|326331984|ref|ZP_08198269.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
gi|325950122|gb|EGD42177.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
Length = 319
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ +++ G + +L ++ + L + IL+PQG + +F S +++
Sbjct: 44 VDLSHRDVVRIAGPDRLTWLHSLTSQAFEGLAPGAWTSALILSPQGHVEHFF--SGVDDG 101
Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
T F+ + +L+D L K S+V + ++ V Q ++F + E+++
Sbjct: 102 TAFLAWTEPGAGSALVDYLERMKFWSDVTVTLETSQASVWRPAQGYSFVPRESL-EKYAA 160
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLN-- 176
A A + LRI G VD + +P+ + D+
Sbjct: 161 A-----------AGPACGFWAFEALRIERGEPRFGVDTDARTIPNEVGWVPGAADVAGPE 209
Query: 177 -GISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ +R ++ + G+++ LP +GS ++ + +G +G
Sbjct: 210 YAVHLDKGCYRGQETVARVHTLGRPPRRLVLLHLDGSENRLPVAGSELVFGEKTVGFVG 268
>gi|305680339|ref|ZP_07403147.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
gi|305659870|gb|EFM49369.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
Length = 363
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K++ D F
Sbjct: 54 SHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVK-DAFY 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTFSNS 113
L+I +SL+D L S V I E+ + G +
Sbjct: 113 LDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFGAWVRH 172
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD--AL 171
R ++ DV E + + Y R+ G+ + + D +I PH+ AL
Sbjct: 173 DVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDLDDKSI-PHEVPAL 229
Query: 172 M---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILT 222
+ + + + L KGCY GQE V+R+++ + + P ++T LP G+PI+
Sbjct: 230 INRGERIAAVHLDKGCYRGQETVARVEN---LGRPPRLLTLVHLDGSAPTLPTPGTPIV- 285
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDH 249
+G G++ + RI V H
Sbjct: 286 -------MGPATGRQR-TVGRIGTVIH 304
>gi|219871845|ref|YP_002476220.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Haemophilus parasuis SH0165]
gi|219692049|gb|ACL33272.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Haemophilus parasuis SH0165]
Length = 296
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V L+ I+V G A +LQ +T DV K+A G LT P+GK+ F +
Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVA----KLAVGEQSLTCHCDPKGKMSALFRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EI-QPING-----VVLSWNQEHTFS 111
+ + F L I + + +L Y + S V E+ Q + G ++ +N+ T
Sbjct: 72 RATAEQFFLIIQQDLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT-- 129
Query: 112 NSSFIDERFSIADVLLHRTWGH-NEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPH 168
+ ++DE A WG + D + ++ + I G+ + F + P
Sbjct: 130 -ACYLDEEPKRAIF-----WGDIVVETNGDSRLWNLIDIQQGVPLLYKANQF---ELIPQ 180
Query: 169 DALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSPI 220
+ LL+ IS TKGCYIGQE V+R ++R KR M + G +LP S I
Sbjct: 181 ATNLQLLDKAISFTKGCYIGQETVARAKYRG-ANKRAMFTFVGNVEGEIELPAIASSI 237
>gi|83748620|ref|ZP_00945639.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|207723529|ref|YP_002253928.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|207743121|ref|YP_002259513.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
gi|83724744|gb|EAP71903.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|206588730|emb|CAQ35693.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|206594518|emb|CAQ61445.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
Length = 346
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 52/241 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GVVLS---- 103
L+ D+ +L +L + LR+ +++P++ G VL
Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKA--KLRPMDEFIAITVAGPDAADALREAGAVLPDTEA 150
Query: 104 ----WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT------------YHE 146
Q T R A W H E KT +
Sbjct: 151 VYTVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDW 210
Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
L + G+ + F+P + ++L+ G+ KGCY GQEVV+R Q+R +++
Sbjct: 211 LGLQAGVPSITLSTQEQFVPQMVN-----LELVGGVDFRKGCYPGQEVVARSQYRGTLKR 265
Query: 203 R 203
R
Sbjct: 266 R 266
>gi|309782013|ref|ZP_07676743.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
gi|308919079|gb|EFP64746.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
Length = 346
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 54/237 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+
Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97
Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103
+L +L + LR+ V+ E +N V
Sbjct: 98 LIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVNAVA-- 155
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150
Q T R A W H E KT + L +
Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRQRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLSLQ 214
Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ + F+P + ++LL G+ KGCY GQE+V+R Q+R +++R
Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEIVARSQYRGTLKRR 266
>gi|156839684|ref|XP_001643530.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114145|gb|EDO15672.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 502
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ R+ +GI+D DF TI+P + D LN ++ KGCY+GQE+ +R+ I+RK
Sbjct: 319 FRSYRLKNGIIDSVRDFRSETIWPLELNFDFFLNSVNPDKGCYLGQEITTRMFSTGILRK 378
Query: 203 R 203
R
Sbjct: 379 R 379
>gi|326316630|ref|YP_004234302.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373466|gb|ADX45735.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 304
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 22/218 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ + +
Sbjct: 11 LNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRAGDAEV 70
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------IQPINGVVLS-WNQEHT 109
+L R +++ +L + LR+ + + + G L W+++ T
Sbjct: 71 LLVCSRDVLATVLKRLSMFVLRAKARLSDATADFALWGLAGDTVAAVAGEALPPWSRQDT 130
Query: 110 FSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPN-TDFLPSTI 165
+ + LL + G + + + G+ P T L
Sbjct: 131 PQGTVVHLHPGAGQPRALLAQPAGQPAPAGPALAPGLWEWGEVQSGV--PTLTAPLVELF 188
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P + + G++ KGCY GQEVV+R Q R +++R
Sbjct: 189 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 226
>gi|223041896|ref|ZP_03612082.1| hypothetical protein AM202_0492 [Actinobacillus minor 202]
gi|223017312|gb|EEF15737.1| hypothetical protein AM202_0492 [Actinobacillus minor 202]
Length = 295
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
+ LS I++ G A +LQ +T DV K+A G LT P+GK+ +
Sbjct: 16 CILLSQYRLIEIAGVDAEKYLQGQLTCDVA----KLAVGEHTLTSHCDPKGKMSALLRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGV----VLSWNQEHTFSN 112
+ E + F I + + +L Y + S V + + G+ +L+ QE++ +
Sbjct: 72 RAEAERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGITDFELLAKCQENSTAL 131
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDA 170
S ++ +I WG ++ + + I G I+ F + P A
Sbjct: 132 SLTQGQKRAI-------VWGEELAPNAEAALWDLMDIQDGLPILLKENQF---ELIPQAA 181
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPI 220
L + N IS TKGCYIGQE V+R ++R ++ + G DLP + I
Sbjct: 182 NLQAVENAISFTKGCYIGQETVARAKYRGANKRAMFTLVGEVAEKVDLPQPATSI 236
>gi|320582648|gb|EFW96865.1| Mitochondrial matrix protein [Pichia angusta DL-1]
Length = 458
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 139 SDIKTYHE----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
DIK HE LR GI + +DF T+ P + +D +NGI+ KGCY+GQE+ R
Sbjct: 257 EDIKVGHEVYDTLRTLVGISEI-SDFKSETL-PFENNLDYMNGINYNKGCYVGQELTIRT 314
Query: 195 QHRNIIRKRPMII 207
H +IRKR M I
Sbjct: 315 FHSGVIRKRVMPI 327
>gi|289209042|ref|YP_003461108.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix]
gi|288944673|gb|ADC72372.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 30/248 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ ++V G A FLQ D+ + ++ S+ +P+G+ F + + D++
Sbjct: 43 LSHRGLLEVRGDDATEFLQGQFGNDITQVDASHSQISSYSSPKGRAYAVFRVLRTA-DSY 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNS-----SFID 117
+LE+ + +++ +L + LR++V+IE I+ + + E +N+ + +D
Sbjct: 102 LLEMPADRIEAIAKRLRMFVLRAHVVIERADDSHIHFGLSGPDAESELNNALGVCPANVD 161
Query: 118 ERFSIADVLLHRTWGHNEKIA-----SDIKT-YHELRINHGIVDPNT----DFLP----- 162
+ V + R G + + ++T + +L + G V P D L
Sbjct: 162 DVVEKDGVTVVRVNGVHPRFELFGELEPMRTAWDKLNVRSGPVGPREWALLDILAGMPTV 221
Query: 163 ----STIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS- 216
S +F P + L I+ KGCY GQEVV+R+ + +++R + PP
Sbjct: 222 VEATSELFVPQMLNLHALGAINFEKGCYPGQEVVARMHYLGKLKRRMFRLAIHAAEPPQP 281
Query: 217 GSPILTDD 224
GSP+ D
Sbjct: 282 GSPVYRAD 289
>gi|187928513|ref|YP_001899000.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
gi|187725403|gb|ACD26568.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
Length = 346
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 54/237 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A FL +T V L AR + +P+G++L L+ + + DT +L+ D+
Sbjct: 39 IAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIVLQTDK 97
Query: 72 SKRDSLIDKLLFYKLRSN----------------------------VIIEIQPINGVVLS 103
+L +L + LR+ V+ E +N V
Sbjct: 98 LIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVNAVA-- 155
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWG-HNEKIASDIKT------------YHELRIN 150
Q T R A W H E KT + L +
Sbjct: 156 -QQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLSLQ 214
Query: 151 HGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ + F+P + ++LL G+ KGCY GQE+V+R Q+R +++R
Sbjct: 215 AGVPHITLPTQEQFVPQMVN-----LELLGGVDFRKGCYPGQEIVARSQYRGTLKRR 266
>gi|319941082|ref|ZP_08015418.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
gi|319805439|gb|EFW02241.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
Length = 322
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N + I+V G+ A FL T + L + + +P+G+ LL + + + D +L
Sbjct: 19 NTALIRVTGEDARHFLHGQFTQKIENLAGRTTL-AGYCSPKGR-LLAVMRAWLSGDAVML 76
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER------- 119
+ + + +L Y LRS V E+ P ++++ +E + ++ E
Sbjct: 77 ALPAEMAEGFLKRLHMYVLRSKVSFEVVDPAPAMLIAVGEEGAKTLAALGLEMPAHGVCI 136
Query: 120 ----FSIADVLLHRT------WGHNE-------KIASDIKTYHE-------LRINHGI-- 153
F++ + +T G K A+D I+ GI
Sbjct: 137 EKDGFTLLGIEPSQTVPGFCAGGARALVILPAGKTAADFGLTPAPAAWALASSISAGIPQ 196
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
V P T T P ++L++G+S +KGCY GQEVVSR+QH +R +
Sbjct: 197 VLPPTR---ETFVPQAVNLELVDGVSFSKGCYPGQEVVSRLQHLGETNRRAAV 246
>gi|166712290|ref|ZP_02243497.1| hypothetical protein Xoryp_12755 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 290
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 109/290 (37%), Gaps = 52/290 (17%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 19 QYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLL 78
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADVLLH 128
+ +L + LR + I + F+ F ER A L
Sbjct: 79 PDGNAAEIAAQLGRFVLRRKLKISTAAL------------FAFGGFAAPERARAAQADLG 126
Query: 129 RTWGHNEKIASDIKT---------YHELRINHGIVDPNTDFL-----------------P 162
++I D+ + Y E + I P+ D
Sbjct: 127 -----TQRIVLDLGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARLVEGQR 181
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
P +D L S+ KGCY GQE+V+R H KR + + TD +G +
Sbjct: 182 EQWTPQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAM 240
Query: 223 DDIEIGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269
D IGT+ V G ALA+ ++ D ++ G HG R +A P
Sbjct: 241 DGAAIGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 286
>gi|238752998|ref|ZP_04614457.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380]
gi|238708786|gb|EEQ01045.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380]
Length = 327
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 40/257 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP+ A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPHDRHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------- 104
E +E RS ++ +++L Y + S V I QP V+L
Sbjct: 80 GEGLAFIE-RRSVLNNQLNELKKYAVFSKVAIAAQP-EAVLLGIAGAEAKTALAQIFAEL 137
Query: 105 -NQEH--------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRI 149
N EH T + S ERF +A L+ + G + ++ + + L I
Sbjct: 138 PNAEHPVIQQGDSTLLHFSQPAERFLLVTDAELAQQLVEKLAGSAQ--LNNSQQWLALDI 195
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + D + + P + L+GIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 196 EAGLPIIDAD-ISAQFIPQATNIQALDGISFSKGCYTGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSPILTDDIE 226
S P+ +D+E
Sbjct: 255 N----ASRVPVAGEDLE 267
>gi|261379095|ref|ZP_05983668.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
gi|269144476|gb|EEZ70894.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 34/240 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ L+ +D +L +
Sbjct: 11 VRVSGEDRQSFLHGQLSNDINHLQSGQACYATYNTPKGRVIANMLVINRGDD-LLLAMSE 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFS---NSSFIDERFSIADV 125
+S + +L + LR+ V+ EI P N G L+ + E + N +F ++ S
Sbjct: 70 DLTESTVKRLRMFVLRAKVVFEI-PDNYGVGAELAESAEPLAAREPNLAFAAQQDSDGIC 128
Query: 126 LLHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ G +IA + HE+R + + T A+
Sbjct: 129 SIALPHGGILRIAPETALPPYDAAAESAWKLHEIRSGYPWICAATK--------ETAVAQ 180
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLAADGEEAG 239
>gi|163749105|ref|ZP_02156355.1| hypothetical protein KT99_19729 [Shewanella benthica KT99]
gi|161331175|gb|EDQ02064.1| hypothetical protein KT99_19729 [Shewanella benthica KT99]
Length = 297
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------LISKIEED 63
+ V G+ F+ +T D+ +L R A P+GK+L F LI + D
Sbjct: 1 MSVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFALEDALIMMMPSD 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFS- 121
T L++ + + ++ K + ++ + +W N+ ++++ ID+ +
Sbjct: 61 TLALDLTQLAKYAVFSKADLVDVTDKFLL-LGVAGEQAQAWVNERFGPADNTSIDKEVTV 119
Query: 122 IADVLLHRTWGH-----------------NEKIASDIKTYHELRINHGIVDPNTDFLPST 164
IA LL + N++I D + L I G PN +
Sbjct: 120 IAGGLLLKDNDRFIIVMDKEAAAPLLTSINQEIV-DATAWQALEIQSGY--PNLAASHQS 176
Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
F P + +NGIS KGCY+GQE ++R+++R ++ I++GT
Sbjct: 177 KFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGT 223
>gi|240948853|ref|ZP_04753209.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305]
gi|240296668|gb|EER47279.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305]
Length = 295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 31/235 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
+ LS I++ G A +LQ +T DV K+A G LT P+GK+ +
Sbjct: 16 CILLSQYRLIEIAGIDAEKYLQGQLTCDV----SKLAIGEHTLTSHCDPKGKMSALLRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVV----LSWNQEHTFSN 112
+ E + F I + + +L Y + S V + + GV L+ QE++ +
Sbjct: 72 RAEAERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGVTDFERLAKQQENSTAL 131
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDA 170
+ ++ +I WG +D + + I G I+ F + P A
Sbjct: 132 ALTQGQKRAI-------VWGEEFAPNADTTLWDLMDIQDGLPILLKANQF---ELIPQAA 181
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220
L + N IS TKGCYIGQE V+R ++R ++ + G DLP + I
Sbjct: 182 NLQAVENAISFTKGCYIGQETVARAKYRGANKRAMFTLVGKVAEEVDLPQPATSI 236
>gi|33596201|ref|NP_883844.1| hypothetical protein BPP1557 [Bordetella parapertussis 12822]
gi|33601612|ref|NP_889172.1| hypothetical protein BB2635 [Bordetella bronchiseptica RB50]
gi|33573204|emb|CAE36859.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33576049|emb|CAE33128.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGTDDLPPS 216
F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R +I DLP
Sbjct: 214 FIPQTVN-----LDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVIAEAPADLP-- 266
Query: 217 GSPILTDDI 225
P+ DI
Sbjct: 267 -DPLAGQDI 274
>gi|33592903|ref|NP_880547.1| hypothetical protein BP1845 [Bordetella pertussis Tohama I]
gi|33572551|emb|CAE42131.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332382316|gb|AEE67163.1| hypothetical protein BPTD_1822 [Bordetella pertussis CS]
Length = 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGTDDLPPS 216
F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R +I DLP
Sbjct: 214 FIPQTVN-----LDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVIAEAPADLP-- 266
Query: 217 GSPILTDDI 225
P+ DI
Sbjct: 267 -DPLAGQDI 274
>gi|164663221|ref|XP_001732732.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966]
gi|159106635|gb|EDP45518.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966]
Length = 289
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-- 113
LI E + ++E+D+ LI + +KLRS I N V +W+ + N+
Sbjct: 8 LIPYAREPSILVEVDKCISTDLIAFVKRFKLRSKFQI-----NDVSDAWDVMQLYGNAQV 62
Query: 114 -----------SFIDERFSIAD--VLLHRTWGHNE---KIASDIKTYHELRINHGIVDPN 157
+F D R VLL + E K A+D+ Y R+ G+ + +
Sbjct: 63 DLDMLNLYGAYAFRDVRSPEMGWRVLLPKKHTEQEIPLKNATDVD-YTIHRMLQGVPEGS 121
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ + P ++ +D ++G+ KGCYIGQE+ +R ++RKR M I+
Sbjct: 122 KEIHMGSSLPLESCIDYMHGVDFRKGCYIGQELTARTFFTGLVRKRIMPIS 172
>gi|324519008|gb|ADY47260.1| Transferase caf-17 [Ascaris suum]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+D Y E R+ GIV+ + + +A DL++G+S KGCY+GQE+ +R R
Sbjct: 48 ADASLYEERRLEFGIVEGGIETRGALPVYRNA--DLMHGMSDNKGCYLGQEMTARTL-RA 104
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDD-IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
I+KR ++ T D G + D +G + V G + LA+ R+D+ D + L
Sbjct: 105 AIKKR--VLPFTCDGAAKGRVMDPDGYTNMGEVLVCNGHRGLALLRLDQGDVS----RCL 158
Query: 258 TVHGVRVKASFPHWY 272
V ++ P W+
Sbjct: 159 KAGDVDIRPFVPSWW 173
>gi|294657445|ref|XP_459753.2| DEHA2E10318p [Debaryomyces hansenii CBS767]
gi|218511960|sp|Q6BPW7|CAF17_DEBHA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|199432698|emb|CAG87991.2| DEHA2E10318p [Debaryomyces hansenii]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R +G+ + S++ P + +DL NG+SL KGCY+GQE+ R + IIRKR
Sbjct: 271 RFMNGLFETQDSPKESSLLPFEMNLDLTNGLSLEKGCYVGQELTIRTYNNGIIRKR 326
>gi|116689916|ref|YP_835539.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
gi|116648005|gb|ABK08646.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
Length = 344
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 96
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92
+L + + + ++ +L + LR+ V +
Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEP 214
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|84623846|ref|YP_451218.1| hypothetical protein XOO_2189 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58426529|gb|AAW75566.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84367786|dbj|BAE68944.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 186 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAMDGAA 244
Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269
IGT+ V G ALA+ ++ D ++ G HG R +A P
Sbjct: 245 IGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 286
>gi|170728217|ref|YP_001762243.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908]
gi|169813564|gb|ACA88148.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908]
Length = 320
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + V G+ F+ +T D+ +L R A P+GK+L F + + F
Sbjct: 23 LSHMGLMSVTGEQGRSFIHGQVTTDISSLESNQWRWGAHCDPKGKMLASFRTFSVADALF 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP---INGVVLSWNQEHTFSNSSFIDERFS 121
++ + + + + +L Y + S ++++ I GV QE + I + +
Sbjct: 83 MM-MPKDTLAADLPQLAKYAVFSKADLVDVSADWTILGVAGEQAQEWVNNYFGEITQELT 141
Query: 122 --IADVLLHRTW--------GHNEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164
VLL +E + S I T + L I G+ PN
Sbjct: 142 EIPGGVLLKDGERFIIIIENAPSEPLLSSINTPIQESSAWQALEIQAGL--PNLGVSHQG 199
Query: 165 IF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
F P + +NGIS KGCY+GQE ++R+++R ++ I++GT
Sbjct: 200 QFVPQMCNVQAINGISFKKGCYMGQETIARMKYRGGNKRALYILSGT 246
>gi|188576489|ref|YP_001913418.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520941|gb|ACD58886.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 268
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDSAVEAGDAVAMDGAA 222
Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269
IGT+ V G ALA+ ++ D ++ G HG R +A P
Sbjct: 223 IGTVVSVAGNLALAVLPLELTLDADTPLQAG----AHGARPRAIAP 264
>gi|294651372|ref|ZP_06728690.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822727|gb|EFF81612.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 240
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T V L +R +AI +G+I I KI ++F L + + +
Sbjct: 13 GVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQDQAE 72
Query: 76 SLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ F K++ I ++ P +NG+ +++ T N+ + I + +
Sbjct: 73 EFAKHIRKFGAFSKMKLEEIGQVFPTVNGIQTEFSKSETDINA------WQIQAIQSGQA 126
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
W + T+ L P + + G+ KGCY+GQE+
Sbjct: 127 W----------------------ITQTTEHL---FQPQELRLHQREGVHFDKGCYLGQEI 161
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
V+R+ + + +I G + PP + + D + ++ G AL +A+
Sbjct: 162 VARLWFKAKPKHWLHLIQGKETTPPPATQLNKDVEVVNSIAFEGGYIALVVAK 214
>gi|126175700|ref|YP_001051849.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS155]
gi|125998905|gb|ABN62980.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS155]
Length = 320
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++ F
Sbjct: 24 LSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQDALF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+L + + + + +L Y + S + ++ E S F+ E F
Sbjct: 84 ML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLIGVAGEQA---SLFVSEHFGDIHQ 139
Query: 123 -------------AD--VLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPN-TDF 160
AD +L+ +A D + L I G PN
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEIIAGY--PNLAAS 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSG 217
S P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 198 HASQYVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESG 257
Query: 218 SPILTDD 224
I +D
Sbjct: 258 LEIAMED 264
>gi|229588983|ref|YP_002871102.1| hypothetical protein PFLU1454 [Pseudomonas fluorescens SBW25]
gi|229360849|emb|CAY47707.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 313
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 87 RSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
R++ +I ++ G W EH + S + ER AD+ NE + I
Sbjct: 130 RTDALIAVRVSPGRAELWAPAEHADTVRSQLTERLQQADL--------NEWLLGQI---- 177
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 178 --RAGIGQVMPQTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232
Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
++ ++P G+P+ + VV+ KA
Sbjct: 233 RLSLNATEMPAPGTPLFSPSHNSAIGEVVIAAKA 266
>gi|225631230|ref|ZP_03787922.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591076|gb|EEH12266.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 182
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 25/193 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSS- 114
+ T +LE + +I+KL L++ + ++I+ ++ GV+ + S S
Sbjct: 61 GKYT-LLECENIHLQQIIEKLDL--LKTYLRVKIKDVSALYKVGVLFNTKLAECSSKSQV 117
Query: 115 -FIDERFSIADVLLHRTWG----HNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIF 166
F D R H+ G H ++I D Y ++RI + + D D + ++ F
Sbjct: 118 IFQDPR--------HKLLGMRIIHKDEIKEPVGDFTQYEKVRIQNLVPDGAKDMVQNSSF 169
Query: 167 PHDALMDLLNGIS 179
P L+D +NGIS
Sbjct: 170 PLQFLVDKVNGIS 182
>gi|159899967|ref|YP_001546214.1| glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC
23779]
gi|159893006|gb|ABX06086.1| Glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC
23779]
Length = 327
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D TYH LR+ G P + L P +A +L + +S KGCYIGQE+++R+ R
Sbjct: 190 DRPTYHTLRVEAGY--PALNELNEEFIPLEA--NLWDAVSFNKGCYIGQEIIARMDSRGR 245
Query: 200 IRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
+ K+ + ++G ++P + + + + GTL VV AL
Sbjct: 246 LAKKLQGLGLSGAVEVPAT---LTKNGQDAGTLTSVVWSPAL 284
>gi|53723621|ref|YP_103082.1| hypothetical protein BMA1427 [Burkholderia mallei ATCC 23344]
gi|76811846|ref|YP_333840.1| glycine cleavage T-protein (aminomethyl transferase) [Burkholderia
pseudomallei 1710b]
gi|121598474|ref|YP_993237.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei SAVP1]
gi|124386525|ref|YP_001029318.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei NCTC 10229]
gi|126441510|ref|YP_001059318.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 668]
gi|134277134|ref|ZP_01763849.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 305]
gi|166998741|ref|ZP_02264595.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20]
gi|167893846|ref|ZP_02481248.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 7894]
gi|167902296|ref|ZP_02489501.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167910537|ref|ZP_02497628.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 112]
gi|167918564|ref|ZP_02505655.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei BCC215]
gi|217421508|ref|ZP_03453012.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 576]
gi|226197475|ref|ZP_03793052.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
gi|254178469|ref|ZP_04885124.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei ATCC 10399]
gi|254179463|ref|ZP_04886062.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655]
gi|254189150|ref|ZP_04895661.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei Pasteur 52237]
gi|254197345|ref|ZP_04903767.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei S13]
gi|254200028|ref|ZP_04906394.1| folate-binding protein YgfZ [Burkholderia mallei FMH]
gi|254206362|ref|ZP_04912714.1| folate-binding protein YgfZ [Burkholderia mallei JHU]
gi|254262077|ref|ZP_04953131.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a]
gi|254297344|ref|ZP_04964797.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 406e]
gi|254358223|ref|ZP_04974496.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280]
gi|262193312|ref|YP_001080745.2| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei NCTC 10247]
gi|52427044|gb|AAU47637.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76581299|gb|ABA50774.1| Glycine cleavage T-protein (aminomethyl transferase) [Burkholderia
pseudomallei 1710b]
gi|121227284|gb|ABM49802.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei SAVP1]
gi|124294545|gb|ABN03814.1| folate-binding protein YgfZ [Burkholderia mallei NCTC 10229]
gi|126221003|gb|ABN84509.1| folate-binding protein YgfZ [Burkholderia pseudomallei 668]
gi|134250784|gb|EBA50863.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 305]
gi|147749624|gb|EDK56698.1| folate-binding protein YgfZ [Burkholderia mallei FMH]
gi|147753805|gb|EDK60870.1| folate-binding protein YgfZ [Burkholderia mallei JHU]
gi|148027350|gb|EDK85371.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280]
gi|157808043|gb|EDO85213.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 406e]
gi|157936829|gb|EDO92499.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei Pasteur 52237]
gi|160699508|gb|EDP89478.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei ATCC 10399]
gi|169654086|gb|EDS86779.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei S13]
gi|184210003|gb|EDU07046.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655]
gi|217395250|gb|EEC35268.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 576]
gi|225930854|gb|EEH26864.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
gi|243065095|gb|EES47281.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20]
gi|254220766|gb|EET10150.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a]
gi|261835038|gb|ABO04361.2| folate-binding protein YgfZ [Burkholderia mallei NCTC 10247]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92
+L + + + ++ +L + LR+ +
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ + +I R D L ++++ + + ++R
Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 218
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207
I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273
Query: 208 TGTD 211
GTD
Sbjct: 274 AGTD 277
>gi|237812642|ref|YP_002897093.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346]
gi|237505565|gb|ACQ97883.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92
+L + + + ++ +L + LR+ +
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ + +I R D L ++++ + + ++R
Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSATVWDWLDVRAGEP 218
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207
I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273
Query: 208 TGTD 211
GTD
Sbjct: 274 AGTD 277
>gi|146078890|ref|XP_001463632.1| hypothetical protein [Leishmania infantum JPCM5]
gi|321399563|emb|CBZ08750.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 390
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y L + GI + F + P + +D L G+S KGCY+GQE+ R + RKR
Sbjct: 227 YTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKR 286
Query: 204 --PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIA 242
P+ PP+ G P+ + E IG + V G+ + +
Sbjct: 287 TVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVGEPLYSAAKEKIGEVTGVCGQVGIGLF 346
Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
R+ VD A + L + G V++ P W+
Sbjct: 347 RLRYVDKATRTVPGLQLQDGTPVQSHLPDWW 377
>gi|322436415|ref|YP_004218627.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9]
gi|321164142|gb|ADW69847.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9]
Length = 324
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
L + +KGCY+GQE+V RI R + + T DLPP+G+P+ D+ +G
Sbjct: 216 LRALHFSKGCYLGQEIVERINSRGAVHRTFAGFLLTGDLPPAGTPLTADEKPVG 269
>gi|53719070|ref|YP_108056.1| hypothetical protein BPSL1434 [Burkholderia pseudomallei K96243]
gi|238563338|ref|ZP_00439040.2| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4]
gi|52209484|emb|CAH35436.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|238520913|gb|EEP84369.1| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4]
Length = 317
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 10 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 69
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92
+L + + + ++ +L + LR+ +
Sbjct: 70 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 128
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ + +I R D L ++++ + + ++R
Sbjct: 129 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 187
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207
I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 188 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 242
Query: 208 TGTD 211
GTD
Sbjct: 243 AGTD 246
>gi|167823758|ref|ZP_02455229.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 9]
Length = 341
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------------------------- 92
+L + + + ++ +L + LR+ +
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGIHT 159
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ + +I R D L ++++ + + ++R
Sbjct: 160 KVDAPAGALMRLPDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDWLDVRAGEP 218
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---II 207
I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 219 RITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 273
Query: 208 TGTD 211
GTD
Sbjct: 274 AGTD 277
>gi|328949863|ref|YP_004367198.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
gi|328450187|gb|AEB11088.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
Length = 330
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 148 RINHGIVDPNTDFLPSTI--FPHD-ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
R+ GI D LP + P + L DL + KGCY+GQE+++R++ R +R+R
Sbjct: 211 RVERGIPD-----LPEALGRLPQEVGLEDL---VHPGKGCYLGQEIMARLEARGNVRRRL 262
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
M + ++ PSG+ + + +G +G VV L + + A++ G + V GV
Sbjct: 263 MGLR-LGEVVPSGAEVTHEGRAVGQVGTVVRSPRLGAVALAVLGKALEPGDRVEVGGVAA 321
Query: 265 K-ASFP 269
+ A+ P
Sbjct: 322 EVAALP 327
>gi|169794833|ref|YP_001712626.1| hypothetical protein ABAYE0658 [Acinetobacter baumannii AYE]
gi|213157840|ref|YP_002320638.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057]
gi|215482380|ref|YP_002324562.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii
AB307-0294]
gi|301345760|ref|ZP_07226501.1| hypothetical protein AbauAB0_05935 [Acinetobacter baumannii AB056]
gi|301511540|ref|ZP_07236777.1| hypothetical protein AbauAB05_08168 [Acinetobacter baumannii AB058]
gi|301596697|ref|ZP_07241705.1| hypothetical protein AbauAB059_12802 [Acinetobacter baumannii
AB059]
gi|332852287|ref|ZP_08434092.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150]
gi|332870510|ref|ZP_08439274.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113]
gi|169147760|emb|CAM85623.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057000|gb|ACJ41902.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057]
gi|213986407|gb|ACJ56706.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii
AB307-0294]
gi|332729417|gb|EGJ60757.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150]
gi|332732247|gb|EGJ63515.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113]
Length = 240
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + K ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
L + Y S + + Q G V N FS++ + ++ + W
Sbjct: 73 ELAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
IA T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT D P + L +D+E+ G + +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216
>gi|127514126|ref|YP_001095323.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
gi|126639421|gb|ABO25064.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
Length = 322
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--------LI 57
LS+ I V G+ A F+ +T D+ +L R A P+GK+L F L+
Sbjct: 24 LSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCDPKGKMLASFRTFAHQDALL 83
Query: 58 SKIEEDTFILEIDRSKR----------DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107
+ +T L++ + ++ D+ D LF + I G + + E
Sbjct: 84 MMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFGVSGEQALAWIAQAFGEIAA---E 140
Query: 108 HTFSNSSFI---DERFSIA---DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
T I ER+ IA D ++ I D + + I G+ PN
Sbjct: 141 LTEIPGGVILRDGERYIIAVKCDTQAELLAKIDQPI-YDFSAWQAIEIAAGL--PNLYAR 197
Query: 162 PSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ F P + ++GIS TKGCY+GQE V+R+++R ++ I+ G+
Sbjct: 198 HQSQFVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRALYIVQGS 247
>gi|149245367|ref|XP_001527181.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514322|sp|A5DXC3|CAF17_LODEL RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|146449575|gb|EDK43831.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 513
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
S++ P + +D +NG+SL KGCY+GQE+ R + IIRKR
Sbjct: 310 SSLLPFECNLDYINGLSLDKGCYVGQELTIRTYNNGIIRKR 350
>gi|320163245|gb|EFW40144.1| hypothetical protein CAOG_00669 [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
W ++ S + Y + R G+ + + F +T FP ++ + LNG+ KGCY+GQE+
Sbjct: 309 WATLGRLGS-LGEYDDRRYALGLAEGVSGFRFATSFPLESNFERLNGVHFNKGCYLGQEL 367
Query: 191 VSRIQHRNIIRKR 203
R R + RKR
Sbjct: 368 THRSHSRGVTRKR 380
>gi|322499496|emb|CBZ34569.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 391
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y L + GI + F + P + +D L G+S KGCY+GQE+ R + RKR
Sbjct: 228 YTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKR 287
Query: 204 --PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIA 242
P+ PP+ G P+ + E IG + V G+ + +
Sbjct: 288 TVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVGEPLYSAAKEKIGEVTGVCGQVGIGLF 347
Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
R+ VD A + L + G V++ P W+
Sbjct: 348 RLRYVDKATRTVPGLQLKDGTPVQSHLPDWW 378
>gi|241764590|ref|ZP_04762606.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
gi|241365953|gb|EER60579.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
Length = 304
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + I+V G+ A FL +T D L + AR +A L+P+G++ F+ K
Sbjct: 11 LPHLGVIRVEGEDAAKFLHGQLTQDFALLDLQHARLAAFLSPKGRMQASFIGFKCSATEV 70
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124
+L R + +L + LR+ + + + S + ++ AD
Sbjct: 71 LLICSRDLLAPTLKRLSMFVLRAKARLSDASADYALYGLAGSAIESVAGGAQPAWTKADF 130
Query: 125 -----VLLHRTWGHNEKI-------------ASDIKTYHELRINHGIVD---PNTD-FLP 162
V L+ G I D + + G+ P D F+P
Sbjct: 131 GAATVVHLYPALGQPRAIWVAPATEPAPAGATLDTALWQWSDVQSGVATLTAPVVDAFVP 190
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ + ++G++ KGCY GQEVV+R Q R +++R I
Sbjct: 191 QMLN-----YESVDGVNFKKGCYPGQEVVARSQFRGTLKRRAYI 229
>gi|15837670|ref|NP_298358.1| hypothetical protein XF1068 [Xylella fastidiosa 9a5c]
gi|9106015|gb|AAF83878.1|AE003943_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 305
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 14/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + +++ G + F A ++D L SA LTP+G++ F + + E+
Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQDLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121
+L + + + +L Y R V I ++ I T + ++ +D
Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERDLITTGTYDTPVHATGTQAAQLDGITELD 153
Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174
++ + L R T ++ + + + G+ P D + P +D
Sbjct: 154 VSGITLPRRLLLVPTAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V
Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVA 270
Query: 235 GKKALAIARID 245
ALA+ ID
Sbjct: 271 EGLALAVLPID 281
>gi|167855722|ref|ZP_02478478.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755]
gi|167853178|gb|EDS24436.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755]
Length = 296
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLIS 58
V L+ I+V G A +LQ +T DV K+A G LT P+GK+ F +
Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVA----KLAVGEQSLTCHCDPKGKMSALFRLY 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EI-QPING-----VVLSWNQEHTFS 111
+ + F L I ++ + +L Y + S V E+ Q + G ++ +N+ T
Sbjct: 72 RATAEQFFLIIQQNLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT-- 129
Query: 112 NSSFIDERFSIADVLLHRT--WGHNEKIAS-DIKTYHELRINHGI---VDPNT-DFLPST 164
+ ++DE RT WG A+ D + + I G+ N + +P
Sbjct: 130 -ACYLDEE-------PKRTIFWGDIAVEANGDGSLWDLIDIQQGVPLLYKANQFELIPQA 181
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-----ITGTDDLPPSGSP 219
L L IS TKGCYIGQE V+R ++R KR M + G +LP S
Sbjct: 182 T----NLQQLDKAISFTKGCYIGQETVARAKYRG-ANKRAMFTFVGNVEGEIELPAVASS 236
Query: 220 I 220
I
Sbjct: 237 I 237
>gi|238795222|ref|ZP_04638807.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909]
gi|238725442|gb|EEQ17011.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909]
Length = 330
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 36/255 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------- 104
E +E RS D+ + +L Y + S V I QP + V+L
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVTIAAQP-DAVLLGIAGAQAKAALAEVFAEL 137
Query: 105 -NQEHTFS---NSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINH 151
+ EH + NS+ + LL +++ + + K + L I
Sbjct: 138 PSAEHPVTQQGNSTLLHFSLPAERFLLVTDAEQAQQLVATLADRAQFNNSKQWLALDIEA 197
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 198 GLPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGA- 255
Query: 212 DLPPSGSPILTDDIE 226
S P +D+E
Sbjct: 256 ---ASRVPAAGEDLE 267
>gi|289665881|ref|ZP_06487462.1| hypothetical protein XcampvN_23092 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 268
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLDTDSAVEAGDAVAMDGTT 222
Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269
IGT+ V G ALA+ ++ D ++ G +G R +A P
Sbjct: 223 IGTVVSVAGTLALAVLPLELTLDADATLQAG----AYGARPRAIMP 264
>gi|238921204|ref|YP_002934719.1| hypothetical protein NT01EI_3346 [Edwardsiella ictaluri 93-146]
gi|259710250|sp|C5BAS5|YGFZ_EDWI9 RecName: Full=tRNA-modifying protein ygfZ
gi|238870773|gb|ACR70484.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 331
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+D + L I GI +PN D FLP + + L GIS TKGCY GQE+V+R
Sbjct: 186 ADSAQWLALDIESGIPLIDEPNCDSFLPQAVN-----LQALGGISFTKGCYSGQEMVARA 240
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++R R+ + G+ + P S +D+E+
Sbjct: 241 KYRGANRRALFWLRGSAERLPHAS----EDLEL 269
>gi|289669030|ref|ZP_06490105.1| hypothetical protein XcampmN_11172 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 268
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 164 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLDTDSAVEAGDAVAMDGTT 222
Query: 227 IGTLGVVVGKKALAIARID---KVDHAIKKGMALTVHGVRVKASFP 269
IGT+ V G ALA+ ++ D ++ G +G R +A P
Sbjct: 223 IGTVVSVAGTLALAVLPLELTLDADATLQAG----AYGARPRAIMP 264
>gi|254247996|ref|ZP_04941317.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
gi|124872772|gb|EAY64488.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
Length = 344
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 96
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92
+L + + + ++ +L + LR+ V +
Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPIVSPAVWDWLDVRAGEP 214
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 270 GETDNVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|325917570|ref|ZP_08179770.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937]
gi|325536204|gb|EGD08000.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937]
Length = 289
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 25/253 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 15 LHDMQYVRLVGTDAVAFAHAQFANDVQALEIGQWQWNAWLTAKGRVIAIFALLREDDTQV 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---QEHTFSNSSFID---ER 119
++ + K D + +L + R + IN LS Q + + D +R
Sbjct: 75 LMLLPDGKADEIAAQLGRFVFRRKL-----KINATRLSAYGGFQAPDLAKGAHADIGTQR 129
Query: 120 FSI--ADVLLHRTW--GHNEKIASDIK------TYHELRINHGIVD-PNTDFLPSTIFPH 168
++ + RT + +A+ I+ + ++ G+V P+ T P
Sbjct: 130 IALDMGSAAVPRTLLIFSADALAAPIELPNMDAQWRRADLHLGLVRLPDAQREQWT--PQ 187
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+D L S+ KGCY GQE+V+R H KR + + T+ +G + D IG
Sbjct: 188 QLALDRLQAFSVKKGCYPGQEIVART-HFLGKAKRALQLLETEAAVQAGDSVELDGAAIG 246
Query: 229 TLGVVVGKKALAI 241
T+ V G ALA+
Sbjct: 247 TVVSVAGDLALAV 259
>gi|71275603|ref|ZP_00651888.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Dixon]
gi|71899500|ref|ZP_00681657.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|170729587|ref|YP_001775020.1| hypothetical protein Xfasm12_0376 [Xylella fastidiosa M12]
gi|71163494|gb|EAO13211.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Dixon]
gi|71730720|gb|EAO32794.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|167964380|gb|ACA11390.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 267
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+++ G + F A ++D L SA LTP+G++ F + + E+ +L +
Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSSFIDER 119
+ + +L Y R V I ++ P++ + Q F + +D
Sbjct: 61 DGEAVMMAPQLQRYIFRRKVQIAVERNLITTATYDTPVHA---TGTQAAQFDGITELD-- 115
Query: 120 FSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALM 172
++ + L R ++ + + + G+ P D + P +
Sbjct: 116 --VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGL 171
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG +
Sbjct: 172 DWLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSTEGDIGQVAS 230
Query: 233 VVGKKALAIARID 245
V ALA+ ID
Sbjct: 231 VAEGLALAVLPID 243
>gi|262369241|ref|ZP_06062569.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315309|gb|EEY96348.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 240
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 33/245 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + I G A+ FLQ +T +V L + +AI +G+I ++K
Sbjct: 1 MSDLAFSSFTLI---GVDALKFLQGQVTVNVEALAENTTQYTAICDLKGRIHFGLWLTKR 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ F + + + + + + S + +E P+ V ++ Q+ T +F E
Sbjct: 58 NPEHFEIVTTQDQSEEFAKHIKKFGAFSKMKLE--PVGSVFPTFTQDRT----TFSAE-- 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGI 178
+DI + I HG +D + + + P + + G+
Sbjct: 110 -----------------PTDIAAWQVQAITHGEAFIDQSIEHM---FQPQELRLHQRGGV 149
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEV++R+ + + +I GT P + + + + G A
Sbjct: 150 HYDKGCYLGQEVIARLWFKAKPKAWLHLIQGTGSAPAQAEQLNKGIQVVNSAAIDGGYIA 209
Query: 239 LAIAR 243
L +AR
Sbjct: 210 LVVAR 214
>gi|238759289|ref|ZP_04620455.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236]
gi|238702450|gb|EEP95001.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236]
Length = 330
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSW---------- 104
E +E RS DS + +L Y + S V+I QP I G
Sbjct: 80 GEGLAFIE-RRSLLDSQLSELKKYAVFSKVVIAPQPDVVLLGIAGTAAKTALAEVFTELP 138
Query: 105 NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ EH T + S ERF + A L+ G + ++ K + L I
Sbjct: 139 STEHPVVQQGQSTLLHFSLPAERFLLVTDAEQAQQLVATLSGSAQ--FNNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGF--PIIDSESSAQFIPQATNIQALNGISFSKGCYSGQEMVARAKYRGANKRALYWLAG 254
Query: 210 -TDDLPPSG 217
+ +P +G
Sbjct: 255 HANRVPAAG 263
>gi|290476407|ref|YP_003469312.1| hypothetical protein XBJ1_3430 [Xenorhabdus bovienii SS-2004]
gi|289175745|emb|CBJ82548.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 332
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 38/254 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
+ L++ I V G A +LQ +T+D+ +L K SA +GK+ +
Sbjct: 23 ISLNDWGMISVTGADAEKYLQGQVTSDIASLNQKHVL-SAHCDAKGKMWSNLRLFHRGEG 81
Query: 58 -SKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGV 100
+ IE T + ++ K+ ++ K+ F K ++++ + P
Sbjct: 82 FAYIERRTVLDSQLTELKKYAVFSKVTFAKDEESILLGVAGAGSRNALAEMFPTLPDAET 141
Query: 101 VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
+ ++ T + +F ERF + A L G + +D + + L I G
Sbjct: 142 TVIQHETTTLLHFAFPAERFLLVTDQATAAQLTETLVGKLQAQLNDSQQWLALEIEAGF- 200
Query: 155 DPNTDFLPSTIF-PHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P D S F P + +L G IS KGCY GQE+V+R ++R ++ + GT
Sbjct: 201 -PVIDSASSAQFIPQATNIQVLEGSISFKKGCYTGQEMVARAKYRGANKRAMYWLAGT-- 257
Query: 213 LPPSGSPILTDDIE 226
S P+ DD+E
Sbjct: 258 --ASSLPVAGDDLE 269
>gi|167562451|ref|ZP_02355367.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia oklahomensis EO147]
gi|167569634|ref|ZP_02362508.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia oklahomensis C6786]
Length = 348
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL + +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 IL-----EIDRSKRDSLI------------DKLL---------------FYKLRSNVIIE 93
+L + KR S+ D L+ F L V +
Sbjct: 101 LLVSKDVQPAAQKRLSMFVLRAKAKLADASDALVAIGFAGDVRAALSGVFDALPDGVHTK 160
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152
+ G ++ + +I R + D L ++++ + + ++R
Sbjct: 161 VDAPAGALIRLPDAAGRARYLWIGTRAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
I P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R
Sbjct: 220 ITQPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRR 266
>gi|154338439|ref|XP_001565444.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062493|emb|CAM42355.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 397
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 35/162 (21%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
S + Y L + GI + + P + +D L G+S KGCY+GQE+ R
Sbjct: 230 SSVDPYTTLLYSRGIGE-GPGVFKNKSLPFEGNLDFLKGVSFHKGCYLGQELTHRTHVML 288
Query: 199 IIRKR-------------PMIITGTDDLPPSGSPILTDDIEIGT---------LGVV--- 233
+ RKR P + T TDD G+ T +EIG +GVV
Sbjct: 289 VTRKRTVPLHFGPTSGGPPAVSTTTDD----GAVATTRPVEIGEPLYSAAKEKIGVVTGV 344
Query: 234 ---VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
VG L + +DK H + G+ L G + P W+
Sbjct: 345 CGQVGVGLLRLRYVDKATHTV-PGLQLK-DGTPAQTHLPDWW 384
>gi|186475806|ref|YP_001857276.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
gi|184192265|gb|ACC70230.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
Length = 349
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 30/227 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I G A FL + +T D L AR + +P+G++L FL+ E
Sbjct: 42 LPQFGVIDATGDDAASFLHSQLTNDTQHLDAATARLAGYCSPKGRLLASFLVWCSGESIR 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+L + + + ++ +L + LR+ + + + + + + S D
Sbjct: 102 ML-VSKDVQPAVQKRLSMFVLRAKAKLSDASGDTLAIGLAGDVRKALSGIFDAIPDGVHV 160
Query: 119 ----------RFSIADVLLHRTW-GHNEKIASDIKTYHE--LRINHGIVD--------PN 157
R A L W G ++ + + R++ G+ D P
Sbjct: 161 KVDGPAGSLVRVPDAAGRLRYVWVGPKAEVEACLPALETKLRRVSPGVWDWLDIRAGEPR 220
Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
T + P D+L G++ KGCY GQEVV+R Q+R I++R
Sbjct: 221 ITQRVVEQFVPQMINFDVLGGVNFRKGCYPGQEVVARSQYRGTIKRR 267
>gi|221198168|ref|ZP_03571214.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
gi|221208341|ref|ZP_03581344.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221171754|gb|EEE04198.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221182100|gb|EEE14501.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
Length = 310
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 46/280 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
L+ I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 62
Query: 65 -----------------FILE-----IDRSK-----------RDSLIDKLLFYKLRSNVI 91
F+L D S+ RD+L +F L V
Sbjct: 63 LLVSKDIQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDAL--SGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ +I R + D L G ++ + + ++R
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGE 179
Query: 152 G-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--I 207
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 180 PRITQPVVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHV 234
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 235 AADTDTMHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|71899417|ref|ZP_00681576.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|71730826|gb|EAO32898.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
Length = 305
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + +++ G + F A ++D L SA LTP+G++ F + + E+
Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121
+L + + + +L Y R V I ++ I T + ++ +D
Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELD 153
Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174
++ + L R ++ + + + G+ P D + P +D
Sbjct: 154 VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V
Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVRSAEGDIGQVASVA 270
Query: 235 GKKALAIARID 245
ALA+ ID
Sbjct: 271 EGLALAVLPID 281
>gi|54310198|ref|YP_131218.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9]
gi|81615002|sp|Q6LMR1|YGFZ_PHOPR RecName: Full=tRNA-modifying protein ygfZ
gi|46914639|emb|CAG21416.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9]
Length = 329
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I + G +LQ +T DV++LP + A +GK+ F +
Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPINASIFGAHCDAKGKMRTIFRLFNH 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116
E L+ +S + + +L Y + S V IE + LS Q F
Sbjct: 84 NEGYGFLQ-RKSVMEIQLPELKKYAVFSKVDIEASSDVLLGLSGEQAQAVVEQHFPGDGD 142
Query: 117 -------------DER--FSIADVLLHR-----TWGHNEKIASDIKTYHELRINHGIVDP 156
D+R F+IA + HN SD + + + I P
Sbjct: 143 VRVITAGTAIKVDDDRWLFAIAPEQAEQLINTLVETHNNVQLSDSTLWDLYDVLYAI--P 200
Query: 157 NTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D + + F P + ++GIS KGCY GQE V+R ++R I ++ I+TG
Sbjct: 201 RIDAVTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTG 254
>gi|293611027|ref|ZP_06693326.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826679|gb|EFF85045.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 240
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 31/214 (14%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + K+ ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKMNPESFEIVVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q G V N + F+ + + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNHQTEFTTAETDISEWQKQAIMTGQAWIT 129
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 130 Q-------ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ + + ++ GT + P S + L +D+E+
Sbjct: 165 LWFKAKPKHWLHLVQGTGEAPASATQ-LNNDVEV 197
>gi|28198265|ref|NP_778579.1| hypothetical protein PD0348 [Xylella fastidiosa Temecula1]
gi|182680902|ref|YP_001829062.1| putative aminomethyl transferase [Xylella fastidiosa M23]
gi|28056335|gb|AAO28228.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631012|gb|ACB91788.1| putative aminomethyl transferase [Xylella fastidiosa M23]
Length = 305
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + +++ G + F A ++D L SA LTP+G++ F + + E+
Sbjct: 34 LPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENEL 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFS 121
+L + + + +L Y R V I ++ I T + ++ +D
Sbjct: 94 LLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELD 153
Query: 122 IADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174
++ + L R ++ + + + G+ P D + P +D
Sbjct: 154 VSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDG 211
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V
Sbjct: 212 LNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVA 270
Query: 235 GKKALAIARID 245
ALA+ ID
Sbjct: 271 EGLALAVLPID 281
>gi|50288779|ref|XP_446819.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637641|sp|Q6FSH5|CAF17_CANGA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49526128|emb|CAG59750.1| unnamed protein product [Candida glabrata]
Length = 497
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSR 193
EK+ D + + ++ +G +D + P ++ P + D N +S KGCY+GQE+ +R
Sbjct: 303 EKLEKDSSFFKQCKLQYGFLDGSDAIQPDSLMPLELNFDYFPNTVSNNKGCYVGQELTAR 362
Query: 194 IQHRNIIRKR 203
I+RKR
Sbjct: 363 TYSTGILRKR 372
>gi|332284309|ref|YP_004416220.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7]
gi|330428262|gb|AEC19596.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7]
Length = 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P T+ +DL++G+S TKGCY GQEVV+R +R +++R
Sbjct: 216 FIPQTLN-----LDLIDGVSFTKGCYPGQEVVARSHYRGTVKRR 254
>gi|270356904|gb|ACZ80689.1| putative mitochondrial transferase CAF17 protein [Filobasidiella
depauperata]
Length = 374
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 140 DIKTYHELRINH---GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
DI T E +++ G+ + + +P P ++ MD+ G+ KGCY+GQE+ R H
Sbjct: 182 DISTADEYKLHRMLLGVPEGPEEIVPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYH 241
Query: 197 RNIIRKR 203
RKR
Sbjct: 242 TGATRKR 248
>gi|157960459|ref|YP_001500493.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
gi|157845459|gb|ABV85958.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
Length = 323
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 35/250 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ F+ +T D+ +L R A P+GK+L F ++ F
Sbjct: 24 LSHLGLISVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAKDDTLF 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-------NQEHTFSNSSF--I 116
I+ +D+L L +L+ + + + +W Q + + + F +
Sbjct: 84 IM----MPKDTL--ALDLPQLQKYAVFSKAELADISDAWLLLGVAGEQANAWLTAQFGEL 137
Query: 117 DERFSIAD--VLLHRTW---------------GHNEKIASDIKTYHELRINHGIVDPNTD 159
++ D ++LH E+ D + L I G PN
Sbjct: 138 SAELTLIDGGIILHDAGRYIVAIDKTHADAFIAKIEQPIFDASAWQTLEILAGY--PNLG 195
Query: 160 FLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
F P + +NGIS KGCY+GQE V+R+++R ++ I++G P +
Sbjct: 196 ASHQGQFVPQMCNVQAVNGISFNKGCYMGQETVARMKYRGGNKRALYIVSGKVSAPLTAD 255
Query: 219 PILTDDIEIG 228
L +E G
Sbjct: 256 SQLEIALEDG 265
>gi|288941015|ref|YP_003443255.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180]
gi|288896387|gb|ADC62223.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180]
Length = 342
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 37/242 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I G A FLQ +T D+ L + SA + +G+IL F +++E T
Sbjct: 38 LSHLGLIAARGADAASFLQGQLTNDIRELSASHTQLSAHCSQKGRILTLFRALRLDE-TI 96
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPI-------------N 98
L+ + I +L + LR+ V + E P N
Sbjct: 97 YLQTPMERVAESIQRLSRFILRAKVTLNDASDELIRIGLAGETAPALLAAQGLPVPERDN 156
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGH--NEKIASDIKTYHELRINHGIV 154
G+V S + RF + L W + ++ + L I G+
Sbjct: 157 GLVQS--DDVAVIRIPGPTPRFELIGPFEPLRALWEALAPQAAPANATDWTRLDIQAGL- 213
Query: 155 DPNT-DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
PN D T P + ++G+S KGCY GQEVV+R+Q +++R + D
Sbjct: 214 -PNVYDRTVETFVPQMLNLQRIDGVSFNKGCYTGQEVVARMQFLGKLKRRMYLAEVERDA 272
Query: 214 PP 215
PP
Sbjct: 273 PP 274
>gi|254467880|ref|ZP_05081286.1| glycine cleavage T protein [beta proteobacterium KB13]
gi|207086690|gb|EDZ63973.1| glycine cleavage T protein [beta proteobacterium KB13]
Length = 278
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 34/246 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64
L + S I++ G+ + FLQ +T DV K S + P+G++ + I ++ + ++
Sbjct: 6 LDHYSIIEISGEDHLDFLQGQLTNDVKKNEKKFIY-SGMCNPKGRLFAFLRILRVPDLNS 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122
L S D++ +L + LRS V+I+ + F ID+ I
Sbjct: 65 TFLVTPSSLADAIQKRLTMFVLRSKVVIQ------------KAENFHLLGIIDDSPKIYI 112
Query: 123 -ADVLLHRTWGHNEK--IASDIKTYHELRINHGIVD------PNTDF-LPSTI------- 165
D L+ N I +D +++++ H D + +F +P +
Sbjct: 113 PTDQQLNLPDQTNRSVIILNDSNLFNQIKNEHSFEDISMWIKKDIEFGIPEVMEKTQEKF 172
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDD 224
H +DL++ ++ KGCY GQE+V+R + + R L G +L +D
Sbjct: 173 LAHTCNLDLIDAVNFKKGCYTGQEIVARTHYLGKPKHRSFYGVINSKLSFDYGEQVLEND 232
Query: 225 IEIGTL 230
IGT+
Sbjct: 233 RSIGTV 238
>gi|238786189|ref|ZP_04630139.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970]
gi|238712906|gb|EEQ04968.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970]
Length = 330
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 46/260 (17%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59
++ + L + + + + G + +LQ +TAD+ LP A +GK+ L +
Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104
E FI RS D+ + +L Y + S V+I QP V+L
Sbjct: 80 GEGLAFIER--RSLLDNQLSELKKYAVFSKVVITAQP-EAVLLGIAGAQARAALAELFAE 136
Query: 105 --NQEH--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148
+ EH T + S ERF + A L+ + + ++ + + L
Sbjct: 137 LPDAEHPVLQQGSSTLLHFSLPAERFLLVTDTEQAQQLIDKL--ADSAQLNNSQQWLALD 194
Query: 149 INHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
I G I+D +T + P + LNGIS +KGCY GQE+V+R ++R ++
Sbjct: 195 IEAGFPIIDADTS---AQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYW 251
Query: 207 ITGTDDLPPSGSPILTDDIE 226
+ G S P +D+E
Sbjct: 252 LAGQ----ASRVPAAGEDLE 267
>gi|323308509|gb|EGA61754.1| Iba57p [Saccharomyces cerevisiae FostersO]
Length = 497
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
>gi|317406758|gb|EFV86898.1| hypothetical protein HMPREF0005_06002 [Achromobacter xylosoxidans
C54]
Length = 152
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P T+ +DL+ G+S TKGCY GQEVV+R +R +++R
Sbjct: 33 FIPQTVN-----LDLIQGVSFTKGCYPGQEVVARSHYRGTVKRR 71
>gi|150864230|ref|XP_001382966.2| hypothetical protein PICST_40677 [Scheffersomyces stipitis CBS
6054]
gi|158513692|sp|A3LNW4|CAF17_PICST RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|149385486|gb|ABN64937.2| CCR4 transcriptional complex component [Scheffersomyces stipitis
CBS 6054]
Length = 469
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+G+ + + T+ P + +D NG+SL KGCY+GQE+ R + +IRKR M
Sbjct: 275 NGLFEGQDADIDQTLLPFECNLDYTNGLSLDKGCYVGQELTIRTYNNGVIRKRIM 329
>gi|134094618|ref|YP_001099693.1| hypothetical protein HEAR1394 [Herminiimonas arsenicoxydans]
gi|133738521|emb|CAL61566.1| putative Glycine cleavage T protein (aminomethyl transferase)
[Herminiimonas arsenicoxydans]
Length = 352
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 41/228 (17%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
I G A FL + +T DV L AR + +P+G++L LI K D +L++
Sbjct: 52 LIAASGDEAAHFLHSQLTNDVEHLDAGAARLAGYCSPKGRLLASLLIWKTA-DGIMLQLP 110
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------NQEHTFSNSSFIDERFS 121
R + S+ +L + LR+ + N V+L Q ++ D+ S
Sbjct: 111 RELQASVQKRLQMFVLRAKARLIDATENHVMLGLAGPAASKVLQQWFPVLPAAIYDKAES 170
Query: 122 IADVLLHR--TWGHNE-----KIASDIKTYHEL---------------RINHGI----VD 155
A L+ +G A ++ + +L I+ G+ +
Sbjct: 171 AAGTLIRHPDAFGTARYQWITTAAQAVEAWPQLTKVLQAAGAAAWQLAEIDSGVPHISIA 230
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I +L+ G++ KGCY GQE+V+R Q+ +++R
Sbjct: 231 TQEKFVPQMIN-----FELIGGVNFRKGCYPGQEIVARSQYLGKLKRR 273
>gi|320103031|ref|YP_004178622.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
gi|319750313|gb|ADV62073.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
Length = 388
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 147 LRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ---HRNI 199
LRI G+ VD D LP F DA I+ TKGCY+GQE V+R+ H N
Sbjct: 229 LRIEIGLPRFGVDLTADHLPQE-FDRDA-----RAINFTKGCYLGQETVARLDALGHVNK 282
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ + + LPPSG+ ++ DD +GTL V
Sbjct: 283 MLRHLKFHSVNAPLPPSGTTLMKDDRPVGTLTSVA 317
>gi|323304291|gb|EGA58065.1| Iba57p [Saccharomyces cerevisiae FostersB]
Length = 497
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
>gi|107028926|ref|YP_626021.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
gi|105898090|gb|ABF81048.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
Length = 344
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 107/279 (38%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I V G A FL + +T D+ L A+ S +P+G++L FL + D
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSAQLSGYCSPKGRLLASFLTWRAGHDVR 96
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92
+L + + + ++ +L + LR+ V +
Sbjct: 97 LL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPDGVHV 155
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEP 214
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|307579370|gb|ADN63339.1| putative aminomethyl transferase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 267
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 14/246 (5%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+++ G + F A ++D L SA LTP+G++ F + + E+ +L +
Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFID--ERFSIADVL 126
+ + +L Y R V I ++ I T + ++ +D ++ +
Sbjct: 61 DGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELDVSGIT 120
Query: 127 LHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGIS 179
L R ++ + + + G+ P D + P +D LN S
Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGL--PRLDASQRDQWTPQQIGLDGLNAYS 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
+ KGCY GQE+V+R ++R ++ + P G + + + +IG + V AL
Sbjct: 179 IRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVAEGLAL 237
Query: 240 AIARID 245
A+ ID
Sbjct: 238 AVLPID 243
>gi|239501762|ref|ZP_04661072.1| hypothetical protein AbauAB_05561 [Acinetobacter baumannii AB900]
gi|260557200|ref|ZP_05829416.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606]
gi|260409306|gb|EEX02608.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606]
Length = 240
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + K ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q G V N FS++ + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
IA T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT D P + L +D+E+ G + +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216
>gi|254796700|ref|YP_003081536.1| aminomethyl transferase family protein [Neorickettsia risticii str.
Illinois]
gi|254589932|gb|ACT69294.1| aminomethyl transferase family protein [Neorickettsia risticii str.
Illinois]
Length = 310
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ Y +RI I + + P+ IFP + MD KGCY+GQEV+SR + +N I
Sbjct: 189 EEYQRIRIMSKISEAGKELKPN-IFPLEYAMDY--AFDFNKGCYVGQEVISRFRIKNFIE 245
Query: 202 KRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAI 241
+ + G + G I D +G LA+
Sbjct: 246 RALFCLQGEEGASLEEGDKIYLGDDMVGCFSSCCQNYGLAV 286
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILE 68
+F + G+ FLQ IIT +V TL A G ILTP+G+++ + K +T +LE
Sbjct: 9 NFYSISGERVKAFLQGIITCNVETLE-DCAYG-LILTPKGRLICDLFVYKCSTETELLLE 66
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE 93
+ ++L+ L Y + + I+
Sbjct: 67 TNHCNTEALLSVLDLYNFKRGITIQ 91
>gi|88858214|ref|ZP_01132856.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas tunicata D2]
gi|88819831|gb|EAR29644.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas tunicata D2]
Length = 304
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T+ L I HG NT + + P + + GIS TKGCY GQE V+R+++ ++
Sbjct: 164 TWQSLAILHGEPSLNTSAVGEYV-PQMVNLQAIGGISFTKGCYTGQETVARMKYLGKNKR 222
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR-IDKVDHAIKKGMALTV 259
II D SPI +D++E LG + IA D +D KK +AL V
Sbjct: 223 AMYIIQAQGD-----SPINSDEVE-QQLGENWRRAGHIIASAFDPID---KKAVALVV 271
>gi|332160499|ref|YP_004297076.1| putative global regulator [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607033|emb|CBY28531.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664729|gb|ADZ41373.1| putative global regulator [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863456|emb|CBX73575.1| tRNA-modifying protein ygfZ [Yersinia enterocolitica W22703]
Length = 330
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 47/257 (18%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59
++ + L + + + G + +LQ +TAD+ LP A +GK+ L +
Sbjct: 20 LTLISLDDWVLVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------- 104
E FI RS D+ + +L Y + S V+I QP + V+L
Sbjct: 80 GEGLAFIER--RSVLDNQLSELKKYAVFSKVVIAAQP-DAVLLGVAGAQAKAALAEVFAE 136
Query: 105 --NQEH--------TFSNSSFIDERF----------SIADVLLHRTWGHNEKIASDIKTY 144
N +H T S ERF + + L R +N K +
Sbjct: 137 LPNADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKLTDRAQFNNSK------QW 190
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
L I G +TD + P + LNGIS +KGCY GQE+V+R ++R ++
Sbjct: 191 LALDIEAGFPIIDTDS-SAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRAL 249
Query: 205 MIITG-TDDLPPSGSPI 220
+ G + +P +G +
Sbjct: 250 YWLAGHANRVPAAGEDL 266
>gi|237748463|ref|ZP_04578943.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
gi|229379825|gb|EEO29916.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
Length = 333
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 108/281 (38%), Gaps = 42/281 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L + + G+ A+ F+ ++ D+ L AR +A PQG++L F K
Sbjct: 21 VLLKQTGLLALEGEDAVSFIHGQLSNDIEHLGSSQARLAAYCNPQGRMLALFHAWKSSGK 80
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNS 113
+ L + +L +L Y LR+ V + + N +L E T +
Sbjct: 81 VW-LTVPLDILPALQKRLQMYVLRAKVTLSDESGNMAILGIGGEKGGEALSKWFETLPSE 139
Query: 114 SF------------IDERFSIADVLL----HRTWGHNEKIASDIKTYHELRINHGIVDPN 157
F + + F LL R +++S + E G +
Sbjct: 140 PFGKTENEFGVLVRVADAFGFPRYLLTIAEKRLQVVESELSSTLSVCDESGWTMGDIKAG 199
Query: 158 TD--FLP--STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PMIITGT 210
LP P ++ G+S KGCY GQEV++R Q++ +++R M+
Sbjct: 200 VPQITLPVQDRFIPQMVNLEQAGGLSFKKGCYPGQEVIARSQYKGTVKRRMFHGMVELPF 259
Query: 211 DDLPP------SGSPILTDDIEIGTLGVVVGKKALAIARID 245
+D PP +G+ I+ D ++ G +V R+D
Sbjct: 260 EDNPPIDVNMTAGANIVDSDGQV--CGTIVSSARRDNNRVD 298
>gi|331005217|ref|ZP_08328610.1| Folate-dependent protein for Fe/S cluster synthesis [gamma
proteobacterium IMCC1989]
gi|330420960|gb|EGG95233.1| Folate-dependent protein for Fe/S cluster synthesis [gamma
proteobacterium IMCC1989]
Length = 327
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 118 ERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTD--FLPSTIFPHDAL 171
+RFS IA + NE I D + + E++I +GI + NT F P I H+
Sbjct: 168 KRFSTYIASEPMQNEVMSNEGILDD-EYWDEVKIKNGIAGIHANTSGVFTPHAINYHN-- 224
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ N +S +KGCY GQEVV+R+Q+ ++++ + T +P +
Sbjct: 225 --MGNAVSFSKGCYTGQEVVARMQYLGNLKRQLYLFTSKTTIPTT 267
>gi|261400643|ref|ZP_05986768.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
gi|269209550|gb|EEZ76005.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
Length = 288
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 32/238 (13%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVITNMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IAD 124
++ I +L + LR+ V+ EI G L+ + E + +F E S +
Sbjct: 72 LLEATIKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAFTAECVSDGICSV 131
Query: 125 VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
VL HR H + A HE+R + + T A+ +L
Sbjct: 132 VLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQML 183
Query: 176 N-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
N G+ KGCY GQE+++R Q+R +++ +++G + +G + D E+G
Sbjct: 184 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEVG 240
>gi|134295923|ref|YP_001119658.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
gi|134139080|gb|ABO54823.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
Length = 344
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 105/283 (37%), Gaps = 52/283 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL--------- 56
L+ I V G A FL +T D+ L AR + +P+G++L FL
Sbjct: 37 LAQFGVIDVAGDDAATFLHGQLTNDIEHLDAASARVAGYCSPKGRLLASFLAWREGHGVR 96
Query: 57 -------------------------ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91
+S + ++ RD+L +F L V
Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRAKAKLSDASDAVAVVGFSGDVRDAL--SGVFDALPDGVH 154
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-----HE 146
+++ GV++ +I R + D + G ++ + + E
Sbjct: 155 VKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALAGTLPVVSPAVWDWLDVRAGE 213
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI +V+ F+P + D++ ++ KGCY GQEVV+R Q+R I++R +
Sbjct: 214 PRITQPVVE---QFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTAL 265
Query: 207 --ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 266 AHVAGETDSVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|254252183|ref|ZP_04945501.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
gi|124894792|gb|EAY68672.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
Length = 344
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 104/267 (38%), Gaps = 46/267 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 96
Query: 65 -----------------FILE-----IDRSK-----------RDSLIDKLLFYKLRSNVI 91
F+L D S+ RD+L +F L V
Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDTL--SRIFDALPDGVH 154
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ GV++ +I R + D + ++ + + ++R
Sbjct: 155 VKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALGDALPVVSPAVWDWLDVRAGE 213
Query: 152 G-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--I 207
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 214 PRITQPTVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHV 268
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV 234
G D+ +G + D G++V
Sbjct: 269 AGETDVAHAGVELFHGDDPGQPCGMIV 295
>gi|184159392|ref|YP_001847731.1| aminomethyltransferase related to GcvT [Acinetobacter baumannii
ACICU]
gi|332876232|ref|ZP_08444007.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059]
gi|183210986|gb|ACC58384.1| predicted aminomethyltransferase related to GcvT [Acinetobacter
baumannii ACICU]
gi|322509304|gb|ADX04758.1| aminomethyltransferase [Acinetobacter baumannii 1656-2]
gi|323519331|gb|ADX93712.1| GcvT-like aminomethyltransferase [Acinetobacter baumannii
TCDC-AB0715]
gi|332735504|gb|EGJ66556.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059]
Length = 240
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + K ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFEIIVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q G V N FS++ + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIMTGQAW-- 127
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
IA T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT D P + L +D+E+ G + +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGDSPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216
>gi|221215089|ref|ZP_03588056.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
gi|221165025|gb|EED97504.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
Length = 310
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 42/272 (15%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
I V G A FL + +T D+ L AR S +P+G++L FL + D +L
Sbjct: 9 IDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVRLLVSKD 68
Query: 68 -EIDRSKRDSLI-------------------------DKL--LFYKLRSNVIIEIQPING 99
+ KR S+ D L +F L V +++ G
Sbjct: 69 IQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDGPAG 128
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPNT 158
++ +I R + D L G ++ + + ++R I P
Sbjct: 129 ALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEPRITQPVV 187
Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP 215
+ F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + D
Sbjct: 188 EQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDAVR 242
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+G + D G++V A +D +
Sbjct: 243 AGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|304387443|ref|ZP_07369634.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304338536|gb|EFM04655.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 304
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86
Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124
++ I +L + LR+ V+ EI ++ + + + S + ++D
Sbjct: 87 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 146
Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T A+ +
Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 256
>gi|241953047|ref|XP_002419245.1| mitochondrial protein, putative [Candida dubliniensis CD36]
gi|223642585|emb|CAX42834.1| mitochondrial protein, putative [Candida dubliniensis CD36]
Length = 469
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
S++ P + +D +NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 291 SSLLPFECNLDYINGLSLDKGCYVGQELTIRTFNNGVIRKR 331
>gi|304413501|ref|ZP_07394974.1| aminomethyltransferase folate-binding domain-containing
hypothetical protein [Candidatus Regiella insecticola
LSR1]
gi|304284344|gb|EFL92737.1| aminomethyltransferase folate-binding domain-containing
hypothetical protein [Candidatus Regiella insecticola
LSR1]
Length = 325
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 52/258 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + +LQ +TADV + + +A P+GK+ + EE
Sbjct: 25 LDDWVLVTITGVDRVNYLQGQVTADVAAMTAEQHIMTAHCDPRGKMWSNLRLFHREEGLV 84
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------------NQEH 108
+E RS D+ + +L Y + S V I + V+L N +H
Sbjct: 85 FIE-RRSVLDNQLKELKKYAVFSKVNISVD-TKAVLLGVAGLTARETLATLFSTLPNTKH 142
Query: 109 --------TFSNSSFIDERFS-IADVLLHRTW-----------GHNEKIASDIKTYHELR 148
T + + ERF + D + W N+ +A DI+
Sbjct: 143 PVVQQGITTLLHFTQPTERFLLVTDAFQAQQWIEILRSRTQFNNSNQWMALDIQA----- 197
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I+D T L P + L GIS TKGCY GQE V+R Q+R ++ +
Sbjct: 198 -GFPIIDEKTSAL---FIPQATNIQTLGGISFTKGCYTGQETVARAQYRGANKRALYWLA 253
Query: 209 GTDDLPPSGSPILTDDIE 226
G + P+ DD+E
Sbjct: 254 GN----ANRVPLPGDDLE 267
>gi|226951689|ref|ZP_03822153.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter
sp. ATCC 27244]
gi|226837554|gb|EEH69937.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter
sp. ATCC 27244]
Length = 240
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T V L +R +AI +G+I I KI ++F L + + +
Sbjct: 13 GVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQDQAE 72
Query: 76 SLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ F K++ I ++ P +NG I FS +
Sbjct: 73 EFAKHIRKFGAFSKMKLEEIGQVFPTVNG----------------IQTDFSTTE------ 110
Query: 131 WGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
+DI T+ I G + T+ L P + + G+ KGCY+GQ
Sbjct: 111 --------TDINTWQVQAIQSGQAWITQTTEHL---FQPQELRLHQREGVHFDKGCYLGQ 159
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
E+V+R+ + + +I G + P + + D + ++ G AL IA+
Sbjct: 160 EIVARLWFKAKPKHWLHLIQGKETTPAPATQLNKDVEVVNSIAFDNGYLALVIAK 214
>gi|161524552|ref|YP_001579564.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189350692|ref|YP_001946320.1| putative aminomethyltransferase [Burkholderia multivorans ATCC
17616]
gi|160341981|gb|ABX15067.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189334714|dbj|BAG43784.1| predicted aminomethyltransferase [Burkholderia multivorans ATCC
17616]
Length = 345
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 40/232 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 38 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 97
Query: 66 IL-----EIDRSKRDSLI-------------------------DKL--LFYKLRSNVIIE 93
+L + KR S+ D L +F L V ++
Sbjct: 98 LLVSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVK 157
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152
+ G ++ +I R + D L G ++ + + ++R
Sbjct: 158 VDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALDGKLPVVSPAVWDWLDVRAGEPR 216
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 217 ITQPVVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRR 263
>gi|322492231|emb|CBZ27505.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 389
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
S Y L + GI + F + P + +D L G+S KGCY+GQE+ R
Sbjct: 221 SSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVML 280
Query: 199 IIRKR--PMIITGTDDLPPS------------------GSPILTDDIE-IGTLGVVVGKK 237
+ RKR P+ PP+ G P+ + E IG + V G
Sbjct: 281 VTRKRTVPLHFGPASVDPPAAGTITDEGAVATTRPVEVGEPLYSSAREKIGEVTGVCGHV 340
Query: 238 ALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
+ + R+ VD A + L + G V+ P W+
Sbjct: 341 GIGLFRLRYVDKATQTVPGLQLKDGTPVRTHLPDWW 376
>gi|307129424|ref|YP_003881440.1| putative folate-dependent regulatory protein [Dickeya dadantii
3937]
gi|306526953|gb|ADM96883.1| predicted folate-dependent regulatory protein [Dickeya dadantii
3937]
Length = 326
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L + + + + G + +LQ +TADV TL A +GK+ + +
Sbjct: 21 ISLDDWALVTLAGPDTVKYLQGQLTADVDTLQAGQHVLCAHCDAKGKMWSNLRLFHYGDG 80
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--------NVII----------EIQPI-------- 97
LE RS RD+ + +L Y + S NV++ + P+
Sbjct: 81 LAYLE-RRSIRDTQLAELKKYAVFSKTTIAADDNVVLLGAVGLDIRAHLAPLFDALPDAD 139
Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHG 152
N VV T + + ERF + + R E ++S +K + L I G
Sbjct: 140 NAVVQ--QPGATLLHLAHPAERFLLV-LDAQRAAALIETLSSSVKLNDSRQWQALDIAAG 196
Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
P D + S F P + L GIS TKGCY GQE+V+R ++R ++ + GT
Sbjct: 197 --QPIIDSVNSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGTG 254
Query: 212 DLPPSGSPILTDDIEI 227
+ +P D++E+
Sbjct: 255 ----AQAPAAGDELEL 266
>gi|238021253|ref|ZP_04601679.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
gi|237868233|gb|EEP69239.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
Length = 285
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 15/220 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L + I+ G A FL + D+ LP A + TP+G+++ LI++
Sbjct: 1 MHTTQLPFFAVIRATGDDAADFLHNQFSNDIKNLPANQACYATYNTPKGRVIAN-LIAQN 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +L + ++++ +L Y LR+ V EI P GV S + S F
Sbjct: 60 TGNEILLALAADLVEAVVKRLKMYVLRAKVQFEILPDWGVAGSLKSNTPPQHPSEPQLSF 119
Query: 121 SI---ADVLLHRTWGHNEKIASDIKTYHELRI----NHGIVDPNTDFLPSTIFPHDALMD 173
+ ++ L T +++ Y H I+ +T +
Sbjct: 120 PVNAQGEIQLPHTGSLKIAPCAELPAYDAAAEAAWQQHEILSGYPWICAAT--SESCVAQ 177
Query: 174 LLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+LN G+ KGCY GQEV++R Q+R +++ I T
Sbjct: 178 MLNQHTIGGVHFRKGCYPGQEVIARAQYRGQVKRGLAIAT 217
>gi|206560330|ref|YP_002231094.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
gi|198036371|emb|CAR52267.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
Length = 344
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 42/272 (15%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------IEED 63
I V G A FL + +T D+ L AR S +P+G++L FL + + +D
Sbjct: 43 IDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHGVRLLVSKD 102
Query: 64 T----------FILEIDRSKRDS------------LIDKL--LFYKLRSNVIIEIQPING 99
F+L D+ + D L +F L V +++ G
Sbjct: 103 VQPAVQKRLSMFVLRAKAKLTDANDTLAVAGFAGDVRDALSGIFDALPDGVHVKVDGPAG 162
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPNT 158
++ +I R + D L G ++ + + ++R I P
Sbjct: 163 TLIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDWLDVRAGEPRITQPAV 221
Query: 159 D-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP 215
+ F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + G D
Sbjct: 222 EQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETDTVH 276
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+G + D G++V A +D +
Sbjct: 277 AGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|241668459|ref|ZP_04756037.1| hypothetical protein FphipA2_06811 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876992|ref|ZP_05249702.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843013|gb|EET21427.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 248
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 36/227 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62
+N ++V G I FLQ ++T+D+ L + ++T +G+I+ + +
Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLS---DDNNLLMTTFANLKGRIISLCFVKYVSS 62
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120
+L ++++ D+L+ L Y + S V + N++++ F+++ F++
Sbjct: 63 QKLLLSVEQTVIDNLLSWLKKYGMFSKVSFAV----------NEDYSLFFTDNGFLNHDI 112
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGIS 179
+ D L ++ E+I I ++L I I N + FLP+ + L ++ +S
Sbjct: 113 LVKDAL--KSEISYEQIQK-INILNKLAI---IDQANVEKFLPAEL----DLDNIEKVVS 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----DLPPS-GSPI 220
TKGCY+GQEV++R+ ++ ++K ++ DL S G P+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLKTSDGKPL 209
>gi|169632509|ref|YP_001706245.1| hypothetical protein ABSDF0627 [Acinetobacter baumannii SDF]
gi|169151301|emb|CAP00005.1| conserved hypothetical protein [Acinetobacter baumannii]
gi|193078266|gb|ABO13230.2| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978]
Length = 240
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 39/233 (16%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + K ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSIADVLLHRTWGH 133
+ Y S + + Q G V N FS++ + ++ + W
Sbjct: 73 EFAKHIKKYGAFSKMTLSEQ---GAVFPKVVNGHTEFSSTETDISEWQKQAIVTGQAW-- 127
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
IA T HE + P + + G++ KGCY+GQE+V+R
Sbjct: 128 ---IAQ--ATEHEFQ------------------PQELRLHQREGVNYDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+ + + ++ GT D P + L +D+E+ G + +VV K A
Sbjct: 165 LWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVEVVNSTQTTDGYIALVVAKPA 216
>gi|149192318|ref|ZP_01870526.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1]
gi|148833851|gb|EDL50880.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1]
Length = 323
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ +++ G +LQ +T DV++L + A +GK+ F + IE
Sbjct: 26 LNRWGALEMTGDDRKSYLQGQVTCDVVSLEQNQSTFGAHCDAKGKVWSAFRLCHIENGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV--IIEIQPINGVVLSWNQE---HTFSNSSFI---- 116
+++ +S + + +L Y + S V II +P+ GV+ + Q+ F S +
Sbjct: 86 MIQ-PQSALEKELTELKKYAVFSKVELIISTKPLIGVMGTSAQQWINQQFPTSGAVRQNK 144
Query: 117 --------DERFSI---------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
DER+ + W +A + T ++ I++
Sbjct: 145 GSTAIQINDERWMLLVDGDLQSLLSSDSELLW-----VAESLWTKFDIEQGLPILEAEQQ 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L+GIS KGCY GQE V+R ++R I ++ + G D SP
Sbjct: 200 ---NQHIPQALNLQALDGISFNKGCYTGQETVARAKYRGINKRMLANVRGLLD-----SP 251
Query: 220 ILTDDI 225
+ DDI
Sbjct: 252 LSDDDI 257
>gi|254671408|emb|CBA08895.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 304
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IA 123
++ + +L + LR+ + EI G L + E + +F E S +
Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECVSDGICS 146
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A HE+R + + T A+ +
Sbjct: 147 VVLPHRGILHIAPETALPPYDAAAESAWKLHEIRSGYPWICAATK--------ETAVAQM 198
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +GS + D E G
Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAADGEEAG 256
>gi|89901035|ref|YP_523506.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
gi|89345772|gb|ABD69975.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
Length = 317
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 106/284 (37%), Gaps = 30/284 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I+V G+ A FL +T D L AR +A + +G++ F+ K
Sbjct: 19 LTHLGVIRVEGEDAAKFLHGQLTQDFSLLGLSEARLAAFCSAKGRMQASFIGFKRSPTDI 78
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQE--HTFSNSSFI 116
+L R + + ++ + LR+ + + + G L E + S++
Sbjct: 79 LLVCSRDILAATLKRMSMFVLRAKAKLSDATADFAVYGLAGTALQNTIETIAGYEGSAWA 138
Query: 117 DERFSI--------ADVLLHRTW----GHNEKIASDIKT----YHELRINHGIVDPNTDF 160
F AD W G A+ + + E+R G + T
Sbjct: 139 KTDFGPISLVNLYPADGTARALWVAPVGAPAPTAAVMTAEQWAWSEVR---GGIATITQT 195
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+ P + + G+S KGCY GQEVV+R Q R +++R + L +G +
Sbjct: 196 VVEAFVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYLAHSESAL-NAGDEL 254
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKKGMALTVHGVR 263
D G+VV A D V I A VH +R
Sbjct: 255 FAPDDASQPCGMVVQAAAAPTGGCDAIVSMQITAFAAGGVHAIR 298
>gi|167586963|ref|ZP_02379351.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ubonensis Bu]
Length = 344
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 44/284 (15%)
Query: 2 SSVYLSNQSF--IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+ Y+ F I V G A FL +T D+ L AR + +P+G++L F+ +
Sbjct: 31 AGAYMPLPQFGVIDVAGDDAATFLHTQLTNDIEHLDAASARLAGYCSPKGRLLASFVAWR 90
Query: 60 IEEDTFIL-----EIDRSKRDSLI------------DKL---------------LFYKLR 87
D +L + KR S+ D L +F L
Sbjct: 91 SGHDVRLLVSKDVQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRAALSGIFDALP 150
Query: 88 SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
V ++I G ++ +I R + D L G ++ + + ++
Sbjct: 151 DGVHVKIDGPAGALIRMPDAAGKRRYLWIGPRAEV-DARLAALDGKLPAVSPAVWDWLDI 209
Query: 148 RINHG-IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R + P + F+P I D++ ++ KGCY GQE+V+R Q+R I++R
Sbjct: 210 RAGEPRVTQPAVEQFVPQMIN-----FDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTA 264
Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G+VV A +D +
Sbjct: 265 LAHAAGDTDAVRAGIELFHSDDPSQPCGMVVNAAAAPAGGVDAL 308
>gi|91783550|ref|YP_558756.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia xenovorans LB400]
gi|91687504|gb|ABE30704.1| Putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia xenovorans LB400]
Length = 361
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 32/271 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I G A FL +T D L AR + + +G++L FL + DT
Sbjct: 54 LTQFGVIDATGDDAASFLHGQLTNDTQHLDAASARLAGYCSAKGRLLASFLTWR-SGDTI 112
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 113 RLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPDGVHV 172
Query: 118 -------ERFSIADVL--LHRTW-GHNEKIASDIKTYHEL--RINHGIVD--------PN 157
+ D L L W G +I S + E R++ + D P
Sbjct: 173 KVDGAAGSLIRVPDALGRLRYLWVGPKAQIESQLALLDETLKRVSPAVWDWLDIRAGEPR 232
Query: 158 -TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLP 214
T + P D+L ++ KGCY GQEVV+R Q+R I++R + T G D
Sbjct: 233 ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLATVAGEPDTV 292
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+G+ + D G+VV + +D
Sbjct: 293 RAGAELFHSDDPGQPCGMVVNAASAPEGGVD 323
>gi|254230558|ref|ZP_04923925.1| protein YgfZ [Vibrio sp. Ex25]
gi|262393261|ref|YP_003285115.1| glycine cleavage T-protein [Vibrio sp. Ex25]
gi|151936916|gb|EDN55807.1| protein YgfZ [Vibrio sp. Ex25]
gi|262336855|gb|ACY50650.1| glycine cleavage T-protein [Vibrio sp. Ex25]
Length = 322
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257
>gi|300712072|ref|YP_003737886.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
gi|299125755|gb|ADJ16094.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
Length = 358
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ L N + KGC++GQEV+SR+++R +R ++ +LP +G+ +L DD +G +
Sbjct: 244 VLGLRNAVDFEKGCFVGQEVISRVENRGQPSQR-LVGLRCSELPAAGTAVLGDDETVGEI 302
Query: 231 GVVVGKKALA 240
V +L+
Sbjct: 303 TRAVQSPSLS 312
>gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1]
Length = 373
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ LTKGCY GQE V+R+ + +R +++ G ++LP +G P+ DD +G +G VV
Sbjct: 247 VHLTKGCYRGQETVARVANLGRPPRRQVLLLLDAGDEELPRTGDPVRRDDRTVGRVGTVV 306
Query: 235 -----GKKALA-IARIDKVDHAIKKGM 255
G ALA + R VD + G+
Sbjct: 307 QHHELGPVALALVKRSVPVDAELTAGV 333
>gi|320105946|ref|YP_004181536.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
gi|319924467|gb|ADV81542.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
Length = 322
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG---TLGVVVGKKA 238
KGCY+GQE+V RI+ R + + + D+P G+P+ ++ +G ++ + G +
Sbjct: 224 KGCYLGQEIVERIRSRGNVHRTFHAFLLSGDIPAPGTPLTAEEKPVGEFTSIATLPGGRT 283
Query: 239 LAIARIDKVDHAIKKGMALTVHG 261
LA+ I + A+ + +ALT G
Sbjct: 284 LALGYIRR--EALDRNLALTFPG 304
>gi|91227863|ref|ZP_01262036.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01]
gi|91188373|gb|EAS74669.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01]
Length = 322
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257
>gi|148652133|ref|YP_001279226.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter
sp. PRwf-1]
gi|148571217|gb|ABQ93276.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter
sp. PRwf-1]
Length = 247
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 42/257 (16%)
Query: 6 LSNQSF--IKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIE 61
+SN SF I + G A FLQ IT +V LT Y+ A AI +G+I I K +
Sbjct: 1 MSNLSFKQITLQGDDAAKFLQGQITVNVNRLTASYQPA---AIANLKGRIEFGLWIKKQD 57
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ F + I L L F K + I+I P G Q TFS ++
Sbjct: 58 DKQFDIVISSDCLAPLQAHLKKFGAFSKFTISEPIDIYPYVGNEAGQAQP-TFSENA--- 113
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN 176
+E+ +D + N+ I + T+F P + +
Sbjct: 114 ----------------DEQNMTDWMSASIATGNYWITEAT-----QTLFQPQELRLHQRG 152
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT---LGVV 233
G+ KGCY+GQEV++RI + + + GT P +G + D I++ L
Sbjct: 153 GVDYDKGCYLGQEVIARIYFKAAPKAFLHRVKGTGAAPKAGESL--DKIQVVNAIDLADG 210
Query: 234 VGKKALAIARIDKVDHA 250
G +AL +AR ++++ A
Sbjct: 211 SGYEALVVARPEQLEQA 227
>gi|269965775|ref|ZP_06179872.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829643|gb|EEZ83880.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 322
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPI 257
>gi|25029029|ref|NP_739083.1| hypothetical protein CE2473 [Corynebacterium efficiens YS-314]
gi|259505980|ref|ZP_05748882.1| aminomethyltransferase, gcvt-like protein [Corynebacterium
efficiens YS-314]
gi|23494316|dbj|BAC19283.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166461|gb|EEW51015.1| aminomethyltransferase, gcvt-like protein [Corynebacterium
efficiens YS-314]
Length = 421
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 58/293 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ I+V G A FL I++ V + L QG+I +++ + + F
Sbjct: 122 SNRKVIRVDGPDAPAFLNNILSQKVDAAEDGFTARALDLDAQGRIQHTMMVT-VADGVFY 180
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L+ ++ DSLI L S V +E E + + I + +V
Sbjct: 181 LDTSATEFDSLIAYLRKMIFWSEVTVE-------------EADLAIITLIGREIPLPEVT 227
Query: 127 LHRT--WGHNEKIA----------------------SDIKTYHELRINHGIVDPNTDFLP 162
RT W +++ + + Y R+ ++P T L
Sbjct: 228 FRRTVDWNGPKRVDVAVPRASFESGVDKLLDAGAELTGLMAYWAERVK--ALEPETPDLD 285
Query: 163 STIFPHD-----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPP- 215
+ PH+ + L + LTKGCY GQE V+R+ N+ R R M++ D P
Sbjct: 286 AKTIPHEIPHWIGRDEHLGAVHLTKGCYRGQETVARVD--NLGRSPRVMVLLHLDGSAPV 343
Query: 216 ---SGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG-MALTV 259
+G+ I + +G LG V+ G AL + + +D + G +A+TV
Sbjct: 344 APVTGAEITSGTRTVGRLGTVIHDCDLGPIALGLVKRSALDADLTIGDVAVTV 396
>gi|92113953|ref|YP_573881.1| glycine cleavage T protein (aminomethyl transferase)
[Chromohalobacter salexigens DSM 3043]
gi|91797043|gb|ABE59182.1| glycine cleavage T protein (aminomethyl transferase)
[Chromohalobacter salexigens DSM 3043]
Length = 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 41/245 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S +++ G A FLQ +A V A +A +P+G++L + ++EE + L +
Sbjct: 46 SIMEIAGADAERFLQGQTSAQVTLANGDFAPLTAFCSPKGRMLANGQLMRLEEGRYWLLL 105
Query: 70 DRSKRDSLIDKLL----FYKLR-SNVIIEIQPINGVVLSWNQEHTFSNS---SFIDERFS 121
D + L ++L FYK+ S + + G + E F+ + ++ +R
Sbjct: 106 DSELIEPLHEQLAKYAAFYKVEISQPAVRTFGVMGRDAADRLESHFTTAPPETWGMQRVG 165
Query: 122 IADVLLH-----------------RTWGH----NEKIASDIKTYHELRINHGIVDPNT-- 158
A +L H W + + + H+++ +
Sbjct: 166 QAVLLRHPGPVARYMVIAPEATALEAWQSLQPTTTAVGNAVWRLHDIQAGLAWLGAAQRD 225
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---TDDLPP 215
+LP + + L GIS KGCY GQEVV+R R ++KR + G + LP
Sbjct: 226 SYLPQMLN-----WEALAGISFRKGCYTGQEVVARAHFRGQVKKR--LQRGRLASHVLPA 278
Query: 216 SGSPI 220
G+P+
Sbjct: 279 PGTPV 283
>gi|255075321|ref|XP_002501335.1| predicted protein [Micromonas sp. RCC299]
gi|226516599|gb|ACO62593.1| predicted protein [Micromonas sp. RCC299]
Length = 370
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
Y + R G+ + + + + P + + LN IS KGCYIGQE+ +R H ++RK
Sbjct: 179 AYAQWRYTLGVAEGSEEL--GGLLPLECNLAGLNAISFDKGCYIGQELTARTHHTGVVRK 236
Query: 203 R 203
R
Sbjct: 237 R 237
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKILLYFLISKI 60
V L+++ +++ G+ AIPFLQ I+T DV +L A +A+ QG++ + +
Sbjct: 5 GVSLASRRVLRIAGEEAIPFLQRILTNDVRSLADAGAAPVYAALQNAQGRVRHDLFLHRE 64
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+ ++ +D L+ KLRS V ++
Sbjct: 65 FGGALLADLPADGFKDALDALVKLKLRSPVTLD 97
>gi|68471940|ref|XP_720013.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
gi|74591236|sp|Q5AEF0|CAF17_CANAL RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|46441863|gb|EAL01157.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331
>gi|262196877|ref|YP_003268086.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
gi|262080224|gb|ACY16193.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
Length = 267
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G FLQ + +AD+ L + IL+ +G+++ ++ ED +
Sbjct: 6 SEWGHIRVTGSDRARFLQGMCSADIEALAPGDWTRAVILSVKGRVVSIIEVA-CREDDLL 64
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ D + L + + V E QP++ + W+ + S+ D A
Sbjct: 65 ITCQADIADKTLSVLDKHAIMDEVAFEHVAQPMHRI---WD-----TPSAVWDAPPIFAP 116
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISL 180
+I RI G+ VD + D+ FP ++L+D ++
Sbjct: 117 PPGPAASAEQLEI---------RRIEAGMPRYGVDVSEDY-----FPFESLLD--RHVNH 160
Query: 181 TKGCYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230
KGCY+GQE VSR+ HR +K R + I G + +P + + + + GT+
Sbjct: 161 KKGCYLGQEPVSRVHHRGGAQKRLRGLRIEGDEPVPAGAAIVHAERAKAGTV 212
>gi|108758208|ref|YP_634466.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
gi|108462088|gb|ABF87273.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPM 205
LR+ G+ D + +TI P +A +L N IS KGCYIGQEV++R R ++ RK
Sbjct: 229 LRVEAGVPRYGQDMVDTTI-PLEA--NLANAISYNKGCYIGQEVIARATFRGHMNRKLTG 285
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234
++ G D+ P G+ + + ++G L VV
Sbjct: 286 LLLGDADVAP-GTELRRGEKKVGWLTSVV 313
>gi|68471677|ref|XP_720145.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
gi|46442000|gb|EAL01293.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331
>gi|238880768|gb|EEQ44406.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKR 331
>gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC]
gi|330825752|ref|YP_004389055.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
gi|317116888|gb|ADU99376.1| folate-binding protein YgfZ [Alicycliphilus denitrificans BC]
gi|329311124|gb|AEB85539.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
Length = 313
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 31/223 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+V G+ A FL +T D L + AR +A LT +G++L F+ K +
Sbjct: 19 LSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIAFKRNDAEV 78
Query: 66 ILEIDRS------KRDSLI------------DKLLFYKLRSNVIIEIQPINGVVLSWNQE 107
+L R KR S+ D Y L + + P G W +
Sbjct: 79 LLVCARELLAPTLKRLSMFVLRAKARLSDATDDFALYGLLGDAARAVLPEGGE--PWAK- 135
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDF 160
+S + + AD W S D + + GI T
Sbjct: 136 IDLGEASVV--QLYPADGQPRALWLAPATAGSAPAGAPLDESLWLWSEVRSGIAT-LTAP 192
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ P + + G++ KGCY GQEVV+R Q R +++R
Sbjct: 193 VAEAFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRR 235
>gi|119713593|gb|ABL97644.1| hypothetical protein MBMO_EB0-39H12.0020 [uncultured marine
bacterium EB0_39H12]
Length = 274
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEEDT 64
L + S +++ G+ + LQ IT+DV A AI +G+++ F +I +
Sbjct: 9 LEHLSILELNGEGSFQLLQGQITSDVNKATINNAEIGAICDIKGRVVSSFTVIKNTASEG 68
Query: 65 FILEIDRS---KRDSLIDK--------------LLFYKLRSNVIIEIQPINGVVLSWNQE 107
++L D+S K + ++ K FY + ++E P + S+
Sbjct: 69 YLLIGDKSVLQKTEEILMKYQPFYDVEIKVNEDFKFYGIHEEYLVEYYPQTDLEKSYQLY 128
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD--PNTDFLPST- 164
+F F+ +++ I L+ + E + D HE++I +D N +F S+
Sbjct: 129 DSFWRIHFLKKKYHI---LITK-----EDLFED---NHEVQIEEWFIDDIQNKNFEISSK 177
Query: 165 ----IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
PH+ L + + KGCY GQE+V+R+ +R +K P + L S S
Sbjct: 178 SIGMFTPHELGYHLSSRVDFEKGCYTGQEIVARMHYR--AKKLPSL------LVKSSSTF 229
Query: 221 LTD 223
L D
Sbjct: 230 LED 232
>gi|255726752|ref|XP_002548302.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404]
gi|240134226|gb|EER33781.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404]
Length = 468
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R +G+ + +++ P + +D +NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 272 RFENGVFETQDAPKGTSLLPFECNLDYVNGLSLDKGCYVGQELTIRSFNNGVIRKR 327
>gi|313668398|ref|YP_004048682.1| hypothetical protein NLA_10930 [Neisseria lactamica ST-640]
gi|313005860|emb|CBN87316.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06]
Length = 288
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 14 VSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQDL 72
Query: 74 RDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IADV 125
++ + +L + LR+ V+ EI G L+ + E + +F E S + V
Sbjct: 73 LEATVKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAFTAECVSDGICSVV 132
Query: 126 LLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
L HR H + A HE+R + + T A+ +LN
Sbjct: 133 LPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQMLN 184
Query: 177 -----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 185 QHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSE-AEAGTLLTADGEEAG 240
>gi|254785325|ref|YP_003072754.1| folate-binding protein [Teredinibacter turnerae T7901]
gi|237684991|gb|ACR12255.1| folate-binding protein [Teredinibacter turnerae T7901]
Length = 323
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 46/262 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEE 62
++LS+ I + G FLQ T D ++ RG A +G++ F+ +KI +
Sbjct: 26 IHLSDYRLIVITGPDGEKFLQGQTTCDFRRFEKHQWLRG-AHCNAKGRMHSTFVAAKIGD 84
Query: 63 DTFILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQE----------HTF 110
L + S +S + L Y + ++ + + GV+ + H
Sbjct: 85 QQIGLRVHASIAESALKALQKYIVFSKAEARVHTALLVGVLGDAAETTLPFSLPDVGHCD 144
Query: 111 SNSSFIDERFSIADV---LLHRT-----------WGHNEKIASDIKTYHELRINHGIVDP 156
+++ F R A LL+ T W H E + + ++ GI D
Sbjct: 145 TSAGFPVLRLEAAAAELWLLNDTHAGIPDQLPGVWAHPE-------CWQQYLLDKGIADV 197
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + + P + L++ +S KGCY GQE+V+R+ +R ++K + + TD
Sbjct: 198 TAESV-EELLPQELNYQLVDAVSFDKGCYTGQEIVARMHYRGKLKKH-LYLAETD----- 250
Query: 217 GSPILTDDIEIGTLGVVVGKKA 238
L+ D +G VVG+K
Sbjct: 251 ----LSADSTLGFGMDVVGEKG 268
>gi|167627906|ref|YP_001678406.1| hypothetical protein Fphi_1680 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597907|gb|ABZ87905.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 248
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 36/227 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62
+N ++V G I FLQ ++T+D+ L + ++T +G+I+ + +
Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLS---DDNNLLMTTFANLKGRIISLCFVKYVSS 62
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120
+L ++++ D+L+ L Y + S V + N++++ F+++ F++
Sbjct: 63 QKLLLSVEQTVIDNLLSWLKKYGMFSKVSFAV----------NEDYSLFFTDNGFLNHDI 112
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGIS 179
+ D L ++ E+I I ++L I I N + FLP+ + L ++ +S
Sbjct: 113 LVKDAL--KSEIAYEQIQK-INILNKLVI---IDQANVEKFLPAEL----DLDNIEKVVS 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----DLPPS-GSPI 220
TKGCY+GQEV++R+ ++ ++K ++ DL S G P+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLKTSDGKPL 209
>gi|32491186|ref|NP_871440.1| hypothetical protein WGLp437 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166393|dbj|BAC24583.1| ygfZ [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 309
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
L+ T+ + +K +I +++ + +++P T FP + ++ + I KGCY+
Sbjct: 160 LNNTFYNYKKYLFEI-----IKLKYPVIEPITS---EHFFPQEINLNYFHAIDFNKGCYM 211
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
GQE++ ++Q+ I +K I+ G P I+ +
Sbjct: 212 GQELIYKMQYLKIKKKFLYILYGKSSFLPKAGDIIEQKM 250
>gi|213619118|ref|ZP_03372944.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 3 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 61
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 62 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 119
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 120 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 177
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 178 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 235
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 236 AG----KASRVPEAGEDLEL 251
>gi|329910243|ref|ZP_08275261.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
gi|327546229|gb|EGF31267.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
Length = 334
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I G A FL +T DV L AR + TP+G++L FL+ + D+
Sbjct: 29 LTDLGLIAFEGDDAANFLHNQLTNDVEHLGIDQARLAGYCTPKGRLLASFLMWRTV-DSI 87
Query: 66 ILEIDRSKRDSLIDKLLFYKLR----------SNVIIEIQPINGVVL--SW------NQE 107
+LE+ R + ++ +L + +R S+ II + SW
Sbjct: 88 VLEVARDIQPAIQKRLQMFVMRAKAKSSDLTDSSAIIGLGGDAAGAALASWFPLLPDAPY 147
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------R 148
N++ R + A ++ W +IA I + +L
Sbjct: 148 AKVENAAGTVIRLADAGTMVRYQWITTPEIA--IAAWPQLGTTLRQAGTEHWRLTEILAA 205
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
I H + F+P + ++ + G++ KGCY GQE+V+R Q+ +++R
Sbjct: 206 IPHITLATQEKFVPQMVN-----LEAIGGVNFRKGCYPGQEIVARSQYLGKLKRR 255
>gi|170733254|ref|YP_001765201.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
gi|169816496|gb|ACA91079.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
Length = 310
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 62
Query: 65 -----------------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92
F+L ++K D L +F L V +
Sbjct: 63 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDASDTLAVAGFAGNVRDALSGIFDALPDGVHV 121
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGALPVVSPAVWDWLDVRAGEP 180
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 236 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|319943553|ref|ZP_08017835.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599]
gi|319743368|gb|EFV95773.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599]
Length = 434
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--------PMIITGTDDLPP 215
T P ++L+ G++ KGCY GQEVV+R ++R +++R P+ GTD L
Sbjct: 285 TFVPQMVNLELVGGVNFKKGCYPGQEVVARSEYRGKVKRRMFAGMCSGPLPEPGTDVLAW 344
Query: 216 SGSPI 220
G+PI
Sbjct: 345 DGTPI 349
>gi|331230924|ref|XP_003328126.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307116|gb|EFP83707.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 403
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP------YKIARGSAILTPQGKI----LLYF 55
L ++ I + G+ + FLQ +IT ++ L + A +A LTP G++ +Y
Sbjct: 37 LVDRGLISLKGEKSKTFLQGLITNNLNRLSSQEEAHHNTAFYTAFLTPPGRLQFDGFVYP 96
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHT 109
+ E +++ + D L+ L + L S V I + + W N +
Sbjct: 97 EPPENEAQCLLIDHHLPEADRLLAWLRRFVLNSRVKIS-KDSRELWAVWPNHPLDNIQSL 155
Query: 110 FSNSSFIDERFSIA-------DVLLHRTWGHNEKIA----------SDIKTYHELRINHG 152
NSS +++ + A L +R G+ E + + + Y + H
Sbjct: 156 LPNSSLLEQPSNHAWKDHRGDQRLGYRIIGNPESVPELEPLAQLPEAPLSAYALHVLLHA 215
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ P+ P +A +D +G+ KGCY+GQE+ +R H +IRKR
Sbjct: 216 SLPPSLSPPYPVTLPFEANLDYHHGVDFRKGCYVGQELTARTYHTGVIRKR 266
>gi|262281154|ref|ZP_06058936.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257385|gb|EEY76121.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 240
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T D L R +AI +G+I + KI ++F + + + + +
Sbjct: 13 GVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKINAESFEIVVVQDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
+ + FS + ++ + + H+T
Sbjct: 73 EFAKHIKKFG-----------------------AFSKMTLSEQGPAFPKISGHQT--EFS 107
Query: 136 KIASDIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+ +DI + + I G +F P + H G++ KGCY+GQE+V
Sbjct: 108 ALETDISEWQKQAIMTGQAWITQATEHEFQPQELRLHQR-----EGVNYDKGCYLGQEIV 162
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI--------GTLGVVVGKKA 238
+R+ + + ++ GT + P + + L +DIE+ G L +VV K A
Sbjct: 163 ARLWFKAKPKHWLHLVQGTGEAPAAKAQ-LHNDIEVVNSVANEEGYLALVVAKPA 216
>gi|227112625|ref|ZP_03826281.1| putative global regulator [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 333
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 44/257 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L + + + + G + +LQ +TADV LP A +GK+ + E
Sbjct: 28 ISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHILCAHCDAKGKMWSNLRLFHHGEG 87
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSW--NQE 107
+E R+ RD+ +++L Y + S I I+ + V S + E
Sbjct: 88 FAFIE-RRNLRDAQLNELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPDAE 146
Query: 108 H--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152
H T + + ERF + LL + +K++ +D + + L I G
Sbjct: 147 HPVVQHEGATLLHFAHPAERFLLVLSPEHGASLLEQL---GDKVSLNDSRQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-T 210
P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 204 --QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261
Query: 211 DDLPPSGSPILTDDIEI 227
+ +P +G DD+E+
Sbjct: 262 NKVPQAG-----DDLEL 273
>gi|262166511|ref|ZP_06034248.1| glycine cleavage T-protein [Vibrio mimicus VM223]
gi|262026227|gb|EEY44895.1| glycine cleavage T-protein [Vibrio mimicus VM223]
Length = 290
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S
Sbjct: 171 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINTPLS 220
>gi|88608631|ref|YP_506208.1| aminomethyl transferase family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600800|gb|ABD46268.1| aminomethyl transferase family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 310
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ Y +RI I + + P+T FP + MD KGCY+GQEV+SR + R+ I
Sbjct: 189 EEYQRIRIMSKISEAGKELKPNT-FPLEYAMDY--AFDFNKGCYVGQEVISRFRIRDFIE 245
Query: 202 KRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAI 241
+ + + G I D +G L LA+
Sbjct: 246 RALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAV 286
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILE 68
+F + G+ FLQ IIT +V TL A G ILTP+G+ + + + +T +LE
Sbjct: 9 NFYSIGGERVKAFLQGIITCNVETLE-DCAYG-LILTPKGRFICDLFVYRCSTETELLLE 66
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE 93
+R ++L+ L Y + +++I+
Sbjct: 67 TNRCNTEALLRVLDLYNFKRSIVIQ 91
>gi|258622355|ref|ZP_05717380.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585371|gb|EEW10095.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 366
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S
Sbjct: 247 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 296
>gi|268684583|ref|ZP_06151445.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268624867|gb|EEZ57267.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 288
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|332977316|gb|EGK14104.1| glycine cleavage T protein [Psychrobacter sp. 1501(2011)]
Length = 250
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 6 LSNQSF--IKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIE 61
+SN +F I + G+ A FLQ+ +T ++ + L Y A AI +G+I + K
Sbjct: 4 VSNLTFKQITLQGEDAGKFLQSQLTVNINKIDLSYIPA---AIANLKGRIEFGIWVKKQA 60
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
ED F + I SL L F K ++ I+I P + QE TFS++ +D
Sbjct: 61 EDQFDIVISADCLPSLQAHLKKFGAFSKFTTSEPIDIYPCVLGADTDEQEATFSHN--VD 118
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDL 174
+ D++ + L I N+ IV+ + P + +
Sbjct: 119 K--------------------CDVEEWKALSIATGNYWIVEATQELFQ----PQELRLHQ 154
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV- 233
G+ KGCY+GQEV++RI + + + G ++P G+ D ++I
Sbjct: 155 RGGVDYDKGCYLGQEVIARIYFKASPKAFLHRVKGEGEVPQPGASF--DKVQIVNAIATQ 212
Query: 234 --VGKKALAIARIDKVDHA 250
+G +AL +AR + ++++
Sbjct: 213 DKLGFEALVVARPEHLENS 231
>gi|240013871|ref|ZP_04720784.1| hypothetical protein NgonD_04353 [Neisseria gonorrhoeae DGI18]
gi|240121441|ref|ZP_04734403.1| hypothetical protein NgonPI_06688 [Neisseria gonorrhoeae PID24-1]
Length = 287
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 71 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
>gi|325920389|ref|ZP_08182320.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865]
gi|325549136|gb|EGD20059.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865]
Length = 273
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 17/245 (6%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++++ G A+ F A DV L + + LT +G+++ F + + E+DT +L +
Sbjct: 2 QYVRLIGMDAVAFAHAQFANDVQALAVGQWQWNTWLTAKGRVIAIFALLR-EDDTHVLML 60
Query: 70 ----DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + + +F + V + G + + ++ +
Sbjct: 61 LPDGNAAEIALQLGRFVFRRKLKIVGAALSAYGGFEPAQRAQGAQADIGTQRIELDMGTA 120
Query: 126 LLHRTW--GHNEKIASDIKT------YHELRINHGIVD-PNTDFLPSTIFPHDALMDLLN 176
L RT ++ +A+ I+ + + G+V P+ T P +D L+
Sbjct: 121 ALPRTLLLHTDQALAAPIEVPGVDAQWRRADLQLGLVRLPDAQREQWT--PQQLALDRLH 178
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
S+ KGCY GQE+V+R H KR + + D +G + D IGTL V G
Sbjct: 179 AFSVKKGCYPGQEIVART-HFLGKAKRALQLLEVDGAIEAGDAVTLDGTAIGTLVSVAGT 237
Query: 237 KALAI 241
ALA+
Sbjct: 238 LALAV 242
>gi|308389376|gb|ADO31696.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710]
Length = 304
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86
Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124
++ I +L + LR+ V+ EI ++ + + + S + ++D
Sbjct: 87 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 146
Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T A+ +
Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 256
>gi|325142449|gb|EGC64853.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
961-5945]
gi|325198415|gb|ADY93871.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136]
Length = 287
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 22/234 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124
++ I +L + LR+ V+ EI ++ + + + S + ++D
Sbjct: 70 DLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAECVSDGICT 129
Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T T +
Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239
>gi|325526814|gb|EGD04311.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. TJI49]
Length = 266
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 44/270 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59
L+ I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHGVR 62
Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92
+ +D F+L ++K D L +F L V +
Sbjct: 63 LLVSKDVQAAVQKRLSMFVLRA-KAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVHV 121
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ ++ R + D + G ++ + + ++R
Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWVGPRDEV-DARMAALAGKLPVVSPAVWDWLDVRAGEP 180
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
G D +G + D G++V A
Sbjct: 236 GDTDTVHAGVELFHSDDPGQPCGMIVNAAA 265
>gi|16761829|ref|NP_457446.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29143316|ref|NP_806658.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|168236108|ref|ZP_02661166.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737927|ref|YP_002115997.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|213425828|ref|ZP_03358578.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213582635|ref|ZP_03364461.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213646969|ref|ZP_03377022.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823826|ref|ZP_06543438.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|81513026|sp|Q8Z3X4|YGFZ_SALTI RecName: Full=tRNA-modifying protein ygfZ
gi|226730809|sp|B4TUR5|YGFZ_SALSV RecName: Full=tRNA-modifying protein ygfZ
gi|25512796|pir||AF0872 conserved hypothetical protein STY3204 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504131|emb|CAD02878.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138950|gb|AAO70518.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194713429|gb|ACF92650.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197290686|gb|EDY30040.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 326
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 252 AGK----ASRVPEAGEDLEL 267
>gi|262170581|ref|ZP_06038259.1| glycine cleavage T-protein [Vibrio mimicus MB-451]
gi|261891657|gb|EEY37643.1| glycine cleavage T-protein [Vibrio mimicus MB-451]
Length = 323
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S
Sbjct: 204 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 253
>gi|146312956|ref|YP_001178030.1| putative global regulator [Enterobacter sp. 638]
gi|166979585|sp|A4WE49|YGFZ_ENT38 RecName: Full=tRNA-modifying protein ygfZ
gi|145319832|gb|ABP61979.1| conserved hypothetical protein [Enterobacter sp. 638]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV L A P+GK+ + +
Sbjct: 19 LTLISLDDWALATISGADSEKYLQGQVTADVAQLGEHQHLLVAHCDPKGKMWSNLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------GVVLSWNQEHTFSN-- 112
+D F RS RD+ + +L Y + S V I N G ++ FS
Sbjct: 78 RQDGFACIERRSLRDAQLTELKKYAVFSKVTIVADDENVLLGVAGFQARAALKNLFSELP 137
Query: 113 -----------SSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+S + DERF + AD + G E ++ + + L I
Sbjct: 138 DADKPLINDGVTSLLWFEHPDERFLLVTDVATADRVTEALRG--EAQFNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ P D + S F P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGL--PIIDAVNSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAG 253
Query: 210 TDDLPPSGSPILTDDIEI 227
S P +D+E+
Sbjct: 254 N----ASRVPEAGEDLEL 267
>gi|50307117|ref|XP_453537.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636807|sp|Q6CRA2|CAF17_KLULA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49642671|emb|CAH00633.1| KLLA0D10681p [Kluyveromyces lactis]
Length = 462
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 122 IADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
I D+ +G N EK + R G+ D N +++P T+ +A D + I
Sbjct: 254 INDIFNCTAFGENPFEKANISATEIQKERFKFGLFDGNHEYIPETLLALEANFDYFEDSI 313
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ KGCY+GQE+ +R +++KR + IT
Sbjct: 314 NSDKGCYVGQELTARTFATGVLKKRCVGIT 343
>gi|194098941|ref|YP_002002006.1| hypothetical protein NGK_1381 [Neisseria gonorrhoeae NCCP11945]
gi|193934231|gb|ACF30055.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|302831836|ref|XP_002947483.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f.
nagariensis]
gi|300267347|gb|EFJ51531.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f.
nagariensis]
Length = 504
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ P D MD L+G+S TKGCY+GQE S +R ++R+R M +
Sbjct: 268 VAPLDFNMDQLSGVSYTKGCYVGQERNSFTHYRGVVRRRLMPV 310
>gi|294340169|emb|CAZ88541.1| putative Glycine cleavage T protein (aminomethyl transferase)
[Thiomonas sp. 3As]
Length = 317
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+L+ G++ KGCY GQEVV+R Q+R +++R +++G + P
Sbjct: 208 ELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVSGPAAMQPG 251
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++
Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+ L +D S + + +L + LR ++
Sbjct: 65 EQIGLLLDVSIAAAALQRLRMFVLRLKCTLD 95
>gi|258626739|ref|ZP_05721561.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580995|gb|EEW05922.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 323
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S
Sbjct: 204 PQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLS 253
>gi|309379187|emb|CBX22144.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 14 VSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQDL 72
Query: 74 RDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IADV 125
++ I +L + LR+ V+ EI G L+ + E + +F E S + V
Sbjct: 73 LEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPSLAFTAECVSDGICSVV 132
Query: 126 LLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
L HR H + A HE+R + + T T ++
Sbjct: 133 LPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK---ETAVAQMLNQHIIG 189
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 190 GVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSTV-EAGTLLAADGEEAG 240
>gi|240125991|ref|ZP_04738877.1| hypothetical protein NgonSK_07202 [Neisseria gonorrhoeae SK-92-679]
Length = 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
>gi|239999221|ref|ZP_04719145.1| hypothetical protein Ngon3_07040 [Neisseria gonorrhoeae 35/02]
gi|240080433|ref|ZP_04724976.1| hypothetical protein NgonF_03852 [Neisseria gonorrhoeae FA19]
gi|240115956|ref|ZP_04730018.1| hypothetical protein NgonPID1_06874 [Neisseria gonorrhoeae PID18]
gi|240118253|ref|ZP_04732315.1| hypothetical protein NgonPID_07296 [Neisseria gonorrhoeae PID1]
gi|240123801|ref|ZP_04736757.1| hypothetical protein NgonP_07659 [Neisseria gonorrhoeae PID332]
Length = 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
>gi|161870132|ref|YP_001599302.1| hypothetical protein NMCC_1171 [Neisseria meningitidis 053442]
gi|161595685|gb|ABX73345.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 304
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86
Query: 72 SKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIAD---- 124
++ + +L + LR+ + EI ++ + + + S + ++D
Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVDAELAASAEPLAAQEPSLVFTAECVSDGICT 146
Query: 125 -VLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A HE+R + + T A+ +
Sbjct: 147 VVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 198
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + GS + D E G
Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEVGSVLAADGEEAG 256
>gi|240016314|ref|ZP_04722854.1| hypothetical protein NgonFA_03954 [Neisseria gonorrhoeae FA6140]
gi|254493985|ref|ZP_05107156.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|260440231|ref|ZP_05794047.1| hypothetical protein NgonDG_03921 [Neisseria gonorrhoeae DGI2]
gi|268595045|ref|ZP_06129212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268596575|ref|ZP_06130742.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268601621|ref|ZP_06135788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268603962|ref|ZP_06138129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682425|ref|ZP_06149287.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291043527|ref|ZP_06569243.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|226513025|gb|EEH62370.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268548434|gb|EEZ43852.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268550363|gb|EEZ45382.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268585752|gb|EEZ50428.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588093|gb|EEZ52769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268622709|gb|EEZ55109.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291011990|gb|EFE03979.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|317164506|gb|ADV08047.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|56414994|ref|YP_152069.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161615996|ref|YP_001589961.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550067|ref|ZP_02343824.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168231154|ref|ZP_02656212.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168242836|ref|ZP_02667768.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194445927|ref|YP_002042300.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194449722|ref|YP_002047033.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194469818|ref|ZP_03075802.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194470174|ref|ZP_03076158.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197249201|ref|YP_002147961.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197363923|ref|YP_002143560.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|200386928|ref|ZP_03213540.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205353972|ref|YP_002227773.1| global regulator [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858311|ref|YP_002244962.1| global regulator [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|81360906|sp|Q5PJF4|YGFZ_SALPA RecName: Full=tRNA-modifying protein ygfZ
gi|189041185|sp|A9N3M5|YGFZ_SALPB RecName: Full=tRNA-modifying protein ygfZ
gi|226730802|sp|B5F5H2|YGFZ_SALA4 RecName: Full=tRNA-modifying protein ygfZ
gi|226730804|sp|B5QXH5|YGFZ_SALEP RecName: Full=tRNA-modifying protein ygfZ
gi|226730805|sp|B5RE09|YGFZ_SALG2 RecName: Full=tRNA-modifying protein ygfZ
gi|226730806|sp|B4TGW8|YGFZ_SALHS RecName: Full=tRNA-modifying protein ygfZ
gi|226730807|sp|B4T543|YGFZ_SALNS RecName: Full=tRNA-modifying protein ygfZ
gi|226730808|sp|B5BFL3|YGFZ_SALPK RecName: Full=tRNA-modifying protein ygfZ
gi|56129251|gb|AAV78757.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161365360|gb|ABX69128.1| hypothetical protein SPAB_03796 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404590|gb|ACF64812.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408026|gb|ACF68245.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456182|gb|EDX45021.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194456538|gb|EDX45377.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197095400|emb|CAR60959.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212904|gb|ACH50301.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|199604026|gb|EDZ02571.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205273753|emb|CAR38748.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324690|gb|EDZ12529.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205334562|gb|EDZ21326.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337989|gb|EDZ24753.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|206710114|emb|CAR34469.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326629086|gb|EGE35429.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 252 AGK----ASRVPEAGEDLEL 267
>gi|168463783|ref|ZP_02697700.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195633631|gb|EDX52045.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 252 AGK----ASRVPEAGEDLEL 267
>gi|240113196|ref|ZP_04727686.1| hypothetical protein NgonM_06426 [Neisseria gonorrhoeae MS11]
Length = 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 71 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
>gi|238909848|ref|ZP_04653685.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 EHDGFAWIERRSVREAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSE 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 252 AGK----ASRVPEAGEDLEL 267
>gi|268599276|ref|ZP_06133443.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583407|gb|EEZ48083.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|59800982|ref|YP_207694.1| hypothetical protein NGO0548 [Neisseria gonorrhoeae FA 1090]
gi|293398842|ref|ZP_06643007.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
gi|59717877|gb|AAW89282.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291610256|gb|EFF39366.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|149918180|ref|ZP_01906672.1| LigA [Plesiocystis pacifica SIR-1]
gi|149820940|gb|EDM80347.1| LigA [Plesiocystis pacifica SIR-1]
Length = 330
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 38/260 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLIS 58
+S++ +++ + V G+ A FLQ ++TADV L A + +LT +GK++ L+ L +
Sbjct: 13 LSALPRQDRAVVHVAGEDAARFLQGLLTADVSALTPGRAIPAGLLTVKGKLVSELWVLAT 72
Query: 59 ---KIEEDTFILEIDRSKRDSLIDKLLF-YKLRSNVIIEIQPINGVVL-----SWNQEHT 109
E++T + ++ + K L + + +V +E L S ++
Sbjct: 73 VDPDDEDETRLALALPAELAESVTKALDDHIIMDDVELETPEPGAAALLLRFGSLSEAKV 132
Query: 110 FSNSSFIDERFSIADVLLHRTW-GHNEKIA-------------SDIKTYHELRINHGIVD 155
+ + RF+ A L W G +A +D T+ R++
Sbjct: 133 EAPAGVA--RFTCAHPLAGELWLGSTSALAEAAAALAAAGSQVADAPTFTRARVDQARPA 190
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ P P + ++ +S KGCY+GQE +SRI +R + + + + + PP
Sbjct: 191 WGFELTPDRFPPE---IGFVDAVSYAKGCYLGQEPLSRIHNRGQVNRVMVRVMAME--PP 245
Query: 216 SGS----PI--LTDDIEIGT 229
S + PI L +D E+G
Sbjct: 246 SQAMADGPIALLAEDKEVGA 265
>gi|268686893|ref|ZP_06153755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627177|gb|EEZ59577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 13 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 71
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 72 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 131
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 132 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 189 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|168823060|ref|ZP_02835060.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205340631|gb|EDZ27395.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320087478|emb|CBY97243.1| tRNA-modifying protein ygfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVIA--PDDERVLLGVAGFQARAALANVFSV 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TGTDDLPPSGSPILTDDIEI 227
G S P +D+E+
Sbjct: 252 AGK----ASRVPEAGEDLEL 267
>gi|171463581|ref|YP_001797694.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193119|gb|ACB44080.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 335
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 40/233 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY----KIARG------SAILTPQGKILLYF 55
L+ I + G A FLQ +T VL L +A+G +P+G++L
Sbjct: 22 LAEWGLIIIEGPDAASFLQNQLTNSVLGLTLTQLGSVAQGFSSTRLVGYCSPKGRLLASA 81
Query: 56 ---LISKIEE--DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHT 109
L S ++ D + L I + S +L + LRS V +I++ V + +
Sbjct: 82 WIGLFSSVDSSHDRYALFISKDIAASTAKRLSMFVLRSKVKVIDLSDSWTVAGVYGPNNQ 141
Query: 110 FSNSSFIDERFSI--------ADVLLHRTWGHNEKIASD-------IKTYHELRINHGI- 153
++S+F D+ ++ +++L + + +D + ++EL + I
Sbjct: 142 ITSSNFNDQSMALRLPDVLVGSNLLARIVMAYPNQDQADTPESREILDAWNELEVLSAIP 201
Query: 154 ---VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I + + G+ KGCY GQE+V+R Q+R I++R
Sbjct: 202 RIVAATQEQFVPQMIN-----FESVTGVDFKKGCYPGQEIVARSQYRGSIKRR 249
>gi|226939930|ref|YP_002795003.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter
hongkongensis HLHK9]
gi|226714856|gb|ACO73994.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter
hongkongensis HLHK9]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 46/272 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
V LS+ + + G A FLQ ++ D+ + + A+ S+ T +G++L FL+
Sbjct: 27 VPLSDFAVLDFSGADAETFLQGQLSNDIRQVSPQAAQWSSYSTAKGRMLANFLVWQESGH 86
Query: 58 ----------SKIEE--DTFIL--EIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGV 100
+ I++ + FIL ++ +RD L+ L V+ + P G+
Sbjct: 87 YQLMLSAGLAAAIDKRLNMFILRSKVSHRQRDDLVLLGLTGPAAERVMQQSGLAVPATGL 146
Query: 101 VLSWNQEHTFSNSSFI---DERF--SIADVLLHRTW----GHNEKIASDIK-TYHELRIN 150
+ T S I + RF ++A W H K A T ++
Sbjct: 147 AV-----ETLSEGCVIRLPEGRFVLALAPAAAMSLWPQLCAHGAKPAPMTNWTLSDIATG 201
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ T P A ++L+ G+S KGCY GQE+V+R Q+ +++R M
Sbjct: 202 TPWITQATQ---EAFVPQMANLELIGGVSFQKGCYPGQEIVARTQYLGKVKRR-MFRALA 257
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
D G + + +E G +GK LA+A
Sbjct: 258 DAQAMPGDELFS--VETGE--QAIGKVMLAVA 285
>gi|119897884|ref|YP_933097.1| aminomethyltransferase [Azoarcus sp. BH72]
gi|119670297|emb|CAL94210.1| conserved hypothetical aminomethyltransferase [Azoarcus sp. BH72]
Length = 342
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPILTDDIEIGTLG 231
DL+ G++ KGCY GQE+V+R Q+ ++KR + D +P GS + D + G
Sbjct: 234 DLIGGVNFKKGCYPGQEIVARTQYLGTVKKRLYRVALDADSVPTPGSDLYAPDFGEQSAG 293
Query: 232 VVV--------GKKALAIARIDKVD 248
VV G +ALA+ + V+
Sbjct: 294 KVVNVAPSPEGGYEALAVLQNTSVE 318
>gi|240128504|ref|ZP_04741165.1| hypothetical protein NgonS_07711 [Neisseria gonorrhoeae SK-93-1035]
Length = 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 RVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQD 70
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS--IADV 125
++ + +L + LR+ + EI G L+ + E + +F E S I V
Sbjct: 71 LLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSECVSDGICSV 130
Query: 126 LLH-RTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+LH R H + A + HE+R + + T T ++
Sbjct: 131 ILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHII 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 188 GGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
>gi|322613447|gb|EFY10388.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621039|gb|EFY17897.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624103|gb|EFY20937.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628158|gb|EFY24947.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633277|gb|EFY30019.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636145|gb|EFY32853.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639483|gb|EFY36171.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647584|gb|EFY44073.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648768|gb|EFY45215.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653823|gb|EFY50149.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657929|gb|EFY54197.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664032|gb|EFY60231.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668957|gb|EFY65108.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673049|gb|EFY69156.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322677960|gb|EFY74023.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681136|gb|EFY77169.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687934|gb|EFY83901.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194870|gb|EFZ80057.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196621|gb|EFZ81769.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202679|gb|EFZ87719.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207834|gb|EFZ92780.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212614|gb|EFZ97431.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214903|gb|EFZ99651.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222634|gb|EGA06999.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225087|gb|EGA09339.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230609|gb|EGA14727.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235040|gb|EGA19126.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239079|gb|EGA23129.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244563|gb|EGA28569.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247178|gb|EGA31144.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253339|gb|EGA37168.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256354|gb|EGA40090.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262470|gb|EGA46026.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267434|gb|EGA50918.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269162|gb|EGA52617.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E D F RS R++ + +L Y + S V+I P + VL
Sbjct: 78 ERDGFAWIERRSVREAQLTELKKYAVFSKVVIA--PDDERVLLGVAGFQARAALANVFSE 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
S NQ S+ + ERF + A++L + H E ++ + + L
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALD 193
Query: 149 INHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++
Sbjct: 194 IEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLL 251
Query: 208 TG-TDDLPPSGSPI 220
G +P +G +
Sbjct: 252 AGKASRVPEAGEDL 265
>gi|262273721|ref|ZP_06051534.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886]
gi|262222136|gb|EEY73448.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886]
Length = 326
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSG 217
D + P + L+GIS KGCY GQE V+R ++R I ++ ++ G +D P +G
Sbjct: 201 DATTNEFIPQALNLQALDGISFKKGCYTGQETVARAKYRGINKRATYLLQGKAEDAPKAG 260
>gi|148243400|ref|YP_001228557.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT)
[Synechococcus sp. RCC307]
gi|147851710|emb|CAK29204.1| Predicted aminomethyltransferase related to glycine cleavage
T-protein (GcvT) [Synechococcus sp. RCC307]
Length = 279
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
A ++ +LRI+ GI P + L P + + L +SL KGCY+GQE ++++ R
Sbjct: 149 ALSLEQQEQLRIHQGIPAPGAE-LREEFNPFE--LGLRQRVSLEKGCYLGQETLAKLHSR 205
Query: 198 NIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ +++ R ++ D P G + T E G L
Sbjct: 206 DGLKQQLRRFVVADGADAPEPGQQLRTTSGERGAL 240
>gi|170703704|ref|ZP_02894430.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
gi|170131386|gb|EDS99987.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
Length = 310
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQ 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92
+L + + + ++ +L + LRS V +
Sbjct: 63 LL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVHV 121
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEP 180
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 235
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 236 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|172060853|ref|YP_001808505.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
gi|171993370|gb|ACB64289.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
Length = 344
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 44/273 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------IEED 63
I V G A FL + +T D+ L AR S + +G++L FL + + +D
Sbjct: 43 IDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQLLVSKD 102
Query: 64 T----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVIIEIQPIN 98
F+L ++K D L +F L V +++
Sbjct: 103 VQAAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVHVKVDGPA 161
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG-IVDPN 157
G ++ +I R + D L G ++ + + ++R I P
Sbjct: 162 GALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPSVSPAVWDWLDVRAGEPRITQPA 220
Query: 158 TD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLP 214
+ F+P + D++ ++ KGCY GQEVV+R Q+R I++R + + G D
Sbjct: 221 VEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETDTV 275
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+G + D G++V A +D +
Sbjct: 276 HAGIELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|29830571|ref|NP_825205.1| hypothetical protein SAV_4028 [Streptomyces avermitilis MA-4680]
gi|29607683|dbj|BAC71740.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 321
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 23/236 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LSN+ + V G+ + +L ++T V LP A + IL+ G I LY +
Sbjct: 42 VDLSNRGVVTVTGEDRLSWLHLLLTQHVSELPAHRATEALILSAHGHIEHALYLVDDGT- 100
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113
T ++ +++LI L FY++ R+ + G + + +
Sbjct: 101 --TTWAHVEPGTQEALIAYLESMKFFYRVEVADRTGEFAVVHLPAGSIADVPADVVVRET 158
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPHDALM 172
++ + F L ++ A+ + Y LR+ H P F PH+ L
Sbjct: 159 AYGRDLFLPRAEL--ESYADRSGPAAGLLAYEALRVEHH--RPRLGFETDHRTIPHE-LG 213
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224
+ + + L KGCY GQE V+R+Q+ +R + + G++ LPP G+ + L DD
Sbjct: 214 WIGSAVHLEKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPHGTELRLADD 269
>gi|50083936|ref|YP_045446.1| hypothetical protein ACIAD0714 [Acinetobacter sp. ADP1]
gi|49529912|emb|CAG67624.1| conserved hypothetical protein; putative Glycine cleavage T protein
(aminomethyl transferase) [Acinetobacter sp. ADP1]
Length = 240
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P + + +G+ KGCY+GQE+V+R+ + + ++ G ++P S + L +D+E
Sbjct: 138 PQELRLHQRDGVDYDKGCYLGQEIVARLWFKAKPKHWLHLVLGDGEVPVSATK-LNNDVE 196
Query: 227 -IGTLGVVVGKKALAIAR 243
+ ++ + G KAL IA+
Sbjct: 197 VVNSIAIASGYKALVIAK 214
>gi|148244472|ref|YP_001219166.1| hypothetical protein COSY_0317 [Candidatus Vesicomyosocius okutanii
HA]
gi|146326299|dbj|BAF61442.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 223
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 50/225 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+KV G A FLQ ++ D++++ + +A QGK++ F ++K + D F L +
Sbjct: 7 LKVSGVDAQSFLQGQLSNDIVSIGENEWQLNAYCQHQGKVIALFWVTKYKND-FYLNFPK 65
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
S +D + L + L S+V I V S+N + DV+ H
Sbjct: 66 SLQDKIFKHLHIFVLMSDVEI-------VQTSFN-------------TYPPIDVMKH--- 102
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN-GISLTKGCYIGQE 189
P + S F P + +D+ G++ +KGCY GQE
Sbjct: 103 ------------------------PEVYLITSEKFVPQELNLDINEVGVNFSKGCYPGQE 138
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+V+R+ + ++R + L I D + G+VV
Sbjct: 139 IVARLHYLGKPKRRMRLFECEQILKVGDKLIALDSKSVKASGIVV 183
>gi|295676545|ref|YP_003605069.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002]
gi|295436388|gb|ADG15558.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I G A FL A +T DV L AR + + +G++L FL S DT
Sbjct: 48 LSQFGVIDTTGDDAASFLHAQLTNDVQHLDAANARLAGYCSAKGRLLASFL-SWRSGDTI 106
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 107 RLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVVGLAGDVRGALSGVFDALPDGVHV 166
Query: 118 ----------------ERF--------SIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152
ER + + LL G ++++ + + ++R
Sbjct: 167 QVDGTAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRAGEPR 226
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
I P + F+P + D+L ++ KGCY GQEVV+R Q+R I++R
Sbjct: 227 ITQPVVEQFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRR 273
>gi|253687038|ref|YP_003016228.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259710252|sp|C6D8Y4|YGFZ_PECCP RecName: Full=tRNA-modifying protein ygfZ
gi|251753616|gb|ACT11692.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 333
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R
Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247
Query: 198 NIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227
++ + G + +P +G DD+E+
Sbjct: 248 GANKRALYWLAGKANQVPQAG-----DDLEL 273
>gi|88801262|ref|ZP_01116796.1| hypothetical protein MED297_00205 [Reinekea sp. MED297]
gi|88775999|gb|EAR07240.1| hypothetical protein MED297_00205 [Reinekea sp. MED297]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
P + +NGIS KGCY GQE V+R ++R I ++ I++G P L
Sbjct: 136 PQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQAGDAL 190
>gi|260771932|ref|ZP_05880850.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14]
gi|260613224|gb|EEX38425.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14]
Length = 323
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 31/228 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + I V G + P+LQ +T +V+ LP + A +GK+ F + D +
Sbjct: 26 LEQWAAIYVSGIDSKPYLQGQLTCNVVALPAQQMVYGAHCDAKGKVWSAFRLFH-HRDGY 84
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPI------NGVVLSWNQEHTFSNSSFIDE 118
+ S D + +L Y + S V IE Q + L NQ + + + E
Sbjct: 85 AMFQPASAVDVELRELKKYAIFSKVAIEQSQDVALGLLGKQAELRLNQFNDCRDDVRVLE 144
Query: 119 RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINHGIV--DPNTDFL 161
+ + + R W +++ S+I T E++ IV D + +
Sbjct: 145 QGTAVKISAQR-WLLLIKPDSVEALLESMPAQRVNSEIWTRFEIQEALPIVTQDQQNEHI 203
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + + L GIS KGCY GQE V+R ++R I ++ ++ G
Sbjct: 204 PQALN-----LQALGGISFNKGCYTGQETVARAKYRGINKRALCLVAG 246
>gi|161506404|ref|YP_001573516.1| putative global regulator [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189041184|sp|A9MRH6|YGFZ_SALAR RecName: Full=tRNA-modifying protein ygfZ
gi|160867751|gb|ABX24374.1| hypothetical protein SARI_04602 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 326
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALATITGVDSEKYIQGQVTADVSQMTEQQHLLTAHCDAKGKMWSNLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------ 102
E + F+ RS R++ + +L Y + S V+I P + VL
Sbjct: 78 EREGFVWIERRSVREAQLTELKKYAVFSKVVI--APDDDRVLLGVAGFQARAALANVFSD 135
Query: 103 ---SWNQEHTFSNSSFI-----DERF----SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
S NQ S+ + ERF +A V + H E ++ + + L I
Sbjct: 136 LPNSENQVVRDGASTLLWFEHPAERFLLVTDVATVNMLTEKLHGEAELNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAG 253
Query: 210 TDDLPPSGSPILTDDIEI 227
S P +D+E+
Sbjct: 254 K----ASRVPEAGEDLEL 267
>gi|94676520|ref|YP_588618.1| putative global regulator [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|118577990|sp|Q1LTU6|YGFZ_BAUCH RecName: Full=tRNA-modifying protein ygfZ
gi|94219670|gb|ABF13829.1| glycine cleavage T-protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 325
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P ++ L GIS KGCY+GQE ++R ++ N+ +K ++G + P+ S L
Sbjct: 211 LLPQALNIEALGGISFNKGCYLGQEAIARTKYHNMNKKELCFLSGKANRIPTASEKL 267
>gi|260771285|ref|ZP_05880212.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972]
gi|260613882|gb|EEX39074.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972]
Length = 323
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S
Sbjct: 204 PQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDS 255
>gi|254388558|ref|ZP_05003792.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702279|gb|EDY48091.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 327
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS++ + V G+ + +L ++T + LP A + IL+ G + LY + +
Sbjct: 42 VDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG-- 99
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113
DT ++ ++ LI L FY++ R++ I + G + + + +
Sbjct: 100 -DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTET 158
Query: 114 SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPH 168
+ E D+ L R ++ + + Y LR+ P F PH
Sbjct: 159 VVVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVE--AHRPRVGFETDHRTIPH 216
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224
+ L + + L KGCY GQE V+R+Q+ +R + + G++ LP +G+PI L D
Sbjct: 217 E-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAAD 275
Query: 225 IEIG-TLGVV--------VGKKALAIARID-KVDHAIKKG 254
E G LG V +G ALA+ + + VD A+ G
Sbjct: 276 GEEGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAG 315
>gi|126452702|ref|YP_001066586.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106a]
gi|167845302|ref|ZP_02470810.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei B7210]
gi|242315915|ref|ZP_04814931.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106b]
gi|126226344|gb|ABN89884.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1106a]
gi|242139154|gb|EES25556.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106b]
Length = 348
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R
Sbjct: 217 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 268
Query: 206 ---IITGTD 211
+ GTD
Sbjct: 269 LAHVAAGTD 277
>gi|224008166|ref|XP_002293042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971168|gb|EED89503.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 591
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
TY LR GI + ++ T + + LN IS TKGCY+GQE+ +R Q ++RK
Sbjct: 290 TYSVLRRLSGIAE-GSELTTRTAL--ECNQEFLNAISFTKGCYLGQELTARSQFVGVVRK 346
Query: 203 R--PMIITGTD 211
R P++I T+
Sbjct: 347 RIVPVMICETE 357
>gi|15676912|ref|NP_274058.1| hypothetical protein NMB1024 [Neisseria meningitidis MC58]
gi|7226264|gb|AAF41424.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|325140256|gb|EGC62781.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385]
gi|325144399|gb|EGC66701.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240013]
gi|325200291|gb|ADY95746.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
H44/76]
Length = 288
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123
++ + +L + LR+ + EI V QE + + ++ +
Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 130
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T A+ +
Sbjct: 131 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 240
>gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1]
gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1]
Length = 5299
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L ++ ++V G+ FLQ +++ D+ + A +A+LTPQGK L + ++ D
Sbjct: 7 VRLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVYTALLTPQGKFLYDLFVVEL-GD 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS 88
F+++ + ++ + L KL YKLRS
Sbjct: 66 VFLIDAEAARIEELRKKLSMYKLRS 90
>gi|251791001|ref|YP_003005722.1| folate-binding protein YgfZ [Dickeya zeae Ech1591]
gi|247539622|gb|ACT08243.1| folate-binding protein YgfZ [Dickeya zeae Ech1591]
Length = 326
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + L GIS TKGCY GQE+V+R ++R
Sbjct: 183 NDSRQWLALDIEAG--QPIIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYR 240
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + G P + P D++E+
Sbjct: 241 GANKRALYWLAG----PSTQMPAAGDELEL 266
>gi|297200637|ref|ZP_06918034.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
gi|197709768|gb|EDY53802.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
Length = 321
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 100/245 (40%), Gaps = 42/245 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYF------ 55
V LS++ + V G + +L ++T V LP A + IL+ G I LY
Sbjct: 42 VDLSHRGVVSVTGDDRLSWLHLLLTQHVSDLPTGQATEALILSAHGHIEHALYLVDDGTT 101
Query: 56 ------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103
LI+ +E F +D + R + L + I E+ GVV+
Sbjct: 102 VWAHVEPGTQDALIAYLESMKFFYRVDVADRTG---EFAVVHLPAGSIAEVP--EGVVV- 155
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LP 162
+E + F+ AD+ ++ A + Y LR+ H P F
Sbjct: 156 --RETPYGRDLFLPR----ADL---ESYAEKSGPAVGLLAYEALRVEHH--RPRLGFETD 204
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSP 219
PH+ L + + L KGCY GQE V+R+Q+ +R + + G++ LPP+G+
Sbjct: 205 HRTIPHE-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGAD 263
Query: 220 ILTDD 224
I D
Sbjct: 264 IRLAD 268
>gi|116071548|ref|ZP_01468816.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
gi|116065171|gb|EAU70929.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
Length = 265
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G+ FLQ +AD+ P + L+ G++ LL + D +L
Sbjct: 13 LLRLEGEGTRNFLQGQTSADMTDTPEGALVQTCWLSATGRLRALLEVRLRANGADVLVLA 72
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + D+++F R + +QPI Q S I + D L
Sbjct: 73 GDATAVAKGFDQVIFPADR----VRLQPIT------EQRRVQPLSKTITALWLDHDSPLP 122
Query: 129 RTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+W N + ++ + E R+ G + N D P + L DL +SL+KGC++G
Sbjct: 123 PSWTSNPADSKQLERWRIEQRLAFGAGELNADANPFEL----GLTDL---VSLSKGCFLG 175
Query: 188 QEVVSRIQH 196
QE V+++ +
Sbjct: 176 QETVAKLAN 184
>gi|294814029|ref|ZP_06772672.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
gi|326442433|ref|ZP_08217167.1| hypothetical protein SclaA2_15264 [Streptomyces clavuligerus ATCC
27064]
gi|294326628|gb|EFG08271.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
Length = 330
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS++ + V G+ + +L ++T + LP A + IL+ G + LY + +
Sbjct: 45 VDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG-- 102
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113
DT ++ ++ LI L FY++ R++ I + G + + + +
Sbjct: 103 -DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTET 161
Query: 114 SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPH 168
+ E D+ L R ++ + + Y LR+ P F PH
Sbjct: 162 VVVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVE--AHRPRVGFETDHRTIPH 219
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI-LTDD 224
+ L + + L KGCY GQE V+R+Q+ +R + + G++ LP +G+PI L D
Sbjct: 220 E-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAAD 278
Query: 225 IEIG-TLGVV--------VGKKALAIARID-KVDHAIKKG 254
E G LG V +G ALA+ + + VD A+ G
Sbjct: 279 GEEGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAG 318
>gi|89075098|ref|ZP_01161539.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34]
gi|89049185|gb|EAR54750.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34]
Length = 327
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
P + +NGIS KGCY GQE V+R ++R I ++ I++G P L
Sbjct: 209 PQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQAGDAL 263
>gi|315179108|gb|ADT86022.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 326
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S
Sbjct: 207 PQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDS 258
>gi|293394597|ref|ZP_06638891.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582]
gi|291422906|gb|EFE96141.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582]
Length = 329
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 139 SDIKTYHELRINHG--IVD-PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+D + + L I G I+D PN+ + + P + L GIS +KGCY GQE+V+R +
Sbjct: 185 NDSQQWLTLDIEAGYPIIDAPNS----AQLIPQATNLQALGGISFSKGCYTGQEMVARAK 240
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
R ++ + G P+ S DD+E+
Sbjct: 241 FRGANKRAMYWLAGKGSRVPAAS----DDLEL 268
>gi|290959378|ref|YP_003490560.1| hypothetical protein SCAB_49691 [Streptomyces scabiei 87.22]
gi|260648904|emb|CBG72018.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 321
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 43/246 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYF------ 55
V LS++ I V G+ + +L ++T V LP A + IL+ G I LY
Sbjct: 42 VDLSHRGVIAVSGEDRLSWLHLLLTQHVSELPVGEATEALILSANGHIEHALYLVDDGTT 101
Query: 56 ------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103
L++ +E F +D + R D + L + I +I P VV
Sbjct: 102 VWAHAEPGTREALLAYLESMKFFYRVDVADR---TDDVAVVHLPAGSITQI-PAGTVV-- 155
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-LP 162
+E + F+ AD+ ++ A + Y LR+ H P F
Sbjct: 156 --RETPYGRDLFLPR----ADL---ESFAEKAGPAVGLLAYEALRVEHH--RPRLGFETD 204
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSP 219
PH+ L + + L KGCY GQE V+R+Q+ +R + + G++ LPP G+
Sbjct: 205 HRTIPHE-LGWIGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPRGAE 263
Query: 220 I-LTDD 224
+ L DD
Sbjct: 264 LRLADD 269
>gi|162454476|ref|YP_001616843.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56']
gi|161165058|emb|CAN96363.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56']
Length = 332
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ LR+ + + DF FP +A ++ +S +KGCY+GQE V +Q R +K
Sbjct: 192 AWEVLRVENNVPRFGVDFDDQN-FPQEASIED-RAVSFSKGCYLGQETVFMLQARGHAKK 249
Query: 203 R--PMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256
R + + G +P L D +G + V G LA+ + K HA+ +G A
Sbjct: 250 RLVQLAVEGEGGVPAGAEIALPDGAAVGAVTSQVEDPRGTGLLALGYV-KYKHAV-QGTA 307
Query: 257 LTVHG 261
L V G
Sbjct: 308 LRVAG 312
>gi|289548965|ref|YP_003473953.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484]
gi|289182582|gb|ADC89826.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484]
Length = 301
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L ISL KGCY+GQE ++R+ +R R +++ + L G + D ++GT+
Sbjct: 204 LRYAISLNKGCYVGQEAIARVYYRGRT-PRTLVLLQAEGL-REGEKLFDGDKQVGTV-TS 260
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
VG + A+ + +V HA K+ + T G VK
Sbjct: 261 VGSEGYALGYVLRV-HAQKEKVLYTPEGTAVK 291
>gi|254507542|ref|ZP_05119676.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16]
gi|219549612|gb|EED26603.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16]
Length = 321
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI------ 57
+L++ I + G +LQ +T DV+TL + A +GK+ F +
Sbjct: 24 THLTSWGAISMIGDDKKSYLQGQVTCDVVTLEQTQSTFGAHCDAKGKVWSVFRLFHHNGG 83
Query: 58 --------------SKIEEDTFILEIDRSKRDSLI-----DKLLFY-KLRSNVIIEIQPI 97
+++++ ++D ++ D ++ ++ F+ SN +++PI
Sbjct: 84 YAMVQPKSAIDVELTELKKYAIFSKVDIAQSDDVLFGVMGEQATFWVDSLSNETGDVRPI 143
Query: 98 NG-VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+G + + I S+ +L + + +++ + TY+E+ V
Sbjct: 144 DGGTAVKVGPQRWL----LIVSEASVESLLANCS---AQRVEESLWTYYEIEAALPFV-- 194
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
++ + P + + GIS TKGCY GQE V+R ++R + ++ I+ GT
Sbjct: 195 -SNEQQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKRAMFIVKGT 247
>gi|83718935|ref|YP_442673.1| glycine cleavage T-protein superfamily protein [Burkholderia
thailandensis E264]
gi|257138886|ref|ZP_05587148.1| glycine cleavage T-protein superfamily protein [Burkholderia
thailandensis E264]
gi|83652760|gb|ABC36823.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis E264]
Length = 348
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 43/243 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
L + V G A FL +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 65 -----------------FILEIDRSKRDSLIDKL--------------LFYKLRSNVIIE 93
F+L D+ + +F L + +
Sbjct: 101 LLVSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFDALPDGIHTK 160
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ G ++ + +I R + D L ++++ + + ++R
Sbjct: 161 VDAPAGALVRLPDAAGRARYLWIAARAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 154 VD-PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IIT 208
V P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 220 VTLPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAV 274
Query: 209 GTD 211
GTD
Sbjct: 275 GTD 277
>gi|271499205|ref|YP_003332230.1| folate-binding protein YgfZ [Dickeya dadantii Ech586]
gi|270342760|gb|ACZ75525.1| folate-binding protein YgfZ [Dickeya dadantii Ech586]
Length = 326
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + L GIS TKGCY GQE+V+R ++R
Sbjct: 183 NDSRQWLALEIEAG--RPVIDSANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYR 240
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + G+ + +P + D++E+
Sbjct: 241 GANKRALYWLAGSG----AQTPAVGDELEL 266
>gi|209517029|ref|ZP_03265877.1| folate-binding protein YgfZ [Burkholderia sp. H160]
gi|209502560|gb|EEA02568.1| folate-binding protein YgfZ [Burkholderia sp. H160]
Length = 350
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 42/276 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I G A FL + +T D+ L AR + + +G++L FL S DT
Sbjct: 43 LSQFGVIDTTGDDAASFLHSQLTNDIQHLDAANARLAGYCSAKGRLLASFL-SWRSGDTI 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 102 RLLVSKDVQAAVQKRLSMFVLRAKAKLTDTSGELAVIGLAGDVRGALSGVFDALPDGVHV 161
Query: 118 ----------------ERF--------SIADVLLHRTWGHNEKIASDIKTYHELRINHG- 152
ER + + LL G ++++ + + ++R
Sbjct: 162 QVDGAAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRAGEPR 221
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209
I P + F+P + D+L ++ KGCY GQEVV+R Q+R I++R + + G
Sbjct: 222 ITQPVVEQFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 276
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
D G+ + D G++V + +D
Sbjct: 277 ELDTVRPGTEVFHSDDPGQPCGMIVSAASAQAGGVD 312
>gi|157372133|ref|YP_001480122.1| putative global regulator [Serratia proteamaculans 568]
gi|166979587|sp|A8GIQ4|YGFZ_SERP5 RecName: Full=tRNA-modifying protein ygfZ
gi|157323897|gb|ABV42994.1| glycine cleavage T protein (aminomethyl transferase) [Serratia
proteamaculans 568]
Length = 330
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP +GK+ +
Sbjct: 20 LTLISLEDWALVTLNGPDRVKYLQGQVTADIEALPADSHVLCGHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLS-- 103
E LE RS DS + ++ Y + S + I + GV S
Sbjct: 80 GEGFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAADSEAVLLGVAGFQARAALAGVFNSLP 138
Query: 104 -------WNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ E T + S ERF ++A+ L+ + H + +D + + L I
Sbjct: 139 DAEHQVVQDGETTLLHFSLPAERFLLVTTAAVAEQLVDKL--HEQAELNDSQQWLTLDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + L+GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 197 AGY--PVIDAANSGQFIPQATNLQALDGISFSKGCYTGQEMVARAKFRGANKRALYWLEG 254
Query: 210 TDDLPPSGSPILTDDIEI 227
P + +D+E+
Sbjct: 255 KAGRVPQAA----EDVEL 268
>gi|55379206|ref|YP_137056.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
gi|55231931|gb|AAV47350.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
Length = 361
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
E ++ D+ ++ D L++R G N + +T+ L + G P D
Sbjct: 187 EESYDVVCSADDAETVFDTLVNR--GLN-AVPFGYQTWETLTLEAGT--PLFDTEIEGAL 241
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P+D + L N + KGCY+GQEVVSRI++R +R ++ + P G+ + D
Sbjct: 242 PND--LGLRNALDFEKGCYVGQEVVSRIENRGHPTQR-LVGLAVEACPDPGAAVFAGDEH 298
Query: 227 IG 228
+G
Sbjct: 299 VG 300
>gi|119776082|ref|YP_928822.1| hypothetical protein Sama_2950 [Shewanella amazonensis SB2B]
gi|119768582|gb|ABM01153.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 321
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 31/234 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + V G+ F+ +TAD+ L R A P+G++L F K+ +
Sbjct: 24 LNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWGAHCDPKGRMLATFRTFKLGDALM 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+LE RS + + +L Y + S + +L + + F+ F A+
Sbjct: 84 MLE-PRSALEVSLAQLKKYAVFSKAELVDMSSELTLLGVSGPEA---AGFVARHFGTAEA 139
Query: 126 LLHRTWGHN---------------------EKIASDI---KTYHELRINHGIVDPN-TDF 160
+ T EK + + L I G PN
Sbjct: 140 DVFSTEQGTVLKDGERFILILDKANACALIEKSGQPLYGAGVWQALEIRAGY--PNIAAG 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
S P + L GIS KGCY+GQE V+R ++R ++ I+ G P
Sbjct: 198 HASEYIPQMCNLQALGGISFNKGCYMGQETVARTKYRGGNKRALYILFGESQTP 251
>gi|316984646|gb|EFV63610.1| glycine cleavage T protein [Neisseria meningitidis H44/76]
gi|325134208|gb|EGC56857.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M13399]
gi|325206147|gb|ADZ01600.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M04-240196]
Length = 287
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123
++ + +L + LR+ + EI V QE + + ++ +
Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 129
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T T +
Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239
>gi|145296576|ref|YP_001139397.1| hypothetical protein cgR_2484 [Corynebacterium glutamicum R]
gi|140846496|dbj|BAF55495.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 373
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 132
Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117
L+ ++ D+LI K++F+ S V +E + ++ QE + ++ F +D
Sbjct: 133 LDTSAAEFDTLIGFLTKMIFW---SEVTVEEADL-AIITLLGQEISLPDAVFARRVDWNG 188
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169
R +A + G ++ + + K Y R+ D TI PH+
Sbjct: 189 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 247
Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220
+ L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I
Sbjct: 248 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 304
Query: 221 LTDDIEIGTLGVVV 234
+G LG VV
Sbjct: 305 KAGARTVGRLGTVV 318
>gi|269140276|ref|YP_003296977.1| glycine cleavage T protein [Edwardsiella tarda EIB202]
gi|267985937|gb|ACY85766.1| glycine cleavage T protein [Edwardsiella tarda EIB202]
gi|304560103|gb|ADM42767.1| Folate-dependent protein [Edwardsiella tarda FL6-60]
Length = 332
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+D + L I GI +P+ D FLP + + L GIS +KGCY GQE+V+R
Sbjct: 186 ADSAQWLALDIEAGIPLIDEPSCDRFLPQAVN-----LQALGGISFSKGCYSGQEMVARA 240
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++R R+ + G+ + P S +D+E+
Sbjct: 241 KYRGANRRALFWLRGSAERLPHAS----EDLEL 269
>gi|167738162|ref|ZP_02410936.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 14]
Length = 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R
Sbjct: 41 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 92
Query: 206 ---IITGTD 211
+ GTD
Sbjct: 93 LAHVAAGTD 101
>gi|262371763|ref|ZP_06065042.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311788|gb|EEY92873.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 240
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A FLQ +T V L +R +AI +G+I I K+ ++F L + +
Sbjct: 13 GVDAQKFLQGQVTIHVERLALNESRYTAICDLKGRIHFGLWIKKLNTESFELVTTHDQAE 72
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
+ + S ++++ I V F I FS NE
Sbjct: 73 EFAKHIKKFGAFSK--MKLEEIGSV---------FPTIHGIQTEFS-----------SNE 110
Query: 136 KIASDIKTYH--ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+DI T+ ++ + T+ L P + + +G+ KGCY+GQE+V+R
Sbjct: 111 ---TDIYTWQIEAIKSGQAWISKTTEHL---FQPQELRLHQRDGVHFDKGCYLGQEIVAR 164
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
+ + + +I DLP + + D + ++ + G AL IA+
Sbjct: 165 LWFKAKPKHWLHLIHAKGDLPAPATQLNKDVEVVNSVNINDGYLALVIAK 214
>gi|50119703|ref|YP_048870.1| putative global regulator [Pectobacterium atrosepticum SCRI1043]
gi|81646141|sp|Q6D961|YGFZ_ERWCT RecName: Full=tRNA-modifying protein ygfZ
gi|49610229|emb|CAG73672.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 333
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R
Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247
Query: 198 NIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227
++ + G + +P +G DD+E+
Sbjct: 248 GANKRALYWLAGKANKVPQAG-----DDLEL 273
>gi|291333966|gb|ADD93643.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C694]
Length = 99
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+ +++ G FLQ +++ D+ L + SA+LTPQGK + F + I+ D
Sbjct: 5 LNNRKILELKGSDCKKFLQNLVSNDINLLDQGLVY-SALLTPQGKYIADFFVVPID-DGM 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95
+++ +L+D+L YKLRS+V I+ Q
Sbjct: 63 RIDVHAELAKTLLDRLNIYKLRSDVEIKKQ 92
>gi|167815348|ref|ZP_02447028.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 91]
Length = 178
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R
Sbjct: 47 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTA 98
Query: 206 ---IITGTD 211
+ GTD
Sbjct: 99 LAHVAAGTD 107
>gi|167581611|ref|ZP_02374485.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis TXDOH]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 43/243 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
L + V G A FL +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 65 -----------------FILEIDRSKRDSLIDKL--------------LFYKLRSNVIIE 93
F+L D+ + +F L + +
Sbjct: 101 LLVSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGLAGDVRAALSGIFDALPDGIHTK 160
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ G ++ + +I R + D L ++++ + + ++R
Sbjct: 161 VDAPAGALVRLPDAAGRARYLWIAARAEL-DARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 154 VD-PNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IIT 208
V P + F+P + D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 220 VTLPAVEQFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAV 274
Query: 209 GTD 211
GTD
Sbjct: 275 GTD 277
>gi|254430061|ref|ZP_05043768.1| folate-binding protein YgfZ [Alcanivorax sp. DG881]
gi|196196230|gb|EDX91189.1| folate-binding protein YgfZ [Alcanivorax sp. DG881]
Length = 315
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 102/220 (46%), Gaps = 36/220 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFLISKIEEDTF 65
+ I+ G+ A +LQ ++ D+ +++ G + L+ +G+ L+ I + + D +
Sbjct: 31 AVIRAYGEEAGHYLQGQLSCDL----HEVDNGGHLTGMHLSLKGRGLVSVRIVQ-DGDDY 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQE--HTFSNSSFID 117
++ + +++I L+ Y+LR+ V ++ ++G + + + E + N +
Sbjct: 86 LMLCPAGQSEAVIKSLMKYRLRAKVEFQVDEQAVLMGLSGALPATSPEPGQSGRNGQGLW 145
Query: 118 ERFSIADVLL--------HRTWG--HNEKIASDIKTYHELRIN--HGIVDPNTD--FLPS 163
R+ D L W ++ A++ + + I+ G+V P + FLP
Sbjct: 146 LRYPNTDHALLITDTEQAESVWTVLALDRAATNANGWRQADIDAGEGMVYPGAEDLFLPQ 205
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ D+ G++ KGCY GQEVV+R+ + +++R
Sbjct: 206 VLN-----YDVTAGVNFKKGCYTGQEVVARMHFKGKLKQR 240
>gi|294624876|ref|ZP_06703533.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665039|ref|ZP_06730346.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600835|gb|EFF44915.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605196|gb|EFF48540.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 273
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + T +G + D
Sbjct: 169 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETGAAVNAGDAVALDGSA 227
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266
IGT+ V G ALA+ ++ + G AL HG R +A
Sbjct: 228 IGTVVSVAGNLALAVLPLELT---LDAGTALQAGTHGARPRA 266
>gi|301027408|ref|ZP_07190745.1| folate-binding protein YgfZ [Escherichia coli MS 69-1]
gi|300394916|gb|EFJ78454.1| folate-binding protein YgfZ [Escherichia coli MS 69-1]
Length = 295
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + + D F
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFR-DGDGF 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID-- 117
RS R+S + +L Y + S VII + + G + FS +
Sbjct: 62 AWIERRSVRESQLTELKKYAVFSKVIIAPDDERVLLGVAGFQARAALANIFSELPSKEKQ 121
Query: 118 ----------------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF-- 177
Query: 156 PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDL 213
P D S F P + L GIS KGCY GQE+V+R + R ++ ++TG+ L
Sbjct: 178 PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRL 237
Query: 214 PPSGSPI 220
P +G +
Sbjct: 238 PEAGEDL 244
>gi|171319766|ref|ZP_02908853.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
gi|171095002|gb|EDT40027.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
Length = 310
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 106/279 (37%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVR 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---------------------------------NVII 92
+L + + + ++ +L + LRS V +
Sbjct: 63 LL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVRNALSGIFDALPDGVHV 121
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 122 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGTLPVVSPAVWDWLDVRAGEP 180
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 181 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVP 235
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + + G+VV A +D +
Sbjct: 236 GETDTVHAGVELFHSEDAGQPCGMVVNAAAAPAGGVDAL 274
>gi|270264911|ref|ZP_06193175.1| putative global regulator [Serratia odorifera 4Rx13]
gi|270041209|gb|EFA14309.1| putative global regulator [Serratia odorifera 4Rx13]
Length = 328
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 36/256 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLEDWALVTLSGPDRVKYLQGQVTADIEALAADRHVLCAHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLS-- 103
ED LE RS DS + ++ Y + S + I + + GV S
Sbjct: 80 GEDFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAVDSEAVLLGVAGFQARAALAGVFNSLP 138
Query: 104 -------WNQEHTFSNSSFIDERF---SIADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152
+ E T + S ERF + A V T NE+ +D + + L I G
Sbjct: 139 DAEHQVVQDGETTLLHFSAPAERFLLVTTAAVAEQLTVKLNEQAELNDSQQWLTLDIEAG 198
Query: 153 IVDPNTDFLPS-TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
P D S + P + L GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 199 Y--PVIDAANSGQLIPQATNLQALEGISFSKGCYTGQEMVARAKFRGANKRALYWLEGN- 255
Query: 212 DLPPSGSPILTDDIEI 227
P+ +D+E+
Sbjct: 256 ---AGRVPLAAEDLEL 268
>gi|296157857|ref|ZP_06840691.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1]
gi|295892103|gb|EFG71887.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
DI+ E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R
Sbjct: 221 DIRA-GEPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGT 271
Query: 200 IRKRPMI--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
I++R + + G D +G+ + D G+VV + +D
Sbjct: 272 IKRRTSLANVAGEPDSVRAGAELFHSDDPGQPCGMVVNAASAPEGGVD 319
>gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99]
gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 363
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+Q N+ + M++ G+ D P +G +L + +G +
Sbjct: 241 IGAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSTDRPSTGDSVLAGERSVGRV 298
Query: 231 GVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKASFP 269
G VV G ALA+A R D A+ G T+ + S P
Sbjct: 299 GTVVDHVDLGPVALALAKRGLPADTALMTGAEATIPALIDAQSLP 343
>gi|85712969|ref|ZP_01044008.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
gi|85693207|gb|EAQ31166.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
Length = 299
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + V G A FLQ +TA+V L SA P GK L F + ++ F
Sbjct: 19 LASYGLLSVTGDDARSFLQGQLTANVNALKPGDLCYSAHCEPTGKTLSVFWLYCHSDNEF 78
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSFIDERFS 121
L + S + + Y + + V E + + G+V S ++ N + + +
Sbjct: 79 WLILKHSAIAPSLAQFEKYGVFNKVTFEDKSSDLNLIGLVGS-SETFELPNEADLIAKLK 137
Query: 122 IAD-----VLLHRTWGHNEKIASDIKTYHELRINHGIVDPN-TDFLPSTIFPHDALMDLL 175
+ VL++++ + SD K + L I V P L P +
Sbjct: 138 VGSEPNQFVLVYKS---EIESNSDEKLWDALEIER--VRPQLISELTQQFVPQMLNVQAW 192
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+GI KGCYIGQE V+R+++ ++ ++GT +P
Sbjct: 193 DGIDFKKGCYIGQETVARMRYLGKQKRALFRVSGTAHVP 231
>gi|90580316|ref|ZP_01236123.1| hypothetical protein VAS14_20331 [Vibrio angustum S14]
gi|90438618|gb|EAS63802.1| hypothetical protein VAS14_20331 [Vibrio angustum S14]
Length = 327
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 37/244 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + +LQ +T D+++L + +A +GK+ I I+
Sbjct: 29 LDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVMRIFHIDNGYG 88
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L+ ++ + I +L Y + S +I VVL + E S ID F+ +D
Sbjct: 89 YLQ-RQTVMATQIPELKKYAVFSKT--DINQSTDVVLGLSGEQA---QSAIDNYFTGSDD 142
Query: 126 LLHRT-----------W------GHNEKIA---------SDIKTYHELRINHGI--VDPN 157
+ H W H E +A +D ++ I + V+
Sbjct: 143 VRHNDTATAVKVDNLRWFIITPIEHAEAVAQHFAANATLTDTALWNLYDIKAALPRVEAA 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P
Sbjct: 203 TEL---EFIPQAMNLQSVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259
Query: 218 SPIL 221
L
Sbjct: 260 GDAL 263
>gi|257094049|ref|YP_003167690.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046573|gb|ACV35761.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 338
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 51/235 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I V G A FL +T+D+ L A+ SA + +G++L FL+ + D +
Sbjct: 43 LTHLRLIAVGGPEAAVFLHNQVTSDIKHLATDAAQHSAWCSAKGRMLASFLVFRSGAD-Y 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------ 107
L++ ++ +L + LRS V I V LS N+E
Sbjct: 102 QLQLSADLLTMIVKRLQMFVLRSKVTI-------VDLSGNREIFGLAGPHAVEALQALGL 154
Query: 108 -------HTFSNSSFI-----DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRI 149
+T S+ + RF I A L R H + + + + +++
Sbjct: 155 PVPDGPLNTAVGSAGLVIRLDSARFQIVTSTEDAAALWRRLAAHARPVGTAVWQWLDIQA 214
Query: 150 NHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
++ T +F+P A + L G+S KGCY GQE+++R Q+ +++
Sbjct: 215 GIPLITERTREEFVPQM-----ANFERLGGVSFHKGCYPGQEIIARTQYLGKVKR 264
>gi|323526019|ref|YP_004228172.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001]
gi|323383021|gb|ADX55112.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
DI+ E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R
Sbjct: 239 DIRA-GEPRITQPVVE---QFVPQMVN-----FDVLGAVNFKKGCYPGQEVVARSQYRGT 289
Query: 200 IRKRPMI--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
I++R + + G D +G+ + D G+VV A AR VD
Sbjct: 290 IKRRTSLANVAGELDSVKAGAELFHSDDPGQPCGMVVNA---ASARHGGVD 337
>gi|256821968|ref|YP_003145931.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069]
gi|256795507|gb|ACV26163.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069]
Length = 312
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + I+V G A FLQ +T D+ + + A QG++ F K +D +
Sbjct: 30 LGHYGIIRVHGGDAHKFLQGQLTCDLDKVTDQQASLGGFCNVQGRLHGIFFTIKYGDD-Y 88
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-----SSFIDERF 120
+L + + + L++KL Y + V + ++ + Q+ +N S +
Sbjct: 89 LLLVPKEGLEHLLNKLKMYAVFFKVELTDASLDFQIWGHTQKGATTNFAEDMSLVVTRDK 148
Query: 121 SIADVLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDFLPS 163
+ ++ L+ + + IA +D+ + + I I + L
Sbjct: 149 GVTEIHLNSLFNASFMIAEKEDGSAIIKALEGTTLADVNAWDYIEIQAHIPLVFEETLEE 208
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ PH + + G+S KGCY GQE+V+R+ +R ++ ++ D
Sbjct: 209 -LLPHFIGLPQVGGVSFDKGCYTGQEIVARMHYRGKLKTHALLAYSKD 255
>gi|227328389|ref|ZP_03832413.1| putative global regulator [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 333
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L + + + + G + +LQ +TADV LP A +GK+ + E
Sbjct: 28 ISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHTLCAHCDAKGKMWSNLRLFHHGEG 87
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSW--NQE 107
+E R+ RD+ + +L Y + S I I+ + V S + E
Sbjct: 88 FAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPDVE 146
Query: 108 H--------TFSNSSFIDERFSI------ADVLLHRTWGHNEKIA-SDIKTYHELRINHG 152
H T + + ERF + + LL + +K++ +D + L I G
Sbjct: 147 HPVVQHEGATLLHFAHPAERFLLVLSPEHSASLLEQL---GDKVSLNDSCQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-T 210
P D S F P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 204 --QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261
Query: 211 DDLPPSGSPILTDDIEI 227
+ +P +G DD+E+
Sbjct: 262 NKVPQAG-----DDLEL 273
>gi|303286257|ref|XP_003062418.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455935|gb|EEH53237.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 363
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 35/156 (22%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
Y R G+ + + +T P + ++ L+G+S KGCYIGQE+ +R ++RK
Sbjct: 206 AYRRHRYLRGVAEGTAEL--ATRLPLECNLEGLHGVSFDKGCYIGQELTARTHFVGVVRK 263
Query: 203 RPMIIT------------------GTDDLPPSGSPILTDDIEIGTLGVVV---GKKALAI 241
R I + PSGS E G +G VV G LA+
Sbjct: 264 RLAPIAFRSAEDAAAALASGGTVHSSAAAGPSGS-----KRERGGVGKVVAVEGDVGLAM 318
Query: 242 ARIDKVDHAIKKGMALTVHG-----VRVKASFPHWY 272
R+ + + M TV G + AS P W+
Sbjct: 319 MRVAAIGSDAR--MWATVDGGGEVEIETPASAPSWW 352
>gi|289676642|ref|ZP_06497532.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae FF5]
Length = 281
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+T +D+ P L + +G VV
Sbjct: 233 LYRLTLSDEEIPQPGTALFSPVHASAVGNVV 263
>gi|261820171|ref|YP_003258277.1| global regulator [Pectobacterium wasabiae WPP163]
gi|261604184|gb|ACX86670.1| folate-binding protein YgfZ [Pectobacterium wasabiae WPP163]
Length = 333
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + LNGIS +KGCY GQE+V+R ++R
Sbjct: 190 NDSRQWLTLDIEAG--QPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYR 247
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + G + P DD+E+
Sbjct: 248 GANKRALYWLAGKANRVPQAG----DDLEL 273
>gi|170718457|ref|YP_001783673.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus
somnus 2336]
gi|168826586|gb|ACA31957.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus
somnus 2336]
Length = 277
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
L I V G A FLQ +T DV K+A G + LT P+GK+ F + +
Sbjct: 5 LKQYGLIYVEGVDAEKFLQGQLTCDVT----KLAIGQSTLTAHCDPKGKVNSLFRLIRHA 60
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFIDER 119
E F L I + + + +L Y + S V + I G++ + I +
Sbjct: 61 EQQFYLLIRQDLLNHGLAQLKKYAVFSQVTFSEKNWTIVGML-----DQDLKECGAISPQ 115
Query: 120 FSIADVLLHRTWGHNEKIA----SDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171
I D+ + +K++ D + + L + G + +F+P + L
Sbjct: 116 IRI-DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTIIGQGEFIPQAL----NL 170
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
++ IS KGCYIGQE ++R ++R I KR M +
Sbjct: 171 QEIEQAISFQKGCYIGQETIARAKYRG-INKRAMYL 205
>gi|330964532|gb|EGH64792.1| hypothetical protein PSYAC_07740 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 293
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +D++P G+ + +
Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230
>gi|218768283|ref|YP_002342795.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
gi|121052291|emb|CAM08620.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
Length = 288
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124
++ + +L + LR+ + EI G L + E + N +F ++ S I
Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 130
Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ L T + A + HE+R + + T A+ +
Sbjct: 131 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +GS + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAADGEEAG 240
>gi|113461437|ref|YP_719506.1| aminomethyl transferase [Haemophilus somnus 129PT]
gi|112823480|gb|ABI25569.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 277
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKIE 61
L I V G A FLQ +T DV K+A G + LT P+GK+ F + +
Sbjct: 5 LKQYGLIYVEGVDAEKFLQGQLTCDVT----KLAIGQSTLTAHCDPKGKVNSLFRLIRHA 60
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFIDER 119
E F L I + + + +L Y S V + I G++ + I +
Sbjct: 61 EQQFYLLIRQDLLNHGLAQLKKYAFFSQVTFSEKNWTIVGML-----DQDLKECGAISPQ 115
Query: 120 FSIADVLLHRTWGHNEKIA----SDIKTYHELRINHGI----VDPNTDFLPSTIFPHDAL 171
I D+ + +K++ D + + L + G + +F+P + L
Sbjct: 116 IRI-DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTIIGQGEFIPQAL----NL 170
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
++ IS KGCYIGQE ++R ++R I KR M +
Sbjct: 171 QEIEQAISFQKGCYIGQETIARAKYRG-INKRAMYL 205
>gi|313127513|ref|YP_004037783.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
gi|312293878|gb|ADQ68338.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
Length = 364
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ L N + KGCY+GQEVVS++++R +R ++ + LP SG+ + D +G +
Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSKVENRGRPSQR-LVGLRPEALPESGAAVFNGDSSVGEV 302
>gi|213026049|ref|ZP_03340496.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 200
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 106 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 163
Query: 192 SRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G +P +G +D+E+
Sbjct: 164 ARAKFRGANKRALWLLAGKASRVPEAG-----EDLEL 195
>gi|28871370|ref|NP_793989.1| hypothetical protein PSPTO_4228 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971130|ref|ZP_03399249.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301381854|ref|ZP_07230272.1| hypothetical protein PsyrptM_04440 [Pseudomonas syringae pv. tomato
Max13]
gi|302059023|ref|ZP_07250564.1| hypothetical protein PsyrptK_03467 [Pseudomonas syringae pv. tomato
K40]
gi|28854621|gb|AAO57684.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213924119|gb|EEB57695.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 315
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +D++P G+ + +
Sbjct: 233 LYRLTLRSDEIPAPGTALFS 252
>gi|38234484|ref|NP_940251.1| hypothetical protein DIP1917 [Corynebacterium diphtheriae NCTC
13129]
gi|38200747|emb|CAE50450.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 353
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 58/279 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G+ A FL +++ ++ LP+ A + L QG ++ + I +E F
Sbjct: 45 SHRGVLCISGEDAAVFLNNLVSQKLIDLPHPWAGEALDLDIQGHVVHHMEIIATDE-VFY 103
Query: 67 LEIDRSKRDSL---IDKLLFYKLRSNVIIEIQPINGVVLSW-NQEH-----------TFS 111
+ + ++ +SL +++F+ S V IE+ I+ V+S + +H +
Sbjct: 104 VHVPAAQLESLHTFFTRMIFW---SKVTIEV--IDAAVISVISAQHLDALVDVPLPEALA 158
Query: 112 NSSFIDERFSIADVLLHRT---------WGHNEKIASDIKTYHELRINHGIVDPNTDF-L 161
S ID D+L+ R H + A + Y R+ V P +
Sbjct: 159 VSPVIDFSLPRRDILVPRASLMAVAASLQEHGFQPAG-MMAYTAARVRS--VQPVMSLDM 215
Query: 162 PSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTD 211
+T PH+A D + + L KGCY GQE V R++ N+ R +++
Sbjct: 216 DATTIPHEAASLIGRGDHIGAVHLNKGCYRGQETVGRVE--NLGRSPRVLVMVLIDGSAP 273
Query: 212 DLPPSGSPI------------LTDDIEIGTLGVVVGKKA 238
+ P +P+ + DD E+G +G+ V K++
Sbjct: 274 EQPHPAAPLTAGGRTVGFLGTVVDDFELGPIGLAVVKRS 312
>gi|317493828|ref|ZP_07952245.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918155|gb|EFV39497.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 328
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS-TIFPHDALMDLLNGIS 179
S+A+ L+ + G + +D + + EL I G P D S + P + LNGI
Sbjct: 169 SMAEALVEKLQGSAQ--FNDSQQWVELDIEAG--QPVIDVENSGQLIPQATNLQALNGIC 224
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
KGCY GQE+V+R ++R ++ + G+ S P +D+E+
Sbjct: 225 FKKGCYTGQEMVARAKYRGANKRALYWLQGS----ASRVPQAGEDLEL 268
>gi|330950069|gb|EGH50329.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae Cit 7]
Length = 230
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V NT +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 93 QIRVGIGQVFGNTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 147
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +++P G+ + +
Sbjct: 148 LYRLTLSGEEIPQPGTALFS 167
>gi|145300371|ref|YP_001143212.1| aminomethyltransferase related to GcvT [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853143|gb|ABO91464.1| predicted aminomethyltransferase related to GcvT [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 303
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ L+GIS TKGCY+GQE V+R ++R + ++ GT P + L +I++G
Sbjct: 193 LQALDGISFTKGCYMGQETVARAKYRGANNRALFVLAGTASEPVACGDAL--EIQLG 247
>gi|332525885|ref|ZP_08402026.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2]
gi|332109436|gb|EGJ10359.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2]
Length = 318
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
++L+ G++ KGCY GQE+V+R Q+R +++R + P G + D G
Sbjct: 204 LELVGGVNFQKGCYPGQEIVARSQYRGTLKRRAFLFDADAPAAP-GQDVYAADDPAQPAG 262
Query: 232 VVV-------GKKALAIARIDKVDHAIKKGMAL 257
+VV G A A+ K+ A+ G+AL
Sbjct: 263 MVVAAAPAPDGSGAWAVLAETKI-AALADGVAL 294
>gi|78066664|ref|YP_369433.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
gi|77967409|gb|ABB08789.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
Length = 344
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59
L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLGSFLTWRAGHGVR 96
Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92
+ +D F+L ++K D L +F L V +
Sbjct: 97 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVRDVLSGIFDALPDGVHV 155
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L ++ + + ++R
Sbjct: 156 KVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALGSSLPVVSPAVWDWLDIRAGEP 214
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQE+V+R Q+R I++R + +
Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAHVA 269
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|21231578|ref|NP_637495.1| hypothetical protein XCC2133 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768300|ref|YP_243062.1| hypothetical protein XC_1980 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991439|ref|YP_001903449.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris str.
B100]
gi|21113265|gb|AAM41419.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573632|gb|AAY49042.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733199|emb|CAP51397.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris]
Length = 290
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + ++++ G A+ F A DV L + +A LT +G+++ F + + E+
Sbjct: 15 LHDMQYVRLSGPDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLRDEDAQL 74
Query: 66 ILEIDRSKRDSLIDKLLFY----KLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++ + + +L + KLR + + + Q H + I+
Sbjct: 75 LMLLPDGNAAEIAAQLGRFVFRRKLRITEIALTAQGAFAAPARAQAAHADVAADAIE--L 132
Query: 121 SIADVLLHRTW--GHNEKIASDI------KTYHELRINHGIVD-PNTDFLPSTIFPHDAL 171
+ L RT ++ +A+ I + + G+V P+T T P
Sbjct: 133 DMGSPALPRTLVLRASDTLAAPIDLPNMDAAWRRADLQLGLVRLPDTQREQWT--PQQLA 190
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D L+ S+ KGCY GQE+V+R H KR + + TD G + D E+G++
Sbjct: 191 LDQLHAFSVKKGCYPGQEIVART-HFLGKAKRAVHLLETDAAVAPGDAVRLDGAEVGSVV 249
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTV 259
ALA+ ++ AI+ GM L+
Sbjct: 250 SCAENVALAVL---PLELAIEAGMTLSA 274
>gi|87118920|ref|ZP_01074819.1| Glycine cleavage T protein [Marinomonas sp. MED121]
gi|86166554|gb|EAQ67820.1| Glycine cleavage T protein [Marinomonas sp. MED121]
Length = 301
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 87/224 (38%), Gaps = 29/224 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEEDTFILEID 70
+K+ G + FLQ + D L A+ +G+++ ++ + + ++ IL D
Sbjct: 26 LKLSGADTVKFLQGQTSCDFSALSQTQGLQGAVCNIKGRVIANFYALQQADDILLILASD 85
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADVLLHR 129
L++ L + + V + +N + E+ FS I E F L
Sbjct: 86 ------LVETLQSHLKKYAVFFKTALVNATQ-DYQIEYIFSQDKLIPQEDFPYPCQELEH 138
Query: 130 TWGHNEKIASDIKTYHELRINH-----GIVDPNTDFL---------------PSTIFPHD 169
+ +++ Y +R G+ D N + + P
Sbjct: 139 NHSLIQICEANVNQYLSIRPTQSSRALGLPDLNDELIGLNLISGHAIINKETSEKFIPQM 198
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
M +G++ KGCY GQE+V+R+Q+R ++K + + + L
Sbjct: 199 LNMQFTHGVNFKKGCYTGQEIVARMQYRGNLKKHLYLFSAANTL 242
>gi|302132822|ref|ZP_07258812.1| hypothetical protein PsyrptN_15597 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 293
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +D++P G+ + +
Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230
>gi|223590165|sp|A5DQ50|CAF17_PICGU RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|190348778|gb|EDK41303.2| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC
6260]
Length = 436
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+I P + +D NG+SL KGCY+GQE+ R + IRKR
Sbjct: 270 SILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309
>gi|117619784|ref|YP_855333.1| chain A, Ygfz protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561191|gb|ABK38139.1| chain A, Ygfz Protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 301
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ L+GIS TKGCY+GQE V+R ++R + +++GT P + L +I++G
Sbjct: 191 LQALDGISFTKGCYMGQETVARAKYRGANNRALFVLSGTATTPVASGDTL--EIQLG 245
>gi|330502433|ref|YP_004379302.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01]
gi|328916719|gb|AEB57550.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01]
Length = 313
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 35/220 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + V G A FLQ +T ++ L + A TP+G++L F I ++ D +
Sbjct: 10 LDHEGLLAVRGADAAKFLQGQVTCNLNYLSASQSSLGARCTPKGRMLSSFRIVPVD-DGY 68
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHT 109
+L + R +S L Y + S + + G+ L +
Sbjct: 69 LLAMARELIESQQADLQKYAVFSKSKLSDESAAWVRFGLAGGDAVLGELGLQLGTASDSI 128
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGIVDPNT 158
S I R S L E++ + ++R G V T
Sbjct: 129 TSAGPLIAVRLSDGRAELWAPAAETEQLQGRLAAALPQAPLNDWLLAQVRAGVGQVFGAT 188
Query: 159 D--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
F+P I + L G+S KGCY GQE+V+R+Q+
Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQY 223
>gi|325266245|ref|ZP_08132924.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
gi|324982207|gb|EGC17840.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
Length = 282
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 22/239 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF-ILEID 70
I+V G FL + D+ L K A + TP+G+++ L ++ F IL D
Sbjct: 11 IRVTGDDRHEFLHNQFSNDIKNLSEKTACYATYNTPKGRVIANMLAYCADDAVFLILAAD 70
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNSSFIDERFSIADVLLH 128
+++ + +L + LR+ V +E+ GV L N + + + + A +
Sbjct: 71 LAEK--VAKRLRMFVLRAKVQMEVLADWGVAGCLPENAPVVYPSEPKLQLSCNEAGQIEL 128
Query: 129 RTWG-----------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
G ++ A HE+ + + T T + G
Sbjct: 129 PHGGCLTLAPKSDLPAHDAAAESAWNRHEILCGYPWISAATS---ETCVAQMLNQHTIGG 185
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
+ KGCY GQE+++R Q+R + KR + + P+G P+ D + G+V+ +
Sbjct: 186 VHFRKGCYPGQEIIARAQYRGQV-KRGLAVAENAVPQPAGVPV--QDAQQAEAGIVINQ 241
>gi|146412820|ref|XP_001482381.1| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC
6260]
Length = 436
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+I P + +D NG+SL KGCY+GQE+ R + IRKR
Sbjct: 270 SILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309
>gi|331015591|gb|EGH95647.1| hypothetical protein PLA106_06430 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 293
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +D++P G+ + +
Sbjct: 211 LYRLTLRSDEIPAPGTALFS 230
>gi|167619726|ref|ZP_02388357.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis Bt4]
Length = 174
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTD 211
D++ G++ KGCY GQEVV+R Q+R I++R + GTD
Sbjct: 61 FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTD 103
>gi|124516642|gb|EAY58150.1| putative aminomethyltransferase [Leptospirillum rubarum]
Length = 334
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G+ FLQ I + D+L K S L P+ +IL ED L
Sbjct: 27 IFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIALFPPA 85
Query: 72 SKRDSLID---KLLFYKLRSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDER 119
R+ ++ K LF++ ++ + I + P VL ++ FS SSF +
Sbjct: 86 GTREEFVNHLKKYLFFRTKAKITDMSDHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145
Query: 120 FSIADVLLHRT-WGHN-------------EKIASDIKTYHELRINHG------------I 153
+ VL+H T + HN ++ + K+ + N G +
Sbjct: 146 -NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSNKGGVLLDESSYLAYL 204
Query: 154 VDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ PS + FP +A +D + G+S KGCY+GQE V+R++ + + +
Sbjct: 205 TEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNR 256
>gi|158334606|ref|YP_001515778.1| glycine cleavage T protein [Acaryochloris marina MBIC11017]
gi|158304847|gb|ABW26464.1| glycine cleavage T protein, putative [Acaryochloris marina
MBIC11017]
Length = 354
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
K + +LR++ G P+ + L P +A L IS KGCYIGQE ++R+ ++
Sbjct: 217 KVWEQLRVSEGRPKPDAE-LTEDFNPLEA--GLWQTISFDKGCYIGQETIARLNTYQGVK 273
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMAL 257
+R I + + +PI +D ++G L +V G L + D + +
Sbjct: 274 QRLWGIQLGESVSVD-TPITLEDKKVGVLTSLVETAEGPVGLGYVKTKAGDAGAQVSVG- 331
Query: 258 TVHGVRVKASF---PHW 271
TV G V+ F P W
Sbjct: 332 TVTGTLVEVPFLTYPQW 348
>gi|62181559|ref|YP_217976.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224584838|ref|YP_002638636.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|75481001|sp|Q57K67|YGFZ_SALCH RecName: Full=tRNA-modifying protein ygfZ
gi|254814151|sp|C0PY21|YGFZ_SALPC RecName: Full=tRNA-modifying protein ygfZ
gi|62129192|gb|AAX66895.1| putative aminomethyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224469365|gb|ACN47195.1| hypothetical protein SPC_3108 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322716040|gb|EFZ07611.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 326
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PAIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267
>gi|330981456|gb|EGH79559.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 293
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+T +D+ P L + +G VV
Sbjct: 211 LYRLTLSDEEIPQPGTALFSPVHASAVGNVV 241
>gi|172038986|ref|YP_001805487.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
gi|171700440|gb|ACB53421.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
Length = 368
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P+ + L P +A L + IS KGCYIGQE ++R+ ++
Sbjct: 232 RVWQQLRIKQGRPYPDQE-LTEDYNPLEA--GLWSSISFDKGCYIGQETIARLNTYQGVK 288
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTV 259
+R + T + +G+ ++ DD ++G L + + ++ L +A + A +G+ +T+
Sbjct: 289 QRLWGVKLTQPV-KAGNTVMVDDKKVGILTSSIQLEEECLGLAYVKT--KAGGEGLKVTI 345
>gi|121634976|ref|YP_975221.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|120866682|emb|CAM10434.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|261392454|emb|CAX50003.1| putative aminomethyl transferase [Neisseria meningitidis 8013]
gi|325132534|gb|EGC55227.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190]
gi|325138308|gb|EGC60877.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
ES14902]
Length = 288
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVN-RGDDLLLIMAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNS---SFIDERFS---IA 123
++ + +L + LR+ + EI G L+ + E + +F E S +
Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPCLAFTAECGSDGICS 130
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+ + + T A+ +
Sbjct: 131 VVLPHRGILHIAPETALPPYDAAAENAWRLHEILSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 240
>gi|291086195|ref|ZP_06355083.2| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220]
gi|291068505|gb|EFE06614.1| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220]
Length = 306
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 40/253 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + D F
Sbjct: 3 LDDWALATITGADSEKYIQGQVTADVSQMTEHQHVLAAHCDAKGKMWSNLRLFR-NSDGF 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID-- 117
R+ RD+ + +L Y + S V+I + + G + FS D
Sbjct: 62 AWLERRNLRDAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFSELPNSDKQ 121
Query: 118 ----------------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
ERF + A+ L+ + G E ++ + + L I GI
Sbjct: 122 VISEGACTILWFEHPAERFLLIVDVATAESLVEKLRGEAE--LNNSQQWLALDIEAGI-- 177
Query: 156 PNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
P D S F P + L GIS KGCY GQE+V+R + R ++ + GT
Sbjct: 178 PVIDTANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGT---- 233
Query: 215 PSGSPILTDDIEI 227
S P +D+E+
Sbjct: 234 ASRVPEAGEDLEL 246
>gi|187923927|ref|YP_001895569.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN]
gi|187715121|gb|ACD16345.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN]
Length = 357
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R
Sbjct: 226 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTS 277
Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+ + G D +G+ + D G+VV + +D
Sbjct: 278 LANVAGELDTVHAGAELFHSDDPGQPCGMVVNAASAPDGGVD 319
>gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
smegmatis str. MC2 155]
gi|118175099|gb|ABK75995.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
smegmatis str. MC2 155]
Length = 359
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ N+ R M++ G+ D P +G P+L +G L
Sbjct: 239 VGAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSSDRPATGDPVLAGGRTVGRL 296
Query: 231 GVVV-----GKKALAIAR 243
G VV G ALA+ +
Sbjct: 297 GTVVDHVDDGPIALALVK 314
>gi|323495995|ref|ZP_08101059.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326]
gi|323318957|gb|EGA71904.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 39/238 (16%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ +L++ I + G+ +LQ +T DV+TL + A +GK+ F +
Sbjct: 21 LALAHLTSWGAINMVGQDKKSYLQGQVTCDVVTLAEDQSTFGAHCDAKGKVWSAFRLFH- 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLSWNQ 106
D + + +S D+ + +L Y + S V I IQ I+ + S
Sbjct: 80 HNDGYAMLQPKSAIDAELVELKKYAIFSKVEITQSQDIVLGLVGQNAIQFIDTITESRGD 139
Query: 107 EHTFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGI--- 153
F + + +R+ LL + +++ S I + L I +
Sbjct: 140 VRPFPGGTAVMVDQQRW-----LLMLSEESAQQLCSSISAPLVDEALWTRLDIEAALPVL 194
Query: 154 -VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ T+ +P + + + GIS TKGCY GQE V+R ++R I ++ ++ G+
Sbjct: 195 GAEQQTEHIPQALN-----LQAIGGISFTKGCYTGQETVARAKYRGINKRAMYMVKGS 247
>gi|115351883|ref|YP_773722.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
gi|115281871|gb|ABI87388.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
Length = 344
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK------ 59
L I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 37 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQ 96
Query: 60 --IEEDT----------FILEIDRSKRDSLIDKL---------------LFYKLRSNVII 92
+ +D F+L ++K D L +F L + +
Sbjct: 97 LLVSKDVQAAVQKRLSMFVLRA-KAKLTDASDTLAVVGFAGDVREALSGIFDALPDGMHV 155
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
++ G ++ +I R + D L G ++ + + ++R
Sbjct: 156 KVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDWLDVRAGEP 214
Query: 153 -IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--IT 208
I P + F+P + D++ ++ KGCY GQEVV+R Q+R I++R + +
Sbjct: 215 RITQPAVEQFVPQMVN-----FDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVA 269
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
G D +G + D G++V A +D +
Sbjct: 270 GETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|301168528|emb|CBW28118.1| putative aminomethyltransferase [Bacteriovorax marinus SJ]
Length = 510
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 30/249 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ S V G+ F Q T D+++L P + A +A + GKI +FL K +
Sbjct: 19 LSDWSVYCVKGEDREKFFQGQTTNDLMSLNPNEFAL-NARVDRTGKIQFFFLNIKTSNEL 77
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-- 122
+ L +S S I++L + + +V IE L N TF + D +F
Sbjct: 78 Y-LAFPKSIAQSAIEELDKFIIMDDVEIE-------ALDKNLYFTFLTTEASDNKFEGML 129
Query: 123 ----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
A + +++I+++ Y L + +G D + + L DL GI
Sbjct: 130 YGVPATLSFEEIDKESKEISNEEIEY--LCVENGWPRWGVDITAGDLINNTRLNDL--GI 185
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S TKGC++GQE V++I++ P +T PS +EIG + K
Sbjct: 186 SYTKGCFLGQETVAKIENGRGASFYPSFLT-----SPS-----VQKLEIGVFKINDRKGG 235
Query: 239 LAIARIDKV 247
I++I V
Sbjct: 236 EVISKIGNV 244
>gi|170692440|ref|ZP_02883603.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M]
gi|170142870|gb|EDT11035.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M]
Length = 358
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R
Sbjct: 227 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTS 278
Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ + G D +G + D G+VV A AR VD
Sbjct: 279 LANVAGELDTVKAGVELFHSDDPGQPCGMVVNA---ASARDGGVD 320
>gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 360
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ N+ + M++ G+ D P +G P+L D +G LG
Sbjct: 239 GAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGSVDRPSTGDPVLADGRAVGRLG 296
Query: 232 VVV-----GKKALAIAR 243
VV G ALA+ +
Sbjct: 297 TVVDHVDLGPVALALVK 313
>gi|307545134|ref|YP_003897613.1| aminomethyltransferase [Halomonas elongata DSM 2581]
gi|307217158|emb|CBV42428.1| K06980 [Halomonas elongata DSM 2581]
Length = 360
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPIL 221
+ L GIS KGCY GQEVV+R R ++KR M + LP GS +L
Sbjct: 247 EALGGISFKKGCYTGQEVVARAHFRGQVKKRLMRAQLEGEQLPEPGSAVL 296
>gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
Length = 368
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTL 230
L + + L KGCY GQE V+R+ + +R +++ + LP +G+P+ ++G +
Sbjct: 243 LTSAVHLAKGCYRGQETVARVHNLGRPPRRLVLLHLDGLAEQLPEAGTPVQLGARDVGRV 302
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G VV L + + V ++ LTV G R
Sbjct: 303 GSVVRHHELGVVALALVKQSVAMDAELTVAGARA 336
>gi|119503977|ref|ZP_01626058.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2080]
gi|119459980|gb|EAW41074.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2080]
Length = 318
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 36/226 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ ++ +++ G+ A FLQ TAD + A +G+++ F ++ +T
Sbjct: 22 LAQEALLRLEGQDACKFLQGQTTADFGQVNALDVIPGAFCDVKGRVIADFRALIVDPETV 81
Query: 66 ILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
IL + S D L L+F K N E P GV S H F +D++ +
Sbjct: 82 ILCVMESLADLLSGHLTKYLMFSKAELNRTPE--PPWGVAGS-EAHHHFD----VDQKLT 134
Query: 122 IAD--VLLHRTW----GHNEK--IASDIKTYHELRINHGIVDPN---------------- 157
+ + W GH I D K + +N+ +D
Sbjct: 135 EGNRAAAVAAGWLIPLGHQTSLLIPEDAKQVG-INLNNKSIDEFESAWRALACLRGEARI 193
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
T P D DL +S KGCY GQE+++R+ R ++R
Sbjct: 194 TSSTTGKYLPQDLSYDLAGWVSFDKGCYTGQEIIARLHWRGTPKRR 239
>gi|148359116|ref|YP_001250323.1| aminomethyltransferase-like glycine cleavage T protein [Legionella
pneumophila str. Corby]
gi|148280889|gb|ABQ54977.1| aminomethyltransferase-like glycine cleavage T protein [Legionella
pneumophila str. Corby]
Length = 329
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 196 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 250
Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230
++ + +D+ SG + +DIE+G L
Sbjct: 251 TLKHELKKFVIQSDNQLYSGQKLFKSDEDIEVGEL 285
>gi|152995116|ref|YP_001339951.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
sp. MWYL1]
gi|150836040|gb|ABR70016.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
sp. MWYL1]
Length = 309
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
TI P M GIS TKGCY GQE+V+R+Q++ +K+ + T +L +
Sbjct: 197 TILPQWLNMQSTGGISFTKGCYTGQEIVARMQYKGKSKKQLTLATWQGNLDAT 249
>gi|307729686|ref|YP_003906910.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003]
gi|307584221|gb|ADN57619.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003]
Length = 374
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E RI +V+ F+P + D+L ++ KGCY GQEVV+R Q+R I++R
Sbjct: 243 EPRITQPVVE---QFVPQMVN-----FDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTS 294
Query: 206 I--ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ + G D +G + D G+VV A AR VD
Sbjct: 295 LANVAGELDTVKAGVELFHSDDPGQPCGMVVNA---ASARDGGVD 336
>gi|254805066|ref|YP_003083287.1| hypothetical protein NMO_1104 [Neisseria meningitidis alpha14]
gi|254668608|emb|CBA06179.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
Length = 288
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 98/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123
++ + +L + LR+ + EI V QE + + ++ +
Sbjct: 71 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 130
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T A+ +
Sbjct: 131 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 240
>gi|86159270|ref|YP_466055.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775781|gb|ABC82618.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
Length = 304
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 32/246 (13%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++F++V GK A +L + T D+ L A +A L +G +L + + E ++
Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGEAAYAAFLNAKGHLLGEGHV-LVREGEILV 79
Query: 68 EIDRS---KRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-D 117
E+D + + +L++KL+ F L + + P+ G + +
Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDL--SATLRALPVLGPEGPARLAGRAGAAPVVPS 137
Query: 118 ERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPSTIFP 167
R V + G E + + D+ LRI G+ D + ++ P
Sbjct: 138 ARRGAPCVDVWAPAGEAEALRAALVADGAAPLDLAELESLRILAGVARFGAD-MDASRLP 196
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS---GSPILTDD 224
+A + IS TKGCYIGQEVV R R +++ + + +LPP G+P++
Sbjct: 197 MEAGLTR-AAISFTKGCYIGQEVVLRATARGHLQRGLVQL----ELPPGAGPGTPLVAGG 251
Query: 225 IEIGTL 230
E+G +
Sbjct: 252 QEVGAV 257
>gi|319786898|ref|YP_004146373.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1]
gi|317465410|gb|ADV27142.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1]
Length = 267
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P ++ L S++KGCY GQE+V+R +++ ++ D + P GS ++ D+
Sbjct: 163 PQQLGLERLQAYSVSKGCYPGQEIVARTHFLGKAKRQLALLQVADAVAP-GSEVVQDERA 221
Query: 227 IGTLGVVVGKK---ALAI 241
+GT+ V GK ALA+
Sbjct: 222 MGTVVAVAGKAPRWALAV 239
>gi|291303154|ref|YP_003514432.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
gi|290572374|gb|ADD45339.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
Length = 344
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+DE + + L TW Y LRI G+ D TI PH+ + L+
Sbjct: 201 LDETIAALGLPLAGTW-----------AYDTLRIPQGLPAFGVDTDHRTI-PHEVVSLLV 248
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPS-GSPILTDDIEIGTLGV 232
+ L KGCY GQE V+R+ + + I + GT++ PP G ++ D +G +G
Sbjct: 249 TAVHLDKGCYRGQETVARVHNLGKPPRATSILHLDGTEEQPPKPGDEVMLDGRAVGRVGT 308
Query: 233 VV-----GKKALAIARIDKVDHAIKKGM 255
G ALA+ R + D K M
Sbjct: 309 AGRHYEDGMIALALLRRNVRDKTDAKLM 336
>gi|45185401|ref|NP_983118.1| ABR170Wp [Ashbya gossypii ATCC 10895]
gi|74695271|sp|Q75D53|CAF17_ASHGO RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|44981090|gb|AAS50942.1| ABR170Wp [Ashbya gossypii ATCC 10895]
Length = 462
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204
R+ G+++ ++ + P + DL + +S KGCY+GQE+ +R ++RKR P
Sbjct: 293 RLRRGVLEGVSELRSEAVLPLEVNFDLYEDAVSFDKGCYVGQELTARTHATGVLRKRCAP 352
Query: 205 MIITGTDDL 213
+I++ + L
Sbjct: 353 VIVSNSASL 361
>gi|331664472|ref|ZP_08365378.1| tRNA-modifying protein YgfZ [Escherichia coli TA143]
gi|331058403|gb|EGI30384.1| tRNA-modifying protein YgfZ [Escherichia coli TA143]
Length = 326
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|300995669|ref|ZP_07181197.1| folate-binding protein YgfZ [Escherichia coli MS 200-1]
gi|300304777|gb|EFJ59297.1| folate-binding protein YgfZ [Escherichia coli MS 200-1]
gi|324005551|gb|EGB74770.1| folate-binding protein YgfZ [Escherichia coli MS 57-2]
gi|324011751|gb|EGB80970.1| folate-binding protein YgfZ [Escherichia coli MS 60-1]
Length = 305
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 246
>gi|261253910|ref|ZP_05946483.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891]
gi|260937301|gb|EEX93290.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891]
Length = 322
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 137 IASDIKTYHELRINHGIVDP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+A D+ T H+++ +++ + +P I + ++GIS KGCY GQE V+R
Sbjct: 177 VAEDLWTLHDIQSGTPLLNAEQQNEHIPQAIN-----VQAVDGISFKKGCYTGQETVARA 231
Query: 195 QHRNIIRKRPMIITGTDD 212
++R + ++ I+ G+ D
Sbjct: 232 KYRGMNKRALFIVQGSAD 249
>gi|289804664|ref|ZP_06535293.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 281
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 133 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 190
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 191 ARAKFRGANKRALWLLAG----KASRVPEAGEDLEL 222
>gi|170720249|ref|YP_001747937.1| hypothetical protein PputW619_1063 [Pseudomonas putida W619]
gi|169758252|gb|ACA71568.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 313
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGT 210
++ P + F+P I + L+G+S KGCY GQE+V+R+Q+ +++R ++
Sbjct: 184 VMGPTRELFIPQMIN-----LQALDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLLLDQ 238
Query: 211 DDLPPSGSPILT 222
D+P G+ I +
Sbjct: 239 QDIPAPGAQIFS 250
>gi|304396719|ref|ZP_07378599.1| folate-binding protein YgfZ [Pantoea sp. aB]
gi|304355515|gb|EFM19882.1| folate-binding protein YgfZ [Pantoea sp. aB]
Length = 328
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 139 SDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+D + + L I GI +DP T P + L+ IS KGCY GQE+V+R ++
Sbjct: 184 NDSQQWLALDIEAGIPVIDPATSV---QFIPQATNLQALDAISFKKGCYAGQEMVARAKY 240
Query: 197 RNIIRKRPMIITG-TDDLPPSGSPI 220
R ++ + G LP + +P+
Sbjct: 241 RGANKRALYWLAGQASHLPEANAPL 265
>gi|167836301|ref|ZP_02463184.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia thailandensis MSMB43]
Length = 160
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E RI V+ F+P + D++ G++ KGCY GQEVV+R Q+R I++R
Sbjct: 29 EPRITQPAVE---QFVPQMVN-----FDVIGGVNFRKGCYPGQEVVARSQYRGTIKRR 78
>gi|330877446|gb|EGH11595.1| hypothetical protein PSYMP_17900 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 293
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +D++P G+ + +
Sbjct: 211 LYRLTLLSDEIPAPGTALFS 230
>gi|332087725|gb|EGI92852.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 155-74]
Length = 305
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 246
>gi|213162057|ref|ZP_03347767.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 254
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 106 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 163
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 164 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 195
>gi|204928215|ref|ZP_03219415.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322537|gb|EDZ07734.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 326
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L + + + G + ++Q +TADV + + +A +GK+ + + E D
Sbjct: 22 IALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR-ERD 80
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------------------- 102
F RS ++ + +L Y + S V+I P + VL
Sbjct: 81 GFAWIERRSVHEAQLTELKKYAVFSKVVI--APDDERVLLGVAGFQARAALANVFSELPN 138
Query: 103 SWNQEHTFSNSSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
S NQ S+ + ERF + A++L + H E ++ + + L I
Sbjct: 139 SENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKL--HGEAELNNSQQWLALDIEA 196
Query: 152 GIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI P D S F P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 197 GI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DDLPPSGSPILTDDIEI 227
S P +D+E+
Sbjct: 255 ----ASRVPEAGEDLEL 267
>gi|325130373|gb|EGC53139.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
OX99.30304]
Length = 287
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 98/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDERFSIA 123
++ + +L + LR+ + EI V QE + + ++ +
Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPSLAFTAECGSDGICS 129
Query: 124 DVLLHRTWGH---------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
VL HR H + A + HE+R + + T A+ +
Sbjct: 130 VVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 181
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239
>gi|27364925|ref|NP_760453.1| putative aminomethyltransferase [Vibrio vulnificus CMCP6]
gi|81448625|sp|Q8DC85|YGFZ_VIBVU RecName: Full=tRNA-modifying protein ygfZ
gi|27361071|gb|AAO09980.1| Predicted aminomethyltransferase [Vibrio vulnificus CMCP6]
Length = 324
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLETDQVTWGGHCDAKGKLWSVFRLFHYADGYA 85
Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110
+L+ D+S D + +L +F K+ NV + +Q + L+ N E TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVD--PN-TDFLPS 163
+ + + + S LL +++ + + T H L + I++ P F +
Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPAFAQN 202
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + +NGIS KGCY GQE V+R ++R I ++ ++GT
Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGT 249
>gi|261856409|ref|YP_003263692.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2]
gi|261836878|gb|ACX96645.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2]
Length = 344
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 99/258 (38%), Gaps = 66/258 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-- 63
L ++ + V G+ A FLQA++T ++L L A A+ +G+I LI +
Sbjct: 29 LDTRTSLLVSGEEAGEFLQAMLTQEILLLDGTHAARGALCNAKGRISTTVLIHPLRPQGR 88
Query: 64 --------TFILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQP--------- 96
T+ L + L+ L Y LR V+I + P
Sbjct: 89 EQGSEQSMTYRLTVPSELAADLLKTLKLYVLRRRVVINGNDDWQNIGVLNPDPAFLADLG 148
Query: 97 --------------INGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIAS 139
+GV+++W EH D R S+ VLL T + +
Sbjct: 149 IAASASDPLAQSTLPSGVIVTW--EHMGD-----DARLSLQGPTSVLL--TLAPHLPQRT 199
Query: 140 DIKTYHELRINHGIVDPNTD----FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ IN GI + F+P + +D LN +S KGCY GQEVV+R+
Sbjct: 200 SNSAWQCAEINDGIPTITQETALHFVPQWLN-----LDQLNAVSFKKGCYPGQEVVARLH 254
Query: 196 HRNIIRKRPMIITGTDDL 213
+ +R +I G+ L
Sbjct: 255 YLGKSNRR--MIKGSTRL 270
>gi|293412257|ref|ZP_06654980.1| tRNA-modifying protein ygfZ [Escherichia coli B354]
gi|291469028|gb|EFF11519.1| tRNA-modifying protein ygfZ [Escherichia coli B354]
Length = 326
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|62391419|ref|YP_226821.1| aminomethyltransferase, GCVT-like protein [Corynebacterium
glutamicum ATCC 13032]
gi|21325353|dbj|BAB99974.1| Predicted aminomethyltransferase related to GcvT [Corynebacterium
glutamicum ATCC 13032]
gi|41326760|emb|CAF21242.1| PUTATIVE AMINOMETHYLTRANSFERASE, GCVT HOMOLOG [Corynebacterium
glutamicum ATCC 13032]
Length = 367
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 68 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 126
Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117
L+ ++ D+LI K++F+ S V ++ + ++ QE ++ F +D
Sbjct: 127 LDTSAAEFDTLIGFLTKMIFW---SEVTVQEADL-AIITLLGQEIALPDAVFARRVDWNG 182
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169
R +A + G ++ + + K Y R+ D TI PH+
Sbjct: 183 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 241
Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220
+ L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I
Sbjct: 242 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 298
Query: 221 LTDDIEIGTLGVVV 234
+G LG VV
Sbjct: 299 KAGARTVGRLGTVV 312
>gi|212710031|ref|ZP_03318159.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM
30120]
gi|212687238|gb|EEB46766.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM
30120]
Length = 328
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 97/262 (37%), Gaps = 74/262 (28%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-----LLYFLIS 58
+ L N I + G A +LQ +TAD+ TL + +A P+GK+ L + L
Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADISTLEHAHTL-TAHCDPKGKMWSDLRLFHHL-- 79
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------------- 96
D F RS D+ + +L Y + S V E +P
Sbjct: 80 ----DGFSYIERRSVADAQLAELKKYAVFSKVTFEKKPELKLLGIAGQGAREALAAIFAT 135
Query: 97 ----INGVVLSWNQEHTFSNSSFIDERF----------SIADVLLHRTWGHNEKIASDIK 142
N VV+ N T + ERF I D L N SD +
Sbjct: 136 LPDHQNQVVVDGNS--TLLHFDLPAERFLIITDEPIAQKITDTL-------NAPQVSD-Q 185
Query: 143 TYHELRINHGIV----DPNTDFLPST----IFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ L I G+ + + LP + PH GIS KGCY GQE+V+R
Sbjct: 186 QWLALDIEAGLAVIDQENSAQHLPQAANLQVIPH--------GISFKKGCYTGQEMVARA 237
Query: 195 QHRNIIRKRPMIITGTDDLPPS 216
+ R ++ +TGT P+
Sbjct: 238 KFRGANKRAMYWLTGTGSALPT 259
>gi|19553777|ref|NP_601779.1| aminomethyltransferase related to GcvT [Corynebacterium glutamicum
ATCC 13032]
Length = 373
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVD-GVFY 132
Query: 67 LEIDRSKRDSLID---KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---ID--- 117
L+ ++ D+LI K++F+ S V ++ + ++ QE ++ F +D
Sbjct: 133 LDTSAAEFDTLIGFLTKMIFW---SEVTVQEADL-AIITLLGQEIALPDAVFARRVDWNG 188
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD-- 169
R +A + G ++ + + K Y R+ D TI PH+
Sbjct: 189 PSRIDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDLDDKTI-PHEIP 247
Query: 170 ---ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPP-SGSPI 220
+ L + LTKGCY GQE V+R+ + + + P ++ G+ L P +G+ I
Sbjct: 248 HWIGRGEHLGAVHLTKGCYRGQETVARVDN---LGRSPRVLVLLHLDGSAPLDPVTGAEI 304
Query: 221 LTDDIEIGTLGVVV 234
+G LG VV
Sbjct: 305 KAGARTVGRLGTVV 318
>gi|213419535|ref|ZP_03352601.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 228
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 80 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 137
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 138 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 169
>gi|300921231|ref|ZP_07137604.1| folate-binding protein YgfZ [Escherichia coli MS 115-1]
gi|300411837|gb|EFJ95147.1| folate-binding protein YgfZ [Escherichia coli MS 115-1]
Length = 305
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPI 220
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAGEDL 244
>gi|330828471|ref|YP_004391423.1| aminomethyltransferase [Aeromonas veronii B565]
gi|328803607|gb|AEB48806.1| aminomethyltransferase [Aeromonas veronii B565]
Length = 302
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
+ L+GIS KGCY+GQE V+R ++R + ++ GT +G P+ + D
Sbjct: 192 LQALDGISFNKGCYMGQETVARAKYRGANNRALFLLAGT-----TGEPVASGD 239
>gi|218244955|ref|YP_002370326.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|257057980|ref|YP_003135868.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
gi|218165433|gb|ACK64170.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|256588146|gb|ACU99032.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
Length = 356
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P+ + I L IS KGCYIGQE ++R+ ++
Sbjct: 220 RVWEQLRIKQGRPFPDKELTEDYIALEAGLWQ---AISFDKGCYIGQETIARLNTYKGVK 276
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R + T + P G+P++ D +IG L
Sbjct: 277 QRLWGVKLTQLVDP-GTPVILDGNKIGIL 304
>gi|226226002|ref|YP_002760108.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27]
gi|226089193|dbj|BAH37638.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27]
Length = 357
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
P +A +D L+ IS TKGCY GQE V+R+ R + +
Sbjct: 236 IPQEANLDTLDAISFTKGCYTGQETVARVHFRGHVNR 272
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ ++ G A L ++T DV L ++ +A LTP+GK++ I + +EDTF++ +D
Sbjct: 52 WTRIQGPKAADALNGLVTNDVTLLAVNASQYAAALTPKGKMVADMTIVRADEDTFLVGVD 111
>gi|170683930|ref|YP_001745051.1| putative global regulator [Escherichia coli SMS-3-5]
gi|226730799|sp|B1LD99|YGFZ_ECOSM RecName: Full=tRNA-modifying protein ygfZ
gi|170521648|gb|ACB19826.1| tRNA-modifying protein ygfZ [Escherichia coli SMS-3-5]
Length = 326
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|194431674|ref|ZP_03063965.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012]
gi|194420030|gb|EDX36108.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012]
gi|320182198|gb|EFW57101.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella boydii ATCC 9905]
gi|332086823|gb|EGI91959.1| tRNA-modifying protein ygfZ [Shigella boydii 5216-82]
Length = 326
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|198242202|ref|YP_002217026.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226730803|sp|B5FUG1|YGFZ_SALDC RecName: Full=tRNA-modifying protein ygfZ
gi|197936718|gb|ACH74051.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326624794|gb|EGE31139.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 326
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267
>gi|308446327|ref|XP_003087152.1| hypothetical protein CRE_18393 [Caenorhabditis remanei]
gi|308260738|gb|EFP04691.1| hypothetical protein CRE_18393 [Caenorhabditis remanei]
Length = 240
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 29/249 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + I G AI FLQ +T +V L I + +AI +G+I + KI
Sbjct: 1 MSDLAFSSFTLI---GVDAIKFLQGQVTVNVEALAENITQYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + + + + + Y S + +E G V N S D F
Sbjct: 58 NPEHLEIVTTQDQAEEFAKHIKKYGAFSKMKLEE---TGRVFP------TLNGSTTD--F 106
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
S + +DI + I G N + P + + GI+
Sbjct: 107 STTE--------------TDISVWQIAAIQTGQAYIN-QAIEHVFQPQELRLHQREGINY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV++R+ + + +I GT P + + + G AL
Sbjct: 152 DKGCYLGQEVIARLWFKAKPKAWLHVIQGTGPAPAQAEQLNKGVQVVNSATFENGYIALV 211
Query: 241 IARIDKVDH 249
+AR D ++
Sbjct: 212 VARPDALEE 220
>gi|327395068|dbj|BAK12490.1| protein YgfZ [Pantoea ananatis AJ13355]
Length = 337
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + L I GI P D S F P A M L+ IS KGCY GQE+V+R ++R
Sbjct: 193 NDSTQWLALDIEAGI--PVIDAATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYR 250
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ ++G S P D +E+
Sbjct: 251 GANKRALYWLSGQ----ASHLPAANDSLEL 276
>gi|15803434|ref|NP_289467.1| putative global regulator [Escherichia coli O157:H7 EDL933]
gi|15833024|ref|NP_311797.1| global regulator [Escherichia coli O157:H7 str. Sakai]
gi|168747622|ref|ZP_02772644.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113]
gi|168753837|ref|ZP_02778844.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401]
gi|168760027|ref|ZP_02785034.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501]
gi|168766892|ref|ZP_02791899.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486]
gi|168775776|ref|ZP_02800783.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196]
gi|168778912|ref|ZP_02803919.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076]
gi|168785745|ref|ZP_02810752.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869]
gi|168800032|ref|ZP_02825039.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508]
gi|195936517|ref|ZP_03081899.1| putative global regulator [Escherichia coli O157:H7 str. EC4024]
gi|208807633|ref|ZP_03249970.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206]
gi|208812486|ref|ZP_03253815.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045]
gi|208818514|ref|ZP_03258834.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042]
gi|209400648|ref|YP_002272373.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115]
gi|217326988|ref|ZP_03443071.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588]
gi|254794848|ref|YP_003079685.1| putative global regulator [Escherichia coli O157:H7 str. TW14359]
gi|261226211|ref|ZP_05940492.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256534|ref|ZP_05949067.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. FRIK966]
gi|81765981|sp|Q8XD41|YGFZ_ECO57 RecName: Full=tRNA-modifying protein ygfZ
gi|226730793|sp|B5YQ91|YGFZ_ECO5E RecName: Full=tRNA-modifying protein ygfZ
gi|12517426|gb|AAG58026.1|AE005520_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363242|dbj|BAB37193.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187768764|gb|EDU32608.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196]
gi|188017872|gb|EDU55994.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113]
gi|189003387|gb|EDU72373.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076]
gi|189358685|gb|EDU77104.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401]
gi|189363755|gb|EDU82174.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486]
gi|189369226|gb|EDU87642.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501]
gi|189373870|gb|EDU92286.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869]
gi|189377696|gb|EDU96112.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508]
gi|208727434|gb|EDZ77035.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206]
gi|208733763|gb|EDZ82450.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045]
gi|208738637|gb|EDZ86319.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042]
gi|209162048|gb|ACI39481.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115]
gi|209760538|gb|ACI78581.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760540|gb|ACI78582.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760542|gb|ACI78583.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760546|gb|ACI78585.1| hypothetical protein ECs3770 [Escherichia coli]
gi|217319355|gb|EEC27780.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588]
gi|254594248|gb|ACT73609.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. TW14359]
gi|320189243|gb|EFW63902.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. EC1212]
gi|320640542|gb|EFX10081.1| putative global regulator [Escherichia coli O157:H7 str. G5101]
gi|320645789|gb|EFX14774.1| putative global regulator [Escherichia coli O157:H- str. 493-89]
gi|320651089|gb|EFX19529.1| putative global regulator [Escherichia coli O157:H- str. H 2687]
gi|320667179|gb|EFX34142.1| putative global regulator [Escherichia coli O157:H7 str. LSU-61]
gi|326339017|gb|EGD62832.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. 1044]
gi|326343101|gb|EGD66869.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. 1125]
Length = 326
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|322831502|ref|YP_004211529.1| folate-binding protein YgfZ [Rahnella sp. Y9602]
gi|321166703|gb|ADW72402.1| folate-binding protein YgfZ [Rahnella sp. Y9602]
Length = 330
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D + F P + L+GIS TKGCY GQE+V+R ++R
Sbjct: 185 NDSQQWLALDIEAGF--PVIDTANAVQFIPQATNIHALDGISFTKGCYAGQEMVARAKYR 242
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + G S P DD+E+
Sbjct: 243 GANKRALYWLAGK----ASKVPAPADDLEL 268
>gi|291284217|ref|YP_003501035.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615]
gi|209760544|gb|ACI78584.1| hypothetical protein ECs3770 [Escherichia coli]
gi|290764090|gb|ADD58051.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615]
gi|320656585|gb|EFX24481.1| putative global regulator [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662104|gb|EFX29505.1| putative global regulator [Escherichia coli O55:H7 str. USDA 5905]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|16766349|ref|NP_461964.1| global regulator [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994112|ref|ZP_02575204.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168261789|ref|ZP_02683762.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|197263849|ref|ZP_03163923.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|81521741|sp|Q8ZM80|YGFZ_SALTY RecName: Full=tRNA-modifying protein ygfZ
gi|16421599|gb|AAL21923.1| putative aminomethyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|197242104|gb|EDY24724.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205328009|gb|EDZ14773.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205349199|gb|EDZ35830.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261248180|emb|CBG26016.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995203|gb|ACY90088.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159604|emb|CBW19123.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914070|dbj|BAJ38044.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225722|gb|EFX50776.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323131404|gb|ADX18834.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332989915|gb|AEF08898.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
H E ++ + + L I GI P D S F P + L GIS KGCY GQE+V
Sbjct: 178 HGEAELNNSQQWLALDIEAGI--PVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++ G S P +D+E+
Sbjct: 236 ARAKFRGANKRALWLLAGK----ASRVPEAGEDLEL 267
>gi|110643047|ref|YP_670777.1| putative global regulator [Escherichia coli 536]
gi|191173236|ref|ZP_03034767.1| tRNA-modifying protein ygfZ [Escherichia coli F11]
gi|118577993|sp|Q0TDV3|YGFZ_ECOL5 RecName: Full=tRNA-modifying protein ygfZ
gi|110344639|gb|ABG70876.1| hypothetical protein ECP_2892 [Escherichia coli 536]
gi|190906487|gb|EDV66095.1| tRNA-modifying protein ygfZ [Escherichia coli F11]
gi|281179903|dbj|BAI56233.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|331684524|ref|ZP_08385116.1| tRNA-modifying protein YgfZ [Escherichia coli H299]
gi|331078139|gb|EGI49345.1| tRNA-modifying protein YgfZ [Escherichia coli H299]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|331654396|ref|ZP_08355396.1| tRNA-modifying protein YgfZ [Escherichia coli M718]
gi|331047778|gb|EGI19855.1| tRNA-modifying protein YgfZ [Escherichia coli M718]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|330817243|ref|YP_004360948.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
gi|327369636|gb|AEA60992.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
Length = 346
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 39/235 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I V G A FL + +T D+ L + + T +G++L FL + E
Sbjct: 40 LSQFGIIDVAGDDAATFLHSQLTNDIEHLDAAGVKLAGYCTAKGRLLASFLAWRSESGVR 99
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSN--SSFIDE---- 118
+L + + + ++ +L + LR+ + + + V ++ S + D
Sbjct: 100 LL-VSKDIQPAVQKRLSMFVLRAKAKLSDAAGLVAVGIAGEAREALSGLFEALPDGVHTK 158
Query: 119 ---------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINHG-I 153
R AD W G +++ + + E+R I
Sbjct: 159 LDGPAGTLIRLPDADGRARYLWIASREQFEAGAAVLDGKLARVSPAVWDWLEIRAAEPRI 218
Query: 154 VDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
P + F+P + D++ ++ KGCY GQE+V+R Q+R I++R ++
Sbjct: 219 TQPVVEQFVPQMLN-----YDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRAALV 268
>gi|293416151|ref|ZP_06658791.1| global regulator [Escherichia coli B185]
gi|284922846|emb|CBG35935.1| tRNA-modifying protein [Escherichia coli 042]
gi|291432340|gb|EFF05322.1| global regulator [Escherichia coli B185]
Length = 326
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|157377080|ref|YP_001475680.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
gi|157319454|gb|ABV38552.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
Length = 321
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 37/232 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + + G+ F+ +T D+ +L A P+GK+ F IE+ F
Sbjct: 24 LTHLGLMSITGEQGRSFIHGQVTTDISSLEKDQWCWGAHCDPKGKMWASFRTFAIEDTLF 83
Query: 66 I------LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ LE+D + L +F K + I GV QE + N+ F D
Sbjct: 84 MMMPSDTLEVDLPQ---LAKYAVFSKAELTNVSSDWLILGVAGEQAQE--WVNNYFGDID 138
Query: 120 FSIADV----LLHRTWGHN-----EKIAS------------DIKTYHELRINHGIVDPNT 158
++ ++ LL G EK S + K + L I G PN
Sbjct: 139 KAVTEIPGGALLKD--GSRFIIVIEKTPSQALLTSINAPIYECKVWQALEIQSGY--PNL 194
Query: 159 DFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
F P + + GIS KGCY+GQE V+R+++R ++ I++G
Sbjct: 195 AAAHQGHFVPQMCNLQAIGGISFEKGCYMGQETVARMKYRGGNKRALYILSG 246
>gi|292654574|ref|YP_003534471.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
gi|291372801|gb|ADE05028.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
Length = 365
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
N + KGC++GQE+VS+I++R +R ++ D LP SG+ + D +GT+ V
Sbjct: 250 NALDFDKGCFVGQELVSKIENRGRPSRR-LVGFRADALPDSGAEVSADGESVGTVTRAVE 308
Query: 236 KKAL-AIARIDKVDHAIK-KGMALTVHGVRVKAS 267
L A VD+ + + + V G RV+A+
Sbjct: 309 SPMLDAPIGFALVDYGLDTDALKVAVDGDRVEAT 342
>gi|220918129|ref|YP_002493433.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955983|gb|ACL66367.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
Length = 304
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D+ LRI G+ D + ++ P +A + IS TKGCYIGQEVV R R
Sbjct: 170 DLAELESLRILAGVARFGAD-MDASRLPMEAGLTR-AAISFTKGCYIGQEVVLRATARGH 227
Query: 200 IRKRPMIITGTDDLPPS---GSPILTDDIEIGTL 230
+++ + + +LPP G+P++ E+G +
Sbjct: 228 LQRGLVQL----ELPPGARPGTPLVAGGQEVGAV 257
>gi|327484963|gb|AEA79370.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Vibrio cholerae LMA3894-4]
Length = 323
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|308188001|ref|YP_003932132.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1]
gi|308058511|gb|ADO10683.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1]
Length = 328
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 139 SDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+D + + L I GI +DP T P + L+ IS KGCY GQE+V+R ++
Sbjct: 184 NDSQQWLALDIEAGIPVIDPATSV---QFIPQATNLQALDAISFKKGCYAGQEMVARAKY 240
Query: 197 RNIIRKRPMIITG-TDDLPPSGSPI 220
R ++ + G LP + +P+
Sbjct: 241 RGANKRALYWLVGQASHLPEANAPL 265
>gi|225024513|ref|ZP_03713705.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC
23834]
gi|224942664|gb|EEG23873.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC
23834]
Length = 285
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 25/233 (10%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A FL + ++ +L L A + +P+G++L L+ + D F+L +
Sbjct: 14 EVSGADAAEFLHSQLSNHILDLQPGEACFATYNSPRGRVLANMLVLR-RADRFLLVMAAD 72
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---RFSIAD----V 125
++ I +L + LRS + +W + +D +F+ + +
Sbjct: 73 LLEATIKRLRMFVLRSKTVFHTDS------AWQVYGQSGADTGVDAAALKFAAEEGDNGL 126
Query: 126 LLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM---DLL 175
++ G N + S D E I+ T+ A M LL
Sbjct: 127 IMLVLAGGNRMVLSPAPLPDADYPAAAEAWQAAEILQGRPWISQPTMESSVAQMLNQHLL 186
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
G+ KGCY GQE+++R Q+R +R R M + + GS + D E+G
Sbjct: 187 GGVHFKKGCYPGQEIIARAQYRGQVR-RGMAVCRSAMPVAVGSKVEADGEEVG 238
>gi|121729911|ref|ZP_01682336.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675445|ref|YP_001217973.1| hypothetical protein VC0395_A2049 [Vibrio cholerae O395]
gi|262167302|ref|ZP_06035012.1| glycine cleavage T-protein [Vibrio cholerae RC27]
gi|172047576|sp|A5F5F3|YGFZ_VIBC3 RecName: Full=tRNA-modifying protein ygfZ
gi|121628354|gb|EAX60858.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146317328|gb|ABQ21867.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014364|gb|ACP10574.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262024277|gb|EEY42968.1| glycine cleavage T-protein [Vibrio cholerae RC27]
Length = 323
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|262190699|ref|ZP_06048930.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93]
gi|262033411|gb|EEY51918.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93]
Length = 323
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|229507469|ref|ZP_04396974.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
BX 330286]
gi|229512336|ref|ZP_04401815.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
B33]
gi|229519472|ref|ZP_04408915.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
RC9]
gi|229606974|ref|YP_002877622.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae
MJ-1236]
gi|229344161|gb|EEO09136.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
RC9]
gi|229352301|gb|EEO17242.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
B33]
gi|229354974|gb|EEO19895.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
BX 330286]
gi|229369629|gb|ACQ60052.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae
MJ-1236]
Length = 339
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269
>gi|229524458|ref|ZP_04413863.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
bv. albensis VL426]
gi|229527079|ref|ZP_04416474.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
12129(1)]
gi|229335476|gb|EEO00958.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
12129(1)]
gi|229338039|gb|EEO03056.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
bv. albensis VL426]
Length = 339
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269
>gi|218706404|ref|YP_002413923.1| putative global regulator [Escherichia coli UMN026]
gi|293406397|ref|ZP_06650323.1| global regulator [Escherichia coli FVEC1412]
gi|298382133|ref|ZP_06991730.1| ygfZ [Escherichia coli FVEC1302]
gi|300896205|ref|ZP_07114754.1| folate-binding protein YgfZ [Escherichia coli MS 198-1]
gi|226730797|sp|B7N7E2|YGFZ_ECOLU RecName: Full=tRNA-modifying protein ygfZ
gi|218433501|emb|CAR14404.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli UMN026]
gi|291426403|gb|EFE99435.1| global regulator [Escherichia coli FVEC1412]
gi|298277273|gb|EFI18789.1| ygfZ [Escherichia coli FVEC1302]
gi|300359939|gb|EFJ75809.1| folate-binding protein YgfZ [Escherichia coli MS 198-1]
Length = 326
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|323491208|ref|ZP_08096394.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG
20546]
gi|323314576|gb|EGA67654.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG
20546]
Length = 322
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG--TDDLPPSGS 218
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G D+P +
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRALFIVKGEAQQDIPANAE 257
>gi|229514097|ref|ZP_04403559.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TMA 21]
gi|229349278|gb|EEO14235.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TMA 21]
Length = 339
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 220 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269
>gi|153214509|ref|ZP_01949418.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153826896|ref|ZP_01979563.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|254291672|ref|ZP_04962460.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|124115311|gb|EAY34131.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|149739259|gb|EDM53521.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150422444|gb|EDN14403.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 323
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|170018856|ref|YP_001723810.1| putative global regulator [Escherichia coli ATCC 8739]
gi|189041183|sp|B1ITA4|YGFZ_ECOLC RecName: Full=tRNA-modifying protein ygfZ
gi|169753784|gb|ACA76483.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
Length = 326
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++TG+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAG-----EDLEL 267
>gi|297581095|ref|ZP_06943020.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297534921|gb|EFH73757.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 323
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|329119401|ref|ZP_08248087.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464546|gb|EGF10845.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 287
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 38/245 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ I+ G FL ++ + L A + TP+G+++ +++ + +L +
Sbjct: 10 AVIRATGDDRASFLHGQLSNHIEALAEGEACYATYNTPKGRVIANMIVANTGGE-LLLVL 68
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-----SWNQEHTFSNSSFIDERFSIAD 124
++++ +L + LR+ V EI +G + Q SF F ++D
Sbjct: 69 ASDLAEAVVKRLRMFVLRAKVSFEILENHGAAGRLPDGTVPQPAAEPQLSF---PFHLSD 125
Query: 125 VLLHRTWGH--------------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
L+ H ++ A + HE+R + + T
Sbjct: 126 GLIEIPLPHGGMFLTGETAVLPAHDAAAENAWKLHEIRSGYPWICAATK--------ESC 177
Query: 171 LMDLLN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
+ +LN G+ KGCY GQE+++R Q+R +++ ++ G +G+ +L D
Sbjct: 178 VAQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLFGGS--VEAGAAVLQDLT 235
Query: 226 EIGTL 230
E GT+
Sbjct: 236 EAGTV 240
>gi|15642468|ref|NP_232101.1| hypothetical protein VC2472 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590986|ref|ZP_01678305.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|227082593|ref|YP_002811144.1| hypothetical protein VCM66_2395 [Vibrio cholerae M66-2]
gi|254849597|ref|ZP_05238947.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10]
gi|255746858|ref|ZP_05420803.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera
CIRS 101]
gi|262162023|ref|ZP_06031039.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1]
gi|298500172|ref|ZP_07009977.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|81544421|sp|Q9KPA1|YGFZ_VIBCH RecName: Full=tRNA-modifying protein ygfZ
gi|254814152|sp|C3LR15|YGFZ_VIBCM RecName: Full=tRNA-modifying protein ygfZ
gi|9657051|gb|AAF95614.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547163|gb|EAX57292.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|227010481|gb|ACP06693.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|254845302|gb|EET23716.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10]
gi|255735260|gb|EET90660.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera
CIRS 101]
gi|262028272|gb|EEY46929.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1]
gi|297540865|gb|EFH76919.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 323
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|183179722|ref|ZP_02957933.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013133|gb|EDT88433.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 323
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|330898494|gb|EGH29913.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 315
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +++P G+ + +
Sbjct: 233 LYRLTLSNEEIPQPGTALFS 252
>gi|302188267|ref|ZP_07264940.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae 642]
Length = 293
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +++P G+ + +
Sbjct: 211 LYRLTLSGEEIPQPGTAVFS 230
>gi|325128313|gb|EGC51197.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568]
Length = 287
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124
++ + +L + LR+ + EI G L + E + N +F ++ S I
Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 129
Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ L T + A + HE+R + + T A+ +
Sbjct: 130 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 181
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 239
>gi|330973020|gb|EGH73086.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 293
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 119 RFSIADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNT--DFLPSTIFPHDALMDLL 175
R + AD + R H NE +D ++R+ G V +T +F+P I + +
Sbjct: 129 RSAEADSIKSRLASHLNEAPLNDW-LLGQIRVGIGQVFGSTREEFIPQMIN-----LQAV 182
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT 222
G+S KGCY GQE+V+R+Q+ +++R +T +++P G+ + +
Sbjct: 183 GGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFS 230
>gi|271962471|ref|YP_003336667.1| LigA [Streptosporangium roseum DSM 43021]
gi|270505646|gb|ACZ83924.1| LigA [Streptosporangium roseum DSM 43021]
Length = 328
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLG 231
+ L+KGCY GQE V+R+ + +R + + D LP G+P++ D++E+G +G
Sbjct: 214 LHLSKGCYKGQETVARVHNLGHPPRRLVFLHLDGSVDTLPKHGAPVVHDEVEVGFVG 270
>gi|229521298|ref|ZP_04410718.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TM 11079-80]
gi|229341830|gb|EEO06832.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TM 11079-80]
Length = 339
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 220 PQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 269
>gi|219848165|ref|YP_002462598.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
gi|219542424|gb|ACL24162.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
Length = 322
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 140 DIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ +T +RI HG + D++P DL +S KGCY+GQE+++R++
Sbjct: 190 NAETAEVVRIEHGYPRFGHEITLDYIPLE-------ADLWRAVSFQKGCYVGQEIIARME 242
Query: 196 HRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGTL 230
R I K R + +T + P +P+ D E+G L
Sbjct: 243 SRGRIAKQLRGLRLTALPTIVP--TPLTVDGKEVGVL 277
>gi|21242812|ref|NP_642394.1| hypothetical protein XAC2074 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108298|gb|AAM36930.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 290
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 26/278 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 15 LHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHL 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FSI 122
++ + + +L + R + I I + EH + + I + +
Sbjct: 75 LMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELDL 134
Query: 123 ADVLLHRTW--GHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHDA 170
L RT + +A+ I+ T +L + + + P +
Sbjct: 135 GSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARLVEGQREQWTPQQL----- 189
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+D L S+ KGCY GQE+V+R H KR + + TD +G + D IGT+
Sbjct: 190 ALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRALQLLETDAAVDAGDAVALDGSAIGTV 248
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266
V G ALA+ ++ + G AL HG R +A
Sbjct: 249 VSVAGNLALAVLPLELT---LDAGTALQAGRHGARPRA 283
>gi|254672451|emb|CBA05856.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 304
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 28 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 86
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS----- 121
++ + +L + LR+ + EI G L + E + N +F ++ S
Sbjct: 87 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 146
Query: 122 -------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
I + T + A + HE+R + + T A+ +
Sbjct: 147 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK--------ETAVAQM 198
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 199 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEETG 256
>gi|153831095|ref|ZP_01983762.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873416|gb|EDL71551.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 323
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLS 253
>gi|325136232|gb|EGC58840.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579]
gi|325202024|gb|ADY97478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240149]
gi|325208223|gb|ADZ03675.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
NZ-05/33]
Length = 287
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 22/234 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124
++ + +L + LR+ + EI G L + E + N +F ++ S I
Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQQDSDGICS 129
Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ L T + A + HE+R + + T T +
Sbjct: 130 IALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAATK---ETAVAQMLNQHI 186
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 187 IGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239
>gi|225447955|ref|XP_002269147.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|298204501|emb|CBI23776.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
L N ISL KGCY GQE +SR+ + +++R I+ + P GSPI D ++G L
Sbjct: 318 LWNSISLNKGCYKGQETISRLITYDGVKQRLWGISLSGPAEP-GSPITADGKKVGKL 373
>gi|298488667|ref|ZP_07006696.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156740|gb|EFH97831.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 313
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 176 QIRAGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 230
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T ++++P G+ + +
Sbjct: 231 LYRLTLSSEEIPEPGTALFS 250
>gi|268591706|ref|ZP_06125927.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131]
gi|291312665|gb|EFE53118.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131]
Length = 327
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEE 62
+ L N I + G A +LQ +TAD+ TL A +A P+GK+ L ++
Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADIATLKQSHAL-TAHCDPKGKMWSDLRLFHHLDG 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFS-NSSFIDE 118
+++L S DS + +L Y + S V E +P + GV +E + ++ D
Sbjct: 82 YSYLLRT--SVADSQLAELKKYAVFSKVTFEKKPELKLVGVAGKGAREALATLFTALPDA 139
Query: 119 RFSI----ADVLLHRTWGH-------NEKIASDI-KTYHELRINH------------GIV 154
+ + A +LH NE+ A + +T +++N I+
Sbjct: 140 QNQVVTDDASTILHFALPTERFLVITNEETAQKMAQTLGAIQVNDEQWLALDIEAGFAII 199
Query: 155 DP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D + LP L L +GIS KGCY GQE+V+R + R ++ + GT
Sbjct: 200 DQQNSAQHLPQAT----NLQALPDGISFKKGCYTGQEMVARAKFRGANKRAMYTLKGTGT 255
Query: 213 LPP 215
P
Sbjct: 256 TIP 258
>gi|297193546|ref|ZP_06910944.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718178|gb|EDY62086.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 323
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 22/231 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS++ + V G+ + +L ++T V L A + IL+ G I LY + +
Sbjct: 44 VDLSHRGVVTVSGEERLSWLHLLLTQHVTDLSPGQATEALILSAHGHIEHALYLVD---D 100
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+T ++ R++LI L FYK + V V L +
Sbjct: 101 GETVWAHVEPGTREALIGYLESMKFFYK--AEVADRTDDFAVVHLPAGSIAEVPEGVVVR 158
Query: 118 ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDF-LPSTIFPHDALM 172
E D+ L R ++G A I Y LR+ P F PH+ L
Sbjct: 159 ETAHGRDLFLPRADLESFGAAAGPAVGILAYEALRVESH--RPRLGFETDHRTIPHE-LG 215
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTD-DLPPSGSPI 220
+ + + L KGCY GQE V+R+ + +R + + G++ LPP G+P+
Sbjct: 216 WIGSAVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPPGTPV 266
>gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119870652|ref|YP_940604.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
KMS]
gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
KMS]
Length = 356
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 176 NGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ + R ++R + + GT D P +G P+L +G +
Sbjct: 235 SAVHLDKGCYRGQETVARVHNLGKPPRMLVR---LHLDGTTDRPSTGDPVLAGGRTVGRV 291
Query: 231 GVVV-----GKKALAIAR 243
G VV G ALA+ +
Sbjct: 292 GTVVEHIDDGPVALALVK 309
>gi|71735285|ref|YP_276095.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71555838|gb|AAZ35049.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 315
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILT 222
+ + +
Sbjct: 248 TALFS 252
>gi|257486552|ref|ZP_05640593.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|330989043|gb|EGH87146.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331010035|gb|EGH90091.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 315
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILT 222
+ + +
Sbjct: 248 TALFS 252
>gi|320327157|gb|EFW83171.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330879268|gb|EGH13417.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 315
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILT 222
+ + +
Sbjct: 248 TALFS 252
>gi|313105580|ref|ZP_07791846.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa
39016]
gi|310878348|gb|EFQ36942.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa
39016]
Length = 314
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + G D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALGGDEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
JLS]
gi|126237284|gb|ABO00685.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
JLS]
Length = 356
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 176 NGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ + R ++R + + GT D P +G P+L +G +
Sbjct: 235 SAVHLDKGCYRGQETVARVHNLGKPPRMLVR---LHLDGTTDRPSTGDPVLAGGRTVGRV 291
Query: 231 GVVV-----GKKALAIAR 243
G VV G ALA+ +
Sbjct: 292 GTVVEHIDDGPVALALVK 309
>gi|289628133|ref|ZP_06461087.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649901|ref|ZP_06481244.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. 2250]
gi|330871252|gb|EGH05961.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 315
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILT 222
+ + +
Sbjct: 248 TALFS 252
>gi|255325915|ref|ZP_05367007.1| glycine cleavage T-protein, C- barrel [Corynebacterium
tuberculostearicum SK141]
gi|255297127|gb|EET76452.1| glycine cleavage T-protein, C- barrel [Corynebacterium
tuberculostearicum SK141]
Length = 354
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I+V GK A FL +++ + P G+ L QG IL + I + + D F+
Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRTD-DAFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEHTFSNSS 114
+++ ++ DSL L S V +E I + L ++++ +S
Sbjct: 110 IDVPAAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWSGIK 169
Query: 115 FID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA- 170
+D R S+ + H T +R + + D + PH+
Sbjct: 170 RVDLGVPRESLVEATKHLEESGARLAGLMAFTAERVRAREPELAADLD---NKSIPHEVP 226
Query: 171 -----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
+D + L KGCY GQE V+R++ N+ R +++ D P + DDI
Sbjct: 227 QWISRSVDNPAHVHLNKGCYRGQETVARVE--NLGRSPRLLVQLHLDGSAPQRPNVGDDI 284
Query: 226 -----EIGTLGVVV 234
++G +G +V
Sbjct: 285 TFNGRKVGRIGTIV 298
>gi|320325557|gb|EFW81619.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. B076]
Length = 315
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 193 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILT 222
+ + +
Sbjct: 248 TALFS 252
>gi|322370098|ref|ZP_08044660.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
gi|320550434|gb|EFW92086.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
Length = 372
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG--TDDLPPSGSPILTDDIEIG 228
++ L N + KGCY+GQEVVSR+++R +R + G + +P +G+ + D +G
Sbjct: 254 VLGLRNALDFEKGCYVGQEVVSRVENRGQPSRR---LAGLLPESVPEAGAAVFAGDEVVG 310
Query: 229 --TLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
T G+ + A + V++ ++ G LTV
Sbjct: 311 EVTRGIESPSRGEPAA-MALVNYDVEIGSGLTVR 343
>gi|198283240|ref|YP_002219561.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667779|ref|YP_002425823.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247761|gb|ACH83354.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519992|gb|ACK80578.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 321
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 110/290 (37%), Gaps = 53/290 (18%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
I G A FLQ + D+ L + S+ T +G+++ F + + D F L +
Sbjct: 16 GLIHASGVDAEKFLQGQFSNDLRALASGHGQWSSYSTAKGRMIANFYVQRDGSD-FWLSL 74
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA------ 123
D++I++L +++ + + I+ +L+ H + IA
Sbjct: 75 ADDMADTVIERLRKFRMMAKLEIKRGEPEFTLLA---VHGNGAGELLGRALGIALGKSGN 131
Query: 124 ------DVLLHR-TWGHNEKI-----ASDIKTYHE-------------------LRINHG 152
D ++ R W E AS ++ ++ G
Sbjct: 132 SGVVHDDAIITRLPWAEAEAFLIILPASRVEALSAKLGAAGARSGAAEDWRLWAIQAGVG 191
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ T I P + +++L GI+ KGCY GQE+V+R + ++ + + +
Sbjct: 192 MISRATT---EKIIPQELNLEVLGGINFKKGCYPGQEIVARSHYLGKLKNQTYRVAASAP 248
Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKG 254
L +G I + ++G+V+ G ALA+ R ++ G
Sbjct: 249 L-QAGEEIFCTSMGAQSIGIVINAAQDPLGGFAALAVLRAANAGESLMAG 297
>gi|66047189|ref|YP_237030.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae B728a]
gi|63257896|gb|AAY38992.1| Glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae B728a]
Length = 315
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R+ G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 178 QIRVGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 232
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T +++P G+ + +
Sbjct: 233 LYRLTLSGEEIPQPGTALFS 252
>gi|242240709|ref|YP_002988890.1| folate-binding protein YgfZ [Dickeya dadantii Ech703]
gi|242132766|gb|ACS87068.1| folate-binding protein YgfZ [Dickeya dadantii Ech703]
Length = 328
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+D + + L I G P D S F P + L IS TKGCY GQE+V+R ++R
Sbjct: 185 NDSRQWLALDIAAG--QPIIDSANSAQFIPQATNLQALQAISFTKGCYTGQEMVARAKYR 242
Query: 198 NIIRKRPMIITGT-DDLPPSG 217
++ ++GT LP +G
Sbjct: 243 GANKRALYWLSGTATSLPSAG 263
>gi|312959548|ref|ZP_07774065.1| glycine cleavage T protein [Pseudomonas fluorescens WH6]
gi|311286265|gb|EFQ64829.1| glycine cleavage T protein [Pseudomonas fluorescens WH6]
Length = 313
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
++R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 176 QIRAGIGQVMPQTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232
Query: 206 IIT-GTDDLPPSGSPILT 222
+ +P G+P+ +
Sbjct: 233 RLKLDAAQMPEPGTPLFS 250
>gi|297565303|ref|YP_003684275.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
gi|296849752|gb|ADH62767.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
Length = 339
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 142 KTYHELRINHGIVDPNTDF--LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ Y R+ G+ D LP + L +S KGCY+GQE+++R++ R
Sbjct: 203 EAYRVWRVEQGVADLEDALGELPQEV-------GLEARVSYKKGCYLGQEIMARLEARGN 255
Query: 200 IRKRPMIITGTDDLPPS 216
R + M + G LPP
Sbjct: 256 TRYQLMGLLGQQPLPPE 272
>gi|330889491|gb|EGH22152.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. mori str. 301020]
Length = 293
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 171 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 225
Query: 218 SPILT 222
+ + +
Sbjct: 226 TALFS 230
>gi|327479782|gb|AEA83092.1| aminomethyltransferase [Pseudomonas stutzeri DSM 4166]
Length = 315
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 35/227 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ + V G A FLQ +T ++ L + A TP+G++ F I E D +
Sbjct: 10 LSHEGVLAVRGPDASKFLQGQLTCNLNYLDAHTSSLGARCTPKGRMQSSFRIVP-EGDGY 68
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHT 109
+L + + L Y + S + + + G+ LS +
Sbjct: 69 LLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIADGDGSLVSLGLDLSQAADSI 128
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-HELRINHGIVDP------------ 156
+ I R L E++ + + E+ +N ++D
Sbjct: 129 VRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWLLDQVRAGIGQVFGST 188
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I + L G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRR 230
>gi|237729839|ref|ZP_04560320.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2]
gi|226908445|gb|EEH94363.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2]
Length = 327
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L+ + G E ++ + + L I GI P D S F P
Sbjct: 159 ERFLLIVDATTAETLVEKLRGEAE--LNNSQQWLALDIEAGI--PVIDTANSAQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ + G P +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGAAGRVPEAG----EDLEL 267
>gi|149910165|ref|ZP_01898811.1| aminomethyltransferase-like protein [Moritella sp. PE36]
gi|149806751|gb|EDM66715.1| aminomethyltransferase-like protein [Moritella sp. PE36]
Length = 328
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ S P + +GIS TKGCY GQE V+R ++R ++ I++G
Sbjct: 205 MSSVQIPQAFNLQAYDGISFTKGCYTGQETVARAKYRGTNKRAMAILSG 253
>gi|299066793|emb|CBJ37987.1| putative aminomethyl transferase [Ralstonia solanacearum CMR15]
Length = 346
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 230 PQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRR 266
>gi|238026999|ref|YP_002911230.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
gi|237876193|gb|ACR28526.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
Length = 376
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E RI +V+ F+P + D++ I+ KGCY GQE+V+R Q+R I++R
Sbjct: 212 EPRITQPVVE---QFVPQMVN-----YDVIGAINFRKGCYPGQEIVARSQYRGTIKRR 261
>gi|269960415|ref|ZP_06174788.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834842|gb|EEZ88928.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 322
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247
>gi|17546501|ref|NP_519903.1| hypothetical protein RSc1782 [Ralstonia solanacearum GMI1000]
gi|17428799|emb|CAD15484.1| putative glycine cleavage t protein (aminomethyl transferase)
[Ralstonia solanacearum GMI1000]
Length = 346
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 230 PQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRR 266
>gi|110834505|ref|YP_693364.1| hypothetical protein ABO_1644 [Alcanivorax borkumensis SK2]
gi|110647616|emb|CAL17092.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 315
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + D +L
Sbjct: 31 AIIRAHGEEAGHYLQGQLSCDLREVDNGGHLTGMHLSLKGRGLVSVRIVRDGNDYLML-C 89
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------HTFSNSSFIDERF 120
+ +++I L+ Y+LR+ V ++ V+L + + N + R+
Sbjct: 90 PAGQSEAVIKSLMKYRLRAKVEFQVDN-QAVILGLSGALPGALPQPGQSTRNDQGLWLRY 148
Query: 121 SIADVLL--------HRTWGHN--EKIASDIKTYH--ELRINHGIVDPNTD--FLPSTIF 166
D L W E+ A + + ++ G+V P + FLP +
Sbjct: 149 PNTDHALLITHTEQAEAVWAAQAQERTALNGNGWRLADIDAGEGMVYPGAEDLFLPQVLN 208
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D+ G++ KGCY GQEVV+R+ + +++R + T D+
Sbjct: 209 -----YDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRVDYTADM 250
>gi|288550368|ref|ZP_05970159.2| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316]
gi|288315642|gb|EFC54580.1| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316]
Length = 298
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 40/247 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G + +LQ +TADV L +A P+GK+ + + +D F RS
Sbjct: 4 LTGADSEKYLQGQVTADVAQLTEHQHLLAAHCDPKGKMWSNLRLFR-RQDGFAFIERRSL 62
Query: 74 RDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSNSSFID---------- 117
RD+ + +L Y + S V I + + G ++ F+ D
Sbjct: 63 RDAQLAELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFAALPDADKPLVSEGVTS 122
Query: 118 --------ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
ERF + A+ + G E ++ + + L I G+ P D S
Sbjct: 123 LLWFEHPAERFLLVTDEATAERVTEALRG--EAQFNNSQQWLALNIEAGL--PVIDAANS 178
Query: 164 TIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPIL 221
F P + L GIS KGCY GQE+V+R + R ++ + G +P +G I
Sbjct: 179 AQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAGRVPQAGEDI- 237
Query: 222 TDDIEIG 228
+++IG
Sbjct: 238 --ELKIG 242
>gi|254037943|ref|ZP_04872001.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43]
gi|226839567|gb|EEH71588.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43]
Length = 326
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 364
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG
Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSADRPATGDPVQAGGRAVGRLG 300
Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269
VV G ALA + R D A+ G V V S P
Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344
>gi|119485425|ref|ZP_01619753.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
gi|119457181|gb|EAW38307.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
Length = 349
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
IA +T+ +LRI G P+++ L P +A L IS KGCYIGQE ++R+
Sbjct: 213 IAMGNRTWEQLRIEQGRPVPDSE-LTDDYNPLEA--GLWKTISFEKGCYIGQETIARLNT 269
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
++++ + + P G+ I +D ++G L + KA
Sbjct: 270 YKGVKQQLWGLK-LEAAVPVGTEIKVEDKKVGKLTSFIETKA 310
>gi|300691470|ref|YP_003752465.1| aminomethyl transferase [Ralstonia solanacearum PSI07]
gi|299078530|emb|CBJ51185.1| putative aminomethyl transferase [Ralstonia solanacearum PSI07]
Length = 346
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 230 PQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRR 266
>gi|320333227|ref|YP_004169938.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211]
gi|319754516|gb|ADV66273.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211]
Length = 287
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D D + P + +D IS KGCY+GQE+++R++ R R R +
Sbjct: 169 RLEAGVPDVPADEW-RGVLPQEVGLDF--AISYRKGCYVGQEIMARLEARGNTRYRLARL 225
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250
TG + LP +G G G LA R + D A
Sbjct: 226 TG-EGLPAHADVTDAAGKVVGRTGASTGAVTLARLRKEFADGA 267
>gi|253988688|ref|YP_003040044.1| global regulator [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|211637988|emb|CAR66616.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780138|emb|CAQ83299.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 331
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 153 IVDP--NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
++DP +T F+P L L GI KGCY GQE+V+R ++R ++ + G+
Sbjct: 199 VIDPANSTQFIPQAT----NLQALEGGICFKKGCYTGQEMVARAKYRGANKRAMYWLAGS 254
Query: 211 DDLPPSGSPILTDDIE 226
+ P+ DD+E
Sbjct: 255 ----AAKIPVAGDDLE 266
>gi|320155310|ref|YP_004187689.1| Fe/S cluster synthesis/repair in oxidative stress protein [Vibrio
vulnificus MO6-24/O]
gi|319930622|gb|ADV85486.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Vibrio vulnificus MO6-24/O]
Length = 324
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYADGYA 85
Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110
+L+ D+S D + +L +F K+ NV + +Q + L+ N E TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVD--PN-TDFLPS 163
+ + + + S LL +++ + + T H L + I++ P F +
Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPAFAQN 202
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + +NGIS KGCY GQE V+R ++R I ++ ++G
Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 249
>gi|324017296|gb|EGB86515.1| folate-binding protein YgfZ [Escherichia coli MS 117-3]
Length = 305
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246
>gi|315656014|ref|ZP_07908912.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333]
gi|315490078|gb|EFU79705.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333]
Length = 368
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192
N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+
Sbjct: 203 NALMKADLGAWEAVRISLWHPRLGCEGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 259
Query: 193 RIQHRNIIRKRPMII---TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247
++ +R +R + ++LP GSP+ +D E+G L V + +
Sbjct: 260 KLTNRGRPPRRLTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 319
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ L V G R S
Sbjct: 320 KRQVDPAEMLLVEGTRAAQS 339
>gi|300815649|ref|ZP_07095873.1| folate-binding protein YgfZ [Escherichia coli MS 107-1]
gi|300820703|ref|ZP_07100854.1| folate-binding protein YgfZ [Escherichia coli MS 119-7]
gi|300906551|ref|ZP_07124242.1| folate-binding protein YgfZ [Escherichia coli MS 84-1]
gi|300925120|ref|ZP_07141034.1| folate-binding protein YgfZ [Escherichia coli MS 182-1]
gi|300928165|ref|ZP_07143707.1| folate-binding protein YgfZ [Escherichia coli MS 187-1]
gi|300947622|ref|ZP_07161793.1| folate-binding protein YgfZ [Escherichia coli MS 116-1]
gi|300954261|ref|ZP_07166724.1| folate-binding protein YgfZ [Escherichia coli MS 175-1]
gi|301303057|ref|ZP_07209184.1| folate-binding protein YgfZ [Escherichia coli MS 124-1]
gi|301327300|ref|ZP_07220556.1| folate-binding protein YgfZ [Escherichia coli MS 78-1]
gi|301643751|ref|ZP_07243789.1| folate-binding protein YgfZ [Escherichia coli MS 146-1]
gi|309793971|ref|ZP_07688396.1| folate-binding protein YgfZ [Escherichia coli MS 145-7]
gi|281602231|gb|ADA75215.1| tRNA-modifying protein ygfZ [Shigella flexneri 2002017]
gi|300318722|gb|EFJ68506.1| folate-binding protein YgfZ [Escherichia coli MS 175-1]
gi|300401590|gb|EFJ85128.1| folate-binding protein YgfZ [Escherichia coli MS 84-1]
gi|300418722|gb|EFK02033.1| folate-binding protein YgfZ [Escherichia coli MS 182-1]
gi|300452797|gb|EFK16417.1| folate-binding protein YgfZ [Escherichia coli MS 116-1]
gi|300463805|gb|EFK27298.1| folate-binding protein YgfZ [Escherichia coli MS 187-1]
gi|300526967|gb|EFK48036.1| folate-binding protein YgfZ [Escherichia coli MS 119-7]
gi|300531578|gb|EFK52640.1| folate-binding protein YgfZ [Escherichia coli MS 107-1]
gi|300841721|gb|EFK69481.1| folate-binding protein YgfZ [Escherichia coli MS 124-1]
gi|300846163|gb|EFK73923.1| folate-binding protein YgfZ [Escherichia coli MS 78-1]
gi|301077850|gb|EFK92656.1| folate-binding protein YgfZ [Escherichia coli MS 146-1]
gi|308122378|gb|EFO59640.1| folate-binding protein YgfZ [Escherichia coli MS 145-7]
gi|315256782|gb|EFU36750.1| folate-binding protein YgfZ [Escherichia coli MS 85-1]
Length = 305
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246
>gi|118577999|sp|Q7MHM7|YGFZ_VIBVY RecName: Full=tRNA-modifying protein ygfZ
Length = 324
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 85
Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110
+L+ D+S D + +L +F K+ NV + +Q + L+ N E TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 144
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNT---DFLPS 163
+ + + + S LL +++ + + T H L + I++ + F +
Sbjct: 145 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPAFAQN 202
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + +NGIS KGCY GQE V+R ++R I ++ ++G
Sbjct: 203 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 249
>gi|70728823|ref|YP_258572.1| aminomethyl transferase [Pseudomonas fluorescens Pf-5]
gi|68343122|gb|AAY90728.1| aminomethyl transferase, putative [Pseudomonas fluorescens Pf-5]
Length = 313
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-- 203
++R G V P T L P + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 176 QVRAGLGQVMPETREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232
Query: 204 PMIITGTDDLPPSGSPILT 222
+ + G D LP G+ +
Sbjct: 233 RLALPG-DALPVPGTALFA 250
>gi|237798703|ref|ZP_04587164.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806136|ref|ZP_04592840.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021556|gb|EGI01613.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027249|gb|EGI07304.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 293
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
+F+P I + + G+S KGCY GQE+V+R+Q+ +++R +T D +P G
Sbjct: 171 EFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQGDQVPEPG 225
Query: 218 SPILT 222
+ + +
Sbjct: 226 TAVFS 230
>gi|262042539|ref|ZP_06015696.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010968|ref|ZP_08306933.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3]
gi|259040099|gb|EEW41213.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534345|gb|EGF60955.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3]
Length = 306
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + L I G+ P D S F P + L GIS KGCY GQE+V+R + R
Sbjct: 166 QQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGAN 223
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEI 227
++ ++GT S P +D+E+
Sbjct: 224 KRALWTLSGT----ASRVPEAGEDLEL 246
>gi|296107164|ref|YP_003618864.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy]
gi|295649065|gb|ADG24912.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy]
Length = 329
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 196 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 250
Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230
++ + +D+ SG + +D E+G L
Sbjct: 251 TLKHELKKFVIQSDNQLYSGQKLFKSDEDTEVGEL 285
>gi|37681026|ref|NP_935635.1| aminomethyltransferase [Vibrio vulnificus YJ016]
gi|37199776|dbj|BAC95606.1| predicted aminomethyltransferase [Vibrio vulnificus YJ016]
Length = 343
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 45 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 104
Query: 66 ILEIDRSKRDSLIDKL----LFYKLRSNV-------IIEIQPINGVV-LSWNQEH---TF 110
+L+ D+S D + +L +F K+ NV + +Q + L+ N E TF
Sbjct: 105 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 163
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNT---DFLPS 163
+ + + + S LL +++ + + T H L + I++ + F +
Sbjct: 164 AQGTAV--KISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPAFAQN 221
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + +NGIS KGCY GQE V+R ++R I ++ ++G
Sbjct: 222 EHIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGA 268
>gi|312964841|ref|ZP_07779081.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75]
gi|312290397|gb|EFR18277.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75]
Length = 326
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174
IDE + A++L + G E ++ + + L I G P D S F P +
Sbjct: 165 IDE--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQATNLQA 218
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 219 LGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|323154590|gb|EFZ40789.1| tRNA-modifying protein ygfZ [Escherichia coli EPECa14]
Length = 220
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 53 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 108
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 109 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 161
>gi|215488198|ref|YP_002330629.1| putative global regulator [Escherichia coli O127:H6 str. E2348/69]
gi|254814148|sp|B7UHU7|YGFZ_ECO27 RecName: Full=tRNA-modifying protein ygfZ
gi|215266270|emb|CAS10699.1| predicted folate-dependent regulatory protein [Escherichia coli
O127:H6 str. E2348/69]
Length = 326
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDL 174
IDE + A++L + G E ++ + + L I G P D S F P +
Sbjct: 165 IDE--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQATNLQA 218
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 219 LGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|218701607|ref|YP_002409236.1| putative global regulator [Escherichia coli IAI39]
gi|226730794|sp|B7NW39|YGFZ_ECO7I RecName: Full=tRNA-modifying protein ygfZ
gi|218371593|emb|CAR19432.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli IAI39]
Length = 326
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|116048674|ref|YP_792526.1| hypothetical protein PA14_54480 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115583895|gb|ABJ09910.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 314
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPSTIFPHDALMDLLNGISL 180
A+ +L R H+ + D ++R G V T F+P I + + G+S
Sbjct: 153 AEAVLARLREHSREAPLDDWLLGQVRAGIGQVFGATRELFIPQMIN-----LQAVGGVSF 207
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPILT 222
KGCY GQE+V+R+Q+ +++R + D++P G+ + +
Sbjct: 208 KKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGTGLFS 250
>gi|156082666|ref|XP_001608817.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796067|gb|EDO05249.1| conserved hypothetical protein [Babesia bovis]
Length = 324
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEED 63
L N+ + + GK ++ FLQ + + DV +L I + + L G+IL L+S+ + +
Sbjct: 8 LRNRGLLTLSGKDSLSFLQGLTSTDVSSLTKNIKKIFPTLFLGSDGRILSDGLLSR-DGE 66
Query: 64 TFILE------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+LE I R K + +D + N I + ++ ++ + Q T S
Sbjct: 67 RILLETASGNIPTLSNLIARRKVSAKVDYSIEKNYSVNAYIPKELLH-LIRNGPQGDTVS 125
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRIN-HGIVDPNTDFLPSTI--- 165
N+S + +L R + + DI + L + +G P LP +
Sbjct: 126 NTSLQPPDYECDMPILARKYIAYDATNQYRDITEPYRLYLTLNGFALP----LPKEVKTL 181
Query: 166 --FPHDALMDLLNGISLTKGCYIGQEVVSRI 194
P D + + ++ KGCY+GQE+++R+
Sbjct: 182 KLLPQDMFLHRMGLVAQNKGCYVGQEIMNRV 212
>gi|329894324|ref|ZP_08270194.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [gamma proteobacterium IMCC3088]
gi|328923120|gb|EGG30443.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [gamma proteobacterium IMCC3088]
Length = 272
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S +++ G A LQ +T DV +L + + +G++ L + K + L +
Sbjct: 11 SALELIGPDAAKTLQGQLTNDVESLRNRKGLDGLLCNLKGRVELVVKVYKHSPEQLTLVV 70
Query: 70 DRSKRDSLIDKLL----FYKLRSNVI------IEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ D+L +L F K R N + + I P + + F + I +
Sbjct: 71 PTANIDALKRRLAPYVAFSKSRLNELNLETYSLVIAPPDSDPIEVPAGLWFGDLGLISPQ 130
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGI 178
A L R + AS I +H RI+ G++ + S ++ AL +D L +
Sbjct: 131 ---AINQLTRPY-----TASSIDEFHHWRIHSGMIQLTPE--QSGLYTPQALSLDRLGYV 180
Query: 179 SLTKGCYIGQEVVSRIQHRN 198
S KGCY+GQE+++R+ ++
Sbjct: 181 SFKKGCYMGQEIIARLHYKG 200
>gi|153835742|ref|ZP_01988409.1| protein YgfZ [Vibrio harveyi HY01]
gi|148867601|gb|EDL66905.1| protein YgfZ [Vibrio harveyi HY01]
Length = 322
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGA 247
>gi|156975802|ref|YP_001446709.1| aminomethyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|166979588|sp|A7MTS4|YGFZ_VIBHB RecName: Full=tRNA-modifying protein ygfZ
gi|156527396|gb|ABU72482.1| hypothetical protein VIBHAR_03546 [Vibrio harveyi ATCC BAA-1116]
Length = 322
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246
>gi|93005000|ref|YP_579437.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter
cryohalolentis K5]
gi|92392678|gb|ABE73953.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter
cryohalolentis K5]
Length = 255
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 46/261 (17%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLIS 58
+++ L S + + G+ A FLQ +T DV L L Y+ A AI +G+I I
Sbjct: 5 INTAALPQFSQLSIQGEDAEKFLQGQLTCDVTKLGLSYQAA---AIGNLKGRIEFGIWIK 61
Query: 59 KIEEDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
K E F + I ++ L F K ++ I P
Sbjct: 62 KQAEKHFDMVISADCAEAFQGHLKKFGAFSKCDTSAPTPIYPC----------------- 104
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDA 170
IDE + + H T + +I+ + + I G + +F P + H
Sbjct: 105 VIDEVPTFSHQDDHNT-------SKNIQAWMQSSIATGNYWIVAATQGEFQPQELRLHQ- 156
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE---- 226
G+ KGCY+GQEV++RI ++ + + GT +P+ + ++
Sbjct: 157 ----RGGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPVAGEKLDKVQV 212
Query: 227 IGTLGVVVGKKALAIARIDKV 247
+ + G +AL +AR +++
Sbjct: 213 VNAITTSEGFEALVVARPEQL 233
>gi|170765986|ref|ZP_02900797.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627]
gi|170125132|gb|EDS94063.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627]
Length = 326
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L+ + G E ++ + + L I G+ P D S F P
Sbjct: 159 ERFLLVTDEATANTLVDKLRGEAE--LNNSQQWLALNIEAGL--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEIGT 229
+ L GIS KGCY GQE+V+R + R ++ ++ G LP +G + ++++G
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLVGHASRLPEAGEDL---ELKMGE 271
Query: 230 LGVVVGKKALAIARID 245
G A+ R D
Sbjct: 272 NWRRTGTVLAAVKRED 287
>gi|315656111|ref|ZP_07909002.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315493113|gb|EFU82713.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 368
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192
N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+
Sbjct: 203 NALMKADLGAWEAVRISLWHPRLGCEGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 259
Query: 193 RIQHRNIIRKRPMII---TGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247
++ +R +R + ++LP GSP+ +D E+G L V + +
Sbjct: 260 KLTNRGRPPRRLTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 319
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ L V G R S
Sbjct: 320 KRQVNPAEILLVEGTRAAQS 339
>gi|285018598|ref|YP_003376309.1| glycine cleavage system t (aminomethyltransferase) protein
[Xanthomonas albilineans GPE PC73]
gi|283473816|emb|CBA16318.1| putative glycine cleavage system t (aminomethyltransferase) protein
[Xanthomonas albilineans]
Length = 288
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L+ S+ KGCY GQE+V+R H KR + + + +G+P+L +
Sbjct: 186 PQQLGLDRLHAFSVKKGCYPGQEIVART-HFLGKAKRALQLLELEAPVATGAPVLREGEP 244
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IG++ + G ALA+ +++ + G++V+ HW
Sbjct: 245 IGSVISIAGTLALAVLPLEETPPS----------GLQVETRAAHW 279
>gi|82545479|ref|YP_409426.1| global regulator [Shigella boydii Sb227]
gi|118577995|sp|Q31WG0|YGFZ_SHIBS RecName: Full=tRNA-modifying protein ygfZ
gi|81246890|gb|ABB67598.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320184557|gb|EFW59358.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella flexneri CDC 796-83]
gi|332090898|gb|EGI95989.1| tRNA-modifying protein ygfZ [Shigella boydii 3594-74]
Length = 326
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|320540113|ref|ZP_08039768.1| putative predicted folate-dependent regulatory protein [Serratia
symbiotica str. Tucson]
gi|320029779|gb|EFW11803.1| putative predicted folate-dependent regulatory protein [Serratia
symbiotica str. Tucson]
Length = 328
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 133 HNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
H++ +D + + L I G I+D + + P + L GIS +KGCY GQE+
Sbjct: 179 HDQAELNDSRQWLALDIEAGYPIIDNANS---AQLIPQATNLQALQGISFSKGCYTGQEM 235
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
V+R + R ++ + G P + +D+E+
Sbjct: 236 VARAKFRGANKRALYWLEGRAGRTPQAA----EDLEL 268
>gi|284008423|emb|CBA74869.1| aminomethyltransferase [Arsenophonus nasoniae]
Length = 328
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 37/246 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-T 64
L++ SFI G A +LQ +TAD+ TL + +A +GK+ + E
Sbjct: 25 LNDWSFITATGVDAEKYLQGQLTADITTLTPQQHILTAHCDAKGKMWSTLRLFHYNEGFG 84
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNSSFIDERFS 121
+IL + + + +L Y + S + + QP + GV ++ ++ S + ++
Sbjct: 85 YILRTSVAAKQ--LSELKKYAVFSQITLSQQPNIMLLGVAGQGARDRLNNHFSQLPDQEK 142
Query: 122 IADVLLHRTWGH----NEK--IASDIKTYHELR----------------INHGI----VD 155
L T H +E+ I +D T EL I GI V+
Sbjct: 143 AVIHLEQTTLLHFSVPSERFLIVTDSATATELTKHFPQHGDSQQWLAFDIAAGIANIDVE 202
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLP 214
+ F+P + L L IS KGCY GQE V+R ++R ++ + GT + LP
Sbjct: 203 NSEQFIPQAV----NLQALPASISFHKGCYSGQETVARAKYRGANKRAMFWLAGTANTLP 258
Query: 215 PSGSPI 220
+G I
Sbjct: 259 KTGEAI 264
>gi|156743472|ref|YP_001433601.1| glycine cleavage T protein [Roseiflexus castenholzii DSM 13941]
gi|156234800|gb|ABU59583.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
castenholzii DSM 13941]
Length = 337
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LL+ +S TKGCY+GQE+++R++ R + KR
Sbjct: 236 LLDAVSFTKGCYVGQEIIARMESRGRLAKR 265
>gi|238896438|ref|YP_002921176.1| putative global regulator [Klebsiella pneumoniae NTUH-K2044]
gi|238548758|dbj|BAH65109.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 327
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V
Sbjct: 178 RGEAQFNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+R + R ++ ++GT +P SG +D+E+
Sbjct: 236 ARAKFRGANKRALWTLSGTASRVPESG-----EDLEL 267
>gi|197123340|ref|YP_002135291.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
gi|196173189|gb|ACG74162.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
Length = 304
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
D+ LRI G+ D + ++ P +A + IS +KGCYIGQEVV R R
Sbjct: 170 DLAELESLRILAGVARFGAD-MDASRLPMEAGLTR-AAISFSKGCYIGQEVVLRATARGH 227
Query: 200 IRKRPMIITGTDDLPPS---GSPILTDDIEIGTL 230
+++ + + +LPP G+P++ E+G +
Sbjct: 228 LQRGLVQL----ELPPGAGPGTPLVAGGQEVGAV 257
>gi|309785295|ref|ZP_07679926.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617]
gi|308926415|gb|EFP71891.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617]
Length = 305
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 246
>gi|171058559|ref|YP_001790908.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6]
gi|170776004|gb|ACB34143.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6]
Length = 319
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 27/227 (11%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++ G A+ FL + ++ DV L AR +A QG++L L +K + L
Sbjct: 20 MRASGADAVSFLHSQLSNDVTRLDTGHARLAAYCNAQGRMLASLLYAKRSAEEVWLLCSA 79
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSSFIDER---- 119
+ +L + LR+ + VL W + + ER
Sbjct: 80 DLLPVTLKRLSMFVLRAKARLSDASGELAVLGLAGQAGADWLGADAPAGAWDKSERDGAM 139
Query: 120 -FSIADVLLHRTW---GHNEKIASDIKT--------YHELRINHGIVDPNTDFLPSTIFP 167
+ DV W G + ++ + L ++ GI P P
Sbjct: 140 HVRLPDVAGVPRWLWIGPAAAAEAVLQALPVVAESDWQWLDVSAGIA-PVVAATSGQFVP 198
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+L+ G+ KGCY GQEVV+R Q+ +++R ++ D+P
Sbjct: 199 QMLNYELVGGVDFKKGCYPGQEVVARSQYLGKLKRRAFLL--ASDVP 243
>gi|300936035|ref|ZP_07150983.1| folate-binding protein YgfZ [Escherichia coli MS 21-1]
gi|300458827|gb|EFK22320.1| folate-binding protein YgfZ [Escherichia coli MS 21-1]
Length = 305
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSRQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246
>gi|293449221|ref|ZP_06663642.1| global regulator [Escherichia coli B088]
gi|291322311|gb|EFE61740.1| global regulator [Escherichia coli B088]
Length = 326
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|325964194|ref|YP_004242100.1| glycine cleavage system protein T (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
gi|323470281|gb|ADX73966.1| glycine cleavage system T protein (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
Length = 361
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221
PH+ +DLL + L KGCY GQE +SR+ + +R + + LP +GSP+L
Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETISRVHNLGHPPRRLVFLQLDGSQHTLPQAGSPVL 288
Query: 222 TDDIEIGTLGVV-----VGKKALAI 241
+ ++GT+ V +G ALA+
Sbjct: 289 LGERKVGTVTSVAQHYEMGPVALAV 313
>gi|126642848|ref|YP_001085832.1| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978]
Length = 217
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P + + G++ KGCY+GQE+V+R+ + + ++ GT D P + L +D+E
Sbjct: 115 PQELRLHQREGVNYDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQ-LHNDVE 173
Query: 227 I--------GTLGVVVGKKA 238
+ G + +VV K A
Sbjct: 174 VVNSTQTTDGYIALVVAKPA 193
>gi|118497380|ref|YP_898430.1| hypothetical protein FTN_0786 [Francisella tularensis subsp.
novicida U112]
gi|195536070|ref|ZP_03079077.1| hypothetical protein FTE_1029 [Francisella tularensis subsp.
novicida FTE]
gi|118423286|gb|ABK89676.1| protein of unknown function [Francisella novicida U112]
gi|194372547|gb|EDX27258.1| hypothetical protein FTE_1029 [Francisella tularensis subsp.
novicida FTE]
Length = 248
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62
+N ++V G FLQ + TAD+ L + +LT +G+I+ + I
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDSDILLTAFANLKGRIISLCFVKFISN 62
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ +L +++ D L+ L Y + S V P + L + + F N + + I
Sbjct: 63 EKLLLSVEQEVFDDLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLI 119
Query: 123 ADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG--- 177
+++ + N K+A+ IN + FLP A +DL N
Sbjct: 120 SEMTFEQVKKENIFNKLAT---------INAANFEK---FLP-------AELDLDNVDKV 160
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|74313456|ref|YP_311875.1| putative global regulator [Shigella sonnei Ss046]
gi|118577997|sp|Q3YXX2|YGFZ_SHISS RecName: Full=tRNA-modifying protein ygfZ
gi|73856933|gb|AAZ89640.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323167896|gb|EFZ53586.1| tRNA-modifying protein ygfZ [Shigella sonnei 53G]
Length = 326
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|187731975|ref|YP_001881668.1| putative global regulator [Shigella boydii CDC 3083-94]
gi|226730810|sp|B2U0R5|YGFZ_SHIB3 RecName: Full=tRNA-modifying protein ygfZ
gi|187428967|gb|ACD08241.1| tRNA-modifying protein [Shigella boydii CDC 3083-94]
gi|320175914|gb|EFW50992.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella dysenteriae CDC 74-1112]
Length = 326
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|16130800|ref|NP_417374.1| Hda suppressor; also involved in methylthio modification at
2-methylthio-6-iodeadenosine in tRNA [Escherichia coli
str. K-12 substr. MG1655]
gi|24114152|ref|NP_708662.1| putative global regulator [Shigella flexneri 2a str. 301]
gi|30064210|ref|NP_838381.1| putative global regulator [Shigella flexneri 2a str. 2457T]
gi|89109677|ref|AP_003457.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K-12 substr. W3110]
gi|110806801|ref|YP_690321.1| putative global regulator [Shigella flexneri 5 str. 8401]
gi|157156395|ref|YP_001464236.1| putative global regulator [Escherichia coli E24377A]
gi|157162358|ref|YP_001459676.1| putative global regulator [Escherichia coli HS]
gi|170082459|ref|YP_001731779.1| folate-dependent regulatory protein [Escherichia coli str. K-12
substr. DH10B]
gi|188494932|ref|ZP_03002202.1| tRNA-modifying protein [Escherichia coli 53638]
gi|191165963|ref|ZP_03027799.1| tRNA-modifying protein ygfZ [Escherichia coli B7A]
gi|193063561|ref|ZP_03044650.1| tRNA-modifying protein ygfZ [Escherichia coli E22]
gi|193070568|ref|ZP_03051507.1| tRNA-modifying protein ygfZ [Escherichia coli E110019]
gi|194426392|ref|ZP_03058947.1| tRNA-modifying protein ygfZ [Escherichia coli B171]
gi|194436847|ref|ZP_03068947.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1]
gi|218555446|ref|YP_002388359.1| putative global regulator [Escherichia coli IAI1]
gi|218696493|ref|YP_002404160.1| putative global regulator [Escherichia coli 55989]
gi|238902023|ref|YP_002927819.1| putative folate-dependent regulatory protein [Escherichia coli
BW2952]
gi|253772261|ref|YP_003035092.1| global regulator [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162810|ref|YP_003045918.1| putative global regulator [Escherichia coli B str. REL606]
gi|256019303|ref|ZP_05433168.1| putative global regulator [Shigella sp. D9]
gi|256024591|ref|ZP_05438456.1| putative global regulator [Escherichia sp. 4_1_40B]
gi|260845566|ref|YP_003223344.1| putative folate-dependent regulatory protein [Escherichia coli
O103:H2 str. 12009]
gi|297518191|ref|ZP_06936577.1| putative global regulator [Escherichia coli OP50]
gi|301027803|ref|ZP_07191108.1| folate-binding protein YgfZ [Escherichia coli MS 196-1]
gi|307139586|ref|ZP_07498942.1| putative global regulator [Escherichia coli H736]
gi|307310483|ref|ZP_07590131.1| folate-binding protein YgfZ [Escherichia coli W]
gi|312972860|ref|ZP_07787033.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70]
gi|331643589|ref|ZP_08344720.1| tRNA-modifying protein YgfZ [Escherichia coli H736]
gi|331669634|ref|ZP_08370480.1| tRNA-modifying protein YgfZ [Escherichia coli TA271]
gi|331678886|ref|ZP_08379560.1| tRNA-modifying protein YgfZ [Escherichia coli H591]
gi|332280417|ref|ZP_08392830.1| tRNA-modifying protein ygfZ [Shigella sp. D9]
gi|83287993|sp|P0ADE8|YGFZ_ECOLI RecName: Full=tRNA-modifying protein ygfZ
gi|83287994|sp|P0ADE9|YGFZ_SHIFL RecName: Full=tRNA-modifying protein ygfZ
gi|122366369|sp|Q0T0Z9|YGFZ_SHIF8 RecName: Full=tRNA-modifying protein ygfZ
gi|166979582|sp|A7ZR07|YGFZ_ECO24 RecName: Full=tRNA-modifying protein ygfZ
gi|166979583|sp|A8A439|YGFZ_ECOHS RecName: Full=tRNA-modifying protein ygfZ
gi|226730795|sp|B7LYG2|YGFZ_ECO8A RecName: Full=tRNA-modifying protein ygfZ
gi|226730796|sp|B1XEI5|YGFZ_ECODH RecName: Full=tRNA-modifying protein ygfZ
gi|254814149|sp|B7LF83|YGFZ_ECO55 RecName: Full=tRNA-modifying protein ygfZ
gi|259710249|sp|C5A0H0|YGFZ_ECOBW RecName: Full=tRNA-modifying protein ygfZ
gi|887848|gb|AAA83079.1| ORF_o326 [Escherichia coli]
gi|1789265|gb|AAC75936.1| Hda suppressor; also involved in methylthio modification at
2-methylthio-6-iodeadenosine in tRNA [Escherichia coli
str. K-12 substr. MG1655]
gi|24053292|gb|AAN44369.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042467|gb|AAP18191.1| hypothetical protein S3083 [Shigella flexneri 2a str. 2457T]
gi|85675710|dbj|BAE76963.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K12 substr. W3110]
gi|110616349|gb|ABF05016.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157068038|gb|ABV07293.1| tRNA-modifying protein ygfZ [Escherichia coli HS]
gi|157078425|gb|ABV18133.1| tRNA-modifying protein ygfZ [Escherichia coli E24377A]
gi|169890294|gb|ACB04001.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K-12 substr. DH10B]
gi|188490131|gb|EDU65234.1| tRNA-modifying protein [Escherichia coli 53638]
gi|190903911|gb|EDV63624.1| tRNA-modifying protein ygfZ [Escherichia coli B7A]
gi|192930838|gb|EDV83443.1| tRNA-modifying protein ygfZ [Escherichia coli E22]
gi|192956151|gb|EDV86615.1| tRNA-modifying protein ygfZ [Escherichia coli E110019]
gi|194415700|gb|EDX31967.1| tRNA-modifying protein ygfZ [Escherichia coli B171]
gi|194424329|gb|EDX40316.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1]
gi|218353225|emb|CAU99146.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli 55989]
gi|218362214|emb|CAQ99832.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli IAI1]
gi|238862419|gb|ACR64417.1| predicted folate-dependent regulatory protein [Escherichia coli
BW2952]
gi|242378429|emb|CAQ33210.1| folate-binding protein [Escherichia coli BL21(DE3)]
gi|253323305|gb|ACT27907.1| folate-binding protein YgfZ [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974711|gb|ACT40382.1| putative global regulator [Escherichia coli B str. REL606]
gi|253978877|gb|ACT44547.1| putative global regulator [Escherichia coli BL21(DE3)]
gi|257760713|dbj|BAI32210.1| predicted folate-dependent regulatory protein [Escherichia coli
O103:H2 str. 12009]
gi|260448056|gb|ACX38478.1| folate-binding protein YgfZ [Escherichia coli DH1]
gi|299879065|gb|EFI87276.1| folate-binding protein YgfZ [Escherichia coli MS 196-1]
gi|306909378|gb|EFN39873.1| folate-binding protein YgfZ [Escherichia coli W]
gi|309703258|emb|CBJ02593.1| tRNA-modifying protein [Escherichia coli ETEC H10407]
gi|310332802|gb|EFQ00016.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70]
gi|313647938|gb|EFS12384.1| tRNA-modifying protein ygfZ [Shigella flexneri 2a str. 2457T]
gi|315062202|gb|ADT76529.1| predicted folate-dependent regulatory protein [Escherichia coli W]
gi|315137497|dbj|BAJ44656.1| putative global regulator [Escherichia coli DH1]
gi|315614945|gb|EFU95583.1| tRNA-modifying protein ygfZ [Escherichia coli 3431]
gi|320202559|gb|EFW77129.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli EC4100B]
gi|323162510|gb|EFZ48360.1| tRNA-modifying protein ygfZ [Escherichia coli E128010]
gi|323183453|gb|EFZ68850.1| tRNA-modifying protein ygfZ [Escherichia coli 1357]
gi|323377214|gb|ADX49482.1| folate-binding protein YgfZ [Escherichia coli KO11]
gi|323935870|gb|EGB32169.1| folate-binding protein YgfZ [Escherichia coli E1520]
gi|323941581|gb|EGB37761.1| folate-binding protein YgfZ [Escherichia coli E482]
gi|323960805|gb|EGB56426.1| folate-binding protein YgfZ [Escherichia coli H489]
gi|323971664|gb|EGB66893.1| folate-binding protein YgfZ [Escherichia coli TA007]
gi|331037060|gb|EGI09284.1| tRNA-modifying protein YgfZ [Escherichia coli H736]
gi|331063302|gb|EGI35215.1| tRNA-modifying protein YgfZ [Escherichia coli TA271]
gi|331073716|gb|EGI45037.1| tRNA-modifying protein YgfZ [Escherichia coli H591]
gi|332102769|gb|EGJ06115.1| tRNA-modifying protein ygfZ [Shigella sp. D9]
gi|332344795|gb|AEE58129.1| tRNA-modifying protein YgfZ [Escherichia coli UMNK88]
gi|332753734|gb|EGJ84113.1| tRNA-modifying protein ygfZ [Shigella flexneri K-671]
gi|332754471|gb|EGJ84837.1| tRNA-modifying protein ygfZ [Shigella flexneri 2747-71]
gi|332765829|gb|EGJ96042.1| folate-dependent regulatory protein [Shigella flexneri 2930-71]
gi|332999669|gb|EGK19254.1| tRNA-modifying protein ygfZ [Shigella flexneri VA-6]
gi|333000715|gb|EGK20290.1| tRNA-modifying protein ygfZ [Shigella flexneri K-272]
gi|333015058|gb|EGK34401.1| tRNA-modifying protein ygfZ [Shigella flexneri K-304]
gi|333015229|gb|EGK34571.1| tRNA-modifying protein ygfZ [Shigella flexneri K-227]
Length = 326
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|315289438|gb|EFU48833.1| folate-binding protein YgfZ [Escherichia coli MS 110-3]
gi|315295687|gb|EFU55007.1| folate-binding protein YgfZ [Escherichia coli MS 16-3]
Length = 305
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246
>gi|227888448|ref|ZP_04006253.1| GCV family glycine cleavage complex aminomethyltransferase
[Escherichia coli 83972]
gi|300980307|ref|ZP_07174961.1| folate-binding protein YgfZ [Escherichia coli MS 45-1]
gi|301049317|ref|ZP_07196287.1| folate-binding protein YgfZ [Escherichia coli MS 185-1]
gi|227834717|gb|EEJ45183.1| GCV family glycine cleavage complex aminomethyltransferase
[Escherichia coli 83972]
gi|300298916|gb|EFJ55301.1| folate-binding protein YgfZ [Escherichia coli MS 185-1]
gi|300409315|gb|EFJ92853.1| folate-binding protein YgfZ [Escherichia coli MS 45-1]
gi|315293868|gb|EFU53220.1| folate-binding protein YgfZ [Escherichia coli MS 153-1]
Length = 305
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 138 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 193
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 194 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 246
>gi|209920352|ref|YP_002294436.1| putative global regulator [Escherichia coli SE11]
gi|260857021|ref|YP_003230912.1| putative folate-dependent regulatory protein [Escherichia coli
O26:H11 str. 11368]
gi|260869575|ref|YP_003235977.1| putative folate-dependent regulatory protein [Escherichia coli
O111:H- str. 11128]
gi|226730798|sp|B6I731|YGFZ_ECOSE RecName: Full=tRNA-modifying protein ygfZ
gi|209913611|dbj|BAG78685.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257755670|dbj|BAI27172.1| predicted folate-dependent regulatory protein [Escherichia coli
O26:H11 str. 11368]
gi|257765931|dbj|BAI37426.1| predicted folate-dependent regulatory protein [Escherichia coli
O111:H- str. 11128]
gi|323173896|gb|EFZ59525.1| tRNA-modifying protein ygfZ [Escherichia coli LT-68]
gi|323180343|gb|EFZ65895.1| tRNA-modifying protein ygfZ [Escherichia coli 1180]
gi|323946616|gb|EGB42639.1| folate-binding protein YgfZ [Escherichia coli H120]
gi|324119939|gb|EGC13818.1| folate-binding protein YgfZ [Escherichia coli E1167]
Length = 326
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|88855763|ref|ZP_01130426.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1]
gi|88815087|gb|EAR24946.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1]
Length = 343
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
S V L++++ + + G + +L ++ T + L + + +L P G+I +
Sbjct: 22 QSVVELADRAVLTITGPDRLTWLDSLTTQALTGLGAGDSAETLLLNPNGRIEHAMRVVDD 81
Query: 61 EEDTFILEIDRSKRDSL---IDKLLFY-----KLRSNVIIEIQ-------PI---NGVVL 102
E ++L ID S R++L +D++ F RS+ + I P+ + + L
Sbjct: 82 SETLWLL-IDGSAREALAKWLDRMRFTLRVEIADRSDDFVTIGSFGDLGLPVAVSHEIPL 140
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINH 151
WN +++ + ++S A+ TW + E + AS + LRI
Sbjct: 141 VWND--SWAAVARGGHQYSRAEQHPGATWNYRESLVAVDSDLSDFAASGSLAFEALRIAA 198
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209
+T+ +I PH+ L + + + L+KGCY GQE V+++ + +R ++ + G
Sbjct: 199 WRPWFSTEVDDRSI-PHE-LDWMRSAVHLSKGCYRGQETVAKVHNLGHPPRRLVLLHLDG 256
Query: 210 TDD-LPPSGSPILTDDIEIGTL 230
++ LP +G+ + + +GT+
Sbjct: 257 SEGALPEAGAEVSLGEKVVGTV 278
>gi|332752935|gb|EGJ83319.1| tRNA-modifying protein ygfZ [Shigella flexneri 4343-70]
gi|333000021|gb|EGK19604.1| tRNA-modifying protein ygfZ [Shigella flexneri K-218]
Length = 326
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSVSRLPEAG-----EDLEL 267
>gi|188534912|ref|YP_001908709.1| putative global regulator [Erwinia tasmaniensis Et1/99]
gi|188029954|emb|CAO97838.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 328
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 40/258 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISK 59
++ + L + + G I +LQ +T DV +P R +A +GK+ L +
Sbjct: 19 LTLISLEAWALVNASGADHISYLQGQVTLDVADMPASQHRPAAHCDAKGKMWSNLRLFHR 78
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------ 95
++ +I RS RD+ + +L Y + + + +
Sbjct: 79 MDGLAYIER--RSLRDNQLSELKKYAVFAKITLAADDESVLLGVAGFQARAALANLFSTL 136
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRIN 150
P G + + T ERF + + EK+A +D + L I
Sbjct: 137 PDAGSPVIQQDDSTLLWFDLPAERFLLV-TPAEKAAEIAEKLAGEAQLNDSTQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P D S F P + L IS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGF--PVIDAATSAQFIPQATNLQALGAISFKKGCYTGQEMVARAKFRGANKRALYWLAG 253
Query: 210 TDDLPPSGSPILTDDIEI 227
T + P+ D +E+
Sbjct: 254 TAGV----VPVANDALEM 267
>gi|77457584|ref|YP_347089.1| glycine cleavage T protein [Pseudomonas fluorescens Pf0-1]
gi|77381587|gb|ABA73100.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
++R G V P+T L P + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 176 QIRAGIGQVMPSTREL---FIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLY 232
Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+ +LP G+ + + G +G+ LA AR +K
Sbjct: 233 RVKLDAAELPEPGTALFAP-----SHGSSIGEVVLA-ARTEK 268
>gi|324115084|gb|EGC09049.1| folate-binding protein YgfZ [Escherichia fergusonii B253]
Length = 326
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|115372192|ref|ZP_01459503.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
gi|115370894|gb|EAU69818.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
Length = 358
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-NIIRKRPM 205
LR+ G+ D + +TI P +A +L + IS KGCYIGQEV++R R ++ RK
Sbjct: 229 LRVEAGVPRYGQDMVDTTI-PLEA--NLTHAISYNKGCYIGQEVIARATFRGHMNRKLTG 285
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234
++ G + P G+ + + ++G L VV
Sbjct: 286 LLLGEAEAEP-GTELRKGEKKVGWLTSVV 313
>gi|325498459|gb|EGC96318.1| global regulator [Escherichia fergusonii ECD227]
Length = 326
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|319779568|ref|YP_004130481.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9]
gi|317109592|gb|ADU92338.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9]
Length = 290
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 26/32 (81%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+D++N IS KGCY+GQEV++R+ +++ ++R
Sbjct: 192 LDIINAISFNKGCYVGQEVIARLHYKSKPKRR 223
>gi|326561940|gb|EGE12275.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 7169]
gi|326570316|gb|EGE20360.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC1]
gi|326573625|gb|EGE23584.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis CO72]
Length = 233
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+
Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
++R+ + + I G +PP+G + I + L G +AL IAR
Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPPTGGNMGRMSI-VNALATDTGFEALVIAR 210
>gi|298345557|ref|YP_003718244.1| glycine cleavage T protein [Mobiluncus curtisii ATCC 43063]
gi|304391113|ref|ZP_07373065.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|298235618|gb|ADI66750.1| glycine cleavage T protein (aminomethyl transferase) [Mobiluncus
curtisii ATCC 43063]
gi|304325996|gb|EFL93242.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 354
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVS 192
N + +D+ + +RI+ + P T+ PH+ +D L +SL KGCY GQE V+
Sbjct: 189 NALMKADLGAWEAVRISLWHPRLGREGKPGTL-PHE--LDWLRVAVSLQKGCYPGQETVA 245
Query: 193 RIQHRNIIRKRPMI--ITGT-DDLPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKV 247
++ +R +R I G+ ++LP GSP+ +D E+G L V + +
Sbjct: 246 KLTNRGRPPRRLTFLDIDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLL 305
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ L V G R S
Sbjct: 306 KRQVNPAEILLVEGTRAAQS 325
>gi|261345600|ref|ZP_05973244.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541]
gi|282566080|gb|EFB71615.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541]
Length = 327
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 100/258 (38%), Gaps = 50/258 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF-LISKIEE 62
+ L N I + G A +LQ +TAD+ TL + +A P+GK+ L +
Sbjct: 23 ISLENWELIHLHGADAEKYLQGQVTADISTLSHAHTL-TAHCDPKGKMWSDLRLFHHLNG 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------------------INGVVLS 103
++I RS D + +L Y + S V E +P N +
Sbjct: 82 YSYIER--RSVSDIQLAELKKYAVFSKVTFEKKPELKLLGVAGQGARQALEAVFNSLPDD 139
Query: 104 WNQ-----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------ELRI 149
NQ E T + + ERF LL KI+ +K H E+
Sbjct: 140 QNQVVVDGETTILHFALPAERF-----LLITNDATALKISDTLKAIHVADSQWLALEIAA 194
Query: 150 NHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
++D P A L L +GIS KGCY GQE+V+R + R ++ +
Sbjct: 195 GFAVIDQENS---GQHLPQAANLQALPHGISFQKGCYTGQEMVARAKFRGANKRAMYWLI 251
Query: 209 GTDDLPPSGSPILTDDIE 226
GT S P++ + +E
Sbjct: 252 GTG----STLPVIGEGVE 265
>gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
Length = 369
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224
A +DL+ + L KGCY GQE V+R+ + +R +++ TD+ P +G+P++ +
Sbjct: 266 AEVDLVGPAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDEPPSAGTPVMREG 325
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G +G V G+ ALA+ + + D A
Sbjct: 326 RAVGFVGTAVHHHELGQIALAVVKRNVPDDA 356
>gi|311743212|ref|ZP_07717019.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
gi|311313280|gb|EFQ83190.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
Length = 318
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 36/272 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L A+ T +L LP +L+PQG+I F + +++
Sbjct: 48 VDLSHRDVVTVAGPDRLTWLHALTTQYLLDLPPGRPTDVLLLSPQGRIEHAF--TGVDDG 105
Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L++ L + S V V L+ +Q E
Sbjct: 106 ATFTVHTEPGAGAPLVEFLDRMRFMSRVE--------VTLATDQWAVIGLPGLAWEVRPR 157
Query: 123 ADVL-LHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNG 177
AD+ L G + + S + LRI G +D + +P + L L +
Sbjct: 158 ADLASLPAVLG--DPVGS--WAWEALRIEAGRPRIGLDTDERAIP------NELGLLGSA 207
Query: 178 ISLTKGCYIGQEVVSRIQ-----HRNIIRKRPMIITGT-DDLPPSGSPIL-TDDIEIGTL 230
+ L KGCY GQE V+R+ R ++R + + G+ D LPP G+ +L +G +
Sbjct: 208 VHLDKGCYRGQETVARVHTLGRPPRRLVR---LHLDGSVDHLPPVGTDLLDPAGTRVGAI 264
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
G L + V + + LT GV
Sbjct: 265 GTSARHHELGPVALGVVKRNVDPTLVLTADGV 296
>gi|82778336|ref|YP_404685.1| putative global regulator [Shigella dysenteriae Sd197]
gi|118577996|sp|Q32BW1|YGFZ_SHIDS RecName: Full=tRNA-modifying protein ygfZ
gi|81242484|gb|ABB63194.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 326
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|288933622|ref|YP_003437681.1| folate-binding protein YgfZ [Klebsiella variicola At-22]
gi|288888351|gb|ADC56669.1| folate-binding protein YgfZ [Klebsiella variicola At-22]
Length = 327
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V
Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++GT S P +D+E+
Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267
>gi|328474112|gb|EGF44917.1| hypothetical protein VP10329_15430 [Vibrio parahaemolyticus 10329]
Length = 322
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246
>gi|28899357|ref|NP_798962.1| hypothetical protein VP2583 [Vibrio parahaemolyticus RIMD 2210633]
gi|260362198|ref|ZP_05775185.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030]
gi|260878954|ref|ZP_05891309.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034]
gi|260897479|ref|ZP_05905975.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466]
gi|260899629|ref|ZP_05908024.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037]
gi|81726929|sp|Q87LM8|YGFZ_VIBPA RecName: Full=tRNA-modifying protein ygfZ
gi|28807593|dbj|BAC60846.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308088017|gb|EFO37712.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466]
gi|308090453|gb|EFO40148.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034]
gi|308108226|gb|EFO45766.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037]
gi|308113962|gb|EFO51502.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030]
Length = 322
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246
>gi|310818801|ref|YP_003951159.1| glycine cleavage system t protein [Stigmatella aurantiaca DW4/3-1]
gi|309391873|gb|ADO69332.1| Glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1]
Length = 333
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPM 205
LR+ G+ D + +TI P +A +L + IS KGCYIGQEV++R R + RK
Sbjct: 204 LRVEAGVPRYGQDMVDTTI-PLEA--NLTHAISYNKGCYIGQEVIARATFRGHMNRKLTG 260
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV 234
++ G + P G+ + + ++G L VV
Sbjct: 261 LLLGEAEAEP-GTELRKGEKKVGWLTSVV 288
>gi|116075586|ref|ZP_01472845.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916]
gi|116066901|gb|EAU72656.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916]
Length = 280
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 44/267 (16%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G FL +A + P + + LT G++ LL + D +L
Sbjct: 16 LLRLTGGGTRQFLHGQTSAAIEQAPEQSLIHTCWLTATGRVRALLEVRLDGEGADVLVLC 75
Query: 69 IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D D+++F R V + +QP L W + + S + + +
Sbjct: 76 GDADAVLEGFDRVIFPADRVKVNAAEPQRRVQRLQPAP-EPLQWQDDVVWPASHPLPDPW 134
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ V +D + + RI+HG+ + + T + + L + +SL
Sbjct: 135 AALPV-------------ADPEQLEQWRISHGLPLSSQELNGET---NPLELGLADWVSL 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVG 235
KGCY+GQE V+++ R+ ++++ T G LP +G + V G
Sbjct: 179 EKGCYLGQETVAKLVSRDGVKQKLRCWTIPQQDGNTPLPQAGDTLH-----------VAG 227
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGV 262
++A I K + +G+AL G
Sbjct: 228 ERAGVITSSQKTGQCL-QGLALVRRGC 253
>gi|89256440|ref|YP_513802.1| hypothetical protein FTL_1115 [Francisella tularensis subsp.
holarctica LVS]
gi|115314875|ref|YP_763598.1| hypothetical protein FTH_1088 [Francisella tularensis subsp.
holarctica OSU18]
gi|169656621|ref|YP_001428607.2| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|254367777|ref|ZP_04983798.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp.
holarctica 257]
gi|254369408|ref|ZP_04985420.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|290953920|ref|ZP_06558541.1| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica URFT1]
gi|295312720|ref|ZP_06803463.1| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica URFT1]
gi|89144271|emb|CAJ79554.1| hypothetical protein FTL_1115 [Francisella tularensis subsp.
holarctica LVS]
gi|115129774|gb|ABI82961.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253588|gb|EBA52682.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp.
holarctica 257]
gi|157122358|gb|EDO66498.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|164551689|gb|ABU61651.2| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica FTNF002-00]
Length = 248
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P N L + + F N + + ++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNNDYALFFTKTG-FLNHDILTKGSLTSE 121
Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179
+ + N K+A+ IN + FLP A +DL N +
Sbjct: 122 MTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|290511312|ref|ZP_06550681.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55]
gi|289776305|gb|EFD84304.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55]
Length = 327
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V
Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++GT S P +D+E+
Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267
>gi|262404784|ref|ZP_06081339.1| glycine cleavage T-protein [Vibrio sp. RC586]
gi|262349816|gb|EEY98954.1| glycine cleavage T-protein [Vibrio sp. RC586]
Length = 323
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++GIS +KGCY GQE V+R ++R I ++ I+ G P S
Sbjct: 204 PQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNITAPFS 253
>gi|153840079|ref|ZP_01992746.1| protein YgfZ [Vibrio parahaemolyticus AQ3810]
gi|149746325|gb|EDM57384.1| protein YgfZ [Vibrio parahaemolyticus AQ3810]
Length = 322
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L GIS TKGCY GQE V+R ++R ++ I+ G
Sbjct: 204 PQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKG 246
>gi|320195017|gb|EFW69646.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli WV_060327]
Length = 326
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|312171240|emb|CBX79499.1| tRNA-modifying protein ygfZ [Erwinia amylovora ATCC BAA-2158]
Length = 328
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 32/244 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--- 57
++ + L + + G I +LQ +T DV LP+ R +A +GK+ +
Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78
Query: 58 ----SKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-- 110
+ IE + + +++ K+ ++ K+ +V++ + N T
Sbjct: 79 AGGMAYIERRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLPD 138
Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIA---------SDIKTYHELRINHG- 152
+S+ + LL T +IA +D + L I G
Sbjct: 139 AESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAGW 198
Query: 153 -IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
I+D T + P A + L+ IS KGCY GQE+V+R + R ++ + G
Sbjct: 199 PIIDAATS---AQFIPQAANLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKA 255
Query: 212 DLPP 215
+ P
Sbjct: 256 GVVP 259
>gi|54297492|ref|YP_123861.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris]
gi|53751277|emb|CAH12688.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris]
Length = 352
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 273
Query: 199 IIRKR-PMIITGTDDLPPSGSPILT--DDIEIGTL 230
++ + +D+ SG + +D E+G L
Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDEDTEVGEL 308
>gi|311278182|ref|YP_003940413.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1]
gi|308747377|gb|ADO47129.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1]
Length = 327
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 50/243 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G+ + +LQ +TADV L A +GK+ + + +E
Sbjct: 24 LDDWALATITGQDSEKYLQGQVTADVAQLTEHQHLLVAHCDAKGKMWSNLRLFRQQEGFA 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL----SWNQEHTFSN--SSFID-- 117
+E RS RD+ + +L Y + S V I P + VL + +N S D
Sbjct: 84 WIE-RRSVRDAQLTELKKYAVFSKVAIA--PNDDRVLLGVAGFQARAALANLFSQLPDRD 140
Query: 118 ------------------ERF----------SIADVLLHRTWGHNEKIASDIKTYHELRI 149
ERF +AD L E ++ + + L I
Sbjct: 141 MPAVTENDSTLLWFEHPAERFLLIVSADAAERVADAL------RGEAQRNNSQQWLALNI 194
Query: 150 NHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
G ++DP + P + L GIS KGCY GQE+V+R + R ++ +
Sbjct: 195 EAGLPVIDPANS---AQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWYL 251
Query: 208 TGT 210
G
Sbjct: 252 AGA 254
>gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
Length = 362
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGV 232
+ + LTKGCY GQE V+R+ + +R +++ G ++LP G P++ +G +G
Sbjct: 241 SAVHLTKGCYRGQETVARVANLGRPPRRLVLLHLDAGDEELPRPGDPVVNGGRPVGRVGT 300
Query: 233 V-----VGKKALAIAR 243
V +G ALA+ +
Sbjct: 301 VTLHHELGAVALALVK 316
>gi|152971844|ref|YP_001336953.1| putative global regulator [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|150956693|gb|ABR78723.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 329
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + L I G+ P D S F P + L GIS KGCY GQE+V+R + R
Sbjct: 189 QQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGAN 246
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEI 227
++ ++GT S P +D+E+
Sbjct: 247 KRALWTLSGT----ASRVPEAGEDLEL 269
>gi|323966700|gb|EGB62132.1| folate-binding protein YgfZ [Escherichia coli M863]
gi|327251662|gb|EGE63348.1| tRNA-modifying protein ygfZ [Escherichia coli STEC_7v]
Length = 326
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|291618735|ref|YP_003521477.1| YgfZ [Pantoea ananatis LMG 20103]
gi|291153765|gb|ADD78349.1| YgfZ [Pantoea ananatis LMG 20103]
Length = 403
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+ P A M L+ IS KGCY GQE+V+R ++R ++ ++G S P
Sbjct: 282 AQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQ----ASHLPAAN 337
Query: 223 DDIEI 227
D +E+
Sbjct: 338 DSLEL 342
>gi|323188703|gb|EFZ73988.1| tRNA-modifying protein ygfZ [Escherichia coli RN587/1]
Length = 326
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|206575880|ref|YP_002236645.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342]
gi|226730801|sp|B5XUE6|YGFZ_KLEP3 RecName: Full=tRNA-modifying protein ygfZ
gi|206564938|gb|ACI06714.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342]
Length = 327
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVV 191
E ++ + + L I G+ P D S F P + L GIS KGCY GQE+V
Sbjct: 178 RGEAQLNNSQQWLALNIEAGL--PVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMV 235
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+R + R ++ ++GT S P +D+E+
Sbjct: 236 ARAKFRGANKRALWTLSGT----ASRVPEAGEDLEL 267
>gi|91212277|ref|YP_542263.1| putative global regulator [Escherichia coli UTI89]
gi|117625129|ref|YP_854117.1| putative global regulator [Escherichia coli APEC O1]
gi|218559891|ref|YP_002392804.1| global regulator [Escherichia coli S88]
gi|218691023|ref|YP_002399235.1| putative global regulator [Escherichia coli ED1a]
gi|237706457|ref|ZP_04536938.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA]
gi|306812199|ref|ZP_07446397.1| putative global regulator [Escherichia coli NC101]
gi|331648645|ref|ZP_08349733.1| tRNA-modifying protein YgfZ [Escherichia coli M605]
gi|331659028|ref|ZP_08359970.1| tRNA-modifying protein YgfZ [Escherichia coli TA206]
gi|118577994|sp|Q1R7D2|YGFZ_ECOUT RecName: Full=tRNA-modifying protein ygfZ
gi|166979584|sp|A1AF88|YGFZ_ECOK1 RecName: Full=tRNA-modifying protein ygfZ
gi|226730792|sp|B7MM85|YGFZ_ECO45 RecName: Full=tRNA-modifying protein ygfZ
gi|254814150|sp|B7MZ51|YGFZ_ECO81 RecName: Full=tRNA-modifying protein ygfZ
gi|91073851|gb|ABE08732.1| 2D-phage unknown protein [Escherichia coli UTI89]
gi|115514253|gb|ABJ02328.1| putative global regulator [Escherichia coli APEC O1]
gi|218366660|emb|CAR04414.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli S88]
gi|218428587|emb|CAR09368.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli ED1a]
gi|222034593|emb|CAP77335.1| tRNA-modifying protein ygfZ [Escherichia coli LF82]
gi|226899497|gb|EEH85756.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA]
gi|294490592|gb|ADE89348.1| tRNA-modifying protein ygfZ [Escherichia coli IHE3034]
gi|305854237|gb|EFM54675.1| putative global regulator [Escherichia coli NC101]
gi|307625529|gb|ADN69833.1| putative global regulator [Escherichia coli UM146]
gi|312947431|gb|ADR28258.1| putative global regulator [Escherichia coli O83:H1 str. NRG 857C]
gi|323951663|gb|EGB47538.1| folate-binding protein YgfZ [Escherichia coli H252]
gi|323957381|gb|EGB53103.1| folate-binding protein YgfZ [Escherichia coli H263]
gi|330908930|gb|EGH37444.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli AA86]
gi|331042392|gb|EGI14534.1| tRNA-modifying protein YgfZ [Escherichia coli M605]
gi|331053610|gb|EGI25639.1| tRNA-modifying protein YgfZ [Escherichia coli TA206]
Length = 326
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|323453978|gb|EGB09849.1| hypothetical protein AURANDRAFT_63050 [Aureococcus anophagefferens]
Length = 307
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 30/135 (22%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-----------DLPP 215
P + +D L ++ KGCY+GQE+ +R + R +R+R M + D LPP
Sbjct: 165 PLNCNLDALRYVAFDKGCYLGQELTARAKFRGEVRRRLMPVALQDAASAVLHNAARALPP 224
Query: 216 S----GSPIL-----------TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKG-MALTV 259
+ +PI+ +G + V G +A+A + K+D A+ + + V
Sbjct: 225 AEPVPDAPIVGALPAAGAKLLAAGKAVGEVVAVDGASTVAVAML-KLDFALSGDILDVDV 283
Query: 260 HGVRVKAS--FPHWY 272
G +KAS P W+
Sbjct: 284 EGTELKASPFVPAWW 298
>gi|218550146|ref|YP_002383937.1| global regulator [Escherichia fergusonii ATCC 35469]
gi|226730800|sp|B7LPB2|YGFZ_ESCF3 RecName: Full=tRNA-modifying protein ygfZ
gi|218357687|emb|CAQ90328.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia fergusonii ATCC 35469]
Length = 326
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|84498436|ref|ZP_00997206.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
gi|84381179|gb|EAP97063.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
Length = 342
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 113/295 (38%), Gaps = 63/295 (21%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V LS++ ++V G + +L +I T + L +++ S +L+P+G I I
Sbjct: 45 LAVVDLSHRGVVRVTGPDRLTWLHSITTQQLTGLAPRVSTESLVLSPKGHIEHDLHIVDD 104
Query: 61 EEDTFILEIDRSKRDSLIDKL--LFYKLRSNV------------IIEIQPINGVVLSW-- 104
E T+I ++ +L+ L + + LR V + + G L+W
Sbjct: 105 GESTWIT-VEPGTSPALVAWLDSMRFMLRVEVSDVTDAYAVLGEPLSAASVEGEPLAWVD 163
Query: 105 --------------NQEHTFSNSSF-------IDERFSIADVLLHRTWGHNEKIASDIKT 143
EH + + D ++ D L W + +
Sbjct: 164 PWPNLVADTAAYGPETEHPGESRRWRELIVPRADLEAAVGDRPLAGIWAAEALRVAAWRP 223
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-K 202
+H + D+L + + H KGCY GQE V+R+ N+ R
Sbjct: 224 RLGFETDHRTIAHEVDWLRTAVHLH-------------KGCYRGQETVARVH--NLGRPP 268
Query: 203 RPMIITGTDD----LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVD 248
R ++ D LP +G+P++ + EIG + V G ALA+ + + D
Sbjct: 269 RRIVFLHLDGSGHLLPEAGAPLVLEGREIGRITSVARHHEDGPIALAVIKRNTPD 323
>gi|27904872|ref|NP_777998.1| hypothetical protein bbp391 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|38372575|sp|Q89AC3|YGFZ_BUCBP RecName: Full=tRNA-modifying protein ygfZ
gi|27904270|gb|AAO27103.1| conserved hypothetical protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 318
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E+ N I+D N + FP ++ LNG+ L KGCY GQE++++I + + +
Sbjct: 189 EIASNFPIIDYNIN---KKFFPQSLNLEKLNGLDLKKGCYYGQEMIAKIHFKKLNKHYLH 245
Query: 206 IITG-TDDLPPSGSPI 220
++G + +P G I
Sbjct: 246 WLSGYSYPIPKIGDNI 261
>gi|260775217|ref|ZP_05884115.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260608918|gb|EEX35080.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 322
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L GIS +KGCY GQE V+R ++R + ++ I+ G
Sbjct: 204 PQALNVQALGGISFSKGCYTGQETVARAKYRGMNKRALQIVKG 246
>gi|323978809|gb|EGB73890.1| folate-binding protein YgfZ [Escherichia coli TW10509]
Length = 326
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAG-----EDLEL 267
>gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
Length = 364
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG
Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRLG 300
Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269
VV G ALA + R D A+ G V V S P
Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344
>gi|12323347|gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana]
Length = 436
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231
L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L
Sbjct: 324 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 380
Query: 232 VVVGKK 237
G K
Sbjct: 381 SYTGGK 386
>gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 364
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ N+ R M++ G+ D P +G P+ +G LG
Sbjct: 243 GAVHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRLG 300
Query: 232 VVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269
VV G ALA + R D A+ G V V S P
Sbjct: 301 TVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLP 344
>gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
gi|119958875|gb|ABM15880.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
Length = 361
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ N+ + M++ G D P +G P+L +G L
Sbjct: 239 VGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGASDRPSTGDPLLAGGRTVGRL 296
Query: 231 GVVV 234
G VV
Sbjct: 297 GTVV 300
>gi|26249314|ref|NP_755354.1| putative global regulator [Escherichia coli CFT073]
gi|81474766|sp|Q8FE70|YGFZ_ECOL6 RecName: Full=tRNA-modifying protein ygfZ
gi|26109722|gb|AAN81927.1|AE016766_15 Unknown protein from 2D-page [Escherichia coli CFT073]
gi|307554875|gb|ADN47650.1| tRNA-modifying protein YgfZ [Escherichia coli ABU 83972]
Length = 326
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G+ LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLPEAG-----EDLEL 267
>gi|331674383|ref|ZP_08375143.1| tRNA-modifying protein YgfZ [Escherichia coli TA280]
gi|331068477|gb|EGI39872.1| tRNA-modifying protein YgfZ [Escherichia coli TA280]
Length = 326
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A++L + G E ++ + + L I G P D S F P
Sbjct: 159 ERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGF--PVIDAANSGQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ ++ G LP +G +D+E+
Sbjct: 215 NLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGNASRLPEAG-----EDLEL 267
>gi|296314110|ref|ZP_06864051.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
gi|296839260|gb|EFH23198.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
Length = 288
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D ++ + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGDLLLI-MAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFS--IAD 124
++ I +L + LR+ V+ EI G L+ + E + N +F ++ S I
Sbjct: 71 DLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPNLAFAAQQDSDGICS 130
Query: 125 VLL----------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
++L + A HE+R + + T A+ +
Sbjct: 131 IVLPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
Length = 369
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224
A +DL+ + L KGCY GQE V+R+ + +R +++ TD P +G+P+ D
Sbjct: 266 AEVDLVGPAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDQPPSAGTPVTRDG 325
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G +G V G+ ALA+ + + D A
Sbjct: 326 RTVGFVGTAVHHHELGQVALAVVKRNVPDDA 356
>gi|328676869|gb|AEB27739.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Francisella cf. novicida Fx1]
Length = 248
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P + L + + F N + + I++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLISE 121
Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179
+ + N K+A+ T E FLP A +DL N +
Sbjct: 122 MTFEQVKKENIFNKLATINATNFE------------KFLP-------AELDLDNVNKVVC 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|283788444|ref|YP_003368309.1| tRNA-modifying protein [Citrobacter rodentium ICC168]
gi|282951898|emb|CBG91616.1| tRNA-modifying protein [Citrobacter rodentium ICC168]
Length = 326
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDA 170
ERF + A+ L + G E ++ + + L I GI P D S F P
Sbjct: 159 ERFLLVTDAATAETLCEKLRGEAE--LNNSQQWLALDIEAGI--PVIDAANSAQFIPQAT 214
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ L GIS KGCY GQE+V+R + R ++ + G S P +D+E+
Sbjct: 215 NIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGK----ASRVPEAGEDLEL 267
>gi|152988054|ref|YP_001350103.1| hypothetical protein PSPA7_4761 [Pseudomonas aeruginosa PA7]
gi|150963212|gb|ABR85237.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 314
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + + PP +
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALAGEDPPEPAT 246
Query: 220 ILTDDIEIGTLGVVV 234
L + ++G VV
Sbjct: 247 GLFSPVHATSVGEVV 261
>gi|79367480|ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana]
gi|145326078|ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana]
gi|186492130|ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana]
gi|51969110|dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana]
gi|332195639|gb|AEE33760.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195640|gb|AEE33761.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195641|gb|AEE33762.1| aminomethyltransferase [Arabidopsis thaliana]
Length = 432
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231
L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L
Sbjct: 320 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 376
Query: 232 VVVGKK 237
G K
Sbjct: 377 SYTGGK 382
>gi|160898827|ref|YP_001564409.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
gi|160364411|gb|ABX36024.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
Length = 315
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ G++ KGCY GQEVV+R Q R +++R + L +D+E T VV
Sbjct: 199 VEGVNFKKGCYPGQEVVARSQFRGTLKRRAYLAHAQQPLATGMEVFTPEDLEQATGTVVQ 258
Query: 235 GKKA 238
A
Sbjct: 259 AAPA 262
>gi|46518443|gb|AAS99703.1| At1g60990 [Arabidopsis thaliana]
Length = 423
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS--GSPILTDDIEIGTLG 231
L N ISL KGCY GQE ++R+ + I++R + G + PS GS I D ++G L
Sbjct: 311 LWNSISLNKGCYKGQETIARLMTYDGIKQR---LCGLNLSAPSEPGSTITVDGKKVGKLT 367
Query: 232 VVVGKK 237
G K
Sbjct: 368 SYTGGK 373
>gi|325204265|gb|ADY99718.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240355]
Length = 287
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 11 VRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 69
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFS---NSSFIDERFSIADVL 126
++ + +L + LR+ + EI G L + E + N +F ++ S
Sbjct: 70 DLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFATQQDSDGICS 129
Query: 127 LHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ G +IA + HE+R + + T A+ +
Sbjct: 130 IALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 181
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 182 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEEAG 239
>gi|222111181|ref|YP_002553445.1| folate-binding protein ygfz [Acidovorax ebreus TPSY]
gi|221730625|gb|ACM33445.1| folate-binding protein YgfZ [Acidovorax ebreus TPSY]
Length = 311
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ G++ KGCY GQEVV+R Q R +++R + + G+ + D +G VV
Sbjct: 205 VGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGDAEQPVGTVV 263
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+A A VD + +A T +RV A+
Sbjct: 264 ---QVATAPTGGVDALVSLQIAATGGALRVGAA 293
>gi|121594085|ref|YP_985981.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
gi|120606165|gb|ABM41905.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
Length = 311
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ G++ KGCY GQEVV+R Q R +++R + + G+ + D +G VV
Sbjct: 205 VGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGDAEQPVGTVV 263
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+A A VD + +A T +RV A+
Sbjct: 264 ---QVAAAPTGGVDALVSLQIAATGGALRVGAA 293
>gi|254374202|ref|ZP_04989684.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571922|gb|EDN37576.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 248
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P + L + + F N + + I++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTK-TGFLNHDILTKGSLISE 121
Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179
+ + N K+A+ IN + FLP A +DL N +
Sbjct: 122 MTFEQVKKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|206603597|gb|EDZ40077.1| Putative aminomethyltransferase [Leptospirillum sp. Group II '5-way
CG']
Length = 334
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 45/233 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ FLQ I + D+L K S L P+ +IL E D L
Sbjct: 27 IFIEGEDRKTFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFE-DKIGLFPPA 85
Query: 72 SKRDSLID---KLLFYKLRSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDER 119
R+ I+ K LF++ ++ + I + P VL ++ FS SSF +
Sbjct: 86 GTREEFINHLKKYLFFRTKAKITDMSEHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145
Query: 120 FSIADVLLHRT-WGHN-------------EKIASDIKTYHELRINHG------------I 153
+ VL+H T + HN ++ + K+ + G +
Sbjct: 146 -NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSKKGGVLLSESSYLTYL 204
Query: 154 VDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ PS + FP +A +D + G+S KGCY+GQE V+R++ + + +
Sbjct: 205 TEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNR 256
>gi|330808065|ref|YP_004352527.1| hypothetical protein PSEBR_a1335 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376173|gb|AEA67523.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 129 RTWGHNEKIASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
RT E +D+ + ++R G V P T L P + + G+S KGCY
Sbjct: 157 RTRLGTELAEADLNPWLLGQVRAGIGQVMPATREL---FIPQMLNLQAIGGVSFKKGCYT 213
Query: 187 GQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT 222
GQE+V+R+Q+ +++R + +LP G+ + +
Sbjct: 214 GQEIVARMQYLGKLKRRLYRLQLDASELPEPGTALFS 250
>gi|332184093|gb|AEE26347.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Francisella cf. novicida 3523]
Length = 248
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62
+N ++V G FLQ + TAD+ L + +LT +G+I+ + I
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDNDILLTAFANLKGRIISLCFVKFISN 62
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120
+ +L +++ D L+ L Y + S V + N ++ F+ + F++
Sbjct: 63 EKLLLSVEQEVFDDLLAWLKKYGMFSKV----------SFNSNDDYALFFTKTGFLNHDV 112
Query: 121 SIADVLLHR---TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D L E I + + T IN + FLP+ + L +L
Sbjct: 113 LTKDSLTSEMTFEQVQKENIFNKLAT-----INAANFEK---FLPAEL----DLDNLDKV 160
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|37527429|ref|NP_930773.1| putative global regulator [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81418630|sp|Q7N1C0|YGFZ_PHOLL RecName: Full=tRNA-modifying protein ygfZ
gi|36786864|emb|CAE15929.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 329
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+T F+P L L G+ KGCY GQE+V+R ++R ++ + G+ S
Sbjct: 205 STQFIPQAT----NLQALAGGVCFKKGCYTGQEMVARAKYRGANKRGMYWLAGS----AS 256
Query: 217 GSPILTDDIE 226
P+ DD+E
Sbjct: 257 KIPMAGDDLE 266
>gi|208779174|ref|ZP_03246520.1| hypothetical protein FTG_1468 [Francisella novicida FTG]
gi|208744974|gb|EDZ91272.1| hypothetical protein FTG_1468 [Francisella novicida FTG]
Length = 248
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----QGKILLYFLISKIEE 62
+N ++V G FLQ + TAD+ L + +LT +G+I+ + I
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLS---SDNDILLTAFANLKGRIISLCFVKFISN 62
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ +L +++ ++L+ L Y + S V P + L + + F N + + I
Sbjct: 63 EKLLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLI 119
Query: 123 ADVLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG--- 177
+++ + N K+A+ IN + FLP A +DL N
Sbjct: 120 SEMTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKV 160
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 161 VCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|238754568|ref|ZP_04615922.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473]
gi|238707199|gb|EEP99562.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473]
Length = 311
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 146 ELRINHGIVD-PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
E+ ++D PN+ + P + L GI TKGCY GQE+V+R ++R ++
Sbjct: 175 EIEAGFPVIDSPNS----AQFIPQATNIQALAGICFTKGCYTGQEMVARAKYRGANKRAL 230
Query: 205 MIITG-TDDLPPSGSPI 220
+ G + +P +G +
Sbjct: 231 YWLAGQAERVPEAGEDL 247
>gi|296104560|ref|YP_003614706.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059019|gb|ADF63757.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 326
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 37/250 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G A +LQ +TADV + +A P+GK+ + +
Sbjct: 19 LTLISLDDWALATLVGADAEKYLQGQVTADVSQMTEHQHLLAAHCDPKGKMWSNLRLFR- 77
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------IQPINGVVLSWNQEHTFSN-- 112
+D F RS RD + +L Y + S V I + + G ++ F+
Sbjct: 78 RQDGFAFIERRSLRDDQLKELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFNELP 137
Query: 113 -----------SSFI-----DERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+S + ERF + A+ + G E ++ + + L I
Sbjct: 138 DAEKQLVSEGETSILWFEHPAERFLLVTDAATAERVTEALRG--EAQFNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ P D S F P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGL--PVIDAANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAG 253
Query: 210 -TDDLPPSGS 218
+P +G
Sbjct: 254 HASRVPEAGE 263
>gi|145589151|ref|YP_001155748.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047557|gb|ABP34184.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 336
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 59/243 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK----IARGS------AILTPQGKILL-- 53
L I V G A FLQ+ ++ +L + IA+ S +P+G+++
Sbjct: 22 LPQWGMIFVEGPDATSFLQSQLSNSLLGMKRTHDPDIAKSSDSVRLVGYCSPKGRLISSA 81
Query: 54 ---YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHT 109
F S+ +D ++L I + + +L Y LRS V +I++ WN
Sbjct: 82 WIGLFPTSESSDDRYVLFISKDIAATTAKRLAMYVLRSKVKVIDMSS------EWNVSGF 135
Query: 110 F-------------SNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144
F S + E R+ IA + +T I +
Sbjct: 136 FDAAIHDGCEHLKTSQDCLVAEIPNVLVQGLTYTRYLIAKLGNEKT---EPPFEGGIDAW 192
Query: 145 HELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
++L + I + F+P I + + G+ KGCY GQE+V+R Q+R I
Sbjct: 193 NDLEVLSAIPRIVLATQEQFVPQMIN-----FESVAGVDFKKGCYPGQEIVARSQYRGAI 247
Query: 201 RKR 203
++R
Sbjct: 248 KRR 250
>gi|261211566|ref|ZP_05925854.1| glycine cleavage T-protein [Vibrio sp. RC341]
gi|260839521|gb|EEX66147.1| glycine cleavage T-protein [Vibrio sp. RC341]
Length = 323
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + ++GIS +KGCY GQE V+R ++R I ++ I+ G
Sbjct: 204 PQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGN 247
>gi|300722120|ref|YP_003711402.1| hypothetical protein XNC1_1126 [Xenorhabdus nematophila ATCC 19061]
gi|297628619|emb|CBJ89197.1| putative enzyme [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--LMDLLNGISLTKGCYIGQEVVSRIQH 196
+D + + L I G P D S F A L + N IS KGCY GQE+V+R +
Sbjct: 187 NDSQQWLALEIEAGF--PVIDAAGSAQFIPQATNLQAIENSISFKKGCYAGQEMVARAKF 244
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
R ++ + G S P+ DD+E
Sbjct: 245 RGANKRAMYWLAGQ----ASSLPVAGDDLE 270
>gi|71279144|ref|YP_270787.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H]
gi|118577992|sp|Q47WN5|YGFZ_COLP3 RecName: Full=tRNA-modifying protein ygfZ
gi|71144884|gb|AAZ25357.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H]
Length = 324
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
P + +NGIS TKGCY+GQE V+R+Q+
Sbjct: 208 PQMLNLQAINGISFTKGCYLGQETVARMQY 237
>gi|330957818|gb|EGH58078.1| hypothetical protein PMA4326_04469 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 293
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 146 ELRINHGIVDPNT--DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++R G V +T +F+P I + + G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 156 QIRAGIGQVFGSTREEFIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGKLKRR 210
Query: 204 PMIIT-GTDDLPPSGSPILT 222
+T ++P G+ + +
Sbjct: 211 LYRLTLQAQEIPQPGTALFS 230
>gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
gilvum PYR-GCK]
gi|315442670|ref|YP_004075549.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1]
gi|145214716|gb|ABP44120.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
gilvum PYR-GCK]
gi|315260973|gb|ADT97714.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1]
Length = 367
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ N+ + M++ G D P G P+L +G L
Sbjct: 242 VGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLVHLDGDGDRPSPGDPLLAGGRAVGRL 299
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHG-VRVKASF 268
G VV + + V + ALT G V+V A+
Sbjct: 300 GTVVDHVDEGVIALALVKRGLPVDTALTTGGEVQVAAAI 338
>gi|148657807|ref|YP_001278012.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
sp. RS-1]
gi|148569917|gb|ABQ92062.1| aminomethyltransferase [Roseiflexus sp. RS-1]
Length = 324
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LL+ +S +KGCY+GQE+++R++ R + KR
Sbjct: 223 LLDAVSFSKGCYVGQEIIARMESRGRLAKR 252
>gi|47168424|pdb|1NRK|A Chain A, Ygfz Protein
Length = 328
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDI 225
P + L GIS KGCY GQE V+R + R ++ ++ G+ LP +G +D+
Sbjct: 214 PQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGSASRLPEAG-----EDL 268
Query: 226 EI 227
E+
Sbjct: 269 EL 270
>gi|71907821|ref|YP_285408.1| glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
gi|71847442|gb|AAZ46938.1| Glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
Length = 339
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L++ I+ G+ A FL + T+D+ LP +A+ + T +G++ FL+ + +E
Sbjct: 43 VPLTHLGLIEATGEDAKAFLHSQFTSDINHLPENLAQHAGWCTAKGRMQASFLVWRHDE- 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV 90
++L + +++ +LL + LRS V
Sbjct: 102 RYLLALSADLQEATQKRLLMFVLRSKV 128
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
P A + + G+S KGCY GQEVV+R Q+ +++
Sbjct: 231 PQMADFEKIGGVSFHKGCYPGQEVVARTQYLGKVKR 266
>gi|52696236|pdb|1VLY|A Chain A, Crystal Structure Of A Putative Aminomethyltransferase
(Ygfz) From Escherichia Coli At 1.30 A Resolution
Length = 338
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDI 225
P + L GIS KGCY GQE V+R + R ++ ++ G+ LP +G +D+
Sbjct: 223 PQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGSASRLPEAG-----EDL 277
Query: 226 EI 227
E+
Sbjct: 278 EL 279
>gi|120555181|ref|YP_959532.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter
aquaeolei VT8]
gi|120325030|gb|ABM19345.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter
aquaeolei VT8]
Length = 326
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 109/279 (39%), Gaps = 43/279 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L+++ ++ G F+Q + +V + + +A TP+G+ + + ED
Sbjct: 18 AHLTDRVLARISGPGTDKFVQGQFSQNVDEVTSGQSLRAAACTPKGRAYCITRLVRDGED 77
Query: 64 TFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+L ++R + + L + ++ S +++ I G++ E + +
Sbjct: 78 -LLLSLERETAEDTVKHLNKYLMLFRGTSLGVLDSGRITGLL---GIETARQVAGAATDE 133
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST--------------- 164
+ +L G+ ++ D + H R D D LPS+
Sbjct: 134 LTRPGQVLSTDNGYLIRVEDD--SDHCARFELWQTDAQPDLLPSSELSLQTWLASEVRAG 191
Query: 165 -----------IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
P + L GI KGCY GQEV++R+ ++K + GT+
Sbjct: 192 VPWLTAATREAYVPQMLNLQHLQGIHFKKGCYTGQEVIARMHFLGQLKKSLFRVAFNGTE 251
Query: 212 DLPPSGSPILTDDIEIGTL--GVVVGKKA---LAIARID 245
P G+ ++ D +G + V+ G++ LA+ R D
Sbjct: 252 AAPQPGTRLIADGSAVGEVVNSVLTGEQQGEMLAVIRHD 290
>gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare ATCC 13950]
Length = 364
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233
+ L KGCY GQE V+R+ N+ R M++ G+ + P +G P+L +G LG V
Sbjct: 245 VHLDKGCYRGQETVARVH--NLGRPPRMLVLLHLDGSVERPSTGDPVLAGGRAVGRLGTV 302
Query: 234 V 234
V
Sbjct: 303 V 303
>gi|294634850|ref|ZP_06713372.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685]
gi|291091723|gb|EFE24284.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685]
Length = 344
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 139 SDIKTYHELRINHGIV---DPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
SD + L I G+ + ++D FLP I + L GI KGCY GQE+V+R
Sbjct: 199 SDGAQWLALDIEAGLAIIDEASSDQFLPQAIN-----LQALGGICFNKGCYSGQEMVARA 253
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ R R+ + G+ P S +D+E+
Sbjct: 254 KFRGANRRALFWLRGSAGRLPHAS----EDLEL 282
>gi|312881728|ref|ZP_07741505.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370618|gb|EFP98093.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 322
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
P + L+GIS TKGCY GQE V+R ++R ++ ++ G
Sbjct: 204 PQALNLHALDGISFTKGCYTGQETVARAKYRGTNKRSLALLHG 246
>gi|52841809|ref|YP_095608.1| glycine cleavage T protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628920|gb|AAU27661.1| glycine cleavage T protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 352
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTTY-----VSFDKGCYKGQEIIARTHYRA 273
Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230
++ + +D+ SG + D E+G L
Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDENTEVGEL 308
>gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
Length = 341
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGV 232
+ L KGCY GQE VSR+ + + + P ++ G+ LP +G P++ +G +G
Sbjct: 227 VHLDKGCYRGQETVSRVHN---VGRSPRVLVMLQLDGSATLPETGDPVMMGKRAVGRVGT 283
Query: 233 VV-----GKKALAI 241
VV G ALA+
Sbjct: 284 VVQHADYGPIALAL 297
>gi|54294377|ref|YP_126792.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens]
gi|53754209|emb|CAH15686.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens]
Length = 352
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTTY-----VSFDKGCYKGQEIIARTHYRA 273
Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230
++ + +D+ SG + D E+G L
Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKSDENTEVGEL 308
>gi|225874893|ref|YP_002756352.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
gi|225791236|gb|ACO31326.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
Length = 371
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ DF P + +D + KGCY+GQE+V RI+ R + ++ +
Sbjct: 222 LRLLEGVPQYGVDF-SEKYLPQE--VDGSRPLHFNKGCYLGQEIVERIRSRATVHRQLRV 278
Query: 207 ITGTDDLPPSGSPILTDDIE-IGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+ T LP +P+ + + IG + G + L +A + + A+++ LT G
Sbjct: 279 VELTGTLPALPAPVEVGEAQAIGEITSAAALPGGPRLLGLAMLR--NEAMERQQTLTYEG 336
>gi|154283223|ref|XP_001542407.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410587|gb|EDN05975.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 162
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ GI KGCY GQE+ R HR ++RKR
Sbjct: 1 MGGIDFHKGCYTGQELTIRTHHRGVVRKR 29
>gi|315127408|ref|YP_004069411.1| one-carbon metabolism transcriptional regulator [Pseudoalteromonas
sp. SM9913]
gi|315015922|gb|ADT69260.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas sp. SM9913]
Length = 303
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P + +NGIS KGCY GQE V+R+++ ++ I+TG +
Sbjct: 186 PQMVNLQAINGISFKKGCYTGQETVARMKYLGKNKRAMYIVTGQSE 231
>gi|224044546|ref|XP_002192842.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 212
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA-------ILTPQGKIL-- 52
++ + ++ + V G A FLQ ++T DV L +A G A L QG+ L
Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRL---LAEGDAPRALYAHALNAQGRCLYD 79
Query: 53 --LYFL-ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP 96
LY L S EE +LE D S DS+ L YK+R V I P
Sbjct: 80 VILYRLHRSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCP 126
>gi|319410530|emb|CBY90895.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594]
Length = 288
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G+ FL ++ D+ L A + TP+G+++ ++ D +L + +
Sbjct: 12 VRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD-LLLIMAQ 70
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFS---NSSFIDERFSIADVL 126
++ + +L + LR+ V+ EI V L + E + N +F ++ S
Sbjct: 71 DLLEATVKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPNLAFAAQQDSDGICS 130
Query: 127 LHRTWGHNEKIASDIK------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ G +IA + HE+R + + T A+ +
Sbjct: 131 IALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYPWICAATK--------ETAVAQM 182
Query: 175 LN-----GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
LN G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 183 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 240
>gi|146306495|ref|YP_001186960.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp]
gi|145574696|gb|ABP84228.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp]
Length = 313
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 44/279 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + V G A FLQ +T ++ L A TP+G++L F I +E D +
Sbjct: 10 LDHEGLLAVRGPDAGKFLQGQLTCNLSYLSASQTSLGARCTPKGRMLSSFRIVPVE-DGY 68
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------QEHTFSNSSFIDER 119
+L + R + + L Y + S + + V + E D
Sbjct: 69 LLAMARELIEPQLADLQKYAVFSKSKLGDESAAWVRFGLSGGDAVLSELGLVPGDHADAL 128
Query: 120 FSIADVLLHRTW-GHNEKIASDIKTYH--------------------ELRINHGIVDPNT 158
S +L R G E A+ K H ++R G V T
Sbjct: 129 ASAEGLLAVRLGDGRVELWAAVDKAEHLHAVLSRHLPQAPLNLWLLAQVRAGVGQVFGAT 188
Query: 159 D--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDLPP 215
F+P I + L G+S KGCY GQE+V+R+Q+ + R+ + G ++P
Sbjct: 189 RELFIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLRLGGTEVPS 243
Query: 216 SGSPILTDDIEIGTLGVVV-------GKKALAIARIDKV 247
+G+ + + + ++G VV G + LA+ + D V
Sbjct: 244 AGTELFS-PVHASSVGEVVLAAQAEDGVELLAVLQEDAV 281
>gi|251771531|gb|EES52108.1| putative aminomethyltransferase [Leptospirillum ferrodiazotrophum]
Length = 339
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 84/238 (35%), Gaps = 48/238 (20%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G FLQ ++ DV R L+P+ +IL I + + +
Sbjct: 25 LVSVSGDDRASFLQGLLCQDVAGQKTGTLRYGFFLSPKARILFDSWIGVLPDRILLSPSL 84
Query: 71 RSKRD-----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
SK D + + K LF++ ++ + E L + + F E
Sbjct: 85 FSKEDEEAFLAHLKKYLFFRTKATLSSETGAFISASLVGPEALALATPLFDPEAEEEGVR 144
Query: 119 RFSIADVLLHRT---------------WGHNEKIASDIKTYHE----------------- 146
R S R W EK +K E
Sbjct: 145 RLSEGGFAFLRPGIGAFDADTGGWIDLWLPAEKAGDRLKGLEERVLSRGGQRLDDTGIEV 204
Query: 147 LRINHGIVDPNTDF-LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R+ GI P F L + FP +A +D L +S KGCY+GQE V+R++ + + ++
Sbjct: 205 YRVERGI--PAVPFELNESHFPAEAGLDTL-AVSYNKGCYVGQEPVTRLKFQGQLSRK 259
>gi|56478511|ref|YP_160100.1| putative glycine cleavage T-protein (aminomethyl transferase)
[Aromatoleum aromaticum EbN1]
gi|56314554|emb|CAI09199.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Aromatoleum aromaticum EbN1]
Length = 351
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---IITGTDDLP 214
+++ G+S KGCY GQE+V+R Q+ ++KR I G + LP
Sbjct: 243 EIIGGVSFQKGCYPGQEIVARTQYLGKLKKRMYRVRIADGAEPLP 287
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N I+ G+ + PFL + + DV L + A+ ++ +P+G++L L+ K E D
Sbjct: 48 VPLVNLGIIRSRGEDSAPFLHNLFSNDVKNLSAEGAQWTSFNSPKGRMLASILLWK-EAD 106
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV 90
L + +L+ KL Y LRS V
Sbjct: 107 GHALVMSADLLPALLKKLSMYVLRSKV 133
>gi|21672687|ref|NP_660754.1| hypothetical protein BUsg420 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091589|sp|Q8K9C6|YGFZ_BUCAP RecName: Full=tRNA-modifying protein ygfZ
gi|21623327|gb|AAM67965.1| unknown protein from 2d-page (spot pr51) [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
Length = 319
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 153 IVDPNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
I+D T FLP +I + LL +S KGCY GQE ++R+ ++N+ + +++
Sbjct: 200 IIDKQTSQKFLPQSI-----NLILLQAVSFDKGCYYGQETIARVFYKNLNKYSLYLLSSK 254
Query: 211 DDLPPSGSPIL 221
++ P I+
Sbjct: 255 GNINPKIGSII 265
>gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M]
gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 363
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTL 230
+ + L KGCY GQE V+R+ N+ + M++ G+ D P +G +L +G +
Sbjct: 241 IGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLLHLDGSTDRPSTGDSVLAGGRSVGRV 298
Query: 231 GVVV-----GKKALA-IARIDKVDHAIKKGMALTVHGVRVKASFP 269
G VV G ALA + R D A+ G T+ + S P
Sbjct: 299 GTVVDHVDLGPVALALVKRGLPADTALMTGAEATIPALIDAQSLP 343
>gi|307610278|emb|CBW99842.1| hypothetical protein LPW_16031 [Legionella pneumophila 130b]
Length = 352
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 143 TYHELRINHGIVD--PNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T+H LR+ + +D PN+ FLP I H +S KGCY GQE+++R +R
Sbjct: 219 TWHTLRLFNNQIDIYPNSRGLFLPHRIGLHQTAY-----VSFDKGCYKGQEIIARTHYRA 273
Query: 199 IIRKR-PMIITGTDDLPPSGSPILTDD--IEIGTL 230
++ + +D+ SG + D E+G L
Sbjct: 274 TLKHELKKFVIQSDNQLYSGQKLFKADENTEVGEL 308
>gi|296390892|ref|ZP_06880367.1| hypothetical protein PaerPAb_22175 [Pseudomonas aeruginosa PAb1]
Length = 314
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|153870446|ref|ZP_01999846.1| Glycine cleavage T protein [Beggiatoa sp. PS]
gi|152073082|gb|EDN70148.1| Glycine cleavage T protein [Beggiatoa sp. PS]
Length = 123
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ G+S KGCY GQE+V+R+Q+ +++R + + PP
Sbjct: 18 IGGVSFKKGCYTGQEIVARMQYLGTLKRRMYLARINTNTPPQ 59
>gi|71064739|ref|YP_263466.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4]
gi|71037724|gb|AAZ18032.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4]
Length = 255
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLIS 58
+++V L+ S + + G+ A FLQ +T +V L L Y+ A AI +G+I I
Sbjct: 5 INAVTLAQFSQLSIQGEDAEKFLQGQLTCNVTKLGLSYQAA---AIGNLKGRIEFGIWIK 61
Query: 59 KIEEDTFILEIDRSKRDSLIDKL----LFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNS 113
K E + + I ++L L F K ++ + I P + V +++ + ++ S
Sbjct: 62 KQAEKHYDVVISTDCAEALQGHLKKFGAFSKFDTSTPMPIYPCVIDNVPTFSHQDDYNTS 121
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT-DFLPSTIFPHDALM 172
I + W + S I T N+ IV +F P + H
Sbjct: 122 ENI------------QAW-----MQSSIATG-----NYWIVAATQGEFQPQELRLHQ--- 156
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRK-----RPMIITGTDDLPPSGSPILTDDIE- 226
G+ KGCY+GQEV++RI ++ + + + G+ P +G + D ++
Sbjct: 157 --RGGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPAAGEKL--DKVQV 212
Query: 227 IGTLGVVVGKKALAIARIDKV 247
+ + G +AL +AR +++
Sbjct: 213 VNAITTSEGFEALVVARPEQL 233
>gi|254239121|ref|ZP_04932444.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254245013|ref|ZP_04938335.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|126171052|gb|EAZ56563.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198391|gb|EAZ62454.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 314
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|15595956|ref|NP_249450.1| hypothetical protein PA0759 [Pseudomonas aeruginosa PAO1]
gi|9946647|gb|AAG04148.1|AE004511_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 314
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|219117237|ref|XP_002179413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409304|gb|EEC49236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 657
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMII 207
L +S KGCY+GQE+ +R+ H +RKR P+++
Sbjct: 269 LQAVSFHKGCYLGQELTARVHHTGAVRKRILPLLL 303
>gi|107100219|ref|ZP_01364137.1| hypothetical protein PaerPA_01001242 [Pseudomonas aeruginosa PACS2]
Length = 314
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_29246 [Mycobacterium kansasii ATCC
12478]
Length = 363
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 51/283 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I + GK +L +I T V LP + + L QG++ +++ +++ + T+
Sbjct: 39 SHRAVITLTGKDRQTWLHSISTQHVSDLPEGASTENLSLDGQGRVEDHWIQTELADTTY- 97
Query: 67 LEIDRSKRDSLID---KLLFY------------------KLRSNVIIEIQPINGVVLSWN 105
L+ + + + L+ K++F+ +L ++++ ++ + S
Sbjct: 98 LDTEPWRGEPLLSYLRKMVFWAAVTPEAADLAVLSLLGPRLADRAVLDVVGLD-ALPSEM 156
Query: 106 QEHTFSNSSFIDERFSIA-----DVLLHRT----WGHNEKIA----SDIKTYHELRINHG 152
+ F+ + A D+L+ R W H A + + TY R+
Sbjct: 157 AAVPLAGGGFVRRMPAPAGQIELDLLVPREDCADWQHRLTQAGVRPAGVWTYEAHRVAAR 216
Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-- 207
D TI PH+ L + L KGCY GQE V+R+ N+ + M++
Sbjct: 217 RPRLGVDTDERTI-PHEVGWIGGPGLGAVHLDKGCYRGQETVARVH--NLGKPPRMLVLL 273
Query: 208 --TGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
G+ D P +G ++ +G +G VV G ALA+ +
Sbjct: 274 HLDGSGDRPSTGDAVMAGGRAVGRVGTVVEHVDLGPVALALVK 316
>gi|218893298|ref|YP_002442167.1| hypothetical protein PLES_45841 [Pseudomonas aeruginosa LESB58]
gi|218773526|emb|CAW29338.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 314
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGS 218
F+P I + + G+S KGCY GQE+V+R+Q+ +++R + D++P G+
Sbjct: 192 FIPQMIN-----LQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPGT 246
Query: 219 PILT 222
+ +
Sbjct: 247 GLFS 250
>gi|146281603|ref|YP_001171756.1| aminomethyltransferase [Pseudomonas stutzeri A1501]
gi|145569808|gb|ABP78914.1| predicted aminomethyltransferase [Pseudomonas stutzeri A1501]
Length = 261
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I + L G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 138 FIPQMIN-----LQALGGVSFKKGCYTGQEIVARMQYLGKLKRR 176
>gi|299115744|emb|CBN74309.1| folate-binding protein YgfZ [Ectocarpus siliculosus]
Length = 544
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+A+ + + LRI G P + L + P +A L + + KGCYIGQE +SR+
Sbjct: 342 VAAGEEEWQTLRIKQGFPFPGKE-LTADYNPLEA--GLWHAVHFDKGCYIGQESISRVNA 398
Query: 197 RNIIRKRPMIITGTDDLPP 215
N + K ++ D P
Sbjct: 399 YNAVSKALYGVSFEDSTSP 417
>gi|262183527|ref|ZP_06042948.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 318
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 38/275 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF
Sbjct: 16 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 74
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
L++ ++ +SL D L S V +E + V+ Q +++ ++
Sbjct: 75 LDVPTAQFESLRDFLTAMVFWSQVTVE-EADAAVITVLGQPLQKPSAALVERSVQWPGCP 133
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINH----GIVDPNT--DFLPSTI 165
+ F + L EK + T +R G +D T +P I
Sbjct: 134 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDLDEKTIAHEVPQWI 193
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPI 220
+D D+ + L KGCY GQE V+R++ N+ R +++ + P SG+ I
Sbjct: 194 RRND---DVPAFVHLEKGCYRGQETVARVE--NLGRSPRLLVMLYLDGSAPERPDSGADI 248
Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G LG VV G AL + + ++H
Sbjct: 249 TLGGRRVGRLGTVVEDCDYGPIALGLIKRSALNHG 283
>gi|326563032|gb|EGE13306.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 103P14B1]
gi|326577301|gb|EGE27189.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 101P30B1]
Length = 233
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P + + G++ KGCY+GQE+++R+ + + I G +PP+G +
Sbjct: 135 PQELRLHQKGGVAYDKGCYLGQEIIARLYFKARPKAYLHRILGVGAIPPTGG-------D 187
Query: 227 IGTLGVV------VGKKALAIAR 243
+G + VV G +AL IAR
Sbjct: 188 MGRMSVVNAIATDTGFEALVIAR 210
>gi|134302296|ref|YP_001122265.1| putative aminomethyl transferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050073|gb|ABO47144.1| putative aminomethyl transferase [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 248
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P + L + + F N + + ++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121
Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179
+ + N K+A+ IN + FLP A +DL N +
Sbjct: 122 MTFEQVQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|227833984|ref|YP_002835691.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|227455000|gb|ACP33753.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 353
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 38/275 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF
Sbjct: 51 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
L++ ++ +SL D L S V +E + V+ Q +++ ++
Sbjct: 110 LDVPTAQFESLRDFLTAMVFWSQVTVE-EADAAVITVLGQPLQKPSAALVERSVQWPGCP 168
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINH----GIVDPNT--DFLPSTI 165
+ F + L EK + T +R G +D T +P I
Sbjct: 169 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDLDEKTIAHEVPQWI 228
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPI 220
+D D+ + L KGCY GQE V+R++ N+ R +++ + P SG+ I
Sbjct: 229 RRND---DVPAFVHLEKGCYRGQETVARVE--NLGRSPRLLVMLYLDGSAPERPDSGADI 283
Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G LG VV G AL + + ++H
Sbjct: 284 TLGGRRVGRLGTVVEDCDYGPIALGLIKRSALNHG 318
>gi|76800870|ref|YP_325878.1| aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
gi|76556735|emb|CAI48309.1| homolog to aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
Length = 360
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ L N + KGCY+GQEVVS+I+++ R ++ D P +G+ + D +G +
Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSKIENQG-RPSRELVGIKLDAEPTAGAAVFDGDSHVGEV 302
>gi|113478071|ref|YP_724132.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
gi|110169119|gb|ABG53659.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
Length = 349
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P+ + L P +A L N IS KGCYIGQE ++R+ ++
Sbjct: 216 RLWQQLRIEQGRPAPDYE-LTDDYNPLEA--GLWNTISFEKGCYIGQETIARLNTYKGVK 272
Query: 202 KR 203
+R
Sbjct: 273 QR 274
>gi|297837379|ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ +LRI G P + ++ L L N ISL KGCY GQE ++R+ + I+
Sbjct: 283 AWEKLRITQGRPAPERELSKE----YNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIK 338
Query: 202 KRPMIITGTDDLPPS--GSPILTDDIEIGTL 230
+ + G + P+ GSPI+ D ++G L
Sbjct: 339 Q---WLCGLNLSAPAEPGSPIIVDGKKVGKL 366
>gi|221135433|ref|ZP_03561736.1| glycine cleavage T protein (aminomethyl transferase) [Glaciecola
sp. HTCC2999]
Length = 296
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 11/202 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L + IK+ G + ++Q +T ++ TL + A +GK+ +F S +D
Sbjct: 10 AHLPHLGIIKITGTDKVKYIQGQVTCNIETLNSERWTFGAHCDFKGKMWSFFQAS-FWDD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L + S + +L Y + S V I++ S + + + DE+ +
Sbjct: 69 ALLLICPKDVIPSALSELKKYGVFSQVEIVDASNEFSFTGSGSDAGEYGQVTCTDEQLVL 128
Query: 123 A------DVLLH--RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ LH R N + + L I GI T + P +
Sbjct: 129 SMSNQTITRALHVSRDSSANSDLPDGSAVWQALDIQSGI-GAITSSTSNEYVPQILNLQA 187
Query: 175 LNGISLTKGCYIGQEVVSRIQH 196
L+ I KGCY+GQEVV+R ++
Sbjct: 188 LDAIDFKKGCYMGQEVVARTKY 209
>gi|315503573|ref|YP_004082460.1| folate-binding protein ygfz [Micromonospora sp. L5]
gi|315410192|gb|ADU08309.1| folate-binding protein YgfZ [Micromonospora sp. L5]
Length = 369
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233
+ L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G
Sbjct: 275 VHLDKGCYRGQETVARVHNLGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTA 334
Query: 234 V-----GKKALAIARIDKVDHA 250
V G+ ALA+ + + D A
Sbjct: 335 VQHYELGQVALAVLKRNTPDDA 356
>gi|302870150|ref|YP_003838787.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
gi|302573009|gb|ADL49211.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
Length = 369
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233
+ L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G
Sbjct: 275 VHLDKGCYRGQETVARVHNLGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTA 334
Query: 234 V-----GKKALAIARIDKVDHA 250
V G+ ALA+ + + D A
Sbjct: 335 VQHYELGQVALAVLKRNTPDDA 356
>gi|332711903|ref|ZP_08431833.1| folate-binding protein YgfZ [Lyngbya majuscula 3L]
gi|332349231|gb|EGJ28841.1| folate-binding protein YgfZ [Lyngbya majuscula 3L]
Length = 355
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P + L P +A L IS +KGCYIGQE ++R+ ++
Sbjct: 219 RVWEQLRIQQGRPAPGHE-LTEDYNPLEA--GLWQSISFSKGCYIGQETIARLNTYKGVK 275
Query: 202 KR--PMIITGTDDLPPSGSPILTDDIEIGTL 230
+R + ++ DL GS I D ++G L
Sbjct: 276 QRLWGIRLSAPTDL---GSVITVDGEKVGKL 303
>gi|325928378|ref|ZP_08189573.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118]
gi|325541254|gb|EGD12801.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118]
Length = 273
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 169 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRVLQLLETDAAVDAGDAVALDGSA 227
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--HGVRVKA 266
IGT+ V G ALA+ ++ + G AL HG R +A
Sbjct: 228 IGTVVSVAGNLALAVLPLELT---LDAGTALQAGTHGARPRA 266
>gi|284166725|ref|YP_003405004.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
gi|284016380|gb|ADB62331.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
Length = 375
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-------GTDDLPPSGSPILTD 223
++ L N + KGCY+GQEVVSR+++R ++ + +T G DD G+P + D
Sbjct: 244 VLGLRNALDWEKGCYVGQEVVSRVENRGQPSRKLVGLTLEGAASDGEDD--EDGAPAVPD 301
>gi|56708171|ref|YP_170067.1| hypothetical protein FTT_1088c [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670642|ref|YP_667199.1| hypothetical protein FTF1088c [Francisella tularensis subsp.
tularensis FSC198]
gi|224457273|ref|ZP_03665746.1| hypothetical protein FtultM_06160 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370655|ref|ZP_04986660.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874978|ref|ZP_05247688.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604663|emb|CAG45721.1| hypothetical protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320975|emb|CAL09104.1| hypothetical protein FTF1088c [Francisella tularensis subsp.
tularensis FSC198]
gi|151568898|gb|EDN34552.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840977|gb|EET19413.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159384|gb|ADA78775.1| hypothetical protein NE061598_06270 [Francisella tularensis subsp.
tularensis NE061598]
Length = 248
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P + L + + F N + + ++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121
Query: 125 VLLHRTWGHN--EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---IS 179
+ + N K+A+ IN + FLP A +DL N +
Sbjct: 122 MTFEQIQKENIINKLAT---------INAANFEK---FLP-------AELDLDNVDKVVC 162
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 163 YTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|148549504|ref|YP_001269606.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida F1]
gi|148513562|gb|ABQ80422.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida F1]
Length = 313
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGT 210
++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R +
Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQ 238
Query: 211 DDLPPSGSPIL--TDDIEIGTLGVVVGKKA 238
+P G+ I T +G + + G A
Sbjct: 239 QAIPAPGAEIFSPTHGSSVGEVVIAAGNGA 268
>gi|325275456|ref|ZP_08141386.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51]
gi|324099407|gb|EGB97323.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51]
Length = 313
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230
>gi|220913464|ref|YP_002488773.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6]
gi|219860342|gb|ACL40684.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6]
Length = 361
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221
PH+ +DLL + L KGCY GQE ++R+ + +R + + LP +GS +L
Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTLPAAGSVVL 288
Query: 222 TDDIEIGTLGVV-----VGKKALAI 241
D ++GT+ V +G ALA+
Sbjct: 289 AGDRKVGTVTSVAQHYEMGPVALAV 313
>gi|326560812|gb|EGE11178.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 46P47B1]
Length = 233
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+
Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
++R+ + + I G +P +G + I + L G +AL IAR
Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPATGGDMGRMSI-VNALATDTGFEALVIAR 210
>gi|238061305|ref|ZP_04606014.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
gi|237883116|gb|EEP71944.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
Length = 370
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLGVV 233
+ L KGCY GQE V+R+ + +R +++ +D P +G+P+ D +G +G
Sbjct: 275 VHLDKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTSDQPPAAGTPVTLDGRAVGFVGTA 334
Query: 234 V-----GKKALAIARIDKVDHA 250
V G+ ALA+ + + D A
Sbjct: 335 VLHHELGQIALAVVKRNVPDDA 356
>gi|297627128|ref|YP_003688891.1| glycine cleavage T-protein, aminomethyl transferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922893|emb|CBL57475.1| glycine cleavage T-protein, aminomethyl transferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 349
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 134 NEKIASDIKTYHELRINHGI----VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
N ++A + + R+ G+ +D + LP+ + L L KGCY GQE
Sbjct: 196 NPRLAG-VWAWEAARVAAGVPRIGIDTDDKTLPNELG--------LYATELDKGCYTGQE 246
Query: 190 VVSRIQH-----RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLG 231
V+R+ + R ++R +++ G+ + LP G PIL D +G +G
Sbjct: 247 TVARVHNVGRPPRRLVR---LLLDGSMNRLPAPGDPILLDGEPVGVVG 291
>gi|187931894|ref|YP_001891879.1| hypothetical protein FTM_1232 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712803|gb|ACD31100.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 248
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 40/218 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 7 NFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V P + L F+ + F++ D+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYAL------FFTKTGFLNH-----DI 112
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNT-------DFLPSTIFPHDALMDLLNG- 177
L T G + S++ T+ ++R + I T FLP A +DL N
Sbjct: 113 L---TKGS---LTSEM-TFEQVRKENIINKLATINAANFEKFLP-------AELDLDNVD 158
Query: 178 --ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ TKGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 159 KVVCYTKGCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|313500349|gb|ADR61715.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 313
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230
>gi|26988156|ref|NP_743581.1| hypothetical protein PP_1423 [Pseudomonas putida KT2440]
gi|24982889|gb|AAN67045.1|AE016333_6 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 313
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 153 IVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++ P + F+P I + ++G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 184 VMGPTRELFIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230
>gi|167035381|ref|YP_001670612.1| folate-binding protein YgfZ [Pseudomonas putida GB-1]
gi|166861869|gb|ABZ00277.1| folate-binding protein YgfZ [Pseudomonas putida GB-1]
Length = 313
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I + ++G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 192 FIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 230
>gi|70919599|ref|XP_733451.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56505261|emb|CAH87045.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 205
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
P D D N IS KGCYIGQEV++R +++ +I K +
Sbjct: 149 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 187
>gi|104783273|ref|YP_609771.1| hypothetical protein PSEEN4300 [Pseudomonas entomophila L48]
gi|95112260|emb|CAK16987.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 315
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
F+P I + ++G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 194 FIPQMIN-----LQAVDGVSFKKGCYTGQEIVARMQYLGKLKRR 232
>gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247]
gi|262084295|gb|ACY20263.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247]
Length = 389
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+ + +R +++ D P +G P++ +G LG
Sbjct: 265 FGAVHLDKGCYRGQETVARVHNLGKSPRRLVLLHLDGSADGRPATGDPVVAGGRTVGRLG 324
Query: 232 VVV 234
VV
Sbjct: 325 TVV 327
>gi|226943486|ref|YP_002798559.1| ygfZ-like protein [Azotobacter vinelandii DJ]
gi|226718413|gb|ACO77584.1| ygfZ-like protein [Azotobacter vinelandii DJ]
Length = 315
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPSTIFPHDALMDLLNGISL 180
A+ L R GH + + ++R G V T F+P I + + G+S
Sbjct: 155 AEALHTRLAGHLPEAPLESWLLAQIRAGIGQVYGATRELFIPQMIN-----LQAVGGVSF 209
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR 203
KGCY GQE+V+R+Q+ +++R
Sbjct: 210 KKGCYSGQEIVARMQYLGKLKRR 232
>gi|53802555|ref|YP_112775.1| hypothetical protein MCA0240 [Methylococcus capsulatus str. Bath]
gi|53756316|gb|AAU90607.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 356
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++ L G+S KGCY GQEV++R+ +R ++++
Sbjct: 241 LEALGGLSYKKGCYPGQEVIARLHYRGQLKRK 272
>gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
Length = 349
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ L KGCY GQE ++R+ + +R +++ D P +G P+ D +G LG VV
Sbjct: 233 VHLDKGCYRGQETIARVHNIGRPPRRLVLLHLDGSADATPATGDPVTVDGRTVGRLGTVV 292
>gi|296112437|ref|YP_003626375.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis RH4]
gi|295920131|gb|ADG60482.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis RH4]
gi|326567016|gb|EGE17139.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 12P80B1]
gi|326569580|gb|EGE19634.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC8]
gi|326572353|gb|EGE22346.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC7]
gi|326577879|gb|EGE27744.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis O35E]
Length = 233
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 134 NEKIASDIKTYHELRI---NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
N+ +D K + +L I N+ + ++ P + + G++ KGCY+GQE+
Sbjct: 103 NKTQQTDTKLWEQLSIKTGNYWLTAKTSEMYQ----PQELRLHQKGGVAYDKGCYLGQEI 158
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
++R+ + + I G +P +G + I + L G +AL IAR
Sbjct: 159 IARLYFKARPKAYLHRILGVGAIPATGGDMGRMSI-VNALATDTGFEALVIAR 210
>gi|255577330|ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis]
gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative [Ricinus communis]
Length = 433
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ +LRI GI P + L + +A L N ISL KGCY GQE ++R+ + ++
Sbjct: 292 NAWEKLRIIQGIPAPGKE-LTNEFNVLEA--GLWNSISLNKGCYKGQETIARLITYDGVK 348
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R I + P GS I D I++G L
Sbjct: 349 QRLWGIHLSAPAEP-GSLITVDGIKVGKL 376
>gi|67922627|ref|ZP_00516133.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
gi|67855555|gb|EAM50808.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
Length = 353
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P+ + L P + L + IS KGCYIGQE ++R+ ++
Sbjct: 220 RVWEQLRIKQGRPYPDQE-LTENYNPLET--GLWSTISFDKGCYIGQETIARLNTYQGVK 276
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+R + ++ +G+ + DD ++G L
Sbjct: 277 QRLWGVKLNQEV-KAGNTVTLDDKKVGIL 304
>gi|109899465|ref|YP_662720.1| glycine cleavage T protein (aminomethyl transferase)
[Pseudoalteromonas atlantica T6c]
gi|109701746|gb|ABG41666.1| glycine cleavage T protein (aminomethyl transferase)
[Pseudoalteromonas atlantica T6c]
Length = 319
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 35/128 (27%)
Query: 98 NGVVLSWNQEHTFSNSSFIDERFSI-------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
NGVVL+ E ++RF + A + H T + +K ++ L I
Sbjct: 144 NGVVLALGSE---------NKRFMLVLTPEGQAHLAAHETLTYADKTLWEV-----LDIK 189
Query: 151 HGIVDPNT----DFLPSTIFPHDALMDL--LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ + T +F+P +M+L L+GIS +KGCY+GQEVV+R + KR
Sbjct: 190 AGVAELRTATSNEFVPQ-------MMNLQALDGISFSKGCYMGQEVVARTKFLG-KNKRA 241
Query: 205 MIITGTDD 212
I D+
Sbjct: 242 AFILKADE 249
>gi|288818695|ref|YP_003433043.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6]
gi|288788095|dbj|BAI69842.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6]
gi|308752283|gb|ADO45766.1| folate-binding protein YgfZ [Hydrogenobacter thermophilus TK-6]
Length = 300
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK 236
ISLTKGCY+GQE ++R+ +R + P ++ + G I + +IG + V +
Sbjct: 210 ISLTKGCYVGQEAIARVYYRG---RTPRVLAKFEARNVREGDKIKEGEKDIGIITSVNSR 266
Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRV 264
LA+ I + I + + T VR+
Sbjct: 267 GDLALGYILRAKANIGEVLPCTAGEVRL 294
>gi|126661608|ref|ZP_01732637.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece
sp. CCY0110]
gi|126617105|gb|EAZ87945.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece
sp. CCY0110]
Length = 212
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P+ + L P +A L + IS KGCYIGQE ++R+ +++R
Sbjct: 78 WQQLRIKQGRPYPDQE-LTEDYNPLEA--GLWSTISFDKGCYIGQETIARLNTYQGVKQR 134
Query: 204 PMIITGTDDLPP--SGSPILTDDIEIGTL 230
+ G P +G I DD ++G L
Sbjct: 135 ---LWGVKLNQPVQTGHTITVDDKKVGIL 160
>gi|222478769|ref|YP_002565006.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
gi|222451671|gb|ACM55936.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
Length = 386
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR------------PMIITGTDD------ 212
++ L N + KGCY+GQEVVSR++++ +R I G D
Sbjct: 244 VLGLRNALDFEKGCYVGQEVVSRVENQGRPSRRLIGLDLDGLADATADIDGDADPEGYDE 303
Query: 213 -LPPSGSPILTDDIEIG-----TLGVVVGKK-ALAIARID 245
LP G+ + D +G +G G ALA AR D
Sbjct: 304 ILPSPGAAVFDGDEAVGEVTRAAVGPAAGDPIALAFARFD 343
>gi|237653170|ref|YP_002889484.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
gi|237624417|gb|ACR01107.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
Length = 345
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+L+ G+ KGCY GQE+V+R Q+ ++KR
Sbjct: 237 ELIGGVDFHKGCYPGQEIVARTQYLGKLKKR 267
>gi|254372745|ref|ZP_04988234.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570472|gb|EDN36126.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 248
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADV--LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+N ++V G FLQ + TAD+ L++ I +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILL-TAFANLKGRIISLCFVKFISNEK 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+L +++ ++L+ L Y + S V P + L + + F N + + ++
Sbjct: 65 LLLSVEQEVFENLLAWLKKYGMFSKV--SFNPNDDYALFFTKTG-FLNHDILTKGSLTSE 121
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG---ISLT 181
+ + E I + + T IN + FLP A +DL N + T
Sbjct: 122 MTFEQV--QKENIINKLAT-----INAANFEK---FLP-------AELDLDNVDKVVCYT 164
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
KGCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 165 KGCYMGQEVIARMHYKAKLKKELAVVKSQVDI 196
>gi|163848163|ref|YP_001636207.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222526066|ref|YP_002570537.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
gi|163669452|gb|ABY35818.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222449945|gb|ACM54211.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
Length = 329
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 140 DIKTYHELRINHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
D T +RI HG + D++P DL +S KGCY+GQE+++R++
Sbjct: 190 DSHTAEVVRIEHGYPRFKHEITLDYIPLE-------ADLWRAVSFQKGCYVGQEIIARME 242
Query: 196 HRNIIRK 202
R I K
Sbjct: 243 SRGRIAK 249
>gi|283779736|ref|YP_003370491.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
gi|283438189|gb|ADB16631.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
Length = 327
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMIITGTDDLPPSGSPI 220
+ P + D L IS KGCY+GQE V+RI H N + + + + G + PP+G+P+
Sbjct: 217 STLPQEMNRDTL-AISFKKGCYLGQETVARIDALGHVNRVLTK-LSLPG-EIAPPTGTPL 273
Query: 221 LTDDIEIGT 229
+ D E GT
Sbjct: 274 VMRD-ETGT 281
>gi|77359673|ref|YP_339248.1| transcriptional regulator [Pseudoalteromonas haloplanktis TAC125]
gi|76874584|emb|CAI85805.1| putative one-carbon metabolism transcriptional regulator, COG 354,
highly conserved in phylogeny [Pseudoalteromonas
haloplanktis TAC125]
Length = 303
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P + ++GIS KGCY GQE V+R+++ ++ I++G D
Sbjct: 186 PQMVNLQAIDGISFKKGCYAGQETVARMKYLGKNKRAMYIVSGQSD 231
>gi|82753086|ref|XP_727534.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483427|gb|EAA19099.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 346
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
P D D N IS KGCYIGQEV++R +++ +I K +
Sbjct: 209 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 247
>gi|225166049|ref|ZP_03727792.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2]
gi|224799709|gb|EEG18195.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2]
Length = 321
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKI 60
S++ + +++ G+ A FLQ I+ + TLP G L +GK++ K+
Sbjct: 13 SAITQKTTAVLRLTGEDASSFLQGQISQETRTTLPQPAIYG-LFLNHKGKVIADAYALKV 71
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFIDE 118
+ + L + S + L L + + +V IE + + + L+ E S S+ I +
Sbjct: 72 SDAEWWLWSEASPANVLAHHLESFIVADDVTIEDRSGDWTLTTLAGPSEAAASLSALIGQ 131
Query: 119 RFSIADVL--------------LHRTWGHNEKIAS----------DIKTYHELRINHGIV 154
A L +W A+ D RI GI
Sbjct: 132 PLPEAGAYARVGEGFMFRGRRGLGDSWKWLAPAAAQPTLDGWTPPDPMLMERARIEAGIP 191
Query: 155 DPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQ 195
D P + PH+ + + IS TKGCY+GQE+++R++
Sbjct: 192 RVPVDIGPGDL-PHEGGPEFVAASISYTKGCYLGQEIMARLK 232
>gi|330470354|ref|YP_004408097.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
gi|328813325|gb|AEB47497.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
Length = 370
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 170 ALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDD 224
A +DL+ + L KGCY GQE V+R+ + +R +++ TD LP +G+P+
Sbjct: 266 AEVDLIAPAVHLDKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDQLPVAGTPVDLAG 325
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253
+G +G V G+ ALA+ + D A+ +
Sbjct: 326 RTVGFVGTAVHHHELGQVALAVIKRSVPDDAVLR 359
>gi|254446453|ref|ZP_05059929.1| Glycine cleavage T-protein C-terminal barrel domain
[Verrucomicrobiae bacterium DG1235]
gi|198260761|gb|EDY85069.1| Glycine cleavage T-protein C-terminal barrel domain
[Verrucomicrobiae bacterium DG1235]
Length = 278
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 98 NGVVLSWNQEHTFSNSSFI------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
NG++ W + + F+ +R I D L R G E D + L I
Sbjct: 98 NGLIAFWGKRGSEGALEFLALTEEGRDRIEIVDAGL-RDIGSEEL---DREAMSFLAIEA 153
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--G 209
+ + F S + P + ++ + +S KGCY+GQEV++R+ +RKR + I+ G
Sbjct: 154 KVPEIGLGFGDSDL-PQELGLER-DAVSFNKGCYLGQEVMARLHAMGRVRKRLVRISIEG 211
Query: 210 TDDLPPSGSPI 220
+ + P PI
Sbjct: 212 PNTIAPGDLPI 222
>gi|116626954|ref|YP_829110.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
gi|116230116|gb|ABJ88825.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
Length = 289
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 45/234 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI---LLYFLISKIEE 62
LS + I V G+ L AI + +V + + +L+PQG+I L F E
Sbjct: 17 LSKRGRIAVRGRDRARLLHAITSNEVKKMTPGSGCYAFLLSPQGRIQADLNLFCF----E 72
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
D F+++ + R+ ++ + Y + V E++ ++ + E
Sbjct: 73 DRFLIDTEPELREKVLPHIKKYIIADQV--ELEDVSAETAAIGLEGPSAATILATLGAPV 130
Query: 110 ----FSNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHEL-------------RI 149
+S+ ++ D + V R + EK A+ ++ + RI
Sbjct: 131 PGTDYSHVAWDDATIAAVTVTGQPGVRIFCPLEKAAAFVRQFESAGAMAASEDDVRLARI 190
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+G D + T P + ++ +S TKGCYIGQE+V RI+ + + K+
Sbjct: 191 ENGRPRYGED-IRDTSLPQETQQ--MHAVSFTKGCYIGQEIVERIRAQGRVNKK 241
>gi|28493623|ref|NP_787784.1| hypothetical protein TWT656 [Tropheryma whipplei str. Twist]
gi|28476665|gb|AAO44753.1| unknown [Tropheryma whipplei str. Twist]
Length = 344
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
PH+ L L + LTKGCY GQE+V+++ + +R + + LP + IL D
Sbjct: 220 LPHE-LGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGK 278
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+G + V L + V ++ +G L V
Sbjct: 279 RVGRVTSVANHWELGPIALGVVKRSVPEGKVLLV 312
>gi|229821893|ref|YP_002883419.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
gi|229567806|gb|ACQ81657.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
Length = 396
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPILT 222
PH+ L L + L KGCY GQE V+R+ + +R ++ + G++D LP G+ +L
Sbjct: 265 IPHE-LDWLRTAVHLDKGCYRGQETVARVFNMGRPPRRLVLLHLDGSEDVLPEPGTEVLA 323
Query: 223 DDIEIGTLGVVV 234
+ +GTL VV
Sbjct: 324 EGRPVGTLTSVV 335
>gi|110668998|ref|YP_658809.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109626745|emb|CAJ53212.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
Length = 373
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 122 IADVLLHR--TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+AD +L T+G N + + ++ L + G NT+ + P+ ++ + N +
Sbjct: 198 VADRILETLLTYGLN-GVPFGYQVWNTLAVEAGTPRFNTEL--ADQIPN--VLGIRNALD 252
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKR 203
KGCYIGQE+VS++++R KR
Sbjct: 253 FEKGCYIGQEIVSKVENRGQPSKR 276
>gi|296333386|ref|ZP_06875839.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675108|ref|YP_003866780.1| glycine cleavage system protein T [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149584|gb|EFG90480.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413352|gb|ADM38471.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 362
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G ++PFLQ ++T DV +L A+ +A+ P G + L+ + E+ +
Sbjct: 49 VSHMGEIEVSGNDSLPFLQRLMTNDVSSLSAGRAQYTAMCYPDGGTVDDLLVYQKGENRY 108
Query: 66 ILEIDRSKRD 75
+L I+ S D
Sbjct: 109 LLVINASNID 118
>gi|304310532|ref|YP_003810130.1| Glycine cleavage T protein (aminomethyltransferase) [gamma
proteobacterium HdN1]
gi|301796265|emb|CBL44473.1| Glycine cleavage T protein (aminomethyltransferase) [gamma
proteobacterium HdN1]
Length = 374
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 137 IASDIKTYHEL--RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+AS ++ + + + PNT P + D LN I+ KGCY GQE+++R+
Sbjct: 226 LASGLEGWQRCLSELGQAHIHPNTQ---DKFIPQELNYDQLNAINFKKGCYKGQEIIARL 282
Query: 195 QHRNIIRKR 203
+ + R
Sbjct: 283 HFKGTPKYR 291
>gi|327542384|gb|EGF28867.1| aminomethyltransferase [Rhodopirellula baltica WH47]
Length = 342
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
IS TKGCY+GQE V+R+ ++K+ ++ LPP P D + + +
Sbjct: 224 ISFTKGCYLGQETVARLDALGQVQKK-LVRWKLAGLPPGAEPAADDKLR----ALDAPED 278
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVR 263
A + RI V +G L + R
Sbjct: 279 AKPVGRITSVGRIDDQGEGLAMGYAR 304
>gi|68005366|ref|XP_670005.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56484827|emb|CAI01638.1| conserved hypothetical protein [Plasmodium berghei]
Length = 222
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
P D D N IS KGCYIGQEV++R +++ +I K +
Sbjct: 71 PFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINKYKL 109
>gi|28572820|ref|NP_789600.1| hypothetical protein TW679 [Tropheryma whipplei TW08/27]
gi|28410953|emb|CAD67338.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
Length = 321
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
PH+ L L + LTKGCY GQE+V+++ + +R + + LP + IL D
Sbjct: 197 LPHE-LGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGK 255
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+G + V L + V ++ +G L V
Sbjct: 256 RVGRVTSVANHWELGPIALGVVKRSVPEGKVLLV 289
>gi|78183841|ref|YP_376275.1| hypothetical protein Syncc9902_0259 [Synechococcus sp. CC9902]
gi|78168135|gb|ABB25232.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 265
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 26/192 (13%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE--DTFILE 68
+K+ G+ FLQ +ADV P + LT G++ + D +L
Sbjct: 13 LLKLEGEGTRNFLQGQTSADVADTPEGNLVQTCWLTATGRLRALLELRLRANGADVLVLA 72
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---FIDERFSIADV 125
D + D+++F R + +QPI + S SS ++D+ D
Sbjct: 73 GDATAVARGFDQVIFPADR----VRLQPI----AEQRRVQRLSTSSAALWLDD-----DS 119
Query: 126 LLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L W N + + E R+ G + N D P + L + +SL+KGC
Sbjct: 120 QLPPNWTSNPANPKQFERWRIEQRLVFGPGELNADANPLE-------LGLSDHVSLSKGC 172
Query: 185 YIGQEVVSRIQH 196
Y+GQE V+++ +
Sbjct: 173 YLGQETVAKLAN 184
>gi|163784745|ref|ZP_02179551.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879986|gb|EDP73684.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1]
Length = 306
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVV 233
IS TKGCY+GQEV++R+ +R K P + + G I+ D +IG + V
Sbjct: 209 AISFTKGCYVGQEVIARVHYRG---KPPRTLAKFEVDRQKIKEGEKIIDGDKKIGEITSV 265
Query: 234 VGKKALAIARIDKV 247
+ +A+ I K
Sbjct: 266 SPVENIALGYILKA 279
>gi|311693662|gb|ADP96535.1| glycine cleavage T-protein (aminomethyl transferase) [marine
bacterium HP15]
Length = 331
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ G+ KGCY GQEV++R+ ++K I ++DLP G+ + + +G +
Sbjct: 218 VGGVHFKKGCYTGQEVIARMHFLGQLKKSLFRFRIEQSEDLPTPGTALFAGERSVGEVVN 277
Query: 233 VVGKKA-----LAIARIDKVDHAI 251
+ + LA+ R D ++A+
Sbjct: 278 AIKYRDGSVELLAVVRHDAAENAL 301
>gi|289581173|ref|YP_003479639.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
gi|289530726|gb|ADD05077.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
Length = 384
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
++ L + KGCY+GQEVVSR+++R +R + +T
Sbjct: 244 VLGLTTALDFEKGCYVGQEVVSRVENRGQPSRRLIGLT 281
>gi|254417054|ref|ZP_05030801.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus
chthonoplastes PCC 7420]
gi|196176221|gb|EDX71238.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus
chthonoplastes PCC 7420]
Length = 353
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + +LRI G P+ + L P +A L N IS KGCYIGQE ++R+ ++
Sbjct: 219 RVWQQLRIEQGRPLPDYE-LTEDYNPLEA--GLWNTISFDKGCYIGQETIARLNTYKGVK 275
Query: 202 KR 203
++
Sbjct: 276 QQ 277
>gi|302535834|ref|ZP_07288176.1| glycine cleavage T protein [Streptomyces sp. C]
gi|302444729|gb|EFL16545.1| glycine cleavage T protein [Streptomyces sp. C]
Length = 322
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 34/251 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS++ + V G + +L ++T V LP A + IL+ G I LY + +
Sbjct: 43 VDLSHRGVVTVTGADRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLVD---D 99
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNS 113
+T ++ +++L+ L FY++ R+ + G + +EH
Sbjct: 100 GETVWAHVEPGTQEALLGYLESMKFFYRVEVADRTADFAVVHLPAGSIAEPGKEHV---- 155
Query: 114 SFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRI--NHGIVDPNTDFLPSTIFP 167
+ E DV L R A+ + Y LR+ + V TD P
Sbjct: 156 --VRETAHGRDVFLPRPQLEAFAAAHGPAAGLLAYEALRVEAHRPRVGAETDH---RTIP 210
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD-LPPSGSPI-LTD 223
H+ L + + L KGCY GQE V+R+ + +R + + G++ LP G+P+ L
Sbjct: 211 HE-LGWIGTAVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPVRLAA 269
Query: 224 DIEIG-TLGVV 233
D E G LG V
Sbjct: 270 DGEDGRQLGFV 280
>gi|294056332|ref|YP_003549990.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
gi|293615665|gb|ADE55820.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
Length = 307
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 41/250 (16%)
Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
MS+VY + + I + A FLQ+ + ++ L +GK++ I
Sbjct: 1 MSAVYAYQFTPAALIHASDEDAADFLQSQFSNELRPFAEGRCTYGLWLDVKGKVIADSFI 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----------INGVVLSWNQ 106
+ +E++F+L S + L KL + + +V +EI + + W
Sbjct: 61 LQCDEESFLLYSATSSAEGLQAKLEQHIIADDVELEISEGARVISLFGPGVESALTEWGA 120
Query: 107 EHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKTYHEL--------RINHGIVDPN 157
F++ A V L W G ++ ++ L R++ VD N
Sbjct: 121 -SVPQTGDFVEH----AGVRLLPVWNGPRPRVDCIVRDAAALDTVVDALKRLSVEFVDTN 175
Query: 158 TDFLPST-----IFPHDALMDLLNG--------ISLTKGCYIGQEVVSRIQHRNIIRKRP 204
L + P + L G +S TKGC++GQEVV+R+ + R+
Sbjct: 176 RFELERVEQGYPVVPQELGEGDLPGEGGAENYALSFTKGCFLGQEVVARMHNLGTPRRAL 235
Query: 205 MIITGTDDLP 214
++G D P
Sbjct: 236 YRVSGVGDPP 245
>gi|227876313|ref|ZP_03994426.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|227843086|gb|EEJ53282.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length = 449
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
N + +D+ + +RI + +P + PH+ L L + +SL KGCY GQE V++
Sbjct: 246 NHLVEADLGVWEAVRIARWRPRLGREGMPG-MLPHE-LDWLRSAVSLNKGCYTGQETVAK 303
Query: 194 IQHRNIIRKR 203
+ +R +R
Sbjct: 304 LVNRGRPPRR 313
>gi|255615044|ref|XP_002539647.1| conserved hypothetical protein [Ricinus communis]
gi|223504030|gb|EEF22736.1| conserved hypothetical protein [Ricinus communis]
Length = 279
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
S ++V G A FLQ +T DV A A TP+G+I FLI + +E T L +
Sbjct: 163 STLQVAGPDAAKFLQGQLTCDVAQATTTQAVPGAHCTPKGRIRSSFLIGRRDEQTHWLRV 222
>gi|157144299|ref|YP_001451618.1| hypothetical protein CKO_00003 [Citrobacter koseri ATCC BAA-895]
gi|157081504|gb|ABV11182.1| hypothetical protein CKO_00003 [Citrobacter koseri ATCC BAA-895]
Length = 300
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+A + HE ++ G+ D L S I P DAL D L+G+ IG E+ +QH
Sbjct: 195 LAGAKRGQHENCLSRGVFDLRARTL-SHILPQDALFDALSGL------LIGHEIAQMLQH 247
Query: 197 RNIIRKRPMIITGTDDL 213
I +++ G+D+L
Sbjct: 248 YAIPAHEEIVLVGSDEL 264
>gi|269976111|ref|ZP_06183110.1| glycine cleavage T protein [Mobiluncus mulieris 28-1]
gi|307701532|ref|ZP_07638550.1| glycine cleavage T-protein C-terminal barrel domain protein
[Mobiluncus mulieris FB024-16]
gi|269935704|gb|EEZ92239.1| glycine cleavage T protein [Mobiluncus mulieris 28-1]
gi|307613324|gb|EFN92575.1| glycine cleavage T-protein C-terminal barrel domain protein
[Mobiluncus mulieris FB024-16]
Length = 415
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
N + +D+ + +RI + +P + PH+ L L + +SL KGCY GQE V++
Sbjct: 212 NHLVEADLGVWEAVRIARWRPRLGREGMPG-MLPHE-LDWLRSAVSLNKGCYTGQETVAK 269
Query: 194 IQHRNIIRKR 203
+ +R +R
Sbjct: 270 LVNRGRPPRR 279
>gi|284028969|ref|YP_003378900.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
gi|283808262|gb|ADB30101.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
Length = 334
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 44/253 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + + G + +L A+ T + + + +L+P G + + + + +
Sbjct: 45 VDLSHRDVVTISGPDRLTWLHALTTQYFEGMRPGTSTTALLLSPTGHVE-HAMYGVDDGE 103
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------IQPINGVVLSWNQEHTF 110
TF L + +L++ L S V I P +G + +
Sbjct: 104 TFWLHTEPGAAAALVEWLQKMVFMSRVEIADVTDAFAIVWRPGTAPADGPLTRSGGDSLG 163
Query: 111 SNSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI----VDPNTDFLPST 164
+F+ +E + A++ + + Y LRI G +D + +P
Sbjct: 164 GYETFLPREELSAFAEL---------AGPPAGVWAYEALRIEAGAPRLGLDTDERAIP-- 212
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGT-DDLPPSGS 218
+ L L G+ L KGCY GQE V+R+ + R ++R + + G+ D LP G
Sbjct: 213 ----NELGWLGIGVHLDKGCYRGQETVARVHNLGRPPRRLVR---LHLDGSVDHLPAHGY 265
Query: 219 PILTDDIEIGTLG 231
+ D ++G +G
Sbjct: 266 AVRAGDKQVGFVG 278
>gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a]
gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 363
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L + + L KGCY GQE V+R+ + +R +++ + GS + D E+G +G
Sbjct: 242 LADAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAPGSAVTADGREVGFVGTS 301
Query: 234 -----VGKKALAIARIDKVDHAIKKGMALTV 259
+G ALAI V ++ G AL V
Sbjct: 302 EMHEELGPIALAI-----VKRSVPAGAALVV 327
>gi|288553360|ref|YP_003425295.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
gi|288544520|gb|ADC48403.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
Length = 365
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G +A+ +LQ ++T DV L A+ +A+ P G + LI + ED +
Sbjct: 51 VSHMGEVEVKGDNALAYLQKMMTNDVSKLVDNQAQYTAMCYPNGGTVDDLLIYRKSEDDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKL 86
+L I+ S D +D L +K+
Sbjct: 111 LLVINASNIDKDMDWLNQHKI 131
>gi|223936903|ref|ZP_03628812.1| folate-binding protein YgfZ [bacterium Ellin514]
gi|223894472|gb|EEF60924.1| folate-binding protein YgfZ [bacterium Ellin514]
Length = 363
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV 234
IS +KGCYIGQEV++RI+ + K + D LP G + D E+G + V
Sbjct: 258 ISYSKGCYIGQEVIARIRTYGQVAKALRGLRLDDKLKTLPAKGDKLFHDGKEVGYITSAV 317
Query: 235 GKKAL 239
L
Sbjct: 318 SSSKL 322
>gi|227547970|ref|ZP_03978019.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium lipophiloflavum DSM 44291]
gi|227079981|gb|EEI17944.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium lipophiloflavum DSM 44291]
Length = 377
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 44/277 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ ++ P A + L QG IL + +S +
Sbjct: 73 SHRKVIAVSGPDAPTFLNNLLSQKLVDAPEGFAASALDLDIQGHILHHADVS-YANGVYY 131
Query: 67 LEIDRSKRDSLI---DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119
L+ + ++LI K++F+ S E+ GV+ + ++ R
Sbjct: 132 LDTPAHQHETLIAFLTKMVFWSQVSINDTEL----GVLTVVGDAPAVAEAAVTRTRPWGE 187
Query: 120 FSIADVLLHRTWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHD 169
DVL+ R G ++ ++ + LR+ G + D +I PH+
Sbjct: 188 TQRTDVLVER--GRVGEVVDKLRDQGVRLAGLMAFTALRVRAGEPELRADLDEKSI-PHE 244
Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT----GTDDLPP-SGS 218
A L+N + L KGCY GQE V+R++ N+ R +++ G+ + P G+
Sbjct: 245 A-PSLINRGPYVGAVHLAKGCYRGQETVARVE--NLGRSPRLLVMLHLDGSAPVDPVPGA 301
Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
I +G LG V G ALA+ + ++ A
Sbjct: 302 AITLAGRGVGRLGTVAHDADYGPIALALVKRSALNSA 338
>gi|78047795|ref|YP_363970.1| putative aminomethyl transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036225|emb|CAJ23916.1| putative aminomethyl transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 290
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P +D L S+ KGCY GQE+V+R H KR + + TD +G + D
Sbjct: 186 PQQLALDRLQAYSVKKGCYPGQEIVART-HFLGKAKRVLQLLETDAAVDAGDAVALDGSA 244
Query: 227 IGTLGVVVGKKALAI 241
IGT+ V G ALA+
Sbjct: 245 IGTVVSVAGNLALAV 259
>gi|333031446|ref|ZP_08459507.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
gi|332742043|gb|EGJ72525.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
Length = 363
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I V G A+ FLQ + + DV L + S + QG I+ FL+ K EED +
Sbjct: 48 VSHMGEIWVKGDKALDFLQRVTSNDVSKLQVGKIQYSCFINEQGGIIDDFLVYKYEEDKY 107
Query: 66 ILEIDRSKRD 75
+L ++ + +
Sbjct: 108 LLVVNAANTE 117
>gi|299136495|ref|ZP_07029678.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8]
gi|298601010|gb|EFI57165.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8]
Length = 317
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ + KGCY+GQE+V RI+ R + + DLP +PI + +G L
Sbjct: 217 HALHFNKGCYLGQEIVERIRSRGQVHRTFTAFRLIGDLPTLPAPIEANGKPVGEL 271
>gi|149374722|ref|ZP_01892496.1| predicted aminomethyltransferase [Marinobacter algicola DG893]
gi|149361425|gb|EDM49875.1| predicted aminomethyltransferase [Marinobacter algicola DG893]
Length = 332
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 37/261 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62
V +S++ +++ G FLQ + + + + +A TP+G+ Y L + +
Sbjct: 19 VSVSDRVMVRITGPGTNKFLQGQFSQQIDDVTQDHSPRAAACTPKGRA--YCLTRLVRDG 76
Query: 63 DTFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQP---INGVVLSWNQEHTFSNSS---- 114
D ++E+ + + + L Y L +EI+P I G++ E ++
Sbjct: 77 DDVLMELPAALSEGTVTHLRKYLMLFRGTSMEIEPDARILGLLGEAAAEKLLPGNTGALA 136
Query: 115 ---------------FIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINH 151
+D +A L +T G + + A+ + + I
Sbjct: 137 AAGDSVKINGGHLIRTMDTAEGMARYELWQTGGLDTSLQQSLKDLPAAPLADWQASEIAA 196
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ T S + P + GI KGCY GQEV++R+ ++K T +D
Sbjct: 197 GVASLTTATTESFV-PQMLNWQHVGGIHFKKGCYTGQEVIARMHFLGQLKKSLFRFTCSD 255
Query: 212 --DLPPSGSPILTDDIEIGTL 230
LP G +L + +G +
Sbjct: 256 AGSLPAPGEALLDGERAVGNV 276
>gi|294788261|ref|ZP_06753504.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC
29453]
gi|294483692|gb|EFG31376.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC
29453]
Length = 274
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-------- 226
+ G+ KGCY GQE+++R Q+R + KR + I + +G+P+ + E
Sbjct: 183 IGGVHFRKGCYPGQEIIARAQYRGQV-KRGLAIARNPNPQIAGAPVQDANGEEAGLVLNS 241
Query: 227 IGTLGVVVGKKALAIARIDKVDHAI 251
+G L ++V K + + + V ++
Sbjct: 242 VGDLNLLVVKYGVVSSELRDVSGSV 266
>gi|119471895|ref|ZP_01614203.1| putative one-carbon metabolism transcriptional regulator
[Alteromonadales bacterium TW-7]
gi|119445268|gb|EAW26558.1| putative one-carbon metabolism transcriptional regulator
[Alteromonadales bacterium TW-7]
Length = 303
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P + + GIS KGCY GQE V+R+++ ++ I++G +
Sbjct: 186 PQMVNLQAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSE 231
>gi|321311941|ref|YP_004204228.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
gi|320018215|gb|ADV93201.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
Length = 362
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ +
Sbjct: 49 VSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRY 108
Query: 66 ILEIDRSKRD 75
+L I+ S D
Sbjct: 109 LLVINASNID 118
>gi|94969655|ref|YP_591703.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
gi|94551705|gb|ABF41629.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
Length = 342
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV- 234
+ + +KGCY+GQE+V RI R + R L SG+ ++ D E+G + V
Sbjct: 247 HALHFSKGCYVGQEIVERIHSRGNVH-RGFTGFSLSQLVNSGTKLVRDGKEVGEITSVAE 305
Query: 235 --GKKALAIARIDK 246
KK +A+ + +
Sbjct: 306 LPSKKIIALGYVRR 319
>gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
Length = 364
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
A+ + LR+ P D TI PH+ + + + L KGCY GQE V+++Q+
Sbjct: 209 AAGSWAFTALRVESLRPRPGVDTDEKTI-PHEVNW-IGSAVHLDKGCYRGQETVAKVQNV 266
Query: 198 NIIRKRPMI--ITGTDDL-PPSGSPILTDDIEIGTLGVVV 234
+R ++ + GT ++ P +G P+ D +G +G V
Sbjct: 267 GRPPRRMLLLHLDGTREVQPETGDPVRHGDRVVGRVGSVA 306
>gi|218883383|ref|YP_002427765.1| phosphate uptake regulator, PhoU [Desulfurococcus kamchatkensis
1221n]
gi|218764999|gb|ACL10398.1| phosphate uptake regulator, PhoU [Desulfurococcus kamchatkensis
1221n]
Length = 338
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 22 FLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80
++ D+L+LP ++ R ++L P LL L +E +T + D +RDSLIDK
Sbjct: 122 YIMLACLVDILSLPLSEVLRKMSMLIPA---LLRDLKRNMETNTLL---DMEERDSLIDK 175
Query: 81 LLFYKLRS-NVIIEIQPINGVVL-------SWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
L Y +R N++ ++G +L S + + +N I ER VLLHR W
Sbjct: 176 LYLYAIRQLNMV-----LHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHR-WY 229
Query: 133 HNEK 136
+N +
Sbjct: 230 NNAR 233
>gi|311740216|ref|ZP_07714048.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304771|gb|EFQ80842.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC
33035]
Length = 354
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I+V GK A FL +++ + P G+ L QG IL + I + + D F+
Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRTD-DAFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+++ ++ DSL L S V +E
Sbjct: 110 IDVPGAQFDSLFKFLTMMVFWSEVTVE 136
>gi|291484901|dbj|BAI85976.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. natto BEST195]
Length = 362
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ +
Sbjct: 49 VSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRY 108
Query: 66 ILEIDRSKRD 75
+L I+ S D
Sbjct: 109 LLVINASNID 118
>gi|269218168|ref|ZP_06162022.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212296|gb|EEZ78636.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 531
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG-TDDLPPSGSPILT 222
PH+ L L + L KGCY GQE V+++ + +R + + G D+LP +G P+ +
Sbjct: 361 LPHE-LDWLRTAVHLNKGCYRGQETVAKLVNLGRPPRRLVELFLEGPVDELPRTGDPVTS 419
Query: 223 DDIEIGTLGVVV-----GKKALAIAR 243
++G + V G ALA+ R
Sbjct: 420 GGRKVGVVASAVRHPEDGPVALALVR 445
>gi|124809754|ref|XP_001348671.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7]
gi|23497569|gb|AAN37110.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7]
Length = 524
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTD-FLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+N I DI +++ N + D F + P D D LN ++ KGCY+GQE +
Sbjct: 309 NNNNIYKDITINNDINKNVKKIKNERDVFTFKNLTPFDLNYDNLNYLTKEKGCYVGQEAI 368
Query: 192 SRIQHRNIIRKRPMII 207
+R ++ I K + +
Sbjct: 369 NRTRNEIFISKYSLTL 384
>gi|157692956|ref|YP_001487418.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
gi|166989725|sp|A8FF41|GCST_BACP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157681714|gb|ABV62858.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
Length = 365
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ +
Sbjct: 49 VSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+L I+ S + ++ LL ++ ++V+I+
Sbjct: 109 LLVINASNIEKDVEWLLQHQGENDVLIQ 136
>gi|194016802|ref|ZP_03055415.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
gi|194011408|gb|EDW20977.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
Length = 365
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ +
Sbjct: 49 VSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+L I+ S + ++ LL ++ ++V+I+
Sbjct: 109 LLVINASNIEKDVEWLLQHQGENDVLIQ 136
>gi|91070613|gb|ABE11512.1| conserved hypothetical protein [uncultured Prochlorococcus marinus
clone HOT0M-8G12]
Length = 278
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK----ILLYFLISKIEEDTFILEI 69
+ GK A FL I T+++L K+ + + LTP G I + FL +E ILE
Sbjct: 18 ITGKDARKFLNGITTSNILDSENKVIK-TCWLTPNGVLRSLIEIIFLERNLE--VIILEG 74
Query: 70 DRSKRDSLIDKLLF-----YKLRSNVIIEIQPINGVVLSW--NQEHTFSNSSFIDERFSI 122
+ ++ + +K++F + +I IQ I+ SW NQ F D+ F I
Sbjct: 75 NTNEIINYFNKIIFPVDDVFLSEPFLINRIQEIDEFS-SWRTNQPIFFKTE---DKEFEI 130
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L N I +D+K + +IN I + L DL I K
Sbjct: 131 YKNKL------NLLIPNDLKLW---KINQAIPSLGMEINGKNNPLELGLQDL---IDFNK 178
Query: 183 GCYIGQEVVSRIQH 196
GCY+GQE +S+I++
Sbjct: 179 GCYLGQETMSKIKN 192
>gi|148273681|ref|YP_001223242.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831611|emb|CAN02579.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 384
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD-LPPSGSPILT 222
PH+ L L + + L+KGCY GQE V+++ + +R +++ G+D LP +GS +
Sbjct: 246 IPHE-LDWLRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVLLQLDGSDAVLPGAGSEVRL 304
Query: 223 DDIEIGTLGVVVG 235
GT G VVG
Sbjct: 305 PAAADGTPGEVVG 317
>gi|229820406|ref|YP_002881932.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333]
gi|229566319|gb|ACQ80170.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333]
Length = 381
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + I+V G +A L A + + V L AR + +L P G +L ++ ++ D F
Sbjct: 57 LSHMAQIEVTGPAAAAGLDASVVSRVAALEVGRARYTMLLAPDGGVLDDVIVYRLAADDF 116
Query: 66 ILEIDRSKRDSLIDKL 81
++ + + R +++D L
Sbjct: 117 LVVANAANRLTVLDAL 132
>gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN]
gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae]
Length = 373
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+Q N+ + M++ G+ + +G +L + +G LG
Sbjct: 250 GAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAVGRLG 307
Query: 232 VVV-----GKKALAI 241
VV G ALA+
Sbjct: 308 TVVEHVDLGPVALAL 322
>gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923]
gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae]
gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 366
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE V+R+Q N+ + M++ G+ + +G +L + +G LG
Sbjct: 243 GAVHLDKGCYRGQETVARVQ--NLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAVGRLG 300
Query: 232 VVV-----GKKALAI 241
VV G ALA+
Sbjct: 301 TVVEHVDLGPVALAL 315
>gi|332885678|gb|EGK05924.1| aminomethyltransferase [Dysgonomonas mossii DSM 22836]
Length = 365
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I V G A+PFLQ +++ DV TL A+ +AI+ QG I+ +I E +
Sbjct: 48 VSHMGEIWVKGPRALPFLQRMLSNDVATLEIGKAQYTAIINDQGGIVDDIIIYHYEPYKY 107
Query: 66 ILEIDRS 72
+L ++ S
Sbjct: 108 MLVVNAS 114
>gi|119964440|ref|YP_948688.1| aminomethyltransferase (glycine cleavage system Tprotein)
[Arthrobacter aurescens TC1]
gi|119951299|gb|ABM10210.1| putative aminomethyltransferase (Glycine cleavage system Tprotein)
[Arthrobacter aurescens TC1]
Length = 354
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221
PH+ +DLL + L KGCY GQE ++R+ + +R + + LP GS +
Sbjct: 224 IPHE--LDLLRTSVHLNKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTLPAVGSVVF 281
Query: 222 TDDIEIGTLGVV-----VGKKALAI 241
+ ++GTL V +G ALA+
Sbjct: 282 VGERKVGTLTSVAQHFEMGPVALAV 306
>gi|156100279|ref|XP_001615867.1| aminomethyl transferase domain containing protein [Plasmodium vivax
SaI-1]
gi|148804741|gb|EDL46140.1| aminomethyl transferase domain containing protein [Plasmodium
vivax]
Length = 535
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
P D D LN ++ KGCY+GQE ++R ++ I K + +
Sbjct: 334 PFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINKYQLTMC 375
>gi|170783039|ref|YP_001711373.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157609|emb|CAQ02807.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 384
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD-LPPSGSPILT 222
PH+ L L + + L+KGCY GQE V+++ + +R +++ G+D LP +GS +
Sbjct: 246 IPHE-LDWLRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVLLQLDGSDAVLPGAGSEVRL 304
Query: 223 DDIEIGTLGVVVGK 236
+ G G VVG
Sbjct: 305 PAADDGAPGEVVGS 318
>gi|308174251|ref|YP_003920956.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens DSM 7]
gi|307607115|emb|CBI43486.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens DSM 7]
gi|328554197|gb|AEB24689.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens TA208]
gi|328912590|gb|AEB64186.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens LL3]
Length = 366
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G+ A+ FLQ ++T DV L K A +A+ P G + LI + E +
Sbjct: 49 VSHMGEVEVSGQDALSFLQKMMTNDVADLKPKSALYTAMCYPDGGTVDDLLIYQKSETCY 108
Query: 66 ILEIDRS 72
+L I+ S
Sbjct: 109 LLVINAS 115
>gi|323359172|ref|YP_004225568.1| aminomethyltransferase [Microbacterium testaceum StLB037]
gi|323275543|dbj|BAJ75688.1| predicted aminomethyltransferase [Microbacterium testaceum StLB037]
Length = 362
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 165 IFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD-LPPSGSPI 220
+ PH+ MD L + L+KGCY GQE V+++ + +R + + G+D+ LP G +
Sbjct: 228 LLPHE--MDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRVVALQLDGSDNVLPQRGDEV 285
Query: 221 LTDDIEIGTL 230
D IG +
Sbjct: 286 RVGDAVIGAI 295
>gi|221059411|ref|XP_002260351.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810424|emb|CAQ41618.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 531
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
P D D LN ++ KGCY+GQE ++R ++ I K + +
Sbjct: 342 PFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINKYQLTMC 383
>gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
Length = 393
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
L + L KGCY GQE V+R+ + +R +++ + GSP+ T ++G +G
Sbjct: 278 LTGAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGAVAAPGSPVTTAGRQVGFVG 335
>gi|269124918|ref|YP_003298288.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
gi|268309876|gb|ACY96250.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
Length = 328
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTDDLPPSGSPILT 222
PH+A + + L KGCY GQE V+R+ + +R +++ D LP G P+
Sbjct: 202 IPHEAGW-IDEAVHLNKGCYRGQETVARVHNLGRPPRRLVMLHLDGSVDHLPAHGDPVEL 260
Query: 223 DDIEIGTLGVV-----VGKKALAIAR 243
+G +G +G ALA+ +
Sbjct: 261 GGRRVGFVGTAARHHELGPIALAMVK 286
>gi|116671554|ref|YP_832487.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
gi|116611663|gb|ABK04387.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
Length = 361
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 166 FPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPIL 221
PH+ +DLL + L KGCY GQE V+R+ + +R + + LP GS +
Sbjct: 231 IPHE--LDLLRTAVHLAKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTLPAVGSEVR 288
Query: 222 TDDIEIGTLGVVV-----GKKALAI 241
+ ++GT+ VV G ALA+
Sbjct: 289 LGERKVGTVTSVVQHYEMGPIALAV 313
>gi|32470742|ref|NP_863735.1| aminomethyltransferase [Rhodopirellula baltica SH 1]
gi|32442887|emb|CAD71406.1| conserved hypothetical protein-putative aminomethyltransferase
[Rhodopirellula baltica SH 1]
Length = 342
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
IS TKGCY+GQE V+R+ ++K+ ++ LP P D + L K
Sbjct: 224 ISFTKGCYLGQETVARLDALGQVQKK-LVRWKLSGLPAGAEPAADDKLR--ALDAPEDAK 280
Query: 238 AL----AIARIDKVDHAIKKGMALTVH 260
+ ++ RID + G A H
Sbjct: 281 PVGRITSVGRIDDQGEGLAMGYARRSH 307
>gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c [Mycobacterium abscessus ATCC 19977]
gi|169239798|emb|CAM60826.1| Conserved hypothetical protein (glycine cleavage T-protein
aminomethyl transferase?) [Mycobacterium abscessus]
Length = 364
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 166 FPHD----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPS 216
PH+ A+ D + L KGCY GQE V+R+ + + K P + G+ D P
Sbjct: 222 IPHEVGWIAIGDDPRAVHLAKGCYRGQETVARVHN---LGKPPRALVLLHLDGSADRPAP 278
Query: 217 GSPILTDDIEIGTLGVVV 234
G + +G +G VV
Sbjct: 279 GDEVAAAGRAVGRVGSVV 296
>gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
Length = 369
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTD-DIEI 227
L + L KGCY GQE V+R+ + +R +++ GT LP G P+ + +
Sbjct: 244 LSTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLNLDGSVGT--LPEPGEPVTSGAGRAV 301
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
G LG + L + + +++ G L V G+
Sbjct: 302 GRLGTIAQHHELGPIALALIKRSVEAGTPLLVGGI 336
>gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
gi|172044257|sp|A4J2F6|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
Length = 364
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I++ G +A F+Q ++T D+ L A S + PQG + L+ ++E+ +
Sbjct: 51 VSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQY 110
Query: 66 ILEIDRSKRD 75
+L ++ S D
Sbjct: 111 LLVVNASNTD 120
>gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
Length = 376
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 180 LTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVV 233
+ KGCY GQE VS++ + RN++ + + G+ ++ P G P+L D +G +G V
Sbjct: 261 VAKGCYRGQETVSKVHNVGRPPRNLLL---LHLDGSPEVTPEPGDPVLLDGRTVGRIGTV 317
Query: 234 V-----GKKALAIAR 243
+ G ALA+ +
Sbjct: 318 IQHHELGPIALALVK 332
>gi|172041293|ref|YP_001801007.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM
7109]
gi|171852597|emb|CAQ05573.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM
7109]
Length = 391
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE VSR+Q+ + K P + + LP G+ + IG +G
Sbjct: 268 VHLNKGCYRGQETVSRVQN---LGKPPRTLVLLHLDGSRNALPEVGTDLTAGGRRIGRVG 324
Query: 232 -----VVVGKKALAIARIDKVD 248
++G ALA+ R + V+
Sbjct: 325 SSVHDAILGPIALALVRRNVVE 346
>gi|294509140|ref|YP_003566068.1| aminomethyl transferase [Bacillus megaterium QM B1551]
gi|294352064|gb|ADE72388.1| aminomethyl transferase [Bacillus megaterium QM B1551]
Length = 360
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S +F+KV G SA FLQ +IT D+ L + +L G L+ LI + E+ +
Sbjct: 47 FSFNTFLKVSGDSASSFLQELITKDLDYLTEEQTVTCLMLDEDGH-LVTELIVYVMENEY 105
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
+LEI+ S + D L + ++ V+IE
Sbjct: 106 LLEIEPSLSEKAEDYLQSH-IKDGVLIE 132
>gi|237785004|ref|YP_002905709.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM
44385]
gi|237757916|gb|ACR17166.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM
44385]
Length = 448
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-----LPPSGSPILTDDIEIGTLGV 232
+ L KGCY GQE VSRIQ N+ R +++ D P G I + ++G +G
Sbjct: 313 VHLNKGCYRGQETVSRIQ--NLGRPPRLLVKLQVDGYSARRPEPGEAITSGKRKVGRIGT 370
Query: 233 VV-----GKKALAIARIDKVDHAIKKG 254
VV G AL + + V+ I G
Sbjct: 371 VVDDCDEGPIALGLVKRSIVEKLIGSG 397
>gi|110596895|ref|ZP_01385185.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM
13031]
gi|110341582|gb|EAT60042.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM
13031]
Length = 365
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ V GK A+ FLQ++ T D+ A+ + +L P G I+ +I +I+ +TF
Sbjct: 48 VSHMGNFYVRGKRALEFLQSVTTNDISKAKDGQAQYNLMLYPSGGIVDDLIIYRIDSETF 107
Query: 66 ILEIDRSK 73
L ++ S
Sbjct: 108 FLIVNASN 115
>gi|300932485|ref|ZP_07147741.1| putative aminomethyltransferase [Corynebacterium resistens DSM
45100]
Length = 427
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT------GTDDLPPSGSPILTDDIEIGTLG 231
+ + KGCY GQE VSR+Q+ + K P ++ + LP GS + IG +G
Sbjct: 301 VHMNKGCYRGQETVSRVQN---LGKPPRVLVLLHLDGSANRLPAVGSDFTAEGKTIGRVG 357
Query: 232 VV-----VGKKALAIAR---IDKVDHAIKKGMALTVHGV 262
+G ALA+ + ++K+ + AL GV
Sbjct: 358 SSAHDGDLGPIALALVKRGIVEKLASNPQSAPALQADGV 396
>gi|296118897|ref|ZP_06837470.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM
20306]
gi|295967995|gb|EFG81247.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM
20306]
Length = 359
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 173 DLLNGISLTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGT-DDLPPSGSPILTDDIE 226
+L + L KGCY GQE ++R+++ R ++R + + G+ ++P +G+ I +
Sbjct: 231 ELQGAVHLEKGCYRGQETIARVENLGRSPRLVVR---LYLDGSVPEMPETGADITSGGRR 287
Query: 227 IGTLGVVV 234
+G +G ++
Sbjct: 288 VGRVGTII 295
>gi|304380875|ref|ZP_07363535.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340602|gb|EFM06536.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 363
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|282916807|ref|ZP_06324565.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus D139]
gi|283770613|ref|ZP_06343505.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19]
gi|282319294|gb|EFB49646.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus D139]
gi|283460760|gb|EFC07850.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19]
gi|298694819|gb|ADI98041.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ED133]
Length = 363
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
Length = 376
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 14/73 (19%)
Query: 180 LTKGCYIGQEVVSRIQH-----RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVV 233
+ KGCY GQE V+++ + RN++ + + G+ ++ P +G P+L D +G +G V
Sbjct: 261 VAKGCYRGQETVAKVHNVGKPPRNMVL---LHLDGSQEIYPETGDPVLRGDRTVGRVGSV 317
Query: 234 -----VGKKALAI 241
+G ALA+
Sbjct: 318 AQHHELGPIALAL 330
>gi|221140043|ref|ZP_03564536.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|269941027|emb|CBI49411.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|302751368|gb|ADL65545.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|329314214|gb|AEB88627.1| Aminomethyltransferase [Staphylococcus aureus subsp. aureus T0131]
Length = 363
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|15924527|ref|NP_372061.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu50]
gi|15927117|ref|NP_374650.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus N315]
gi|21283218|ref|NP_646306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MW2]
gi|49486373|ref|YP_043594.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651931|ref|YP_186435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus COL]
gi|87160187|ref|YP_494193.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88195343|ref|YP_500147.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148268021|ref|YP_001246964.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus JH9]
gi|150394088|ref|YP_001316763.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus JH1]
gi|151221653|ref|YP_001332475.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979855|ref|YP_001442114.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509765|ref|YP_001575424.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253314906|ref|ZP_04838119.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. CF-Marseille]
gi|253732190|ref|ZP_04866355.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253733214|ref|ZP_04867379.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus TCH130]
gi|255006323|ref|ZP_05144924.2| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu50-omega]
gi|257793613|ref|ZP_05642592.1| glycine cleavage system T protein [Staphylococcus aureus A9781]
gi|258411087|ref|ZP_05681367.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9763]
gi|258420109|ref|ZP_05683064.1| glycine cleavage system T protein [Staphylococcus aureus A9719]
gi|258437369|ref|ZP_05689353.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9299]
gi|258443575|ref|ZP_05691914.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A8115]
gi|258446782|ref|ZP_05694936.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6300]
gi|258448696|ref|ZP_05696808.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6224]
gi|258451194|ref|ZP_05699229.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A5948]
gi|258453513|ref|ZP_05701491.1| glycine cleavage system T protein [Staphylococcus aureus A5937]
gi|262049119|ref|ZP_06021996.1| aminomethyltransferase [Staphylococcus aureus D30]
gi|262051200|ref|ZP_06023424.1| aminomethyltransferase [Staphylococcus aureus 930918-3]
gi|269203166|ref|YP_003282435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus ED98]
gi|282893038|ref|ZP_06301272.1| glycine cleavage system T protein [Staphylococcus aureus A8117]
gi|282924785|ref|ZP_06332452.1| glycine cleavage system T protein [Staphylococcus aureus A9765]
gi|282929008|ref|ZP_06336595.1| glycine cleavage system T protein [Staphylococcus aureus A10102]
gi|284024596|ref|ZP_06378994.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 132]
gi|294848567|ref|ZP_06789313.1| glycine cleavage system T protein [Staphylococcus aureus A9754]
gi|295406659|ref|ZP_06816464.1| glycine cleavage system T protein [Staphylococcus aureus A8819]
gi|296275107|ref|ZP_06857614.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MR1]
gi|297207744|ref|ZP_06924179.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245758|ref|ZP_06929623.1| glycine cleavage system T protein [Staphylococcus aureus A8796]
gi|300911825|ref|ZP_07129268.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|54037178|sp|P64225|GCST_STAAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54037179|sp|P64226|GCST_STAAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54041304|sp|P64224|GCST_STAAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56748970|sp|Q6G929|GCST_STAAS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|61213198|sp|Q5HFM2|GCST_STAAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122539427|sp|Q2FY33|GCST_STAA8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123485681|sp|Q2FGI5|GCST_STAA3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221573|sp|A7X2S3|GCST_STAA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|172048902|sp|A6QH81|GCST_STAAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039476|sp|A6U208|GCST_STAA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039477|sp|A5IT65|GCST_STAA9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039478|sp|A8Z476|GCST_STAAT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|13701335|dbj|BAB42629.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus N315]
gi|14247308|dbj|BAB57699.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204658|dbj|BAB95354.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MW2]
gi|49244816|emb|CAG43270.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286117|gb|AAW38211.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus COL]
gi|87126161|gb|ABD20675.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202901|gb|ABD30711.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147741090|gb|ABQ49388.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus JH9]
gi|149946540|gb|ABR52476.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150374453|dbj|BAF67713.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721990|dbj|BAF78407.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368574|gb|ABX29545.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723979|gb|EES92708.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253728754|gb|EES97483.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus TCH130]
gi|257787585|gb|EEV25925.1| glycine cleavage system T protein [Staphylococcus aureus A9781]
gi|257840237|gb|EEV64701.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9763]
gi|257843820|gb|EEV68214.1| glycine cleavage system T protein [Staphylococcus aureus A9719]
gi|257848574|gb|EEV72562.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9299]
gi|257850981|gb|EEV74924.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A8115]
gi|257854357|gb|EEV77306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6300]
gi|257857974|gb|EEV80863.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6224]
gi|257861249|gb|EEV84062.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A5948]
gi|257864244|gb|EEV86994.1| glycine cleavage system T protein [Staphylococcus aureus A5937]
gi|259160837|gb|EEW45857.1| aminomethyltransferase [Staphylococcus aureus 930918-3]
gi|259162788|gb|EEW47353.1| aminomethyltransferase [Staphylococcus aureus D30]
gi|262075456|gb|ACY11429.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus ED98]
gi|282589415|gb|EFB94506.1| glycine cleavage system T protein [Staphylococcus aureus A10102]
gi|282592792|gb|EFB97798.1| glycine cleavage system T protein [Staphylococcus aureus A9765]
gi|282764356|gb|EFC04482.1| glycine cleavage system T protein [Staphylococcus aureus A8117]
gi|283470815|emb|CAQ50026.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ST398]
gi|285817219|gb|ADC37706.1| Aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus 04-02981]
gi|294824593|gb|EFG41016.1| glycine cleavage system T protein [Staphylococcus aureus A9754]
gi|294968406|gb|EFG44430.1| glycine cleavage system T protein [Staphylococcus aureus A8819]
gi|296887761|gb|EFH26659.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177409|gb|EFH36661.1| glycine cleavage system T protein [Staphylococcus aureus A8796]
gi|300886071|gb|EFK81273.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|312829926|emb|CBX34768.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129814|gb|EFT85804.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS03]
gi|315198769|gb|EFU29097.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS01]
gi|320140578|gb|EFW32432.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144115|gb|EFW35884.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323440434|gb|EGA98146.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus O11]
gi|323443208|gb|EGB00826.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus O46]
gi|329727485|gb|EGG63941.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21172]
gi|329728484|gb|EGG64921.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21189]
gi|329730824|gb|EGG67202.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21193]
Length = 363
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|258423190|ref|ZP_05686083.1| glycine cleavage system T protein [Staphylococcus aureus A9635]
gi|257846640|gb|EEV70661.1| glycine cleavage system T protein [Staphylococcus aureus A9635]
Length = 363
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|49483786|ref|YP_041010.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257425662|ref|ZP_05602086.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428323|ref|ZP_05604721.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430960|ref|ZP_05607340.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433649|ref|ZP_05610007.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus E1410]
gi|257436562|ref|ZP_05612606.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M876]
gi|282904119|ref|ZP_06312007.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905946|ref|ZP_06313801.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282911175|ref|ZP_06318977.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914344|ref|ZP_06322130.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M899]
gi|282919313|ref|ZP_06327048.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C427]
gi|282924638|ref|ZP_06332306.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C101]
gi|283958301|ref|ZP_06375752.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293503418|ref|ZP_06667265.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510435|ref|ZP_06669141.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M809]
gi|293530975|ref|ZP_06671657.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M1015]
gi|295428115|ref|ZP_06820747.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590919|ref|ZP_06949557.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|56749024|sp|Q6GGG2|GCST_STAAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|49241915|emb|CAG40609.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271356|gb|EEV03502.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275164|gb|EEV06651.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278390|gb|EEV09026.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281742|gb|EEV11879.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus E1410]
gi|257283913|gb|EEV14036.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M876]
gi|282313473|gb|EFB43868.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C101]
gi|282317123|gb|EFB47497.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C427]
gi|282321525|gb|EFB51850.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M899]
gi|282324870|gb|EFB55180.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282331238|gb|EFB60752.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595737|gb|EFC00701.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C160]
gi|283790450|gb|EFC29267.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920243|gb|EFD97309.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291095084|gb|EFE25349.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466799|gb|EFF09319.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M809]
gi|295128473|gb|EFG58107.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575805|gb|EFH94521.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|312437995|gb|ADQ77066.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195438|gb|EFU25825.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS00]
Length = 363
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|302333213|gb|ADL23406.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 363
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D +
Sbjct: 52 VSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+L ++ + + + +L +K + +V E+Q ++
Sbjct: 112 LLVVNAANTEKDFNWILKHKEKFDV--EVQNVS 142
>gi|255528029|ref|ZP_05394865.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|255508268|gb|EET84672.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 370
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F
Sbjct: 51 VSHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP 96
L I+ D ++ +K +V II I P
Sbjct: 111 YLVINAGNIDKDFKWMMDHKDNLDVDIINISP 142
Searching..................................................done
Results from round 2
>gi|254780591|ref|YP_003065004.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040268|gb|ACT57064.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter asiaticus str. psy62]
Length = 273
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI
Sbjct: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF
Sbjct: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL
Sbjct: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA
Sbjct: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK
Sbjct: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
>gi|315121784|ref|YP_004062273.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495186|gb|ADR51785.1| aminomethyltransferase protein (glycine cleavage) [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 271
Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats.
Identities = 189/271 (69%), Positives = 229/271 (84%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M SVYLS+QSFIKV GKSA FLQ IITAD+ +LP+ +ARGSA+LTPQGKIL YFLISKI
Sbjct: 1 MPSVYLSSQSFIKVRGKSASTFLQGIITADITSLPFDVARGSALLTPQGKILFYFLISKI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
EED F+LEI++ +RDS I+KLLFYKLRS+V +E+QPING+ LSWNQE ++ SFIDERF
Sbjct: 61 EEDVFVLEINKLQRDSFIEKLLFYKLRSDVALEVQPINGITLSWNQEQAPTSPSFIDERF 120
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
SIA +LLHRTWG+NE+ SD K YHELRIN+GIV+P DF PSTIFPHDALMDL+ GIS
Sbjct: 121 SIAGILLHRTWGYNEESTSDPKEYHELRINYGIVEPIPDFPPSTIFPHDALMDLVKGISF 180
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TKGCY+GQEVVSR+QHRNI+RKRP+IITG + LP +GS + D+ +IGTLG++VG+KALA
Sbjct: 181 TKGCYVGQEVVSRMQHRNIVRKRPIIITGYNALPANGSSLFVDNTKIGTLGIIVGEKALA 240
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IARIDKV +AI+K MALT G++V + P W
Sbjct: 241 IARIDKVSNAIEKNMALTADGIKVTITLPPW 271
>gi|190891087|ref|YP_001977629.1| aminomethyltransferase (glycine cleavage) protein [Rhizobium etli
CIAT 652]
gi|190696366|gb|ACE90451.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli CIAT 652]
Length = 290
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLAADEARPGALLTPQGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++E D +RD+L+ +L YKLR+ V + G+ + W ++ + F D RF
Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGISVCWGEDTDGVSLGFRDSRF 127
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L R G + A + Y LRI HGI +DF FPHD LMDL G+S
Sbjct: 128 TKAGLTLTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFSLQDAFPHDVLMDLNGGLSF 185
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G LA
Sbjct: 186 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVDGGSGLA 245
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ +G L G V + P W
Sbjct: 246 IVRIDRAGAAMAEGTPLLAGGTAVSLTLPQW 276
>gi|86357042|ref|YP_468934.1| putative aminomethyltransferase protein (glycine cleavage)
[Rhizobium etli CFN 42]
gi|86281144|gb|ABC90207.1| putative aminomethyltransferase protein (glycine cleavage)
[Rhizobium etli CFN 42]
Length = 281
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 4/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F++ +
Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIVSLAPDEARPGALLTPQGKILFDFMVWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D ++LE D +RD+L+ +L Y+LR+ V + QP NG+ + W ++ + D RF
Sbjct: 60 DGDGYLLETDAGQRDALLKRLTMYRLRAAVTLTTQPENGITVCWGEDADRIGGA-RDSRF 118
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A V L R G + + A + Y LRI HGIV +DF FPHD LMDL G+S
Sbjct: 119 AKAGVPLRRRAGRHGEDAPSL--YDSLRIRHGIVTSGSDFSLQDAFPHDVLMDLNGGLSF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +G LG V G LA
Sbjct: 177 KKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPQAGTEITAAGKPVGALGSVEGGSGLA 236
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ +G L V + P W
Sbjct: 237 IVRIDRAGAAMAEGTPLLAGQTPVSLALPPW 267
>gi|319784488|ref|YP_004143964.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170376|gb|ADV13914.1| folate-binding protein YgfZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 286
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 142/276 (51%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+
Sbjct: 1 MPCAQLKDRALISVSGPDAEHFLQNILTTDLDILAPGEAKPGALLTPQGKILFDFLISRT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
E+ F LE D + +L YKLR+ V I V ++W E T S S + D
Sbjct: 61 GENAFRLECRADISDDFVRRLTLYKLRAKVEITKSDQAFVTVAWGHESTPSQSDSTAAAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF V R++G ++ D+ + RI GI + +D+ FPHD L+D G
Sbjct: 121 TRFPKGAVT--RSYGETDEPG-DLAAWQAFRIVGGIAESGSDYQLGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
I KGCY+GQEVVSR+QHR R+R +I + LP G+ + +GTLG V
Sbjct: 178 IGFKKGCYVGQEVVSRMQHRGTARRRVLIASADRPLPAPGTELTVAGRPVGTLGSTVDTT 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V + + P W K
Sbjct: 238 GLAIARIDRVKAALDAGQPIMAGDVPLTLAIPGWAK 273
>gi|241203903|ref|YP_002974999.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857793|gb|ACS55460.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 284
Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats.
Identities = 110/273 (40%), Positives = 150/273 (54%), Gaps = 5/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLFVSGAEAQSFLQNLITTDITALGPDEARPGALLTPQGKILFDFMIWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118
+ D +++E D +RD L+ +L YKLR+ V + GV +SW++ E + D
Sbjct: 60 DGDGYMIETDAGQRDGLLKRLTMYKLRAAVTLSPSTEEGVTVSWDEGAEGVRESQGARDS 119
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF+ A V L R G + A + Y LRI+HGIV +DF FPHD LMD G+
Sbjct: 120 RFAKAGVTLTRRAGRHGDGAEVL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFNGGL 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G
Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPGTGTEITAAGKPVGTLGSVEGGNG 237
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ A+ G L V P W
Sbjct: 238 LAIVRIDRAGAAMAAGTPLLAGDTPVSLVLPAW 270
>gi|209548616|ref|YP_002280533.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534372|gb|ACI54307.1| folate-binding protein YgfZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 284
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 110/273 (40%), Positives = 149/273 (54%), Gaps = 5/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+++L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQ- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDE 118
+ D + +E D +RD L+ +L YKLR+ V + + +GV +SW + E + D
Sbjct: 60 DGDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDS 119
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
RF+ A V L R G + + Y LRI HGIV DF FPHD LMD G+
Sbjct: 120 RFAKAGVTLIRQPGKHGD--GEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGL 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG V G
Sbjct: 178 SFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHG 237
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ AI G L V P W
Sbjct: 238 LAIVRIDRAGAAIAAGTPLLAGETPVSLVLPQW 270
>gi|13476462|ref|NP_108032.1| hypothetical protein mll7789 [Mesorhizobium loti MAFF303099]
gi|14027223|dbj|BAB54177.1| mll7789 [Mesorhizobium loti MAFF303099]
Length = 286
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 105/276 (38%), Positives = 147/276 (53%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ TL + A+LTPQGKIL FLIS+
Sbjct: 1 MPFALLKDRALISVSGPDAEHFLQNILTTDLDTLGAGETKPGALLTPQGKILFDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---SSFID 117
E+ F LE D + +L+ YKLR+ V I + V ++W +E S ++F D
Sbjct: 61 GENAFRLECRADISDDFVRRLMLYKLRAKVEIAKSEQSLVAVAWGKESIASENDSTAFAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+RF+ V RT+ A DI + RI HG+ + D+ FPHD L+D G
Sbjct: 121 KRFAKESVT--RTYAGIAD-AGDIAAWQAFRIAHGMAESGADYALGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEVVSR+QHR R+R +I+ LP G+ + + +GTLG G
Sbjct: 178 VGFKKGCYVGQEVVSRMQHRGTARRRVLIVQAGLALPAPGTELTVEGRPVGTLGSSAGDI 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V V+ + P W K
Sbjct: 238 GLAIARIDRVKVALDAGQPILAGDVPVRLAIPAWAK 273
>gi|116251291|ref|YP_767129.1| aminomethyltransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115255939|emb|CAK07020.1| putative aminomethyltransferase [Rhizobium leguminosarum bv. viciae
3841]
Length = 287
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 106/276 (38%), Positives = 147/276 (53%), Gaps = 8/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G FLQ +IT D+ L AR A+LTPQGKIL F+I +
Sbjct: 1 MPAVFLKDRSLLFVSGAETQSFLQNLITTDIAALGADEARPGALLTPQGKILFDFVIWR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-----SF 115
+ + +++E D +RD L+ +L YKLR+ V + GV + W ++ S
Sbjct: 60 DGEGYMIETDAGQRDGLLKRLTMYKLRAAVTLAPSTEEGVTVCWGEDADGSQGVRGSQGA 119
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D RF+ A + L R G + + Y LRI+HGIV +DF FPHD LMD
Sbjct: 120 RDSRFAKAGITLIRRPGKHGDGKEAL--YDALRISHGIVTSGSDFALQDAFPHDVLMDFN 177
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
G+S KGCY+GQEVVSR+QHR R+R + ++ DLP +G+ I +GTLG V G
Sbjct: 178 GGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATDLPGTGTEITAAGKPVGTLGSVDG 237
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LAI RID+ A+ G L V P W
Sbjct: 238 GNGLAIVRIDRAGAAMAAGTPLLAGNTPVSLVLPAW 273
>gi|325292432|ref|YP_004278296.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium sp. H13-3]
gi|325060285|gb|ADY63976.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium sp. H13-3]
Length = 282
Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats.
Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 5/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+++ I+V G A FL +ITADV LP AR SA+LTPQGKIL FLI++
Sbjct: 1 MPSAFLADRRLIRVSGTGAEEFLNNLITADVENLPQGEARASALLTPQGKILFDFLIARD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++E +++D+L+ +L YKLR+ V ++ +PI GV + W++ + + D RF
Sbjct: 61 GPD-YLIESGAAEQDALLRRLTMYKLRAPVDLKAEPIEGVSVFWSE--SVPEAGAKDGRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L R G + + DI Y LRI HGI + D+ FPHD LMD+ +G+S
Sbjct: 118 AKAGINLFRVPGASA--SGDITAYDALRIEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQEVVSR++HR R+R + ++ LP +G+ I + +G LG V G LA
Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSAESALPATGTEITVNGKPVGALGTVCGNTGLA 235
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I R D+V A+ L V V + P W
Sbjct: 236 IVRTDRVADALASATPLIAENVPVTVALPAW 266
>gi|154245363|ref|YP_001416321.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
gi|154159448|gb|ABS66664.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
Length = 292
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M VYL+++ I+ G A FL +IT +V T+ AR A+LTPQGKI+ FL
Sbjct: 1 MPVVYLTDRVLIRATGPEASKFLHGVITCNVQTMATGDARYGALLTPQGKIISDFLFYAE 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F+ ++ + + L+ +L F++LR+ V V + + + D R
Sbjct: 61 GDDAFLFDVPAERAEDLLKRLTFHRLRAKVTFTKADDLAVAAVFGDAAEVPEGALYPDPR 120
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ L + ++SD Y RI GI DF FPH+A MD L G+
Sbjct: 121 LAALGQRLVLPLTAAQALSSDPALYEAHRIALGIPKGGPDFTYGDTFPHEADMDQLGGVD 180
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEVVSR++HR+ R R + + L +G I D +G + V + +
Sbjct: 181 FKKGCYVGQEVVSRMEHRSTPRNRLVEVLFDTPL-ATGQEITAGDKSVGQVLSVTDGRGI 239
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
A R+D+ + A G+ L V V+ P W
Sbjct: 240 ATVRLDRANDAKTDGVPLLAGEVPVELRRPDW 271
>gi|316932611|ref|YP_004107593.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1]
gi|315600325|gb|ADU42860.1| folate-binding protein YgfZ [Rhodopseudomonas palustris DX-1]
Length = 293
Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +LS++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MQAAFLSDRGVLKISGPDARHLLNGLVTTDLTKLAPGAGRFGALLTPQGKIVADFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E F
Sbjct: 61 PAEDDGGFLLDCPKPLTEALATKLKFYKLRAKVLIENLSDRLGVLALWGGEPPQPPEMGF 120
Query: 116 IDERFS-------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T + Y RI G+ DF + FPH
Sbjct: 121 RDPRGEQLGWRILVPEILATATAEALGATMATASAYEAHRIGCGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLHGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGAAPQPGSEITAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
T+G + LA+ RID+V A + + L+ GV + + P
Sbjct: 241 TMGSSASGRGLALLRIDRVAEAREASVPLSAGGVPLLIADP 281
>gi|92119419|ref|YP_579148.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
hamburgensis X14]
gi|91802313|gb|ABE64688.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
hamburgensis X14]
Length = 293
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 143/282 (50%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + R A+LTPQGKI FLI++
Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEA 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
F+++ S SL KL FYKLR+ V ++ I GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPDLTF 120
Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + R + Y RI G+ TDF+ FPH
Sbjct: 121 ADPRSDRLGWRILAPEELATRAATVIGAELVESADYDAHRIAAGVPSGGTDFMFGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCY+GQEVVSR++HR R R + + D P +G+ I+ D +G
Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVLLDDGAPDAGTAIVAADKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G + LA+ R+D+ AI+ G+ALT G+ ++ + P
Sbjct: 241 TMGSSAASQGLALLRLDRAADAIEAGIALTAGGIPIRVADPD 282
>gi|254501842|ref|ZP_05113993.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222437913|gb|EEE44592.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 296
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 97/283 (34%), Positives = 149/283 (52%), Gaps = 12/283 (4%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L +++ I+V G A FLQ ++TAD+ L + SA+LTPQGKIL FLI K +
Sbjct: 5 NIAPLHDRALIRVSGPDAEHFLQNLVTADIDELADPGSTLSALLTPQGKILFDFLIYK-Q 63
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-WNQEHTFSNSS---FID 117
++++ + L+ +L FY+LR+ V +E + V + W + + +N + ID
Sbjct: 64 NSGYLIDAPKETSADLLKRLTFYRLRAKVDLEAAGEDVCVFALWGGDLSDTNGAELVVID 123
Query: 118 ERFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
R + + G + A+ D++ Y R+ G+ + DF S IFPHDA MD
Sbjct: 124 PRLAALGQRVVGPTGFADASAATVKDLEAYDAHRVALGVPEGLKDFAYSDIFPHDADMDQ 183
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
L G+S KGCY+GQEVVSR+ HR RKR + I LP G+ ++ +D +G LG
Sbjct: 184 LGGVSFKKGCYVGQEVVSRVHHRGTARKRFIQIEAAGALPEKGTSVIANDKSVGELGSST 243
Query: 235 ----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+A+ R+DKV AI+ G+ LT V + P W +
Sbjct: 244 MIDGQAFGVALLRLDKVHQAIENGVPLTCGDVAITVKLPDWAE 286
>gi|218661628|ref|ZP_03517558.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli IE4771]
Length = 278
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 104/272 (38%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTPQGKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDITSLASDEARPGALLTPQGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
+ D +++E D +RD L+ +L YKLR+ V + + GV + W ++ +
Sbjct: 68 DGDGYMIETDAGQRDGLMKRLTMYKLRAAVTLALVAEEGVSVCWGEDEDGIRDAESVRDS 127
Query: 115 --FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
D RF+ A + L R G + A + Y LRI HGI +DF FPHD L+
Sbjct: 128 RGVRDSRFAKAGIALTRRPGRHGDGAEAL--YDALRIAHGIAISGSDFALQDAFPHDVLL 185
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +G+ I +GTLG
Sbjct: 186 DLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGTGTEITAAGKPVGTLGS 245
Query: 233 VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
V G LAI RID+ A+ +G L V
Sbjct: 246 VAGGSGLAIVRIDRAGAAMAEGTPLLAGETPV 277
>gi|75676888|ref|YP_319309.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
winogradskyi Nb-255]
gi|74421758|gb|ABA05957.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
winogradskyi Nb-255]
Length = 293
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI + FLI++
Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKITVDFLITEA 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
F+++ L KL FYKLR+ V +E + GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLPLAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120
Query: 116 IDERFSIADV-------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R L R + Y RI G+ DF FPH
Sbjct: 121 ADPRSDRLGWRSLVPEELAARAATVIGAELVESADYEAHRIRAGVPSGGADFNFGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + +G
Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARNRIVRVHLDGGAPEPGTAVVAGEKPVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G + LA+ R+D+ AI+ G+ LT GV ++ + P
Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGGVPIRVAEPD 282
>gi|312113562|ref|YP_004011158.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100]
gi|311218691|gb|ADP70059.1| folate-binding protein YgfZ [Rhodomicrobium vannielii ATCC 17100]
Length = 290
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 7/277 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S L +++ +KV G + FL +IT DV L AR S +L+PQGKIL F + +
Sbjct: 1 MPSTLLPDRAVLKVTGDDHVSFLHGLITNDVEHLGNDEARFSGLLSPQGKILFDFFVVRH 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF-----SNSS 114
+ F ++ +++ D+L+ +L YKLR+ V + ++ W ++ +
Sbjct: 61 GDTHF-IDAPKAQADALLKRLTMYKLRAKVDVADVSDKTAAGAIWGEDAAAWAKANGGLA 119
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ D R + + + + + Y RI + + D+ S FPH+A D
Sbjct: 120 YADPRLPELGSRILISAAAAPAVTATPEDYAAHRIALAVPEGGADYAFSDAFPHEACFDF 179
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
L+G+ KGC++GQEVVSR+QHR R R + +T + DLP G+ I+ +G LG V
Sbjct: 180 LHGMDFKKGCFVGQEVVSRMQHRGTARTRVLSVTASADLPEGGADIVAGGFPVGRLGSVY 239
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G +A+ARID+V A+ KG+ALTV V + PHW
Sbjct: 240 GAHGVALARIDRVRDALAKGLALTVGAADVDLTVPHW 276
>gi|222085402|ref|YP_002543932.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium
radiobacter K84]
gi|221722850|gb|ACM26006.1| aminomethyltransferase protein (glycine cleavage) [Agrobacterium
radiobacter K84]
Length = 279
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++SF++V G A PFL +IT D+++L AR A+LTPQGKIL F+IS+
Sbjct: 1 MPAVFLRDRSFLRVTGAEAEPFLHNLITTDLVSLGTDEARPGALLTPQGKILFDFMISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ F+LE D ++RD L+ +L Y+LR+ V + GV ++W D RF
Sbjct: 60 DGPGFLLETDTAQRDGLLKRLTMYRLRAPVDFAVGETEGVTVAWGDNVA---EGPRDSRF 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + L RT GH+ A + Y LRI +GI DF FPHD L+DL G+
Sbjct: 117 AKAGIALTRTSGHHGDDAEAL--YEALRIANGIAVSGQDFALQDAFPHDVLLDLNGGLGF 174
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR+ R+R +I+ G+ DLP SG+ + IGTLG + G LA
Sbjct: 175 RKGCYVGQEVVSRMQHRSTARRRVVIVIGSADLPASGTELTAGGKPIGTLGSIEGANGLA 234
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ AI G + G V + P W
Sbjct: 235 IVRIDRAGEAIAAGTPILAAGHEVSVALPVW 265
>gi|85714363|ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
sp. Nb-311A]
gi|85698810|gb|EAQ36679.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter
sp. Nb-311A]
Length = 293
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ +KV G A FL ++T DV + + R A+LTPQGKI+ FLI++
Sbjct: 1 MKAAFLPDRGVVKVIGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKIIFDFLITEA 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
F+++ + L KL FYKLR+ V +E + GV+ +W+ E + +F
Sbjct: 61 QPGHGGGFLIDCPLALAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120
Query: 116 IDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + + A+ + Y RI GI DF FPH
Sbjct: 121 ADPRSDKLGWRILAPEELAGRAATVIGAELVESADYEAHRIAAGIPSGGNDFKFGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCY+GQEVVSR++HR R R + + P G+ ++ + +G
Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVRLDAGAPEPGTAVVAGEKAVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G + LA+ R+D+ AI+ G+ LT + + + P
Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGDIPIHVAEPD 282
>gi|192289666|ref|YP_001990271.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1]
gi|192283415|gb|ACE99795.1| folate-binding protein YgfZ [Rhodopseudomonas palustris TIE-1]
Length = 293
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F
Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120
Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T Y RI G+ DF + FPH
Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G + LA+ RID+V A + + L+ GV + + P
Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPD 282
>gi|39934143|ref|NP_946419.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris CGA009]
gi|39647991|emb|CAE26511.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris CGA009]
Length = 293
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ +K+ G A L ++T D+ L R A+LTPQGKI+ FLI+++
Sbjct: 1 MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ + ++L KL FYKLR+ V+IE + GV+ W E + F
Sbjct: 61 PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF 120
Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L T Y RI G+ DF + FPH
Sbjct: 121 RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + +T P GS I D +G
Sbjct: 181 EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEINAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G + LA+ RID+V A + + L+ GV + + P
Sbjct: 241 TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLAIADPD 282
>gi|148253866|ref|YP_001238451.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. BTAi1]
gi|146406039|gb|ABQ34545.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. BTAi1]
Length = 294
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 13/280 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ ++V G A FL + T DV L AR A+LTPQGKI++ FL++++
Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLFTTDVSKLHPGEARFGALLTPQGKIIVDFLVTQV 60
Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSS 114
+ F+L++ R+ +L DKL YKLR+ V + + GV+ W+ S
Sbjct: 61 PASNGGERFLLDVPRALAQALTDKLNVYKLRAKVAVSNLSDQLGVIAVWDGAVGATPEPS 120
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFP 167
F D R + + G + IA + Y RI+ + DF+ FP
Sbjct: 121 FTDPRHESLGARVIASQGALQDIAGGLGAEVVTADAYEAHRIDCAVPRGGLDFMYGDAFP 180
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
H+ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL + +
Sbjct: 181 HETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGEKSV 240
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
GT+G +K +A+ RID+ A++ G LT G+ ++ +
Sbjct: 241 GTMGSASQQKGMALLRIDRATEAMEAGTPLTAGGLTLRVA 280
>gi|163760578|ref|ZP_02167659.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea
phototrophica DFL-43]
gi|162282193|gb|EDQ32483.1| glycine cleavage system T protein, aminomethyltransferase [Hoeflea
phototrophica DFL-43]
Length = 272
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 3/260 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A FLQ +ITA+V TL + +A+LTPQGKIL FLIS+ E F L+ID
Sbjct: 1 MHVDGAEAEHFLQNLITANVETLKSGCVQAAALLTPQGKILFDFLISRAPEGGFHLDIDG 60
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
D + +L YKLR+NV + Q V+ W+Q +++ ID RF + R +
Sbjct: 61 KLTDGFMKRLTLYKLRANVSFDRQADTPVIAGWDQPR--PDAALIDNRFPET-AGVWRLY 117
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
G N + + + LRI +G+ + +D+ S FPHD LMD +G+ KGCY+GQEVV
Sbjct: 118 GSNANLGAGQADWDSLRIAYGVAESGSDYALSDAFPHDILMDKNHGVDFRKGCYVGQEVV 177
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAI 251
SR+ HR R+R + ++G LPPSG+ I +G LG V G +ALAI RID+V A+
Sbjct: 178 SRMHHRGTARRRVVTVSGEATLPPSGTSIQAGTKPVGELGTVSGDRALAIVRIDRVADAM 237
Query: 252 KKGMALTVHGVRVKASFPHW 271
LT G+ V + P W
Sbjct: 238 AAEHQLTADGIAVTLTLPDW 257
>gi|91975718|ref|YP_568377.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB5]
gi|91682174|gb|ABE38476.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB5]
Length = 293
Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI--- 57
M + +L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ FLI
Sbjct: 1 MKAAFLPDRGVIKISGADARHLLNGLVTTDLTLLKPGLGRFGALLTPQGKIVADFLITEG 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHT-FSNSSF 115
+ ++ F+++ ++ L DKL FYKLR+ V+IE + GV+ +W +F
Sbjct: 61 AAADDGGFLIDCPKALAQPLADKLKFYKLRAKVLIENLSDRLGVLAAWGGAPAETPELAF 120
Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + +T D+ Y RI G DF FPH
Sbjct: 121 ADPRHDDLGWRIITPELLAQKTAAAIGAELVDVAAYEAHRIACGAPAGGVDFAYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ MD L+G+ KGCYIGQEVVSR+ HR R R + + P +G+ I+ + +G
Sbjct: 181 ESNMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLLDGAGPEAGAEIIAGEKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G V LA+ RID+V A + ++ G+ ++ + P
Sbjct: 241 TMGSSVDGHGLALLRIDRVADARDASLPISAGGITLRLADPD 282
>gi|158422025|ref|YP_001523317.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571]
gi|158328914|dbj|BAF86399.1| glycine cleavage T protein [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 4/274 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK- 59
M+ +L ++ + V G A FL ++T ++ +L AR A+L PQGKI+ FLI
Sbjct: 1 MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP 60
Query: 60 -IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFID 117
+T +L++ ++ + L+ + Y+LR+NV E Q + +V W E +F D
Sbjct: 61 VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R E + D Y RI GI + DFL FPH+A MD L G
Sbjct: 121 PRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQLGG 180
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCYIGQEVVSR QHR I R R + P SG+ I + +G +G + G +
Sbjct: 181 VDFKKGCYIGQEVVSRTQHRGIARTRTV-AALLAGAPESGTEIKAGEKTVGRIGSIAGGQ 239
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+A+ R+D+ A G+ L V V P W
Sbjct: 240 GIALVRLDRAAEAKASGLPLLAGDVEVTLKAPDW 273
>gi|260462304|ref|ZP_05810512.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075]
gi|259031798|gb|EEW33066.1| folate-binding protein YgfZ [Mesorhizobium opportunistum WSM2075]
Length = 286
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/276 (35%), Positives = 137/276 (49%), Gaps = 6/276 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ I V G A FLQ I+T D+ L A+ A+LTPQGKIL FLIS+
Sbjct: 1 MPFTLLKDRALISVSGPDAEHFLQNILTTDLDVLGESEAKPGALLTPQGKILFDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
E+ LE D + +L+ YKLR+ V I V ++W +E S + D
Sbjct: 61 GENALRLECRADISDDFVRRLMLYKLRAKVEIAKPEQALVSVAWGKESIALQSDSTAVAD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + R++ + + RI HGI + D+ FPHD L+D G
Sbjct: 121 RRF--GGESVTRSYAGAAQADD-GAAWQTFRIAHGIAESGADYALGDAFPHDVLLDETGG 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEVVSR+QHR R+R +I+ LP +G+ + + +G LG G
Sbjct: 178 VGFRKGCYVGQEVVSRMQHRGTARRRVLIVQSELPLPVAGTELTVEGRPVGALGSSAGTT 237
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAIARID+V A+ G + V V P W K
Sbjct: 238 GLAIARIDRVKAALDAGRPILAGDVPVTLIIPTWAK 273
>gi|15888395|ref|NP_354076.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium tumefaciens str. C58]
gi|15156077|gb|AAK86861.1| glycine cleavage system T protein, aminomethyltransferase
[Agrobacterium tumefaciens str. C58]
Length = 282
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 104/271 (38%), Positives = 156/271 (57%), Gaps = 5/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MSS +L+++ I+V G A FL +ITAD+ LP R SA+LTPQGKIL FLI +
Sbjct: 1 MSSAFLADRRLIRVSGTGAEEFLNNLITADIENLPEGETRASALLTPQGKILFDFLIWRD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++E +++D+L+ +L YKLR+ V ++ + + G+ + W ++ + + D RF
Sbjct: 61 GRD-YLVETGAAEQDALLRRLTMYKLRAPVELKAETVEGIGVFWG--NSVTEAGVRDGRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A V L R G + Y LR+ HGI + D+ FPHD LMD+ +G+S
Sbjct: 118 AKAGVDLRRVPGASASGE--AAAYEALRVEHGIAESGRDYALQDAFPHDVLMDVNDGVSF 175
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQEVVSR++HR R+R + ++ LP SG+ I + +G LG V G +ALA
Sbjct: 176 KKGCFVGQEVVSRMKHRGTARRRVVTVSADGTLPASGTEITANGKPVGALGTVYGNRALA 235
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I R D+V A+ G L V V + P W
Sbjct: 236 IVRTDRVADALAAGTPLLADNVAVSVALPAW 266
>gi|188584007|ref|YP_001927452.1| folate-binding protein YgfZ [Methylobacterium populi BJ001]
gi|179347505|gb|ACB82917.1| folate-binding protein YgfZ [Methylobacterium populi BJ001]
Length = 285
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 91/272 (33%), Positives = 136/272 (50%), Gaps = 3/272 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLLSRD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+ F L++ + L+ +L Y+LR+ V + P GV +W+ T +++ D R
Sbjct: 61 GGNGFRLDVAAERVPDLVKRLGLYRLRAKVTVAADPTLGVAAAWDGSETAADTVRVRDGR 120
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ + G A++ + YH RI G+ + DF S FPH+ALMD L G+
Sbjct: 121 LPALGERLYFSQGAFSADATE-EDYHAHRIGLGVPEGGRDFALSDAFPHEALMDQLGGVD 179
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + + P G+ + +GT G G +
Sbjct: 180 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPAPGTEVTAGARSLGTTGSAAGHRG 239
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA R+D++ A+ + G P
Sbjct: 240 LATIRLDRLGDALAADEPVRAGGTVAAVGKPD 271
>gi|86748242|ref|YP_484738.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris HaA2]
gi|86571270|gb|ABD05827.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris HaA2]
Length = 293
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 140/282 (49%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ IK+ G A L ++T D+ L + R A+LTPQGKI+ F I++I
Sbjct: 1 MKAALLPDRGVIKISGADARHLLNGLVTTDLTLLEPGLGRFGALLTPQGKIVADFFITEI 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SF 115
++ F+L+ ++ + L KL FYKLR+ V+IE + GV+ W+ +++ +F
Sbjct: 61 AAEDDGGFLLDCPKTLAEPLTTKLKFYKLRAKVLIENLSDRLGVLAVWDGAPAATSAPAF 120
Query: 116 IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + ++L H+T D Y RI G DF FPH
Sbjct: 121 TDPRNDQLGWRIIVPELLAHKTAEAIGAELVDAAAYEAHRIACGAPAGGVDFAYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCYIGQEVVSR+ HR R R + + P GS I D +G
Sbjct: 181 EANMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLIDGAAPQPGSEITAGDKSVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G LA+ RID+V A + + L G+ ++ P
Sbjct: 241 TMGSSADGCGLALLRIDRVADAREASLPLGAAGIALRLVDPD 282
>gi|90425803|ref|YP_534173.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB18]
gi|90107817|gb|ABD89854.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisB18]
Length = 293
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/281 (34%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+N+ +K+ G+ A FL ++T D+ L R A+LTPQGKI+ F ++++
Sbjct: 1 MKSAFLANRGVVKISGEDARHFLNGLVTTDMTKLTPSQGRFGALLTPQGKIVADFFVTEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115
++ F+L+ R L DKL FYKLR+ V++E + GV+ W+ E T + F
Sbjct: 61 PAADDGGFLLDCPRELAQPLADKLKFYKLRAKVLVENLSDRLGVLAIWDGELTTLPEACF 120
Query: 116 IDERFSIADV-------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R L ++T D Y RI+ G DF FPH
Sbjct: 121 ADPRDPKLGWRCLLPVELANKTAEWIGAPLVDAVLYDARRISCGAPAGGVDFRYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+G+ KGCY+GQEVVSR+QHR R R + + P GS +L D +G
Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMQHRGTARTRTVRLGFDGAQPEPGSELLAADKPVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LG + LA+ RID++ A++ AL+ GV V+ P
Sbjct: 241 HLGSLADGVGLALVRIDRLAEAVEAASALSAGGVAVRLLDP 281
>gi|254471836|ref|ZP_05085237.1| glycine cleavage T protein [Pseudovibrio sp. JE062]
gi|211959038|gb|EEA94237.1| glycine cleavage T protein [Pseudovibrio sp. JE062]
Length = 280
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 144/268 (53%), Gaps = 6/268 (2%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64
L+++ +KV G A FLQ +++ DV L + A+LTPQGKIL F + E D
Sbjct: 8 LTSRRLVKVFGDDAKEFLQNLVSCDVSELSATSSAFGALLTPQGKILWDFFVFADESTDG 67
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFSIA 123
F++++ + D+ +L FYKLR+ V +E VV W + + D R +
Sbjct: 68 FLIDVSADELDAFAKRLAFYKLRAKVTVEPADEAVHVVAEWGDD--LPSDKPQDPRLAEM 125
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ + G E+ AS+ YH RI GI DF + +FPHD MD LNG++ +KG
Sbjct: 126 GLR-YIVTGEVEETASE-ADYHAHRIGLGIPQSGQDFQLADVFPHDTDMDSLNGVAFSKG 183
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C+IGQEVVSR++HR RKR + ++ DLP +GS IL + +G+LG G LA+ R
Sbjct: 184 CFIGQEVVSRMKHRGTARKRVIKVSADSDLPATGSDILAGEKSVGSLGSSAGGAGLAMLR 243
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
+D+ A+ G+ L GV + S W
Sbjct: 244 LDRAKAAMDAGVPLMCEGVTLSPSIQAW 271
>gi|146339093|ref|YP_001204141.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. ORS278]
gi|146191899|emb|CAL75904.1| putative glycine cleavage T protein (aminomethyl transferase)
[Bradyrhizobium sp. ORS278]
Length = 294
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 94/286 (32%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L ++ ++V G A FL ++T DV L AR A+LTPQGKI++ FL+++
Sbjct: 1 MKATFLDDRGVVQVSGDDARKFLNGLVTTDVTKLVPGDARFGALLTPQGKIIIDFLVAQA 60
Query: 61 E----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ-EHTFSNSS 114
+ F+L+ R+ +L DKL YKLR+ + + + GV+ WN T + S
Sbjct: 61 PTGDAGERFLLDCPRALAQALADKLNLYKLRAKLTVANLSDQLGVIAVWNGTPATALDLS 120
Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164
F D R D L HR ++A Y RI + DF+
Sbjct: 121 FTDPRH---DGLGHRIIAPQTELAEIATRLGAEVVTADAYEAHRIECTVPRGGLDFMYGD 177
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
FP++ MD L+G+ + KGCY+GQEVVSR+ HR R R + P G+PIL +
Sbjct: 178 AFPYETNMDRLHGVDIGKGCYVGQEVVSRMHHRGTTRTRTAKVLLDGPSPEPGTPILAGE 237
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+GT+G +K LA+ RID+ A++ G LT G+ ++ + P
Sbjct: 238 KTVGTMGSAAAQKGLALLRIDRAAEAMEAGTPLTAGGLTLRIADPD 283
>gi|27377665|ref|NP_769194.1| glycine cleavage system T protein, aminomethyltransferase
[Bradyrhizobium japonicum USDA 110]
gi|27350810|dbj|BAC47819.1| glycine cleavage system T protein, aminomethyltransferase
[Bradyrhizobium japonicum USDA 110]
Length = 293
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 140/282 (49%), Gaps = 12/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L ++ +KV G+ A FL ++T D+ L + R A+LTPQGKI++ FLI+++
Sbjct: 1 MKSAFLPDRGVVKVAGEDARNFLNGLVTTDLDRLKPGLGRFGALLTPQGKIIVDFLITEV 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115
F+++ ++ + L KL FYKLR+ +E + GV+ +W+ + +F
Sbjct: 61 PAGHGGGFLIDCPKALAEGLATKLKFYKLRAKATVENLSDDLGVLAAWDGALAAQPDLAF 120
Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + + D Y RI G+ DF+ S FPH
Sbjct: 121 ADPRHDGLGTRILIPEDLKQKLSDLIGAELVDAAAYEAHRIALGVPRGGLDFMYSDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ IL D +G
Sbjct: 181 ETNMDRLAGVDFDKGCYVGQEVVSRMQHRGTARTRSVKVLLDGPSPEIGAAILAGDKPVG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T+G K +A+ RID+V A+ G LT G+ + + P
Sbjct: 241 TIGSSADGKGIALVRIDRVADALDAGQPLTAGGLALTLAEPE 282
>gi|110633313|ref|YP_673521.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
sp. BNC1]
gi|110284297|gb|ABG62356.1| glycine cleavage T protein (aminomethyl transferase) [Chelativorans
sp. BNC1]
Length = 288
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 4/276 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M SV LS+++ + G A LQ IIT D+ L AR A+LTPQGKIL FLIS+
Sbjct: 1 MPSVELSDRTVLLAAGPDAEALLQNIITTDLSALGQDEARPGALLTPQGKILFDFLISRT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
+D F L+ + +L+ Y+LR+ + I + +SW + S + S +D
Sbjct: 61 GQDGFRLDCRSDLAQDFLKRLMLYRLRAKAELSIDNNAVISVSWGNDSLSSQTDSMSVVD 120
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF A + + R +G ++ ++DI + LR+ HG+ + D+ FPH+ L D G
Sbjct: 121 RRFPEA-LKVARRYGSADEGSADISAWDRLRVEHGVAESGRDYDLGDAFPHEILFDQNGG 179
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ L KGCY+GQEVVSR+ HR R+R +I+ G LP SGS I D IG LG V
Sbjct: 180 VGLKKGCYVGQEVVSRMHHRGTARRRLVIVRGDKALPASGSQITADGRAIGALGTVCDAD 239
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LAI RID+ AI+ G + + P + K
Sbjct: 240 GLAILRIDRAAEAIQAGNPILAGEAALSLKVPAFAK 275
>gi|118589212|ref|ZP_01546618.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia
aggregata IAM 12614]
gi|118437912|gb|EAV44547.1| Glycine cleavage T protein (aminomethyl transferase) [Stappia
aggregata IAM 12614]
Length = 308
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 101/290 (34%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S LS++S I+V G A FLQ ++TAD+ + A A+LTPQGKIL FLI ++
Sbjct: 8 LSYAPLSDRSLIRVGGADAQHFLQNLVTADIDGMKDGGASAGALLTPQGKILFDFLIYRL 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQ----------EHT 109
E ++L+ + L+ +L FY+LR+ V +E+ P N GV+ W+ +
Sbjct: 68 -ESGYLLDAPSATAADLVKRLTFYRLRAKVDLELLPENVGVIALWDDNPEAGKGLDSDVD 126
Query: 110 FSNSSFIDERFSIADVLLH----RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
+ S+ D R + A D+ Y RI+ G+ + D+ S I
Sbjct: 127 GALSAVTDPRLPALGKRIAGPVVELALKLLATAQDLAAYDRHRISMGVPEGLKDYDYSDI 186
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
FPHDA +D L G+S +KGCY+GQEVVSR+ HR RKR + I +D LP G+ I
Sbjct: 187 FPHDADLDQLGGVSFSKGCYVGQEVVSRMHHRGSARKRFVQIESSDALPEKGTDITAGGK 246
Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IG LG G LA+ R+DKV A G L + P W
Sbjct: 247 SIGALGSSALTDDGAVGLALLRLDKVAQAKDNGTPLQCGDAEILVKLPDW 296
>gi|222148091|ref|YP_002549048.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
gi|221735079|gb|ACM36042.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
Length = 279
Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L N++F+KV G A FL ++TAD+ + A SA+LTPQGKIL L+ +
Sbjct: 1 MPAVFLENRAFLKVAGAEAAHFLNNLLTADLGLIEPGQAAPSALLTPQGKILFDMLVYPL 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D ++LE+ ++++L+ +L YKLR+ V + +GV + W+ T +F D RF
Sbjct: 61 A-DGYLLEVASDEQEALLRRLTLYKLRAAVTLTPAEFSGVTVIWDNVPT---GAFQDRRF 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ A + R G DI+ Y LRI G+ + D+ +PHD L+DL G+S
Sbjct: 117 AAAGETVWRVPGRVNSAGDDIRLYTALRIKAGVAEAGLDYPLQDAYPHDVLLDLNGGVSF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+ HR + R+R I++ LP +G+ + D +GTLG V+ LA
Sbjct: 177 KKGCYVGQEVVSRMHHRKMARRRIAIVSADTALPATGTELRADGKPLGTLGTVLDTIGLA 236
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RID+ A+ G + V+ P W
Sbjct: 237 ILRIDRTGDAMANGTPILAGDQAVRLHLPAW 267
>gi|209886048|ref|YP_002289905.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5]
gi|209874244|gb|ACI94040.1| glycine cleavage T protein [Oligotropha carboxidovorans OM5]
Length = 313
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/282 (32%), Positives = 144/282 (51%), Gaps = 13/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +LS++ IKV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I
Sbjct: 23 MKSAFLSDRGVIKVGGEDARHFLNGLVTTNIELVRPGLGRFGALLTPQGKIIADFLVTEI 82
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
F+L+ +S L +L YKLR+ V+IE + GV+ W+ + + +F
Sbjct: 83 PAGHGGGFLLDCPKSLAQPLTARLSIYKLRAKVVIENLSDSLGVLAVWDGQPQMTPDLAF 142
Query: 116 IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + + + + Y RI G DF + FPH
Sbjct: 143 ADPRDNELGWRILVPAELAEKAAAAIGATMTSEADYEAHRIACGAPRGGVDFGYNDAFPH 202
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
DA MD L+G+ KGCYIGQEVVSR+QHR R R + + D+ SG+ ++ + +G
Sbjct: 203 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARNRIVRVGIDGDV-ASGTTVMAGEKTVG 261
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T G G LA+ R+D+V+ AI+ G+A+T G + P
Sbjct: 262 TFGSSAGGHGLALLRVDRVNDAIESGLAVTAEGHALTFVAPQ 303
>gi|218532559|ref|YP_002423375.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4]
gi|218524862|gb|ACK85447.1| folate-binding protein YgfZ [Methylobacterium chloromethanicum CM4]
Length = 284
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|163853701|ref|YP_001641744.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1]
gi|163665306|gb|ABY32673.1| folate-binding protein YgfZ [Methylobacterium extorquens PA1]
Length = 284
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W T + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWEGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|307300928|ref|ZP_07580697.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
gi|307321831|ref|ZP_07601217.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
gi|306892500|gb|EFN23300.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
gi|306903883|gb|EFN34469.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
Length = 282
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 108/271 (39%), Positives = 147/271 (54%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+
Sbjct: 1 MPMVCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF
Sbjct: 60 DGEALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A V + R + + I LRI GI D+ FPHD LMDL G+S
Sbjct: 118 EKAGVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI K A+ VR+ + P W
Sbjct: 238 IVRIDKAGEAIAKSEAILAGDVRLTLTLPAW 268
>gi|328544948|ref|YP_004305057.1| aminomethyltransferase protein (glycine cleavage) [polymorphum
gilvum SL003B-26A1]
gi|326414689|gb|ADZ71752.1| Putative aminomethyltransferase protein (Glycine cleavage)
[Polymorphum gilvum SL003B-26A1]
Length = 295
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 151/286 (52%), Gaps = 14/286 (4%)
Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
M++ L+++ ++V G A FLQ +IT D+ A A+LTPQGKIL FLI
Sbjct: 1 MTAARYALLASRGVVEVGGPEAHHFLQNLITCDMDKAAETGAGYGALLTPQGKILFDFLI 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSS 114
K + + ++L+ R+ L+ +L+FY+LR+ V I + + V + ++ + + S+
Sbjct: 61 LK-DGERYLLDTPRAAVADLVKRLVFYRLRARVEIADRSEDLAVAALWGTDEAPSGAGSA 119
Query: 115 FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
D R + L RT + + RI G+ + DF FP
Sbjct: 120 VRDPRLPVLGFRLVGPREGLARTLAAAGAEDAGEAGWQAHRIRLGVPEAGADFALGDAFP 179
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
HDA MD L+G+S KGCY+GQEVVSR++HR+ R+R + ++G LP +G+PI D +
Sbjct: 180 HDADMDQLSGVSFRKGCYVGQEVVSRMEHRSTARRRVVKVSGQQPLPEAGTPITADGRPV 239
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
GTLG G LA+ R+DKV A+ G++L V + + P W +
Sbjct: 240 GTLGSSTGGDGLALVRLDKVKAALDNGVSLECGAVPLAVALPEWAR 285
>gi|240141126|ref|YP_002965606.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens AM1]
gi|240011103|gb|ACS42329.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens AM1]
Length = 284
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGSDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDGAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGVTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA R+D++ A+ G + G + P + +
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPEFAR 273
>gi|115526383|ref|YP_783294.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisA53]
gi|115520330|gb|ABJ08314.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodopseudomonas palustris BisA53]
Length = 293
Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + +L+++ IK+ G+ A FL ++T D+ R A+LTPQGKI+ FL++++
Sbjct: 1 MKAAFLADRGVIKISGEEARHFLNGLVTTDMTKAEPGQGRFGALLTPQGKIVADFLLTEL 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-HTFSNSSF 115
+ F+++ DR+ L KL FYKLR+ V++E + GV+ W+ E SF
Sbjct: 61 LAEDGGGFLIDCDRALAQPLATKLNFYKLRAKVLVENLSDRLGVLAIWDGEPSPPPEWSF 120
Query: 116 IDERFSIADVLLH-------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R + +T D Y RI G DF FPH
Sbjct: 121 ADPRDASLGWRAPVPVELAAKTAAAIGAEWVDASDYDSHRIACGAPAGGVDFRYGDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A MD L+GI +KGCY+GQEVVSR+ HR R R + I P SGS + +D IG
Sbjct: 181 EANMDKLHGIDFSKGCYVGQEVVSRMHHRGTARTRTVRIAFDGAAPMSGSDMFANDKPIG 240
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LG + + LA+ RIDK+ A+ G L V + ++ P
Sbjct: 241 HLGSITNGQGLALVRIDKLADAVDAGERLHVGEIALRLLDP 281
>gi|227821430|ref|YP_002825400.1| putative aminomethyltransferase protein [Sinorhizobium fredii
NGR234]
gi|227340429|gb|ACP24647.1| putative aminomethyltransferase protein [Sinorhizobium fredii
NGR234]
Length = 282
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ I V GK A LQ ++T D+ L R A+LTPQGKIL FLIS+
Sbjct: 1 MPKLRLDDRVTISVSGKDADALLQGLVTTDIGALADDEVRPGALLTPQGKILFDFLISR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE R + ++L+ +L YKLRS V + + VV+++ +E SS+ D RF
Sbjct: 60 DGEALRLETSRDQAEALLKRLTMYKLRSAVELSLLAPAPVVVAFGEER--PESSYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A + + R + + Y LRI G+ D+ FPHD LMDL G+S
Sbjct: 118 EKAGIPVFRLYREIAGAGAGAADYDRLRIEAGVATAGRDYALQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +I++G LPP+G+ + IG+LG V + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRVVIVSGQALLPPTGTSLSIHGRPIGSLGTVQDRAGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI KG + V V + P W
Sbjct: 238 IVRIDKAGEAIAKGDPILAGDVPVTLTLPGW 268
>gi|150395930|ref|YP_001326397.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
gi|150027445|gb|ABR59562.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
Length = 282
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 107/271 (39%), Positives = 144/271 (53%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M V L ++ I V GK A LQ +IT D+ L R A+LTPQGKIL FL+S+
Sbjct: 1 MPKVCLDGRAIIHVSGKDADTLLQTLITTDIAQLGADEIRPGALLTPQGKILFDFLLSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + LE + ++L+ +L YKLRS V I +Q V + + ++ S+ D RF
Sbjct: 60 DGEALRLETTGDQGEALVKRLTMYKLRSAVEISLQSPAPVTVVFGEDA--PAGSYRDHRF 117
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A V + R + + I + LRI GI D+ FPHD LMDL G+S
Sbjct: 118 EKAGVSVFRLYRDLPSAEAGIADFDALRIAAGIAVAGRDYALQDAFPHDVLMDLNGGLSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R+R +II G LPP+G+ I + IG+LG + LA
Sbjct: 178 RKGCYVGQEVVSRMQHRGTARRRLVIIAGEAALPPTGTSISVNGRTIGSLGTARDRNGLA 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I RIDK AI KG + V V + P W
Sbjct: 238 IVRIDKAGEAIAKGDTILAGDVPVSLTLPAW 268
>gi|239831501|ref|ZP_04679830.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301]
gi|239823768|gb|EEQ95336.1| folate-binding protein YgfZ [Ochrobactrum intermedium LMG 3301]
Length = 329
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 98/270 (36%), Positives = 145/270 (53%), Gaps = 5/270 (1%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+
Sbjct: 49 TVNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDDLKPGALLIPQGKILFDFLVSRIDG 108
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERF 120
++ S I ++ Y+LR+ I QP + V +SW + S I D RF
Sbjct: 109 -GLRFDLPASVAADFIKRITLYRLRAKAEITQQPESLVSVSWQGDSPPSQDDSIKRDSRF 167
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A++ + R +G + +D + +LR HGI + TDF + +FPHD D G+S
Sbjct: 168 P-AELNVRRIYGRADGT-TDQSAWTKLRAEHGIAEGETDFAYNDVFPHDVNFDQTGGVSF 225
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC+IGQEVVSR+QHR R+R ++ LPP G+PI D EIGT+G +A
Sbjct: 226 PKGCFIGQEVVSRMQHRGTARRRVLVARSEVPLPPMGTPITVDGREIGTMGSSADMVGIA 285
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ RID+V A+ G + V + P
Sbjct: 286 LVRIDRVKDAMDAGSTVLAGETPVTLTLPP 315
>gi|15964857|ref|NP_385210.1| hypothetical protein SMc02558 [Sinorhizobium meliloti 1021]
gi|15074036|emb|CAC45683.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021]
Length = 280
Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 107/268 (39%), Positives = 146/268 (54%), Gaps = 3/268 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L +++ I+V GK A LQ +IT D+ L R A+LTPQGKIL FLIS+ + +
Sbjct: 2 VCLDDRAIIRVSGKDAETLLQTLITTDIAALTADEVRPGALLTPQGKILFDFLISR-DGE 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
LE + ++L+ +L YKLRS V + + V + + ++ S+ D RF A
Sbjct: 61 ALRLETTEDQAEALVKRLTMYKLRSAVDLSLNSPAPVTVVFGEDA--PAESYRDHRFEKA 118
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
V + R + + I LRI GI D+ FPHD LMDL G+S KG
Sbjct: 119 GVSVFRLYRDVPAAEAGIADLDRLRIAAGIAVAGRDYDLQDAFPHDVLMDLNGGLSFRKG 178
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
CY+GQEVVSR+QHR R+R +I+ G LPPSG+ I D IG+LG V+ + LAI R
Sbjct: 179 CYVGQEVVSRMQHRGTARRRLVIVAGAATLPPSGTNISVDGRPIGSLGTVLDRDGLAIVR 238
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
IDK AI K A+ VR+ + P W
Sbjct: 239 IDKAGEAIAKSEAILAGDVRLTLTLPAW 266
>gi|299134703|ref|ZP_07027895.1| folate-binding protein YgfZ [Afipia sp. 1NLS2]
gi|298590513|gb|EFI50716.1| folate-binding protein YgfZ [Afipia sp. 1NLS2]
Length = 291
Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats.
Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 13/282 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M S +L+++ +KV G+ A FL ++T ++ + + R A+LTPQGKI+ FL+++I
Sbjct: 1 MKSAFLTDRGVVKVGGEDARHFLNGLVTTNIDLVRPGLGRFGALLTPQGKIIADFLVTEI 60
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-SNSSF 115
F+L+ +S L +L YKLR+ V IE + GV+ W E + +F
Sbjct: 61 PAGHGGGFLLDCPKSLAQPLAARLSIYKLRAKVAIENLSDAFGVLALWGGEPQMTPDLAF 120
Query: 116 IDERFSIAD--VLLHRTWGHNEKIA-----SDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D R VLL + + A D Y RI G DF + FPH
Sbjct: 121 ADPRDESLGWRVLLPQEFAGKATTAIGAQMVDETEYEAHRIACGAPRGGIDFAYNDAFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
DA MD L+G+ KGCYIGQEVVSR+QHR R R + + G D +G+P+ + +G
Sbjct: 181 DANMDRLHGVDFDKGCYIGQEVVSRMQHRGTARTRIVRV-GLGDAIAAGTPVTAGEKTLG 239
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
T G G + LA+ RID+V A++ G + G + P
Sbjct: 240 TFGSSAGDRGLALLRIDRVADAVEAGTPVLADGHPLSFIAPQ 281
>gi|153009949|ref|YP_001371164.1| glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC
49188]
gi|151561837|gb|ABS15335.1| Glycine cleavage T-protein barrel [Ochrobactrum anthropi ATCC
49188]
Length = 287
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 142/269 (52%), Gaps = 5/269 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LSN++ + + G+ A FLQA+IT D+ L + A+L PQGKIL FL+S+I+
Sbjct: 8 VNLSNRALVHITGEEAEKFLQAVITTDLDKLGPDNLKPGALLAPQGKILFDFLVSRIDG- 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERFS 121
++ S I ++ Y+LR+ I P + V +SW E S + I D RF
Sbjct: 67 GLRFDLPASIAADFIKRITLYRLRAKAEITQLPESLVSVSWQTESHPSQNDSIKRDSRFP 126
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
++ +HR +G + +D + +LR +GI + TDF + +FPHD D G+S
Sbjct: 127 -TELNVHRIYGPADGT-TDESAWTKLRAEYGIAEGETDFAYNDVFPHDVNFDQTGGVSFP 184
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
KGC+IGQEVVSR+QHR R+R ++ +LPP G+ I D EIGT G +A+
Sbjct: 185 KGCFIGQEVVSRMQHRGTARRRVLVAHSDGNLPPMGTSITVDGREIGTTGSSADTIGIAL 244
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPH 270
RID+ AI G + + + P
Sbjct: 245 VRIDRAKDAIDAGSPILAGETPITLTLPP 273
>gi|307941575|ref|ZP_07656930.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4]
gi|307775183|gb|EFO34389.1| folate-binding protein YgfZ [Roseibium sp. TrichSKD4]
Length = 298
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ +L+ +S ++V G+ FLQ +ITAD+ + + A+LTPQGKIL FLI +
Sbjct: 5 TFAHLTERSVVRVSGEDVHHFLQNLITADMDKIDAAGSGFGALLTPQGKILFDFLIF-AQ 63
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF--SNSSFIDE 118
T++L+ I +L FY+LR+ V IE I + V W + + ++D
Sbjct: 64 NGTYLLDTPSQTGADFIKRLTFYRLRAKVAIEDISETHSVFAVWGEAKIDCEPAACWLDP 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPH 168
R ++ L R +G + I + ++ Y RI+ G+ + TDF S+IFPH
Sbjct: 124 RVAV---LGQRLYGKADDIKASLESAGATEAGHTAYAAHRISLGVPESLTDFDYSSIFPH 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
DA MD LNG+S +KGCY+GQEVVSR+ HR RKR + +T + LP +G+ I++ DI +G
Sbjct: 181 DADMDALNGVSFSKGCYVGQEVVSRVHHRGTARKRFIQVTSDNALPDAGTDIVSGDISVG 240
Query: 229 TLGVVVG-----KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
L K +A+ R+DKV + GV V + P W
Sbjct: 241 QLTSSTQLEDGTSKGIALTRLDKVVANRSDETPFSCGGVAVDLAIPDW 288
>gi|114707124|ref|ZP_01440022.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506]
gi|114537320|gb|EAU40446.1| hypothetical protein FP2506_04436 [Fulvimarina pelagi HTCC2506]
Length = 284
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 102/273 (37%), Positives = 158/273 (57%), Gaps = 8/273 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ +++ G A FLQ ++TA+ TLP +AR SA+LTPQGKIL FL+SK
Sbjct: 1 MPYAQLEDRAVLRLSGSDAGTFLQNLVTAETATLPKGVARPSALLTPQGKILFDFLVSKT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
ED + +E + RD+L +L YKLR+ V++E P + V + + + + DERF
Sbjct: 61 -EDGYRIECAAAIRDALAKRLTLYKLRAKVLVE--PADEPVFALWEAGETPSGAVRDERF 117
Query: 121 SIADVLLHRTWGHNEKI--ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
++R +G A+D T+ LR+ G+ + TDF + +FPHD L+D G+
Sbjct: 118 --GGGPVYRLYGEPTDAGEAADAATFRTLRLRSGVAEAETDFPQADMFPHDVLLDQNGGV 175
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+QHR R+R M+ +G L G+ + + + +IGTL +
Sbjct: 176 SFKKGCYVGQEVVSRMQHRGTARRRLMLASGERHLTE-GANVTSGEAKIGTLLAASERFG 234
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+A+ R DK+ +K G AL + GV ++ + P W
Sbjct: 235 IAVVRTDKLASILKSGAALAIDGVPIELTIPSW 267
>gi|254563637|ref|YP_003070732.1| glycine cleavage T protein [Methylobacterium extorquens DM4]
gi|254270915|emb|CAX26920.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylobacterium extorquens DM4]
Length = 284
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A+PFLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRTVVAVSGPDALPFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSR- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-FIDER 119
+D F L++ + L+ +L Y+LR+ V + P GV +W+ T + + D R
Sbjct: 60 SDDGFRLDVAAERVADLVKRLGLYRLRAKVTVAADPTLGVAAAWDAAETAAETVRVRDGR 119
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 LPALGERLYFAEGAFSADATE-DAYHAHRIGLGVPEGGRDFAFGDAFPHEALMDQLGGVD 178
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQEVVSR+QHR R R + + P G+ ++ +G G G +
Sbjct: 179 FKKGCYVGQEVVSRMQHRGTARTRILPIVYRDGPAPEPGTEVIAGARSLGFTGSAAGDRG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA R+D++ A+ G + G + P
Sbjct: 239 LATIRLDRLGDALAIGEPVRAGGTIAAVAKPD 270
>gi|323135653|ref|ZP_08070736.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242]
gi|322398744|gb|EFY01263.1| folate-binding protein YgfZ [Methylocystis sp. ATCC 49242]
Length = 273
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 2/266 (0%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L+++ I+V G A FL ++T D+ +L AR +A+LTPQGKIL FL+
Sbjct: 3 TAILLADRGVIEVAGADAGKFLHNLVTNDIASLERGEARFAALLTPQGKILFDFLVFATG 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
E ++L+ S L +L YKLRS + +E + ++ +
Sbjct: 63 EGRYLLDCPLSLAADLEKRLNMYKLRSKLTVENRSAELEAGAFPDATEAPKVEALALASD 122
Query: 122 IADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L R KI + + Y RI G+ DF + FPH+A MDLL G+
Sbjct: 123 PRAALGWRAIAEKGKIVALGERGEYDARRIRAGVPLGGVDFTYNDAFPHEADMDLLAGLD 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEVVSR++HR ++RKR D P G I +IEIG G G + L
Sbjct: 183 FKKGCYVGQEVVSRMKHRGLVRKRVTPYRAKGDAPAPGETIRAGEIEIGVTGSRAGDEGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVK 265
A+ R+D++ A +KG A GV ++
Sbjct: 243 ALIRLDRLADAKEKGDAPMAGGVALE 268
>gi|319898698|ref|YP_004158791.1| aminomethyltransferase [Bartonella clarridgeiae 73]
gi|319402662|emb|CBI76208.1| aminomethyltransferase [Bartonella clarridgeiae 73]
Length = 288
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQAIIT DV + + A+L+PQGK++ FLISKI+
Sbjct: 6 NAINLKNRKIIKVTGEEATHFLQAIITTDVKKINSRELFPGALLSPQGKVIADFLISKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
++ ++++I S D+ +L+ YKLR V I + + W E N SSF D+R
Sbjct: 66 QN-YMIDIAASLADAFHKRLILYKLRKKVEITKPSQEIINVFWQNESDNLNFDSSFTDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G + + + +RI++GI + + D+ +FPHD D ++G+
Sbjct: 125 FPKKEKVV-RIYGKIPFLTPECNAHWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCYIGQEV+SR+ HR IR+R +++ L SGS + + LG V +A
Sbjct: 184 FFNKGCYIGQEVISRMHHRRTIRRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCVKNEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V A+ K TV V V +
Sbjct: 243 LALMRIDHVKEAMDKNFQFTVDNVPVTINIAE 274
>gi|304392057|ref|ZP_07373999.1| glycine cleavage T protein [Ahrensia sp. R2A130]
gi|303296286|gb|EFL90644.1| glycine cleavage T protein [Ahrensia sp. R2A130]
Length = 283
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 95/274 (34%), Positives = 145/274 (52%), Gaps = 13/274 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + +N++ G+ A FL+ ++T L A+LTPQGKIL F I+ I
Sbjct: 13 MSQILHTNRATFSCTGEDATHFLENLVTC----LISGKPAFGALLTPQGKILFDFFITPI 68
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + + +RD LI +L FYKLR+ V ++ P+ V++ + T + +F D R
Sbjct: 69 DG-GYRFDCAAEQRDELIKRLGFYKLRAKV--DLAPLEEAVVTSWGDATRPDDAFDDPRL 125
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN---G 177
S L R + + +D + RI G+ + D P ++FPHD MD + G
Sbjct: 126 S---ALGWRAYRMQAEAKADDDAWLAHRIALGVPELGVDAEPGSVFPHDMSMDQFSKGSG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
++ KGCY+GQEVVSR+QHR R R + + +DLP SG+ ++ D IGTLG V G+
Sbjct: 183 VAFDKGCYVGQEVVSRMQHRGTARSRFVNVAAVNDLPESGAELMVGDRTIGTLGSVSGQH 242
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LA+ R+D+ AI +G +T G V + P W
Sbjct: 243 GLALVRLDRAAKAITEGAPITADGTEVMLTLPDW 276
>gi|144898986|emb|CAM75850.1| Glycine cleavage T protein (aminomethyl transferase)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 274
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 8/273 (2%)
Query: 1 MSSVYLSN--QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
M + + ++ + V G FLQ +I+ DV + A +A LTPQGK L ++
Sbjct: 1 MPAYQFTRLPRTVLNVAGDDRKTFLQGLISNDVAKIAPGQALWAAFLTPQGKFLWDLFLT 60
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ + DT ++++D + ++ KL YKLRS V I + V + + D
Sbjct: 61 E-QGDTVLIDVDAATAEAFRKKLSLYKLRSKVTITTTDL-AVFAVFGGDGALPEGVAADT 118
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R L+ + + + + R G+ D D + + D L+G+
Sbjct: 119 RLPAMGGRLYASQPPADMAEVPLAAWDAWRFAQGVPDGARDLIVDKSLLLENGFDELSGV 178
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQE+ +R ++R ++RKR + ++ P G+P+L ++E G +
Sbjct: 179 DFNKGCYMGQELTARTKYRGLVRKRLLPVSFDGAAPEVGTPVLVGEVEAGKMRSGGDGAG 238
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
LA+ R++ ++ G LT G + + P W
Sbjct: 239 LAMIRLEH----LRAGTPLTCGGKALAVTVPAW 267
>gi|49474072|ref|YP_032114.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse]
gi|49239576|emb|CAF25933.1| hypothetical protein BQ04340 [Bartonella quintana str. Toulouse]
Length = 288
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 102/272 (37%), Positives = 149/272 (54%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ + IKV G+ A FLQ++IT DV + + A+L+PQGK+L FLI K +
Sbjct: 6 NAICFKKRKVIKVTGEEATDFLQSLITTDVTKIAPQEIFPGALLSPQGKVLADFLIGKRD 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
+D ++++I S D+L +LLFYKLR V I V +SWN E N SSFID+R
Sbjct: 66 DD-YLIDIVSSLADTLYKRLLFYKLRKKVEISQPFQELVTISWNNESNNFNFDSSFIDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ RT+G A D ++ LRI + I + D+ IFPHD D ++G+
Sbjct: 125 FPQKEKIV-RTYGEIPFSAPDYNKNWNRLRIRYAIAESGQDYEIGKIFPHDINYDQISGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCYIGQE+VSR+ HR+ R+R +I+ +L S S + +G LG +A
Sbjct: 184 SFNKGCYIGQEIVSRMHHRHTARRRVLIVKSQHEL-TSESTVEAGTKVLGHLGTCAANEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V A+ + TV V S
Sbjct: 243 LALMRIDHVKDAMNNNITFTVENTPVTISIAE 274
>gi|296446345|ref|ZP_06888290.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b]
gi|296256118|gb|EFH03200.1| folate-binding protein YgfZ [Methylosinus trichosporium OB3b]
Length = 280
Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KI 60
S+ LS++ ++V G A FL I+T DV +L AR +A+LTPQGKI+ F+I K
Sbjct: 3 SATLLSDRGVVEVAGPDAAKFLHGILTNDVNSLAAGEARFAALLTPQGKIITDFMIFAKA 62
Query: 61 EEDT--FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SS 114
ED F+L+ + +++L+D+L FYKLR+ V + + +++ + +
Sbjct: 63 AEDGLVFLLDCPAALKETLLDRLKFYKLRAAVTLTDRSGEFASVAFPEAAEKPEIDAIAL 122
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
D R +A+ + Y RI D DF FPH+A MD
Sbjct: 123 AADPRAPTLGWRGLVAKALAVTVATAPRALYDAKRIAAAAPDGGIDFDYGDAFPHEANMD 182
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L G+ KGC++GQEVVSR++HR +RKR P G+P+ ++EIG G
Sbjct: 183 RLAGVDFKKGCFLGQEVVSRMKHRGPVRKRVTTFHAQGPAPAPGTPVKAGEVEIGVTGSA 242
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
VG + LA+ R+D++ A G G+ + S P
Sbjct: 243 VGGEGLALIRLDRLADAKSGGAVPLAGGIALDFSVPE 279
>gi|298293892|ref|YP_003695831.1| folate-binding protein YgfZ [Starkeya novella DSM 506]
gi|296930403|gb|ADH91212.1| folate-binding protein YgfZ [Starkeya novella DSM 506]
Length = 282
Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 128/273 (46%), Gaps = 5/273 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++ ++ G A FL ++TA T AR SA+LTPQGKI+ ++
Sbjct: 1 MPIAILKERAVARIAGADAAHFLDNLLTA--RTPEPGEARYSALLTPQGKIVADMIVVAT 58
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDER 119
E F L++ R L+ +L Y+LR+ V I + V ++W ++ ++ D R
Sbjct: 59 EG-GFRLDVPRLAVPDLVKRLQLYRLRAKVEIGVLDDLVVAVAWGGSSPLVDAFAYDDPR 117
Query: 120 FSIADVLLHRTWGHNEKIA-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
G +IA +H RI G+ + DFL FPH+A MD L GI
Sbjct: 118 LPELGRRFLLPAGEASQIAMVPEAQWHAHRIALGVPEGGMDFLYGDAFPHEADMDQLGGI 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY+GQE+VSR+QHR R R + P G+PIL IG LG V +A
Sbjct: 178 DFDKGCYVGQEIVSRMQHRGTARTRIIPFALCGPSPAEGTPILAGGKSIGRLGSGVEGRA 237
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
L + R+D+++ A + G + P W
Sbjct: 238 LGLVRLDRLEEARAARHVIEADGAALVPERPDW 270
>gi|306845268|ref|ZP_07477844.1| folate-binding protein YgfZ [Brucella sp. BO1]
gi|306274427|gb|EFM56234.1| folate-binding protein YgfZ [Brucella sp. BO1]
Length = 329
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 48 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 107
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 108 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQSDSPASDNDSIKRDSR 166
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 167 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 224
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G L
Sbjct: 225 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDAPLPPMGTPITVDGREIGAMGSSANHIGL 284
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 285 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 315
>gi|256113206|ref|ZP_05454074.1| aminomethyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265994614|ref|ZP_06107171.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether]
gi|262765727|gb|EEZ11516.1| glycine cleavage T-protein [Brucella melitensis bv. 3 str. Ether]
Length = 287
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/271 (33%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
TKGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FTKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|329888212|ref|ZP_08266810.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
gi|328846768|gb|EGF96330.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
Length = 262
Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 13/271 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS L +++ I+V G A PFL ++T DV TL R A+L+P G++L I
Sbjct: 1 MSIARLDSRALIRVSGPDARPFLHNLLTQDVETLQPGELRFGALLSPPGRLLFDLFIW-G 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
EED +L++ +RD+L+ +L YKLR+ V + P + V ++W + D R
Sbjct: 60 EEDGVVLDVAAERRDALVQRLSLYKLRAQVEVMPIP-DAVFVAWGVD--VPEGFVADPRL 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R WG + + + R+ G+ DP D L +P +A DLLNGI
Sbjct: 117 P---GLGGRRWGDQSETDAVEADWQAHRLTLGVPDPTQDALMDKTYPIEADFDLLNGIDF 173
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC+IGQE SR++ R I+ R M IT P G +L ++ G + +A+A
Sbjct: 174 HKGCFIGQETTSRMKRRGTIKNRMMAITFEGPAPERGVEVLKGELRAGEVMTGAEGRAIA 233
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ R+D++D LTV G V+ P W
Sbjct: 234 LMRLDRMDGD------LTVEGRPVRVEKPDW 258
>gi|225627165|ref|ZP_03785203.1| folate-binding protein YgfZ [Brucella ceti str. Cudo]
gi|261315117|ref|ZP_05954314.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
gi|225618000|gb|EEH15044.1| folate-binding protein YgfZ [Brucella ceti str. Cudo]
gi|261304143|gb|EEY07640.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
Length = 316
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 35 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 94
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 95 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 153
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 154 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 211
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 212 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 271
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 272 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 302
>gi|306842068|ref|ZP_07474740.1| folate-binding protein YgfZ [Brucella sp. BO2]
gi|306287818|gb|EFM59241.1| folate-binding protein YgfZ [Brucella sp. BO2]
Length = 287
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGDEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI D EIG +G + L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVDGREIGAMGSSANQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|254718807|ref|ZP_05180618.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
gi|265983789|ref|ZP_06096524.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
gi|264662381|gb|EEZ32642.1| glycine cleavage T-protein barrel [Brucella sp. 83/13]
Length = 287
Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADAAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|17987565|ref|NP_540199.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|256044363|ref|ZP_05447267.1| aminomethyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|260563715|ref|ZP_05834201.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|265990778|ref|ZP_06103335.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str.
Rev.1]
gi|17983269|gb|AAL52463.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260153731|gb|EEW88823.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|263001562|gb|EEZ14137.1| glycine cleavage T-protein barrel [Brucella melitensis bv. 1 str.
Rev.1]
Length = 287
Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|306837527|ref|ZP_07470402.1| folate-binding protein YgfZ [Brucella sp. NF 2653]
gi|306407419|gb|EFM63623.1| folate-binding protein YgfZ [Brucella sp. NF 2653]
Length = 286
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 5 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 65 G-GLRFDLPADAAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 123
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 124 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 181
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G L
Sbjct: 182 FPKGCFIGQEVVSRMQHRGTARRRVLIAKSDAPLPPMGTPITVEGREIGAMGSSANHIGL 241
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 242 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 272
>gi|197104040|ref|YP_002129417.1| aminomethyltransferase [Phenylobacterium zucineum HLK1]
gi|196477460|gb|ACG76988.1| aminomethyltransferase [Phenylobacterium zucineum HLK1]
Length = 268
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 13/273 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ V L++++ I V G FLQ ++T DV TL AR A+LTPQG++L
Sbjct: 1 MTIVQLTSRAVIAVGGPEWRSFLQGLLTQDVETLQPGQARFGALLTPQGRLLYDLFAV-G 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
ED +L+++ + RD+L+ +L Y+LR+ V + P V ++ D R
Sbjct: 60 AEDGCLLDVEAAHRDALLQRLTMYRLRAKVELS-APDTAVFAAFPDA--PGPGWIRDPRR 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R +G E+ SD Y R+ G+ D+ + +P +A DLL GI
Sbjct: 117 PE---LGWRGYGLAERATSDEAAYDAHRLRLGVP-GPADWGTDSTYPIEADFDLLAGIDF 172
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQE SR++ R I+ R + I P SG+ IL D+ G + +A+A
Sbjct: 173 KKGCFVGQETTSRMKRRGQIKSRMLPIVFEGPPPASGTEILAGDLRAGEVLSGTEGRAMA 232
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ R+D+ G LT G V+ P W++
Sbjct: 233 LVRLDRAL-----GADLTADGRPVRVEPPAWFE 260
>gi|225852188|ref|YP_002732421.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457]
gi|256264302|ref|ZP_05466834.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|225640553|gb|ACO00467.1| folate-binding protein YgfZ [Brucella melitensis ATCC 23457]
gi|263094575|gb|EEZ18373.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|326408688|gb|ADZ65753.1| folate-binding protein YgfZ [Brucella melitensis M28]
gi|326538413|gb|ADZ86628.1| folate-binding protein YgfZ [Brucella melitensis M5-90]
Length = 287
Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 8/275 (2%)
Query: 1 MSS---VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
M++ V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+
Sbjct: 2 MTASKMVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLV 61
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI- 116
S+IE ++ + ++ Y+LR+ I P + V + W + S++ I
Sbjct: 62 SRIEG-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIK 120
Query: 117 -DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D RF +L H + + + +LR +GI + DF +FPHD D
Sbjct: 121 RDSRFPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQT 178
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
G+S KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G
Sbjct: 179 GGVSFPKGCFIGQEVVSRMQHRGTTRRRVLIARSDVPLPPMGTPITVEGREIGAMGSSAS 238
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ LA+ RID+V A+ G ++ + S P
Sbjct: 239 QIGLALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|90420870|ref|ZP_01228775.1| putative aminomethyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334845|gb|EAS48617.1| putative aminomethyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 288
Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 3/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +S + V G++A FLQ ++TAD+ +L R A+LTPQG+IL FLI K
Sbjct: 1 MPYARLPERSLLAVTGEAAHHFLQNLVTADLDSLADGEMRPCALLTPQGRILFEFLIGK- 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++ S L +L Y+LR+ + IE + V+ W + + + D RF
Sbjct: 60 QADGLRIDVAASAAADLKKRLTLYRLRTKIGIESSDLP-VLAVWEEPDLTAAELYADRRF 118
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ E I + Y RI GI + TD+ S +FPHD L D G+S
Sbjct: 119 PEGEMARLYGAPPAELIEASPDDYRLRRIRGGIAEAETDYPGSDVFPHDVLFDQNGGVSF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGC++GQEVVSR+QHR R+R M++ G L P GS I IGT+ G +
Sbjct: 179 RKGCFVGQEVVSRMQHRGTARRRLMLLAGERHLTP-GSNIEAGGKTIGTVLSADGTEGFG 237
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
RID++ A+ +G L+ GV V A+ P W
Sbjct: 238 FLRIDRLAGALSRGEELSADGVPVTATIPPW 268
>gi|23501554|ref|NP_697681.1| aminomethyltransferase [Brucella suis 1330]
gi|62289627|ref|YP_221420.1| aminomethyltransferase [Brucella abortus bv. 1 str. 9-941]
gi|82699555|ref|YP_414129.1| glycine cleavage T protein (aminomethyl transferase) [Brucella
melitensis biovar Abortus 2308]
gi|148560194|ref|YP_001258651.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840]
gi|161618637|ref|YP_001592524.1| glycine cleavage T-protein barrel [Brucella canis ATCC 23365]
gi|254688942|ref|ZP_05152196.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|254693424|ref|ZP_05155252.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|254697077|ref|ZP_05158905.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|254701454|ref|ZP_05163282.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|254704000|ref|ZP_05165828.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|254707626|ref|ZP_05169454.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M163/99/10]
gi|254709792|ref|ZP_05171603.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|254713794|ref|ZP_05175605.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|254717149|ref|ZP_05178960.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|254729973|ref|ZP_05188551.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|256031282|ref|ZP_05444896.1| glycine cleavage T-protein barrel [Brucella pinnipedialis
M292/94/1]
gi|256060794|ref|ZP_05450956.1| glycine cleavage T-protein barrel [Brucella neotomae 5K33]
gi|256257190|ref|ZP_05462726.1| glycine cleavage T-protein barrel [Brucella abortus bv. 9 str. C68]
gi|256369104|ref|YP_003106612.1| aminomethyltransferase, putative [Brucella microti CCM 4915]
gi|260168420|ref|ZP_05755231.1| aminomethyltransferase, putative [Brucella sp. F5/99]
gi|260545618|ref|ZP_05821359.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260566753|ref|ZP_05837223.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260754429|ref|ZP_05866777.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|260757648|ref|ZP_05869996.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|260761475|ref|ZP_05873818.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|260883457|ref|ZP_05895071.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68]
gi|261213675|ref|ZP_05927956.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|261218964|ref|ZP_05933245.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|261317327|ref|ZP_05956524.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|261321537|ref|ZP_05960734.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|261324785|ref|ZP_05963982.1| glycine cleavage T-protein [Brucella neotomae 5K33]
gi|261751994|ref|ZP_05995703.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|261754653|ref|ZP_05998362.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|261757881|ref|ZP_06001590.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|265988365|ref|ZP_06100922.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1]
gi|294852030|ref|ZP_06792703.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026]
gi|297248038|ref|ZP_06931756.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str.
B3196]
gi|23347465|gb|AAN29596.1| aminomethyltransferase, putative [Brucella suis 1330]
gi|62195759|gb|AAX74059.1| aminomethyltransferase, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615656|emb|CAJ10643.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
melitensis biovar Abortus 2308]
gi|148371451|gb|ABQ61430.1| folate-binding protein YgfZ [Brucella ovis ATCC 25840]
gi|161335448|gb|ABX61753.1| Glycine cleavage T-protein barrel [Brucella canis ATCC 23365]
gi|255999264|gb|ACU47663.1| aminomethyltransferase, putative [Brucella microti CCM 4915]
gi|260097025|gb|EEW80900.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260156271|gb|EEW91351.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260667966|gb|EEX54906.1| glycine cleavage T-protein barrel [Brucella abortus bv. 4 str. 292]
gi|260671907|gb|EEX58728.1| glycine cleavage T-protein barrel [Brucella abortus bv. 2 str.
86/8/59]
gi|260674537|gb|EEX61358.1| glycine cleavage T-protein barrel [Brucella abortus bv. 6 str. 870]
gi|260872985|gb|EEX80054.1| glycine cleavage T-protein [Brucella abortus bv. 9 str. C68]
gi|260915282|gb|EEX82143.1| glycine cleavage T-protein barrel [Brucella abortus bv. 3 str.
Tulya]
gi|260924053|gb|EEX90621.1| glycine cleavage T-protein barrel [Brucella ceti M13/05/1]
gi|261294227|gb|EEX97723.1| glycine cleavage T-protein barrel [Brucella ceti M644/93/1]
gi|261296550|gb|EEY00047.1| glycine cleavage T-protein barrel [Brucella pinnipedialis B2/94]
gi|261300765|gb|EEY04262.1| glycine cleavage T-protein [Brucella neotomae 5K33]
gi|261737865|gb|EEY25861.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|261741747|gb|EEY29673.1| glycine cleavage T-protein barrel [Brucella suis bv. 5 str. 513]
gi|261744406|gb|EEY32332.1| glycine cleavage T-protein barrel [Brucella suis bv. 3 str. 686]
gi|264660562|gb|EEZ30823.1| glycine cleavage T-protein [Brucella pinnipedialis M292/94/1]
gi|294820619|gb|EFG37618.1| glycine cleavage T-protein barrel [Brucella sp. NVSL 07-0026]
gi|297175207|gb|EFH34554.1| glycine cleavage T-protein barrel [Brucella abortus bv. 5 str.
B3196]
Length = 287
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|189023880|ref|YP_001934648.1| glycine cleavage T protein (aminomethyl transferase) [Brucella
abortus S19]
gi|189019452|gb|ACD72174.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
abortus S19]
Length = 286
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 5 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 65 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 123
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 124 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 181
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 182 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 241
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 242 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 272
>gi|114328650|ref|YP_745807.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316824|gb|ABI62884.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
Length = 278
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S L +++ + V G+ + FLQ +++ DV A +A+LTPQGK + F I +
Sbjct: 8 SALLPHRAVLAVTGEDRVTFLQGLVSNDVTLTAPGQAIWAAMLTPQGKWIADFFIF-SDG 66
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L+++ ++ LI KL ++LR+ V I + V W + S + +
Sbjct: 67 QRLLLDVEATQAAMLIQKLSRFRLRARVAISAESDLHVHAGWGSAPIPAGSVCVAPDPRL 126
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ G D Y R++ G+ D + D +A D LNGIS TK
Sbjct: 127 PEAGWRALTGAGILPEGDAAAYDTHRLSLGLPDGSADLEAEKTVLLEAGFDELNGISWTK 186
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQE+ +R ++R ++++R + +TG LPP +P++ D E+GT+ GK LAI
Sbjct: 187 GCYMGQELTARTRYRGLLKRRLVPVTGHAPLPPRETPLMQDGKEVGTMRSSRGKTGLAIL 246
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
R++ + ++ G + + W +
Sbjct: 247 RLEALHAPVQAG------DQSLTPAPAPWMR 271
>gi|319405464|emb|CBI79083.1| Aminomethyltransferase [Bartonella sp. AR 15-3]
Length = 288
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 8/273 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATHFLQALITTDVTKINSQELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNS--SFIDE 118
++ ++++I S D+ +L+ YKL + I QP+ ++ + W E N SFID+
Sbjct: 66 QN-YMIDITASLADAFHKRLILYKLHKKIEI-TQPLQEIINVFWQNELDSLNFNLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ RT+G + + + +RI++GI + + D+ +FPHD D ++G
Sbjct: 124 RFPEKEKVV-RTYGKTPFLIPEYNIYWDRMRIHYGIAESDQDYEIGKVFPHDINYDQIHG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCYIGQEV+SRI HR R+R +++ L SGS + + LG +
Sbjct: 183 LFFNKGCYIGQEVISRIHHRRTARRRFLVVKSQYPL-TSGSTVKAGTKILSQLGTCAKNE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
ALA+ RID V A++K + TV + V S
Sbjct: 242 ALALMRIDHVKEAMEKNLQFTVDDIPVTISIAE 274
>gi|121602749|ref|YP_988794.1| aminomethyltransferase [Bartonella bacilliformis KC583]
gi|120614926|gb|ABM45527.1| aminomethyltransferase [Bartonella bacilliformis KC583]
Length = 286
Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 151/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ I V G+ A FLQ +IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAISLKNRKIINVIGEEATHFLQMLITTDVTKIGPQELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119
+ ++++I S D+ +LL YKL + + +Q I + L + SFID+R
Sbjct: 66 Q-GYMIDIAESLADTFQKRLLLYKLHKKIEVTQPLQTITTIFLENEINTSKFTLSFIDKR 124
Query: 120 FSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ RT+G +A D +H +RI + I + D+ T+FPHD D + G+
Sbjct: 125 FPENEKII-RTYGETPFLAPKDNDNWHRMRIRYAITESGQDYEIGTVFPHDINYDQIGGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEVVSR+ HR I R+R +I+TG L P GS I + +G LG + +A
Sbjct: 184 SFNKGCYVGQEVVSRMHHRKIARRRFLIVTGQHYLTP-GSTIEASNKTLGKLGTCIANEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V A+ K TV+ + V S
Sbjct: 243 LALMRIDHVKDAMDKDSQFTVNNLPVTISIAE 274
>gi|163842938|ref|YP_001627342.1| glycine cleavage T-protein barrel [Brucella suis ATCC 23445]
gi|163673661|gb|ABY37772.1| Glycine cleavage T-protein barrel [Brucella suis ATCC 23445]
Length = 287
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEVDFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IGQEVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FPKGCFIGQEVVSRMQHRGTARRRVLIARSDVTLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|182677705|ref|YP_001831851.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633588|gb|ACB94362.1| folate-binding protein YgfZ [Beijerinckia indica subsp. indica ATCC
9039]
Length = 291
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +L+++ +K+ G A L +IT +L AR SA+LTPQGK+L F I + E
Sbjct: 5 TCFLADRGVLKIVG-DATALLHKVITNTMLNFVPGEARYSALLTPQGKLLFDFFILPLPE 63
Query: 63 D---TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI-- 116
++++ + + L+ ++ F+K+R+ +E + GV W + + +
Sbjct: 64 GPEAGYLIDCAKEQSADLLKRINFHKMRAKFTVEDVSEQFGVAAFWGSDPAPAIEGAVIY 123
Query: 117 -DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R L + + +D Y R++ G+ DF F HDA +D
Sbjct: 124 LDPRAPEMGKRLIASRAALAALPADTTAYEAHRVSLGVPKGGVDFPYGDTFLHDANIDRC 183
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NG+ KGCY+GQEVV+R+ R RKR + + P G+ I + IG + G
Sbjct: 184 NGVDFKKGCYVGQEVVARVHFRRSARKRIIPLHFEGPTPALGTEIKAGETSIGQVSSTAG 243
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ R+D+++ A G + V+A P
Sbjct: 244 AAGLAMLRLDRLEDARTAGTPVKAGEAVVEAFVPA 278
>gi|170750384|ref|YP_001756644.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM
2831]
gi|170656906|gb|ACB25961.1| folate-binding protein YgfZ [Methylobacterium radiotolerans JCM
2831]
Length = 283
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/270 (33%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A LQ ++T +V TL AR A+LTPQGKIL FLIS+I
Sbjct: 1 MPVALLPDRALVTVTGPDATTLLQGVLTCNVETLRPGEARLGALLTPQGKILFDFLISRI 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D F ++ + L +L Y+LR+ I P V +W + + D R
Sbjct: 61 P-DGFRFDVLADRAADLAKRLTLYRLRAQATIAADPTVAVAAAWAGATPPAAEAVADTRA 119
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L+ G A++ YH RI G+ + DF FPH+ALMD L G+
Sbjct: 120 VDLGARLYAAAGAFSADAAE-ADYHAHRIALGVPEGGRDFAFGDAFPHEALMDQLGGVDF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R R + D P G+ I +GT G G + LA
Sbjct: 179 RKGCYVGQEVVSRMQHRGTARTRILAAAYPDAAPAPGTEITAGGKVLGTAGSAAGNRGLA 238
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270
R+D++ A+ G V P
Sbjct: 239 TIRLDRLGDALAAGETPRAGDRPVTLERPA 268
>gi|23015098|ref|ZP_00054885.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 300
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 25/290 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V+L ++ ++V G+ FLQ +++ D+ + A + +LTPQGK L + ++ D
Sbjct: 7 VHLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVFTGLLTPQGKFLYDLFVVELG-D 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQE-------H 108
F++E + ++ + L KL YKLRS V I + GV +++ E
Sbjct: 66 VFLIEAEAARLEDLRKKLSMYKLRSKVTIAVASNMAVFGLMGEGVAAAFDLEPQAGAATE 125
Query: 109 TFSNSSFIDERFSIADVL-------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
S F+D R + + R N+ + ++ E RI G+ D + D
Sbjct: 126 FAGGSVFVDPRLAEGGLRALLPVDGGPRVLEANDFKPAPFHSWDEARIRLGLPDGSRDLE 185
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ + LNG+ KGCY+GQE+ +R ++R +++KR M + +P G+ I
Sbjct: 186 VDKALLLENGFEELNGVDFNKGCYMGQELTARTKYRGLVKKRLMPVEVNGPMPAPGTVIH 245
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ E G + G LA+ R+D+ + GM TV R+ A+ P W
Sbjct: 246 LGEAEAGEMRSACGHAGLALIRLDQWRAS--GGMGFTVGTARLDAAKPKW 293
>gi|256159392|ref|ZP_05457174.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
gi|256254690|ref|ZP_05460226.1| glycine cleavage T-protein barrel [Brucella ceti B1/94]
gi|261221868|ref|ZP_05936149.1| glycine cleavage T-protein [Brucella ceti B1/94]
gi|265997832|ref|ZP_06110389.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
gi|260920452|gb|EEX87105.1| glycine cleavage T-protein [Brucella ceti B1/94]
gi|262552300|gb|EEZ08290.1| glycine cleavage T-protein barrel [Brucella ceti M490/95/1]
Length = 287
Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats.
Identities = 89/271 (32%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS ++ + + G+ A FLQA+IT ++ L + A+LTPQGKIL FL+S+IE
Sbjct: 6 KTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGKILFDFLVSRIE 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER 119
++ + ++ Y+LR+ I P + V + W + S++ I D R
Sbjct: 66 G-GLRFDLPADVAGDFVKRITLYRLRAKAEIVQVPESLVSVCWQGDSPASDNDSIKRDSR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
F +L H + + + +LR +GI + DF +FPHD D G+S
Sbjct: 125 FPAQLNVLR--LYHQASANAGLDAWVQLRAEYGIAEGEADFAYGDVFPHDVNFDQTGGVS 182
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGC+IG EVVSR+QHR R+R +I LPP G+PI + EIG +G + L
Sbjct: 183 FPKGCFIGHEVVSRMQHRGTARRRVLIARSDVPLPPMGTPITVEGREIGAMGSSASQIGL 242
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ RID+V A+ G ++ + S P
Sbjct: 243 ALVRIDRVKDAMDTGNSILAGDAAITLSLPP 273
>gi|319404024|emb|CBI77612.1| Aminomethyltransferase [Bartonella rochalimae ATCC BAA-1498]
Length = 288
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKINSRELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDER 119
++ ++++I S D +L YKL + I +Q + V + + ++ N SF+D+R
Sbjct: 66 QN-YMIDIVASLADVFHKRLTLYKLHKKIEITEPLQEVINVFWNNDLDNLNFNLSFVDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G+
Sbjct: 125 FPKKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCYIGQEV+SR+ HR R+R +++ L SGS I LG V +A
Sbjct: 184 FFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTIKAGTKIFSQLGTCVKNEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V AI K + TV + V + P
Sbjct: 243 LALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274
>gi|319407037|emb|CBI80674.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 288
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/273 (34%), Positives = 153/273 (56%), Gaps = 8/273 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NAINLKNRKIIKVIGEEATNFLQALITTDVTKIKSRELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQ--EHTFSNSSFIDE 118
++ ++++I S D +L Y+L + I I+P+ V+ + WN ++ N SFID+
Sbjct: 66 QN-YMIDIVASLADVFHKRLALYRLHKKIEI-IEPLQEVINVFWNNSLDNLNFNLSFIDK 123
Query: 119 RFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
RF + ++ RT+G + + T + ++RI++GI + D+ + P+D D ++G
Sbjct: 124 RFPEKEKVI-RTYGKIPFLIPEYNTCWDQMRIHYGIAESGQDYEIGKVLPYDINYDQIHG 182
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCYIGQEV+SR+ HR R+R +++ L SGS + LG V +
Sbjct: 183 LFFNKGCYIGQEVISRMYHRKTARRRFLVVKSQAPL-TSGSTVKAGTKIFSQLGTCVKNE 241
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
ALA+ RID V AI K + TV + V + P
Sbjct: 242 ALALMRIDHVKEAIDKNLQFTVDDIPVTINIPE 274
>gi|296116365|ref|ZP_06834980.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769]
gi|295977065|gb|EFG83828.1| folate-binding protein YgfZ [Gluconacetobacter hansenii ATCC 23769]
Length = 278
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 12/274 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEE 62
YL +++ + V GK + FLQ +++ D+ T+ A +A L+ QGK L F +
Sbjct: 5 AYLPDRAVLAVSGKDRVSFLQGLVSNDMTTVTPDRAAWTAFLSAQGKWLADFFVFADPHG 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDERF 120
+ +L+ D ++ +L +L Y+LR++V I V W+ D R
Sbjct: 65 ERLLLDCDATQAATLRTRLSRYRLRTDVDISETG-YAVHAQWDGTAPADERFPGSADPRL 123
Query: 121 SIADVLLHRTWGH-NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
D+ GH + +D Y R++ G+ D D +A D LNGIS
Sbjct: 124 P--DIGWRMLLGHVAPDVTADALDYDRHRLSLGLPDGVRDCESGKTLLLEANFDQLNGIS 181
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
TKGCY+GQE+ +R ++R ++R+ + + G DLP +PI+ D ++G + + +
Sbjct: 182 WTKGCYMGQELTARTRYRGLVRRHLLPVEGAHDLPEPATPIMHDGHKVGEIRSSRDQAGM 241
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
A+ R + LT G V P W++
Sbjct: 242 AMIRSSHIHTP-----GLTAAGHPVSIRVPPWFR 270
>gi|330994708|ref|ZP_08318631.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp.
SXCC-1]
gi|329758349|gb|EGG74870.1| Putative transferase C1orf69-like protein [Gluconacetobacter sp.
SXCC-1]
Length = 275
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L +++ + V G + FLQ +++ D+ T+ A +A L+ QGK L F + E
Sbjct: 5 AHLPDRAVLAVSGADRVSFLQGLVSNDMTTVAPGHAVWTAFLSAQGKWLADFFVLADPEG 64
Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERF 120
+++ DR++ D L +L Y+LR+ V I V +W T + D R
Sbjct: 65 VRLLVDCDRAQADMLRQRLSRYRLRAQVEIGETG-YAVHAAWGSGFTPPAGYPAAPDPRL 123
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
A + + A D+ Y R+ G+ D D +A D LNGIS
Sbjct: 124 PDAGWRVLLGHPAPDASADDV-DYDRHRLALGLPDGARDCESDRTLLLEANFDQLNGISW 182
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TKGCY+GQE+ +R ++R ++R+ + + +LP G+P+++ D +G + +A
Sbjct: 183 TKGCYMGQELTARTRYRGLVRRHLLPVMAGRELPTPGTPVMSGDTAVGEMRSSRDSAGMA 242
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ R + + L G + P W+
Sbjct: 243 MIRNEHIHD-----TDLVAGGHALHVRVPQWF 269
>gi|221233328|ref|YP_002515764.1| aminomethyltransferase family protein [Caulobacter crescentus
NA1000]
gi|220962500|gb|ACL93856.1| aminomethyltransferase family protein [Caulobacter crescentus
NA1000]
Length = 281
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 13/269 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L++++ I V G FLQ ++T DV TL R + +LTPQGK+L ++ E
Sbjct: 24 LARLASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGKLLYDLFVA-GAE 82
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D +L++ + RD+++ +L Y+LR+ V + + V+ + T + D R
Sbjct: 83 DGALLDVAAAHRDAILTRLSMYRLRAKVEL-VASDRPVIAVFGGA-TSGEGLYADPRLPA 140
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ + +D Y R+ G+ TD+ +P +A DLL GI K
Sbjct: 141 LGARAY----DDRATNADEDVYEAHRLALGVP-GPTDWGSEATYPIEANFDLLAGIDFKK 195
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GC++GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+
Sbjct: 196 GCFVGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALL 255
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271
R+D+++ G+ALTV G V+ P W
Sbjct: 256 RLDRIE-----GVALTVEGRPVRVERPDW 279
>gi|258542812|ref|YP_003188245.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01]
gi|256633890|dbj|BAH99865.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01]
gi|256636949|dbj|BAI02918.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-03]
gi|256640002|dbj|BAI05964.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-07]
gi|256643058|dbj|BAI09013.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-22]
gi|256646113|dbj|BAI12061.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-26]
gi|256649166|dbj|BAI15107.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-32]
gi|256652153|dbj|BAI18087.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655210|dbj|BAI21137.1| aminomethyltransferase [Acetobacter pasteurianus IFO 3283-12]
Length = 291
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L N++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ F + +D
Sbjct: 8 TRLKNRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDD 67
Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDE 118
T +L+ + ++L L ++LRS+V ++I + V ++W S SF D
Sbjct: 68 TCLLLDCATEQVENLKTTLQRFRLRSDVQLDITALP-VHVAWGNPPPDSVLENAISFRDP 126
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R A L + I + + Y+ R+ G+ D D +A +DLL G+
Sbjct: 127 RLEEAGWRLI-DAAPDTLITATEQGYNLHRLVLGLPDGVQDCEVGRTLAAEANLDLLGGV 185
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEV +R+ +R ++++R M + T LP G+P+L D +E+GTL
Sbjct: 186 SWKKGCYMGQEVTARMHYRTLVKRRLMPVAATSPLPAPGTPVLCDGVEVGTLRSSQDHVG 245
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA+ + D ++ LT + P W +
Sbjct: 246 LALLKTDAANN------QLTCAAHPLVVRLPAWQE 274
>gi|329114590|ref|ZP_08243349.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001]
gi|326696070|gb|EGE47752.1| Glycine Cleavage T Protein [Acetobacter pomorum DM001]
Length = 291
Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 13/275 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ +K+ G + FLQ ++TAD+ L A SA LTPQG+ F + +D
Sbjct: 8 TRLEKRTVLKLSGADRVRFLQGLVTADIAALEPGDATWSACLTPQGRWQADFFVVSDPDD 67
Query: 64 T-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDE 118
T +L+ + ++L L ++LRS+V +E+ + V ++W S SF D
Sbjct: 68 TCLLLDCATEQAENLKTTLRRFRLRSDVQLELTALP-VHVAWGNPPPDSVLENAISFRDP 126
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R A L I + + Y+ RI G+ D D +A +DLL G+
Sbjct: 127 RLEDAGWRLIDAAPDTP-ITATEQDYNLHRIILGLPDGVQDCEVGRTLAAEANLDLLGGV 185
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQEV +R+ +R ++++R M I T LP G+ +L + +E+GTL
Sbjct: 186 SWKKGCYMGQEVTARMHYRTLVKRRLMPIAATSPLPAPGTSVLCNGVEVGTLRSSQDHVG 245
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA+ + + ++ LT + P W +
Sbjct: 246 LALLKTEAANN------QLTCAEHPLVVRLPTWLE 274
>gi|16124640|ref|NP_419204.1| aminomethyltransferase [Caulobacter crescentus CB15]
gi|13421542|gb|AAK22372.1| aminomethyltransferase, putative [Caulobacter crescentus CB15]
Length = 263
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 13/269 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L++++ I V G FLQ ++T DV TL R + +LTPQGK+L ++ E
Sbjct: 6 LARLASRAVIAVSGPDWRSFLQGLLTQDVETLAVGELRFAGLLTPQGKLLYDLFVA-GAE 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D +L++ + RD+++ +L Y+LR+ V + + V+ + T + D R
Sbjct: 65 DGALLDVAAAHRDAILTRLSMYRLRAKVEL-VASDRPVIAVFGGA-TSGEGLYADPRLPA 122
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ + +D Y R+ G+ TD+ +P +A DLL GI K
Sbjct: 123 LGARAY----DDRATNADEDVYEAHRLALGVP-GPTDWGSEATYPIEANFDLLAGIDFKK 177
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GC++GQE SR++ R I+ R + IT PP G+ +L ++ G + +A+A+
Sbjct: 178 GCFVGQETTSRMKRRGTIKNRMLPITFDGPPPPFGAEVLAGELRAGEVLSGRDGQAMALL 237
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271
R+D+++ G+ALTV G V+ P W
Sbjct: 238 RLDRIE-----GVALTVEGRPVRVERPDW 261
>gi|300023505|ref|YP_003756116.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC
51888]
gi|299525326|gb|ADJ23795.1| folate-binding protein YgfZ [Hyphomicrobium denitrificans ATCC
51888]
Length = 298
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 22/273 (8%)
Query: 1 MSSV---YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
MSSV L+++ ++V G + LQ+++T ++ L AR + +L+PQGKIL F I
Sbjct: 1 MSSVKIARLTDRGVVRVDGADSEKLLQSLVTNEIEGLNAGEARFAGLLSPQGKILFDFFI 60
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS-- 114
+ E ++L++ +K L+ +L YKLR++V I + P V W+ ++
Sbjct: 61 VRT-EMGYLLDVAAAKAADLVKRLTMYKLRADVTITDASPGFAVYAVWDDGAAALTATRA 119
Query: 115 ---FIDERFSIADVLLHRTWGHNEKIASDIK-------TYHELRINHGIVDPNTDFLPST 164
F D R V W +D + Y LR+ G+ + DF
Sbjct: 120 CVHFNDPRHPAMGVR----WLMQSPPPADAQVVELAHIDYDALRVRLGVPEAGKDFEFGD 175
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
+PH+A DL NG+S TKGCY+GQE+V+R+Q++ ++RKR + I+ T L SG+ I D
Sbjct: 176 AYPHEADYDLFNGVSFTKGCYVGQEIVARMQNKTVVRKRVVKISATAPLI-SGAEIHLGD 234
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ IG +G V G LA+ R+D+ A K L
Sbjct: 235 VAIGRVGTVDGLHGLAMVRLDRAIEAQDKNQRL 267
>gi|162149036|ref|YP_001603497.1| aminomethyltransferase protein (glycine cleavage)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209545215|ref|YP_002277444.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl
5]
gi|161787613|emb|CAP57209.1| putative aminomethyltransferase protein (glycine cleavage)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532892|gb|ACI52829.1| folate-binding protein YgfZ [Gluconacetobacter diazotrophicus PAl
5]
Length = 291
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 9/269 (3%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KIEE 62
+L +++ + + G + FLQ +++ DV + A +A LTPQGK F + + +
Sbjct: 22 AFLPDRAVLAISGADRVSFLQGLVSNDVAAVAPGQAVWTAFLTPQGKWQADFFLFAEADG 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ +L+ + ++ D L +L Y+LRS+V I+ V +W +S+ +
Sbjct: 82 ERLLLDCEAAQADMLRQRLARYRLRSDVSIDPTG-FAVHAAWGAVPPMLDSAIGAPDPRL 140
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
A+ A+D Y R+ G+ D + D +A + LNGIS TK
Sbjct: 141 AEAGWRLILPRPTPDAADHAAYDAHRLALGLPDGSRDCEEGKTLLLEANFEALNGISWTK 200
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQE+ +R ++R ++R++ + ++G LPP G+P++ + E G + + LA+
Sbjct: 201 GCYMGQELTARTRYRGLVRRKLLPVSG-AALPPPGTPLMHGEKEAGIMASSRDGRGLAML 259
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHW 271
R+D + LT G V+ P W
Sbjct: 260 RLDH------RSAELTAEGHSVQVHIPSW 282
>gi|295687807|ref|YP_003591500.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756]
gi|295429710|gb|ADG08882.1| folate-binding protein YgfZ [Caulobacter segnis ATCC 21756]
Length = 264
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 13/268 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++++ I V G FLQ ++T DV TL R S +LTPQGK+L ++ ED
Sbjct: 7 ARLTSRAVIAVSGPDWRSFLQGLLTQDVETLAPGELRFSGLLTPQGKLLYDLFVAGT-ED 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L++ + RD+L+ +L Y+LR+ V +E + + D R
Sbjct: 66 GALLDVQAAHRDALLQRLSMYRLRAKVTLEASDRPVSAVFGG--AVAGQGLYADPRLPAL 123
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ + +D Y R+ G+ D+ +P +A DLL GI KG
Sbjct: 124 GARAY----DDRAANADEDAYDAHRLALGVP-GPADWGEEKTYPIEANFDLLAGIDFKKG 178
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C++GQE SR++ R I+ R + IT P G+ +L ++ G + +ALA+ R
Sbjct: 179 CFVGQETTSRMKRRGTIKNRMLPITFDGPPPAFGAEVLAGELRAGEVLGGRDGRALALLR 238
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
+D++D G LTV G V P W
Sbjct: 239 LDRID-----GADLTVDGRPVAVDRPAW 261
>gi|220920725|ref|YP_002496026.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060]
gi|219945331|gb|ACL55723.1| folate-binding protein YgfZ [Methylobacterium nodulans ORS 2060]
Length = 276
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L++++ + + G A FLQ +IT +V TLP AR A+L PQGKIL FL+S+
Sbjct: 1 MPIASLTDRAVLALTGDDAPGFLQGLITCNVETLPPDEARLGALLAPQGKILFDFLLSRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D F L+ R+ L+ +L Y+LR+ V P+ V +W E S D R
Sbjct: 61 G-DGFHLDAPRAVLPDLMRRLTLYRLRARVAFAQTPLR-VFAAWGAE--PEGSWLRDGRL 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L+ G + + + + RI G+ + DF FPH+ALMD L G+
Sbjct: 117 PALGWRLYAPEGGEPAVDATPEAFQAHRIALGVPESGADFALGDAFPHEALMDQLGGVDF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEVVSR+QHR R R + + P+G+P+ +G G G + L
Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPLLYPGAAVPAGTPVTAGARALGQTGSAAGDRGLG 236
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ R+D++ A+ G + G+ V+ + P
Sbjct: 237 LLRLDRLADAVAAGERVEAGGLSVRVAKPD 266
>gi|154251204|ref|YP_001412028.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
gi|154155154|gb|ABS62371.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
Length = 316
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 19/280 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--KIEED 63
LS + ++V G A FLQ ++T +V A +A+LTPQGK LL F I+ ++D
Sbjct: 26 LSKRGVLRVAGPEARSFLQGLVTNNVDLATGMTAIYAALLTPQGKFLLDFFIAADPADKD 85
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF--SNSSFIDERF 120
+L+ D ++ ++L+ +L YKLR+ V IE + V+ WN++ + F D R
Sbjct: 86 AVLLDCDGARAEALMKRLTMYKLRAKVTIEDLSEKLAVLALWNEDGSPLTEGPGFADPRL 145
Query: 121 SIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
G K S K YH LRI HG+ D DF P FP + +
Sbjct: 146 PGMGRRAILASGEVGKAISAAKAREAGEDEYHRLRIMHGVGDAAQDFEPDRTFPLEVNIA 205
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV- 232
LNGI KGC++GQEV SR + R +RKR + D+PP G+ + E+GT+
Sbjct: 206 ELNGIDFHKGCFVGQEVTSRTKRRGSVRKRLLPAHVEGDMPPHGTQVKGVAREVGTILSG 265
Query: 233 -VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ LA+ R+D + +G L ++ P W
Sbjct: 266 DAETSRVLALLRLD-----LIRGSVLEAGYAEIRPEVPSW 300
>gi|163793647|ref|ZP_02187622.1| Glycine cleavage T protein (aminomethyl transferase) [alpha
proteobacterium BAL199]
gi|159181449|gb|EDP65964.1| Glycine cleavage T protein (aminomethyl transferase) [alpha
proteobacterium BAL199]
Length = 302
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L ++ F+++ G + FLQ +++ DV + A A LT QGK L F + +
Sbjct: 6 YYFLQSRGFLRIDGPDRVAFLQGLVSNDVTKVTTDRAGYGAFLTAQGKFLFDFFMV-ADG 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110
D +L+ + + D +L YKLRS + + V+ +
Sbjct: 65 DALVLDTEGDRVDDFFKRLRMYKLRSKIELSQGGYRAAVVLGEEALAALGLPADRGVATP 124
Query: 111 --SNSSFIDERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTDFL 161
+++D R + + ++ + A+ ++ Y R+ G+ D + D
Sbjct: 125 FGGGVAYVDPRHAEMGARVLLPASADDGVLSVAGPSAASLEPYDRQRVALGLADGSRDMA 184
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+A + L G+ KGCY+GQE+ +R ++R ++++R + IT LP G+ I
Sbjct: 185 IEKTVLLEAGFEELGGVDFDKGCYMGQELTARTKYRGLVKRRLLPITINGPLPAPGTLIT 244
Query: 222 TDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
D E G + V V LA+ R+++++ A + GM L V AS P W K
Sbjct: 245 LDGREAGEVRSVIPNGDVNGTGLAMIRLNRLEEAFQAGMPLMAGESTVIASRPAWAK 301
>gi|240850203|ref|YP_002971596.1| aminomethyltransferase [Bartonella grahamii as4aup]
gi|240267326|gb|ACS50914.1| aminomethyltransferase [Bartonella grahamii as4aup]
Length = 290
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K
Sbjct: 6 NAICLKNRGLIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGKK- 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
E+ ++++I D+L +LL YKLR V I V +S N E N SSFID+R
Sbjct: 65 ENGYLIDIRMPLADTLHQRLLLYKLRKKVEITQPLQELVTVSLNNESDALNFDSSFIDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G + S+ T+++LRI + I + D+ +FPHD D +NGI
Sbjct: 125 FPQKEKII-RIYGKKPFLTSEYHDTWNQLRIRYAIAESGQDYEVGKVFPHDINYDQINGI 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCYIGQE+VSR+ HR R+R I+ G +L P S I +G LG V +A
Sbjct: 184 SFNKGCYIGQEIVSRMHHRRAARRRIFIVKGQCELTPQ-SSIEAGTKVLGYLGTCVENEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V ++ + TV + V +
Sbjct: 243 LALMRIDHVKDSMDHNIPFTVKNIPVTINIAE 274
>gi|254512369|ref|ZP_05124436.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
gi|221536080|gb|EEE39068.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
Length = 245
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ N+ +++ GK FLQ +IT D+ L + +A+LTPQGK L F + K +
Sbjct: 1 MPNRRILRLTGKDTDSFLQGLITNDIERLADGL-VYAALLTPQGKYLADFFL-KRDGKGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++D + D LI +L YKLR++V IE +N + D R S
Sbjct: 59 LLDVDEALADGLIKRLTMYKLRADVTIEATDLN----LQRGTGAAPEGALPDPRHSD--- 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + + D + +R+ I + + P + ++ D LNG+ KGCY
Sbjct: 112 LGWRAYSGAPE-SDDGSDWDAIRVRLCIPETGIELTPDSYI-LESGFDALNGLDFKKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK ++ T P G+ IL+ +G L G +A+A R D
Sbjct: 170 VGQEVTARMKHKTELRKGLRVVEVTGSAP-VGTEILSGGKPVGILFTQSGNRAIAYLRFD 228
Query: 246 KVDHAIKKGMAL 257
+ ++ G A+
Sbjct: 229 RAGGDMQAGDAV 240
>gi|260797653|ref|XP_002593816.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae]
gi|229279046|gb|EEN49827.1| hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae]
Length = 441
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 19/289 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKI 60
V L +S ++V G IPFLQ ++T DV +L A + IL QG++L L+ +
Sbjct: 147 KCVRLEERSLVRVAGSDTIPFLQGLVTNDVTSLNTENRALYTMILNVQGRVLYDVLMYNL 206
Query: 61 E-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFS--- 111
+ + +LE D + SLI L YK+R V I + V
Sbjct: 207 QSSPTSPPSLLLECDHTVVPSLIKLLKMYKIRKKVDICSVADEYTVWALLPGTSDPPVFV 266
Query: 112 ---NSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
S D R + G N + + YH R G+ + D
Sbjct: 267 SDTGLSVTDPRLPDLGNRVVLKSGTNLVFDCVEGTSTDYHTHRYQLGVGEGVNDLPTGNC 326
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTD- 223
P ++ + +LNG+S KGCY+GQE+ +R H +IRKR M I +GS + +
Sbjct: 327 TPLESNLAILNGVSFDKGCYVGQELTARTHHTGVIRKRLMPIILDRPASLEAGSTLTNEK 386
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+G G +A+ R+ + + V +KA P W+
Sbjct: 387 GKNVGKFRHAQGVHGIALVRLAHSQEKLYCKQE-SGEEVGLKAETPKWW 434
>gi|163737689|ref|ZP_02145106.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter
gallaeciensis BS107]
gi|161389215|gb|EDQ13567.1| glycine cleavage T protein (aminomethyl transferase) [Phaeobacter
gallaeciensis BS107]
Length = 246
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+SN+ +++ G FLQ +IT DV + + +A+LTPQGK L F ++ E D
Sbjct: 1 MSNRRILRLSGDDTRDFLQGLITNDVTKVDQGL-VYAAMLTPQGKYLADFFVA-AEGDDL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++D S SL +L Y+LR+ V IE + + D R
Sbjct: 59 LVDVDESLAPSLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD--- 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G D ++ +R+ H I + + P + +A + LNG+ KGCY
Sbjct: 112 LGWRMYGAQP--GDDGSDWNAIRVAHCIPETGIELGPDSYI-LEAGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK +T + P G+ I D +GTL G +A+A R D
Sbjct: 169 VGQEVTARMKHKTTLRKGLATVTVEGEAP-IGTEIRRADKPVGTLFTQAGDQAIAYLRFD 227
Query: 246 KVDHAIKKGMA 256
+ + A
Sbjct: 228 RAGADMCAQNA 238
>gi|167648315|ref|YP_001685978.1| folate-binding protein YgfZ [Caulobacter sp. K31]
gi|167350745|gb|ABZ73480.1| folate-binding protein YgfZ [Caulobacter sp. K31]
Length = 293
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L +++ I V G FL ++T +V TL R + +LTPQG++L ++
Sbjct: 9 LAHLDSRAVIAVSGPDWKSFLNGLLTQEVETLAPGELRFAGLLTPQGRLLHDLFVA-GAT 67
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSS---- 114
D +L++ RD+++ +L Y+LR+ V + P++ L +
Sbjct: 68 DGALLDVAADHRDAILARLTMYRLRAKVELAASPLDVFSQFSALPGEGPGPDPEAGSAPD 127
Query: 115 ---------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
F D R L R + + + + Y R+ G+ D
Sbjct: 128 ESGSRPSPGRADHGWFADPRLPS---LGARAYAQDLPVTASEDDYDAHRLAQGVP-GPAD 183
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ +P +A DLLNGI KGC++GQE SR++ R I+ R + I P G+
Sbjct: 184 WGTDRTYPIEANFDLLNGIDFKKGCFVGQETTSRMKRRGTIKTRMLPIAFDGPPPAFGTE 243
Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+L ++ G + +A+A+ R+D+V+ G ALTV G V P W
Sbjct: 244 VLAGELRAGEVLSGRDGRAMALLRLDRVE-----GAALTVDGRPVSVERPDW 290
>gi|217977284|ref|YP_002361431.1| folate-binding protein YgfZ [Methylocella silvestris BL2]
gi|217502660|gb|ACK50069.1| folate-binding protein YgfZ [Methylocella silvestris BL2]
Length = 279
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED- 63
+L+++ ++V G A FLQ +IT VL + +R SA+L+PQGK++ F + + E
Sbjct: 7 FLADRGVVRVLGAEAEKFLQRLITNSVLAIAPGESRFSALLSPQGKLMFDFFVVPLPEGP 66
Query: 64 --TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ + R++ L+ +L +K+R+ + IE V + S + R
Sbjct: 67 EAGYYFDCVRAQAPDLVKRLNLHKMRAKISIEDLSETLGVAALIAGEAPSGIGALVYRDM 126
Query: 122 IADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
A + R E + SD Y RI G+ DF+ F D +D LNG
Sbjct: 127 RAPGMGERVIASREALERISDSDESAYEARRIAAGVPRGGRDFVYGDAFVQDVNLDWLNG 186
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ KGCY+GQEVV+R+ +R +KR + + + P G I +G +G + G +
Sbjct: 187 VDFKKGCYVGQEVVARVHYRKSAKKRIVKFSFEGEPPAPGVEIAAGGPPLGQVGSISGSE 246
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ R+D+++ A G + + + P
Sbjct: 247 GLAMIRLDRLEDAKAAGAVVKAGETPIAVAAPE 279
>gi|224044548|ref|XP_002192875.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 320
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 25/294 (8%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLI 57
++ + ++ + V G A FLQ ++T DV L A + L QG+ L ++
Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRLLAEGDAPRALYAHALNAQGRCLYDVIL 82
Query: 58 SKI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF- 115
EE +LE D S DS+ L YK+R V I P + + +
Sbjct: 83 YSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLPKCAD 142
Query: 116 ------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFLPS 163
D R + L G N D++ YH R GI + D P
Sbjct: 143 QALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQGIPEGVKDLPPG 202
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP---- 219
P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + ++ + LP +G P
Sbjct: 203 VALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLLPVSFPEPLPAAGLPEGAE 262
Query: 220 -ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ GT G+ +A+ R+ + + + L H V++ A+ P W+
Sbjct: 263 ILTAAGKRAGTFRAGGGELGIALLRLAHLGEPLC--IPLGAHRVKLHAATPQWW 314
>gi|30424663|ref|NP_776146.1| putative transferase C1orf69 homolog, mitochondrial precursor [Mus
musculus]
gi|81899610|sp|Q8CAK1|CAF17_MOUSE RecName: Full=Putative transferase CAF17 homolog, mitochondrial;
AltName: Full=Iron-sulfur cluster assembly factor
homolog; Flags: Precursor
gi|26332703|dbj|BAC30069.1| unnamed protein product [Mus musculus]
gi|63102308|gb|AAH94909.1| RIKEN cDNA A230051G13 gene [Mus musculus]
gi|74223337|dbj|BAE21556.1| unnamed protein product [Mus musculus]
gi|123262723|emb|CAM17098.1| novel protein (4930543L23Rik) [Mus musculus]
Length = 358
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL + T ++ P A + L QG+ L
Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E +F+LE D S +L L YK+R V +E P V
Sbjct: 109 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 168
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
S ++ ++ER + R ++ A D++ YH+ R G
Sbjct: 169 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 288
Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LP SG + G G LA+ R + + + + V V A
Sbjct: 289 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 347
Query: 267 SFPHWY 272
P W+
Sbjct: 348 VVPDWW 353
>gi|163740727|ref|ZP_02148120.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
gi|161385718|gb|EDQ10094.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
Length = 246
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+SN+ +++ G FLQ +IT DV + + +A+LTPQGK L F ++ E D
Sbjct: 1 MSNRRILRLSGADTRDFLQGLITNDVTKVDQGL-VYAAMLTPQGKYLADFFVA-AEGDDL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++D S SL +L Y+LR+ V IE + + D R
Sbjct: 59 LVDVDESLAASLAKRLTMYRLRAKVTIEETDL----AVRRGTGPAPEGALADPRHPD--- 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G D ++ +R+ H I + + P + +A + LNG+ KGCY
Sbjct: 112 LGWRMYGAQP--GDDGSDWNAIRVAHCIPETGIELGPDSYI-LEAGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK +T + G+ I D +GTL G +A+A R D
Sbjct: 169 VGQEVTARMKHKTTLRKGLATVTVEGE-AAIGTEIRRADKPVGTLFTQAGDQAIAYLRFD 227
Query: 246 KVDHAIKKGMA 256
+ + A
Sbjct: 228 RAGADMCAQNA 238
>gi|195144438|ref|XP_002013203.1| GL23521 [Drosophila persimilis]
gi|194102146|gb|EDW24189.1| GL23521 [Drosophila persimilis]
Length = 340
Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 38/302 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLIS 58
+ L+++ I+V G +PFLQ ++T DV L + + L G++L ++
Sbjct: 32 TLEKLAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYAMFLNKGGRVLYDTIVY 91
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------- 104
+ E DT++LE DR + L +++R I++ I+ + W
Sbjct: 92 RTESPDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYVPWVLFNTEKCGEQVG 149
Query: 105 -----NQEHTFSNSSFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHELRIN 150
N+E SS D R L R S + Y LR
Sbjct: 150 EKLQRNKEWELFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSERNYQLLRYK 207
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T
Sbjct: 208 QGVGEGSEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLT 267
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
L + + +G + +A+ RI++V + L V G R A P
Sbjct: 268 APLGANQTVQSIAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELVVDGERCFAERPD 324
Query: 271 WY 272
W+
Sbjct: 325 WW 326
>gi|148675734|gb|EDL07681.1| RIKEN cDNA A230051G13 [Mus musculus]
Length = 370
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL + T ++ P A + L QG+ L
Sbjct: 61 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 120
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E +F+LE D S +L L YK+R V +E P V
Sbjct: 121 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 180
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
S ++ ++ER + R ++ A D++ YH+ R G
Sbjct: 181 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 240
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 241 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 300
Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LP SG + G G LA+ R + + + + V V A
Sbjct: 301 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 359
Query: 267 SFPHWY 272
P W+
Sbjct: 360 VVPDWW 365
>gi|125775558|ref|XP_001358983.1| GA20785 [Drosophila pseudoobscura pseudoobscura]
gi|54638724|gb|EAL28126.1| GA20785 [Drosophila pseudoobscura pseudoobscura]
Length = 340
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 38/298 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLISKIE- 61
L+++ I+V G +PFLQ ++T DV L + + L G++L ++ + E
Sbjct: 36 LAHRELIRVHGPEVLPFLQGLVTNDVSHLQRPDGPSSIYALFLNKGGRVLYDTIVYRTES 95
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104
DT++LE DR + L +++R I++ I+ W
Sbjct: 96 PDTYLLECDREASEEFRRHLRTFRVRRK--IDVDSIDDEYAPWVLFNTQKCGEKVGEKLQ 153
Query: 105 -NQEHTFSNSSFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHELRINHGIV 154
N+E + SS D R L R S Y LR G+
Sbjct: 154 RNKERKWFISS--DPRLPTLGTRILAPTDFNGLLRAKEMIVTPPSSENNYQLLRYKQGVG 211
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ + + P FP +A D LNG+S KGCY+GQE+ +RI H +IRKR M I T L
Sbjct: 212 EGSEELPPGKCFPLEANADFLNGVSFNKGCYVGQELTARIHHSGVIRKRYMPIRLTAPLG 271
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ + +G + +A+ RI++V + L V G R A P W+
Sbjct: 272 ANQTVQSLAGANLGRVFGHAHNHGVALLRIEQV---LNGHQELMVDGERCFAERPDWW 326
>gi|302384135|ref|YP_003819958.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC
15264]
gi|302194763|gb|ADL02335.1| folate-binding protein YgfZ [Brevundimonas subvibrioides ATCC
15264]
Length = 265
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 15/268 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L++++ I+V G A PFL ++T DV T+ R A+L+P G++L + E D
Sbjct: 6 AHLTSRALIRVSGTDAKPFLHNLLTQDVETIADGEVRFGAMLSPPGRLLFDLFLW-GEAD 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L++ +R +LI +L YKLR+ V I + SW + +D R S
Sbjct: 65 GVVLDVAADRRAALIQRLSMYKLRAQVEIA-ADERPALASWPG---VAAGFVVDPRTSAM 120
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
R G + A++ + R++ G+ DP D +P +A DLLNGI KG
Sbjct: 121 GG---RAIGDHVPDATE-ADHDAHRLSVGVPDPAADAGSDRTYPIEANFDLLNGIDFQKG 176
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C++GQE SR++ R I+KR + +T P +G+ +L + G + A+A+ R
Sbjct: 177 CFVGQETTSRMKRRGEIKKRMLPLTFDGAAPAAGTEVLNGALRAGEVLTGRDGAAMALVR 236
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
+D++D L V G V +P W
Sbjct: 237 LDRLDG------PLMVEGRPVAVLYPEW 258
>gi|74192523|dbj|BAE43049.1| unnamed protein product [Mus musculus]
Length = 358
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 36/306 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL + T ++ P A + L QG+ L
Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E +F+LE D S +L L YK+R V +E P V
Sbjct: 109 DVILYGLPECTEGAPSFLLECDSSVLGALQKHLSMYKIRRKVTVEPSPELHVWAVLPCVP 168
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
S ++ ++ER + R ++ A D++ YH+ R G
Sbjct: 169 QTSETAPLEERVEGTTMLIRDPRTARMGWRLLTQDDGPALVPRGQLGDLQDYHKYRYQQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELAARTHHTGVIRKRLFPVKLEGP 288
Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LP SG + G G LA+ R + + + + V V A
Sbjct: 289 LPASGVSPGAIVTVTATGQAAGKFRAGQGHVGLALLRSETIKGPLHIKTS-ESQLVAVTA 347
Query: 267 SFPHWY 272
P W+
Sbjct: 348 VVPDWW 353
>gi|195445833|ref|XP_002070506.1| GK10994 [Drosophila willistoni]
gi|194166591|gb|EDW81492.1| GK10994 [Drosophila willistoni]
Length = 353
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 34/302 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ ++T DV L + + L G++L +I
Sbjct: 41 TLEQLKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIY 100
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI 116
+ +T++LE DR L +++R + I+ + + + +
Sbjct: 101 RTNNPETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHA 160
Query: 117 -----------DERFSIADVLLHRT------------WGHNEKIASDIKT---YHELRIN 150
D R + W +NE +A+ Y LR
Sbjct: 161 THNLPELFVASDPRLPSLGTRVLAPTDISWAKLVKGFWQNNEVVATPATADNNYQLLRYK 220
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T
Sbjct: 221 QGVGEGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT 280
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
L + + +G + + +A+ RI++V + LTV G R A P
Sbjct: 281 APLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPE 337
Query: 271 WY 272
W+
Sbjct: 338 WW 339
>gi|157818919|ref|NP_001102297.1| hypothetical protein LOC363611 [Rattus norvegicus]
gi|293351521|ref|XP_002727760.1| PREDICTED: hypothetical protein [Rattus norvegicus]
gi|149052766|gb|EDM04583.1| rCG34648 [Rattus norvegicus]
Length = 358
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 76/306 (24%), Positives = 119/306 (38%), Gaps = 36/306 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ T P A + L QG+ L
Sbjct: 49 TCFRLDGRALMRVRGPDASPFLLGLLTNELPLSGPPAGATQPSARAAYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E F+LE D S +L L YK+R V +E P V
Sbjct: 109 DVIVYGLPECTEEAPGFLLECDSSVLGTLQKYLTMYKIRRKVAVEPHPELHVWAVLPCAP 168
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
S ++ ++ER + R + A D++ YH R G
Sbjct: 169 QTSEAAPLEERVEATTMLIRDPRTARMGWRLLTQDGGPAVVPRGQLGDLQDYHIYRYQQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 229 IPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVIRKRLFPVKLEGP 288
Query: 213 LPPSG------SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LP SG + G G LA+ R + + + + V V A
Sbjct: 289 LPASGISPGTLVTVTATGQAAGKFRAGQGHIGLALLRSETIKGPLHIKTS-ESQLVAVTA 347
Query: 267 SFPHWY 272
P W+
Sbjct: 348 MVPDWW 353
>gi|254419445|ref|ZP_05033169.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas
sp. BAL3]
gi|196185622|gb|EDX80598.1| Glycine cleavage T-protein (aminomethyl transferase) [Brevundimonas
sp. BAL3]
Length = 272
Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M LS+++ I + G+ A PFL ++T DV TL R A+L+P G++L I
Sbjct: 1 MPIARLSSRALISITGEEARPFLHNLLTQDVETLGDGELRFGALLSPPGRLLFDLFIL-G 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E + +L++ +R++LI +L YKLR+ V + V +W D R
Sbjct: 60 EAEGVLLDVAAERREALIQRLSMYKLRAKVQVA-ADDRPVFAAWPDA---PAGFIFDPRT 115
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ L+ + A Y + R++ G+ DP D I+P +A DLLNGI
Sbjct: 116 PLMGGRLYGEAAADATEA----DYDQHRLSVGVPDPTADAPQDKIYPIEADFDLLNGIDF 171
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----G 235
KGC++GQE SR++ R I+ R + I PP G+ +L ++ G + G
Sbjct: 172 QKGCFVGQETTSRMKRRGAIKNRMLAIDFDGPPPPFGAEVLKGELRAGEVLSGRQRSDGG 231
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
A+A+ RID++D LTV G V+ P W
Sbjct: 232 GSAMALLRIDRLDGD------LTVEGRPVRLRKPSW 261
>gi|254464189|ref|ZP_05077600.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I]
gi|206685097|gb|EDZ45579.1| glycine cleavage T protein [Rhodobacterales bacterium Y4I]
Length = 244
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S++ +++ G A FLQ ++T +V L + +A+LTPQGK + F ++ + D
Sbjct: 1 MSDRRILRLSGSDAKSFLQGLVTNNVDRLGDGL-VYAALLTPQGKYIADFFLA-ADGDAV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++D + L+ +L Y+LR++V +E+ + + + D R
Sbjct: 59 LLDVDAPLAEGLLKRLNMYRLRADVQVEMTELQ----VKRGTGAAPDGALEDPRHPAMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L+ G D + +R+ H I + + P + +A + LNG+ KGCY
Sbjct: 115 RLYGLEG-----GDDGSDWDAIRVAHCIPETGVELGPESYI-LEAGFEALNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + P G+ I GTL G K +A R D
Sbjct: 169 VGQEVTARMKHKTELRKGFRTVEVEGAAP-VGTEITAGGKPAGTLFTQSGGKGIAYLRFD 227
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 228 RAKGEMQAGDA 238
>gi|195453713|ref|XP_002073908.1| GK12899 [Drosophila willistoni]
gi|194169993|gb|EDW84894.1| GK12899 [Drosophila willistoni]
Length = 353
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 124/302 (41%), Gaps = 34/302 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ ++T DV L + + L G++L +I
Sbjct: 41 TLEQLKNRELIRVHGSEVVPFLQGLVTNDVTRLQHPEGPSSIYGLFLNKGGRVLYDTIIY 100
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN---- 112
+ +T++LE DR L +++R + I+ + + + +
Sbjct: 101 RTNNPETYLLECDRDASSEFRRNLRMFRVRKQIDIDSVDDEYSPWVIFTKNGGDGELVHA 160
Query: 113 -------SSFIDERFSIADVLLHRT------------WGHNEKIASDIKT---YHELRIN 150
D R S + W ++E +A+ Y LR
Sbjct: 161 THNLPELFVAADPRLSSLGTRVLAPTDISWAKLVKGFWQNSEVVATPATADNNYQLLRYK 220
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + + P FP +A D LNG+S KGCYIGQE+ +RI H +IRKR M I T
Sbjct: 221 QGVGEGVQELPPGKCFPLEANADFLNGVSFNKGCYIGQELTARIHHSGVIRKRYMPIRLT 280
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
L + + +G + + +A+ RI++V + LTV G R A P
Sbjct: 281 APLGSNHTVQSVAGANLGRVFGHAQNRGVALLRIEQV---LNGQQELTVDGDRCYAERPE 337
Query: 271 WY 272
W+
Sbjct: 338 WW 339
>gi|254476830|ref|ZP_05090216.1| aminomethyl transferase family protein [Ruegeria sp. R11]
gi|214031073|gb|EEB71908.1| aminomethyl transferase family protein [Ruegeria sp. R11]
Length = 246
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G A FLQ +IT DV + + +A+LTPQGK L F + E D
Sbjct: 1 MTTRRILRLTGSDARDFLQGLITNDVAKVDQGL-VYAALLTPQGKYLADFFVF-AEGDDL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++D S SL +L Y+LR++V I + + +D R D
Sbjct: 59 LIDVDESLAASLAKRLSMYRLRADVQISDTDLQ----VKRGTGPAPEGALMDPRH---DA 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G D + +R+ H I + P + +A + LNG+ KGCY
Sbjct: 112 LGWRLYGTEG--GDDGSNWDAIRVAHCIPQTGIELGPDSYI-LEAGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + + P SGS I + +GTL G +A R D
Sbjct: 169 VGQEVTARMKHKTELRKGLVTVAVSGSAP-SGSEIRRAEKPVGTLFTTEGAHGIAYLRYD 227
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 228 RAGDDMQAGEA 238
>gi|303227895|ref|NP_001026129.2| chromosome 1 open reading frame 69 [Gallus gallus]
Length = 332
Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 34/296 (11%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL--------PYKIARGSAILTPQGKILLYFLISKI 60
++ + V G A FLQ ++T DV L A + L QG+ L ++ ++
Sbjct: 33 RALLSVRGAEAAVFLQGLLTNDVTRLVAAGEGPAGPPRALYAHALNVQGRCLYDLIVYRL 92
Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
EE +LE D S D++ L YK+R V I + E S +
Sbjct: 93 HESQEEEPHILLECDSSVLDAIQKHLKLYKIRRKVSISPCLDLSLWAVVPGEQAGDISRY 152
Query: 116 --------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFL 161
D R + L G N +++ YH R GI + D
Sbjct: 153 ADRALVLTPDPRAEVMGWRLIIKAGANLPEIIPGSRIENVQDYHRHRYKQGIPEGVKDLP 212
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PSG 217
P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P G
Sbjct: 213 PGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPEG 272
Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ ILT+ G + +A+ R+ V+ + +A V++ AS P W+
Sbjct: 273 AEILTESGKAAGKFRAGGDELGIALLRLANVNEPLCLNVA--GDKVKLTASIPEWW 326
>gi|260433135|ref|ZP_05787106.1| aminomethyl transferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416963|gb|EEX10222.1| aminomethyl transferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 245
Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S + +++ G FLQ +IT D+ L + +A+LTPQGK + F + K + +
Sbjct: 1 MSTRRIVRLTGADTDSFLQGLITNDIRKLDDGL-VYAALLTPQGKYIADFFL-KRDGNGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ D+LI +L YKLRS V I+ + + + D R
Sbjct: 59 LLDVAEDLADTLIKRLGMYKLRSEVSIDETDL----HLQHGTGPAPQGAQPDPRHPD--- 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ R + + D + +R+ H I + + P T +A + LNG+ KGCY
Sbjct: 112 MGWRAYSPAPET-DDGTDWDAIRVRHCIPESGIELTPETYI-LEAGFERLNGVDFKKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + G + P G+ I++DD GTL G KA+A R+D
Sbjct: 170 VGQEVTARMKHKTQLRKGL-QVVGIEGAAPVGTQIMSDDKPAGTLFTQSGGKAIAHLRLD 228
Query: 246 KVDHAIKKGMA 256
+ ++ A
Sbjct: 229 RAGPDMRAADA 239
>gi|301619957|ref|XP_002939357.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 319
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 26/294 (8%)
Query: 3 SVYLSNQ-SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
L+ + +++ G FLQ +IT DV L A + +L QG+ L ++ ++
Sbjct: 22 CCPLTERRGLLQLRGPDPAMFLQGLITNDVQRLAEG-ALYAHLLNVQGRSLFDVILYRLP 80
Query: 62 ED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL----SWNQEHTFSN 112
+ +LE D + + L Y R VII P V S Q+ +
Sbjct: 81 TEHSETSAILLECDVAAVGPIQKHLSLYNFRRKVIICPCPELSVWAVISGSQKQDTQMPD 140
Query: 113 -----SSFIDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHGIVDPNTDFL 161
D R L G N E Y + R G+ + D
Sbjct: 141 LPSSVICAADPRVEAMGFRLVAQSGENPKKLLPETETGSYNEYTKHRYEQGVPEGVQDIP 200
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--PSGSP 219
P P ++ + +NGIS +KGCY+GQE+ +R H IIRKR + I + LP G+
Sbjct: 201 PGVALPLESNLVYMNGISFSKGCYLGQELTARTHHTGIIRKRLLPIRFSTPLPAEAEGAD 260
Query: 220 I-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
I + G G LA+ R+ + + + + V VKAS P W+
Sbjct: 261 ILTSAGKPAGKYRAGHGDIGLALLRMAHIGEELHIKPS-SGSSVSVKASIPEWW 313
>gi|58040450|ref|YP_192414.1| aminomethyltransferase [Gluconobacter oxydans 621H]
gi|58002864|gb|AAW61758.1| Aminomethyltransferase [Gluconobacter oxydans 621H]
Length = 281
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
YLS+++ + G FLQ +IT DV L A SA+LTPQG+ L F + D
Sbjct: 15 YLSHRAVLSFTGTDRASFLQGLITNDVQNLTDTTAVWSALLTPQGRWLSEFFLYATP-DR 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-NSSFIDERFSIA 123
+++ + L+ +L ++LR++V IE P + + + + +S +D R
Sbjct: 74 ILMDCPADHAEMLVKRLSRFRLRADVQIENTPFQVITGAEGRAVPETVLTSALDPRCEGT 133
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
T + + E R+ G+ D DF +A MDLL+G+S KG
Sbjct: 134 GWRAVVT--EPAQGGETPAAFLERRLTLGLPD-VMDFESEQTLALEADMDLLHGVSWKKG 190
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
CY+GQE+ +R +R ++++R + + P G I++ + E+G + G +ALA+
Sbjct: 191 CYMGQELTARTHYRGLVKRRLLPVVLSEGTFPNEGGVIVSGEREVGDIRSRSGNRALAML 250
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
R D LT +G + +P W+
Sbjct: 251 RRDAWSA-----SDLTCNGQPLSVVWPVWF 275
>gi|198424567|ref|XP_002123278.1| PREDICTED: similar to CG8043 CG8043-PA [Ciona intestinalis]
Length = 329
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 17/280 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++++ +++ GK I LQ ++T DV LP + +L QG+I LI +
Sbjct: 35 AKLNHRAVVQLGGKDTIEHLQGLVTNDVTLLPSSKCMYAMMLNTQGRIDHN-LILHWNDG 93
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSN-----SSFI 116
+++ D S+ D + L YKLR V I + + SWN+ + + +
Sbjct: 94 EVLIDCDESRADIFMKLLKRYKLRKKVEILERNDLNIWQSWNESCSNVMPDVKHHVCANP 153
Query: 117 DERFSIADVLLHR-TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R + + ++ + + K YH R G+ + + D P P ++ +D +
Sbjct: 154 DPRVKLMGWRVVSCDQPCDDVMMTSSKDYHIWRYKVGVPETDIDLPPGKSLPLESNLDFM 213
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILT-DDIEIGTLGVV 233
+GI+ KGCY+GQE+ +R H ++RKR + + +P G+ + + ++ G L V
Sbjct: 214 HGINFHKGCYLGQELTARTHHTGVVRKRLIPVEILEGKVPEPGTSLRSENNKSAGRLRGV 273
Query: 234 VGK-KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
VG LA+ ++D + T G ++K P W+
Sbjct: 274 VGGKHGLALIKLDYEGQILT-----TSGGTKLKGQRPLWW 308
>gi|297717822|gb|ADI50054.1| folate-dependent protein [Candidatus Odyssella thessalonicensis
L13]
Length = 293
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 31/295 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S+ LS+++ ++V G FLQ +I+ DV L ++A + +L+PQG+ LI +
Sbjct: 3 LSACLLSHRALVRVTGNDKATFLQGLISNDVNKLSPEVALFALLLSPQGRYQFD-LILHL 61
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------- 107
E + ++LE+D ++ SLI +L ++LRSNV E+ ++ W +E
Sbjct: 62 EGEDWLLEVDAARALSLIKRLSVFRLRSNVTFEVVEDRAILAVWGEEVASCLSLEGGLGE 121
Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNT 158
T ++ +D R L E+I + Y R GI +
Sbjct: 122 TQATSWGTAVLDPRLIALGARLIIRSEDVEQICHQYGIKLCSVSDYRYHRYQLGIPEGGE 181
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
+ P + MD LN I KGCY+GQE+ +R ++R ++RKR +
Sbjct: 182 EIEVDRAIPLEWGMDELNAIDWNKGCYMGQELTARTRYRGLVRKRIFPVYAPGITLEQ-- 239
Query: 219 PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
PIL + E+G LA+ R++ +D LT G + P W K
Sbjct: 240 PILAAETEVGHWIAKEQDWGLAMVRLNAID------AQLTCDGQVLTIICPSWMK 288
>gi|196002527|ref|XP_002111131.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens]
gi|190587082|gb|EDV27135.1| hypothetical protein TRIADDRAFT_54782 [Trichoplax adhaerens]
Length = 325
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 25/294 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ L +S +++ G A FLQ +IT D+ T A + +L P+G+IL L+ K
Sbjct: 31 IECAPLLERSLLRISGPDAATFLQGLITNDINTTEP--ASYAMLLNPKGRILYDILLYKN 88
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI- 116
+E+ ++LE D ++ + FYKLRS V I + + + W + + + +F
Sbjct: 89 RNDDEEYYLLECDVRVNTAIENHCKFYKLRSKVDI-VNVDQELAVWWAKYNDRESLAFKN 147
Query: 117 -------DERFSIADVLL----HRTWGHNEK--IASDIKTYHELRINHGIVDPNTDFLPS 163
D R + H+ + I + + Y + R+ GI + ++ +
Sbjct: 148 EPILRTKDPRLQKLGERIIIPRHKNLSEYAQNLINVNYQEYVDDRMKLGICEGVSEVITG 207
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSP 219
P + +D L+G+ KGCY+GQE+ +R H +IRKR M + D+ GS
Sbjct: 208 ESLPLEYNLDYLDGVKFDKGCYLGQELTARTYHTGVIRKRLMPVIFLNPIDDNAAFLGST 267
Query: 220 ILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+L D + G L + GK +A+ RI + V + AS P W+
Sbjct: 268 VLNDKNKNCGKLRALSGKYGVALLRIADSLSGLLSVKTTNNTEVTLTASKPLWW 321
>gi|296230768|ref|XP_002760882.1| PREDICTED: putative transferase C1orf69, mitochondrial-like
[Callithrix jacchus]
Length = 357
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ + L QG+ L
Sbjct: 49 TCFRLDERALLRVRGPDAAPFLLGLLTNELPLPGPAAGDAPPPPRAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E F+LE D S + +L L Y++R V +E P V +
Sbjct: 109 DVILYGLREHLEEMSGFLLECDSSVQGALQKHLALYRIRRKVTVEQHPDLRVWAVLPRSP 168
Query: 109 TFSNSSFIDER---------FSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
++ + ER + R NE A D+ YH+ R G
Sbjct: 169 EAFGAAPLQERAGTDAILIRDPRTPSMGWRLLTQNEGPALVPGGRLGDLWDYHQHRYLQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIGQE+ +R H IIRKR + D
Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGIIRKRLFPVRLLDP 288
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
LP SG + +G G LA+ R +K+ + + V + AS
Sbjct: 289 LPTSGISPGAEVLTESGQTVGKYRAGQGNVGLALLRSEKIKGPLHIRASKGAQ-VALAAS 347
Query: 268 FPHWY 272
P W+
Sbjct: 348 VPDWW 352
>gi|297661745|ref|XP_002809384.1| PREDICTED: putative transferase C1orf69, mitochondrial-like [Pongo
abelii]
Length = 357
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 75/305 (24%), Positives = 125/305 (40%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ A + L QG+ L
Sbjct: 49 TCFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ ++E F+LE D S + +L L Y++R V +E P V
Sbjct: 109 DVILYGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168
Query: 109 TFSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHG 152
++ + ER A +L+ R +E A D+ YH+ R G
Sbjct: 169 EACGAASLQERAGAATILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D
Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDP 288
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
LP SG + + +G G LA+ +K+ + + V + AS
Sbjct: 289 LPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347
Query: 268 FPHWY 272
P W+
Sbjct: 348 VPDWW 352
>gi|114573041|ref|XP_514253.2| PREDICTED: putative transferase CAF17, mitochondrial isoform 2 [Pan
troglodytes]
Length = 356
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 34/304 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ A + L QG+ L
Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
++ ++E F+LE D S + +L L Y++R V +E P V
Sbjct: 109 DVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPE 168
Query: 110 FSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHGI 153
++ + ER A +L+ R +E A D+ YH+ R G+
Sbjct: 169 ACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGV 228
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L
Sbjct: 229 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 288
Query: 214 PPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P SG + + +G G LA+ +K+ + + V + AS
Sbjct: 289 PTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 347
Query: 269 PHWY 272
P W+
Sbjct: 348 PDWW 351
>gi|56696136|ref|YP_166492.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
gi|56677873|gb|AAV94539.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
Length = 244
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ ++ +++ G FLQ +++ D+ L + +A+LTPQGK L F + + +++
Sbjct: 1 MPSRRILRLSGADTDSFLQGLVSNDIRKLDQGL-VYAALLTPQGKYLADFFLCR-DDEGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L+I S D+ + +L YKLR+ V I +N + D R
Sbjct: 59 LLDIAESLADATLKRLSMYKLRAAVEIGDSGLN----LQRGTGPAPAGALPDPRHP---T 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + + D + +R+ H I + + P + ++ + LNG+ KGCY
Sbjct: 112 LGWRAYTPAPE-SDDGSDWDAIRVAHCIPETGIELTPDSYL-LESGFEALNGLDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + G+ I D +G L G A+A R D
Sbjct: 170 VGQEVTARMKHKTELRKGLARV-AIEGAAEPGTEITADGKPVGVLHTRAGDHAIAYLRFD 228
Query: 246 KVDHAIKKGMA 256
+ + G A
Sbjct: 229 RAGGEMSAGEA 239
>gi|321463826|gb|EFX74839.1| hypothetical protein DAPPUDRAFT_199709 [Daphnia pulex]
Length = 326
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 21/284 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYK--IARGSAILTPQGKILLYFLI-SKIEE 62
L ++ +KV G A P+LQ ++T D+ L L QG+IL +I S E
Sbjct: 32 LKGRAIVKVSGVDAGPYLQGLMTNDIKHLDEDNNPNMYCMFLNRQGRILYDAIIHSSKES 91
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
++++E D +SL L +++R V+I I+ + ++Q ++ I R
Sbjct: 92 GSYLIECDAECSESLAKHLTMFRVRRKVVISIEETLKPWVLFDQPPEDLSNEVILARDPR 151
Query: 123 ADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
L R + K S + Y ELR G+ + + D P T FP + D
Sbjct: 152 VKELGWRVLVDSNKSLSHLIKNLCVDNTDRYTELRYKLGVGEGSPDMPPGTCFPLECNCD 211
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L+G+S KGCY+GQE+ +R H + RKR M + D +G +
Sbjct: 212 YLHGVSFHKGCYLGQELTARTYHTGVTRKRLMPVVFQQPSDSIQLESTISDENGQRVGKL 271
Query: 234 VGK-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G L + RI++ L + ++ P W+
Sbjct: 272 RGYLHGSVYGLGLLRIEQAL----SSSQLKIDSNLIETHRPAWW 311
>gi|313236585|emb|CBY19877.1| unnamed protein product [Oikopleura dioica]
Length = 308
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 3 SVYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+V LS+ +S I + G+ A LQ +IT D+ L + + S L +G++ ++ +
Sbjct: 19 AVDLSDWRSLISIRGEDAKALLQGVITNDISNLQHVGSMYSMFLNAKGRVYFDAILYHLN 78
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN-QEHTFSNSSFIDE 118
ED ++E D+ L L YK+R V I + + VV + + +FID
Sbjct: 79 EDEILIEGDKILSAKLKKHLSMYKIRRKVNIHAINESVWHVVPGDDILDLGTLGDTFIDP 138
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R R + ++ YH R GI + + + FP + DL++G+
Sbjct: 139 RLEKMGA---RVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECNCDLMSGV 195
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-VGKK 237
S KGCY+GQE+ +R H + RKR + + + P + + G + V
Sbjct: 196 SFHKGCYLGQELTARTFHTGVTRKRIVPLKLS---PGNDVSDIKAKRSAGKIITVDSEGN 252
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
LA+ R D D +K V + + P W+
Sbjct: 253 GLAMFRTDNFDKTVK------VGEEEIVITKPSWW 281
>gi|311249489|ref|XP_003123660.1| PREDICTED: putative transferase C1orf69 homolog, mitochondrial-like
[Sus scrofa]
Length = 354
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 32/298 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISKIE 61
L ++ ++V G + PFL ++T ++ A + L QG+ L ++ +
Sbjct: 53 LGERALVRVRGPDSAPFLLGLLTNELPLPGSASAVARAGYAHFLNVQGRTLYDVILYGLP 112
Query: 62 E-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
E TF+LE D S D+L L+ +++R V +E P V + S
Sbjct: 113 EHSDEQPTFLLECDSSVLDALQRHLVLHRIRRKVTVEPCPELRVWAVLPCAPEEAGRSVP 172
Query: 117 DE----------RFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTD 159
+ R + R +E A D++ YH R G+ + D
Sbjct: 173 LQEKAQCTTILTRDPRTARMGWRLLSQDEGSALVPGGRPGDLQDYHRHRYQQGVPEGVHD 232
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----P 215
P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + + LP
Sbjct: 233 LPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHTGVIRKRLFPVQLSGRLPVGSIA 292
Query: 216 SGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ +LT+ G +G LA+ R +K+ + + V + AS P W+
Sbjct: 293 PGTSVLTESGQAAGKYRAGLGDVGLALLRTEKIKGPLHIRTS-ESGLVALTASVPDWW 349
>gi|58197556|ref|NP_001010867.1| putative transferase C1orf69, mitochondrial precursor [Homo
sapiens]
gi|74744873|sp|Q5T440|CAF17_HUMAN RecName: Full=Putative transferase CAF17, mitochondrial; AltName:
Full=Iron-sulfur cluster assembly factor homolog; Flags:
Precursor
gi|55959201|emb|CAI15071.1| chromosome 1 open reading frame 69 [Homo sapiens]
Length = 356
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 34/304 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR--------GSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ A + L QG+ L
Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
++ ++E F+LE D S + +L L Y++R V +E P V
Sbjct: 109 DVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPE 168
Query: 110 FSNSSFIDERFSIADVLL---------HRTWGHNEKIA-------SDIKTYHELRINHGI 153
++ + ER A +L+ R +E A D+ YH+ R G+
Sbjct: 169 ACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGV 228
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D L
Sbjct: 229 PEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPL 288
Query: 214 PPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P SG + + +G G LA+ +K+ + + V + AS
Sbjct: 289 PTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASV 347
Query: 269 PHWY 272
P W+
Sbjct: 348 PDWW 351
>gi|270006859|gb|EFA03307.1| hypothetical protein TcasGA2_TC013249 [Tribolium castaneum]
Length = 336
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 38/302 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEED 63
L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E+
Sbjct: 27 PLNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSEN 86
Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS------- 114
T+++E D D L L Y++R + I + + ++ ++ NS+
Sbjct: 87 NTYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPP 146
Query: 115 -------------FIDERF--------SIADVLLHRTWGHNEKI--ASDIKTYHELRINH 151
+ D R + +DV + G N + S K Y LR +
Sbjct: 147 LETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSL 206
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + +
Sbjct: 207 GVGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK 266
Query: 212 -DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
I+ +++ +G L + G LA RI K + + GV V S P
Sbjct: 267 IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLG---DGVAVT-SRPS 322
Query: 271 WY 272
W+
Sbjct: 323 WW 324
>gi|189237667|ref|XP_001812410.1| PREDICTED: similar to GA20785-PA [Tribolium castaneum]
Length = 968
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 38/302 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISKIEED 63
L+N+S I+V G FLQ +IT D+ L + L G+IL ++ + E+
Sbjct: 659 PLNNRSLIRVAGPDVSNFLQGLITNDIEHLSSGPGCMYTMFLNSAGRILYDAIVYRNSEN 718
Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS------- 114
T+++E D D L L Y++R + I + + ++ ++ NS+
Sbjct: 719 NTYLVECDTKSADILQKHLKLYRVRRKIDITSLSDELKIYALFDTKNFDLNSNQKLANPP 778
Query: 115 -------------FIDERF--------SIADVLLHRTWGHNEKI--ASDIKTYHELRINH 151
+ D R + +DV + G N + S K Y LR +
Sbjct: 779 LETPFKAHKELLIYRDPRITNLGLRIIAKSDVNVPEQLGDNFNVTQNSSSKNYRWLRYSL 838
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + D P FP + D L+G+S KGCY+GQE+ +R+ H ++RKR M + +
Sbjct: 839 GVGEGVEDLPPGECFPLECNCDYLHGVSFHKGCYVGQELTARVHHTGVVRKRLMPLHFSK 898
Query: 212 -DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
I+ +++ +G L + G LA RI K + + GV V S P
Sbjct: 899 IPTKYPDEKIVQENVSLGKLRGIEGDVGLASLRIAKTLAFKELKLG---DGVAVT-SRPS 954
Query: 271 WY 272
W+
Sbjct: 955 WW 956
>gi|156540479|ref|XP_001600004.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
vitripennis]
Length = 365
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 54/321 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKI 60
S V L ++ +++ G FLQ +IT D+ L A S L +G++L +I K
Sbjct: 33 SLVQLDQRTLLRLSGDQVSDFLQGLITNDMRHLKEGAASIYSVFLNIKGRVLYDAIIYKT 92
Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------INGVVLSWNQ---- 106
+++ F +E D S +SL L YKLR V I + +V +Q
Sbjct: 93 QDEKVFYVECDSSIVNSLSKHLKMYKLRRKVEIHTEDNSMKVWTAYDPDIVSHVDQKEVE 152
Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRT------------------WGHNE 135
++S +D F +D L++ N
Sbjct: 153 KKSNFEGKIFPCGASDSTSSKLVDNIFIYSDPRLYQLGLRILTQSTVTCDEIIKQLEPNV 212
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ +Y E R G+ + D P T FP + D L+G+S KGCYIGQE+ +R
Sbjct: 213 TTQQNASSYREFRYKLGVGEGVQDLPPGTSFPLEINCDYLHGVSFHKGCYIGQELTARTH 272
Query: 196 HRNIIRKRPMIITGTDDLPPS---GSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAI 251
H ++RKR M ++ I + +G + G L + RI A+
Sbjct: 273 HTGVVRKRLMPLSFDKVYEKPLMYDDQITNEAGKIVGKIRGQKGIFGLGLIRI---ADAL 329
Query: 252 KKGMALTVHGVRVKASFPHWY 272
+ LTV +K PHW+
Sbjct: 330 ASKI-LTVGDCTLKVVKPHWW 349
>gi|159044636|ref|YP_001533430.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12]
gi|157912396|gb|ABV93829.1| hypothetical protein Dshi_2092 [Dinoroseobacter shibae DFL 12]
Length = 261
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 11/248 (4%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++ I+V G+ A FLQ ++T D+ +A+L+PQGK L F + ++D +L+
Sbjct: 19 RAVIRVTGRDARDFLQGMVTNDLAKGLEHGLVYAALLSPQGKYLADFFVL-AQDDALLLD 77
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ L+ +L +KLR++V +E + + D R L+
Sbjct: 78 APEALAPDLLKRLTMFKLRADVTLEKTEMPVA----RGLGPAPEGALADPRDPALGWRLY 133
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
G E + + LR+ H + + T+ +P+ + + + L+G+ KGCY+GQ
Sbjct: 134 GVAGGPE-----VTDWDALRVAHLVPEAGTELIPNDSYILEMGFERLHGVDFKKGCYVGQ 188
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EVV+R++H+ +RK + + P G I +G LG G +ALA R D+
Sbjct: 189 EVVARMKHKTELRKGLARVAVAGEAAP-GDEITAGGKPVGVLGTRSGDRALAYLRFDRAT 247
Query: 249 HAIKKGMA 256
++ G A
Sbjct: 248 GPMEAGAA 255
>gi|126739975|ref|ZP_01755665.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
gi|126718794|gb|EBA15506.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
Length = 246
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ G FLQ +IT DV L + + +A+LTPQGK + F ++ E +L+
Sbjct: 4 RKILRLSGPDTRSFLQGLITNDVNKLDHGL-VYAALLTPQGKYIADFFLAPAGE-AVLLD 61
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D S + L +L Y+LR+ V IE + + D R S L+
Sbjct: 62 VDESLAEGLAKRLSMYRLRAAVEIETTDLQ----VKRGTGEAPEGALSDPRHSAMGWRLY 117
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
G D ++ +R+ H I + + + P + +A + LNG+ KGCY+GQ
Sbjct: 118 GDEG-----GDDGSNWNAIRVAHCIPETSIELGPDSYI-LEAGFERLNGVDFRKGCYVGQ 171
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + + T + P SGS I D +GTL +A+A R D+
Sbjct: 172 EVTARMKHKTELRKGLVTVKVTGEAP-SGSEIKRQDKAVGTLFTSADGQAIAYLRYDRAG 230
Query: 249 HAIKK 253
++
Sbjct: 231 EDMEA 235
>gi|312216597|emb|CBX96547.1| hypothetical protein [Leptosphaeria maculans]
Length = 401
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 77/310 (24%), Positives = 122/310 (39%), Gaps = 41/310 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---- 58
S L+++S I + G A FLQ +IT +V + +A L +G++L I
Sbjct: 78 SAPLAHRSLISLSGPDAAKFLQGLITNNVDA-SRQAPFYAAFLDARGRVLWDVFIWVWPE 136
Query: 59 ---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----- 110
+ +E+D+++ +L L +KLRS V IE G+ +W
Sbjct: 137 LVAEKGHWACYIEVDQTEAGALKKHLKRHKLRSKVTIEDAESVGIWAAWGDAPAQVPKEN 196
Query: 111 SNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+ S D R L RT + D+ YH R G+ + + + P
Sbjct: 197 AVSDLQDPRAPGLHRYLVAHDRTSLADRSEVLDVSEYHLQRYLLGVPEGPVEIPRESALP 256
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-----LPPSGSPI-- 220
+ +DL +GI KGCY+GQE+ R +H ++RKR + I P SG+ I
Sbjct: 257 MECNIDLSSGIDFKKGCYVGQELTIRTKHTGVVRKRMLPIQLEHPGASVSPPVSGTDIKQ 316
Query: 221 ------LTDDIEIGTLGVVVGKKALAIARID--------KVDHAIKKGMALTVHG----V 262
G VG+ LA+ R++ + K GM V V
Sbjct: 317 LDDDGRTKRGRAAGKFIAGVGQVGLALCRLEMMTSMKVSAEGGSWKPGMQFGVDTDNGVV 376
Query: 263 RVKASFPHWY 272
+VK W+
Sbjct: 377 KVKPVLHDWF 386
>gi|254439032|ref|ZP_05052526.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
gi|198254478|gb|EDY78792.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
Length = 247
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 15/252 (5%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N++ I++ G + FLQ +IT DV +A+LTPQGK + F ++ ++ ++
Sbjct: 3 NRTLIRLSGPDTVEFLQGLITNDVAK-TSGGLVYAALLTPQGKYIADFFVT-AQDGALLI 60
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
++ S L +L Y+LRS+V I P+ L T NS+ D R + L
Sbjct: 61 DVATSHAAMLAQRLTMYRLRSDVQIAEAPL----LVSRGTGTAPNSALPDPRHA---ALG 113
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
R ++ SD + LR+ H I + + P T +A + LNG+ KGCY+G
Sbjct: 114 WRLIAATDQ--SDDTDWDALRVAHVIPETGIELTPETYI-LEAGFERLNGVDFRKGCYVG 170
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVVGKKALAIARI 244
QE+ +R++H+ ++K ++ + P P G+ I T+ GTL G ALA R
Sbjct: 171 QEIAARMKHKTELKKGLAQVSISGVAPAKFPMGTEITTNGRPAGTLYTQSGGLALAHLRF 230
Query: 245 DKVDHAIKKGMA 256
D+ ++ G A
Sbjct: 231 DRATGDMQAGGA 242
>gi|114763433|ref|ZP_01442840.1| aminomethyl transferase family protein [Pelagibaca bermudensis
HTCC2601]
gi|114543971|gb|EAU46982.1| aminomethyl transferase family protein [Roseovarius sp. HTCC2601]
Length = 244
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 20/259 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + ++V G A FLQ ++T DV L + +A+LTPQGK F + ED +
Sbjct: 3 SERKVLRVSGPEAEQFLQGLVTNDVAGLKDGL-VYAAMLTPQGKYRADFFLVPKGED-IL 60
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+++D + L L YKLRS V I + +FID R
Sbjct: 61 IDVDAALAPDLQRMLTMYKLRSKVEIVETD----IAVTRGTGPEPEGAFIDPRDPRMGWR 116
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ + + + LR+ + + + P T F +A + LNG+ KGCY+
Sbjct: 117 GY------DGQTGEEADWDALRVAACVPESGVELTPDT-FILEAGFERLNGVDFRKGCYV 169
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
GQEV +R++H+ +RK + + P GS IL + GTL +A R D+
Sbjct: 170 GQEVTARMKHKTELRKGLAQVDVSGSAP-VGSDILAGEKTAGTLYTQAEGHGIAYLRFDR 228
Query: 247 VDHAIKKGMALTVHGVRVK 265
+ T G V+
Sbjct: 229 AKGDM------TADGATVR 241
>gi|86136583|ref|ZP_01055162.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
gi|85827457|gb|EAQ47653.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
Length = 266
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ G A FLQ +IT+DV + + +A+LTPQGK L F ++ ED +L+
Sbjct: 26 RKILRLSGADARDFLQGLITSDVNKIDQGL-VYAALLTPQGKYLADFFLAADGED-ILLD 83
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + ++L+ +L Y+LR+ V I + + D R + L
Sbjct: 84 ADADQAEALMKRLTMYRLRAKVEITETDLK----VKRGTGAAPAGALADPRHAE---LGW 136
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R G ++ +D + L + H I + P + ++ + LNG+ KGCY+GQ
Sbjct: 137 RLIGS--EVGADESDWDALHVAHCIPRSGIELGPDSYI-LESGFEALNGVDFRKGCYVGQ 193
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK ++ T P GS I +GT+ +A+A R D+
Sbjct: 194 EVTARMKHKTELRKGLRVVEITGSAP-VGSEITAGGKAVGTVFTQSNGQAIAYLRFDRAK 252
Query: 249 HAIKKGMA 256
+ G A
Sbjct: 253 GEMTAGDA 260
>gi|329663396|ref|NP_001192509.1| IBA57, iron-sulfur cluster assembly homolog [Bos taurus]
gi|297476223|ref|XP_002688553.1| PREDICTED: hypothetical protein [Bos taurus]
gi|296486216|gb|DAA28329.1| hypothetical protein BOS_7084 [Bos taurus]
Length = 358
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/306 (24%), Positives = 122/306 (39%), Gaps = 36/306 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G + PFL ++T ++ A + L QG+ L
Sbjct: 49 ACFLLGERALVRVRGPDSAPFLLGLLTNELPLPGPAVGEASTSARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + E TF+LE D S D+L LL +K+R V +E P V
Sbjct: 109 DVILYGLPERSSEQPTFLLECDSSVVDALQRHLLLHKIRRKVTVEPCPELRVWAVLPCAQ 168
Query: 109 TFSNSS----------FIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINH 151
+ + + R + R +E A D++ YH R
Sbjct: 169 REAGGAGPLRKKTVCAPVLTRDPRTYRMGWRLLSQDEGSALVPGGRLGDLQDYHRHRYQQ 228
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + D P P ++ + +NGIS TKGCYIGQE+ +R H +IRKR + +
Sbjct: 229 GVPEGVHDLPPGVALPLESNLAFMNGISFTKGCYIGQELTARTHHMGVIRKRLFPVQFSG 288
Query: 212 DLP-----PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+P P S + G +G LA+ R +K+ + + V + A
Sbjct: 289 AVPGGGIAPGASVLTESGQAAGKYRAGLGDVGLALLRSEKIKGPLHIRTS-ESGLVALTA 347
Query: 267 SFPHWY 272
S P W+
Sbjct: 348 SVPDWW 353
>gi|195390113|ref|XP_002053713.1| GJ23197 [Drosophila virilis]
gi|194151799|gb|EDW67233.1| GJ23197 [Drosophila virilis]
Length = 344
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 31/299 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLIS 58
+ L + I+V G +PFLQ ++T DV L + + L G+++ +I
Sbjct: 35 TLEPLRQRELIRVHGAEVVPFLQGLVTNDVSRLQEANGPSSMYALFLNRGGRLMYDTIIY 94
Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQ--------EH 108
+ + DTF+LE DR L Y++R + I+ V + +N+
Sbjct: 95 RTNDPDTFLLECDRDASSDFRRHLRMYRVRKRIDIDTVDDEYVPWVIFNENGRGDIRTHK 154
Query: 109 TFSNSSFIDERFSIADVLL------------HRTWGHNEKIA---SDIKTYHELRINHGI 153
D R + W +++ +A + Y LR GI
Sbjct: 155 AMDLFIAPDPRVGSMGTRVLAPADLNSTKLSKDLWRNHDVVAINPTPDSNYKLLRYKQGI 214
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T +
Sbjct: 215 GEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFTAPV 274
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ + +G + +A+ RI+ V + L + G R PHW+
Sbjct: 275 SSNQTVKSVAGANLGRVFGHAHNHGVALLRIEPV---LHGDQQLVLDGERCFVDRPHWW 330
>gi|109017947|ref|XP_001083460.1| PREDICTED: putative transferase C1orf69, mitochondrial [Macaca
mulatta]
Length = 357
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--------ARGSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ A + L QG+ L
Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPLARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEE-----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ ++E F+LE D S + +L L Y++R V +E P V
Sbjct: 109 DVILYGLQEHSEEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168
Query: 109 TF---------SNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
+ ++ I R + R +E A D+ YH+ R G
Sbjct: 169 EAYGNAPLQESAGAAAILIRDPRTARMGWRLLTQDEGPALVSGGRLGDLWDYHQHRYLQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + D
Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDP 288
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
LP SG + + +G G LA+ +K+ + + V + AS
Sbjct: 289 LPASGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347
Query: 268 FPHWY 272
P W+
Sbjct: 348 VPDWW 352
>gi|195112764|ref|XP_002000942.1| GI10516 [Drosophila mojavensis]
gi|193917536|gb|EDW16403.1| GI10516 [Drosophila mojavensis]
Length = 344
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 119/301 (39%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58
+ L + I+V G +PFLQ ++T DV L + + L G++L +I
Sbjct: 35 TLEPLHQRELIRVHGAEVVPFLQGLVTNDVSRLQEPSGPSSMYALFLNRGGRLLYDTIIY 94
Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----------NQ 106
+ + DTF+LE DR L Y++R I+I I+ + W
Sbjct: 95 RTNDPDTFLLECDRDASSDFRRHLRTYRVRKR--IDIDTIDDEYVPWVLFNGKGRGNIRT 152
Query: 107 EHTFSNSSFIDERFSIADVLL------------HRTWGHNEKIA---SDIKTYHELRINH 151
D R I + W H++ +A + Y LR
Sbjct: 153 HKAMDLFIAPDPRIGIMGTRVLAPGDINATKLTKDLWCHHDVVAVNSTPENNYKLLRYKQ 212
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M I T
Sbjct: 213 GIGEGVEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFTA 272
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ + +G + +A+ R++ V + L + G R P W
Sbjct: 273 PVSNHFTVKSVAGANLGRVFGHAHNHGVALLRVEPV---LNSEQQLMLDGERCYVDRPSW 329
Query: 272 Y 272
+
Sbjct: 330 W 330
>gi|254293508|ref|YP_003059531.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814]
gi|254042039|gb|ACT58834.1| folate-binding protein YgfZ [Hirschia baltica ATCC 49814]
Length = 274
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 11/269 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+ + V G A FL ++T VL + +R +A+L PQGKI+ L+ K E
Sbjct: 5 VCLENRVVLCVDGVDAETFLNGLLTNSVLNMEMGQSRYAALLMPQGKIICDLLLLKT-ET 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F+L++ ++L+ +L ++L++ V I ++ GV F + D R
Sbjct: 64 GFLLDVPAQADEALMKRLKMFRLKAQVDISLKDDLGVYA-------FIDDGHPDPRHP-- 114
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
D+ + + + K Y+ RI + + DF + +FP D MDLLNGI KG
Sbjct: 115 DMPKRQIGPKDLWENTSRKDYNITRIKLNVPELGKDFGDNEVFPADINMDLLNGIDFKKG 174
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
C++GQEVVSR++ R R+R + + P + +P+ + +G + ALA R
Sbjct: 175 CFVGQEVVSRMKRRGTARRRTLAFHFPNGAPDATTPLYLGETLLGEISSSTSDYALARIR 234
Query: 244 IDKVDHAIKKGM-ALTVHGVRVKASFPHW 271
ID++ A +G + + P W
Sbjct: 235 IDRLAKAQAEGQTEFIAADKKAELISPDW 263
>gi|163747204|ref|ZP_02154559.1| aminomethyl transferase family protein, putative [Oceanibulbus
indolifex HEL-45]
gi|161379479|gb|EDQ03893.1| aminomethyl transferase family protein, putative [Oceanibulbus
indolifex HEL-45]
Length = 248
Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ I+T D+ L +A+LTPQGK + F + D
Sbjct: 1 MTTRRILRLTGPDTRDFLQGIVTNDIAKLDQGP-VYAALLTPQGKYMADFFLIAAG-DGV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++D S D L +L YKLR+ V IE + + D R
Sbjct: 59 LLDVDESLGDMLTQRLSMYKLRAKVTIEPTEL----HLHRGTGPAPEDAVADPRHPEMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+R + ++ LR+ H I + + P T F +A +D +NG+ KGCY
Sbjct: 115 RAYRDTPQTDDTT----DWNALRVAHLIPETGVELTPDT-FILEAGLDRINGLDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + P G+ I + GTL +ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLTRVDVKGSAAP-GTAITAEGKPAGTLYTQADGQALAHLRFD 228
Query: 246 KVDHAIKKGMA 256
+ ++ A
Sbjct: 229 RAKGPMQADEA 239
>gi|332374088|gb|AEE62185.1| unknown [Dendroctonus ponderosae]
Length = 343
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 42/306 (13%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE-E 62
+L +S ++V G A FLQ +IT D+ L + + + L +G+IL LI K E +
Sbjct: 27 HLKERSLVQVKGPDASNFLQGLITNDINHLSDRVGSMFAMFLNIRGRILFDTLIYKTEVK 86
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV------------------VLSW 104
D + +E DR +L L YK++ V I V V+
Sbjct: 87 DEYWVECDRIASTTLQKHLKMYKVKRQVDITGLDDYEVHVLYSSKFLDTSVTDFKSVIEN 146
Query: 105 NQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKI------ASDIKTYHEL 147
+ F SS F D R + + + D +Y +L
Sbjct: 147 AGKSDFPESSAGFRSFNSLLIFKDPRVPHMGFRILSKRIDVQSVLNSLVECDDSNSYRKL 206
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ + GI + D L + FP + D L+G+S KGCYIGQE+ +R H +IRKR M +
Sbjct: 207 KFSLGIGEGIEDLLSGSSFPLECNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPL 266
Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ I+ + +G L + G LA+ R V A++ G ++TV
Sbjct: 267 HFSKVPTALPEGNIVINKSNLGKLRGIEGNVGLALLR---VAEALELG-SITVGNGEASI 322
Query: 267 SFPHWY 272
P W+
Sbjct: 323 VKPFWW 328
>gi|156386911|ref|XP_001634154.1| predicted protein [Nematostella vectensis]
gi|156221234|gb|EDO42091.1| predicted protein [Nematostella vectensis]
Length = 330
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 22/289 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLISKI-- 60
L + ++V G ++ FLQ ++T ++ + + L QG++L ++SK
Sbjct: 36 LDKRCILRVSGPDSVKFLQGLVTNNIELFHGDSTIRSMYTMFLNAQGRVLYDAILSKDKT 95
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-------INGVVLSWNQEHTFS 111
E +F +E DRS +L L F+KLRS I + ++ E +
Sbjct: 96 HSETPSFFIECDRSISAALTKHLKFFKLRSKADISHAEGLVPWTVFSEEIVDLKPEEDWK 155
Query: 112 NSSFI-DERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIVDPNTDFLPST 164
+ S + D R L + + Y E R G+ + + +
Sbjct: 156 DFSIVPDPRVKKLGHRLILPSDTDPSACIEGAGHAPRGAYEEHRARLGVCEGEEEIPIAN 215
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD- 223
P + +D LNG+S KGCYIGQE+ +R H +IRKR M T + SG+ I T+
Sbjct: 216 AMPLEYNLDFLNGVSFHKGCYIGQELTARTHHTGVIRKRIMPFTIASNNISSGAAIKTEA 275
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G + +V G+ L + R+ + A ++ P W+
Sbjct: 276 GKASGKVCIVHGQYGLGMIRLANLKAGKLLVEAKDGQHTEMRPYVPDWW 324
>gi|47220333|emb|CAF98432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 30/300 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISK 59
+ +L +++ +++ G FLQ +IT DV L P K A + +L QG+ L ++ +
Sbjct: 20 ACYHLPHRTVVRLQGPDTGLFLQGLITNDVGLLEEPGKGAMYAHMLNVQGRTLFDIMLYR 79
Query: 60 IEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS- 114
++E +E D + +L+ YKLR + I P V ++ ++
Sbjct: 80 LKESDAGLGVFVECDSTVEAALLRHFKMYKLRKKLHINPCPELSVWAVLPKQRPTEQAAS 139
Query: 115 -------------FIDERFSIADVLLHRTWGHNEKI------ASDIKTYHELRINHGIVD 155
D R + L + D + YH R G+ +
Sbjct: 140 KPELSSPDKGLVLVTDPRTAEMGWRLVLDNQVDPLDIITSCHKGDTEEYHRHRYAIGLPE 199
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---D 212
D P P ++ + + GIS +KGCYIGQE+ +R H ++RKR M + + D
Sbjct: 200 GVKDLPPGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKRLMPVCLSAPVQD 259
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
L + G VGK L++ R + V V+AS P W+
Sbjct: 260 LEEGAALQTQSGKPAGKHRAGVGKLGLSLVRTANAKEVLTLKSK-NDAVVTVQASVPDWW 318
>gi|281340181|gb|EFB15765.1| hypothetical protein PANDA_019539 [Ailuropoda melanoleuca]
Length = 317
Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53
+ L ++ ++V G ++PFL ++T ++ +A + L QG+ L
Sbjct: 9 ACFPLGERALVRVRGPDSVPFLLGLLTNELPLPASAAGAVSSPALAGYAHFLNVQGRTLY 68
Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------- 102
L+ ++ E F+LE DR+ +L L YK+R V +E +P V
Sbjct: 69 DVLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPE 128
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
+ + I R + R +E +A D++ YH R HG
Sbjct: 129 EGGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHG 188
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 189 VPEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGP 248
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
LP G S + G G LA+ R +K+ + + + + AS
Sbjct: 249 LPAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTS-ESGQLALTAS 307
Query: 268 FPHWY 272
P W+
Sbjct: 308 VPDWW 312
>gi|114769319|ref|ZP_01446945.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
gi|114550236|gb|EAU53117.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
Length = 253
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + N+S +KV G + FLQ +IT DV +A+L+P+GK L F I+
Sbjct: 1 MCPEIIKNRSILKVSGNDSENFLQGLITNDVSRAKT-ELIYTALLSPKGKYLFDFFIT-S 58
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D ++++I + I +L YKLR++V IE + S +F D R
Sbjct: 59 HSDGYLIDISSNNAYQFIQRLNLYKLRADVTIEQTD----IKVGRGIGPISEQAFQDPR- 113
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+D L +R + + S I + ++R+ + I + + + + +A + L+G+
Sbjct: 114 --SDQLGYRIYNPTQTEDSSIN-WDQIRVENCIPETGIELIIDETYILEANFEKLSGVDF 170
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV +R++H+ ++K + + P G+ I+++D +G + A+A
Sbjct: 171 RKGCYVGQEVTARMKHKVELKKGFVKVQIDGSAP-IGTDIISNDKVVGQIFTQSNGMAIA 229
Query: 241 IARIDKVDHAIKKGMA 256
R ++V + +K G A
Sbjct: 230 YLRFNRVSNDMKAGTA 245
>gi|320461691|ref|NP_001070103.2| putative transferase C1orf69 homolog, mitochondrial [Danio rerio]
gi|263405678|sp|B8JMH0|CAF17_DANRE RecName: Full=Putative transferase CAF17 homolog, mitochondrial;
AltName: Full=Iron-sulfur cluster assembly factor
homolog; Flags: Precursor
gi|220673097|emb|CAX13033.1| novel protein (zgc:153540) [Danio rerio]
Length = 354
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 29/299 (9%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISK 59
S L +++ + V G+ FLQ IIT D+ L A + +L QG+ L ++
Sbjct: 50 SCYRLPHRTVLNVSGQDTSSFLQGIITNDMNLLGEDSLNAMYAHVLNVQGRTLYDIILYS 109
Query: 60 IEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV---------LSWN 105
++ + +LE D + +DS++ L YK+R V + + P + +
Sbjct: 110 LKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSVCPSLSLWALLPHSKEAVLGR 169
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDP 156
+ T ++ + E+ +++ R + DI + YH R G+ +
Sbjct: 170 PDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSACRLGNTEEYHRHRYEIGLPEG 229
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--P 214
D P P +A + + GIS +KGCYIGQE+ +R H +IRKR M ++ +
Sbjct: 230 VGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHHTGVIRKRLMPVSLSAPAEKL 289
Query: 215 PSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
GS + G V K L++ R+ ++ + V V AS P W+
Sbjct: 290 NQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQLKSS-GDETVTVLASVPDWW 347
>gi|301787921|ref|XP_002929380.1| PREDICTED: putative transferase C1orf69, mitochondrial-like,
partial [Ailuropoda melanoleuca]
Length = 319
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53
+ L ++ ++V G ++PFL ++T ++ +A + L QG+ L
Sbjct: 11 ACFPLGERALVRVRGPDSVPFLLGLLTNELPLPASAAGAVSSPALAGYAHFLNVQGRTLY 70
Query: 54 YFLISKIEE----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------- 102
L+ ++ E F+LE DR+ +L L YK+R V +E +P V
Sbjct: 71 DVLLYRLPEHDEAPAFLLECDRAVLGALQRHLALYKIRRKVTVEPRPELRVWALLPRTPE 130
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
+ + I R + R +E +A D++ YH R HG
Sbjct: 131 EGGGAAPLREQAEGATILTRDPRTARMGWRLLTQDEGLALVPGGRLGDLRDYHRHRYQHG 190
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIGQE+ +R H +IRKR +
Sbjct: 191 VPEGIHDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHVGVIRKRLFPVQILGP 250
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
LP G S + G G LA+ R +K+ + + + + AS
Sbjct: 251 LPAGGITPGTSVLTESGQAAGKYRAGQGDVGLALLRSEKIKGPLHIRTS-ESGQLALTAS 309
Query: 268 FPHWY 272
P W+
Sbjct: 310 VPDWW 314
>gi|149915805|ref|ZP_01904330.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
gi|149810387|gb|EDM70232.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
Length = 244
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++ +++ G A FLQ ++T ++ L + + +A+LTPQGK + F ++ +T +L+
Sbjct: 3 RTILEITGSEAQDFLQGLVTNEMRKLDHGL-VYAAMLTPQGKYIADFFLA-GHGETILLD 60
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D S L+ +L YKLR++V I + + + D R L+
Sbjct: 61 VDESLSAQLMQRLSMYKLRADVTITQSELQ----VKRGTGPAPDGALADPRHPDLGWRLY 116
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
G D + +R+ H I + + + F +A + LNG+ KGCY+GQ
Sbjct: 117 GAEG-----GDDGTDWEAIRVAHCIPETGIEL-SADTFILEAGFERLNGVDFKKGCYVGQ 170
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + P G+ I + + GTL G K +A R D+
Sbjct: 171 EVTARMKHKTELRKGLATVEVHGTAP-VGTQITSSEKPAGTLFTQSGGKGIAYLRFDRAS 229
Query: 249 HAIKKGMA 256
++ A
Sbjct: 230 GQMQAESA 237
>gi|319408291|emb|CBI81944.1| aminomethyltransferase [Bartonella schoenbuchensis R1]
Length = 288
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 94/272 (34%), Positives = 147/272 (54%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK++ FLI KI+
Sbjct: 6 NTISLKNRKIIKVIGEKATRFLQALITTDVEKINSQELFPGALLSPQGKVIADFLIGKID 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFIDER 119
+ ++++I D+ +L+ YKL + V I V + W E + SFID+R
Sbjct: 66 Q-GYMIDIAAPLADTFQQRLILYKLHTKVEITQPLQLVVTVFWKTEISTCDFDLSFIDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G +A + ++ +RI + I + D+ +FPHD D ++G+
Sbjct: 125 FPKKEKMV-RVYGKIPFLAPEHNDNWNRMRIRYAIAESGQDYEIGKVFPHDINYDQISGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCYIGQEVVSR+ HR R+R +I+ G L P GS I +G LG V +A
Sbjct: 184 SFNKGCYIGQEVVSRMHHRRAARRRFLIVKGQHKLMP-GSTIQAGTKILGELGTCVENEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V + K + T+ + V +
Sbjct: 243 LALMRIDHVKDVMDKHIPFTIENLPVTINIAE 274
>gi|157110240|ref|XP_001651016.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti]
gi|157110242|ref|XP_001651017.1| hypothetical protein AaeL_AAEL005504 [Aedes aegypti]
gi|108878785|gb|EAT43010.1| conserved hypothetical protein [Aedes aegypti]
gi|108878786|gb|EAT43011.1| conserved hypothetical protein [Aedes aegypti]
Length = 341
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 42/304 (13%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEE- 62
L ++S + V G A+PFLQ +IT D+ L + + L G++L LI +++E
Sbjct: 36 SLESRSILGVRGSDAVPFLQGLITNDMNHLLRGSTSMYAMFLNTSGRVLYDSLIYRVDEK 95
Query: 63 --DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
F++E D S + L L +++R V I + V Q T S
Sbjct: 96 VGQHFLVECDTSVVEQLAKHLNLFRVRKKVEITKTDMKIWVAFTAQNSTHDQSPKIALKK 155
Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASDIKT-------------YHELRINHGI 153
F D R L +R ++ + +D+KT + + R + GI
Sbjct: 156 ADINGTLIFKDARLPE---LGYRLLTNSSTVLNDLKTHFSDEIDSPQNGSFVQHRYSLGI 212
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
+ + P FP + D L+G+S KGCYIGQE+ +R H +IRKR M +
Sbjct: 213 GEGVINLPPGKCFPLENNCDYLHGVSFHKGCYIGQELTARTYHTGVIRKRLMPLIFDQPV 272
Query: 213 ---LPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
L P + I + +G L L + RI+KV I + + + K
Sbjct: 273 DCGLLPEDAEIKTMEGQTVGKLRGYHKTFGLGLLRIEKV---ISSQLMIAGNTYHCKTFK 329
Query: 269 PHWY 272
P W+
Sbjct: 330 PDWW 333
>gi|99081825|ref|YP_613979.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
gi|99038105|gb|ABF64717.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
Length = 248
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 14/261 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +++ G FLQ +++ DV + + +AILTPQGK L F ++ + D
Sbjct: 1 MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGL-VYAAILTPQGKYLADFFLA-ADGDAV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + D L+ +L YKLR+NV +E + + D R
Sbjct: 59 LLDVAEALADDLVKRLKMYKLRANVTLEETDLKLR----RGTGDAPEGALPDPRHP---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G + D + +R+ H I + + P + + + LNG+ KGCY
Sbjct: 112 LGWRQYGK--ETFDDGSDWDVIRVTHVIPETGIELTPDSYL-LEVGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + +P G+ I +G + G KA+A R D
Sbjct: 169 VGQEVTARMKHKTELRKGLTQVEIDGTVP-VGAQITAGGKAVGQVFTQSGGKAIAYLRFD 227
Query: 246 KVDHAIKK-GMALTVHGVRVK 265
+ A++ G AL +
Sbjct: 228 RAKGALEAEGTALRWPEAPAE 248
>gi|225708392|gb|ACO10042.1| Hypothetical protein C21E11.07 in chromosome I [Osmerus mordax]
Length = 364
Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 29/298 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKI 60
L +++ + + G+ +LQ I+T D+ L P A + +L QG+ L ++ ++
Sbjct: 61 CYNLKHRTLLNIQGQDTRAYLQGIVTNDMELLKEPDHRAMYAHMLNVQGRTLFDIIMYRL 120
Query: 61 EEDT----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------- 108
++ +LE D + +DS++ L YKLR V I+ P V ++
Sbjct: 121 KDAEVGCSLLLECDSTVKDSILKHLKLYKLRRKVNIKPCPELTVWAVLPRDKVAGCQEIP 180
Query: 109 --TFSNSSFI---DERFSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPN 157
T + I D R + L N D + YH+ R G+ +
Sbjct: 181 NITPPEQALICEADPRNAEMGWRLVADSKVNPLDLILSCQLGDSEEYHKHRYAIGLPEGV 240
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PP 215
D P ++ + + GIS +KGCYIGQE+ +R H ++RK M + +
Sbjct: 241 KDLPLGVALPLESNLVYMQGISFSKGCYIGQELTARTHHTGVVRKPLMPVRLSAPAEGLE 300
Query: 216 SGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G+ + G +G+ L++ R+ + + V ++ S P W+
Sbjct: 301 EGAQLQTQSGKPAGKHRAGIGQLGLSLIRLAHAKEPLTFKL-FEDTAVTLEGSVPDWW 357
>gi|312380505|gb|EFR26480.1| hypothetical protein AND_07439 [Anopheles darlingi]
Length = 374
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 119/316 (37%), Gaps = 49/316 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S LS+++ ++V G+ ++ FLQ ++T D+ + A + L G++ L+ +
Sbjct: 55 SFEPLSDRALVRVHGEDSVSFLQGLMTNDMRHFEHSRAIYTMFLRVNGRVFCDALVYRHP 114
Query: 62 E----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--- 114
E D F+LE DR L L Y+LR V + + +++ + +
Sbjct: 115 EAKGNDDFLLECDRPAASRLEKHLKLYRLRKKVQVLLDETYHTWVAYRAQADPEAKALPV 174
Query: 115 -----------FIDERFSIADVL------------LHRTWGHNEKIASDIKTYHELRINH 151
F D R L R + + Y R
Sbjct: 175 DERKAHTDPHLFKDPRLPRLGYRVLMGSNGDQTEKLDRLLETFPGEIATVPRYVPFRYTL 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + + FP ++ D L+G+S KGCYIGQE+ +R H + RKR M +
Sbjct: 235 GVGEGELNLPDGKAFPLESNCDWLHGVSFHKGCYIGQELTARTYHTGVTRKRLMPLQFEG 294
Query: 212 DLPPSGSPI---------LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV--- 259
LP PI +G L + L + RI+KV + G LT+
Sbjct: 295 -LPLEDVPIDVLREADIKNQVGASVGKLRGYSAGQGLGLLRIEKV---LPAGGPLTLSVP 350
Query: 260 ---HGVRVKASFPHWY 272
H + P W+
Sbjct: 351 GITHSIVCHTIRPFWW 366
>gi|288958954|ref|YP_003449295.1| protein [Azospirillum sp. B510]
gi|288911262|dbj|BAI72751.1| protein [Azospirillum sp. B510]
Length = 308
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 31/302 (10%)
Query: 1 MSS--VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
MS+ L +S + V G+ FLQ +++ DVL + A + LTPQGK L F++
Sbjct: 1 MSAGYTVLDRRSVVAVTGEDRKAFLQGLVSNDVLRVTPDHAAYALFLTPQGKFLHDFMMV 60
Query: 59 KIEEDT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSWNQ 106
+ E+D +L+ + +R L+ +L YKLRS + +E + G + +
Sbjct: 61 ESEDDAGPALLLDPETDRRADLLRRLKMYKLRSKIALEDRAERLRVVIAFGEGALAALGL 120
Query: 107 EHTFSNS-------SFIDERFSIADVLLH----------RTWGHNEKIASDIKTYHELRI 149
+ +F D R L D Y LR+
Sbjct: 121 PAEPGAARPFAGGVAFTDPRLPGLGARLFLPVNGPVNGLAALEAAGLGGRDAAEYDRLRL 180
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ G+ D D +P P ++ MD LN IS KGCY+GQE+ +R ++R +I+K+ +T
Sbjct: 181 SLGVPDGTLDLIPEKSIPLESRMDALNAISWDKGCYMGQELTARTKYRALIKKKLFPVTF 240
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+P +G+P+ D E+G + ALA+ R++ V A G L + P
Sbjct: 241 DGPIPEAGTPVTLDGKEVGEIRSGRDAAALALLRLEDVQLAAANGSVLQAGSATLTPCDP 300
Query: 270 HW 271
W
Sbjct: 301 EW 302
>gi|126335964|ref|XP_001376859.1| PREDICTED: similar to chromosome 1 open reading frame 69
[Monodelphis domestica]
Length = 357
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 42/307 (13%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL----------PYKIARGSAILTPQGKILLY 54
L ++ ++V G FL ++T ++ A + L QG+ L
Sbjct: 49 PLRDRDALRVHGPDTESFLLGLVTNELPRPVPEGGATSEPAPAPAHYAHFLNVQGRTLYD 108
Query: 55 FLISKI----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
++ ++ EE F+LE+D S ++ + L YK+R V I P + Q
Sbjct: 109 VILYRLHEHQEEPHFLLEVDSSVSGAVQNHLKLYKIRRKVSISPCPDLSLWAVLPQTAAE 168
Query: 111 SNSSFIDER---------FSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152
+++ + E+ A + R H E +A ++ + YH+ R G
Sbjct: 169 ASAKPLLEKGGKPLVLTPDPRAACMGWRLIIHKEDLAQEVIPKTQIRHSQDYHKHRYQKG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + D P P ++ + +NG+S TKGCYIGQE+ +R QH +IRKR I +
Sbjct: 229 IPEGVRDLPPGVALPLESNLTFMNGVSFTKGCYIGQELTARTQHMGVIRKRLFPIRFSAP 288
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVK 265
LP G + + G G +A+ R +++ + T G V +
Sbjct: 289 LPEEGISAGANVLTEAGKAAGKYRAREGDLGIALLRTERIKGPLHIK---TSGGQCVSII 345
Query: 266 ASFPHWY 272
S P W+
Sbjct: 346 PSVPDWW 352
>gi|332252096|ref|XP_003275189.1| PREDICTED: putative transferase C1orf69, mitochondrial [Nomascus
leucogenys]
Length = 357
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 35/305 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP--------YKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL ++T ++ Y A + L QG+ L
Sbjct: 49 ACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPGPAAGGAPPYARAGYAHFLNVQGRTLY 108
Query: 54 YFLISKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ ++E + F+LE DRS + +L L Y++R V +E P V
Sbjct: 109 DVILYGLQEHSEEVSVFLLECDRSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSP 168
Query: 109 TFSNSSFIDE---------RFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHG 152
++ + E R + R +E A D+ YH+ R G
Sbjct: 169 EACGAASLQEKAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQG 228
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + D P P ++ + +NG+S TKGCYIG E+ +R H +IRKR + D
Sbjct: 229 VPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGHELTARTHHMGVIRKRLFPVRVLDP 288
Query: 213 LPPSG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
P SG + + +G G LA+ +K+ + + V + AS
Sbjct: 289 FPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQ-VALAAS 347
Query: 268 FPHWY 272
P W+
Sbjct: 348 VPDWW 352
>gi|110679047|ref|YP_682054.1| aminomethyl transferase family protein, putative [Roseobacter
denitrificans OCh 114]
gi|109455163|gb|ABG31368.1| aminomethyl transferase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 245
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I + D
Sbjct: 1 MTKRRILRLTGTDVSEFLQGLITNDIKGVETGL-VYAAMLTPQGKFLADFFICR-SGDAM 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ S D L+ +L YKLR++V IE + + D R
Sbjct: 59 LIDVAESHGDMLMQRLNMYKLRADVTIEATDL----HLHRGLGDPPEGAMADPRHP---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + D + LR+ H I + + P T F + + + G+ KGCY
Sbjct: 112 LGWRRYADAPQT-DDSTDWTALRVEHQIPEAGIELTPDT-FILEVGFERIAGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK ++ G+ I + G L G +ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSIAGP-AEPGAEITANGKPAGVLHSRAGDRALAYLRYD 228
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 229 RATGPMQAGAA 239
>gi|315498153|ref|YP_004086957.1| folate-binding protein ygfz [Asticcacaulis excentricus CB 48]
gi|315416165|gb|ADU12806.1| folate-binding protein YgfZ [Asticcacaulis excentricus CB 48]
Length = 269
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 27/277 (9%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSAILTPQGKILLY 54
+ + L +++ I + G FL + D+ + + A LTPQGK+
Sbjct: 3 NLIALPHRALIALSGPDWGKFLNGQTSIDLENIFDAVAAGENRHLYYGAFLTPQGKLSAD 62
Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
I + DT +++D RD L +L +KLR+ V + +P V S+++
Sbjct: 63 VFICPRDSDTVWIDVDAGVRDELFTRLNMFKLRAKVTLS-KPEAKVYASFSE-------G 114
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
D R L+R +G E + TY E R+ G+ +P DF ++P D MDL
Sbjct: 115 LPDPRAP----GLYRAYGTFEAMGG-FTTYTEFRLTQGVAEPGLDFPKDYLYPIDINMDL 169
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ I KGC++GQE SR++ R I+ R + ++ GS +L + G +
Sbjct: 170 IAAIDFKKGCFVGQETTSRMKRRGTIKNRLIPLSHNGTF-AFGSEVLLGERRAGEILASA 228
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
K+LA+ R+D++D LT G V + P W
Sbjct: 229 NGKSLALMRLDRLDGD------LTCAGDAVTLAVPDW 259
>gi|241111420|ref|XP_002399278.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492944|gb|EEC02585.1| conserved hypothetical protein [Ixodes scapularis]
Length = 356
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-------RGSAILTPQGKILLYF 55
L ++ I++ GK +PFLQ +IT D L + +L G++L F
Sbjct: 36 CEQLRSRKLIRLRGKDCLPFLQGMITNDTRHLSVDPQPSVSTSCMYAMMLNAAGRVLYDF 95
Query: 56 LISKIE---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------ 106
L+ K + +D +LE D R +++ YKLR +V +E V +++
Sbjct: 96 LLYKPDPRHDDEVLLECDADARSTVLKLFNLYKLRKDVRLEPCDELSVWAAFHPFCGTVD 155
Query: 107 -------EHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIKTYHE 146
T + + ++ R +L HR S +Y +
Sbjct: 156 EPLPAEIPITVAGDATVNVRDPRLYLLGHRVLLDSTQDLVASNPTFQAAPQDSSESSYTK 215
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR G+ + D + FP + D ++G+S KGCYIGQE+ +R H ++RKR M
Sbjct: 216 LRYQLGVSEGLGDLPTANCFPLEYNADYMSGVSFHKGCYIGQELTARTHHTGVVRKRIMP 275
Query: 207 ITGTDDLPPSG---SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
+ D + G ++ D D +G V G+ LA+ R+D+ A L+V
Sbjct: 276 VVLLDRVDGGGVASDTVVKDGNDKAVGKFRVHRGQVGLALLRVDEALSA----AELSVGS 331
Query: 262 VRVKASFPHWY 272
VR+ P W+
Sbjct: 332 VRLSTVKPGWW 342
>gi|328785953|ref|XP_001120590.2| PREDICTED: putative transferase C1orf69, mitochondrial-like [Apis
mellifera]
Length = 371
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 52/315 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKIEED- 63
L N+S ++V G + FLQ +IT D+ A + L +G+++ +I + +ED
Sbjct: 46 LKNKSLLRVRGNEVLIFLQGLITNDMKHFEEGAANLYALFLNTKGRVMYDVIIYRSQEDN 105
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------- 116
+ +E D +SL L Y++R + I+ + V ++ N+ I
Sbjct: 106 VYYIECDSQAAESLQKHLKMYRVRRKIDIDYLEDSVNVWAFFDPIQHMNNKHINNRQKLE 165
Query: 117 ------------------------DERFSIADVLL--------HRTWGHNEKIASDIKT- 143
D R S + + H+ H A D
Sbjct: 166 GLIFPCGTLNNKVSKIVDNIMIYEDPRLSDLGIRILAASEIERHKIIKHLNSNALDSANH 225
Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
Y R G+ + D P P + D L+G+S KGCYIGQE+ +R H ++R
Sbjct: 226 LSYKAFRYKLGVPEGIEDLPPGKPLPLEVNCDYLHGVSFHKGCYIGQELTARTYHTGVVR 285
Query: 202 KRPMIITGTDDLPPS---GSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
KR M + + S I+ + +G + + L + RI+ +A +L
Sbjct: 286 KRLMPLLFNEVPNKSFSYDEKIINETGNVVGKFRGIENQYGLGLMRINDSLNA----QSL 341
Query: 258 TVHGVRVKASFPHWY 272
T+ +++K S P W+
Sbjct: 342 TISNIKLKVSKPIWW 356
>gi|119383483|ref|YP_914539.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus
denitrificans PD1222]
gi|119373250|gb|ABL68843.1| glycine cleavage T protein (aminomethyl transferase) [Paracoccus
denitrificans PD1222]
Length = 238
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 17/249 (6%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + V G+ + FLQ ++T V +A+LTPQGK L FLI + + +++
Sbjct: 2 RRILAVSGEDRVEFLQGLVTNKV----GPEPCWAALLTPQGKYLADFLIVP-DGERLLVD 56
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D L+ +L YKLRS V +E + + +D R D L
Sbjct: 57 VDARLEGDLMRRLSMYKLRSKVALEPTDLTVA----RGTGPAPEGAIMDPRH---DALGW 109
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G D + +R+ H I + + +P+ F +A + L+G+ KGCY+GQ
Sbjct: 110 RLYG---GEGDDGSDWDAIRVAHCIPETLVELIPNETFILEAGFERLHGVDFRKGCYVGQ 166
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKV 247
EV +R++H+ +RK + + G + P G+PI + D E+GTL G +A+A R D++
Sbjct: 167 EVTARMKHKTELRKGLVTV-GIEGAAPVGTPILMADGREVGTLFTQSGDRAIAYMRFDRM 225
Query: 248 DHAIKKGMA 256
+ G A
Sbjct: 226 GEGLVAGDA 234
>gi|49475310|ref|YP_033351.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1]
gi|49238116|emb|CAF27323.1| hypothetical protein BH05150 [Bartonella henselae str. Houston-1]
Length = 285
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 102/272 (37%), Positives = 151/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ IKV G+ A FLQA+IT DV + + A+L+PQGK+L FLI K
Sbjct: 6 NAICLKNRKIIKVTGEEATHFLQALITTDVKKIGLQEIFPGALLSPQGKVLADFLIGKR- 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
ED + ++I S D L +LL YK+R+ V I V +SW E N SSFID+R
Sbjct: 65 EDGYFIDIFSSLSDLLYKRLLLYKMRTKVEIMQPLQEFVTVSWENETDSLNFYSSFIDKR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G +AS+ ++ LRI + I + + D+ +FPHD D +NG+
Sbjct: 125 FPAKEKII-RIYGETPFLASECHDNWNRLRIRYAIPESDKDYEIGKVFPHDINYDQINGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
+ KGCYIGQEVVSR+ HR R+R +++ +L P G+ I+ +G+LG +A
Sbjct: 184 AFNKGCYIGQEVVSRMHHRRAARRRILLVKSQHELIP-GANIVAGTKILGSLGTCAANEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID + A+ TV V V S
Sbjct: 243 LALMRIDHIKDAMDHNTPFTVKDVPVTISIAE 274
>gi|149203599|ref|ZP_01880568.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
gi|149142716|gb|EDM30758.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
Length = 248
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 14/249 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ GK A+ FLQ ++T D+ L + + +AILTPQGK L FL+S+ +D L+
Sbjct: 3 RRILEITGKDALQFLQGLVTNDLQKLDHGL-VYAAILTPQGKYLADFLLSR-HDDAIRLD 60
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D S L+ +L YKLR++V I+ + + +D R + L
Sbjct: 61 VDASLAPMLLQRLTMYKLRADVTIKETDLK----VRRGTGPAPLGALVDPRHAD---LGW 113
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+GQ
Sbjct: 114 RLYG--ETGGDDGSDFDRIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVGQ 170
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKALAIARIDKV 247
EV +R++H+ +RK ++ P GS I T + GTL G + +A R+D+
Sbjct: 171 EVTARMKHKTELRKGLTLVAVHGAAP-IGSEIFTPEGKAAGTLYTQSGGRGIAYLRLDRA 229
Query: 248 DHAIKKGMA 256
+ G A
Sbjct: 230 AAGMTSGEA 238
>gi|195054166|ref|XP_001993997.1| GH18001 [Drosophila grimshawi]
gi|193895867|gb|EDV94733.1| GH18001 [Drosophila grimshawi]
Length = 354
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 41/307 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLIS 58
+ L + I+V G PFLQ ++T DV L + S L G+++ +I
Sbjct: 37 TLEPLPQRELIRVHGAEVTPFLQGLVTQDVSRLQEPSGPASIYSLFLNRAGRLMFDTIIY 96
Query: 59 KIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ + DT+++E DR L Y++R I+I ++ + W Q+ T +
Sbjct: 97 RTNDKDTYLVECDRDASSDFRRHLRTYRVRK--HIDIDTVDDEYVPWVLFNDGQQKDTEA 154
Query: 112 NSS-----------FIDERFSIADVLL------------HRTWGHNEKIASD---IKTYH 145
+ D R + + W ++E IA + K Y
Sbjct: 155 RMASSKQKAKDLFIASDPRIGSLGIRILAPSDMSDAQLATTLWRNHEVIAVNPDIEKNYK 214
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR GI + + P FP +A D LNG+S KGCY+GQE+ +R+ H +IRKR M
Sbjct: 215 LLRYKQGIGEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYM 274
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
I T + + +G + +A+ RI+ V + L + G R
Sbjct: 275 PIRFTAPIRSDMTVKSVSGASLGRVLGHAQNHGVALLRIEPV---LNSAQQLVLDGDRCF 331
Query: 266 ASFPHWY 272
A PHW+
Sbjct: 332 AERPHWW 338
>gi|332026993|gb|EGI67089.1| Putative transferase C1orf69-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 370
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 72/322 (22%), Positives = 123/322 (38%), Gaps = 55/322 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKI 60
+ L ++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K
Sbjct: 38 TLERLIDRSILRVNGNEASFFLQGLITNDMKHLDEGAPSIYTLFLNIRGRVMCDAIVYKS 97
Query: 61 EE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI-- 116
EE + + +E D DSL L Y++R + IE + V +N N + +
Sbjct: 98 EESNLYYIECDSQIVDSLQRHLKMYRVRRKIDIEHVGDKINVWSMFNSTKYLDNGAAVNE 157
Query: 117 -------------------------------DERFSIADVLL-----------HRTWGHN 134
D R + + + +
Sbjct: 158 TEKFKLEGMIFPCGTFNSKTSKFVDNVMIYEDPRLPDLGLRILVESQISRNEIIKHLDAD 217
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ + Y R GI + D P P + D L+G+S KGCYIGQE+ +R
Sbjct: 218 IAPSESLGDYKAFRYKLGIGEGMHDLPPGKALPLEINCDYLHGVSFHKGCYIGQELTART 277
Query: 195 QHRNIIRKRPMIITGTD--DLPPSGSP--ILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250
H ++RKR M + + D P + + +G V K L + RI++ A
Sbjct: 278 YHTGVVRKRLMPLLFDNVIDKPFAYDEKILNESGNAVGKFRGCVAKYGLGLMRINESLSA 337
Query: 251 IKKGMALTVHGVRVKASFPHWY 272
+ L V G+ V+ P W+
Sbjct: 338 RE----LNVSGMNVRVVKPAWW 355
>gi|126733404|ref|ZP_01749151.1| aminomethyl transferase family protein [Roseobacter sp. CCS2]
gi|126716270|gb|EBA13134.1| aminomethyl transferase family protein [Roseobacter sp. CCS2]
Length = 244
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ ++ + + G + FLQ ++T DV +A+LTPQGK + F + ++D
Sbjct: 1 MPERTVLSISGDDRMSFLQGLVTNDVTK-ADGAIIYTALLTPQGKYIADFFVI-GQDDRL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ S +L +L Y+LR+ V IE + + +F D R D
Sbjct: 59 LIDVATSHAQTLGQRLTMYRLRAAVTIEQTDL----VVSRGTSPKPEGAFADPRH---DA 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ R +G + S+ + +R+ H I + T +A + LNG+ KGC+
Sbjct: 112 MGWRAYG--DTNISNDTDWDAVRVKHLIPQTGVELTDDTYV-LEAGFEALNGVDFKKGCF 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+V+R++H+ ++K +T P G I D GTL V G ALA R D
Sbjct: 169 VGQEIVARMKHKTTLKKGLAQVTIKGHAMP-GDAITADGKPAGTLYTVSGDNALAFLRFD 227
Query: 246 KVDHAIKKGMA 256
+ D ++ G A
Sbjct: 228 RADGLMQAGDA 238
>gi|146278057|ref|YP_001168216.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17025]
gi|145556298|gb|ABP70911.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17025]
Length = 255
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 12/260 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59
M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F I +
Sbjct: 1 MPGEIATDRRLWELTGKDGLHFLQGLVSNDVRPLERADGIVWAALLSPQGKYLADFFIVR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+E ++I ++ +L YKLR++V I + V + D R
Sbjct: 61 LEG-RLFIDISDRLAEATFRRLGMYKLRADVQIAPLDLPVV----RGLGEPPTGALPDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G I + +R+ H I + + +P + ++ + L+G+
Sbjct: 116 HPDLGWRGYGLTGDAPSI-----DWDAIRVAHVIPESGLELIPDDSYILESGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK + ++ + D P G+ I D +GTL G +A+
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVSISGDAP-FGAEITADGKPVGTLFTRSGDRAI 229
Query: 240 AIARIDKVDHAIKKGMALTV 259
A R D+ ++ G A+
Sbjct: 230 AFVRHDRAAGEMRAGEAVLA 249
>gi|296537311|ref|ZP_06899188.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957]
gi|296262361|gb|EFH09109.1| folate-binding protein YgfZ [Roseomonas cervicalis ATCC 49957]
Length = 362
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 11/275 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ ++V G+ + FLQ +++ DV A +A+LTPQGK L F I
Sbjct: 80 MPLSPLPDRAVLEVTGEDRLAFLQGLVSNDVTQAAPGRAVWAALLTPQGKWLADFFIV-A 138
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDER 119
D +L+ S+ +L +L ++LRS V I ++ V+ W + + D R
Sbjct: 139 GADRLLLDTAASQAGALAQRLSRFRLRSRVAIALREDLAVLAGWGESLPPEGVLAAPDPR 198
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
A R + I Y R++ G+ D D P +A D L GIS
Sbjct: 199 LPEAG---WRAILNASAIPPGDGDYARHRLSLGLPDGAPDLEPEKSVLLEAGFDELGGIS 255
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-GKKA 238
+KGCY+GQE+ +R ++R ++++R + + LP G+P+L D +G +
Sbjct: 256 WSKGCYMGQELTARTRYRGLLKRRLVPVAVEGPLPAPGTPVLRDGATVGEMRSGHPDGLG 315
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA+ R+ I++ L+ + P W +
Sbjct: 316 LALLRL-----PIREDAPLSCGAATLTPRLPGWMR 345
>gi|291241889|ref|XP_002740842.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 369
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 27/297 (9%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKI 60
L N++ I+V G+ A LQ +IT D L + + +L QG++L +I I
Sbjct: 50 KCAKLINRNIIRVSGRDASDLLQGLITNDASLLTRQNPSLYTMLLNQQGRVLYDAIIYGI 109
Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEH 108
+E +++E + L + +K+R V I E+ V +
Sbjct: 110 YKEGNDEAVYLVECENELAPELQKHMKMFKIRKKVDILNVSSEYEVWAAYEVFGKVDYPT 169
Query: 109 TFSNSS--FIDERFSIADVLL--HRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDF 160
+ N S D R S L + E I D+ YH R HGI + + D
Sbjct: 170 SMVNESICVADPRLSTFGRRLVVPKNTNLPELIPGLTEMDVHNYHTHRYIHGICEGSNDL 229
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPS 216
P ++ +D +NG+S KGCY+GQE+ +R H +IRKR M +T T D +
Sbjct: 230 PVGNALPLESNLDYMNGVSFHKGCYLGQELTARTHHTGVIRKRLMPVTLTNYENDAIING 289
Query: 217 GSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ + + G +G LA+ RI + A + + ++ S P W+
Sbjct: 290 NTTVSTKNGKNAGKFRNHIGIYGLALLRIAHTQGILTVPSA-DGNLITLEPSVPKWW 345
>gi|260428381|ref|ZP_05782360.1| glycine cleavage T protein [Citreicella sp. SE45]
gi|260422873|gb|EEX16124.1| glycine cleavage T protein [Citreicella sp. SE45]
Length = 244
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 14/249 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ ++V G FLQ ++T DV L + +A+LTPQGK F + ED +++
Sbjct: 5 RKVLRVSGPETEHFLQGLVTNDVALLKDGL-VYAALLTPQGKYRADFFLVPDGED-ILVD 62
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ + L L YKLR+ V I + ++ D R
Sbjct: 63 VAEGLYEGLAKALTMYKLRAKVTISETD----IAVARGPGPAPEGAYADPRDPRMG---- 114
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
W + + + LR+ + + + P T F +A + L+G+ KGCY+GQ
Sbjct: 115 --WRAYDGRPDESADWDALRVAACVPESGIELTPDT-FILEAGFERLHGVDFRKGCYVGQ 171
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + + P GS I + G L + +A R D+
Sbjct: 172 EVTARMKHKVELRKGLVTVEVNGAAP-VGSEITAGEKAAGVLYTQAEGRGIAHLRFDRAG 230
Query: 249 HAIKKGMAL 257
+ G A+
Sbjct: 231 DEMTAGDAV 239
>gi|84516026|ref|ZP_01003387.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
gi|84510468|gb|EAQ06924.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
Length = 243
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S++ + + G + FLQ ++T DV I +A+LTPQGK + F + ++D
Sbjct: 1 MSDRMVLSISGVDRVSFLQGLVTNDVTRAAQGI-IYAALLTPQGKFIADFFVL-GQDDRL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ +S +L+ +L Y+LR+ V I + + + + D R +
Sbjct: 59 LVDVAQSHGATLLQRLSMYRLRAAVQIGQTDL----VVSRGTGSTPPGALPDPRHA---G 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ R +G ++ SD + LR+ H I + + P T +A + L+G+ KGCY
Sbjct: 112 MGWRFYGDSDI--SDQTDWDALRVAHLIPETGIELTPETYV-LEAGFEALHGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+V+R++H+ +RK + D G PI D + G L + G A+A R D
Sbjct: 169 VGQEIVARMKHKTELRKGLARVR-IDGAAQPGDPITADGKDTGVLHTISGDHAIAYLRFD 227
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 228 RATGPMQAGSA 238
>gi|330925183|ref|XP_003300945.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1]
gi|311324671|gb|EFQ90954.1| hypothetical protein PTT_12329 [Pyrenophora teres f. teres 0-1]
Length = 428
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/318 (24%), Positives = 119/318 (37%), Gaps = 50/318 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62
+L ++ I + G A FLQ +IT +V SA L QG++L + E
Sbjct: 96 AHLPHRRLISLSGPDAAKFLQGLITNNVDP-NRPKPFYSAFLNAQGRVLWDVFVWVWPEL 154
Query: 63 ------DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFS--- 111
T +E+D + + L L +KLRS V IE + V +W
Sbjct: 155 LAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISEDEVCVWAAWGSAADAPVDA 214
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASD------IKTYHELRINHGIVDPNTDFLPSTI 165
N + +D R A + K + Y R +GI + +
Sbjct: 215 NDAMVDMRDPRAPNFHRYLAYADVKTLVPGTEPLGVTEYQVERYRYGIAEGPDEIPRENA 274
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPPS 216
P + +DL +GI KGCY+GQE+ R +H ++RKR + IT
Sbjct: 275 LPMEYNIDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITLQLHPLAEPVETIRVEP 334
Query: 217 GSPI---------LTDDIEIGTLGVVVGKKALAIARID-----KVDHAIKKGMA------ 256
GS I L G L VG LA+ R++ K+D ++
Sbjct: 335 GSEIKTIDDTHIGLKRGRARGKLIANVGDVGLALCRLEQMTSMKIDGSMHSAKPQMRFAC 394
Query: 257 LTVHG--VRVKASFPHWY 272
TV G V V+A W+
Sbjct: 395 YTVDGDVVEVQAVLHDWF 412
>gi|326429004|gb|EGD74574.1| hypothetical protein PTSG_05939 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 28/294 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++S ++V G FLQ ++T DV+ + K R S +L P+G++L+ + +I + F
Sbjct: 76 DSRSVLQVDGADGAEFLQGMLTNDVVEMEDKDVRFSMLLNPKGRVLVDAFVHRISPERFY 135
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSF--------I 116
L++ R S+ D ++LRS V ++ VV E++ +
Sbjct: 136 LDLPRPLIRSVADYFTRFRLRSQVEFRDVSDTVDSVVGMNVDENSLKQLTANFDVLNFQP 195
Query: 117 DERFSIADVLLHRTWG-----------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
D R + W ++ A D TY +LRI+ G + D P
Sbjct: 196 DPRIHQTEPYCRSLWRGVCTRPSTDSDSDDNAAHDEHTYQQLRISMGFGEGPVDHQPKKS 255
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI--LT 222
P +D L+G+S TKGCYIGQE+ +R H + RKR M IT GS +
Sbjct: 256 LPLQCNLDYLHGVSWTKGCYIGQELTARTHHMGMTRKRLMPITLHAPTTVAPGSKVINTE 315
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG----VRVKASFPHWY 272
+G + G ALA+ R++ A + V +P W+
Sbjct: 316 TGKAVGDVRSQAGVHALAMIRLEPAKGAQLAVVPQDGDEPGDMCPVSLHWPKWW 369
>gi|254463496|ref|ZP_05076912.1| glycine cleavage system T protein, aminomethyltransferase
[Rhodobacterales bacterium HTCC2083]
gi|206680085|gb|EDZ44572.1| glycine cleavage system T protein, aminomethyltransferase
[Rhodobacteraceae bacterium HTCC2083]
Length = 247
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 15/254 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++ + ++V G A FLQ ++T DV L + +A+LTPQGK + F + + D
Sbjct: 2 IHPETRRLLRVTGADARAFLQGLLTNDVQKLDQGL-VYTAMLTPQGKYIADFFLVP-DGD 59
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L+ D S+ D+L +L YKLR++V I + +F+D R +
Sbjct: 60 AILLDTDASQTDALAKRLTMYKLRADVTIADDKRS----VSRGLGPIPEGAFVDPRLAAL 115
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ + +IA D+ + L + H + + P + + + LNG+ KG
Sbjct: 116 GWRGY-----DGQIAQDV-DWTALNVTHSVPRAGIELTPDSFL-LEMGFERLNGVDFKKG 168
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALAIA 242
CY+GQEV +R++H+ +RK ++ T P G+ I T+ D GTL G KALA
Sbjct: 169 CYVGQEVTARMKHKTQLRKGLAQVSITGSAP-IGTDITTEADKVAGTLFSQSGDKALAYV 227
Query: 243 RIDKVDHAIKKGMA 256
R D+ +K A
Sbjct: 228 RFDRATGPLKAKDA 241
>gi|83854688|ref|ZP_00948218.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
gi|83842531|gb|EAP81698.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
Length = 256
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+
Sbjct: 10 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLS-ADGDSV 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + D+L+ +L YKLR++V I+ + + ++ D R +
Sbjct: 68 LLDVAEADADALVQRLTMYKLRADVTIDATEL----HLHRGLENSPDDAYSDPRDARMGW 123
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+R + LR+ + I + + S F + + LNG+ KGCY
Sbjct: 124 RAYRDTPQTDDTTDWD----ALRVTYMIPETGAELT-SDSFILEMGFERLNGVDFRKGCY 178
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + + G+ I D GT+ G ALA R D
Sbjct: 179 VGQEVTARMKHKTELRKGLAQVEISAPV-EPGTDITADGKPAGTIFTRTGTHALAYLRYD 237
Query: 246 KVDHAIKKGMA 256
+ A++ G A
Sbjct: 238 RAKAAMQAGDA 248
>gi|85707165|ref|ZP_01038252.1| aminomethyl transferase family protein [Roseovarius sp. 217]
gi|85668324|gb|EAQ23198.1| aminomethyl transferase family protein [Roseovarius sp. 217]
Length = 270
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 14/249 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ GK A+ FLQ ++T D+ L + +AILTPQGK L FL+S+ D L+
Sbjct: 25 RRILQITGKDALHFLQGLVTNDLNKLDQGL-VYAAILTPQGKYLADFLLSR-HGDAIRLD 82
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D S L+ +L YKLR++V + + + D R L
Sbjct: 83 VDDSLAPMLLQRLTLYKLRADVTLTQTDLK----VLRGTGPAPEGALTDPRHPD---LGW 135
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G E D + +R+ H I + + P T F +A + LNG+ KGCY+GQ
Sbjct: 136 RLYGDAE--GDDGSDFERIRVAHCIPETGIELTPDT-FILEAGFERLNGVDFRKGCYVGQ 192
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKV 247
EV +R++H+ +RK ++ P GS I + GTL G + +A R D+
Sbjct: 193 EVTARMKHKTELRKGLTMVAVHGTAP-IGSEIRTPEGKPAGTLYTQSGGRGIAYLRHDRA 251
Query: 248 DHAIKKGMA 256
+ G A
Sbjct: 252 AAGMIAGEA 260
>gi|307190794|gb|EFN74663.1| Putative transferase C1orf69, mitochondrial [Camponotus floridanus]
Length = 371
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 55/319 (17%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-RGSAILTPQGKILLYFLISKIEE- 62
L+++S ++V G A FLQ +IT D+ L + + L +G+++ ++ K EE
Sbjct: 41 RLNDRSILRVSGNEASTFLQGLITNDMKHLVEGTSNIYTLFLNIRGRVMYDAIVYKTEES 100
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID---- 117
+ + +E D +SL L Y++R V I+ I V ++ + N +D
Sbjct: 101 NMYYIECDLQVVESLQRHLQMYRIRRKVDIKHIGDKINVWSMFDSTKRYDNRPAVDENGK 160
Query: 118 -----------------------------ERFSIADVLL-----------HRTWGHNEKI 137
R + + + + +
Sbjct: 161 RQLEGMIFPCGTLNSKASKFIDNIMIYEDPRLPDLGLRILAESQIDKREITKHLDSDVFL 220
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ ++ Y R GI + D P P + D L+G+S KGCY+GQE+ +R H
Sbjct: 221 SENVANYKAFRYKLGIGEGVHDLPPGKALPLEINCDYLHGVSFHKGCYVGQELTARTYHT 280
Query: 198 NIIRKRPMIITGTD--DLPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
++RKR M + D P + + D D +G + K L + RI++ A +
Sbjct: 281 GVVRKRLMPLMFDSIVDKPLAYDEKILDESDNVVGKFRGYIDKYGLGLMRINESLSARR- 339
Query: 254 GMALTVHGVRVKASFPHWY 272
L V G+ +K P W+
Sbjct: 340 ---LNVLGINLKVVKPTWW 355
>gi|254487881|ref|ZP_05101086.1| glycine cleavage system T protein, aminomethyltransferase
[Roseobacter sp. GAI101]
gi|214044750|gb|EEB85388.1| glycine cleavage system T protein, aminomethyltransferase
[Roseobacter sp. GAI101]
Length = 247
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +K+ G + FLQ +IT D+ L +A+LTPQGK ++ F + E
Sbjct: 1 MNDRRILKLTGADTLDFLQGLITNDIRKLEQGP-IYAALLTPQGKFMVDFFLVAAGE-AV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ D+L+ +L Y+LR++V I + + + D R +
Sbjct: 59 LLDVAEPFADALVQRLNMYRLRADVQIAATELY----LHRSLGAAPDDGYSDPRDAQMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+R ++ D + LR+ H I + + P + F + + LNG+ KGCY
Sbjct: 115 RAYRDVPQSD----DTTDWDALRVAHSIPENGIELTPDS-FILEMGFERLNGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK I + + G+ I D GT+ G ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQINISAPV-SVGADITADGKPAGTVLTQSGTSALAYLRFD 228
Query: 246 KVDHAIKKGMA 256
+ A++ A
Sbjct: 229 RAKQAMQAEDA 239
>gi|83950541|ref|ZP_00959274.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
gi|83838440|gb|EAP77736.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
Length = 243
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 13/249 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ I + GK A FLQ ++T D+ L + +A+LTPQGK + F + E T L+
Sbjct: 3 RRIIDISGKDARSFLQGLVTNDLGKLDQGL-VYAALLTPQGKYMADFFLLARGE-TIHLD 60
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D S D L+ +L Y+LR++V + + + D R L
Sbjct: 61 ADASLGDMLMQRLAMYRLRADVQLS----ESALKLSRGTGPAPEGALADPRHP---ALGW 113
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G + D + +R+ H I + ++ P T +A + LNG+ KGCY+GQ
Sbjct: 114 RLYGAQD--GEDGSDFDAIRVAHCIPETGSELGPETYI-LEAGFERLNGVDFRKGCYVGQ 170
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + P G+ I + +GTL G +A+A R D+
Sbjct: 171 EVTARMKHKTELRKGFRTVEIEGAAP-LGTEITAEGKPVGTLHTQAGSQAIAYLRFDRAR 229
Query: 249 HAIKKGMAL 257
++ G A+
Sbjct: 230 GDMQAGDAI 238
>gi|83941198|ref|ZP_00953660.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
gi|83847018|gb|EAP84893.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
Length = 247
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ +++ G FLQ ++T D+ L + +AILTPQGK + F +S + D+
Sbjct: 1 MTSRRILRLSGPDTREFLQGLVTNDIRKLD-QAPIYAAILTPQGKFITDFFLS-ADGDSV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ + D+L+ +L YKLR++V I+ + + + ++ D R +
Sbjct: 59 LLDVAEADADALVQRLTMYKLRADVTIDATGL----HLHRGLESAPDDAYSDPRDARMGW 114
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+R + LR+ + I + + S F + + LNG+ KGCY
Sbjct: 115 RAYRDTPQTDDTTDWD----ALRVTYMIPETGAELT-SDSFILEMGFERLNGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + + + G+ I D GT+ G ALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQVEISAPV-EPGTDITADGKPAGTIFTRTGTHALAYLRYD 228
Query: 246 KVDHAIKKGMA 256
+ A++ G A
Sbjct: 229 RAKAAMQAGDA 239
>gi|297809523|ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297318482|gb|EFH48904.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/349 (19%), Positives = 124/349 (35%), Gaps = 81/349 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44
+ L ++S ++ G + FLQ ++T DV +A+
Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVSTPPMYAAL 91
Query: 45 LTPQGKILLYFLISKIEEDT---------------------FILEIDRSKRDSLIDKLLF 83
LTPQG+ L F + + ++D D L++ L
Sbjct: 92 LTPQGRFLYDFFLYSPSKSEEKLNRTGSGPGSDSGHDGSVELFADVDVDVLDELLETLKK 151
Query: 84 YKLRSNVIIEIQPINGVVLSWN---------------------QEHTFSNSSF-----ID 117
Y+LRS V IE + W E T S + + D
Sbjct: 152 YRLRSKVDIEN--VGEEFSCWQRYGRNLSGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209
Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
R + +D Y R+ HG+ + + + P +
Sbjct: 210 PRLECLGYRSIFPADATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILTD-- 223
LN IS KGCY+GQE+++R HR +IRKR + + D +G+ ++
Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKEVNQKIAAGAEVVESGT 329
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++GT+ +G + + + R+++ + + V+V+A P W+
Sbjct: 330 GKKMGTVSTALGSRGMGVMRVEEAFKPSAELTVKDLEDVKVEAIRPTWW 378
>gi|209964961|ref|YP_002297876.1| aminomethyltransferase, putative [Rhodospirillum centenum SW]
gi|209958427|gb|ACI99063.1| aminomethyltransferase, putative [Rhodospirillum centenum SW]
Length = 298
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + + V G + FLQ +++ DV + A +A+LT QGK L F I+ +
Sbjct: 8 AVPLPQRGVLAVGGPDRVSFLQGLVSNDVARVTEGRAVWAALLTAQGKYLHDFCIAALG- 66
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106
D +L+ + ++RD L+ +L Y+LR+ V +E + V +
Sbjct: 67 DALLLDCEAARRDDLLRRLRPYRLRAQVTLEDRTDTLAVSALVGTAAPAALELPAEPGAA 126
Query: 107 EHTFSNSSFIDERFSIADVLL--HRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161
++F+D R + + L R G + R+ GI D + D +
Sbjct: 127 RTVAGGTAFVDPRHAALGLRLILPREGGATALAGFRQGGEADWDSARLALGIPDGSRDLV 186
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
P + D L G++ KGC++GQE+ +R ++R +IRKR + + LP G+P+
Sbjct: 187 PEKSILLENGFDELQGVAWDKGCWMGQELTARTRYRGLIRKRLLPVEVCGPLPEPGTPVF 246
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ E G + G + LA+ R+++V+ A +G++ + P W
Sbjct: 247 LGEREAGEMRSGHGGQGLALLRLEEVERAAAEGLSFRAGEATLSPRRPSW 296
>gi|224124952|ref|XP_002329854.1| predicted protein [Populus trichocarpa]
gi|222871091|gb|EEF08222.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 84/354 (23%), Positives = 129/354 (36%), Gaps = 90/354 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT---LPYK---------------IARGSAILTP 47
L ++S I+ G I FLQ ++T DV LP +A LTP
Sbjct: 27 LKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGTTSYVPTPNLPSVYVPPMYAAFLTP 86
Query: 48 QGKILLYFLISK--IEED-----------------TFILEIDRSKRDSLIDKLLFYKLRS 88
QG+ L + + + E+ ++D S D L+ Y+LRS
Sbjct: 87 QGRFLYDLFLYRKPLGEEKLDGSGSGPGSDSGGDLELFADVDSSVLDELLLTFKRYRLRS 146
Query: 89 NVII-----------------------EIQPINGVVLSWNQEHTFSNSS----------F 115
V I E +P V S + SS F
Sbjct: 147 KVEIDNVAEDFSCWQRFGGNLAEKSKGEEEPEAASVGSGPGVDHSAMSSSHGNDVGWQWF 206
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + + K Y RI +GI + +T+ P +
Sbjct: 207 KDPRVDCLGLRGVFPSKETPPLVESDKETNELNYLLWRIENGIAEGSTEIPIGEAIPLEY 266
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPI--L 221
++ LN IS KGCY+GQE ++R HR +IRKR + + DD GS +
Sbjct: 267 NLEGLNAISFDKGCYVGQEFIARTHHRGVIRKRLLSLAFLDDSGKEVEQKVGPGSEVINT 326
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
+IG + +G + L + R+ A K +LT+ G ++V+A P W+
Sbjct: 327 ASGKKIGYVTTALGCRGLGVLRL---KEAFKGSGSLTIQGQEDIKVEAIRPKWW 377
>gi|255261983|ref|ZP_05341325.1| glycine cleavage T protein [Thalassiobium sp. R2A62]
gi|255104318|gb|EET46992.1| glycine cleavage T protein [Thalassiobium sp. R2A62]
Length = 241
Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ G A PFLQ+++T D+ + +A+LTPQGK +L F + +D ++
Sbjct: 2 RKVLELTGSDATPFLQSLVTNDINK---RGLVYTALLTPQGKFMLDFFVLN-HDDALWID 57
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ L +L Y+LR++V+I I ++ D R +
Sbjct: 58 VAADHAAGLAQRLTMYRLRADVMIAELDIT----VSRGTGDAPIGAYPDPRSP---AMGW 110
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G + + +D + LR+ + + + P + + + LNG+ KGCY+GQ
Sbjct: 111 RDYGEAQDMPTD---WDALRVAQMVPQLDAELGPDSYI-LEMGFERLNGVDFKKGCYVGQ 166
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
E+V+R++H+ +RK ++ ++ L G+ I ++ +GT+ V G ALA R D+ +
Sbjct: 167 EIVARMKHKTELRKGLARVSSSEPLSE-GAEITSNGKPVGTVHTVSGTSALAYLRFDRAN 225
Query: 249 HAIKKGMALTVHGVRV 264
I G+ +T+ V
Sbjct: 226 EMISDGINVTLEERSV 241
>gi|126462652|ref|YP_001043766.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17029]
gi|126104316|gb|ABN76994.1| glycine cleavage T protein (aminomethyl transferase) [Rhodobacter
sphaeroides ATCC 17029]
Length = 255
Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59
M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
++I D + +L Y+LR++V I ++ V + D R
Sbjct: 61 TGG-RLFIDISDRLADPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G ++ + +R+ H I + + +P + ++ + L+G+
Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ + ++ G A
Sbjct: 230 AYVRHDRAEGEMRAGEA 246
>gi|79470337|ref|NP_192950.2| aminomethyltransferase [Arabidopsis thaliana]
gi|22655070|gb|AAM98126.1| putative protein [Arabidopsis thaliana]
gi|30725630|gb|AAP37837.1| At4g12130 [Arabidopsis thaliana]
gi|332657699|gb|AEE83099.1| glycine cleavage T-protein family protein [Arabidopsis thaliana]
Length = 393
Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 69/349 (19%), Positives = 123/349 (35%), Gaps = 81/349 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAI 44
+ L ++S ++ G + FLQ ++T DV +A+
Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYAAL 91
Query: 45 LTPQGKILLYFLIS---------------------KIEEDTFILEIDRSKRDSLIDKLLF 83
LTPQG+ L F + + ++D D L++ L
Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151
Query: 84 YKLRSNVIIEIQPINGVVLSWN---------------------QEHTFSNSSF-----ID 117
Y+LRS V IE + W E T S + + D
Sbjct: 152 YRLRSKVDIEN--VAEEFSCWQRYGRNLTGSSSVGWGGGVDRAGESTASGNKYGWQWYKD 209
Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
R + +D Y R+ HG+ + + + P +
Sbjct: 210 PRLECLGYRSIFPSDATPPLVEADKETDESNYLLWRLEHGVAEGSAEIPKGEAIPLEYNF 269
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILTD-- 223
LN IS KGCY+GQE+++R HR +IRKR + + D +G+ ++
Sbjct: 270 VGLNAISFDKGCYVGQELIARTHHRGVIRKRLIPLRFIDSNGKELNQKIAAGAEVVESGT 329
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++GT+ +G + + + R+++ + V+V+A P W+
Sbjct: 330 GKKMGTVSTALGSRGMGVMRVEEAFKPSAELAVKDSEEVKVEAIKPTWW 378
>gi|170740023|ref|YP_001768678.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46]
gi|168194297|gb|ACA16244.1| folate-binding protein YgfZ [Methylobacterium sp. 4-46]
Length = 277
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ ++T +V TLP AR A+LTPQGK+L+ FLIS+
Sbjct: 1 MPIALLPDRAVLSVAGDDAPGFLQGLVTCNVETLPPGEARLGALLTPQGKVLIDFLISRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E F L++ R+ L +L Y+LR+ V P+ V+ W + + D R
Sbjct: 61 AE-GFALDVARALLPDLTRRLTLYRLRAKVAFAEAPLR-VLAVWGG--PPAGAWLRDGRL 116
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
H G + + Y RI G+ + DF FPH+ALMD L G+
Sbjct: 117 PALGWRRHAGEGEGPAPDATAEDYAAHRIGLGVPEGGADFALGDAFPHEALMDQLGGVDF 176
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEVVSR+QHR R R + + G+ + +G G G + L
Sbjct: 177 RKGCYVGQEVVSRMQHRGTARTRVVPVAYAGARAAAPGTAVTAGARALGQTGGAAGARGL 236
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ R+D++ A+ G A+ G+ ++ P
Sbjct: 237 ALLRLDRLADAVAAGEAIEAGGLALRVERPA 267
>gi|221639671|ref|YP_002525933.1| glycine cleavage T protein [Rhodobacter sphaeroides KD131]
gi|221160452|gb|ACM01432.1| Glycine cleavage T protein [Rhodobacter sphaeroides KD131]
Length = 255
Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59
M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + +
Sbjct: 1 MPGEIATDRKLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
++I + + +L Y+LR++V I ++ V + D R
Sbjct: 61 TGG-RLFIDISDRLAEPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G ++ + +R+ H I + + +P + ++ + L+G+
Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ + ++ G A
Sbjct: 230 AYVRHDRAEGEMRAGEA 246
>gi|126732783|ref|ZP_01748578.1| aminomethyl transferase family protein [Sagittula stellata E-37]
gi|126706779|gb|EBA05850.1| aminomethyl transferase family protein [Sagittula stellata E-37]
Length = 245
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 14/248 (5%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+++ ++V G A FLQ ++T DV L + +A+LTPQGK F + ED ++
Sbjct: 5 SRTVLRVHGAKAREFLQGLVTNDVARLEKGL-VYAALLTPQGKYRADFFLVPDGED-VLI 62
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
+++ + SL+ L YKLR+ V I V+ T +F D R
Sbjct: 63 DVEVALAVSLMQALTMYKLRTPVEITETD----VVVTRGTGTPPEGAFADPRDPRLGWRG 118
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+ E + LR+ + + P T F +A + LNG+ KGCY+G
Sbjct: 119 YAGQPAGE------ADWDALRVAACVPRAGVELTPDT-FILEAGFERLNGVDFKKGCYVG 171
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
QEV +R++H+ +RK + P G+ I+++ E GTL G A+A R D+
Sbjct: 172 QEVTARMKHKTELRKGLARVAIDGHAP-IGTKIVSNGKEAGTLFTQSGDSAIAYLRFDRA 230
Query: 248 DHAIKKGM 255
+ G
Sbjct: 231 GDDMMAGD 238
>gi|322826129|gb|EFZ30885.1| hypothetical protein TCSYLVIO_2815 [Trypanosoma cruzi]
Length = 317
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 32/302 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60
LS++S I+V G +A FLQ + T D+ L + L G+++ + +
Sbjct: 5 CLLSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEH 108
+ ++++ R D+L D LL ++R + I+ VV++ + +E
Sbjct: 65 HGGDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVATSSYGNGGIYEEEEK 124
Query: 109 TFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
T SS F+D R LH++ + + Y GI + F
Sbjct: 125 TPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPDVFK 184
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDD 212
P+ FP + D L G+S KGCY+GQE+ R + RKR + + G
Sbjct: 185 PARSFPFECNTDFLRGVSFQKGCYLGQELTHRTHVMLVTRKRTVPLRFPSFQEETGGERR 244
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHW 271
G +L D ++G L V G L + R+ VD A + L + V V + P W
Sbjct: 245 SVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIPGW 304
Query: 272 YK 273
++
Sbjct: 305 WE 306
>gi|83945377|ref|ZP_00957725.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis
alexandrii HTCC2633]
gi|83851211|gb|EAP89068.1| Glycine cleavage T protein (aminomethyl transferase) [Oceanicaulis
alexandrii HTCC2633]
Length = 298
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 9/268 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L +++ I + G A FLQ ++T + A SA+LTPQGK+L I E
Sbjct: 29 LTTLPDRAVIAITGAEARGFLQRVLTQGPEGVKPGAAMFSALLTPQGKVLADLFILDDGE 88
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----FSNSSFIDE 118
+ ++ S+ D+L+ + Y++R++ IE + V+ + + + S+ D
Sbjct: 89 GGLLFDVPASEADALLKRFTLYRMRADATIERREDLSVIAAAGEPAEELRMVALSAAPDP 148
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R + + R SD Y RI G + +D+ P+ +F D DLL+GI
Sbjct: 149 RNA---AIGWRGVAPAGGPDSDRDLYERARIQAGAPELGSDYGPAEVFSTDVNHDLLSGI 205
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
+ KGC++GQEV SR+ + +RKR + + G + + + +G + V G A
Sbjct: 206 NYKKGCFVGQEVASRMHRKGGVRKRSVRLQGDG--LKTQDEVKVGETVLGPVSSVSGDHA 263
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKA 266
LA RID++ ++ G L V+G V
Sbjct: 264 LARLRIDRLKDGLQAGDTLKVNGAPVTL 291
>gi|260575028|ref|ZP_05843029.1| folate-binding protein YgfZ [Rhodobacter sp. SW2]
gi|259022650|gb|EEW25945.1| folate-binding protein YgfZ [Rhodobacter sp. SW2]
Length = 251
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-GSAILTPQGKILLYFLISK 59
M + + + V GK A+ FLQ +++ D+ L +A+L+PQGK L F +
Sbjct: 1 MQGEAATGRRLVAVAGKDALEFLQGLVSNDLRPLAKGPGIVWTALLSPQGKYLADFFVV- 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ + +L++ ++ + +L Y+LR++V I P++ + D R
Sbjct: 60 AQPEGLLLDLPEVLAEATLRRLAMYRLRADVQIAESPLS----VSRGLGLAPADALPDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G I + +R+ H I + + +P + +A + L+G+
Sbjct: 116 DPALGWRRYGAPGGPAVI-----DWDAIRVAHCIPESGIELIPDDSYILEAGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK +++ D + P G+ IL D G + G + +
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVLVR-VDGVVPIGAEILADGKPAGQVFTQSGGQGI 229
Query: 240 AIARIDKVDHAIKKGM 255
A R D+ + G
Sbjct: 230 AFLRFDRASGEMLAGD 245
>gi|255537089|ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549510|gb|EEF50998.1| aminomethyltransferase, putative [Ricinus communis]
Length = 391
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 71/355 (20%), Positives = 123/355 (34%), Gaps = 84/355 (23%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSA 43
S+ L+++S I+ G + FLQ ++T D+ + +A
Sbjct: 22 STSLLNSRSVIRFSGPDTVKFLQGLLTNDIRRFDETPSEATSFLPTPNLATVSVPPMYAA 81
Query: 44 ILTPQGKILLYFLISKI-------------------EEDTFILEIDRSKRDSLIDKLLFY 84
+LTPQG+ L + + + ++D S D L+ Y
Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPGSDSNGSVELLADVDTSVLDELLHTFQRY 141
Query: 85 KLRSNVIIE----------------------IQPINGVVLSWN-----------QEHTFS 111
+LRS V IE + W Q
Sbjct: 142 RLRSKVEIENVAGEFSCWQRFGGNLTETSKVADEPEAASVGWGSGVDRAARSSTQGDGHG 201
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIF 166
F D R + ++ K Y RI +G+ + +T+
Sbjct: 202 WQWFKDPRLDCLGFRGIFPSNQTPPLVEADKETNEKNYQLWRIENGVAEGSTEIPKGEAI 261
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSP 219
P + + LN IS KGCY+GQE+V+R HR +IRKR + + DD GS
Sbjct: 262 PLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDNGTEVEEKVAPGSE 321
Query: 220 I--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ T ++G + +G + L + R+++ + ++V+ P W+
Sbjct: 322 VIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQDDLKVETIRPKWW 376
>gi|332558691|ref|ZP_08413013.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N]
gi|332276403|gb|EGJ21718.1| Glycine cleavage T protein [Rhodobacter sphaeroides WS8N]
Length = 255
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59
M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
++I + + +L Y+LR++V I ++ V + D R
Sbjct: 61 TGG-RLFIDISDRLAEPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALRDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G ++ + +R+ H I + + +P + ++ + L+G+
Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ + ++ G A
Sbjct: 230 AYVRHDRAEGEMRAGEA 246
>gi|46125843|ref|XP_387475.1| hypothetical protein FG07299.1 [Gibberella zeae PH-1]
Length = 396
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 76/340 (22%), Positives = 126/340 (37%), Gaps = 70/340 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISKI 60
L+++ I V G + FLQ IITA+V T LP A LT G++L +
Sbjct: 45 AALTSRRLISVTGPDSAKFLQGIITANVTTKDGLPRTDGFYGAFLTATGRVLYDVFVYPN 104
Query: 61 --------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHT- 109
EE +++E+D +L + YKLR+ + + + + V +W+ +
Sbjct: 105 HNSPGFSSEEPAYLIEVDAGHAPTLAKHIKRYKLRAKLTVRLLGEDEASVWHAWDDSNGA 164
Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTD 159
+N S D R L + + ++ + + Y R +GI + +
Sbjct: 165 NWDSIVKLTNLSLQDPRAPGLGYRLLQLDQNTPQVDLEKTTEEAYTIRRYINGIAEGQDE 224
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPS- 216
P + MD++NGI KGCY+GQE+ R +HR ++RKR + I T+ PP+
Sbjct: 225 ISKEHALPQETNMDIMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYETEHAPPTT 284
Query: 217 ---GSPILTD----------------------DIEIGTLGVVVGKKALAIARI------- 244
+ + G VG L + R+
Sbjct: 285 LQYHADVAASSLESVSADMIPRDTSIGRFEKRGRSAGKWLKGVGNIGLGLCRLENMTDVT 344
Query: 245 ---DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273
D A + V+VKA P W +
Sbjct: 345 LPGDAASGAFNPEDEFVLDWGEEENRNRVKVKAFVPDWLR 384
>gi|189199100|ref|XP_001935887.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982986|gb|EDU48474.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 428
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 115/289 (39%), Gaps = 39/289 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62
L ++ I + G A FLQ +IT +V L +A L QG++L + E
Sbjct: 96 APLPHRRLISLSGPDAAKFLQGLITNNVD-LNQPKPFYAAFLNAQGRVLWDVFVWVWPEL 154
Query: 63 ------DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTF---S 111
T +E+D + + L L +KLRS V IE V +W +
Sbjct: 155 LAEEKQWTCYIEVDEREAEELKKHLKRHKLRSKVEIEDISGDEVCVWAAWGSAADARVNA 214
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPST 164
N + +D + A HR + + A + Y R +GI + +
Sbjct: 215 NDTMVDMQDPRAPNF-HRYLAYADVKALVPGTEPLSVTEYQIERYRYGIAEGPDEIPRED 273
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPP 215
P + DL +GI KGCY+GQE+ R +H ++RKR + IT +
Sbjct: 274 ALPMEYNFDLWHGIDFKKGCYVGQELTIRTKHTGVVRKRVLPITLQLHPLAEPVEKIIVE 333
Query: 216 SGSPI-LTDDIEI--------GTLGVVVGKKALAIARIDKVDHAIKKGM 255
SGS I DD +I G VG LA+ R++++ + G
Sbjct: 334 SGSEIKTIDDTQIGLKRGRARGKFIANVGDVGLALCRLEQMTSMVIDGS 382
>gi|77463816|ref|YP_353320.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides
2.4.1]
gi|77388234|gb|ABA79419.1| aminomethyltransferase related to GcvT [Rhodobacter sphaeroides
2.4.1]
Length = 255
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISK 59
M +++ ++ GK + FLQ +++ DV L +A+L+PQGK L F + +
Sbjct: 1 MPGEIATDRRLWEISGKDGLHFLQGLVSNDVRPLETADGIVWAALLSPQGKYLADFFVVR 60
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
++I D + +L Y+LR++V I ++ V + D R
Sbjct: 61 TGG-RLFIDISDRLADPTLKRLTMYRLRADVQIAPLDLSVV----RGLGEAPAGALPDPR 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ G ++ + +R+ H I + + +P + ++ + L+G+
Sbjct: 116 HPALGWRGYGMDGGAPEV-----DWDAIRVAHLIPESGLELVPDDSYLLESGFERLHGVD 170
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV +R++H+ +RK + + + + G+ I D GTL G +A+
Sbjct: 171 FRKGCYVGQEVTARMKHKTELRKGLVRVRISGE-AAFGAEITADGKPAGTLFTRSGDRAI 229
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ + ++ G A
Sbjct: 230 AHVRHDRAEGEMRAGEA 246
>gi|126725874|ref|ZP_01741716.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150]
gi|126705078|gb|EBA04169.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2150]
Length = 247
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ V G + FLQ+++T DV + +A+LTPQGK L F + + D ++
Sbjct: 4 SRQVFAVGGADRVKFLQSLVTNDVEKAKDGL-VYTALLTPQGKYLFDFFMV-AQGDRILI 61
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
+ D + +L +L+ YKLR++V IE + + D R +
Sbjct: 62 DCDGEQAAALSGRLMMYKLRADVTIEPLDLY----VHRGNDLLPVDGYADPRHAALGWRA 117
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+R E+ A + + L I + + + + + + + + LNGI KGCY+G
Sbjct: 118 YR-----EQPAQETPDWTALNIANLVPETGAELVSGEGYILEMNFEALNGIDFRKGCYVG 172
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
QE+++R++H+ +RK +T + G I + IG L G +ALA R D++
Sbjct: 173 QEIMARMKHKTELRKGLARVTVDGET-SFGDEITSGGKVIGKLLTRAGDQALAYLRFDRI 231
Query: 248 DHAIK 252
I+
Sbjct: 232 KADIQ 236
>gi|295670505|ref|XP_002795800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226284885|gb|EEH40451.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 1460
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/352 (21%), Positives = 131/352 (37%), Gaps = 83/352 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58
L +++ I V G+ + FLQ +IT ++LT K +A L G++L I
Sbjct: 1034 YAQLPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIPKTGFYAAFLNAPGRVLNDVFIY 1093
Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQE 107
+ + +++E+D+++ +L+ L +KLRS + + + WN+E
Sbjct: 1094 PVPPNDSFNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEE 1153
Query: 108 HTF--------------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYH 145
+ D R L + E++ D TY+
Sbjct: 1154 DADLLTEYDFELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYN 1211
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
RI HGI + + + + P + MD++ I KGCY+GQE+ R HR ++RKR +
Sbjct: 1212 LRRILHGIPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRIL 1271
Query: 206 IITGTD-------------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIA 242
+ D LPP+G+ I G VG LA+
Sbjct: 1272 PVRFYDINEPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALC 1331
Query: 243 RIDKVD---------------------HAIKKGMALTVHGVRVKASFPHWYK 273
R++ + A +G ++VKA P W +
Sbjct: 1332 RLEMMTDISFTEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 1383
>gi|225426884|ref|XP_002262786.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 407
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 90/354 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47
L ++S ++ G + FLQ ++T DV + +LTP
Sbjct: 42 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 101
Query: 48 QGKILLYFLISKIEEDT-------------------FILEIDRSKRDSLIDKLLFYKLRS 88
QG+ L + + + + ++D + D L+++ Y+LR+
Sbjct: 102 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPGGRLELLADVDATVLDELLERFNKYRLRA 161
Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115
+V+IE + + W + +S F
Sbjct: 162 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGGAVDPAGTSSSHVNSHGWQWF 221
Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + +D K Y R+ G+ + +T+ L P +
Sbjct: 222 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 281
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222
+ LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++
Sbjct: 282 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSEVINA 341
Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
+ GT+ + + L + R++ A+K LT+ G V+V+A P W+
Sbjct: 342 VSGKKAGTVTTALECRGLGLLRLE---EALKGPSKLTIQGQEDVKVEAIRPEWW 392
>gi|163867998|ref|YP_001609202.1| aminomethyltransferase [Bartonella tribocorum CIP 105476]
gi|161017649|emb|CAK01207.1| aminomethyltransferase [Bartonella tribocorum CIP 105476]
Length = 290
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 104/272 (38%), Positives = 151/272 (55%), Gaps = 6/272 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ L N+ I++ G+ A FLQ++IT DV + + A+L+PQGK+L FLI K
Sbjct: 6 NAICLKNRGIIQITGEEATDFLQSLITTDVKKISPQELFPGALLSPQGKVLADFLIGKR- 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDER 119
ED + ++I+ S D+L +LL YKLR V I V +SW E N S+F+D+R
Sbjct: 65 EDGYFIDIEISLADTLYKRLLLYKLRKKVEITQPLQELVTVSWKNESDTLNFDSNFVDKR 124
Query: 120 FSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
F + ++ R +G +AS D T+++LRI + I + D+ IFPHD D +NG+
Sbjct: 125 FPEQEKII-RIYGKIPFLASEDYDTWNQLRIRYAIAESGQDYEVGKIFPHDINYDQINGL 183
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCYIGQE+VSR+ HR R+R +II DL P S I +G LG V +A
Sbjct: 184 SFNKGCYIGQEIVSRMHHRRAARRRILIIKSQCDLSPQ-SSIEAGTKVLGHLGTCVTNEA 242
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ RID V A+ + TV + V
Sbjct: 243 LALMRIDHVKDAMDHNIPFTVKNIPVTIHIAE 274
>gi|225684495|gb|EEH22779.1| glycine cleavage T-protein [Paracoccidioides brasiliensis Pb03]
Length = 438
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 75/352 (21%), Positives = 131/352 (37%), Gaps = 83/352 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58
L +++ I V G+ + FLQ +IT ++LT K +A L G++L I
Sbjct: 47 YAQLPSRALIAVTGRDSTTFLQGLITQNLLTSQNTPIPKTGFYAAFLNAPGRVLNDVFIY 106
Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQE 107
+ + +++E+D+++ +L+ L +KLRS + + + WN+E
Sbjct: 107 PVPPNDSYNGTPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEE 166
Query: 108 HTF--------------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYH 145
+ D R L + E++ D TY+
Sbjct: 167 DADLLTEYDIELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYN 224
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
RI HG+ + + + + P + MD++ I KGCY+GQE+ R HR ++RKR +
Sbjct: 225 LRRILHGVPEGQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRIL 284
Query: 206 IITGTD-------------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIA 242
+ D LPP+G+ I G VG LA+
Sbjct: 285 PVRFYDINDPMPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALC 344
Query: 243 RIDKVD---------------------HAIKKGMALTVHGVRVKASFPHWYK 273
R++ + A +G ++VKA P W +
Sbjct: 345 RLEMMTDISFTEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 396
>gi|152013705|gb|ABS19968.1| glycine cleavage T protein [Artemia franciscana]
Length = 231
Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
N+ ++V G + PFLQ +IT D+ L + + + L QG++L ++ + ++
Sbjct: 32 PNRGLVRVSGVDSAPFLQGLITNDINHLEKQPSMYTMFLNRQGRVLFDVVVFRENNHDYL 91
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIADV 125
L+ D +SL+ + ++LR IE+ P++ + + + F F D R +
Sbjct: 92 LDCDSRCINSLVKHMKMFRLREK--IEVNPVDNLAIVVTSDLNFFRGLFWHDPRTEMLGT 149
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
EK+ S Y R GI + D P FP ++ D L+G+S TKGCY
Sbjct: 150 RAVIDANLVEKLVSKTTFYSLQRFELGIPEGIEDLPPGECFPLESNCDYLHGVSFTKGCY 209
Query: 186 IGQEVVSRIQHRNIIRKRPMII 207
IGQE+ +R H + RKR M +
Sbjct: 210 IGQELTARTYHTGVTRKRLMPL 231
>gi|194903760|ref|XP_001980933.1| GG11944 [Drosophila erecta]
gi|190652636|gb|EDV49891.1| GG11944 [Drosophila erecta]
Length = 348
Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G+ +PFLQ + T DV + + + L G++L ++
Sbjct: 39 TLEPLGNRELIRVHGQEVVPFLQGLATNDVARIRSPGGPASMYAHFLNKAGRLLYDTIMY 98
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ +T ++E DR L Y++R IE+ ++ +W +
Sbjct: 99 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVP 156
Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEK---------IASDIKTYHELRINHGI 153
N +D R + + W K AS Y LR G+
Sbjct: 157 NPHPDLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGV 216
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211
+ ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T
Sbjct: 217 GEGCSELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
DL S ++G + K +A+ RI+KV + L + G R P W
Sbjct: 277 DLGSSQDVTSVAGAKLGRVFGSAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEW 333
Query: 272 Y 272
+
Sbjct: 334 W 334
>gi|195499172|ref|XP_002096836.1| GE25894 [Drosophila yakuba]
gi|194182937|gb|EDW96548.1| GE25894 [Drosophila yakuba]
Length = 348
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ + T DV + + + L G++L ++
Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILY 98
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ +T ++E DR L Y++R IE+ ++ +W +
Sbjct: 99 RTNNPETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTWVMFNLKDASEAVP 156
Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEK---------IASDIKTYHELRINHGI 153
N +D R + + W K AS Y LR G+
Sbjct: 157 NPHPDLFVSLDPRLPVLGTRILAPTDMDWAKLSKCFVDFGTATPASPDNNYQLLRYKQGV 216
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211
+ ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T
Sbjct: 217 GEGCSELPPGKCFPLEANADYLHGVSFQKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
DL + ++G + K +A+ RI+KV + L + G R P W
Sbjct: 277 DLGSNQDVTSVAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCFVERPEW 333
Query: 272 Y 272
+
Sbjct: 334 W 334
>gi|24645123|ref|NP_649814.1| CG8043 [Drosophila melanogaster]
gi|7299068|gb|AAF54268.1| CG8043 [Drosophila melanogaster]
gi|28557661|gb|AAO45236.1| GH14121p [Drosophila melanogaster]
gi|220946676|gb|ACL85881.1| CG8043-PA [synthetic construct]
gi|220956316|gb|ACL90701.1| CG8043-PA [synthetic construct]
Length = 348
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ + T DV + + + L G++L ++
Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 98
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ +T ++E DR L Y++R IE+ ++ W +
Sbjct: 99 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVMFNLKDASEAVP 156
Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153
N D R + + W K +D T Y LR G+
Sbjct: 157 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATAASSDNSYQLLRYKQGV 216
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T +
Sbjct: 217 GEGCSELTPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 276
Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
S +T ++G + K +A+ RI+KV + L + G R P W
Sbjct: 277 DVGSSQDVTSLAGAKLGRVFGFAHKHGIALLRIEKV---LNGRPELMIDGERCYVERPEW 333
Query: 272 Y 272
+
Sbjct: 334 W 334
>gi|114569363|ref|YP_756043.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis
maris MCS10]
gi|114339825|gb|ABI65105.1| glycine cleavage T protein (aminomethyl transferase) [Maricaulis
maris MCS10]
Length = 273
Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats.
Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + V G A LQ +ITADV TL R A+LTPQGKIL+ F++ + DT
Sbjct: 11 LPDRQIMSVSGPDARDLLQRLITADVQTLSAGTCRPGALLTPQGKILVDFMMF-ADGDTV 69
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L++ D L+ +L +KLR+ I + ++ W+ T S D R
Sbjct: 70 WLDVPAGAADGLLKRLTMFKLRARAEIVLNT--NILALWS--TTPFPGSCEDPRL---GG 122
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+HR G AS+ + + I GI D+ + +FP D +D G+ KGC+
Sbjct: 123 RVHRGLGEA---ASETRALDMIEIEAGIPAFGRDYGEADVFPTDVNLDAFGGVGWKKGCF 179
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
IGQEVVSR++ R IRKR + T + PP G+ ++ +G + G A+ +AR+D
Sbjct: 180 IGQEVVSRMKRRGTIRKRSLPATFAAEAPPPGTAVMAGPTTVGAISSASGHHAVILARLD 239
Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270
++ A G P
Sbjct: 240 RLRAAEHY---CEADGQEANIVVPD 261
>gi|67459203|ref|YP_246827.1| glycine cleavage T-protein [Rickettsia felis URRWXCal2]
gi|67004736|gb|AAY61662.1| Glycine cleavage T-protein [Rickettsia felis URRWXCal2]
Length = 282
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 21/283 (7%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ ++T D+ Y + +L QG+ L F + + +
Sbjct: 5 LSNREIIKIIGLDSVKFLQNLVTNDICKSSY---CYTYLLNNQGRYLFDFFVYVHKLEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +LI+ L FYK RS + II+ +V S + + + D R+S+
Sbjct: 62 YLDIDKSNKAALIEYLNFYKFRSKIQIIDCSEEYKIVYSHQKLDIDTLVTSRDPRYSMLG 121
Query: 125 VL----------LHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
R G + I + + Y E + N I+D D + P+
Sbjct: 122 FRSILSSRGLTTGSRNTGKQDWIPWSSHGMTIYLEDKYNFAIIDGVEDLITDKSIPNMYG 181
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGT 229
+ LN IS KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG
Sbjct: 182 AEELNAISFDKGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGV 241
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ KA+A+ R +K + K +TV G+++ S WY
Sbjct: 242 ICTSYRNKAIALIREEK--YLACKKSDITVKGIKINLSLAPWY 282
>gi|190570501|ref|YP_001974859.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|213019260|ref|ZP_03335067.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|190356773|emb|CAQ54134.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|212995369|gb|EEB56010.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 265
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 16/273 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L+N+S I + G FLQ +IT D+ L + A S +L PQGK L F + +
Sbjct: 1 MGYIPLANRSLISLYGPDTRDFLQGVITNDINKLSSQQAIYSLLLNPQGKYLYDFFLIEH 60
Query: 61 EEDTFILEIDRSKRDSLIDK---LLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSS-- 114
++ LE + + +I+K L Y ++R I GV+ S S
Sbjct: 61 DK-YIYLECENAHLQQIIEKLDLLKTYLRVRIK-DISSLYKVGVLFDAKLAKCSSKSQVI 118
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
F D R + + + E + D Y ++RI + + D D + ++ FP L+D
Sbjct: 119 FQDPRHKLLGMRIIHEDEIKEPVG-DFIQYEKVRIKNLVPDGAKDMVQNSSFPLQYLIDK 177
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV 233
+NGIS KGCYIGQEVV+R+ + R++ ++ G + LP G+ ++++ + E+G L
Sbjct: 178 INGISFNKGCYIGQEVVNRMSRQEKFRRKLYLVEGKNALPNIGTKVISEHNEEVGELRSS 237
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
V LA+ K L V GV +K
Sbjct: 238 VDNIGLALLNTGK------SHANLYVGGVSIKT 264
>gi|163734033|ref|ZP_02141474.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
gi|161392569|gb|EDQ16897.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
Length = 245
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 12/251 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++ + +++ G FLQ +IT D+ + + +A+LTPQGK L F I K D
Sbjct: 1 MTKRRILRLTGTDVTEFLQGLITNDIKGVETGL-VYAAMLTPQGKYLADFFICK-SGDAI 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++++ S D L +L YKLR++V IE + + D R
Sbjct: 59 LIDVAESHGDMLAQRLSMYKLRADVSIETTDL----HLHRGIGDPPAGALPDPRHP---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R + + LR+ H I + + P T F + + + G+ KGCY
Sbjct: 112 LGWRCYADTPQTDDTTDW-TALRVAHQIPETGIELTPDT-FILEVGFERIAGVDFRKGCY 169
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK ++ T G+ I + +G L G KALA R D
Sbjct: 170 VGQEVTARMKHKTELRKGLAQVSITGP-AEPGAEITANGKAVGVLQSRAGDKALAYLRYD 228
Query: 246 KVDHAIKKGMA 256
+ ++ G A
Sbjct: 229 RATGPMQAGAA 239
>gi|225470311|ref|XP_002267571.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 407
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 90/354 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47
L ++S ++ G + FLQ ++T DV + +LTP
Sbjct: 42 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 101
Query: 48 QGKILLYFLISKI----------------EEDT---FILEIDRSKRDSLIDKLLFYKLRS 88
QG+ L + + + D + ++D + D L+++ Y+LR+
Sbjct: 102 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNKYRLRA 161
Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115
+V+IE + + W + +S F
Sbjct: 162 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHVNSHGWQWF 221
Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + +D K Y R+ G+ + +T+ L P +
Sbjct: 222 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 281
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222
+ LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++
Sbjct: 282 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSDVINA 341
Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
+ GT+ + + L + R+ + A+K LT+ G V+V+A P W+
Sbjct: 342 VSGKKAGTVTTALECRGLGLLRL---NEALKGPSKLTIQGQEDVKVEAIRPEWW 392
>gi|302916931|ref|XP_003052276.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI
77-13-4]
gi|256733215|gb|EEU46563.1| hypothetical protein NECHADRAFT_37544 [Nectria haematococca mpVI
77-13-4]
Length = 389
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/338 (21%), Positives = 120/338 (35%), Gaps = 67/338 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLISK 59
L+++ I + G A FLQ I+TA+V P K +A LT G++L +
Sbjct: 44 LTPLTSRRLISIAGPDAAKFLQGIVTANVSAADGEPRKDGFYTAFLTATGRVLYDVFVYP 103
Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSN 112
EE F++E+D + L + YKLR+ + + + + V +W+ +
Sbjct: 104 NHGASAEEPGFLIEVDADQAKMLAKHIKRYKLRAKLAVRLLGEDEASVWHAWDDSKGTNW 163
Query: 113 SSFI--------DERFSIADVLLHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFL 161
S + D R R + +I S Y R HG+ + +
Sbjct: 164 DSIVNQTKLTLQDPRAPGLGCRFVRLDQNTPEIDLERSTEDAYTIRRYLHGVPEGQDEIS 223
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-------------- 207
P + MD++NGI KGCY+GQE+ R +HR ++RKR +
Sbjct: 224 REHALPQETNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCVIYEKEHAAPTELQ 283
Query: 208 TGTDDLPPSGSPILTD--------------DIEIGTLGVVVGKKALAIARI--------- 244
+ P+ D G VG L + R+
Sbjct: 284 YHAEGAAPALESATADMIPRDTSIGRFEKRGRSAGKWLKGVGNVGLGLCRLEIMTDVVLP 343
Query: 245 -DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273
+ A + GV+VKA P W +
Sbjct: 344 GETASAAFNPEDEFVLEWGDEGSRTGVKVKAFVPDWLR 381
>gi|325091183|gb|EGC44493.1| aminomethyltransferase [Ajellomyces capsulatus H88]
Length = 412
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/351 (21%), Positives = 130/351 (37%), Gaps = 81/351 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58
L ++ I V GK + FLQ ++T ++LT K +A L G++L I
Sbjct: 44 YTRLPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVPKSGFYAAFLNAPGRVLHDVFIY 103
Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107
+ + +++E+D+++ +L+ + +KLRS + V WN+E
Sbjct: 104 PVPPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEE 163
Query: 108 HT--------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHEL 147
+ +D R +A + D TY+
Sbjct: 164 DAGQLTECDFQLDNGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLR 223
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI HG+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR + +
Sbjct: 224 RILHGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILPV 283
Query: 208 TGTD-------------------DLPPSGSPIL----TDDIEIGTLGVVVGKKALAIARI 244
D LPP+G+ I G VG LA+ R+
Sbjct: 284 QLYDIDETMPKTETPYYSSESKLVLPPAGANIAKVSSKKGRSAGKFLSGVGNIGLALCRL 343
Query: 245 D----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ + + G+ T ++VKA P W +
Sbjct: 344 EMMTDIAFTDESSQYGPDQEFKISWEADPEAGVEKT-GELKVKALVPPWMR 393
>gi|84683617|ref|ZP_01011520.1| aminomethyltransferase [Maritimibacter alkaliphilus HTCC2654]
gi|84668360|gb|EAQ14827.1| aminomethyltransferase [Rhodobacterales bacterium HTCC2654]
Length = 249
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ N++ ++ G + FL ++T +V +A+ TPQGK + F +
Sbjct: 1 MTGETHENRTIFRITGADRVKFLDNLVTNNVK---PGGIAYAALQTPQGKYIADFFMVDT 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D ++++D +L +L YKLR++V IE + + +F D R
Sbjct: 58 G-DALLIDVDSDLAQTLGQRLTMYKLRADVQIEPTEL----FALRGRKDMPEGAFPDPRH 112
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ L R + A + LR+ + + P T F +A D LNG+
Sbjct: 113 A---ALGWRLYSDTPGDA-PTTDWEALRVELNVPASGAELTPDT-FILEAGFDRLNGVDF 167
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD-IEIGTLGVVVGKKAL 239
KGC++GQEV +R++H+ +RK + + + G+ I TDD G L G +A+
Sbjct: 168 KKGCFVGQEVTARMKHKTELRKGFVTVAVDGE-AEPGTEITTDDGKPAGMLHTRAGDRAI 226
Query: 240 AIARIDKVDHAIKKGMA 256
A R D+ + + G A
Sbjct: 227 AYLRFDRAERPMTAGDA 243
>gi|195330640|ref|XP_002032011.1| GM23750 [Drosophila sechellia]
gi|194120954|gb|EDW42997.1| GM23750 [Drosophila sechellia]
Length = 347
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ + T DV + + + L G++L ++
Sbjct: 38 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 97
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ +T ++E DR L Y++R IE+ ++ W +
Sbjct: 98 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVP 155
Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153
N D R + + W K +D T Y LR G+
Sbjct: 156 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASSDNSYQLLRYKQGV 215
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T +
Sbjct: 216 GEGCSELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 275
Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
S +T ++G + K +A+ RI+KV + L + G R P W
Sbjct: 276 DVGSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVERPEW 332
Query: 272 Y 272
+
Sbjct: 333 W 333
>gi|85084479|ref|XP_957315.1| hypothetical protein NCU06424 [Neurospora crassa OR74A]
gi|74628446|sp|Q7RYZ1|CAF17_NEUCR RecName: Full=Putative transferase caf-17, mitochondrial; Flags:
Precursor
gi|28918405|gb|EAA28079.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 439
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 84/355 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE- 61
L+++ I V G A FLQ +IT ++ + LT QG+++ +I +
Sbjct: 56 LTKLTSRRLISVSGPDASKFLQGVITNNINAPHNANGFYTGFLTAQGRVVHDVIIYPDDL 115
Query: 62 -----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQ-------- 106
+ +F++E+D + +L + YKLRS +++ + SWN
Sbjct: 116 GPEPGKQSFLIEVDADEAATLHKHIKRYKLRSKFNLKLLDPEERALYHSWNDVDQAGPWT 175
Query: 107 ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-----IKTYHELRINHGIVD 155
++ + + D R + + +D +YH R GI +
Sbjct: 176 KLIDEVQNAGNARAVPDPRVPAFGSRVVVNQTSSSSPLTDGDLTPESSYHLRRFLLGIPE 235
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDL 213
++ + T P ++ MD++NGI KGCY+GQE+ R +HR ++RKR + +
Sbjct: 236 GQSEIISGTALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYYEGAA 295
Query: 214 P------------------------------PSGSPILTDDIEI----GTLGVVVGKKAL 239
P P G+ I D + G +G L
Sbjct: 296 PEIPADGPGQLEALEKLLKPEVEQGVKAEMIPQGASIDKVDKKSRSAPGKWLRGIGNVGL 355
Query: 240 AIARIDKVDHAI---------------------KKGMALTVHGVRVKASFPHWYK 273
A+ R++ + + ++G + V+VKA P W K
Sbjct: 356 ALCRLEVMTDTVLPGETPGTYSPEQDFVVSLGGEEGSEVEAKKVKVKAFVPFWLK 410
>gi|71649960|ref|XP_813688.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878596|gb|EAN91837.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 319
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 34/304 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60
LS++S I+V G +A FLQ + T D+ L + L G+++ + +
Sbjct: 5 CLLSSRSLIRVSGAAAHEFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------Q 106
E ++++ R D+L D LL ++R + IE VV++ + +
Sbjct: 65 DGGEVCILVDVHRDVVDTLHDHLLDMRMRRRLQIENAGKEFVVVAGSSYGNGGIYEEEEE 124
Query: 107 EHTFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNTD 159
E T SS F+D R L ++ + + Y GI +
Sbjct: 125 EKTPPLSSECETFMDPRSFAFPAPLQKSIFPLSKAPSVTDPVARYETFLYTAGIGEGPDV 184
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GT 210
F P+ FP + D L G+S KGCY+GQE+ R + RKR + + G
Sbjct: 185 FKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGGG 244
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFP 269
G +L D+ ++G L V G L + R+ VD A + L + V V + P
Sbjct: 245 RRSVEKGEALLIDERKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLKDDVPVAITIP 304
Query: 270 HWYK 273
W++
Sbjct: 305 GWWE 308
>gi|225561737|gb|EEH10017.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 412
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 74/351 (21%), Positives = 130/351 (37%), Gaps = 81/351 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58
L ++ I V GK + FLQ ++T ++LT K +A L G++L I
Sbjct: 44 YTRLPTRALIAVTGKDSTTFLQGLVTQNLLTARNTPVPKSGFYAAFLNAPGRVLHDVFIY 103
Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107
+ + +++E+D+++ +L+ + +KLRS + V WN+E
Sbjct: 104 PVPPNDSYNGTSDLAYLIEVDKNEVQTLLKHMKKHKLRSKLAFRAMDEGELCVFSLWNEE 163
Query: 108 HT--------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHEL 147
+ +D R +A + D TY+
Sbjct: 164 DAGQLTECDFQLDNGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLR 223
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI +G+ + ++ + + P + MD++ GI KGCY GQE+ R HR ++RKR + +
Sbjct: 224 RILYGVPEGQSEIIRESALPMECNMDIMGGIDFHKGCYTGQELTIRTHHRGVVRKRILPV 283
Query: 208 TGTD-------------------DLPPSGSPIL----TDDIEIGTLGVVVGKKALAIARI 244
D LPP+G+ I G VG LA+ R+
Sbjct: 284 QLYDIDETMPKTETPYYSSESKLVLPPAGANIAKVSSKKGRSAGKFLSGVGNIGLALCRL 343
Query: 245 D----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ + + G+ T ++VKA P W +
Sbjct: 344 EMMTDIAFTDESSQYGPDQEFKISWEADPEAGVEKT-GELKVKALVPPWMR 393
>gi|71664696|ref|XP_819326.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884622|gb|EAN97475.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 320
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 35/305 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60
LS++S I+V G +A FLQ + T D+ L + L G+++ + +
Sbjct: 5 CLLSSRSLIRVSGAAAHDFLQGLFTNDLRLLHPGGSIWGCFLYHTGRLMCDAYLYQPSRV 64
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------- 105
+ ++++ R D+L D LL ++R + I+ VV++ +
Sbjct: 65 HGGDVCILVDVHRDVVDTLHDHLLDMRMRRRLQIDNAGKEFVVVAASSYGNGGIYEAEEE 124
Query: 106 QEHTFSNSS----FIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIVDPNT 158
+E T SS F+D R LH++ + + Y GI +
Sbjct: 125 EEKTPPPSSECETFMDPRSFAFPAPLHKSIFPLSKAPSVTDSVARYETFLYTAGIGEGPD 184
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD------- 211
F P+ FP + D L G+S KGCY+GQE+ R + RKR + +
Sbjct: 185 VFKPAKSFPFECNTDFLRGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLRLPSFQEETGS 244
Query: 212 --DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASF 268
G +L D ++G L V G L + R+ VD A + L + V V +
Sbjct: 245 GRRSVEKGEALLIDGRKVGELLTVCGDVGLGLLRLRYVDAATRTAPGLKLEDDVPVVITI 304
Query: 269 PHWYK 273
P W++
Sbjct: 305 PGWWE 309
>gi|195572493|ref|XP_002104230.1| GD18562 [Drosophila simulans]
gi|194200157|gb|EDX13733.1| GD18562 [Drosophila simulans]
Length = 347
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ + T DV + + + L G++L ++
Sbjct: 38 TLEPLGNRELIRVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILY 97
Query: 59 KIE-EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFS 111
+ +T ++E DR L Y++R IE+ ++ W +
Sbjct: 98 RTNNPETILVECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTPWVLFNLKDASEAVP 155
Query: 112 NSSF-----IDERFSIADVLLHRT----WGHNEKIASDIKT---------YHELRINHGI 153
N D R + + W K +D T Y LR G+
Sbjct: 156 NPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFTDFGTATAASPDNSYQLLRYKQGV 215
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ ++ P FP +A D L+G+S KGCY+GQE+ +R+ H +IRKR M I T +
Sbjct: 216 GEGCSELPPGKCFPLEANADYLHGVSFHKGCYVGQELTARVHHSGVIRKRYMPIRLTAPI 275
Query: 214 PPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
S +T ++G + K +A+ RI+KV + L + G R P W
Sbjct: 276 DVGSSQDVTSLAGAKLGRVFGFAHKHGVALLRIEKV---LNGRPELMIDGERCYVDRPEW 332
Query: 272 Y 272
+
Sbjct: 333 W 333
>gi|296082848|emb|CBI22149.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 90/354 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAILTP 47
L ++S ++ G + FLQ ++T DV + +LTP
Sbjct: 5 LKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTP 64
Query: 48 QGKILLYFLISKI----------------EEDT---FILEIDRSKRDSLIDKLLFYKLRS 88
QG+ L + + + D + ++D + D L+++ Y+LR+
Sbjct: 65 QGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNKYRLRA 124
Query: 89 NVIIE----------------------IQPINGVVLSWNQEHTFSNSS-----------F 115
+V+IE + + W + +S F
Sbjct: 125 DVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHGNSHGWQWF 184
Query: 116 IDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + +D K Y R+ G+ + +T+ L P +
Sbjct: 185 KDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEY 244
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILT- 222
+ LN IS KGCY+GQE+++R HR +IRKR + + DD GS ++
Sbjct: 245 NLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGSDVINA 304
Query: 223 -DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
+ GT+ + + L + R+ + A+K LT+ G V+V+A P W+
Sbjct: 305 VSGKKAGTVTTALECRGLGLLRL---NEALKGPSKLTIQGQEDVKVEAIRPEWW 355
>gi|83594272|ref|YP_428024.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodospirillum rubrum ATCC 11170]
gi|83577186|gb|ABC23737.1| Glycine cleavage T protein (aminomethyl transferase)
[Rhodospirillum rubrum ATCC 11170]
Length = 312
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 37/299 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ + + G + FLQ +++ DV + A +A LTPQGK L F + + E
Sbjct: 14 LCPRPDRGVLGLSGADRVSFLQGLVSNDVTRAGPEQALWAAFLTPQGKYLHDFFVVSVGE 73
Query: 63 DT---FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------ 113
+L + ++ + L +L Y+LRS V +++ V + + S
Sbjct: 74 GESARLLLVGEAARLEDLRARLSRYRLRSKVTLDLAGGWTVAVIPGRNAAASLGLPDRPG 133
Query: 114 ----------SFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+F+D R S A V LL + + R+ G+ + + D
Sbjct: 134 AMRALDGGGLAFVDPRLSAAGVHLLLPEAAAKPPLPLGEESLWQAHRLALGLPEGSDDLE 193
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI- 220
P + + L G+ KGCY+GQE+ +R ++R +++KR + + LP GS +
Sbjct: 194 PEKALLLENGFEELGGVDFKKGCYMGQELTARTKYRGLVKKRLIPVAIDGPLPAPGSALR 253
Query: 221 LTDDIEIGTLGVVVGKKALAIARID------KVDHAIKKGMALTV--HGVRVKASFPHW 271
+ ++ G + + R D + + G + G + S P W
Sbjct: 254 TGEGLDAGEMRS-------GLVRADGQTLGLALLRLARLGGPILAEDGGATLTPSIPSW 305
>gi|84500029|ref|ZP_00998295.1| aminomethyl transferase family protein [Oceanicola batsensis
HTCC2597]
gi|84391963|gb|EAQ04231.1| aminomethyl transferase family protein [Oceanicola batsensis
HTCC2597]
Length = 251
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 13/250 (5%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + I+V G FLQ ++T D+ L +A+LTPQGK++ FL+ + + + +
Sbjct: 5 NERRVIRVGGSDTFDFLQNLVTNDLDRLSEGP-VYAALLTPQGKLIADFLVLQ-DGEALL 62
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+++ + D L+ +L Y+LR++V IE + + D R L
Sbjct: 63 VDVAEAFADPLVQRLNMYRLRADVRIEPTG----IKVRRGTGAAPEGAVADPRHPS---L 115
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
R +G ++ D + +R+ I + + P T +A D LNG+ KGCY+
Sbjct: 116 GWRLYGESD--GDDGTDFAAIRVAGVIPESGIELGPETYI-LEAGFDRLNGVDFRKGCYV 172
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
GQEV +R++H+ +RK + + P +G+ I + ++G L +A+A AR D+
Sbjct: 173 GQEVTARMKHKTELRKGLIRVDVEGAAP-AGTEIEREGKKVGILYTQSDGQAIAYARFDR 231
Query: 247 VDHAIKKGMA 256
+ + G A
Sbjct: 232 LAPGMTAGEA 241
>gi|115387399|ref|XP_001211205.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195289|gb|EAU36989.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1258
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 72/355 (20%), Positives = 129/355 (36%), Gaps = 84/355 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+++ I V G + FLQ +IT D + +A L G+IL
Sbjct: 865 YARLTHRGLISVTGVDSTSFLQGLITQNMLVTNDPNRSTRRTGSYTAFLNSHGRILNDAF 924
Query: 57 ISKI-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE-- 107
+ + E ++++EID+++ +L+ L +KLR+ + + + +W
Sbjct: 925 LYPLPSADAGESSWLIEIDKNEVPALMKHLKKHKLRAKLKLRALDDGERTIWAAWKDHME 984
Query: 108 ----------------HTFSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKT 143
+ ID R L G NE +++
Sbjct: 985 PRWAAYNLEAAAGPFSAAPEIAGCIDTRAPGFGSRLVTPGAEDLRTHLGENEVAGDEVEL 1044
Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
Y R+ HGI + ++ + + P ++ MD+++GI KGCY+GQE+ R H ++R
Sbjct: 1045 GGYTVRRMMHGIAEGQSEIIRESALPLESNMDMMHGIDFRKGCYVGQELTIRTHHTGVVR 1104
Query: 202 KRPMIITGTD--------------------DLPPSGSPILTD----DIEIGTLGVVVGKK 237
KR + + D +PP+G+ I G VG
Sbjct: 1105 KRILPVQLYDGDLGELASAELPTYDPSAALGVPPAGTNIAKAGARRGRSAGKFLGGVGNI 1164
Query: 238 ALAIARID------KVDHAIK-------------KGMALTVHGVRVKASFPHWYK 273
LA+ R++ D A + + V++KA P W +
Sbjct: 1165 GLALCRLEMMTDITLTDEATQYNPEQEFKVSWTGEESPAGAGEVKIKAMVPPWTR 1219
>gi|89055962|ref|YP_511413.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia
sp. CCS1]
gi|88865511|gb|ABD56388.1| glycine cleavage T protein (aminomethyl transferase) [Jannaschia
sp. CCS1]
Length = 247
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+++ +++ G A FLQ ++T D + SA+LTPQGK L F + +D +L
Sbjct: 8 DRTILRLSGADAHGFLQGLVTRD----AGEGLTYSALLTPQGKYLADFFLLDRGDD-ILL 62
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
++ ++ +L Y+LR++V IE + +F D R
Sbjct: 63 DVKSDIARAVAQRLGMYRLRADVTIEEADLPVA----RGLGDMPAGAFADPRDPSLGWRA 118
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+ G + + + LR+ + + + P+ + +A D L G+ KGCY+G
Sbjct: 119 YGVAGGDP-----VTDWTALRVAACVPETGVELTPNDTYILEAGFDRLCGVDHKKGCYLG 173
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
QEV +R++H+ ++K + ++ P G+ I+ + GTL G + +A R D+
Sbjct: 174 QEVTARMKHKTELKKGFVTVSVDGTAP-VGTAIMAGEKPAGTLYTQAGGQGIAYLRFDRA 232
Query: 248 DHAIKKGMA 256
+ A
Sbjct: 233 TGPMTAAEA 241
>gi|310816646|ref|YP_003964610.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare
Y25]
gi|308755381|gb|ADO43310.1| aminomethyl transferase family protein [Ketogulonicigenium vulgare
Y25]
Length = 246
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 13/248 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G +PFLQ ++T DV +A+LTPQGK + F + + +L+
Sbjct: 5 RKVFAITGTDRLPFLQNLVTNDVKR-AEGALVYTALLTPQGKFIADFFL-HEDGSRLLLD 62
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+D +LI +L Y+LR++V I + + + D R L
Sbjct: 63 VDAGAAAALIPRLSMYRLRADVQIAETDL----VVSRGTGDAPAGALADPRDPR---LGW 115
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
R +G + SD + LR++ + + + + + + L+G+ KGCY+GQ
Sbjct: 116 RLYGAAD--VSDATDWDALRVDLLVPEMGAELT-GESYILENGFERLHGVDFRKGCYVGQ 172
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + D P G+ I+ D E G L G +A+A R D+
Sbjct: 173 EVTARMKHKTELRKGLARVQVVGDAAP-GTVIMAGDREAGQLLTRAGDQAIAYLRFDRAG 231
Query: 249 HAIKKGMA 256
+ G A
Sbjct: 232 GEMTAGSA 239
>gi|115955869|ref|XP_001192913.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 291
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 26/269 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57
++ L+ +S + V G+ A LQ ++T DV L + S L QG++L +
Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79
Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110
+ D +++LE D + L L Y++R V I + V ++ T
Sbjct: 80 YQWSNDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139
Query: 111 SNSS----------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNT 158
S F D + + + G + + Y R G+ +
Sbjct: 140 PPSPGSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVN 199
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPP 215
+ P P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I P
Sbjct: 200 ELPPGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIP 259
Query: 216 SGSPI-LTDDIEIGTLGVVVGKKALAIAR 243
+G+ I + +G + LA+ R
Sbjct: 260 AGTSIKTAEGKNVGKFRCHLHHNGLALLR 288
>gi|242022699|ref|XP_002431776.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517101|gb|EEB19038.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 328
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 41/305 (13%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIE-E 62
L+ +S +++ GK A +LQ +IT D+ L + + L +G++L +I E
Sbjct: 16 RLNERSLLRLSGKDANLYLQGLITNDMKHLESGASSMYTMFLNSKGRVLYDSIIYNTNIE 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116
+TF +E D + L D L+ +K+R V I++ V + + N +
Sbjct: 76 NTFYVECDSNASLYLKDHLMHFKVRRKVNIDLLSDEFSVWALAFKDYIINPKDVYNYKPV 135
Query: 117 ---------------DERFSIADV---------LLHRTWGHNEKIASDIKTYHELRINHG 152
D R + L++ + + Y LR N G
Sbjct: 136 LNELKKNLPQLIITNDPRLPSMGLRVLTPKDYNLVNEIKKIADVNVQEENFYKFLRYNLG 195
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + + FP + D L+GIS KGCY+GQE+ +R H +IRKR M + ++
Sbjct: 196 IGEGLNELPLEKCFPMEINGDYLHGISFHKGCYVGQELTARTYHTGVIRKRIMPLKFNEE 255
Query: 213 LP--PSGSPILTDD---IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ G PI + IG L V L + RI+ A+K +T +
Sbjct: 256 VSITQPGIPIFSVSQLTKAIGKLFGVEQTSGLGLLRIE---EALKANELITFEK-KCNTH 311
Query: 268 FPHWY 272
P W+
Sbjct: 312 RPFWW 316
>gi|156058962|ref|XP_001595404.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980]
gi|154701280|gb|EDO01019.1| hypothetical protein SS1G_03493 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 411
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 72/342 (21%), Positives = 125/342 (36%), Gaps = 72/342 (21%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---- 59
LS + I + G + +LQ +IT D+ K SA L QG++L I +
Sbjct: 69 ARLSTRRLISLRGPDSTKYLQGVITNDIYKEGNKNGFYSAFLNAQGRVLNDVWIYRDIYA 128
Query: 60 -------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING------------- 99
E D +++E+D + + L + Y++R+ ++I
Sbjct: 129 DLKGDKTTEGDNWLIEVDAKQVEVLAKHIKRYRMRAKFDVDIVDEEEKKIYSLWGTKVGV 188
Query: 100 -VVLSWNQEHTFSNSSFI--DERFSIADVL--------LHRTWGHNEKIASDIKTYHELR 148
V+ + ++ + + D R +H E Y R
Sbjct: 189 RVIDAQERDREKAQQGIVTSDTRAPGMGNRVIVNKGWHMHMDIQDAEVQMHGENVYRARR 248
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR---PM 205
G+ + + L + P ++ +D++ GI TKGCY+GQE+ R H +IRKR M
Sbjct: 249 YLIGVPEGQDEILRESALPQESNIDVMGGIDYTKGCYVGQELTIRTHHTGVIRKRIVPMM 308
Query: 206 IITGTDDLPPSGSPILTDD------------------IEIGTLGVVVGKKALAIARIDK- 246
++ +D+P G +G VG L +AR+D+
Sbjct: 309 LVPDGEDMPGLGELKYKGGHLASWLNGGENIKKVGGKRPVGKWLSGVGNLGLGLARLDEM 368
Query: 247 ------------VDHAIKKGMALT---VHGVRVKASFPHWYK 273
VD + +G V +RV+A P W +
Sbjct: 369 GKWMVEEKEAGGVDEFVAEGKGEKEGEVRNIRVRAFPPAWIE 410
>gi|261189571|ref|XP_002621196.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081]
gi|239591432|gb|EEQ74013.1| aminomethyl transferase [Ajellomyces dermatitidis SLH14081]
gi|239613037|gb|EEQ90024.1| aminomethyl transferase [Ajellomyces dermatitidis ER-3]
gi|327356927|gb|EGE85784.1| aminomethyl transferase [Ajellomyces dermatitidis ATCC 18188]
Length = 437
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/350 (20%), Positives = 127/350 (36%), Gaps = 80/350 (22%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP----YKIARGSAILTPQGKILLYFLIS 58
L ++ I + GK + FLQ ++T ++LT + +A L G++L I
Sbjct: 47 YARLPTRALITLTGKDSTSFLQGLVTQNLLTPQNTPVPQSGFYAAFLNAPGRVLHDVFIY 106
Query: 59 KIEED---------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107
+ + +++E+D+++ +L+ + +KLR+ + V WN+E
Sbjct: 107 PVPPNDSYNGTSDLAYLIEVDKNEVTNLMKHMRKHKLRAKLAFRAMDEGELNVFSLWNEE 166
Query: 108 HT-------------FSNSSFIDERFS------IADVLLHRTWGHNEKIASDIKTYHELR 148
+ +D R +A + D TY+ R
Sbjct: 167 DAGIMEYDFQLENGKSPPFTCVDTRAPGFGFRFLAPEKVVNEQPIMPGEMVDFATYNLRR 226
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I HG+ + + + + P + MD++ I KGCY GQE+ R HR ++RKR + +
Sbjct: 227 ILHGVPEGQGEIIRESALPMECNMDIMGAIDFHKGCYTGQELTIRTHHRGVVRKRILPVQ 286
Query: 209 GTDD-------------------LPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245
D LPP+GS I G VG LA+ R++
Sbjct: 287 LYDMDEPIPETDVPNYSSESKLVLPPAGSNIAKVSSRKGRSAGKFLSGVGNIGLALCRLE 346
Query: 246 ----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ + G+ ++VKA P W +
Sbjct: 347 MMTDIVFTEESSQYNPDQEFKISWEADAEAGVE-KAGELKVKALVPPWTR 395
>gi|268564264|ref|XP_002639061.1| Hypothetical protein CBG14872 [Caenorhabditis briggsae]
gi|187027514|emb|CAP33284.1| hypothetical protein CBG_14872 [Caenorhabditis briggsae AF16]
Length = 281
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ +
Sbjct: 6 LIKLPHRVILKLHGADTNAFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGT 65
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D LE ++ + L+ ++L Y+LR V I + + Q T +S + D RFS
Sbjct: 66 DDVFLECSKANQSVLVKEILKYRLRKRVEISETTDQ---VFFEQISTDKSSEYRDPRFSN 122
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ +E ++ + + Y LR ++GI + + + + P A DLLN +SL K
Sbjct: 123 FGARVFGNPSSSE-VSENREAYENLRRSNGIAEGAVEL--ADLLPFQANGDLLNMVSLDK 179
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241
GCYIGQE+ +R H +IR+R + + G+ IL + ++G + + L I
Sbjct: 180 GCYIGQELTARTAHTGVIRRRILPFECEGQV-KIGADILDEKKNKVGKIISSDSTRCLGI 238
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
++ A K L+ V + A P W
Sbjct: 239 LQL-----ASFKSPKLSADDVALTARQPEW 263
>gi|40063600|gb|AAR38389.1| glycine cleavage system T protein [uncultured marine bacterium 582]
Length = 252
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M ++ ++ G FLQ ++T DV + SAILTPQGK + F + +
Sbjct: 1 MPYTR--DRHIFEIRGHDRAGFLQGLVTNDVSQ-TPQALTYSAILTPQGKFITDFFLFQ- 56
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+E +++ S +L +L YKLR+ V I+ P+ + + + D R
Sbjct: 57 DEKAIYMDVADSAAPALSTRLNMYKLRAEVTIDDSPLK----VFCGTGSAPQGAKSDPRD 112
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R +G E+ D + LR+ I + + + + L+G+
Sbjct: 113 RS---LGWRLYG--ERSGDDGSDWTALRVAACIPAVTIELTADSYI-LENGFERLHGVDF 166
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+ +R++H+ +RK + P +G+ I+ D +G L G LA
Sbjct: 167 KKGCYVGQEITARMKHKATLRKGLAQVRVDGKAP-TGTDIVADGKNVGVLYSQSGGLGLA 225
Query: 241 IARIDKVDHAIKKGMA 256
R D+ ++ A
Sbjct: 226 YLRFDRATDKMQAASA 241
>gi|115715690|ref|XP_001188789.1| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 269
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLISKIE 61
L+ +S + V G+ A LQ ++T DV L + S L QG++L + +
Sbjct: 2 RLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMCYQWS 61
Query: 62 ED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS 114
D +++LE D + L L Y++R V I + V ++ T S
Sbjct: 62 NDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTPPPSP 121
Query: 115 ----------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLP 162
F D + + + G + + Y R G+ + + P
Sbjct: 122 GSNKSGPFHFFTDPKVNGLGQRVIVPQGSQVPGIEEVNEEDYMTHRYQWGVAEGVNELPP 181
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSP 219
P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I P+G+
Sbjct: 182 GDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAGNAIPTIPAGTS 241
Query: 220 I-LTDDIEIGTLGVVVGKKALAIAR 243
I + +G + LA+ R
Sbjct: 242 IKTAEGKNVGKFRCHLHHNGLALLR 266
>gi|58584606|ref|YP_198179.1| aminomethyltransferase related to GcvT [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418922|gb|AAW70937.1| Predicted aminomethyltransferase related to GcvT [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 265
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 16/273 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L ++ I + G FLQ +IT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MGYIPLPSRGVIVLYGPDTRDFLQGVITNDINKLNSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114
+ +LE + +I+KL K LR + +I + V + ++ + T ++
Sbjct: 61 GK-CILLECENMYLQQIIEKLDLLKTYLRVKIK-DISALYKVGILFDTKSTECSNESQVI 118
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
F D R + ++ + E + D Y +RI + + D D + + FP L+D
Sbjct: 119 FQDPRHKLLEMRIIHKNEIKE-LVGDFAQYERVRIQNLVPDGAKDMVQNLSFPLQYLIDK 177
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233
+NGIS KGCYIGQEVVSR+ + I RK+ ++ G + LP G+ + ++ E+G L
Sbjct: 178 INGISFNKGCYIGQEVVSRMSRQEIFRKKLYLVEGDNALPNIGTKVTNENNEEVGELRSS 237
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ LA+ K L G+ V
Sbjct: 238 IDNIGLALLNTGK------SHTNLYADGIGVFV 264
>gi|242777590|ref|XP_002479065.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722684|gb|EED22102.1| aminomethyl transferase, putative [Talaromyces stipitatus ATCC
10500]
Length = 446
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/367 (19%), Positives = 131/367 (35%), Gaps = 99/367 (26%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFLISK 59
L+N++ I + G + FLQ +IT ++ + P + SA L QG++L I
Sbjct: 40 LTNRALIAITGVDSTSFLQGMITQNMLMGKEPVRAPRRTGSYSAFLNSQGRVLHDVFIYP 99
Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
I +E +++E+D+++ +L+ L +KLR+ + + + +WN
Sbjct: 100 ITKGNLGHSNESPDEAAWLIEVDKAEVSNLMKHLKKHKLRAKLTLRALEDGEQSIWAAWN 159
Query: 106 QEHTFSNSSF----------IDERFSIADVLLHRTWG---------------------HN 134
E T + + + + + R G
Sbjct: 160 NESTEPRWAAYNLESDFPSQLADNSPVVGCIDTRAPGFGTRYITPGPDDLQIHLPAETKL 219
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ + D++TY R +G+ + + + + P + MD+ GI KGCY+GQE+ R
Sbjct: 220 QGLQVDLETYKLRRYLYGVAEGQGEIIRESSLPMECNMDVARGIDFRKGCYVGQELTIRT 279
Query: 195 QHRNIIRKRPMIITG----------------------TDDLPPSGSPI----LTDDIEIG 228
H ++RKR + + PP+G+ I G
Sbjct: 280 HHTGVVRKRILPVQLYGVDEDTTTSSSSSAPIYDLETQTTQPPTGANISRVGTRKGRSAG 339
Query: 229 TLGVVVGKKALAIARID----------------------KVDHAIKKGMALTVHGVRVKA 266
VG LA+ R++ D G+ V++KA
Sbjct: 340 KFISGVGNVGLALCRLEMMTDISLTGESSQYNPSQEFQVSWDAGSAAGLVSQQGAVKIKA 399
Query: 267 SFPHWYK 273
P W +
Sbjct: 400 IVPSWLR 406
>gi|296809796|ref|XP_002845236.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480]
gi|238842624|gb|EEQ32286.1| hypothetical protein MCYG_05105 [Arthroderma otae CBS 113480]
Length = 408
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 56/297 (18%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK- 59
+L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 HLTNRSLISLSGIDSTKFLQGLITRNLSVPNNSPPTTSPFYAAFLNSQGRILNDVFIYPQ 107
Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWN------- 105
+E +++E+D+ SL+ +KLRS + V W+
Sbjct: 108 TAASSPDEMEYLIEVDKEHSASLLKHFKRHKLRSKLKFRALDEGERSVWALWDDGNISTY 167
Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGI 153
+ SN++ I A + +R +K+ + ++TY RI G+
Sbjct: 168 HENEAISNNNAIACPDKRAPGMGYRLIASGDKLQTQIMEALPGDETSLQTYTLRRILQGV 227
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-- 211
+ T+ + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 228 AEGQTEMARESALPMDSNVDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYGLG 287
Query: 212 -----------------DLPPSGSPI------LTDDIEIGTLGVVVGKKALAIARID 245
LP +G+ G +G LA+ R++
Sbjct: 288 QSPPTSDSPVYEPDTNIILPSAGTEANISKVGTVKGRSAGKFLTGIGNVGLAVCRLE 344
>gi|71019851|ref|XP_760156.1| hypothetical protein UM04009.1 [Ustilago maydis 521]
gi|74701127|sp|Q4P7A4|CAF17_USTMA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|46099873|gb|EAK85106.1| hypothetical protein UM04009.1 [Ustilago maydis 521]
Length = 403
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/341 (20%), Positives = 123/341 (36%), Gaps = 70/341 (20%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLP-------YKIARGSAILTPQGKILLY 54
+ ++ ++V G+ + LQ +++ DV L + + PQG++L
Sbjct: 51 KLAKVPHRGVVQVSGRDTVKLLQGLVSNDVKALDSTTLTHQPPNMVYAGFMNPQGRMLAD 110
Query: 55 FLISKIEEDT-----FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW---- 104
I + + ++L+ID SL+ + +KLRS V + ++ VV +W
Sbjct: 111 VFIHRQPANQDGSPRWLLDIDSRTLPSLVAFIKKFKLRSKVKLTDLSTDYHVVQAWDSNS 170
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTD 159
T + ID R + +A+ T Y RI +G+ + D
Sbjct: 171 QAPPTIAEKLSIDPRSPSIGYRGVLSAAEILDVAAAASTVDGLEYTLHRITNGVAEGALD 230
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGS 218
F ++ P + +D ++G+ KGCY+GQE+ +R H ++RKR + ++ PP S
Sbjct: 231 FPQASSLPLENNLDYMHGVDFRKGCYVGQELTARTHHTGVVRKRIVPLSFYLAGTPPPAS 290
Query: 219 ----------------------PILTD---------DIEIGTLGVVVGKKALAIARIDKV 247
PI T G V LA R+++V
Sbjct: 291 IHDVDPAFPHQLPTHLAEIRSKPISTASEAATKPARGKAAGKFTSGVYNVGLACLRLEQV 350
Query: 248 DHAIKKGMA-------------LTVHGVR---VKASFPHWY 272
A L+ G + P W+
Sbjct: 351 RRWADSSSADPNSKHDALEFSVLSADGETTLLARPWIPSWW 391
>gi|221116643|ref|XP_002154366.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 560
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 11/263 (4%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
V GK LQ +IT DV L + S +L QG+IL + K E +++E +
Sbjct: 298 VHGKDCKKLLQGMITNDVSLLDNNLVNCIYSMVLNVQGRILYDLFLHKHEH-GYLMECNS 356
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
+D L+ L YKLRS V E + V +S++ + +D R T
Sbjct: 357 CFKDELVSYLNRYKLRSKVFFENRDDLNVYVSFS--SDMFDHFVVDPRLPKLGYRNLSTK 414
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+ DI Y LR GI + P + + LLNG+S TKGCYIGQE+V
Sbjct: 415 KIVKNDFGDISCYTNLRYQLGISEGVEVI---NGIPLEHNLALLNGVSFTKGCYIGQELV 471
Query: 192 SRIQHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249
+R H ++RKR + + + + L + + D ++G L + GK A+ + R+ ++
Sbjct: 472 ARAHHTGVVRKRVVPLLLSREHCLLDGNTVCMEGDFQVGKLLGISGKNAIGLLRLKEIFD 531
Query: 250 AIKKGMALTVHGVRVKASFPHWY 272
K + + + VKA P W+
Sbjct: 532 DKNK-LHIKDSDISVKAFKPDWW 553
>gi|157825884|ref|YP_001493604.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford]
gi|157799842|gb|ABV75096.1| hypothetical protein A1C_04115 [Rickettsia akari str. Hartford]
Length = 308
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 47/309 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT D+ + +LT QG+ L F + +
Sbjct: 5 LSNREIIKIIGLDSVKFLQNLITNDIKK---SQYCYTYLLTNQGRYLFDFFVYVRNLEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +LI+ L FYKLRS + II+ V+ S + + + D R+S+
Sbjct: 62 YLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLG 121
Query: 125 VL------------------LHRTWGH---------------------NEKIASDIKTYH 145
+ + W + + + Y
Sbjct: 122 FRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLYL 181
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++
Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241
Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
IT +DL IL +IG + KA+ + R +K + K +TV G++
Sbjct: 242 KITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEK--YFACKEADITVKGIK 299
Query: 264 VKASFPHWY 272
+ S WY
Sbjct: 300 INLSLAPWY 308
>gi|157803675|ref|YP_001492224.1| glycine cleavage T-protein [Rickettsia canadensis str. McKiel]
gi|157784938|gb|ABV73439.1| Glycine cleavage T-protein [Rickettsia canadensis str. McKiel]
Length = 276
Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 15/277 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ IK+ G ++ FLQ ++T D+ + +L +GK L F + +
Sbjct: 5 LSDREVIKIIGLDSVKFLQNLVTNDIKK---SKYCYTYLLNNKGKYLFDFFVYIHNFEEL 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +LID L FYK RS + II+ V+ S + + + D R++
Sbjct: 62 YLDIDKSNKATLIDHLNFYKFRSKIQIIDCHDKYKVIYSHQKLDIDTLVTSRDPRYTKLG 121
Query: 125 VL--LHRTWGHN-EKIASDIKT----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
++RT + + + Y E + N I+D D + P + LNG
Sbjct: 122 FRSIVNRTLKDTLDPLCHSREDKNPIYLEDKYNFAIIDGVEDLSFNKSIPILYGGEELNG 181
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVG 235
IS KGCY+GQEV+SR +++ IIR++ + +DL IL D+ IG +
Sbjct: 182 ISYYKGCYVGQEVISRAKYQGIIRRKIYKVIADEDLSSLVKDEEILADNDTIGIICSSYH 241
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
KA+A+ R++K + K +++V G+ ++ S WY
Sbjct: 242 NKAIALIRVEK--YLAVKESSISVKGISIELSLAPWY 276
>gi|289620040|emb|CBI53484.1| unnamed protein product [Sordaria macrospora]
Length = 446
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 84/355 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE- 61
L+++ I V G A FLQ +IT ++ + LT QG+++ +I E
Sbjct: 63 LTKLTSRRLISVSGPDASKFLQGVITNNIDAPHNANGFYTGFLTAQGRVVHDVIIYPDEL 122
Query: 62 -----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQ-------- 106
+ +F++E+D ++ +L + YKLRS +++ + +WN
Sbjct: 123 GPEPGKRSFLIEVDANEAMTLHKHIKRYKLRSKFNLKLLDPEERALYHAWNDVDQSGPWS 182
Query: 107 ------EHTFSNSSFIDERFSIAD--VLLHRTWGHNEKIASDI---KTYHELRINHGIVD 155
+ + + D R V++++T + +D+ +YH R GI +
Sbjct: 183 KLIDEIQKDGNPRTVPDPRVPAFGSRVIVNQTSSSSSLTDNDLTPESSYHLRRFLLGIPE 242
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDL 213
++ + + P ++ MD++NGI KGCY+GQE+ R +HR ++RKR + +
Sbjct: 243 GQSEIISGSALPLESNMDVMNGIDFRKGCYVGQELTIRTKHRGVVRKRILPCILYSEGAA 302
Query: 214 P------------------------------PSGSPILTDDIEI----GTLGVVVGKKAL 239
P P G+ I D + G +G L
Sbjct: 303 PEIPADGPGQLEALEKLLKPEVDEGVKAEMIPQGASIDKVDKKSRSAPGKWLRGIGNVGL 362
Query: 240 AIARIDKVDHAI---------------------KKGMALTVHGVRVKASFPHWYK 273
A+ R++ + + +G + ++VKA P W K
Sbjct: 363 ALCRLEVMTDTVLPGETPGMYSPEQDFVVSLGGGEGSEVEAKKLKVKAFVPFWLK 417
>gi|302497401|ref|XP_003010701.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371]
gi|291174244|gb|EFE30061.1| hypothetical protein ARB_03403 [Arthroderma benhamiae CBS 112371]
Length = 409
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 74/347 (21%), Positives = 129/347 (37%), Gaps = 78/347 (22%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK- 59
+L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107
Query: 60 ------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103
E +++E+D+ + L+ +KLRS + +G +
Sbjct: 108 ETASSPTGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152
W++ F ++ I A + +R K+ S I+ Y R+ G
Sbjct: 168 WHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRRMLQG 227
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + +
Sbjct: 228 VGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYES 287
Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247
PPSG + G +G LA+ R++ +
Sbjct: 288 TKTLPTSDMPVYDPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNIGLAVCRLEIM 347
Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273
+ + G A +VKA P W K
Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394
>gi|71985951|ref|NP_492346.2| hypothetical protein F39H2.3 [Caenorhabditis elegans]
gi|54110900|emb|CAB03089.2| C. elegans protein F39H2.3, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|54110919|emb|CAB03184.2| C. elegans protein F39H2.3, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 280
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 14/270 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ +
Sbjct: 6 LIKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQTQNGLAAFLLNTKGRIVEDVLLWRRGT 65
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D LE + + L ++L Y+LR V I E + D RFS
Sbjct: 66 DDLFLECSKENKTILTKEILKYRLRKQVEITESSDQIFF----TEDVSDKQAHRDPRFSG 121
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ +E ++ + + Y LR + GI + + + + + P A DLLN +SL K
Sbjct: 122 FGARVFGNPSSSE-VSENREKYENLRRSAGIAEGSQEL--AELLPFQANGDLLNMVSLDK 178
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241
GCY+GQE+ +R H +IR+R + + G+ +L + ++G + + L I
Sbjct: 179 GCYVGQELTARTAHTGVIRRRILPFECEGQV-KIGAEVLDEKKNKVGKIISSDTTRCLGI 237
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
++ K LT GV + A P W
Sbjct: 238 LQLSSF-----KSQKLTADGVSLTAKQPEW 262
>gi|58696941|ref|ZP_00372437.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698833|ref|ZP_00373708.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698939|ref|ZP_00373799.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630247|ref|YP_002727038.1| aminomethyl transferase family protein [Wolbachia sp. wRi]
gi|58534541|gb|EAL58680.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534649|gb|EAL58773.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58536828|gb|EAL60046.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592228|gb|ACN95247.1| aminomethyl transferase family protein [Wolbachia sp. wRi]
Length = 268
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 8/269 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS----F 115
+ T +LE + +I+KL K V I ++ + V + +N + +S F
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLKVKIKDVSALYKVGVLFNTKLAECSSESQVIF 119
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R + + + E + D Y ++RI + + D D + ++ FP L+D +
Sbjct: 120 QDPRHKLLGMRIIHKDEIKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDKV 178
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV 234
NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L V
Sbjct: 179 NGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSSV 238
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVR 263
LA+ K + G V ++
Sbjct: 239 DNIGLALLNTGKSYANLYAGGVKCVKTLK 267
>gi|302652124|ref|XP_003017922.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517]
gi|291181507|gb|EFE37277.1| hypothetical protein TRV_08088 [Trichophyton verrucosum HKI 0517]
Length = 409
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 75/347 (21%), Positives = 131/347 (37%), Gaps = 78/347 (22%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60
+L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107
Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103
E E +++E+D+ + L+ +KLRS + +G +
Sbjct: 108 ETASSPAGEMEYLIELDKETSEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152
W++ F ++ I A + +R K+ S I+ Y R+ G
Sbjct: 168 WHESEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDETSIEAYTLRRMLRG 227
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + +
Sbjct: 228 VGEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYES 287
Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247
PPSG+ + G +G LA+ R++ +
Sbjct: 288 TKTLPTSDMPIYDPDTSITPPPSGAEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIM 347
Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273
+ + G A +VKA P W K
Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394
>gi|91205503|ref|YP_537858.1| glycine cleavage T-protein [Rickettsia bellii RML369-C]
gi|157827218|ref|YP_001496282.1| glycine cleavage T-protein [Rickettsia bellii OSU 85-389]
gi|91069047|gb|ABE04769.1| Glycine cleavage T-protein [Rickettsia bellii RML369-C]
gi|157802522|gb|ABV79245.1| Glycine cleavage T-protein [Rickettsia bellii OSU 85-389]
Length = 273
Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+N+ IK+ G ++ FLQ + T D+ Y + +L QG+ L F + +
Sbjct: 5 LNNREVIKIAGSDSLKFLQNLTTNDINKSNY---CYTYLLNNQGRYLFDFFVYVHNIEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++ID + +LID L FYK RS + I + + + + + S + D R+++
Sbjct: 62 YIDIDEKSKTALIDHLNFYKFRSKIEIVDCKDEYKIAYFHQELNMDSLVTARDPRYNLLG 121
Query: 125 VL-LHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ + + +I ++ Y + + N I+D D + P ++ L G+S
Sbjct: 122 FRSITLSQSCHSRIGGNLSKKLYLDDKYNFAIIDGVDDLIVGKSIPTLYGIEELKGVSYD 181
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ I +DL IL + IG + KA+
Sbjct: 182 KGCYVGQEVISRAKYQGVIRRKIYKIIAEEDLSSLIKDEEILAGNDSIGIICSSYQNKAI 241
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ + +K + K + V GV+V S WY
Sbjct: 242 ALVKEEK--YLASKEEDINVGGVKVDLSLAPWY 272
>gi|327298835|ref|XP_003234111.1| aminomethyl transferase [Trichophyton rubrum CBS 118892]
gi|326464289|gb|EGD89742.1| aminomethyl transferase [Trichophyton rubrum CBS 118892]
Length = 409
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/347 (21%), Positives = 130/347 (37%), Gaps = 78/347 (22%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60
+L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 HLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107
Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI----------NGVVLS 103
E E +++E+D+ + L+ +KLRS + +G +
Sbjct: 108 ETASSPAGEMEYLIELDKEASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDDGNTSA 167
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHG 152
W++ F ++ I A + +R K+ S I+ Y R+ G
Sbjct: 168 WHENEAFKENNAIVCPDGRAPGMGYRVIASGGKLPSRITEAFPGDESSIEAYTLRRMLRG 227
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + +
Sbjct: 228 VGEGQVEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYKS 287
Query: 213 L-------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARIDKV 247
PPSG+ + G +G LA+ R++ +
Sbjct: 288 TKTLPTSDMPVYDPDTSITPPPSGAEANISKAGASKGRSAGKFLNGIGNVGLAVCRLEIM 347
Query: 248 D---------------------HAIKKGMALTVHGVRVKASFPHWYK 273
+ + G A +VKA P W K
Sbjct: 348 TDIALTGESTQYDANQEFKITWDSTEVGGANIADQPKVKAFVPPWIK 394
>gi|326472590|gb|EGD96599.1| aminomethyl transferase [Trichophyton tonsurans CBS 112818]
Length = 408
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/346 (22%), Positives = 128/346 (36%), Gaps = 77/346 (22%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60
L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 RLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107
Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSW 104
E E +++E+D+ + L+ +KLRS + +G W
Sbjct: 108 ETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNTSGW 167
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHGI 153
++ F S+ I S A + +R +K+ S + Y R+ G+
Sbjct: 168 HENDVFKESNAIICPDSRAPGMGYRVIASGDKLPSRITEAFPGDETSFEAYTLRRMLQGV 227
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ + + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + +
Sbjct: 228 GEGQIEMPRESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYEST 287
Query: 214 -------------------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARID--- 245
PPSG + G +G LA+ R++
Sbjct: 288 QAPPTSDIPVYDPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMT 347
Query: 246 -----------KVDHAIKKGMALT-VHGV------RVKASFPHWYK 273
K T V G +VKA P W K
Sbjct: 348 DIALTGESTQYDAKQEFKITWDFTEVGGTNIADQPKVKAFVPPWIK 393
>gi|229586836|ref|YP_002845337.1| GcvT-like putative aminomethyltransferase [Rickettsia africae
ESF-5]
gi|228021886|gb|ACP53594.1| GcvT-like putative aminomethyltransferase [Rickettsia africae
ESF-5]
Length = 335
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 132/333 (39%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV--------------------------------LT 33
LSN+ IK+ G ++ FLQ +IT D+
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGKTMSNAVGESK 64
Query: 34 LPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
L + +L QG+ L F + + L+ID+S + +LI L FYK RS + +I
Sbjct: 65 LIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIKYLNFYKFRSKIQVI 124
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146
+ V+ S + S + D R++ + G I D +
Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWLS 184
Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R+ G I+D D + P+ + LN IS
Sbjct: 185 HRVTEGEPSSSKTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+
Sbjct: 245 KGCYVGQEVISRTKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|4586118|emb|CAB40954.1| putative protein [Arabidopsis thaliana]
gi|7267914|emb|CAB78256.1| putative protein [Arabidopsis thaliana]
Length = 363
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/307 (21%), Positives = 113/307 (36%), Gaps = 56/307 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY------------------KIARGSAI 44
+ L ++S ++ G + FLQ ++T DV +A+
Sbjct: 32 ASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYAAL 91
Query: 45 LTPQGKILLYFLIS---------------------KIEEDTFILEIDRSKRDSLIDKLLF 83
LTPQG+ L F + + ++D D L++ L
Sbjct: 92 LTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVELFADVDVDVLDELLETLKK 151
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y+LRS V IE + W + S D E +D
Sbjct: 152 YRLRSKVDIEN--VAEEFSCWQRYGRNLTGSSSVGWGGGVDRAAPLVEADKE---TDESN 206
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y R+ HG+ + + + P + LN IS KGCY+GQE+++R HR +IRKR
Sbjct: 207 YLLWRLEHGVAEGSAEIPKGEAIPLEYNFVGLNAISFDKGCYVGQELIARTHHRGVIRKR 266
Query: 204 PMIITGTDD-------LPPSGSPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKG 254
+ + D +G+ ++ ++GT+ +G + + + R V+ A K
Sbjct: 267 LIPLRFIDSNGKELNQKIAAGAEVVESGTGKKMGTVSTALGSRGMGVMR---VEEAFKPS 323
Query: 255 MALTVHG 261
L V
Sbjct: 324 AELAVKD 330
>gi|322707198|gb|EFY98777.1| aminomethyl transferase, putative [Metarhizium anisopliae ARSEF 23]
Length = 379
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 62/333 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISK 59
L ++ + V G A FLQ IITA++ LP A S L G+++ I
Sbjct: 39 LAALPSRQLLSVSGPEATKFLQGIITANMTNAEGLPRTDAFYSGFLNATGRVVHDIFIYP 98
Query: 60 ----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNS 113
++D +++E D + + YKLR+ V + P + V +W+ +
Sbjct: 99 FRQAKQDDGYLIEADAGEMARFAKLIKRYKLRAKVTVRNVPPDEASVWQAWDDASPLDIA 158
Query: 114 S------FIDERFSIADVLLHRTWGHNEKIASDI---KTYHELRINHGIVDPNTDFLPST 164
+ D R + + ++ D + Y R G+ + + L
Sbjct: 159 ASESRVVLKDPRAPGLGHRIVQLNHKAPELDVDASTEEAYTIRRYLQGVAEGQDEILREQ 218
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP------- 215
P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR + I D PP
Sbjct: 219 ALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCAIYSEDKAPPQTLSYDP 278
Query: 216 ---SGSPILTD--------------DIEIGTLGVVVGKKALAIARI----------DKVD 248
S + D G VG L + R+ ++
Sbjct: 279 ECASPESLTADMIPAETSIGRFGKKGRSAGKWLKGVGNIGLGLCRLEIMTDVVLPGEQAA 338
Query: 249 HAIKKGMALTVH--------GVRVKASFPHWYK 273
K G + V+VKA P W +
Sbjct: 339 ATYKPGNEFVLEWGDEDNKSDVKVKAFVPKWLR 371
>gi|322698390|gb|EFY90160.1| aminomethyl transferase, putative [Metarhizium acridum CQMa 102]
Length = 385
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/339 (22%), Positives = 126/339 (37%), Gaps = 68/339 (20%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT---LPYKIARGSAILTPQGKILLYFLISK 59
L ++ + V G A FLQ I+TA++ LP A S +L G+++ I
Sbjct: 39 LAALPSRQLLSVSGPEATKFLQGIVTANMTNAEGLPRTDAFYSGLLNATGRVVHDIFIYP 98
Query: 60 ----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQE 107
++D +++E D + L + YKLR+ V + P + V +W++
Sbjct: 99 FRQGGSGLQAKQDDGYLIEADAGEVARLAQLIKRYKLRAKVTVRNVPPDEASVWQAWDEA 158
Query: 108 HTFSNSS------FIDERFSIADVLLHRTWGHNEKIASDIK---TYHELRINHGIVDPNT 158
++ D R + + ++ D Y R HG+ +
Sbjct: 159 SPLEIAASESRVVLRDPRAPGLGYRIVQLSHKAPELDVDASTEDAYTIRRYLHGVAEGQD 218
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPP- 215
+ L P ++ M+L+NGI KGCY+GQE+ R +HR ++RKR + I G D PP
Sbjct: 219 EILREQALPLESNMELMNGIDFHKGCYVGQELTIRTRHRGVVRKRILPCVIYGEDKAPPQ 278
Query: 216 ---------SGSPILTD--------------DIEIGTLGVVVGKKALAIARI-------- 244
S + D G VG L + R+
Sbjct: 279 TLLYDPECASPESLTADMIPAETSIGRFGKKGRSAGKWLKGVGNIGLGLCRLEIMTDVVL 338
Query: 245 --DKVDHAIKKGMALTVH--------GVRVKASFPHWYK 273
++ K G + V+VKA P W +
Sbjct: 339 PGEQAAATYKPGDEFVLEWGNEDNKSDVKVKAFVPGWLR 377
>gi|302805709|ref|XP_002984605.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii]
gi|300147587|gb|EFJ14250.1| hypothetical protein SELMODRAFT_120802 [Selaginella moellendorffii]
Length = 404
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/352 (20%), Positives = 122/352 (34%), Gaps = 82/352 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44
+ +L +++ + G FLQ + T DVL L + I
Sbjct: 45 ASHLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGI 104
Query: 45 LTPQGKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKL 86
L PQG+ L + K +++ + ++D + D LI L Y L
Sbjct: 105 LNPQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYIL 164
Query: 87 RSNVIIEIQPINGVV--------------------LSWNQEHTFSNSS-----------F 115
RS V IE + + W S ++ F
Sbjct: 165 RSKVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGNGWRWF 224
Query: 116 IDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + G + D + Y R+ G+ + + P +
Sbjct: 225 KDPRLDALGFRGVFSSGITPPLIEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-------DDLPPSGSPILTD 223
M LN IS KGCY+GQE+++R +R IRKR M + + G+ I+
Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIVDG 344
Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH-GVRVKASFPHWY 272
++G++ +G + LA+ R++ K ++ G VK P W+
Sbjct: 345 ETGKKVGSVITALGSRGLAMVRLEAAAKDRLKLQSVDGGCGASVKPIRPKWW 396
>gi|42520194|ref|NP_966109.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42409932|gb|AAS14043.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 268
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114
+ T +LE + +I+KL K LR + ++ + V + +N + +S
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
F D R + + + E + D Y ++RI + + D D + ++ FP L+D
Sbjct: 119 FQDPRHKLLGMRIIHKDEMKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDK 177
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233
+NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L
Sbjct: 178 VNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSS 237
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
V A+ K + G V ++
Sbjct: 238 VDNIGFALLNTGKSHANLYAGGVKCVKTLK 267
>gi|259416996|ref|ZP_05740916.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B]
gi|259348435|gb|EEW60212.1| glycine cleavage T protein [Silicibacter sp. TrichCH4B]
Length = 248
Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++++ ++ G FLQ ++T D+ L + +AILTPQGK L F ++ E +
Sbjct: 1 MADRRIFRLHGPDTHSFLQGLVTNDINRLEDGL-VYTAILTPQGKYLADFFLAP-EGEAV 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L++ D L+ +L YKLR+NV I+ + + D R +
Sbjct: 59 LLDVADDLADDLLKRLKMYKLRANVTIDETDLK----VRRGTGEAPAGALTDPRHT---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G + D + +R+ H I + + P + + + LNG+ KGCY
Sbjct: 112 LGWRFYG--DVAGEDGSDWDAIRVAHVIPETGIELTPDSYI-LEVGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + +P G+ I +G + G KA+A R D
Sbjct: 169 VGQEVTARMKHKTELRKGLTQVEIDGAVP-VGAQITAAGKPVGQVLTQSGGKAIAYLRFD 227
Query: 246 KVDHAIKK-GMAL 257
+ A++ G AL
Sbjct: 228 RAKGALEAEGTAL 240
>gi|212533241|ref|XP_002146777.1| aminomethyl transferase, putative [Penicillium marneffei ATCC
18224]
gi|210072141|gb|EEA26230.1| aminomethyl transferase, putative [Penicillium marneffei ATCC
18224]
Length = 457
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 76/370 (20%), Positives = 131/370 (35%), Gaps = 99/370 (26%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFL 56
L+N+S I + G + FLQ +IT ++ + P +I SA L QG++L
Sbjct: 48 YARLTNRSLIAISGADSTSFLQGMITQNMLMGKEPVRAPRRIGTYSAFLNSQGRVLHDVF 107
Query: 57 ISKI------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVL 102
I I +E +++E+D+S+ +L+ L +KLR+ + + + V
Sbjct: 108 IYPITKGSLGHTNDSTDEAAWLIEVDKSEVTNLMKHLKKHKLRAKLTLRALEEGEQSVWA 167
Query: 103 SWNQEHTFSNSSF---------------------IDERFSIADVLLHRTWGHNEKI---- 137
+WN+ + ID R + ++
Sbjct: 168 AWNESAERPRWAAYNLESDFPSQLSDNESFVVGCIDTRAPGFGTRYVTPGAEDLQVHLSE 227
Query: 138 -------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
++TY RI HG+ + + + + P + MD+ I KGCY+GQE+
Sbjct: 228 ETKILGSEVGLETYKLRRILHGVAEGQQEIIRESSLPMECNMDVSQAIDFRKGCYVGQEL 287
Query: 191 VSRIQHRNIIRKRPMIITGTD---------------------DLPPSGSPI-----LTDD 224
R H ++RKR + + PP+G+ I
Sbjct: 288 TIRTHHTGVVRKRILPMQLYGIDENTLTSSASALIYDPSTDIPQPPTGANISQKASTRKG 347
Query: 225 IEIGTLGVVVGKKALAIARID--------------------KVDHAIKKGMALTVHG-VR 263
G L VG L + R++ +V + T G V+
Sbjct: 348 RSAGKLISGVGNVGLGLCRLEMMTDISLTGEGSKFNPLQEFQVTWDADPVVETTSSGAVK 407
Query: 264 VKASFPHWYK 273
VKA P W +
Sbjct: 408 VKAIVPSWLR 417
>gi|39977165|ref|XP_369970.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15]
gi|158514087|sp|A4R8F9|CAF17_MAGO7 RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|145016089|gb|EDK00579.1| hypothetical protein MGG_06485 [Magnaporthe oryzae 70-15]
Length = 389
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 122/327 (37%), Gaps = 60/327 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EE 62
L ++ I V G A +LQ ++TA+++ K +A L QG++L I +
Sbjct: 54 LKSRRLISVSGPDAAKYLQGVVTANIIN-NNKTGFYTAFLNAQGRVLHDVFIYPDASKDG 112
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSF----- 115
+ F++E+D ++ + L + YKLR+ + + + V +W+ +
Sbjct: 113 EGFLIEVDATEAERLTRHIKRYKLRAKLNLRLLDDGEATVWQAWDDSKADFAPAVGMTTP 172
Query: 116 -IDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHD 169
D R + + H + D+ +Y R G+ + T+ L P +
Sbjct: 173 VRDPRSPMLGYRVLTPGDHAQTPQLDLDPTPETSYRIRRYLQGVAEGQTEILREHALPAE 232
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP--------------- 214
+ MD+ I KGCY+GQE+ R +HR ++RKR + D
Sbjct: 233 SNMDVTGAIDFRKGCYVGQELTIRTRHRGVVRKRILPCVLYDHFAAPERLEYKHDGVVTA 292
Query: 215 ---PSGSPI---LTDDIEIGTLGVVVGKKALAIARID---------KVDHAIKKG----- 254
P + I G VG LA+ R++ + A++ G
Sbjct: 293 EGVPPETSIGRATKRGRSTGKWLSGVGNIGLALCRLEIMTDLTLPGEPAAALESGNDEFV 352
Query: 255 ------MALTVHGVR--VKASFPHWYK 273
+ G VKA P W +
Sbjct: 353 LTPKSDEDVGSEGAPFKVKAFVPDWLR 379
>gi|239946743|ref|ZP_04698496.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921019|gb|EER21043.1| glycine cleavage T-protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 308
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT + + +L QG+ L F + +
Sbjct: 5 LSNREVIKIIGLDSVKFLQNLITNYIKK---NNYCYTYLLNNQGRYLFDFFVYVPNLEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++
Sbjct: 62 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTMLG 121
Query: 125 VLLHRTWG---------------------------------------HNEKIASDIKTYH 145
+G + + + K Y
Sbjct: 122 FRSIYEFGVIPQLDRGIQKTIKQDWIPRSSRGMTRVESVHATIPPRESGDPASFNEKLYL 181
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
E + N I+D D + P+ + LN IS KGCY+GQEV+SR +++ +IR++
Sbjct: 182 EDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKIY 241
Query: 206 IITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
IT +DL IL D+ +IG + KA+A+ R +K + K +TV G++
Sbjct: 242 KITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALIREEK--YLADKEADITVKGIK 299
Query: 264 VKASFPHWY 272
+ S WY
Sbjct: 300 INLSLAPWY 308
>gi|241068687|ref|XP_002408509.1| glycine cleavage T protein, putative [Ixodes scapularis]
gi|215492497|gb|EEC02138.1| glycine cleavage T protein, putative [Ixodes scapularis]
Length = 256
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT + + +L QG+ L F + +
Sbjct: 10 LSNREVIKIIGLDSVKFLQNLITNYIKK---NNYCYTYLLNNQGRYLFDFFVYVPNLEEI 66
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L+ID+S + +L + L FYK RS + II+ V+ S + + + D R+++
Sbjct: 67 YLDIDKSNKAALTEHLNFYKFRSKIQIIDCSEEYKVIYSHQKLDIDTLVTSRDPRYTM-- 124
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L R+ + + + K Y E + N I+D D + P+ + LN IS KGC
Sbjct: 125 -LGFRSIYDGDPASFNEKLYLEDKYNFAIIDGVEDLITDKSIPNIYGAEELNAISFDKGC 183
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIA 242
Y+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+A+
Sbjct: 184 YVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNDKIGVICSSYRNKAIALI 243
Query: 243 RIDK 246
R +K
Sbjct: 244 REEK 247
>gi|168048459|ref|XP_001776684.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671976|gb|EDQ58520.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/349 (20%), Positives = 126/349 (36%), Gaps = 82/349 (23%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA-----------------RGSAILTPQ 48
L ++ I+ G + FLQ +IT DV + +A+L Q
Sbjct: 63 LKTRTVIRFDGPDVLNFLQGLITNDVKKFEDSPSGGTSPPSVNASILYHPPMYTAMLNSQ 122
Query: 49 GKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKLRSNV 90
G+ L + K + + ++D + L+ L + LR V
Sbjct: 123 GRFLYDLFLYKPNVEEEKLDRTGSGPGESRNAPVLLADVDSAVAVELVTYLKKHILRKKV 182
Query: 91 II-EIQPINGVV-----------------------LSWNQEHTFSNSSFI---------D 117
+ +I V ++ + S+S + D
Sbjct: 183 QVHDISEDLSVWQYYGGKLAEHPSNTTESEGGAIGYGGTKDESASSSVLVNDNQWRWYKD 242
Query: 118 ERFSIADVLL----HRTWGHNEKIASDIKTYHEL-RINHGIVDPNTDFLPSTIFPHDALM 172
R S + H E + Y+ L R+ G+ + +T+ P + +
Sbjct: 243 PRLSTLGLRGLFSKHTPPPLVEANTEVEEDYYLLWRLEQGVAEGSTEIPKGEAIPLEYNL 302
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------DLPPSGSPILTD-- 223
LN IS KGCY+GQE+V+R HR +IRKR M ++ TD G+ +L
Sbjct: 303 AGLNAISFDKGCYVGQELVARTHHRGVIRKRLMPLSFTDTNGKEAQAAVAVGAEVLDKRI 362
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++G + V+G +AL + R++ + H + VKA P W+
Sbjct: 363 GKKVGKVSTVLGPRALGMIRLESAREGNNQLCIENQHDILVKAVRPKWW 411
>gi|328773851|gb|EGF83888.1| hypothetical protein BATDEDRAFT_36379 [Batrachochytrium
dendrobatidis JAM81]
Length = 366
Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 125/332 (37%), Gaps = 62/332 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFLISKIE 61
L N+ +++ G A FLQ ++T + ++P + +A L QG++L+ I +
Sbjct: 29 YALLKNRMVLRLEGSDAAIFLQGLVTNHITDSMPENSLKLAAFLNAQGRVLMDAFIYREP 88
Query: 62 ED------TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSW------NQEH 108
++ +F++E + L L YKLR V I I V W ++
Sbjct: 89 KNPESTGPSFLVECADTVIPLLEKHLQRYKLRKQVKITNISDSVDVWQIWGSLDRDQLKN 148
Query: 109 TFSNSSFIDERFSIADVLLH-----RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ D R + + +T ++ Y RI GI + TDF
Sbjct: 149 SDGGMWCADPRNADMGMRGIALKTCQTLLPDQMKKVPFTDYVARRICLGIPEGPTDFFYE 208
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-------------- 209
P ++ ++L+ G+ KGCY+GQE+ R H RKR + +
Sbjct: 209 KSLPLESNLELIQGVDFQKGCYLGQELTIRTYHTGFTRKRIVPVQLYNEHDPVPKSLSLD 268
Query: 210 ---TDDLPPSGSPILTDDIE------------IGTLGVVVGKKALAIARIDKVDHAIKKG 254
T + PPS S I D+ +G + LA+ R++ V ++
Sbjct: 269 TSITMEHPPSQSDIKLGDLTSEETTLTRSKGVVGKYCGGLHNIGLALVRLESVVRPLENQ 328
Query: 255 MAL--------------TVHGVRVKASFPHWY 272
L +G+R +A P W+
Sbjct: 329 SMLGSSDLSSNEIKPLILANGMRARAFAPLWW 360
>gi|294678627|ref|YP_003579242.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003]
gi|294477447|gb|ADE86835.1| glycine cleavage T protein-2 [Rhodobacter capsulatus SB 1003]
Length = 247
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 13/248 (5%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G+ FLQ +++ D+ L +A+LTPQGK L F + E +L+
Sbjct: 2 RKIFDITGQDREHFLQGLVSNDLRRLAEGP-LYAALLTPQGKYLADFFLIARGE-AILLD 59
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
I+ + ++ + +L Y+LR++V I ++ + + D R L+
Sbjct: 60 IEAAIAEATVARLNMYRLRADVAIAPSALS----VFCGTGPAPEGALSDPRHPELGWRLY 115
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
++ LR+ H I + P T +A + L+G+ KGCY+GQ
Sbjct: 116 GDRDGDDGSDW-----DALRVAHLIPATGIELTPETYI-LEAGFERLHGVDFRKGCYVGQ 169
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
EV +R++H+ +RK + + + P G+PI +GTL G KALA R+D ++
Sbjct: 170 EVTARMKHKTELRKGLVQLAISGAAP-VGTPIGAGGKTVGTLYTQSGGKALAQLRLDALE 228
Query: 249 HAIKKGMA 256
++ G A
Sbjct: 229 GPMQAGEA 236
>gi|51473652|ref|YP_067409.1| hypothetical protein RT0451 [Rickettsia typhi str. Wilmington]
gi|51459964|gb|AAU03927.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 286
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 25/287 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ IK+ G ++ FLQ +IT D+ K + +L QG+ L F + ++
Sbjct: 5 LSNRKIIKIIGLDSLMFLQKLITNDICN---KRYCYTYLLNNQGRYLFDFFVYVHHKEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++ID+S + +LI L FYKLRS + II+ V+ S + + D R++
Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHQKLDIDMLITVRDPRYAKLG 121
Query: 125 VLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPSTIFP 167
++++K Y E + N I+D D + + P
Sbjct: 122 FRSINKLDIITCTSNNVKDMESISSITSYRQSMNPIYLEDKYNFAIIDGIEDLITNKSIP 181
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDI 225
+ + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL ++
Sbjct: 182 NMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKIYRITAYEDLLSLVQDDVILANNE 241
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+IG + K +A+ ++K H K +TV G+++ S WY
Sbjct: 242 KIGVICSSYQNKGIALI-MEKKYHDYKT-YNITVKGIKINLSLAPWY 286
>gi|315041995|ref|XP_003170374.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893]
gi|311345408|gb|EFR04611.1| hypothetical protein MGYG_07618 [Arthroderma gypseum CBS 118893]
Length = 407
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 75/344 (21%), Positives = 129/344 (37%), Gaps = 76/344 (22%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK-- 59
L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 49 LNNRSLISLSGVDSTGFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPFQ 108
Query: 60 -----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SWNQ 106
E +++E+D+ SL+ +KLRS + + +W++
Sbjct: 109 TANSAAGEMEYLIEVDKETSGSLLKHFKRHKLRSKLKFRALDEGERSVWSLWDDGNTWHE 168
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------DIKTYHELRINHGIVD 155
F ++ I A + +R +K+ S I+ Y RI G+ +
Sbjct: 169 NEAFKENNIIACPDGRAPGMGYRVIASGDKLPSRFIEAFPGDETSIQAYTLRRILQGVGE 228
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---D 212
+ + P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + D +
Sbjct: 229 GQAEMARESALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYDSTLE 288
Query: 213 LPPSGSPILTDD----------------------IEIGTLGVVVGKKALAIARIDKVD-- 248
P S +P+ D G +G LA+ R++ +
Sbjct: 289 PPTSDTPVYNPDTNITLPPFGIEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMTDI 348
Query: 249 -------------------HAIKKGMALTVHGVRVKASFPHWYK 273
+ + G +VKA P W K
Sbjct: 349 TLTGESTQYDPSQEFKITWDSSEVGSVQNADQPKVKAFVPSWIK 392
>gi|302793815|ref|XP_002978672.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii]
gi|300153481|gb|EFJ20119.1| hypothetical protein SELMODRAFT_177142 [Selaginella moellendorffii]
Length = 404
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/352 (20%), Positives = 121/352 (34%), Gaps = 82/352 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSAI 44
+ L +++ + G FLQ + T DVL L + I
Sbjct: 45 ASRLKSRAVLGFDGDDTFKFLQGLATNDVLQLEADEHSAKLGTPTPNQPGVVQPPIYTGI 104
Query: 45 LTPQGKILLYFLISKIEEDT------------------FILEIDRSKRDSLIDKLLFYKL 86
L PQG+ L + K +++ + ++D + D LI L Y L
Sbjct: 105 LNPQGRFLFDMFLYKPVQESEKLGKGGDAPGAGKSVPQLVADVDAASFDDLIAYLKRYIL 164
Query: 87 RSNVIIEIQPINGVV--------------------LSWNQEHTFSNSS-----------F 115
RS V IE + + W S ++ F
Sbjct: 165 RSKVNIEDLSKDLCAWQRFGGALAGSSTSETGAGNIGWAGGRDLSGTTAAEGNGKGWRWF 224
Query: 116 IDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + G + D + Y R+ G+ + + P +
Sbjct: 225 KDPRLDALGFRGVFSSGITPPLVEADQEVDEEYYLLWRLEQGVPEGPAEIPGGEAIPLEY 284
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-------DDLPPSGSPILTD 223
M LN IS KGCY+GQE+++R +R IRKR M + + G+ I+
Sbjct: 285 NMAALNAISFEKGCYVGQELIARTHYRGEIRKRLMPVNFVLENGEEMREGVARGTEIMDG 344
Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL-TVHGVRVKASFPHWY 272
++G++ +G + LA+ R++ K ++ G VK P W+
Sbjct: 345 ETGKKVGSVVTALGSRGLAMVRLEAAAKDRLKLQSVDGGGGAFVKPIRPKWW 396
>gi|238499867|ref|XP_002381168.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357]
gi|220692921|gb|EED49267.1| aminomethyl transferase, putative [Aspergillus flavus NRRL3357]
Length = 448
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/364 (20%), Positives = 130/364 (35%), Gaps = 93/364 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT D + +A L QG++L
Sbjct: 46 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 105
Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106
+ + +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 106 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 165
Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137
+++ ID R L + +
Sbjct: 166 HEQPRWAAYNLESSSSSPFSPSSSIAGCIDTRAPGFGSRLITPGAEDLRTHVPDETQIAG 225
Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H
Sbjct: 226 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 285
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232
++RKR + + D L +G+P+ E+ G
Sbjct: 286 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 345
Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269
VG LA+ R++ + A ++G + V+VKA P
Sbjct: 346 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 405
Query: 270 HWYK 273
W +
Sbjct: 406 SWTR 409
>gi|317150522|ref|XP_001824084.2| transferase caf17 [Aspergillus oryzae RIB40]
Length = 448
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/364 (19%), Positives = 130/364 (35%), Gaps = 93/364 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT D + +A L QG++L
Sbjct: 46 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 105
Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106
+ + +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 106 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 165
Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137
+++ ID R + + +
Sbjct: 166 HEQPRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAG 225
Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H
Sbjct: 226 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 285
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232
++RKR + + D L +G+P+ E+ G
Sbjct: 286 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 345
Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269
VG LA+ R++ + A ++G + V+VKA P
Sbjct: 346 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 405
Query: 270 HWYK 273
W +
Sbjct: 406 SWTR 409
>gi|121799784|sp|Q2U664|CAF17_ASPOR RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|83772823|dbj|BAE62951.1| unnamed protein product [Aspergillus oryzae]
Length = 447
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/364 (19%), Positives = 130/364 (35%), Gaps = 93/364 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT D + +A L QG++L
Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLITNDQNRATRQTGSYTAFLNSQGRVLNDAF 104
Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106
+ + +E +++E+DR++ SL+ L +KLR+ + + V SW
Sbjct: 105 LYPLPQADLTSPDEPAWLIEVDRNEVASLMKHLKKHKLRAKLKLRALEDGERTVWASWKD 164
Query: 107 EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---------- 137
+++ ID R + + +
Sbjct: 165 HEQPRWAAYNLESPSSSPFSPSSSIAGCIDTRAPGFGSRIITPGAEDLRTHVPDETQIAG 224
Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ Y R+ HGI + ++ + + P + MD++ GI KGCY+GQE+ R H
Sbjct: 225 SEVSLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMMKGIDFRKGCYVGQELTIRTHH 284
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEI--------------------GTLGV 232
++RKR + + D L +G+P+ E+ G
Sbjct: 285 TGVVRKRILPVQLYTGDQDALESAGAPVYDPTAELPLPPSAANMYKISARRARSTGKFLG 344
Query: 233 VVGKKALAIARIDKVD---------------------HAIKKGMALTV--HGVRVKASFP 269
VG LA+ R++ + A ++G + V+VKA P
Sbjct: 345 GVGNIGLALCRLEMMTDVTLTGERTQYSPEQEFKVSWDAAEEGSSEHQEPGEVKVKAFVP 404
Query: 270 HWYK 273
W +
Sbjct: 405 SWTR 408
>gi|157964644|ref|YP_001499468.1| putative aminomethyltransferase [Rickettsia massiliae MTU5]
gi|157844420|gb|ABV84921.1| Putative aminomethyltransferase [Rickettsia massiliae MTU5]
Length = 338
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP------------------------------ 35
LSN+ IK+ G ++ FLQ +IT D+
Sbjct: 8 LSNREVIKIIGFDSVKFLQNLITNDICKSNSVEFGYKEQGAKPIIIGETTSNAVGESKSI 67
Query: 36 YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+
Sbjct: 68 DYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVIDC 127
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIA--------DVLLHRTWGHNEKIASDIKTYHE 146
V+ S + S + D R++ DV+ G + I D +
Sbjct: 128 SDEYKVIYSLQKLDINSLITVRDPRYAKLGFRSINKLDVIPWLDRGIQKIIKKDWTPWSS 187
Query: 147 L-------------------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ N I+D D + P+ + LN IS
Sbjct: 188 HGVTEGAPPPSTTSPSESGNLIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 247
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+
Sbjct: 248 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 307
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 308 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 338
>gi|34581578|ref|ZP_00143058.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262963|gb|EAA26467.1| unknown [Rickettsia sibirica 246]
Length = 335
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38
LSN+ IK+ G ++ FLQ +IT D V ++ +
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64
Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I
Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146
+ V+ S + S + D R++ + G I D +
Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSS 184
Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R+ G I+D D + P+ + LN IS
Sbjct: 185 HRVTEGESPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+
Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|308498249|ref|XP_003111311.1| hypothetical protein CRE_03852 [Caenorhabditis remanei]
gi|308240859|gb|EFO84811.1| hypothetical protein CRE_03852 [Caenorhabditis remanei]
Length = 280
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 14/270 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L ++ +K+ G FLQ +IT DV L + + +L +G+I+ L+ +
Sbjct: 6 LIKLPHRVLLKLHGADTNVFLQGLITNDVTKLQSQNGLAAFLLNTKGRIVEDVLLWRRGT 65
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ LE + +D L+ +++ Y+LR V I + +++ D RF+
Sbjct: 66 EDVFLECSKVNQDVLVKEIVKYRLRKRVEISETSDQ----VFFEQNPSDKHEHRDPRFAG 121
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ +E I+ + + Y LR + GI + + + + P A DLLN +SL K
Sbjct: 122 FGARIFGNPPSSE-ISENREAYENLRRSTGIAEGADEL--ADLLPFQANGDLLNMVSLDK 178
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAI 241
GCYIGQE+ +R H +IR+R + + G+ IL + ++G + + L I
Sbjct: 179 GCYIGQELTARTAHTGVIRRRILPFECEGQV-KIGADILDEKKNKVGKVISSDTTRCLGI 237
Query: 242 ARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
++ K LT V + A P W
Sbjct: 238 LQLSSF-----KSSKLTADEVSLTAKQPEW 262
>gi|296422045|ref|XP_002840573.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636792|emb|CAZ84764.1| unnamed protein product [Tuber melanosporum]
Length = 388
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 71/331 (21%), Positives = 115/331 (34%), Gaps = 68/331 (20%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--------- 59
+ I++ G+ A +LQ + T D+ + SA L QGK+L I
Sbjct: 38 RQLIEIHGRDAPKYLQGLTTGDIPMQSDSLGTYSAFLNAQGKVLYDIFIYPTNRNHRWRA 97
Query: 60 --------------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--I 97
++E F +E D D+L++ + YKL S + P
Sbjct: 98 QIEQKNFQPPGCPPTKKGPEVDEPGFFIECDIRSADALLNHIRRYKLSSKFHSRLIPKGE 157
Query: 98 NGVVLSWNQEHTFSNS----SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ W+ S D R + G N + D++ Y+ R+ HG+
Sbjct: 158 WDMWAIWDDHRLLPTSLGEIGCTDTRAPNLGKRVAVFGGKNIGVEVDVEVYNVRRMLHGV 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ + L ++ MD + G+ KGCY+GQE+ R H ++RKR + +
Sbjct: 218 PEGQNEILNGGNIAQESNMDYMGGVDFRKGCYVGQELTIRTHHTGVVRKRVLPVQLFRPE 277
Query: 214 PPSGSPILTD----------------------DIEIGTLGVVVGKKALAIARID------ 245
P + D G VG LA+ R++
Sbjct: 278 DPVPEKLTYDPNLDLAPLLPGETLNISKLEESGRSAGKFLRGVGNIGLALCRLEIMTDLE 337
Query: 246 ---KVDHAIKKGMALTVHG--VRVKASFPHW 271
K + L V G +RVKA P W
Sbjct: 338 NGRKREGKTVPEFKLDVEGSELRVKAFVPEW 368
>gi|67906657|gb|AAY82747.1| predicted aminomethyltransferase [uncultured bacterium
eBACmed18B02]
Length = 296
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 27/289 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ + + G A+ FLQ +I+ D+ + + +++L+PQGK L F+I K + +
Sbjct: 9 LKDRAILYINGDDAVSFLQNLISNDINKVSETYSCFASLLSPQGKFLYEFIIVK-HKSGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--------- 114
+++ ++S+ D L +L YKLRS V I VV +++ E TF +
Sbjct: 68 LIDCEKSQVDELYKQLSVYKLRSKVEILNLSNEFVVAAFSYEKFLTFDEAKKVPGFTLKF 127
Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
F+D R L + + E +DI Y+ L GIV N + L
Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLELHDADINEYYSLSHKLGIVPKNLNQLQ 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+ F + D LNGI KGCY+GQE +RI+ +N + KR + I D G I
Sbjct: 188 NKAFGIECNYDELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIDIIDGKLHEGEGIFN 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ EIG + + + A+ + +D + +K P W
Sbjct: 248 KENEIGKVL-INNEYPFALIKF--LDKNFDENAEFKTKEASIKIKKPEW 293
>gi|121713844|ref|XP_001274533.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1]
gi|158512623|sp|A1CBI9|CAF17_ASPCL RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|119402686|gb|EAW13107.1| aminomethyl transferase, putative [Aspergillus clavatus NRRL 1]
Length = 450
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/366 (19%), Positives = 128/366 (34%), Gaps = 95/366 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT ++L +A L QG++L
Sbjct: 45 YARLTNRGLISITGIDSTTFLQGLITQNMLVANDPNRAIRRTGTYAAFLNSQGRVLNDAF 104
Query: 57 ISKI----------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104
I + E+ +++E+D+ + SL+ L +KLRS + + V SW
Sbjct: 105 IYPMPRVDGGAAAPEDPAWLVEVDKCEVSSLMKHLKKHKLRSKLKLRALEDGERTVWSSW 164
Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137
+++ +D R + G + ++
Sbjct: 165 KDHTEPRWAAYNLESESSSQFSPSSPIAGCVDTRAPGFGSRIVTPGGEDLRMHFPDEAQV 224
Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
D+ Y R+ HGI + ++ + + P + MD+ G+ KGCY+GQE+ R
Sbjct: 225 AGGEVDLGAYTVRRMLHGIAEGQSEIIRESALPLECNMDMARGVDFRKGCYVGQELTIRT 284
Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230
H ++RKR + + + PPSG+ I G
Sbjct: 285 HHTGVVRKRIVPVQLYTGAQDTVPVDGLPAYDSSVEVPSPPSGTNISKVGARKGRSAGKF 344
Query: 231 GVVVGKKALAIARIDKVDH---------------------AIKKGM--ALTVHGVRVKAS 267
VG LA+ R++ + A +G V++KA
Sbjct: 345 LGGVGNIGLALCRLEMMTDIVLTSEGTQYNPETEFKVSWTAADEGPVGPSDSGEVKIKAF 404
Query: 268 FPHWYK 273
P W +
Sbjct: 405 VPPWLR 410
>gi|238650862|ref|YP_002916717.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic]
gi|238624960|gb|ACR47666.1| hypothetical protein RPR_05365 [Rickettsia peacockii str. Rustic]
Length = 335
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38
LSN+ IK+ G ++ FLQ +IT D V ++ +
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64
Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I
Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146
+ V+ S + S + D R++ + G I D ++
Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWISWSS 184
Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R+ G I+D D + P+ + LN IS
Sbjct: 185 HRVTEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL IL D+ +IG + KA+
Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNKIGVICSSYHNKAI 304
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|222475546|ref|YP_002563963.1| hypothetical protein AMF_881 [Anaplasma marginale str. Florida]
gi|254995349|ref|ZP_05277539.1| hypothetical protein AmarM_05374 [Anaplasma marginale str.
Mississippi]
gi|255003537|ref|ZP_05278501.1| hypothetical protein AmarPR_04834 [Anaplasma marginale str. Puerto
Rico]
gi|255004662|ref|ZP_05279463.1| hypothetical protein AmarV_05199 [Anaplasma marginale str.
Virginia]
gi|222419684|gb|ACM49707.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 271
Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 15/275 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++S ++V G A FL I T DVL + + + IL P+G+ + F +
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIPH 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
E++ F+L+ + D+L + L Y+L+ V ++ V N++
Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDEYAVAVHPNTVDSGNAANFEDAI 119
Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
F D R + + T ++ Y LRI I + D + + FP
Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
MD LN ISL KGCYIGQE+V+R+ +K+ + G I G +
Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTKTLVCGQEIFAQGQPAGHML 238
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ L + ++K+ G L G +K
Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269
>gi|15892621|ref|NP_360335.1| hypothetical protein RC0698 [Rickettsia conorii str. Malish 7]
gi|15619789|gb|AAL03236.1| unknown [Rickettsia conorii str. Malish 7]
Length = 334
Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 67/332 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38
LSN+ IK+ G ++ FLQ +IT D V ++ +
Sbjct: 5 LSNRDVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIGETTSNAVGESKS 64
Query: 39 ----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIE 93
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I+
Sbjct: 65 IDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVID 124
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHEL 147
V+ S + S + D R++ + G I D +
Sbjct: 125 CSNEYKVIYSLQKLDIESLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWTPWSSH 184
Query: 148 RINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
R+ G I+D D + P+ + LN IS K
Sbjct: 185 RVTEGEPPPSTTSPCENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDK 244
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALA 240
GCY+GQEV+SR +++ +IR++ IT +DL IL D+ IG + KA+A
Sbjct: 245 GCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDEEILADNNTIGVICSSYHNKAIA 304
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ R +K + K +TV G+++ S WY
Sbjct: 305 LIREEK--YLADKEADVTVKGIKINLSLAPWY 334
>gi|218197511|gb|EEC79938.1| hypothetical protein OsI_21522 [Oryza sativa Indica Group]
Length = 401
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 98/365 (26%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---------------ILTP 47
+ L++++ ++ G A FL++++T D+L R + +LTP
Sbjct: 25 ACRLTSRAVVRFAGPEAGRFLRSLLTNDLLLSSSTQQRYAPTPNAPARAPPPAYAALLTP 84
Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77
QG+ L + + + +L+ +D ++ D L
Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144
Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNS 113
+ Y+LRS V I+ Q + W Q +H ++
Sbjct: 145 LACFKRYRLRSKVEIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAESA 204
Query: 114 S---------FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159
+ F D R + +D + Y RI +G+ + +T+
Sbjct: 205 AQGNGHGWEWFKDPRLDCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVAEGSTE 264
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212
P + LN IS KGCYIGQE+++R HR +IRKR M + D+
Sbjct: 265 IPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQ 324
Query: 213 LPPSGSPILT--DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKAS 267
GS ++ +IGT+ +G + + + R++ A+K+ +L + VRVKA
Sbjct: 325 AVAPGSEVVDKESGKKIGTVNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAI 381
Query: 268 FPHWY 272
P W+
Sbjct: 382 KPDWW 386
>gi|67906639|gb|AAY82733.1| hypothetical protein [uncultured bacterium eBACmed86H08]
Length = 295
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 27/289 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ + + G + +LQ +I+ D+ + + +++L+PQGK L FL+ K +D +
Sbjct: 9 LDDRAILYINGPDSDKYLQNLISNDIEKVNENKSCFASLLSPQGKFLFDFLVLK-HKDGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L+ ++ D L KL+ YKLRS V I VV +++ + S DE
Sbjct: 68 FLDCEKKIVDQLYKKLVMYKLRSKVEILNLSNEFVVAAFSYDKFLSIEGAKDELGYTFKH 127
Query: 120 -------FSIADVLLHRTWGHNEKI----------ASDIKTYHELRINHGIVDPNTDFLP 162
L R + EK+ +S I YH+L GI N D L
Sbjct: 128 NEDHVLLDPRNKKLGGRIIANLEKLYMSLKKMKLKSSKIDEYHKLSFELGIPQSNMDQLQ 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+F + LN I KGCY+GQE SRI++++ + KR + + + PI++
Sbjct: 188 EKLFGIECNFVELNAIDFKKGCYVGQENTSRIKNKDKLNKRLLPLQVKKGSISNNDPIIS 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+++EIG + + + A+ + + + ++ P+W
Sbjct: 248 NNVEIGKVL-IANTFSFALIKFK--NKEFEYNKEFKCGEANIEILKPNW 293
>gi|114798165|ref|YP_759588.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444]
gi|114738339|gb|ABI76464.1| putative aminomethyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 271
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L +++ + + G I L+ +T V AR A+LTPQGKI+ ++ +I D
Sbjct: 3 RLPDRAILSLTGPDTIALLERTVTHTVAGWAEGEARYGALLTPQGKIIADYIAHRIA-DG 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++++ D L+ +L ++LRS V I + S D R
Sbjct: 62 VLIDVHEDAADDLMKRLKMFRLRSAVEIMRDEALVSAIDV--------SGVPDPRTPK-- 111
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L HR+ A + + L I+ G+ + D+ + +FP D MD++ GI KGC
Sbjct: 112 -LPHRSIVPAGDAAEPLPGWDALAISAGVPEWGRDYRAAEVFPTDINMDVMTGIDYRKGC 170
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKALAIAR 243
++GQEV SR++ + +IRKR + + G + G+ + +GT+ +ALA+ R
Sbjct: 171 FVGQEVASRMKRKGLIRKRTVRLKGEGLVV--GAELRAGTAGSLGTVTSAAAGEALALIR 228
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPHW 271
D+ AI+ +TV+ + W
Sbjct: 229 TDRFAKAIQDKQPVTVNDAPAEIDGAPW 256
>gi|302803303|ref|XP_002983405.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii]
gi|300149090|gb|EFJ15747.1| hypothetical protein SELMODRAFT_118206 [Selaginella moellendorffii]
Length = 406
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 67/347 (19%), Positives = 119/347 (34%), Gaps = 79/347 (22%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-----------------GSAIL 45
+ LS+++ I G+ I FLQ + T ++ L +AIL
Sbjct: 57 ACKLSSRAVIGFEGEDVIKFLQGLTTNNMNKLEQDSPTRLPHPTLNQPAVVQPPLYTAIL 116
Query: 46 TPQGKILLYFLISKI------------------EEDTFILEIDRSKRDSLIDKLLFYKLR 87
PQG+ L ++ K + ++D L L +KLR
Sbjct: 117 NPQGRFLFDMVVFKPVQSTEKLDRSGTGPGSEKSAPKLVADVDAESVSDLFAHLTRHKLR 176
Query: 88 SNVIIEIQPINGVV-----------------LSWNQEHTFSNSSFI-----------DER 119
+ + V + W + ++ D R
Sbjct: 177 AKISFSDMSKELAVWQRFGGALECEGDNEGSVGWGAGRDVAGNTSASSNVQGWRWHKDPR 236
Query: 120 FSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ D + Y R+ GI + + P + ++
Sbjct: 237 TGCLGFRGIFPVESTPPLIDADQEVDEQYYLLWRLEQGIPEGPAEIRGGEAIPLEYNLEG 296
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------DLPPSGSPILTDD--I 225
LN I KGCY+GQE+V+R HR +IRKR M + D + G+ I+ +
Sbjct: 297 LNAIDFDKGCYVGQELVARTHHRGVIRKRVMPVIFLDKDGEEISEAVSHGAEIVDAESSK 356
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++GT+ +G + A+ R++ V + G + ++VK P W+
Sbjct: 357 KMGTVTTALGSRGFALVRLEAVSKRLSIGGGMA--SIQVKVLRPKWW 401
>gi|56417181|ref|YP_154255.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries]
gi|56388413|gb|AAV87000.1| hypothetical protein AM1168 [Anaplasma marginale str. St. Maries]
Length = 271
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 15/275 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++S ++V G A FL I T DVL + + + IL P+G+ + F +
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAQEPIYNLILNPRGRYVFDFFLIPH 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
E++ F+L+ + D+L + L Y+L+ V ++ V N++
Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDAI 119
Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
F D R + + T ++ Y LRI I + D + + FP
Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
MD LN ISL KGCYIGQE+V+R+ +K+ + + G I G +
Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTNTLVCGQEISAQGQPAGHML 238
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ L + ++K+ G L G +K
Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269
>gi|165933349|ref|YP_001650138.1| aminomethyltransferase family protein [Rickettsia rickettsii str.
Iowa]
gi|165908436|gb|ABY72732.1| aminomethyltransferase family protein [Rickettsia rickettsii str.
Iowa]
Length = 335
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38
LSN+ IK+ G ++ FLQ +IT D V ++ +
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64
Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I
Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146
+ V+ S + S + D R++ + G I D +
Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWSS 184
Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R+ G I+D D + P+ + LN IS
Sbjct: 185 HRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IRK+ IT +DL + IL D+ +IG + KA+
Sbjct: 245 KGCYVGQEVISRAKYQGVIRKKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKAI 304
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|148284975|ref|YP_001249065.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str.
Boryong]
gi|146740414|emb|CAM80888.1| gcvT-like aminomethyltransferase [Orientia tsutsugamushi str.
Boryong]
Length = 288
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 18/287 (6%)
Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
M S +L +N++ +++ G A FL I T V+ A+ S IL+PQG+ L F +
Sbjct: 1 MHSYHLLNNRAILELSGCDASNFLLRITTN-VIPAANGEAKYSMILSPQGRFLFDFFLIN 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSN 112
+TF ++ S +++L+ KL +KLRS V I ++ V+ S N H N
Sbjct: 60 -NHNTFFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLN 118
Query: 113 SS-----FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
++ + D RF+ LL + S+ Y + I D D +
Sbjct: 119 TAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAI 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224
P + D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +PI+ +
Sbjct: 179 PPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNS 238
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IG + +A+ R + I +TV ++K S P W
Sbjct: 239 NIIGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285
>gi|269958426|ref|YP_003328213.1| aminomethyl transferase family protein [Anaplasma centrale str.
Israel]
gi|269848255|gb|ACZ48899.1| aminomethyl transferase family protein [Anaplasma centrale str.
Israel]
Length = 271
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 15/275 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++S ++V G A FL I T DVL + + + IL P+G+ + F +
Sbjct: 1 MKLFRLHDRSVLRVYGPDAGKFLHGITTNDVLGIGAREPIYNLILNPRGRYVFDFFLIPH 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
E++ F+L+ + D+L + L Y+L+ V ++ V N++
Sbjct: 61 EQN-FLLDCASADADALTELLRSYRLQLKVRVKRCDDECAVAVHPNTVDSGNAANFEDAI 119
Query: 115 -FIDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
F D R + + T ++ Y LRI I + D + + FP
Sbjct: 120 LFQDPRDPKMWMRAIVPTTASITCDELPNLNEYELLRIKCTIPNCVLDMVRNESFPLHFA 179
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
MD LN ISL KGCYIGQE+V+R+ +K+ + G I G +
Sbjct: 180 MDRLNAISLNKGCYIGQEIVARMWRIG-AKKKLYTVFSDTKTLVCGQEIFAQGQPAGHML 238
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ L + ++K+ G L G +K
Sbjct: 239 STLEGWGLCLLEVEKIAD----GCNLESGGTHLKI 269
>gi|157828633|ref|YP_001494875.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801114|gb|ABV76367.1| hypothetical protein A1G_04315 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 335
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD-----VLTLPYKI---------------------- 38
LSN+ IK+ G ++ FLQ +IT D V ++ +
Sbjct: 5 LSNREVIKIIGFDSVKFLQNLITNDICKSIVNSVEFGYKERGAKPIIIGETTSNAVGESK 64
Query: 39 -----ARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV-II 92
+ +L QG+ L F + + L+ID+S + +LI+ L FYK RS + +I
Sbjct: 65 SIDYNYCYTYLLNNQGRYLFDFFVYVHNPEEIYLDIDKSNKAALIEYLNFYKFRSKIQVI 124
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL------LHRTWGHNEKIASDIKTYHE 146
+ V+ S + S + D R++ + G I D +
Sbjct: 125 DCSNEYKVIYSLQKLDIDSLITVRDPRYAKLGFRSINKLDVIPLCGIQTIIKKDWIPWSS 184
Query: 147 LRINHG-------------------------IVDPNTDFLPSTIFPHDALMDLLNGISLT 181
R+ G I+D D + P+ + LN IS
Sbjct: 185 HRVIEGEPPPSTTSPRENGNPIYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFD 244
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV+SR +++ +IR++ IT +DL + IL D+ +IG + KA+
Sbjct: 245 KGCYVGQEVISRAKYQGVIRRKIYKITADEDLSSLVKDAEILADNNKIGVICSSYHNKAI 304
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A+ R +K + K +TV G+++ S WY
Sbjct: 305 ALIREEK--YLADKEADVTVKGIKINLSLAPWY 335
>gi|115466238|ref|NP_001056718.1| Os06g0134800 [Oryza sativa Japonica Group]
gi|55296974|dbj|BAD68449.1| glycine cleavage T protein-like [Oryza sativa Japonica Group]
gi|55297200|dbj|BAD68874.1| glycine cleavage T protein-like [Oryza sativa Japonica Group]
gi|113594758|dbj|BAF18632.1| Os06g0134800 [Oryza sativa Japonica Group]
gi|215686575|dbj|BAG88828.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 401
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 98/365 (26%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSA---------------ILTP 47
+ L++++ ++ G A FL++++T D+L R + +LTP
Sbjct: 25 ACRLASRAVVRFAGPEAGRFLRSLLTNDLLLSSSSQQRYAPTPNAPARAPPPAYAALLTP 84
Query: 48 QGKILLYFLISKIEEDTFILE------------------------------IDRSKRDSL 77
QG+ L + + + +L+ +D ++ D L
Sbjct: 85 QGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVDAAEVDEL 144
Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNS 113
+ Y+LRS V I+ Q + W Q +H ++
Sbjct: 145 LACFKRYRLRSKVEIDNVSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQGVDHAAESA 204
Query: 114 S---------FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159
+ F D R + +D + Y RI +G+ + +T+
Sbjct: 205 AQGNGHGWEWFKDPRLDCLGYRGIFPANTIPPLVESDKEADERHYLLWRIENGVAEGSTE 264
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212
P + LN IS KGCYIGQE+++R HR +IRKR M + D+
Sbjct: 265 IPKGEAIPLEYNFAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQ 324
Query: 213 LPPSGSPILT--DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKAS 267
GS ++ +IGT+ +G + + + R++ A+K+ +L + VRVKA
Sbjct: 325 AVAPGSEVVDKESGKKIGTVNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAI 381
Query: 268 FPHWY 272
P W+
Sbjct: 382 KPDWW 386
>gi|71083326|ref|YP_266045.1| GcvT-like aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062439|gb|AAZ21442.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
Length = 295
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 27/289 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K + +
Sbjct: 9 LEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIK-HKSGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111
++ ++S+ ++L +L YKLRS V I VV ++N+E
Sbjct: 68 FIDCEKSQTEALFKQLSVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAGNTIKY 127
Query: 112 --NSSFIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
+S +D R L + + E S I Y++L GI N + L
Sbjct: 128 REDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPIAEYYKLSHQLGIPQKNMNELQ 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+ +F + + LNGI KGCY+GQE +RI+ +N + KR + I + I
Sbjct: 188 NKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQDDLIYN 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
D EIG + + + A+ I +D + ++K P W
Sbjct: 248 GDFEIGKVL-ISNEYPFAL--IKYLDDNFNQENEFKSKNAKLKIKIPSW 293
>gi|91776256|ref|YP_546012.1| glycine cleavage T protein (aminomethyl transferase)
[Methylobacillus flagellatus KT]
gi|91710243|gb|ABE50171.1| glycine cleavage T protein (aminomethyl transferase)
[Methylobacillus flagellatus KT]
Length = 334
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 38/283 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ + + G+ A+ FLQ +T DV L I+ S +P+G++L FL ++
Sbjct: 34 ADLSHYGLLSLEGEDAVTFLQGQVTNDVKKLDGNISHYSGYCSPKGRLLALFLAF-AQDG 92
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLSWNQEHTFSNSSFIDE- 118
L+ DR + + +L Y LRS V+I + + G+ + + + S I E
Sbjct: 93 RLYLQFDRGLLEPIAKRLRMYVLRSKVVIADRSDDTVRIGIAGNAAEAALNTRFSHIPET 152
Query: 119 ---RFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGIV 154
+ S +++ R G + + +D + I GI
Sbjct: 153 EYAQVSQDGIIIIRLPGTLPRYELLSPAAQAAELWTALREHLVPADKADWDWREIQAGIP 212
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213
+ P +DLLNGIS KGCY GQE+V+R + +++R + D
Sbjct: 213 EIVG-ATQEAFVPQMVNLDLLNGISFKKGCYTGQEIVARTHYLGKVKRRTHLAHIAVDAA 271
Query: 214 PPSGSPIL-TDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
P +G I+ D I G + G+ LA R++ V+
Sbjct: 272 PAAGEEIVDADGIAAGQIVRSAPNPTGGQDVLAELRLESVEAG 314
>gi|261330733|emb|CBH13718.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 339
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 54/323 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--- 60
LS+++ ++V G A FLQ + T D+ L + L G+++ + +
Sbjct: 5 CLLSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRT 64
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------- 103
+ T ++++ D+L++ L Y++R + I VV++
Sbjct: 65 PEGQATIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDSA 124
Query: 104 ------------WNQEHTFSNS---------SFIDERFSIADVLLHRTWGH---NEKIAS 139
+QE + +F D R L +
Sbjct: 125 GSSPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLD 184
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R +
Sbjct: 185 SEKLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLV 244
Query: 200 IRKRPMIITGTDDL---------PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250
RKR + + +L P ++ + ++G + G L + R++ VD
Sbjct: 245 TRKRTVPLFLQGELFDGKEGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDIT 304
Query: 251 IKKGMALTV-HGVRVKASFPHWY 272
+ L++ G V A P W+
Sbjct: 305 TRSFPGLSLSDGTTVDARIPEWW 327
>gi|73541126|ref|YP_295646.1| glycine cleavage T protein (aminomethyl transferase) [Ralstonia
eutropha JMP134]
gi|72118539|gb|AAZ60802.1| Glycine cleavage T protein (aminomethyl transferase) [Ralstonia
eutropha JMP134]
Length = 373
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/317 (21%), Positives = 117/317 (36%), Gaps = 54/317 (17%)
Query: 6 LSNQSF---------IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56
L N+ I+V G A FL +T V L AR + +P+G++ FL
Sbjct: 53 LQNRGVVCAPAGLGWIRVAGDDAAAFLHTQLTNAVEDLGPGAARLAGYCSPKGRLQASFL 112
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVV-------------L 102
+ + + D +L++ + +L +L + LR+ + P+ VV
Sbjct: 113 MWR-DADGIVLQLSDDIQPALQKRLSMFVLRAKAKLSDMSPVVAVVGAAGPQAAQALAKA 171
Query: 103 SWNQEHTFSNSSFIDE----RFSIADVLLH-------------RTWGHNEKIASDIKTYH 145
++ ++ R A R E +D +
Sbjct: 172 GLPAPDAVFGTASVESATVIRLPDAAGQPRWQAVLPAERAGEFRAALSGELADADSAFWD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
L + GI T P +L+ G++ KGCY GQE+V+R Q+R +++R
Sbjct: 232 WLDVQSGIPRIVT-ATQEQFVPQMINFELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMW 290
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----K 253
++ G +P + I + G+VV G LA +ID A+ +
Sbjct: 291 LVQGDGAVPAPATEIFRPEDPQQPCGMVVNAAPAPQGGWAGLAELKIDAAASALHLGSAE 350
Query: 254 GMALTVHGVRVKASFPH 270
G ALTV + + P
Sbjct: 351 GAALTVGELPYEVPLPE 367
>gi|326483599|gb|EGE07609.1| hypothetical protein TEQG_06523 [Trichophyton equinum CBS 127.97]
Length = 395
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 78/335 (23%), Positives = 125/335 (37%), Gaps = 68/335 (20%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKI 60
L+N+S I + G + FLQ +IT ++ + P +A L QG+IL I
Sbjct: 48 RLNNRSLISISGIDSTSFLQGLITRNLSVPKNSPPVTSPFYAAFLNSQGRILNDVFIYPF 107
Query: 61 E-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------NGVVLSW 104
E E +++E+D+ + L+ +KLRS + +G W
Sbjct: 108 ETVNSPAGEMEYLIELDKGASEGLLKHFRRHKLRSKLKFRALDDGERSVWSIWDGNTSDW 167
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
++ F S+ I S A + +R K S Y R+ G+ + + +
Sbjct: 168 HENDVFKESNAIICPDSRAPGMGYRKPFLAMKPRSRPIRY--ARMLQGVGEGQIEMPRES 225
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----------- 213
P D+ +D++NGI KGCY+GQE+ R HR ++RKR + + +
Sbjct: 226 ALPMDSNIDIMNGIDFRKGCYVGQELTIRTHHRGVVRKRILPVQLYESTQAPPTSDIPVY 285
Query: 214 --------PPSGSPI------LTDDIEIGTLGVVVGKKALAIARID-------------- 245
PPSG + G +G LA+ R++
Sbjct: 286 DPDTSITPPPSGVEANISKVGASKGRSAGKFLNGIGNVGLAVCRLEIMTDIALTGESTQY 345
Query: 246 KVDHAIKKGMALT-VHGV------RVKASFPHWYK 273
K T V G +VKA P W K
Sbjct: 346 DAKQEFKITWDFTEVGGTNIADQPKVKAFVPPWIK 380
>gi|302417320|ref|XP_003006491.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261354093|gb|EEY16521.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 377
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 67/323 (20%), Positives = 114/323 (35%), Gaps = 60/323 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-------- 59
++ I V G FLQ +ITA++ +A LT G+IL I
Sbjct: 46 SRRLISVSGPDTAKFLQGVITANIN---APGPLYAAFLTATGRILNDVFIYPDTLAIGAG 102
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEH-------TF 110
E +F++E D + L + YKLR+ + + + V WN T
Sbjct: 103 APETSFLIEADADQAPVLAKHIRRYKLRAKFDVRLLDDSDARVWHLWNDAAPDPPAQSTA 162
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+ D R L R + D + Y R G+ + + L P
Sbjct: 163 AGDLMPDRRAPGMGYRLVRKGDAAPALDLEQVDEQAYTLRRYLRGVAEGQGEMLREHALP 222
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ +D + GI KGCY+GQE+ R +HR ++RKR + ++ + + D +
Sbjct: 223 QESNLDYMGGIEYHKGCYVGQELTIRTKHRGVVRKRILPCVLYNEGDAMPTELAYRDEGV 282
Query: 228 ---------------------GTLGVVVGKKALAIARIDKVDH--------AIKKGMALT 258
G +G LA+ R++ + + +
Sbjct: 283 DAGVIPCEAKIESCSKRARNPGKWLSGIGNLGLALCRLETLTDLAGPLPTSSYQPTDEFK 342
Query: 259 VH--------GVRVKASFPHWYK 273
V ++VKA P W +
Sbjct: 343 VEWTAGDATNSLKVKAFVPDWLR 365
>gi|326517503|dbj|BAK03670.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/360 (21%), Positives = 141/360 (39%), Gaps = 93/360 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------GSA 43
+ L++++ ++ G A FL +++T D+L+ + +A
Sbjct: 28 ATRLASRAVVRFRGPEAARFLNSLLTNDLLSQGAPASSQPQRYAPTPNAPARAPPPRYAA 87
Query: 44 ILTPQGKILLYFLISKI---------------------EEDTFILEIDRSKRDSLIDKLL 82
+LTPQG+ L + + + + ++D ++ D L+
Sbjct: 88 LLTPQGRFLYDLFLYRPAPRSQMLDRTGSAPQAGEVEGGDGEVLADVDAAEVDELLACFK 147
Query: 83 FYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNSS---- 114
Y+LRS V I+ Q + W Q +H +S+
Sbjct: 148 RYRLRSKVEIDNVSEEFLCWQRFGSDVAHAAPSTQEPEAQSIGWGQGSDHAAESSAQGNG 207
Query: 115 -----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST 164
D R I + +D + Y RI +G+ + +T+
Sbjct: 208 HGWQWLKDPRLDILGYRGIFPADTIPPLVEADKEADERHYLLWRIENGVAEGSTEIPKGE 267
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSG 217
P + + LN IS KGCYIGQE+++R HR +IRKR + + D+ G
Sbjct: 268 AIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLLPLKFVDENDQELEQAVAPG 327
Query: 218 SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272
S ++ D ++GT+ +G + + + R++ A+K+ +LT+ VRVKA P W+
Sbjct: 328 SDVVDDASGKKVGTVSTALGSRGMGLLRLE---AALKENASLTISDNRDVRVKAIKPDWW 384
>gi|119713296|gb|ABL97361.1| putative aminomethyltransferase [uncultured marine bacterium
HF10_45G01]
Length = 296
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 27/291 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++++ + + G+ A FLQ +I+ D+ + + S++LTPQGK L F+I K + +
Sbjct: 9 LNDRAILYINGEDAKEFLQNLISNDLNKVSDAYSCFSSLLTPQGKFLYEFIIVK-HKSGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------- 114
+L+ ++ + + L +L YKLRS V I VV +++ E + +
Sbjct: 68 LLDCEKPQAEELFTQLSLYKLRSKVEILNLSNEFVVAAFSHEKFLTFDTAKDQSGFTIKY 127
Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
F+D R L + + +++K Y+ L + GIV + + L
Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLNLHDANLKEYYSLSHSLGIVPKDLNKLK 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+F + + LNGI KGCY+GQE +RI+ +N + KR I G I
Sbjct: 188 EKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLFPINVISGKLHEGESIYN 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+++EIG + + A+ I ++ + + + P W K
Sbjct: 248 NEVEIGKVLIDSDYP-FAL--IKYLNENFDEKANFKTKEASINVNKPDWIK 295
>gi|242094558|ref|XP_002437769.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor]
gi|241915992|gb|EER89136.1| hypothetical protein SORBIDRAFT_10g002310 [Sorghum bicolor]
Length = 414
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/367 (20%), Positives = 134/367 (36%), Gaps = 100/367 (27%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGS--------------- 42
+ L++++ ++ G A FL +++T D+ R +
Sbjct: 36 ACRLASRAVVRFAGPEAARFLHSLLTNDLLSAFSAAAASAPQRYAPTPNAPARGPAAPAY 95
Query: 43 -AILTPQGKILLYFLISKI-------------------------EEDTFILEIDRSKRDS 76
A+LTPQG+ L + + E + ++D ++ D
Sbjct: 96 AALLTPQGRFLYDLFLYRPPPPSQMLDRTGSAPETGEAPEGDTGEPQEVLADVDAAEVDD 155
Query: 77 LIDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQEHTFSNSS 114
L+ Y+LRS V I+ Q + W Q + S
Sbjct: 156 LVACFKRYRLRSKVEIDNVSENFACWQRFGHNVVHTEPSTQEPEAQSIGWGQGVDHAGES 215
Query: 115 FI-----------DERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNT 158
D R + +D + Y RI +G+ + +T
Sbjct: 216 AAQGNGHGWQWLKDPRLDYLGYRGIFPANTIPPLVESDKEADERHYQLWRIENGVAEGST 275
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------ 212
+ P + + LN IS KGCYIGQE+++R HR ++RKR M + D+
Sbjct: 276 EIPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVVRKRLMPMKFVDENGQELE 335
Query: 213 --LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVK 265
+ GS ++ +IGT+ +G + + + R++ A+K G AL + V+V+
Sbjct: 336 EAVVAPGSEVVDEASGKKIGTVNTALGSRGMGLLRLE---EALKPGSALRISDNRDVKVQ 392
Query: 266 ASFPHWY 272
A P W+
Sbjct: 393 AIKPDWW 399
>gi|15604328|ref|NP_220844.1| hypothetical protein RP464 [Rickettsia prowazekii str. Madrid E]
gi|3861020|emb|CAA14920.1| unknown [Rickettsia prowazekii]
gi|292572080|gb|ADE29995.1| Putative aminomethyltransferase GcvT-like protein [Rickettsia
prowazekii Rp22]
Length = 285
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N+ IK+ G ++ FLQ +IT D+ K + +L QG+ L F + +++
Sbjct: 5 LINREIIKIIGLDSLIFLQKLITNDICK---KRYCYTYLLNNQGRYLFDFFVYVHKKEEI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
++ID+S + +LI L FYKLRS + II+ V+ S + + D R++
Sbjct: 62 YIDIDKSNKTALIAHLNFYKLRSKIQIIDCSEEYKVIYSHKKLDIDMLITVRDPRYTK-- 119
Query: 125 VLLHRTWGHNEKIASDIK-------------------TYHELRINHGIVDPNTDFLPSTI 165
L R+ + S Y E + N I+D D +
Sbjct: 120 -LGFRSINKLDITCSSDNMANMESISSITSYCQSMNPIYLEDKYNFAIIDGIEDLITDKS 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTD 223
P+ + LN IS KGCY+GQE++SR +++ +IR++ IT +DL IL D
Sbjct: 179 IPNMYGAEELNAISFEKGCYVGQEIISRTKYQGVIRRKVYRITANEDLLSLVQDDVILAD 238
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ +IG + K +A+ ++K H K +TV G+++ S WY
Sbjct: 239 NEKIGVICSSYQNKGIALI-MEKKYHDYKT-YNITVKGIKINLSLAPWY 285
>gi|91762244|ref|ZP_01264209.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718046|gb|EAS84696.1| GcvT-like Aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 295
Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 27/289 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ + + G A FLQ +I+ D+ + + +++LTPQGK L F+I K + +
Sbjct: 9 LEDRGILYINGADAKEFLQNMISNDINKVSEDSSCFASLLTPQGKFLFAFIIIK-HKSGY 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111
++ ++S+ ++L +L YKLRS V I VV ++N+E
Sbjct: 68 FIDCEKSQTEALFKQLGVYKLRSKVEIMNLSNEFVVAAFNKEKFLEFEGSKDIAGNTIKY 127
Query: 112 --NSSFIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
+S +D R L + + E S I Y++L GI N + L
Sbjct: 128 REDSILLDPRNKDLGARLIINLEKLYLSLKKLELKDSPITEYYKLSHQLGIPQKNMNELQ 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+ +F + + LNGI KGCY+GQE +RI+ +N + KR + I + I
Sbjct: 188 NKLFGIECNFEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPIYLIEGEINQDDLIYN 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
D EIG + + + A+ I +D + ++K P W
Sbjct: 248 GDFEIGKVL-ISNEYPFAL--IKYLDDNFNQENEFKSKNAKLKIKIPSW 293
>gi|72393355|ref|XP_847478.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70803508|gb|AAZ13412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 339
Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 54/323 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KI 60
LS+++ ++V G A FLQ + T D+ L + L G+++ + +
Sbjct: 5 CLLSSRALLQVTGSVAHEFLQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRT 64
Query: 61 EED--TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------- 103
E T ++++ D+L++ L Y++R + I VV++
Sbjct: 65 PEGQVTIMIDVHCGVADTLLEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNA 124
Query: 104 ------------WNQEHTFSNS---------SFIDERFSIADVLLHRTWGH---NEKIAS 139
+QE + +F D R L +
Sbjct: 125 GSSPSSSSATYGGDQELSGPQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLD 184
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
K Y + G+ + F PS P +A DLL G+S KGCY+GQE+ R +
Sbjct: 185 SEKLYKKFLYAAGVGEGPEVFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLV 244
Query: 200 IRKRPMIITGTDDL---------PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHA 250
RKR + + +L P ++ + ++G + G L + R++ VD
Sbjct: 245 TRKRTVPLFLQGELFDGKGGEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDIT 304
Query: 251 IKKGMALTV-HGVRVKASFPHWY 272
+ L++ G V A P W+
Sbjct: 305 TRSFPGLSLSDGTTVDARIPEWW 327
>gi|226530732|ref|NP_001147280.1| aminomethyltransferase [Zea mays]
gi|195609448|gb|ACG26554.1| aminomethyltransferase [Zea mays]
Length = 407
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 75/365 (20%), Positives = 130/365 (35%), Gaps = 98/365 (26%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV-----LTLPYKIARGS--------------- 42
+ L++++ ++ G A FL +++T D+ R +
Sbjct: 31 ACRLASRAVVRFAGPEAARFLHSLLTNDLLSAFSAAGASSPQRYAPTPNAPARGPAAPAY 90
Query: 43 -AILTPQGKILLYFLISKIEE------------------------DTFILEIDRSKRDSL 77
A+LTPQG+ L + + + ++D ++ D L
Sbjct: 91 AALLTPQGRFLYDLFLYRPPPRSQMLDRTGSAPETGEAPEGHPHLQEVLADVDAAEVDDL 150
Query: 78 IDKLLFYKLRSNVIIE----------------------IQPINGVVLSWNQEHTFSNSSF 115
+ Y+LRS V I+ Q + W Q + S
Sbjct: 151 VACFKRYRLRSKVEIDNVSENFACWQRFGHDVVHTEPSTQEPEAQSIGWGQGVDHAGESA 210
Query: 116 I-----------DERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTD 159
D R + +D + Y RI +G+ + +T+
Sbjct: 211 AQGNDHSWQWLKDPRLDYLGYRGIFPADTIPPLVESDKEADERHYQLWRIENGVAEGSTE 270
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------- 212
P + + LN IS KGCYIGQE+++R HR +IRKR M + D
Sbjct: 271 IPKGEAIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLMPMKFVDGNGQELEQ 330
Query: 213 LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKAS 267
GS ++ ++G + +G + + + R++ A+K G AL G VRV+A
Sbjct: 331 AVAPGSEVVDEASGKKVGAVSTALGSRGMGLLRLE---EALKPGSALRAGGNRDVRVQAI 387
Query: 268 FPHWY 272
P W+
Sbjct: 388 RPDWW 392
>gi|310791527|gb|EFQ27054.1| folate-binding protein YgfZ [Glomerella graminicola M1.001]
Length = 404
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 72/344 (20%), Positives = 120/344 (34%), Gaps = 76/344 (22%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLISKI-- 60
L ++ I V G A FLQ +IT D+ + + +A L G++L I
Sbjct: 54 LPSRRLISVAGPDAAKFLQGVITRDIASKEARARQTGFYAAFLNATGRVLHDVFIYPDLA 113
Query: 61 ------------EEDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQ 106
F++E+D ++ + L + YKLR+ V + V +W+
Sbjct: 114 GLGGDVAAESEQAGTRFLVEVDANEAERLAKHIKRYKLRAKLNVRLLATDEATVWHAWDD 173
Query: 107 -------EHTFSNSSFIDERFSIADVLL---HRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ ++ D R L T + A+ +Y R G+ +
Sbjct: 174 GGKPMTTDAALLSTVTRDPRTPELGYRLVHGRDTPPPLDLDATTEDSYTIRRYMQGVAEG 233
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--------- 207
+ + P + MD +NGI KGCY+GQE+ R +HR ++RKR +
Sbjct: 234 QDEIIREHALPQETNMDYMNGIDYHKGCYVGQELTIRTKHRGVVRKRILPCMIYDVDRAT 293
Query: 208 -------------TGTDDLPPSGSPILTD-------DIEIGTLGVVVGKKALAIARIDKV 247
G + LP P T G +G L + R++ +
Sbjct: 294 PQTLQYRPEQDANHGPEGLPAETIPRETGIGRAGKRGRSAGKWLKGIGNVGLGLCRLEIM 353
Query: 248 DHAIKKGMA------------LTVHG------VRVKASFPHWYK 273
+ G A L G V++KA P W +
Sbjct: 354 TDVVLPGEAAASTFDPADEFLLQWGGEDKSNAVKIKAFVPEWLR 397
>gi|254455916|ref|ZP_05069345.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082918|gb|EDZ60344.1| Glycine cleavage T-protein (aminomethyl transferase) [Candidatus
Pelagibacter sp. HTCC7211]
Length = 297
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 27/291 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L +++ + V G+ A FLQ +I+ DV + + +++L+PQGK L F+I K + F
Sbjct: 9 LDDRAILYVNGEDAKEFLQNLISNDVNKVSDTNSCFTSLLSPQGKFLFEFIIIK-HKSGF 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSS--------- 114
I++ ++ + D L +L YKLRS V I VV +++ E TF +
Sbjct: 68 IIDCEKPQADGLFKQLSIYKLRSKVEILNLSNEFVVAAFSHEKFLTFDEAQDVPGFTLKY 127
Query: 115 -----FIDERFSIADVLL-------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
F+D R L + + E S + Y+ GIV + + L
Sbjct: 128 REDPIFLDPRNKQLGARLIINLEKLYLSLKKLELQDSKLHDYYSYCHKLGIVPKDLNKLQ 187
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+ +F + + LNGI KGCY+GQE +RI+ +N + KR + I G I
Sbjct: 188 NKLFGIECNYEELNGIDFKKGCYVGQENTARIKLKNKLSKRLLPINLVKGELTEGESIYH 247
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ EIG + + A+ + V+ + + + +K P W K
Sbjct: 248 KEKEIGKVL-IEKDYPFALIKFQDVN--LSENIDFNTKDASIKIEKPDWIK 295
>gi|171686930|ref|XP_001908406.1| hypothetical protein [Podospora anserina S mat+]
gi|170943426|emb|CAP69079.1| unnamed protein product [Podospora anserina S mat+]
Length = 425
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 123/325 (37%), Gaps = 57/325 (17%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------ 58
L ++S I + G A FL+ IIT ++ T P + +A L+ QG+IL I
Sbjct: 88 PLPSRSLISLSGPDAAKFLRGIITNELPTTPSTL-TYAAFLSAQGRILNDVFIYLDPRLT 146
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSS-- 114
D+F++E+ + +L+ L YKLRS I + P V+ W +
Sbjct: 147 SSPPDSFLIEVSTLEAATLVKHLKRYKLRSKCAIALLPQEEASVIAVWGSPDSIPAQGES 206
Query: 115 ---FIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
D R L G + + Y LR +G+ + + + PH+
Sbjct: 207 LRYCPDPRVPSWQRGLVLGGGSGLEGVQMQSEEVYTLLRYANGVAEGQEEIVRDGGLPHE 266
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---------------TGTDDLP 214
+ +DLL G+ KGCY+GQE+ R +HR ++RKR + DL
Sbjct: 267 SNLDLLGGVDFRKGCYVGQELTIRTEHRGVVRKRILPAMLYPSSASSPPTSLRYEEGDLA 326
Query: 215 ---PSGSPIL---TDDIEIGTLGVVVGKKALAIARID-------KVDHAIKKGMALTVHG 261
+GS + G G L + R++ + A+ GM
Sbjct: 327 GRIQAGSNVTRVGARGRPAGKWLGGRGNLGLVLGRLEMMTDLKLPGEAAVGTGMGFKEGD 386
Query: 262 -------------VRVKASFPHWYK 273
VRVKA P W +
Sbjct: 387 EFEVEVKGEEGEKVRVKAFVPGWLR 411
>gi|116191917|ref|XP_001221771.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51]
gi|121786583|sp|Q2H6N9|CAF17_CHAGB RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|88181589|gb|EAQ89057.1| hypothetical protein CHGG_05676 [Chaetomium globosum CBS 148.51]
Length = 437
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 81/362 (22%), Positives = 128/362 (35%), Gaps = 92/362 (25%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVL-----------TLPYKIARGSAILTPQGKIL 52
LS++ I V G A +LQ +ITA++ L +A LT QG+IL
Sbjct: 67 AELSSRKLISVSGPDAAKYLQGVITANLTPGYAGPNPTSEHLRSDAGFYAAFLTAQGRIL 126
Query: 53 LYFLISKIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103
I + DT +++E+D ++ D L + YKLR+ V + + V +
Sbjct: 127 HDVFIYRDVRDTTHPAGHSWLVEVDAAEADRLQKHIKRYKLRAKFDVRLLNEGEGRVWHA 186
Query: 104 WNQEHTFS-----------NSSFIDERFSIADVLLHRTWGHNEKIAS------DIKTYHE 146
W+ + S + + I A L HR + S Y
Sbjct: 187 WDDANPSSLTTTQPSFPSSSPTIITTPDHRAPNLGHRLLTFSTPTPSLPLPTLPETAYRL 246
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
R HGI + + L +T PH++ +D + KGCY+GQE+ R +HR ++RKR +
Sbjct: 247 RRYRHGIAEGQAELLYNTALPHESNLDATGAVDFRKGCYVGQELTIRTEHRGVVRKRVLP 306
Query: 207 IT-----------------------------GTDDLPPSGSPILTDDIE---IGTLGVVV 234
T ++ P+ + I + G V
Sbjct: 307 CVLYPDGQAEGGGVVVVPGEVGFRSDVGAEGVTAEMVPAEASIGRVGKKGRSAGKWLSGV 366
Query: 235 GKKALAIARI----DKVDHAIKKGMALTVHG-------------------VRVKASFPHW 271
G LA+ R+ D V G VR+KA P W
Sbjct: 367 GNLGLALCRLEIMTDVVLPGETGGTGFVEGDEFVVGLGGGSGEEGGEGKKVRIKAFVPDW 426
Query: 272 YK 273
+
Sbjct: 427 LR 428
>gi|253996915|ref|YP_003048979.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
gi|253983594|gb|ACT48452.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
Length = 335
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 38/302 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ +++ G A FLQ +T DV L + A +A TP+G++L FL + +
Sbjct: 33 CDLSHLGLLQLSGADAFTFLQGQVTNDVNQLKGETAHYTAYCTPKGRMLALFLAF-AQHE 91
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHTFSNSSFID---- 117
L++ + +L Y +RS V ++ I + LS + ++ F +
Sbjct: 92 RIHLQMPLELVAATAKRLKMYVMRSKVEVQDTSHDIIKIGLSGPNANALLSTQFAEIPQH 151
Query: 118 --------------------ERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGI 153
RF I + H + + ++ + L I G+
Sbjct: 152 DYELVTLDNGSLLKLPGSTHARFEIFTDINHAPAIWSALSAQASVANADYWEWLEIQAGV 211
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D + P +DLL+GI+ KGCY GQE+V+R + I++R +
Sbjct: 212 PDVKPE-TQEEFVPQMLNLDLLSGINFKKGCYTGQEIVARTHYLGSIKRRTYLAHVAQAT 270
Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA-S 267
+ + T + +G + G LA R +++ + + LT G + +
Sbjct: 271 AAGENILNTANDPVGKVVRSAPAPQGGYDILAEIRCAEINLENTEAIQLTASGHTLTLKT 330
Query: 268 FP 269
P
Sbjct: 331 LP 332
>gi|326500300|dbj|BAK06239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 77/360 (21%), Positives = 141/360 (39%), Gaps = 93/360 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------GSA 43
+ L++++ ++ G A FL +++T D+L+ + +A
Sbjct: 28 ATRLASRAVVRFRGPEAARFLNSLLTNDLLSQGAPASSQPQRYAPTPNAPARAPPPRYAA 87
Query: 44 ILTPQGKILLYFLISKI---------------------EEDTFILEIDRSKRDSLIDKLL 82
+LTPQG+ L + + + + ++D ++ D L+
Sbjct: 88 LLTPQGRFLYDLFLYRPAPRSQMLDRTGSAPQAGEVEGGDGEVLADVDAAEVDELLACFK 147
Query: 83 FYKLRSNVIIE----------------------IQPINGVVLSWNQ--EHTFSNSS---- 114
Y+LRS V I+ Q + W Q +H +S+
Sbjct: 148 GYRLRSKVEIDNVSEEFLCWQRFGSDVAHAAPSTQEPEAQSIGWGQGSDHAAESSAQGNG 207
Query: 115 -----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPST 164
D R I + +D + Y RI +G+ + +T+
Sbjct: 208 HGWQWLKDPRLDILGYRGIFPADTIPPLVEADKEADERHYLLWRIENGVAEGSTEIPKGE 267
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSG 217
P + + LN IS KGCYIGQE+++R HR +IRKR + + D+ G
Sbjct: 268 AIPLEYNLAGLNAISFEKGCYIGQELIARTHHRGVIRKRLLPLKFVDENDQELEQAVAPG 327
Query: 218 SPILTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKASFPHWY 272
S ++ D ++GT+ +G + + + R++ A+K+ +LT+ VRVKA P W+
Sbjct: 328 SDVVDDASGKKVGTVSTALGSRGMGLLRLE---AALKENASLTISDNRDVRVKAIKPDWW 384
>gi|114320486|ref|YP_742169.1| glycine cleavage T protein (aminomethyl transferase)
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226880|gb|ABI56679.1| glycine cleavage T protein (aminomethyl transferase)
[Alkalilimnicola ehrlichii MLHE-1]
Length = 328
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 64/302 (21%), Positives = 118/302 (39%), Gaps = 35/302 (11%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L I V G A FL + +T D+ +P R + P+G++L F + + +
Sbjct: 24 LTPLPEAGVIAVEGPDATTFLHSQLTHDIEGMPEGSWRLAGWCNPKGRLLALFRVVRDGD 83
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------NSSFI 116
+F L ++ +L + LR+ V ++ + ++L E N++
Sbjct: 84 QSFRLLCPGELVTGVMRRLQMFILRARVTLDDRSGEQLLLGLYGEEALDAATRELNTTLP 143
Query: 117 DERFSI--------------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + D + + D + + L+I G +
Sbjct: 144 EPSGTTHTHGATLLALAADRALLIAGPDRMKRLWLALHHLPVGDPQHWRLLQIRAGEPEI 203
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P A +D+++G+S KGCY GQEVV+R+ + ++KR I+GT P
Sbjct: 204 FQD-SQDLFIPQMANLDVIDGLSFRKGCYPGQEVVARMHYLGRLKKRMFPISGTGLPPRP 262
Query: 217 GSPILT-DDIEIGTLGVVVGK-----KALAIARIDKVD--HAIKKGMALTVHGVRVKASF 268
G+ + D +G + V LA+ +D + A+ +G +TV + A
Sbjct: 263 GTEVRDPADKRLGQVVVAESDGEDSFAGLAVLPLDHAEYGAALIEGKPITVGPLPEAAHP 322
Query: 269 PH 270
P
Sbjct: 323 PS 324
>gi|189184098|ref|YP_001937883.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda]
gi|189180869|dbj|BAG40649.1| hypothetical protein OTT_1191 [Orientia tsutsugamushi str. Ikeda]
Length = 288
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 18/287 (6%)
Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
M S +L +N++ +++ G A FL I T V+ A+ S IL+PQG+ L F +
Sbjct: 1 MHSYHLLNNRAILELSGCDASNFLLRITTN-VIPAANGEAKYSMILSPQGRFLFDFFLIN 59
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW------NQEHTFSN 112
+TF ++ S +++L+ KL +KLRS V I ++ ++ S N H N
Sbjct: 60 -NHNTFFIDCLASIKNALLSKLHIFKLRSKVQINDVSDFYDIIYSQFYINDSNLHHLNLN 118
Query: 113 SS-----FIDERFSIADV-LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
++ + D RF+ LL + S+ Y + I D D +
Sbjct: 119 TAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAI 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD 224
P + D LN IS +KGCYIGQE++SRI+ + ++RK+ T ++L +P++ +
Sbjct: 179 PPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPVMHNS 238
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
IG + +A+ R + I +TV ++K S P W
Sbjct: 239 NIIGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQW 285
>gi|89071053|ref|ZP_01158264.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
gi|89043384|gb|EAR49603.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
Length = 243
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+++ ++ G + FL ++T +V P R +A+LTPQGK + F + E +
Sbjct: 1 MSDRTIFELTGSDRVKFLDNLVTNNV-PAPGDGLRYAALLTPQGKYIADFFLL-AEPERL 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+++ +L +L Y+LR++V + + +F D R
Sbjct: 59 LIDAPAVVAPALAQRLSMYRLRADVALAEIDL----AVRRGTGPAPEGAFADPRHP---A 111
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
L R +G D + LR+ H + + + + + + LNG+ KGCY
Sbjct: 112 LGWRLYGTGA--GDDGTDFDALRVEHVVPEAGREL-DGDSYVLEMGFERLNGVDFRKGCY 168
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQEV +R++H+ +RK + G+ I++D G L V + LA R D
Sbjct: 169 VGQEVTARMKHKTDLRKGLARVRLEG-AAEPGTEIVSDGRSAGILHTVCASRGLAYVRYD 227
Query: 246 KVDHAIKKGMA 256
+ + G A
Sbjct: 228 RATGRMTAGDA 238
>gi|320592852|gb|EFX05261.1| aminomethyltransferase [Grosmannia clavigera kw1407]
Length = 409
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/351 (20%), Positives = 124/351 (35%), Gaps = 81/351 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59
L+++ I V G A FLQ IITA+++ AR SA L QG++L + +
Sbjct: 52 ARLASRRLISVAGPDAAKFLQGIITANMVPAAGASARPHGFYSAFLNSQGRVLHDVFVYR 111
Query: 60 IE--------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHT 109
+ F++E+D + +L + Y+LR+ V +++ + V +W +
Sbjct: 112 NTLSRPAVEIDPAFLVEVDAEQARTLEKHMRRYRLRAKVDVQLLDDDELAVWHAWGEGAA 171
Query: 110 FSNSSFI-----------DERFSIADVL-LHRTWGHNEKIA-----SDIKTYHELRINHG 152
+ ++ D R + + G +A D Y R G
Sbjct: 172 SAAAAAAATASPDVITVCDTRAPGLGWRHVAASSGLPPPLALAVDAVDEFAYRIRRYLWG 231
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P P ++ +DL+ GI KGCY+GQE+ R +HR ++RKR + D
Sbjct: 232 VAEGQREIQPGQALPLESNIDLMGGIDFHKGCYVGQELTIRTRHRGVVRKRVLPCVLYPD 291
Query: 213 LPPSGSPILTD------------------------DIEIGTLGVVVGKKALAIARIDKVD 248
P D G +G LA+ R++ +
Sbjct: 292 AENVDVPTQLDYAPHDISRDLAIPPETSIGRVGKKGRSAGKWLAGIGNVGLALCRLEPMT 351
Query: 249 H--------------------------AIKKGMALTVHGVRVKASFPHWYK 273
+G VR++A P W +
Sbjct: 352 DIVLPDEAAATAAAAASSTPGTFVMAWPADEGTDQAASSVRIRAFVPEWLR 402
>gi|94496221|ref|ZP_01302799.1| aminomethyl transferase [Sphingomonas sp. SKA58]
gi|94424400|gb|EAT09423.1| aminomethyl transferase [Sphingomonas sp. SKA58]
Length = 273
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DVLTL R + +LTPQGK L ++ +
Sbjct: 25 MTGTTLTDRALLRISGEEARAFLQGLLTRDVLTLQPGHPRWTGLLTPQGKALFDVILWED 84
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++ + S+ D L +L Y+LR V I + + W+ + D R
Sbjct: 85 GGD-VLIDCEASQADMLAKRLTLYRLRRKVTI--AREEALAVHWSPDAADQPH---DPRL 138
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ + R++ G+ + + + + L G+
Sbjct: 139 PALGHRWLASADDQTGEGDAAAAFRTHRLSLGVFEGVEELGQDQVLWLETNAQELGGVDY 198
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207
KGCY+GQE +R+ +RN + +R + +
Sbjct: 199 DKGCYVGQENTARMHYRNKVSRRLVAV 225
>gi|114331277|ref|YP_747499.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
gi|114308291|gb|ABI59534.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
Length = 356
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/316 (18%), Positives = 117/316 (37%), Gaps = 51/316 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IE 61
+ LS+ I+ G+ FLQ ++ DV T A TP+G++L FL+ + I
Sbjct: 40 LIDLSHLGLIRFSGEETQKFLQGQLSCDVHTTDSGKATYGGYCTPKGRLLSSFLLWQNIS 99
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDER 119
+ ++++++ +++ +L + LR+ VII+ + + ++ HT ++
Sbjct: 100 DYSYLMQLPAELTETIAKRLKMFVLRAKVIIQDHTEDCIRIGVAGKNAHTLLQNTLAGTV 159
Query: 120 FSIADVLLHRTWG---------------------------HNEKIASDIKTYHELRINHG 152
+ + ++ + + L I G
Sbjct: 160 LPTQPLAITAIPDGQVICHSENRFEILISPAHALSLWERLSSQARCAGAAAWDWLEIQEG 219
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P +D + G++ KGCY GQE+V+R Q+ +++R D
Sbjct: 220 VP-AIFKATQEQFIPQMINLDAIGGVNFKKGCYPGQEIVARTQYLGKVKRRMYRAHLDSD 278
Query: 213 LP---PSGSPILTDDIEIGTLGVVV----------GKKALAIARIDKVDHA-----IKKG 254
P +G + + D G++V G LA+ ++ ++ G
Sbjct: 279 SPLEITAGDNLFSADTGGQACGMIVNAAPAPAPAKGVDVLAVIQVSSIEANPIHCKTPDG 338
Query: 255 MALTVHGVRVKASFPH 270
LT+ + S P
Sbjct: 339 PQLTIQSLPY--SIPD 352
>gi|294084896|ref|YP_003551656.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664471|gb|ADE39572.1| glycine cleavage T protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 339
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 15/282 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++ + FI + G A+ FLQ+IITA+V TL R A+LTPQG++L+ F+I + +D
Sbjct: 47 AHMPDMGFIAIAGIEAVDFLQSIITANVETLDSGAMRQGALLTPQGRVLIDFMIYRTSQD 106
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--SSFIDERFS 121
+L+ + ++RD L +L Y+LR V IE + + WN + ++ F D R
Sbjct: 107 ELLLQCEANRRDDLYTRLRRYRLRRPVTIETRDDLACYVWWNLDIVPASMPHLFADRRDG 166
Query: 122 IADVL-----LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
+ + I +H +RI I D P ++ +D L+
Sbjct: 167 ALGYRYLGNDAQTVLSDHGATSGTIDEWHAIRIAKAIPQGALDLTPERALMLESGLDHLD 226
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-- 234
+ KGCYIGQEV +R +R ++++R D +P + I+ DD IG +
Sbjct: 227 AVDFGKGCYIGQEVTARTHYRGLVKRRLAPFM-IDAMPEPSADIMLDDAVIGRCKSIAPL 285
Query: 235 ---GKKALAIARIDKVDHAIKKGM--ALTVHGVRVKASFPHW 271
G L + ++ + G +LT+ + + P W
Sbjct: 286 PGGGAITLGLVKLSDLHMLQDSGQNPSLTIDSHVAQLALPDW 327
>gi|99034332|ref|ZP_01314366.1| hypothetical protein Wendoof_01000832 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 239
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 10/242 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDNRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114
+ T +LE + +I+KL K LR + ++ + V + +N + +S
Sbjct: 61 GKYT-LLECENMHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
F D R + + + E + D Y ++RI + + D D + ++ FP L+D
Sbjct: 119 FQDPRHKLLGMRIIHKDEMKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLIDK 177
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV 233
+NGIS KGCYIGQEVV+R+ + I R++ ++ G + LP G+ + ++ EIG L
Sbjct: 178 VNGISFNKGCYIGQEVVNRMSRQEIFRRKLYLVEGDNALPDIGTKVTNENNEEIGELRSS 237
Query: 234 VG 235
V
Sbjct: 238 VD 239
>gi|303314493|ref|XP_003067255.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240106923|gb|EER25110.1| Dcp2, box A domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1262
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA----RGSAILTPQGKILLYFLISK 59
V L N++ I + G + FLQ +IT +V++ + + + L QG++L I
Sbjct: 881 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 940
Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107
+ +++E+D+ + +L+ L +KLR+ + GV W+
Sbjct: 941 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 1000
Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ D R +A L + + TY RI
Sbjct: 1001 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRIL 1060
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + +
Sbjct: 1061 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 1120
Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243
+ LP +G+ I G +G LA+ R
Sbjct: 1121 NTEDPKPMPSSLRIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISGIGNVGLALCR 1180
Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
++ + G+A V+V A P W K
Sbjct: 1181 LETMTDISITGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 1231
>gi|169613713|ref|XP_001800273.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15]
gi|121935220|sp|Q0UE25|CAF17_PHANO RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|111061204|gb|EAT82324.1| hypothetical protein SNOG_09989 [Phaeosphaeria nodorum SN15]
Length = 406
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 119/326 (36%), Gaps = 60/326 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
L ++S I + G +A FL +IT D + +A L +G+++ I
Sbjct: 57 APLPHRSLIFLSGPTASKFLHGLITHDATRVSP---FYAAFLDARGRVICDVFIWVWPEL 113
Query: 59 --KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTF- 110
+ +E+D + ++L+ L +KLR + I P G V +W H
Sbjct: 114 IAQQGHWACYIEVDAGQANALMLHLKRHKLRHKLTISHVPAEGRDGIKVWAAWGDAHKQV 173
Query: 111 ----SNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ D R L R + D K Y R HG+ + + + P
Sbjct: 174 KDWGEIAGLQDPRAPGMYRYLANADRETIARDMQPVDTKFYDIQRYIHGVPEGSAEMPPY 233
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------------- 210
+ P +A +DL +GI KGCYIGQE+ R +H ++RKR + +
Sbjct: 234 STLPMEANIDLSSGIDFKKGCYIGQELTIRTKHTGVVRKRILPVRFHAGGAGAADPQAPV 293
Query: 211 ----DDLPPSGSPI--------LTDDIEIGTLGVVVGKKALAIARIDKV----------- 247
P G I L+ G + +G LA RI+ +
Sbjct: 294 NPSFAPQPQPGMDIRTLDDTGALSKGRPTGRIVAAIGNVGLATCRIENMTSMRVSTEGGF 353
Query: 248 -DHAIKKGMALTVHGVRVKASFPHWY 272
+ G+ + VRV+ W+
Sbjct: 354 YKEGTQFGVDVDGQVVRVEPVVHDWF 379
>gi|67515557|ref|XP_657664.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4]
gi|40746082|gb|EAA65238.1| hypothetical protein AN0060.2 [Aspergillus nidulans FGSC A4]
Length = 1243
Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 94/365 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR------GSAILTPQGKILLYFL 56
L+N+ I + G + FLQ ++T ++ R +A L G+IL
Sbjct: 844 YARLTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAF 903
Query: 57 IS---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFS 111
I + +E +++E+D+ + L+ L +KLR+ + + V SW
Sbjct: 904 IYPLTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPR 963
Query: 112 NSSF-------------------IDERFSIADVLLH-------RTWGHNEKI-------- 137
+++ +D R L RT+ E
Sbjct: 964 WAAYNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGE 1023
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR
Sbjct: 1024 EVDLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHR 1083
Query: 198 NIIRKRPMIITGTDD---------------------LPPSGSPI----LTDDIEIGTLGV 232
++RKR + + +D LPP+GS I G
Sbjct: 1084 GVVRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLG 1143
Query: 233 VVGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASF 268
+G LA+ R++ + D + G L V+VKA
Sbjct: 1144 GIGNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIV 1203
Query: 269 PHWYK 273
P W +
Sbjct: 1204 PTWTR 1208
>gi|115959466|ref|XP_001183295.1| PREDICTED: similar to GA20785-PA [Strongylocentrotus purpuratus]
Length = 277
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 21/232 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57
++ L+ +S + V G+ A LQ ++T DV L + S L QG++L +
Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79
Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110
+ +D +++LE D + L L Y++R V I + V ++ T
Sbjct: 80 YQWSKDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139
Query: 111 SNSS---------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTD 159
S F D R + G + + Y R G+ + +
Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I
Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAG 251
>gi|115717980|ref|XP_799220.2| PREDICTED: similar to GA20785-PA, partial [Strongylocentrotus
purpuratus]
Length = 251
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 21/232 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR---GSAILTPQGKILLYFLI 57
++ L+ +S + V G+ A LQ ++T DV L + S L QG++L +
Sbjct: 20 LNGSRLTGRSLMLVKGRDAQDLLQGLMTNDVQQLNGGEGQEVIYSMFLNKQGRVLYDVMC 79
Query: 58 SKIEED------TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTF 110
+ +D +++LE D + L L Y++R V I + V ++ T
Sbjct: 80 YQWSKDPEGDTQSYLLECDSAISQELHKHLKLYRIRKKVDITSLDSEYHVWSIFSPGPTP 139
Query: 111 SNSS---------FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTD 159
S F D R + G + + Y R G+ + +
Sbjct: 140 PPSPGSKSGPSHFFTDPRVKGLGQRVIVPQGSQVPGIEEVNEEDYMMHRYQWGVAEGVNE 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
P ++ + L+NG+S TKGCY+GQE+ +R H +IRKR M I
Sbjct: 200 LPTGDCLPLESNLALMNGVSFTKGCYLGQELTARTHHTGVIRKRVMPIQLAG 251
>gi|148259282|ref|YP_001233409.1| glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum
JF-5]
gi|326402437|ref|YP_004282518.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301]
gi|146400963|gb|ABQ29490.1| Glycine cleavage T-protein, C-terminal barrel [Acidiphilium cryptum
JF-5]
gi|325049298|dbj|BAJ79636.1| putative aminomethyltransferase [Acidiphilium multivorum AIU301]
Length = 275
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 13/272 (4%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ YL + I + G + FLQ +++ DV A SA+LTPQG+ L F I +
Sbjct: 6 TIAYLPARGVIGIEGPDRVAFLQGLVSNDVTKAEPGRAVWSALLTPQGRYLAEFFIL-TD 64
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNS-SFIDER 119
++ +L+ LI +L ++LRS V + V +W + + D R
Sbjct: 65 GESLLLDAPGVAVPDLIRRLSRFRLRSQVALRDRSDEFAVHAAWGGAPSAPGAIVAADPR 124
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
A L A+D Y R+ G+ D + D P +A L+GI
Sbjct: 125 LPAAGHRL--LAPAPLAGAADETAYRAHRLALGLPDHD-DLEPEKTLLMEAGFGDLHGID 181
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQE+ +R ++R ++++R + + DLP +G+ I + E+GTL +G++ L
Sbjct: 182 WDKGCYMGQELTARTRYRGLVKRRLVPVDAEADLPAAGA-ITAGEREVGTLRTSLGRRGL 240
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
A + L++ G+ + P W
Sbjct: 241 A------LLRLDALDARLSLDGIALTPDIPSW 266
>gi|19115416|ref|NP_594504.1| iron-sulphur cluster biogenesis protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351677|sp|Q09929|CAF17_SCHPO RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|1067223|emb|CAA91966.1| iron-sulphur cluster biogenesis protein (predicted)
[Schizosaccharomyces pombe]
Length = 325
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 40/296 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60
S++S I+V G A+ FLQ + T + + L QG++L I
Sbjct: 27 SSKSLIRVEGVDAVKFLQGLTTNKITL---DNPVYTGFLNTQGRVLFDSFIYPKVSNNGT 83
Query: 61 ---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING----VVLSWNQEHTFSNS 113
D +EID+ + L Y LRS I P V+ +E ++
Sbjct: 84 ENERSDELYVEIDKVAESDFLKHLKKYNLRSRCSIAKIPSEELSIKVIWDVKEESRLKDT 143
Query: 114 SF--IDERFSIADVL--LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
D RFS +L + T + + Y R +GI + + +PS FP +
Sbjct: 144 VAYAKDPRFSKQRLLRMIVPTSTCTSSSSGSLDDYKVFRYRNGIPEGPQEIIPSISFPLE 203
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---------DLPPSGSPI 220
+ MD + GI KGCY+GQE+ R + + RKR + + S +
Sbjct: 204 SNMDWMKGIDFHKGCYLGQELTVRTYYTGVTRKRIFPFIIPNYEDNPSQVIEPSAPLSIV 263
Query: 221 LTDDIEI-----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ G + ++GK LA+ R+ + L +G+ ++ + W
Sbjct: 264 AKQGEPVSRRSPGKIIAILGKVGLALVRLQYLK------SDLACNGIPIQLNTSIW 313
>gi|300311915|ref|YP_003776007.1| glycine cleavage system protein T [Herbaspirillum seropedicae SmR1]
gi|300074700|gb|ADJ64099.1| glycine cleavage T (aminomethyltransferase) protein [Herbaspirillum
seropedicae SmR1]
Length = 360
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 110/310 (35%), Gaps = 45/310 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++ I V G+ A FL +T DV L AR + +P+G++L FL+ + ++
Sbjct: 53 APLTSLGLIAVTGEDAASFLHGQLTNDVQHLDTGSARLAGYCSPKGRLLATFLMWRDDQA 112
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+ L++ RS + ++ +L + +R+ + VL T + +
Sbjct: 113 S-WLQLPRSLQPAIQKRLQMFVMRAKAKLADASTERGVLGLAGPATANALAEWFPVLPAA 171
Query: 119 -------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHG 152
R + A W + + I G
Sbjct: 172 PYDKIDNSHGTLIRLADAAGSPRYQWIAAIDTLTAAWPRLAQHLTPTASLAWRLSEIRAG 231
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P +L+ G++ KGCY GQE+V+R Q+ +++R M+ T
Sbjct: 232 VP-GIVAATQEQFVPQMINFELIGGVNFKKGCYPGQEIVARSQYLGKLKRRTMLATIDSA 290
Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIARI------DKVDHAIKKGMALTVH 260
+G + G+VV ALA+ + D V G AL H
Sbjct: 291 AARAGQEVFAAADPGQPCGMVVNAEALDDGHALALVEMKLAAAEDAVHLGAADGPALHFH 350
Query: 261 GVRVKASFPH 270
+ + + P
Sbjct: 351 ALPYELADPQ 360
>gi|304387443|ref|ZP_07369634.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304338536|gb|EFM04655.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 304
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 103/272 (37%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFID 117
D +L + + ++ I +L + LR+ V+ EI V + + S +
Sbjct: 77 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVF 135
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D VL HR H A+ + I G T
Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 194
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAVEAGTLLTADGE 253
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 254 EAGIVLDSVQDSENFTALAVIKFSAAQKELAA 285
>gi|320037549|gb|EFW19486.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 425
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59
V L N++ I + G + FLQ +IT +V++ + + + L QG++L I
Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103
Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107
+ +++E+D+ + +L+ L +KLR+ + GV W+
Sbjct: 104 TLPEENGGNEGTELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNT 163
Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ D R +A L + + TY RI
Sbjct: 164 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLLQPLPGQQASLSTYTLRRIL 223
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + +
Sbjct: 224 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 283
Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243
+ LP +G+ I G +G LA+ R
Sbjct: 284 NTEDPKPMPSSLRIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISGIGNVGLALCR 343
Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
++ + G+A V+V A P W K
Sbjct: 344 LETMTDISITGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 394
>gi|119174726|ref|XP_001239704.1| hypothetical protein CIMG_09325 [Coccidioides immitis RS]
gi|121752688|sp|Q1DK38|CAF17_COCIM RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
Length = 425
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 125/352 (35%), Gaps = 83/352 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59
V L N++ I + G + FLQ +IT +V++ + + + L QG++L I
Sbjct: 44 VRLVNRALISLTGADSTSFLQGLITQNVVSAKSRASPTTPFYAGFLNAQGRLLHDTFIYP 103
Query: 60 IEED----------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQE 107
+ +++E+D+ + +L+ L +KLR+ + GV W+
Sbjct: 104 TLPEENGGNEGMELGYLIEVDKEQVTNLLKHLKKHKLRAKLKFRALDEGERGVWAVWDNA 163
Query: 108 HTFSNSSFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ D R +A L + + TY RI
Sbjct: 164 KNWETKDTGDVLREVITCADNRAPAFGYRVLLAGDNLQNLSQPLPGQQASLSTYTLRRIL 223
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
HGI + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR + +
Sbjct: 224 HGIPEGQDELGRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKRVLPVQLY 283
Query: 211 DD----------------------LPPSGSPILTD-----DIEIGTLGVVVGKKALAIAR 243
+ LP +G+ I G +G LA+ R
Sbjct: 284 NTEDPKPMPSSSGIPVYSPDSQLLLPSAGANITKSSASGKGRSAGKFISRIGNVGLALCR 343
Query: 244 ID----------------------KVDHAIKKGMALTVHGVRVKASFPHWYK 273
++ + G+A V+V A P W K
Sbjct: 344 LETMTDISLTGESSQYNPSEEFKISWEANADAGVA-EAGEVKVTAFIPPWVK 394
>gi|288575997|ref|ZP_05977979.2| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
gi|288566522|gb|EFC88082.1| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
Length = 285
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 21/267 (7%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L S I+V G+ FL ++ D+ LP A + TP+G++L ++ ED
Sbjct: 4 RLPFFSVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRVLANMIVLNRGED- 62
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------EHTF 110
+L + +S++ +L + LR+ V P VV ++ E
Sbjct: 63 LLLVMAADLAESIVKRLRMFVLRAKVEFTPLPDFAVVGMLDESCHATPPDSPNLSFEALL 122
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
N + + + E A ++ I G + T
Sbjct: 123 DNGVYTIPLPHKGRLKIGEVAQLPEYDAQAENAWNLHEIRSGYP-WISAATKETAVAQML 181
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
++ G+ KGCY GQE+++R Q+R +++ +++G D L +G ++++D E G +
Sbjct: 182 NQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGVGVVSEDAEAGQI 240
Query: 231 ----GVVVGKKALAIARIDKVDHAIKK 253
G +LA+ + +
Sbjct: 241 INTALTENGSLSLAVIKFSAAQSPLTD 267
>gi|121604847|ref|YP_982176.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
naphthalenivorans CJ2]
gi|120593816|gb|ABM37255.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
naphthalenivorans CJ2]
Length = 317
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 21/249 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L++ I+ G+ A+ FLQ+ +T DV + A +A +G++ F++ K ++
Sbjct: 14 VQLTHLGLIRAAGEDAVKFLQSQLTQDVALMDLTQAHLAAFCNAKGRMQASFILFKRSQE 73
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L R + + +L + +R+ + + S + ++ A
Sbjct: 74 EVLLVCSRDILAATLKRLSMFVMRAKAKLSDASDEFSLYGVAGSAIESMAGSTRPAWTKA 133
Query: 124 DV------LLHRTWGHNEKIAS-------------DIKTYHELRINHGIVDPNTDFLPST 164
D+ L+ G + D++T++ L + GI T +
Sbjct: 134 DIGDANMVFLYPGAGQLRALWCAPAASPAPQAAGIDLETWNWLEVQSGIA-MITQPIFEA 192
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + + G++ KGCY GQE+V+R Q+R +++R ++ D P G +
Sbjct: 193 FVPQMLNYESVGGVNFKKGCYPGQEIVARSQYRGTLKRRACLVHA-DAAPAVGQEVFHIK 251
Query: 225 IEIGTLGVV 233
G+V
Sbjct: 252 DAEQPCGLV 260
>gi|330814289|ref|YP_004358528.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Pelagibacter sp. IMCC9063]
gi|327487384|gb|AEA81789.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Pelagibacter sp. IMCC9063]
Length = 298
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 26/292 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+++L ++ I + G +PFLQ+II+ D+ + K + S +LTPQGK L F+I+K
Sbjct: 6 AIHLEQKTVISINGSDVVPFLQSIISNDIQLVDEKTSIYSCLLTPQGKFLYDFIITKKSS 65
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-------- 114
D ++L+ ++ D I KL YKLRS + I V L +N + S
Sbjct: 66 DHYLLQCNKLIVDDFIAKLTVYKLRSQIQISKVDQEYVSLFFNMANEIIASKFNTIQGFT 125
Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIVDPNTD 159
F D R + V + + + + TY ++ G+VD +
Sbjct: 126 IQNQYGFFFNDPRLADLGVHGIILKDKFDDLVKELNVNLLPLDTYVKICHQVGLVDLVPE 185
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
S F + + LNG+S KGC++GQE +R+ +N IRKR I G P
Sbjct: 186 LALSNYFSLELNLKELNGVSFKKGCFVGQENTARMNLKNKIRKRVFPIQIIQGSVEIGQP 245
Query: 220 ILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
I ++ IG + + I ++ H + + ++L +K P+W
Sbjct: 246 IKDNEKTIGKIIS-LDPACFGILDAEESKHLLDQTISL--EQSSIKILKPYW 294
>gi|253998575|ref|YP_003050638.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4]
gi|253985254|gb|ACT50111.1| folate-binding protein YgfZ [Methylovorus sp. SIP3-4]
Length = 344
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 34/295 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ ++V G+ I FLQ +T D+ L + + T +G++L FL +
Sbjct: 40 ADLSHLGLLQVDGEDTITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQG- 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------------------EIQPIN 98
L+++ + ++ +L Y LRS V+I E P
Sbjct: 99 HIHLQLNGRLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTE 158
Query: 99 GVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIV 154
+S + T RF I A W E+ + + L I GI
Sbjct: 159 VHGISTQENATLIRLPGALPRFEIFTAQENAQELWQELEQHFDPVGQTGWDWLEIEAGIP 218
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD 212
+ P +D L GI+ KGCY GQE+V+R + +++R +I +T TD
Sbjct: 219 EIFP-ATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATDS 277
Query: 213 LPPSGSPILTDDIE-IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LP G + + E +G + G + + ++ G +T G+ +
Sbjct: 278 LPQPGDEVFAGEGEAVGQVVRSSGIAGVESRVLIELRQEASLGKTVTWQGLPIDL 332
>gi|259489751|tpe|CBF90281.1| TPA: aminomethyl transferase, putative (AFU_orthologue;
AFUA_5G12430) [Aspergillus nidulans FGSC A4]
Length = 438
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/365 (20%), Positives = 132/365 (36%), Gaps = 94/365 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR------GSAILTPQGKILLYFL 56
L+N+ I + G + FLQ ++T ++ R +A L G+IL
Sbjct: 39 YARLTNRGLISITGVDSTTFLQGLVTQNMFIPNDPNRRVRHTGSYAAFLNSTGRILNDAF 98
Query: 57 IS---KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFS 111
I + +E +++E+D+ + L+ L +KLR+ + + V SW
Sbjct: 99 IYPLTQADEPAWLVEVDKDQVPKLLKHLKKHKLRAKLKLRALDDGERTVWASWKNHSEPR 158
Query: 112 NSSF-------------------IDERFSIADVLLH-------RTWGHNEKI-------- 137
+++ +D R L RT+ E
Sbjct: 159 WAAYNLESTSSSPFPAHASIVGCVDTRAPGFGSRLVVPGDGDLRTYFQGEDETHIAATGE 218
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
D+ TY R+ HG+ + ++ + + P + MD++ G+ KGCY+GQE+ R HR
Sbjct: 219 EVDLDTYTVRRMLHGVAEGQSEIISESALPLECNMDMMRGVDFRKGCYVGQELTIRTHHR 278
Query: 198 NIIRKRPMIITGTDD---------------------LPPSGSPI----LTDDIEIGTLGV 232
++RKR + + +D LPP+GS I G
Sbjct: 279 GVVRKRILPVQLYNDGLGAISSSSDSPVYDPTVDIRLPPAGSNISKVSARKGRSAGKFLG 338
Query: 233 VVGKKALAIARID------------------------KVDHAIKKGMALTVHGVRVKASF 268
+G LA+ R++ + D + G L V+VKA
Sbjct: 339 GIGNIGLALCRLEMMTDIALTGEASQYSAEQEFKVSWEADAEVSHGQTLKSGEVKVKAIV 398
Query: 269 PHWYK 273
P W +
Sbjct: 399 PTWTR 403
>gi|157870281|ref|XP_001683691.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68126757|emb|CAJ05212.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 368
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/350 (20%), Positives = 122/350 (34%), Gaps = 84/350 (24%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
L ++ ++V G A FLQ I T D+ L + L G++L +
Sbjct: 9 CRLPSRRILRVRGTDAHDFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------- 111
+ + ++++ L+D L K+R V I+ VVL+ +E +
Sbjct: 69 HEGQASILVDVHERSATELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSADAQRSRDS 128
Query: 112 -----------------------NSSFIDER------------------------FSIAD 124
F+D R F +
Sbjct: 129 ASGCDARESSVTSLSPETLEERHTECFLDPRNDALFPRPPPPSSSSPPAAVTSPSFCLRK 188
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
++ TW S +Y L + GI + F + P + +D L G+S KGC
Sbjct: 189 CVVPATWA---PPLSSPDSYTTLLYSRGIGEGPDVFKCNKSLPFEGNLDFLKGVSFHKGC 245
Query: 185 YIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTDD------------------- 224
Y+GQE+ R + RKR + + G ++ P + I+TD+
Sbjct: 246 YVGQELTHRTHVMLVTRKRTVPLHFGPANVDPPAAGIITDEGAVTKTWPVEVGEPLYSAA 305
Query: 225 -IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272
+IG + V G+ + + R+ VD A L + G V+ P W+
Sbjct: 306 REKIGEVTGVCGQVGIGLFRLRYVDKATHTVPGLQLKDGTPVQTHLPDWW 355
>gi|94310768|ref|YP_583978.1| glycine cleavage T protein (aminomethyl transferase) [Cupriavidus
metallidurans CH34]
gi|93354620|gb|ABF08709.1| putative glycine cleavage T protein (aminomethyl transferase)
[Cupriavidus metallidurans CH34]
Length = 336
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/305 (21%), Positives = 119/305 (39%), Gaps = 47/305 (15%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V G A FL + +T V L AR + +P+G+++ FL+ + + D +L+
Sbjct: 28 LGLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWR-DADGIVLQ 86
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WNQEHTF 110
+ + + +L + LR+ + +L T
Sbjct: 87 LSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQQAGLPTPQAPLATA 146
Query: 111 SNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
S+ + R + AD L ++ G +AS + L + GI
Sbjct: 147 SDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVASP-AFWDWLDVASGIPRI 205
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P +L+ G++ KGCY GQEVV+R Q+R +++R + GT D+P +
Sbjct: 206 AA-ATQEQFVPQMINFELIGGVNFRKGCYPGQEVVARSQYRGTLKRRMWRVRGTGDVPAA 264
Query: 217 GSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----KGMALTVHGVRV 264
+ I + G++V G + LA +ID + A+ G A++ +
Sbjct: 265 AAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAASGPAVSTGALPY 324
Query: 265 KASFP 269
+ P
Sbjct: 325 EVPLP 329
>gi|170571134|ref|XP_001891614.1| aminomethyltransferase [Brugia malayi]
gi|158603797|gb|EDP39585.1| aminomethyltransferase, putative [Brugia malayi]
Length = 275
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 12/267 (4%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L ++ ++ GK FLQA++T D+ L A+ + +L +G+I+ ++ + + D
Sbjct: 9 LRHRGLLRAKGKEVFQFLQALVTNDIRRLVDGQAQYALLLNNRGRIVEDLILYR-QADEI 67
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++E DRS + L +K+ +V IE + + T D R
Sbjct: 68 LIESDRSNQLKLRKLFEMFKIHKDVTIE--EVTERYVYHADSATNBIPGIQDPRVPSFGK 125
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ +++ D Y E R + GI + + P D++NG+S KGCY
Sbjct: 126 RILSKILPDDQTV-DENAYRERRFDFGIPEGPNEVAGE--LPLFMNADIMNGVSANKGCY 182
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+ +R + IRKR + T + + +G+ I +D G + G+K LA+
Sbjct: 183 LGQELTARALNAPEIRKRLLPFTCKNMV--TGTLINSDGRRAGKVIACTGRKGLALVYT- 239
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHWY 272
+ ++ P W+
Sbjct: 240 ---SGSNPPTHFQLQNENIEIFLPSWW 263
>gi|83644620|ref|YP_433055.1| aminomethyltransferase GcvT-like protein [Hahella chejuensis KCTC
2396]
gi|83632663|gb|ABC28630.1| predicted aminomethyltransferase related to GcvT [Hahella
chejuensis KCTC 2396]
Length = 330
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 28/274 (10%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+N + +++ G A+ F+Q T D+ + + +A TP+G+++ F I++ + D
Sbjct: 28 RLTNVALLEIKGPDAVKFMQGQFTCDIQEITISHSSLAACCTPKGRMVALFRIAQAKPDC 87
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFI----DER 119
++L + S + L YK+ + + GV+ LS + + S SS + D
Sbjct: 88 YLLRLPVEVAQSFLAHLNKYKVFYKCTVTLLEDWGVIGLSGDLDSLPSLSSAVPTSADSC 147
Query: 120 FSIADVLLHRTWGH---------------------NEKIASDIKTYHELRINHGIVDPNT 158
+ +LL R G+ N+ A ++ + L + G+ +
Sbjct: 148 QTSDGLLLIRPPGNLSRMECWLDSAQASKLLPDLDNQCAAGAVEDWERLEVLSGLGEVYP 207
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
L P + L IS KGCY GQE+V+R+Q+ ++KR +++ P GS
Sbjct: 208 QTL-DEFIPQMLNLQALGAISFKKGCYTGQEIVARMQYLGTLKKRMFLLSSETITPAPGS 266
Query: 219 PILTD-DIEIGTLGVVVGKKALAIARIDKVDHAI 251
I+ + IG++ + LA+ D +
Sbjct: 267 AIIDETGARIGSVVRSAQGQTLAVLDKSAADGKV 300
>gi|332185466|ref|ZP_08387214.1| aminomethyltransferase folate-binding domain protein [Sphingomonas
sp. S17]
gi|332014444|gb|EGI56501.1| aminomethyltransferase folate-binding domain protein [Sphingomonas
sp. S17]
Length = 252
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L++++ +++ G+ FLQ ++T DV L R + +LTPQGK L FL+ E
Sbjct: 10 PATTLTDRTLLRIAGEDVCGFLQGLVTQDVQGLTADAPRWAGLLTPQGKALFDFLLW-AE 68
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
D +++ + ++ ++L +L Y+LR + I P V S + + R
Sbjct: 69 GDAILIDAEATQAEALTRRLSIYRLRRAITIAPVPELAVHWSLSADT--------QPRDP 120
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
L HR W E S + + R++ G+ + + + LNG+S T
Sbjct: 121 RLPDLGHRWWAPAEP-GSATEAWTAHRLSLGVTEGVGELGSGETLWLECNARELNGVSFT 179
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA- 240
KGCY+GQE +R+ HR+ + +R ++ L G ++G + +AL
Sbjct: 180 KGCYVGQENTARMHHRSKVNRRLVV----APLGEPGDRTRAVYPDLGLMVEHRRVEALGD 235
Query: 241 IARIDKVDHAIKKG 254
R + ++ A++ G
Sbjct: 236 AIRPEWLEQAVEAG 249
>gi|313200647|ref|YP_004039305.1| folate-binding protein ygfz [Methylovorus sp. MP688]
gi|312439963|gb|ADQ84069.1| folate-binding protein YgfZ [Methylovorus sp. MP688]
Length = 344
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 35/268 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ ++V G+ AI FLQ +T D+ L + + T +G++L FL +
Sbjct: 40 ADLSHLGLLQVDGEDAITFLQGQLTNDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQG- 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------------------EIQPIN 98
L+++ S + ++ +L Y LRS V+I E P
Sbjct: 99 HIHLQLNGSLLEPILKRLKMYVLRSKVVIQDVSTTIVRIGVAGSNSEAILGAMFEFVPTE 158
Query: 99 GVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKT--YHELRINHGIV 154
+S + T RF I + W E+ + + L I GI
Sbjct: 159 VHGISTQENATLIRLPGALPRFEIFTSQENAQELWQELEQHFDPVGQTGWDWLEIEAGIP 218
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDD 212
+ P +D L GI+ KGCY GQE+V+R + +++R +I +T TD
Sbjct: 219 EIFP-ATQEAFVPQMVNLDALGGINFKKGCYTGQEIVARTHYLGKVKRRSLIGSLTATDQ 277
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALA 240
+P G + + E +G +V +A
Sbjct: 278 IPAPGDEVFIGEGEA--VGQIVRSSGIA 303
>gi|302879423|ref|YP_003847987.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2]
gi|302582212|gb|ADL56223.1| folate-binding protein YgfZ [Gallionella capsiferriformans ES-2]
Length = 311
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ LS + ++V G A FLQ +++ D+ + A+ S+ T +G++L FLI +
Sbjct: 13 TLCNLSQLATLRVSGSDAHSFLQNLLSNDIREVSATQAQYSSFNTAKGRMLANFLIWRDA 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116
+D ++L++ + D+L KL Y LR+ V I V L + H ++ +
Sbjct: 73 DD-YLLQLPETLADALRKKLGMYVLRAQVKITDARHEVVSLGLSGCHPALPATCLELPVM 131
Query: 117 ----------------DERFSIA----DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
D RF + + ++ SD + +R ++ P
Sbjct: 132 GVIESAELACRIIKIGDARFMLNCTPEQQPMLSAALDSQMTGSDTWDWLNIRAGTPVILP 191
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
T P DL+ GI+ KGCY GQE+V+R+ + ++R +
Sbjct: 192 AT---QEQFVPQMVNFDLIGGINFKKGCYPGQEIVARMHYLGKPKRRMY-LAHVLSAANP 247
Query: 217 GSPILTDDIEIGTLGVVVGK 236
G + ++++ G++V
Sbjct: 248 GDELYSEEMADQACGMIVNA 267
>gi|254672451|emb|CBA05856.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 304
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 104/274 (37%), Gaps = 26/274 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112
D +L + + ++ + +L + LR+ + EI V QE +
Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAF 135
Query: 113 SSFID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
++ D I + T + A + HE+R + + T
Sbjct: 136 AAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KE 192
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 193 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAVEAGTLLTAD 251
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 252 GEETGIVLDSVQDSENFTALAVIKFSAAQKELTA 285
>gi|261379095|ref|ZP_05983668.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
gi|269144476|gb|EEZ70894.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
Length = 287
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 22/269 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + ++V G+ FL ++ D+ L A + TP+G+++ L+ +D
Sbjct: 3 TLLPSFGVVRVSGEDRQSFLHGQLSNDINHLQSGQACYATYNTPKGRVIANMLVINRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSFIDE 118
+L + +S + +L + LR+ V+ EI GV + N +F +
Sbjct: 63 -LLLAMSEDLTESTVKRLRMFVLRAKVVFEIPDNYGVGAELAESAEPLAAREPNLAFAAQ 121
Query: 119 RFSIADVLLHRTWGHNEKI----------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
+ S + G +I A+ + I G T
Sbjct: 122 QDSDGICSIALPHGGILRIAPETALPPYDAAAESAWKLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLAADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIKK 253
+ V ALA+ + +
Sbjct: 240 IVLDSVKDSENFTALAVIKFSAAQKELTA 268
>gi|145356317|ref|XP_001422379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582621|gb|ABP00696.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 306
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 19/284 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFL--ISKIEE 62
L ++ ++V G A FLQ +T DV L A A LTP+GKI ++ E
Sbjct: 15 LDTRAVVRVAGADAAAFLQGAVTNDVRALREGGDAAYCATLTPKGKIFADAFVRLAGSES 74
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D F+L++DR K + L LR V IE + VV++ +S+ R
Sbjct: 75 DEFLLDVDREKSSEFLRALRMLSLRKRVTIEDANEHRVVVASADADVGDSSARAVRRDER 134
Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL---RINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ L R A RI G+ + ++ + P + D LNG+S
Sbjct: 135 LEQLGFRGIVPASDAAWRDAVADAHARTRIALGVAEGASEL--ANALPLECNFDALNGVS 192
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTD-DIEIGTLGVVVG 235
TKGCY+GQE +R + R ++RKR + P G I+ + +G + +
Sbjct: 193 FTKGCYVGQENTARQRFRGVVRKRIAPFVAIEPGARAPSVGGKIVNERGDVVGDVIAAIE 252
Query: 236 KK--ALAIAR----IDKVDHAIKKGMALT-VHGVRVKASFPHWY 272
+ L + R + A + G A G RV P W+
Sbjct: 253 DEDAVLGLVRARMSFIRAHVAGEPGSAFRIADGARVGVEPPSWW 296
>gi|91788384|ref|YP_549336.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
sp. JS666]
gi|91697609|gb|ABE44438.1| glycine cleavage T protein (aminomethyl transferase) [Polaromonas
sp. JS666]
Length = 317
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 22/282 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++ I+V G+ + FLQ +T DV L AR A +G++ F+I K +
Sbjct: 18 AELAHLGVIRVAGEDTVKFLQGQLTQDVALLSLSEARLGAFCNVKGRMQASFVIFKRSPE 77
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQE 107
+L R + + +L + LR+ ++ + W +
Sbjct: 78 EVLLVCSRDILPATLKRLSMFVLRAKAMLSDASAEFALYGVAGNAIELIVGGNRPVWTKS 137
Query: 108 HTFSNSS-FIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPST 164
S F+ L G E DI ++ L + GI T +
Sbjct: 138 DIGDASLMFLHPGAGQPRALWCAPAGSPRPEGPLLDIARWNWLEVRSGIA-MITQPIFEA 196
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + + G++ KGCY GQE+V+R Q R +++R + T +P G +
Sbjct: 197 FVPQMLNYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRAY-LAHTAGVPAVGQEVFHAS 255
Query: 225 IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+V A D + +++ A R+
Sbjct: 256 DAEQPCGLVAAAAATPSGGFDAI-VSMQTSAAADAGEGRLTL 296
>gi|300113362|ref|YP_003759937.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
gi|299539299|gb|ADJ27616.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
Length = 347
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 41/284 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ A FLQ ++T DV + + ++ + + P+G++L F + + +
Sbjct: 43 LSHLGLITVSGEDASDFLQNLLTNDVKEVNSQHSQLTGLCNPKGRLLAIFRLFQWNAN-L 101
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI--------------------QPINGVVLSWN 105
L + S ++++ +L Y LR+ V + + + V ++ N
Sbjct: 102 YLRLPHSLLEAVLKRLSMYVLRAQVSLADVSDHFCRFGLVGSKARDELKRYLGRVPMAVN 161
Query: 106 QEHTFSNSSFI-----DERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIVDP 156
+ + + RF + L + W K A+ T + I G+
Sbjct: 162 EVQQTPDCCVLRVPGKPSRFEVVGEFDTLQKLWDELSKTATPAGTHFWELATIRAGVATI 221
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPP 215
+ ++ P ++L GIS TKGCY GQEV++R+ +R +R + TGTD P
Sbjct: 222 YPE-TQASFIPQQVNLELKEGISFTKGCYPGQEVIARMHYRGKPSRRMFLAHTGTDQQPQ 280
Query: 216 SGSPILTDDIE----IGTLGVVV-----GKKALAIARIDKVDHA 250
G PI + E IG + G +L + ++ +++
Sbjct: 281 PGDPIYLANDEAKQVIGEIVTAQPAPEGGYDSLVVLQLARLEKG 324
>gi|113867578|ref|YP_726067.1| aminomethyltransferase [Ralstonia eutropha H16]
gi|113526354|emb|CAJ92699.1| Aminomethyltransferase [Ralstonia eutropha H16]
Length = 338
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 57/305 (18%), Positives = 109/305 (35%), Gaps = 43/305 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G A FL +T V L AR + +P+G++L FL+ + + +
Sbjct: 25 CSLPGLGLVRVAGDDAGSFLHTQLTNAVEDLKAGAARLAGYCSPKGRLLATFLMWR-DVE 83
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-----------------------QPINGV 100
+L++ + + +L + LR+ + P+ V
Sbjct: 84 GIVLQLSADIQAPVQKRLSMFVLRAKAKLSDITPTHAILGLAGAGAAKALAAAGLPVPEV 143
Query: 101 VLSWNQEHTFSNSSFID----ERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + + D R+ R + + L + G
Sbjct: 144 AFAVAEADGITVIRLPDGAGQPRWQLVLPAERAEAVRAALAASLQDATPALWDWLEVQSG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P +L+ G++ KGCY GQE+V+R Q+R +++R ++ G +
Sbjct: 204 LPRIVA-ATQEQFVPQMINFELVGGVNFRKGCYPGQEIVARSQYRGTLKRRMWLVQGEGE 262
Query: 213 LPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P + I + G++V G LA +ID A++ G A
Sbjct: 263 VPAPAAEIYRPEDPGQPCGMIVNAAPAPQGGWAGLAELKIDAAASALRLGSAEGA--AVA 320
Query: 265 KASFP 269
A+ P
Sbjct: 321 TATLP 325
>gi|296314110|ref|ZP_06864051.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
gi|296839260|gb|EFH23198.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
Length = 288
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112
D +L + + ++ I +L + LR+ V+ EI V QE +
Sbjct: 61 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPNLAF 119
Query: 113 SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++ D + VL H A+ + I G T
Sbjct: 120 AAQQDSDGICSIVLPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVKDSENFTALAVIKFSAAQKELTA 269
>gi|308389376|gb|ADO31696.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710]
Length = 304
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFID 117
D +L + + ++ I +L + LR+ V+ EI V + + S +
Sbjct: 77 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVF 135
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D VL HR H A+ + I G T
Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 194
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGE 253
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 254 EAGIVLDSVQDSENFTALAVIKFSAAQKTLSA 285
>gi|220934636|ref|YP_002513535.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995946|gb|ACL72548.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
Length = 354
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+Q I G+ A FLQ + DVL L + ++ TP+G++L F + + E
Sbjct: 41 CDLSHQGLIVAYGEEAGSFLQGQFSNDVLGLASAHSHLNSYCTPKGRMLANFRVFRRGE- 99
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---------SS 114
++ L + R+ +S++ +L + LRS V +E V + + S+
Sbjct: 100 SYYLRMPRAMVESVLKRLRMFVLRSKVTLEDADDALVRIGLSGPRAVEELQTALGDVPSA 159
Query: 115 FID----------------ERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154
D RF + L + + W + + + L I GI
Sbjct: 160 VNDVLHHNDITAIRVPGPHPRFELYGELEAMKQLWNKLNVRCAPVGAGPWALLDILAGIP 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ T P A M L+ G+S KGCY GQEVV+R+ + +++R +T D P
Sbjct: 220 N-VTPATSEAFVPQMANMQLIGGVSFKKGCYPGQEVVARMHYLGKLKRRMYRVTIDTDQP 278
Query: 215 P-SGSPILTDD----IEIGTLGVVVGKK--------ALAIARIDKVDHA 250
P G+ IL E G +V + ALA+ +I +
Sbjct: 279 PAPGTEILGAGGGETEEDQAAGRIVDAQLHPDGKVMALAVLQIAAAEAG 327
>gi|255067899|ref|ZP_05319754.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
gi|255047887|gb|EET43351.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
Length = 284
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 25/270 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G++L ++ ED
Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRVLANMIVLNRGED 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + + ++++ +L + LR+ VI E P V ++ + S ++ F
Sbjct: 63 -LLLIMAQDLIEAIVKRLRMFVLRAKVIFEPLPDFAVAGELDETASPSPAAEPALSFPAQ 121
Query: 124 DVLLHRT----------------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
T + A + HE+R + + T T
Sbjct: 122 ADNGVYTITLPHSGRLKIGEAGLLPEYDAAAENAWNLHEIRSGYAWISTVT---KETAVA 178
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ G+ KGCY GQE+++R Q+R +++ ++ G D L +G + E
Sbjct: 179 QMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLRG-DSLEAAGVTVQNGGEEA 237
Query: 228 GTL----GVVVGKKALAIARIDKVDHAIKK 253
G + +G +LA+ + +
Sbjct: 238 GQIINTALTDIGSLSLAVIKFSAAHADLTD 267
>gi|262277435|ref|ZP_06055228.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114]
gi|262224538|gb|EEY74997.1| putative glycine cleavage T protein [alpha proteobacterium HIMB114]
Length = 273
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 7/266 (2%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N+ I + G + FL IIT DV + + S +L+PQGK++ +F ISKI ++ F++
Sbjct: 11 NKRVISITGDESETFLNNIITNDVKKINSNNSIYSCLLSPQGKVISHFFISKI-DNKFLI 69
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERFS-IADV 125
+D D LI+KL FYKLRS V I+ + + V+ + ++ F++ F D R
Sbjct: 70 IVDDYLSDDLIEKLNFYKLRSQVDIKDENLYNVIFTTDENFKFNSILDFEDPRIPNFGKY 129
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
+ + + D + Y++L +G++D + + F + M LN I +KGCY
Sbjct: 130 FISKKNDNLGINLEDSEKYYKLINLNGLIDSIFNQIQGQYFSLELNMQELNAIDFSKGCY 189
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE +R+ + I K+ + L SG I + IG + V A+ ++
Sbjct: 190 VGQENTARMSLKEKISKKLFRLNSESKL-SSGEEIFFNKEIIGKI--VSENPNFAMIKML 246
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271
K + K + T ++VK S P+W
Sbjct: 247 KFNEFNDKDLK-TQDDIKVKISKPNW 271
>gi|254671408|emb|CBA08895.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 304
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 26/274 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +L + + ++ + +L + LR+ + EI V E + + +
Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL--EASAEPLAAQEPSL 133
Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ VL HR H A+ + I G
Sbjct: 134 AFTAECVSDGICSVVLPHRGILHIAPETALPPYDAAAESAWKLHEIRSGYP-WICAATKE 192
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +GS + D
Sbjct: 193 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAAD 251
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 252 GEEAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 285
>gi|161870132|ref|YP_001599302.1| hypothetical protein NMCC_1171 [Neisseria meningitidis 053442]
gi|161595685|gb|ABX73345.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 304
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 17 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
D +L + + ++ + +L + LR+ + EI V + + + S +
Sbjct: 77 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVDAELAASAEPLAAQEPSLVF 135
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D VL HR H A+ + I G T
Sbjct: 136 TAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 194
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + GS + D
Sbjct: 195 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEVGSVLAADGE 253
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 254 EAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 285
>gi|261380351|ref|ZP_05984924.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
gi|284796872|gb|EFC52219.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
Length = 285
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 21/268 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G++L L+ ED
Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122
+L + + ++++ +L + LR+ V+ E+ P V ++ F
Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLAVSGELADNAKPHPAAEPQLSFPAQ 121
Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ + E A ++ I G T
Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYP-WICAATKETAVAQM 180
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G
Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKIGEEEAGV 239
Query: 230 L----GVVVGKKALAIARIDKVDHAIKK 253
+ G +LA+ + + A+
Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTD 267
>gi|82702860|ref|YP_412426.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
gi|82410925|gb|ABB75034.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
Length = 348
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 65/286 (22%), Positives = 104/286 (36%), Gaps = 44/286 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I G+ A FLQ ++ D+ A + P+G+IL FLI + D +
Sbjct: 43 LSHFGLIHFWGEDAETFLQGQLSCDIRRATTSTASYGSYCNPKGRILATFLIWRTTGDGY 102
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111
++++ + +L Y LR+ V + V + H +
Sbjct: 103 LMQLPAILLAGIQKRLAMYVLRAKVKLADSSGAWVHIGVAGPHAAALLRKILGEIPVVPL 162
Query: 112 ------NSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGIVDP 156
S I R + L I D+ + L I GI
Sbjct: 163 GVRHGERGSII--RLAEDRFQLLILPEQAPTIWEDLSRNATQVGKPCWDWLEIRAGIPH- 219
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDL 213
P +D L GIS KGCY GQE+V+R Q+ I++R + DL
Sbjct: 220 ILPATQEQFVPQMVNLDTLGGISFQKGCYPGQEIVARTQYLGKIKRRMYLANVRPAAGDL 279
Query: 214 P-PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHA 250
P +G + + D+ + G+VV G LA+ + V+
Sbjct: 280 PIEAGDELFSADLGEQSAGMVVNPASSSDGGTDLLAVIQTSSVEAG 325
>gi|103486912|ref|YP_616473.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis
alaskensis RB2256]
gi|98976989|gb|ABF53140.1| glycine cleavage T protein (aminomethyl transferase) [Sphingopyxis
alaskensis RB2256]
Length = 241
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L +++ I++ G+ FLQ ++T DV + +A+LTPQGK L FLI
Sbjct: 1 MAITTLRDRALIRLSGEDVRGFLQGLVTNDVSG---NLPVWAALLTPQGKALFDFLIW-G 56
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ D +++ +R + L +L Y+LR + I +P V W E +D R
Sbjct: 57 DGDDLLIDCERDAAEGLAKRLTLYRLRRAITIAREPDLCV--HWAPEGDL---GVVDPRL 111
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R + + R+ G+ + ++ T + LNG+S
Sbjct: 112 PE---LGRRWLAPADGDEGADAAWRAHRLALGVTEGRSELGDGTTLWLECNAAELNGVSF 168
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
KGCY+GQE +R+ R + +R +++ ++
Sbjct: 169 AKGCYVGQENTARMNWRQKVNRRIVVLPLSEA 200
>gi|88812335|ref|ZP_01127585.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus
mobilis Nb-231]
gi|88790342|gb|EAR21459.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrococcus
mobilis Nb-231]
Length = 339
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ I V G A FL + ++ D+ +L AR +A +G+ L + + +
Sbjct: 37 LCALSDWGVIHVHGADAAAFLHSQLSNDIQSLDTANARLAAYCNAKGRALALLRVLRTDA 96
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSF------ 115
+L ++ DSLI +L + LRS V + ++ GV+
Sbjct: 97 -GLLLFTHKALTDSLIRRLRMFVLRSKVTLDDVSEAIGVIGLVGAAARPPLQRLMGSLPE 155
Query: 116 ------------------IDERFS--IADVLLHRTWG--HNEKIASDIKTYHELRINHGI 153
+ +RF+ + LL W N + + L I GI
Sbjct: 156 QVGGVQNADEIRLIRLDCVPDRFALVVPGRLLPELWARLANTLPVVSSEAWRLLEIRAGI 215
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
T P ++ L GIS +KGCY GQEV++R+ + +++R +
Sbjct: 216 P-TITPATQEAFVPQMLNLEPLQGISYSKGCYPGQEVIARMHYLGKLKRRMYRLHTQTAT 274
Query: 214 PPSGSPIL---TDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVRVK 265
P+ I+ T E GT+ + LA+ RI+ + + +L ++G ++
Sbjct: 275 APAPGEIVRAGTGGQEAGTVVTAAQATPESCELLAVLRIE-----LAEQNSLLLNGAPLQ 329
Query: 266 A 266
Sbjct: 330 P 330
>gi|218768283|ref|YP_002342795.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
gi|121052291|emb|CAM08620.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
Length = 288
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 104/273 (38%), Gaps = 26/273 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112
D +L + + ++ + +L + LR+ + EI V QE +
Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAF 119
Query: 113 SSFID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
++ D I + T + A + HE+R + + T
Sbjct: 120 AAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KE 176
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +GS + D
Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGSVLAAD 235
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 236 GEEAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|319410530|emb|CBY90895.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594]
Length = 288
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSN 112
D +L + + ++ + +L + LR+ V+ EI V QE +
Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPNLAF 119
Query: 113 SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++ D + L H A+ + I G T
Sbjct: 120 AAQQDSDGICSIALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVKDSENFTALAVIKFSAAQKTLSA 269
>gi|319638072|ref|ZP_07992836.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
gi|317400717|gb|EFV81374.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
Length = 285
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 103/270 (38%), Gaps = 25/270 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G++L L+ ED
Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + + ++++ +L + LR+ V+ E+ P V S + ++ + S
Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLAV--SGELADNAAPHPAVEPQLSFL 119
Query: 124 DVL----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+ + +E A ++ I G
Sbjct: 120 AQIQENTVEIALPHTGRLKISAAENASEYQAEAENAWNLHEIRSGYP-WICAATKEAAVA 178
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E
Sbjct: 179 QMLNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEA 237
Query: 228 GTL----GVVVGKKALAIARIDKVDHAIKK 253
G + G +LA+ + + A+
Sbjct: 238 GVILNTALTEQGSLSLAVIKFSAAEAALTD 267
>gi|307294356|ref|ZP_07574200.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1]
gi|306880507|gb|EFN11724.1| folate-binding protein YgfZ [Sphingobium chlorophenolicum L-1]
Length = 245
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++
Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKPGEPRWTALLTPQGKALFDFILWAD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+D +++ + ++ D+L +L Y+LR V I + + W E +D R
Sbjct: 61 GDD-VLIDCEAAQADALAKRLTIYRLRRKVAI--AREESLAVHWALEAADKP---LDPRL 114
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L HR W + R+ G+ + + I + L G+
Sbjct: 115 P---ALGHR-WIAPADGGDAAAAFRAHRLALGVFEGAGELGQDQILWLETNAGELGGVDY 170
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
KGCY+GQE +R+ +RN + +R + + +
Sbjct: 171 DKGCYVGQENTARMHYRNKVSRRLVAVPLAEA 202
>gi|297538278|ref|YP_003674047.1| folate-binding protein YgfZ [Methylotenera sp. 301]
gi|297257625|gb|ADI29470.1| folate-binding protein YgfZ [Methylotenera sp. 301]
Length = 345
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 41/285 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ +++ G A+ FLQ +T DV L A + +P+G++L F
Sbjct: 42 CDLSHLGLLEISGDDAVTFLQGQVTNDVRLLGDNHAHYTGYCSPKGRLLALFFAF-SHNQ 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------IQPINGVVLSW 104
LE+++ + + +L Y +RS V I + P V
Sbjct: 101 KLHLELNQKLLEPIAKRLKMYVMRSKVTINDVSDSTVRFGLSGNNIAELLAPFFATVPKL 160
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------YHELRINHG 152
E T + + I A + ++ G+ E+ + + + L I G
Sbjct: 161 PYESTSTENGTII-CMPNAGMPRYQIVGNTEQAKAIWQALKKDCKPVGKACWEWLEIQTG 219
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTD 211
I D P +D LN I+ KGCY GQE+V+R + +++R + +D
Sbjct: 220 IPDVYLS-TQEEFVPQMLNLDALNAINYKKGCYTGQEIVARTHYLGKVKRRTQLAHVSSD 278
Query: 212 DLPPSGSPIL-TDDIEIGTL-----GVVVGKKALAIARIDKVDHA 250
P G ++ + IG + G L R++ + A
Sbjct: 279 SCPTIGDDVVDANQQAIGKIVRCAPATDAGFVILVECRLESLALA 323
>gi|325128313|gb|EGC51197.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568]
Length = 287
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 26/271 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSF 115
+L + + ++ + +L + LR+ + EI V QE + ++
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQ 121
Query: 116 ID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
D I + T + A + HE+R + + T T
Sbjct: 122 QDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KETAV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E
Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237
Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253
G + V ALA+ + +
Sbjct: 238 TGIVLDSVQDSENFTALAVIKFSAAQKELTA 268
>gi|194740816|ref|XP_001952886.1| GF17494 [Drosophila ananassae]
gi|190625945|gb|EDV41469.1| GF17494 [Drosophila ananassae]
Length = 281
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 31/259 (11%)
Query: 40 RGSAILTPQGKILLYFLISKIEE-DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
L G++L +I + DTF++E DR L Y++R I+I ++
Sbjct: 14 CYGLFLNKSGRVLYDTIIYRTNNRDTFLVECDREASAEFRRHLRTYRVRK--SIDIDSVD 71
Query: 99 GVVLSW-------NQEHTFSNSSF---IDERFSIADVLL---------------HRTWGH 133
+W T N D R S + R
Sbjct: 72 DEYSTWVMFSPKSEPVPTSPNPDLFVSPDARLSSLGTRILAPTDMNWSQLVKGYWRNNEF 131
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ AS+ Y LR G+ + + + P FP +A D L+G+S KGCY+GQE+ +R
Sbjct: 132 SASPASEECNYQLLRYEQGVGEGSLELPPGKCFPLEANADYLHGVSFQKGCYVGQELTAR 191
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
I H +IRKR M I T + + ++G + + +A+ RI++V +
Sbjct: 192 IHHSGVIRKRYMPIRLTAPIGSNKDVTSVAGAKLGRVCGSAHNRGVALLRIEQV---LNG 248
Query: 254 GMALTVHGVRVKASFPHWY 272
L V G R A P W+
Sbjct: 249 RQELMVDGERCYADRPQWW 267
>gi|325136232|gb|EGC58840.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579]
gi|325202024|gb|ADY97478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240149]
gi|325208223|gb|ADZ03675.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
NZ-05/33]
Length = 287
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 26/271 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSF 115
+L + + ++ + +L + LR+ + EI V QE + ++
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELEASAEPLAAQEPNLAFAAQ 121
Query: 116 ID---------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
D I + T + A + HE+R + + T T
Sbjct: 122 QDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLHEIRSGYPWICAAT---KETAV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E
Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237
Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253
G + V ALA+ + +
Sbjct: 238 AGIVLDSVQDSENFTALAVIKFSAAQKELAA 268
>gi|225075688|ref|ZP_03718887.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
gi|224952959|gb|EEG34168.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
Length = 285
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G++L L+ ED
Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122
+L + + ++++ +L + LR+ V+ E P V ++ FS
Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFEPMPDLAVSGELADNAEPHPATEPQLSFSAQ 121
Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ + E A ++ I G
Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAEAENAWNLHEIRSGYP-WICAATKEAAVAQM 180
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG- 228
++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G
Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGITVKVGEEEAGI 239
Query: 229 ---TLGVVVGKKALAIARIDKVDHAIKK 253
T G +LA+ + + A+
Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTD 267
>gi|118594673|ref|ZP_01552020.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylophilales bacterium HTCC2181]
gi|118440451|gb|EAV47078.1| Glycine cleavage T protein (aminomethyl transferase)
[Methylophilales bacterium HTCC2181]
Length = 298
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 32/294 (10%)
Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+S L S I+V G+ A FLQ IT D+ + + + + P+G++L +F I K
Sbjct: 5 LSLYPLHKEFSLIEVSGEDASTFLQGQITNDINLVNETTSVYAGLCNPKGRLLAFFHILK 64
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGVVLSWNQEHTFSNS 113
+ D+F L + +++ KL Y LRS V I +Q + F +
Sbjct: 65 LH-DSFFLICPQCIAENIAKKLAMYVLRSKVVIAINTTIRLQGFEFAGEGLCDKVGFPEN 123
Query: 114 SFIDERFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHG 152
+ + F + + R G N + + + + + I +
Sbjct: 124 TNTMQSFLREGMHVTRISGINPRYLCLADNSTITTFMTAHKTHVVEKTCECWKQTSITNK 183
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGT 210
I + + P +DL+N I+ KGCY GQE+V+R + ++KR +G
Sbjct: 184 IPNIYLE-TQGKFIPQSLNLDLINAINFKKGCYTGQEIVARTHYLGTVKKRLFRGVWSGD 242
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
L G+ ILT++ +G + K+ + + ++K +AL H +R+
Sbjct: 243 KTLLNLGNEILTNETLVGQVIDYSSDKSESDILFELKVDSVKDHLALHGHSLRL 296
>gi|313668398|ref|YP_004048682.1| hypothetical protein NLA_10930 [Neisseria lactamica ST-640]
gi|313005860|emb|CBN87316.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06]
Length = 288
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
D +L + + ++ + +L + LR+ V+ EI V + + + S
Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D VL HR H A+ + I G T
Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSE-AEAGTLLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELTA 269
>gi|15676912|ref|NP_274058.1| hypothetical protein NMB1024 [Neisseria meningitidis MC58]
gi|7226264|gb|AAF41424.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|325140256|gb|EGC62781.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385]
gi|325144399|gb|EGC66701.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240013]
gi|325200291|gb|ADY95746.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
H44/76]
Length = 288
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 99/273 (36%), Gaps = 26/273 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +L + + ++ + +L + LR+ + EI V E + + +
Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELEASAEPLAAQEPSL 117
Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ VL HR H A+ + I G
Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKE 176
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTAD 235
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V AL + + +
Sbjct: 236 GEEAGIVLDSVQDSENFTALTVIKFSAAQKTLT 268
>gi|152981354|ref|YP_001353678.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
gi|151281431|gb|ABR89841.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
Length = 349
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 33/265 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++ I G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 41 APLTHLGLIAASGDDAANFLHNQLTNDVEHLGSSEARLAGYCSPKGRLLASFLYWQTA-D 99
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111
+L++ R + ++ +L + LR+ + V+L S
Sbjct: 100 RIMLQLPRELQATIQKRLQMFILRAKAKLADVSEEYVMLGIAGPAAASALMPWFPTLPVA 159
Query: 112 ---------------NSSFIDERFSIADVLLHRT--WGHNEKI--ASDIKTYHELRINHG 152
+++F R+ + W H +I AS +H I+ G
Sbjct: 160 IYGKVDNEAGTVIRHSNAFEVPRYQWITTVEQAIEAWPHLTEILQASGADAWHLAEIDGG 219
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P +LL G++ KGCY GQE+V+R Q+ +++R + + T
Sbjct: 220 VPHITA-ATQEQFVPQMINFELLGGVNFKKGCYPGQEIVARSQYLGKLKRRMLHASVTAT 278
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKK 237
G+ I + + G+VV +
Sbjct: 279 QVAPGTEIFSANDPDQPCGMVVNAE 303
>gi|241764590|ref|ZP_04762606.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
gi|241365953|gb|EER60579.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
Length = 304
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 103/291 (35%), Gaps = 32/291 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + I+V G+ A FL +T D L + AR +A L+P+G++ F+ K
Sbjct: 9 APLPHLGVIRVEGEDAAKFLHGQLTQDFALLDLQHARLAAFLSPKGRMQASFIGFKCSAT 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L R + +L + LR+ + + + S + ++ A
Sbjct: 69 EVLLICSRDLLAPTLKRLSMFVLRAKARLSDASADYALYGLAGSAIESVAGGAQPAWTKA 128
Query: 124 D-------------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
D + T D + + G+ T +
Sbjct: 129 DFGAATVVHLYPALGQPRAIWVAPATEPAPAGATLDTALWQWSDVQSGVA-TLTAPVVDA 187
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + ++G++ KGCY GQEVV+R Q R +++R I + G+ I
Sbjct: 188 FVPQMLNYESVDGVNFKKGCYPGQEVVARSQFRGTLKRRAYIAHADAPM-AVGAEIFAAS 246
Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G VV G A+ +I A++ G A GV + S
Sbjct: 247 DLEQPCGTVVQVAPAPGGGVDAIVSLQIAATQDALQVGAA---GGVPITLS 294
>gi|325982020|ref|YP_004294422.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
gi|325531539|gb|ADZ26260.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
Length = 342
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ I+ G A FLQ+ ++ D+ + +IA+ T +G+IL FL+ + +
Sbjct: 41 TDLSHRGLIQFSGDDAKNFLQSQLSCDIREISSEIAQYGGYCTSKGRILASFLLWQKNQ- 99
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVI----------IEIQPINGVVLSWNQEHTFSNS 113
+ I+++ S S I +L Y LRS V I + N VL+ + +NS
Sbjct: 100 SVIMQLPASLVASTIKRLSLYILRSKVQLTDISNACIRIGVAGPNVSVLTAEFCKSANNS 159
Query: 114 S-FIDERFSIADVLLHR------------TWGHNEKIASDIKT--YHELRINHGIVDPNT 158
ID+ S+ V +R W ++ A+ + T + L I GI
Sbjct: 160 DPVIDKEISMLHVANNRMEVITSLENAPAVWERLKQNANPVGTACWDWLDIQSGIPIILP 219
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSG 217
+ T P +D + G+S KGCY GQE+V+R Q+ +++R ++ T + +G
Sbjct: 220 E-TQETFLPQMINLDAIGGVSFKKGCYPGQEIVARTQYLGKLKRRMFLVHLTTTETIKAG 278
Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ + D+ + G +V G ALA+ + V+ +L +++K S P
Sbjct: 279 DALYSADVVDQSCGNIVNIAPSPCGGYDALAVIQQSSVNTCNIHWQSLQGPTLKIK-SLP 337
>gi|241760121|ref|ZP_04758219.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
gi|241319575|gb|EER56005.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
Length = 285
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 51/285 (17%), Positives = 103/285 (36%), Gaps = 23/285 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G++L L+ ED
Sbjct: 3 TRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRGED 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122
+L + + ++++ +L + LR+ V+ E+ P V ++ F
Sbjct: 63 -LLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLVVSGELADNAEPHPATEPQLSFPAQ 121
Query: 123 -------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ + E A ++ I G
Sbjct: 122 IQENAVEIALPHTGRLKISAAENAAEYQAGAENAWNLHEIRSGYP-WICAATKEAAVAQM 180
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
++ + KGCY GQE+++R Q+R +++ +++G D L +G + + E G
Sbjct: 181 LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSG-DSLEAAGIAVKVGEEEAGV 239
Query: 230 L----GVVVGKKALAIARIDKVDHAIK--KGMALTVHGVRVKASF 268
+ G +LA+ + + A+ G AL +
Sbjct: 240 ILNTALTEQGSLSLAVIKFSAAEAALTDADGNALKQEELFFTVEK 284
>gi|116689916|ref|YP_835539.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
gi|116648005|gb|ABK08646.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
Length = 344
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|309379187|emb|CBX22144.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 288
Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 22/272 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSF 115
D +L + + ++ I +L + LR+ V+ EI V + + +F
Sbjct: 61 GGD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAESAEPLAAQEPSLAF 119
Query: 116 IDERFSIA---DVLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
E S VL HR H A+ + I G T
Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSTV-EAGTLLAADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELTA 269
>gi|261400643|ref|ZP_05986768.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
gi|269209550|gb|EEZ76005.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
Length = 288
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVITNMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ I +L + LR+ V+ EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D VL HR H A+ + I G T
Sbjct: 120 TAECVSDGICSVVLPHRGILHIAPKNALPPYDAAAESAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E+G + V ALA+ + +
Sbjct: 238 EVGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|301155519|emb|CBW14987.1| predicted folate-dependent regulatory protein [Haemophilus
parainfluenzae T3T1]
Length = 279
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 10/244 (4%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+
Sbjct: 3 TFISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGASTLTAHCDPKGKMNSLFRLIKLS 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ F++ + ++ L D L Y + S V ++ ++ ++ E + I+
Sbjct: 63 TEQFLILMPKALLAPL-DHLKKYAVFSKVTFQV--LDWQIVGLIGEKCGRIHAQIELDID 119
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
+L + D K + I G+ + + + P + + IS
Sbjct: 120 ENRAILLNPTPLDVTFNGDEKQWLCADIQAGLPSLSAE-TQNEFIPQALNLQAIEQAISF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ +++G + P GS I T + GT+ V
Sbjct: 179 TKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEIEMQLETAWRKTGTIVSAVN 238
Query: 236 KKAL 239
+
Sbjct: 239 FDGI 242
>gi|254805066|ref|YP_003083287.1| hypothetical protein NMO_1104 [Neisseria meningitidis alpha14]
gi|254668608|emb|CBA06179.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
Length = 288
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 26/274 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +L + + ++ + +L + LR+ + EI V E + + +
Sbjct: 61 GGD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL--EASAEPLAAQEPSL 117
Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ VL HR H A+ + I G
Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKE 176
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAAD 235
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIKK 253
E G + V ALA+ + +
Sbjct: 236 GEEAGIVLDSVQDSENFTALAVIKFSAAQKTLSA 269
>gi|107028926|ref|YP_626021.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
gi|105898090|gb|ABF81048.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
Length = 344
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L A+ S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSAQLSGYCSPKGRLLASFLTWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|254490944|ref|ZP_05104126.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxidans DMS010]
gi|224463853|gb|EEF80120.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxydans DMS010]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L++ S I V G A FLQ ++T V L A+ + + +P+G++L F + K E
Sbjct: 21 ALTPLADLSIIIVSGDDAGSFLQNLLTNAVNALKPHQAQLNGLCSPKGRLLAIFQLIKRE 80
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--------- 112
+D +++ + +++ +L +KLRS V I + V N ++ ++
Sbjct: 81 QD-YLIVLPAELAEAIAQRLSMFKLRSKVDIALSDSLAAVGIINPDNKMTDLPSTTMQGS 139
Query: 113 ---------SSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ RF LL W + + + L I G+ D
Sbjct: 140 ETELGLLIKQAGQSPRFLAICEKDKTLLLSEWLTDGWQLTTQAFWQLLDIEAGVPAIFND 199
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGS 218
P ++L+ G+S KGCY GQEVV+R+ + +R + G+ +LP + +
Sbjct: 200 -SKEQFTPQQVNLELVGGVSFKKGCYPGQEVVARLHYLGSPNRRMFLARVGSGELPQANT 258
Query: 219 PILTDDIEIGTLGVVVGKK 237
P+ DD TLG VV +
Sbjct: 259 PVSDDDD--NTLGHVVQAQ 275
>gi|254247996|ref|ZP_04941317.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
gi|124872772|gb|EAY64488.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
Length = 344
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 93 HDVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGDVRDALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPIVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDNVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|325142449|gb|EGC64853.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
961-5945]
gi|325198415|gb|ADY93871.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136]
Length = 287
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFIDERF 120
+L + + ++ I +L + LR+ V+ EI V + + S +
Sbjct: 63 -LLLIMAQDLLEATIKRLRMFVLRAKVVFEILEDYAVDAELEASAEPLAAQEPSLVFTAE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D VL HR H A+ + I G T
Sbjct: 122 CVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V ALA+ + +
Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267
>gi|307109324|gb|EFN57562.1| hypothetical protein CHLNCDRAFT_143206 [Chlorella variabilis]
Length = 338
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 22/282 (7%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEE---DT 64
++ IK+ G + +PFLQ I++ DV L P + +LT QG+ L + +E T
Sbjct: 42 RTVIKLEGSNLMPFLQRIVSNDVTQLAPGGPPLYACVLTAQGRFLHDLFLHAVEGADVPT 101
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------DE 118
+ + D ++R L+D L Y L +V + V++ SS D
Sbjct: 102 VLADCDAAQRRPLMDLLQHYSLHHSVSVSNAGKAYAVMAAFGGGIAGASSAPERAWAADP 161
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R G + + Y R+ HG+ + +++ P + +D L G+
Sbjct: 162 RLPALGRRAVLPRGSAPAPTASWRDYRAWRMQHGVGEGDSEMPSGEANPLECNLDALRGL 221
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
S KGCY+GQE V+R+ R ++RKR M + D+ + + +G + VV G
Sbjct: 222 SFAKGCYVGQEGVARVHARGVVRKRLMP-SHVFDVYDADESLSA----VGRVRVVQGGLG 276
Query: 239 LAIARIDKVDHAIKKGMALTVHG-------VRVKASFPHWYK 273
LA R+ + AI++ L V G + P W++
Sbjct: 277 LATIRLQQAMAAIREEKPLLVGGLEAGSGYAEIWPWRPEWWE 318
>gi|258567086|ref|XP_002584287.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905733|gb|EEP80134.1| predicted protein [Uncinocarpus reesii 1704]
Length = 348
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISK 59
V L+N++ I + G + FLQ +I+ +V + L QG++L I
Sbjct: 57 VRLTNRALISLTGVDSTAFLQGLISQNVVTPKNRASPTTPFYAGFLNAQGRLLHDTFIYP 116
Query: 60 I------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
E +++E+D+++ +L+ +KLRS + + + + W+
Sbjct: 117 TFAPEGSNGADTGSELGYLVELDKAQVSNLMKHFKKHKLRSKLKLRALEEGEKDIWAVWD 176
Query: 106 QEHTFSNS----------SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELR 148
+ + +D R L G + + + TYH R
Sbjct: 177 NTGNWEAKDSGDVLREVLTCVDNRVPDFGHRLLLDEGSLQSSLELFPGQEASLSTYHLRR 236
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
I HG+ + + + + P D+ MD++ GI KGCY+GQE+ R HR ++RKR
Sbjct: 237 ILHGVPEGQDELVRESALPMDSNMDIMGGIDFHKGCYLGQELTIRTHHRGVVRKR 291
>gi|121634976|ref|YP_975221.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|120866682|emb|CAM10434.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|261392454|emb|CAX50003.1| putative aminomethyl transferase [Neisseria meningitidis 8013]
gi|325132534|gb|EGC55227.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190]
gi|325138308|gb|EGC60877.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
ES14902]
Length = 288
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 100/273 (36%), Gaps = 26/273 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L ++V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+D +L + + ++ + +L + LR+ + EI V + + +
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELAASAEPLAAQEPCL 117
Query: 121 SIAD----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ VL HR H A+ + I G
Sbjct: 118 AFTAECGSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLHEILSGYP-WICAATKE 176
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
T ++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D
Sbjct: 177 TAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTAD 235
Query: 224 DIEIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 236 GEETGIVLDSVKDSESFTALAVIKFSAAQKELT 268
>gi|325204265|gb|ADY99718.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240355]
Length = 287
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + + ++ + +L + LR+ + EI V E + + + + A
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAV--GAELEASAEPLAAQEPNLAFA 119
Query: 124 D-----------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
+ + A+ + I G T
Sbjct: 120 TQQDSDGICSIALPHGGILRIAPETALPPYDAAAESAWRLHEIRSGYP-WICAATKETAV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E
Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237
Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253
G + V AL + + +
Sbjct: 238 AGIVLDSVQDSENFTALTVIKFSAAQKELTA 268
>gi|73666722|ref|YP_302738.1| glycine cleavage T protein(aminomethyl transferase) [Ehrlichia
canis str. Jake]
gi|72393863|gb|AAZ68140.1| Glycine cleavage T protein(aminomethyl transferase) [Ehrlichia
canis str. Jake]
Length = 278
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 22/278 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L N+S + G A L T +VL L A S +L+P G+ + F + + E+
Sbjct: 5 IVLPNRSIVLFHGPDARQLLNRTTTNNVLNLTQNKAVYSLLLSPSGRYMYDFFVVQYEK- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114
+L+ +D +I K L YKL+S V+I + V + +E + +
Sbjct: 64 YILLDCCSIDKDEIIQKFLSYKLQSKVVIREKKHYKVGVFIGEESSSNVCGYTYCEGNTI 123
Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
F D R S + + + + A K Y LRIN+ + D N D + T FP
Sbjct: 124 FFQDPRLSTLGLRVIFDESNEALSNVNSDAERYKDYEMLRINNTVPDCNKDMIKGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
MD N I KGCYIGQEVV+R+ +R ++K+ + + + ++ D ++G
Sbjct: 184 QFRMDEFNAIDFNKGCYIGQEVVARM-YRAGVKKKIYTVISESESFD-DTKVMWDQKQVG 241
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
L VG L + I+ D+ L + ++K
Sbjct: 242 ELLSNVGNIGLCLLDINSCDNL----CDLKIGKAKIKV 275
>gi|319793763|ref|YP_004155403.1| folate-binding protein ygfz [Variovorax paradoxus EPS]
gi|315596226|gb|ADU37292.1| folate-binding protein YgfZ [Variovorax paradoxus EPS]
Length = 308
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 115/296 (38%), Gaps = 40/296 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + +
Sbjct: 10 ATLSHLGVIRAEGPDAASFLHGQLTQDFSLLGATEARLAALCTAKGRVIASFIGIRPQPE 69
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----SSFIDER 119
+ +L R + + +L Y LR+ + + +N ++ +R
Sbjct: 70 SILLVCSRDILAATLKRLSMYVLRAKAKLTDATDQFALYGLAGTALTANGLDAATPPGKR 129
Query: 120 FSI-----------ADVLLHRTW--------GHNEKIASDIKTYHELRINHGIVDPNTDF 160
+I AD + W K+ +D+ + E+R GIV T
Sbjct: 130 TAIGDDISVVSLYPADGVPRALWIAPAHHAAPAGPKLDADLWQWSEVR--SGIVTVTTPI 187
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+ P + + G++ KGCY GQE+V+R Q R +++R ++ + G +
Sbjct: 188 I-EAFVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLMQADAPV-AVGQEV 245
Query: 221 LT---DDIEIGTLGVVV-----GKKALAIARIDKVD-----HAIKKGMALTVHGVR 263
+ +GT+ G AL +I ++ G ALTV +
Sbjct: 246 FAASDGEQPVGTVAQAAQAPGGGWSALVSMQISALEAGALHAGAATGPALTVEPLP 301
>gi|316984646|gb|EFV63610.1| glycine cleavage T protein [Neisseria meningitidis H44/76]
gi|325134208|gb|EGC56857.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M13399]
gi|325206147|gb|ADZ01600.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M04-240196]
Length = 287
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 98/270 (36%), Gaps = 26/270 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + + ++ + +L + LR+ + EI V E + + + +
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGA--ELEASAEPLAAQEPSLAFT 119
Query: 124 D----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
VL HR H A+ + I G T
Sbjct: 120 AECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
++ G+ KGCY GQE+++R Q+R +++ +++G + +G+ + D E
Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSGNSAV-EAGTLLTADGEE 237
Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIK 252
G + V AL + + +
Sbjct: 238 AGIVLDSVQDSENFTALTVIKFSAAQKTLT 267
>gi|57238820|ref|YP_179956.1| hypothetical protein Erum0890 [Ehrlichia ruminantium str.
Welgevonden]
gi|58578749|ref|YP_196961.1| hypothetical protein ERWE_CDS_00850 [Ehrlichia ruminantium str.
Welgevonden]
gi|57160899|emb|CAH57804.1| putative aminomethyl transferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417375|emb|CAI26579.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 280
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+S I G L T ++L L A S +LTP G+ L F + + +
Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFVIQGSK- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114
+L+ S R+ +I+K L YKL++ V+I+ + V + +++ +
Sbjct: 64 YILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDTV 123
Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
F D R S + + + + E+ + + Y LRI++ + D N D + T FP
Sbjct: 124 FFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
M LNGI KGCYIGQEVV+R+ +R I+K I +L + + ++++ E+G
Sbjct: 184 HFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQELFEN-AKVMSNQQEVG 241
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
T+ +G L + +++ L V G +VK
Sbjct: 242 TVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVKI 275
>gi|73975454|ref|XP_539326.2| PREDICTED: similar to CG8043-PA [Canis familiaris]
Length = 276
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 23/234 (9%)
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------- 111
E F+LE D + +L L YK+R V +E P V +
Sbjct: 39 EAPAFLLECDSAVLGALQGHLALYKIRRKVKVEPCPELRVWAVLPSSPEDAGGAVPLWEQ 98
Query: 112 -NSSFIDERFSIADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPS 163
N + I R + R E +A D++ YH R G+ + D P
Sbjct: 99 ANGATILTRDPRTACMGWRLLTQEEGLALVPRGQLGDLRDYHRHRYRQGVPEGIRDLPPG 158
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----S 218
P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + LP SG +
Sbjct: 159 VALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVQLSGPLPASGITPGTT 218
Query: 219 PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++ G G LA+ R +K+ + + V V S P W+
Sbjct: 219 VLMESGQVAGKYRAGQGDVGLALLRSEKIRGPLHIRTS-ESGQVAVTVSVPDWW 271
>gi|328876509|gb|EGG24872.1| putative mitochondrial transferase [Dictyostelium fasciculatum]
Length = 398
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 73/371 (19%), Positives = 129/371 (34%), Gaps = 102/371 (27%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI----ARGSAILTPQGKILLYFLIS- 58
V L N++ ++V GK ++ FLQ + T ++ L + + L G++L ++S
Sbjct: 14 VPLKNRTLVRVSGKDSVKFLQGLTTNNLTRLSDNQNTHASIYTGFLASTGRLLFDAIVSL 73
Query: 59 ---------------------KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI 97
++I+++D + D + + L FYK+R V IE
Sbjct: 74 EKQSTTTTSTASTTAATASDSNSATHSYIVDVDSAVADKVFEHLKFYKMRDKVTIEDATQ 133
Query: 98 NGVVLSWNQ------------EHTFSNSSFI--DERFSIADVLLHRTWGHNEKI------ 137
+ V+S EH + D R + +
Sbjct: 134 HYSVMSVLDKTYKTIRNDKLFEHLEEEQCSVMMDPRHDNMGIRILVPNSKTSIAKKDLFS 193
Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
D + YH R+ +GI + D+ +T+ P + DLLNG+ KGCY+GQE+ SR
Sbjct: 194 TYSEEDEELYHLYRLQNGIPEGLKDYNYNTVIPLEYNFDLLNGVDFHKGCYLGQELTSRT 253
Query: 195 QHRNIIRKRPMIITGTD------------------------DLPPSGSPI---------- 220
+ +IRKR +T + PPS + +
Sbjct: 254 HYTGLIRKRIFPVTMKAKDEHVYPKEDHLLFSPYVLNSLNINTPPSDTELKVTMKNKGAN 313
Query: 221 --LTDDIEIG----------------TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
TD + G LA+ +++ +D K +
Sbjct: 314 SPFTDKEQDGPSPSSTPAPSAGRSTEKFISGRQNVGLAMIKVEHIDAGDFKHTIIKDKES 373
Query: 263 R-VKASFPHWY 272
R ++ P W+
Sbjct: 374 RQLQLLEPCWW 384
>gi|325579260|ref|ZP_08149216.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392]
gi|325159495|gb|EGC71629.1| folate-binding protein YgfZ [Haemophilus parainfluenzae ATCC 33392]
Length = 279
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L++ ++V G A +LQ +T DV+ L + +A P+GK+ F + K+
Sbjct: 3 TFISLNHYDLVEVAGVDAEKYLQGQLTCDVVHLAAGTSTLTAHCDPKGKMNSLFRLIKLS 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ F++ + ++ L D L Y + S V ++ ++ ++ E + I+
Sbjct: 63 AEQFLILMPKALLAPL-DHLKKYAVFSKVTFQV--LDWQIVGLIGEKCGRIHAQIELDID 119
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
+L + D K + I G+ + + + P + + IS
Sbjct: 120 ENRAILINPTSLDVTFNGDDKQWLCADIQAGLPSLSAE-TQNEFIPQALNLQAIEQAISF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI 220
TKGCYIGQE V+R ++R ++ +++G + P GS I
Sbjct: 179 TKGCYIGQETVARAKYRGANKRAMYVLSGETTVTPKIGSEI 219
>gi|30249485|ref|NP_841555.1| glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
gi|30138848|emb|CAD85425.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
Length = 348
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 33/266 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ I+ G+ A FLQ ++ DV ++ A TP+G++L FL+ + +
Sbjct: 40 LIDLSHFGLIRFSGEDAQNFLQGQLSCDVRSVDSTQASHGGYCTPKGRLLGSFLLWQDSD 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------------- 106
+++++++ + +++ +L + LR+ V I+ + + +
Sbjct: 100 NSYLMQLPAERVETITRRLKMFVLRAKVSIQDNTDDLIRIGIAGKNALLSLQNMLPDTTI 159
Query: 107 -EHTFSNSSFID--------ERFSIADVLLHR--TWGHNEKIA--SDIKTYHELRINHGI 153
+ +S D RF I + W K A + + L I GI
Sbjct: 160 SPAPLAVTSIPDGQIICHSENRFEIMTTSIQAPSLWEQLNKQAHCAGAAIWDWLEIREGI 219
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P +D++ G+S KGCY GQE+V+R ++ +++R + D
Sbjct: 220 P-AIFNATQEQFIPQMINLDIIGGVSFKKGCYPGQEIVARTEYLGKVKRRMYLAHLDADS 278
Query: 214 ---PPSGSPILTDDIEIGTLGVVVGK 236
+G + D G++
Sbjct: 279 CQNIAAGDSLFGTDTGDQACGMIANA 304
>gi|206560330|ref|YP_002231094.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
gi|198036371|emb|CAR52267.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
Length = 344
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 102/281 (36%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
+L + + + ++ +L + LR+
Sbjct: 93 HGVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDANDTLAVAGFAGDVRDALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALAGTLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|325130373|gb|EGC53139.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
OX99.30304]
Length = 287
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 26/271 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++V G+ FL ++ D+ L A + TP+G+++ ++ D
Sbjct: 3 TLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVIANMIVVNRGGD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + + ++ + +L + LR+ + EI V E + + + +
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAV--GAELEASAEPLAAQEPSLAFT 119
Query: 124 D----------VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
VL HR H A+ + I G T
Sbjct: 120 AECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLHEIRSGYP-WICAATKETAV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E
Sbjct: 179 AQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLAADGEE 237
Query: 227 IGTLGVVVGKK----ALAIARIDKVDHAIKK 253
G + V ALA+ + +
Sbjct: 238 AGIVLDSVKDSESFTALAVIKFSAAQKELTA 268
>gi|124267051|ref|YP_001021055.1| hypothetical protein Mpe_A1862 [Methylibium petroleiphilum PM1]
gi|124259826|gb|ABM94820.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 323
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 38/284 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + I+ G A FL +T D+ L AR +A +P+G++L F+ K
Sbjct: 15 AVRLLHSGVIRAAGADAASFLHGQLTNDMTGLGLGEARLAAYCSPKGRMLASFVAFKRSH 74
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118
D L + + +L + LR+ + + V++ + + +
Sbjct: 75 DEIWLACRSDVLPATLKRLRMFVLRAKAQLSEGGDDAVLVGLAGRSAAAWLAQVLPAAVN 134
Query: 119 -----RFSIADVLLHRTWG-------------------HNEKIASDIKTYHELRINHGIV 154
R ++ D LL R N A ++ + L ++ G+
Sbjct: 135 GAVWSRHALDDALLVRLPDGAGQARWLWAGPAAQTDAVLNALPALALERWDWLEVHSGVA 194
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
P P +L+ G++ KGCY GQE+V+R Q+R I++R ++ G
Sbjct: 195 -PIVANTVEAFVPQMLNYELVGGVNFQKGCYPGQEIVARSQYRGTIKRRAALVHGDAAAL 253
Query: 215 PSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHA 250
P G + + G++ G AL ++ +D
Sbjct: 254 P-GQEVFWSGDDAQPSGLIALAAPAPGGGWDALVELKLSALDDG 296
>gi|34496817|ref|NP_901032.1| hypothetical protein CV_1362 [Chromobacterium violaceum ATCC 12472]
gi|34102672|gb|AAQ59037.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 344
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 38/302 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L N + I+V G+ A FLQ ++ D+ + + A+ S T +G++L FLI + +
Sbjct: 40 LAPLDNFALIRVEGEDAAAFLQGQLSNDIREVTTERAQYSTYSTAKGRMLASFLIW-LRD 98
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII------EIQPINGVVLSWNQEHTFSNSSFI 116
+ L + +++ +L + LRS V + + ++G+ + F ++
Sbjct: 99 GAYYLMVSADIAETVAKRLTMFVLRSKVKVVLDREWSLLGVSGIAIEQALHKHFPGAAGA 158
Query: 117 DE---RFSIADVLLHRTWG-------HNEKIASDI-----------KTYHELRINHGIVD 155
+E F +LL G I D+ + + I GI
Sbjct: 159 EEMRVAFQSEGILLALPSGGYLLAERDGGGIGKDLAQMEGLEAALPEAWAWKDIQAGIA- 217
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T P A M+L+ ++ KGCY GQE+V+R Q+ +++R ++ LP
Sbjct: 218 WVTQATQEQFVPQMANMELIGAVNFKKGCYPGQEIVARSQYLGKMKRRMFKVSFDAALP- 276
Query: 216 SGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G+ + + D IG L LA+A+ + I T+ R++
Sbjct: 277 VGAKLYSPQLPDQSIGMLASECRVGENAYLGLAVAQSQTWEAGIFADEGHTIALRRLELP 336
Query: 268 FP 269
+P
Sbjct: 337 YP 338
>gi|194289602|ref|YP_002005509.1| aminomethyl transferase [Cupriavidus taiwanensis LMG 19424]
gi|193223437|emb|CAQ69442.1| putative aminomethyl transferase [Cupriavidus taiwanensis LMG
19424]
Length = 341
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 43/300 (14%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++V G A FL +T V L AR + +P+G++L FL+ + + D +L+
Sbjct: 30 LGLVRVAGDDAASFLHTQLTNAVDDLAPGTARLAGYCSPKGRLLATFLMWR-DADGIVLQ 88
Query: 69 IDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV----LSWNQEHTFSNSSFIDERFSIA 123
+ + ++ +L + LR+ + +I P + ++ +Q + + F++A
Sbjct: 89 LSAEIQAAVQKRLSMFVLRAKAKLSDITPAHAILGVAGAGASQALGAAGLPAPEAPFAVA 148
Query: 124 DVLLH--------------------------RTWGHNEKIASDIKTYHELRINHGIVDPN 157
R + + L + G+
Sbjct: 149 GADGVTVIRLPDSAGQPRWQLVLPAERADAVRAALSATLTGAAPALWDWLEVQSGLPRIV 208
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
P +L+ G++ KGCY GQEVV+R Q+R +++R ++ G ++P
Sbjct: 209 A-ATQEQFVPQMINFELVGGVNFRKGCYPGQEVVARSQYRGTLKRRMWLVQGEGEVPAPA 267
Query: 218 SPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ I + G++V G LA +ID A++ G A A+ P
Sbjct: 268 AEIYRPEDPGQPCGMIVNAAPAPDGGWAGLAELKIDAAGSALRLGSAEGA--AVATANLP 325
>gi|168027952|ref|XP_001766493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682402|gb|EDQ68821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 67/349 (19%), Positives = 115/349 (32%), Gaps = 83/349 (23%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIAR--------------GSAILTPQ 48
L + I G I FLQ ++T DV L P +A+L Q
Sbjct: 65 LKTRRVISFDGPDVIDFLQGLVTNDVSKLVREPSGETPTPSPNAPLVYQPPLYAAMLNSQ 124
Query: 49 GKILLYFLISKIEED------------------TFILEIDRSKRDSLIDKLLFYKLRSNV 90
G+ L + K + ++D D +I L + LR +
Sbjct: 125 GRFLYDLFLYKPSAGAEKLDRSGSGPGKSKDTPELLADVDAGLVDEIIGYLKKHILRKKI 184
Query: 91 IIEIQPIN--------GVVLSWNQEHTFSNSSFI-------------------------D 117
++ + G + T S + I D
Sbjct: 185 EVKDVSKDFSVWQHYGGTLAEKPDNTTESEAGAIGWGGTKDESALRSSETSGDEWLWYKD 244
Query: 118 ERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
R S + + + + Y R+ G+ + +T+ P + +
Sbjct: 245 PRLSTLGLRGVFSTSALPPLVEAGTKVEEDYYLLWRMEQGVAEGSTEIPKGEAIPLEYNL 304
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-------TDDLPPSGSPIL--TD 223
LN I KGCY+GQE+V+R HR +IRKR M + D G+ ++
Sbjct: 305 AGLNAIDFNKGCYVGQELVARTHHRGVIRKRVMPLNFVQANGEEAQDAVTPGADVVDKKA 364
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
++G + V+G + L + R+ + + + VKA P W+
Sbjct: 365 GKKVGKVTTVLGPRGLGLIRLASASDGSELCIE-NQEDIHVKAVRPKWW 412
>gi|90021900|ref|YP_527727.1| TonB-dependent receptor [Saccharophagus degradans 2-40]
gi|89951500|gb|ABD81515.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharophagus degradans 2-40]
Length = 322
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ L + I+V G A FLQ T D ++ A +G+++ F +K+
Sbjct: 24 AIPLLDHVLIEVKGPDAEKFLQGQCTCDFKSIANGKFSLGAHCNVKGRMVSSFTAAKLGP 83
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108
+ F L +S + + L Y + S V +EI V +N +
Sbjct: 84 EHFGLRTHKSNAEKALATLKKYAVFSKVSLEISSSLAAVAVFNTQANEVPFFNATAEVGC 143
Query: 109 --TFSNSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + S+ ++ L R + + + I G+ + D
Sbjct: 144 STALEQGACLAHTNSMQELWLARENIQQLLEQLPVAAPHYWTAYNIAQGVAEVTAD-STE 202
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITGTDDLPPSGSPIL 221
+ P + + LL G+S KGCY GQE+V+R+ ++ ++K + + P +G+ ++
Sbjct: 203 QLIPQEINLQLLGGVSFNKGCYTGQEIVARMHYKATLKKHMYRAQLAPSTSAPATGTALI 262
Query: 222 TDDIE-----IGTLGVVVGKKALAIARIDKVDHA 250
++ + + ++ G + LA+ +D H+
Sbjct: 263 NEEGKNVGQVVQSVTTDAGAQILAL-TLDTAAHS 295
>gi|326316630|ref|YP_004234302.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373466|gb|ADX45735.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 304
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 100/280 (35%), Gaps = 23/280 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ + +
Sbjct: 8 LAPLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRAGD 67
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L R +++ +L + LR+ + + + + + + +S
Sbjct: 68 AEVLLVCSRDVLATVLKRLSMFVLRAKARLSDATADFALWGLAGDTVAAVAGEALPPWSR 127
Query: 123 ADVL------LHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPS 163
D LH G + + + + G+ +
Sbjct: 128 QDTPQGTVVHLHPGAGQPRALLAQPAGQPAPAGPALAPGLWEWGEVQSGVPTLTAPLV-E 186
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + + G++ KGCY GQEVV+R Q R +++R + + + G+ +
Sbjct: 187 LFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPEPI-AVGAEVFAA 245
Query: 224 DIEIGTLGVVVGKKALAIARIDK--VDHAIKKGMALTVHG 261
G VV A D G AL V G
Sbjct: 246 SDAEQPCGTVVQAAAAPGGGFDALVALQVASTGEALRVGG 285
>gi|260797663|ref|XP_002593821.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae]
gi|229279051|gb|EEN49832.1| hypothetical protein BRAFLDRAFT_75719 [Branchiostoma floridae]
Length = 255
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 18/241 (7%)
Query: 49 GKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL 102
G++L L+ ++ + + +LE D + SLI L YK+R V I + V
Sbjct: 9 GRVLYDILMYNLQSNPDSPPSLLLECDHTAVPSLIKLLKMYKIRKKVDICSVADEYTVWA 68
Query: 103 SWNQEHTFS------NSSFIDERFSIADVLLHRTWGHN---EKIASDIKTYHELRINHGI 153
S ID R + G N + + + YH R G+
Sbjct: 69 LLPGTSDPPVFVSDTGLSVIDPRLPDLGNRVVLKSGTNLVFDCVEGTSEDYHTHRYQLGV 128
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P + + LNG+S KGCY+GQE+ +R H +IRKR M +T
Sbjct: 129 GEGVNDLPTGNCTPLECNLAFLNGVSFDKGCYVGQELTARTHHTGVIRKRLMPVTLDRPA 188
Query: 214 P-PSGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+GS + + +G G +A+ R+ + + V +KA P W
Sbjct: 189 SLEAGSTLTNEKGKNVGKFRHAQGVHGIALVRLAHSQEKLYCKQD-SGEEVGLKAETPKW 247
Query: 272 Y 272
+
Sbjct: 248 W 248
>gi|58616809|ref|YP_196008.1| hypothetical protein ERGA_CDS_00820 [Ehrlichia ruminantium str.
Gardel]
gi|58416421|emb|CAI27534.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 280
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 22/278 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N+S I G L T ++L L A S +LTP G+ L F + + +
Sbjct: 5 VILPNRSVIMFHGLDCKQLLNRTTTNNILNLANNKAIYSLLLTPNGRYLYDFFVIQGSK- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114
+L+ S R+ +I+K L YKL++ V+I+ + V + +++ +
Sbjct: 64 YILLDCHSSDREGIIEKFLLYKLQAKVVIKKKTQYKVGVFVGEQYNKYKAGYTYYENDTV 123
Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
F D R S + + + + E+ + + Y LRI++ + D N D + T FP
Sbjct: 124 FFQDPRLSKLGLRVIFHESNELFSLEEEALGNYENYEMLRISNTVPDCNKDMIRGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
M LNGI KGCYIGQEVV+R+ +R I+K I L + + ++++ E+G
Sbjct: 184 HFRMQQLNGIDFNKGCYIGQEVVARM-YRAGIKKNIYTIISEQKLFEN-AKVMSNQQEVG 241
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
T+ +G L + +++ L V G +VK
Sbjct: 242 TVLSYIGNIGLCLLNTSSINNL----SDLRVEGSQVKI 275
>gi|134295923|ref|YP_001119658.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
gi|134139080|gb|ABO54823.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
Length = 344
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 61/301 (20%), Positives = 111/301 (36%), Gaps = 42/301 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L+ I V G A FL +T D+ L AR + +P+G++L FL +
Sbjct: 33 ACMPLAQFGVIDVAGDDAATFLHGQLTNDIEHLDAASARVAGYCSPKGRLLASFLAWREG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
+L + + + ++ +L + LR+
Sbjct: 93 HGVRLL-VSKDVQAAVQKRLSMFVLRAKAKLSDASDAVAVVGFSGDVRDALSGVFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ GV++ +I R + D + G ++ + + L
Sbjct: 152 GVHVKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALAGTLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G T + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ G D +G + D G++V A +D + K AL V V A
Sbjct: 268 VAGETDSVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDALVE--IKLAALDSGSVHVGA 325
Query: 267 S 267
+
Sbjct: 326 A 326
>gi|149926475|ref|ZP_01914736.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter
sp. MED105]
gi|149824838|gb|EDM84052.1| glycine cleavage T protein (aminomethyl transferase) [Limnobacter
sp. MED105]
Length = 350
Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats.
Identities = 62/292 (21%), Positives = 114/292 (39%), Gaps = 25/292 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS+ +LS I V G A+ FLQ+ ++ DV + R + + T +G++L F + +
Sbjct: 51 MSAQFLSRWGVIGVDGDDAVTFLQSQLSNDVAGMAESQLRMAGLCTAKGRLLGSFFVLRH 110
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------------WNQE 107
+ F++ + +L+ +L + LRS + + + W+++
Sbjct: 111 GKQVFLV-CRQETVTALVKRLSMFVLRSKCKVRDCTADYQLAFVPDSGPTSPMRVQWDEQ 169
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
T + +S S L G E+ ++ + GI + P
Sbjct: 170 GTAT-ASLRALNGSTPGFQLVVGNGKTEQSSAADDQFEFALQQLGIAY-VSQPTVEMFIP 227
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTDDIE 226
DL+ G+S +KGCY GQE+V+R + +++R T T L +G + E
Sbjct: 228 QAINFDLVGGVSFSKGCYPGQEIVARSHYLGKVKRRVFQATATGSLTVTAGQDVWLAGKE 287
Query: 227 ---IGTLGVVVGKKALAIARID-KVDHAIKKGMALTVHG----VRVKASFPH 270
G + V ++ VD A + G TV + + P
Sbjct: 288 NEPAGAVATAVNFNGQQYLLVELPVDDAEQSGAIFTVKNDAGAIALNVQPPP 339
>gi|254252183|ref|ZP_04945501.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
gi|124894792|gb|EAY68672.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
Length = 344
Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 40/270 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 93 HDVRLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDTLSRIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ GV++ +I R + D + ++ + + L
Sbjct: 152 GVHVKVDGPAGVLIRVPDAAGRKRYLWIGPRAEV-DARIAALGDALPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G T P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPR-ITQPTVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
+ G D+ +G + D G++V
Sbjct: 268 VAGETDVAHAGVELFHGDDPGQPCGMIVNA 297
>gi|298368398|ref|ZP_06979716.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282401|gb|EFI23888.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
Length = 300
Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 104/268 (38%), Gaps = 21/268 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + ++V G+ F+ ++ D+ L A + TP+G++L L+ D
Sbjct: 17 TRLPFFAIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRVLANMLVLNRGSD 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L + ++++ +L + LR+ V+ E P ++ ++ F A
Sbjct: 77 -LLLVMAADLTEAIVKRLRMFVLRAKVVFEPLPDYAAAAVLDENTEAHAAAEPSLSFPAA 135
Query: 124 DVLLHRT----------WGHNEKI----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ T G E++ A+ ++ I G + T
Sbjct: 136 EENGVWTVSLPHTGRLKIGEAERLPEHDAAAENAWNLHEIRSGYA-WISAATKETAVAQM 194
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
++ G+ KGCY GQE+++R Q+R +++ +++G L +G +L + E G
Sbjct: 195 LNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-GSLEAAGIAVLENGAEAGQ 253
Query: 230 L----GVVVGKKALAIARIDKVDHAIKK 253
+ G +LA+ + +
Sbjct: 254 IINTALTDTGSLSLAVIKHAAAQAVLTD 281
>gi|268684583|ref|ZP_06151445.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268624867|gb|EEZ57267.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 288
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|77165932|ref|YP_344457.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|254434606|ref|ZP_05048114.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
gi|76884246|gb|ABA58927.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|207090939|gb|EDZ68210.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
Length = 347
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 63/304 (20%), Positives = 118/304 (38%), Gaps = 45/304 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I + G+ A FLQ ++T DV + + ++ + + P+G++L F + + +
Sbjct: 41 TDLSHFGLIAISGEDASDFLQNLLTNDVKEVNSQRSQLTGLCNPKGRLLAIFRLFQWNAN 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------------QPINGVVLSWNQEH 108
F L + S ++++ +L Y LR+ V + L
Sbjct: 101 -FYLSLPHSLLEAVLKRLNMYVLRAQVSLADVSDHFCRFGLVGSQASDELKRYLGKAPMT 159
Query: 109 TFSNSSFID----------ERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154
T D RF + + L + WG K + + + I G+
Sbjct: 160 TNEVQQAPDCCILRVPGEPSRFEVVGGMNTLQKFWGELTKTVTPVGANFWELTTIRAGVA 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213
+ ++ P ++L G+S TKGCY GQEV++R+ +R +R + TD
Sbjct: 220 TIYPE-TQASFIPQQVNLELREGVSFTKGCYPGQEVIARMHYRGKPSRRMFLAHISTDQQ 278
Query: 214 PPSGSPILTDDIEI----GTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
P G P+ + E G + G +L + ++ ++KG + G
Sbjct: 279 PQPGDPVYLANDEARQARGEIVAAQLAPEGGYDSLVVLQLSH----LQKGDMMWNGGNGA 334
Query: 265 KASF 268
K +
Sbjct: 335 KLTL 338
>gi|315635020|ref|ZP_07890301.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393]
gi|315476282|gb|EFU67033.1| folate-binding protein YgfZ [Aggregatibacter segnis ATCC 33393]
Length = 304
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 16/266 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++ S I++ G A +LQ +T DV L + +A P+GK+ F + + +E
Sbjct: 24 CPLTHYSLIEIVGTDAEKYLQGQLTCDVTKLAVGESTLTAHCDPKGKMSALFRLIRQDEQ 83
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
TF + + + S +D+L Y + S V + + + + R I
Sbjct: 84 TFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRIDIN 143
Query: 124 D-----VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNG 177
+LL+ T+ E + + L I G+ P + +
Sbjct: 144 GQQPRVILLNPTYLALEPTVE-AEAWDLLDIQDGVP-GLAAATQLEFIPQALNLQSVEQA 201
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI---LTDD-IEIGTLGV 232
IS KGCYIGQE V+R ++R ++ I T LP GS + L D+ GT+
Sbjct: 202 ISFHKGCYIGQETVARAKYRGANKRALFIFAARTQSLPEIGSALEMALGDNWRATGTITS 261
Query: 233 VVGKKALAIARIDKV-DHAIKKGMAL 257
V + + V + +++G A
Sbjct: 262 AVNFHG--VLWLQAVLNTPLEEGQAF 285
>gi|240016314|ref|ZP_04722854.1| hypothetical protein NgonFA_03954 [Neisseria gonorrhoeae FA6140]
gi|254493985|ref|ZP_05107156.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|260440231|ref|ZP_05794047.1| hypothetical protein NgonDG_03921 [Neisseria gonorrhoeae DGI2]
gi|268595045|ref|ZP_06129212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268596575|ref|ZP_06130742.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268601621|ref|ZP_06135788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268603962|ref|ZP_06138129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682425|ref|ZP_06149287.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291043527|ref|ZP_06569243.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|226513025|gb|EEH62370.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268548434|gb|EEZ43852.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268550363|gb|EEZ45382.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268585752|gb|EEZ50428.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588093|gb|EEZ52769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268622709|gb|EEZ55109.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291011990|gb|EFE03979.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|317164506|gb|ADV08047.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 288
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|194098941|ref|YP_002002006.1| hypothetical protein NGK_1381 [Neisseria gonorrhoeae NCCP11945]
gi|193934231|gb|ACF30055.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
Length = 288
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|59800982|ref|YP_207694.1| hypothetical protein NGO0548 [Neisseria gonorrhoeae FA 1090]
gi|293398842|ref|ZP_06643007.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
gi|59717877|gb|AAW89282.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291610256|gb|EFF39366.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
Length = 288
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|268686893|ref|ZP_06153755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627177|gb|EEZ59577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 288
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V ALA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTALAVIKFSAAQKELT 268
>gi|238021253|ref|ZP_04601679.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
gi|237868233|gb|EEP69239.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
Length = 285
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 99/273 (36%), Gaps = 15/273 (5%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L + I+ G A FL + D+ LP A + TP+G+++ LI++
Sbjct: 1 MHTTQLPFFAVIRATGDDAADFLHNQFSNDIKNLPANQACYATYNTPKGRVIAN-LIAQN 59
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +L + ++++ +L Y LR+ V EI P GV S + S F
Sbjct: 60 TGNEILLALAADLVEAVVKRLKMYVLRAKVQFEILPDWGVAGSLKSNTPPQHPSEPQLSF 119
Query: 121 SI---ADVLLHRTWGHNEKIASDIK--------TYHELRINHGIVDPNTDFLPSTIFPHD 169
+ ++ L T +++ + + I G +
Sbjct: 120 PVNAQGEIQLPHTGSLKIAPCAELPAYDAAAEAAWQQHEILSGYP-WICAATSESCVAQM 178
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+ G+ KGCY GQEV++R Q+R +++ I T E G
Sbjct: 179 LNQHTIGGVHFRKGCYPGQEVIARAQYRGQVKRGLAIATSPAAQSAGAIVQYEAGAEAGI 238
Query: 230 LGVVVGKKALAIARIDKVDHAIK--KGMALTVH 260
+ G L + + ++ G A V
Sbjct: 239 VINTSGSLNLLVIKHSAAHSPLRDAAGNAFAVQ 271
>gi|70997319|ref|XP_753409.1| aminomethyl transferase [Aspergillus fumigatus Af293]
gi|74673542|sp|Q4WVK5|CAF17_ASPFU RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|66851045|gb|EAL91371.1| aminomethyl transferase, putative [Aspergillus fumigatus Af293]
gi|159126864|gb|EDP51980.1| aminomethyl transferase, putative [Aspergillus fumigatus A1163]
Length = 447
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 76/364 (20%), Positives = 127/364 (34%), Gaps = 93/364 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT D + +A L QG++L
Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLIANDPRRATRRTGTYTAFLNSQGRVLNDAF 104
Query: 57 ISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104
I + +++E+D+++ SL+ L +KLRS + + V SW
Sbjct: 105 IYPMPKGDSETDTTGDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSW 164
Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137
+++ ID R L + ++
Sbjct: 165 KDHAEPRWAAYNLESESSSPFAPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQV 224
Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R
Sbjct: 225 AGSQVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRT 284
Query: 195 QHRNIIRKRPMII------------------TGTDDLPPSGSPILT----DDIEIGTLGV 232
H ++RKR + + + LPPSGS I G
Sbjct: 285 HHTGVVRKRIVPVQLYANSAPQSGDTPVYDPSAAVALPPSGSNISKVDGRKGRSAGKFLG 344
Query: 233 VVGKKALAIARIDKVDHAIKKG-----------------------MALTVHGVRVKASFP 269
VG LA+ R++ + + G A V+VKA P
Sbjct: 345 GVGNIGLALCRLEIMTDIVLTGEGSHYSPEQEFKISWSAPEEGSSSATEPGEVKVKALVP 404
Query: 270 HWYK 273
W +
Sbjct: 405 PWLR 408
>gi|326921387|ref|XP_003206941.1| PREDICTED: putative transferase C1orf69, mitochondrial-like
[Meleagris gallopavo]
Length = 248
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 29/237 (12%)
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
EE +LE D S D++ L YK+R V I + E S
Sbjct: 10 EEPHILLECDSSVLDAVQKHLKLYKIRRKVSISPCLDLSLWAVIPGEQAGDISGSLAQYA 69
Query: 115 ------FIDERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIVDPNTDFLP 162
D R + L G N +I+ YH R GI + D P
Sbjct: 70 ERALVLTPDPRAEVMGWRLIVKAGANLPEVIPGSRIENIQDYHRHRYKQGIPEGVKDLPP 129
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP----PSGS 218
P ++ + +NG+S TKGCYIGQE+ +R H +IRKR + + + LP P G+
Sbjct: 130 GVPLPLESNLAYMNGVSFTKGCYIGQELTARTHHMGVIRKRLVPVQFSVPLPQESIPEGA 189
Query: 219 PILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG--VRVKASFPHWY 272
ILT+ G + +A+ R+ ++ + L V G V++ AS P W+
Sbjct: 190 EILTETGKAAGKFRAGGDELGIALLRLANINEPL----CLNVAGNKVKLTASIPEWW 242
>gi|307211751|gb|EFN87746.1| Putative transferase C1orf69, mitochondrial [Harpegnathos saltator]
Length = 304
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 65/294 (22%), Positives = 108/294 (36%), Gaps = 56/294 (19%)
Query: 31 VLTLPYKIA-RGSAILTPQGKILLYFLISKIEEDT-FILEIDRSKRDSLIDKLLFYKLRS 88
+ L + + L +G++L +I K E+ + + LE D +SL L Y+++
Sbjct: 1 MKHLEEGASNIYTLFLNVKGRVLYDAIIYKSEKSSSYYLECDSQIAESLQRHLRLYRVKR 60
Query: 89 NVIIE-IQPINGVVLSWNQEHTFSNSS--------------------------------- 114
+ +E + ++ F + S
Sbjct: 61 KIDVEHTGDKINIWTMFDSSSRFDHGSAALDENGKRKVEGMIFPCGTLNNKASKFVDNIM 120
Query: 115 -FIDERFSIADVLL--------HRTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLP 162
F D R + + H H + + + Y R G+ + D P
Sbjct: 121 IFEDPRLPDLGLRILAESHIGTHDIIKHLDDDVISSENASDYRAFRYKLGVGEGVQDLPP 180
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGSPI 220
P + D L+G+S KGCYIGQE+ +R H ++RKR M +T + D P S
Sbjct: 181 GKALPLEINCDYLHGVSFHKGCYIGQELTARTYHTGVVRKRLMPLTFENIADKPLSYDEK 240
Query: 221 LTD--DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ D +G K L + RI++ A L V GV VK + P W+
Sbjct: 241 ILDQSGNVVGKFRGYTEKHGLGLMRINESLSA----QQLNVAGVNVKVTKPAWW 290
>gi|239815836|ref|YP_002944746.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
gi|239802413|gb|ACS19480.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
Length = 308
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 36/292 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+ G A FL +T D L AR +A+ T +G+++ F+ + + +
Sbjct: 12 LSDLGVIRAEGPDAASFLHGQLTQDFALLGATEARLAALCTAKGRVIASFVGIRPQPELV 71
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS----SFIDERFS 121
+L R + + +L Y LR+ + + +N + +R +
Sbjct: 72 LLVCSRDILAATLKRLSMYVLRAKAKLTDATEQFALYGLAGTALAANGLDATALPGQRTA 131
Query: 122 I-----------ADVLLHRTW------GHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
I AD + W A D + + + GIV T +
Sbjct: 132 IGQDISAVSLYPADGVPRAMWIAPAGSPAPAGPALDAQLWQWSEVRSGIV-TVTTPVVEA 190
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + + G++ KGCY GQE+V+R Q R +++R ++ L +G +
Sbjct: 191 FVPQMINYESVGGVNFKKGCYPGQEIVARSQFRGTLKRRTYLVQADAPL-GAGQEVFAAG 249
Query: 225 IEIGTLGVVV--------GKKALAIARIDKVD-----HAIKKGMALTVHGVR 263
+G V G AL +I ++ G ALTV +
Sbjct: 250 DAEQPVGTVAQAAPAPGGGWAALISIQISALETGGLHAGSADGPALTVEPLP 301
>gi|254283511|ref|ZP_04958479.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B]
gi|219679714|gb|EED36063.1| glycine cleavage T-protein [gamma proteobacterium NOR51-B]
Length = 289
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 17/281 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S YL ++ +++ G A+ FLQ +AD + +G++L FL K+
Sbjct: 10 LSLAYLDQEAVLELTGPDAVSFLQGQSSADFSGSDTQKPILGTFCNVKGRVLADFLAFKV 69
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSN---------VIIEIQPINGVVLSWNQEHTFS 111
++ +L + D+LI L Y S V I +G ++ ++E +
Sbjct: 70 SDERILLRCEGQVGDALITHLQPYLNFSKSTLRRCEGVVYGGIGDQDGSNVTSSEEARDA 129
Query: 112 NSSFIDERFSIADVLLHRT--WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
F RFS A H +++D+ +R + T P D
Sbjct: 130 GEWFAIPRFSGATEFWHLGDHPAAATTVSADMWYSEMMRNEDARITGAT---IGKYLPQD 186
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDD--IE 226
DL IS +KGCY GQE+++R+ ++ ++R T T + GS ++ D
Sbjct: 187 LNYDLRGYISFSKGCYTGQEIIARLHYKGKPKRRLYRATCTAESDCAPGSDLIVGDQGKA 246
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G++ + I+ +++A + L ++A
Sbjct: 247 AGSVVNCASAAGVKYLLIETIENAFDDQLRLADCNTPLQAI 287
>gi|222634911|gb|EEE65043.1| hypothetical protein OsJ_20031 [Oryza sativa Japonica Group]
Length = 596
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 59/286 (20%)
Query: 41 GSAILTPQGKILLYFLISKIEEDTFILE------------------------------ID 70
+A+LTPQG+ L + + + +L+ +D
Sbjct: 301 YAALLTPQGRFLYDLFLYRPPPPSQLLDRTGSAPLTGERPKGNQEDEGEDEPGEVLADVD 360
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----EHTFSNSSFIDERFSIADV 125
++ D L+ Y+LRS V I+ ++ L W + EHT ++ + +
Sbjct: 361 AAEVDELLACFKRYRLRSKVEIDN--VSKEFLCWQRFGRNVEHTGPSTQEPEAQSIGWGQ 418
Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ + +D + Y RI +G+ + +T+ P + LN I
Sbjct: 419 GVDHAAESAAQAPLVESDKEADERHYLLWRIENGVAEGSTEIPKGEAIPLEYNFAGLNAI 478
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------LPPSGSPILT--DDIEIGT 229
S KGCYIGQE+++R HR +IRKR M + D+ GS ++ +IGT
Sbjct: 479 SFEKGCYIGQELIARTHHRGVIRKRLMPLIFEDENGQELKQAVAPGSEVVDKESGKKIGT 538
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVH---GVRVKASFPHWY 272
+ +G + + + R++ A+K+ +L + VRVKA P W+
Sbjct: 539 VNTALGSRGMGLLRLE---EALKQNSSLAIKDNRDVRVKAIKPDWW 581
>gi|170733254|ref|YP_001765201.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
gi|169816496|gb|ACA91079.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 93/275 (33%), Gaps = 34/275 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 2 PLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------ 118
+L + + + ++ +L + LR+ + V + + S D
Sbjct: 62 RLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVAGFAGNVRDALSGIFDALPDGVH 120
Query: 119 -----------RFSIADVLLHRTW-------------GHNEKIASDIKTYHELRINHGIV 154
R A W + L + G
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEVDARLAALAGALPVVSPAVWDWLDVRAGEP 180
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212
+ P D++ ++ KGCY GQEVV+R Q+R I++R + G D
Sbjct: 181 RITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAGETD 239
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+G + D G++V A +D +
Sbjct: 240 TVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|89901035|ref|YP_523506.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
gi|89345772|gb|ABD69975.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
Length = 317
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 92/259 (35%), Gaps = 25/259 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L++ I+V G+ A FL +T D L AR +A + +G++ F+ K
Sbjct: 16 AAKLTHLGVIRVEGEDAAKFLHGQLTQDFSLLGLSEARLAAFCSAKGRMQASFIGFKRSP 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108
+L R + + ++ + LR+ + + V
Sbjct: 76 TDILLVCSRDILAATLKRMSMFVLRAKAKLSDATADFAVYGLAGTALQNTIETIAGYEGS 135
Query: 109 -----TFSNSSFID--ERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTD 159
F S ++ A L G A+ + + + GI T
Sbjct: 136 AWAKTDFGPISLVNLYPADGTARALWVAPVGAPAPTAAVMTAEQWAWSEVRGGIA-TITQ 194
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + + G+S KGCY GQEVV+R Q R +++R + L +G
Sbjct: 195 TVVEAFVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYLAHSESAL-NAGDE 253
Query: 220 ILTDDIEIGTLGVVVGKKA 238
+ D G+VV A
Sbjct: 254 LFAPDDASQPCGMVVQAAA 272
>gi|307824019|ref|ZP_07654246.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96]
gi|307734803|gb|EFO05653.1| folate-binding protein YgfZ [Methylobacter tundripaludum SV96]
Length = 326
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 29/256 (11%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + + G A FLQ IT ++ + + A+ P+G+ + FL+ K +D F++
Sbjct: 40 HLGVLTIAGSDAAKFLQGQITCNINDITDAKSSLGALCNPKGRAITTFLLVKNADD-FLM 98
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD--- 124
+ + S+ +L Y LRS V + ++ E + ++RF+ +
Sbjct: 99 ILPQELLASVKKRLQMYVLRSKVTLTDSSDALCLIGLYDEASQPGE-VPEQRFATSSQEN 157
Query: 125 ------------------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
L D + L I GI +
Sbjct: 158 IVVNLQNRNLIIAGADNAQGLWEKQVKLGFQPEDSAQWRYLDIISGIPWLTAE-TSEEFI 216
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD-- 223
P +D L GIS KGCY GQE+V+R + ++ + P S I+ D
Sbjct: 217 PQMLNLDKLGGISFNKGCYTGQEIVARTHYLGKAKREMFLAECDALATPEPNSTIIDDSA 276
Query: 224 --DIEIGTLGVVVGKK 237
+ +G + +
Sbjct: 277 GTEQSVGKVLYAQNGQ 292
>gi|157423031|gb|AAI53525.1| Zgc:153540 protein [Danio rerio]
Length = 276
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 27/260 (10%)
Query: 39 ARGSAILTPQGKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIE 93
A + +L QG+ L ++ ++ + +LE D + +DS++ L YK+R V +
Sbjct: 11 AMYAHVLNVQGRTLYDIILYSLKGNPEGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLN 70
Query: 94 IQPINGVVLSWN---------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI--- 141
+ P + + T ++ + E+ +++ R + DI
Sbjct: 71 VCPSLSLWALLPHSKEAILGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSA 130
Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R
Sbjct: 131 CRLGNTEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTH 190
Query: 196 HRNIIRKRPMIITGTDDL--PPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
H +IRKR M ++ + GS + G V K L++ R+ ++
Sbjct: 191 HTGVIRKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQ 250
Query: 253 KGMALTVHGVRVKASFPHWY 272
+ V V+AS P W+
Sbjct: 251 LKSS-GDETVTVQASVPDWW 269
>gi|240125991|ref|ZP_04738877.1| hypothetical protein NgonSK_07202 [Neisseria gonorrhoeae SK-92-679]
Length = 287
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +V G+ FL ++ D+ L A + TP+G+++ ++ +D
Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
+L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D +L HR H A+ + I G T
Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V ALA+ + +
Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267
>gi|240013871|ref|ZP_04720784.1| hypothetical protein NgonD_04353 [Neisseria gonorrhoeae DGI18]
gi|240121441|ref|ZP_04734403.1| hypothetical protein NgonPI_06688 [Neisseria gonorrhoeae PID24-1]
Length = 287
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +V G+ FL ++ D+ L A + TP+G+++ ++ +D
Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
+L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 63 -LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D +L HR H A+ + I G T
Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V ALA+ + +
Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267
>gi|239999221|ref|ZP_04719145.1| hypothetical protein Ngon3_07040 [Neisseria gonorrhoeae 35/02]
gi|240080433|ref|ZP_04724976.1| hypothetical protein NgonF_03852 [Neisseria gonorrhoeae FA19]
gi|240115956|ref|ZP_04730018.1| hypothetical protein NgonPID1_06874 [Neisseria gonorrhoeae PID18]
gi|240118253|ref|ZP_04732315.1| hypothetical protein NgonPID_07296 [Neisseria gonorrhoeae PID1]
gi|240123801|ref|ZP_04736757.1| hypothetical protein NgonP_07659 [Neisseria gonorrhoeae PID332]
Length = 287
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +V G+ FL ++ D+ L A + TP+G+++ ++ +D
Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVIANMIVVNRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
+L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D +L HR H A+ + I G T
Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V ALA+ + +
Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267
>gi|126452702|ref|YP_001066586.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106a]
gi|167845302|ref|ZP_02470810.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei B7210]
gi|242315915|ref|ZP_04814931.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106b]
gi|126226344|gb|ABN89884.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1106a]
gi|242139154|gb|EES25556.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 1106b]
Length = 348
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157
Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153
R A W + L + G
Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARVPALEAALPRVSAAVWDWLDVRAGE 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ P D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312
>gi|240128504|ref|ZP_04741165.1| hypothetical protein NgonS_07711 [Neisseria gonorrhoeae SK-93-1035]
Length = 287
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +V G+ FL ++ D+ L A + TP+G+++ ++ +D
Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
+L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 63 -LLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D +L HR H A+ + I G T
Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V ALA+ + +
Sbjct: 240 IVLDSVQDSENFTALAVIKFSAAQKELT 267
>gi|117927009|ref|YP_867626.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
sp. MC-1]
gi|117610765|gb|ABK46220.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
sp. MC-1]
Length = 328
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 62/311 (19%), Positives = 116/311 (37%), Gaps = 45/311 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--K 59
+ V S+ + G FL +IT + + + A + +LTPQG+ L F+I+ +
Sbjct: 18 ALVDWSHTGVATITGDERKDFLSGLITNQIKRVTPECAIYAGLLTPQGRYLWDFIIAEQQ 77
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH--------- 108
++E+ +L + +LI +L Y LR+ + + ++++ Q
Sbjct: 78 MDENPRLLLLTEPGIQNLIGRLSMYLLRAKAKVSDASTTLGSLIVTGPQAPQVLTRLYAD 137
Query: 109 -----------TFSNSSFI---DERFSIADVL----------LHRTWGHNEKIASDIKTY 144
+ + D R + L + +
Sbjct: 138 IDFANQEPGTTVAPEAGVLVLKDPRHAAFGWRLVAEQAQLPNLWERLQAAQATPVGFHAW 197
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
R+ + D P +A + G+ TKGCY+GQE +R HR ++KR
Sbjct: 198 ESYRVAQALPRGGNDLEADITLPLEAGFLEMQGVDFTKGCYVGQETTARTHHRGTLKKRL 257
Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVH 260
+ + P I++ +D E G L + G +ALAI R+ + G L +
Sbjct: 258 FQVRWQEAASPKLGDIISVGEDKEAGHLTSISPAGGEALAIIRV----SDWESGKPLMLG 313
Query: 261 GVRVKASFPHW 271
++ + P W
Sbjct: 314 QTPLQVTKPAW 324
>gi|115313839|gb|AAI24382.1| Zgc:153540 [Danio rerio]
Length = 262
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 27/259 (10%)
Query: 40 RGSAILTPQGKILLYFLISKIEED-----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI 94
+ +L QG+ L ++ ++ + +LE D + +DS++ L YK+R V + +
Sbjct: 1 MYAHVLNVQGRTLYDIILYSLKGNPDGLNGVLLECDSTVQDSVMQLLKVYKIRRKVNLSV 60
Query: 95 QPINGVV---------LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI---- 141
P + + + T ++ + E+ +++ R + DI
Sbjct: 61 CPSLSLWALLPHSKEAVLGRPDVTTTDKVLVLEKDPRTELMGWRMITSAQDNPLDIVSAC 120
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ YH R G+ + D P P +A + + GIS +KGCYIGQE+ +R H
Sbjct: 121 QQGNTEEYHRHRYEIGLPEGVGDLPPGEALPLEANLVYMQGISFSKGCYIGQELTARTHH 180
Query: 197 RNIIRKRPMIITGTDDL--PPSGSPI-LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
+IRKR M ++ + GS + G V K L++ R+ ++
Sbjct: 181 TGVIRKRLMPVSLSAPAEKLNQGSALQTEGGKPAGKYRTGVDKLGLSLVRLAHAKETLQL 240
Query: 254 GMALTVHGVRVKASFPHWY 272
+ V V+AS P W+
Sbjct: 241 KSS-GDETVTVQASVPDWW 258
>gi|53723621|ref|YP_103082.1| hypothetical protein BMA1427 [Burkholderia mallei ATCC 23344]
gi|76811846|ref|YP_333840.1| glycine cleavage T-protein (aminomethyl transferase) [Burkholderia
pseudomallei 1710b]
gi|121598474|ref|YP_993237.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei SAVP1]
gi|124386525|ref|YP_001029318.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei NCTC 10229]
gi|126441510|ref|YP_001059318.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 668]
gi|134277134|ref|ZP_01763849.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 305]
gi|166998741|ref|ZP_02264595.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20]
gi|167893846|ref|ZP_02481248.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 7894]
gi|167902296|ref|ZP_02489501.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167910537|ref|ZP_02497628.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 112]
gi|167918564|ref|ZP_02505655.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei BCC215]
gi|217421508|ref|ZP_03453012.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 576]
gi|226197475|ref|ZP_03793052.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
gi|254178469|ref|ZP_04885124.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei ATCC 10399]
gi|254179463|ref|ZP_04886062.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655]
gi|254189150|ref|ZP_04895661.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei Pasteur 52237]
gi|254197345|ref|ZP_04903767.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei S13]
gi|254200028|ref|ZP_04906394.1| folate-binding protein YgfZ [Burkholderia mallei FMH]
gi|254206362|ref|ZP_04912714.1| folate-binding protein YgfZ [Burkholderia mallei JHU]
gi|254262077|ref|ZP_04953131.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a]
gi|254297344|ref|ZP_04964797.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 406e]
gi|254358223|ref|ZP_04974496.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280]
gi|262193312|ref|YP_001080745.2| glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei NCTC 10247]
gi|52427044|gb|AAU47637.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76581299|gb|ABA50774.1| Glycine cleavage T-protein (aminomethyl transferase) [Burkholderia
pseudomallei 1710b]
gi|121227284|gb|ABM49802.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei SAVP1]
gi|124294545|gb|ABN03814.1| folate-binding protein YgfZ [Burkholderia mallei NCTC 10229]
gi|126221003|gb|ABN84509.1| folate-binding protein YgfZ [Burkholderia pseudomallei 668]
gi|134250784|gb|EBA50863.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 305]
gi|147749624|gb|EDK56698.1| folate-binding protein YgfZ [Burkholderia mallei FMH]
gi|147753805|gb|EDK60870.1| folate-binding protein YgfZ [Burkholderia mallei JHU]
gi|148027350|gb|EDK85371.1| folate-binding protein YgfZ [Burkholderia mallei 2002721280]
gi|157808043|gb|EDO85213.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 406e]
gi|157936829|gb|EDO92499.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei Pasteur 52237]
gi|160699508|gb|EDP89478.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia mallei ATCC 10399]
gi|169654086|gb|EDS86779.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei S13]
gi|184210003|gb|EDU07046.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1655]
gi|217395250|gb|EEC35268.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 576]
gi|225930854|gb|EEH26864.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
gi|243065095|gb|EES47281.1| folate-binding protein YgfZ [Burkholderia mallei PRL-20]
gi|254220766|gb|EET10150.1| folate-binding protein YgfZ [Burkholderia pseudomallei 1710a]
gi|261835038|gb|ABO04361.2| folate-binding protein YgfZ [Burkholderia mallei NCTC 10247]
Length = 348
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157
Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153
R A W + L + G
Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ P D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312
>gi|304320079|ref|YP_003853722.1| glycine cleavage system T protein, aminomethyltransferase
[Parvularcula bermudensis HTCC2503]
gi|303298982|gb|ADM08581.1| glycine cleavage system T protein, aminomethyltransferase
[Parvularcula bermudensis HTCC2503]
Length = 279
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 19/275 (6%)
Query: 9 QSFIKVCGKSAIPFLQAIIT--ADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + V G FL ++T D R A+LTPQGKIL + + D ++
Sbjct: 10 RDLVSVAGDDRFTFLGNVLTIRCD---ADGPPLRYGALLTPQGKILDTYFMWARG-DHYL 65
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--------SWNQEHTFSNSSFIDE 118
++ + + ++ +L Y LR+ V I V + N + + D
Sbjct: 66 FDLPKGRGEAFAGRLKRYALRAAVTIAPVDDINVGIRPDHPTDQGPNGRDDAALTLLPDP 125
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R G A Y + I GI D T F + FP D +D L GI
Sbjct: 126 RLPTLGARG-LWAGSAAAGAPVEAEYRDHLIRLGIPDLGTGFDEADAFPLDVNLDRLGGI 184
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-- 236
KGC++GQEV SR+ + IRKR ++G +P G ++ +I++GT+ G
Sbjct: 185 DHKKGCFVGQEVASRMFRKGEIRKRTYCLSG-AQIPALGQSVMVGEIKLGTVTARSGDGR 243
Query: 237 KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
ALA+ R+D++ + T G ++ + P W
Sbjct: 244 AALALVRLDRL-GGREDSAVTTADGADLQLTAPFW 277
>gi|237812642|ref|YP_002897093.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346]
gi|237505565|gb|ACQ97883.1| glycine cleavage T-protein [Burkholderia pseudomallei MSHR346]
Length = 348
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157
Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153
R A W + L + G
Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSATVWDWLDVRAGE 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ P D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312
>gi|167823758|ref|ZP_02455229.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 9]
Length = 341
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 157
Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153
R A W + L + G
Sbjct: 158 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 217
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ P D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 218 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 276
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 277 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312
>gi|325183767|emb|CCA18225.1| hypothetical protein TTHERM_00155360 [Albugo laibachii Nc14]
Length = 366
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 73/345 (21%), Positives = 136/345 (39%), Gaps = 81/345 (23%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S V LS++ ++V GK A FLQ I+T D+ L + + ++ LT +G+IL + ++
Sbjct: 14 SVVKLSSRKLVQVEGKDASRFLQGILTNDINKLKQRSSMYASFLTAKGRILGDCNVIRVN 73
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------WNQEHTFS 111
E+TF ++ D S ++ L + YKLR V IE + +L+ +
Sbjct: 74 EETFWIDYDASSKEGLQNHWKRYKLRMKVSIEDRSDQFNILALLPALYRYPGLQKTSLDG 133
Query: 112 NSS---------------FIDERFSIADVLLH-----RTWGHNEKIASDIKTYHELRINH 151
S+ F D R + + + H+ ++D + + RI
Sbjct: 134 ESAIFDKLETAYGSRHLIFTDPRSKMFGIRAVVEGNDESIVHDAFESADASIFDDRRIFL 193
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----- 206
G + + + P +A +D L+G+S +KGCY+GQE+++R + ++RKR +
Sbjct: 194 GAAEGSE---LHDLIPLEANLDALDGVSFSKGCYVGQELMARTHFKGLVRKRIIPCAILP 250
Query: 207 -----------------------------------ITGTDDLPPSGSPI--LTDDIEIGT 229
+ G D+ G+ + IG+
Sbjct: 251 AGDQAKELDNLQAAFRSIDDREAISLREYLLNTPALAGQLDV-QRGTKVICTESSKPIGS 309
Query: 230 LGVVVGKK--ALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ + ALA+ R++ + H R+ P W+
Sbjct: 310 VIAIAPGIRAALAMIRLEHLSHYQFTTPD---GAFRLIPYQPFWW 351
>gi|329910243|ref|ZP_08275261.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
gi|327546229|gb|EGF31267.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
Length = 334
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 104/285 (36%), Gaps = 37/285 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I G A FL +T DV L AR + TP+G++L FL+ + D+
Sbjct: 29 LTDLGLIAFEGDDAANFLHNQLTNDVEHLGIDQARLAGYCTPKGRLLASFLMWRT-VDSI 87
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SW------NQE 107
+LE+ R + ++ +L + +R+ + ++ SW
Sbjct: 88 VLEVARDIQPAIQKRLQMFVMRAKAKSSDLTDSSAIIGLGGDAAGAALASWFPLLPDAPY 147
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIV 154
N++ R + A ++ W +IA + I I
Sbjct: 148 AKVENAAGTVIRLADAGTMVRYQWITTPEIAIAAWPQLGTTLRQAGTEHWRLTEILAAIP 207
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
P ++ + G++ KGCY GQE+V+R Q+ +++R + + +
Sbjct: 208 HITL-ATQEKFVPQMVNLEAIGGVNFRKGCYPGQEIVARSQYLGKLKRRTLPASVSAPEV 266
Query: 215 PSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGM 255
+G + + G++V L ++ A+ G
Sbjct: 267 AAGMEVFAANEPEQPCGMIVNAARDASGLHHCLVEIKTAALDAGT 311
>gi|158512691|sp|A1DDV0|CAF17_NEOFI RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
Length = 447
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 69/313 (22%), Positives = 116/313 (37%), Gaps = 70/313 (22%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + FLQ +IT D + +A L QG++L
Sbjct: 45 YARLTNRGLISITGVDSTTFLQGLITQNMLVANDPSRATRRTGTYTAFLNSQGRVLNDAF 104
Query: 57 ISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSW 104
I ++ +++E+D+++ SL+ L +KLRS + + V SW
Sbjct: 105 IYPMPKGDGETATTDDPAWLVEVDKNEVSSLLKHLKKHKLRSKLKLRALEDGERTVWSSW 164
Query: 105 NQEHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI-------- 137
+++ ID R L + ++
Sbjct: 165 KDHSEPRWAAYNLESESSSPFSPSSSVAGCIDTRAPGFGSRLVTPGEEDLRVHLPDEAQV 224
Query: 138 ---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
D+ TY R+ HGI + + + + P + MD++ G+ KGCY+GQE+ R
Sbjct: 225 AGSEVDLGTYTVRRMLHGIAEGQAEIIRESALPLECNMDMMRGVDFRKGCYVGQELTIRT 284
Query: 195 QHRNIIRKRPMII------------------TGTDDLPPSGSPILT----DDIEIGTLGV 232
H ++RKR + + T LPPSGS I G
Sbjct: 285 HHTGVVRKRIVPVQLYAKSPLPSGETPVYDPTAAVALPPSGSNISKVDGRKGRSAGKFLG 344
Query: 233 VVGKKALAIARID 245
VG LA+ R++
Sbjct: 345 GVGNIGLALCRLE 357
>gi|291614445|ref|YP_003524602.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
gi|291584557|gb|ADE12215.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
Length = 350
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS I+V G+ A FLQ ++++DV + A+ S+ T +G++L FLI +
Sbjct: 40 LCDLSQFGTIRVHGEEAQNFLQNLLSSDVNAVTPAAAQFSSFNTAKGRVLATFLIWRGGN 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108
D F L++ R + KL Y LR+ +E V L + +
Sbjct: 100 DHF-LQLPRELVAPIQKKLSMYVLRTKAKVENAGDAFVSLGLSGPNANALVKELVGPPPE 158
Query: 109 ---TFSNSSFID-------------ERFSI------ADVLLHRTWGHNEKIASDIKTYHE 146
++++ D +RF I A L + G + S +
Sbjct: 159 VVMAVASTAHFDTQQSHFTVIRLGEQRFQINVAPGHAADLWKKLSGAARPVGSPCWDWLN 218
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+R ++ P T P +DL+ ++ KGCY GQE+V+R+Q+ ++R +
Sbjct: 219 IRAGIPVILPQT---QEAFVPQMTNLDLIGAVNFKKGCYPGQEIVARMQYLGKNKRRMYL 275
Query: 207 IT-GTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+D LP G + + ++E G VV +
Sbjct: 276 AHVFSDALPQPGDELFSTEMEGQACGTVVNAQ 307
>gi|268599276|ref|ZP_06133443.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583407|gb|EEZ48083.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 288
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 22/271 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +V G+ FL ++ D+ L A + TP+G+++ ++
Sbjct: 1 MMKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFID 117
+D +L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 61 GDD-LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAF 119
Query: 118 ERFSIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTI 165
++D +L HR H A+ + I G T
Sbjct: 120 TSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETA 178
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D
Sbjct: 179 VAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGE 237
Query: 226 EIGTLGVVVGKK----ALAIARIDKVDHAIK 252
E G + V LA+ + +
Sbjct: 238 EAGIVLDSVQDSENFTTLAVIKFSAAQKELT 268
>gi|78066664|ref|YP_369433.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
gi|77967409|gb|ABB08789.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
Length = 344
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLGSFLTWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
+L + + + ++ +L + LR+
Sbjct: 93 HGVRLL-VSKDVQPAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVRDVLSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L ++ + + L
Sbjct: 152 GVHVKVDGPAGTLIRVPDAAGRKRYLWIGPRAEV-DARLAALGSSLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
I G + P D++ ++ KGCY GQE+V+R Q+R I++R
Sbjct: 209 IRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|172060853|ref|YP_001808505.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
gi|171993370|gb|ACB64289.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
Length = 344
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
+L + + + ++ +L + LR+
Sbjct: 93 HGVQLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVREALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPSVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGIELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|53719070|ref|YP_108056.1| hypothetical protein BPSL1434 [Burkholderia pseudomallei K96243]
gi|238563338|ref|ZP_00439040.2| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4]
gi|52209484|emb|CAH35436.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|238520913|gb|EEP84369.1| folate-binding protein YgfZ [Burkholderia mallei GB8 horse 4]
Length = 317
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 34/276 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 8 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 67
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 68 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFDALPDGI 126
Query: 119 ------------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGI 153
R A W + L + G
Sbjct: 127 HTKVDAPAGALMRLPDAAGRARYLWIATRAEFDARLPALEAALPRVSAAVWDWLDVRAGE 186
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTD 211
+ P D++ G++ KGCY GQEVV+R Q+R I++R +
Sbjct: 187 PRITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGT 245
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 246 DAAHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 281
>gi|292490833|ref|YP_003526272.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
gi|291579428|gb|ADE13885.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
Length = 345
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 66/309 (21%), Positives = 123/309 (39%), Gaps = 46/309 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I + G+ A LQ ++T D+ + + ++ + + P+G++L + + + +
Sbjct: 39 TDLSHLGLIALTGEDASTLLQNVLTNDIGEVNAQRSQLTGLCNPKGRLLAILRLFQWDTN 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEHTF 110
F L + S ++++ KL Y LR+ V + +Q + + + T
Sbjct: 99 -FYLSLPHSLLEAVLKKLNMYVLRAQVSLIDASEQYCCLGLAGLQASDELRHCLGKAPTA 157
Query: 111 SNSSFI------------DERFSIADVL--LHRTWGHNEKIASDIKT--YHELRINHGIV 154
N + RF + L + W K A + T + I GI
Sbjct: 158 VNEVYQTSSCCVLRVPGDPPRFEVVGEFDALQKLWSKLSKTAVPVGTHFWELATIRAGIA 217
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213
+ + P ++L G+S TKGCY GQEVV+R+ +R +R + TD
Sbjct: 218 TIYPE-TQESFIPQQVNLELTEGVSFTKGCYPGQEVVARMHYRGKPSRRMFLAHMITDKR 276
Query: 214 PPSGSPIL-TDDIEIGTLGVVV--------GKKALAIARIDKVDHA-----IKKGMALTV 259
P G P+ D E T+G +V G +L + ++ ++ G LT+
Sbjct: 277 PQPGDPVYLADGKEGQTVGEIVAAQPAPEGGYDSLVVLQLASLEKGDMVWNSGNGPELTL 336
Query: 260 HGVRVKASF 268
+ +
Sbjct: 337 RELPYELGK 345
>gi|83718935|ref|YP_442673.1| glycine cleavage T-protein superfamily protein [Burkholderia
thailandensis E264]
gi|257138886|ref|ZP_05587148.1| glycine cleavage T-protein superfamily protein [Burkholderia
thailandensis E264]
gi|83652760|gb|ABC36823.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis E264]
Length = 348
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 58/301 (19%), Positives = 101/301 (33%), Gaps = 39/301 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFDALPDGIHT 159
Query: 119 ----------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVD 155
R A W + L + G
Sbjct: 160 KVDAPAGALVRLPDAAGRARYLWIAARAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213
+ P D++ G++ KGCY GQEVV+R Q+R I++R + D
Sbjct: 220 VTLPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDA 278
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKASF 268
+G + D G++V A +D + A++ G L G
Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDALVEIKLAALESGSVHLASAGGPALTFL 338
Query: 269 P 269
P
Sbjct: 339 P 339
>gi|293390940|ref|ZP_06635274.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951474|gb|EFE01593.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 295
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ + I++ G A +LQ +T DV L + +A P+GK+ F + + +E
Sbjct: 15 CPLSHYTLIEMAGVDAEKYLQGQLTCDVTKLAAGESTLTAHCDPKGKMSALFRLIRQDEQ 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
TF + + S +D+L Y + S V + + + R ++
Sbjct: 75 TFYMLLKSELLPSALDQLKKYAVFSKVTFTPLDWQIIGAAGAKGIEKCGQISAQIRVAVN 134
Query: 124 DVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGI 178
D + +++ ++ + L I G+ P + + I
Sbjct: 135 DRQPRVILLNPTRLSIEPTAEANVWDLLDIQDGVP-GLAVATQLQFIPQALNLQSIEQAI 193
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI---LTDD-IEIGTLGVV 233
S KGCYIGQE V+R ++R ++ I T+ LP GSP+ L D+ GT+
Sbjct: 194 SFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPLEMALGDNWRSTGTIISA 253
Query: 234 VG 235
V
Sbjct: 254 VN 255
>gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC]
gi|330825752|ref|YP_004389055.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
gi|317116888|gb|ADU99376.1| folate-binding protein YgfZ [Alicycliphilus denitrificans BC]
gi|329311124|gb|AEB85539.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
Length = 313
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 22/264 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I+V G+ A FL +T D L + AR +A LT +G++L F+ K +
Sbjct: 17 TRLSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIAFKRNDA 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L R + +L + LR+ + + + + + E ++
Sbjct: 77 EVLLVCARELLAPTLKRLSMFVLRAKARLSDATDDFALYGLLGDAARAVLPEGGEPWAKI 136
Query: 124 D-------------------VLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPS 163
D L T G A D + + GI T +
Sbjct: 137 DLGEASVVQLYPADGQPRALWLAPATAGSAPAGAPLDESLWLWSEVRSGIA-TLTAPVAE 195
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + + G++ KGCY GQEVV+R Q R +++R + + +G+ + +
Sbjct: 196 AFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAI-AAGAEVFAE 254
Query: 224 DIEIGTLGVVVGKKALAIARIDKV 247
+G VV A +D +
Sbjct: 255 GDAEQPVGTVVQAAAAPGGGVDAL 278
>gi|24372450|ref|NP_716492.1| hypothetical protein SO_0861 [Shewanella oneidensis MR-1]
gi|24346433|gb|AAN53937.1|AE015531_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 318
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 21/230 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +TAD+ +L R A P+GK+L F I +
Sbjct: 21 LANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCDPKGKMLASFRTFTI-K 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106
D +L + + + + +L Y + S + +L Q
Sbjct: 80 DALLLLMPKDTIEVDLPQLQKYAVFSKATLSNASEEWCLLGVAGEQANQFVTQHFGEVAQ 139
Query: 107 EHTFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
E T + I +RF + + E D + L I G + +
Sbjct: 140 ELTLTEHGAILKDADRFILVLQPQAASALIAEHTVFDASAWQALEIAAGYPNLAPSHA-N 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|237807613|ref|YP_002892053.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187]
gi|237499874|gb|ACQ92467.1| folate-binding protein YgfZ [Tolumonas auensis DSM 9187]
Length = 299
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +L + + I++ G A+ +L +T DV+ L + A TP+GK+L F + K E
Sbjct: 13 SVYHLDDITVIRLEGPDAVKYLNGQVTCDVMALNPGQSILGAHCTPKGKVLAVFRLFKRE 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII----EIQPINGVVLSWNQEHTFSNSSFID 117
+D +L + + + +L Y + S V I + + G+ + + +
Sbjct: 73 QD-LLLIYKKELTEIQLAELKKYAVFSKVTITDVSDQFDVFGIAGTGTDAWLATGPGADN 131
Query: 118 ERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
+ I + + + L I G+ + + P +
Sbjct: 132 IQCQINPDRWLILSEKQQPLELKLPECPATDWRGLDILDGLPQFGKN-AQAEFIPQAFNL 190
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
L+GIS TKGCY GQE+V+R ++R + I+ GT P + + ++ + +IG
Sbjct: 191 QALHGISFTKGCYTGQEIVARAKYRGTNNRALFILKGTSGQPVNTNTVI--ERQIGEQWR 248
Query: 233 VVG 235
V G
Sbjct: 249 VSG 251
>gi|120612067|ref|YP_971745.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
gi|120590531|gb|ABM33971.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
Length = 304
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 23/280 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L+ I+V G+ A FL +T D L LP AR +A L+ +G++ F+ ++ +
Sbjct: 8 LAPLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGWRVGD 67
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS----------------WNQ 106
+L R ++ +L + LR+ + + + W++
Sbjct: 68 AEVLLVCSRDVLAPVLKRLSMFVLRAKARLTDATADFALWGLAGDAVAAVAGEALPPWSR 127
Query: 107 EHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPS 163
+ T + + A LL + G + + + G+ +
Sbjct: 128 QDTPQGTVVHLYPGAGQARALLAQPTGQPAPSGPALAPGLWEWGEVQSGVATLTAPLV-E 186
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + + G++ KGCY GQEVV+R Q R +++R + + + G+ +
Sbjct: 187 LFVPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPEAI-TVGAEVFAA 245
Query: 224 DIEIGTLGVVVGKKALAIARIDK--VDHAIKKGMALTVHG 261
G VV A D G AL V G
Sbjct: 246 SDAEQPCGTVVQAAAAPGGGFDALVALQVASTGEALRVGG 285
>gi|148555647|ref|YP_001263229.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
gi|148500837|gb|ABQ69091.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
Length = 222
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS LS+++ I++ G+ A FLQ ++T+DV + + +LTPQGK L F++
Sbjct: 1 MSGTTLSDRALIRLSGQGARDFLQGLVTSDVAG---PLPVWAGLLTPQGKALFDFIVWAD 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+D +++ + + D+L +L+ Y+LR I I G+ + W + D R
Sbjct: 58 GDD-LLIDCEAEQADALAKRLMLYRLRK--PIAIARDEGLAVHWAPDG---ERGAPDPRL 111
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ L R + A +H R G+ + + + DLLNG+S
Sbjct: 112 A---ALGRRWIASADGAAEG---WHAHRRALGVPEGVAEIGSDRNLWLECNADLLNGVSF 165
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207
KGCY+GQE +R+ R + +R +++
Sbjct: 166 AKGCYVGQENTARMNWRAKVNRRLVML 192
>gi|187478257|ref|YP_786281.1| aminomethyl transferase [Bordetella avium 197N]
gi|115422843|emb|CAJ49371.1| putative aminomethyl transferase [Bordetella avium 197N]
Length = 319
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 60/299 (20%), Positives = 112/299 (37%), Gaps = 40/299 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L I G A+ FL +T DV L AR + T +G++L LI + +
Sbjct: 17 AALPGLRVISAAGPDALGFLHGQLTQDVNGLAADGARLAGYCTAKGRLLATLLIWRASPE 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSFIDE 118
+ + ++L+ +L + LR+ + I + ++ +S +H T + +
Sbjct: 77 SVHALVRADLAEALVKRLSMFVLRAKLKISLTDLSVAGVSAGPDHLDALGTAAGGALPST 136
Query: 119 RFSIAD-------------VLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDP 156
++ AD + G + +D +++ + G+
Sbjct: 137 AWARADLSSGTWIAAPGNNLRWWWVAGAGQMQGQALRALLSEADEESWRAADLAAGLP-W 195
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P ++L+ G+S TKGCY GQEVV+R +R +++R +P +
Sbjct: 196 IAKATQDLFIPQTVNLELIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAHGVSALPVPAA 255
Query: 217 GSPILTD---DIEIGTLGVVV--GKKA-------LAIARIDKVDHAIKKGMALTVHGVR 263
G I D +G + G A LA D++ G A+T+ +
Sbjct: 256 GLDIYDASQPDEPVGRIVDAARDGDHASLLFETTLAALPADQLRVGAPDGPAITLRDLP 314
>gi|91783550|ref|YP_558756.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia xenovorans LB400]
gi|91687504|gb|ABE30704.1| Putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia xenovorans LB400]
Length = 361
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 97/267 (36%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L+ I G A FL +T D L AR + + +G++L FL +
Sbjct: 50 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAASARLAGYCSAKGRLLASFLTWR-S 108
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 109 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPD 168
Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151
R A L W G +I S + + L I
Sbjct: 169 GVHVKVDGAAGSLIRVPDALGRLRYLWVGPKAQIESQLALLDETLKRVSPAVWDWLDIRA 228
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 229 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLATVAG 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D +G+ + D G+VV
Sbjct: 288 EPDTVRAGAELFHSDDPGQPCGMVVNA 314
>gi|322492231|emb|CBZ27505.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 389
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/371 (18%), Positives = 110/371 (29%), Gaps = 105/371 (28%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
L ++ ++V G A FLQ I T D+ L + L G++L +
Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRDLHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSS--- 114
+ ++++ L D L K+R V I ++ V+ + S
Sbjct: 69 HEGQAAILVDVHERSAAGLFDHLTEMKMRKKVRIDDVGKELVVLAVLEDMSADAQRSGNS 128
Query: 115 --------------------------FIDERFSIADVLLHRTWGHNEKIASDIKT----- 143
F D R D L R + A+
Sbjct: 129 ASGCDARASSVTSLSRETLEEQHTECFPDPR---NDALFPRLPPPSSPTAASDSVDMAAA 185
Query: 144 ----------------------------------------YHELRINHGIVDPNTDFLPS 163
Y L + GI + F +
Sbjct: 186 SATAAPPSASPPPAVTPPNWFLRRCVVPATWAPPLSSPDPYTTLLYSRGIGEGPDVFKHN 245
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPIL 221
P + +D L G+S KGCY+GQE+ R + RKR + + PP+ I
Sbjct: 246 KSLPFEGNLDFLKGVSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGTIT 305
Query: 222 TDD-------------------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HG 261
+ +IG + V G + + R+ VD A + L + G
Sbjct: 306 DEGAVATTRPVEVGEPLYSSAREKIGEVTGVCGHVGIGLFRLRYVDKATQTVPGLQLKDG 365
Query: 262 VRVKASFPHWY 272
V+ P W+
Sbjct: 366 TPVRTHLPDWW 376
>gi|325526814|gb|EGD04311.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. TJI49]
Length = 266
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 40/269 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+ I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHGV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91
+L + + + ++ +L + LR+ V
Sbjct: 62 RLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ ++ R + D + G ++ + + L +
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWVGPRDEV-DARMAALAGKLPVVSPAVWDW--LDVRA 177
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G + P D++ ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAG 236
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
D +G + D G++V A
Sbjct: 237 DTDTVHAGVELFHSDDPGQPCGMIVNAAA 265
>gi|222111181|ref|YP_002553445.1| folate-binding protein ygfz [Acidovorax ebreus TPSY]
gi|221730625|gb|ACM33445.1| folate-binding protein YgfZ [Acidovorax ebreus TPSY]
Length = 311
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 106/289 (36%), Gaps = 31/289 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS+ I+V G+ A FL +T D L AR +A LT +G++ F+ K E
Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121
+L R + +L + +R+ + + + + + + +
Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRAKAKLTDATGDFALYGLLGDAARAVLPAGEPWAKAD 136
Query: 122 IADVLLHRTWGHNEKIAS----------------DIKTYHELRINHGIVDPNTDFLPSTI 165
+ D + + + + + + + GI T +
Sbjct: 137 VGDASVVQLYPAEGQPRALWVAPAGSAAPAGAALTEALWLWSEVRSGIA-TLTAPVVEAF 195
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + + G++ KGCY GQEVV+R Q R +++R + + G+ + D
Sbjct: 196 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGD 254
Query: 226 EIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G VV G AL +I A++ G A GV +
Sbjct: 255 AEQPVGTVVQVATAPTGGVDALVSLQIAATGGALRVGAA---DGVALTL 300
>gi|317035207|ref|XP_001401302.2| transferase caf17 [Aspergillus niger CBS 513.88]
Length = 445
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/363 (20%), Positives = 133/363 (36%), Gaps = 92/363 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + +LQ +IT D + +A L QG++L
Sbjct: 46 YARLTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAF 105
Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106
+ + +E +++E+D+S+ SL+ L +KLR+ + + V SW
Sbjct: 106 LYPLPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASWKD 165
Query: 107 EHTFSNSSF--------------------IDERFS----------IADVLLHRTWGHNEK 136
+++ +D R D+ H E
Sbjct: 166 HSEPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEG 225
Query: 137 IAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R
Sbjct: 226 YGSEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRT 285
Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230
H ++RKR + + + +LPPSGS I G
Sbjct: 286 HHTGVVRKRILPVQLYEGSLGDLESADMPVYDPSVEVELPPSGSNISKVSARKGRSAGKF 345
Query: 231 GVVVGKKALAIARID--------------------KVDHAIKKGMALTVHGVRVKASFPH 270
VG LA+ R++ KV + + V++KA P
Sbjct: 346 LGGVGNIGLALCRLEMMTDVALTGEGTQYSPDQEFKVSWTGAEDGSSESGEVKLKALVPA 405
Query: 271 WYK 273
W +
Sbjct: 406 WTR 408
>gi|170090854|ref|XP_001876649.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648142|gb|EDR12385.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 72/346 (20%), Positives = 121/346 (34%), Gaps = 77/346 (22%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--- 59
+ N+ I V G A FL ++++ + ++ SA+L QG++L +
Sbjct: 15 LAPIPNRGIISVFGSQAFSFLNGLLSSSIGP-QDNGSQFSAVLNAQGRVLYDVFLYPSTN 73
Query: 60 -IEEDTFILEIDR--SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSF 115
+ + LE D S+ L+ L + LRS V + ++ + SW +
Sbjct: 74 SAGKPGYFLEYDNRLSEAPPLLSYLKRHILRSKVQVRDVSEDYTLWASWGATEDQVWETQ 133
Query: 116 IDERFSIADVL-------LHRTWGHNEKI----------------------------ASD 140
++ + L + WG +E I D
Sbjct: 134 RQWSWARSGALEPVWDNPTYSPWGTDENIIHDRRAVGMGRRHLLKADQGSKVLRDYETVD 193
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ Y RI HG+ + N D T FP D+ +D + G+ KGCY+GQE+ R H II
Sbjct: 194 SEAYLLHRIIHGVPEGNMDIPAMTAFPMDSNLDAMGGLDFRKGCYVGQELTVRTYHTGII 253
Query: 201 RKRPMII--TGTDDLPPSGSPILTD------------------DIEI------GTLGVVV 234
RKR + D+ P + + + I G L
Sbjct: 254 RKRTFPVLLHKPDENPEDITSLTSHAFPSNIDIRPSVKSRGDISRPISRPRGTGKLLSTA 313
Query: 235 GKKALAIARIDKVDHAIKKGMALTV----HGV----RVKASFPHWY 272
LA+ R++ V + L + G V +P W+
Sbjct: 314 QGVGLALLRLEHVAGVQNGDLDLQIEIPEGGRTSMWSVSPWWPSWW 359
>gi|221198168|ref|ZP_03571214.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
gi|221208341|ref|ZP_03581344.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221171754|gb|EEE04198.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221182100|gb|EEE14501.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
Length = 310
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 102/278 (36%), Gaps = 40/278 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+ I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91
+L + + + ++ +L + LR+ V
Sbjct: 62 RLL-VSKDIQAAVQKRLSMFVLRAKAKLTDASEALAVVGFAGDVRDALSGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ +I R + D L G ++ + + L +
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D++ ++ KGCY GQEVV+R Q+R I++R +
Sbjct: 178 GEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAA 236
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 237 DTDTMHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|240113196|ref|ZP_04727686.1| hypothetical protein NgonM_06426 [Neisseria gonorrhoeae MS11]
Length = 287
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 22/268 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +V G+ FL ++ D+ L A + TP+G+++ ++ +D
Sbjct: 3 TLLPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVIANMIVVNRGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
+L + + ++ + +L + LR+ + EI V + + + S
Sbjct: 63 -LLLIMAQDLLEATVKRLQMFVLRAKAVFEILEDYAVGAELAASAEPLAAQEPSLAFTSE 121
Query: 121 SIAD-----VLLHRTWGH-------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
++D +L HR H A+ + I G T
Sbjct: 122 CVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLHEIRSGYP-WICAATKETAVAQ 180
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
++ G+ KGCY GQE+++R Q+R +++ +++G + +G + D E G
Sbjct: 181 MLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLSG-NSAAEAGILLTADGEEAG 239
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIK 252
+ V LA+ + +
Sbjct: 240 IVLDSVQDSENFTTLAVIKFSAAQKELT 267
>gi|167622662|ref|YP_001672956.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
halifaxensis HAW-EB4]
gi|167352684|gb|ABZ75297.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
halifaxensis HAW-EB4]
Length = 323
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 23/263 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I V G+ F+ +T D+ +L R A P+GK+L F DT
Sbjct: 24 LTHLGLISVTGEQGRSFIHGQVTTDISSLESDQWRWGAHCDPKGKMLASFRTFAKG-DTL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----------NSS 114
L + + + +L Y + S + + ++L E + +
Sbjct: 83 FLMMPKETLALDLPQLQKYAVFSKAELSDASDHWLLLGVAGEQAKTWLTAQFGELTDELT 142
Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPST 164
ID I D ++ AS D + L I G + +
Sbjct: 143 LIDNGMIIHDAGRFILAIEQDQAASLISAIEQPIYDATAWQALEIAAGYPNLGANH-QGQ 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY+GQE ++R+++R ++ I++GT P + L
Sbjct: 202 FVPQMCNVQAVNGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSTPLTADSQLEIA 261
Query: 225 IEIGTLGVVVGKKALAIARIDKV 247
+E G G A+ R D+V
Sbjct: 262 LEDGEGFRRAGTIIEAVQRGDQV 284
>gi|261867315|ref|YP_003255237.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412647|gb|ACX82018.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 295
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 11/225 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ + I++ G A +LQ +T DV L + +A P+GK+ F + + +E
Sbjct: 15 CPLSHYTLIEMAGVDAEKYLQGQLTCDVTKLAAGESTLTAHCDPKGKMSALFRLIRQDEQ 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFS 121
TF + + S +D+L Y + S V P++ ++ I R +
Sbjct: 75 TFYMLLKSELLPSALDQLKKYAVFSKVTF--TPLDWQIIGAAGAKGIEKYGQISAQIRVA 132
Query: 122 IADVLLHRTWGHNEKIA----SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLN 176
+ D + +++ ++ + L I G+ P + +
Sbjct: 133 VNDRQPRVILLNPTRLSIEPTAEANVWDLLDIQDGVP-GLAVATQLQFIPQALNLQSIEQ 191
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI 220
IS KGCYIGQE V+R ++R ++ I T+ LP GSP+
Sbjct: 192 AISFHKGCYIGQETVARAKYRGANKRALFIFAAQTESLPDIGSPL 236
>gi|158512851|sp|A2R472|CAF17_ASPNC RecName: Full=Putative transferase caf17, mitochondrial; Flags:
Precursor
gi|134081987|emb|CAK46672.1| unnamed protein product [Aspergillus niger]
Length = 444
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 75/363 (20%), Positives = 133/363 (36%), Gaps = 92/363 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIIT------ADVLTLPYKIARGSAILTPQGKILLYFL 56
L+N+ I + G + +LQ +IT D + +A L QG++L
Sbjct: 45 YARLTNRGLISITGIDSTSYLQGLITQNMLITNDPNRPTRRTGSYTAFLNSQGRVLNDAF 104
Query: 57 ISKI--------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQ 106
+ + +E +++E+D+S+ SL+ L +KLR+ + + V SW
Sbjct: 105 LYPLPQAEGTSPDEHAWLVEVDKSEVTSLLKHLKKHKLRAKLKLRALDEGERTVWASWKD 164
Query: 107 EHTFSNSSF--------------------IDERFS----------IADVLLHRTWGHNEK 136
+++ +D R D+ H E
Sbjct: 165 HSEPRWAAYNLDSQSFSPFASSSATVTGCVDTRAPGFGSRLITPGEGDLTTHLAGAEGEG 224
Query: 137 IAS--DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
S D+ +Y R+ HG+ + ++ + + P ++ MD++ GI KGCY+GQE+ R
Sbjct: 225 YGSEVDLGSYTVRRMLHGVAEGQSEIIRESALPLESNMDMMRGIDFRKGCYVGQELTIRT 284
Query: 195 QHRNIIRKRPMII--------------------TGTDDLPPSGSPI----LTDDIEIGTL 230
H ++RKR + + + +LPPSGS I G
Sbjct: 285 HHTGVVRKRILPVQLYEGSLGDLESADMPVYDPSVEVELPPSGSNISKVSARKGRSAGKF 344
Query: 231 GVVVGKKALAIARID--------------------KVDHAIKKGMALTVHGVRVKASFPH 270
VG LA+ R++ KV + + V++KA P
Sbjct: 345 LGGVGNIGLALCRLEMMTDVALTGEGTQYSPDQEFKVSWTGAEDGSSESGEVKLKALVPA 404
Query: 271 WYK 273
W +
Sbjct: 405 WTR 407
>gi|121594085|ref|YP_985981.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
gi|120606165|gb|ABM41905.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
Length = 311
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 106/289 (36%), Gaps = 31/289 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS+ I+V G+ A FL +T D L AR +A LT +G++ F+ K E
Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121
+L R + +L + +R+ + + + + + + +
Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRAKAKLTDATGDFALYGLLGDAARAVLPAGEPWAKAD 136
Query: 122 IADVLLHRTWGHNEKIAS----------------DIKTYHELRINHGIVDPNTDFLPSTI 165
+ D + + + + + + + GI T +
Sbjct: 137 VGDASVVQLYPAEGQPRALWVAPAGSAAPAGAALTEALWLWSEVRSGIA-TLTAPVVEAF 195
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + + G++ KGCY GQEVV+R Q R +++R + + G+ + D
Sbjct: 196 VPQMLNYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAV-AVGAEVFADGD 254
Query: 226 EIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G VV G AL +I A++ G A GV +
Sbjct: 255 AEQPVGTVVQVAAAPTGGVDALVSLQIAATGGALRVGAA---DGVALTL 300
>gi|170703704|ref|ZP_02894430.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
gi|170131386|gb|EDS99987.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
Length = 310
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 99/278 (35%), Gaps = 40/278 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 2 PLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91
+L + + + ++ +L + LRS V
Sbjct: 62 QLL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVREALSGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ +I R + D L G ++ + + L +
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G + P D++ ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAG 236
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 237 ETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|161524552|ref|YP_001579564.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189350692|ref|YP_001946320.1| putative aminomethyltransferase [Burkholderia multivorans ATCC
17616]
gi|160341981|gb|ABX15067.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189334714|dbj|BAG43784.1| predicted aminomethyltransferase [Burkholderia multivorans ATCC
17616]
Length = 345
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 104/281 (37%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L+ I V G A FL + +T D+ L AR S +P+G++L FL +
Sbjct: 34 AYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 93
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 94 HDVRLL-VSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPD 152
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ G ++ +I R + D L G ++ + + L
Sbjct: 153 GVHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALDGKLPVVSPAVWDW--LD 209
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G T + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 210 VRAGEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 268
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ D +G + D G++V A +D +
Sbjct: 269 VAADTDTVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 309
>gi|115351883|ref|YP_773722.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
gi|115281871|gb|ABI87388.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
Length = 344
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 40/281 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------------ 91
+L + + + ++ +L + LR+
Sbjct: 93 HGVQLL-VSKDVQAAVQKRLSMFVLRAKAKLTDASDTLAVVGFAGDVREALSGIFDALPD 151
Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+++ G ++ +I R + D L G ++ + + L
Sbjct: 152 GMHVKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
+ G + P D++ ++ KGCY GQEVV+R Q+R I++R
Sbjct: 209 VRAGEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+ G D +G + D G++V A +D +
Sbjct: 268 VAGETDTVHAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 308
>gi|167581611|ref|ZP_02374485.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis TXDOH]
Length = 348
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/301 (19%), Positives = 101/301 (33%), Gaps = 39/301 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+L + + + ++ +L + LR+ + V + + + S D
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGLAGDVRAALSGIFDALPDGIHT 159
Query: 119 ----------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINHGIVD 155
R A W + L + G
Sbjct: 160 KVDAPAGALVRLPDAAGRARYLWIAARAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213
+ P D++ G++ KGCY GQEVV+R Q+R I++R + D
Sbjct: 220 VTLPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDA 278
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKASF 268
+G + D G++V A + +D + A++ G L G
Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPESGVDALVEIKLAALESGSVHLASAGGPALTFL 338
Query: 269 P 269
P
Sbjct: 339 P 339
>gi|71753323|ref|XP_826136.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62359621|gb|AAX80054.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 316
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/304 (20%), Positives = 109/304 (35%), Gaps = 54/304 (17%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED--TFILEIDRSKRDSL 77
LQ + T D+ L + L G+++ + + E T ++++ D+L
Sbjct: 1 LQGLFTNDLRQLQPGGSLWGCFLHHTGRVMCDAYLYQSTRTPEGQVTIMIDVHCGVADTL 60
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLS---------------------------WNQEHTF 110
++ L Y++R + I VV++ +QE +
Sbjct: 61 LEHLKEYRMRKKLEIRSAAEELVVVAAATIGNSISSCGDNAGSSPSSSSATYGGDQELSG 120
Query: 111 SNS---------SFIDERFSIADVLLHRTWGH---NEKIASDIKTYHELRINHGIVDPNT 158
+F D R L + K Y + G+ +
Sbjct: 121 PQGVDSFDTLAETFTDPRSFALPATLRKMIVPRKGAPPTLDSEKLYKKFLYAAGVGEGPE 180
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----- 213
F PS P +A DLL G+S KGCY+GQE+ R + RKR + + +L
Sbjct: 181 VFRPSKTLPFEANTDLLRGVSFHKGCYMGQELTHRTHVMLVTRKRTVPLFLQGELFDGKG 240
Query: 214 ----PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASF 268
P ++ + ++G + G L + R++ VD + L++ G V A
Sbjct: 241 GEKTPHVEGTLVIGNQKVGEVLTACGNVGLGLLRLNHVDITTRSFPGLSLSDGTTVDARI 300
Query: 269 PHWY 272
P W+
Sbjct: 301 PEWW 304
>gi|165975514|ref|YP_001651107.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250536|ref|ZP_07336733.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251880|ref|ZP_07338051.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|165875615|gb|ABY68663.1| hypothetical protein APJL_0057 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302649310|gb|EFL79495.1| hypothetical protein APP2_0201 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650524|gb|EFL80683.1| hypothetical protein APP6_0106 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 295
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 22/278 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS I++ G A +LQ +T DV L + P+GK+ + +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119
D FI I +++L Y + S V PI GV N ++ + +
Sbjct: 76 DKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
+ WG + +D + + + I GI + P + + N I
Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAI 190
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVV 234
S +KGCYIGQE V+R ++R ++ + G D LP G + ++++G
Sbjct: 191 SFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRAT 247
Query: 235 GKKALAIARIDKV------DHAIKKGMALTVHGVRVKA 266
G ++A +K+ ++ ++ A ++GV +
Sbjct: 248 GTILNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 285
>gi|167586963|ref|ZP_02379351.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ubonensis Bu]
Length = 344
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 62/308 (20%), Positives = 108/308 (35%), Gaps = 45/308 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I V G A FL +T D+ L AR + +P+G++L F+ +
Sbjct: 33 AYMPLPQFGVIDVAGDDAATFLHTQLTNDIEHLDAASARLAGYCSPKGRLLASFVAWRSG 92
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-------------------------------- 89
D +L + + + ++ +L + LR+
Sbjct: 93 HDVRLL-VSKDVQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRAALSGIFDALPD 151
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
V ++I G ++ +I R + D L G ++ + + L
Sbjct: 152 GVHVKIDGPAGALIRMPDAAGKRRYLWIGPRAEV-DARLAALDGKLPAVSPAVWDW--LD 208
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
I G T P D++ ++ KGCY GQE+V+R Q+R I++R
Sbjct: 209 IRAGEPR-VTQPAVEQFVPQMINFDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRTALAH 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHG 261
G D +G + D G+VV A +D + A++ G L
Sbjct: 268 AAGDTDAVRAGIELFHSDDPSQPCGMVVNAAAAPAGGVDALVEIKLAALESGSVHLGAAD 327
Query: 262 VRVKASFP 269
A P
Sbjct: 328 GPALAFEP 335
>gi|88607941|ref|YP_505789.1| aminomethyl transferase family protein [Anaplasma phagocytophilum
HZ]
gi|88599004|gb|ABD44474.1| aminomethyl transferase family protein [Anaplasma phagocytophilum
HZ]
Length = 275
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 24/279 (8%)
Query: 5 YLS-NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+LS ++ IKV G A FL I T DVL + A + IL +G+ L F + K ++
Sbjct: 2 FLSQSRGVIKVSGADAAKFLHNITTNDVLQMESPSAVYNLILNSKGRFLFDFFLIKCDK- 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114
F+L+ +R +I+ L Y++ V I+ V L Q +
Sbjct: 61 HFLLDCEREAIMPIIELLRLYRVVLKVKIKSCDEYSVALDTKQRLGDPGYTKTLEDGTIV 120
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPH 168
F D R ++ + H + D+ T Y LR+ + I + TD + FP
Sbjct: 121 FQDPR--CVNMGVRYIVPHTSSVQYDMPTSQTNTEYSMLRMVNTIPNCATDMVSGESFPL 178
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPPSGSPILTDDIEI 227
+D LN IS TKGCY GQEVV+R+ + R + LP +G I + +
Sbjct: 179 HFGLDKLNAISHTKGCYTGQEVVARMHRIGAKKTLRTVFSESGISLPQTG-EIFVNQQCV 237
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + L + K+ + L++ +++
Sbjct: 238 GEMITSTENWGLCMLETSKLPTGY---VDLSIGDIKLTL 273
>gi|224826501|ref|ZP_03699602.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002]
gi|224601102|gb|EEG07284.1| folate-binding protein YgfZ [Lutiella nitroferrum 2002]
Length = 325
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ S I+V G+ A FLQ +++D+ + ++ S+ +G++L FLI + D
Sbjct: 26 CSMAHFSIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRVLGNFLIWQFRGD 85
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WN 105
F+L + +L +L + LRS V +E+ ++
Sbjct: 86 YFLL-VSADIATALCRRLSMFVLRSEVKLEVLAEPWLLAGVKGGGAEAVLKDVFTEVPAQ 144
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDP 156
+N S R ++LL + I S ++ + L I G+
Sbjct: 145 PHDVIANESGAIIRLPAGNLLLSYDASASGSIKSRLEQACRQVGVEAWSLLDIAAGVP-W 203
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
T P MD+L GIS KGCY GQE+V+R Q+ +++R + P
Sbjct: 204 VTRPTQEQFVPQMINMDVLGGISFKKGCYPGQEIVARTQYLGKVKRRLFRVELPVKASP- 262
Query: 217 GSPILT---DDIEIG-TLGVVVGKKA----LAIARI 244
G P+ + D IG + + LA+A++
Sbjct: 263 GDPLYSPATGDQAIGMIVNTGCDQHGALVALAVAQL 298
>gi|296157857|ref|ZP_06840691.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1]
gi|295892103|gb|EFG71887.1| folate-binding protein YgfZ [Burkholderia sp. Ch1-1]
Length = 357
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L+ I G A FL +T D L AR + + +G++L FL +
Sbjct: 46 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 104
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 105 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDASGELAVIGLAGDVRKALSGVFDALPD 164
Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151
R A L W G +I + + L I
Sbjct: 165 GVHVKVDGAAGSLIRVPDALGRLRYLWVGPKAQIEPQLALLDETLKRVSPAVWDWLDIRA 224
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 225 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 283
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D +G+ + D G+VV
Sbjct: 284 EPDSVRAGAELFHSDDPGQPCGMVVNA 310
>gi|87198956|ref|YP_496213.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444]
gi|87134637|gb|ABD25379.1| aminomethyl transferase [Novosphingobium aromaticivorans DSM 12444]
Length = 248
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 2 SSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
L +++ +++ + FLQ ++T DV + + +A+LTPQGK+L F++
Sbjct: 5 PGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGV---LPVWTALLTPQGKVLFDFIV 61
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ +LE + S D+L +L Y+LR I I + + W +S D
Sbjct: 62 WP-DGKGLLLECEASAADALAKRLTLYRLRRK--IAISRADDLAAHWEDHPGDGGAS--D 116
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
R N+ + D+ Y E R+ G+ + + + + LNG
Sbjct: 117 PRLRALGQRWIAPVSDND-VGVDM-AYREHRLKLGVPEGRAELGDGEVLWLECNAADLNG 174
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+S TKGCY+GQE +R+ R + +R +++ P
Sbjct: 175 VSFTKGCYVGQENTARMNWRQKVNRRLIVVPLEQSDPA 212
>gi|251793343|ref|YP_003008071.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus
NJ8700]
gi|247534738|gb|ACS97984.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus
NJ8700]
Length = 295
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 11/245 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + + I++ G A +LQ +T DV L + +A P+GK+ F + + +E
Sbjct: 15 CPLEHYTLIEIAGTDAEKYLQGQLTCDVTKLAGGESTLTAHCDPKGKMSALFRLIRQDEQ 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----HTFSNSSFIDER 119
TF + + + S +D+L Y + S V + + + + FS +D +
Sbjct: 75 TFYMLLKSALLPSALDQLKKYAVFSKVTFTLLDWQILGAAGTKGIEKCGQFSAQIRVDVK 134
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGI 178
++L + + + + L I G+ P + + I
Sbjct: 135 TQQPRIILLHPTRLALEPTVEAEAWDLLDIQDGVPSLAA-ATQLEFIPQALNLQSIERAI 193
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGS--PILTDD--IEIGTLGVV 233
S KGCYIGQE V+R ++R ++ I T LP GS + D GT+
Sbjct: 194 SFQKGCYIGQETVARAKYRGANKRALFIFAARTQSLPDIGSALEMALGDNWRATGTITSA 253
Query: 234 VGKKA 238
V
Sbjct: 254 VNFHG 258
>gi|85373394|ref|YP_457456.1| aminomethyltransferase [Erythrobacter litoralis HTCC2594]
gi|84786477|gb|ABC62659.1| predicted aminomethyltransferase [Erythrobacter litoralis HTCC2594]
Length = 246
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 28/251 (11%)
Query: 2 SSVYLSNQSFIKVCGKSA----IPFLQAIITADVL-TLPYKIARGSAILTPQGKILLYFL 56
+ L +++ I++ A FLQ ++T DV TLP + +LTPQGK L F+
Sbjct: 6 TPTRLFDRAVIRLSPSDASGDVADFLQGLVTNDVKGTLPA----YAGLLTPQGKALFDFI 61
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ + +++ + D +L Y+LR IEI + V + W + +
Sbjct: 62 VWPSGKGELLVDCEADLADEFAKRLSLYRLRRK--IEIARDDSVAVHWQPH--IGDGAAN 117
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D R AD+ ++ S + + + R++ G+ + + I + LN
Sbjct: 118 DPRL--ADLGQRWLAPVSDADESADEAWRKHRLSLGVPEGRAEM--GDILWLETNAVELN 173
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
G+S KGCY+GQE +R+ R I +R +++ D+ I +G
Sbjct: 174 GVSFGKGCYVGQENTARMNWRQKINRRLVVVPLD----------TADEKRIKARHEDLG- 222
Query: 237 KALAIARIDKV 247
A++ RID +
Sbjct: 223 LAISHLRIDDI 233
>gi|294669214|ref|ZP_06734294.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308846|gb|EFE50089.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 323
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 21/261 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I+V G+ FL ++ + L A + TP+G+++ L+
Sbjct: 37 MHTSALPFFGLIRVSGEDRASFLHGQLSNHIEGLAEGEACYATYNTPKGRVIANMLVFNR 96
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
ED + ++L +L + LR+ + E P G N+ ++ F
Sbjct: 97 GEDLLL-LTAADLVEALCKRLRMFVLRAKAVFEPLPGYGAAGRLNEGAPALPAAEPHLSF 155
Query: 121 SIA--DVLLHRTWGHNEKI------------ASDIKTYHELRINHGIVDPNTDFLPSTIF 166
A D L+ T H + A + I G ++ +
Sbjct: 156 PFAVSDGLIECTLPHGGILLAGEKDTLPAYDAEAENAWQLHEIRSGYP-WISEATKESCV 214
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
+ G+ KGCY GQE+++R Q+R +++ ++ G+ L +G +L D E
Sbjct: 215 AQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLLGS-SLEAAGIAVLQDGAE 273
Query: 227 IG----TLGVVVGKKALAIAR 243
G T G +LA+ +
Sbjct: 274 AGIIINTACTAEGSLSLAVIK 294
>gi|46143319|ref|ZP_00204442.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207545|ref|YP_001052770.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae L20]
gi|190149326|ref|YP_001967851.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|126096337|gb|ABN73165.1| hypothetical protein APL_0057 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914457|gb|ACE60709.1| hypothetical protein APP7_0057 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
Length = 295
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 13/226 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS I++ G A +LQ +T DV L + P+GK+ + +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119
D FI I +++L Y + S V PI GV N ++ + +
Sbjct: 76 DKFIAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
+ WG + +D + + + I GI + P + + N I
Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAI 190
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
S +KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 191 SFSKGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 236
>gi|114048794|ref|YP_739344.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
gi|113890236|gb|ABI44287.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
Length = 318
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 26/252 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+
Sbjct: 21 LANLSHLGLIKVVGEQGRSFMHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ- 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111
D ++ + + + + +L Y + S + +L E
Sbjct: 80 DALLMLMPKDTLELDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQAVPFVTQHFGEITE 139
Query: 112 ------NSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + +RF + T E D + L I G + +
Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPI 220
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L +G I
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSLNINLETGIEI 258
Query: 221 LTDD--IEIGTL 230
+D + G +
Sbjct: 259 ELEDGYRKGGQI 270
>gi|329850297|ref|ZP_08265142.1| glycine cleavage T-protein C-terminal barrel domain protein
[Asticcacaulis biprosthecum C19]
gi|328840612|gb|EGF90183.1| glycine cleavage T-protein C-terminal barrel domain protein
[Asticcacaulis biprosthecum C19]
Length = 218
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
+ L+S D L++ ++ R+ L+ KL Y+LR+ V I+ + V +++
Sbjct: 1 MYADCLLSPRSADEVWLDVPQTAREELVAKLNMYRLRAKVTIDALDLP-VYAAFDG--PM 57
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + +G A+D + R ++G+ + TDF ++ DA
Sbjct: 58 PEGFASDPRSEVIGADFSFAYGPQTPNATD---WAAFRYSYGLAEAGTDFAKDELYAIDA 114
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+DLLNGI KGCY+GQE+ SR++ R I+ R + + LPP G+ +L + G +
Sbjct: 115 NLDLLNGIDFKKGCYVGQELTSRMKRRGQIKNRILPLRHAGHLPP-GAEVLNGERRAGEV 173
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
+ +LA+ R+D++D LT G + + P W
Sbjct: 174 LASIDGNSLALMRLDRLDG------ELTCDGHTLNLTIPDW 208
>gi|221215089|ref|ZP_03588056.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
gi|221165025|gb|EED97504.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
Length = 310
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 101/278 (36%), Gaps = 40/278 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L I V G A FL + +T D+ L AR S +P+G++L FL + D
Sbjct: 2 PLVQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91
+L + + + ++ +L + LR+ V
Sbjct: 62 RLL-VSKDIQAAVQKRLSMFVLRAKAKLTDASDALAVVGFAGDVRDALSGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ +I R + D L G ++ + + L +
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGKLPVVSPAVWDW--LDVRA 177
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D++ ++ KGCY GQEVV+R Q+R I++R +
Sbjct: 178 GEPR-ITQPVVEQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAA 236
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + D G++V A +D +
Sbjct: 237 DTDAVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDAL 274
>gi|33151540|ref|NP_872893.1| hypothetical protein HD0303 [Haemophilus ducreyi 35000HP]
gi|33147760|gb|AAP95282.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 295
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 11/225 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS+ I + G A +LQ +T DVL L + P+GKI F I + E
Sbjct: 16 CVELSDYRLIGIAGVDAASYLQGQLTCDVLKLAIGEHTLTCHCDPKGKISALFRIYRAAE 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERF 120
F + I + +L Y + S V P+ GV NS+ +
Sbjct: 76 QQFFMIIHNDLLAEALVQLKKYAVFSKVTFTPLTTPLYGVTGHEQLAKISENSTALLLNQ 135
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGIS 179
+ ++ WG + D + + I GI P + + N IS
Sbjct: 136 AQKRAII---WGEDLVTNGDCSLWDLMDIQDGIP-ILLKANQFEFIPQAVNLHAIENAIS 191
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
TKGCY+GQE V+R ++R + ++ + G D LP I
Sbjct: 192 FTKGCYMGQETVARAKYRGVNKRAMFTLVGVFDGQVALPQIAESI 236
>gi|217972050|ref|YP_002356801.1| folate-binding protein YgfZ [Shewanella baltica OS223]
gi|217497185|gb|ACK45378.1| folate-binding protein YgfZ [Shewanella baltica OS223]
Length = 320
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 26/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117
F+L + + + + +L Y + S + +L E F + F D
Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFVSEHFGDIHQ 139
Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+RF + ++ D + L I G +
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L P SG
Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISPESGL 258
Query: 219 PILTDD 224
I +D
Sbjct: 259 EIAMED 264
>gi|167562451|ref|ZP_02355367.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia oklahomensis EO147]
gi|167569634|ref|ZP_02362508.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia oklahomensis C6786]
Length = 348
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 34/274 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL + +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+L + + + + +L + LR+ + V + + + + S D
Sbjct: 101 LL-VSKDVQPAAQKRLSMFVLRAKAKLADASDALVAIGFAGDVRAALSGVFDALPDGVHT 159
Query: 119 ----------RFSIADVLLHRTWG-------------HNEKIASDIKTYHELRINHGIVD 155
R A W + L + G
Sbjct: 160 KVDAPAGALIRLPDAAGRARYLWIGTRAELDARLPALEAALPRVSAAVWDWLDVRAGEPR 219
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213
+ P D++ G++ KGCY GQEVV+R Q+R I++R + D
Sbjct: 220 ITQPAV-EQFVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAVGADA 278
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
+G + D G++V A +D +
Sbjct: 279 AHAGVELYHSDDPGQPCGMIVNAAAAPEGGVDAL 312
>gi|209517029|ref|ZP_03265877.1| folate-binding protein YgfZ [Burkholderia sp. H160]
gi|209502560|gb|EEA02568.1| folate-binding protein YgfZ [Burkholderia sp. H160]
Length = 350
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 34/265 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + LS I G A FL + +T D+ L AR + + +G++L FL +
Sbjct: 39 AYMPLSQFGVIDTTGDDAASFLHSQLTNDIQHLDAANARLAGYCSAKGRLLASFLSWR-S 97
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 98 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLTDTSGELAVIGLAGDVRGALSGVFDALPD 157
Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151
R A L W + + + L I
Sbjct: 158 GVHVQVDGAAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRA 217
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 218 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 276
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234
D G+ + D G++V
Sbjct: 277 ELDTVRPGTEVFHSDDPGQPCGMIV 301
>gi|237746054|ref|ZP_04576534.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
gi|229377405|gb|EEO27496.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
Length = 337
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 118/321 (36%), Gaps = 60/321 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + + G A+ F+ ++ D+L L AR +A TPQG++L F + K E
Sbjct: 20 AVLLKQTGLLALEGDDAVSFIHGQLSNDILYLDAASARLAAYCTPQGRMLALFHVWKAEG 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111
L + R +L +L Y LR+ V + + +L +
Sbjct: 80 -RIWLMLPRDILPALQKRLQMYVLRAKVKLADESGKQAILGVGGRRAGAVLSRWFSTLPS 138
Query: 112 ----------------NSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+F R+ +A + + E D ++ I
Sbjct: 139 EPFGKVENGMGVLVRVGDAFGAPRYLLTVPLARLQEVESALSAELAMCDENSWALGDIEA 198
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + P ++ G+S KGCY GQEV++R Q+R +R+R
Sbjct: 199 GVPQITLP-VQDRFIPQMVNLEQTGGLSFKKGCYPGQEVIARSQYRGTVRRRMF--HAYM 255
Query: 212 DLP-----------PSGSPILTDDIEI-GTLGVVVGK-----KALAIARIDK-----VDH 249
+LP SG+ + E+ GTL + + LA+ R++ V
Sbjct: 256 ELPEGKSPAIDLNMASGADLFDAAGEVCGTLVMAARRDENRVDCLAVVRLEARETGTVHA 315
Query: 250 AIKKGMALT---VHGVRVKAS 267
G AL+ + G V+ +
Sbjct: 316 TKADGPALSWMPLSGSPVETT 336
>gi|186475806|ref|YP_001857276.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
gi|184192265|gb|ACC70230.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
Length = 349
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/302 (19%), Positives = 107/302 (35%), Gaps = 39/302 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L I G A FL + +T D L AR + +P+G++L FL+ ++
Sbjct: 41 PLPQFGVIDATGDDAASFLHSQLTNDTQHLDAATARLAGYCSPKGRLLASFLVW-CSGES 99
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------ 118
+ + + + ++ +L + LR+ + + + + + + S D
Sbjct: 100 IRMLVSKDVQPAVQKRLSMFVLRAKAKLSDASGDTLAIGLAGDVRKALSGIFDAIPDGVH 159
Query: 119 -----------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINHGIV 154
R A L W G ++ + + + L I G
Sbjct: 160 VKVDGPAGSLVRVPDAAGRLRYVWVGPKAEVEACLPALETKLRRVSPGVWDWLDIRAGEP 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDD 212
T + P D+L G++ KGCY GQEVV+R Q+R I++R + G +
Sbjct: 220 R-ITQRVVEQFVPQMINFDVLGGVNFRKGCYPGQEVVARSQYRGTIKRRMSLANVAGETE 278
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVRVKAS 267
G+ + D G++V A +D + A++ G L
Sbjct: 279 SVVPGAELFHSDDPGQPCGMLVNTAAAPDGGVDALVEIKLAALENGTVHLGAADGPALTF 338
Query: 268 FP 269
P
Sbjct: 339 LP 340
>gi|113969061|ref|YP_732854.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-4]
gi|113883745|gb|ABI37797.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-4]
Length = 318
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 21/230 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+
Sbjct: 21 LANLSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMLASFRTFAIQ- 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------- 111
D ++ + + + + +L Y + S + +L E
Sbjct: 80 DVLLMLMPKDTLELDLPQLQKYAVFSKATLSNASDEWTLLGVAGEQAVPFVTQHFGEITE 139
Query: 112 ------NSSFI--DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + +RF + T E D + L I G + +
Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATALVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILQGTTAL 248
>gi|171058559|ref|YP_001790908.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6]
gi|170776004|gb|ACB34143.1| folate-binding protein YgfZ [Leptothrix cholodnii SP-6]
Length = 319
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 90/271 (33%), Gaps = 30/271 (11%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L ++ G A+ FL + ++ DV L AR +A QG++L L +K
Sbjct: 11 ACRLPFWGVMRASGADAVSFLHSQLSNDVTRLDTGHARLAAYCNAQGRMLASLLYAKRSA 70
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------WNQEHTFSNSS 114
+ L + +L + LR+ + VL W + +
Sbjct: 71 EEVWLLCSADLLPVTLKRLSMFVLRAKARLSDASGELAVLGLAGQAGADWLGADAPAGAW 130
Query: 115 FIDERFSIADVLLHRTWGHN----------------EKIASDIKTYHELRINHGIVDPNT 158
ER V L G + L ++ GI P
Sbjct: 131 DKSERDGAMHVRLPDVAGVPRWLWIGPAAAAEAVLQALPVVAESDWQWLDVSAGIA-PVV 189
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
P +L+ G+ KGCY GQEVV+R Q+ +++R ++ P+
Sbjct: 190 AATSGQFVPQMLNYELVGGVDFKKGCYPGQEVVARSQYLGKLKRRAFLLASDVPAQPAQE 249
Query: 219 PILTDD--IEIGTL---GVVVGKKALAIARI 244
+ D G + LA+A +
Sbjct: 250 VFWSGDTGQPAGQVAWSATAPDGSHLALAEL 280
>gi|296284234|ref|ZP_06862232.1| aminomethyltransferase [Citromicrobium bathyomarinum JL354]
Length = 247
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56
M++ L N++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + +
Sbjct: 1 MTATRLQNRAVIRLSPTAAGEDVAGFLQGLLTNDVTG---ELPAYAALLSAQGKTMFDMI 57
Query: 57 ISK----IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ T +L+ + D L+ +L Y+LR IEI + + W+ E +
Sbjct: 58 VWPGRAGEHGATILLDCEADMADDLVKRLSLYRLRRK--IEIARDESLAVHWSVEAI--D 113
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
+ D R L HR + + R++ G+ + + I +
Sbjct: 114 AHPPDPRLP---ALGHRWLAPADDSEPADAAWLAHRLSLGVPEGRAEL--GDILWLETNA 168
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLG 231
L+G+S +KGCYIGQE +R+ R + +R +++ D + + L
Sbjct: 169 VELHGVSFSKGCYIGQENTARMNWRQKVNRRLVVVPLDRSEEKRRKAEYPDLGLAVDHLR 228
Query: 232 V--VVGKKALAIARIDKVD 248
V + AL R++ +
Sbjct: 229 VADITADLALGWMRLEAAE 247
>gi|257094049|ref|YP_003167690.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046573|gb|ACV35761.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 338
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 45/296 (15%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L++ I V G A FL +T+D+ L A+ SA + +G++L FL+ + D
Sbjct: 42 PLTHLRLIAVGGPEAAVFLHNQVTSDIKHLATDAAQHSAWCSAKGRMLASFLVFRSGAD- 100
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ L++ ++ +L + LRS V I N + H + + D
Sbjct: 101 YQLQLSADLLTMIVKRLQMFVLRSKVTIVDLSGNREIFGLAGPHAV--EALQALGLPVPD 158
Query: 125 VLLHRTWGHNEKI-----------------------------ASDIKTYHELRINHGIVD 155
L+ G + + L I GI
Sbjct: 159 GPLNTAVGSAGLVIRLDSARFQIVTSTEDAAALWRRLAAHARPVGTAVWQWLDIQAGIP- 217
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T+ P A + L G+S KGCY GQE+++R Q+ +++ L
Sbjct: 218 LITERTREEFVPQMANFERLGGVSFHKGCYPGQEIIARTQYLGKVKRHLYRAHSASPL-A 276
Query: 216 SGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+G I + G+V G ALA+ + + V +AL G
Sbjct: 277 AGDTIYSATSPDHPCGMVTNAAPAPAGGYDALAVVQENFVAGG---DLALAAPGGP 329
>gi|332525885|ref|ZP_08402026.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2]
gi|332109436|gb|EGJ10359.1| hypothetical protein RBXJA2T_08535 [Rubrivivax benzoatilyticus JA2]
Length = 318
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 58/300 (19%), Positives = 109/300 (36%), Gaps = 38/300 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L++ I+ G A FLQ +T +VL L R + + +G++L F++ +
Sbjct: 14 AVRLTDWGVIRASGNDAAAFLQGQLTQEVLRLDAGTVRLAGYCSAKGRLLASFVVWRRGP 73
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------------SW 104
F+L +++ +L + LR+ +E + +W
Sbjct: 74 AEFLLACSADLLPAVLKRLKMFVLRAQCQLEDASAEWPLWGLAGDAAAAALGAGAPAAAW 133
Query: 105 NQEHTFSNSSFID-------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
+ S + R+ A +A + + L + +
Sbjct: 134 RRVAPDEASELLRLDDVQGVPRWLFAGAEPP-VLPALPALAPEAWAW--LEVQSAVPRIV 190
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
P ++L+ G++ KGCY GQE+V+R Q+R +++R + P G
Sbjct: 191 A-ATVEQFVPQMVNLELVGGVNFQKGCYPGQEIVARSQYRGTLKRRAFLFDADAPAAP-G 248
Query: 218 SPILTDDIEIGTLGVVV-------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ D G+VV G A A+ + A+ G+AL + A P
Sbjct: 249 QDVYAADDPAQPAGMVVAAAPAPDGSGAWAVL-AETKIAALADGVALHLGAADGPALRPA 307
>gi|74318116|ref|YP_315856.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus
denitrificans ATCC 25259]
gi|74057611|gb|AAZ98051.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus
denitrificans ATCC 25259]
Length = 354
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 36/296 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS I + G FLQ +T DV LP A+ + +P+G++L FL + +D
Sbjct: 53 ADLSQLGVIALRGADTAGFLQGQLTNDVRNLPADGAQWNGYCSPKGRLLANFLAWRNGDD 112
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------- 108
+ L++ ++ +L + LR++V V L +
Sbjct: 113 -YCLQLSGDILAGVLKRLSMFILRADVKARDASEETVRLVVAGKDAAAAVRAAMGELPEA 171
Query: 109 ---TFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDP 156
T + ++ R SIA W + + A+ + + +R+N GI
Sbjct: 172 EMRTIALAAGQVVRVGDDKFVLSIAPERAAEVWQNLTRSATPVGAPVWDWMRLNAGIPMI 231
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P ++L+ G+S KGCY GQE+V+R Q+ +++R ++ + P
Sbjct: 232 VA-ATQEQFVPQMVNLELIGGVSFQKGCYPGQEIVARSQYLGKLKRRMVLAHADAEAAP- 289
Query: 217 GSPILTDDIEIGTLGVVVGKK-----ALAIARIDKVDHAIKKGMALT-VHGVRVKA 266
G + + D++ G VV + + +V+ A + + L GV +
Sbjct: 290 GDSLYSADLDGQASGTVVNAAPAPAGGFDLLAVVQVESANSQTLHLKSADGVALDL 345
>gi|281209059|gb|EFA83234.1| putative mitochondrial transferase [Polysphondylium pallidum PN500]
Length = 396
Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats.
Identities = 64/368 (17%), Positives = 119/368 (32%), Gaps = 99/368 (26%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL-----PYKIARGSAILTPQGKILLYFLIS 58
+ L+++S +KV G A+ +Q + T ++ L P + + L+ G++L ++
Sbjct: 15 IPLTSRSILKVSGPDAVKLVQGLTTNNMGRLVDSQAPSPTSLYTGFLSSTGRLLFDAVVF 74
Query: 59 KI--------------------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
E +++D I+ L +YK+R+ IE
Sbjct: 75 HQQNVEVISSSASRVAKSDGSSGEQQLFIDVDSEVASRAIEHLHYYKIRNKATIENVTEE 134
Query: 99 GVVLSW--------NQEHTFSN------SSFIDERFSIADVLLHRTWGHNEK-------- 136
+ S + F + + +D R + + N
Sbjct: 135 FALFSVLDKTYKSVRNDQLFEHLKQQKCTVMMDPRHDAMGLRILVPSSKNSMKNEVLSNY 194
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y+ R+ +GI D+ + P + DLLNG+ KGCY+GQE+ SR +
Sbjct: 195 PEEKEDVYNLYRVQNGIPQGVKDYSYDKVIPLEYNFDLLNGVDFHKGCYLGQELTSRTHY 254
Query: 197 RNIIRKRPMIITGTDD--------------------------LPPSGSPI---------- 220
+IRKR + + D PP+ + +
Sbjct: 255 TGLIRKRLFPVVMSSDSPKEHSVKKEHHLLFSQSVVDSLDVQAPPADTELKITILTGSTS 314
Query: 221 ---------------LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRV 264
+ LAI ++D +D A K + G +
Sbjct: 315 PFNEKQPHQHSNTPPPPPSRTTEKVISSYNNIGLAIVKVDHIDSASFKSTNIKDPKGRSL 374
Query: 265 KASFPHWY 272
+ P W+
Sbjct: 375 ELLEPCWW 382
>gi|323526019|ref|YP_004228172.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001]
gi|323383021|gb|ADX55112.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1001]
Length = 375
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 95/267 (35%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L+ I G A FL +T D L AR + + +G++L FL +
Sbjct: 64 AYAVLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 122
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
D L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 123 GDAIRLLVSKDVQAAVQKRLSMFILRAKAKLADASGELAVIGLAGDVRKALSGVFDALPD 182
Query: 119 --------------RFSIADVLLHRTW-GHNEKIASDIKT------------YHELRINH 151
R A L W G +I + + + L I
Sbjct: 183 GVHVKVDGAAGSLIRVPDACERLRYLWIGPKAQIEAQLPALGEKLKQVSPAVWDWLDIRA 242
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 243 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTSLANVAG 301
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D +G+ + D G+VV
Sbjct: 302 ELDSVKAGAELFHSDDPGQPCGMVVNA 328
>gi|171319766|ref|ZP_02908853.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
gi|171095002|gb|EDT40027.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
Length = 310
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 100/278 (35%), Gaps = 40/278 (14%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+ I V G A FL + +T D+ L AR S + +G++L FL +
Sbjct: 2 PLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGV 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VI 91
+L + + + ++ +L + LRS V
Sbjct: 62 RLL-VSKDVQAAVQKRLSMFVLRSKAKLTDASDTLAVVGFAGDVRNALSGIFDALPDGVH 120
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+++ G ++ +I R + D L G ++ + + L +
Sbjct: 121 VKVDGPAGALIRVPDAAGRKRYLWIGPRAEV-DARLAALGGTLPVVSPAVWDW--LDVRA 177
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G + P D++ ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 178 GEPRITQPAV-EQFVPQMVNFDVIGAVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVPG 236
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
D +G + + G+VV A +D +
Sbjct: 237 ETDTVHAGVELFHSEDAGQPCGMVVNAAAAPAGGVDAL 274
>gi|329119401|ref|ZP_08248087.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464546|gb|EGF10845.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 287
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 101/274 (36%), Gaps = 22/274 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L + I+ G FL ++ + L A + TP+G+++ +++
Sbjct: 1 MHTSLLPFFAVIRATGDDRASFLHGQLSNHIEALAEGEACYATYNTPKGRVIANMIVANT 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +L + ++++ +L + LR+ V EI +G ++ F
Sbjct: 61 GGE-LLLVLASDLAEAVVKRLRMFVLRAKVSFEILENHGAAGRLPDGTVPQPAAEPQLSF 119
Query: 121 S--IADVLLHRTWGH------------NEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
++D L+ H A+ + I G +
Sbjct: 120 PFHLSDGLIEIPLPHGGMFLTGETAVLPAHDAAAENAWKLHEIRSGYP-WICAATKESCV 178
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
+ G+ KGCY GQE+++R Q+R +++ ++ G +G+ +L D E
Sbjct: 179 AQMLNQHTIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAVLFG--GSVEAGAAVLQDLTE 236
Query: 227 IGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256
GT+ G+ +LA+ + + +
Sbjct: 237 AGTVINCADTPEGRLSLAVIKHSAAEGTLTDASG 270
>gi|332971574|gb|EGK10524.1| hypothetical protein HMPREF0476_0678 [Kingella kingae ATCC 23330]
Length = 282
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 92/266 (34%), Gaps = 17/266 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + IKV G FL + D+ L A + TP+G+++ + +D
Sbjct: 3 TQLPFFAIIKVSGDDRHDFLHNQFSNDINHLEKNYACYATYNTPKGRVIANLIAFNTGDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------FSNS 113
+L + + ++ +L + LR+ V +E+ P GV + F+ +
Sbjct: 63 -ILLILAADVAEKVVKRLKMFVLRAKVQLELLPDWGVAATLPDNAPTVLPKEPRLQFAAN 121
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIK---TYHELRINHGIVDPNTDFLPSTIFPHDA 170
+ + A L R A D+ ++ I G + T
Sbjct: 122 EAGEIQLPHAGSL--RIAPKASLPAHDVAIEQVWNAHEIACGYP-WISAVTSETCVAQML 178
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ G+ KGCY GQE+++R Q+R +++ + E G +
Sbjct: 179 NQHKIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAVARNAVSQNAGAEVQDAAGAEAGIV 238
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMA 256
G L + + V ++
Sbjct: 239 INSAGSLHLLVVKHGSVAGELRDAAG 264
>gi|15603739|ref|NP_246813.1| hypothetical protein PM1874 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722304|gb|AAK03958.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 294
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 13/226 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + +++ G+ A +LQ +T DV L + +A +GKI F + +
Sbjct: 15 CDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQ 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
TF L + + + +D+L Y + S V P + ++ E + ID + +
Sbjct: 75 TFYLLVKKGLLPTALDQLKKYAVFSKVTF--TPCDWQIIGLAGEKIINACDEIDAQIRVT 132
Query: 124 -------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175
+L+H T + AS + + L I GI + + + P + L
Sbjct: 133 LSSQQPRVILIHPTALDLQANASHV-VWDLLDIQDGIPLLSPE-TQAEFIPQALNLQCLE 190
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPM-IITGTDDLPPSGSPI 220
+ IS KGCYIGQE+V+R ++R ++ + + ++P S +
Sbjct: 191 HAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEV 236
>gi|170692440|ref|ZP_02883603.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M]
gi|170142870|gb|EDT11035.1| folate-binding protein YgfZ [Burkholderia graminis C4D1M]
Length = 358
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 93/267 (34%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L+ I G A FL +T D L AR + + +G++L FL +
Sbjct: 47 AYAVLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 105
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 106 GDTLRLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVIGLAGDVRKALSGVFDALPD 165
Query: 119 --------------RFSIADVLLHRTW--------GHNEKIASDIKT-----YHELRINH 151
R A L W H + + + L I
Sbjct: 166 GVHVKVDGAAGSLIRVPDAFERLRYLWIGPKAQVEAHLPSLGEKLTQVSPAVWDWLDIRA 225
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 226 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 284
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D +G + D G+VV
Sbjct: 285 ELDTVKAGVELFHSDDPGQPCGMVVNA 311
>gi|237748463|ref|ZP_04578943.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
gi|229379825|gb|EEO29916.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
Length = 333
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 98/272 (36%), Gaps = 43/272 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L + + G+ A+ F+ ++ D+ L AR +A PQG++L F K
Sbjct: 21 VLLKQTGLLALEGEDAVSFIHGQLSNDIEHLGSSQARLAAYCNPQGRMLALFHAWKSSG- 79
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111
L + +L +L Y LR+ V + + N +L E
Sbjct: 80 KVWLTVPLDILPALQKRLQMYVLRAKVTLSDESGNMAILGIGGEKGGEALSKWFETLPSE 139
Query: 112 ---------------NSSFIDER--FSIADVLLHRTWGHNEKIAS--DIKTYHELRINHG 152
+F R +IA+ L S D + I G
Sbjct: 140 PFGKTENEFGVLVRVADAFGFPRYLLTIAEKRLQVVESELSSTLSVCDESGWTMGDIKAG 199
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----IT 208
+ + P ++ G+S KGCY GQEV++R Q++ +++R +
Sbjct: 200 VPQITLP-VQDRFIPQMVNLEQAGGLSFKKGCYPGQEVIARSQYKGTVKRRMFHGMVELP 258
Query: 209 GTDDLP-----PSGSPILTDDIEI-GTLGVVV 234
D+ P +G+ I+ D ++ GT+
Sbjct: 259 FEDNPPIDVNMTAGANIVDSDGQVCGTIVSSA 290
>gi|260913200|ref|ZP_05919682.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325]
gi|260632787|gb|EEX50956.1| folate-binding protein YgfZ [Pasteurella dagmatis ATCC 43325]
Length = 292
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 11/225 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + I++ G+ A +LQ +T DV L +A P+GK++ F + + E
Sbjct: 16 CQLQQYTLIEIKGEDAEKYLQGQLTCDVTKLEIGQTTLTAHCDPKGKMVSLFRLIRTEAQ 75
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122
F + I +S + +D L Y + S V +N ++ E T S I+ + I
Sbjct: 76 CFYVLIKKSLLPTALDLLKKYAVFSKVTF--TELNWQIIGLAGETTCKAFSDINAQIRID 133
Query: 123 -----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLN 176
LL + + + L I G+ + P + +
Sbjct: 134 IQTQQPRTLLIHPTSLDITPNMPYQIWDLLDIQDGMPLLSAQ-TQGEFIPQALNVQSIEQ 192
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220
GIS KGCYIGQE+V+R ++R ++ + G + P GS +
Sbjct: 193 GISFQKGCYIGQEIVARAKYRGANKRAMFTLVGNSIETPEIGSEV 237
>gi|295676545|ref|YP_003605069.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002]
gi|295436388|gb|ADG15558.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1002]
Length = 355
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 94/267 (35%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + LS I G A FL A +T DV L AR + + +G++L FL +
Sbjct: 44 AYMPLSQFGVIDTTGDDAASFLHAQLTNDVQHLDAANARLAGYCSAKGRLLASFLSWR-S 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 103 GDTIRLLVSKDVQAAVQKRLSMFVLRAKAKLVDASGELAVVGLAGDVRGALSGVFDALPD 162
Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151
R A L W + + + L I
Sbjct: 163 GVHVQVDGTAGTLIRVPDALERLRYLWIGPKAQVEALLPSLDGKLKRVSPAVWDWLDIRA 222
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 223 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 281
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D G + D G++V
Sbjct: 282 ELDTVRPGVELFHSDDPGQPCGMIVNA 308
>gi|307729686|ref|YP_003906910.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003]
gi|307584221|gb|ADN57619.1| folate-binding protein YgfZ [Burkholderia sp. CCGE1003]
Length = 374
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 93/263 (35%), Gaps = 34/263 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I G A FL +T D L AR + + +G++L FL + DT
Sbjct: 67 LTQFGVIDATGDDAAAFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-SGDTL 125
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
L + + + ++ +L + LR+ + V+ + + S D
Sbjct: 126 RLLVSKDLQAAVQKRLSMFILRAKAKLADASGELAVIGLAGDVRKALSGVFDALPDGVHV 185
Query: 119 ----------RFSIADVLLHRTW--------GHNEKIASDIKT-----YHELRINHGIVD 155
R A L W H + ++ + L I G
Sbjct: 186 KVDGAAGSLIRVPDAFERLRYLWIGPKAQIEAHLPALGEKLQQVSPAVWDWLDIRAGEPR 245
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDL 213
T + P D+L ++ KGCY GQEVV+R Q+R I++R + G D
Sbjct: 246 -ITQPVVEQFVPQMVNFDVLGAVNFKKGCYPGQEVVARSQYRGTIKRRTSLANVAGELDT 304
Query: 214 PPSGSPILTDDIEIGTLGVVVGK 236
+G + D G+VV
Sbjct: 305 VKAGVELFHSDDPGQPCGMVVNA 327
>gi|149186024|ref|ZP_01864339.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21]
gi|148830585|gb|EDL49021.1| predicted aminomethyltransferase [Erythrobacter sp. SD-21]
Length = 244
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 1 MSSVYLSNQSFIKVCGKS----AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56
M++ L++++ +++ FLQ ++T+DV + + +LTPQGK L +
Sbjct: 1 MTATRLTSRAIVRLTPADDSESIADFLQGLLTSDVKQA---LPVYAGLLTPQGKALFDMI 57
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ +D +L+ + + L +L Y+LR + I + GV E +
Sbjct: 58 VWPAGDDGLLLDCEAEIAEELAKRLSLYRLRRKIDIAVDDTVGVHW----EGHTGDGGAP 113
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D R + E S + Y R++ G+ + + I + L+
Sbjct: 114 DPRLAALGQRW--LAPVAEDEGSADEAYRAHRLSLGVPEGRAEL--GDILWLETNAVELH 169
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
G++ KGCYIGQE +R+ R+ I +R +++
Sbjct: 170 GVAFDKGCYIGQENTARMNWRSKINRRLVVV 200
>gi|134094618|ref|YP_001099693.1| hypothetical protein HEAR1394 [Herminiimonas arsenicoxydans]
gi|133738521|emb|CAL61566.1| putative Glycine cleavage T protein (aminomethyl transferase)
[Herminiimonas arsenicoxydans]
Length = 352
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 60/296 (20%), Positives = 110/296 (37%), Gaps = 41/296 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+YL I G A FL + +T DV L AR + +P+G++L LI K
Sbjct: 46 PIIYL---GLIAASGDEAAHFLHSQLTNDVEHLDAGAARLAGYCSPKGRLLASLLIWKTA 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------N 112
D +L++ R + S+ +L + LR+ + N V+L
Sbjct: 103 -DGIMLQLPRELQASVQKRLQMFVLRAKARLIDATENHVMLGLAGPAASKVLQQWFPVLP 161
Query: 113 SSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHEL---------------RIN 150
++ D+ S A L+ + A ++ + +L I+
Sbjct: 162 AAIYDKAESAAGTLIRHPDAFGTARYQWITTAAQAVEAWPQLTKVLQAAGAAAWQLAEID 221
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + P +L+ G++ KGCY GQE+V+R Q+ +++R + +
Sbjct: 222 SGVPHISI-ATQEKFVPQMINFELIGGVNFRKGCYPGQEIVARSQYLGKLKRRMLHAKVS 280
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ I + G+VV + R + + A + L V+
Sbjct: 281 AASAEPGTEIFSVSDPEQPCGMVVNAE-----RTNAQEIACLVEIKLAAAESEVRL 331
>gi|157960459|ref|YP_001500493.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
gi|157845459|gb|ABV85958.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
Length = 323
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 94/259 (36%), Gaps = 23/259 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ F+ +T D+ +L R A P+GK+L F +DT
Sbjct: 24 LSHLGLISVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAK-DDTL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ + + + +L Y + S + ++L E + + S
Sbjct: 83 FIMMPKDTLALDLPQLQKYAVFSKAELADISDAWLLLGVAGEQANAWLTAQFGELSAELT 142
Query: 123 ---ADVLLHRT---------------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
++LH E+ D + L I G +
Sbjct: 143 LIDGGIILHDAGRYIVAIDKTHADAFIAKIEQPIFDASAWQTLEILAGYPNLGASH-QGQ 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY+GQE V+R+++R ++ I++G P + L
Sbjct: 202 FVPQMCNVQAVNGISFNKGCYMGQETVARMKYRGGNKRALYIVSGKVSAPLTADSQLEIA 261
Query: 225 IEIGTLGVVVGKKALAIAR 243
+E G G A+ R
Sbjct: 262 LEDGEGFRRAGTIIEAVQR 280
>gi|238759289|ref|ZP_04620455.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236]
gi|238702450|gb|EEP95001.1| tRNA-modifying protein ygfZ [Yersinia aldovae ATCC 35236]
Length = 330
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS DS + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRSLLDSQLSELKKYAVFSKVVIAPQPDVVLLGIAGTAAKTALAEVFTELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T + S ERF A L+ G + ++ K + L I
Sbjct: 139 STEHPVVQQGQSTLLHFSLPAERFLLVTDAEQAQQLVATLSGSAQF--NNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G +++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDSE-SSAQFIPQATNIQALNGISFSKGCYSGQEMVARAKYRGANKRALYWLAGH 255
Query: 211 DD-LPPSGSPI 220
+ +P +G +
Sbjct: 256 ANRVPAAGEDL 266
>gi|160873993|ref|YP_001553309.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS195]
gi|160859515|gb|ABX48049.1| folate-binding protein YgfZ [Shewanella baltica OS195]
gi|315266222|gb|ADT93075.1| folate-binding protein YgfZ [Shewanella baltica OS678]
Length = 320
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117
F+L + + + + +L Y + S + +L E F + F D
Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFLSEHFGDIHQ 139
Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+RF + ++ D + L I G +
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258
Query: 219 PILTDD 224
I +D
Sbjct: 259 EIAMED 264
>gi|322513844|ref|ZP_08066926.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976]
gi|322120331|gb|EFX92270.1| folate-binding protein YgfZ [Actinobacillus ureae ATCC 25976]
Length = 295
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 13/226 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS I++ G A +LQ +T DV L ++ P+GK+ + +
Sbjct: 16 CVQLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTSHCDPKGKMSALIRLYRQAA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDER 119
D F+ I +++L Y + S V PI GV N ++ + +
Sbjct: 76 DKFVAMIHVDLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQ 135
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
+ WG + +D + + + I G+ + P + + N I
Sbjct: 136 GQKRAI----VWGETLETNADSQLWDLINIQDGVP-ILLKANQFELIPQATNLQAVENAI 190
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMII----TGTDDLPPSGSPI 220
S TKGCYIGQE V+R ++R ++ + G LP G I
Sbjct: 191 SFTKGCYIGQETVARAKYRGANKRAMFTLVGKFEGEVSLPEIGGSI 236
>gi|238795222|ref|ZP_04638807.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909]
gi|238725442|gb|EEQ17011.1| tRNA-modifying protein ygfZ [Yersinia intermedia ATCC 29909]
Length = 330
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 33/250 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS D+ + +L Y + S V I QP ++
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVTIAAQPDAVLLGIAGAQAKAALAEVFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
++ T + S ERF + L T + ++ K + L I
Sbjct: 139 SAEHPVTQQGNSTLLHFSLPAERFLLVTDAEQAQQLVATLADRAQF-NNSKQWLALDIEA 197
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 198 GLPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGAA 256
Query: 212 D-LPPSGSPI 220
+P +G +
Sbjct: 257 SRVPAAGEDL 266
>gi|304411119|ref|ZP_07392735.1| folate-binding protein YgfZ [Shewanella baltica OS183]
gi|307301758|ref|ZP_07581516.1| folate-binding protein YgfZ [Shewanella baltica BA175]
gi|304350654|gb|EFM15056.1| folate-binding protein YgfZ [Shewanella baltica OS183]
gi|306913796|gb|EFN44217.1| folate-binding protein YgfZ [Shewanella baltica BA175]
Length = 320
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117
F+L + + + + +L Y + S + +L E F + F D
Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASQFVSEHFGDIHQ 139
Query: 118 --------------ERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFL 161
+RF + + S D + L I G +
Sbjct: 140 EFTPIEHGAILKDADRFILMLAPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258
Query: 219 PILTDD 224
I +D
Sbjct: 259 EIAMED 264
>gi|330817243|ref|YP_004360948.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
gi|327369636|gb|AEA60992.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
Length = 346
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 110/306 (35%), Gaps = 44/306 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS I V G A FL + +T D+ L + + T +G++L FL + E
Sbjct: 37 YAPLSQFGIIDVAGDDAATFLHSQLTNDIEHLDAAGVKLAGYCTAKGRLLASFLAWRSES 96
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSN--SSFIDE- 118
+L + + + ++ +L + LR+ + + + V ++ S + D
Sbjct: 97 GVRLL-VSKDIQPAVQKRLSMFVLRAKAKLSDAAGLVAVGIAGEAREALSGLFEALPDGV 155
Query: 119 ------------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRINH 151
R AD W G +++ + + E+R
Sbjct: 156 HTKLDGPAGTLIRLPDADGRARYLWIASREQFEAGAAVLDGKLARVSPAVWDWLEIRAAE 215
Query: 152 G-IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIIT 208
I P + P D++ ++ KGCY GQE+V+R Q+R I++R + +
Sbjct: 216 PRITQPVVE----QFVPQMLNYDVIGAVNFRKGCYPGQEIVARSQYRGTIKRRAALVHVE 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH----AIKKGMA-LTVHGVR 263
G D +G + + G++V A +D + A + G L
Sbjct: 272 GETDTVRAGIELFHSEDPGQPCGMIVNAAAAPAGGVDALAEIKLAAQESGTVHLGAADGP 331
Query: 264 VKASFP 269
A P
Sbjct: 332 ALAFLP 337
>gi|186896605|ref|YP_001873717.1| putative global regulator [Yersinia pseudotuberculosis PB1/+]
gi|226730812|sp|B2K0P7|YGFZ_YERPB RecName: Full=tRNA-modifying protein ygfZ
gi|186699631|gb|ACC90260.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
Length = 330
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108
E +E RS D+ + +L Y + S V+IE QP GV S +
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T + S ERF A L+ + G + +D K + L I
Sbjct: 139 STEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 256 ASRVPAAGEDL 266
>gi|238763222|ref|ZP_04624187.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638]
gi|238698495|gb|EEP91247.1| tRNA-modifying protein ygfZ [Yersinia kristensenii ATCC 33638]
Length = 330
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 34/249 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E R+ D+ + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRNVLDNQLRELKKYAVFSKVVIAAQPDAALLGVAGAQAKTALAGIFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T + S ERF A L+ + ++ +D K + L I
Sbjct: 139 DAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVEKL--SDQAQLNDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G+
Sbjct: 197 AGFPIIDTD-NSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGS 255
Query: 211 DDLPPSGSP 219
P+
Sbjct: 256 ASRVPTAGE 264
>gi|309972377|gb|ADO95578.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 280
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I L D K + I G+ + + + P + + IS
Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGTNKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|269101838|ref|ZP_06154535.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161736|gb|EEZ40232.1| glycine cleavage T-protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 35/273 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G+ A +LQ +T DV++LP + + A +GK+ F +
Sbjct: 21 LAVIDLHDWAAVTLVGQDAKSYLQGQVTCDVVSLPEQESTLGAHCDAKGKMRTIFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
++ ++ +S DS + +L Y + S V I+ + ++ + F + F
Sbjct: 81 QQGYAYIQ-RQSVMDSQLPELKKYAVFSKVEIKPSNEVILGIAGSDAQAFIDQHFNGTSN 139
Query: 116 -----------IDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
IDE+ +A+ L+H D + I + +
Sbjct: 140 VRHHDQGSAIKIDEQRWQLLISPELAEQLIHALPEK--ATCCDSTLWDLYDIRAALPRID 197
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPS 216
+ P + ++GIS KGCY+GQE V+R ++R I ++ I+TG D P +
Sbjct: 198 SAIELE-FIPQALNLQAVDGISFKKGCYVGQETVARAKYRGINKRAMFIVTGHADHAPQA 256
Query: 217 GSPIL----TDDIEIGTLGVV---VGKKALAIA 242
G I + GT+ ALA+
Sbjct: 257 GDSIERQVGENWRSGGTVITGYHFSDNHALALV 289
>gi|240948853|ref|ZP_04753209.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305]
gi|240296668|gb|EER47279.1| hypothetical protein AM305_08129 [Actinobacillus minor NM305]
Length = 295
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS I++ G A +LQ +T DV L ++ P+GK+ + + E
Sbjct: 16 CILLSQYRLIEIAGIDAEKYLQGQLTCDVSKLAIGEHTLTSHCDPKGKMSALLRLYRAEA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVV----LSWNQEHTFSNSSFI 116
+ F I + + +L Y + S V + + GV L+ QE++ + +
Sbjct: 76 ERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGVTDFERLAKQQENSTALALTQ 135
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175
++ +I WG +D + + I G+ + P A + +
Sbjct: 136 GQKRAI-------VWGEEFAPNADTTLWDLMDIQDGLP-ILLKANQFELIPQAANLQAVE 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220
N IS TKGCYIGQE V+R ++R ++ + G DLP + I
Sbjct: 188 NAISFTKGCYIGQETVARAKYRGANKRAMFTLVGKVAEEVDLPQPATSI 236
>gi|22127159|ref|NP_670582.1| putative global regulator [Yersinia pestis KIM 10]
gi|45443330|ref|NP_994869.1| putative global regulator [Yersinia pestis biovar Microtus str.
91001]
gi|108806367|ref|YP_650283.1| putative global regulator [Yersinia pestis Antiqua]
gi|108813258|ref|YP_649025.1| putative global regulator [Yersinia pestis Nepal516]
gi|145597923|ref|YP_001161999.1| putative global regulator [Yersinia pestis Pestoides F]
gi|150260090|ref|ZP_01916818.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125]
gi|162420968|ref|YP_001608147.1| putative global regulator [Yersinia pestis Angola]
gi|165924945|ref|ZP_02220777.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937370|ref|ZP_02225934.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010263|ref|ZP_02231161.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212747|ref|ZP_02238782.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399919|ref|ZP_02305437.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418709|ref|ZP_02310462.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425340|ref|ZP_02317093.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167467686|ref|ZP_02332390.1| putative aminomethyltransferase [Yersinia pestis FV-1]
gi|170023124|ref|YP_001719629.1| putative global regulator [Yersinia pseudotuberculosis YPIII]
gi|218928072|ref|YP_002345947.1| putative global regulator [Yersinia pestis CO92]
gi|229837585|ref|ZP_04457747.1| predicted folate-dependent regulatory protein [Yersinia pestis
Pestoides A]
gi|229840808|ref|ZP_04460967.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842633|ref|ZP_04462788.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903714|ref|ZP_04518827.1| predicted folate-dependent regulatory protein [Yersinia pestis
Nepal516]
gi|270487493|ref|ZP_06204567.1| folate-binding protein YgfZ [Yersinia pestis KIM D27]
gi|294502935|ref|YP_003566997.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003]
gi|118578000|sp|Q1CB34|YGFZ_YERPA RecName: Full=tRNA-modifying protein ygfZ
gi|118578001|sp|Q7CGT3|YGFZ_YERPE RecName: Full=tRNA-modifying protein ygfZ
gi|118578002|sp|Q1CF05|YGFZ_YERPN RecName: Full=tRNA-modifying protein ygfZ
gi|166979591|sp|A4TIB4|YGFZ_YERPP RecName: Full=tRNA-modifying protein ygfZ
gi|226730813|sp|A9R4L4|YGFZ_YERPG RecName: Full=tRNA-modifying protein ygfZ
gi|226730814|sp|B1JNT4|YGFZ_YERPY RecName: Full=tRNA-modifying protein ygfZ
gi|21960221|gb|AAM86833.1|AE013929_6 hypothetical protein y3283 [Yersinia pestis KIM 10]
gi|45438199|gb|AAS63746.1| Predicted aminomethyltransferase related to GcvT [Yersinia pestis
biovar Microtus str. 91001]
gi|108776906|gb|ABG19425.1| hypothetical protein YPN_3098 [Yersinia pestis Nepal516]
gi|108778280|gb|ABG12338.1| hypothetical protein YPA_0370 [Yersinia pestis Antiqua]
gi|115346683|emb|CAL19566.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209619|gb|ABP39026.1| hypothetical protein YPDSF_0617 [Yersinia pestis Pestoides F]
gi|149289498|gb|EDM39575.1| hypothetical protein YPE_2368 [Yersinia pestis CA88-4125]
gi|162353783|gb|ABX87731.1| putative aminomethyltransferase [Yersinia pestis Angola]
gi|165914844|gb|EDR33457.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923145|gb|EDR40296.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990749|gb|EDR43050.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166206039|gb|EDR50519.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962703|gb|EDR58724.1| putative aminomethyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050627|gb|EDR62035.1| putative aminomethyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055740|gb|EDR65524.1| putative aminomethyltransferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749658|gb|ACA67176.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
gi|229679484|gb|EEO75587.1| predicted folate-dependent regulatory protein [Yersinia pestis
Nepal516]
gi|229690943|gb|EEO82997.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697174|gb|EEO87221.1| predicted folate-dependent regulatory protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704273|gb|EEO91284.1| predicted folate-dependent regulatory protein [Yersinia pestis
Pestoides A]
gi|262360970|gb|ACY57691.1| hypothetical protein YPD4_0782 [Yersinia pestis D106004]
gi|262364910|gb|ACY61467.1| hypothetical protein YPD8_0777 [Yersinia pestis D182038]
gi|270335997|gb|EFA46774.1| folate-binding protein YgfZ [Yersinia pestis KIM D27]
gi|294353394|gb|ADE63735.1| hypothetical protein YPZ3_0825 [Yersinia pestis Z176003]
gi|320014025|gb|ADV97596.1| putative folate-dependent regulatory protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 330
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108
E +E RS D+ + +L Y + S V+IE QP GV S +
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T + S ERF A L+ + G + +D K + L I
Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 256 ASRVPAAGEDL 266
>gi|56459928|ref|YP_155209.1| aminomethyltransferase [Idiomarina loihiensis L2TR]
gi|56178938|gb|AAV81660.1| Predicted aminomethyltransferase, GcvT family [Idiomarina
loihiensis L2TR]
Length = 297
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 9/247 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV L++ + V G+ A FLQ +T D+ L A GK F + + E+
Sbjct: 17 SVQLTDYGILSVSGEDADSFLQGQLTCDLRKLDQDNCLYGAHCDQTGKAFSIFWLYR-ED 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-S 121
D L + RS + + +L + + S V IE + + S ++ D R
Sbjct: 76 DAVFLIMHRSAIEGSLAQLKKFGVFSKVTIEDVSDDWSIAGVFGSKAASVAAEFDGRVMQ 135
Query: 122 IADVLLHRTWGHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ + I++D + L I ++ + P + + +GIS
Sbjct: 136 VGTSPDQYLLLSQQPISTDYPQPYWDALEIERVRPQLTSENI-QAFVPQMMNLQVWDGIS 194
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCYIGQE ++R+++ ++ ++G +G+ + + IG G
Sbjct: 195 FDKGCYIGQETIARMKYLGKQKRALFRLSGKVTAQVTAGTQL---EKAIGENWRRAGTVI 251
Query: 239 LAIARID 245
+A+ R D
Sbjct: 252 MAVNRTD 258
>gi|126175700|ref|YP_001051849.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS155]
gi|125998905|gb|ABN62980.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS155]
Length = 320
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 26/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFID--- 117
F+L + + + + +L Y + S + + ++ Q F + F D
Sbjct: 81 ALFML-MPKDAIEVDLPQLQKYAVFSKATLSNASAEWTLIGVAGEQASLFVSEHFGDIHQ 139
Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+RF + ++ D + L I G +
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEIIAGYPNLAASHA 199
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258
Query: 219 PILTDD 224
I +D
Sbjct: 259 EIAMED 264
>gi|148825254|ref|YP_001290007.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE]
gi|148715414|gb|ABQ97624.1| hypothetical protein CGSHiEE_00660 [Haemophilus influenzae PittEE]
Length = 280
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I L D K + I G+ + + + P + + IS
Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|307262639|ref|ZP_07544269.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306872062|gb|EFN03776.1| hypothetical protein appser13_680 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 279
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 13/223 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I++ G A +LQ +T DV L + P+GK+ + + D F
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAADKF 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122
I I +++L Y + S V PI GV N ++ + +
Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181
+ WG + +D + + + I GI + P + + N IS +
Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPI 220
KGCYIGQE V+R ++R ++ + G D LP G +
Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEIGGSV 220
>gi|148827663|ref|YP_001292416.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
gi|148718905|gb|ABR00033.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
Length = 280
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEKRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|187923927|ref|YP_001895569.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN]
gi|187715121|gb|ACD16345.1| folate-binding protein YgfZ [Burkholderia phytofirmans PsJN]
Length = 357
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 93/267 (34%), Gaps = 34/267 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L+ I G A FL +T D L AR + + +G++L FL +
Sbjct: 46 AYMPLTQFGVIDATGDDAASFLHGQLTNDTQHLDAANARLAGYCSAKGRLLASFLTWR-S 104
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
DT L + + ++ +L + LR+ + V+ + + S D
Sbjct: 105 GDTIRLLASKDVQAAVQKRLSMFVLRAKAKLVDASGELAVIGLAGDVRKALSGVFDALPD 164
Query: 119 --------------RFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINH 151
R A L W + + + L I
Sbjct: 165 GVHVKVDGAAGSLIRVPDALGHLRFLWIGPKAQVESLLPLLEEKLKRVSPAVWDWLDIRA 224
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITG 209
G T + P D+L ++ KGCY GQEVV+R Q+R I++R + G
Sbjct: 225 GEPR-ITQPVVEQFVPQMVNFDVLGAVNFRKGCYPGQEVVARSQYRGTIKRRTSLANVAG 283
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK 236
D +G+ + D G+VV
Sbjct: 284 ELDTVHAGAELFHSDDPGQPCGMVVNA 310
>gi|229846552|ref|ZP_04466660.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
gi|229810645|gb|EEP46363.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
Length = 280
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|152999373|ref|YP_001365054.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
gi|151363991|gb|ABS06991.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
Length = 320
Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 26/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I++
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLASFRTFAIQD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFID--- 117
F+L + + + + +L Y + S + +L E F + F D
Sbjct: 81 ALFML-MPKDTIEVDLPQLQKYAVFSKATLSNASAEWTLLGVAGEQASLFVSEHFGDIHQ 139
Query: 118 --------------ERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+RF + ++ D + L I G +
Sbjct: 140 EFTPIEHGAILKDADRFILMLTPEAAAALVAKSKLSVFDASAWQALEITAGYPNLAASHA 199
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
P + +NGIS KGCY+GQE ++R+++R ++ I+ G +L SG
Sbjct: 200 SQ-YVPQMCNLQAVNGISFNKGCYMGQETIARMKYRGGNKRALYILHGHTNLQISLESGL 258
Query: 219 PILTDD 224
I +D
Sbjct: 259 EIAMED 264
>gi|307247033|ref|ZP_07529087.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307249255|ref|ZP_07531252.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251578|ref|ZP_07533485.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256077|ref|ZP_07537865.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307260509|ref|ZP_07542203.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306856485|gb|EFM88634.1| hypothetical protein appser2_320 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306858779|gb|EFM90838.1| hypothetical protein appser4_720 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861042|gb|EFM93048.1| hypothetical protein appser6_1020 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865499|gb|EFM97394.1| hypothetical protein appser10_830 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869821|gb|EFN01604.1| hypothetical protein appser12_840 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 279
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 22/275 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I++ G A +LQ +T DV L + P+GK+ + + D F
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKMSALIRLYRQAADKF 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122
I I +++L Y + S V PI GV N ++ + +
Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181
+ WG + +D + + + I GI + P + + N IS +
Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKK 237
KGCYIGQE V+R ++R ++ + G D LP G + ++++G G
Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRATGTI 234
Query: 238 ALAIARIDKV------DHAIKKGMALTVHGVRVKA 266
++A +K+ ++ ++ A ++GV +
Sbjct: 235 LNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 269
>gi|145640439|ref|ZP_01796023.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021]
gi|145275025|gb|EDK14887.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.4-21]
Length = 280
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|319427571|gb|ADV55645.1| folate-binding protein YgfZ [Shewanella putrefaciens 200]
Length = 318
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
F+L + + + + +L Y + S + +L E
Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139
Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
N + + + VL T E D + L I G +
Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAEHTVFDATAWQALEIAAGYPNLAASHAHQ 199
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|238786189|ref|ZP_04630139.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970]
gi|238712906|gb|EEQ04968.1| tRNA-modifying protein ygfZ [Yersinia bercovieri ATCC 43970]
Length = 330
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS D+ + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVITAQPEAVLLGIAGAQARAALAELFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T + S ERF A L+ + + ++ + + L I
Sbjct: 139 DAEHPVLQQGSSTLLHFSLPAERFLLVTDTEQAQQLIDKLADSAQ--LNNSQQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDAD-TSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGQ 255
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 256 ASRVPAAGEDL 266
>gi|223041896|ref|ZP_03612082.1| hypothetical protein AM202_0492 [Actinobacillus minor 202]
gi|223017312|gb|EEF15737.1| hypothetical protein AM202_0492 [Actinobacillus minor 202]
Length = 295
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS I++ G A +LQ +T DV L ++ P+GK+ + + E
Sbjct: 16 CILLSQYRLIEIAGVDAEKYLQGQLTCDVAKLAVGEHTLTSHCDPKGKMSALLRLYRAEA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSSFI 116
+ F I + + +L Y + S V + + +L+ QE++ + S
Sbjct: 76 ERFFAIIHQDLLPEALVQLKKYAVFSKVTFTEKETALYGITDFELLAKCQENSTALSLTQ 135
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL- 175
++ +I WG ++ + + I G+ + + P A + +
Sbjct: 136 GQKRAI-------VWGEELAPNAEAALWDLMDIQDGLPILLKE-NQFELIPQAANLQAVE 187
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPI 220
N IS TKGCYIGQE V+R ++R ++ + G DLP + I
Sbjct: 188 NAISFTKGCYIGQETVARAKYRGANKRAMFTLVGEVAEKVDLPQPATSI 236
>gi|299529313|ref|ZP_07042752.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni S44]
gi|298722691|gb|EFI63609.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni S44]
Length = 318
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 20/253 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D
Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSAD 72
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110
+L DRS + +L + LR+ + + + +
Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALK 132
Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165
+ + + A G + + + G+ + +
Sbjct: 133 QQGDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + +
Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250
Query: 226 EIGTLGVVVGKKA 238
G VV A
Sbjct: 251 LEQATGTVVQAAA 263
>gi|16272414|ref|NP_438627.1| hypothetical protein HI0466 [Haemophilus influenzae Rd KW20]
gi|260580471|ref|ZP_05848299.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
gi|1175250|sp|P44000|Y466_HAEIN RecName: Full=Uncharacterized protein HI_0466
gi|1573444|gb|AAC22125.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092813|gb|EEW76748.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
Length = 280
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T + S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPNFSLEIDEKRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKVQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|302694057|ref|XP_003036707.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8]
gi|300110404|gb|EFJ01805.1| hypothetical protein SCHCODRAFT_230715 [Schizophyllum commune H4-8]
Length = 391
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 73/360 (20%), Positives = 133/360 (36%), Gaps = 91/360 (25%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ ++N++ + V G A+ FL ++ ++V +A L PQG++L +
Sbjct: 15 TVAPVANRALLAVTGSQAVEFLNGLVASEVH--APHKPFYTAFLHPQGRVLHDAFVYTTT 72
Query: 62 EDT-----FILEIDR---SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHT--- 109
+ T +++E D +L D L Y LRS V + ++ V +W
Sbjct: 73 DPTSGAKGYVIEYDTRPGELSTALPDLLKRYILRSKVKLRDVTNEYDVWQAWGSPQAERF 132
Query: 110 --------FSNSSFIDERFSIADVLLHRTW--------------------GHNEKIASD- 140
F+ S ++ + + + TW G + ASD
Sbjct: 133 WDHERRWAFAKSGAVEPAWDVLNAWPWGTWDLALHDRRAPGMGTRMLVRKGDKPEAASDH 192
Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y RI HG+ + D P+ FP ++ +D++ G++ KGCY+GQE+ R H
Sbjct: 193 DIASTDAYKLHRILHGVPEGTADIPPTQAFPMESNLDIMGGLNFRKGCYVGQELTVRTYH 252
Query: 197 RNIIRKRPMIITGTDD-------LPPSGSPILTDDIEI---------------------- 227
++RKR + + P +P L ++I +
Sbjct: 253 TGVVRKRILPVALHLPGERPTLVQPSPTAPHLPENIAVNARIAPQPDTPSPDQPHKRIPR 312
Query: 228 ----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV------HGVRVKAS-----FPHWY 272
G L + LA+ R+++V A + + G V +PHW+
Sbjct: 313 PRGTGKLLSNIHGVGLALLRLEQVKGAEAGDLRFELDVPTSGDGSEVTQIEASHWWPHWW 372
>gi|145636266|ref|ZP_01791935.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH]
gi|145270431|gb|EDK10365.1| hypothetical protein CGSHiHH_07311 [Haemophilus influenzae PittHH]
Length = 280
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|145632732|ref|ZP_01788466.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|145634537|ref|ZP_01790246.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA]
gi|229844374|ref|ZP_04464514.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
gi|144986927|gb|EDJ93479.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|145268082|gb|EDK08077.1| hypothetical protein CGSHiAA_04911 [Haemophilus influenzae PittAA]
gi|229812623|gb|EEP48312.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
Length = 280
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I L D K + I G+ + + + P + + IS
Sbjct: 125 I----LLNESELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|319898015|ref|YP_004136212.1| hypothetical protein HIBPF18630 [Haemophilus influenzae F3031]
gi|317433521|emb|CBY81904.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 280
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQKSEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|145628842|ref|ZP_01784642.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145638619|ref|ZP_01794228.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII]
gi|260582268|ref|ZP_05850061.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
gi|144979312|gb|EDJ88998.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145272214|gb|EDK12122.1| hypothetical protein CGSHiII_07891 [Haemophilus influenzae PittII]
gi|260094636|gb|EEW78531.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
gi|309750118|gb|ADO80102.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 280
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILSSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|145630355|ref|ZP_01786136.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae
R3021]
gi|144984090|gb|EDJ91527.1| hypothetical protein CGSHi22421_07147 [Haemophilus influenzae
R3021]
Length = 280
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAAN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|119897884|ref|YP_933097.1| aminomethyltransferase [Azoarcus sp. BH72]
gi|119670297|emb|CAL94210.1| conserved hypothetical aminomethyltransferase [Azoarcus sp. BH72]
Length = 342
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/301 (20%), Positives = 108/301 (35%), Gaps = 43/301 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L + I+ G + FL + + DV LP A+ S+ +P+G++L L+ E +
Sbjct: 39 VPLLHLGLIRSVGPDSTTFLHNLFSNDVAKLPADGAQWSSFNSPKGRMLASLLLWP-EAE 97
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---VLSWNQEHTFSNSSFIDERF 120
L + +++ KL Y LRS V + V V + +
Sbjct: 98 GHSLVMAADILPAMLKKLSMYVLRSKVKLNDAGETTVLIGVAGGDAAAVLQGAGLPVPAA 157
Query: 121 SI-----ADVLLHRTWGHNEKIASDI--------------------KTYHELRINHGIVD 155
+ A + R +A D + I G+
Sbjct: 158 PMQQVSAAAGRVVRVGEQAFVLAIDSAAASSVFTALVAAGAHKAGTAAWQLAMIRAGVP- 216
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
T DL+ G++ KGCY GQE+V+R Q+ ++KR + D +P
Sbjct: 217 LITAPTQEEFVAQMLNYDLIGGVNFKKGCYPGQEIVARTQYLGTVKKRLYRVALDADSVP 276
Query: 215 PSGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHA-IKKGMALTVHGVRVK 265
GS + + G + V G +ALA+ + V+ ++ G G V+
Sbjct: 277 TPGSDLYAPDFGEQSAGKVVNVAPSPEGGYEALAVLQNTSVEGGQLRYGSP---AGAPVR 333
Query: 266 A 266
Sbjct: 334 V 334
>gi|123443583|ref|YP_001007556.1| putative global regulator [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166979589|sp|A1JPM8|YGFZ_YERE8 RecName: Full=tRNA-modifying protein ygfZ
gi|122090544|emb|CAL13413.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 330
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS D+ + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVIAAQPDAVLLGVAGTQAKAVLAEVFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T S ERF A L+ + + ++ K + L I
Sbjct: 139 NADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKLADRAQF--NNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G+
Sbjct: 197 AGFPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGS 255
Query: 211 DD-LPPSGSPI 220
+ P G +
Sbjct: 256 ANRAPAVGEDL 266
>gi|319775606|ref|YP_004138094.1| hypothetical protein HICON_09480 [Haemophilus influenzae F3047]
gi|329122346|ref|ZP_08250933.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116]
gi|317450197|emb|CBY86413.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327473628|gb|EGF19047.1| folate-binding protein YgfZ [Haemophilus aegyptius ATCC 11116]
Length = 280
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I T GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQESEIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|264677744|ref|YP_003277650.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni CNB-2]
gi|262208256|gb|ACY32354.1| glycine cleavage T protein (aminomethyltransferase) [Comamonas
testosteroni CNB-2]
Length = 318
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 91/253 (35%), Gaps = 20/253 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ ++ D
Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRLSAD 72
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110
+L DRS + +L + LR+ + + + +
Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLAGQAAEQLAGKNAAAWALK 132
Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165
+ + + A G + + + G+ + +
Sbjct: 133 QQGDAHVIALYPAAGNQRALWVGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + +
Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250
Query: 226 EIGTLGVVVGKKA 238
G VV A
Sbjct: 251 LEQATGTVVQAAA 263
>gi|301169187|emb|CBW28784.1| predicted folate-dependent regulatory protein [Haemophilus
influenzae 10810]
Length = 280
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 13/243 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G A +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFIDERFS 121
F L + + S +D L Y + S V +++ GV+ + T S IDE+ S
Sbjct: 65 QFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRS 124
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
I LL+ T D K + I G+ + + + P + + IS
Sbjct: 125 I---LLNET-ELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAIEQAISF 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPI----LTDDIEIGTLGVVVG 235
TKGCYIGQE V+R ++R ++ I GS I + + GT+ V
Sbjct: 180 TKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAKIGSEIEMQLEANWRKTGTITSAVN 239
Query: 236 KKA 238
Sbjct: 240 LDG 242
>gi|254785325|ref|YP_003072754.1| folate-binding protein [Teredinibacter turnerae T7901]
gi|237684991|gb|ACR12255.1| folate-binding protein [Teredinibacter turnerae T7901]
Length = 323
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 105/294 (35%), Gaps = 32/294 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++LS+ I + G FLQ T D A +G++ F+ +KI +
Sbjct: 25 LIHLSDYRLIVITGPDGEKFLQGQTTCDFRRFEKHQWLRGAHCNAKGRMHSTFVAAKIGD 84
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110
L + S +S + L Y + S + V + + H
Sbjct: 85 QQIGLRVHASIAESALKALQKYIVFSKAEARVHTALLVGVLGDAAETTLPFSLPDVGHCD 144
Query: 111 SNSSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+++ F R A L + + + + + ++ GI D + +
Sbjct: 145 TSAGFPVLRLEAAAAELWLLNDTHAGIPDQLPGVWAHPECWQQYLLDKGIADVTAESV-E 203
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDDLPPSGSPI 220
+ P + L++ +S KGCY GQE+V+R+ +R ++K + D G +
Sbjct: 204 ELLPQELNYQLVDAVSFDKGCYTGQEIVARMHYRGKLKKHLYLAETDLSADSTLGFGMDV 263
Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ + +G + + LA+ + D A + L + G + P
Sbjct: 264 VGEKGSVGKVITATRLGQNRWRLLALVQ----DDATQNSAHLALAGQPILTWKP 313
>gi|332528358|ref|ZP_08404358.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella
gracilis ATCC 19624]
gi|332042229|gb|EGI78555.1| glycine cleavage T protein (aminomethyltransferase) [Hylemonella
gracilis ATCC 19624]
Length = 317
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 108/306 (35%), Gaps = 48/306 (15%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++ G+ A FLQ+ +T D L AR +A + QG++ F+ K+ D
Sbjct: 10 PLPHLGVLRASGEEATKFLQSQLTNDFALLGANQARFAAFCSAQGRMQASFIGVKLAADD 69
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----PINGVVLSWNQEHTFSNSSFI---- 116
+L + + + +L + LR+ V + + G+ Q HT +
Sbjct: 70 ILLVCSQDLLERTLKRLSMFVLRAKVKLSDATASFALYGLAGDAVQAHTPGAGALPAPWT 129
Query: 117 -------------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
D+R + A L T E A + + + G+
Sbjct: 130 CQSVNDETRLIHLHPAVKGDDRAARALWLAPATTPAPEATALAHEDWLWGEVLSGVA-MV 188
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--------- 208
+ P + + GI+ KGCY GQEVV+R Q R I++R + +
Sbjct: 189 SAPTFEAFVPQMLNYESIEGINFKKGCYPGQEVVARSQFRGAIKRRALRVRSPVALSAGQ 248
Query: 209 --GTDDLPPSGSPILTDDIEI--GTLGVVVGK-KALAIARIDKVDHAIKKGMALTVHGVR 263
P ++ + G G G A+ + ++ ++ T G
Sbjct: 249 DIFDAAAPEEACGVVAQAAKAPQGQRGSPEGGFDAIVVLQLAHAQAQLQ-----TADGAA 303
Query: 264 VKASFP 269
+ S P
Sbjct: 304 LT-SLP 308
>gi|254362022|ref|ZP_04978151.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica PHL213]
gi|261491670|ref|ZP_05988252.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494211|ref|ZP_05990711.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093573|gb|EDN74547.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica PHL213]
gi|261310114|gb|EEY11317.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312685|gb|EEY13806.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 296
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 7/223 (3%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS I++ G A +LQ +T DV + ++ P+GK+ + + E
Sbjct: 16 CVPLSQYCLIEIAGVDAEKYLQGQLTCDVAKISVGEHTLTSHCDPKGKMSALLRLYRAEN 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ F+ I RS + +L Y + S V ++ + + R +
Sbjct: 76 EKFMAIIHRSLLPEALTQLKKYAVFSKVTFTELDTPLYGMAGEAAFAKLSENMTALRLTT 135
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLT 181
WG + +D + + + I GI + P + L IS T
Sbjct: 136 GQPRAI-VWGEELETTADEQLWTLMDIQDGIPVLLQQ-NQFELIPQATNLQALESAISFT 193
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITG----TDDLPPSGSPI 220
KGCYIGQE V+R ++R ++ + G LP S I
Sbjct: 194 KGCYIGQETVARAKYRGANKRALFTLAGNFESEISLPEVASAI 236
>gi|254467880|ref|ZP_05081286.1| glycine cleavage T protein [beta proteobacterium KB13]
gi|207086690|gb|EDZ63973.1| glycine cleavage T protein [beta proteobacterium KB13]
Length = 278
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 16/237 (6%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64
L + S I++ G+ + FLQ +T DV K S + P+G++ + I ++ + ++
Sbjct: 6 LDHYSIIEISGEDHLDFLQGQLTNDVKK-NEKKFIYSGMCNPKGRLFAFLRILRVPDLNS 64
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIE----------IQPINGVVLSWNQEHTFSNSS 114
L S D++ +L + LRS V+I+ I + + +Q+ + +
Sbjct: 65 TFLVTPSSLADAIQKRLTMFVLRSKVVIQKAENFHLLGIIDDSPKIYIPTDQQLNLPDQT 124
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
L ++ NE DI + + I GI + + H +DL
Sbjct: 125 NRSVIILNDSNLFNQI--KNEHSFEDISMWIKKDIEFGIPE-VMEKTQEKFLAHTCNLDL 181
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTL 230
++ ++ KGCY GQE+V+R + + R L G +L +D IGT+
Sbjct: 182 IDAVNFKKGCYTGQEIVARTHYLGKPKHRSFYGVINSKLSFDYGEQVLENDRSIGTV 238
>gi|238787327|ref|ZP_04631126.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641]
gi|238724589|gb|EEQ16230.1| tRNA-modifying protein ygfZ [Yersinia frederiksenii ATCC 33641]
Length = 327
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLMSLDDWALVTLTGADRVKYLQGQVTADIDALPTDQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108
E +E RS D+ + +L Y + S V+I QP GV Q
Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVISAQPDAVLLGVAGDQAQAALTPIFAELP 138
Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T + S ERF A ++ + + ++ K + L I
Sbjct: 139 NAEHPVIQQGNSTLLHFSLPTERFLIVTDSEQAQQIVEKLADSAQ--LNNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDAD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGN 255
Query: 211 DD-LPPSGSPI 220
+ +P +G +
Sbjct: 256 ANRVPAAGEDL 266
>gi|307244858|ref|ZP_07526957.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253812|ref|ZP_07535666.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258268|ref|ZP_07540011.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854303|gb|EFM86509.1| hypothetical protein appser1_720 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863296|gb|EFM95236.1| hypothetical protein appser9_720 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867728|gb|EFM99573.1| hypothetical protein appser11_730 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 279
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 22/275 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I++ G A +LQ +T DV L + P+GKI + + D F
Sbjct: 3 LSQYRLIEIAGVDAEKYLQGQLTCDVAKLAEGEHTLTCHCDPKGKISALIRLYRQAADKF 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSN-SSFIDERFSI 122
I I +++L Y + S V PI GV N ++ + +
Sbjct: 63 IAMIHADLLPEALNQLKKYAVFSKVTFTELDTPIYGVTSGEILAKLCENTTALVIPQGQK 122
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLT 181
+ WG + +D + + + I GI + P + + N IS +
Sbjct: 123 RAI----VWGETLETNADSQLWDLIDIQDGIP-MLLKANQFELIPQATNLQAVENAISFS 177
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKK 237
KGCYIGQE V+R ++R ++ + G D LP G + ++++G G
Sbjct: 178 KGCYIGQETVARAKYRGANKRAMFTLVGKFDGEVSLPEVGGSV---EMQLGENWRATGTI 234
Query: 238 ALAIARIDKV------DHAIKKGMALTVHGVRVKA 266
++A +K+ ++ ++ A ++GV +
Sbjct: 235 LNSVAYQNKLWLQVVMNNDVEADSAFRINGVPLAI 269
>gi|71907821|ref|YP_285408.1| glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
gi|71847442|gb|AAZ46938.1| Glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
Length = 339
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L++ I+ G+ A FL + T+D+ LP +A+ + T +G++ FL+ + +E
Sbjct: 43 VPLTHLGLIEATGEDAKAFLHSQFTSDINHLPENLAQHAGWCTAKGRMQASFLVWRHDE- 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------TF 110
++L + +++ +LL + LRS V + + ++L T
Sbjct: 102 RYLLALSADLQEATQKRLLMFVLRSKVKLAALTDSTIMLGLAGPQAEEALADAALPCPTD 161
Query: 111 SNSSFIDERFSIADVLLHR-TWGHNEKIASDIKT-------------YHELRINHGIVDP 156
+ ++ I + ++ + +R +E + + + L +
Sbjct: 162 AMATVISDGVTVIRLDQNRFIISASESAMAPLWQKLTIKARPAGLPVWRWLDVQAAFP-L 220
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
T P A + + G+S KGCY GQEVV+R Q+ +++ +T L +
Sbjct: 221 VTLATKEEFVPQMADFEKIGGVSFHKGCYPGQEVVARTQYLGKVKRHLYRLTSQQPL-KA 279
Query: 217 GSPILTDDIEIGTLGVVV--------GKKALAIA 242
G + + D + G V+ G +ALA+
Sbjct: 280 GDALHSPDNPDQSCGTVMTVAPSPAGGFEALAVV 313
>gi|51597485|ref|YP_071676.1| global regulator [Yersinia pseudotuberculosis IP 32953]
gi|153946923|ref|YP_001399856.1| global regulator [Yersinia pseudotuberculosis IP 31758]
gi|81638623|sp|Q666S2|YGFZ_YERPS RecName: Full=tRNA-modifying protein ygfZ
gi|166979590|sp|A7FF28|YGFZ_YERP3 RecName: Full=tRNA-modifying protein ygfZ
gi|51590767|emb|CAH22412.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|152958418|gb|ABS45879.1| putative aminomethyltransferase [Yersinia pseudotuberculosis IP
31758]
Length = 330
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEH--------- 108
E +E RS D+ + +L Y + S V+I QP GV S +
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAPQPDAVLIGVAGSQAKTALAEIFTELP 138
Query: 109 ------------TFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T + S ERF A L+ + G + +D K + L I
Sbjct: 139 SAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQF--NDSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + LNGIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDA-ANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGN 255
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 256 ASRVPAAGEDL 266
>gi|256821968|ref|YP_003145931.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069]
gi|256795507|gb|ACV26163.1| folate-binding protein YgfZ [Kangiella koreensis DSM 16069]
Length = 312
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 112/283 (39%), Gaps = 30/283 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L + I+V G A FLQ +T D+ + + A QG++ F K +
Sbjct: 27 ACELGHYGIIRVHGGDAHKFLQGQLTCDLDKVTDQQASLGGFCNVQGRLHGIFFTIKYGD 86
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FID 117
D ++L + + + L++KL Y + V + ++ + Q+ +N + +
Sbjct: 87 D-YLLLVPKEGLEHLLNKLKMYAVFFKVELTDASLDFQIWGHTQKGATTNFAEDMSLVVT 145
Query: 118 ERFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDF 160
+ ++ L+ + + IA +D+ + + I I +
Sbjct: 146 RDKGVTEIHLNSLFNASFMIAEKEDGSAIIKALEGTTLADVNAWDYIEIQAHIP-LVFEE 204
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSP 219
+ PH + + G+S KGCY GQE+V+R+ +R ++ ++ D G
Sbjct: 205 TLEELLPHFIGLPQVGGVSFDKGCYTGQEIVARMHYRGKLKTHALLAYSKDTTTLTPGDK 264
Query: 220 I-LTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTV 259
+ +D +G + V K A+ + D A++ + +
Sbjct: 265 VHNENDKAVGDVIRSTVFDGKTYALISL--ADKAMESELTINA 305
>gi|294142438|ref|YP_003558416.1| glycine cleavage system T protein [Shewanella violacea DSS12]
gi|293328907|dbj|BAJ03638.1| glycine cleavage system T protein, putative [Shewanella violacea
DSS12]
Length = 326
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/305 (22%), Positives = 116/305 (38%), Gaps = 48/305 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + V G+ F+ +T D+ +L R A P+GK+L F + EDT
Sbjct: 24 LSHLGLMSVTGEQGRSFIHGQVTTDISSLQSDQWRWGAHCDPKGKMLASFRTFSL-EDTL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121
+ + + +L Y + S + N ++L E ++IDERF
Sbjct: 83 FMMMPADILALDLPQLAKYAVFSKADLVDVTDNFLLLGVAGEQA---KTWIDERFGSDNN 139
Query: 122 ---------IADVLLHR----------------TWGHNEKIASDIKTYHELRINHGIVDP 156
I+ LL + + D + L I G +
Sbjct: 140 TSIDKEVTVISGGLLLKDNDRFIIMMEETAAALLLTSISQEIVDATAWQALEIQSGYPNL 199
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213
S P + +NGIS KGCY+GQE ++R+++R ++ I++GT
Sbjct: 200 AASH-QSQFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGTSSETVS 258
Query: 214 PPSGSPILTDD--IEIGTLGVVV--GKKAL--AIAR-----IDKVDHAIKKGMALTVHGV 262
+ + DD GT+ VV G++ L A+ DK+ A + +LT+ +
Sbjct: 259 LETRLELALDDGFKRTGTIIEVVQSGEQVLLTAVLPNDTQTSDKLRIAGDESSSLTIKPL 318
Query: 263 RVKAS 267
Sbjct: 319 PYSLE 323
>gi|160898827|ref|YP_001564409.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
gi|160364411|gb|ABX36024.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
Length = 315
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 29/281 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I+ G+ A FL +T D L + AR +A T +G++L F+ K +D
Sbjct: 10 ASVSHLGVIRALGEDAAQFLHGQLTNDFALLDLQHARLAAFCTAKGRMLASFIGFKRSKD 69
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L DRS + +L + LR+ + + ++
Sbjct: 70 EILLLCDRSLLAPTLKRLSMFVLRAKCKLSDATAEFTLHGLAGGAAAQALGPAAVPWTKT 129
Query: 124 D------VLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTDFLPST 164
D + L+ G E A + + GI + +
Sbjct: 130 DDGDASLIALYPAAGQPRALRVAPVGTPLPEGPALSEADWLWSEVASGIATLSAPVV-DA 188
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + + G++ KGCY GQEVV+R Q R +++R + L +G + T +
Sbjct: 189 FVPQMLNYESVEGVNFKKGCYPGQEVVARSQFRGTLKRRAYLAHAQQPL-ATGMEVFTPE 247
Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMAL 257
G VV G A+ + D + AL
Sbjct: 248 DLEQATGTVVQAAPAPGGGWDAIVSIQTSSADQPLLAHAAL 288
>gi|187928513|ref|YP_001899000.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
gi|187725403|gb|ACD26568.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
Length = 346
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/307 (19%), Positives = 107/307 (34%), Gaps = 53/307 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDE----- 118
L+ D+ +L +L + LR+ + GV E + + E
Sbjct: 93 LQTDKLIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVN 152
Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
R A W + + D + L
Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLS 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++LL G+ KGCY GQE+V+R Q+R +++R
Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEIVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + + G+VV G L ++D +D A G
Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPM 330
Query: 257 LTVHGVR 263
LT+ +
Sbjct: 331 LTLQELP 337
>gi|146294227|ref|YP_001184651.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
gi|145565917|gb|ABP76852.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
Length = 318
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
F+L + + + + +L Y + S + +L E
Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139
Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
N + + + VL T + D + L I G +
Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQALEIAAGYPNLAASHAHQ 199
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|238796535|ref|ZP_04640042.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969]
gi|238719513|gb|EEQ11322.1| tRNA-modifying protein ygfZ [Yersinia mollaretii ATCC 43969]
Length = 330
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 34/246 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLEDWALVTLTGADRVKYLQGQVTADIDALPADQHILCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS D+ + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRSLLDNQLSELKKYAVFSKVVIAAQPETVLLGVAGAQARVALAGLFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T + S ERF A L+ + H + ++ K + L I
Sbjct: 139 SAEHPVVQQGNSTLLHFSLPAERFLLVTDAEQAQQLVDKLADHAQ--LNNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + D + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDAD-TSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGH 255
Query: 211 DDLPPS 216
PS
Sbjct: 256 ASRVPS 261
>gi|52424309|ref|YP_087446.1| hypothetical protein MS0254 [Mannheimia succiniciproducens MBEL55E]
gi|52306361|gb|AAU36861.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 277
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 7/221 (3%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
++L+ I++ G + FLQ +T DV L + +A P+GK+ F + ++
Sbjct: 3 KLIHLTQYKLIELTGVDSEKFLQGQLTCDVTKLKTGDSTLTAHCDPKGKVSSVFRLIRVA 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
++ F L + +D+L Y + S V + + FS S ++
Sbjct: 63 QEQFYLLFRTDLLPAGLDQLKKYAVFSKVAFAEPEVQLAGVIGENCGQFSASFVVNS--G 120
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISL 180
A +L++ + + + + + I G + + P + + +S
Sbjct: 121 NAAILIN--PAERLEFNASAEAWDCVEIQRGYPILSAK-TQNEFIPQALNLQCIEQAVSF 177
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220
KGCYIGQE V+R ++R ++ I +P G I
Sbjct: 178 QKGCYIGQETVARAKYRGTNKRAMFIFKARSQIIPEIGGEI 218
>gi|332160499|ref|YP_004297076.1| putative global regulator [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607033|emb|CBY28531.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664729|gb|ADZ41373.1| putative global regulator [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863456|emb|CBX73575.1| tRNA-modifying protein ygfZ [Yersinia enterocolitica W22703]
Length = 330
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TAD+ LP A +GK+ +
Sbjct: 20 LTLISLDDWVLVTLTGADRVKYLQGQVTADIDALPADQHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS D+ + +L Y + S V+I QP ++
Sbjct: 80 GEGLAFIE-RRSVLDNQLSELKKYAVFSKVVIAAQPDAVLLGVAGAQAKAALAEVFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T S ERF A L+ + + ++ K + L I
Sbjct: 139 NADHPVVQQGDSTLLYFSLPAERFLLVTDTEQAQQLVEKL--TDRAQFNNSKQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G +TD + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGFPIIDTD-SSAQFIPQATNIQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGH 255
Query: 211 DD-LPPSGSPI 220
+ +P +G +
Sbjct: 256 ANRVPAAGEDL 266
>gi|170718457|ref|YP_001783673.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus
somnus 2336]
gi|168826586|gb|ACA31957.1| glycine cleavage T protein (aminomethyl transferase) [Haemophilus
somnus 2336]
Length = 277
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 89/251 (35%), Gaps = 13/251 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L I V G A FLQ +T DV L + +A P+GK+ F + + E
Sbjct: 2 LINLKQYGLIYVEGVDAEKFLQGQLTCDVTKLAIGQSTLTAHCDPKGKVNSLFRLIRHAE 61
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
F L I + + + +L Y + S V + V + + I + I
Sbjct: 62 QQFYLLIRQDLLNHGLAQLKKYAVFSQVTFSEKNWTIVGM---LDQDLKECGAISPQIRI 118
Query: 123 -ADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
W + D + + L + G P + + I
Sbjct: 119 DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTI-IGQGEFIPQALNLQEIEQAI 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVV 233
S KGCYIGQE ++R ++R I ++ ++ T L G+ I + G +
Sbjct: 178 SFQKGCYIGQETIARAKYRGINKRAMYLLQAKTAALVEIGTEIEMQLEHAWRKTGCILSA 237
Query: 234 VGKKALAIARI 244
V + ++
Sbjct: 238 VNLNGILYLQV 248
>gi|197334522|ref|YP_002156896.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11]
gi|226730811|sp|B5FAI0|YGFZ_VIBFM RecName: Full=tRNA-modifying protein ygfZ
gi|197316012|gb|ACH65459.1| tRNA-modifying protein YgfZ [Vibrio fischeri MJ11]
Length = 318
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 26/245 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +T DV++L +GK+ F + D +
Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFHHN-DGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSFIDER 119
L +S ++ + ++ Y + S V I I L W +HT SN++ +
Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDDILLGFTGDKALEWINQHTDSNANVRVSK 143
Query: 120 F------SIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165
F S LL T E++ S D + I H + + D L +
Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQLD-DQLCNEH 202
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ +++G + P +G I +
Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGISEAQPSAGDAI---E 259
Query: 225 IEIGT 229
+G
Sbjct: 260 RSVGE 264
>gi|117921854|ref|YP_871046.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
gi|117614186|gb|ABK49640.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
Length = 318
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 30/276 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK++ F I+E
Sbjct: 21 LANLSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCDPKGKMIASFRTFAIQE 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------- 108
++ + R + + +L Y + S + +L E
Sbjct: 81 -ALLMLLPRETIEVDLPQLQKYAVFSKATLTNATAEWTLLGVAGEQATQFVTQHFGEITE 139
Query: 109 --TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
T I +RF + T E D + L I G + +
Sbjct: 140 ELTLVEHGAILKDADRFILVLQPEAATTLVGEHTVFDASAWQALEITAGYPNLAPSHA-N 198
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPI 220
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT S I
Sbjct: 199 QYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSSDINLESALEI 258
Query: 221 LTDD--IEIGTL--GVVVGKKAL--AIARIDKVDHA 250
+D + G + V G + L A+ D + A
Sbjct: 259 ELEDGYRKGGQIIEFVQRGNQVLLTAVLANDTANDA 294
>gi|309782013|ref|ZP_07676743.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
gi|308919079|gb|EFP64746.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
Length = 346
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 61/307 (19%), Positives = 107/307 (34%), Gaps = 53/307 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNSSFIDE----- 118
L+ D+ +L +L + LR+ + GV E + + E
Sbjct: 93 LQTDKLIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPDAAEALREAGAVLPEPDTVN 152
Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
R A W + + D + L
Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRQRYQWMVHAEHFQDAWKTLSSRLSLVGTEVWDWLS 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++LL G+ KGCY GQE+V+R Q+R +++R
Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEIVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + + G+VV G L ++D +D A G
Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPM 330
Query: 257 LTVHGVR 263
LT+ +
Sbjct: 331 LTLQELP 337
>gi|91794306|ref|YP_563957.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
gi|91716308|gb|ABE56234.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
Length = 318
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+++ LS+ I++ G+ A F+ +T D++++ + R A P+GK++ F I +
Sbjct: 17 INAARLSHFGMIEITGEQAKTFINGQVTTDIISMTDEEWRWGAHCDPKGKMIASFRIFLL 76
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------ 108
E ++ + +S + +L Y + S + + +L E
Sbjct: 77 GE-RLLMLMPKSTLALDLAQLKKYAVFSKAELTDVSDSWAILGLWGEKSVDLMTQHFGEL 135
Query: 109 -----TFSNSSFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHGIVDPNTD 159
+ + + F +L + K + L I G + ++
Sbjct: 136 TQGLTATEQGAILKDNFGFMAILPQEQANIFIEQAKLELVAHKAWQALEIAAGYPNIDSQ 195
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPS 216
P + +NGIS TKGCY+GQE ++R+++R ++ I+ GT S
Sbjct: 196 H-SGQYVPQMCNLQAVNGISFTKGCYMGQETIARMKYRGGNKRALYILEGTTQRTLSTES 254
Query: 217 GSPILTDD--IEIGTLGVVV 234
I + ++G + VV
Sbjct: 255 QVEIQLEGGYRKVGNVIEVV 274
>gi|113461437|ref|YP_719506.1| aminomethyl transferase [Haemophilus somnus 129PT]
gi|112823480|gb|ABI25569.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 277
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 88/251 (35%), Gaps = 13/251 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L I V G A FLQ +T DV L + +A P+GK+ F + + E
Sbjct: 2 LINLKQYGLIYVEGVDAEKFLQGQLTCDVTKLAIGQSTLTAHCDPKGKVNSLFRLIRHAE 61
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
F L I + + + +L Y S V + V + + I + I
Sbjct: 62 QQFYLLIRQDLLNHGLAQLKKYAFFSQVTFSEKNWTIVGM---LDQDLKECGAISPQIRI 118
Query: 123 -ADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
W + D + + L + G P + + I
Sbjct: 119 DLGNRQILCWEQKMSLEYTQDTQYWDYLDMQQGFPILTI-IGQGEFIPQALNLQEIEQAI 177
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGVV 233
S KGCYIGQE ++R ++R I ++ ++ T L G+ I + G +
Sbjct: 178 SFQKGCYIGQETIARAKYRGINKRAMYLLQAKTAALVEIGTEIEMQLEHAWRKTGCILSA 237
Query: 234 VGKKALAIARI 244
V + ++
Sbjct: 238 VNLNGILYLQV 248
>gi|127514126|ref|YP_001095323.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
gi|126639421|gb|ABO25064.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
Length = 322
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 108/293 (36%), Gaps = 31/293 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ A F+ +T D+ +L R A P+GK+L F + D
Sbjct: 24 LSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCDPKGKMLASFRTFAHQ-DAL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERF 120
++ + R + +L Y + S + + + + E + + E
Sbjct: 83 LMMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFGVSGEQALAWIAQAFGEIAAELT 142
Query: 121 SIADVLLHR----------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
I ++ R ++ D + + I G+ + S
Sbjct: 143 EIPGGVILRDGERYIIAVKCDTQAELLAKIDQPIYDFSAWQAIEIAAGLPNLYARH-QSQ 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS---PIL 221
P + ++GIS TKGCY+GQE V+R+++R ++ I+ G+ + +
Sbjct: 202 FVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRALYIVQGSASVTIDDDSQLEMK 261
Query: 222 TDDIE----IGTLGVVVGKKA-LAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+D E GT+ V + L ++ + D + + + V P
Sbjct: 262 LEDDEGYRRAGTILEAVQRDGQLLLSAVLPNDTPLTAQLRVAGDEASVLTLAP 314
>gi|219871845|ref|YP_002476220.1| putative GCV family glycine cleavage complex aminomethyltransferase
[Haemophilus parasuis SH0165]
gi|219692049|gb|ACL33272.1| possible GCV family glycine cleavage complex aminomethyltransferase
[Haemophilus parasuis SH0165]
Length = 296
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 33/285 (11%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V L+ I+V G A +LQ +T DV L + P+GK+ F + +
Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVAKLAVGEQSLTCHCDPKGKMSALFRLYRATA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------GVVLSWNQEHTFSNSSF 115
+ F L I + + +L Y + S V ++ +N+ T + +
Sbjct: 76 EQFFLIIQQDLLPEALVQLKKYAVFSKVTFTELDQALFGTTSGEIIAKFNENVT---ACY 132
Query: 116 IDERFSIADVLLHRTWGHN-EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+DE A WG + D + ++ + I G+ + P + L
Sbjct: 133 LDEEPKRAIF-----WGDIVVETNGDSRLWNLIDIQQGVPLLYK-ANQFELIPQATNLQL 186
Query: 175 L-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMI----ITGTDDLPPSGSPILTDDIEIGT 229
L IS TKGCYIGQE V+R ++R ++ + G +LP S I ++++G
Sbjct: 187 LDKAISFTKGCYIGQETVARAKYRGANKRAMFTFVGNVEGEIELPAIASSI---EMQLGE 243
Query: 230 LGVVVGKKALAIARIDK-------VDHAIKKGMALTVHGVRVKAS 267
G LA+ R + ++ ++ V V +
Sbjct: 244 NWKSTGTI-LAVQRYQQQLWLQVVLNKELEPEANFRVGNVSLALF 287
>gi|254481212|ref|ZP_05094457.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148]
gi|214038375|gb|EEB79037.1| folate-binding protein YgfZ [marine gamma proteobacterium HTCC2148]
Length = 298
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 114/288 (39%), Gaps = 34/288 (11%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G + FLQ +T D + + A A PQG+++ F+++++ E+ + L +
Sbjct: 1 MHIIGPDTLSFLQGQVTCDTREVSSQQAVVGAYCNPQGRMVCDFMLAQLGENHYALRLKA 60
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHT--FSNSSFIDERFSIADV--- 125
+ + Y + S +E + + V+ W E +N+ F
Sbjct: 61 NTLATAAKTFSKYIVFSKADLEAERQDWQVIGCWGNEAAKDLANAGFAIPEAKYQAATGD 120
Query: 126 ---------------LLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLP 162
LL T H+E++ S + L+I GI +
Sbjct: 121 GYVVVQMDDAGTQFELLIDTQNHSERLNSLGQNLNSGKESQWQALQIRAGIGRIEQANI- 179
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI- 220
+ P D+ +S TKGCY GQE+V+R+ +R ++R + + + P +G+ +
Sbjct: 180 EELLPQMLNYDVTGHVSFTKGCYTGQEIVARLHYRGKAKRRLYLGQFDETESPGAGAALF 239
Query: 221 -LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKA 266
+ + +G L I + + +++G+ LT G ++
Sbjct: 240 STSAEQSVGVLVNAASADGGNICLLCATEKGVEQGLRLTSQQGAAIQV 287
>gi|290476407|ref|YP_003469312.1| hypothetical protein XBJ1_3430 [Xenorhabdus bovienii SS-2004]
gi|289175745|emb|CBJ82548.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 332
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 35/252 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L++ I V G A +LQ +T+D+ +L K SA +GK+ +
Sbjct: 20 LALISLNDWGMISVTGADAEKYLQGQVTSDIASLNQKH-VLSAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQP 96
E +E R+ DS + +L Y + S V P
Sbjct: 79 GEGFAYIE-RRTVLDSQLTELKKYAVFSKVTFAKDEESILLGVAGAGSRNALAEMFPTLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ ++ T + +F ERF + A L G + +D + + L I
Sbjct: 138 DAETTVIQHETTTLLHFAFPAERFLLVTDQATAAQLTETLVGKLQAQLNDSQQWLALEIE 197
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G ++ + P + +L G IS KGCY GQE+V+R ++R ++ + G
Sbjct: 198 AGFPVIDS-ASSAQFIPQATNIQVLEGSISFKKGCYTGQEMVARAKYRGANKRAMYWLAG 256
Query: 210 T-DDLPPSGSPI 220
T LP +G +
Sbjct: 257 TASSLPVAGDDL 268
>gi|170728217|ref|YP_001762243.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908]
gi|169813564|gb|ACA88148.1| folate-binding protein YgfZ [Shewanella woodyi ATCC 51908]
Length = 320
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 58/299 (19%), Positives = 110/299 (36%), Gaps = 37/299 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ + V G+ F+ +T D+ +L R A P+GK+L F + +
Sbjct: 21 ANLSHMGLMSVTGEQGRSFIHGQVTTDISSLESNQWRWGAHCDPKGKMLASFRTFSVADA 80
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------- 109
F++ + + + + +L Y + S + + +L E
Sbjct: 81 LFMM-MPKDTLAADLPQLAKYAVFSKADLVDVSADWTILGVAGEQAQEWVNNYFGEITQE 139
Query: 110 ---FSNSSFI--DERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
+ ERF I + + + L I G+ +
Sbjct: 140 LTEIPGGVLLKDGERFIIIIENAPSEPLLSSINTPIQESSAWQALEIQAGLPNLGVSH-Q 198
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSP 219
P + +NGIS KGCY+GQE ++R+++R ++ I++GT S
Sbjct: 199 GQFVPQMCNVQAINGISFKKGCYMGQETIARMKYRGGNKRALYILSGTSSQTLALDSRLE 258
Query: 220 ILTDD--IEIGTL--GVVVGKKAL--AIARID-----KVDHAIKKGMALTVHGVRVKAS 267
+ +D ++GT+ V G + L A+ D K+ A + +LT+ +
Sbjct: 259 LAIEDGFKKVGTIIELVQSGDQVLLSAVLPNDTENSAKLRVADDETSSLTIQPLPYSLE 317
>gi|119943855|ref|YP_941535.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
gi|119862459|gb|ABM01936.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
Length = 325
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 36/266 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L++ + V G+ I FLQ +T D+ L +A PQGK+ F + +
Sbjct: 18 LCPLTSWDLLSVTGEDRITFLQGQLTCDLTILKPGEQTLAAQCNPQGKVWSIFRVVVLN- 76
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTF 110
D +L +S + +L Y S V I+ + + ++N T
Sbjct: 77 DRILLIQPKSVTAKQLPELQKYATFSKVEIKKETEYQLLGLAGCKSAANIAKNFNISATH 136
Query: 111 SNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGI 153
S +D + + L+ ++ D+K ++ + I GI
Sbjct: 137 EESHLLDDDQGVIIKQPYPSLRYLMIVKNQQATQLTEDLKDQASVYDDSLWNAMNIAAGI 196
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDD 212
+ P + LNGIS TKGCYIGQE ++R ++R ++ I+TG +
Sbjct: 197 AFIEEE-TSGLFIPQMLNLQALNGISFTKGCYIGQETIARTKYRGANKRALFILTGRATE 255
Query: 213 LPPSGSPI----LTDDIEIGTLGVVV 234
P +G + + +GT+
Sbjct: 256 APKAGQNVKVLLNNNWKRVGTIISGC 281
>gi|241663067|ref|YP_002981427.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
gi|240865094|gb|ACS62755.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
Length = 346
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 58/307 (18%), Positives = 106/307 (34%), Gaps = 53/307 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLATLLVWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDE---- 118
L+ D++ +L +L + LR+ + + E + + +
Sbjct: 93 LQTDKAIAPALTKRLSMFVLRAKAKLRPMDEFIAIGVAGPEAADALREAGAVLPEPDTVN 152
Query: 119 -----------------RFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
R A W + + + L
Sbjct: 153 AVAQQPATVGQQFGAVVRLPDAGGRPRYQWMVHAEHFQHAWKTLSSRLSLVGTEVWDWLS 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++LL G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPHITLP-TQEQFVPQMVNLELLGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + + G+VV G L ++D +D A G
Sbjct: 272 VNAPT-SAGAEVYSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATPDGPV 330
Query: 257 LTVHGVR 263
LT+ +
Sbjct: 331 LTLQELP 337
>gi|167855722|ref|ZP_02478478.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755]
gi|167853178|gb|EDS24436.1| hypothetical protein HPS_08662 [Haemophilus parasuis 29755]
Length = 296
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 103/278 (37%), Gaps = 19/278 (6%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V L+ I+V G A +LQ +T DV L + P+GK+ F + +
Sbjct: 16 CVALTQYRLIEVAGIDAEKYLQGQLTCDVAKLAVGEQSLTCHCDPKGKMSALFRLYRATA 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ F L I ++ + +L Y + S V + + + E + + +
Sbjct: 76 EQFFLIIQQNLLPEALVQLKKYAVFSKVTFTELD-QALFGTTSGEIIAKFNENVTACYLD 134
Query: 123 ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISL 180
+ WG + D + + I G+ + P + L IS
Sbjct: 135 EEPKRTIFWGDIAVEANGDGSLWDLIDIQQGVPLLYK-ANQFELIPQATNLQQLDKAISF 193
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMI----ITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
TKGCYIGQE V+R ++R ++ + G +LP S I ++++G G
Sbjct: 194 TKGCYIGQETVARAKYRGANKRAMFTFVGNVEGEIELPAVASSI---EMQLGENWKNTGT 250
Query: 237 KALAIARIDK-------VDHAIKKGMALTVHGVRVKAS 267
LA+ R + ++ + V VR+
Sbjct: 251 I-LAVQRYQQQLWLQVVLNKELDPEANFRVGNVRLALF 287
>gi|120597634|ref|YP_962208.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
gi|120557727|gb|ABM23654.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
Length = 318
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 21/230 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ IKV G+ F+ +T D+ +L R A P+GK+L F I+E
Sbjct: 21 LANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCDPKGKMLASFRTFAIQE 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
F+L + + + + +L Y + S + +L E
Sbjct: 81 ALFML-MPKGAIEVDLPQLQKYAVFSKATLSNASGEWTLLGVAGEQACQFVKQHFGDIQQ 139
Query: 110 ----FSNSSFIDERFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPS 163
N + + + VL T + D + L I G +
Sbjct: 140 ELTLIENGAILKDADRFILVLQPETANTLVAKHTVFDATAWQVLEIAAGYPNLAASHAHQ 199
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
P + +NGIS KGCY+GQE V+R+++R ++ I+ GT L
Sbjct: 200 -YVPQMCNLQAVNGISFNKGCYMGQETVARMKYRGGNKRALYILHGTTSL 248
>gi|68171279|ref|ZP_00544680.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia
chaffeensis str. Sapulpa]
gi|88657580|ref|YP_506966.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str.
Arkansas]
gi|67999294|gb|EAM85942.1| Glycine cleavage T protein (aminomethyl transferase) [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599037|gb|ABD44506.1| aminomethyl transferase family protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 278
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 22/280 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L ++S I G+ L T +VL L A S +L+P G+ + F I + +
Sbjct: 5 IILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGK- 63
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------- 114
+L+ ++++ +I K L YKL+ ++I+ + V + ++ +
Sbjct: 64 YVLLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTI 123
Query: 115 -FIDERFSIADVLL-----HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
F D R S + + + + + E + Y LRIN+ + D D + T FP
Sbjct: 124 FFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTSFPL 183
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
M + I KGCYIGQE V+R+ +R ++K I + ++ EIG
Sbjct: 184 QFRMAQFHAIDFNKGCYIGQETVARM-YRAGVKKNIYTIISEHQSF-CDTKVMCAQQEIG 241
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
L VG L + I L + G +VK
Sbjct: 242 RLLSNVGNIGLCLLDISSEHDF----CNLKIGGAKVKILL 277
>gi|238752998|ref|ZP_04614457.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380]
gi|238708786|gb|EEQ01045.1| tRNA-modifying protein ygfZ [Yersinia rohdei ATCC 43380]
Length = 327
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 34/249 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP+ A +GK+ +
Sbjct: 20 LTLISLDDWALVTLTGADRVKYLQGQVTADIDALPHDRHVLCAHCDAKGKMWSNLRLFYR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS ++ +++L Y + S V I QP ++
Sbjct: 80 GEGLAFIE-RRSVLNNQLNELKKYAVFSKVAIAAQPEAVLLGIAGAEAKTALAQIFAELP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T + S ERF +A L+ + G + ++ + + L I
Sbjct: 139 NAEHPVIQQGDSTLLHFSQPAERFLLVTDAELAQQLVEKLAGSAQ--LNNSQQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + D + P + L+GIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGLPIIDADI-SAQFIPQATNIQALDGISFSKGCYTGQEMVARAKYRGANKRALYWLAGN 255
Query: 211 DDLPPSGSP 219
P
Sbjct: 256 ASRVPVAGE 264
>gi|68249068|ref|YP_248180.1| aminomethyltransferase related to GcvT [Haemophilus influenzae
86-028NP]
gi|68057267|gb|AAX87520.1| predicted aminomethyltransferase related to GcvT [Haemophilus
influenzae 86-028NP]
Length = 280
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 19/247 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ I+V G +LQ +T+DV+ L +A P+GK+ + + K+ +
Sbjct: 5 ISLTQYQLIEVQGADVEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSE 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L + + S +D L Y + S V +++ + + + I FS+
Sbjct: 65 QVFLLVKKDILPSALDALKKYAVFSKVSFDLRDWQIIGVIGEK------CGKITPHFSL- 117
Query: 124 DVLLHRTWGHNEK-----IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NG 177
++ R+ NE D K + I G+ + + + P + +
Sbjct: 118 EIDGQRSILLNETELPVNFNGDEKIWEVADIQAGLPNLSPQ-TQNEFIPQALNLQAVEQA 176
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPI----LTDDIEIGTLGV 232
IS TKGCYIGQE V+R ++R ++ I T GS I + + GT+
Sbjct: 177 ISFTKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEVEIGSEIEMQLEANWRKTGTITS 236
Query: 233 VVGKKAL 239
V +
Sbjct: 237 AVNLDGI 243
>gi|83748620|ref|ZP_00945639.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|207723529|ref|YP_002253928.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|207743121|ref|YP_002259513.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
gi|83724744|gb|EAP71903.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|206588730|emb|CAQ35693.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|206594518|emb|CAQ61445.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
Length = 346
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 61/314 (19%), Positives = 106/314 (33%), Gaps = 53/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101
L+ D+ +L +L + LR+ + V
Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKAKLRPMDEFIAITVAGPDAADALREAGAVLPDTEAVY 152
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148
Q T R A W + + + + L
Sbjct: 153 TVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDWLG 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + ++ G+VV G L ++D +D A G A
Sbjct: 272 VNAPT-SAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSVIHLATADGPA 330
Query: 257 LTVHGVRVKASFPH 270
LT+ +
Sbjct: 331 LTLQHLPYTIPVAE 344
>gi|85059975|ref|YP_455677.1| putative global regulator [Sodalis glossinidius str. 'morsitans']
gi|118577998|sp|Q2NRF3|YGFZ_SODGM RecName: Full=tRNA-modifying protein ygfZ
gi|84780495|dbj|BAE75272.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 328
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 36/250 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +T DV +L +A +GK+ + +
Sbjct: 20 LTLISLEDWALVTLNGADTVKYLQGQLTCDVASLDADRFSFAAHCDAKGKMFSHLCVFHH 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS RDS + +L Y + S I ++
Sbjct: 80 HDGMAFIE-RRSVRDSQLAELKKYAVFSKTTITADDDAVLLGVAGFQAQAALGGLFTSVP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
++ +Q+ T S RF ++ D L H+ G + +D + + L I
Sbjct: 139 NAAHPVAHHQDTTLLYFSLPAPRFLLITTPAVRDALQHKLEGQAQ--LNDSQQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G D T F P A + L+GIS KGCY GQE+V+R ++R ++ + G
Sbjct: 197 AGYP--VIDSANGTQFIPQAANVQALDGISFNKGCYAGQEMVARAKYRGANKRALYWLAG 254
Query: 210 TDDLPPSGSP 219
PP+
Sbjct: 255 KASHPPAAGD 264
>gi|59712704|ref|YP_205480.1| folate-dependent regulatory protein [Vibrio fischeri ES114]
gi|75353458|sp|Q5E304|YGFZ_VIBF1 RecName: Full=tRNA-modifying protein ygfZ
gi|59480805|gb|AAW86592.1| predicted folate-dependent regulatory protein [Vibrio fischeri
ES114]
Length = 318
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 26/245 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +T DV++L +GK+ F + D +
Sbjct: 25 LNDWALITMIGADKKSYLQGQVTCDVVSLAQDEITFGGHCDAKGKLWSIFQLFHHN-DGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSFIDER 119
L +S ++ + ++ Y + S V I I L W +HT SN++ +
Sbjct: 84 ALFQRKSAIETELTEIKKYAVFSKVDISISDEILLGFTGDKALEWINQHTDSNANVRVSK 143
Query: 120 F------SIADVLLHRTWGHNEKIAS--------DIKTYHELRINHGIVDPNTDFLPSTI 165
F S LL T E++ S D + I H + + +
Sbjct: 144 FGTFAKVSDTQWLLVTTDDKKEELLSLLSEATLCDEAIWSLHHIKHALPQIDAPLC-NEH 202
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ +++G + P +G I +
Sbjct: 203 IPQALNLQAINGISFKKGCYTGQETVARAKYRGINKRAMYLLSGLSEARPCAGDAI---E 259
Query: 225 IEIGT 229
+G
Sbjct: 260 RSVGE 264
>gi|89094638|ref|ZP_01167575.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92]
gi|89081108|gb|EAR60343.1| aminomethyl transferase, putative [Oceanospirillum sp. MED92]
Length = 338
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 65/298 (21%), Positives = 113/298 (37%), Gaps = 40/298 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L +Q + V G FLQ +T DV + + + A +G +L F + K E+
Sbjct: 33 IPLIHQRVLSVKGPDTEKFLQGQLTCDVAEVFSRGSALGAHCNIKGHMLSLFRLLKAGEE 92
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQEHTFSNSSFIDER-- 119
+L + + DS + L Y + S I+G+ ++ F
Sbjct: 93 EVLLRMSQDIFDSAANNLKKYIVFSKAEASEVSDEISGLGITGPGAEALVEQFFGRAPSE 152
Query: 120 ----FSIADVLLHRTWGH-------------------NEKIASDIKTYHELRINHGIVDP 156
+++ L+ R G+ +E + I GI D
Sbjct: 153 DNGILPLSNGLVVRVPGNRFEIWMATAELCELLSKLPDEVSIGSTDAWVLSEIEAGIPDL 212
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215
+ P L+G+S KGCY GQE+V+R+QHR ++K +I G D P
Sbjct: 213 -REATQEAFIPQMTNFQALDGVSFKKGCYTGQEIVTRLQHRGQLKKPMYLIEVGGDKKPM 271
Query: 216 SGSPILTDDIE-IGTLGVVV---GKK--ALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+G I + D G + + G + ALA+ + + L ++G V+ +
Sbjct: 272 AGDVITSPDKPNAGQVVISAPINGGRYKALAVI-----VKTLAEKGDLLLNGSEVELT 324
>gi|269467784|gb|EEZ79542.1| aminomethyltransferase [uncultured SUP05 cluster bacterium]
Length = 265
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 15/253 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+N+S +K+ G FLQ + D+ L + +A QGKI+ + K ++D
Sbjct: 3 TQLTNRSLLKLSGGDTQSFLQGQFSNDIDALEGGAVQLNAYCQHQGKIIALLWVIKRDDD 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F L + + +L +K+ S+V I + L E D F +
Sbjct: 63 -FYLSFPSDLAELVTKRLTMFKMMSDVTITDVSNEVIQLGVIDEEF-------DGAFKLN 114
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTK 182
D +E SD + + I +G+ + + P +D+ G+S TK
Sbjct: 115 DQQSVALVDKHEFDLSDESNWEKACIENGMAEVYLN-TSEQFVPQLLNLDINEVGVSFTK 173
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKK 237
GCY GQEVV+R+ + ++R + T D+ ++ G+VV K
Sbjct: 174 GCYPGQEVVARLHYLGKSKRRMRVFTCDADVNIGDELVVAGSKSAKASGIVVRCVKLDSK 233
Query: 238 ALAIARIDKVDHA 250
+L +A ++
Sbjct: 234 SLCLATVEVAHED 246
>gi|152978102|ref|YP_001343731.1| aminomethyltransferase [Actinobacillus succinogenes 130Z]
gi|150839825|gb|ABR73796.1| aminomethyltransferase [Actinobacillus succinogenes 130Z]
Length = 273
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 11/219 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + I+V G A +LQ +TADV L + +A P+GK+ F + ++ E
Sbjct: 5 IELSQYTLIRVEGDDAESYLQGQLTADVTALAAGDSTFTAHCDPKGKMSAVFRLIRLSEK 64
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F I + +D+L Y + S V + V + E + +F+
Sbjct: 65 RFYALIRTCLLPAALDQLKKYAVFSKVAFTQEEAEPVGIIGETELP------VQAKFNNR 118
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTK 182
+L++ +D + I G T+ P + + +S K
Sbjct: 119 AILIN--PQSAVAFNADSALWDLADIQQGYP-ILTEQSQFEFIPQALNLQAIEQAVSFHK 175
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMII-TGTDDLPPSGSPI 220
GCYIGQE V+R ++R ++ + TD +P G I
Sbjct: 176 GCYIGQETVARAKYRGANKRAMYVFKAATDSIPECGGEI 214
>gi|221068070|ref|ZP_03544175.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1]
gi|220713093|gb|EED68461.1| folate-binding protein YgfZ [Comamonas testosteroni KF-1]
Length = 318
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 87/247 (35%), Gaps = 20/247 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I+ G A FL ++ D L + AR +A T +G++L F+ + D
Sbjct: 13 TPISHLGVIRAVGADAASFLHGQLSNDFALLKFDQARLAAFCTAKGRMLASFIGFRRSAD 72
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------ 111
+L DRS + +L + LR+ + + + +
Sbjct: 73 EIVLICDRSLLAPTLKRLSMFVLRAQCKLSDATADFALYGLTGQAAQHHAGAAAAPWTLS 132
Query: 112 --NSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTI 165
+ + + A G + + + G+ + +
Sbjct: 133 QQGDAHVLALYPAAGNQRALWIGPAGQAPEGQLLSEDLWQWSEVQSGVATLSAPVV-DAF 191
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L G++ KGCY GQEVV+R Q R +++R ++ L G + + +
Sbjct: 192 VPQMLNYESLGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVHAEQAL-SVGQEVFSAED 250
Query: 226 EIGTLGV 232
G
Sbjct: 251 LEQATGT 257
>gi|121996857|ref|YP_001001644.1| glycine cleavage T protein (aminomethyl transferase)
[Halorhodospira halophila SL1]
gi|121588262|gb|ABM60842.1| glycine cleavage T protein (aminomethyl transferase)
[Halorhodospira halophila SL1]
Length = 318
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/297 (21%), Positives = 113/297 (38%), Gaps = 48/297 (16%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + V G A FLQ I+TAD+ K + + + TP+G++L + +D + L
Sbjct: 28 YAVVAVTGDEAQDFLQRILTADIPPPAAKHSVLAGLCTPKGRLLALARLIPW-DDGYRLV 86
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS------- 121
+ + + +L Y LRS V + + ++ + + ER
Sbjct: 87 LPDDVAGATVSRLQMYVLRSRVTVAPPTPDWRLVRAAGPGAR---AVLAERCGHPLPEVD 143
Query: 122 -----IADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGIVD 155
AD+ + R G E+ ++D + + I G +
Sbjct: 144 GGVSHSADMAIVRMPGTPERYCAVGPASPVQALEHALAEYLPSADTAAWRAIEIRAGQPE 203
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
P +D L G+S +KGC+ GQEVV+R +R +++R GT P
Sbjct: 204 IRAP-GRELFIPQMVNLDRLGGVSFSKGCFPGQEVVARTHYRGKVKQRMFRAAGTGPAPA 262
Query: 216 SGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G I + G + G ALA R +++ A L+ G R++ S
Sbjct: 263 DGCEIRDAEGQLAGHIVCAAEVPEGFVALASLREAQLETA-----PLSADGQRLRLS 314
>gi|325266245|ref|ZP_08132924.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
gi|324982207|gb|EGC17840.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
Length = 282
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 95/271 (35%), Gaps = 17/271 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L I+V G FL + D+ L K A + TP+G+++ L ++
Sbjct: 3 TLLPFFGVIRVTGDDRHEFLHNQFSNDIKNLSEKTACYATYNTPKGRVIANMLAYCADDA 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F++ + + + +L + LR+ V +E+ GV + S + S
Sbjct: 63 VFLI-LAADLAEKVAKRLRMFVLRAKVQMEVLADWGVAGCLPENAPVVYPSEPKLQLSCN 121
Query: 124 DV-----------LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
+ L A+ ++ I G + T
Sbjct: 122 EAGQIELPHGGCLTLAPKSDLPAHDAAAESAWNRHEILCGYP-WISAATSETCVAQMLNQ 180
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLG 231
+ G+ KGCY GQE+++R Q+R +++ + P +G P+ E G +
Sbjct: 181 HTIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAVAENAVPQP-AGVPVQDAQQAEAGIVI 239
Query: 232 VVVGKKALAIARIDKVDHAI--KKGMALTVH 260
G L + + H++ + G V
Sbjct: 240 NQSGSLHLLVVKHAAAQHSMFAEDGSPFAVQ 270
>gi|269960415|ref|ZP_06174788.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834842|gb|EEZ88928.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 322
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSMLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
D + + +S + + ++ Y + S V IE + ++ F ++ +D
Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVTIEESSDVVLGVAGENADAFISTLNVDSGD 139
Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161
+ + LL T + + D + + I + D
Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLVEDSQATLTTHELWTRFDIEAALPYVAAD-A 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G G +
Sbjct: 199 QNEHIPQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AEALGEGAI 257
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 258 ELERSVGENWRSVGA 272
>gi|213405489|ref|XP_002173516.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275]
gi|212001563|gb|EEB07223.1| glycine cleavage T-protein [Schizosaccharomyces japonicus yFS275]
Length = 334
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 53/299 (17%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+ +++ + + G + FLQ + V+ + SA L + L+ + + D
Sbjct: 27 FFADRRLVFIEGIDTVKFLQGLAANKVV---AGEPKYSAFLNAKRTQLVDN--VQGQGDA 81
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII------------------EIQPINGVVLSWNQ 106
F +EID ++ + + L ++LR+ V + E +G+V +
Sbjct: 82 FAIEIDATRAAAFLQHLQRFQLRAKVRLAPVDPSRWCVQATWNDTREDSSDDGLVDTREH 141
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI--KTYHELRINHGIVDPNTDFLPST 164
T + D RF + + A ++ + Y RI G+ + + +
Sbjct: 142 LITSPLTQLWDPRFPETNNVRRAIVPPTSAPAQELSMEAYKAFRIQKGVAEGQREIISGE 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL----------- 213
FP ++ D L+G+ KGCY+GQE+ R R RKR + +
Sbjct: 202 AFPLESNFDKLHGVHFQKGCYLGQELTYRSYQRGTTRKRILPFQLSKRPDDFSKRISYSS 261
Query: 214 ----PPSGSPILTDDIEI-------------GTLGVVVGKKALAIARIDKVDHAIKKGM 255
P+ + + + G + G L + R+D +D ++ G
Sbjct: 262 SPFSVPAANELSLSEATGTDASTQTRTRRGPGRVLTTQGNIGLGLIRLDYIDQVLRWGE 320
>gi|294925549|ref|XP_002778949.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887795|gb|EER10744.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 345
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTL-------PYKIARGSA-ILTPQGKILLYFL 56
L ++ IKV GK + FLQ + T D+ + P + + +A L+P+G++L L
Sbjct: 25 PLKSRGLIKVSGKGTLNFLQGLCTQDISRVFGAKAEAPMEQSAAAAVFLSPKGRVLFDCL 84
Query: 57 ISK----------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100
+ E++ ++++D D+++ + +++ + IE GV
Sbjct: 85 MYSGVSLKPDSSEGIVSDDKGEESLVVDVDEGVLDNVMRLFIRHRVHLPLNIEKLDNLGV 144
Query: 101 VLSWNQEHTFSNSS-----FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIV 154
+ ++ + + D R + D+ L ++ A + Y LRI +
Sbjct: 145 YWTPSKSQNGCDGDTEVPVYEDPR--VKDLGLRAILPKSDIDAESTEALYRRLRIGLVVP 202
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL- 213
+ + P + P + +DL N I+ KGCYIGQE+ +R + +RKR + D+
Sbjct: 203 EGPKEMTPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRASKKLAVRKRLFGMRIDGDVD 262
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKASF 268
SG+ I+ D +IG + + + + I ++ KGM + V+A+
Sbjct: 263 VESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP--KGMQMNTKQAMVEATK 316
>gi|114561743|ref|YP_749256.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
frigidimarina NCIMB 400]
gi|114333036|gb|ABI70418.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
frigidimarina NCIMB 400]
Length = 320
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 23/228 (10%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L++ I++ G+ F+ +T D+ +L + A P+GK+L F I +
Sbjct: 23 SLTHMGLIEITGEQGRSFIHGQVTTDITSLGTNEWKWGAHCDPKGKMLASFRTFSIGDSL 82
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFID----- 117
F+L + +S + +L Y + S + N + ++ +Q F+ +F D
Sbjct: 83 FML-LPKSTLSLDLPQLQKYAVFSKAELADVSNNYQIIGIAGSQAQAFATENFGDVSQAI 141
Query: 118 ------------ERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
ERF I + + + D + L I G + +
Sbjct: 142 NLVEQGVIIRDGERFIAIINNAAAETIISQSGQTLIDASAWQALEIKAGYPNIDAAH-SG 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ +NGIS TKGCY+GQE ++R+++R ++ II+GT
Sbjct: 201 QYVAQMCNLQAINGISFTKGCYMGQETIARMKYRGGNKRALYIISGTT 248
>gi|242240709|ref|YP_002988890.1| folate-binding protein YgfZ [Dickeya dadantii Ech703]
gi|242132766|gb|ACS87068.1| folate-binding protein YgfZ [Dickeya dadantii Ech703]
Length = 328
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TAD+ L SA +GK+ +
Sbjct: 21 TLISLEDWALVTLTGPDTVKYLQGQLTADITALQPHQHTLSAHCDAKGKMWSDLRLFHYG 80
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ +E RS R++ + +L Y + S + + N V+L + +
Sbjct: 81 DGLAYIE-RRSVRENQLSELKKYAVFSKITLSTDD-NAVLLGAAGHEIRTQLATQFSSLP 138
Query: 122 IADVLLHRTWG-----------------------------HNEKIASDIKTYHELRINHG 152
AD + + G + +D + + L I G
Sbjct: 139 DADTPVVQQDGATLLYLPQPTERFLLVLTPETAHSLVAAFEHRIAFNDSRQWLALDIAAG 198
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211
++ + P + L IS TKGCY GQE+V+R ++R ++ ++GT
Sbjct: 199 QPIIDS-ANSAQFIPQATNLQALQAISFTKGCYTGQEMVARAKYRGANKRALYWLSGTAT 257
Query: 212 DLPPSGSPI 220
LP +G +
Sbjct: 258 SLPSAGDEL 266
>gi|294788261|ref|ZP_06753504.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC
29453]
gi|294483692|gb|EFG31376.1| putative tRNA-modifying protein YgfZ [Simonsiella muelleri ATCC
29453]
Length = 274
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 13/261 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L I+V G FL + D+ L A + TP+G+++ ++
Sbjct: 3 TLLPFFGVIEVSGDDRHDFLHNQFSNDINHLSENQACYATYNTPKGRVIANMIVVN-SGS 61
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L + + ++ +L + LR+ V ++I GV S + S + I
Sbjct: 62 VIHLILAADLVEKIVKRLKMFVLRAKVQLDILSDWGVSGSLKDDAQPIFPSEPHLQLGIN 121
Query: 124 DV----LLH----RTWGHNEKI---ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
++ L H + NE + ++ I G T
Sbjct: 122 ELGEIQLPHSGCLKIAPKNELPLHYVAAESRWNTHEILSGYP-WICAATTETCVAQMLNQ 180
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ G+ KGCY GQE+++R Q+R +++ I + + E G +
Sbjct: 181 HNIGGVHFRKGCYPGQEIIARAQYRGQVKRGLAIARNPNPQIAGAPVQDANGEEAGLVLN 240
Query: 233 VVGKKALAIARIDKVDHAIKK 253
VG L + + V ++
Sbjct: 241 SVGDLNLLVVKYGVVSSELRD 261
>gi|288941015|ref|YP_003443255.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180]
gi|288896387|gb|ADC62223.1| folate-binding protein YgfZ [Allochromatium vinosum DSM 180]
Length = 342
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/302 (19%), Positives = 105/302 (34%), Gaps = 39/302 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I G A FLQ +T D+ L + SA + +G+IL F +++E T
Sbjct: 38 LSHLGLIAARGADAASFLQGQLTNDIRELSASHTQLSAHCSQKGRILTLFRALRLDE-TI 96
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115
L+ + I +L + LR+ V + + + E + +
Sbjct: 97 YLQTPMERVAESIQRLSRFILRAKVTLNDASDELIRIGLAGETAPALLAAQGLPVPERDN 156
Query: 116 ---------------IDERFSIAD--VLLHRTWG--HNEKIASDIKTYHELRINHGIVDP 156
RF + L W + ++ + L I G+ +
Sbjct: 157 GLVQSDDVAVIRIPGPTPRFELIGPFEPLRALWEALAPQAAPANATDWTRLDIQAGLPN- 215
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215
D T P + ++G+S KGCY GQEVV+R+Q +++R + D PP
Sbjct: 216 VYDRTVETFVPQMLNLQRIDGVSFNKGCYTGQEVVARMQFLGKLKRRMYLAEVERDAPPQ 275
Query: 216 SGSPI----LTDDIEIGTLGVVV--GKKALAIARI-DKVDHAIKKGMALTVHGVRVKASF 268
G + G + G + A+ + + + L G +
Sbjct: 276 PGEELSAASSASQQTEGWVVDACPIGDRRHALLVVTETAAVDSGHDIRLGADGPTLSLRE 335
Query: 269 PH 270
P
Sbjct: 336 PP 337
>gi|149192318|ref|ZP_01870526.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1]
gi|148833851|gb|EDL50880.1| hypothetical protein VSAK1_07919 [Vibrio shilonii AK1]
Length = 323
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 21/243 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ +++ G +LQ +T DV++L + A +GK+ F + IE
Sbjct: 26 LNRWGALEMTGDDRKSYLQGQVTCDVVSLEQNQSTFGAHCDAKGKVWSAFRLCHIENGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI--IEIQPINGVVLSWNQEHT---FSNSSFI---- 116
+++ +S + + +L Y + S V I +P+ GV+ + Q+ F S +
Sbjct: 86 MIQ-PQSALEKELTELKKYAVFSKVELIISTKPLIGVMGTSAQQWINQQFPTSGAVRQNK 144
Query: 117 --------DERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
DER+ + L +E + + + I G+ + +
Sbjct: 145 GSTAIQINDERWMLLVDGDLQSLLSSDSELLWVAESLWTKFDIEQGLPILEAE-QQNQHI 203
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
P + L+GIS KGCY GQE V+R ++R I ++ + G D P S I+ +
Sbjct: 204 PQALNLQALDGISFNKGCYTGQETVARAKYRGINKRMLANVRGLLDSPLSDDDIIDIERS 263
Query: 227 IGT 229
+G
Sbjct: 264 VGE 266
>gi|326794158|ref|YP_004311978.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1]
gi|326544922|gb|ADZ90142.1| folate-binding protein YgfZ [Marinomonas mediterranea MMB-1]
Length = 305
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 27/267 (10%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+ FI V GK A FLQ +TADV + + A TP+G+++ FLI ++ ++
Sbjct: 18 SLTELGFIHVEGKDAQKFLQGQVTADVSKVTSGASSFGATCTPKGRVISNFLICQVADEQ 77
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------WNQEHTFSNSSFIDE 118
++L + S + + Y + + S N E + +
Sbjct: 78 YLLTLHSSLVEKTLAHFKKYAVFFKATLTDASDTYAAFSEYARSLDNDETPQDEYALLHP 137
Query: 119 RFSIADVLLHRT-------------WGHNEKIASDIKTYHELR-INHGIVDPNTDFLP-S 163
I DVL + H + A+ + R I+ + P +
Sbjct: 138 TQKIGDVLSIQLNNTYFSETLSIVPAEHLQDKATTNE--EAHRVISLLTLRPFIELKDSE 195
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
I P M IS TKGCY GQE+V+R+++R +K +++ +L +
Sbjct: 196 EILPQWFNMQRNGSISFTKGCYTGQEIVARMKYRGKSKKHMALLSSESELTTGMDVANQE 255
Query: 224 DIEIGTLGVVV----GKKALAIARIDK 246
IGTL V A AI +D+
Sbjct: 256 GKVIGTLHDVASFDSSYVAQAILNVDQ 282
>gi|226939930|ref|YP_002795003.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter
hongkongensis HLHK9]
gi|226714856|gb|ACO73994.1| glycine cleavage T-protein (aminomethyl transferase) [Laribacter
hongkongensis HLHK9]
Length = 326
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 99/267 (37%), Gaps = 35/267 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS+ + + G A FLQ ++ D+ + + A+ S+ T +G++L FL+ + E
Sbjct: 26 LVPLSDFAVLDFSGADAETFLQGQLSNDIRQVSPQAAQWSSYSTAKGRMLANFLVWQ-ES 84
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
+ L + ++ +L + LRS V Q + V+L
Sbjct: 85 GHYQLMLSAGLAAAIDKRLNMFILRSKVS-HRQRDDLVLLGLTGPAAERVMQQSGLAVPA 143
Query: 110 ---------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
F+ A + L + + + + I G
Sbjct: 144 TGLAVETLSEGCVIRLPEGRFVLALAPAAAMSLWPQLCAHGAKPAPMTNWTLSDIATGTP 203
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
T P A ++L+ G+S KGCY GQE+V+R Q+ +++R
Sbjct: 204 -WITQATQEAFVPQMANLELIGGVSFQKGCYPGQEIVARTQYLGKVKRRMFRALADAQAM 262
Query: 215 PSGSPILT---DDIEIGTLGVVVGKKA 238
P G + + + IG + + V +A
Sbjct: 263 P-GDELFSVETGEQAIGKVMLAVATEA 288
>gi|296135946|ref|YP_003643188.1| folate-binding protein YgfZ [Thiomonas intermedia K12]
gi|295796068|gb|ADG30858.1| folate-binding protein YgfZ [Thiomonas intermedia K12]
Length = 314
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 110/314 (35%), Gaps = 50/314 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++
Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV---------------------- 100
+ L +D S + + +L + LR ++
Sbjct: 65 EQIGLLLDASIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLAPPAQP 124
Query: 101 -----------VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+L Q + + ER A L + ++R
Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQAAQAALRAELAVLPALPPSEWALQDIR- 183
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ P +L+ G++ KGCY GQEVV+R Q+R +++R ++TG
Sbjct: 184 -AGLPHLTA-ATQQLFVPQMLNFELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVTG 241
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK--------KALAIARIDKVDHA-----IKKGMA 256
+ P G ++ GVVV ALA +I + +G
Sbjct: 242 PAAMQP-GQELVHAADPGQPCGVVVNAAADTAGVWWALAELKIALAEQPGLHRGSAEGPE 300
Query: 257 LTVHGVRVKASFPH 270
L + + + P
Sbjct: 301 LKLGALPYALTAPD 314
>gi|85712969|ref|ZP_01044008.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
gi|85693207|gb|EAQ31166.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
Length = 299
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 10/249 (4%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L++ + V G A FLQ +TA+V L SA P GK L F + +
Sbjct: 16 LCPLASYGLLSVTGDDARSFLQGQLTANVNALKPGDLCYSAHCEPTGKTLSVFWLYCHSD 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDER 119
+ F L + S + + Y + + V E + + ++ ++ N + + +
Sbjct: 76 NEFWLILKHSAIAPSLAQFEKYGVFNKVTFEDKSSDLNLIGLVGSSETFELPNEADLIAK 135
Query: 120 FSIADVLLHRTWGHNEKIA--SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+ + +I SD K + L I ++ P + +G
Sbjct: 136 LKVGSEPNQFVLVYKSEIESNSDEKLWDALEIERVRPQLISELTQQ-FVPQMLNVQAWDG 194
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK 236
I KGCYIGQE V+R+++ ++ ++GT +P G+ + + ++G G
Sbjct: 195 IDFKKGCYIGQETVARMRYLGKQKRALFRVSGTAHVPFEVGAQV---ERKVGENWRRGGT 251
Query: 237 KALAIARID 245
+A+ R D
Sbjct: 252 IIMAVNRTD 260
>gi|90412075|ref|ZP_01220082.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK]
gi|90327053|gb|EAS43432.1| hypothetical protein P3TCK_24856 [Photobacterium profundum 3TCK]
Length = 329
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 109/274 (39%), Gaps = 34/274 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I + G +LQ +T DV++LP + A +GK+ F +
Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPVNSSTLGAHCDAKGKMRTIFRLFNH 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116
E L+ +S D+ + +L Y + S V I+ + LS Q + F
Sbjct: 84 NEGYGFLQ-RKSVMDTQLPELKKYAVFSKVDIDASNDVLLGLSGEQAQAVIDQHFPGNGD 142
Query: 117 -------------DER--FSIADVLLHRTWG-----HNEKIASDIKTYHELRINHGIVDP 156
D+R F+IA + HN SD + + + I
Sbjct: 143 VRVITAGTAIKVNDDRWLFAIAPEQAEQLINTLVETHNSMQLSDSTLWDLYDVLYAIPRV 202
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PP 215
+ P + ++GIS KGCY GQE V+R ++R I ++ I+TG P
Sbjct: 203 DA-VTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPL 261
Query: 216 SGSPI---LTDD-IEIGTLGVV---VGKKALAIA 242
+G + + D+ + GTL +A+A+
Sbjct: 262 TGDALERSVGDNWRKGGTLLASYLYADDQAIALV 295
>gi|270264911|ref|ZP_06193175.1| putative global regulator [Serratia odorifera 4Rx13]
gi|270041209|gb|EFA14309.1| putative global regulator [Serratia odorifera 4Rx13]
Length = 328
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/298 (20%), Positives = 114/298 (38%), Gaps = 43/298 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L A +GK+ +
Sbjct: 20 LTLISLEDWALVTLSGPDRVKYLQGQVTADIEALAADRHVLCAHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
ED LE RS DS + ++ Y + S + I + ++
Sbjct: 80 GEDFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAVDSEAVLLGVAGFQARAALAGVFNSLP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + E T + S ERF ++A+ L + E +D + + L I
Sbjct: 139 DAEHQVVQDGETTLLHFSAPAERFLLVTTAAVAEQLTVKLNEQAE--LNDSQQWLTLDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + L GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 197 AGYPVIDA-ANSGQLIPQATNLQALEGISFSKGCYTGQEMVARAKFRGANKRALYWLEGN 255
Query: 211 DDLPPSGSPILTDDIEIG----TLGVVVGKKALAIARI---DKVDHAIKKGMALTVHG 261
P + L ++++G G V+ LA R+ +++ + L V
Sbjct: 256 AGRVPLAAEDL--ELQLGDNWRRTGTVLAAGKLADGRLWVQAVLNNDLDADSKLRVRD 311
>gi|66811634|ref|XP_639996.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4]
gi|74853999|sp|Q54NS1|CAF17_DICDI RecName: Full=Putative transferase caf17 homolog, mitochondrial;
Flags: Precursor
gi|60466925|gb|EAL64969.1| hypothetical protein DDB_G0285011 [Dictyostelium discoideum AX4]
Length = 408
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 47/262 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISK 59
V L ++S IKV G A+ LQ + T ++ L + + L G++L +IS
Sbjct: 15 VPLKSRSLIKVVGPDALKHLQGLTTNNLNRLKDNQSTNTSIYNGFLQGNGRLLFDSIISL 74
Query: 60 IEE---------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQP- 96
E D+FI++ID S + + L YKLR+ + II++
Sbjct: 75 DREHHNGNPKPISMAPGSSDNSGLDSFIVDIDSSILEEAMAHLKQYKLRNKIDIIDVTEN 134
Query: 97 ------INGVVLSWNQEHTFSN------SSFIDERFSIADVLL----HRTWGHNEKIAS- 139
++ + + F+ S +D R I V L ++ E+++
Sbjct: 135 FNVYSILDKTYKTVRDDSLFAQLEKDQCSVMMDPRHQIMGVRLLVPNNKQLVVEERLSKY 194
Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
D Y+ R++ GI ++ I P + DLLNG+ KGCY+GQE+ SR
Sbjct: 195 ESKDETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHF 254
Query: 197 RNIIRKRPMIITGTDDLPPSGS 218
+IRKR + + S S
Sbjct: 255 TGLIRKRIFPVVMSVKDVESAS 276
>gi|330797296|ref|XP_003286697.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum]
gi|325083295|gb|EGC36751.1| hypothetical protein DICPUDRAFT_54438 [Dictyostelium purpureum]
Length = 412
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 50/263 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA----RGSAILTPQGKILLYFLISK 59
V L ++S IKV G A+ LQ + T ++ L + + L G++L +IS
Sbjct: 15 VPLKSRSLIKVVGSDALKHLQGLTTNNLNRLKDSQSSNSSIYNGFLQSNGRLLFDSIISL 74
Query: 60 IEE------------------------DTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEI 94
+E D+FI++ID + + + L YKLR+ + II++
Sbjct: 75 DKEHSIKQKAEFVISNGNGNGNGNGVVDSFIIDIDNAVLNDAVAHLKQYKLRNKIDIIDV 134
Query: 95 QPINGVVLSWNQ-EHTFSNSSFI------------DERFSIADVLLHRTWGHNEKIAS-- 139
V ++ T N + D R I V L + I +
Sbjct: 135 TDQYRVYSILDKTYKTVRNDELLSILEDEGCSVMSDPRHQIMGVRLLVPSNKSSSIENHL 194
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
D + YH R++ GI + ++ ++ P + DLLNG+ KGCY+GQE+ SR
Sbjct: 195 AKYETMDEEIYHLFRLSQGIPEGRNEYQWGSVIPLEYNFDLLNGVDFHKGCYLGQELTSR 254
Query: 194 IQHRNIIRKRPMIITGTDDLPPS 216
Q +IRKR + D S
Sbjct: 255 TQFTGLIRKRVFPVVMKVDNVES 277
>gi|293605094|ref|ZP_06687486.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553]
gi|292816497|gb|EFF75586.1| folate-binding protein YgfZ [Achromobacter piechaudii ATCC 43553]
Length = 332
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 100/295 (33%), Gaps = 42/295 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI- 60
L + G A+ FL +T DV LP AR + T +G++L ++ +
Sbjct: 17 PCAPLDDFLVFSASGADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRAA 76
Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSS 114
+ + R ++L+ +L + LR+ V + +N GV S + +
Sbjct: 77 PGADDAPQLYGLVRRDLSEALLKRLSMFVLRAKVKLAATGLNVAGVQASAQEAAALEAVT 136
Query: 115 FIDER---------------FSIADVLLHRTWGHNEKI------------ASDIKTYHEL 147
R AD L W +++ + +
Sbjct: 137 GALPRTPWQRVDLPSGTWIAAPSADARLRWWWIASDEQLQQSSALAGVLSLAPAAHWQVA 196
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ GI P ++L+ G+S TKGCY GQEVV+R +R +++R
Sbjct: 197 DLAAGIP-WIATATQDVFIPQTVNLELVEGVSFTKGCYPGQEVVARSHYRGTVKRRMAYG 255
Query: 208 TGTDDLPPSGS-------PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
T P + IG + + +A + A+ +G
Sbjct: 256 TVEQPGEPGAALAGVDVFDATQPGEPIGRVVDAASEAGVASVLFETTLAALPEGD 310
>gi|121607991|ref|YP_995798.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
gi|121552631|gb|ABM56780.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
Length = 303
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 59/280 (21%), Positives = 109/280 (38%), Gaps = 30/280 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I+V G+ A FL + +T D +L + AR +A L+ +G++ F+ + D
Sbjct: 9 AALSHLGVIRVAGEDAGAFLHSQLTQDFSSLDMRQARLAAFLSAKGRMQASFIGLRRP-D 67
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
++L R + + +L + LR+ + + + + + + +S A
Sbjct: 68 EWLLLCSRDLLPATLARLSMFVLRAKARLTDASADFALYGLAGDTLAAVAGGAQPAWSKA 127
Query: 124 DV----LLHRTWGHNEKIA---------------SDIKTYHELRINHGIVDPNTDFLPST 164
D+ L+H N+ A + + G+ + +
Sbjct: 128 DIGAASLVHLYPAANQPRALWVAPAGDPPPAGPALATALWLWSEVASGVA-TLSSPVAQV 186
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + + G+S KGCY GQEVV+R Q R +++R I D+ G+ +
Sbjct: 187 FVPQMLNYESVGGVSFKKGCYPGQEVVARSQFRGTLKRRAYIAHAEADI-AVGAEVFAAT 245
Query: 225 IEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMA 256
G VV G A+ +I A++ G A
Sbjct: 246 DLTQPCGTVVQAAAAPGGGVDAIVSLQIAAAHQALQVGAA 285
>gi|260753760|ref|YP_003226653.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258553123|gb|ACV76069.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 274
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 29/278 (10%)
Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55
++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F
Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGEPLWSALLTAQGKVLYDF 71
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ E + +++ + + D+LI +L Y+LR + IEI P V S N + SSF
Sbjct: 72 ILWP-EGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSF 130
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R S + ++ A I + + R+ G+ + + +A L
Sbjct: 131 PDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NG+S TKGCY+GQE +R+ R I +R +I L I D+++
Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDEKCRIYYSDLKL-------- 240
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
A+ + R+ + +T P W K
Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266
>gi|56478511|ref|YP_160100.1| putative glycine cleavage T-protein (aminomethyl transferase)
[Aromatoleum aromaticum EbN1]
gi|56314554|emb|CAI09199.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Aromatoleum aromaticum EbN1]
Length = 351
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 102/276 (36%), Gaps = 39/276 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L N I+ G+ + PFL + + DV L + A+ ++ +P+G++L L+ K E D
Sbjct: 48 VPLVNLGIIRSRGEDSAPFLHNLFSNDVKNLSAEGAQWTSFNSPKGRMLASILLWK-EAD 106
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---FSNSSFIDE-- 118
L + +L+ KL Y LRS V + ++ + + +
Sbjct: 107 GHALVMSADLLPALLKKLSMYVLRSKVKLADDGAETALVGVSGSEAGQVLARAGLAVPAA 166
Query: 119 -------------RFSIADVLLHRTWGHNEK----------IASDIKTYHELRINHGIVD 155
R + L+ G + + + + G+
Sbjct: 167 APTQTVTGDTRCIRLDDNNFLVALPVGEAPQAFGALLAAGATKAGTAAWQLAMVRAGVP- 225
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T +++ G+S KGCY GQE+V+R Q+ ++KR + D P
Sbjct: 226 LITVPTQEEFVAQMLNYEIIGGVSFQKGCYPGQEIVARTQYLGKLKKRMYRVRIADGAEP 285
Query: 216 -SGSPILT---DDIEIGTLGVVV-----GKKALAIA 242
G+ + D G L V G +ALA+
Sbjct: 286 LPGADVFAPEFGDQSAGKLVNVAPSPEGGFEALAVM 321
>gi|238754568|ref|ZP_04615922.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473]
gi|238707199|gb|EEP99562.1| tRNA-modifying protein ygfZ [Yersinia ruckeri ATCC 29473]
Length = 311
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 95/251 (37%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ + L + + + V G + +LQ +TA+V TL +A +GK+ +
Sbjct: 1 MTLISLEDWALVTVTGADRVKYLQGQLTANVETLAPDQHVLTAHCDAKGKMWSDLRLFHR 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E +E R+ ++ + +L Y + S V P + ++L E+ +
Sbjct: 61 GESFAFIE-RRNLLENQLAELKKYAVFSKVTFA-APADCILLGVAGENAREALAQSFPEL 118
Query: 121 SIAD---------VLLHRTWGH--------------------NEKIASDIKTYHELRINH 151
A+ LLH T ++ + + + L I
Sbjct: 119 PTAEKSVVQCGETTLLHFTLPAERFLLVTEAIQVQNLIDKLGDQAQLNSSQQWLALEIEA 178
Query: 152 GIVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G D + P + L GI TKGCY GQE+V+R ++R ++ + G
Sbjct: 179 GFP--VIDSPNSAQFIPQATNIQALAGICFTKGCYTGQEMVARAKYRGANKRALYWLAGQ 236
Query: 211 DD-LPPSGSPI 220
+ +P +G +
Sbjct: 237 AERVPEAGEDL 247
>gi|300722120|ref|YP_003711402.1| hypothetical protein XNC1_1126 [Xenorhabdus nematophila ATCC 19061]
gi|297628619|emb|CBJ89197.1| putative enzyme [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 34/252 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G A +LQ +TAD+ +L +A +GK+ F + +
Sbjct: 20 LTLISLDDWGMVTATGADAQKYLQGQVTADIASLNANQHVLTAHCDAKGKMWSNFRLFQR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN---GVVLSWNQEHTFSNS---- 113
E +E RS ++ + +L Y + S V + GV + ++E +
Sbjct: 80 GEGFAYIE-RRSLLETQLTELKKYAVFSKVTFAKDEESILLGVAGTGSREALATRFPTLP 138
Query: 114 -----------------SFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ ERF + A L + +D + + L I
Sbjct: 139 DAESPVIQHETTTLLYLALPAERFLLVTDKTTATQLTETLVEQFQSQLNDSQQWLALEIE 198
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + + P + + N IS KGCY GQE+V+R + R ++ + G
Sbjct: 199 AGFPVIDA-AGSAQFIPQATNLQAIENSISFKKGCYAGQEMVARAKFRGANKRAMYWLAG 257
Query: 210 T-DDLPPSGSPI 220
LP +G +
Sbjct: 258 QASSLPVAGDDL 269
>gi|94500782|ref|ZP_01307311.1| aminomethyl transferase, putative [Oceanobacter sp. RED65]
gi|94427104|gb|EAT12085.1| aminomethyl transferase, putative [Oceanobacter sp. RED65]
Length = 294
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 106/289 (36%), Gaps = 22/289 (7%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ S +++ ++ + G + F+Q T D+ A +G+++ F +S I
Sbjct: 4 LQSYSINDCDYLIIQGPDSAKFMQGQFTCDINQATSHQFLRGACCNAKGRMVASFDLSLI 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++D ++L + + D L + L Y + I ++ ++ F R
Sbjct: 64 DKDQYLLVMAKGLADILQNHLKKYAVFFKAEI-VKKQFNAYHFDTITNSDLTEDFSQSRT 122
Query: 121 SI---------ADVLLHRTWGHNEKIAS------DIKTYHELRINHGIVDPNTDFLPSTI 165
A + + I + + + RI G+ + +
Sbjct: 123 GERLIKRQGFNAGFDVIQLSADASGIDATVNVKQPSQDVNLARIQAGLARVTPE-TSEEL 181
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P + L NG+S KGCY GQE+V+R+Q+ +++ + + G + D
Sbjct: 182 IPQMLNLQLTNGVSFKKGCYTGQEIVARMQYLGKLKRHCYRVAF-NQAAEVGDSLFAGDK 240
Query: 226 EIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
IGTL + G + LA+ ++ + G T V P
Sbjct: 241 SIGTLVNLAANGDGFEGLAVIEDKHLNAPLTLGSQSTPIEVLCLPYEPQ 289
>gi|91227863|ref|ZP_01262036.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01]
gi|91188373|gb|EAS74669.1| hypothetical protein V12G01_13864 [Vibrio alginolyticus 12G01]
Length = 322
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 97/255 (38%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +LQ +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNFGMITMIGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118
+ +++ +S D ++++ Y + S V IE I GV E + S
Sbjct: 81 HDGYGMIQ-PKSAIDVELNEIKKYAIFSKVTIEASDDVILGVAGVKADEFISTMSKTTGS 139
Query: 119 RFSIAD----------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161
++ LL + ++I ++ I G+ +
Sbjct: 140 VRAVDGGTAVQVAQDRWLLILSAPEAQQIVETTDAVFTTNELWNRFDIEAGLP-FVSASA 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 259 L-ERSVGENWRSVGA 272
>gi|300704089|ref|YP_003745691.1| aminomethyl transferase [Ralstonia solanacearum CFBP2957]
gi|299071752|emb|CBJ43076.1| putative aminomethyl transferase [Ralstonia solanacearum CFBP2957]
Length = 346
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/314 (19%), Positives = 107/314 (34%), Gaps = 53/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL + +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLDQARLAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101
L+ D+ +L +L + LR+ + V
Sbjct: 93 LQTDKLIAPALTRRLTMFVLRAKAKLRPMDEFIAITVAGPDAADALREAGAVLPDTEAVY 152
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148
Q T R A W + + + + L
Sbjct: 153 TVAQQPATVGQQVGATIRLPDAGGRPRYQWLVHAEHFQHAWKTLSSRLALVGTEVWDWLG 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIK----KGMA 256
+G+ + ++ G+VV G L ++D +D AI G
Sbjct: 272 VNAPT-SAGAEVFSESDPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSAIHLATADGPV 330
Query: 257 LTVHGVRVKASFPH 270
LT+ +
Sbjct: 331 LTLQHLPYAIPVAE 344
>gi|308188001|ref|YP_003932132.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1]
gi|308058511|gb|ADO10683.1| tRNA-modifying protein ygfZ [Pantoea vagans C9-1]
Length = 328
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 43/298 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +T DV L +A +GK+ +
Sbjct: 19 LTLMSLDSWALVSITGADSTAYLQGQLTLDVAALDADHHSPAAHCDAKGKMWSNMRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E L I R RD+ + +L Y + S V + + ++
Sbjct: 79 GEGYAYL-IRRDLRDTQLTELKKYAVFSKVTMAADDESVLLGVAGFQARAALANLFDSLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ E T + ERF S A + +++ +D + + L I G
Sbjct: 138 DSEKPVVQQGETTLLWFAHPAERFLIVTSQAQAETLKQKLNDDAQFNDSQQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + P + L+ IS KGCY GQE+V+R ++R ++ + G
Sbjct: 198 IPVIDPATSVQ-FIPQATNLQALDAISFKKGCYAGQEMVARAKYRGANKRALYWLVGQAS 256
Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK--------VDHAIKKGMALTVHG 261
LP + +P+ ++++G G LA ++D +++ ++ L V G
Sbjct: 257 HLPEANAPL---ELQMGERWRRTGSV-LAAVQLDDGISWIQVVLNNDLEPDSVLRVEG 310
>gi|254230558|ref|ZP_04923925.1| protein YgfZ [Vibrio sp. Ex25]
gi|262393261|ref|YP_003285115.1| glycine cleavage T-protein [Vibrio sp. Ex25]
gi|151936916|gb|EDN55807.1| protein YgfZ [Vibrio sp. Ex25]
gi|262336855|gb|ACY50650.1| glycine cleavage T-protein [Vibrio sp. Ex25]
Length = 322
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +LQ +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNFGMITMVGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118
D + + +S D + ++ Y + S V IE I GV E S S
Sbjct: 81 H-DGYGMVQPKSAIDVELSEIKKYAIFSKVTIEASDEVILGVAGVKADELISSMSKTTGS 139
Query: 119 RFSIADVL-----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+ + + + + + ++ I G+ +
Sbjct: 140 VRPVEGGTAVQVSQSRWLLILSASAAQQFIENTDAALTTNELWNRFDIEAGLP-FVSASA 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 259 L-ERSVGENWRSVGA 272
>gi|319779568|ref|YP_004130481.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9]
gi|317109592|gb|ADU92338.1| Folate-dependent protein for Fe/S [Taylorella equigenitalis MCE9]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 28/268 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61
+ + +K+ G FLQ +T D+ + A+ QG++L ++
Sbjct: 3 NQFALLKLSGADVRNFLQGQLTQDINRVSAGQAQFFGYCNNQGRLLATGVMWSDSVDDTN 62
Query: 62 -EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------ 114
+++ + + +S L +L + LR+ V+IE Q + + + E +N
Sbjct: 63 IDESIFMMVHKSIATLLQKRLSMFVLRAKVLIE-QVESSIQAVYEPESDLTNGGTPHFPL 121
Query: 115 -------------FIDERFSIADVLLHRTWGHNEKIASDIKT-YHELRINHGIVDPNTDF 160
F +I+ L+ + H D + I G+ TD
Sbjct: 122 LHCDKGAGLFSVGFPSPNANISRKLIIKLIEHKGVEREDEDQKWATQDILSGLP-WITDK 180
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+D++N IS KGCY+GQEV++R+ +++ ++R + ++ G+ I
Sbjct: 181 TYEKFLAQSLNLDIINAISFNKGCYVGQEVIARLHYKSKPKRRAFPVRFSEHSLIEGADI 240
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVD 248
I G LA ++ ++
Sbjct: 241 YDFGSVINISHFEGGNYVLAEIQLSSLE 268
>gi|119776082|ref|YP_928822.1| hypothetical protein Sama_2950 [Shewanella amazonensis SB2B]
gi|119768582|gb|ABM01153.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 321
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/284 (21%), Positives = 103/284 (36%), Gaps = 38/284 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L++ + V G+ F+ +TAD+ L R A P+G++L F K+
Sbjct: 19 LTLSLLNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWGAHCDPKGRMLATFRTFKL 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +LE RS + + +L Y + S + +L + + F+ F
Sbjct: 79 GDALMMLE-PRSALEVSLAQLKKYAVFSKAELVDMSSELTLLGVSGPEA---AGFVARHF 134
Query: 121 SIADVLLHRT------------------------WGHNEKIASDIKTYHELRINHGIVDP 156
A+ + T + + + L I G +
Sbjct: 135 GTAEADVFSTEQGTVLKDGERFILILDKANACALIEKSGQPLYGAGVWQALEIRAGYPNI 194
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-- 214
S P + L GIS KGCY+GQE V+R ++R ++ I+ G P
Sbjct: 195 AAGHA-SEYIPQMCNLQALGGISFNKGCYMGQETVARTKYRGGNKRALYILFGESQTPVR 253
Query: 215 -PSGSPILTDD--IEIGTLGVVV--GKKAL--AIARIDKVDHAI 251
S I + + G + VV G K L A+ D A+
Sbjct: 254 LESTLEIAVEGGYRKAGNIIEVVSRGNKVLMTAVLANDTAPDAV 297
>gi|299066793|emb|CBJ37987.1| putative aminomethyl transferase [Ralstonia solanacearum CMR15]
Length = 346
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 103/314 (32%), Gaps = 53/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101
L+ D+ +L +L + LR+ + +
Sbjct: 93 LQTDKLVAPALTKRLSMFVLRAKAKLRPMDEFIAITVAGPEAADALRAAGAVLPESDAPY 152
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
Q T R A W + + + L
Sbjct: 153 AVAQQAATVGQQVGAVVRLPDAGSRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + + G+VV G L ++D +D A G
Sbjct: 272 VDAPT-SAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATADGPV 330
Query: 257 LTVHGVRVKASFPH 270
LT+ +
Sbjct: 331 LTLQSLPYAIPVAE 344
>gi|156975802|ref|YP_001446709.1| aminomethyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|166979588|sp|A7MTS4|YGFZ_VIBHB RecName: Full=tRNA-modifying protein ygfZ
gi|156527396|gb|ABU72482.1| hypothetical protein VIBHAR_03546 [Vibrio harveyi ATCC BAA-1116]
Length = 322
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSMLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
D + + +S + + ++ Y + S V IE + ++ F ++ D
Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVTIEESSDIVLGVAGENADAFISTLNADSGE 139
Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161
+ + LL T + + D + + I + D
Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLLEDSQATLTTHELWTRFDIEAALPYVAAD-A 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G G +
Sbjct: 199 QNEHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AEALGEGAI 257
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 258 ELERSVGENWRSVGA 272
>gi|157372133|ref|YP_001480122.1| putative global regulator [Serratia proteamaculans 568]
gi|166979587|sp|A8GIQ4|YGFZ_SERP5 RecName: Full=tRNA-modifying protein ygfZ
gi|157323897|gb|ABV42994.1| glycine cleavage T protein (aminomethyl transferase) [Serratia
proteamaculans 568]
Length = 330
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 34/249 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ LP +GK+ +
Sbjct: 20 LTLISLEDWALVTLNGPDRVKYLQGQVTADIEALPADSHVLCGHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E LE RS DS + ++ Y + S + I ++
Sbjct: 80 GEGFAYLE-RRSVLDSQLAEIKKYAVFSKLTIAADSEAVLLGVAGFQARAALAGVFNSLP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + E T + S ERF ++A+ L+ + H + +D + + L I
Sbjct: 139 DAEHQVVQDGETTLLHFSLPAERFLLVTTAAVAEQLVDKL--HEQAELNDSQQWLTLDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L+GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 197 AGYPVIDA-ANSGQFIPQATNLQALDGISFSKGCYTGQEMVARAKFRGANKRALYWLEGK 255
Query: 211 DDLPPSGSP 219
P +
Sbjct: 256 AGRVPQAAE 264
>gi|304396719|ref|ZP_07378599.1| folate-binding protein YgfZ [Pantoea sp. aB]
gi|304355515|gb|EFM19882.1| folate-binding protein YgfZ [Pantoea sp. aB]
Length = 328
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 43/298 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +T DV L +A +GK+ +
Sbjct: 19 LTLMSLDSWALVSITGADSTAYLQGQLTLDVAALDADHHSPAAHCDAKGKMWSNMRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------IEIQP 96
E L I R RD+ + +L Y + S V + P
Sbjct: 79 GEGYAYL-IRRELRDTQLTELKKYAVFSKVTMAADDECVLLGLAGFQARAALANLFDNLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHG 152
+ + E T + ERF I L +++ +D + + L I G
Sbjct: 138 DSEKPVVQQGETTLLWFAQPAERFLIVTSLSQAEALKQKLNDDAQFNDSQQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + P + L+ IS KGCY GQE+V+R ++R ++ + G
Sbjct: 198 IPVIDPATSVQ-FIPQATNLQALDAISFKKGCYAGQEMVARAKYRGANKRALYWLAGQAS 256
Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK--------VDHAIKKGMALTVHG 261
LP + +P+ ++++G G LA ++D +++ ++ L V G
Sbjct: 257 HLPEANAPL---ELQMGERWRRTGSV-LAAVQLDDGISWIQVVLNNDLEPDSVLRVEG 310
>gi|192361074|ref|YP_001982679.1| hypothetical protein CJA_2216 [Cellvibrio japonicus Ueda107]
gi|190687239|gb|ACE84917.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 322
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/301 (19%), Positives = 112/301 (37%), Gaps = 35/301 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L N + V G A FLQ IT D+ L + A +P+G++LL F +++ D
Sbjct: 15 CHLPNTGLLLVEGPDAAKFLQGQITCDIRELADQKVLLGAQCSPKGRVLLNFYAVQLQPD 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
T L + R+ + L Y + S + ++ + S
Sbjct: 75 TIALRLPRNILEQAQISLGKYIVFSKAKLRKADDAYAIIGLHSSRLDDFSNILGTIPHEP 134
Query: 114 -SFIDERFSIADVL-----------LHRTWGHNEKIAS-----DIKTYHELRINHGIVDP 156
++ID I L L + +A ++ +I GI
Sbjct: 135 LTWIDTPQGIIWRLDETHMELWLKSLTALAPLGQSLAEVASLRTENDWNLAQIQRGITCI 194
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPP 215
+ P + + L+NG++ KGCY GQE+V+R+ +R ++ T P
Sbjct: 195 TPE-TYEQFTPQELNLTLVNGVNFRKGCYTGQEIVARLHYRGHAKRHTYRYHLTSPQAPA 253
Query: 216 SGSPIL-TDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
GS I+ + + IG + + + LA + ++ A + + + + + P
Sbjct: 254 PGSLIVNSAGVNIGHIINIASSGNNQFELLACVTDEHINEAQLRETGEKLQQLPLPYAIP 313
Query: 270 H 270
Sbjct: 314 S 314
>gi|163856818|ref|YP_001631116.1| hypothetical protein Bpet2506 [Bordetella petrii DSM 12804]
gi|163260546|emb|CAP42848.1| conserved hypothetical protein [Bordetella petrii]
Length = 377
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 43/274 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK--- 59
L + + + G A+ FL +T DV LP AR S T +G++L ++ +
Sbjct: 61 CAALPDYAVVAASGADALTFLHGQLTQDVAGLPADAARLSGYCTAKGRLLATLVLWRAQT 120
Query: 60 -------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL---------- 102
E R D+L+ +L + LR+ V + + P+ +
Sbjct: 121 MPEASDAAEAARVYALTRRDLADALVKRLSMFVLRAKVKLAVAPLQAAGVWCSPEGLASL 180
Query: 103 ----------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA----------SDIK 142
+ Q + ++I + + +
Sbjct: 181 QSAAGGALPTAAWQRAELATGTWIAAPSARGALRWWWIASEAQLQQAGALAAQLARGTPD 240
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ + G+ P +DLL+G+S TKGCY GQEVV+R +R +++
Sbjct: 241 QWRGDDLAAGLP-WVAAATQDLFIPQTLNLDLLDGVSFTKGCYPGQEVVARSHYRGTVKR 299
Query: 203 RPM--IITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + G D PP G+ I G V+
Sbjct: 300 RAAYGRLDGQADPPPPGTDIYDAAQPQEPCGRVI 333
>gi|300718207|ref|YP_003743010.1| global regulator [Erwinia billingiae Eb661]
gi|299064043|emb|CAX61163.1| putative global regulator [Erwinia billingiae Eb661]
Length = 327
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 32/257 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + V G + +LQ +T DV L +A +GK+ +
Sbjct: 19 LTLISLEEWALVTVTGADRVSYLQGQVTLDVAALASNGHLPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E LE RS RD+ I +L Y + + V I+ ++
Sbjct: 79 GEGLAYLE-RRSLRDNQITELKKYAVFAKVAIQPDDEAVLLGVAGFQARSALSGFFTALP 137
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVL----LHRTWGHNEKIASDIKTYHELRINHG 152
+ + T + ERF + R E +D + L I G
Sbjct: 138 DAENPVIQQDDTTLLWFAAPAERFLLVTSREKADAVRKGLEGEAQLNDSTQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + + P + L+ IS KGCY GQE+V+R + R ++ + G
Sbjct: 198 LPVIDAE-TSAQFIPQATNLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGAAG 256
Query: 213 LPPSGSPILTDDIEIGT 229
P+ + L ++++G
Sbjct: 257 RVPAANDAL--EMKLGE 271
>gi|307129424|ref|YP_003881440.1| putative folate-dependent regulatory protein [Dickeya dadantii
3937]
gi|306526953|gb|ADM96883.1| predicted folate-dependent regulatory protein [Dickeya dadantii
3937]
Length = 326
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TADV TL A +GK+ +
Sbjct: 19 TLISLDDWALVTLAGPDTVKYLQGQLTADVDTLQAGQHVLCAHCDAKGKMWSNLRLFHYG 78
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQPI 97
+ LE RS RD+ + +L Y + S I + P
Sbjct: 79 DGLAYLE-RRSIRDTQLAELKKYAVFSKTTIAADDNVVLLGAVGLDIRAHLAPLFDALPD 137
Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----DIKTYHELRINHG 152
+ T + + ERF + + R E ++S D + + L I G
Sbjct: 138 ADNAVVQQPGATLLHLAHPAERFLLV-LDAQRAAALIETLSSSVKLNDSRQWQALDIAAG 196
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ + P + L GIS TKGCY GQE+V+R ++R ++ + GT
Sbjct: 197 QPIIDS-VNSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGTGA 255
Query: 213 -LPPSGSPI 220
P +G +
Sbjct: 256 QAPAAGDEL 264
>gi|54310198|ref|YP_131218.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9]
gi|81615002|sp|Q6LMR1|YGFZ_PHOPR RecName: Full=tRNA-modifying protein ygfZ
gi|46914639|emb|CAG21416.1| hypothetical protein PBPRA3100 [Photobacterium profundum SS9]
Length = 329
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 34/274 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I + G +LQ +T DV++LP + A +GK+ F +
Sbjct: 24 LALINLDDWGLITLIGDDKKSYLQGQVTCDVVSLPINASIFGAHCDAKGKMRTIFRLFNH 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---- 116
E L+ +S + + +L Y + S V IE + LS Q F
Sbjct: 84 NEGYGFLQ-RKSVMEIQLPELKKYAVFSKVDIEASSDVLLGLSGEQAQAVVEQHFPGDGD 142
Query: 117 -------------DER--FSIADVLLHRTWG-----HNEKIASDIKTYHELRINHGIVDP 156
D+R F+IA + HN SD + + + I
Sbjct: 143 VRVITAGTAIKVDDDRWLFAIAPEQAEQLINTLVETHNNVQLSDSTLWDLYDVLYAIPRI 202
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPP 215
+ P + ++GIS KGCY GQE V+R ++R I ++ I+TG P
Sbjct: 203 DA-VTALEFIPQAVNLQAVDGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQFPF 261
Query: 216 SGSP----ILTDDIEIGTLGVV---VGKKALAIA 242
+G + + + GTL +A+A+
Sbjct: 262 TGDALERSVGDNWRKGGTLLASYLYADGQAIALV 295
>gi|269965775|ref|ZP_06179872.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829643|gb|EEZ83880.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 322
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 95/255 (37%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +LQ +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNFGMITMIGDDKKSYLQGQVTCDVVSLEQDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDE 118
+ +++ +S D + ++ Y + S V IE I GV E + S
Sbjct: 81 YDGYGMIQ-PKSAIDVELSEIKKYAIFSKVTIEASDDVILGVAGVKADEFISTMSKTTGS 139
Query: 119 RFSIAD----------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161
+ LL + ++I ++ I G+ +
Sbjct: 140 VRPVDGGTAVQVAQDRWLLILSAPKAQQIVETTDAVFTTNELWNRFDIEAGLP-FVSASA 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G P S PI
Sbjct: 199 QNAHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGATSAPFSDEPIE 258
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 259 L-ERSVGENWRSVGA 272
>gi|15837670|ref|NP_298358.1| hypothetical protein XF1068 [Xylella fastidiosa 9a5c]
gi|9106015|gb|AAF83878.1|AE003943_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 305
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 108/275 (39%), Gaps = 18/275 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L + +++ G + F A ++D L SA LTP+G++ F + +
Sbjct: 30 TLFPLPSYEMLRISGADTLSFAHAQFSSDAQDLAIGKWHWSAWLTPKGRVTALFALYRPA 89
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117
E+ +L + + + +L Y R V I ++ +++ T + ++ +D
Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERDLITTGTYDTPVHATGTQAAQLDGI 149
Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
++ + L R T ++ + + + G+ + P
Sbjct: 150 TELDVSGITLPRRLLLVPTAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG +
Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVA 267
Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVH 260
V ALA+ ID +V + +
Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAG 302
>gi|37527429|ref|NP_930773.1| putative global regulator [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81418630|sp|Q7N1C0|YGFZ_PHOLL RecName: Full=tRNA-modifying protein ygfZ
gi|36786864|emb|CAE15929.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 329
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 30/248 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G +LQ +TAD+ L SA +GK+ +
Sbjct: 20 LTLISLDDWGLVTATGPDTEKYLQGQVTADISALATNQHVLSAHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
E +E RS ++ + +L Y + S + + P
Sbjct: 80 GESFAYIE-RRSVLENQLTELKKYAVFSKIALAQDENALLLGVAGKNCRQALSSFFPTLP 138
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
+ ++ T + S ERF + + + ++ + + L I G
Sbjct: 139 DADNAVVAHEATTLLHFSLPSERFLLVTNTATAEQLTEKLQAQLNNSEQWLALDIEAGFP 198
Query: 155 DPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
+ P + L G+ KGCY GQE+V+R ++R ++ + G+
Sbjct: 199 IIDAANSTQ-FIPQATNLQALAGGVCFKKGCYTGQEMVARAKYRGANKRGMYWLAGSASK 257
Query: 213 LPPSGSPI 220
+P +G +
Sbjct: 258 IPMAGDDL 265
>gi|56552584|ref|YP_163423.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544158|gb|AAV90312.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ZM4]
Length = 274
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 29/278 (10%)
Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55
++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F
Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDF 71
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ E + +++ + + D+LI +L Y+LR + IEI P V S N + SSF
Sbjct: 72 ILW-AEGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLNPPENQAISSF 130
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R S + ++ A I + + R+ G+ + + +A L
Sbjct: 131 PDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NG+S TKGCY+GQE +R+ R I +R +I L I D+++
Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDDKCRIYYSDLKL-------- 240
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
A+ + R+ + +T P W K
Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266
>gi|323453978|gb|EGB09849.1| hypothetical protein AURANDRAFT_63050 [Aureococcus anophagefferens]
Length = 307
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 107/302 (35%), Gaps = 42/302 (13%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + V G A + ++ T +V +A L +G++L ++ + +
Sbjct: 2 HRAVLSVRGGDAAKLIHSLTTNNVTAWMESATPGLAAAFLNTKGRVLADAVLWRDGAEDI 61
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSSFIDE 118
+++ S +L+ L YKLRS+V ++ + V + + D
Sbjct: 62 LVDCPASAAKALLRHLKMYKLRSDVKLKARDDLAVATFASPDAAAAAVAAGDVVAGGADP 121
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
R ++ Y R+ G+ + P + +D L +
Sbjct: 122 RTALLG--GRCVAAAGAAPGEPAGAYAARRLALGVAEGAEVVGR---IPLNCNLDALRYV 176
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---------------PPSGSPIL-- 221
+ KGCY+GQE+ +R + R +R+R M + D P +PI+
Sbjct: 177 AFDKGCYLGQELTARAKFRGEVRRRLMPVALQDAASAVLHNAARALPPAEPVPDAPIVGA 236
Query: 222 ---------TDDIEIGTLGVVVGK--KALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+G + V G A+A+ ++D + + ++ P
Sbjct: 237 LPAAGAKLLAAGKAVGEVVAVDGASTVAVAMLKLDFALSGDILDVDVEGTELKASPFVPA 296
Query: 271 WY 272
W+
Sbjct: 297 WW 298
>gi|167521794|ref|XP_001745235.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776193|gb|EDQ89813.1| predicted protein [Monosiga brevicollis MX1]
Length = 364
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 102/295 (34%), Gaps = 55/295 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR-------------------------- 40
+++ + V G A+ FLQ + T D+L +
Sbjct: 61 PHRAVLAVRGPEALTFLQGLTTQDLLPQEPEEPFELAEDDADTADTAADSSTAAATHPTK 120
Query: 41 --GSAILTPQGKILLYFLISKI---EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95
+ L +G+IL L E F E+D L L +KLR+ V +
Sbjct: 121 PLHTMFLHAKGRILCDALAYPTLPTEPRGFYFEVDADMLAPLHKHLRSFKLRTKVSFD-- 178
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ D ++A +++ T D Y LR+ G+ +
Sbjct: 179 -------------ALAPDVIGDPGRTLAALIVPCTL-EPVLSNDDGSIYAYLRLALGLSE 224
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
D + + P +A ++ NG+S KGCY+GQE+ +R + ++RKR + + D
Sbjct: 225 GPQDHIDNKSLPLEANIEHWNGVSFKKGCYLGQELTARTHYSGMLRKRLLPMRIPDVQAA 284
Query: 216 --------SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
+ GT+ V+G + + + R + + G
Sbjct: 285 VRLSHYNGPLKVVTAAGKPAGTVHSVLGDRCIGLVRTAHLTEELVLQPPADAEGA 339
>gi|163802948|ref|ZP_02196835.1| hypothetical protein 1103602000581_AND4_13813 [Vibrio sp. AND4]
gi|159173238|gb|EDP58066.1| hypothetical protein AND4_13813 [Vibrio sp. AND4]
Length = 322
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 26/257 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N S I + G P+LQ +T DV++L + A +GK+ F +
Sbjct: 21 LSISLLDNLSMITMVGDDKKPYLQGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----NSSF 115
+ +L+ +S D + ++ Y + S V IE N VVL E+ + N+
Sbjct: 81 NDGYAMLQ-PKSAIDVELKEIKKYAVFSKVTIE--ESNDVVLGVAGENAEAFISSLNAEI 137
Query: 116 IDERFSIAD---------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTD 159
D R LL T + + + + + I + D
Sbjct: 138 GDVRAIKGGTAVKVAPSRWLLALTAESAQSLVASSQATLTTNELWTRFDIEAALPYVAAD 197
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G G
Sbjct: 198 -AQNDHIPQALNLQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AENLGEG 255
Query: 220 ILTDDIEIGTLGVVVGK 236
+ + +G VG
Sbjct: 256 TIELERSVGENWRSVGA 272
>gi|291618735|ref|YP_003521477.1| YgfZ [Pantoea ananatis LMG 20103]
gi|291153765|gb|ADD78349.1| YgfZ [Pantoea ananatis LMG 20103]
Length = 403
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 102/274 (37%), Gaps = 33/274 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + V G + +LQ +T DV L +A +GK+ +
Sbjct: 94 LTLMSLDAWALVAVVGPDSTSYLQGQLTLDVAALDASHHLPAAHCDAKGKMWSNLRLFHR 153
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E L + R RD+ + +L Y + S V + ++
Sbjct: 154 AEGYAYL-VRRELRDTQLPELKKYAVFSKVTLTADDDVALLGVAGFQARAALANVFDTLP 212
Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + T + ERF S A + ++ +D + L I G
Sbjct: 213 DSTTPVVQQGDTTLLWFAHPAERFLLVTSPAQADALKQTLADDAQFNDSTQWLALDIEAG 272
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + P A M L+ IS KGCY GQE+V+R ++R ++ ++G
Sbjct: 273 IPVIGA-ATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQAS 331
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
P+ + L ++++G G LA ++D
Sbjct: 332 HLPAANDSL--ELQMGERWRRTGTV-LAAVQLDD 362
>gi|316967725|gb|EFV52115.1| aminomethyl transferase family protein [Trichinella spiralis]
Length = 488
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+N+ +KV G + LQ +++ DVL L + S +L QG+I+ L+ + E+
Sbjct: 31 CLLNNRKILKVTGPDRMALLQLVLSNDVLLLHEHRSLYSLMLNKQGRIMYDVLLFEDEDG 90
Query: 64 -TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--NQEHT------FSNSS 114
+ ++E D +I +L Y++R V + V + + NQ H + +
Sbjct: 91 KSTLVECDADVHADVIAFILKYRMRKTVDVVADNSRSVYVYYLPNQAHIREPSIRLPDGT 150
Query: 115 FI--DERFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
I D R + I++ +K Y + R + + + + DF+P T FPH+
Sbjct: 151 LIAKDPRSEYLGFRIITESSLISTISAGCVTLKEYIDYRYSLALGEGSKDFIPGTCFPHE 210
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
G++ +KGCYIGQE+ +RI++ ++RKR M + D + + I
Sbjct: 211 TNARQFKGMNFSKGCYIGQELTARIEYTGVVRKRFMPLLFHVDQLQKLCTVQYNSQVI 268
>gi|293394597|ref|ZP_06638891.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582]
gi|291422906|gb|EFE96141.1| folate-binding protein YgfZ [Serratia odorifera DSM 4582]
Length = 329
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 34/249 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L +GK+ + +
Sbjct: 20 LTLISLEDWALVTLNGPDTVKYLQGQVTADLDQLAADQHVLCGHCDAKGKMWSNLRLFRR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
E LE RS D+ + ++ Y + S V P
Sbjct: 80 GEGFAYLE-RRSLADNQLAEIKKYAVFSKVTFSADNDAVLLGVAGFQARAALAGVFGQLP 138
Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
++ + + T + S ERF +IA+ L + + +D + + L I
Sbjct: 139 DAAHPVAQDGDTTLLHFSLPAERFLLVTTAAIAEQLCAKL--QEQAQLNDSQQWLTLDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + + P + L GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 197 AGYPIIDAP-NSAQLIPQATNLQALGGISFSKGCYTGQEMVARAKFRGANKRAMYWLAGK 255
Query: 211 DDLPPSGSP 219
P+ S
Sbjct: 256 GSRVPAASD 264
>gi|255954107|ref|XP_002567806.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589517|emb|CAP95663.1| Pc21g07660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 438
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/359 (20%), Positives = 127/359 (35%), Gaps = 91/359 (25%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFLIS 58
L+N+ I + G + FLQ +IT ++L +A L QG++L I
Sbjct: 41 RLTNRGLISITGIDSTTFLQGLITQNMLVANDPNRSIRRTGAYTAFLNSQGRVLNDAFIY 100
Query: 59 KIE-------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEH- 108
+ E +++EID+++ L+ L +KLR+ + + + SW
Sbjct: 101 PLPGAEAQGAESGWLVEIDKNQVPVLLKHLKKHKLRAKLKLRALEEGERTIWSSWKNHAE 160
Query: 109 -------------------TFSNSSFIDERFSIADVLLH-------RTWGHNEKIAS--- 139
T + ID R + RT+ +E +
Sbjct: 161 PQRWAAYSLESESPSPFSPTSEIAGCIDTRAPGFGSRIITPGSDGLRTYFPDEAQVAGPE 220
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ +Y RI HG+ + + + + P MD+ GI KGCY+GQE+ R HR
Sbjct: 221 VPLDSYTVRRILHGVAEGQAEVISGSALPLQCNMDMARGIDFRKGCYVGQELTIRTHHRG 280
Query: 199 IIRKRPMII---------------------------TGTDDLPPSGSPILTDDIEIGTLG 231
+ RKR + + +G D+ +G+ + GT
Sbjct: 281 VTRKRLLPVQLYDLGQDAQSAPDTLTYDPSFQLTFPSGEADIVKAGAA-TRRNRSAGTFL 339
Query: 232 VVVGKKALAIARIDKVDHAIKKGMA-----------------LTVHGVRVKASFPHWYK 273
+G LA+ R++ + G A + V V+A P W +
Sbjct: 340 NGIGNIGLALCRLEVMTDIALMGEAPARPHEHHFKLSWAPEVEQPNEVGVRAFVPPWLR 398
>gi|317493828|ref|ZP_07952245.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918155|gb|EFV39497.1| folate-binding protein YgfZ [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 328
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 37/252 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L++ + V G A +LQ +T DV L + +GK+ +
Sbjct: 20 LTIMLLNDWQLVNVTGPDAGKYLQGQLTVDVAALTEQEHTLCGHCDAKGKMWSDLRLFHR 79
Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------ 101
E +++L RS ++ I +L Y + S + I V+
Sbjct: 80 AEGFSYLLR--RSVAENQIVELKKYAVFSKLTIAADTDAVVLGVAGFKAASALAPLFSQL 137
Query: 102 ------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ ++E T + ++R+ S+A+ L+ + G + +D + + EL I
Sbjct: 138 PDSTTPVVAHEETTLLYLAQPEDRYLVITSTSMAEALVEKLQGSAQF--NDSQQWVELDI 195
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + + + P + LNGI KGCY GQE+V+R ++R ++ + G
Sbjct: 196 EAGQPVIDVE-NSGQLIPQATNLQALNGICFKKGCYTGQEMVARAKYRGANKRALYWLQG 254
Query: 210 TDD-LPPSGSPI 220
+ +P +G +
Sbjct: 255 SASRVPQAGEDL 266
>gi|304413501|ref|ZP_07394974.1| aminomethyltransferase folate-binding domain-containing
hypothetical protein [Candidatus Regiella insecticola
LSR1]
gi|304284344|gb|EFL92737.1| aminomethyltransferase folate-binding domain-containing
hypothetical protein [Candidatus Regiella insecticola
LSR1]
Length = 325
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV + + +A P+GK+ +
Sbjct: 20 LTLMTLDDWVLVTITGVDRVNYLQGQVTADVAAMTAEQHIMTAHCDPRGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101
EE +E RS D+ + +L Y + S V I + + GV
Sbjct: 80 EEGLVFIE-RRSVLDNQLKELKKYAVFSKVNISVDTKAVLLGVAGLTARETLATLFSTLP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF-SIADVLLHRTWGH---NEKIASDIKTYHELRINHG 152
+ T + + ERF + D + W + ++ + L I G
Sbjct: 139 NTKHPVVQQGITTLLHFTQPTERFLLVTDAFQAQQWIEILRSRTQFNNSNQWMALDIQAG 198
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + P + L GIS TKGCY GQE V+R Q+R ++ + G +
Sbjct: 199 FP-IIDEKTSALFIPQATNIQTLGGISFTKGCYTGQETVARAQYRGANKRALYWLAGNAN 257
Query: 213 -LPPSGSPI 220
+P G +
Sbjct: 258 RVPLPGDDL 266
>gi|268591706|ref|ZP_06125927.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131]
gi|291312665|gb|EFE53118.1| folate-binding protein YgfZ [Providencia rettgeri DSM 1131]
Length = 327
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 100/275 (36%), Gaps = 45/275 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-E 61
+ L N I + G A +LQ +TAD+ TL A +A P+GK+ + +
Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADIATLKQSHA-LTAHCDPKGKMWSDLRLFHHLD 80
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101
+++L S DS + +L Y + S V E +P +V
Sbjct: 81 GYSYLLRT--SVADSQLAELKKYAVFSKVTFEKKPELKLVGVAGKGAREALATLFTALPD 138
Query: 102 ----LSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ + T + + ERF + + + I + + + L I G
Sbjct: 139 AQNQVVTDDASTILHFALPTERFLVITNEETAQKMAQTLGAIQVNDEQWLALDIEAGFAI 198
Query: 156 PNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ P + L +GIS KGCY GQE+V+R + R ++ + GT
Sbjct: 199 IDQQNSAQH-LPQATNLQALPDGISFKKGCYTGQEMVARAKFRGANKRAMYTLKGTGTTI 257
Query: 215 P---SGSPILTDDI--EIGTLGVVVGKKALAIARI 244
P G D GT+ LA R+
Sbjct: 258 PVVGEGVEWQLGDKWRRTGTV--------LAAIRL 284
>gi|28198265|ref|NP_778579.1| hypothetical protein PD0348 [Xylella fastidiosa Temecula1]
gi|182680902|ref|YP_001829062.1| putative aminomethyl transferase [Xylella fastidiosa M23]
gi|28056335|gb|AAO28228.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631012|gb|ACB91788.1| putative aminomethyl transferase [Xylella fastidiosa M23]
Length = 305
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 108/278 (38%), Gaps = 18/278 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L + +++ G + F A ++D L SA LTP+G++ F + +
Sbjct: 30 TLFPLPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPA 89
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117
E+ +L + + + +L Y R V I ++ +++ T + ++ +D
Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGI 149
Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
++ + L R ++ + + + G+ + P
Sbjct: 150 TELDVSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG +
Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVA 267
Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVHGVR 263
V ALA+ ID +V + + R
Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAGLAR 305
>gi|221135433|ref|ZP_03561736.1| glycine cleavage T protein (aminomethyl transferase) [Glaciecola
sp. HTCC2999]
Length = 296
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L + IK+ G + ++Q +T ++ TL + A +GK+ +F S +D
Sbjct: 10 AHLPHLGIIKITGTDKVKYIQGQVTCNIETLNSERWTFGAHCDFKGKMWSFFQASFW-DD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER--F 120
+L + S + +L Y + S V I + S + + + DE+
Sbjct: 69 ALLLICPKDVIPSALSELKKYGVFSQVEIVDASNEFSFTGSGSDAGEYGQVTCTDEQLVL 128
Query: 121 SIADVLLHRTW------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
S+++ + R N + + L I GI T + P +
Sbjct: 129 SMSNQTITRALHVSRDSSANSDLPDGSAVWQALDIQSGIG-AITSSTSNEYVPQILNLQA 187
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
L+ I KGCY+GQEVV+R ++ ++ I+
Sbjct: 188 LDAIDFKKGCYMGQEVVARTKYLGKNKRAGYILK 221
>gi|315179108|gb|ADT86022.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 326
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 21/246 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L + I + G +LQ +T +V+TL + A +GK+ F +
Sbjct: 26 LTHLDSWGAITMVGADKKNYLQGQVTCNVVTLTADQSIFGAHCDAKGKVWSVFRLFH-HR 84
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDE-- 118
D + + +S ++ + +L Y + S V I P GV+ + Q + S +
Sbjct: 85 DGYAMFQPKSAIEAELRELKKYAIFSKVEIAESPDIALGVIGTQAQAYIDRLSDAQGDVR 144
Query: 119 --------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPS 163
R S LL E++A+ D + I I +
Sbjct: 145 AIDGGTAVRISEQRWLLLVNEQTAEQLATNTDATRVDAALWTRFDIEDAIP-VIERADQN 203
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S
Sbjct: 204 EHIPQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDSDAHEM 263
Query: 224 DIEIGT 229
+ +G
Sbjct: 264 ERSVGE 269
>gi|194365311|ref|YP_002027921.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3]
gi|194348115|gb|ACF51238.1| folate-binding protein YgfZ [Stenotrophomonas maltophilia R551-3]
Length = 291
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 17/268 (6%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + + G A F A + DV LP + SA L+ +G+ L F + ++ ED
Sbjct: 14 RLPGHQLLSLQGPDAAVFAHAQFSGDVTALPLLHWQWSAWLSAKGRTLTVFQLLRLAEDH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117
+L + D++ +L + R V + ++ V ++ S ++
Sbjct: 74 VMLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAQTTGDGWE 133
Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
R G A+ + + + HG+ + P
Sbjct: 134 LDLGSDALPRTLRIGATEAFAAGSEADEATFALAWRQADLRHGLPRL-EESQREVWTPQQ 192
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT
Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAAPAQAGDGVQQDGTALGT 251
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ V G ALA+ ++ D ++ G A+
Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGDAV 279
>gi|255075321|ref|XP_002501335.1| predicted protein [Micromonas sp. RCC299]
gi|226516599|gb|ACO62593.1| predicted protein [Micromonas sp. RCC299]
Length = 370
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/358 (18%), Positives = 117/358 (32%), Gaps = 90/358 (25%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKI 60
V L+++ +++ G+ AIPFLQ I+T DV +L A +A+ QG++ + +
Sbjct: 5 GVSLASRRVLRIAGEEAIPFLQRILTNDVRSLADAGAAPVYAALQNAQGRVRHDLFLHRE 64
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ ++ +D L+ KLRS V ++ V+ E +
Sbjct: 65 FGGALLADLPADGFKDALDALVKLKLRSPVTLDDAGEELRVVVAGGERSDRRDPTADGSA 124
Query: 116 --------------------IDERFSIADVLL-------HRTWGHNEKIASDIKTYHELR 148
D R+ + Y + R
Sbjct: 125 EWVPPVDAESADDDILSFLQPDPRWHGLGLRGVIPAAAAAELLPAGADPEEAEAAYAQWR 184
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-- 206
G+ + + + + P + + LN IS KGCYIGQE+ +R H ++RKR +
Sbjct: 185 YTLGVAEGSEEL--GGLLPLECNLAGLNAISFDKGCYIGQELTARTHHTGVVRKRIVPAL 242
Query: 207 --------------ITGTDDLPP--------------------------SGSPILTD--- 223
+ G P G + D
Sbjct: 243 FARRSQWIAKDSAGVGGRASTPQEKWSGHEVPTRNGDANTNEQQKPRARPGMDVFLDGAP 302
Query: 224 --DIEIGTLGVVVGKKALAIARIDKVDHAIKKG-MALTVHG------VRVKASFPHWY 272
+G + G L + RI+ + A +AL HG V + + P W+
Sbjct: 303 TTGKPVGKVIAARGDVGLILLRIEHLAKADSAEDLALVAHGNDERCHVDARVNIPDWW 360
>gi|212710031|ref|ZP_03318159.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM
30120]
gi|212687238|gb|EEB46766.1| hypothetical protein PROVALCAL_01084 [Providencia alcalifaciens DSM
30120]
Length = 328
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 30/241 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L N I + G A +LQ +TAD+ TL + +A P+GK+ + +
Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADISTLEHAH-TLTAHCDPKGKMWSDLRLFHHLD 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------------- 101
+E RS D+ + +L Y + S V E +P ++
Sbjct: 81 GFSYIE-RRSVADAQLAELKKYAVFSKVTFEKKPELKLLGIAGQGAREALAAIFATLPDH 139
Query: 102 ---LSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + T + ERF I + + + + + L I G+
Sbjct: 140 QNQVVVDGNSTLLHFDLPAERFLIITDEPIAQKITDTLNAPQVSDQQWLALDIEAGLAVI 199
Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ + P A + ++ +GIS KGCY GQE+V+R + R ++ +TGT P
Sbjct: 200 DQENSAQH-LPQAANLQVIPHGISFKKGCYTGQEMVARAKFRGANKRAMYWLTGTGSALP 258
Query: 216 S 216
+
Sbjct: 259 T 259
>gi|322831502|ref|YP_004211529.1| folate-binding protein YgfZ [Rahnella sp. Y9602]
gi|321166703|gb|ADW72402.1| folate-binding protein YgfZ [Rahnella sp. Y9602]
Length = 330
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 97/268 (36%), Gaps = 37/268 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TADV L A +GK+ + K
Sbjct: 20 LTLISLEDWALVTMTGADTVKYLQGQVTADVDALAADQHILCAHCDAKGKMWSNLRLFKR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101
+ +E R+ RD+ + ++ Y + S V + GV
Sbjct: 80 GDGMAFIE-RRNLRDTQLTEIKKYAVFSKVTFTADDDVVLLGVAGFQASAALTGLFSTLP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ E T + S ER+ + G + +D + + L I
Sbjct: 139 TAEQQVVQQDETTLLHFSLPAERYLIVTSPEKARQVVEELGE-QAQRNDSQQWLALDIEA 197
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G +T P + L+GIS TKGCY GQE+V+R ++R ++ + G
Sbjct: 198 GFPVIDTANAVQ-FIPQATNIHALDGISFTKGCYAGQEMVARAKYRGANKRALYWLAGKA 256
Query: 212 ---DLPPSGSPILTDD--IEIGTLGVVV 234
P + + GT+ V
Sbjct: 257 SKVPAPADDLELQLGENWRRTGTVLAAV 284
>gi|15803434|ref|NP_289467.1| putative global regulator [Escherichia coli O157:H7 EDL933]
gi|15833024|ref|NP_311797.1| global regulator [Escherichia coli O157:H7 str. Sakai]
gi|168747622|ref|ZP_02772644.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113]
gi|168753837|ref|ZP_02778844.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401]
gi|168760027|ref|ZP_02785034.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501]
gi|168766892|ref|ZP_02791899.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486]
gi|168775776|ref|ZP_02800783.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196]
gi|168778912|ref|ZP_02803919.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076]
gi|168785745|ref|ZP_02810752.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869]
gi|168800032|ref|ZP_02825039.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508]
gi|195936517|ref|ZP_03081899.1| putative global regulator [Escherichia coli O157:H7 str. EC4024]
gi|208807633|ref|ZP_03249970.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206]
gi|208812486|ref|ZP_03253815.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045]
gi|208818514|ref|ZP_03258834.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042]
gi|209400648|ref|YP_002272373.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115]
gi|217326988|ref|ZP_03443071.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588]
gi|254794848|ref|YP_003079685.1| putative global regulator [Escherichia coli O157:H7 str. TW14359]
gi|261226211|ref|ZP_05940492.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256534|ref|ZP_05949067.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. FRIK966]
gi|81765981|sp|Q8XD41|YGFZ_ECO57 RecName: Full=tRNA-modifying protein ygfZ
gi|226730793|sp|B5YQ91|YGFZ_ECO5E RecName: Full=tRNA-modifying protein ygfZ
gi|12517426|gb|AAG58026.1|AE005520_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363242|dbj|BAB37193.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187768764|gb|EDU32608.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4196]
gi|188017872|gb|EDU55994.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4113]
gi|189003387|gb|EDU72373.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4076]
gi|189358685|gb|EDU77104.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4401]
gi|189363755|gb|EDU82174.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4486]
gi|189369226|gb|EDU87642.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC4501]
gi|189373870|gb|EDU92286.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC869]
gi|189377696|gb|EDU96112.1| tRNA-modifying protein ygfZ [Escherichia coli O157:H7 str. EC508]
gi|208727434|gb|EDZ77035.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4206]
gi|208733763|gb|EDZ82450.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4045]
gi|208738637|gb|EDZ86319.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4042]
gi|209162048|gb|ACI39481.1| tRNA-modifying protein [Escherichia coli O157:H7 str. EC4115]
gi|209760538|gb|ACI78581.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760540|gb|ACI78582.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760542|gb|ACI78583.1| hypothetical protein ECs3770 [Escherichia coli]
gi|209760546|gb|ACI78585.1| hypothetical protein ECs3770 [Escherichia coli]
gi|217319355|gb|EEC27780.1| tRNA-modifying protein [Escherichia coli O157:H7 str. TW14588]
gi|254594248|gb|ACT73609.1| predicted folate-dependent regulatory protein [Escherichia coli
O157:H7 str. TW14359]
gi|320189243|gb|EFW63902.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. EC1212]
gi|320640542|gb|EFX10081.1| putative global regulator [Escherichia coli O157:H7 str. G5101]
gi|320645789|gb|EFX14774.1| putative global regulator [Escherichia coli O157:H- str. 493-89]
gi|320651089|gb|EFX19529.1| putative global regulator [Escherichia coli O157:H- str. H 2687]
gi|320667179|gb|EFX34142.1| putative global regulator [Escherichia coli O157:H7 str. LSU-61]
gi|326339017|gb|EGD62832.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. 1044]
gi|326343101|gb|EGD66869.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli O157:H7 str. 1125]
Length = 326
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYLQGQVTADVSQMTDDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLAELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|300691470|ref|YP_003752465.1| aminomethyl transferase [Ralstonia solanacearum PSI07]
gi|299078530|emb|CBJ51185.1| putative aminomethyl transferase [Ralstonia solanacearum PSI07]
Length = 346
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 105/314 (33%), Gaps = 53/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL + +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101
L+ D+ +L +L + LR+ + +
Sbjct: 93 LQTDKLIAPALTKRLTMFVLRAKARLRPMDEFIAVTVAGPGAADALREAGAVLPESDAAY 152
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
Q T R A W + + + L
Sbjct: 153 AVAQQSATVGQQVGAVIRLPDAGDRPRYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPSITLS-TQDHFVPQMVNLELVGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + ++ G+VV G L ++D +D A G
Sbjct: 272 VNAPT-SAGAEVFSEADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDSVIHLATADGPV 330
Query: 257 LTVHGVRVKASFPH 270
LT+ +
Sbjct: 331 LTLQSLPYAIPVAE 344
>gi|294011519|ref|YP_003544979.1| aminomethyltransferase [Sphingobium japonicum UT26S]
gi|292674849|dbj|BAI96367.1| aminomethyltransferase [Sphingobium japonicum UT26S]
Length = 245
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ L++++ +++ G+ A FLQ ++T DV L R +A+LTPQGK L F++
Sbjct: 1 MTGTTLTDRALLRISGEEAKIFLQGLLTRDVPGLKEGEPRWTALLTPQGKALFDFILWAD 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
D +++ + ++ D+L +L Y+LR V I V + + D R
Sbjct: 61 GGD-VLIDCEGAQADALARRLALYRLRRKVAITRADELAVHWALE-----APGKPFDPRL 114
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L HR W + R++ GI + + I +A L G+
Sbjct: 115 P---QLGHR-WIAPADEGDASAAFRAHRLSLGIFEGVGELGQDQILWLEANAGELGGVDY 170
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII 207
KGCY+GQE +R+ +RN + +R + +
Sbjct: 171 DKGCYVGQENTARMHYRNKVNRRLVAV 197
>gi|238026999|ref|YP_002911230.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
gi|237876193|gb|ACR28526.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
Length = 376
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 91/260 (35%), Gaps = 40/260 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L I+V G A FL + +T D+ L + + +P+G++L FL +
Sbjct: 32 AYMPLPQLGLIEVAGDDAATFLHSQLTNDIEQLDAAGVKLAGYCSPKGRLLASFLAWRTA 91
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
+ +L + + ++ +L + LR+ + V L + + S D
Sbjct: 92 DGVQLL-LSAELQPAVQKRLSMFVLRAKAKLSDAGAEWVALGLAGDVREALSGRFDALPD 150
Query: 119 --------------RFSIADVLLHRTW---------------GHNEKIASDIKTYHELRI 149
R A W +++ + + E+R
Sbjct: 151 GVHTKLDGPAGTLIRLPDAAGRPRYLWIARRAHAEAHAAELDAKLARVSPAVWNWLEIRA 210
Query: 150 NHG-IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMI 206
I P + P D++ I+ KGCY GQE+V+R Q+R I++R
Sbjct: 211 AEPRITQPVVE----QFVPQMVNYDVIGAINFRKGCYPGQEIVARSQYRGTIKRRTALAH 266
Query: 207 ITGTDDLPPSGSPILTDDIE 226
+ G +G +
Sbjct: 267 VAGDTAEVRAGVELFHSRRS 286
>gi|253988688|ref|YP_003040044.1| global regulator [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|211637988|emb|CAR66616.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780138|emb|CAQ83299.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 331
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 34/250 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G +LQ +TAD+ L SA +GK+ +
Sbjct: 20 LTLISLDDWGLVTATGPDTKKYLQGQVTADIFALAANQHVLSAHCDAKGKMWSNLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
E+ +E RS ++ +L Y + S + + +Q N V+L
Sbjct: 80 GENLAYIE-RRSVLETQFTELKKYAVFSKITL-VQDENAVLLGVAGKGCREALNNIFPTL 137
Query: 106 ----------QEHTFSNSSFIDERF-SIADVLLHRTWGHN-EKIASDIKTYHELRINHGI 153
+ T + + ERF I D + ++ + + L I G
Sbjct: 138 PDANNAVVEHETTTLLHFTLPSERFMLITDTATAELLTETLQAQLNNSEQWLALDIAAGF 197
Query: 154 VDPNTDFLPSTIF-PHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D ST F P + L GI KGCY GQE+V+R ++R ++ + G+
Sbjct: 198 P--VIDPANSTQFIPQATNLQALEGGICFKKGCYTGQEMVARAKYRGANKRAMYWLAGSA 255
Query: 212 D-LPPSGSPI 220
+P +G +
Sbjct: 256 AKIPVAGDDL 265
>gi|17546501|ref|NP_519903.1| hypothetical protein RSc1782 [Ralstonia solanacearum GMI1000]
gi|17428799|emb|CAD15484.1| putative glycine cleavage t protein (aminomethyl transferase)
[Ralstonia solanacearum GMI1000]
Length = 346
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 58/314 (18%), Positives = 103/314 (32%), Gaps = 53/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+N + I V G A FL +T V L AR + +P+G++L L+ + + DT +
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLLWR-QADTIV 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------------------------NGVV 101
L+ D+ ++ +L + LR+ + +
Sbjct: 93 LQTDKLVAPAITKRLSMFVLRAKAKLRPMDEFIAITVAGPDAADALRAAGAVLPESDAPY 152
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
Q T R A W + + + L
Sbjct: 153 AVAQQSATVGQQVGAVVRLPDAGNRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLG 212
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ P ++L+ G+ KGCY GQEVV+R Q+R +++R
Sbjct: 213 LQAGVPSITLS-TQEQFVPQMVNLELIGGVDFRKGCYPGQEVVARSQYRGTLKRRMQRAH 271
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDH----AIKKGMA 256
+G+ + + G+VV G L ++D +D A G
Sbjct: 272 VDAPT-SAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTVIHLATADGPV 330
Query: 257 LTVHGVRVKASFPH 270
LT+ +
Sbjct: 331 LTLQRLPYAIPVAE 344
>gi|146162532|ref|XP_001009664.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila]
gi|146146307|gb|EAR89419.2| hypothetical protein TTHERM_00155360 [Tetrahymena thermophila
SB210]
Length = 381
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 63/335 (18%), Positives = 121/335 (36%), Gaps = 74/335 (22%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI---ARGSAILTPQGKILLYFLISKIE- 61
L N+ I + GK A LQ I T D+ + A + L PQG+I+ LI + +
Sbjct: 30 LQNRKIISLSGKDAKSILQGIQTNDMNLFSQQSNKAALYTQFLNPQGRIIFDALIIRPQV 89
Query: 62 ---------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------- 96
ED + ++++ + I + Y LR V +
Sbjct: 90 VIQGELKTKEDEYWIDLESKQGADFIKHIKKYCLRKRVSLADFTNKVNVVTVYSDLIMQQ 149
Query: 97 ----------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--- 143
++ + Q+ ++ + D R S + ++ I+
Sbjct: 150 KEQEGDYWNHLDASIYEKTQDEIYTQVCYTDPRCSNLGMRCIVPSQDQLQLDKTIEEKSQ 209
Query: 144 --YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
Y R+ GI + + P +D LNG+S TKGCY+GQE+ +R H I+R
Sbjct: 210 DIYDAQRLVLGIAQGSE---VADRLPFTVNLDFLNGVSFTKGCYVGQELTARTYHTGIVR 266
Query: 202 KRPMIITGTDD---------LPPSGSPILT---------------DDIEIGTLGVVVGKK 237
+R + D+ + PSG + + E+G + G
Sbjct: 267 RRVVPFVLGDNQKHQLQNNVINPSGVNMYDPNFNESLEGESMLDKNSNEVGKILYNKGNV 326
Query: 238 ALAIAR-IDKVDHAIKKGMALTVHGVRVKASFPHW 271
+A+ + +++ + ++ ++ + + W
Sbjct: 327 GIALVKYLER--GSNTDDLSFQAKNIKGQLIYSSW 359
>gi|71899417|ref|ZP_00681576.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|71730826|gb|EAO32898.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
Length = 305
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 108/278 (38%), Gaps = 18/278 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L + +++ G + F A ++D L SA LTP+G++ F + +
Sbjct: 30 TLFQLPSYEMLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPA 89
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID-- 117
E+ +L + + + +L Y R V I ++ +++ T + ++ +D
Sbjct: 90 ENELLLILPDGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGI 149
Query: 118 ERFSIADVLLHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
++ + L R ++ + + + G+ + P
Sbjct: 150 TELDVSGITLPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIG 208
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D LN S+ KGCY GQE+V+R ++R ++ + P G + + + +IG +
Sbjct: 209 LDGLNAYSIRKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVRSAEGDIGQVA 267
Query: 232 VVVGKKALAIARID------KVDHAIKKGMALTVHGVR 263
V ALA+ ID +V + + R
Sbjct: 268 SVAEGLALAVLPIDTEYGELRVAGTLATPLPFVAGLAR 305
>gi|331684524|ref|ZP_08385116.1| tRNA-modifying protein YgfZ [Escherichia coli H299]
gi|331078139|gb|EGI49345.1| tRNA-modifying protein YgfZ [Escherichia coli H299]
Length = 326
Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLITLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|161506404|ref|YP_001573516.1| putative global regulator [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189041184|sp|A9MRH6|YGFZ_SALAR RecName: Full=tRNA-modifying protein ygfZ
gi|160867751|gb|ABX24374.1| hypothetical protein SARI_04602 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 326
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALATITGVDSEKYIQGQVTADVSQMTEQQHLLTAHCDAKGKMWSNLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS R++ + +L Y + S V+I ++
Sbjct: 79 REGFVWIE-RRSVREAQLTELKKYAVFSKVVIAPDDDRVLLGVAGFQARAALANVFSDLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + T ERF +A V + H E ++ + + L I G
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATVNMLTEKLHGEAELNNSQQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 198 IPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKAS 256
Query: 213 -LPPSGSPI 220
+P +G +
Sbjct: 257 RVPEAGEDL 265
>gi|78485072|ref|YP_390997.1| glycine cleavage T protein (aminomethyl transferase)
[Thiomicrospira crunogena XCL-2]
gi|78363358|gb|ABB41323.1| glycine cleavage system T protein homolog [Thiomicrospira crunogena
XCL-2]
Length = 354
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L++Q+ IKV G+ A FLQ +T D+ + + A+ SA PQGK+L + K + D
Sbjct: 42 TSLAHQALIKVTGEEAFDFLQGQLTNDLKDVSEQQAQLSAYCEPQGKVLAIMTVFKHQ-D 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112
L D S + +++ +L +K+RS V +E + + + + +
Sbjct: 101 ALYLSFDGSLKQTILQRLTMFKMRSKVELEDVSEQMIQVGYAGDFADLDVQRLLSTKIKN 160
Query: 113 ----SSFIDERFSIADVLLHRTWG---------------------HNEKIASDIKTYHEL 147
DE +++D++ + G N ++ + ++ +
Sbjct: 161 IYEVEQVQDE--ALSDIIAIKLPGPYHCYSFFGPVEQAKSLWDTLKNNGEFTNTQDWNLI 218
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I G D + +D LN I+ KGC+ GQEV++R+ +R KR M +
Sbjct: 219 HIVSGQPQ-VNDTTSNEFIAQFLNLDKLNAINFKKGCFPGQEVIARMFYRGKATKRMMRL 277
Query: 208 TGTDDLP-PSGS--PILTDDIEIGTLGVVV-------GKKALAIARIDKVD 248
+ LP G ++ + + V G LA+ + ++
Sbjct: 278 HLEEVLPLEPGETFKLMDEAEKKYKFTTVSSAPDIYEGTVCLAVTTLKPLE 328
>gi|212637154|ref|YP_002313679.1| glycine cleavage T protein [Shewanella piezotolerans WP3]
gi|212558638|gb|ACJ31092.1| Glycine cleavage T protein (aminomethyl transferase) [Shewanella
piezotolerans WP3]
Length = 340
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 104/285 (36%), Gaps = 28/285 (9%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+LS+ + V G+ F+ +T D+ +L + R A P+GK+L F +
Sbjct: 40 HLSHLGLMSVTGEQGRSFIHGQVTTDISSLEAEQWRWGAHCDPKGKMLATFRTFAKGDTL 99
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----------NS 113
F+L + + + +L Y + S + ++L E S
Sbjct: 100 FML-MPKQTLALDLPQLQKYAVFSKAELTDVSEQWLILGVAGEQAASWLTAKFGELNAEL 158
Query: 114 SFIDERFSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPS 163
+ ID I D K+ + D + L G + +
Sbjct: 159 TLIDNGMVIQDNDRFIVVIEQSKVDTANLLADVSLFDATAWQALETLAGYPNIGAAH-SA 217
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS KGCY+GQE ++R+++R ++ I++GT + +L
Sbjct: 218 QFVPQMCNLQAIDGISFNKGCYMGQETIARMKYRGGNKRALYIVSGTVSAVLTDESVLEI 277
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ G G ++ R +V A+ + + AS
Sbjct: 278 ALGEGAGFRRAGTIIESVQREQQVLF-----TAVLANDTPLDASL 317
>gi|157377080|ref|YP_001475680.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
gi|157319454|gb|ABV38552.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
Length = 321
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 86/228 (37%), Gaps = 23/228 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + + G+ F+ +T D+ +L A P+GK+ F I EDT
Sbjct: 24 LTHLGLMSITGEQGRSFIHGQVTTDISSLEKDQWCWGAHCDPKGKMWASFRTFAI-EDTL 82
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFSIA 123
+ + + + +L Y + S + + ++L E N+ F D ++
Sbjct: 83 FMMMPSDTLEVDLPQLAKYAVFSKAELTNVSSDWLILGVAGEQAQEWVNNYFGDIDKAVT 142
Query: 124 DVLLHRTWGH------------NEKIASDIKT-------YHELRINHGIVDPNTDFLPST 164
++ ++ + + I + L I G +
Sbjct: 143 EIPGGALLKDGSRFIIVIEKTPSQALLTSINAPIYECKVWQALEIQSGYPNLAAAH-QGH 201
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P + + GIS KGCY+GQE V+R+++R ++ I++G
Sbjct: 202 FVPQMCNLQAIGGISFEKGCYMGQETVARMKYRGGNKRALYILSGNAS 249
>gi|311106017|ref|YP_003978870.1| glycine cleavage T-protein family protein [Achromobacter
xylosoxidans A8]
gi|310760706|gb|ADP16155.1| glycine cleavage T-protein family protein [Achromobacter
xylosoxidans A8]
Length = 333
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/294 (20%), Positives = 103/294 (35%), Gaps = 43/294 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---- 59
L + G A+ FL +T DV LP AR + T +G++L ++ +
Sbjct: 19 APLDDFLIFAATGADALTFLHGQLTQDVTGLPQDAARLAGYCTAKGRLLATLVMWRGAPG 78
Query: 60 --IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSF 115
+ + + +L+ +L + LR+ + P + GV S + ++
Sbjct: 79 GADDAPQLYGLVRQDLSQALLKRLSMFVLRAKAKLAATPLHVAGVTASAAEAAALEAAAG 138
Query: 116 IDER---------------FSIADVLLHRTWGHNEKIAS------------DIKTYHELR 148
R AD L W +++ + +H
Sbjct: 139 ALPRAPWQRVDLPSGTWIAAPSADARLRWWWIASDEQLAQSAALAGALGLAPAAQWHTAD 198
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ GI T P +DL+ G+S TKGCY GQEVV+R +R +++R T
Sbjct: 199 LAAGIP-WITAATQDIFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRGTVKRRMAYGT 257
Query: 209 GTDDLPP----SGSPI---LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
D +G + IG + G+ L + A+ +G
Sbjct: 258 IADTAVQDQALAGVDVYDATQPGEPIGRVVDAAGEHGLVSVLFETTLAALPEGD 311
>gi|90416426|ref|ZP_01224357.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium
HTCC2207]
gi|90331625|gb|EAS46853.1| hypothetical protein GB2207_04472 [marine gamma proteobacterium
HTCC2207]
Length = 253
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +I++ G + FLQ +T D+ +L + A TP+G+++ F E+ + ILE
Sbjct: 18 RGYIRLSGPDSGKFLQGQVTCDMDSLSPSNSIDGAHCTPKGRMVFLFTAHCDEDGSIILE 77
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
S DS + L Y + I +
Sbjct: 78 AHPSIIDSALANLKKYGVFFKTEITD--------------------------------IS 105
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
++ +N+ SD++ R+ G + + L P +D L I+ KGCY GQ
Sbjct: 106 DSYSNNQTHLSDLE-----RLRAGKAEVVAETL-EMFIPQMLNLDALGYINFKKGCYTGQ 159
Query: 189 EVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD-DIEIGTLGVVV 234
E+++R +R +++R + T+ LP G I + IG + V
Sbjct: 160 EIIARAHYRGAVKRRMHHLALTTESLPSPGDEIKDNQGKSIGNIASAV 207
>gi|218706404|ref|YP_002413923.1| putative global regulator [Escherichia coli UMN026]
gi|293406397|ref|ZP_06650323.1| global regulator [Escherichia coli FVEC1412]
gi|298382133|ref|ZP_06991730.1| ygfZ [Escherichia coli FVEC1302]
gi|300896205|ref|ZP_07114754.1| folate-binding protein YgfZ [Escherichia coli MS 198-1]
gi|226730797|sp|B7N7E2|YGFZ_ECOLU RecName: Full=tRNA-modifying protein ygfZ
gi|218433501|emb|CAR14404.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli UMN026]
gi|291426403|gb|EFE99435.1| global regulator [Escherichia coli FVEC1412]
gi|298277273|gb|EFI18789.1| ygfZ [Escherichia coli FVEC1302]
gi|300359939|gb|EFJ75809.1| folate-binding protein YgfZ [Escherichia coli MS 198-1]
Length = 326
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLITLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|299747549|ref|XP_001837112.2| mitochondrial protein [Coprinopsis cinerea okayama7#130]
gi|298407569|gb|EAU84729.2| mitochondrial protein [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/364 (21%), Positives = 127/364 (34%), Gaps = 101/364 (27%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ ++N++ I V G A FL I++ V K + SA L QG++L I
Sbjct: 15 TLAPITNRALISVSGSDANTFLNGILSTHV-----KPPQFSAFLHAQGRVLYDVFIYTDP 69
Query: 62 ------EDTFILEI---DRSKRD--SLIDKLLFYKLRSNVII-EIQPINGVVLSWN---- 105
++++E S D L+ L + LRS V + + + +W
Sbjct: 70 NPQSTKGPSYLIEYSPPPASNTDVPPLLTYLKRHVLRSKVKVRDASGNYDIWAAWGSELD 129
Query: 106 ------QEHTFSNSSFIDERFSI--------ADVLLHRTWG------------HNEKIAS 139
+E T+++S ++ + +VL R G E +
Sbjct: 130 RKWEQKREWTWASSGAVEPVWGREAPWGSEPGEVLDCRGIGMGRRLLVKQGDKPKEATSH 189
Query: 140 DIK---TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG------------------I 178
DI Y RI HG+ + N D P FP D+ +D++ G +
Sbjct: 190 DIATSDDYLLHRILHGVPEGNVDIPPMHAFPMDSNLDMMGGGTLLQGPDAEVSELIPTSV 249
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------------DLPP---------- 215
KGCY+GQE+ R H+ +IRKR + +D LPP
Sbjct: 250 DFRKGCYVGQELTVRTYHKGVIRKRIHPVILSDLGSSSTTPATLSTPLPPDLDIKPVQQK 309
Query: 216 --SGSPILTDDIEIGT---LGVVVGKKALAIARIDKVDHAIKKGMALTV---HGVRVKAS 267
+ GT L LA+ R++ V + L + G + +
Sbjct: 310 DNAAEGATRTPRPRGTGKLLSTTTHGVGLALLRLEHVAAQQAGNIRLDLSHEGGASLSIT 369
Query: 268 FPHW 271
W
Sbjct: 370 --PW 371
>gi|291284217|ref|YP_003501035.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615]
gi|209760544|gb|ACI78584.1| hypothetical protein ECs3770 [Escherichia coli]
gi|290764090|gb|ADD58051.1| tRNA-modifying protein ygfZ [Escherichia coli O55:H7 str. CB9615]
gi|320656585|gb|EFX24481.1| putative global regulator [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662104|gb|EFX29505.1| putative global regulator [Escherichia coli O55:H7 str. USDA 5905]
Length = 326
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYLQGQVTADVSQMTDDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLAELKKYAVFSKVTIVPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|238899111|ref|YP_002924793.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259710251|sp|C4K7V2|YGFZ_HAMD5 RecName: Full=tRNA-modifying protein ygfZ
gi|229466871|gb|ACQ68645.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 336
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 36/251 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L++ I+V GK + +LQ IT DV L A P+GKIL +
Sbjct: 21 TVILLNDWGLIRVTGKDRVKYLQGQITLDVPLLKENQHILGAHCDPKGKILSTVRLFHYL 80
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PI 97
+ + D L++ L Y + S V I+I P
Sbjct: 81 KGLAFITRKSLLHDELME-LRKYAVFSKVEIDIAESTVLLGIAGDQARKVLKNCFEKLPT 139
Query: 98 NGVVLSWNQEHTFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ +++ + S ER F D L+ + ++ + + + L I
Sbjct: 140 ETEPVVHEDDYSLLHFSSPRERFLLVSQAFKEGDFLIQKL--QDQAVFRSSEQWLALDIE 197
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P A + L GIS TKGCY GQEVV+R ++R + +K +TG
Sbjct: 198 SGFPIIDAKNKTQ-FIPQAANLKALGGISFTKGCYTGQEVVARTEYRGVNKKALYWLTGK 256
Query: 211 D-DLPPSGSPI 220
+P G +
Sbjct: 257 ACRVPDVGEAL 267
>gi|238909848|ref|ZP_04653685.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 326
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 HDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|170058333|ref|XP_001864877.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877457|gb|EDS40840.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 349
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 31 VLTLPYK-IARGSAILTPQGKILLYFLISKIEE---DTFILEIDRSKRDSLIDKLLFYKL 86
+ + + + +L G++L +I ++ D F++E D D+L L +++
Sbjct: 1 MNHFQHGASSIYAMLLNTAGRVLFDTMIYRMSPEQSDHFLVECDAGLVDALRKHLTMFRI 60
Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSS-------FIDERFSIADVLL----------HR 129
R V I + + + + + + D R + + +
Sbjct: 61 RKKVEIAPAECSVWAVFSQENGSLPEQASREGVSIYKDTRLAELGYRIITDKTVSLDTVK 120
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+ ++ +Y E R + GI + +F FP ++ D ++G+S KGCYIGQE
Sbjct: 121 AAFPHGTAYAEGGSYLEHRFSLGIGEGVNNFPQGKCFPLESNCDYMHGVSFHKGCYIGQE 180
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLP----PSGSPILTDDIEI 227
+ +R H ++RKR M +T + +P P + I + D ++
Sbjct: 181 LTARTHHTGVVRKRLMPLTFENPVPNNELPDDAEIKSVDGQV 222
>gi|260771285|ref|ZP_05880212.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972]
gi|260613882|gb|EEX39074.1| glycine cleavage T-protein [Vibrio furnissii CIP 102972]
Length = 323
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 21/246 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L + I + G +LQ +T +V+TL + + A +GK+ F +
Sbjct: 23 LTHLDSWGAITMVGADKKNYLQGQVTCNVVTLTAEQSIFGAHCDAKGKVWSVFRLFH-HR 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDE-- 118
D + + +S ++ + +L Y + S V I P GV+ + Q + S +
Sbjct: 82 DGYAMFQPKSAIEAELRELKKYAIFSKVEIAESPDIALGVIGTQAQAYIDRLSDAQGDVR 141
Query: 119 --------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPS 163
R S LL E++ + D + I I +
Sbjct: 142 AIDGGTAVRISEQRWLLLVNEQTAEQLTTSTDATRVDAALWTRFDIEDAIP-VIERADQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I++G P S S
Sbjct: 201 EHIPQAVNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVSGNVTTPLSDSDAHEM 260
Query: 224 DIEIGT 229
+ +G
Sbjct: 261 ERSVGE 266
>gi|241762172|ref|ZP_04760255.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373422|gb|EER63022.1| folate-binding protein YgfZ [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 274
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 29/278 (10%)
Query: 2 SSVYLSNQSFIKVCG------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55
++ L+++S I++ FLQ ++T DV L SA+LT QGK+L F
Sbjct: 12 NATLLADRSVIRLSPIAEESRSEVFEFLQGLVTQDVFLLEKGAPLWSALLTAQGKVLYDF 71
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ E + +++ + + D+LI +L Y+LR + IEI P V S + SSF
Sbjct: 72 ILW-AEGSSILIDCESAIADNLIRRLTLYRLRRAIRIEIDPAIAVHWSLKPPENQAISSF 130
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
D R S + ++ A I + + R+ G+ + + +A L
Sbjct: 131 SDPRLSELGFRWLQPATDSQPSAEAI--WKKHRLAWGVTEGQAELGLDKTLWLEANAREL 188
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
NG+S TKGCY+GQE +R+ R I +R +I L I D+++
Sbjct: 189 NGVSFTKGCYVGQENTARMNWRQKINRRLAVIKTDHPLDDDKCRIYYSDLKL-------- 240
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
A+ + R+ + +T P W K
Sbjct: 241 --AVMLLRVADWNKLPDDQEVIT----------PEWLK 266
>gi|238896438|ref|YP_002921176.1| putative global regulator [Klebsiella pneumoniae NTUH-K2044]
gi|238548758|dbj|BAH65109.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 327
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 92/249 (36%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ ITADV L +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS RD+ + +L Y + S V I ++
Sbjct: 79 EGGFAWIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152
+ + ERF + + E ++ + + L I G
Sbjct: 138 DAATPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ P + L GIS KGCY GQE+V+R + R ++ ++GT
Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256
Query: 213 -LPPSGSPI 220
+P SG +
Sbjct: 257 RVPESGEDL 265
>gi|327395068|dbj|BAK12490.1| protein YgfZ [Pantoea ananatis AJ13355]
Length = 337
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 33/274 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + V G + +LQ +T DV L +A +GK+ +
Sbjct: 28 LTLMSLDAWALVAVVGPDSTSYLQGQLTLDVAALDASHHLPAAHCDAKGKMWSNLRLFHR 87
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVV---------------- 101
E L + R RD+ + +L Y + S V + + GV
Sbjct: 88 AEGYAYL-VRRELRDTQLPELKKYAVFSKVTLTADDDVTLLGVAGFQARAALANVFDTLP 146
Query: 102 -----LSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + T + ERF S A + ++ +D + L I G
Sbjct: 147 DSTTPVVQQGDTTLLWFAHPAERFLLVTSPAQADALKQTLADDAQFNDSTQWLALDIEAG 206
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I + + P A M L+ IS KGCY GQE+V+R ++R ++ ++G
Sbjct: 207 IPVIDA-ATSAQFIPQAANMQALDAISFKKGCYTGQEMVARAKYRGANKRALYWLSGQAS 265
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
P+ + L ++++G G LA ++D
Sbjct: 266 HLPAANDSL--ELQMGERWRRTGTV-LAAVQLDD 296
>gi|183599845|ref|ZP_02961338.1| hypothetical protein PROSTU_03362 [Providencia stuartii ATCC 25827]
gi|188022117|gb|EDU60157.1| hypothetical protein PROSTU_03362 [Providencia stuartii ATCC 25827]
Length = 329
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 90/264 (34%), Gaps = 34/264 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L N I + G A +LQ +TADV + +A P+GK+ + +
Sbjct: 22 LISLENWGLIHLHGLDAEKYLQGQVTADVSAMTPAQHTLTAHCDPKGKMWSDLRLFHHLD 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQPIN 98
+E S DS + +L Y + S V E P
Sbjct: 82 GFSYIE-RASVLDSQLAELKKYAVFSKVTFEHKQELKLLGVAGKGAREALATIFTTLPDA 140
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
++ + T + + +ERF I + + + + L I G
Sbjct: 141 ENQVTVDGVSTILHYALPNERFLIVTDQATAQKITDSLNAEVVNDEQWLSLEIEAGYA-V 199
Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ P + L GIS KGCY GQE+V+R + R ++ + GT P
Sbjct: 200 IEQASSAQHLPQATNLQALPYGISFKKGCYTGQEMVARAKFRGANKRAMYWLKGTATSVP 259
Query: 216 S---GSPILTDDI--EIGTLGVVV 234
+ G D GT+ V
Sbjct: 260 AVGEGVEWQLGDKWRRTGTVLAAV 283
>gi|148549504|ref|YP_001269606.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida F1]
gi|148513562|gb|ABQ80422.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida F1]
Length = 313
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 97/279 (34%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112
++L + D+ + L Y + S + + T
Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDTALQALGLVVPAAAG 126
Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ ++ AD R + + +I GI
Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPAADAEPVRQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G
Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245
Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250
+ I + +G + + G A LA+ + V+
Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGAGCELLAVLSAEAVEDG 284
>gi|152971844|ref|YP_001336953.1| putative global regulator [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|150956693|gb|ABR78723.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 329
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ ITADV L +A +GK+ + +
Sbjct: 21 LTLMTLDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRR 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS RD+ + +L Y + S V I ++
Sbjct: 81 EGGFAWIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 139
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152
+ + ERF + + E ++ + + L I G
Sbjct: 140 DAATPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAG 199
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ P + L GIS KGCY GQE+V+R + R ++ ++GT
Sbjct: 200 LPVIDS-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTAS 258
Query: 213 -LPPSGSPI 220
+P +G +
Sbjct: 259 RVPEAGEDL 267
>gi|331664472|ref|ZP_08365378.1| tRNA-modifying protein YgfZ [Escherichia coli TA143]
gi|331058403|gb|EGI30384.1| tRNA-modifying protein YgfZ [Escherichia coli TA143]
Length = 326
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 107/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|156932650|ref|YP_001436566.1| putative global regulator [Cronobacter sakazakii ATCC BAA-894]
gi|166979586|sp|A7MR73|YGFZ_ENTS8 RecName: Full=tRNA-modifying protein ygfZ
gi|156530904|gb|ABU75730.1| hypothetical protein ESA_00433 [Cronobacter sakazakii ATCC BAA-894]
Length = 329
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 101/276 (36%), Gaps = 37/276 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV L A +GK+ + +
Sbjct: 19 LTLISLEDWALATITGPDSEKYLQGQVTADVTELGENQHLLVAHCDAKGKMWSNLRLFRH 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN--SSFI 116
+ +E RS RD+ + ++ Y + S V I + V + +N ++
Sbjct: 79 GDGFAWIE-RRSVRDTQLAEMKKYAVFSKVTIAPNDDAVLLGVAGFQARAALANHFATLP 137
Query: 117 DERFSI----ADVLLHRTWG--------------------HNEKIASDIKTYHELRINHG 152
DE+ A LL H E + + L I G
Sbjct: 138 DEQNPRVVDGATTLLWFGLPAERFMVITDAETASQLSDKLHGEAQLNASAQWLALDIEAG 197
Query: 153 IVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 198 FP--VIDAPNSNQFIPQATNIQALGGISFKKGCYAGQEMVARAKFRGANKRSLWYLAGHG 255
Query: 212 D-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+P G I ++++G G LA ++D
Sbjct: 256 SRVPQPGEDI---EMQMGENWRRTGTV-LAAVQLDD 287
>gi|74313456|ref|YP_311875.1| putative global regulator [Shigella sonnei Ss046]
gi|118577997|sp|Q3YXX2|YGFZ_SHISS RecName: Full=tRNA-modifying protein ygfZ
gi|73856933|gb|AAZ89640.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323167896|gb|EFZ53586.1| tRNA-modifying protein ygfZ [Shigella sonnei 53G]
Length = 326
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I + ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T + ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEYPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|194431674|ref|ZP_03063965.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012]
gi|194420030|gb|EDX36108.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1012]
gi|320182198|gb|EFW57101.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella boydii ATCC 9905]
gi|332086823|gb|EGI91959.1| tRNA-modifying protein ygfZ [Shigella boydii 5216-82]
Length = 326
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFGHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|317049384|ref|YP_004117032.1| folate-binding protein YgfZ [Pantoea sp. At-9b]
gi|316951001|gb|ADU70476.1| folate-binding protein YgfZ [Pantoea sp. At-9b]
Length = 327
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 94/267 (35%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + V GK + +LQ +T DV L R +A +GK+ +
Sbjct: 19 LTLMSLDEWALVAVQGKDSTSYLQGQLTLDVAALDAAQHRPAAHCDAKGKMWSSLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E L + R+ RD+ + +L Y + + V I ++
Sbjct: 79 GEGYGYL-VRRNLRDTQLTELKKYAVFAKVTIAADDDAVLLGVAGFQARTALAGLFPLLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN----EKIASDIKTYHELRINHG 152
+ T + ERF + + + +D + L I G
Sbjct: 138 DATTPVVQQDNTTLLWFAQPAERFLLVTTRDQAEALKDKLTGDAQFNDSMQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I ++ + + P + L+ IS KGCY GQE+V+R + R ++ + G
Sbjct: 198 IPVIDS-ATSAQLIPQATNLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGQAS 256
Query: 213 LPPSGS---PILTDD--IEIGTLGVVV 234
P + D GT+ V
Sbjct: 257 HLPQADGSLELQMGDRWRRTGTVLTAV 283
>gi|28899357|ref|NP_798962.1| hypothetical protein VP2583 [Vibrio parahaemolyticus RIMD 2210633]
gi|260362198|ref|ZP_05775185.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030]
gi|260878954|ref|ZP_05891309.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034]
gi|260897479|ref|ZP_05905975.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466]
gi|260899629|ref|ZP_05908024.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037]
gi|81726929|sp|Q87LM8|YGFZ_VIBPA RecName: Full=tRNA-modifying protein ygfZ
gi|28807593|dbj|BAC60846.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308088017|gb|EFO37712.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus Peru-466]
gi|308090453|gb|EFO40148.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AN-5034]
gi|308108226|gb|EFO45766.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus AQ4037]
gi|308113962|gb|EFO51502.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus K5030]
Length = 322
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 98/272 (36%), Gaps = 34/272 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L + I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +++ +S + + ++ Y + S V IE N V+L + + S ++E
Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137
Query: 121 S---------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ + +++ + + + I + +
Sbjct: 138 GDVRIINGGTAVKVEANRWLLVVTEEAAQALIENSDATLTTRELWTRFDIESALP-FVSA 196
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G +
Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256
Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242
I + +GTL +A+ +
Sbjct: 257 IELERSVGDNWRSVGTLLTHYQFSDNQAMGLI 288
>gi|145300371|ref|YP_001143212.1| aminomethyltransferase related to GcvT [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853143|gb|ABO91464.1| predicted aminomethyltransferase related to GcvT [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 303
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 14/227 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L++ + + G + +LQ +T DV L + +GK+ F + +
Sbjct: 13 TLFSLTDLAITSLTGADRVKYLQGQVTCDVNALQPGQSTLGGHCDAKGKLWSDFRLLYLS 72
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSS 114
D ++ S + +L + + + V I V ++ S +
Sbjct: 73 -DRLLMLTKPSVLARQLPELKKFAVFAKVEIAENHGQAVGVAGQGTDEWMEARFAVSQTG 131
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKT-----YHELRINHGIVDPNTDFLPSTIFPHD 169
ID+ ++ + + D+ + L I GI P
Sbjct: 132 LIDDGMAVQIEADRWLLVSEQPLTIDLPAGSESLWWGLDIKAGIPHLEA-VHQGEYIPQM 190
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ L+GIS TKGCY+GQE V+R ++R + ++ GT P +
Sbjct: 191 LNLQALDGISFTKGCYMGQETVARAKYRGANNRALFVLAGTASEPVA 237
>gi|146312956|ref|YP_001178030.1| putative global regulator [Enterobacter sp. 638]
gi|166979585|sp|A4WE49|YGFZ_ENT38 RecName: Full=tRNA-modifying protein ygfZ
gi|145319832|gb|ABP61979.1| conserved hypothetical protein [Enterobacter sp. 638]
Length = 326
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 103/275 (37%), Gaps = 35/275 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV L A P+GK+ + +
Sbjct: 19 LTLISLDDWALATISGADSEKYLQGQVTADVAQLGEHQHLLVAHCDPKGKMWSNLRLFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN------ 112
+ D F RS RD+ + +L Y + S V I N + V + N
Sbjct: 79 Q-DGFACIERRSLRDAQLTELKKYAVFSKVTIVADDENVLLGVAGFQARAALKNLFSELP 137
Query: 113 ----------------SSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
DERF +A E ++ + + L I G
Sbjct: 138 DADKPLINDGVTSLLWFEHPDERFLLVTDVATADRVTEALRGEAQFNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 198 LPIIDA-VNSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGNAS 256
Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+P +G + ++++G G LA ++D
Sbjct: 257 RVPEAGEDL---ELKMGENWRRTGTV-LAAVQLDD 287
>gi|153835742|ref|ZP_01988409.1| protein YgfZ [Vibrio harveyi HY01]
gi|148867601|gb|EDL66905.1| protein YgfZ [Vibrio harveyi HY01]
Length = 322
Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 91/255 (35%), Gaps = 22/255 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L N I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSVSLLDNLGMITMVGDDKKSYLHGQVTCDVVSLEKGQSMLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
D + + +S + + ++ Y + S V IE + ++ F ++ D
Sbjct: 81 N-DGYAMVQPKSAIEVELKEIKKYAVFSKVAIEESSDVVLGVAGENADAFISTLNADSGD 139
Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFL 161
+ + LL T + + + + I + D
Sbjct: 140 VRTVEGGTAVKVASNRWLLALTAEAAQSLVEGSQATLTTHELWTRFDIEAALPYVAAD-A 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G G +
Sbjct: 199 QNEHIPQALNVQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGAT-AETLGEGAI 257
Query: 222 TDDIEIGTLGVVVGK 236
+ +G VG
Sbjct: 258 ELERSVGENWRSVGA 272
>gi|296104560|ref|YP_003614706.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059019|gb|ADF63757.1| putative global regulator [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 326
Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 30/247 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G A +LQ +TADV + +A P+GK+ + +
Sbjct: 19 LTLISLDDWALATLVGADAEKYLQGQVTADVSQMTEHQHLLAAHCDPKGKMWSNLRLFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN------ 112
++ +E RS RD + +L Y + S V I + + V + N
Sbjct: 79 QDGFAFIE-RRSLRDDQLKELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFNELP 137
Query: 113 -----------SSFIDERFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152
+S + LL E++ + + + L I G
Sbjct: 138 DAEKQLVSEGETSILWFEHPAERFLLVTDAATAERVTEALRGEAQFNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 198 LPVIDA-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAS 256
Query: 213 LPPSGSP 219
P
Sbjct: 257 RVPEAGE 263
>gi|62181559|ref|YP_217976.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224584838|ref|YP_002638636.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|75481001|sp|Q57K67|YGFZ_SALCH RecName: Full=tRNA-modifying protein ygfZ
gi|254814151|sp|C0PY21|YGFZ_SALPC RecName: Full=tRNA-modifying protein ygfZ
gi|62129192|gb|AAX66895.1| putative aminomethyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224469365|gb|ACN47195.1| hypothetical protein SPC_3108 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322716040|gb|EFZ07611.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 326
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS ++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPAIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|198283240|ref|YP_002219561.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667779|ref|YP_002425823.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247761|gb|ACH83354.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519992|gb|ACK80578.1| folate-binding protein YgfZ [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 321
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 112/309 (36%), Gaps = 47/309 (15%)
Query: 1 MSSVYL-SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
++ V L + I G A FLQ + D+ L + S+ T +G+++ F + +
Sbjct: 6 ITFVPLHTELGLIHASGVDAEKFLQGQFSNDLRALASGHGQWSSYSTAKGRMIANFYVQR 65
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------------------GV 100
D F L + D++I++L +++ + + I+ G+
Sbjct: 66 DGSD-FWLSLADDMADTVIERLRKFRMMAKLEIKRGEPEFTLLAVHGNGAGELLGRALGI 124
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147
L + + I R A+ ++ + + +
Sbjct: 125 ALGKSGNSGVVHDDAIITRLPWAEAEAFLIILPASRVEALSAKLGAAGARSGAAEDWRLW 184
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I G+ + I P + +++L GI+ KGCY GQE+V+R + ++ + +
Sbjct: 185 AIQAGVGMISR-ATTEKIIPQELNLEVLGGINFKKGCYPGQEIVARSHYLGKLKNQTYRV 243
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTV 259
+ L +G I + ++G+V+ G ALA+ R ++ G
Sbjct: 244 AASAPL-QAGEEIFCTSMGAQSIGIVINAAQDPLGGFAALAVLRAANAGESLMAGAP--- 299
Query: 260 HGVRVKASF 268
G +
Sbjct: 300 GGTPLSLGK 308
>gi|16761829|ref|NP_457446.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29143316|ref|NP_806658.1| global regulator [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|168236108|ref|ZP_02661166.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737927|ref|YP_002115997.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|213425828|ref|ZP_03358578.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213582635|ref|ZP_03364461.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213646969|ref|ZP_03377022.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823826|ref|ZP_06543438.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|81513026|sp|Q8Z3X4|YGFZ_SALTI RecName: Full=tRNA-modifying protein ygfZ
gi|226730809|sp|B4TUR5|YGFZ_SALSV RecName: Full=tRNA-modifying protein ygfZ
gi|25512796|pir||AF0872 conserved hypothetical protein STY3204 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504131|emb|CAD02878.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138950|gb|AAO70518.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194713429|gb|ACF92650.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197290686|gb|EDY30040.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 326
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|261345600|ref|ZP_05973244.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541]
gi|282566080|gb|EFB71615.1| folate-binding protein YgfZ [Providencia rustigianii DSM 4541]
Length = 327
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 37/271 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L N I + G A +LQ +TAD+ TL + +A P+GK+ +
Sbjct: 22 LISLENWELIHLHGADAEKYLQGQVTADISTLSHAH-TLTAHCDPKGKMWSDLRLFHHLN 80
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------------- 101
+E RS D + +L Y + S V E +P ++
Sbjct: 81 GYSYIE-RRSVSDIQLAELKKYAVFSKVTFEKKPELKLLGVAGQGARQALEAVFNSLPDD 139
Query: 102 ---LSWNQEHTFSNSSFIDERFSI--ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + E T + + ERF + D + + I + L I G
Sbjct: 140 QNQVVVDGETTILHFALPAERFLLITNDATALKISDTLKAIHVADSQWLALEIAAGFAVI 199
Query: 157 NTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ + P A + L +GIS KGCY GQE+V+R + R ++ + GT P
Sbjct: 200 DQE-NSGQHLPQAANLQALPHGISFQKGCYTGQEMVARAKFRGANKRAMYWLIGTGSTLP 258
Query: 216 SGSPILTDDIE--IGTLGVVVGKKALAIARI 244
++ + +E +G G LA R+
Sbjct: 259 ----VIGEGVEWQLGENWRRTGTV-LAAVRL 284
>gi|254037943|ref|ZP_04872001.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43]
gi|226839567|gb|EEH71588.1| tRNA-modifying protein YgfZ [Escherichia sp. 1_1_43]
Length = 326
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|218701607|ref|YP_002409236.1| putative global regulator [Escherichia coli IAI39]
gi|226730794|sp|B7NW39|YGFZ_ECO7I RecName: Full=tRNA-modifying protein ygfZ
gi|218371593|emb|CAR19432.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli IAI39]
Length = 326
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANIFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|329296870|ref|ZP_08254206.1| putative global regulator [Plautia stali symbiont]
Length = 327
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 99/269 (36%), Gaps = 39/269 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + V GK + +LQ +T DV L R + +GK+ +
Sbjct: 19 LTLMSLDEWALVSVQGKDSTSYLQGQLTLDVAALDAAQHRPAGHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E + + R+ R+ + +L Y + + V I ++
Sbjct: 79 GEGYAYV-VRRNLREQQVTELKKYAVFAKVTIAADDDAVLLGAAGFQARAALANVFATLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T + ERF + A+ L + G E +D + L I
Sbjct: 138 DATTPVVQQDDTTLLWFAEPAERFLLVTTPAQAEALQQKLAG--EAQLNDSTQWLALDIA 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ ++ + + P + L+ IS KGCY GQE+V+R + R ++ + G+
Sbjct: 196 AGVPVIDS-ATTAQLIPQAINLQALDAISFKKGCYTGQEMVARAKFRGTNKRALYWLAGS 254
Query: 211 DDLPPSGS---PILTDDI--EIGTLGVVV 234
P + + D GT+ V
Sbjct: 255 ASKVPDAASSLELQMGDKWRRTGTVLSGV 283
>gi|332289497|ref|YP_004420349.1| putative global regulator [Gallibacterium anatis UMN179]
gi|330432393|gb|AEC17452.1| putative global regulator [Gallibacterium anatis UMN179]
Length = 296
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L+N I++ G + FLQ +T DV+ + + +A P+GK++ F + K
Sbjct: 11 AAKLNNYCVIEINGVDSQTFLQGQLTCDVVNMSANSSTLAAHCDPKGKVISLFRLIKFSA 70
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFS 121
+ F D S + +L Y + S V + ++ S E N D E +
Sbjct: 71 EQFWFVFDNSLLPLALQQLKKYAVFSKVTFVEKNLHIATFS---EDCLPNDLTTDAEVTT 127
Query: 122 IADVLLHRTWGHN----------EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
AD L R N + + + + L I +G T P
Sbjct: 128 TADKTLVRVNAENDFYLLFSESEQAQSEQAEQWKWLNIVNGEP-LFTAVAQGEFIPQALN 186
Query: 172 MDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPI 220
+ L IS TKGCYIGQE ++R ++R + + + + GS +
Sbjct: 187 LQHLEQAISFTKGCYIGQETIARAKYRGANKLAMFTLVADEIEAVEIGSSV 237
>gi|293416151|ref|ZP_06658791.1| global regulator [Escherichia coli B185]
gi|284922846|emb|CBG35935.1| tRNA-modifying protein [Escherichia coli 042]
gi|291432340|gb|EFF05322.1| global regulator [Escherichia coli B185]
Length = 326
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|227112625|ref|ZP_03826281.1| putative global regulator [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 333
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TADV LP A +GK+ +
Sbjct: 26 TLISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHILCAHCDAKGKMWSNLRLFHHG 85
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101
E +E R+ RD+ +++L Y + S I ++
Sbjct: 86 EGFAFIE-RRNLRDAQLNELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPD 144
Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ ++ T + + ERF L G + +D + + L I G
Sbjct: 145 AEHPVVQHEGATLLHFAHPAERFLLVLSPEHGASLLEQLGDKVSL-NDSRQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211
++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G +
Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262
Query: 212 DLPPSGSPI 220
+P +G +
Sbjct: 263 KVPQAGDDL 271
>gi|260599238|ref|YP_003211809.1| putative global regulator [Cronobacter turicensis z3032]
gi|260218415|emb|CBA33507.1| tRNA-modifying protein ygfZ [Cronobacter turicensis z3032]
Length = 329
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 102/278 (36%), Gaps = 41/278 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ +TADV L A +GK+ + +
Sbjct: 19 LTLISLEDWALATITGPDSEKYLQGQVTADVTELGENQHLLVAHCDAKGKMWSNLRLFRH 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSW------------- 104
++ +E RS RD+ + ++ Y + S V I + GV
Sbjct: 79 DDGFAWIE-RRSVRDTQLAEMKKYAVFSKVAIAPDDNAVLLGVAGFQARAALANHFTTLP 137
Query: 105 --------NQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A L + G + AS + L I
Sbjct: 138 DEQNPRVVDGATTLLWFGLPAERFMVITDADTASQLTEQLRGEAQLNAS--AQWLALDIE 195
Query: 151 HGIVDPNTDFL-PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G D + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGFP--VIDAPNSNQFIPQATNIQALGGISFKKGCYAGQEMVARAKFRGANKRALWYLAG 253
Query: 210 TDD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+P G I ++++G G LA ++D
Sbjct: 254 HGSRVPQPGEDI---EMQMGENWRRTGTV-LAAVQLDD 287
>gi|322613447|gb|EFY10388.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621039|gb|EFY17897.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624103|gb|EFY20937.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628158|gb|EFY24947.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633277|gb|EFY30019.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636145|gb|EFY32853.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639483|gb|EFY36171.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647584|gb|EFY44073.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648768|gb|EFY45215.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653823|gb|EFY50149.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657929|gb|EFY54197.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664032|gb|EFY60231.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668957|gb|EFY65108.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673049|gb|EFY69156.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322677960|gb|EFY74023.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681136|gb|EFY77169.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687934|gb|EFY83901.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194870|gb|EFZ80057.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196621|gb|EFZ81769.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202679|gb|EFZ87719.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207834|gb|EFZ92780.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212614|gb|EFZ97431.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214903|gb|EFZ99651.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222634|gb|EGA06999.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225087|gb|EGA09339.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230609|gb|EGA14727.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235040|gb|EGA19126.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239079|gb|EGA23129.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244563|gb|EGA28569.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247178|gb|EGA31144.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253339|gb|EGA37168.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256354|gb|EGA40090.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262470|gb|EGA46026.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267434|gb|EGA50918.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269162|gb|EGA52617.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 326
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|284008423|emb|CBA74869.1| aminomethyltransferase [Arsenophonus nasoniae]
Length = 328
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 36/271 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L++ SFI G A +LQ +TAD+ TL + +A +GK+ +
Sbjct: 20 LTLMTLNDWSFITATGVDAEKYLQGQLTADITTLTPQQHILTAHCDAKGKMWSTLRLFHY 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGV----------------- 100
E + + S + +L Y + S + + QP + GV
Sbjct: 80 NEGFGYI-LRTSVAAKQLSELKKYAVFSQITLSQQPNIMLLGVAGQGARDRLNNHFSQLP 138
Query: 101 ----VLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ ++ T + S ERF I D + D + + I GI +
Sbjct: 139 DQEKAVIHLEQTTLLHFSVPSERFLIVTDSATATELTKHFPQHGDSQQWLAFDIAAGIAN 198
Query: 156 PNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDL 213
+ + P + L IS KGCY GQE V+R ++R ++ + GT + L
Sbjct: 199 IDVE-NSEQFIPQAVNLQALPASISFHKGCYSGQETVARAKYRGANKRAMFWLAGTANTL 257
Query: 214 PPSGSPILTDDIEIG----TLGVVVGKKALA 240
P +G I + +IG G V+ LA
Sbjct: 258 PKTGEAI---EWKIGDNWRRTGTVLAAVNLA 285
>gi|170683930|ref|YP_001745051.1| putative global regulator [Escherichia coli SMS-3-5]
gi|226730799|sp|B1LD99|YGFZ_ECOSM RecName: Full=tRNA-modifying protein ygfZ
gi|170521648|gb|ACB19826.1| tRNA-modifying protein ygfZ [Escherichia coli SMS-3-5]
Length = 326
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|170018856|ref|YP_001723810.1| putative global regulator [Escherichia coli ATCC 8739]
gi|189041183|sp|B1ITA4|YGFZ_ECOLC RecName: Full=tRNA-modifying protein ygfZ
gi|169753784|gb|ACA76483.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
Length = 326
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSVLP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVIREDATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|209920352|ref|YP_002294436.1| putative global regulator [Escherichia coli SE11]
gi|260857021|ref|YP_003230912.1| putative folate-dependent regulatory protein [Escherichia coli
O26:H11 str. 11368]
gi|260869575|ref|YP_003235977.1| putative folate-dependent regulatory protein [Escherichia coli
O111:H- str. 11128]
gi|226730798|sp|B6I731|YGFZ_ECOSE RecName: Full=tRNA-modifying protein ygfZ
gi|209913611|dbj|BAG78685.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257755670|dbj|BAI27172.1| predicted folate-dependent regulatory protein [Escherichia coli
O26:H11 str. 11368]
gi|257765931|dbj|BAI37426.1| predicted folate-dependent regulatory protein [Escherichia coli
O111:H- str. 11128]
gi|323173896|gb|EFZ59525.1| tRNA-modifying protein ygfZ [Escherichia coli LT-68]
gi|323180343|gb|EFZ65895.1| tRNA-modifying protein ygfZ [Escherichia coli 1180]
gi|323946616|gb|EGB42639.1| folate-binding protein YgfZ [Escherichia coli H120]
gi|324119939|gb|EGC13818.1| folate-binding protein YgfZ [Escherichia coli E1167]
Length = 326
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|110643047|ref|YP_670777.1| putative global regulator [Escherichia coli 536]
gi|191173236|ref|ZP_03034767.1| tRNA-modifying protein ygfZ [Escherichia coli F11]
gi|118577993|sp|Q0TDV3|YGFZ_ECOL5 RecName: Full=tRNA-modifying protein ygfZ
gi|110344639|gb|ABG70876.1| hypothetical protein ECP_2892 [Escherichia coli 536]
gi|190906487|gb|EDV66095.1| tRNA-modifying protein ygfZ [Escherichia coli F11]
gi|281179903|dbj|BAI56233.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 326
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|187731975|ref|YP_001881668.1| putative global regulator [Shigella boydii CDC 3083-94]
gi|226730810|sp|B2U0R5|YGFZ_SHIB3 RecName: Full=tRNA-modifying protein ygfZ
gi|187428967|gb|ACD08241.1| tRNA-modifying protein [Shigella boydii CDC 3083-94]
gi|320175914|gb|EFW50992.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella dysenteriae CDC 74-1112]
Length = 326
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|213619118|ref|ZP_03372944.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 310
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 3 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 62
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 63 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 121
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 122 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 179
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 180 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 238
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 239 ASRVPEAGEDL 249
>gi|153840079|ref|ZP_01992746.1| protein YgfZ [Vibrio parahaemolyticus AQ3810]
gi|149746325|gb|EDM57384.1| protein YgfZ [Vibrio parahaemolyticus AQ3810]
Length = 322
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 99/272 (36%), Gaps = 34/272 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L + I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER- 119
+ +++ +S + + ++ Y + S V IE N V+L + + S ++E
Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137
Query: 120 --------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ + +++ + + + + I + +
Sbjct: 138 GDVRVINGGTAVKVEANRWLLIVTEEAAQALIENSDAMLTTHELWTRFDIESALP-FVSA 196
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G +
Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256
Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242
I + +GTL +A+ +
Sbjct: 257 IELERSVGDNWRSVGTLLAHYQFSDNQAMGLI 288
>gi|50550805|ref|XP_502875.1| YALI0D15774p [Yarrowia lipolytica]
gi|74634509|sp|Q6C8Y7|CAF17_YARLI RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49648743|emb|CAG81063.1| YALI0D15774p [Yarrowia lipolytica]
Length = 479
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 106/272 (38%), Gaps = 57/272 (20%)
Query: 4 VYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISKI 60
V L+N ++ + V G+ A L + T V + A L +G+++ +
Sbjct: 41 VDLTNSKTMVHVSGRDAAKLLNGLFTLPVSSGAATPFSGVFGAFLNGKGRVITDAFLYTT 100
Query: 61 -----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---- 111
E+ +F++E D++ D L+ L +++R+ V +E + WN++ T
Sbjct: 101 SNHTEEDQSFVIEFDKAVEDELLLHLKRHRIRAKVKMEKLTDYECIFIWNRDATPDYWRR 160
Query: 112 ----NSSF------------------------------------IDERFSIADVLLHRTW 131
+S F +D+R+ + + +
Sbjct: 161 ENECDSGFFQSLCEVAWSVAEVGETSEVEEKNGEPAQKPLYGLLVDDRYPLLGIRMILPA 220
Query: 132 GHN-----EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ ++++ Y+ LR G + + + P+ P ++ +D +NG+ +GCY+
Sbjct: 221 KTSTTYFSAIPSANLTQYNMLRYIRGTPEGSREIPPNKALPMESDLDYMNGLDFNRGCYV 280
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
GQE+ R H ++RKR + + G
Sbjct: 281 GQELTIRTHHTGVVRKRIVPFQLYQEGQEPGE 312
>gi|82545479|ref|YP_409426.1| global regulator [Shigella boydii Sb227]
gi|118577995|sp|Q31WG0|YGFZ_SHIBS RecName: Full=tRNA-modifying protein ygfZ
gi|81246890|gb|ABB67598.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320184557|gb|EFW59358.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Shigella flexneri CDC 796-83]
gi|332090898|gb|EGI95989.1| tRNA-modifying protein ygfZ [Shigella boydii 3594-74]
Length = 326
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAADDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|16130800|ref|NP_417374.1| Hda suppressor; also involved in methylthio modification at
2-methylthio-6-iodeadenosine in tRNA [Escherichia coli
str. K-12 substr. MG1655]
gi|24114152|ref|NP_708662.1| putative global regulator [Shigella flexneri 2a str. 301]
gi|30064210|ref|NP_838381.1| putative global regulator [Shigella flexneri 2a str. 2457T]
gi|89109677|ref|AP_003457.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K-12 substr. W3110]
gi|110806801|ref|YP_690321.1| putative global regulator [Shigella flexneri 5 str. 8401]
gi|157156395|ref|YP_001464236.1| putative global regulator [Escherichia coli E24377A]
gi|157162358|ref|YP_001459676.1| putative global regulator [Escherichia coli HS]
gi|170082459|ref|YP_001731779.1| folate-dependent regulatory protein [Escherichia coli str. K-12
substr. DH10B]
gi|188494932|ref|ZP_03002202.1| tRNA-modifying protein [Escherichia coli 53638]
gi|191165963|ref|ZP_03027799.1| tRNA-modifying protein ygfZ [Escherichia coli B7A]
gi|193063561|ref|ZP_03044650.1| tRNA-modifying protein ygfZ [Escherichia coli E22]
gi|193070568|ref|ZP_03051507.1| tRNA-modifying protein ygfZ [Escherichia coli E110019]
gi|194426392|ref|ZP_03058947.1| tRNA-modifying protein ygfZ [Escherichia coli B171]
gi|194436847|ref|ZP_03068947.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1]
gi|218555446|ref|YP_002388359.1| putative global regulator [Escherichia coli IAI1]
gi|218696493|ref|YP_002404160.1| putative global regulator [Escherichia coli 55989]
gi|238902023|ref|YP_002927819.1| putative folate-dependent regulatory protein [Escherichia coli
BW2952]
gi|253772261|ref|YP_003035092.1| global regulator [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162810|ref|YP_003045918.1| putative global regulator [Escherichia coli B str. REL606]
gi|256019303|ref|ZP_05433168.1| putative global regulator [Shigella sp. D9]
gi|256024591|ref|ZP_05438456.1| putative global regulator [Escherichia sp. 4_1_40B]
gi|260845566|ref|YP_003223344.1| putative folate-dependent regulatory protein [Escherichia coli
O103:H2 str. 12009]
gi|297518191|ref|ZP_06936577.1| putative global regulator [Escherichia coli OP50]
gi|301027803|ref|ZP_07191108.1| folate-binding protein YgfZ [Escherichia coli MS 196-1]
gi|307139586|ref|ZP_07498942.1| putative global regulator [Escherichia coli H736]
gi|307310483|ref|ZP_07590131.1| folate-binding protein YgfZ [Escherichia coli W]
gi|312972860|ref|ZP_07787033.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70]
gi|331643589|ref|ZP_08344720.1| tRNA-modifying protein YgfZ [Escherichia coli H736]
gi|331669634|ref|ZP_08370480.1| tRNA-modifying protein YgfZ [Escherichia coli TA271]
gi|331678886|ref|ZP_08379560.1| tRNA-modifying protein YgfZ [Escherichia coli H591]
gi|332280417|ref|ZP_08392830.1| tRNA-modifying protein ygfZ [Shigella sp. D9]
gi|83287993|sp|P0ADE8|YGFZ_ECOLI RecName: Full=tRNA-modifying protein ygfZ
gi|83287994|sp|P0ADE9|YGFZ_SHIFL RecName: Full=tRNA-modifying protein ygfZ
gi|122366369|sp|Q0T0Z9|YGFZ_SHIF8 RecName: Full=tRNA-modifying protein ygfZ
gi|166979582|sp|A7ZR07|YGFZ_ECO24 RecName: Full=tRNA-modifying protein ygfZ
gi|166979583|sp|A8A439|YGFZ_ECOHS RecName: Full=tRNA-modifying protein ygfZ
gi|226730795|sp|B7LYG2|YGFZ_ECO8A RecName: Full=tRNA-modifying protein ygfZ
gi|226730796|sp|B1XEI5|YGFZ_ECODH RecName: Full=tRNA-modifying protein ygfZ
gi|254814149|sp|B7LF83|YGFZ_ECO55 RecName: Full=tRNA-modifying protein ygfZ
gi|259710249|sp|C5A0H0|YGFZ_ECOBW RecName: Full=tRNA-modifying protein ygfZ
gi|887848|gb|AAA83079.1| ORF_o326 [Escherichia coli]
gi|1789265|gb|AAC75936.1| Hda suppressor; also involved in methylthio modification at
2-methylthio-6-iodeadenosine in tRNA [Escherichia coli
str. K-12 substr. MG1655]
gi|24053292|gb|AAN44369.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042467|gb|AAP18191.1| hypothetical protein S3083 [Shigella flexneri 2a str. 2457T]
gi|85675710|dbj|BAE76963.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K12 substr. W3110]
gi|110616349|gb|ABF05016.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157068038|gb|ABV07293.1| tRNA-modifying protein ygfZ [Escherichia coli HS]
gi|157078425|gb|ABV18133.1| tRNA-modifying protein ygfZ [Escherichia coli E24377A]
gi|169890294|gb|ACB04001.1| predicted folate-dependent regulatory protein [Escherichia coli
str. K-12 substr. DH10B]
gi|188490131|gb|EDU65234.1| tRNA-modifying protein [Escherichia coli 53638]
gi|190903911|gb|EDV63624.1| tRNA-modifying protein ygfZ [Escherichia coli B7A]
gi|192930838|gb|EDV83443.1| tRNA-modifying protein ygfZ [Escherichia coli E22]
gi|192956151|gb|EDV86615.1| tRNA-modifying protein ygfZ [Escherichia coli E110019]
gi|194415700|gb|EDX31967.1| tRNA-modifying protein ygfZ [Escherichia coli B171]
gi|194424329|gb|EDX40316.1| tRNA-modifying protein ygfZ [Escherichia coli 101-1]
gi|218353225|emb|CAU99146.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli 55989]
gi|218362214|emb|CAQ99832.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli IAI1]
gi|238862419|gb|ACR64417.1| predicted folate-dependent regulatory protein [Escherichia coli
BW2952]
gi|242378429|emb|CAQ33210.1| folate-binding protein [Escherichia coli BL21(DE3)]
gi|253323305|gb|ACT27907.1| folate-binding protein YgfZ [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974711|gb|ACT40382.1| putative global regulator [Escherichia coli B str. REL606]
gi|253978877|gb|ACT44547.1| putative global regulator [Escherichia coli BL21(DE3)]
gi|257760713|dbj|BAI32210.1| predicted folate-dependent regulatory protein [Escherichia coli
O103:H2 str. 12009]
gi|260448056|gb|ACX38478.1| folate-binding protein YgfZ [Escherichia coli DH1]
gi|299879065|gb|EFI87276.1| folate-binding protein YgfZ [Escherichia coli MS 196-1]
gi|306909378|gb|EFN39873.1| folate-binding protein YgfZ [Escherichia coli W]
gi|309703258|emb|CBJ02593.1| tRNA-modifying protein [Escherichia coli ETEC H10407]
gi|310332802|gb|EFQ00016.1| tRNA-modifying protein ygfZ [Escherichia coli 1827-70]
gi|313647938|gb|EFS12384.1| tRNA-modifying protein ygfZ [Shigella flexneri 2a str. 2457T]
gi|315062202|gb|ADT76529.1| predicted folate-dependent regulatory protein [Escherichia coli W]
gi|315137497|dbj|BAJ44656.1| putative global regulator [Escherichia coli DH1]
gi|315614945|gb|EFU95583.1| tRNA-modifying protein ygfZ [Escherichia coli 3431]
gi|320202559|gb|EFW77129.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli EC4100B]
gi|323162510|gb|EFZ48360.1| tRNA-modifying protein ygfZ [Escherichia coli E128010]
gi|323183453|gb|EFZ68850.1| tRNA-modifying protein ygfZ [Escherichia coli 1357]
gi|323377214|gb|ADX49482.1| folate-binding protein YgfZ [Escherichia coli KO11]
gi|323935870|gb|EGB32169.1| folate-binding protein YgfZ [Escherichia coli E1520]
gi|323941581|gb|EGB37761.1| folate-binding protein YgfZ [Escherichia coli E482]
gi|323960805|gb|EGB56426.1| folate-binding protein YgfZ [Escherichia coli H489]
gi|323971664|gb|EGB66893.1| folate-binding protein YgfZ [Escherichia coli TA007]
gi|331037060|gb|EGI09284.1| tRNA-modifying protein YgfZ [Escherichia coli H736]
gi|331063302|gb|EGI35215.1| tRNA-modifying protein YgfZ [Escherichia coli TA271]
gi|331073716|gb|EGI45037.1| tRNA-modifying protein YgfZ [Escherichia coli H591]
gi|332102769|gb|EGJ06115.1| tRNA-modifying protein ygfZ [Shigella sp. D9]
gi|332344795|gb|AEE58129.1| tRNA-modifying protein YgfZ [Escherichia coli UMNK88]
gi|332753734|gb|EGJ84113.1| tRNA-modifying protein ygfZ [Shigella flexneri K-671]
gi|332754471|gb|EGJ84837.1| tRNA-modifying protein ygfZ [Shigella flexneri 2747-71]
gi|332765829|gb|EGJ96042.1| folate-dependent regulatory protein [Shigella flexneri 2930-71]
gi|332999669|gb|EGK19254.1| tRNA-modifying protein ygfZ [Shigella flexneri VA-6]
gi|333000715|gb|EGK20290.1| tRNA-modifying protein ygfZ [Shigella flexneri K-272]
gi|333015058|gb|EGK34401.1| tRNA-modifying protein ygfZ [Shigella flexneri K-304]
gi|333015229|gb|EGK34571.1| tRNA-modifying protein ygfZ [Shigella flexneri K-227]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|328474112|gb|EGF44917.1| hypothetical protein VP10329_15430 [Vibrio parahaemolyticus 10329]
Length = 322
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 98/272 (36%), Gaps = 34/272 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L + I + G +L +T DV++L + A +GK+ F +
Sbjct: 21 LSISRLDHLGMITMVGDDKKSYLHGQVTCDVVSLEKDQSTLGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +++ +S + + ++ Y + S V IE N V+L + + S ++E
Sbjct: 81 GDGYGMIQ-PKSAIEIELKEIKKYAVFSKVTIE--ESNDVILGVAGVNADAFVSALNEDA 137
Query: 121 S---------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ + +++ + + + I + +
Sbjct: 138 GDVRIINGGTAVKVEANRWLLVVTEEAAQALIENSDATLTTRELWTRFDIESALP-FVSA 196
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L GIS TKGCY GQE V+R ++R ++ I+ G +
Sbjct: 197 TAQNEHIPQALNIQALGGISFTKGCYTGQETVARAKYRGTNKRAMYIVKGVTSTALNDDA 256
Query: 220 ILTDD------IEIGTLGVV---VGKKALAIA 242
I + +GTL +A+ +
Sbjct: 257 IELERSVGDNWRSVGTLLAHYQFSDNQAMGLI 288
>gi|209695953|ref|YP_002263883.1| hypothetical protein VSAL_I2535 [Aliivibrio salmonicida LFI1238]
gi|226730791|sp|B6EKN9|YGFZ_ALISL RecName: Full=tRNA-modifying protein ygfZ
gi|208009906|emb|CAQ80219.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 318
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 26/245 (10%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + I + G +LQ +TADV+TLP +GK+ F + D +
Sbjct: 25 LNDWALITMIGNDKKSYLQGQVTADVVTLPQDDITFGGHCDAKGKLWSIFQLFNHN-DGY 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------WNQEHTFSNSSFID-- 117
L RS ++ + ++ Y + S V I + + +S W +HT ++++
Sbjct: 84 ALFQRRSAIETELTEIKKYSVFSKVDIAVGDDVLLGISGKKATDWVNKHTTTDANVRACE 143
Query: 118 ----ERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHGIVDPNTDFLPSTI 165
+ S LL T H + I D + I HG+ + + L +
Sbjct: 144 LGTFAKISETQWLLVTTPEHKKNIINQESNTVLCDESLWSLHTIQHGLPQLD-NALSNAH 202
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTDD 224
P + + GIS KGCY GQE V+R ++R I ++ +++G ++ +P +G I +
Sbjct: 203 IPQAMNLQAVGGISFAKGCYTGQETVARAKYRGINKRAMYLLSGQSNSIPVAGDAI---E 259
Query: 225 IEIGT 229
+G
Sbjct: 260 RSVGE 264
>gi|26249314|ref|NP_755354.1| putative global regulator [Escherichia coli CFT073]
gi|81474766|sp|Q8FE70|YGFZ_ECOL6 RecName: Full=tRNA-modifying protein ygfZ
gi|26109722|gb|AAN81927.1|AE016766_15 Unknown protein from 2D-page [Escherichia coli CFT073]
gi|307554875|gb|ADN47650.1| tRNA-modifying protein YgfZ [Escherichia coli ABU 83972]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LATVKLED 287
>gi|323188703|gb|EFZ73988.1| tRNA-modifying protein ygfZ [Escherichia coli RN587/1]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|293412257|ref|ZP_06654980.1| tRNA-modifying protein ygfZ [Escherichia coli B354]
gi|291469028|gb|EFF11519.1| tRNA-modifying protein ygfZ [Escherichia coli B354]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTADQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|56414994|ref|YP_152069.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161615996|ref|YP_001589961.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550067|ref|ZP_02343824.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168231154|ref|ZP_02656212.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168242836|ref|ZP_02667768.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194445927|ref|YP_002042300.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194449722|ref|YP_002047033.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194469818|ref|ZP_03075802.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194470174|ref|ZP_03076158.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197249201|ref|YP_002147961.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197363923|ref|YP_002143560.1| global regulator [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|200386928|ref|ZP_03213540.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205353972|ref|YP_002227773.1| global regulator [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858311|ref|YP_002244962.1| global regulator [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|81360906|sp|Q5PJF4|YGFZ_SALPA RecName: Full=tRNA-modifying protein ygfZ
gi|189041185|sp|A9N3M5|YGFZ_SALPB RecName: Full=tRNA-modifying protein ygfZ
gi|226730802|sp|B5F5H2|YGFZ_SALA4 RecName: Full=tRNA-modifying protein ygfZ
gi|226730804|sp|B5QXH5|YGFZ_SALEP RecName: Full=tRNA-modifying protein ygfZ
gi|226730805|sp|B5RE09|YGFZ_SALG2 RecName: Full=tRNA-modifying protein ygfZ
gi|226730806|sp|B4TGW8|YGFZ_SALHS RecName: Full=tRNA-modifying protein ygfZ
gi|226730807|sp|B4T543|YGFZ_SALNS RecName: Full=tRNA-modifying protein ygfZ
gi|226730808|sp|B5BFL3|YGFZ_SALPK RecName: Full=tRNA-modifying protein ygfZ
gi|56129251|gb|AAV78757.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161365360|gb|ABX69128.1| hypothetical protein SPAB_03796 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404590|gb|ACF64812.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408026|gb|ACF68245.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456182|gb|EDX45021.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194456538|gb|EDX45377.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197095400|emb|CAR60959.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212904|gb|ACH50301.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|199604026|gb|EDZ02571.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205273753|emb|CAR38748.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324690|gb|EDZ12529.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205334562|gb|EDZ21326.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337989|gb|EDZ24753.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|206710114|emb|CAR34469.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326629086|gb|EGE35429.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|168823060|ref|ZP_02835060.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205340631|gb|EDZ27395.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320087478|emb|CBY97243.1| tRNA-modifying protein ygfZ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|119476432|ref|ZP_01616783.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2143]
gi|119450296|gb|EAW31531.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2143]
Length = 359
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 30/229 (13%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G FLQ T DV + + A TP+G+++ FL++ E + ++L
Sbjct: 49 YGLLSISGPDTSKFLQGQTTCDVDLVTCSHSTLGAYCTPKGRVISSFLLASKEPNEYLLR 108
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------NSS 114
+ S S Y + S E++ V + E + +S
Sbjct: 109 LRTSVLQSTQSVFSKYIVFSKAEQEVKSDQYVCICLAGETAKNTIQSLFNVATSDIYQTS 168
Query: 115 FIDERFSI---ADVLLHRTWGHNEKIAS------------DIKTYHELRINHGIVDPNTD 159
++++ F+I D L+H W ++ + + L I+ GI D ++
Sbjct: 169 WLNDNFTIQLDTDGLIHECWILESELEQLWPRLSKGLELKGSRFWELLAISRGIGD-VSE 227
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
P + +S KGCY GQE+V+R+Q++ +++ +
Sbjct: 228 QTVDMFIPQMLNYQITGAVSFNKGCYTGQEIVARMQYKGKLKRPMYRVK 276
>gi|16766349|ref|NP_461964.1| global regulator [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994112|ref|ZP_02575204.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168261789|ref|ZP_02683762.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|197263849|ref|ZP_03163923.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|81521741|sp|Q8ZM80|YGFZ_SALTY RecName: Full=tRNA-modifying protein ygfZ
gi|16421599|gb|AAL21923.1| putative aminomethyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|197242104|gb|EDY24724.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205328009|gb|EDZ14773.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205349199|gb|EDZ35830.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261248180|emb|CBG26016.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995203|gb|ACY90088.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159604|emb|CBW19123.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914070|dbj|BAJ38044.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225722|gb|EFX50776.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323131404|gb|ADX18834.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332989915|gb|AEF08898.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS ++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|198242202|ref|YP_002217026.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226730803|sp|B5FUG1|YGFZ_SALDC RecName: Full=tRNA-modifying protein ygfZ
gi|197936718|gb|ACH74051.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326624794|gb|EGE31139.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 326
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS ++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSVLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|291086195|ref|ZP_06355083.2| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220]
gi|291068505|gb|EFE06614.1| folate-binding protein YgfZ [Citrobacter youngae ATCC 29220]
Length = 306
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 42/270 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYIQGQVTADVSQMTEHQHVLAAHCDAKGKMWSNLRLFRNSDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN----------- 112
LE R+ RD+ + +L Y + S V+I + V + +N
Sbjct: 63 WLE-RRNLRDAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFSELPNSDKQ 121
Query: 113 -----------SSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
ERF + A+ L+ + G E ++ + + L I GI
Sbjct: 122 VISEGACTILWFEHPAERFLLIVDVATAESLVEKLRGEAE--LNNSQQWLALDIEAGIPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+T P + L GIS KGCY GQE+V+R + R ++ + GT +P
Sbjct: 180 IDT-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGTASRVP 238
Query: 215 PSGSPILTDDIEIGT----LGVVVGKKALA 240
+G + ++++G G V+ LA
Sbjct: 239 EAGEDL---ELKMGENWRRTGTVLAAVQLA 265
>gi|168463783|ref|ZP_02697700.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195633631|gb|EDX52045.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 326
Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 110/277 (39%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+P +G + ++++G G LA A++D
Sbjct: 255 ASRVPEAGEDL---ELQMGENWRRTGAI-LAAAQLDD 287
>gi|325498459|gb|EGC96318.1| global regulator [Escherichia fergusonii ECD227]
Length = 326
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|254522474|ref|ZP_05134529.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14]
gi|219720065|gb|EED38590.1| glycine cleavage T protein [Stenotrophomonas sp. SKA14]
Length = 291
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 17/268 (6%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + + G A+ F A ++DV LP + SA L+ +G+ L F + ++ ED
Sbjct: 14 RLPGHPLLSLQGADAVVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLAEDH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117
+L + D++ +L + R V + ++ V ++ S ++
Sbjct: 74 VLLVLADGDADAIASQLQRFVFRRKVKVLVRSDLAVAGAFTAPEAASGAAIAHAAGDGWE 133
Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
R G A+ + + + +G+ + P
Sbjct: 134 LDLGSDALPRTLRIGAADAFAAGSEADEAAFALAWRQADLRYGLPRL-EESQREVWTPQQ 192
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT
Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAMPAQAGDGVQQDGAALGT 251
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ V G ALA+ ++ D ++ G A+
Sbjct: 252 IASVAGDLALAVLPLEASDADLQVGGAV 279
>gi|204928215|ref|ZP_03219415.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322537|gb|EDZ07734.1| tRNA-modifying protein YgfZ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 326
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS ++ + +L Y + S V+I ++
Sbjct: 79 RDGFAWIE-RRSVHEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T ERF + A++L + G E ++ + + L I
Sbjct: 138 NSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGK 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+P +G + ++++G G LA A++D
Sbjct: 255 ASRVPEAGEDL---ELQMGENWRRTGAI-LAAAQLDD 287
>gi|320540113|ref|ZP_08039768.1| putative predicted folate-dependent regulatory protein [Serratia
symbiotica str. Tucson]
gi|320029779|gb|EFW11803.1| putative predicted folate-dependent regulatory protein [Serratia
symbiotica str. Tucson]
Length = 328
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 34/249 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + + G + +LQ +TAD+ L +GK+ +
Sbjct: 20 LTLISLEDWALVTLEGPDTVKYLQGQVTADIDALAADQHVPCGHCDAKGKMWSTLRLFHR 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E LE RS S + ++ Y + S V I ++
Sbjct: 80 GEGFAYLE-RRSVLGSQLAEIKKYAVFSKVTIAADNDAVLLGVAGFQARAALASTFAILP 138
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T + ERF ++A+ L+ + H++ +D + + L I
Sbjct: 139 DAKHQVVQEGDTTLLQFTEPAERFLLVTTTTVAEQLVTKL--HDQAELNDSRQWLALDIE 196
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + + P + L GIS +KGCY GQE+V+R + R ++ + G
Sbjct: 197 AGYP-IIDNANSAQLIPQATNLQALQGISFSKGCYTGQEMVARAKFRGANKRALYWLEGR 255
Query: 211 DDLPPSGSP 219
P +
Sbjct: 256 AGRTPQAAE 264
>gi|258622355|ref|ZP_05717380.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585371|gb|EEW10095.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 366
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 30/288 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 66 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEEQQFTFGAHCDAKGKVWSVFRLFHHN- 124
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113
D + + +S + + +L Y + S V I + + +Q + + +S
Sbjct: 125 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 184
Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163
R S LL T E+ + + + + I + T +
Sbjct: 185 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLCVEQALWTCMDIEEAVP-VVTQNAQN 243
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S +
Sbjct: 244 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 303
Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263
+ +G G+ +AI I + + +++G+ L +
Sbjct: 304 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 350
>gi|226480062|emb|CAX73327.1| hypotherical protein [Schistosoma japonicum]
Length = 396
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 45/244 (18%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S L +S I V G SA FLQ + T D+ ++ + + +L I
Sbjct: 21 LSISQLKERSLICVRGTSADEFLQGLTTNDIKSINHPNSFM---------VLTDAFIYHT 71
Query: 61 E-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------ 103
+ +++E+D + L+ L Y LR V I+ + ++
Sbjct: 72 NRLSANQSDYLIEVDANYVPDLVKHLNRYNLRGKVKIDANVPIHLWIAMPKSKQSNKLSD 131
Query: 104 ---WNQEHTFSNSSFI-------DER---------FSIADVLLHRTWGHNEKIASDIKTY 144
W+ +F+ S D R S D ++ + + DI Y
Sbjct: 132 YKAWSPVDSFALSDQRQLIFFASDPRGISGWSGRILSTPDASVNDIFPSCDTHPLDISLY 191
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
H R G+ + +F+ + P +A DL G+S +KGCYIGQE+ +R +IR+R
Sbjct: 192 HTARWELGLPEGIKEFITNDTLPFEANTDLSGGVSFSKGCYIGQELTARTHFTGVIRRRY 251
Query: 205 MIIT 208
+ I
Sbjct: 252 VPIK 255
>gi|332752935|gb|EGJ83319.1| tRNA-modifying protein ygfZ [Shigella flexneri 4343-70]
gi|333000021|gb|EGK19604.1| tRNA-modifying protein ygfZ [Shigella flexneri K-218]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 VSRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|227328389|ref|ZP_03832413.1| putative global regulator [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 333
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TADV LP A +GK+ +
Sbjct: 26 TLISLDDWALVTMVGPDTVKYLQGQVTADVGALPDDGHTLCAHCDAKGKMWSNLRLFHHG 85
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101
E +E R+ RD+ + +L Y + S I ++
Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAILLGAAGAGIRELLASVFSQLPD 144
Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ ++ T + + ERF L G + +D + L I G
Sbjct: 145 VEHPVVQHEGATLLHFAHPAERFLLVLSPEHSASLLEQLGDKVSL-NDSCQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211
++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G +
Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262
Query: 212 DLPPSGSPI 220
+P +G +
Sbjct: 263 KVPQAGDDL 271
>gi|91212277|ref|YP_542263.1| putative global regulator [Escherichia coli UTI89]
gi|117625129|ref|YP_854117.1| putative global regulator [Escherichia coli APEC O1]
gi|218559891|ref|YP_002392804.1| global regulator [Escherichia coli S88]
gi|218691023|ref|YP_002399235.1| putative global regulator [Escherichia coli ED1a]
gi|237706457|ref|ZP_04536938.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA]
gi|306812199|ref|ZP_07446397.1| putative global regulator [Escherichia coli NC101]
gi|331648645|ref|ZP_08349733.1| tRNA-modifying protein YgfZ [Escherichia coli M605]
gi|331659028|ref|ZP_08359970.1| tRNA-modifying protein YgfZ [Escherichia coli TA206]
gi|118577994|sp|Q1R7D2|YGFZ_ECOUT RecName: Full=tRNA-modifying protein ygfZ
gi|166979584|sp|A1AF88|YGFZ_ECOK1 RecName: Full=tRNA-modifying protein ygfZ
gi|226730792|sp|B7MM85|YGFZ_ECO45 RecName: Full=tRNA-modifying protein ygfZ
gi|254814150|sp|B7MZ51|YGFZ_ECO81 RecName: Full=tRNA-modifying protein ygfZ
gi|91073851|gb|ABE08732.1| 2D-phage unknown protein [Escherichia coli UTI89]
gi|115514253|gb|ABJ02328.1| putative global regulator [Escherichia coli APEC O1]
gi|218366660|emb|CAR04414.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli S88]
gi|218428587|emb|CAR09368.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia coli ED1a]
gi|222034593|emb|CAP77335.1| tRNA-modifying protein ygfZ [Escherichia coli LF82]
gi|226899497|gb|EEH85756.1| tRNA-modifying protein ygfZ [Escherichia sp. 3_2_53FAA]
gi|294490592|gb|ADE89348.1| tRNA-modifying protein ygfZ [Escherichia coli IHE3034]
gi|305854237|gb|EFM54675.1| putative global regulator [Escherichia coli NC101]
gi|307625529|gb|ADN69833.1| putative global regulator [Escherichia coli UM146]
gi|312947431|gb|ADR28258.1| putative global regulator [Escherichia coli O83:H1 str. NRG 857C]
gi|323951663|gb|EGB47538.1| folate-binding protein YgfZ [Escherichia coli H252]
gi|323957381|gb|EGB53103.1| folate-binding protein YgfZ [Escherichia coli H263]
gi|330908930|gb|EGH37444.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli AA86]
gi|331042392|gb|EGI14534.1| tRNA-modifying protein YgfZ [Escherichia coli M605]
gi|331053610|gb|EGI25639.1| tRNA-modifying protein YgfZ [Escherichia coli TA206]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|331654396|ref|ZP_08355396.1| tRNA-modifying protein YgfZ [Escherichia coli M718]
gi|331047778|gb|EGI19855.1| tRNA-modifying protein YgfZ [Escherichia coli M718]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTVDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++TG+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|289209042|ref|YP_003461108.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix]
gi|288944673|gb|ADC72372.1| folate-binding protein YgfZ [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 100/251 (39%), Gaps = 32/251 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ ++V G A FLQ D+ + ++ S+ +P+G+ F + + D
Sbjct: 41 CDLSHRGLLEVRGDDATEFLQGQFGNDITQVDASHSQISSYSSPKGRAYAVFRVLRTA-D 99
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--------SSF 115
+++LE+ + +++ +L + LR++V+IE + + + S +
Sbjct: 100 SYLLEMPADRIEAIAKRLRMFVLRAHVVIERADDSHIHFGLSGPDAESELNNALGVCPAN 159
Query: 116 IDERFSIADVLLHRTWGHNEKI---------------------ASDIKTYHELRINHGIV 154
+D+ V + R G + + + + L I G+
Sbjct: 160 VDDVVEKDGVTVVRVNGVHPRFELFGELEPMRTAWDKLNVRSGPVGPREWALLDILAGMP 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ P + L I+ KGCY GQEVV+R+ + +++R + P
Sbjct: 220 -TVVEATSELFVPQMLNLHALGAINFEKGCYPGQEVVARMHYLGKLKRRMFRLAIHAAEP 278
Query: 215 P-SGSPILTDD 224
P GSP+ D
Sbjct: 279 PQPGSPVYRAD 289
>gi|332087725|gb|EGI92852.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 155-74]
Length = 305
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFGHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|215488198|ref|YP_002330629.1| putative global regulator [Escherichia coli O127:H6 str. E2348/69]
gi|254814148|sp|B7UHU7|YGFZ_ECO27 RecName: Full=tRNA-modifying protein ygfZ
gi|215266270|emb|CAS10699.1| predicted folate-dependent regulatory protein [Escherichia coli
O127:H6 str. E2348/69]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVIDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|218550146|ref|YP_002383937.1| global regulator [Escherichia fergusonii ATCC 35469]
gi|226730800|sp|B7LPB2|YGFZ_ESCF3 RecName: Full=tRNA-modifying protein ygfZ
gi|218357687|emb|CAQ90328.1| enzyme component involved in 2-methylthio-6-iodeadenosine formation
[Escherichia fergusonii ATCC 35469]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 104/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A+ L + G E ++ + + L I
Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|90408990|ref|ZP_01217121.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
gi|90309904|gb|EAS38058.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
Length = 324
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 40/286 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + I V G+ I FLQ +T D+ +L +A TPQGK+ F + +E+
Sbjct: 19 CPLDSWDVIAVQGEDRISFLQGQLTCDINSLKIGEQTLAAQCTPQGKVCSLFHVILLEDR 78
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L+ S + + L Y S V I + + L + F + E S
Sbjct: 79 VLFLQ-PSSVTEKQLTALQKYAAFSKVKIHKDSEYQAITLLGEKSSDFISQELTTENISK 137
Query: 123 ADVLLH-------------------------RTWGHNEKIAS--DIKTYHELRINHGIVD 155
+ +LL E A+ D ++ + I G+
Sbjct: 138 SGLLLPNGMHISKQLTPSLRYLLVLKKEQGSALLKQLEDKATYHDDSLWNAMNIAAGMA- 196
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ P + L+GIS TKGCYIGQE ++R ++R ++ I++G P
Sbjct: 197 FIEEINSEKFIPQMLNLQALDGISFTKGCYIGQETIARAKYRGANKRALFILSGHASCAP 256
Query: 216 SGSP---ILTDD--IEIGTLGVVVGK-----KALAIARIDKVDHAI 251
+L ++ IG++ + LA+ D I
Sbjct: 257 KAGDTLQLLLNNQWKRIGSVISACQYGDAHIEVLAVLPKDSQADDI 302
>gi|323966700|gb|EGB62132.1| folate-binding protein YgfZ [Escherichia coli M863]
gi|327251662|gb|EGE63348.1| tRNA-modifying protein ygfZ [Escherichia coli STEC_7v]
Length = 326
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L + G E ++ + + L I
Sbjct: 138 TKEKQVVKEGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|324115084|gb|EGC09049.1| folate-binding protein YgfZ [Escherichia fergusonii B253]
Length = 326
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVIREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|237729839|ref|ZP_04560320.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2]
gi|226908445|gb|EEH94363.1| tRNA-modifying protein ygfZ [Citrobacter sp. 30_2]
Length = 327
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 42/275 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGVDSEKYIQGQVTADVSQMTEHQHLLAAHCDAKGKMWSNLRLFRQ 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ LE RS RD+ + +L Y + S V I ++
Sbjct: 79 GDGFAWLE-RRSLRDAQLTELKKYAVFSKVAIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L+ + G E ++ + + L I
Sbjct: 138 NSDKQVITEGASTVLWFEHPAERFLLIVDATTAETLVEKLRGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI +T + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGIPVIDT-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAMWTLAGA 254
Query: 211 DD-LPPSGSPILTDDIEIGT----LGVVVGKKALA 240
+P +G + ++++G G V+ LA
Sbjct: 255 AGRVPEAGEDL---ELKMGENWRRTGTVLAAVQLA 286
>gi|170765986|ref|ZP_02900797.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627]
gi|170125132|gb|EDS94063.1| tRNA-modifying protein ygfZ [Escherichia albertii TW07627]
Length = 326
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 104/276 (37%), Gaps = 38/276 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVCQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+S + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRESQLTELKKYAVFSKVTIAPDGERVLLGVAGFQARAALANLFSELP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A+ L+ + G E ++ + + L I
Sbjct: 138 SKEKQVVREGATTLLWFEHPAERFLLVTDEATANTLVDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGLPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLVGH 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
LP +G + ++++G G A+ R D
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTVLAAVKRED 287
>gi|312964841|ref|ZP_07779081.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75]
gi|312290397|gb|EFR18277.1| tRNA-modifying protein ygfZ [Escherichia coli 2362-75]
Length = 326
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVIDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPI 220
LP +G +
Sbjct: 255 ASRLPEAGEDL 265
>gi|262042539|ref|ZP_06015696.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010968|ref|ZP_08306933.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3]
gi|259040099|gb|EEW41213.1| folate-binding protein YgfZ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534345|gb|EGF60955.1| folate-binding protein YgfZ [Klebsiella sp. MS 92-3]
Length = 306
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 89/244 (36%), Gaps = 31/244 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + +LQ ITADV L +A +GK+ + + E
Sbjct: 3 LDDWALATISGPDSEKYLQGQITADVSHLTDAQHLLAAHCDAKGKMWSNLRVFRREGGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS RD+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSLRDAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAATP 121
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPN 157
+ + ERF + + E ++ + + L I G+ +
Sbjct: 122 VVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQFNNSQQWLALNIEAGLPVID 181
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPS 216
+ P + L GIS KGCY GQE+V+R + R ++ ++GT +P +
Sbjct: 182 S-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLSGTASRVPEA 240
Query: 217 GSPI 220
G +
Sbjct: 241 GEDL 244
>gi|26988156|ref|NP_743581.1| hypothetical protein PP_1423 [Pseudomonas putida KT2440]
gi|24982889|gb|AAN67045.1|AE016333_6 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 313
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN----------- 112
++L + D+ + L Y + S + +
Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLVVPAAAG 126
Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ ++ +AD R + + +I GI
Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPVADAEPVRQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G
Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHA 250
+ I + +G + + G + LA+ + V+
Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGTGCELLAVLSAEAVEDG 284
>gi|167035381|ref|YP_001670612.1| folate-binding protein YgfZ [Pseudomonas putida GB-1]
gi|166861869|gb|ABZ00277.1| folate-binding protein YgfZ [Pseudomonas putida GB-1]
Length = 313
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 95/279 (34%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119
++L + D+ + L Y + S + + + +D
Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESSAWARFGLQGGDAALQALGLDVPAAAG 126
Query: 120 ---------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
AD R + + +I GI
Sbjct: 127 STVRHAGLIAVAVSAGRVELWVPAADAEPVRQALAAALPEGSVNDWLLGQIRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G
Sbjct: 186 GQTHELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245
Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250
+ I + +G + + G + LA+ D V
Sbjct: 246 AEIFSPTHGSSVGEVVIAASNGPGCELLAVLSADAVADD 284
>gi|323495995|ref|ZP_08101059.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326]
gi|323318957|gb|EGA71904.1| aminomethyltransferase [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 29/269 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ +L++ I + G+ +LQ +T DV+TL + A +GK+ F +
Sbjct: 21 LALAHLTSWGAINMVGQDKKSYLQGQVTCDVVTLAEDQSTFGAHCDAKGKVWSAFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLSWNQ 106
+ +L+ +S D+ + +L Y + S V I IQ I+ + S
Sbjct: 81 NDGYAMLQ-PKSAIDAELVELKKYAIFSKVEITQSQDIVLGLVGQNAIQFIDTITESRGD 139
Query: 107 EHTFSNSSFI---DERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
F + + +R+ + + + D + L I + +
Sbjct: 140 VRPFPGGTAVMVDQQRWLLMLSEESAQQLCSSISAPLVDEALWTRLDIEAALPVLGAE-Q 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPI 220
+ P + + GIS TKGCY GQE V+R ++R I ++ ++ G+ G I
Sbjct: 199 QTEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGINKRAMYMVKGSISTDIQLGEEI 258
Query: 221 L----TDDIEIGTLGVV---VGKKALAIA 242
+ GTL +A+ +
Sbjct: 259 ERAVGENWRSAGTLLTHYQFADGQAIGLV 287
>gi|262170581|ref|ZP_06038259.1| glycine cleavage T-protein [Vibrio mimicus MB-451]
gi|261891657|gb|EEY37643.1| glycine cleavage T-protein [Vibrio mimicus MB-451]
Length = 323
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 30/288 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEEQQVTFGAHCDAKGKVWSVFRLFHHN- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113
D + + +S + + +L Y + S V I + + +Q + + +S
Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 141
Query: 114 ---SFIDERFSIADVLLHRTWGHNEKIASDI-------KTYHELRINHGIVDPNTDFLPS 163
R S LL T E+ + + + I + T +
Sbjct: 142 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLRVEQALWTRMDIEEAVP-VVTQNAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S +
Sbjct: 201 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 260
Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263
+ +G G+ +AI I + + +++G+ L +
Sbjct: 261 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 307
>gi|157148435|ref|YP_001455754.1| putative global regulator [Citrobacter koseri ATCC BAA-895]
gi|157085640|gb|ABV15318.1| hypothetical protein CKO_04260 [Citrobacter koseri ATCC BAA-895]
Length = 310
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV L + A +GK+ + +
Sbjct: 3 LTLITLDDWALASITGTDSEKYMQGQVTADVNQLTEQQHLLVAHCDAKGKMWSNLRLFRD 62
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ LE RS R++ + +L Y + S V I ++
Sbjct: 63 GDGFAWLE-RRSLREAQLTELKKYAVFSKVAIAPDDERVLLGIAGFQARAALANIFSELP 121
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L + G E ++ + + L I
Sbjct: 122 NSEKQVVSEGASTLLWFEHPAERFLLITDVATAESLTEKLRG--EAALNNSQQWLALDIE 179
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI ++ P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 180 AGIPVIDS-ANSGQFIPQATNLQALGGISFKKGCYSGQEMVARAKFRGANKRALWSLAGK 238
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 239 ASRVPETGEDL 249
>gi|323978809|gb|EGB73890.1| folate-binding protein YgfZ [Escherichia coli TW10509]
Length = 326
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L + G E ++ + + L I
Sbjct: 138 TKEKQVVKEGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|294340169|emb|CAZ88541.1| putative Glycine cleavage T protein (aminomethyl transferase)
[Thiomonas sp. 3As]
Length = 317
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/315 (18%), Positives = 105/315 (33%), Gaps = 49/315 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S L S ++V G L A ++ D P + AR +A+L PQG++L F+ ++
Sbjct: 5 SCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAVRLAP 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118
+ L +D S + + +L + LR ++ + + +
Sbjct: 65 EQIGLLLDVSIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLTPPAQP 124
Query: 119 ---RFSIADVLLHRTWGHNEKI---------------------------ASDIKTYHELR 148
R + LL R + A +
Sbjct: 125 WGVRRLESGALLLRLPQAGSAVRCVLLTERDQATQAEQAALRAELAALPALSPSEWALQD 184
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G+ P +L+ G++ KGCY GQEVV+R Q+R +++R +++
Sbjct: 185 IRAGLPHLTA-ATQQLFVPQMLNFELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVS 243
Query: 209 GTDDLPPSGSPILTDDIEIGTL--------GVVVGKKALAIARIDKVDHA-----IKKGM 255
G + P G ++ ALA +I + +G
Sbjct: 244 GPAAMQP-GQELVHAADPGQPCGVVVNAAADAAGVWWALAELKIALAEQPGLHLGSAEGP 302
Query: 256 ALTVHGVRVKASFPH 270
L + + + P
Sbjct: 303 ELKLGALPYALTAPD 317
>gi|324017296|gb|EGB86515.1| folate-binding protein YgfZ [Escherichia coli MS 117-3]
Length = 305
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|251791001|ref|YP_003005722.1| folate-binding protein YgfZ [Dickeya zeae Ech1591]
gi|247539622|gb|ACT08243.1| folate-binding protein YgfZ [Dickeya zeae Ech1591]
Length = 326
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 31/248 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TADV L A +GK+ +
Sbjct: 19 TLMSLDDWALVTLTGPDTVKYLQGQLTADVNDLQSSEQVLCAHCDAKGKMWSSIRLFHHG 78
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQPI 97
+ LE RS RD+ + +L Y + S I + P
Sbjct: 79 DGLAYLE-RRSIRDTQVTELKKYAVFSKTTIAADDGTILLGAAGLNIRALLAPLFDALPD 137
Query: 98 NGVVLSWNQEHTFSNSSFIDERF-SIADVLLHRTWGHN---EKIASDIKTYHELRINHGI 153
G + T ERF + D T + +D + + L I G
Sbjct: 138 AGNTVVHQPGATLLYLPSPTERFLLVLDAQRAATLIDALQPQVAFNDSRQWLALDIEAGQ 197
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDD 212
++ + P + L GIS TKGCY GQE+V+R ++R ++ + G +
Sbjct: 198 PIIDS-ANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGPSTQ 256
Query: 213 LPPSGSPI 220
+P +G +
Sbjct: 257 MPAAGDEL 264
>gi|293449221|ref|ZP_06663642.1| global regulator [Escherichia coli B088]
gi|291322311|gb|EFE61740.1| global regulator [Escherichia coli B088]
Length = 326
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 104/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS + + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVCEPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|320195017|gb|EFW69646.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Escherichia coli WV_060327]
Length = 326
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEYQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGS 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|255019683|ref|ZP_05291762.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Acidithiobacillus caldus ATCC 51756]
gi|254970906|gb|EET28389.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Acidithiobacillus caldus ATCC 51756]
Length = 321
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 52/313 (16%)
Query: 3 SVYLSN-QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
LS + G A FLQ + D+ +LP + S+ T +G+++ F + + +
Sbjct: 7 LAPLSEELGILHCHGADAEKFLQGQFSNDLTSLPSPGGQWSSYSTAKGRMIANFYLLR-D 65
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------NQEHT 109
+D F L + R +++ ++L ++L + V IE +L+ E
Sbjct: 66 DDGFWLLLSRDLTETVAERLRKFRLMAKVDIEDAGTTHALLALWGAGATEVLGNPGGEDV 125
Query: 110 FSNSSFIDERFSIADVLLH----------------------RTWGHNEKIASDIKTYHEL 147
+ + R V L R G +E +D +
Sbjct: 126 PATPHAVSVRNGARIVRLPWPEPSFLILASGDDIASWGEQLRARGAHEATGAD---WRLG 182
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
I GI N + P + +++L GIS TKGCY GQE+V+R + ++ + +
Sbjct: 183 SIRAGIAFINA-ATTEQVIPQELNLEVLGGISFTKGCYPGQEIVARSHYLGRLKNQCYRL 241
Query: 208 TGTDDLPPSGSPILT---DDIEIGTL--GVVVGK---KALAIARIDKVDH---AIKKGMA 256
L P G I + + IG + VG +ALA+ R + +H ++
Sbjct: 242 RAHAPLAP-GRAIFSAAMGEQSIGLVIQAAAVGDGSFEALAVVRAEDAEHSTLGLEAQGQ 300
Query: 257 LTVHGVRVKASFP 269
+ + + + S P
Sbjct: 301 VPLEKLELPYSLP 313
>gi|229524458|ref|ZP_04413863.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
bv. albensis VL426]
gi|229527079|ref|ZP_04416474.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
12129(1)]
gi|229335476|gb|EEO00958.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
12129(1)]
gi|229338039|gb|EEO03056.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
bv. albensis VL426]
Length = 339
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304
>gi|300921231|ref|ZP_07137604.1| folate-binding protein YgfZ [Escherichia coli MS 115-1]
gi|300411837|gb|EFJ95147.1| folate-binding protein YgfZ [Escherichia coli MS 115-1]
Length = 305
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------------- 105
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSVLPSKEKQ 121
Query: 106 ----QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VIREDATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|37681026|ref|NP_935635.1| aminomethyltransferase [Vibrio vulnificus YJ016]
gi|37199776|dbj|BAC95606.1| predicted aminomethyltransferase [Vibrio vulnificus YJ016]
Length = 343
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 45 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 104
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-------------HTF 110
+L+ D+S D + +L Y + + V I + + GV ++ TF
Sbjct: 105 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 163
Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ + + +R+ + A+ D + I F +
Sbjct: 164 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPA-FAQNE 222
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I +
Sbjct: 223 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIEPSAPETTISL-E 281
Query: 225 IEIG 228
+G
Sbjct: 282 RSVG 285
>gi|229507469|ref|ZP_04396974.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
BX 330286]
gi|229512336|ref|ZP_04401815.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
B33]
gi|229519472|ref|ZP_04408915.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
RC9]
gi|229606974|ref|YP_002877622.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae
MJ-1236]
gi|229344161|gb|EEO09136.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
RC9]
gi|229352301|gb|EEO17242.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
B33]
gi|229354974|gb|EEO19895.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
BX 330286]
gi|229369629|gb|ACQ60052.1| predicted aminomethyltransferase-like GcvT [Vibrio cholerae
MJ-1236]
Length = 339
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304
>gi|254507542|ref|ZP_05119676.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16]
gi|219549612|gb|EED26603.1| tRNA-modifying protein YgfZ [Vibrio parahaemolyticus 16]
Length = 321
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 29/250 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ +L++ I + G +LQ +T DV+TL + A +GK+ F +
Sbjct: 22 ALTHLTSWGAISMIGDDKKSYLQGQVTCDVVTLEQTQSTFGAHCDAKGKVWSVFRLFHHN 81
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------NGVVLSWNQEHTFSNSSF 115
+ + +S D + +L Y + S V I W +
Sbjct: 82 G-GYAMVQPKSAIDVELTELKKYAIFSKVDIAQSDDVLFGVMGEQATFWVDSLSNETGDV 140
Query: 116 IDERFSIADVLLHRTWG---------------HNEKIASDIKTYHELRINHGIVDPNTDF 160
A + + W +++ + TY+E I + + +
Sbjct: 141 RPIDGGTAVKVGPQRWLLIVSEASVESLLANCSAQRVEESLWTYYE--IEAALPFVSNE- 197
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSP 219
+ P + + GIS TKGCY GQE V+R ++R + ++ I+ GT G+
Sbjct: 198 QQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKRAMFIVKGTTASAIEEGAE 257
Query: 220 ILTDDIEIGT 229
+ + +G
Sbjct: 258 L---ERAVGE 264
>gi|300995669|ref|ZP_07181197.1| folate-binding protein YgfZ [Escherichia coli MS 200-1]
gi|300304777|gb|EFJ59297.1| folate-binding protein YgfZ [Escherichia coli MS 200-1]
gi|324005551|gb|EGB74770.1| folate-binding protein YgfZ [Escherichia coli MS 57-2]
gi|324011751|gb|EGB80970.1| folate-binding protein YgfZ [Escherichia coli MS 60-1]
Length = 305
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|227888448|ref|ZP_04006253.1| GCV family glycine cleavage complex aminomethyltransferase
[Escherichia coli 83972]
gi|300980307|ref|ZP_07174961.1| folate-binding protein YgfZ [Escherichia coli MS 45-1]
gi|301049317|ref|ZP_07196287.1| folate-binding protein YgfZ [Escherichia coli MS 185-1]
gi|227834717|gb|EEJ45183.1| GCV family glycine cleavage complex aminomethyltransferase
[Escherichia coli 83972]
gi|300298916|gb|EFJ55301.1| folate-binding protein YgfZ [Escherichia coli MS 185-1]
gi|300409315|gb|EFJ92853.1| folate-binding protein YgfZ [Escherichia coli MS 45-1]
gi|315293868|gb|EFU53220.1| folate-binding protein YgfZ [Escherichia coli MS 153-1]
Length = 305
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LATVKLED 266
>gi|323491208|ref|ZP_08096394.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG
20546]
gi|323314576|gb|EGA67654.1| putative aminomethyltransferase-like GcvT [Vibrio brasiliensis LMG
20546]
Length = 322
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 29/269 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L++ I + G +LQ +T DV+TL ++ A +GK+ F +
Sbjct: 21 LAIAPLNSWGAITMIGDDKKSYLQGQVTCDVVTLEPHLSTFGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ + S D + ++ Y + S V I+ + + + F +S
Sbjct: 81 NG-GYAMFQPTSVIDKELAEIKKYAIFSKVEIKQSEEIALGVMGEKATEFIDSLSSQTGD 139
Query: 116 -----------IDER---FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
IDE+ +A + ++ + + L I G+ +
Sbjct: 140 VRPVEGGTAVKIDEQRWLLLVAPDAAEQLVTTSQADKVNESLWTLLDIKAGLPILTAE-Q 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGS- 218
+ P + ++GIS TKGCY GQE V+R ++R I ++ I+ G D+P +
Sbjct: 199 QNEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRALFIVKGEAQQDIPANAEL 258
Query: 219 --PILTDDIEIGTLGVV---VGKKALAIA 242
+ + G L +A+A+
Sbjct: 259 ERAVGENWRSAGKLLASYRFSDNQAIALV 287
>gi|190573775|ref|YP_001971620.1| putative aminomethyl transferase [Stenotrophomonas maltophilia
K279a]
gi|190011697|emb|CAQ45316.1| putative aminomethyl transferase [Stenotrophomonas maltophilia
K279a]
Length = 291
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 17/268 (6%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + + G A F A ++DV LP + SA L+ +G+ L F + ++ +D
Sbjct: 14 RLPGHQLLSLQGPDAAVFAHAQFSSDVTALPLLHWQWSAWLSAKGRTLAVFQLLRLADDH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117
+L + D++ +L + R V + ++ ++ S ++
Sbjct: 74 LMLVLADGDADAIASQLQRFVFRRKVKVLVRDDLAAAGAFTAPEAASGAAIAQAAGDGWE 133
Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
R G A+ + + + +G+ + P
Sbjct: 134 LDLGSDALPRTLRIGAADAFAAGSETDEAAFALAWRQADLRYGLPRL-EEGQREVWTPQQ 192
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
+D LNG S+ KGCY GQE+V+R KR + + T +G + D +GT
Sbjct: 193 LGLDRLNGYSVKKGCYPGQEIVARTHFLGKA-KRAVQLLHTAAPAQAGDGVQQDGAALGT 251
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ V G ALA+ ++ D ++ G A+
Sbjct: 252 IACVAGDLALAVLPLEAGDADLQVGDAI 279
>gi|229521298|ref|ZP_04410718.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TM 11079-80]
gi|229341830|gb|EEO06832.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TM 11079-80]
Length = 339
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 97/272 (35%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 39 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 217 EHIPQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304
>gi|258626739|ref|ZP_05721561.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580995|gb|EEW05922.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 323
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 30/288 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLEGQQVTFGAHCDAKGKVWSVFRLFHHN- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113
D + + +S + + +L Y + S V I + + +Q + + +S
Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVR 141
Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163
R S LL T E+ + + + + I + T +
Sbjct: 142 RIEGGTAVRISELRWLLLVTAEQAEQYVNAWQGLCVEQALWTCMDIEEAVP-VVTQNAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + +NGIS TKGCY GQE V+R ++R I ++ I+ G + P S +
Sbjct: 201 EHIPQALNVQAVNGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINAPLSHEEPVIL 260
Query: 224 DIEIGTLGVVVGK--------KALAIARIDKVDHAIKKGMALTVHGVR 263
+ +G G+ +AI I + + +++G+ L +
Sbjct: 261 ERAVGENWRSAGQLLAHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 307
>gi|300815649|ref|ZP_07095873.1| folate-binding protein YgfZ [Escherichia coli MS 107-1]
gi|300820703|ref|ZP_07100854.1| folate-binding protein YgfZ [Escherichia coli MS 119-7]
gi|300906551|ref|ZP_07124242.1| folate-binding protein YgfZ [Escherichia coli MS 84-1]
gi|300925120|ref|ZP_07141034.1| folate-binding protein YgfZ [Escherichia coli MS 182-1]
gi|300928165|ref|ZP_07143707.1| folate-binding protein YgfZ [Escherichia coli MS 187-1]
gi|300947622|ref|ZP_07161793.1| folate-binding protein YgfZ [Escherichia coli MS 116-1]
gi|300954261|ref|ZP_07166724.1| folate-binding protein YgfZ [Escherichia coli MS 175-1]
gi|301303057|ref|ZP_07209184.1| folate-binding protein YgfZ [Escherichia coli MS 124-1]
gi|301327300|ref|ZP_07220556.1| folate-binding protein YgfZ [Escherichia coli MS 78-1]
gi|301643751|ref|ZP_07243789.1| folate-binding protein YgfZ [Escherichia coli MS 146-1]
gi|309793971|ref|ZP_07688396.1| folate-binding protein YgfZ [Escherichia coli MS 145-7]
gi|281602231|gb|ADA75215.1| tRNA-modifying protein ygfZ [Shigella flexneri 2002017]
gi|300318722|gb|EFJ68506.1| folate-binding protein YgfZ [Escherichia coli MS 175-1]
gi|300401590|gb|EFJ85128.1| folate-binding protein YgfZ [Escherichia coli MS 84-1]
gi|300418722|gb|EFK02033.1| folate-binding protein YgfZ [Escherichia coli MS 182-1]
gi|300452797|gb|EFK16417.1| folate-binding protein YgfZ [Escherichia coli MS 116-1]
gi|300463805|gb|EFK27298.1| folate-binding protein YgfZ [Escherichia coli MS 187-1]
gi|300526967|gb|EFK48036.1| folate-binding protein YgfZ [Escherichia coli MS 119-7]
gi|300531578|gb|EFK52640.1| folate-binding protein YgfZ [Escherichia coli MS 107-1]
gi|300841721|gb|EFK69481.1| folate-binding protein YgfZ [Escherichia coli MS 124-1]
gi|300846163|gb|EFK73923.1| folate-binding protein YgfZ [Escherichia coli MS 78-1]
gi|301077850|gb|EFK92656.1| folate-binding protein YgfZ [Escherichia coli MS 146-1]
gi|308122378|gb|EFO59640.1| folate-binding protein YgfZ [Escherichia coli MS 145-7]
gi|315256782|gb|EFU36750.1| folate-binding protein YgfZ [Escherichia coli MS 85-1]
Length = 305
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|283788444|ref|YP_003368309.1| tRNA-modifying protein [Citrobacter rodentium ICC168]
gi|282951898|emb|CBG91616.1| tRNA-modifying protein [Citrobacter rodentium ICC168]
Length = 326
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV L + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYIQGQVTADVSQLTEQQHVLAAHCDAKGKMWSPLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
E +E RS R+S + +L Y + S V+I ++
Sbjct: 79 GEGFAWIE-RRSLRESQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANLFGELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
++ + T + ERF + A+ L + G E ++ + + L I
Sbjct: 138 DAEKPVTRDGATTVLWFAHPAERFLLVTDAATAETLCEKLRGEAE--LNNSQQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 196 AGIPVIDA-ANSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGK 254
Query: 211 DD-LPPSGSPI 220
+P +G +
Sbjct: 255 ASRVPEAGEDL 265
>gi|27364925|ref|NP_760453.1| putative aminomethyltransferase [Vibrio vulnificus CMCP6]
gi|81448625|sp|Q8DC85|YGFZ_VIBVU RecName: Full=tRNA-modifying protein ygfZ
gi|27361071|gb|AAO09980.1| Predicted aminomethyltransferase [Vibrio vulnificus CMCP6]
Length = 324
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLETDQVTWGGHCDAKGKLWSVFRLFHYADGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH-------------TF 110
+L+ D+S D + +L Y + + V I + + GV ++ TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144
Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ + + +R+ + A+ D + I F +
Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPA-FAQNE 203
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ ++GT + I +
Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGTIAPSAPETTISL-E 262
Query: 225 IEIG 228
+G
Sbjct: 263 RSVG 266
>gi|117619784|ref|YP_855333.1| chain A, Ygfz protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561191|gb|ABK38139.1| chain A, Ygfz Protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 301
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 83/232 (35%), Gaps = 15/232 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L++ + + G+ +LQ +T DV L P+GK+ F + +
Sbjct: 11 TLFPLTDLAITSLSGQDRAKYLQGQVTCDVNALQPGQHTLGGHCDPKGKLWSDFRLLCLS 70
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------------QEHT 109
D ++ S + +L + + + V I V ++ QE
Sbjct: 71 -DRLLMLTKPSVLARQLPELKKFAIFAKVEISENHGQAVGVAGQGTDGWIAGQYGLQESG 129
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ +L+ + + L I GI P
Sbjct: 130 LIEGGMAVRVEADRWLLVSEQPLALSLPSGPESLWWGLEIKAGIPHLEA-VHQGEYIPQM 188
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPI 220
+ L+GIS TKGCY+GQE V+R ++R + +++GT P SG +
Sbjct: 189 LNLQALDGISFTKGCYMGQETVARAKYRGANNRALFVLSGTATTPVASGDTL 240
>gi|313500349|gb|ADR61715.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 313
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVP-EGN 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQE 107
++L + D+ + L Y + S + + G+ +
Sbjct: 67 GYLLAMASELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLFVPAAAG 126
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
T + I S V L E + + + +I GI
Sbjct: 127 STVRHDGLIAIAVSAGRVELWVPAADAEPVHQALAAALPEGTLNDWLLGQIRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G
Sbjct: 186 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPG 245
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHA 250
+ I + +G + + G + LA+ + V+
Sbjct: 246 AEIFSPTHGSSVGEVVIAAGNGTGCELLAVLSAEAVEDG 284
>gi|301027408|ref|ZP_07190745.1| folate-binding protein YgfZ [Escherichia coli MS 69-1]
gi|300394916|gb|EFJ78454.1| folate-binding protein YgfZ [Escherichia coli MS 69-1]
Length = 295
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+S + +L Y + S VII ++
Sbjct: 63 WIE-RRSVRESQLTELKKYAVFSKVIIAPDDERVLLGVAGFQARAALANIFSELPSKEKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++TG+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|327484963|gb|AEA79370.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Vibrio cholerae LMA3894-4]
Length = 323
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDESVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|163749105|ref|ZP_02156355.1| hypothetical protein KT99_19729 [Shewanella benthica KT99]
gi|161331175|gb|EDQ02064.1| hypothetical protein KT99_19729 [Shewanella benthica KT99]
Length = 297
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 61/299 (20%), Positives = 107/299 (35%), Gaps = 48/299 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G+ F+ +T D+ +L R A P+GK+L F + ED I+ +
Sbjct: 1 MSVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAL-EDALIMMMPS 59
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----- 126
+ +L Y + S + ++L E ++++ERF AD
Sbjct: 60 DTLALDLTQLAKYAVFSKADLVDVTDKFLLLGVAGEQA---QAWVNERFGPADNTSIDKE 116
Query: 127 ------------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
+ D + L I G +
Sbjct: 117 VTVIAGGLLLKDNDRFIIVMDKEAAAPLLTSINQEIVDATAWQALEIQSGYPNLAASH-Q 175
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSP 219
S P + +NGIS KGCY+GQE ++R+++R ++ I++GT +
Sbjct: 176 SKFVPQMCNLQGINGISFQKGCYMGQETIARMKYRGGNKRALYILSGTSSETVSLETRLE 235
Query: 220 ILTDD--IEIGTL--GVVVGKKAL--AIARIDKVDHAI-----KKGMALTVHGVRVKAS 267
+ DD + GT+ V G + L A+ D D A + +LT+ +
Sbjct: 236 LALDDGFKKTGTIIELVQSGDQVLLTAVLPNDTADSAKLRIAGDETSSLTIKPLPYSLE 294
>gi|331674383|ref|ZP_08375143.1| tRNA-modifying protein YgfZ [Escherichia coli TA280]
gi|331068477|gb|EGI39872.1| tRNA-modifying protein YgfZ [Escherichia coli TA280]
Length = 326
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVRKPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGN 254
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + ++++G G LA +++
Sbjct: 255 ASRLPEAGEDL---ELKMGENWRRTGTV-LAAVKLED 287
>gi|88797936|ref|ZP_01113523.1| hypothetical protein MED297_00830 [Reinekea sp. MED297]
gi|88779133|gb|EAR10321.1| hypothetical protein MED297_00830 [Reinekea sp. MED297]
Length = 280
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 39/290 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLY--FLIS 58
+ LS+ S I++ G + FLQ T D+ L +G+++ ++
Sbjct: 4 LQHCQLSHLSAIQLSGSDTLNFLQGQSTQDIKRLALNTPVAGGFCNVKGRLISTVQMVLV 63
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQ-----------------PINGV 100
E +L +R+ ++L L Y L + + Q
Sbjct: 64 SQEPTQVLLIGERTGLEALSAHLKKYAPLFRKMTFDDQLDRLQFFGGYQQDKQTSGETVT 123
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
V+ W Q +I E+ D T I S Y ++ +D
Sbjct: 124 VVPWGQNRVL----YITEQPDATDFPPTETL-----IPSSEWAYQDVLDQILWLDGTQ-- 172
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+ P + +D L+G+S KGCY GQEVV+R+ ++ +KR +T T D P + +
Sbjct: 173 -SAAWIPQNVSLDALDGVSFKKGCYTGQEVVARLHYKGQSKKRLFRLTFTADQSPDETDV 231
Query: 221 LTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G + ALA+ + DK A+ G V V+
Sbjct: 232 FAGTTRVGEVIQTAVHNGQGAALAVLKTDKTGEAMTLGEN---RQVPVEL 278
>gi|297581095|ref|ZP_06943020.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297534921|gb|EFH73757.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 323
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S S S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDSVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPKRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|171463581|ref|YP_001797694.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193119|gb|ACB44080.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 335
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 95/268 (35%), Gaps = 37/268 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI----------ARGSAILTPQGKIL 52
+ L+ I + G A FLQ +T VL L R +P+G++L
Sbjct: 19 ACNLAEWGLIIIEGPDAASFLQNQLTNSVLGLTLTQLGSVAQGFSSTRLVGYCSPKGRLL 78
Query: 53 LYFLI-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQ 106
I D + L I + S +L + LRS V I++ V +
Sbjct: 79 ASAWIGLFSSVDSSHDRYALFISKDIAASTAKRLSMFVLRSKVKVIDLSDSWTVAGVYGP 138
Query: 107 EHTFSNSSFIDE----RFS---IADVLLHRTWGHNEKIASD--------IKTYHELRINH 151
+ ++S+F D+ R + LL R + ++EL +
Sbjct: 139 NNQITSSNFNDQSMALRLPDVLVGSNLLARIVMAYPNQDQADTPESREILDAWNELEVLS 198
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-- 209
I P + + G+ KGCY GQE+V+R Q+R I++R +
Sbjct: 199 AIPRIVA-ATQEQFVPQMINFESVTGVDFKKGCYPGQEIVARSQYRGSIKRRLQLAHVIG 257
Query: 210 ---TDDLPPSGSPILTDDIEIGTLGVVV 234
+ L G+ + G+VV
Sbjct: 258 NHEDNKLTLPGAELFHSADSGQPAGMVV 285
>gi|82778336|ref|YP_404685.1| putative global regulator [Shigella dysenteriae Sd197]
gi|118577996|sp|Q32BW1|YGFZ_SHIDS RecName: Full=tRNA-modifying protein ygfZ
gi|81242484|gb|ABB63194.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 326
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 35/251 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLQAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------- 105
+ +E RS R+ + +L Y + S V I ++
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 137
Query: 106 ---------QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
T ERF + A++L + G E ++ + + L I
Sbjct: 138 SKEKQVVREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE+V+R + R ++ ++ G+
Sbjct: 196 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGS 254
Query: 211 DD-LPPSGSPI 220
LP +G +
Sbjct: 255 ASRLPEAGEDL 265
>gi|315289438|gb|EFU48833.1| folate-binding protein YgfZ [Escherichia coli MS 110-3]
gi|315295687|gb|EFU55007.1| folate-binding protein YgfZ [Escherichia coli MS 16-3]
Length = 305
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|229514097|ref|ZP_04403559.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TMA 21]
gi|229349278|gb|EEO14235.1| predicted aminomethyltransferase related to GcvT [Vibrio cholerae
TMA 21]
Length = 339
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 39 LTHLTGWGAITLVGTDKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 97
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 98 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 157
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 158 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNTWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 216
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 217 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 276
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 277 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 304
>gi|183179722|ref|ZP_02957933.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013133|gb|EDT88433.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 323
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSDTTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|153214509|ref|ZP_01949418.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153826896|ref|ZP_01979563.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|254291672|ref|ZP_04962460.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|124115311|gb|EAY34131.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|149739259|gb|EDM53521.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150422444|gb|EDN14403.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 323
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|15642468|ref|NP_232101.1| hypothetical protein VC2472 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590986|ref|ZP_01678305.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|227082593|ref|YP_002811144.1| hypothetical protein VCM66_2395 [Vibrio cholerae M66-2]
gi|254849597|ref|ZP_05238947.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10]
gi|255746858|ref|ZP_05420803.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera
CIRS 101]
gi|262162023|ref|ZP_06031039.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1]
gi|298500172|ref|ZP_07009977.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|81544421|sp|Q9KPA1|YGFZ_VIBCH RecName: Full=tRNA-modifying protein ygfZ
gi|254814152|sp|C3LR15|YGFZ_VIBCM RecName: Full=tRNA-modifying protein ygfZ
gi|9657051|gb|AAF95614.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547163|gb|EAX57292.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|227010481|gb|ACP06693.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|254845302|gb|EET23716.1| tRNA-modifying protein ygfZ [Vibrio cholerae MO10]
gi|255735260|gb|EET90660.1| predicted aminomethyltransferase related to GcvT [Vibrio cholera
CIRS 101]
gi|262028272|gb|EEY46929.1| glycine cleavage T-protein [Vibrio cholerae INDRE 91/1]
gi|297540865|gb|EFH76919.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 323
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|118577999|sp|Q7MHM7|YGFZ_VIBVY RecName: Full=tRNA-modifying protein ygfZ
Length = 324
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYGDGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQE-------------HTF 110
+L+ D+S D + +L Y + + V I + + GV ++ TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVATF 144
Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ + + +R+ + A+ D + I F +
Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVSPRIPA-FAQNE 203
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I +
Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIEPSAPETTISL-E 262
Query: 225 IEIG 228
+G
Sbjct: 263 RSVG 266
>gi|253687038|ref|YP_003016228.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259710252|sp|C6D8Y4|YGFZ_PECCP RecName: Full=tRNA-modifying protein ygfZ
gi|251753616|gb|ACT11692.1| folate-binding protein YgfZ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 333
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + G + +LQ +TADV L A +GK+ +
Sbjct: 26 TLISLDDWALATMVGPDTVKYLQGQVTADVSALADDRHILCAHCDAKGKMWSNLRLFHHG 85
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101
E +E R+ RD+ + +L Y + S I ++
Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDNAVLLGAAGAGIRELLASAFSQLPD 144
Query: 102 ----LSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ ++ T + + ERF L G + +D + + L I G
Sbjct: 145 ADHPVVQHEGATLLHFAHPAERFLLVLSPEQSASLLEQLGDKVSL-NDSRQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211
++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G +
Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262
Query: 212 DLPPSGSPI 220
+P +G +
Sbjct: 263 QVPQAGDDL 271
>gi|262190699|ref|ZP_06048930.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93]
gi|262033411|gb|EEY51918.1| glycine cleavage T-protein [Vibrio cholerae CT 5369-93]
Length = 323
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLAGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAIEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTYYRFTDSIAIGL 288
>gi|212213082|ref|YP_002304018.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212]
gi|212011492|gb|ACJ18873.1| aminomethyltransferase family protein [Coxiella burnetii CbuG_Q212]
Length = 258
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 33/227 (14%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
FI V G++A FLQ +T DV + A P+G+++ F + + +D + L
Sbjct: 11 FGFILVKGENAATFLQGQLTCDVREINEIRGTLGACCDPKGRMVANFFVFQKNKDYYFL- 69
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ +S I L Y + S V + L+ N+ T +S+ ++ L
Sbjct: 70 LPKSMISITIAHLKKYAVFSKVEL---------LAVNEAET----------YSLPEITLK 110
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
D + L + G+V + P + GI+ TKGCYIGQ
Sbjct: 111 EL---------DENDWRSLNVRAGLV-WVYPQTSGKLIPQMINLQKWGGINFTKGCYIGQ 160
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
E+++R +H +++ + PP G + + T+G+VV
Sbjct: 161 EIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND--QTMGIVV 205
>gi|289628133|ref|ZP_06461087.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649901|ref|ZP_06481244.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. 2250]
gi|330871252|gb|EGH05961.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 315
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q + ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128
Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158
+ + R S L G + + S + + +I GI
Sbjct: 129 AVVRANELIAIRVSPGRAELWVLAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304
>gi|259909560|ref|YP_002649916.1| putative global regulator [Erwinia pyrifoliae Ep1/96]
gi|224965182|emb|CAX56714.1| putative global regulator [Erwinia pyrifoliae Ep1/96]
gi|283479638|emb|CAY75554.1| tRNA-modifying protein ygfZ [Erwinia pyrifoliae DSM 12163]
Length = 328
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 35/277 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G I +LQ +T DV LP +A +GK+ +
Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPPNQHSPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS D+ + +L Y + + + + + ++
Sbjct: 79 ADGLAYIE-RRSLLDNQLSELKKYAVFAKISLTADDESVLLGVAGFQARAALANLFSTLP 137
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----SDIKTYHELRINH 151
+ T S ERF + + G + +A +D + L I
Sbjct: 138 DAASPVVQQDNSTLLWFSLPAERFLLV-TTAEKAAGIADTLAGEARFNDSAQWRALDIEA 196
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + + P + L IS KGCY GQE+V+R + R ++ + G
Sbjct: 197 GLPIIDA-ATSAQFIPQATNLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKA 255
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ P + L ++++G G LA ++D D
Sbjct: 256 GVVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289
>gi|206575880|ref|YP_002236645.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342]
gi|226730801|sp|B5XUE6|YGFZ_KLEP3 RecName: Full=tRNA-modifying protein ygfZ
gi|206564938|gb|ACI06714.1| tRNA-modifying protein YgfZ [Klebsiella pneumoniae 342]
Length = 327
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 91/249 (36%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ ITADV L +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS RD + +L Y + S V I ++
Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137
Query: 102 -----LSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152
+ + ERF + + E ++ + + L I G
Sbjct: 138 DAATPVVSEDATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ P + L GIS KGCY GQE+V+R + R ++ ++GT
Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256
Query: 213 -LPPSGSPI 220
+P +G +
Sbjct: 257 RVPEAGEDL 265
>gi|320327157|gb|EFW83171.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330879268|gb|EGH13417.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 315
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q + ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDSDSALVGLGLDLAQETD 128
Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158
+ + R S L G + + S + + +I GI
Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304
>gi|153831095|ref|ZP_01983762.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873416|gb|EDL71551.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 323
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 97/272 (35%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLMNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + + GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVEGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTHYRFTDSIAIGL 288
>gi|121729911|ref|ZP_01682336.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675445|ref|YP_001217973.1| hypothetical protein VC0395_A2049 [Vibrio cholerae O395]
gi|262167302|ref|ZP_06035012.1| glycine cleavage T-protein [Vibrio cholerae RC27]
gi|172047576|sp|A5F5F3|YGFZ_VIBC3 RecName: Full=tRNA-modifying protein ygfZ
gi|121628354|gb|EAX60858.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146317328|gb|ABQ21867.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014364|gb|ACP10574.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262024277|gb|EEY42968.1| glycine cleavage T-protein [Vibrio cholerae RC27]
Length = 323
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 25/272 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTGWGAITLVGTDKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSFIDERF 120
D + + +S + + +L Y + S V I GV+ S + S +
Sbjct: 82 DGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDIALGVMGSQADAWIDTVSETTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
IA R + + + + + I + T +
Sbjct: 142 RIAGGTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVP-VVTQTAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS TKGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVL 260
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+ +G G A+ + +I G+
Sbjct: 261 ERAVGENWRSAG----ALLTYYRFTDSIAIGL 288
>gi|290511312|ref|ZP_06550681.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55]
gi|289776305|gb|EFD84304.1| tRNA-modifying protein ygfZ [Klebsiella sp. 1_1_55]
Length = 327
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ ITADV L +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------ 96
+ +E RS RD + +L Y + S V I
Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152
+ + ERF + + E ++ + + L I G
Sbjct: 138 DAAAPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ P + L GIS KGCY GQE+V+R + R ++ ++GT
Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256
Query: 213 -LPPSGSPI 220
+P +G +
Sbjct: 257 RVPEAGEDL 265
>gi|29653776|ref|NP_819468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 493]
gi|153209655|ref|ZP_01947468.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii 'MSU Goat Q177']
gi|154707625|ref|YP_001424980.1| aminomethyltransferase family protein [Coxiella burnetii Dugway
5J108-111]
gi|161830229|ref|YP_001596362.1| glycine cleavage T-protein [Coxiella burnetii RSA 331]
gi|165924115|ref|ZP_02219947.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 334]
gi|212218958|ref|YP_002305745.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154]
gi|29541039|gb|AAO89982.1| aminomethyltransferase family protein [Coxiella burnetii RSA 493]
gi|120575283|gb|EAX31907.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii 'MSU Goat Q177']
gi|154356911|gb|ABS78373.1| aminomethyltransferase family protein [Coxiella burnetii Dugway
5J108-111]
gi|161762096|gb|ABX77738.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 331]
gi|165916438|gb|EDR35042.1| glycine cleavage T-protein (aminomethyl transferase) domain protein
[Coxiella burnetii RSA 334]
gi|212013220|gb|ACJ20600.1| aminomethyltransferase family protein [Coxiella burnetii CbuK_Q154]
Length = 258
Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 33/227 (14%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
FI V G++A FLQ +T DV + A P+G+++ F + + +D + L
Sbjct: 11 FGFILVKGENAATFLQGQLTCDVREINEIRGALGACCDPKGRMVANFFVFQKNKDYYFL- 69
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ +S I L Y + S V + L+ N+ T +S+ ++ L
Sbjct: 70 LPKSMISITIAHLKKYAVFSKVEL---------LAVNEAET----------YSLPEITLK 110
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
D + L + G+V + P + GIS TKGCYIGQ
Sbjct: 111 EL---------DENDWRSLNVRAGLV-WVYPQTSGKLIPQMINLQKWGGISFTKGCYIGQ 160
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
E+++R +H +++ + PP G + + T+G+VV
Sbjct: 161 EIIARTEHLGKLKRHLYRAFVDSETPPTPGDELKNQND--QTMGIVV 205
>gi|288933622|ref|YP_003437681.1| folate-binding protein YgfZ [Klebsiella variicola At-22]
gi|288888351|gb|ADC56669.1| folate-binding protein YgfZ [Klebsiella variicola At-22]
Length = 327
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 31/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + +LQ ITADV L +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLAAHCDAKGKMWSNLRVFRR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------ 96
+ +E RS RD + +L Y + S V I
Sbjct: 79 DGGFAWIE-RRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHG 152
+ + ERF + + E ++ + + L I G
Sbjct: 138 DAAAPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGEAQLNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ P + L GIS KGCY GQE+V+R + R ++ ++GT
Sbjct: 198 LPVIDS-ANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKFRGANKRALWTLSGTAS 256
Query: 213 -LPPSGSPI 220
+P +G +
Sbjct: 257 RVPEAGEDL 265
>gi|229588983|ref|YP_002871102.1| hypothetical protein PFLU1454 [Pseudomonas fluorescens SBW25]
gi|229360849|emb|CAY47707.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 313
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 55/293 (18%), Positives = 107/293 (36%), Gaps = 34/293 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L A A T +G++ F I ++ D
Sbjct: 8 CPLSHEGVLAVRGADAAKFLQGQLTCNLNYLSDTQASLGARCTQKGRMQSSFRIL-LQGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
+L + + + L Y + S + + V +
Sbjct: 67 GVLLAMATELLEPQLADLKKYAVFSKSKLTDESAAWVRFGLANADQALSGLGLELPAETD 126
Query: 114 ------SFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
+ I R S L H + + +D+ + +I GI
Sbjct: 127 SVARTDALIAVRVSPGRAELWAPAEHADTVRSQLTERLQQADLNEWLLGQIRAGIGQVMP 186
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R ++ ++P G
Sbjct: 187 Q-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLSLNATEMPAPG 245
Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVRV 264
+P+ + + IG + + LA+ + + D L G+++
Sbjct: 246 TPLFSPSHNSAIGEVVIAAKADQSVELLAVLQAEAADSGDVHLGNLEGPGLQL 298
>gi|21231578|ref|NP_637495.1| hypothetical protein XCC2133 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768300|ref|YP_243062.1| hypothetical protein XC_1980 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991439|ref|YP_001903449.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris str.
B100]
gi|21113265|gb|AAM41419.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573632|gb|AAY49042.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733199|emb|CAP51397.1| tRNA-modifying protein [Xanthomonas campestris pv. campestris]
Length = 290
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 106/273 (38%), Gaps = 16/273 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + E+
Sbjct: 14 SLHDMQYVRLSGPDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLRDEDAQ 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV---IIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
++ + + +L + R + I + + ++ +
Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVFRRKLRITEIALTAQGAFAAPARAQAAHADVAADAIELD 133
Query: 122 IADVLLHRT--WGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ L RT ++ +A+ I + + G+V D P +D
Sbjct: 134 MGSPALPRTLVLRASDTLAAPIDLPNMDAAWRRADLQLGLVRLP-DTQREQWTPQQLALD 192
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L+ S+ KGCY GQE+V+R ++ ++ TD G + D E+G++
Sbjct: 193 QLHAFSVKKGCYPGQEIVARTHFLGKAKRAVHLLE-TDAAVAPGDAVRLDGAEVGSVVSC 251
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
ALA+ ++ AI+ GM L+ +
Sbjct: 252 AENVALAVLPLEL---AIEAGMTLSAGTSPARP 281
>gi|170720249|ref|YP_001747937.1| hypothetical protein PputW619_1063 [Pseudomonas putida W619]
gi|169758252|gb|ACA71568.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 313
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 35/297 (11%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 9 PLSHEGILAVRGSDAGKFLQGQLTCNINYLSPEQASLGARCMVKGRMQSSFRILP-EGNG 67
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------SNSSFI 116
++L + R ++ + L Y + S + + S+
Sbjct: 68 YLLAMARELLEAQLADLKKYAVFSKATLSDESAAWARFGLQGGDAALRALGLKVPTSAGA 127
Query: 117 DERFS-----IADVLLHRTWGHNEKIAS------------DIKTYHELRINHGIVDPNTD 159
ER W + AS + + +I GI
Sbjct: 128 TERHEGLIAVAVSEGRVELWVPADAAASVREKLATALPEGPLNDWLLGQIRAGIGQ-VMG 186
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGS 218
P + L+G+S KGCY GQE+V+R+Q+ +++R + D+P G+
Sbjct: 187 PTRELFIPQMINLQALDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLLLDQQDIPAPGA 246
Query: 219 PILTD--DIEIGTL----GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
I + +G + + LA+ + V+ +L +RV S P
Sbjct: 247 QIFSPTHGSSVGEVVIAATTGQSCELLAVLGAEAVEDDNLHLGSLQGPRLRVS-SLP 302
>gi|327479782|gb|AEA83092.1| aminomethyltransferase [Pseudomonas stutzeri DSM 4166]
Length = 315
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 100/281 (35%), Gaps = 36/281 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A TP+G++ F I E D
Sbjct: 8 CVLSHEGVLAVRGPDASKFLQGQLTCNLNYLDAHTSSLGARCTPKGRMQSSFRIVP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWN------QE 107
++L + + L Y + S I +G ++S +
Sbjct: 67 GYLLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIADGDGSLVSLGLDLSQAAD 126
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YHELRINHGIVDPNT 158
+ I R L E++ + + + ++ GI
Sbjct: 127 SIVRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWLLDQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPP 215
P + L G+S KGCY GQE+V+R+Q+ +++R + +LP
Sbjct: 186 GSTRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLQHLAVEGEPGELPA 245
Query: 216 SGSPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250
G + + + +G + G + LA+ + D
Sbjct: 246 PGVELFSPVHNSSVGEVVLAATSADGIELLAVVQEDAAADG 286
>gi|261820171|ref|YP_003258277.1| global regulator [Pectobacterium wasabiae WPP163]
gi|261604184|gb|ACX86670.1| folate-binding protein YgfZ [Pectobacterium wasabiae WPP163]
Length = 333
Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 35/250 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + G + +LQ +TADV L A +GK+ +
Sbjct: 26 TLISLDDWALATLVGPDTVKYLQGQVTADVGALADDRHILCAHCDAKGKMWSNLRLFHHG 85
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-------------------- 101
E +E R+ RD+ + +L Y + S I ++
Sbjct: 86 EGFAFIE-RRNLRDAQLSELKKYAVFSKTTIAPDDSAVLLGAAGAGIREQLASVFNQLPD 144
Query: 102 ----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ ++ T + + ERF LL + ++ +D + + L I
Sbjct: 145 AEHPVVQHEGATLLHFTHPAERFLLVLSSEQNAALLEQL--DDKVSLNDSRQWLTLDIEA 202
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G ++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G
Sbjct: 203 GQPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKA 261
Query: 212 D-LPPSGSPI 220
+ +P +G +
Sbjct: 262 NRVPQAGDDL 271
>gi|71275603|ref|ZP_00651888.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Dixon]
gi|71899500|ref|ZP_00681657.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|170729587|ref|YP_001775020.1| hypothetical protein Xfasm12_0376 [Xylella fastidiosa M12]
gi|71163494|gb|EAO13211.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Dixon]
gi|71730720|gb|EAO32794.1| Glycine cleavage T protein (aminomethyl transferase) [Xylella
fastidiosa Ann-1]
gi|167964380|gb|ACA11390.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 267
Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 18/269 (6%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+++ G + F A ++D L SA LTP+G++ F + + E+ +L +
Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ--------PINGVVLSWNQEHTFSNSSFIDERFSI 122
+ + +L Y R V I ++ V + Q F + +D
Sbjct: 61 DGEAVMMAPQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQFDGITELDVSGIT 120
Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+LL ++ + + + G+ + P +D LN S+
Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIGLDWLNAYSI 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY GQE+V+R ++R ++ + P G + + + +IG + V ALA
Sbjct: 180 RKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSTEGDIGQVASVAEGLALA 238
Query: 241 IARID------KVDHAIKKGMALTVHGVR 263
+ ID +V + + R
Sbjct: 239 VLPIDTEYGELRVAGTLATPLPFVAGLAR 267
>gi|300936035|ref|ZP_07150983.1| folate-binding protein YgfZ [Escherichia coli MS 21-1]
gi|300458827|gb|EFK22320.1| folate-binding protein YgfZ [Escherichia coli MS 21-1]
Length = 305
Score = 164 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 39/272 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------------ 101
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQ 121
Query: 102 LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDAANSRQ-FIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLKGSASRLP 238
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+G + ++++G G LA +++
Sbjct: 239 EAGEDL---ELKMGENWRRTGTV-LAAVKLED 266
>gi|257486552|ref|ZP_05640593.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|330989043|gb|EGH87146.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331010035|gb|EGH90091.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 315
Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q + ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128
Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158
+ + R S L G + + S + + +I GI
Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304
>gi|330446930|ref|ZP_08310581.1| folate-dependent regulatory protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491121|dbj|GAA05078.1| folate-dependent regulatory protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 327
Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 31/253 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + + + G + +LQ +T DV++L + +A +GK+ + I
Sbjct: 24 LALSKLDDWGMVTLIGPDSKAYLQGQLTCDVVSLEAGKSTLAAHCDAKGKMRTVMRLFHI 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DE 118
E L+ +S + I +L Y + S I + LS Q N+ F DE
Sbjct: 84 ENGYGYLQ-RQSVMATQIPELKKYAVFSKTDITPSDNIVLGLSGEQAQAAINAYFTEGDE 142
Query: 119 ----------RFSIADVLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157
+ + + H E IA SD + IN + D
Sbjct: 143 VRHNEIATAVKVDAQRWFIIASPEHAETIAQHFAADATFSDSTLWDLYDINAALPRVDSA 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216
T+ P + +NGIS KGCY GQE V+R ++R I ++ I+TG P +
Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVTGEATQCPQA 259
Query: 217 GSPILTDDIEIGT 229
G + + +G
Sbjct: 260 GDAL---ERSVGE 269
>gi|307579370|gb|ADN63339.1| putative aminomethyl transferase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 267
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 104/266 (39%), Gaps = 18/266 (6%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+++ G + F A ++D L SA LTP+G++ F + + E+ +L +
Sbjct: 1 MLRISGADTLSFAHAQFSSDAQGLAIGKWHWSAWLTPKGRVTALFALYRPAENELLLILP 60
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--HTFSNSSFID--ERFSIADVL 126
+ + +L Y R V I ++ +++ T + ++ +D ++ +
Sbjct: 61 DGEAVMMATQLQRYIFRRKVQIAVERNLITTATYDTPVHATGTQAAQLDGITELDVSGIT 120
Query: 127 LHR------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
L R ++ + + + G+ + P +D LN S+
Sbjct: 121 LPRRLLLVPAAAMPPRVPAFEAQWRAADLRLGLPRLDAS-QRDQWTPQQIGLDGLNAYSI 179
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY GQE+V+R ++R ++ + P G + + + +IG + V ALA
Sbjct: 180 RKGCYPGQEIVARTHFLGKAKRRAQLLAINTHVQP-GETVKSAEGDIGQVASVAEGLALA 238
Query: 241 IARID------KVDHAIKKGMALTVH 260
+ ID +V + +
Sbjct: 239 VLPIDTEYGELRVAGTLATPLPFVAG 264
>gi|298488667|ref|ZP_07006696.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156740|gb|EFH97831.1| glycine cleavage T-protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 313
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 37/295 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPIN----GVVLSWNQEHT 109
+L + + + L Y + S V +Q + G+ L+ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLAQETDAV 128
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDF 160
+ I R S L G + + S + + +I GI
Sbjct: 129 VRANELIAIRASPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VFGS 187
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSP 219
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G+
Sbjct: 188 TREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPGTA 247
Query: 220 ILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 LFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 302
>gi|330808065|ref|YP_004352527.1| hypothetical protein PSEBR_a1335 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376173|gb|AEA67523.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 103/279 (36%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L A A T +G++ F I +E D
Sbjct: 8 CTLSHEGVLAVRGVDAGKFLQGQLTCNLDYLSDSRASLGARCTQKGRMQSSFRIL-LESD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQE------ 107
++ + + + L Y + S V ++ + + E
Sbjct: 67 GVLMAMAAELLEPQLADLKKYAVFSKSKLTDESSAWVRFGLENADKALAGLGLELPDDTD 126
Query: 108 HTFSNSSFIDERFSIADVLLH---------RTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ + I R S L RT E +D+ + ++ GI
Sbjct: 127 SVARHEALIAIRVSPGRAELWAPAEQAQTLRTRLGTELAEADLNPWLLGQVRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + +LP G
Sbjct: 186 PATRELFIPQMLNLQAIGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLQLDASELPEPG 245
Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250
+ + + IG + + + LA+ + + +
Sbjct: 246 TALFSPTHGSSIGEVVIAARGEGNIELLAVLQAEAAEDD 284
>gi|311278182|ref|YP_003940413.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1]
gi|308747377|gb|ADO47129.1| folate-binding protein YgfZ [Enterobacter cloacae SCF1]
Length = 327
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 38/277 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G+ + +LQ +TADV L A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGQDSEKYLQGQVTADVAQLTEHQHLLVAHCDAKGKMWSNLRLFRQ 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFID 117
+E +E RS RD+ + +L Y + S V I + + + GV + + S +
Sbjct: 79 QEGFAWIE-RRSVRDAQLTELKKYAVFSKVAIAPNDDRVLLGVAGFQARAALANLFSQLP 137
Query: 118 ER----------------FSIADVLLHRTWGHNEKIASDI---------KTYHELRINHG 152
+R LL + E++A + + + L I G
Sbjct: 138 DRDMPAVTENDSTLLWFEHPAERFLLIVSADAAERVADALRGEAQRNNSQQWLALNIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P + L GIS KGCY GQE+V+R + R ++ + G
Sbjct: 198 LPVIDP-ANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWYLAGAAH 256
Query: 213 -LPPSGSPILTDDIEIG----TLGVVVGKKALAIARI 244
+P +G + ++++G G V+ AL R+
Sbjct: 257 RVPEAGEEL---ELKMGDNWRRTGSVLAAVALDDGRL 290
>gi|325275456|ref|ZP_08141386.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51]
gi|324099407|gb|EGB97323.1| folate-binding protein YgfZ [Pseudomonas sp. TJI-51]
Length = 313
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 100/278 (35%), Gaps = 32/278 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A A +G++ F I E +
Sbjct: 8 CPLSHEGILAVRGSDAGKFLQGQLTCNINYLSQEHAGLGARCMVKGRMQSSFRILP-EGN 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
++L + ++ + L Y + S + + + ID +
Sbjct: 67 GYLLAMASELLEAQLADLKKYAVFSKATLTDESSAWARFGLQGGEAALQALGIDLPSAAG 126
Query: 124 DVLLHRTWGHNEKIASDIKTYHELR--------INHGIVDPNT-DFLPSTI--------- 165
+ A ++ + + + + + D+L +
Sbjct: 127 STVRQAGLIAVTVSAGRVELWVAADNAEPVRQALAAALPEGSLNDWLLGQVRAGIGQVMG 186
Query: 166 ------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSGS 218
P + ++G+S KGCY GQE+V+R+Q+ +++R + +P G+
Sbjct: 187 PTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQAAVPAPGA 246
Query: 219 PILTD--DIEIGTLGVVVGKKA----LAIARIDKVDHA 250
I + +G + + A LA+ + V+
Sbjct: 247 EIFSPTHGSSVGEVVLAASNGAGCELLAVLSAEAVEDD 284
>gi|50119703|ref|YP_048870.1| putative global regulator [Pectobacterium atrosepticum SCRI1043]
gi|81646141|sp|Q6D961|YGFZ_ERWCT RecName: Full=tRNA-modifying protein ygfZ
gi|49610229|emb|CAG73672.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 333
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 93/249 (37%), Gaps = 33/249 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + G + +LQ +TADV LP A +GK+ +
Sbjct: 26 TLISLDDWALATLVGPDTVKYLQGQVTADVGALPDNGHILCAHCDAKGKMWSNLRLFHHG 85
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------PI 97
E +E R+ RD + +L Y + S I P
Sbjct: 86 EGFAFIE-RRNLRDVQLSELKKYAVFSKTAIAPDDNTILLGAAGAGIRELLASVFSQLPD 144
Query: 98 NGVVLSWNQEHTFSNSSFIDERF-----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ ++ T + + ERF L G + +D + + L I G
Sbjct: 145 AEHPVVQHEGATLLHFAHPAERFLLVLSPEPSASLLEQLGDKVSL-NDSRQWLTLDIEAG 203
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-D 211
++ + P + LNGIS +KGCY GQE+V+R ++R ++ + G +
Sbjct: 204 QPIIDS-ANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKAN 262
Query: 212 DLPPSGSPI 220
+P +G +
Sbjct: 263 KVPQAGDDL 271
>gi|70728823|ref|YP_258572.1| aminomethyl transferase [Pseudomonas fluorescens Pf-5]
gi|68343122|gb|AAY90728.1| aminomethyl transferase, putative [Pseudomonas fluorescens Pf-5]
Length = 313
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 102/279 (36%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A +G++ F I +E D
Sbjct: 8 CPLSHEGVLAVRGPDASKFLQGQLTCNLNYLSDSQSSLGARCNQKGRMQSSFRIL-LEGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-----DE 118
+L + R + + L Y + S + + + + + D
Sbjct: 67 GCLLAMARELIEPQLADLKKYAVFSKAKLADESASWARFGLADAQVALSGLGLELPEEDG 126
Query: 119 RFSIADVLLH--------------------RTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ AD L+ R + ++ + ++ G+
Sbjct: 127 SVARADGLIALRVSSQRAELWVPAERAASLRQQLAAQLPEGELNQWLLGQVRAGLGQVMP 186
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSG 217
+ P + + G+S KGCY GQE+V+R+Q+ +++R + D LP G
Sbjct: 187 E-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLALPGDALPVPG 245
Query: 218 SPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250
+ + + IG + G + LA+ + + V+
Sbjct: 246 TALFAPSHNSAIGEVVLAARAQQGVELLAVLQAEAVEGG 284
>gi|309785295|ref|ZP_07679926.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617]
gi|308926415|gb|EFP71891.1| tRNA-modifying protein ygfZ [Shigella dysenteriae 1617]
Length = 305
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 90/246 (36%), Gaps = 35/246 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G + ++Q +TADV + +A +GK+ + + +
Sbjct: 3 LDDWALATITGADSEKYMQGQVTADVSQMTEDQHLQAAHCDAKGKMWSNLRLFRDGDGFA 62
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------------- 105
+E RS R+ + +L Y + S V I ++
Sbjct: 63 WIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQ 121
Query: 106 ----QEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
T ERF + A++L + G E ++ + + L I G
Sbjct: 122 VVREGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPV 179
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LP 214
+ P + L GIS KGCY GQE+V+R + R ++ ++ G+ LP
Sbjct: 180 IDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLP 238
Query: 215 PSGSPI 220
+G +
Sbjct: 239 EAGEDL 244
>gi|166712290|ref|ZP_02243497.1| hypothetical protein Xoryp_12755 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 290
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 14/276 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 14 SLHDIQYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FS 121
++ + + +L + LR + I + E + + + +
Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVLRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLD 133
Query: 122 IADVLLHRTWG--HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ L RT E +A+ I+ + + G+ + P +D
Sbjct: 134 LGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALD 192
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V
Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSV 251
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
G ALA+ ++ A A HG R +A P
Sbjct: 252 AGNLALAVLPLELTLDADTPLQA-GAHGARPRAIAP 286
>gi|262404784|ref|ZP_06081339.1| glycine cleavage T-protein [Vibrio sp. RC586]
gi|262349816|gb|EEY98954.1| glycine cleavage T-protein [Vibrio sp. RC586]
Length = 323
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 30/288 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTAWGAITMVGADKKSYLQGQVTCNVVSLQDQQVTFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------- 113
D + + S ++ + +L Y + S V I + + +Q + + +
Sbjct: 82 DGYAMFQRCSAIEAELRELKKYAIFSKVTIAESSDIALGVMGSQANAWVDGLSEQTGDVR 141
Query: 114 ---SFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPS 163
R S LL T E+ + + + + + + T +
Sbjct: 142 RIQGGTAVRMSEQRWLLLVTPEQAEQYVNTWQGLCVEQALWTRMDVEEAVP-VVTQSTQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS +KGCY GQE V+R ++R I ++ I+ G P S +
Sbjct: 201 EHIPQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNITAPFSNEEPVIL 260
Query: 224 DIEIGTLGVVVG--------KKALAIARIDKVDHAIKKGMALTVHGVR 263
+ +G G +AI I + + +++G L +
Sbjct: 261 ERAVGEHWRSAGQLLTHYQFDDGIAIGLI-VLPNDLEEGAELRLASQP 307
>gi|299470070|emb|CBN79247.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 376
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/326 (21%), Positives = 116/326 (35%), Gaps = 88/326 (26%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK---IARGSAILTPQGKILLYFLISK 59
+ L ++ +++ G A LQ ++T D+ L + +A L P+G+++ L+++
Sbjct: 6 AAVLEGRAVLEISGVDAKALLQGLMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTR 65
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNS 113
+K L YKLRS V I+ ++GV W
Sbjct: 66 SPR-------HEAKGKPL------YKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGG 112
Query: 114 S--------------------FIDERFSIADVLLHRTWGHNEKIASDIKT---------Y 144
F D R + V L R +D Y
Sbjct: 113 DVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGPDGADWPDGDPVVPEGRY 172
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
H LR+ +G+ + + P ++ +DLL IS TKGCY+GQE+ +R Q + +RKR
Sbjct: 173 HALRMANGVGEGSELL---DSIPLESNLDLLGSISFTKGCYVGQELTARTQFKGFVRKRV 229
Query: 205 MIITGTDDL-----------------------------PPSGSPILTDDIEIGTLGVVVG 235
+ + + P +GS ++ E G LG +V
Sbjct: 230 LPVLFPEGAQTSFDPSAASDEGERQGLLLSRWGGVAAPPEAGSKVVDRAAEDGRLGALVS 289
Query: 236 -----KKALAIARIDKVDHAIKKGMA 256
LA+ R+ KV G
Sbjct: 290 VSPEYNVGLAMLRLGKVLSPASGGTD 315
>gi|269140276|ref|YP_003296977.1| glycine cleavage T protein [Edwardsiella tarda EIB202]
gi|267985937|gb|ACY85766.1| glycine cleavage T protein [Edwardsiella tarda EIB202]
gi|304560103|gb|ADM42767.1| Folate-dependent protein [Edwardsiella tarda FL6-60]
Length = 332
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 87/250 (34%), Gaps = 35/250 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I V G A +LQ +TADV L QGK+ + +
Sbjct: 20 LTLMRLDDWLPINVSGPDAQSYLQGQLTADVPALAATQHTLCGHCDAQGKLWSSLRLLRR 79
Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ T++L RS +L Y + + V I V+L I R
Sbjct: 80 GDGFTYLLR--RSVATLQTLELKKYAVFAKVSIA-SDEAAVLLGVAGAQASEALGAIFPR 136
Query: 120 FSIADV---------LLHRTWGHNEKI---------------------ASDIKTYHELRI 149
AD LL+ W + +D + L I
Sbjct: 137 LPDADAPLLQDGRSHLLYLAWPQPRYLLICDDADEAERICTPLAVHARLADSAQWLALDI 196
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GI + P + L GIS +KGCY GQE+V+R ++R R+ + G
Sbjct: 197 EAGIP-LIDEPSCDRFLPQAVNLQALGGISFSKGCYSGQEMVARAKYRGANRRALFWLRG 255
Query: 210 TDDLPPSGSP 219
+ + P S
Sbjct: 256 SAERLPHASE 265
>gi|84390094|ref|ZP_00991356.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01]
gi|84376748|gb|EAP93623.1| hypothetical protein V12B01_07915 [Vibrio splendidus 12B01]
Length = 323
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITIIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109
+ L +S + + ++ Y + S + IE Q ++ + + T
Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKIDIEQTSDVVIGIMGTSANQYVDSIAEGQGKVRT 142
Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
S + + D R+++ A+ L+ + EK++ + YHE I+D +
Sbjct: 143 ISGGTAVQVSDNRWALLVTEEAAESLV--SSSSAEKVSEALWQYHE------ILDAQPNL 194
Query: 161 ---LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ P + + GIS +KGCY GQE V+R ++R + ++ I++GT S
Sbjct: 195 SKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTTSDVLSL 254
Query: 218 SPILTDDIEIGT 229
+ + +G
Sbjct: 255 ENTIELERSVGE 266
>gi|262273721|ref|ZP_06051534.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886]
gi|262222136|gb|EEY73448.1| glycine cleavage T-protein [Grimontia hollisae CIP 101886]
Length = 326
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 35/273 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S + L + + I G+ IP+LQ +T D+++L + +A +GK+ I
Sbjct: 24 LSVIALDHLALITAVGQDTIPYLQGQLTCDLVSLEKTRSTLAAHCDAKGKVWSAIRIFHH 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++ S + + ++ Y + S + + ++ + + S FI E
Sbjct: 84 GNGVAYVQ-PASVAEKQLAEIKKYAVFSKTEFTLSEQVLIGIAGEKANNAVESRFIGEGD 142
Query: 121 --SIADVLLHRTWGHNEKIA-------------------SDIKTYHELRINHGIVDPNTD 159
R G+ +A SD + L + + D
Sbjct: 143 VRPTQTGTAVRIDGNRWLLAIDKEEADTLITELGERATLSDNALWTLLDLRAALP-AIED 201
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + L+GIS KGCY GQE V+R ++R I ++ ++ G + P
Sbjct: 202 ATTNEFIPQALNLQALDGISFKKGCYTGQETVARAKYRGINKRATYLLQGKAEDAPKAGD 261
Query: 220 ILTDDIEIG----TLGVVV------GKKALAIA 242
+ D +G T G V+ +ALA+
Sbjct: 262 VF--DRSVGENWRTGGTVLTGYRFEDGQALALV 292
>gi|226294152|gb|EEH49572.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1192
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 70/282 (24%)
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTF------- 110
+ +++E+D+++ +L+ L +KLRS + + + WN+E
Sbjct: 871 TPDLAYLIEVDKNEVTNLLKHLRKHKLRSKLAFRAMDDGELYVYGLWNEEDADLLTEYDI 930
Query: 111 -------SNSSFIDERFSIADVLL--------HRTWGHNEKIASDIKTYHELRINHGIVD 155
+ D R L + E++ D TY+ RI HG+ +
Sbjct: 931 ELENGKSPPFTCTDTRAPGFGFRLLAPEKVVNEQPIMPGERV--DFATYNLRRILHGVPE 988
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---- 211
+ + + P + MD++ I KGCY+GQE+ R HR ++RKR + + D
Sbjct: 989 GQGEIIRESALPLECNMDIMGAIDFHKGCYVGQELTIRTHHRGVVRKRILPVRFYDINDP 1048
Query: 212 ---------------DLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDKVD---- 248
LPP+G+ I G VG LA+ R++ +
Sbjct: 1049 MPTTDTPDYSSESKLTLPPAGANISKVSSRKGRSAGKFLSGVGNIGLALCRLEMMTDISF 1108
Query: 249 -----------------HAIKKGMALTVHGVRVKASFPHWYK 273
A +G ++VKA P W +
Sbjct: 1109 TEESSQYNPDQEFMISWDADAEGGVERAGELKVKALVPPWTR 1150
>gi|71735285|ref|YP_276095.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71555838|gb|AAZ35049.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 315
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E +
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGN 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q + ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128
Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158
+ + R S L G + + S + + +I GI
Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304
>gi|320155310|ref|YP_004187689.1| Fe/S cluster synthesis/repair in oxidative stress protein [Vibrio
vulnificus MO6-24/O]
gi|319930622|gb|ADV85486.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Vibrio vulnificus MO6-24/O]
Length = 324
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 24/244 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N I + G +LQ +T DV++L +GK+ F + +
Sbjct: 26 LDNLGLITMTGNDKKSYLQGQVTCDVVSLEADQVTWGGHCDAKGKLWSAFRLFHYADGYA 85
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEH-------------TF 110
+L+ D+S D + +L Y + + V I + + GV ++ TF
Sbjct: 86 MLQ-DKSAIDVELRELKKYAVFAKVEINVSDAILLGVCGVQAEQAIAKLTNNAEAAVVTF 144
Query: 111 SNSSFI---DERFSI---ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ + + +R+ + A+ D + I F +
Sbjct: 145 AQGTAVKISPQRWLLVVDANQQDEVLAMLATAPLCDHALWDLYDILEVAPRIPA-FAQNE 203
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P + +NGIS KGCY GQE V+R ++R I ++ ++G + + I +
Sbjct: 204 HIPQAVNLQAVNGISFKKGCYTGQETVARAKYRGINKRALYRLSGAIAPSTTETTISL-E 262
Query: 225 IEIG 228
+G
Sbjct: 263 RSVG 266
>gi|226943486|ref|YP_002798559.1| ygfZ-like protein [Azotobacter vinelandii DJ]
gi|226718413|gb|ACO77584.1| ygfZ-like protein [Azotobacter vinelandii DJ]
Length = 315
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + A TP+G+++ F + + D
Sbjct: 10 CPLRHEGVLAVRGPDADKFLQGQVTCNLDYLKDGSSSLGARCTPKGRMVSSFRLLP-DRD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----------------VLSWNQE 107
F+L + + +L + S + + VL
Sbjct: 69 GFLLAMASELIEPQQTELKKFAAFSKSQLIDESGAWCRFGLLGDDAALAALDLVLPQEAG 128
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
N R L E + + ++++ +I GI
Sbjct: 129 RVVRNGELAAIRLESGRAELWAPAEQAEALHTRLAGHLPEAPLESWLLAQIRAGIGQ-VY 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + + P G
Sbjct: 188 GATRELFIPQMINLQAVGGVSFKKGCYSGQEIVARMQYLGKLKRRLYRLALPGAEAPAPG 247
Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250
+ + + +G + + G + LA+ + D V+
Sbjct: 248 TELFSPVHRTSVGEVVLAAPAENGVELLAVLQEDAVEDG 286
>gi|260771932|ref|ZP_05880850.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14]
gi|260613224|gb|EEX38425.1| glycine cleavage T-protein [Vibrio metschnikovii CIP 69.14]
Length = 323
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 23/245 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + I V G + P+LQ +T +V+ LP + A +GK+ F + D
Sbjct: 24 TNLEQWAAIYVSGIDSKPYLQGQLTCNVVALPAQQMVYGAHCDAKGKVWSAFRLFH-HRD 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---- 119
+ + S D + +L Y + S V IE Q + + ++ + F D R
Sbjct: 83 GYAMFQPASAVDVELRELKKYAIFSKVAIE-QSQDVALGLLGKQAELRLNQFNDCRDDVR 141
Query: 120 ----------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
I + + + + I + D +
Sbjct: 142 VLEQGTAVKISAQRWLLLIKPDSVEALLESMPAQRVNSEIWTRFEIQEALPIVTQD-QQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + L GIS KGCY GQE V+R ++R I ++ ++ G P + +
Sbjct: 201 EHIPQALNLQALGGISFNKGCYTGQETVARAKYRGINKRALCLVAGDIHQPLNADQSIEL 260
Query: 224 DIEIG 228
+ +G
Sbjct: 261 ERAVG 265
>gi|271499205|ref|YP_003332230.1| folate-binding protein YgfZ [Dickeya dadantii Ech586]
gi|270342760|gb|ACZ75525.1| folate-binding protein YgfZ [Dickeya dadantii Ech586]
Length = 326
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 31/248 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L + + + + G + +LQ +TADV L A +GK+ +
Sbjct: 19 TLMSLDDWALVTLAGPDTVKYLQGQLTADVNALQAGEQVLCAHCDAKGKMWSTVHLFHYG 78
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN------------------------VIIEIQPI 97
+ LE RS RDS + +L Y + S + + P
Sbjct: 79 DGLAYLE-RRSVRDSQLAELKKYAVFSKTTLTADDSVVLLGAAGDNIRHHLAALFDTLPD 137
Query: 98 NGVVLSWNQEHTFSNSSFIDERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ + T + S ERF + + +D + + L I G
Sbjct: 138 TDNAVVHHPGATLVHLSQPAERFVLVLDAQRAAVVIDALQAQITRNDSRQWLALEIEAGR 197
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
++ + P + L GIS TKGCY GQE+V+R ++R ++ + G+
Sbjct: 198 PVIDS-ANSAQFIPQATNLQALQGISFTKGCYAGQEMVARAKYRGANKRALYWLAGSGAQ 256
Query: 213 LPPSGSPI 220
P G +
Sbjct: 257 TPAVGDEL 264
>gi|58258597|ref|XP_566711.1| mitochondrion protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106693|ref|XP_777888.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74687704|sp|Q5KP91|CAF17_CRYNE RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|50260588|gb|EAL23241.1| hypothetical protein CNBA3570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222848|gb|AAW40892.1| mitochondrion protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 375
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/327 (17%), Positives = 106/327 (32%), Gaps = 76/327 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L+++S +++ G A FL+ + DV L S L G++L + ++
Sbjct: 7 AHLAHKSVLELSGPDAQKFLKGLSCKDVEYLAGG---YSGFLNASGRVLHTAFVFPRSKN 63
Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-------------- 106
++++ E L L +KLRS V I ++ +W
Sbjct: 64 SYLITHESPEDHPAPLTSLLPPFKLRSKVRIKDVTSQWDAWSAWGSDLQGGPSPIRTWKM 123
Query: 107 ------------EHTFSNSSFIDER---------FSIADVLLHRTWGHNEKIAS-----D 140
E + D+ + L G +A+ +
Sbjct: 124 GSGGASESHWDWEGGVRDLGLRDDEVGCWDLRAGWPHMGRQLLIPKGEKPSLATSHDLGN 183
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ Y R+ G+ + T+ LP P ++ MD+ G+ KGC++GQE+ R H
Sbjct: 184 MDDYELHRMLLGVPEGPTEILPGHALPLESCMDIHGGVDFRKGCFLGQELTVRTYHTGAT 243
Query: 201 RKRPMIITG------------------------TDDLP------PSGSPILTDDIEIGTL 230
RKR + + P P S G +
Sbjct: 244 RKRILPVRLIPLDQTSSSSISDLLSSSPQQSLDEVSTPLDITYHPPSSSATRKPRSAGKI 303
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMAL 257
+ LA+ R++ + G L
Sbjct: 304 LSLHNAVGLALVRLEMAERCWWSGDIL 330
>gi|225024513|ref|ZP_03713705.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC
23834]
gi|224942664|gb|EEG23873.1| hypothetical protein EIKCOROL_01388 [Eikenella corrodens ATCC
23834]
Length = 285
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 100/278 (35%), Gaps = 15/278 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L +V G A FL + ++ +L L A + +P+G++L L+ +
Sbjct: 3 TLCKLPFFGVAEVSGADAAEFLHSQLSNHILDLQPGEACFATYNSPRGRVLANMLVLRRA 62
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDER 119
D F+L + ++ I +L + LRS + V + ++ F E
Sbjct: 63 -DRFLLVMAADLLEATIKRLRMFVLRSKTVFHTDSAWQVYGQSGADTGVDAAALKFAAEE 121
Query: 120 FSIADVLLHRTWGH------NEKIASDIKTYHELRINHGIVDPNTDFLP---STIFPHDA 170
++L G+ +D E I+ +
Sbjct: 122 GDNGLIMLVLAGGNRMVLSPAPLPDADYPAAAEAWQAAEILQGRPWISQPTMESSVAQML 181
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
LL G+ KGCY GQE+++R Q+R +R+ + + GS + D E+G +
Sbjct: 182 NQHLLGGVHFKKGCYPGQEIIARAQYRGQVRRGMAVCRSAMPV-AVGSKVEADGEEVGIV 240
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
A+ + + H G AL G ++
Sbjct: 241 INSAAYDG-AVVLLAVIKHG-AAGKALQAGGQALQTLK 276
>gi|312171240|emb|CBX79499.1| tRNA-modifying protein ygfZ [Erwinia amylovora ATCC BAA-2158]
Length = 328
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 33/276 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G I +LQ +T DV LP+ R +A +GK+ +
Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
+E RS D +++L Y + + + + P
Sbjct: 79 AGGMAYIE-RRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG----HNEKIASDIKTYHELRINHG 152
+ + T ER+ + E +D + L I G
Sbjct: 138 DAESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + P A + L+ IS KGCY GQE+V+R + R ++ + G
Sbjct: 198 WPIIDA-ATSAQFIPQAANLQALDAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKAG 256
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ P + L ++++G G LA ++D D
Sbjct: 257 VVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289
>gi|320325557|gb|EFW81619.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. glycinea str. B076]
Length = 315
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + + T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGSRCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q + ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESAEWVRFGLQDGDSALVGLGLDLAQETD 128
Query: 114 SFIDE------RFSIADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNT 158
+ + R S L G + + S + + +I GI
Sbjct: 129 AVVRANELIAIRVSPGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VF 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R +T ++++P G
Sbjct: 188 GSTREEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPG 247
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + +G + + + LA+ + D ++ +G AL + +
Sbjct: 248 TALFSPVHASAVGNVVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 304
>gi|321249108|ref|XP_003191342.1| mitochondrion protein [Cryptococcus gattii WM276]
gi|317457809|gb|ADV19555.1| Mitochondrion protein, putative [Cryptococcus gattii WM276]
Length = 375
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 61/327 (18%), Positives = 108/327 (33%), Gaps = 76/327 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+LS++S +++ G A FL+ + DV L S L G++L I ++
Sbjct: 7 AHLSHKSVLELSGPDAQKFLKGLSCKDVEYLGGG---YSGFLNASGRVLHTAFIFPRSKN 63
Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ-------------- 106
++++ E L+ L +KLRS V I ++ +W
Sbjct: 64 SYLITHESPEDHPAPLLSLLPPFKLRSKVRIKDVTNQWDAWSAWGSDLQGGPHPIRTWKM 123
Query: 107 ------------EHTFSNSSFIDER---------FSIADVLLHRTWGHNEKIAS-----D 140
E + D+ + L G +A+ +
Sbjct: 124 GSGGASESHWDWEGGIRDLGLRDDEAGCWDLRAGWPRMGRQLLVPKGEKPSLATSHDLGN 183
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ Y R+ G+ + + LP P ++ MD+ G+ KGCY+GQE+ R H
Sbjct: 184 VHDYELHRMLLGVPEGPKEILPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 243
Query: 201 RKRPMIIT------------------------GTDDLP------PSGSPILTDDIEIGTL 230
RKR + I D+P P + G +
Sbjct: 244 RKRILPIRLIPLDQSSSSSISDLLSFSPQQSLAEVDIPLDITYHPPSTSATRKPRSAGKI 303
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMAL 257
+ LA+ R++ + G L
Sbjct: 304 LSLHNAVGLALVRLEMAERCWWSGDIL 330
>gi|77457584|ref|YP_347089.1| glycine cleavage T protein [Pseudomonas fluorescens Pf0-1]
gi|77381587|gb|ABA73100.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 108/302 (35%), Gaps = 39/302 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L A A T +G++ F I +E D
Sbjct: 8 CTLSHEGVLAVRGADAGKFLQGQLTCNINYLSETQASLGARCTQKGRMQSSFRIV-LEGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFS-- 111
+L + + + + L Y + S V + + + S E
Sbjct: 67 GVLLAMAGALLEPQLADLKKYAVFSKSKLTDESASWVRFGLDHGDAALSSLGLELPAETD 126
Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
+ I R S L + + +++ + +I GI
Sbjct: 127 SVARHEGLIAIRVSPNRAELWVPADQADTVKGKLCAQLTEAELNQWLLGQIRAGIGQ-VM 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + +LP G
Sbjct: 186 PSTRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRVKLDAAELPEPG 245
Query: 218 SPILTD--DIEIGTLGVVVGKKA----LAIARIDKVDH-----AIKKGMALTVHGVRVKA 266
+ + IG + + + LA+ + + + +G AL + + +
Sbjct: 246 TALFAPSHGSSIGEVVLAARTEKNIELLAVLQAEAAEAGDLHLGSAEGPALHLLDLPYEL 305
Query: 267 SF 268
Sbjct: 306 DR 307
>gi|292487135|ref|YP_003530005.1| tRNA-modifying protein ygfZ [Erwinia amylovora CFBP1430]
gi|292900483|ref|YP_003539852.1| aminomethyl transferase (glycine cleavage system T-protein)
[Erwinia amylovora ATCC 49946]
gi|291200331|emb|CBJ47459.1| putative aminomethyl transferase (putative glycine cleavage system
T-protein) [Erwinia amylovora ATCC 49946]
gi|291552552|emb|CBA19597.1| tRNA-modifying protein ygfZ [Erwinia amylovora CFBP1430]
Length = 328
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 33/276 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G I +LQ +T DV LP+ R +A +GK+ +
Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPHSQHRPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
+E RS D +++L Y + + + + P
Sbjct: 79 AGGMAYIE-RRSLLDKQLNELKKYAVFAKISLTADEGSVLLGVAGFQARAALANLFSTLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG----HNEKIASDIKTYHELRINHG 152
+ + T ER+ + E +D + L I G
Sbjct: 138 DAESPVIQQGDSTLLWFDLPAERYLLVTTTAKAAEIAEKLAGEAQLNDSAQWLALDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + P A + L IS KGCY GQE+V+R + R ++ + G
Sbjct: 198 WPIIDA-ATSAQFIPQAANLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGKAG 256
Query: 213 LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ P + L ++++G G LA ++D D
Sbjct: 257 VVPLANEAL--EMKMGENWRRTGTI-LAACQLDNGD 289
>gi|145509709|ref|XP_001440793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408021|emb|CAK73396.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 37/274 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L N+S + + G+ LQ I T D+ + + L G+++L L+ + D
Sbjct: 9 ARLDNRSIVSIKGREVCEILQGITTNDLRQIQQSQSTL--FLNTNGRVILIVLLWQYCND 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------NGVVLS--- 103
++ID+ + SLI+ + + +R V I G ++
Sbjct: 67 EIWMDIDKEIKSSLINHIKKFLIRKKVQITDYEDQLHVFQVYGPQVKLSNKEGEAITDPN 126
Query: 104 --WNQEHTFSNSSFIDERFSIADVLLH----RTWGHNEKIASDIKTYHELRINHGIVDPN 157
+ E + N +D R S + + N+ D+ + R+ I +
Sbjct: 127 NDLSDEGDYRNLVAVDPRSSSIGIRMVTNEMPDLKENDIQVQDLAHFEISRLTEAIFEGK 186
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
P D N I+LTKGCY+GQE+ +R H +IRKR + + +
Sbjct: 187 EVVNK---IPFQVNFDFWNSINLTKGCYVGQELTARTYHTGVIRKRLLPFKVVSNNNTTN 243
Query: 218 SP---ILTDDIEIGTLGVVVGKKALA---IARID 245
I + E+G + +A ID
Sbjct: 244 LEDQIINNGEQEVGKVVKSSNNFGIANVNYLDID 277
>gi|116205227|ref|XP_001228424.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51]
gi|88176625|gb|EAQ84093.1| hypothetical protein CHGG_10497 [Chaetomium globosum CBS 148.51]
Length = 517
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 63/329 (19%), Positives = 104/329 (31%), Gaps = 98/329 (29%)
Query: 17 KSAIPFLQAIITADV-----------LTLPYKIARGSAILTPQGKILLYFLISKIEEDT- 64
A +LQ +ITA++ L +A LT QG+ L I + DT
Sbjct: 206 PDAAKYLQGVITANLFPGYAGPIPTSEHLRSDAGFYAAFLTAQGRTLHDVFIYRDARDTA 265
Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+++E+D ++ D L + +KLR+ + + E T +
Sbjct: 266 HPPGHSWLVEVDAAEADRLQKHICRHKLRAKFDVRLLDE--------GEGTVWQAVIWGP 317
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
S L ++ L + PH++ D ++ I
Sbjct: 318 PHSPGIKLPPPPLHARH------------------PRGQSELLFNQALPHESNTDAMHAI 359
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITG---TDDLPPSGS---------PILTD--- 223
KGCY+GQE+ R +HR ++RKR + PP G+ I
Sbjct: 360 DFRKGCYVGQELTIRTEHRGVVRKRILPCVLYPDNGQQPPPGNLDLVAGYRPEIEDGVTA 419
Query: 224 -----------------DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG----- 261
G VG LA+ R++ + + G A + G
Sbjct: 420 EQIPREASIGRAPGGKKGRSAGKWLSGVGNVGLALCRLEIMTDVVLPGEASSGAGGFGDG 479
Query: 262 -----------------VRVKASFPHWYK 273
R+KA P W +
Sbjct: 480 DEFVVGVGAGEGEEGRKARIKAFVPEWLR 508
>gi|326386667|ref|ZP_08208289.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370]
gi|326208982|gb|EGD59777.1| aminomethyl transferase [Novosphingobium nitrogenifigens DSM 19370]
Length = 249
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 5 YLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
L +++ +++ G+ FLQ ++T DV + + +LTPQGK L FL+ +
Sbjct: 6 RLFDRALVRLSPLEPGEDVAAFLQGLVTNDVTG---PLPVWTGLLTPQGKALFDFLVWR- 61
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E D +L+ + D+L +L I + + V Q ++ D R
Sbjct: 62 EGDDLLLDCEAGSADALAKRLSL-YRLRRRIAIARDESLAVHWLPQGEDAPETASPDPRL 120
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
AD+ L + + + + R+ G+ + + + L G+S
Sbjct: 121 --ADLGLRWIAPASSRDEAADAAWQAHRLALGVPEGQAEIGSDATLWLETNATDLAGVSF 178
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
TKGCY+GQE +R+ R + +R +++ P
Sbjct: 179 TKGCYVGQENTARMNWRQKVNRRLVVVPLDQSRPE 213
>gi|319786898|ref|YP_004146373.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1]
gi|317465410|gb|ADV27142.1| folate-binding protein YgfZ [Pseudoxanthomonas suwonensis 11-1]
Length = 267
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 18/267 (6%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G A+ F A +DV L + S L P+G+++ F + + + L +
Sbjct: 1 MLALEGPDAVEFAHAQFASDVKALEIGSWQWSTWLNPKGRVIALFALLRTGAQSLRLVLP 60
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------RFSIAD 124
+ + D L + R V + + ++ + E R +I+
Sbjct: 61 DANATLVGDTLRKFVFRRKVTLTPLAELSIAGAFASLEAGNRVLVGTEDSDEGLRLAISP 120
Query: 125 VLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
R G + + + ++ + GI + P ++ L S++KG
Sbjct: 121 GRTLRLGGAPAVESTAALAAWNVADLRAGIPRLG-EAQVEQWTPQQLGLERLQAYSVSKG 179
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK---KALA 240
CY GQE+V+R +++ ++ D + P GS ++ D+ +GT+ V GK ALA
Sbjct: 180 CYPGQEIVARTHFLGKAKRQLALLQVADAVAP-GSEVVQDERAMGTVVAVAGKAPRWALA 238
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKAS 267
+ ++ + L V G V+
Sbjct: 239 VLPLELAE------SPLLVDGQPVRIE 259
>gi|28871370|ref|NP_793989.1| hypothetical protein PSPTO_4228 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971130|ref|ZP_03399249.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301381854|ref|ZP_07230272.1| hypothetical protein PsyrptM_04440 [Pseudomonas syringae pv. tomato
Max13]
gi|302059023|ref|ZP_07250564.1| hypothetical protein PsyrptK_03467 [Pseudomonas syringae pv. tomato
K40]
gi|28854621|gb|AAO57684.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213924119|gb|EEB57695.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 315
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 43/302 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F + E D
Sbjct: 10 CTLSHEGVLAVRGVDAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + + + L Y + S V +Q +G ++ +
Sbjct: 69 GCLLAMASELIEPQLLDLRKYAVFSKSKLTDESSAWVRFGLQEGDGALVGLGLDLPQDTG 128
Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + R AD L R + + ++R+ G V
Sbjct: 129 TVVRANELIAIRVSPARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFG 188
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPP 215
+T P + + G+S KGCY GQE+V+R+Q+ +++R +T +D++P
Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPA 245
Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264
G+ + + +G + + + LA+ + D ++ +G AL ++ +
Sbjct: 246 PGTALFSPVHGSAVGNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPY 305
Query: 265 KA 266
Sbjct: 306 TL 307
>gi|84623846|ref|YP_451218.1| hypothetical protein XOO_2189 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58426529|gb|AAW75566.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84367786|dbj|BAE68944.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 290
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 14/276 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 14 SLQDIQYVRLVGADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FS 121
++ + + +L + R + I + E + + + +
Sbjct: 74 LLMLLPDGNAAEIAAQLGRFVFRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLD 133
Query: 122 IADVLLHRTWG--HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ L RT E +A+ I+ + + G+ + P +D
Sbjct: 134 LGSAALPRTLLLYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALD 192
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V
Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSV 251
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
G ALA+ ++ A A HG R +A P
Sbjct: 252 AGNLALAVLPLELTLDADTPLQA-GAHGARPRAIAP 286
>gi|330898494|gb|EGH29913.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 315
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 113/302 (37%), Gaps = 43/302 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNENKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + ++ + L Y + S V +Q + ++S +
Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETD 128
Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
S + R + AD R + + ++R+ G V
Sbjct: 129 SVVRANDLIAIRVSPGRAELWVRSAQADSTKSRLAAQLSEGLLNDWLLGQIRVGIGQVFG 188
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215
+T P + + G+S KGCY GQE+V+R+Q+ +++R +T +++P
Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSNEEIPQ 245
Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264
G+ + + +G + + + LA+ + D + +G AL + +
Sbjct: 246 PGTALFSPVHASAVGNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPY 305
Query: 265 KA 266
Sbjct: 306 TL 307
>gi|312106517|ref|XP_003150732.1| aminomethyltransferase [Loa loa]
gi|307754103|gb|EFO13337.1| aminomethyltransferase [Loa loa]
Length = 246
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 12/242 (4%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90
V + A+ + +L +G+I+ ++ + + ++E DR+ + L +K+ +V
Sbjct: 5 VPQVADGRAQYALLLNSRGRIVEDLILYRQAGE-ILIESDRNNQSKLRKLFEMFKVHKDV 63
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
IE + + V + + + D R + +++ D Y E R N
Sbjct: 64 TIEEETESCVYHTDSITNDIPG--IQDPRVPSFGKRILSKILPDDQTV-DEHAYRERRFN 120
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
GI + ++ P D++NG+S KGCY+GQE+ +R + IRKR + T
Sbjct: 121 FGIPEGPSELAGE--LPLFMNADIMNGVSANKGCYLGQELTARALNAPEIRKRLLPFTCR 178
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ +GS + ++ G + GKK LA+ I + ++ P
Sbjct: 179 GMV--TGSLVNSEGRRAGKVIACTGKKGLALVPISRNTSPTH----FQSMNEDIEIFLPP 232
Query: 271 WY 272
W+
Sbjct: 233 WW 234
>gi|310766531|gb|ADP11481.1| putative global regulator [Erwinia sp. Ejp617]
Length = 328
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 98/278 (35%), Gaps = 37/278 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G I +LQ +T DV LP +A +GK+ +
Sbjct: 19 LTLISLEEWALVNASGADHISYLQGQVTLDVAALPANQHSPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
+ +E RS D+ + +L Y + + + + P
Sbjct: 79 ADGLAYIE-RRSLLDNQLSELKKYAVFAKISLTADDESVLLGVAGFQARAALANLFGTLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
G + + T ERF A + + G E +D + L I
Sbjct: 138 DAGSPVIQQGDSTLLWFDLPAERFLLVTTAEKAAEIAEKLAG--EARLNDSAQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + L IS KGCY GQE+V+R + R ++ + GT
Sbjct: 196 AGWPIIDA-ATTAQFIPQATNLQALEAISFKKGCYTGQEMVARAKFRGANKRALYWLAGT 254
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
P + L ++++G G LA ++D D
Sbjct: 255 AGGVPQANDAL--EMKMGENWRRTGTI-LAACQLDNGD 289
>gi|188534912|ref|YP_001908709.1| putative global regulator [Erwinia tasmaniensis Et1/99]
gi|188029954|emb|CAO97838.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 328
Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 101/278 (36%), Gaps = 37/278 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + G I +LQ +T DV +P R +A +GK+ +
Sbjct: 19 LTLISLEAWALVNASGADHISYLQGQVTLDVADMPASQHRPAAHCDAKGKMWSNLRLFHR 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
+ +E RS RD+ + +L Y + + + + P
Sbjct: 79 MDGLAYIE-RRSLRDNQLSELKKYAVFAKITLAADDESVLLGVAGFQARAALANLFSTLP 137
Query: 97 INGVVLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
G + + T ERF A + + G E +D + L I
Sbjct: 138 DAGSPVIQQDDSTLLWFDLPAERFLLVTPAEKAAEIAEKLAG--EAQLNDSTQWLALDIE 195
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P + L IS KGCY GQE+V+R + R ++ + GT
Sbjct: 196 AGFPVIDA-ATSAQFIPQATNLQALGAISFKKGCYTGQEMVARAKFRGANKRALYWLAGT 254
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
+ P + L ++++G G LA ++D D
Sbjct: 255 AGVVPVANDAL--EMKMGENWRRTGTI-LAACQLDNGD 289
>gi|85707996|ref|ZP_01039062.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1]
gi|85689530|gb|EAQ29533.1| predicted aminomethyltransferase [Erythrobacter sp. NAP1]
Length = 243
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 1 MSSVYLSNQSFIKVC----GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL 56
MS L++++ I++ G+ FLQ ++T DV ++ +A+L+ QGK + F
Sbjct: 1 MSGKLLNDRAIIRLAATEDGEDVRGFLQGLVTNDVSG---ELPVYAALLSAQGKAMFDFF 57
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
I + E+ +L+ + D L +L Y+LR + I V W++E + +
Sbjct: 58 IWEGEDGEILLDCEAEAADDLARRLSLYRLRRKIDIARDETQAVF--WSREK--FDGAKP 113
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D R S L +R + S Y R++ G+ + + + I + L+
Sbjct: 114 DPRLSD---LGYRAVAERSETESADAEYLAYRLSQGVPEGRAEI--ADILWLETNAVELH 168
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
G+S KGCY+GQE +R+ R + +R +++
Sbjct: 169 GVSFEKGCYVGQENTARMNWRQKVNRRLVVVPLDQS 204
>gi|237653170|ref|YP_002889484.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
gi|237624417|gb|ACR01107.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
Length = 345
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 94/286 (32%), Gaps = 40/286 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V L + I+ G + FL +++ DV + A ++ +P+G+++ FL+ EE
Sbjct: 40 AVPLLHLGTIRSQGPDSAAFLHNLVSNDVKHMEADTAAWNSFNSPKGRMIASFLVW-TEE 98
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + K Y LRS V + ++ + +
Sbjct: 99 GGHALALSADILPAFLKKFSMYVLRSKVKLADASAEVALIGLAGPQAVAIAQAAGAALPA 158
Query: 123 ADVL-----------------------------LHRTWGHNEKIASDIKTYHELRINHGI 153
D+ L + + + I G+
Sbjct: 159 EDMRQAVSAAGVRCIRLGAQRLVLAVATDAAPALFDALVAAGALRAGTAAWQLGMIRAGL 218
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DD 212
T +L+ G+ KGCY GQE+V+R Q+ ++KR +
Sbjct: 219 A-LVTAPTQEEFVAQMLNYELIGGVDFHKGCYPGQEIVARTQYLGKLKKRTYRLALPAGS 277
Query: 213 LPPSGSPILT---DDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
G+ + + G L V G +ALA+ + +
Sbjct: 278 TAAPGTDVYAPDFGEQSAGKLVNVAPTADGGVEALAVIQSSSAEAG 323
>gi|104783273|ref|YP_609771.1| hypothetical protein PSEEN4300 [Pseudomonas entomophila L48]
gi|95112260|emb|CAK16987.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 315
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 54/302 (17%), Positives = 106/302 (35%), Gaps = 39/302 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L A A +G++ F I E +
Sbjct: 10 CTLSHEGILAVRGSDAGKFLQGQLTCNLNYLSDDHASLGARCMVKGRMQSSFRILP-EGN 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
++L + + + L Y + S + + V Q + ++
Sbjct: 69 GYLLAMASELLEMQLADLKKYAVFSKATLADESAAWVRFGLQQGDNALQALGLEVPGETG 128
Query: 124 DVLLH-------------RTWGHNEKIAS------------DIKTYHELRINHGIVDPNT 158
+ H W ++ A+ + + ++ GI
Sbjct: 129 ATVRHEGLIAVTASTGRVELWAPADQAANVREKLAAQLPEGTLNDWLLGQVRAGIGQ-VM 187
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217
P + ++G+S KGCY GQE+V+R+Q+ +++R + + +P G
Sbjct: 188 GPTRELFIPQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDETAVPAPG 247
Query: 218 SPILTD--DIEIGTL--GVVVGKKA--LAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
+ I + +G + G G LA+ D V +G LT+ + +
Sbjct: 248 AEIFSPTHGSSVGEVVIGASSGNAVELLAVLSADAVADDNLHLGSLEGPRLTLLDLPYEL 307
Query: 267 SF 268
Sbjct: 308 DR 309
>gi|218710580|ref|YP_002418201.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32]
gi|254814153|sp|B7VK90|YGFZ_VIBSL RecName: Full=tRNA-modifying protein ygfZ
gi|218323599|emb|CAV19849.1| hypothetical protein VS_2630 [Vibrio splendidus LGP32]
Length = 323
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 31/250 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109
+ L +S + + ++ Y + S V IE Q I+ + S +
Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKVDIEQTSDVVIGVMGASADQYIDSISESQGKVRV 142
Query: 110 FSNSSFI---DERFSIADVLLHRTW----GHNEKIASDIKTYHELRINHGIVDPNTDF-- 160
S + + D R+++ EK++ + YHE I+D +
Sbjct: 143 ISGGTAVQVSDNRWALLVTQEATEALVSSSTAEKVSEALWQYHE------ILDAQPNLSK 196
Query: 161 -LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+ P + + GIS +KGCY GQE V+R ++R + ++ I++GT S
Sbjct: 197 AEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTSSDVLSLEN 256
Query: 220 ILTDDIEIGT 229
+ + +G
Sbjct: 257 TIELERSVGE 266
>gi|312959548|ref|ZP_07774065.1| glycine cleavage T protein [Pseudomonas fluorescens WH6]
gi|311286265|gb|EFQ64829.1| glycine cleavage T protein [Pseudomonas fluorescens WH6]
Length = 313
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 54/298 (18%), Positives = 103/298 (34%), Gaps = 35/298 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L A A T +G++ F I ++ D
Sbjct: 8 CPLSHEGVLAVRGADAAKFLQGQLTCNLNYLSDTQASLGARCTQKGRMQSSFRIV-LQGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ----------------E 107
+L + + + L Y + S + + V +
Sbjct: 67 GVLLAMASELLEPQLADLKKYAVFSKSKLTDESAAWVRFGVANGDHLLTGLGLGLPAETD 126
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
I R S L + + + + + +I GI
Sbjct: 127 SVARAEHLIAIRVSPGRAELWVPAESADTVRSQLAAHLDEAPLNDWLLGQIRAGIGQVMP 186
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + +P G
Sbjct: 187 Q-TRELFIPQMLNLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLKLDAAQMPEPG 245
Query: 218 SPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+P+ + + IG + + + LA+ + + D L G+ + P
Sbjct: 246 TPLFSPSHNSAIGEVVIAAKTDLSIELLAVLQAEAADSGDVHLGTLEGPGLHL-LELP 302
>gi|86146368|ref|ZP_01064692.1| hypothetical protein MED222_22346 [Vibrio sp. MED222]
gi|85835847|gb|EAQ53981.1| hypothetical protein MED222_22346 [Vibrio sp. MED222]
Length = 323
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMIGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109
+ L +S + + ++ Y + S V IE Q I+ + S +
Sbjct: 83 GYALMQPKSAIEIELVEIKKYAVFSKVDIEQTSDVVIGVMGASADQYIDSISESQGKVRV 142
Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
S + + D R+++ A+ L+ + EK++ + YHE I+D +
Sbjct: 143 ISGGTAVQVSDNRWALLVTQEAAEALV--SSSTAEKVSEALWQYHE------ILDAQPNL 194
Query: 161 ---LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ P + + GIS +KGCY GQE V+R ++R + ++ I++GT S
Sbjct: 195 SKAEQNEHIPQALNLQAIGGISFSKGCYTGQETVARAKYRGMNKREMRIVSGTSSDILSL 254
Query: 218 SPILTDDIEIGT 229
+ + +G
Sbjct: 255 ENTIELERSVGE 266
>gi|261253910|ref|ZP_05946483.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891]
gi|260937301|gb|EEX93290.1| glycine cleavage T-protein [Vibrio orientalis CIP 102891]
Length = 322
Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 91/269 (33%), Gaps = 29/269 (10%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L+ I + G +LQ +T DV+TL + A +GK+ F +
Sbjct: 21 LAIAPLTAWGAITLMGDDKKSYLQGQVTCDVVTLDEHSSTFGAHCDAKGKVWSVFRLFHH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------- 113
+ + S + + +L Y + S V + + +S
Sbjct: 81 NG-GYAMFQPASLIEKELAELKKYAIFSKVEFAHSDEIALGVMGCNASILVDSLSEESGN 139
Query: 114 ----------SFIDERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
D+R+ + + + + + I G N +
Sbjct: 140 VRRIDGGSAVKIDDQRWLLLVTEASAQQIVAQSNASTVAEDLWTLHDIQSGTPLLNAE-Q 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-----DDLPPS 216
+ P + ++GIS KGCY GQE V+R ++R + ++ I+ G+ DD
Sbjct: 199 QNEHIPQAINVQAVDGISFKKGCYTGQETVARAKYRGMNKRALFIVQGSADKAIDDNAEL 258
Query: 217 GSPILTDDIEIGTLGVV---VGKKALAIA 242
+ + G L ALA+
Sbjct: 259 ERAVGENWRSAGKLLASYRFTDNTALALV 287
>gi|331230924|ref|XP_003328126.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307116|gb|EFP83707.1| hypothetical protein PGTG_09420 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 403
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 34/250 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI------ARGSAILTPQGKILLYFLI 57
L ++ I + G+ + FLQ +IT ++ L + A +A LTP G++ +
Sbjct: 35 TRLVDRGLISLKGEKSKTFLQGLITNNLNRLSSQEEAHHNTAFYTAFLTPPGRLQFDGFV 94
Query: 58 SKIEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQE 107
+ +++ + D L+ L + L S V I + + W N +
Sbjct: 95 YPEPPENEAQCLLIDHHLPEADRLLAWLRRFVLNSRVKIS-KDSRELWAVWPNHPLDNIQ 153
Query: 108 HTFSNSSFIDERFSIA-------DVLLHRTWGHNEKIA----------SDIKTYHELRIN 150
NSS +++ + A L +R G+ E + + + Y +
Sbjct: 154 SLLPNSSLLEQPSNHAWKDHRGDQRLGYRIIGNPESVPELEPLAQLPEAPLSAYALHVLL 213
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
H + P+ P +A +D +G+ KGCY+GQE+ +R H +IRKR + ++
Sbjct: 214 HASLPPSLSPPYPVTLPFEANLDYHHGVDFRKGCYVGQELTARTYHTGVIRKRMVPVSIE 273
Query: 211 DDLPPSGSPI 220
D P+ + +
Sbjct: 274 KDGLPALASV 283
>gi|66047189|ref|YP_237030.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae B728a]
gi|63257896|gb|AAY38992.1| Glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae B728a]
Length = 315
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 57/302 (18%), Positives = 114/302 (37%), Gaps = 43/302 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLSHEGVLAVRGVDASKFLQGQLTCNLNYLNEDTSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + ++ + L Y + S V +Q + ++S +
Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQQTD 128
Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
S + R + D + R H + + ++R+ G V
Sbjct: 129 SVVRANDLMAIRVSPGRAELWVRSAEVDSIKSRLASHLNEAPLNDWLLGQIRVGIGQVFG 188
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPP 215
+T P + + G+S KGCY GQE+V+R+Q+ +++R +T + ++P
Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQ 245
Query: 216 SGSPILTD--DIEIGTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRV 264
G+ + + +G + + + LA+ + D + +G AL + +
Sbjct: 246 PGTALFSPVHASAVGNVVIAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPY 305
Query: 265 KA 266
Sbjct: 306 TL 307
>gi|260775217|ref|ZP_05884115.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260608918|gb|EEX35080.1| glycine cleavage T-protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 322
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 88/246 (35%), Gaps = 25/246 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L++ I G +LQ +T DV+ L A A +GK+ F +
Sbjct: 23 LTHLTSWGMITAQGDDKKSYLQGQVTCDVVQLAEDSATFGAHCDAKGKVWSVFRLFHHRG 82
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DER 119
+L+ S ++ + +L Y + S + + L ++ + D R
Sbjct: 83 GYAMLQ-PSSAIETELAELKKYAIFSKIEFAQSTDVLLGLIGDKANHVVEELSQQRGDVR 141
Query: 120 FSIAD---------VLLHRTWGHNEKIASDIKT-------YHELRINHGIVDPNTDFLPS 163
LL E++ I + L I I + S
Sbjct: 142 TIEGGTAIKIDQQRWLLAIDATTAEQLCQSINATKACEDIWTRLDIEAAIPAVTQE-QQS 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILT 222
P + L GIS +KGCY GQE V+R ++R + ++ I+ G +G+ I
Sbjct: 201 EHIPQALNVQALGGISFSKGCYTGQETVARAKYRGMNKRALQIVKGHSASEIKAGAEI-- 258
Query: 223 DDIEIG 228
+ +G
Sbjct: 259 -ERSVG 263
>gi|227356369|ref|ZP_03840757.1| GCV family glycine cleavage complex aminomethyltransferase [Proteus
mirabilis ATCC 29906]
gi|227163479|gb|EEI48400.1| GCV family glycine cleavage complex aminomethyltransferase [Proteus
mirabilis ATCC 29906]
Length = 328
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 94/267 (35%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + S I G + +LQ +T D+ LP +A +GK+ I
Sbjct: 19 LTLISLDDWSLITATGADSEKYLQGQLTTDIAALPTTEHTLAAHCEAKGKMWSTLRIFHQ 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ + + ++ + + +L Y + S V ++ Q + + F
Sbjct: 79 QAGFAYI-LRKNVAEKQLTELKKYAVFSKVTFTENTDAVLLGLAGQGAAQALAEFFPEIP 137
Query: 116 -------------------IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
ERF I + + SD + L I G
Sbjct: 138 RKANEVVNHQNSYLLQLPLPTERFLIVTDEETAKKLATTLPAETSDSDQWLALDIEAGYP 197
Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDD 212
+T + P + L I KGCY GQE+VSR + R ++ +++ G
Sbjct: 198 IIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGAAQ 256
Query: 213 LPPSGSPI---LTDDI--EIGTLGVVV 234
LP G + L +D + GT+ V
Sbjct: 257 LPDIGGSVEWQLGEDKWRKTGTVLSAV 283
>gi|148981090|ref|ZP_01816283.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3]
gi|145960993|gb|EDK26317.1| hypothetical protein VSWAT3_20915 [Vibrionales bacterium SWAT-3]
Length = 323
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 37/253 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
++S+ S I + G +LQ +T DV+TLP + A +GK+ F +
Sbjct: 24 THVSDWSAITMVGDDKKSYLQGQVTCDVVTLPNDESTLGAHCDAKGKVWSIFRLFHHNG- 82
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE--------------IQPINGVVLSWNQEHT 109
+ L +S + + ++ Y + S V IE Q I+ + S +
Sbjct: 83 GYALMQPKSAIEVELVEIKKYAVFSKVDIEQTSDVIIGVMGAAADQYIDSISESQGKVRA 142
Query: 110 FSNSSFI---DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN--- 157
S + + + R+++ A+ L+ T EK++ + YHE I+D
Sbjct: 143 ISGGTAVQVAENRWALLVTEQAAEALV--TSSSAEKVSEALWQYHE------IIDAQPHL 194
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPS 216
T + P + + GIS TKGCY GQE V+R ++R + ++ I++G T ++
Sbjct: 195 TKAEQNEHIPQALNLQAIGGISFTKGCYTGQETVARAKYRGMNKREMRIVSGSTAEVLTL 254
Query: 217 GSPILTDDIEIGT 229
SPI + +G
Sbjct: 255 ESPIEL-ERSVGE 266
>gi|261211566|ref|ZP_05925854.1| glycine cleavage T-protein [Vibrio sp. RC341]
gi|260839521|gb|EEX66147.1| glycine cleavage T-protein [Vibrio sp. RC341]
Length = 323
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 21/246 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+L+ I + G +LQ +T +V++L + A +GK+ F +
Sbjct: 23 LTHLTEWGAITMVGADKKAYLQGQVTCNVVSLQEQQVIFGAHCDAKGKVWSVFRLFHHH- 81
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPIN-GVVLSWNQEHTFSNSSFIDERF 120
D + + RS ++ + +L Y + S V I E I GV+ S S + +
Sbjct: 82 DGYAMFQPRSAIEAELRELKKYAIFSKVTIAESCDIAFGVMGSQANAWIDSLTEQTGDVR 141
Query: 121 SIADVLLHRTWGHNEKIASDIKT-----------------YHELRINHGIVDPNTDFLPS 163
I R + D + + + I + T +
Sbjct: 142 RIEGGTAVRISELRWLLLVDAQQAEQYVNAWQGLCVEQALWTRMDIEEAVP-VVTQRAQN 200
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + ++GIS +KGCY GQE V+R ++R I ++ I+ G S +T
Sbjct: 201 EHIPQALNVQAVDGISFSKGCYTGQETVARAKYRGINKRAMYIVKGNLTKALSHDAPVTL 260
Query: 224 DIEIGT 229
+ +G
Sbjct: 261 ERAVGE 266
>gi|288550368|ref|ZP_05970159.2| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316]
gi|288315642|gb|EFC54580.1| folate-binding protein YgfZ [Enterobacter cancerogenus ATCC 35316]
Length = 298
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 99/263 (37%), Gaps = 35/263 (13%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G + +LQ +TADV L +A P+GK+ + + ++ +E RS
Sbjct: 3 TLTGADSEKYLQGQVTADVAQLTEHQHLLAAHCDPKGKMWSNLRLFRRQDGFAFIE-RRS 61
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSN--SSFIDE---------- 118
RD+ + +L Y + S V I + + V + N ++ D
Sbjct: 62 LRDAQLAELKKYAVFSKVTIAPDDEHVLLGVAGFQARAALKNLFAALPDADKPLVSEGVT 121
Query: 119 -----RFSIADVLLHRTWGHNEKIASDI---------KTYHELRINHGIVDPNTDFLPST 164
LL E++ + + + L I G+ + +
Sbjct: 122 SLLWFEHPAERFLLVTDEATAERVTEALRGEAQFNNSQQWLALNIEAGLPVIDA-ANSAQ 180
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTD 223
P + L GIS KGCY GQE+V+R + R ++ + G +P +G I
Sbjct: 181 FIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGHAGRVPQAGEDI--- 237
Query: 224 DIEIGTLGVVVGKKALAIARIDK 246
+++IG G LA ++D
Sbjct: 238 ELKIGDNWRRTGTV-LAAVQLDD 259
>gi|289676642|ref|ZP_06497532.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae FF5]
Length = 281
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 101/263 (38%), Gaps = 34/263 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+++ + V G A FLQ +T ++ L + A T +G++ F I E D
Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGD 68
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNS 113
+L + ++ + L Y + S V +Q + ++S +
Sbjct: 69 GCLLAMAGELIEAQLLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETD 128
Query: 114 SFIDE-----------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
S + R + AD + R + + ++R+ G V
Sbjct: 129 SVVRANDLIAIRVSPGRAELWVRSAQADSIKSRLAAQLSEGPLNDWLLGQIRVGIGQVFG 188
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPP 215
+T P + + G+S KGCY GQE+V+R+Q+ +++R +T +++P
Sbjct: 189 ST---REEFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSDEEIPQ 245
Query: 216 SGSPILTD--DIEIGTLGVVVGK 236
G+ + + +G + +
Sbjct: 246 PGTALFSPVHASAVGNVVMAAQD 268
>gi|145589151|ref|YP_001155748.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047557|gb|ABP34184.1| glycine cleavage T protein (aminomethyl transferase)
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 336
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 40/270 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA-----------DVLTLPYKIARGSAILTPQGKI 51
L I V G A FLQ+ ++ D+ R +P+G++
Sbjct: 19 GCLLPQWGMIFVEGPDATSFLQSQLSNSLLGMKRTHDPDIAK-SSDSVRLVGYCSPKGRL 77
Query: 52 LLYFLI-----SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106
+ I S+ +D ++L I + + +L Y LRS V + V +
Sbjct: 78 ISSAWIGLFPTSESSDDRYVLFISKDIAATTAKRLAMYVLRSKVKVIDMSSEWNVSGFFD 137
Query: 107 EHT--------FSNSSFIDERFSIADVLLHRTWGHNEKIASD---------IKTYHELRI 149
S + E ++ L T K+ ++ I +++L +
Sbjct: 138 AAIHDGCEHLKTSQDCLVAEIPNVLVQGLTYTRYLIAKLGNEKTEPPFEGGIDAWNDLEV 197
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
I P + + G+ KGCY GQE+V+R Q+R I++R +
Sbjct: 198 LSAIPRIVL-ATQEQFVPQMINFESVAGVDFKKGCYPGQEIVARSQYRGAIKRRLFLANI 256
Query: 210 T-----DDLPPSGSPILTDDIEIGTLGVVV 234
T D L G+ + D G+VV
Sbjct: 257 TNASIKDALTSPGTELFHSDDSNQPAGMVV 286
>gi|197285868|ref|YP_002151740.1| global regulator [Proteus mirabilis HI4320]
gi|194683355|emb|CAR44062.1| putative aminomethyltransferase [Proteus mirabilis HI4320]
Length = 328
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 95/267 (35%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + S I G + +LQ +TAD+ LP +A +GK+ I
Sbjct: 19 LTLISLDDWSLITATGADSEKYLQGQLTADIAALPTTEHTLAAHCEAKGKMWSTLRIFHQ 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ + + ++ + + +L Y + S V ++ Q + + F
Sbjct: 79 QAGFAYI-LRKNVAEKQLTELKKYAVFSKVTFTENTDAVLLGLAGQGAAQALAEFFPEIP 137
Query: 116 -------------------IDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
ERF I + + SD + L I G
Sbjct: 138 RKANEVVNHQNSYLLQLPLPTERFLIVTDEETAKKLATTLPAETSDSDQWLALDIEAGYP 197
Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDD 212
+T + P + L I KGCY GQE+VSR + R ++ +++ G
Sbjct: 198 IIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGAAQ 256
Query: 213 LPPSGSPI---LTDDI--EIGTLGVVV 234
LP G + L +D + GT+ V
Sbjct: 257 LPDIGGSVEWQLGEDKWRKTGTVLSAV 283
>gi|255318647|ref|ZP_05359878.1| glycine cleavage T protein [Acinetobacter radioresistens SK82]
gi|262379127|ref|ZP_06072283.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255304329|gb|EET83515.1| glycine cleavage T protein [Acinetobacter radioresistens SK82]
gi|262298584|gb|EEY86497.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 239
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 27/231 (11%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A FLQ +TADV L R +AI +G+I +S+ + + F + + +
Sbjct: 10 SLKGVDAQKFLQGQVTADVERLDSNY-RYTAICDLKGRIHFGLWLSRQDAENFSIVVTQD 68
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
+ + + Y S + E I V S + T RFS D
Sbjct: 69 QSEEFAKHIRKYGAFSKMTFE--DIGAVFPSMDNALT---------RFSSED-------- 109
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+D+ + I G T P + + G+ KGCY+GQE+V+
Sbjct: 110 ------TDLNAWQLQAIEQGQA-WITSLTEHEFQPQELRLHQRGGVHYDKGCYLGQEIVA 162
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
R+ + + ++ G+ P + + D + ++ V G KAL +A+
Sbjct: 163 RLWFKAKPKHWLHLVQGSGTAPAPATLLHDDVEVVNSIAVENGYKALVVAK 213
>gi|254448752|ref|ZP_05062209.1| glycine cleavage T protein [gamma proteobacterium HTCC5015]
gi|198261593|gb|EDY85881.1| glycine cleavage T protein [gamma proteobacterium HTCC5015]
Length = 333
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 116/300 (38%), Gaps = 46/300 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ +KV G A FL +++DV L ++ S+ +P+G + + + K+ D +L +
Sbjct: 35 AILKVSGSDATEFLHGQLSSDVKNLQVGSSQLSSYSSPKGMVYSHCRLYKLSNDECLLRL 94
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------SNSSFIDER 119
RS S+ +L + LR+ V I + GV+L E + + F
Sbjct: 95 PRSLTVSVGKRLKMFVLRAQVEITVDESVGVLLLAGSEASALTPLCDDLPDTPDHFSQSE 154
Query: 120 FSIADVL--LHRTWGHNE---------------------KIASDIKTYHELRINHGIVDP 156
SIA L + R G +A D T LRI G
Sbjct: 155 HSIALKLPDIQRENGSLPYYEVVLSNEHLSTAWKTLTQTHLACDPSTADLLRILSGEPHL 214
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ + + L GIS KGCY GQE +++ Q+R +R + +TG +L
Sbjct: 215 SPS-TTEQFVAQNLNLHLNGGISFKKGCYPGQEYIAKTQYRGRLRSQLFRLTGETEL-EP 272
Query: 217 GSPILTD---DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
G+ + ++ + EIGT+ + A+ R+ A + G T P
Sbjct: 273 GAALYSNPDSNTEIGTVLKSAWDGQSYQTTAVLRL----KATESGTVYTGDNSECAVHTP 328
>gi|262166511|ref|ZP_06034248.1| glycine cleavage T-protein [Vibrio mimicus VM223]
gi|262026227|gb|EEY44895.1| glycine cleavage T-protein [Vibrio mimicus VM223]
Length = 290
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 30/275 (10%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G +LQ +T +V++L + A +GK+ F + D + + +S +
Sbjct: 3 GADKKSYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHN-DGYAMFQPQSAIE 61
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------SFIDERFSIA 123
+ +L Y + S V I + + +Q + + +S R S
Sbjct: 62 VELRELKKYAIFSKVTIAESSDIALGVMGSQANAWIDSLTEQTGDVRRIEGGTAVRISEL 121
Query: 124 DVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
LL T E+ + + + + I + T + P + +N
Sbjct: 122 RWLLLVTAEQAEQYVNAWQGLCVEQALWTRMDIEEAVP-VVTQNAQNEHIPQALNVQAVN 180
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
GIS TKGCY GQE V+R ++R I ++ I+ G + P S + + +G G+
Sbjct: 181 GISFTKGCYTGQETVARAKYRGINKRAMYIVKGNINTPLSHEESVILERAVGENWRSAGQ 240
Query: 237 --------KALAIARIDKVDHAIKKGMALTVHGVR 263
+AI I + + +++G+ L +
Sbjct: 241 LLTHYQFEDGIAIGLI-VLPNDLEEGVELRLASQP 274
>gi|303257418|ref|ZP_07343431.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Burkholderiales bacterium 1_1_47]
gi|331000631|ref|ZP_08324286.1| glycine cleavage T-protein barrel domain protein [Parasutterella
excrementihominis YIT 11859]
gi|302859775|gb|EFL82853.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Burkholderiales bacterium 1_1_47]
gi|329570903|gb|EGG52611.1| glycine cleavage T-protein barrel domain protein [Parasutterella
excrementihominis YIT 11859]
Length = 304
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 44/300 (14%)
Query: 1 MSSVYLSNQSF--------IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL 52
MS + L++ +F + V G+ A FLQ ++T +V T+ AR +A QG+
Sbjct: 1 MSMLELNSWTFSEEQDFVFVVVRGEDAENFLQGMLTQNVKTMGPTDARWTAACNHQGRTA 60
Query: 53 LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
LI +I + F + + +S +D+L + LRS V IEI P +
Sbjct: 61 ATSLIVRIP-NGFGMLMPKSIAQDEVDRLSKFILRSKVEIEILPEPITYFCSDDAKAIDR 119
Query: 113 SSFIDERFS----IADVLLHRTWGHNEKIA----------------SDIKTYHELRINHG 152
R + D ++ N+ + IK ++ R+
Sbjct: 120 PCPALPREPMQAYVGDSVIVVRLPSNDAQGMHGKFVAIGKIPDDMYAPIKAHN--RLARS 177
Query: 153 IVDPNTDFLPS----TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM--I 206
+++ + P MDL+ GI+ KGCY GQE++S+ ++ +++R +
Sbjct: 178 LMEEGIALIEKPEVLEWLPQALNMDLIGGIAFNKGCYTGQEIISKTENLGKVKRRMFLGV 237
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G DL G+ + ++ +G + G+ L + + +D L V V V+
Sbjct: 238 ARGVKDL-DEGTEVFMENEPMGRVIQSDGEHFLFVLTYEYMD------SELYVKDVPVEI 290
>gi|319941082|ref|ZP_08015418.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
gi|319805439|gb|EFW02241.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
Length = 322
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/298 (19%), Positives = 110/298 (36%), Gaps = 36/298 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S N + I+V G+ A FL T + L + +P+G++L +
Sbjct: 13 SIACAPNTALIRVTGEDARHFLHGQFTQKIENL-AGRTTLAGYCSPKGRLLAVMRAW-LS 70
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSF----- 115
D +L + + + +L Y LRS V E + P ++++ +E + ++
Sbjct: 71 GDAVMLALPAEMAEGFLKRLHMYVLRSKVSFEVVDPAPAMLIAVGEEGAKTLAALGLEMP 130
Query: 116 ---------------IDERFSIAD----------VLLHRTWGHNEKIASDIKTY-HELRI 149
I+ ++ +L + + + I
Sbjct: 131 AHGVCIEKDGFTLLGIEPSQTVPGFCAGGARALVILPAGKTAADFGLTPAPAAWALASSI 190
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-IT 208
+ GI T P ++L++G+S +KGCY GQEVVSR+QH +R + I
Sbjct: 191 SAGIPQ-VLPPTRETFVPQAVNLELVDGVSFSKGCYPGQEVVSRLQHLGETNRRAAVGIL 249
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ P+G+P+ E G + V + ++ G+ LT G +
Sbjct: 250 SAEAAAPAGAPVYAKGEEAGKVVRAVTLGGRTLVLFSATIGSLFAGITLTPDGQPLDL 307
>gi|307545134|ref|YP_003897613.1| aminomethyltransferase [Halomonas elongata DSM 2581]
gi|307217158|emb|CBV42428.1| K06980 [Halomonas elongata DSM 2581]
Length = 360
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 100/287 (34%), Gaps = 32/287 (11%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + + V G A FLQ +A + + + A TP+G++L + ++ +
Sbjct: 52 PLVHLGILDVVGDGAERFLQGQTSAQLSLVDGEFAPLGCFCTPKGRVLANVQLWRVAPNH 111
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------- 117
+ L SL + L + V + + ++ + E + +D
Sbjct: 112 YRLLTHHELVASLAEHLAKFAPFYRVELTPRDDLALIGLFGHEAPAVAEALLDVEPPGAW 171
Query: 118 ---ER------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
ER AD + + D T+ I G+V
Sbjct: 172 RQVEREALQVVGHPGPVTRMLLCLPTADAEATWSRLAAQVTPVDSATWRLHDIQAGLV-W 230
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPP 215
+ P + L GIS KGCY GQEVV+R R ++KR M + LP
Sbjct: 231 LDASQRDSYLPQMINWEALGGISFKKGCYTGQEVVARAHFRGQVKKRLMRAQLEGEQLPE 290
Query: 216 SGSPIL-TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
GS +L D +G + A A I V + L+V G
Sbjct: 291 PGSAVLDAADKRLGEVLS-AELDAYGQAEILAVMSTREPKEPLSVAG 336
>gi|238921204|ref|YP_002934719.1| hypothetical protein NT01EI_3346 [Edwardsiella ictaluri 93-146]
gi|259710250|sp|C5BAS5|YGFZ_EDWI9 RecName: Full=tRNA-modifying protein ygfZ
gi|238870773|gb|ACR70484.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 331
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 90/250 (36%), Gaps = 35/250 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I V G A +LQ +TAD+ +L QGK+ + +
Sbjct: 20 LTLMRLDDWLPINVSGPDAQSYLQGQLTADLPSLAATQHTLCGHCDAQGKLWSSLRLLRR 79
Query: 61 EED-TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ T++L RS + +L Y + + I + V+L + R
Sbjct: 80 RDGFTYLLR--RSVATLQMLELKKYAVFAKASI-VSDEGAVLLGVAGAQASEALGALFPR 136
Query: 120 FSIADV---------LLHRTWGHNEKIA---------------------SDIKTYHELRI 149
AD LL+ W + +D + L I
Sbjct: 137 LPDADAPLLQAGRSHLLYMAWPQPRYLLICDDADEAERIFAPLSARARLADSAQWLALDI 196
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GI + + P + L GIS TKGCY GQE+V+R ++R R+ + G
Sbjct: 197 ESGIP-LIDEPNCDSFLPQAVNLQALGGISFTKGCYSGQEMVARAKYRGANRRALFWLRG 255
Query: 210 TDDLPPSGSP 219
+ + P S
Sbjct: 256 SAERLPHASE 265
>gi|254430061|ref|ZP_05043768.1| folate-binding protein YgfZ [Alcanivorax sp. DG881]
gi|196196230|gb|EDX91189.1| folate-binding protein YgfZ [Alcanivorax sp. DG881]
Length = 315
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 32/293 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + +D ++
Sbjct: 28 DHLAVIRAYGEEAGHYLQGQLSCDLHEVDNGGHLTGMHLSLKGRGLVSVRIVQDGDD-YL 86
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFS--NSSFIDE 118
+ + +++I L+ Y+LR+ V ++ ++G + + + E S N +
Sbjct: 87 MLCPAGQSEAVIKSLMKYRLRAKVEFQVDEQAVLMGLSGALPATSPEPGQSGRNGQGLWL 146
Query: 119 RFSIADVLL----------HRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIF 166
R+ D L T ++ A++ + + I+ G +V P +
Sbjct: 147 RYPNTDHALLITDTEQAESVWTVLALDRAATNANGWRQADIDAGEGMVYPGAE---DLFL 203
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPILTDD 224
P D+ G++ KGCY GQEVV+R+ + +++R I DL P + +D
Sbjct: 204 PQVLNYDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRIDYAAEVDLAPGETLRNSDG 263
Query: 225 IEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
G + G AL + R D K L + + P +K
Sbjct: 264 KAAGEVVSSARNHAGHSALVVLRRDTDGVLFKDEQPLDSQLGTLPYALP--WK 314
>gi|270356904|gb|ACZ80689.1| putative mitochondrial transferase CAF17 protein [Filobasidiella
depauperata]
Length = 374
Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/316 (18%), Positives = 106/316 (33%), Gaps = 74/316 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L + +++ G + FL+ + DV L S L G++L I +
Sbjct: 9 AHLKQKLVLQISGPDSQKFLKGLSCKDVEYLSGG---YSGFLNASGRVLHTVFIFPRSDT 65
Query: 64 TFIL--EIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWN--------------- 105
++++ E S + L L +KLRS V I ++ SW
Sbjct: 66 SYLITHESQESHPEPLTKLLPPFKLRSKVRIKDVTDQWDAWSSWGSSLAQIDSPRRLWKI 125
Query: 106 QEHTFSNSSF------------------IDER--FSIADVLLHRTWGHNEKIASD----- 140
+ S + D R ++ L G+ +A++
Sbjct: 126 GSGGAAESHWEWQQGVAQLNLAEGEVGCWDLRAGWNGMGQQLLVPKGNRPSLATNYDIST 185
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
Y R+ G+ + + +P P ++ MD+ G+ KGCY+GQE+ R H
Sbjct: 186 ADEYKLHRMLLGVPEGPEEIVPGQALPLESCMDIHGGVDFRKGCYLGQELTVRTYHTGAT 245
Query: 201 RKRPMIIT---------------GTDDLPPSGSPILTD-------------DIEIGTLGV 232
RKR + I P S IL++ IG +
Sbjct: 246 RKRILPIHLIPLDSSLKIFDVLNSPVQTPIEDSNILSEIIYHPPRSSAIRKTRSIGKVLA 305
Query: 233 VVGKKALAIARIDKVD 248
+ L + R++ +
Sbjct: 306 LHNTVGLGLVRLEMAE 321
>gi|260548872|ref|ZP_05823094.1| glycine cleavage T protein [Acinetobacter sp. RUH2624]
gi|260408040|gb|EEX01511.1| glycine cleavage T protein [Acinetobacter sp. RUH2624]
Length = 240
Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 29/249 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + KI
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + Y S + + Q + V +HT +S+
Sbjct: 58 NAESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGV--VFPKVVNDHTEFSST------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + + I G P + + G++
Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPSPATQLHNDVEVVNSTQTTDGYIALV 211
Query: 241 IARIDKVDH 249
+A+ +
Sbjct: 212 VAKPAALAE 220
>gi|325123348|gb|ADY82871.1| hypothetical protein BDGL_002285 [Acinetobacter calcoaceticus
PHEA-2]
Length = 240
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 31/244 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + KI
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENTTRYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDER 119
++F + + + + + + Y S + + Q I V++ E T +
Sbjct: 58 NAESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGIVFPKVVNHQTEFTTAE------- 110
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+DI + + I G T P + + G++
Sbjct: 111 -------------------TDISEWQKQAIMTGQA-WITQTTEHEFQPQELRLHQREGVN 150
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ G AL
Sbjct: 151 YDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDVEVVNSIANDEGYLAL 210
Query: 240 AIAR 243
+A+
Sbjct: 211 VVAK 214
>gi|262369241|ref|ZP_06062569.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315309|gb|EEY96348.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 240
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 31/250 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + I G A+ FLQ +T +V L + +AI +G+I ++K
Sbjct: 1 MSDLAFSSFTLI---GVDALKFLQGQVTVNVEALAENTTQYTAICDLKGRIHFGLWLTKR 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ F + + + + + + S + +E P+ V ++ Q+ T ++
Sbjct: 58 NPEHFEIVTTQDQSEEFAKHIKKFGAFSKMKLE--PVGSVFPTFTQDRTTFSAE------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGIS 179
+DI + I HG + D +F P + + G+
Sbjct: 110 -----------------PTDIAAWQVQAITHG--EAFIDQSIEHMFQPQELRLHQRGGVH 150
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQEV++R+ + + +I GT P + + + + G AL
Sbjct: 151 YDKGCYLGQEVIARLWFKAKPKAWLHLIQGTGSAPAQAEQLNKGIQVVNSAAIDGGYIAL 210
Query: 240 AIARIDKVDH 249
+AR + +
Sbjct: 211 VVARPESLTE 220
>gi|290996284|ref|XP_002680712.1| predicted protein [Naegleria gruberi]
gi|284094334|gb|EFC47968.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/341 (21%), Positives = 131/341 (38%), Gaps = 77/341 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT-----------LPYKIARGSAILTPQGKILLYF 55
S +S + V G+ + F+ +++T+DV LP ++ S L+P+G++L
Sbjct: 106 SKRSVVTVEGEHSDSFIHSLVTSDVSKKLIVRDETKKNLPTHSSQPSLFLSPKGRVLFDA 165
Query: 56 LIS-KIEEDT-------FILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------- 93
++S + E D +E + S+ + L + L + LR V IE
Sbjct: 166 ILSVEFESDGSLKNNRKIYIEHEASQTEHLYNYLKSHVLRKKVKIEKFSNNFQSTTTTTS 225
Query: 94 IQPINGVVLSWNQEHTFSNS------------SFIDERFSIADVLLHRTWGHNEKIA--- 138
PI V + + S D R ++ + + E+
Sbjct: 226 EGPIVKVFALFGNKILKSRKPDLQYKWKDSVVCVKDPRIPTLGYRIYGFFSNQEQYEQFK 285
Query: 139 ---------------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ Y +R+ GI + + D + FP ++ + + GI KG
Sbjct: 286 HDVSAELSKKLLVDTESAEYYERIRLLSGIAENSVDIPSDSAFPMESGFEQIGGIHFGKG 345
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD--------IEIGTLGVVVG 235
CY+GQE+ +R HR IRKR +II G D LP +GS + + G +
Sbjct: 346 CYVGQELTNRTFHRGEIRKRIVIIKG-DKLPEAGSDLQFTGSNTEELRSDKAGRMCSRDE 404
Query: 236 KKALAIARIDKV---DHAIKKGMALTVHGV--RVKASFPHW 271
+ LA + + + D ++ + G +K P+W
Sbjct: 405 QVGLATVKFEPLLEKDSTLELSFTNSQDGSTNTLKIVPPYW 445
>gi|149910165|ref|ZP_01898811.1| aminomethyltransferase-like protein [Moritella sp. PE36]
gi|149806751|gb|EDM66715.1| aminomethyltransferase-like protein [Moritella sp. PE36]
Length = 328
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 36/248 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + G+ + +LQ +T D++ L + P+GK+ F ++K D+F
Sbjct: 23 LSHWGLMTATGEQRLSYLQGQLTCDLVGLEDQQTTWGGHCDPKGKLWSTFQVAKKG-DSF 81
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP----INGVVLSWNQEH-------TFSNSS 114
+ + + +L Y + S + + + G+ + ++ T +
Sbjct: 82 YFIMRKDALAITLPELKKYAVFSKIELTDASAFCNLYGIAGAQAEQWLNKTFAITLGEEA 141
Query: 115 FI-------------DERF----SIADVLLHRTWGHNEKIASDI-KTYHELRINHGIVDP 156
RF +D L + H + A+D + L I
Sbjct: 142 VTHLPNGFVMRLIGDTPRFLVLLQKSDASLQQISQHLAEAATDDGSFWDALDILAAAPIV 201
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ S P + +GIS TKGCY GQE V+R ++R ++ I++G +
Sbjct: 202 GA-TMSSVQIPQAFNLQAYDGISFTKGCYTGQETVARAKYRGTNKRAMAILSG-----AT 255
Query: 217 GSPILTDD 224
+ + + D
Sbjct: 256 ATEVNSGD 263
>gi|110834505|ref|YP_693364.1| hypothetical protein ABO_1644 [Alcanivorax borkumensis SK2]
gi|110647616|emb|CAL17092.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 315
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + I+ G+ A +LQ ++ D+ + L+ +G+ L+ I + D ++
Sbjct: 28 DHLAIIRAHGEEAGHYLQGQLSCDLREVDNGGHLTGMHLSLKGRGLVSVRIVRDGND-YL 86
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---INGVVLSWNQEHTFSNSSFIDE----- 118
+ + +++I L+ Y+LR+ V ++ I G+ + S ++
Sbjct: 87 MLCPAGQSEAVIKSLMKYRLRAKVEFQVDNQAVILGLSGALPGALPQPGQSTRNDQGLWL 146
Query: 119 RFSIADVLL----------HRTWGHNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIF 166
R+ D L E+ A + + I+ G +V P +
Sbjct: 147 RYPNTDHALLITHTEQAEAVWAAQAQERTALNGNGWRLADIDAGEGMVYPGAE---DLFL 203
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII--TGTDDLPPSGSPILTDD 224
P D+ G++ KGCY GQEVV+R+ + +++R + T DL P + ++
Sbjct: 204 PQVLNYDVTAGVNFKKGCYTGQEVVARMHFKGKLKQRMQRVDYTADMDLTPGETLRDSNG 263
Query: 225 IEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
G + G AL + R + K L + + P +K
Sbjct: 264 KAAGEVVSSARTPAGHSALVVLRRNTDGVLFKDAEPLNSQLGTLPYTLP--WK 314
>gi|92113953|ref|YP_573881.1| glycine cleavage T protein (aminomethyl transferase)
[Chromohalobacter salexigens DSM 3043]
gi|91797043|gb|ABE59182.1| glycine cleavage T protein (aminomethyl transferase)
[Chromohalobacter salexigens DSM 3043]
Length = 348
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 30/262 (11%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L S +++ G A FLQ +A V A +A +P+G++L + ++E
Sbjct: 38 ALAPLPQFSIMEIAGADAERFLQGQTSAQVTLANGDFAPLTAFCSPKGRMLANGQLMRLE 97
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNS 113
E + L +D + L ++L Y V I + + T
Sbjct: 98 EGRYWLLLDSELIEPLHEQLAKYAAFYKVEISQPAVRTFGVMGRDAADRLESHFTTAPPE 157
Query: 114 SFIDERFSIADVLLHR-----------------TWGHNEKIASDI--KTYHELRINHGIV 154
++ +R A +L H W + + + + I G+
Sbjct: 158 TWGMQRVGQAVLLRHPGPVARYMVIAPEATALEAWQSLQPTTTAVGNAVWRLHDIQAGLA 217
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDL 213
+ P + L GIS KGCY GQEVV+R R ++KR + L
Sbjct: 218 WLGA-AQRDSYLPQMLNWEALAGISFRKGCYTGQEVVARAHFRGQVKKRLQRGRLASHVL 276
Query: 214 PPSGSPIL-TDDIEIGTLGVVV 234
P G+P+ T G +
Sbjct: 277 PAPGTPVEDTAGKSQGEVLSAA 298
>gi|52696236|pdb|1VLY|A Chain A, Crystal Structure Of A Putative Aminomethyltransferase
(Ygfz) From Escherichia Coli At 1.30 A Resolution
Length = 338
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 98/277 (35%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + + + G + + Q +TADV +A +GK + +
Sbjct: 31 LTLXTLDDWALATITGADSEKYXQGQVTADVSQXAEDQHLLAAHCDAKGKXWSNLRLFRD 90
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 91 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 149
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L + G E ++ + + L I
Sbjct: 150 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANXLTDKLRGEAE--LNNSQQWLALNIE 207
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE V+R + R ++ ++ G+
Sbjct: 208 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGS 266
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + +++ G G LA +++
Sbjct: 267 ASRLPEAGEDL---ELKXGENWRRTGTV-LAAVKLED 299
>gi|47168424|pdb|1NRK|A Chain A, Ygfz Protein
Length = 328
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 98/277 (35%), Gaps = 39/277 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + + + G + + Q +TADV +A +GK + +
Sbjct: 22 LTLXTLDDWALATITGADSEKYXQGQVTADVSQXAEDQHLLAAHCDAKGKXWSNLRLFRD 81
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------------- 101
+ +E RS R+ + +L Y + S V I ++
Sbjct: 82 GDGFAWIE-RRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP 140
Query: 102 -----LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ T ERF + A+ L + G E ++ + + L I
Sbjct: 141 SKEKQVVKEGATTLLWFEHPAERFLIVTDEATANXLTDKLRGEAE--LNNSQQWLALNIE 198
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + P + L GIS KGCY GQE V+R + R ++ ++ G+
Sbjct: 199 AGFPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEXVARAKFRGANKRALWLLAGS 257
Query: 211 DD-LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
LP +G + +++ G G LA +++
Sbjct: 258 ASRLPEAGEDL---ELKXGENWRRTGTV-LAAVKLED 290
>gi|308048403|ref|YP_003911969.1| folate-binding protein YgfZ [Ferrimonas balearica DSM 9799]
gi|307630593|gb|ADN74895.1| folate-binding protein YgfZ [Ferrimonas balearica DSM 9799]
Length = 294
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 92/257 (35%), Gaps = 27/257 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LSN I+ G +LQ +T +++ L P+GK++ F +++I
Sbjct: 8 TLVPLSNLGVIRAVGPDTQSYLQGQLTCNLVKLAPDAWTWGGHCDPKGKLITAFRLTRI- 66
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111
ED ++ + + + + + L Y + + V I + V ++ +
Sbjct: 67 EDGVLMLMPKGQLNQDLPALNKYAVFNKVEISDASADYKVYGLLGQNALALLPGEGSVRA 126
Query: 112 ---NSSFIDERFSI----ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ ID ++ AD L + A + + I G +
Sbjct: 127 LEGGVALIDGERAVVVMAADASLPEALAALPQEAEAL--WIASEIEAGRP-WFDEAQCLE 183
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
P +D + GI KGCYIGQE V+R+ R ++ + G P G +
Sbjct: 184 FVPQMLNLDAIGGIQYDKGCYIGQETVARMHFRGGNKRAMYALCG---APAEGDLQMQLG 240
Query: 225 ---IEIGTLGVVVGKKA 238
GTL
Sbjct: 241 ENWRRAGTLVAEADWGG 257
>gi|87118920|ref|ZP_01074819.1| Glycine cleavage T protein [Marinomonas sp. MED121]
gi|86166554|gb|EAQ67820.1| Glycine cleavage T protein [Marinomonas sp. MED121]
Length = 301
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 30/259 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + +K+ G + FLQ + D L A+ +G+++ F + +D +
Sbjct: 21 NDLACLKLSGADTVKFLQGQTSCDFSALSQTQGLQGAVCNIKGRVIANFYALQQADD-IL 79
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADV 125
L + ++L L Y + + + E+ FS I E F
Sbjct: 80 LILASDLVETLQSHLKKYAVFFK-----TALVNATQDYQIEYIFSQDKLIPQEDFPYPCQ 134
Query: 126 LLHRTWGHNEKIASDIKTYHELR-----INHGIVDPNTDFL---------------PSTI 165
L + +++ Y +R G+ D N + +
Sbjct: 135 ELEHNHSLIQICEANVNQYLSIRPTQSSRALGLPDLNDELIGLNLISGHAIINKETSEKF 194
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD--DLPPSGSPILTD 223
P M +G++ KGCY GQE+V+R+Q+R ++K + + + D+P D
Sbjct: 195 IPQMLNMQFTHGVNFKKGCYTGQEIVARMQYRGNLKKHLYLFSAANTLDIPVLAKLTNQD 254
Query: 224 DIEIGTLGVVVGKKALAIA 242
E+ + K A
Sbjct: 255 GKEVAEVITSS-KLGKAYL 272
>gi|169794833|ref|YP_001712626.1| hypothetical protein ABAYE0658 [Acinetobacter baumannii AYE]
gi|213157840|ref|YP_002320638.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057]
gi|215482380|ref|YP_002324562.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii
AB307-0294]
gi|301345760|ref|ZP_07226501.1| hypothetical protein AbauAB0_05935 [Acinetobacter baumannii AB056]
gi|301511540|ref|ZP_07236777.1| hypothetical protein AbauAB05_08168 [Acinetobacter baumannii AB058]
gi|301596697|ref|ZP_07241705.1| hypothetical protein AbauAB059_12802 [Acinetobacter baumannii
AB059]
gi|332852287|ref|ZP_08434092.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150]
gi|332870510|ref|ZP_08439274.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113]
gi|169147760|emb|CAM85623.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057000|gb|ACJ41902.1| hypothetical protein AB57_3324 [Acinetobacter baumannii AB0057]
gi|213986407|gb|ACJ56706.1| hypothetical protein ABBFA_000638 [Acinetobacter baumannii
AB307-0294]
gi|332729417|gb|EGJ60757.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013150]
gi|332732247|gb|EGJ63515.1| folate-binding protein YgfZ [Acinetobacter baumannii 6013113]
Length = 240
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 29/243 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + K
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + L + Y S + + Q V HT +S+
Sbjct: 58 NAESFDIIVTQDQAEELAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + + I G P + + G++
Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211
Query: 241 IAR 243
+A+
Sbjct: 212 VAK 214
>gi|90580316|ref|ZP_01236123.1| hypothetical protein VAS14_20331 [Vibrio angustum S14]
gi|90438618|gb|EAS63802.1| hypothetical protein VAS14_20331 [Vibrio angustum S14]
Length = 327
Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 35/273 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + + + G + +LQ +T D+++L + +A +GK+ I I
Sbjct: 24 LALSKLDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVMRIFHI 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---D 117
+ L+ ++ + I +L Y + S I + LS Q + ++ F D
Sbjct: 84 DNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVVLGLSGEQAQSAIDNYFTGSDD 142
Query: 118 ERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157
R + + H E +A +D ++ I + +
Sbjct: 143 VRHNDTATAVKVDNLRWFIITPIEHAEAVAQHFAANATLTDTALWNLYDIKAALPRVEAA 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216
T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P +
Sbjct: 203 TEL---EFIPQAMNLQSVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259
Query: 217 GSP----ILTDDIEIGTLGVVV---GKKALAIA 242
G + + + GT+ ++ALA+
Sbjct: 260 GDALERSVGENWRKGGTVITGYQFNDQQALALV 292
>gi|294624876|ref|ZP_06703533.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665039|ref|ZP_06730346.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600835|gb|EFF44915.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605196|gb|EFF48540.1| glycine cleavage T-protein aminomethyl transferase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 273
Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 16/260 (6%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 4 VRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPD 63
Query: 72 SKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ +L + R + I + G + + + L
Sbjct: 64 GNAAEIATQLSRFVFRRKLKIVTATLFAYGGFAAPEHAHAARAEIGTQRIELDLGSAALP 123
Query: 129 RTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
RT ++ S + + G+ + P +D L S+
Sbjct: 124 RTLLLYSADALATPIELPSADAQWRTTDLQLGLARL-VEGQREQWTPQQLALDRLQAYSV 182
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY GQE+V+R KR + + T +G + D IGT+ V G ALA
Sbjct: 183 KKGCYPGQEIVARTHFLGKA-KRALQLLETGAAVNAGDAVALDGSAIGTVVSVAGNLALA 241
Query: 241 IARIDKVDHAIKKGMALTVH 260
+ ++ + G AL
Sbjct: 242 VLPLELT---LDAGTALQAG 258
>gi|299768868|ref|YP_003730894.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1]
gi|298698956|gb|ADI89521.1| GcvT-like aminomethyltransferase [Acinetobacter sp. DR1]
Length = 240
Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 29/243 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + KI
Sbjct: 1 MSLLAFSSYAL---NGIDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + + S + + S + +F
Sbjct: 58 NPESFEIVVAQDQAEEFAKHIKKFGAFSKMTL------------------SEQGAVFPKF 99
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ H+T +DI + + I G T P + + G++
Sbjct: 100 -----VNHQT--EFSTTETDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDIEVVNSIANDQGYLALV 211
Query: 241 IAR 243
+A+
Sbjct: 212 VAK 214
>gi|330502433|ref|YP_004379302.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01]
gi|328916719|gb|AEB57550.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina NK-01]
Length = 313
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 39/300 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + A TP+G++L F I + +D
Sbjct: 8 TLLDHEGLLAVRGADAAKFLQGQVTCNLNYLSASQSSLGARCTPKGRMLSSFRIVPV-DD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVV------LSWNQE 107
++L + R +S L Y + S V + + V+ L +
Sbjct: 67 GYLLAMARELIESQQADLQKYAVFSKSKLSDESAAWVRFGLAGGDAVLGELGLQLGTASD 126
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
S I R S L E++ + + + ++ G+
Sbjct: 127 SITSAGPLIAVRLSDGRAELWAPAAETEQLQGRLAAALPQAPLNDWLLAQVRAGVGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSG 217
P + L G+S KGCY GQE+V+R+Q+ +++R + +LP G
Sbjct: 186 GATRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLHRLRLVGSELPAVG 245
Query: 218 SPILTD--DIEIGTL--GVVVGK--KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
+ + +G + G + LA+ + D V+ +G LT+ + +
Sbjct: 246 IELFSPVHGSSVGEVVLAAQAGDAIELLAVLQEDAVNDGRIHLGSSEGPTLTLLDLPYQL 305
>gi|239501762|ref|ZP_04661072.1| hypothetical protein AbauAB_05561 [Acinetobacter baumannii AB900]
gi|260557200|ref|ZP_05829416.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606]
gi|260409306|gb|EEX02608.1| glycine cleavage T protein [Acinetobacter baumannii ATCC 19606]
Length = 240
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + K
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + Y S + + Q V HT +S+
Sbjct: 58 NAESFDIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + + I G P + + G++
Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211
Query: 241 IAR 243
+A+
Sbjct: 212 VAK 214
>gi|184159392|ref|YP_001847731.1| aminomethyltransferase related to GcvT [Acinetobacter baumannii
ACICU]
gi|332876232|ref|ZP_08444007.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059]
gi|183210986|gb|ACC58384.1| predicted aminomethyltransferase related to GcvT [Acinetobacter
baumannii ACICU]
gi|322509304|gb|ADX04758.1| aminomethyltransferase [Acinetobacter baumannii 1656-2]
gi|323519331|gb|ADX93712.1| GcvT-like aminomethyltransferase [Acinetobacter baumannii
TCDC-AB0715]
gi|332735504|gb|EGJ66556.1| folate-binding protein YgfZ [Acinetobacter baumannii 6014059]
Length = 240
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + K
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + Y S + + Q V HT +S+
Sbjct: 58 NAESFEIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + + I G P + + G++
Sbjct: 110 -----------------ETDISEWQKQAIMTGQA-WIAQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDSPAPATQLHNDVEVVNSTQTTDGYIALV 211
Query: 241 IAR 243
+A+
Sbjct: 212 VAK 214
>gi|226328252|ref|ZP_03803770.1| hypothetical protein PROPEN_02145 [Proteus penneri ATCC 35198]
gi|225202985|gb|EEG85339.1| hypothetical protein PROPEN_02145 [Proteus penneri ATCC 35198]
Length = 339
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 96/268 (35%), Gaps = 37/268 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V L S I G + +LQ +T D+ LP +A +GK+ +
Sbjct: 30 LTLVSLDEWSLITATGADSEKYLQGQLTTDIAALPTTTHTLAAHCEAKGKMWSTLRLFHQ 89
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-------------------------IQ 95
+E + + ++ + +L Y + S V + I
Sbjct: 90 QEGFAYI-LRKNVAQKQLAELKKYAVFSKVTLAENTDSVLLGLAGQGAALALADYFPNIP 148
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIA--DVLLHRTWGHNEKIASDIKTYHELRINHGI 153
V++ + + ERF I + + S+ + + L I G
Sbjct: 149 RKANEVVNHDNTYIL-QLPLPTERFLIVTDEETAKNLVATLKAETSNSEQWLALDIEAGY 207
Query: 154 VDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211
+T + P + L I KGCY GQE+VSR + R ++ +++G
Sbjct: 208 PIIDTPNI-EQFLPQATNLQALPLSICFKKGCYTGQEMVSRAKFRGANKRAMYLLSGGGT 266
Query: 212 DLPPSGSPI---LTDDI--EIGTLGVVV 234
+LP G I L +D + GT+ V
Sbjct: 267 ELPEIGGSIEWQLGEDKWRKTGTVLSAV 294
>gi|308446327|ref|XP_003087152.1| hypothetical protein CRE_18393 [Caenorhabditis remanei]
gi|308260738|gb|EFP04691.1| hypothetical protein CRE_18393 [Caenorhabditis remanei]
Length = 240
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 29/249 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + I G AI FLQ +T +V L I + +AI +G+I + KI
Sbjct: 1 MSDLAFSSFTLI---GVDAIKFLQGQVTVNVEALAENITQYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ + + + + + Y S + +E V + N T +++
Sbjct: 58 NPEHLEIVTTQDQAEEFAKHIKKYGAFSKMKLE--ETGRVFPTLNGSTTDFSTT------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + I G N + P + + GI+
Sbjct: 110 -----------------ETDISVWQIAAIQTGQAYINQ-AIEHVFQPQELRLHQREGINY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQEV++R+ + + +I GT P + + + G AL
Sbjct: 152 DKGCYLGQEVIARLWFKAKPKAWLHVIQGTGPAPAQAEQLNKGVQVVNSATFENGYIALV 211
Query: 241 IARIDKVDH 249
+AR D ++
Sbjct: 212 VARPDALEE 220
>gi|330828471|ref|YP_004391423.1| aminomethyltransferase [Aeromonas veronii B565]
gi|328803607|gb|AEB48806.1| aminomethyltransferase [Aeromonas veronii B565]
Length = 302
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 18/232 (7%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+ + ++ G+ + +LQ +T DV L P+GK+ F + +++
Sbjct: 16 SLTKLAITRISGQDRVKYLQGQVTCDVNALQPGQQTAGGHCDPKGKLWSNFRLLCLDDSL 75
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFSI 122
+ S + + +L + + S V I G+ + + + +
Sbjct: 76 LL-LTSPSVLERQLPELKKFAVFSKVEIAADERHATGIAGTGSDAWIAAQFGLLQSGLID 134
Query: 123 AD---------VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
LL + D + L I G+ P +
Sbjct: 135 GGMAVKIEQDRWLLVSNQQADALPQGDESLWWGLEIKAGLPHMEA-VHQGEFIPQMLNLQ 193
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
L+GIS KGCY+GQE V+R ++R + ++ GT +G P+ + D
Sbjct: 194 ALDGISFNKGCYMGQETVARAKYRGANNRALFLLAGT-----TGEPVASGDT 240
>gi|293611027|ref|ZP_06693326.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826679|gb|EFF85045.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 240
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 31/244 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + K+
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKM 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-INGVVLSWNQEHTFSNSSFIDER 119
++F + + + + + + Y S + + Q + V++ E T +
Sbjct: 58 NPESFEIVVTQDQAEEFAKHIKKYGAFSKMTLSEQGAVFPKVVNHQTEFTTAE------- 110
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+DI + + I G T P + + G++
Sbjct: 111 -------------------TDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVN 150
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
KGCY+GQE+V+R+ + + ++ GT + P S + + D + ++ AL
Sbjct: 151 YDKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPASATQLNNDVEVVNSIANDESYLAL 210
Query: 240 AIAR 243
+A+
Sbjct: 211 VVAK 214
>gi|169632509|ref|YP_001706245.1| hypothetical protein ABSDF0627 [Acinetobacter baumannii SDF]
gi|169151301|emb|CAP00005.1| conserved hypothetical protein [Acinetobacter baumannii]
gi|193078266|gb|ABO13230.2| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978]
Length = 240
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + K
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKN 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + Y S + + Q V HT +S+
Sbjct: 58 NAESFDIIVTQDQAEEFAKHIKKYGAFSKMTLSEQG--AVFPKVVNGHTEFSST------ 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + + I G P + + G++
Sbjct: 110 -----------------ETDISEWQKQAIVTGQA-WIAQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT D P + + D + + G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALV 211
Query: 241 IAR 243
+A+
Sbjct: 212 VAK 214
>gi|188576489|ref|YP_001913418.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520941|gb|ACD58886.1| glycine cleavage T-protein (aminomethyl transferase) [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 268
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 101/265 (38%), Gaps = 14/265 (5%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMLLPDGNAA 62
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER---FSIADVLLHRTWG 132
+ +L + R + I + E + + + + + L RT
Sbjct: 63 EIAAQLGRFVFRRKLKISTAALFAFGGFAAPERARAAQADLGTQRIVLDLGSAALPRTLL 122
Query: 133 --HNEKIASDIKT------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
E +A+ I+ + + G+ + P +D L S+ KGC
Sbjct: 123 LYAEEALAAPIEAPSVDAQWRRADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ +
Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLETDSAVEAGDAVAMDGAAIGTVVSVAGNLALAVLPL 240
Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269
+ A A HG R +A P
Sbjct: 241 ELTLDADTPLQA-GAHGARPRAIAP 264
>gi|294634850|ref|ZP_06713372.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685]
gi|291091723|gb|EFE24284.1| folate-binding protein YgfZ [Edwardsiella tarda ATCC 23685]
Length = 344
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 93/274 (33%), Gaps = 36/274 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L++ + V G A +LQ +T DV L + A +GK+ + +
Sbjct: 33 LTLMALTDWQLVGVSGADAQSYLQGQLTLDVPALTAQQHALCAHCDAKGKLWSTLRLWRR 92
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ L + RS + + +L Y + S V + +P + +VL +
Sbjct: 93 ADGFAYL-LRRSVAEIQLLELKKYAVFSKVTLADEP-HAIVLGLAGAQAREALGELFSEL 150
Query: 121 SIADVLLHRTWG------------------------------HNEKIASDIKTYHELRIN 150
A L + SD + L I
Sbjct: 151 PDAACPLRQAAHSQLLFLAEPQPRYLLICDDEDEAKRIIQQLSGRARLSDGAQWLALDIE 210
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + P + L GI KGCY GQE+V+R + R R+ + G+
Sbjct: 211 AGLA-IIDEASSDQFLPQAINLQALGGICFNKGCYSGQEMVARAKFRGANRRALFWLRGS 269
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
P S L ++ +G G LA R+
Sbjct: 270 AGRLPHASEDL--ELRLGDSWRRSGTV-LAALRL 300
>gi|33596201|ref|NP_883844.1| hypothetical protein BPP1557 [Bordetella parapertussis 12822]
gi|33601612|ref|NP_889172.1| hypothetical protein BB2635 [Bordetella bronchiseptica RB50]
gi|33573204|emb|CAE36859.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33576049|emb|CAE33128.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 338
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 45/285 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI- 60
L++ I G A+ FL +T DV P AR + T +G++L ++ +
Sbjct: 17 QCAPLASLRVIGAAGADALAFLHGQLTQDVTGQPADHARLAGYCTAKGRLLATLVMWRAA 76
Query: 61 ----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------- 102
+ + ++++ +L + LR+ + P +
Sbjct: 77 AADESAPVWQALVRADVAEAVLKRLSMFVLRAKARLAPVPAWAAGVQCAPAALAALQDAA 136
Query: 103 ------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI----------ASDIKTYHE 146
+ Q ++I + A + + +
Sbjct: 137 GGALPAAPWQRAELPTGTWIGAPSADAQPRWWWIATEAQLERAGALAAHLGRASESAWQA 196
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-- 204
+ G+ P +DL+ G+S TKGCY GQEVV+R +R +++R
Sbjct: 197 ADLAAGLPWIGA-ATQDVFIPQTVNLDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAH 255
Query: 205 -MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKK----ALAIA 242
+I DLP G I G VV LA+
Sbjct: 256 GVIAEAPADLPDPLAGQDIYDSARPDEPCGRVVDAARSDGQLALL 300
>gi|159481016|ref|XP_001698578.1| hypothetical protein CHLREDRAFT_187731 [Chlamydomonas reinhardtii]
gi|158282318|gb|EDP08071.1| predicted protein [Chlamydomonas reinhardtii]
Length = 816
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59
+L+++ + G A+ FLQ ++T DV L P + + +LTP+GK L IS+
Sbjct: 47 AHLTSRGVLLAEGPQALTFLQGMVTNDVRPLQTAGPAEPPVYATVLTPKGKFLHDLFISR 106
Query: 60 IEE--DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ D +LE+D + + + L
Sbjct: 107 HPDMPDALLLEVDAAGATAAMQLLNK---------------------------------- 132
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+A G A+ + Y R + G+ + + P D +D+L G
Sbjct: 133 --PLVAAGPAPAAAGLQSASAAGEEAYRAWRYSLGVAEGEAEIPAGQAAPLDFNVDVLRG 190
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+S TKGCY+GQE S +R +IRKR M +
Sbjct: 191 VSYTKGCYVGQERNSFTHYRGVIRKRLMPVRLE 223
>gi|332284309|ref|YP_004416220.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7]
gi|330428262|gb|AEC19596.1| hypothetical protein PT7_1056 [Pusillimonas sp. T7-7]
Length = 348
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 49/249 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ + I++ G A FL ++ D+ +L A + T +G++L ++ +
Sbjct: 7 ATSLSDLAVIEISGADAASFLHGQLSHDISSLLPGQAHLAGYCTAKGRLLGSMVVWPVSG 66
Query: 63 ---DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWNQE---------- 107
T I +S++ +L + LR+ + + P+ G+ L+ + +
Sbjct: 67 AEVPTLRALIKADIAESVVKRLSMFVLRAKAKLSVTQTPVLGLSLAVDADSRQNIAPAQP 126
Query: 108 ------HTFSNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDI-- 141
+ + + + + + +D
Sbjct: 127 TGAQAGAILAEQAATLPKNPLPFTVIYTEAGDWISAVGAEGEPVRWWLAAASAVDADYFP 186
Query: 142 -------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ I G+ P +DL++G+S TKGCY GQEVV+R
Sbjct: 187 DTGEAGRSAWQAADIAAGLP-WVQAATQDVFIPQTLNLDLIDGVSFTKGCYPGQEVVARS 245
Query: 195 QHRNIIRKR 203
+R +++R
Sbjct: 246 HYRGTVKRR 254
>gi|262281154|ref|ZP_06058936.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257385|gb|EEY76121.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 240
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 29/249 (11%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + S+ + G A FLQ +T D L R +AI +G+I + KI
Sbjct: 1 MSLLAFSSYAL---NGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKI 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++F + + + + + + + S + + Q F
Sbjct: 58 NAESFEIVVVQDQAEEFAKHIKKFGAFSKMTLSEQG---------------------PAF 96
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ H+T + +DI + + I G T P + + G++
Sbjct: 97 PK--ISGHQT--EFSALETDISEWQKQAIMTGQA-WITQATEHEFQPQELRLHQREGVNY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ GT + P + + + D + ++ G AL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVQGTGEAPAAKAQLHNDIEVVNSVANEEGYLALV 211
Query: 241 IARIDKVDH 249
+A+ ++
Sbjct: 212 VAKPAALEE 220
>gi|15805387|ref|NP_294081.1| hypothetical protein DR_0358 [Deinococcus radiodurans R1]
gi|6458035|gb|AAF09938.1|AE001896_3 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 303
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/292 (22%), Positives = 108/292 (36%), Gaps = 37/292 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + +V G F+ +T D+ P A L +G+I + + +D
Sbjct: 18 TRLPSSGL-RVTGADRTDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRRPDD 76
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE---- 118
L +D + L +L Y + V +E + + V W+Q + +
Sbjct: 77 -IYLHLDAGQAPLLAARLRRYIIFDQVELEDVSEVLRTVHVWDQAVPGWDDAGAGAQQWT 135
Query: 119 ------------RFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTD 159
R V LH E + + + LR+ GI D D
Sbjct: 136 LGGSLVLGGRVNRSGQPGVDLHYLARDEEAVLAALGGEERPLSELDALRVAAGIPDIQRD 195
Query: 160 FLPSTIFPHDALMDLLN---GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
L T P + +D+ IS KGCY+GQE+++RI+ R R + G PS
Sbjct: 196 GLTGT-LPQEVGLDVSGPLPAISYRKGCYVGQEIMARIEARGQTRFHLARVAGEG--LPS 252
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ I D +G G+ G ALA R + ++ G A+ V GV +
Sbjct: 253 HAEIRQGDKVVGQSGLSTGPLALARLRRE-----LEDGAAVEVGGVSARVQL 299
>gi|325917570|ref|ZP_08179770.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937]
gi|325536204|gb|EGD08000.1| folate-binding protein YgfZ [Xanthomonas vesicatoria ATCC 35937]
Length = 289
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 17/259 (6%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 14 SLHDMQYVRLVGTDAVAFAHAQFANDVQALEIGQWQWNAWLTAKGRVIAIFALLREDDTQ 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---ERFS 121
++ + K D + +L + R + I ++ Q + + D +R +
Sbjct: 74 VLMLLPDGKADEIAAQLGRFVFRRKLKINATRLS--AYGGFQAPDLAKGAHADIGTQRIA 131
Query: 122 I----ADVLLHRTWGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+ A V + +A+ I+ + ++ G+V D P
Sbjct: 132 LDMGSAAVPRTLLIFSADALAAPIELPNMDAQWRRADLHLGLVRLP-DAQREQWTPQQLA 190
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+D L S+ KGCY GQE+V+R KR + + T+ +G + D IGT+
Sbjct: 191 LDRLQAFSVKKGCYPGQEIVARTHFLGKA-KRALQLLETEAAVQAGDSVELDGAAIGTVV 249
Query: 232 VVVGKKALAIARIDKVDHA 250
V G ALA+ ++ A
Sbjct: 250 SVAGDLALAVLPLELTVDA 268
>gi|120555181|ref|YP_959532.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter
aquaeolei VT8]
gi|120325030|gb|ABM19345.1| glycine cleavage T-protein (aminomethyl transferase) [Marinobacter
aquaeolei VT8]
Length = 326
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 104/302 (34%), Gaps = 37/302 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L+++ ++ G F+Q + +V + + +A TP+G+ + + ED
Sbjct: 18 AHLTDRVLARISGPGTDKFVQGQFSQNVDEVTSGQSLRAAACTPKGRAYCITRLVRDGED 77
Query: 64 TFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L ++R + + L Y L + + + E + + +
Sbjct: 78 -LLLSLERETAEDTVKHLNKYLMLFRGTSLGVLDSGRITGLLGIETARQVAGAATDELTR 136
Query: 123 ADVLLHRTWGHNEKIASD-------------------------IKTYHELRINHGIVDPN 157
+L G+ ++ D ++T+ + G+
Sbjct: 137 PGQVLSTDNGYLIRVEDDSDHCARFELWQTDAQPDLLPSSELSLQTWLASEVRAGVP-WL 195
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPP 215
T P + L GI KGCY GQEV++R+ ++K + GT+ P
Sbjct: 196 TAATREAYVPQMLNLQHLQGIHFKKGCYTGQEVIARMHFLGQLKKSLFRVAFNGTEAAPQ 255
Query: 216 SGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDH--AIKKGMALTVHGVRVKASF 268
G+ ++ D +G + V + LA+ R D + L + +
Sbjct: 256 PGTRLIADGSAVGEVVNSVLTGEQQGEMLAVIRHDAASKHLGVDGHEGLQLEMRPIPYPV 315
Query: 269 PH 270
P
Sbjct: 316 PE 317
>gi|296390892|ref|ZP_06880367.1| hypothetical protein PaerPAb_22175 [Pseudomonas aeruginosa PAb1]
Length = 314
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + +L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLAELKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|71279144|ref|YP_270787.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H]
gi|118577992|sp|Q47WN5|YGFZ_COLP3 RecName: Full=tRNA-modifying protein ygfZ
gi|71144884|gb|AAZ25357.1| putative aminomethyltransferase [Colwellia psychrerythraea 34H]
Length = 324
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 30/253 (11%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS I + G+ +LQ +T DV ++ A +GK+ F +
Sbjct: 20 LIELSEFGAISLSGEEQSKYLQGQVTCDVNSITESNLLVGAHCDAKGKVFSVFRLINRSS 79
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFID- 117
+L+ + + + +L + + + V I+I G + ++ + S D
Sbjct: 80 AHLLLQ-PTASIEGSLKELKKFGVFAKVTIDIAEELGFIALIGKQASSLIQQEFSQVPDS 138
Query: 118 -------------------ERFSIAD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
R+ I D + ++ L I G
Sbjct: 139 LTPVVQIGSTSLVYLSGEQPRYIIIDDKATITAITEKLALPTYSQSVWNLLEITQGFPIL 198
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ P + +NGIS TKGCY+GQE V+R+Q+ ++ + + P
Sbjct: 199 TAN-TSGHYVPQMLNLQAINGISFTKGCYLGQETVARMQYLGKNKRALFCLNSQLEQPFQ 257
Query: 217 GSPILTDDIEIGT 229
++ + ++G
Sbjct: 258 SDDVI--EKQLGE 268
>gi|313105580|ref|ZP_07791846.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa
39016]
gi|310878348|gb|EFQ36942.1| hypothetical protein PA39016_000080016 [Pseudomonas aeruginosa
39016]
Length = 314
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + +L Y + S + + + + + I+
Sbjct: 67 GLLLAMAGELLEAQLAELKKYAVFSKASLADESAAWLRVGLRDAGEALRALGIEAPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ G+
Sbjct: 127 RIARHGDLLAVALGDARAELWIPAQRAETVLATLREHSREAPLDDWLLGQVRAGVGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + G D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALGGDEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|89075098|ref|ZP_01161539.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34]
gi|89049185|gb|EAR54750.1| hypothetical protein SKA34_21920 [Photobacterium sp. SKA34]
Length = 327
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 106/273 (38%), Gaps = 35/273 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + + + G + +LQ +T D+++L + +A +GK+ I I
Sbjct: 24 LALSKLDDWGMVTLIGADSKAYLQGQLTCDLVSLEASKSTLAAHCDAKGKMRTVIRIFHI 83
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---D 117
+ L+ ++ + I +L Y + S I LS Q + ++ F D
Sbjct: 84 DNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVIFGLSGEQAQSAIDNYFTGSDD 142
Query: 118 ERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV--DPN 157
R + + H E +A +D ++ I + +
Sbjct: 143 VRHNDTATAVKVDNLRWFIITPMEHAEAVAQHFAANATLTDTALWNLYDIKAVLPRVEAA 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPS 216
T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G P +
Sbjct: 203 TEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGESTQCPQA 259
Query: 217 GSP----ILTDDIEIGTLGVVV---GKKALAIA 242
G + + + GT+ ++ALA+
Sbjct: 260 GDALERSVGENWRKGGTVITGYQFNDQQALALV 292
>gi|78047795|ref|YP_363970.1| putative aminomethyl transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036225|emb|CAJ23916.1| putative aminomethyl transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 290
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 101/267 (37%), Gaps = 16/267 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 14 SLHDMQYVRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVIAIFALLREDDAH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-FSNSSFIDERFS-- 121
++ + + +L + R + I + EH + + +R
Sbjct: 74 LLMLLPDGNSAEIAAQLSRFVFRRKLKISAAALLAYGGFVAPEHAHAAQADLGTQRIELD 133
Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ L RT ++ S + + G+ + P +D
Sbjct: 134 LGSAALPRTLLLYSPDALAMPIELPSAQAQWRTTDLQLGLARL-VESQREQWTPQQLALD 192
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V
Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRVLQLLETDAAVDAGDAVALDGSAIGTVVSV 251
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVH 260
G ALA+ ++ + G AL
Sbjct: 252 AGNLALAVLPLELT---LDAGAALQAG 275
>gi|21242812|ref|NP_642394.1| hypothetical protein XAC2074 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108298|gb|AAM36930.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 290
Score = 154 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 99/267 (37%), Gaps = 16/267 (5%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L + ++++ G A+ F A DV L + +A LT +G+++ F + + ++
Sbjct: 14 SLHDMQYVRLAGTDAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAH 73
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFS 121
++ + + +L + R + I I + G + +
Sbjct: 74 LLMLLPDGNAAEIATQLSRFVFRRKLKIGIATLFAYGGFAAPEHAHAARAEIGTQRIELD 133
Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ L RT ++ S + + G+ + P +D
Sbjct: 134 LGSTALPRTLLLYSADALATPIELPSADAQWRTTDLQLGLARL-VEGQREQWTPQQLALD 192
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
L S+ KGCY GQE+V+R KR + + TD +G + D IGT+ V
Sbjct: 193 RLQAYSVKKGCYPGQEIVARTHFLGKA-KRALQLLETDAAVDAGDAVALDGSAIGTVVSV 251
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVH 260
G ALA+ ++ + G AL
Sbjct: 252 AGNLALAVLPLELT---LDAGTALQAG 275
>gi|257453607|ref|ZP_05618897.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60]
gi|257449065|gb|EEV24018.1| glycine cleavage T protein [Enhydrobacter aerosaccus SK60]
Length = 242
Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 28/248 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + G A FLQ +T +V L + +AI +G++ L I KI +D +
Sbjct: 1 MTDFVVFDITGADAQKFLQGQVTCNVTKL-SDQFQATAISNLKGRVALGIWIKKIADDAY 59
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ I + D + Y S + + P + + N +FS S
Sbjct: 60 QIVISQDCADEFAKHIKKYAAFSKLTLS-APRDIFAVIDNGVSSFSES------------ 106
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHG---IVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ D K + + I G IV P + + G+ K
Sbjct: 107 ------ENGTDTDVDRKAWQKASIATGNYWIVKTTAGLWQ----PQELRLHQQGGVDYDK 156
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
GCY+GQE+++R+ + + + GT D+P +G I + D+ + ++ G +AL +A
Sbjct: 157 GCYLGQEIIARLYFKASPKAWLHRVAGTGDIPNAGEKIGSVDV-VNSIATDTGFEALVVA 215
Query: 243 RIDKVDHA 250
R D + +
Sbjct: 216 RPDDIAAS 223
>gi|254239121|ref|ZP_04932444.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254245013|ref|ZP_04938335.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|126171052|gb|EAZ56563.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198391|gb|EAZ62454.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 314
Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|107100219|ref|ZP_01364137.1| hypothetical protein PaerPA_01001242 [Pseudomonas aeruginosa PACS2]
Length = 314
Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLTDESAAWLRIGLRDASEALRALGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|149374722|ref|ZP_01892496.1| predicted aminomethyltransferase [Marinobacter algicola DG893]
gi|149361425|gb|EDM49875.1| predicted aminomethyltransferase [Marinobacter algicola DG893]
Length = 332
Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 40/292 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V +S++ +++ G FLQ + + + + +A TP+G+ + + +
Sbjct: 18 YVSVSDRVMVRITGPGTNKFLQGQFSQQIDDVTQDHSPRAAACTPKGRAYCLTRLVRDGD 77
Query: 63 DTFILEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPIN-------------------GVVL 102
D ++E+ + + + L Y L +EI+P G +
Sbjct: 78 D-VLMELPAALSEGTVTHLRKYLMLFRGTSMEIEPDARILGLLGEAAAEKLLPGNTGALA 136
Query: 103 SWNQEHTFSNSSFI---DERFSIADVLLHRTWGHN--------EKIASDIKTYHELRINH 151
+ + I D +A L +T G + + A+ + + I
Sbjct: 137 AAGDSVKINGGHLIRTMDTAEGMARYELWQTGGLDTSLQQSLKDLPAAPLADWQASEIAA 196
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ T + P + GI KGCY GQEV++R+ ++K T +D
Sbjct: 197 GVASLTT-ATTESFVPQMLNWQHVGGIHFKKGCYTGQEVIARMHFLGQLKKSLFRFTCSD 255
Query: 212 D--LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMA 256
LP G +L + +G + V + LA+ R D + ++ A
Sbjct: 256 AGSLPAPGEALLDGERAVGNVVNSVHFSDGHSEILAVVRHDAAEKSLVPESA 307
>gi|15595956|ref|NP_249450.1| hypothetical protein PA0759 [Pseudomonas aeruginosa PAO1]
gi|9946647|gb|AAG04148.1|AE004511_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 314
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDGRVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|218893298|ref|YP_002442167.1| hypothetical protein PLES_45841 [Pseudomonas aeruginosa LESB58]
gi|218773526|emb|CAW29338.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 314
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLTDESAAWLRIGLRDASEALRTLGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|33592903|ref|NP_880547.1| hypothetical protein BP1845 [Bordetella pertussis Tohama I]
gi|33572551|emb|CAE42131.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332382316|gb|AEE67163.1| hypothetical protein BPTD_1822 [Bordetella pertussis CS]
Length = 338
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 45/285 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--- 58
L++ I G A+ FL +T DV P AR + T +G++L ++
Sbjct: 17 QCAPLASLRVIGAAGADALAFLHGQLTQDVTGQPADHARLAGYCTAKGRLLATLVMWLAA 76
Query: 59 --KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------- 102
+ + ++++ +L + LR+ + P +
Sbjct: 77 AADESAPVWQALVRADVAEAVLKRLSMFVLRAKARLAPVPAWAAGVQCAPAALAALQDAA 136
Query: 103 ------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI----------ASDIKTYHE 146
+ Q ++I + A + + +
Sbjct: 137 GGALPAAPWQRAELPTGTWIGAPSADAQPRWWWIATEAQLERAGALAAHLGRASESAWQA 196
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-- 204
+ G+ P +DL+ G+S TKGCY GQEVV+R +R +++R
Sbjct: 197 ADLAAGLPWIGA-ATQDVFIPQTVNLDLIGGVSFTKGCYPGQEVVARSHYRGTVKRRMAH 255
Query: 205 -MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKK----ALAIA 242
+I DLP G I G VV LA+
Sbjct: 256 GVIAEAPADLPDPLAGQDIYDSARPDEPCGRVVDAARSDGQLALL 300
>gi|116048674|ref|YP_792526.1| hypothetical protein PA14_54480 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115583895|gb|ABJ09910.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 314
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 30/255 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + +G++L F I E D
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCNIKGRLLSSFRILP-EGD 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
+L + ++ + L Y + S + + + + + ID
Sbjct: 67 GLLLAMAGELLEAQLADLKKYAVFSKASLADESAAWLRIGLRDASEALRALGIDTPAESG 126
Query: 119 RFSIADVLLHRTWGHNEKI--------------------ASDIKTYHELRINHGIVDPNT 158
R + LL G + + + ++ GI
Sbjct: 127 RIARHGDLLAVALGDARVELWVPAQRAEAVLARLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPPSG 217
P + + G+S KGCY GQE+V+R+Q+ +++R + D++P G
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALDADEVPAPG 245
Query: 218 SPILTD--DIEIGTL 230
+ + + +G +
Sbjct: 246 TGLFSPVHSTSVGEV 260
>gi|114777736|ref|ZP_01452696.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus
ferrooxydans PV-1]
gi|114551952|gb|EAU54486.1| Glycine cleavage T protein (aminomethyl transferase) [Mariprofundus
ferrooxydans PV-1]
Length = 318
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 38/288 (13%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N S +K G + +LQ IT D+ L A +A+LTPQGK + I + D IL
Sbjct: 27 NWSVLKASGPTVRDYLQGQITQDMNRLSADCAIHTALLTPQGKAVTELYIIEGNNDELIL 86
Query: 68 EIDRSKRDSLIDKLLFYK----LRSNVI--IEIQPINGVVLSWNQEHTFSNSS----FID 117
S + + +L + LR V+ + I + G E
Sbjct: 87 LTPASYATATVARLRQFALGQELRIGVVEALAICSLQGTHAHSQLESFALPEPDEMWLAT 146
Query: 118 ERFSIAD----VLLHRTWGH-------------NEKIASDIKTYHELRINHGIVDPNTDF 160
R D V+ H G+ + + + + +RI G D ++
Sbjct: 147 SRNPETDCFAIVMPHHPRGYWVVTAATSIRAVVSRQPEVEQNAFEAMRIIRGFPDFGIEW 206
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
+ I P +A + +G+S KGCY+GQEV SR+ R I+K+ ++ PI
Sbjct: 207 -DAAIHPLNANLVEFDGVSFEKGCYVGQEVTSRMHWRGGIKKKLYRVSVDGRPDTLPCPI 265
Query: 221 LTDDIEIGTLGVVVGKK-----ALAIARIDKVDHA----IKKGMALTV 259
T + IG L + +A+ I+ + A ++ G L V
Sbjct: 266 RTS-VNIGELKSAAIDQENRCIGIALLPIETAESATALSLENGATLHV 312
>gi|77359673|ref|YP_339248.1| transcriptional regulator [Pseudoalteromonas haloplanktis TAC125]
gi|76874584|emb|CAI85805.1| putative one-carbon metabolism transcriptional regulator, COG 354,
highly conserved in phylogeny [Pseudoalteromonas
haloplanktis TAC125]
Length = 303
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 94/243 (38%), Gaps = 43/243 (17%)
Query: 1 MSSVY---LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
MS V+ LS+ I G + +L IT D+ L + + +GK+ F +
Sbjct: 1 MSIVHACALSH-QLISFSGADKLSYLHGQITQDINKLTNNNYLWAGHCSAKGKLWGVFKL 59
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP-----------------INGV 100
+D + L +++ + + +L Y + + V I + P +N
Sbjct: 60 F-SHQDHYYLIGSKAEVECSLAELKKYAVFAKVDINVAPQRLIGLISDDFTELLTQLNIE 118
Query: 101 VLSWNQEHTFSNSSF-----------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ + FS+ +DE+F++ D ++ + + + I
Sbjct: 119 FAAQDTACDFSHGKALKLTGNRLLLMVDEQFNLPDNVV---------TLENDMLWQQAAI 169
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G N + P + ++GIS KGCY GQE V+R+++ ++ I++G
Sbjct: 170 LAGEPQLNEQAI-GEYVPQMVNLQAIDGISFKKGCYAGQETVARMKYLGKNKRAMYIVSG 228
Query: 210 TDD 212
D
Sbjct: 229 QSD 231
>gi|146306495|ref|YP_001186960.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp]
gi|145574696|gb|ABP84228.1| GcvT-like aminomethyltransferase [Pseudomonas mendocina ymp]
Length = 313
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/279 (20%), Positives = 105/279 (37%), Gaps = 34/279 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L A TP+G++L F I + ED
Sbjct: 8 TLLDHEGLLAVRGPDAGKFLQGQLTCNLSYLSASQTSLGARCTPKGRMLSSFRIVPV-ED 66
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN----------VII------EIQPINGVVLSWNQE 107
++L + R + + L Y + S V + G+V + +
Sbjct: 67 GYLLAMARELIEPQLADLQKYAVFSKSKLGDESAAWVRFGLSGGDAVLSELGLVPGDHAD 126
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNT 158
S + R V L E + + + + ++ G+
Sbjct: 127 ALASAEGLLAVRLGDGRVELWAAVDKAEHLHAVLSRHLPQAPLNLWLLAQVRAGVGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDLPPSG 217
P + L G+S KGCY GQE+V+R+Q+ + R+ + G ++P +G
Sbjct: 186 GATRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLRLGGTEVPSAG 245
Query: 218 SPILTD--DIEIGTLGVVV----GKKALAIARIDKVDHA 250
+ + + +G + + G + LA+ + D V
Sbjct: 246 TELFSPVHASSVGEVVLAAQAEDGVELLAVLQEDAVTDG 284
>gi|325920389|ref|ZP_08182320.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865]
gi|325549136|gb|EGD20059.1| folate-binding protein YgfZ [Xanthomonas gardneri ATCC 19865]
Length = 273
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 13/256 (5%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A+ F A DV L + + LT +G+++ F + + ++ ++ +
Sbjct: 4 VRLIGMDAVAFAHAQFANDVQALAVGQWQWNTWLTAKGRVIAIFALLREDDTHVLMLLPD 63
Query: 72 SKRDSLIDKLLFYKLRSNVII---EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ +L + R + I + G + + ++ + L
Sbjct: 64 GNAAEIALQLGRFVFRRKLKIVGAALSAYGGFEPAQRAQGAQADIGTQRIELDMGTAALP 123
Query: 129 RT--WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
RT ++ +A+ I+ + + G+V D P +D L+ S+
Sbjct: 124 RTLLLHTDQALAAPIEVPGVDAQWRRADLQLGLVRLP-DAQREQWTPQQLALDRLHAFSV 182
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY GQE+V+R ++ ++ + +G + D IGTL V G ALA
Sbjct: 183 KKGCYPGQEIVARTHFLGKAKRALQLLEVDGAI-EAGDAVTLDGTAIGTLVSVAGTLALA 241
Query: 241 IARIDKVDHAIKKGMA 256
+ ++ A A
Sbjct: 242 VLPLELTLDATTALQA 257
>gi|294651372|ref|ZP_06728690.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822727|gb|EFF81612.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 240
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 26/231 (11%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A FLQ +T V L +R +AI +G+I I KI ++F L +
Sbjct: 10 SLNGVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQD 69
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
+ + + + S + +E I V + N T
Sbjct: 70 QAEEFAKHIRKFGAFSKMKLE--EIGQVFPTVNGIQT----------------------- 104
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
K +DI + I G T P + + G+ KGCY+GQE+V+
Sbjct: 105 EFSKSETDINAWQIQAIQSGQA-WITQTTEHLFQPQELRLHQREGVHFDKGCYLGQEIVA 163
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
R+ + + +I G + PP + + D + ++ G AL +A+
Sbjct: 164 RLWFKAKPKHWLHLIQGKETTPPPATQLNKDVEVVNSIAFEGGYIALVVAK 214
>gi|254514102|ref|ZP_05126163.1| glycine cleavage T protein [gamma proteobacterium NOR5-3]
gi|219676345|gb|EED32710.1| glycine cleavage T protein [gamma proteobacterium NOR5-3]
Length = 302
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 31/255 (12%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +L ++ I + G FLQ +T D L IA A+ +G++L L+ ++ +
Sbjct: 5 ACFLPKEAMIHLRGSKIPEFLQGQLTCDTRKLSPGIAVMGALCNVKGRVLSDLLVVQVSD 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+L + RS S+ D L Y S + +E ++ + +
Sbjct: 65 THVVLRLRRSLATSVADTLRRYAQFSRISVEPDSREDAIVGLRESVVTPTPDALPAGHMA 124
Query: 123 ADVL-----LHRTWGHNEKIASDI--------------------KTYHELRINHGIVDPN 157
A + L RT G +E ++ D LR H V+
Sbjct: 125 ASIRTGTVTLQRTPGLSEILSVDPDNPIDLADTLNERTMDAEPRWAMETLRSGHYAVELE 184
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PP 215
P DL ++ KGCY GQE+V+R+ ++ ++R I + + P
Sbjct: 185 D---LGAFTPQALNYDLTGLVAFNKGCYTGQEIVARLHYKGQSKRRLQIFETPESVNGPA 241
Query: 216 SGSPI-LTDDIEIGT 229
+P+ ++ +G
Sbjct: 242 RDTPLQTSEGDTVGR 256
>gi|226951689|ref|ZP_03822153.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter
sp. ATCC 27244]
gi|226837554|gb|EEH69937.1| glycine cleavage T protein (aminomethyl transferase) [Acinetobacter
sp. ATCC 27244]
Length = 240
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 26/231 (11%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A FLQ +T V L +R +AI +G+I I KI ++F L +
Sbjct: 10 SLNGVDAQKFLQGQVTVHVERLVENESRYTAICDLKGRIHFGLWIKKINSESFELVTTQD 69
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
+ + + + S + +E I V + N T +++
Sbjct: 70 QAEEFAKHIRKFGAFSKMKLE--EIGQVFPTVNGIQTDFSTT------------------ 109
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+DI T+ I G T P + + G+ KGCY+GQE+V+
Sbjct: 110 -----ETDINTWQVQAIQSGQA-WITQTTEHLFQPQELRLHQREGVHFDKGCYLGQEIVA 163
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
R+ + + +I G + P + + D + ++ G AL IA+
Sbjct: 164 RLWFKAKPKHWLHLIQGKETTPAPATQLNKDVEVVNSIAFDNGYLALVIAK 214
>gi|311693662|gb|ADP96535.1| glycine cleavage T-protein (aminomethyl transferase) [marine
bacterium HP15]
Length = 331
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 38/303 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L N+ + V G FLQ + ++ + + + +A TP+G+ + + +D
Sbjct: 22 ADLDNRVVVCVSGPGTDKFLQGQFSQNLDEVIPEYSPRAAAATPKGRAYCLTRMVRSGDD 81
Query: 64 TFILEIDRSKRDSLIDKLLFY-KLRS----------NVIIEIQPINGVVLSW-------- 104
+++ D +I L Y L + + L+
Sbjct: 82 -ILMDFPAELADDIISHLRKYLMLFRGTTMEVVQETKITGILGNGLAETLAGKPLDSLKE 140
Query: 105 -NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDP 156
T + + + + W + E A+ + I G+
Sbjct: 141 PGDACTLPDGILVKTQSTAEGTPRFEFWHNEEGEAALPASARMSAADWQASEIAAGVASL 200
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLP 214
T + P + G+ KGCY GQEV++R+ ++K I ++DLP
Sbjct: 201 TT-ATQESFVPQMLNWQHVGGVHFKKGCYTGQEVIARMHFLGQLKKSLFRFRIEQSEDLP 259
Query: 215 PSGSPILTDDIEIGTLGVVVGKKA-----LAIARIDKVDHAIKKG--MALTVHGVRVKAS 267
G+ + + +G + + + LA+ R D ++A+ +T+ + +
Sbjct: 260 TPGTALFAGERSVGEVVNAIKYRDGSVELLAVVRHDAAENALHPEGLSEVTLEPMPLPYP 319
Query: 268 FPH 270
P
Sbjct: 320 VPE 322
>gi|302831836|ref|XP_002947483.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f.
nagariensis]
gi|300267347|gb|EFJ51531.1| hypothetical protein VOLCADRAFT_103444 [Volvox carteri f.
nagariensis]
Length = 504
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 96/281 (34%), Gaps = 62/281 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59
L+++ ++ G + FLQ I++ DV L P + + ILTP+GK L +
Sbjct: 55 AILASRGVLQAEGSQVLEFLQGIVSNDVRPLLGAGPQQPPTYATILTPKGKFLHDVFLYP 114
Query: 60 IE--EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI 116
E ++++DR ++ + L YKLR + ++ V +W +
Sbjct: 115 HPELEGAVLMDVDREGLNAALQLLNRYKLRRPINFRDVSSEYCVAAAWGSNSPPPAGATS 174
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST------------ 164
T + Y LR G+ + + +
Sbjct: 175 ----GTTTTTTTTTATTTATTRVSEEEYRLLRYQLGVAEGEKEIPSAEAPFFLIALGPGS 230
Query: 165 -------------------------------------IFPHDALMDLLNGISLTKGCYIG 187
+ P D MD L+G+S TKGCY+G
Sbjct: 231 LPPRSRAAHSVDVMLHMNTNSIQIILGVSECGEPTCQVAPLDFNMDQLSGVSYTKGCYVG 290
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
QE S +R ++R+R M + + P G +L G
Sbjct: 291 QERNSFTHYRGVVRRRLMPVRL--EAPRLGDAVLEAGGSPG 329
>gi|119471895|ref|ZP_01614203.1| putative one-carbon metabolism transcriptional regulator
[Alteromonadales bacterium TW-7]
gi|119445268|gb|EAW26558.1| putative one-carbon metabolism transcriptional regulator
[Alteromonadales bacterium TW-7]
Length = 303
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 93/255 (36%), Gaps = 26/255 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ I + G + +L IT D+ L + + +GK+ F + ++
Sbjct: 6 ACPLSH-QLISLTGADKLSYLHGQITQDLNKLTNSNFLWTGHCSAKGKLWGVFKLFSHQD 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
++ SL++ L Y + + V I + L + T
Sbjct: 65 SYYLSGSSAEVEQSLVE-LKKYAVFAKVDISASSNRLIGLIGDDLSTVLTELGIAFDDNI 123
Query: 110 ----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPS 163
F N + + ++++ + + + + + + + I G ++D +
Sbjct: 124 IACDFDNGKALKLADNRVLLMVNSQFAIPDSVLTLDNDAPWQQAAILAGEPQLSSDAI-G 182
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--LPPSGSPIL 221
P + + GIS KGCY GQE V+R+++ ++ I++G + L +
Sbjct: 183 EYVPQMVNLQAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSESMLDEPELEVQ 242
Query: 222 TDD--IEIGTLGVVV 234
+ G L
Sbjct: 243 LGENWRRAGKLIAQS 257
>gi|53802555|ref|YP_112775.1| hypothetical protein MCA0240 [Methylococcus capsulatus str. Bath]
gi|53756316|gb|AAU90607.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 356
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 32/261 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ I+V G+ A FL +++T DV + + + ++ +G+I F + K
Sbjct: 48 ADLSHFGLIEVKGEDAGKFLGSMLTGDVRLVSETLGQFTSWCDGKGRIQATFWLFKRGGA 107
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFS 121
++L + + +I +L + LR+ I + + LS S+ + R
Sbjct: 108 YYLL-LPEALLPGVITRLKMFLLRTKATITDASGTLARIGLSGAGIADTLGSALPEPRGG 166
Query: 122 IADV------------LLHRTWGHNEKIASDIKT-------------YHELRINHGIVDP 156
V S + + L I GI
Sbjct: 167 TMSVGDCTLLALGCEPRPRWLAVGTSPAVSALWNKAAASARPAGAGAWALLDILAGIPYV 226
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT-DDLPP 215
T+ P ++ L G+S KGCY GQEV++R+ +R ++++ + ++P
Sbjct: 227 TTE-TAGEFIPQMLDLEALGGLSYKKGCYPGQEVIARLHYRGQLKRKVFLAHADCPEVPA 285
Query: 216 SGSPILTD--DIEIGTLGVVV 234
G+ + D +G +
Sbjct: 286 PGTRLHRPGFDESVGLVVSAA 306
>gi|325928378|ref|ZP_08189573.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118]
gi|325541254|gb|EGD12801.1| folate-binding protein YgfZ [Xanthomonas perforans 91-118]
Length = 273
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 16/260 (6%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 4 VRLAGTDAVAFAHAQFANDVQALAVGQWQWNAWLTAKGRVISIFALLREDDAHLLMLLPD 63
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-FSNSSFIDERFSI--ADVLLH 128
+ +L + R + I + EH + + +R + L
Sbjct: 64 GNAAEIAAQLGRFVFRRKLKISAAALLAYGGFVAPEHAHAAQADLGTQRIELDLGSAALP 123
Query: 129 RTW--------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
RT ++ S + + G+ + P +D L S+
Sbjct: 124 RTLLLYSPDALAMPIELPSAEAQWRTTDLQLGLARL-VESQREQWTPQQLALDRLQAYSV 182
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY GQE+V+R KR + + TD +G + D IGT+ V G ALA
Sbjct: 183 KKGCYPGQEIVARTHFLGKA-KRVLQLLETDAAVDAGDAVALDGSAIGTVVSVAGNLALA 241
Query: 241 IARIDKVDHAIKKGMALTVH 260
+ ++ + G AL
Sbjct: 242 VLPLELT---LDAGTALQAG 258
>gi|160871769|ref|ZP_02061901.1| glycine cleavage T protein [Rickettsiella grylli]
gi|159120568|gb|EDP45906.1| glycine cleavage T protein [Rickettsiella grylli]
Length = 304
Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 30/283 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+++ LS I+ G+ FLQ +T D+ + + +R A +G+I+ F + +
Sbjct: 9 NAIDLSELGLIRASGQDVTLFLQGQLTCDLEEINAEQSRLGAHCDAKGRIIAIFRLFFYQ 68
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNV----------IIEIQPINGVVLSWNQEHTFS 111
++ + L + L L Y L SNV I I L Q+ +F
Sbjct: 69 KNYYFLLPRTTLPLLLAS-LQKYALFSNVVLVDVSQDFQKIGIYGPTLKSLFEAQKLSFK 127
Query: 112 NSSFIDERF----------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+ ++ +L + H +I +H L I GI +
Sbjct: 128 ENEILELNHVLSVSIPGSVPRVVLLAPLHFIHVRFEQQNIHHWHLLDILAGIPTIYPE-T 186
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPI 220
PH + L + KGCYIGQE+++R + + R + G+ +
Sbjct: 187 SGQFTPHQLNLPELGAVCFHKGCYIGQEIIARTHYLGKSKSRLYRVRFNAQNSFLPGTLL 246
Query: 221 LTDDIEI--GTLGVVVGK-----KALAIARIDKVDHAIKKGMA 256
++ G L + + +AL + + H I+ G
Sbjct: 247 FDSAEKVEQGALMMSAEEDKNRYQALISLQTKAISHTIRLGCP 289
>gi|119478829|ref|XP_001259454.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181]
gi|119407608|gb|EAW17557.1| aminomethyl transferase, putative [Neosartorya fischeri NRRL 181]
Length = 375
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 64/284 (22%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISK----------IEEDTFILEIDRSKRD 75
++ D + +A L QG++L I ++ +++E+D+++
Sbjct: 2 LVANDPSRATRRTGTYTAFLNSQGRVLNDAFIYPMPKGDGETATTDDPAWLVEVDKNEVS 61
Query: 76 SLIDKLLFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSF------------------ 115
SL+ L +KLRS + + V SW +++
Sbjct: 62 SLLKHLKKHKLRSKLKLRALEDGERTVWSSWKDHSEPRWAAYNLESESSSPFSPSSSVAG 121
Query: 116 -IDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDFLPS 163
ID R L + ++ D+ TY R+ HGI + + +
Sbjct: 122 CIDTRAPGFGSRLVTPGEEDLRVHLPDEAQVAGSEVDLGTYTVRRMLHGIAEGQAEIIRE 181
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---------------- 207
+ P + MD++ G+ KGCY+GQE+ R H ++RKR + +
Sbjct: 182 SALPLECNMDMMRGVDFRKGCYVGQELTIRTHHTGVVRKRIVPVQLYAKSPLPSGETPVY 241
Query: 208 --TGTDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARID 245
T LPPSGS I G VG LA+ R++
Sbjct: 242 DPTAAVALPPSGSNISKVDGRKGRSAGKFLGGVGNIGLALCRLE 285
>gi|152995116|ref|YP_001339951.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
sp. MWYL1]
gi|150836040|gb|ABR70016.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
sp. MWYL1]
Length = 309
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 20/260 (7%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++V G A FLQ T D+ L AI +G+I+ F I + +D ++ +
Sbjct: 29 GVLRVSGLDAKKFLQGQTTCDINKLSQDSGLYGAICNIKGRIISSFYIVQNNDD-VLMVM 87
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------FIDERFSIA 123
R + + L Y + + + N V + + S F+ + +
Sbjct: 88 ARDLVEKTLLHLKKYAVFFKTELVDEQDNFTVYTKLAAKNIESDSNVSSNIFVTTQDNET 147
Query: 124 DVL--------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP-STIFPHDALMDL 174
L + + + A + + + P + TI P M
Sbjct: 148 ITLTVSNEPLKVQLLIAPSNQTAIEEENPELAALAVLAARPLINLEQSETILPQWLNMQS 207
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
GIS TKGCY GQE+V+R+Q++ +K+ + T +L + + + IG +
Sbjct: 208 TGGISFTKGCYTGQEIVARMQYKGKSKKQLTLATWQGNLDATKNIVDEQGKNIGQIFAAT 267
Query: 235 G----KKALAIARIDKVDHA 250
A I ID D
Sbjct: 268 HFQETNYAQVILNIDPSDAE 287
>gi|331005217|ref|ZP_08328610.1| Folate-dependent protein for Fe/S cluster synthesis [gamma
proteobacterium IMCC1989]
gi|330420960|gb|EGG95233.1| Folate-dependent protein for Fe/S cluster synthesis [gamma
proteobacterium IMCC1989]
Length = 327
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 55/286 (19%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK-----IARGSAILTPQGKILLYF 55
++ +L + V G A FLQ +T D+ L + A A T +G+++ F
Sbjct: 5 IAFCHLKQHKLLIVKGPDAKKFLQGQVTCDINALNQEKNTSVPAPLGAHCTHKGRVVFSF 64
Query: 56 LISKIEED----TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------ 105
++ + L I D L Y + S V I I + + N
Sbjct: 65 RAVELSPEIESQEIALSIPSDIVDIATAALKKYSVFSKVDINIDNDHYQLFGINGTNAKN 124
Query: 106 -------QEHTFSNS------------------------SFIDERFS--IADVLLHRTWG 132
EH + + +RFS IA +
Sbjct: 125 TLQALAVGEHIPEETNTACHTSAGTIICIAKECYELWLNAEQAKRFSTYIASEPMQNEVM 184
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVV 191
NE I D + + E++I +GI PH + N +S +KGCY GQEVV
Sbjct: 185 SNEGILDD-EYWDEVKIKNGIA-GIHANTSGVFTPHAINYHNMGNAVSFSKGCYTGQEVV 242
Query: 192 SRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVV 234
+R+Q+ ++++ + T +P +G + + ++G +V
Sbjct: 243 ARMQYLGNLKRQLYLFTSKTTIPTTISAGDSLYVANK-AQSVGDIV 287
>gi|325283646|ref|YP_004256187.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP]
gi|324315455|gb|ADY26570.1| folate-binding protein YgfZ [Deinococcus proteolyticus MRP]
Length = 309
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 46/294 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++V G + F+Q +T D+ P + L +G+I + I + +D L +
Sbjct: 11 GALRVTGADRLDFVQGQMTNDLRGCPTPGYVAACFLNVRGQIEHFARIYRRADD-IYLHL 69
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSSFID 117
D + +L ++L Y + V I+ + GV W Q + +++
Sbjct: 70 DAGQAPALAERLRRYVIFDQVEIQDLSADLRTLHLWGEWPAGVTEGWPQVAAAAGAAWTV 129
Query: 118 E------------RFSIADVLLHRTWGHNEKIASDIKT--------YHEL---RINHGIV 154
+ R + LH E + + + T + EL R+ G+
Sbjct: 130 QMGGAAVLLGAVNRSGQLGLDLHYLAAQEEAVMAALHTALPLNERSWAELQTARVAAGLP 189
Query: 155 DPNTDFLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+P D P + +D L IS KGCY+GQE+++R++ R R +
Sbjct: 190 EPALDGFLGH-LPQEVGLDTGGPLPAISYRKGCYVGQEIMARLEARGRARYGLGRLRVPA 248
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
GS +++ +G G+ G AL R+D + + AL V+G V
Sbjct: 249 GT-EVGSEVVSAGRAVGQTGLEAGGLALCRLRLD-----LPQDAALEVNGQAVT 296
>gi|289669030|ref|ZP_06490105.1| hypothetical protein XcampmN_11172 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 268
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 98/265 (36%), Gaps = 14/265 (5%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMVLPDGNAA 62
Query: 76 SLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ +L + R + I + + H + I+ A
Sbjct: 63 EIAVQLGRFVFRRKLKISTAALFAFGGFAAPEHAHAAHADIRTQRIELDLGSAAFPRTLL 122
Query: 131 WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ +A+ I+ + + G+ + P +D L S+ KGC
Sbjct: 123 LYAEDALAAPIEVPSVDAQWRHADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ +
Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLDTDSAVEAGDAVAMDGTTIGTVVSVAGTLALAVLPL 240
Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269
+ A + +G R +A P
Sbjct: 241 ELTLDA-DATLQAGAYGARPRAIMP 264
>gi|332532645|ref|ZP_08408521.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037861|gb|EGI74310.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Pseudoalteromonas haloplanktis
ANT/505]
Length = 303
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 101/255 (39%), Gaps = 26/255 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ I +CG + +L IT D+ L + + +GK+ F + +
Sbjct: 6 ACPLSH-QLISLCGADKLSYLHGQITQDLNKLTSSNYLWAGHCSAKGKLWGVFKLFSYQ- 63
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI----------QPINGVVL----SWNQEH 108
D++ L +++ + + +L Y + + V I ++ V+ S+ +
Sbjct: 64 DSYYLAGSQAEVEKSLAELKKYAVFAKVDITECSKRLIGLIGDDLSDVLAQLDISFEGDA 123
Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKTYHELRINHGIVDPNTDFLPS 163
F+N + + +++ + + +++ + + + + G + D +
Sbjct: 124 SACDFTNGKALKLADNRVLIMVDNQFSMPDNVSTLDNEAPWQQAAMLAGEPQLSADAI-G 182
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSP 219
P + + GIS KGCY GQE V+R+++ ++ I++G + P +
Sbjct: 183 EYVPQMVNLHAIGGISFKKGCYTGQETVARMKYLGKNKRAMYIVSGQSEGILSEPDLETQ 242
Query: 220 ILTDDIEIGTLGVVV 234
+ + G L
Sbjct: 243 LGENWRRAGKLIAQS 257
>gi|289665881|ref|ZP_06487462.1| hypothetical protein XcampvN_23092 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 268
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 98/265 (36%), Gaps = 14/265 (5%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ F A DV L + +A LT +G+++ F + + ++ ++ +
Sbjct: 3 GADAVAFAHAQFANDVQALAIGQWQWNAWLTAKGRVIAIFALLREDDAHLLMVLPDGNAA 62
Query: 76 SLIDKLLFYKLRSNVIIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ +L + R + I + + H + I+ A
Sbjct: 63 EIAVQLGRFVFRRKLKITTAALFAFGGFAAPEHAHAAHADIRTQRIELDLGSAAFPRTLL 122
Query: 131 WGHNEKIASDIK------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ +A+ I+ + + G+ + P +D L S+ KGC
Sbjct: 123 LYAEDALAAPIEVPSVDAQWRHADLQLGLARL-VEGQREQWTPQQLALDRLQAYSVKKGC 181
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARI 244
Y GQE+V+R KR + + TD +G + D IGT+ V G ALA+ +
Sbjct: 182 YPGQEIVARTHFLGKA-KRALQLLDTDSAVEAGDAVAMDGTTIGTVVSVAGTLALAVLPL 240
Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269
+ A + +G R +A P
Sbjct: 241 ELTLDA-DATLQAGAYGARPRAIMP 264
>gi|315127408|ref|YP_004069411.1| one-carbon metabolism transcriptional regulator [Pseudoalteromonas
sp. SM9913]
gi|315015922|gb|ADT69260.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas sp. SM9913]
Length = 303
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 97/268 (36%), Gaps = 52/268 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ I + G + +L IT D+ + + + +GK+ F + ++
Sbjct: 6 ACPLSH-QVISLSGTDKLSYLHGQITQDLNKINNNNFLWTGHCSAKGKLWGVFKLFSYQQ 64
Query: 63 DTFI----LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSW 104
+ ++ E++RS + L Y + + V I P + + +
Sbjct: 65 NYYLTGSSAEVERSLAE-----LKKYAVFAKVEINKAPERLIGLLGDGLTDLLTQLDIHF 119
Query: 105 NQEHTFSNSS--------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + T + + +D +F + D + + + + +
Sbjct: 120 SDDATACDFANGKALKLAPNRVLLMVDSQFCLPDEV---------STLDNDAMWQQASLL 170
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + D + P + +NGIS KGCY GQE V+R+++ ++ I+TG
Sbjct: 171 AGEPQLSVDAI-DEYVPQMVNLQAINGISFKKGCYTGQETVARMKYLGKNKRAMYIVTGQ 229
Query: 211 D----DLPPSGSPILTDDIEIGTLGVVV 234
D P + + + G L
Sbjct: 230 SEGLLDAPDIETQLGENWRRAGKLIAQS 257
>gi|312881728|ref|ZP_07741505.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370618|gb|EFP98093.1| predicted aminomethyltransferase-like GcvT [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 322
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 21/229 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L + I + G+ + +LQ +T DV++L A +GK+ F +
Sbjct: 21 LAITALDSWGAITLSGEQSKAYLQGQVTCDVVSLEQSNFTFGAHCDAKGKVWSAFRLFYH 80
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---SFID 117
+ + + + + + +L Y + S V +E + L + F +S D
Sbjct: 81 HSNLTMFQ-PKELIEIELSELKKYAIFSKVELEQSDDIALGLMGSLSTDFVDSITTERGD 139
Query: 118 ERFSIADVLLH----------------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
R + T E + + L I +
Sbjct: 140 VRSIGQGTAVRVDNQRWLLLLTQAAAMDTLNTTEATKVSEELWTLLEIKSASPLLTRE-Q 198
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
P + L+GIS TKGCY GQE V+R ++R ++ ++ G
Sbjct: 199 QLEHIPQALNLHALDGISFTKGCYTGQETVARAKYRGTNKRSLALLHGE 247
>gi|94986226|ref|YP_605590.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus
geothermalis DSM 11300]
gi|94556507|gb|ABF46421.1| glycine cleavage T protein (aminomethyl transferase) [Deinococcus
geothermalis DSM 11300]
Length = 298
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 107/283 (37%), Gaps = 37/283 (13%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G + F+Q +T D+ P A L +G+I + K E D + L +D
Sbjct: 10 LRLTGADRVDFVQGQMTNDLRGAPTPGMVACAFLNVRGQIEFFARAYKREGDVY-LHLDA 68
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNS----------------- 113
+ + L +L Y + V + ++ V W + +
Sbjct: 69 GQAEGLAARLRRYIIFDQVELQDLTAELRTVHVWGGQAVPGWNVGGGDAQVFELGSAAVL 128
Query: 114 SFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHELRINHGIVDPNTDFLPSTIF 166
+ R A + LH ++ + + R+ GI D D T
Sbjct: 129 AGRVNRTGEAGLDLHYLARAEAEVLAALGGEELPLAMLDLARVRAGIPDVTRDGFVGT-L 187
Query: 167 PHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
P + +D+ L+ IS KGCY+GQE+++R++ R R ++G + P + + +
Sbjct: 188 PQEVGLDVGGPLSAISYRKGCYVGQEIMARLEARGNARYHLARLSG--EALPDHAEVTRE 245
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G G+ G +LA R + G + V GV
Sbjct: 246 GRVVGQAGLCAGGLSLARLR-----KELVPGDTVEVGGVPATV 283
>gi|303286257|ref|XP_003062418.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455935|gb|EEH53237.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 363
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/349 (15%), Positives = 111/349 (31%), Gaps = 83/349 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKI 60
L+++ +++ G+ A+ LQ ++T DV L A +A+ G++ + +
Sbjct: 8 GAALASRRVLRIGGEDALSLLQRVVTNDVRPLASPGAAPVYAALQNAHGRLEHDVFLHRE 67
Query: 61 -------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
+ ++ D+ + L+ +LR+ V ++ + V+ +
Sbjct: 68 MMSAAGGVSGALLADLPSDGFDAALALLMKLRLRAAVTLDDVGDDHAVVVAAADDDGEEG 127
Query: 114 S-------------FIDERFSIADVLLHRTWGHNEKIASDIK------------------ 142
+D R+ +
Sbjct: 128 GRGTSVLPARFQFLPVDPRWVGLGRRGVLPAAAVAALLGSASPCGRGGSGGSDGGDASTS 187
Query: 143 ------------------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
Y R G+ + + +T P + ++ L+G+S KGC
Sbjct: 188 TSESESRSIDPFDGGGDAAYRRHRYLRGVAEGTAEL--ATRLPLECNLEGLHGVSFDKGC 245
Query: 185 YIGQEVVSRIQHRNIIRKRPMI------------------ITGTDDLPPSGSPILTDDIE 226
YIGQE+ +R ++RKR + + PSGS
Sbjct: 246 YIGQELTARTHFVGVVRKRLAPIAFRSAEDAAAALASGGTVHSSAAAGPSGSKRERGG-- 303
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG---VRVKASFPHWY 272
+G + V G LA+ R+ + + + G + AS P W+
Sbjct: 304 VGKVVAVEGDVGLAMMRVAAIGSDARMWATVDGGGEVEIETPASAPSWW 352
>gi|88703563|ref|ZP_01101279.1| aminomethyltransferase [Congregibacter litoralis KT71]
gi|88702277|gb|EAQ99380.1| aminomethyltransferase [Congregibacter litoralis KT71]
Length = 337
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +L ++ + + G FLQ +T D L + A A+ +G++L + + +
Sbjct: 23 ACFLPGEAMLHLRGSKVPEFLQGQLTCDTRKLGPERALMGALCNVKGRVLSDLTVLYVSD 82
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
IL + RS ++ L Y S + +E+ +L + + +R
Sbjct: 83 AHLILRLRRSVAATIAKTLERYAQFSRISVELAAEEHSILGLGGRDFAAECAIDGDRSDA 142
Query: 123 AD-------------------VLLHRTWGHNEKIASDIKTYHELRIN------HGIVDPN 157
AD +LL R GH E IA D L VDP
Sbjct: 143 ADSASNTVSPGSLPVTLRDDALLLQRGPGHGEVIAIDDAPARALASQGTASGSQADVDPV 202
Query: 158 TDFLPSTI---------------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T + +T+ P DL ++ KGCY GQE+V+R+ ++ +K
Sbjct: 203 TSWEAATLRTGHYALELEDLECFTPQALNYDLSGLVAFDKGCYTGQEIVARLHYKGRSKK 262
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
R I G + L PI D G G +VG
Sbjct: 263 RLQIFEGPETL----GPIARDTSLQGESGEIVGS 292
>gi|182412329|ref|YP_001817395.1| folate-binding protein YgfZ [Opitutus terrae PB90-1]
gi|177839543|gb|ACB73795.1| folate-binding protein YgfZ [Opitutus terrae PB90-1]
Length = 277
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 20/241 (8%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A FLQ T D+ + L + ++L + + ED F + +
Sbjct: 1 MSGPDAFTFLQGQFTNDLRAIAAGP-VYGLWLNQKARVLADSFVFRTAEDEFWVGSYFAA 59
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLL---H 128
++ ++L Y + +V +E + + V L+ + N S + RF A
Sbjct: 60 ARTISERLEAYIIADDVTVEDRTASWVGLTVSGSEVGENVSRTLRERRFEFAGRRGIDQA 119
Query: 129 RTW------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
R W + + R+ I TD P P++ ++ +
Sbjct: 120 REWFLPIEEAERVNERLGGAVELNAAEMERRRVGARIPAVPTDIGPGE-LPNEGGLEAV- 177
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
IS TKGCY+GQEV++R++ +R+R ++ GTD +P +P+ + ++G L +
Sbjct: 178 AISYTKGCYLGQEVIARLRSMGQVRRRLFLVRGTDAMPARPAPLFQGERQLGELRSAIAN 237
Query: 237 K 237
+
Sbjct: 238 E 238
>gi|149197871|ref|ZP_01874920.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155]
gi|149139092|gb|EDM27496.1| hypothetical protein LNTAR_05271 [Lentisphaera araneosa HTCC2155]
Length = 554
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S L ++V G+ A LQ T+DV L K A+ S++L PQGKI+ + + K++
Sbjct: 15 SFYELKTFGVLRVSGEDADKVLQGQSTSDVKVLGAKTAQLSSLLNPQGKIISHHFLIKLD 74
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI------------QPINGVVLSWNQEHT 109
E F L +S D + D L + + + +EI P + ++ + N
Sbjct: 75 EACFYLLCSKSVIDEVKDHLEKHIIMEDADLEICKSFKTFHLKNTDPSSELISNMNIHQI 134
Query: 110 FSNSSFIDERFSI---------ADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTD 159
++ ++ + + +L+ + + + D +T+ R+ G + D
Sbjct: 135 EPEKLYVHDQHLLLTMGMLGLDSSILITKDGSQPDLGLEMDDETFKAFRMEAGFPIMDHD 194
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPS 216
+ T+ P L L+ +S TKGC+ GQE+V+R+++R + + + + DL +
Sbjct: 195 YDQKTLLPETGL--QLHCVSYTKGCFTGQEIVARVKYRGNVNRYLSALIANEVPNDLQQN 252
Query: 217 GSPILTDDIEIGTLGVV 233
+ D +IG
Sbjct: 253 DTLSTIDGNKIGKYKSQ 269
>gi|226356920|ref|YP_002786660.1| aminomethyltransferase [Deinococcus deserti VCD115]
gi|226318910|gb|ACO46906.1| putative aminomethyltransferase [Deinococcus deserti VCD115]
Length = 309
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 37/292 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+L + S ++ G + F+ +T D+ P A L +G+I + + E+D
Sbjct: 22 TFLPSSSL-RITGADRVDFVHGQMTGDLRGAPTPGLVPCAFLNVRGQIEQFARAYRREQD 80
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQE-----HTFSNSSFID 117
L +D + L +L Y + V +E + V W+Q + +D
Sbjct: 81 -IYLHLDAGQAPGLAARLKRYIIFDQVEVEDVTDTLRTVHVWDQAVPGWLTDGPAAQSLD 139
Query: 118 -----------ERFSIADVLLHRTWGHNEKI-------ASDIKTYHELRINHGIVDPNTD 159
R + V LH E + + + R+ GI D D
Sbjct: 140 LGGAVTLAGRVNRSGTSGVDLHYLARQEEDVLNALGGQEAPLDELETARVRAGIPDIVRD 199
Query: 160 FLPSTIFPHDALMDL---LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ P + +DL L IS KGCY+GQE+++R++ R R ++GTD P
Sbjct: 200 GFTG-VLPQEVGLDLGGPLPAISYRKGCYVGQEIMARLEARGNTRYHLARLSGTD--LPD 256
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ + + +G G G +LA R + +G + V G
Sbjct: 257 HAEVTAEGKVVGQSGHFAGGLSLARLR-----KELPEGAQVQVGGHLATVQL 303
>gi|194383620|dbj|BAG64781.1| unnamed protein product [Homo sapiens]
Length = 163
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ R +E A D+ YH+ R G+ + D P P ++ + +NG+
Sbjct: 1 MGWRLLTQDEGPALVPGSRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGV 60
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----SPILTDDIEIGTLGVV 233
S TKGCYIGQE+ +R H +IRKR + D LP SG + + +G
Sbjct: 61 SFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAG 120
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G LA+ +K+ + + V + AS P W+
Sbjct: 121 QGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 158
>gi|300859136|ref|YP_003784119.1| hypothetical protein cpfrc_01719 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686590|gb|ADK29512.1| hypothetical protein cpfrc_01719 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206830|gb|ADL11172.1| tRNA-modifying protein ygfZ [Corynebacterium pseudotuberculosis
C231]
gi|308277082|gb|ADO26981.1| Glycine cleavage system T protein [Corynebacterium
pseudotuberculosis I19]
Length = 376
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 28/295 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA---DV-LTLPYKIARGSAI-LTPQGKILL--YF 55
+ LS++ IKV G A FL +++ DV L K SA+ L QG+IL
Sbjct: 59 LIDLSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDI 118
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--- 112
L ++ ED L + R++ ++ L S V +E + + L F
Sbjct: 119 LAAQDAEDALYLHLPRAQYETFFAFLTRMIFWSQVKVEPADLAVLTLMGAGVPHFPLPSS 178
Query: 113 ----SSFIDERFS--IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNT 158
++ F+ D+L+HR+ I + + + R+ +
Sbjct: 179 DAVVAAAQVPGFTTHRLDILVHRSEIMNTAKDLTLAGAIPTGLMAFTAERVRSQQPVVSL 238
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--- 215
D PH+A + N + L KGCY GQE V+R+++ + +I P
Sbjct: 239 DL-DHKSIPHEAPQLIANAVHLNKGCYRGQETVARVENLGRPPRALVIALLDGSAPTTPK 297
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
G PI++ +G LG VV L + + + K L V A P
Sbjct: 298 PGDPIVSGGRSVGKLGTVVQDYELGPIALAMIKQSALKATNLVVADNVALAIDPD 352
>gi|332812159|ref|XP_003308851.1| PREDICTED: putative transferase CAF17, mitochondrial isoform 1 [Pan
troglodytes]
gi|119590268|gb|EAW69862.1| chromosome 1 open reading frame 69 [Homo sapiens]
Length = 163
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 126 LLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ R +E A D+ YH+ R G+ + D P P ++ + +NG+
Sbjct: 1 MGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGV 60
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-----SPILTDDIEIGTLGVV 233
S TKGCYIGQE+ +R H +IRKR + D LP SG + + +G
Sbjct: 61 SFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAG 120
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
G LA+ +K+ + + V + AS P W+
Sbjct: 121 QGNVGLALLWSEKIKGPLHIRASEGAQ-VALAASVPDWW 158
>gi|262371763|ref|ZP_06065042.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311788|gb|EEY92873.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 240
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 30/233 (12%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A FLQ +T V L +R +AI +G+I I K+ ++F L
Sbjct: 10 SLNGVDAQKFLQGQVTIHVERLALNESRYTAICDLKGRIHFGLWIKKLNTESFELVTTHD 69
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
+ + + + S + +E I V + +H
Sbjct: 70 QAEEFAKHIKKFGAFSKMKLE--EIGSVFPT-----------------------IHGIQT 104
Query: 133 HNEKIASDIKTYHELRINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
+DI T+ I G + T+ L P + + +G+ KGCY+GQE+
Sbjct: 105 EFSSNETDIYTWQIEAIKSGQAWISKTTEHLFQ---PQELRLHQRDGVHFDKGCYLGQEI 161
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
V+R+ + + +I DLP + + D + ++ + G AL IA+
Sbjct: 162 VARLWFKAKPKHWLHLIHAKGDLPAPATQLNKDVEVVNSVNINDGYLALVIAK 214
>gi|53130544|emb|CAG31601.1| hypothetical protein RCJMB04_8k1 [Gallus gallus]
Length = 165
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+++ YH R GI + D P P ++ + +NG+S TKGCYIGQE+ +R H
Sbjct: 23 ENVQDYHRHRYKQGIPEGVKDLPPGVALPLESNLAYMNGVSFTKGCYIGQELTARTHHMG 82
Query: 199 IIRKRPMIITGTDDLP----PSGSPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
+IRKR + + + LP P G+ ILT+ G + +A+ R+ V+ +
Sbjct: 83 VIRKRLVPVQFSVPLPQESIPEGAEILTESGKAAGKFRAGGDELGIALLRLANVNEPLCL 142
Query: 254 GMALTVHGVRVKASFPHWY 272
+A V++ AS P W+
Sbjct: 143 NVA--GDKVKLTASIPEWW 159
>gi|88858214|ref|ZP_01132856.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas tunicata D2]
gi|88819831|gb|EAR29644.1| putative one-carbon metabolism transcriptional regulator
[Pseudoalteromonas tunicata D2]
Length = 304
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 27/270 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ I+ G +L IT D+ + ++ + + +GK+ + +
Sbjct: 6 ACSLSD-QLIEFAGADKKSYLHGQITQDINLINHETMLWAGHCSGKGKLWAVHKLFAHND 64
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF------- 115
F + + + +L Y + + V I ++ + + ++
Sbjct: 65 SYFSI-TSADSFEQSLAELKKYAVFAKVTISHNTEFKLIGLFGDNLQPALAALNINFQGN 123
Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIK-TYHELRINHGIVDPNTDFLP 162
D+R + ++ ++ I D T+ L I HG NT +
Sbjct: 124 SAAFQFGHAIKLSDDRIILIVKDTPESFLNDIAIWLDNDFTWQSLAILHGEPSLNTSAV- 182
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
P + + GIS TKGCY GQE V+R+++ ++ II D P + +
Sbjct: 183 GEYVPQMVNLQAIGGISFTKGCYTGQETVARMKYLGKNKRAMYIIQAQGDSPINSDEV-- 240
Query: 223 DDIEIGTLGVVVGK-KALAIARIDKVDHAI 251
+ ++G G A A IDK A+
Sbjct: 241 -EQQLGENWRRAGHIIASAFDPIDKKAVAL 269
>gi|299136495|ref|ZP_07029678.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8]
gi|298601010|gb|EFI57165.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX8]
Length = 317
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 109/298 (36%), Gaps = 43/298 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L +++F+++ G A +L ++T + +L + +L QG+I I + + D
Sbjct: 19 APLDDRAFLRITGPDATRWLNGMVTNSIQSLAPGEGNYNFLLNAQGRIQGDGTIYR-DGD 77
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEHT------------ 109
F+LE S+ +S+ L + + +V + G++L +
Sbjct: 78 EFLLETSTSQVESIQQHLDRFIIMDDVELSPAYTEKQGLLLIGAKAPAILAASELPALDP 137
Query: 110 -----------FSNSSFIDERFSIAD-----VLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ ++ R+ + D LL + + + +LR+
Sbjct: 138 LHLSHAKSLLLLAPAAGSIPRYELWDDPASIALLRENLSNAGAVEVSSASLEQLRLIEAT 197
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D P + + + KGCY+GQE+V RI+ R + + DL
Sbjct: 198 PLFSQDIRDRD-LPQET--AQAHALHFNKGCYLGQEIVERIRSRGQVHRTFTAFRLIGDL 254
Query: 214 PPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT-VHGVRV 264
P +PI + +G L G LA+ I + A+ LT G +
Sbjct: 255 PTLPAPIEANGKPVGELTSAALVPLPEGPTLLALGYIRR--EALDTHQPLTYAGGTAI 310
>gi|330973020|gb|EGH73086.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 293
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F I E D +L + ++
Sbjct: 2 DASKFLQGQLTCNLNYLNEDTSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMAGELIEAQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q + ++S + S +
Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQQTDSVVRANDLMAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R + AD + R H + + ++R+ G V +T P
Sbjct: 121 PGRAELWVRSAEADSIKSRLASHLNEAPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFSPVHASAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D + +G AL + +
Sbjct: 238 GNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285
>gi|262377511|ref|ZP_06070733.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262307567|gb|EEY88708.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 241
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 97/242 (40%), Gaps = 28/242 (11%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G A FLQ +T + TL R +AI + +G+I + KI ++F +
Sbjct: 7 FTLFSLNGVDAQKFLQGQVTLNTETLAENQTRYTAICSLKGRIQFGLWLKKISPESFEIV 66
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ L + + + S + +E+ + V N HT F+
Sbjct: 67 STEDQATELTNHIKKFGAFSKMKLEL--VGPVYPVINGIHTD----FV------------ 108
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIG 187
+D+ + + I G +T+F P + + GI KGCY+G
Sbjct: 109 -------ATETDVTMWEQQAIESG--QAWIQAATATLFQPQELRLHQREGIHYDKGCYLG 159
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKV 247
QEV++R+ + + ++ GT P + + D + ++ + G KAL +A+ + +
Sbjct: 160 QEVIARLWFKAKPKHWLHLVQGTGAAPDVATKLNNDVEIVNSIAIENGYKALVVAKPEAL 219
Query: 248 DH 249
Sbjct: 220 AE 221
>gi|330981456|gb|EGH79559.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 293
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 107/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F I E D +L + ++
Sbjct: 2 DASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMAGELIEAQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q + ++S + S +
Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRANDLIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R + AD + R + + ++R+ G V +T P
Sbjct: 121 PGRAELWVRSAQADSIKSRLAAQLSEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T +++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSDEEIPQPGTALFSPVHASAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D + +G AL + +
Sbjct: 238 GNVVMAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285
>gi|330964532|gb|EGH64792.1| hypothetical protein PSYAC_07740 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 293
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F + E D +L + +
Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q +G ++S + + +
Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWVRFGLQDGDGALVSLGLDLPQETGTVVRANELIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R AD L R + + ++R+ G V +T P
Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D ++ +G AL + +
Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHIGSPEGAALQMSELPYTL 285
>gi|302188267|ref|ZP_07264940.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae pv. syringae 642]
Length = 293
Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats.
Identities = 52/288 (18%), Positives = 106/288 (36%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + + A T +G++ F I E D +L + ++
Sbjct: 2 DASKFLQGQLTCNLNYLNEETSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEAQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q + ++S + S +
Sbjct: 61 LLDLRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRADDLIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R A + R + + ++R+ G V +T P
Sbjct: 121 PGRTELWVRSGQAGSIKSRLAAQLSEAPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTAVFSPVHASAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D + +G AL + +
Sbjct: 238 GNVVMAAQDGQHIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 285
>gi|219117237|ref|XP_002179413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409304|gb|EEC49236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 657
Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 95/276 (34%), Gaps = 75/276 (27%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLT------------------------------LPY-- 36
+ + V G+ A FLQ ++T D+ + LP
Sbjct: 34 RRILSVSGQGATTFLQGLVTCDLQSPPAPPRPEPIDHPQPGVPKSMKMDATGTTELPEVE 93
Query: 37 --KIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL-RSNVIIE 93
R + L +G+I+ L+ K +E + +++ + DSL+ L +KL RS V I
Sbjct: 94 FTDRLRAACFLDHKGRIVTDSLLWKTDESQYFIDVPGATADSLLQHLHAFKLRRSKVTIA 153
Query: 94 IQPIN---GVVLSWNQEHTFSNS--SFIDERFSIADVLLHRTWGHNEKIASDIKT----- 143
+ ++ V+ S +D R + + + + + T
Sbjct: 154 DRTLDMSSHVIFGTLNAGGSPPGYLSGVDPRHPSLGMRVLQLPSESSSNGENTSTLNEQD 213
Query: 144 ---------------------------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
Y +R G+ + + L + + L
Sbjct: 214 SDNLSLSTRHEAFAKLVSKVFPTSPGNYELVRRLAGVAEGSE--LTGK-IALETNQEHLQ 270
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+S KGCY+GQE+ +R+ H +RKR + + D
Sbjct: 271 AVSFHKGCYLGQELTARVHHTGAVRKRILPLLLLDP 306
>gi|302036423|ref|YP_003796745.1| putative aminomethyltransferase [Candidatus Nitrospira defluvii]
gi|300604487|emb|CBK40819.1| putative Aminomethyltransferase [Candidatus Nitrospira defluvii]
Length = 363
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 46/272 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS++ I+V G I +LQ+II+ D+L L R S+ LT +GK+L YF + + D
Sbjct: 48 LSHRGKIRVTGDDRIKWLQSIISNDILPLQPGQGRYSSFLTHKGKMLGYFRVY-VSADAV 106
Query: 66 ILEIDRSKRDSLIDKLLFYKL---RSN-----------VIIEIQPINGVVLSWNQE---- 107
+E D+ L + L ++ ++ + V ++ E
Sbjct: 107 WVEDVGEVGDATFQALRKFLLYGTKAKMENCGESWGLLLVSGPKSAEAVAAAFGIEVRAL 166
Query: 108 -------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144
T + R + + +
Sbjct: 167 QLLHTLPATIDGQQALILRTEETGEQDFEVLLPADAVPAAWNQLMTSGAPFGIKPVGTQA 226
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G+ D I P +A ++ SL+KGCY GQEVV+R+ +R+
Sbjct: 227 RELLRIEAGLPKAGPDL-NEEIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGNVRRH 284
Query: 204 PM-IITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ +I +PP+GS + + D E+G + V
Sbjct: 285 LVGLIIQDKAVPPAGSKLFSGDREVGWVSSAV 316
>gi|50083936|ref|YP_045446.1| hypothetical protein ACIAD0714 [Acinetobacter sp. ADP1]
gi|49529912|emb|CAG67624.1| conserved hypothetical protein; putative Glycine cleavage T protein
(aminomethyl transferase) [Acinetobacter sp. ADP1]
Length = 240
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 102/263 (38%), Gaps = 34/263 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M+ + ++ + I G A FLQ + + L R + I +G+I I+K+
Sbjct: 1 MNDLAFTSFTLI---GVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKL 57
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ F + + + + + Y S + +E ++ Q FSNS
Sbjct: 58 NPEEFQIVTTQDQAEDFALHIKKYGAFSKMKLEKTGTVYPTVTGIQTE-FSNS------- 109
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+DI + I G + P + + +G+
Sbjct: 110 -----------------ETDINAWQLQAIESGQA-WISKLTEHEFQPQELRLHQRDGVDY 151
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
KGCY+GQE+V+R+ + + ++ G ++P S + + D + ++ + G KAL
Sbjct: 152 DKGCYLGQEIVARLWFKAKPKHWLHLVLGDGEVPVSATKLNNDVEVVNSIAIASGYKALV 211
Query: 241 IARIDKVDHAIKKGMALTVHGVR 263
IA+ ++ ++LTV +
Sbjct: 212 IAKPAALEE-----LSLTVLDLP 229
>gi|331015591|gb|EGH95647.1| hypothetical protein PLA106_06430 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 293
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F + E D +L + +
Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q +G ++ + + +
Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQDGDGALVGLGLDLPQDTGTVVRANELIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R AD L R + + ++R+ G V +T P
Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D ++ +G AL ++ +
Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPYTL 285
>gi|109899465|ref|YP_662720.1| glycine cleavage T protein (aminomethyl transferase)
[Pseudoalteromonas atlantica T6c]
gi|109701746|gb|ABG41666.1| glycine cleavage T protein (aminomethyl transferase)
[Pseudoalteromonas atlantica T6c]
Length = 319
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 34/263 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + + + G+ I +LQ +TAD+ L A + +GK F + D
Sbjct: 17 CRLDDLHVLNISGEERIKYLQGQVTADMTKLSAHEALFGSHCDFKGKTWNIFYALEHN-D 75
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------------- 107
+ + + + + +L Y + + V +P +
Sbjct: 76 SVLFVSHKESAAASLPELKKYGVFAKVDFVDEPTQWACFGGQGQQLEAVISQLFGSTPAE 135
Query: 108 --HTFSNSSFI-------DERFS--IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ SN++ + ++RF + H +D + L I G+ +
Sbjct: 136 HLQSLSNANGVVLALGSENKRFMLVLTPEGQAHLAAHETLTYADKTLWEVLDIKAGVAEL 195
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213
T + P + L+GIS +KGCY+GQEVV+R + ++ I+ + L
Sbjct: 196 RT-ATSNEFVPQMMNLQALDGISFSKGCYMGQEVVARTKFLGKNKRAAFILKADESVNLL 254
Query: 214 PPSGSPILTDD--IEIGTLGVVV 234
P I + + GT+
Sbjct: 255 PGDNLEIPVGENWRKGGTVLRSA 277
>gi|302331392|gb|ADL21586.1| Glycine cleavage T protein [Corynebacterium pseudotuberculosis
1002]
Length = 362
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 28/295 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA---DV-LTLPYKIARGSAI-LTPQGKILL--YF 55
+ LS++ IKV G A FL +++ DV L K SA+ L QG+IL
Sbjct: 45 LIDLSHRRVIKVHGPEAGAFLHNLLSQKLSDVPQRLAEKNTATSALDLDAQGRILHQVDI 104
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN--- 112
L ++ ED L + R++ ++ L S V +E + + L F
Sbjct: 105 LAAQDAEDALYLHLPRAQYETFFAFLTRMIFWSQVKVEPADLAVLTLMGAGVPHFPLPSS 164
Query: 113 ----SSFIDERFS--IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNT 158
++ F+ D+L+HR+ I + + + R+ +
Sbjct: 165 DAVVAAAQVPGFTTHRLDILVHRSEIMNTAKDLTLAGAIPTGLMAFTAERVRSQQPVVSL 224
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--- 215
D PH+A + N + L KGCY GQE V+R+++ + +I P
Sbjct: 225 DL-DHKSIPHEAPQLIANAVHLNKGCYRGQETVARVENLGRPPRALVIALLDGSAPTTPK 283
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
G PI++ +G LG VV L + + + K L V A P
Sbjct: 284 PGDPIVSGGRSVGKLGTVVQDYELGPIALAMIKQSALKATNLVVADNVALAIDPD 338
>gi|284105831|ref|ZP_06386235.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283830118|gb|EFC34384.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 364
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 54/306 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S++ + V G+ + +LQ+II+ D+L L S+ ++ +GKIL YF + ++EE
Sbjct: 46 ADVSHRGLLHVTGEDRVTWLQSIISNDLLPLQSGDWLYSSFMSHKGKILSYFRVYRLEES 105
Query: 64 TFILEI--DRSKRDSLIDKLLFYKLRSN---------------------------VIIE- 93
+ ++ + K L Y ++ V I
Sbjct: 106 LVVEDVGESGAVTYDTFRKFLLYGTKAKMKNGEDTWGIILVSGPKAPLLIRHALDVDISG 165
Query: 94 -------IQPING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDI 141
+NG +++ QE + + D R W E + A
Sbjct: 166 LKQGGFLTHDLNGQPALIATTQETGERDVELLMPN-EAMDQAWSRLWEAGEAVGLRAFGT 224
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LRI GI D I P +A ++ SL+KGCY GQEVV+R+ ++
Sbjct: 225 AARESLRIEAGIPKLGPDL-NERIVPPEANLEG-KAFSLSKGCYPGQEVVARMDTYGTVK 282
Query: 202 KRPMII---TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254
+R + + + +P + + ++D E+G + + K LA+A + G
Sbjct: 283 RRLVGLVIDSPEAPIPSPDAKVFSEDREVGWVSSAIHSPTLNKTLALAF--PLRDFTAPG 340
Query: 255 MALTVH 260
AL V
Sbjct: 341 TALDVD 346
>gi|37521041|ref|NP_924418.1| hypothetical protein glr1472 [Gloeobacter violaceus PCC 7421]
gi|35212037|dbj|BAC89413.1| glr1472 [Gloeobacter violaceus PCC 7421]
Length = 288
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 23/249 (9%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ +LS++ + V GK A +LQ ++T ++ TL A+LT QGK++ +F + +
Sbjct: 3 LEGYFLSDRELLSVRGKDAADYLQRVLTCNLKTLQPGKFIPGALLTGQGKLVAFFDLYQQ 62
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------------PINGVVLS 103
+ + L + ++L +L Y +V++E + P G
Sbjct: 63 ADGGYTLAVPSGCAEALAARLERYVFSEDVVLEPREAIVLELLSSAPPFEPIPEPGRYRD 122
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + S + + L R + + + RI G+ + +
Sbjct: 123 FALDGLPARLSTLAPGHYRLE--LVRMPSEFAPAPLEAERFEAWRIEQGLPAWDKEL-ND 179
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD 223
+ P + +D IS KGCY GQEV+SR + + + + L +G+ + +
Sbjct: 180 NLIPLNLGID--GAISHDKGCYTGQEVISRATFVGHPAQELVGLLAEEPL-EAGTELTLE 236
Query: 224 DIEIGTLGV 232
+G +
Sbjct: 237 GDYVGVVTS 245
>gi|71892042|ref|YP_277772.1| putative aminomethyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|118577991|sp|Q493E3|YGFZ_BLOPB RecName: Full=tRNA-modifying protein ygfZ
gi|71796148|gb|AAZ40899.1| putative aminomethyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 330
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 48/261 (18%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-- 58
++ + L + +++ G I L T D+ L +A P+GK++ +
Sbjct: 20 LTFISLEEWTLVRLHGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNLYVFHL 79
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------------IEI 94
K +E FI ++ K+ I+++ Y + SNV +
Sbjct: 80 KNQEMAFIERLNICKKQ--IEEMKKYMVFSNVTVIPDYNAILIGIAGTNARNHLSMFFSV 137
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHEL 147
P + Q+ T S ERF S+ D LL+ + ++ +D + + L
Sbjct: 138 LPNKTHTIIHTQDVTLLYLSSPSERFLLIINKKSVLDYLLNES--QSQIQFNDSRQWVSL 195
Query: 148 RINHG--IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+ G I++P P MD+L+GIS KGCYIGQE ++RI++R ++
Sbjct: 196 DMEAGYPIIEP---ITSELFIPQAVNMDILDGISFNKGCYIGQESIARIKYRGYNKQTLY 252
Query: 206 IITGTDD------LPPSGSPI 220
+ G D LP +G +
Sbjct: 253 RLNGVMDYKKNYNLPAAGDQV 273
>gi|255537081|ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549506|gb|EEF50994.1| aminomethyltransferase, putative [Ricinus communis]
Length = 258
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 47/236 (19%)
Query: 84 YKLRSNVIIE----------------------IQPINGVVLSWN-----------QEHTF 110
Y+LRS V IE + W Q
Sbjct: 8 YRLRSKVEIENVAGEFSCWQRFGGNLTETSKVADEPEAASVGWGSGVDRAARSSTQGDGH 67
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTI 165
F D R + ++ K Y RI +G+ + + +
Sbjct: 68 GWQWFKDPRLDCLGFRGIFPSNQTPPLVESDKETNEKNYQLWRIENGVAEGSIEIPKGEA 127
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGS 218
P + + LN IS KGCY+GQE+V+R HR +IRKR + + DD GS
Sbjct: 128 IPLEYNLACLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDSGTEVEEKVAPGS 187
Query: 219 PI--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ T ++G + +G + L + R+++ + ++V+ P W+
Sbjct: 188 EVIDTTSCKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQDDLKVETIRPKWW 243
>gi|302132822|ref|ZP_07258812.1| hypothetical protein PsyrptN_15597 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 293
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F + E D +L + +
Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S V +Q +G ++ + + +
Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQEGDGALVGLGLDLPQDTGTVVRANELIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R AD L R + + ++R+ G V +T P
Sbjct: 121 PARAELWVRAEQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TDDLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLRSDEIPAPGTALFSPVHGSAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D ++ +G AL ++ +
Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHLGSPEGAALHMNELPYTL 285
>gi|237798703|ref|ZP_04587164.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806136|ref|ZP_04592840.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021556|gb|EGI01613.1| hypothetical protein POR16_07692 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027249|gb|EGI07304.1| hypothetical protein POR16_36744 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 293
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 52/286 (18%), Positives = 107/286 (37%), Gaps = 39/286 (13%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F I + D +L + ++
Sbjct: 2 DAGKFLQGQLTCNLNYLNEDRSSLGARCTQKGRMQSSFRIV-FDGDGCLLAMASELIEAQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE------RFS 121
+ L Y + S V +Q +G ++S + + + R S
Sbjct: 61 LLDLRKYAVFSKSKLTDESSAWVRFGLQDGDGALVSLGLDLPQETDAVVRSQDMLAIRVS 120
Query: 122 IADVLLH---------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
A L R+ ++ + + ++ GI P +
Sbjct: 121 PARAELWVRAEQADDIRSRLASQLAEGPLNDWLLGQVRAGIGQ-VFGSTREEFIPQMINL 179
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTD--DIEIGT 229
+ G+S KGCY GQE+V+R+Q+ +++R +T D +P G+ + + +G
Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQGDQVPEPGTAVFSPVHASAVGN 239
Query: 230 LGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
+ + + LA+ + D ++ +G AL + + +
Sbjct: 240 VVIAAQAGQAVELLAVLQGDAAENGRIHLGSPEGAALQMSDLPYQL 285
>gi|320333227|ref|YP_004169938.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211]
gi|319754516|gb|ADV66273.1| folate-binding protein YgfZ [Deinococcus maricopensis DSM 21211]
Length = 287
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 97/280 (34%), Gaps = 34/280 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G + F+Q +T + P A L +G++ + K +D + L +
Sbjct: 10 LRLTGADRVDFVQGQMTNHLKAAPTPGMVPCAFLNVRGQVEFFARAYKRADDVY-LHLAE 68
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE------------ 118
+L +L Y + V + ++ G W + +
Sbjct: 69 GDAPALAARLRRYIIFDQVDVQDVTEQLGTAHVWPGAALPGWDAAGADVQSFELGGGTVL 128
Query: 119 -----RFSIADVLLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFP 167
R V +H H + + + R+ G+ D D + P
Sbjct: 129 AARVNRVGAVGVDVHYLRAHEAAVLAALGEEVPGAALERARLEAGVPDVPADEWRG-VLP 187
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+ +D IS KGCY+GQE+++R++ R R R +TG LP +
Sbjct: 188 QEVGLDF--AISYRKGCYVGQEIMARLEARGNTRYRLARLTGEG-LPAHADVTDAAGKVV 244
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G G G LA R + D G + V GV +
Sbjct: 245 GRTGASTGAVTLARLRKEFAD-----GADVQVGGVSARVE 279
>gi|196232959|ref|ZP_03131808.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428]
gi|196222937|gb|EDY17458.1| folate-binding protein YgfZ [Chthoniobacter flavus Ellin428]
Length = 307
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 15/224 (6%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+V S ++ + + G + +L +T+DV L + + + T +GK+ ++ +E
Sbjct: 17 AVDFSERAQLMLTGPDRVRYLNGQVTSDVRKLSPGQTQMACVTTAKGKLCAD-IVITAQE 75
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFI----- 116
D ++ + S R+ L+ +L Y + +V IE + ++ E T S + +
Sbjct: 76 DALYVDAEGSLREGLLARLERYIVADDVAIEDVSEKYALLHYLGAEPTISGAGKVASARR 135
Query: 117 ------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
D R + + R ++A D LRI GI + P +A
Sbjct: 136 LGRVGWDLRLPREEFVAARESLLAGRVAVDAALAETLRIEAGIPSWGREL-DENTLPPEA 194
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+D + I KGCYIGQEV+SR++ + ++ P
Sbjct: 195 GLDQTH-IDYHKGCYIGQEVISRLRSVGHVNRQLTGFIAEGAAP 237
>gi|319760397|ref|YP_004124335.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str.
BVAF]
gi|318039111|gb|ADV33661.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia vafer str.
BVAF]
Length = 331
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 41/278 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L N IK+ GK +IP+L T D+ L S+ QGK++ +
Sbjct: 20 LTLISLKNWILIKLTGKDSIPYLHNQFTCDIKNLNINKYTFSSHCNVQGKMITNMYVFYF 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------EIQP 96
+ + I+ L Y + S V I + P
Sbjct: 80 NKYELAFICPTNVYKKQIEILKKYSIFSKVNIIPDYNVTLLGVAGSNAKQYLSIFFKTLP 139
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSI---ADVLLHRTWGHNEKIAS---DIKTYHELRIN 150
+ +Q + ERF + + L + + +++ + + L I
Sbjct: 140 NQINTIVHHQGISVLYFHLPKERFLLIVHDNSLFYSLLKEAQFLSAQYNNHSQWISLDIE 199
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + FP A +DLL GIS KGCY+GQE+++RIQH + ++ +TGT
Sbjct: 200 SGYPYIDI-LTSEMFFPQAANIDLLGGISFNKGCYLGQELIARIQHYKLNKQSLHKLTGT 258
Query: 211 DD------LPPSGSPILTDD----IEIGTLGVVVGKKA 238
D +P SG+ ++ ++GT+ K
Sbjct: 259 IDTNKHNQIPISGNYLMQIQNKTYKKVGTVLQSCQIKG 296
>gi|119503977|ref|ZP_01626058.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2080]
gi|119459980|gb|EAW41074.1| predicted aminomethyltransferase [marine gamma proteobacterium
HTCC2080]
Length = 318
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 26/281 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+ ++ +++ G+ A FLQ TAD + A +G+++ F ++ +
Sbjct: 20 APLAQEALLRLEGQDACKFLQGQTTADFGQVNALDVIPGAFCDVKGRVIADFRALIVDPE 79
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSFIDERFS 121
T IL + S D L L Y + S + +P GV S H + + +
Sbjct: 80 TVILCVMESLADLLSGHLTKYLMFSKAELNRTPEPPWGVAGSEAHHHFDVDQKLTEGNRA 139
Query: 122 IADVLLHRTW-------------------GHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A +N+ I + L G T
Sbjct: 140 AAVAAGWLIPLGHQTSLLIPEDAKQVGINLNNKSIDEFESAWRALACLRGEAR-ITSSTT 198
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL- 221
P D DL +S KGCY GQE+++R+ R ++R + + G ++
Sbjct: 199 GKYLPQDLSYDLAGWVSFDKGCYTGQEIIARLHWRGTPKRRLYLGSAAVKQLSDGLKLVN 258
Query: 222 -TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
TD +G++ + ++ ++ + A G + +
Sbjct: 259 QTDARAVGSIVNTANYGSGSVILVEAAEGA--AGQDVNIDE 297
>gi|255537315|ref|XP_002509724.1| aminomethyltransferase, putative [Ricinus communis]
gi|223549623|gb|EEF51111.1| aminomethyltransferase, putative [Ricinus communis]
Length = 252
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 47/236 (19%)
Query: 84 YKLRSNVIIEI------------------------QPINGVVLSWNQEHTFSNSS----- 114
Y+LRS V IE + V + +S+
Sbjct: 8 YRLRSKVEIENVAGEFSCWQRFGGNLTETSKVVDESEADSVGWGSGVDRAARSSAQGDGH 67
Query: 115 ----FIDERFSIADVLLHRTWGHNEKI-----ASDIKTYHELRINHGIVDPNTDFLPSTI 165
F D R + ++ K Y RI +G+ + +T+
Sbjct: 68 GWQWFKDPRLDCLGFRGIFPSNQTPPLVEADTETNEKNYQLWRIENGVAEGSTEIPKGEA 127
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGS 218
P + + LN IS KGCY+GQE+V+R HR +IRKR +++ DD GS
Sbjct: 128 IPLEYNLASLNAISFDKGCYVGQELVARTHHRGVIRKRLLLLMFLDDSGTEVEEKVAPGS 187
Query: 219 PI--LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+ T ++G + +G + L + R+++ + + ++V+ P W+
Sbjct: 188 EVIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKWLGSLIIEGQDDLKVETIRPKWW 243
>gi|330889491|gb|EGH22152.1| glycine cleavage T-protein (aminomethyl transferase) [Pseudomonas
syringae pv. mori str. 301020]
Length = 293
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 39/283 (13%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F I E D +L + +
Sbjct: 2 DASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSNVIIEIQPIN----------------GVVLSWNQEHTFSNSSFIDERFS 121
+ L Y + S + + G+ L+ + + I R S
Sbjct: 61 LLDLRKYAVFSKSKLTDESAEWGRFGLQDGDSALVGLGLDLAQETDAVVRANELIAIRVS 120
Query: 122 IADVLLHRTWGHNEKIAS---------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
L G + + S + + +I GI P +
Sbjct: 121 PGRAELWVRAGQADSVKSQLASQLSEGPLNDWLLGQIRAGIGQ-VFGSTREEFIPQMINL 179
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEIGT 229
+ G+S KGCY GQE+V+R+Q+ +++R +T ++++P G+ + + +G
Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSSEEIPEPGTALFSPVHASAVGN 239
Query: 230 LGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVR 263
+ + + LA+ + D ++ +G AL + +
Sbjct: 240 VVIAAQSGQNVELLAVLQGDAAENGHINLGSPEGAALQMSDLP 282
>gi|304310532|ref|YP_003810130.1| Glycine cleavage T protein (aminomethyltransferase) [gamma
proteobacterium HdN1]
gi|301796265|emb|CBL44473.1| Glycine cleavage T protein (aminomethyltransferase) [gamma
proteobacterium HdN1]
Length = 374
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 84/283 (29%), Gaps = 62/283 (21%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--------- 58
+ F+++ G A FLQ +T D+ + R A T +G+I FL
Sbjct: 40 HWEFLRISGPDAASFLQGQVTCDIREIANGHLRLGAHCTAKGRIQASFLGFLDRTSTPAE 99
Query: 59 ------------------KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----- 95
+F++ + L Y + + V +
Sbjct: 100 TSKPEAPKTEPKEASEANPTSTTSFVMLLPPGMTAPTQQALAKYAMFAKVELSDASDAFQ 159
Query: 96 ------------------PINGVVLSWNQEHTFSNSSFIDERFSIADVL--------LHR 129
P+ Q S +D + ++ L
Sbjct: 160 ALMIGGRDAKSWCERVNLPVQETPYGLTQSSQSDKISLLDADLPLWLIITTPKRSKELQS 219
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
W +AS ++ + G + + P + D LN I+ KGCY GQE
Sbjct: 220 QWPTT-ALASGLEGWQRCLSELGQAHIHPN-TQDKFIPQELNYDQLNAINFKKGCYKGQE 277
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD--DIEIGTL 230
+++R+ + + R + P + D IG +
Sbjct: 278 IIARLHFKGTPKYRTYRFQWQSKVSPMIGEAVKDLHGETIGYI 320
>gi|320105946|ref|YP_004181536.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
gi|319924467|gb|ADV81542.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
Length = 322
Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats.
Identities = 61/287 (21%), Positives = 108/287 (37%), Gaps = 41/287 (14%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+I+V G + +L + T V L + L QG+I +I E D +L+
Sbjct: 24 GWIRVTGSDRVRWLNGMTTNSVQALAPGQGAYTFFLNAQGRIQGDAVIW-AEADHLLLQT 82
Query: 70 DRSKRDSLIDKLLFYKLRSNVII-EIQPINGV--VLSWNQEHTFSNSSFIDE-----RFS 121
++ + LI L + + +V + ++ V +L E +++ R S
Sbjct: 83 SPAQTEKLIALLDRFIIMDDVELADVSADQHVLQILGVRAEDFLNSAGLTPPPTELTRIS 142
Query: 122 IADVLLHRTWGH----NEKIASDIKTYHE--------------------LRINHGIVDPN 157
D + R G E I+S LR+ G
Sbjct: 143 HTDAQIARLPGAVVPRFEIISSSPTALDAISGQFLEEGLSPLADGALEMLRVLEGTPLFG 202
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
TD P + + KGCY+GQE+V RI+ R + + + D+P G
Sbjct: 203 TDIRDRD-LPQET--AQTRALHFNKGCYLGQEIVERIRSRGNVHRTFHAFLLSGDIPAPG 259
Query: 218 SPILTDDIEIGTLGVVV---GKKALAIARIDKVDHAIKKGMALTVHG 261
+P+ ++ +G + G + LA+ I + A+ + +ALT G
Sbjct: 260 TPLTAEEKPVGEFTSIATLPGGRTLALGYIRR--EALDRNLALTFPG 304
>gi|330877446|gb|EGH11595.1| hypothetical protein PSYMP_17900 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 293
Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 43/288 (14%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F + E D +L + +
Sbjct: 2 DAGKFLQGQLTCNLNYLDENTSSLGARCTQKGRMQSSFRLV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ L Y + S + +Q +G ++S + + +
Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWLRFGLQDGDGALVSLGLDLPQETGTVVRANELIAIRVS 120
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
R AD L R + + ++R+ G V +T P
Sbjct: 121 PARAELWVRADQADTLKARLASQLAEGPLNDWLLGQIRVGIGQVFGST---REEFIPQMI 177
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDLPPSGSPILTD--DIEI 227
+ + G+S KGCY GQE+V+R+Q+ +++R +T +D++P G+ + + +
Sbjct: 178 NLQAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLLSDEIPAPGTALFSPVHGSAV 237
Query: 228 GTLGVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
G + + + LA+ + D ++ +G AL + +
Sbjct: 238 GNVVIAAQAGQDVELLAVLQGDAAENGHIHIGSPEGAALQMSELPYTL 285
>gi|261856409|ref|YP_003263692.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2]
gi|261836878|gb|ACX96645.1| folate-binding protein YgfZ [Halothiobacillus neapolitanus c2]
Length = 344
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 64/312 (20%), Positives = 111/312 (35%), Gaps = 56/312 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G+ A FLQA++T ++L L A A+ +G+I LI +
Sbjct: 27 APLDTRTSLLVSGEEAGEFLQAMLTQEILLLDGTHAARGALCNAKGRISTTVLIHPLRPQ 86
Query: 64 ----------TFILEIDRSKRDSLIDKLLFYKLRSNVII---EIQPINGVV--------- 101
T+ L + L+ L Y LR V+I + GV+
Sbjct: 87 GREQGSEQSMTYRLTVPSELAADLLKTLKLYVLRRRVVINGNDDWQNIGVLNPDPAFLAD 146
Query: 102 --LSWNQEHTFSNSSFI------------DERFSIADVL-LHRTWGHNEKIASDIKTYHE 146
++ + + S+ D R S+ + T + + +
Sbjct: 147 LGIAASASDPLAQSTLPSGVIVTWEHMGDDARLSLQGPTSVLLTLAPHLPQRTSNSAWQC 206
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM- 205
IN GI + P +D LN +S KGCY GQEVV+R+ + +R +
Sbjct: 207 AEINDGIPTITQETALH-FVPQWLNLDQLNAVSFKKGCYPGQEVVARLHYLGKSNRRMIK 265
Query: 206 -------IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKG 254
+T + P+ SP + + VG + LA+ R++ +
Sbjct: 266 GSTRLTDPVTPRSVIYPANSPETEAGEIVRSAICRVGNENMQVFLAVIRLNHLHD----- 320
Query: 255 MALTVHGVRVKA 266
L + G
Sbjct: 321 -ELLIEGQPCTL 331
>gi|330957818|gb|EGH58078.1| hypothetical protein PMA4326_04469 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 293
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 87/249 (34%), Gaps = 33/249 (13%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A FLQ +T ++ L + A T +G++ F I E D +L + +
Sbjct: 2 DAGKFLQGQLTCNLNYLSESQSSLGARCTQKGRMQSSFRIV-FEGDGCLLAMASELIEPQ 60
Query: 78 IDKLLFYKLRSN----------VIIEIQPINGVVLSWNQE------HTFSNSSFIDERFS 121
+ L Y + S V +Q + ++ + + I R S
Sbjct: 61 LLDLRKYAVFSKSKLTDESAAWVRFGLQEGDDALVGLGLDLPQETGAVARADALIAIRVS 120
Query: 122 IADVLLHRTWGHNEKI---------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
A L G + + + +I GI P +
Sbjct: 121 PARAELWVPAGQADSTRSHLAARLAEGSLNDWLLGQIRAGIGQ-VFGSTREEFIPQMINL 179
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLG 231
+ G+S KGCY GQE+V+R+Q+ +++R +T ++P G+ + +
Sbjct: 180 QAVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLQAQEIPQPGTALFSP-----VHA 234
Query: 232 VVVGKKALA 240
VG LA
Sbjct: 235 SAVGNVVLA 243
>gi|218459788|ref|ZP_03499879.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli Kim 5]
Length = 131
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 67/115 (58%)
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+DF FPHD L+DL G+S KGCY+GQEVVSR+QHR R+R + ++ LP +
Sbjct: 3 GSDFALQDAFPHDVLLDLNGGLSFKKGCYVGQEVVSRMQHRGTARRRVVTVSAAAALPGT 62
Query: 217 GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHW 271
G+ I D +GTLG V G LAI R+D+ A+ +G L G V + P W
Sbjct: 63 GTEITAADKPVGTLGSVAGGSGLAIVRVDRAGAAMAEGTPLLAGGTPVALALPQW 117
>gi|332305550|ref|YP_004433401.1| folate-binding protein YgfZ [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172879|gb|AEE22133.1| folate-binding protein YgfZ [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 347
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 86/263 (32%), Gaps = 34/263 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + +KV G+ I +LQ +TAD+ +L +GK F + +E
Sbjct: 45 CRLDDLQILKVSGEERIKYLQGQVTADMTSLSSNEGLLGCHCDFKGKAWNIFYALEHDE- 103
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---------------- 107
+ + + +L Y + + V +
Sbjct: 104 SVLFVSHKEGAAKSTPELKKYGVFAKVEFSDDTTSWACFGGQGAQLEAVIKQLFADVPAK 163
Query: 108 --HTFSNS-----SFIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDP 156
T SN + + VL + H+E + + I GI
Sbjct: 164 DRQTLSNENGVVMALGSPQMRFMLVLTEQGQAALAAHDELQYAPGTLWEVQDIKAGIAQL 223
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PP 215
T + P + +N IS +KGCY+GQEVV+R + ++ ++ + +
Sbjct: 224 RT-ATSNEFVPQMMNLQAVNAISFSKGCYMGQEVVARTKFLGKNKRAAFVLKAEEAVDLE 282
Query: 216 SGS--PILTDD--IEIGTLGVVV 234
+G I D GT+
Sbjct: 283 AGDTLEIPVGDNWRRGGTVLRCA 305
>gi|305680339|ref|ZP_07403147.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
gi|305659870|gb|EFM49369.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
Length = 363
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 30/291 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K+
Sbjct: 49 ALVDRSHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKV- 107
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEH 108
+D F L+I +SL+D L S V I E+ + G
Sbjct: 108 KDAFYLDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFG 167
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
+ R ++ DV E + + Y R+ G+ + + D PH
Sbjct: 168 AWVRHDVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDL-DDKSIPH 224
Query: 169 DALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220
+ + + + L KGCY GQE V+R+++ + ++ LP G+PI
Sbjct: 225 EVPALINRGERIAAVHLDKGCYRGQETVARVENLGRPPRLLTLVHLDGSAPTLPTPGTPI 284
Query: 221 LTD-----DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ +G +G V+ + + A AL +
Sbjct: 285 VMGPATGRQRTVGRIGTVIHDHEFGPIALALLKRAALTSQALMAGESAILV 335
>gi|328949863|ref|YP_004367198.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
gi|328450187|gb|AEB11088.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
Length = 330
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 33/286 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + + + G + FL TA++ L + L +G++ L+ + E
Sbjct: 47 SERGVLALSGADRVDFLNGQCTANIKALTPGGVVEALFLNARGQVELFGTVYHRGE-ALW 105
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------IQPINGVVLSWNQEHTFSNSSFID 117
+ +L + Y + V +E + P G VL F++
Sbjct: 106 ITAPSGMSQALEARFRRYIIFDQVALEPFEAAQFRLVGPKAGEVLGRAGYALPEAGRFVE 165
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------RINHGIVDPNTDFL 161
+ + + + + L R+ GI D
Sbjct: 166 VKGGLL-ARDAHGYALVVPVEDAEAAWRALCAAGATPVGRGALEVWRVERGIPDLPEALG 224
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
P + ++ L + KGCY+GQE+++R++ R +R+R M + ++ PSG+ +
Sbjct: 225 R---LPQEVGLEDL--VHPGKGCYLGQEIMARLEARGNVRRRLMGLRL-GEVVPSGAEVT 278
Query: 222 TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ +G +G VV L + + A++ G + V GV + +
Sbjct: 279 HEGRAVGQVGTVVRSPRLGAVALAVLGKALEPGDRVEVGGVAAEVA 324
>gi|225022191|ref|ZP_03711383.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
gi|224945124|gb|EEG26333.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
Length = 335
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 30/291 (10%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V S+++ I+V G A FL +++ + +P + + L QG+IL Y ++K+
Sbjct: 21 ALVDRSHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKV- 79
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPINGVVLSWNQEH 108
+D F L+I +SL+D L S V I E+ + G
Sbjct: 80 KDAFYLDISAVDAESLVDYLRAMVFWSQVEITVTDLGILSIIGAEVPDVGGEFSRQLPFG 139
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
+ R ++ DV E + + Y R+ G+ + + D PH
Sbjct: 140 AWVRHDVFVPRGALVDVAKRIIEQGIEPMG--LMAYTAERVRAGLPERSLDL-DDKSIPH 196
Query: 169 DALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220
+ + + + L KGCY GQE V+R+++ + ++ LP G+PI
Sbjct: 197 EVPALINRGERIAAVHLDKGCYRGQETVARVENLGRPPRLLTLVHLDGSAPTLPTPGTPI 256
Query: 221 LTD-----DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ +G +G V+ + + A ALT +
Sbjct: 257 VMGPATGRQRTVGRIGTVIHDHEFGPIALALLKRAALTSQALTAGESAILV 307
>gi|291295136|ref|YP_003506534.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
gi|290470095|gb|ADD27514.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
Length = 325
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 42/294 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + SN +++ G FL T+++ + + L+ +G+I L+ +
Sbjct: 41 ALLDFSNHGLLELRGPDGTEFLHNQCTSNIRAMLPDSWLETLFLSARGQIEHLGLVFNLG 100
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS-SFIDERF 120
+ + +L ++ + + V IE P + + L + + + R+
Sbjct: 101 NSFW---VSSPSARALAERFRKFIVFDQVEIEALPWSLLRLHGPGAEAVAQQLTALPPRW 157
Query: 121 SIADVL----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ L + + +H R+ GI D
Sbjct: 158 GLVKTPHLVLARDEFGLWFLVPASQAYQLAQRLLEAGASPVGHQAWHIWRVERGIPDLPE 217
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
P +A ++ +S KGCY+GQE+++R++ R R + M + G +LP SG+
Sbjct: 218 ALGE---LPQEAGLE--GRVSYKKGCYLGQEIMARLEARGNTRYQLMGLLGQKELP-SGA 271
Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
I + +G +G V G ALA+ R + G + V G S
Sbjct: 272 EIFREGKRVGRVGTAVESPRLGAIALALLR-----KELAPGDQVHVEGWSATVS 320
>gi|322436415|ref|YP_004218627.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9]
gi|321164142|gb|ADW69847.1| folate-binding protein YgfZ [Acidobacterium sp. MP5ACTX9]
Length = 324
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 66/311 (21%), Positives = 114/311 (36%), Gaps = 49/311 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S ++N +IKV G +L ++T ++ L + +L+ QG+I
Sbjct: 11 SFAPITNLGWIKVTGSDRTRWLNGMVTNNITALTPGQGCYNFVLSNQGRIQADLTAFPT- 69
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------------- 93
ED +LE D ++ +L + + +V +E
Sbjct: 70 EDAILLETDLTRIPALTALFDRFIIMDDVELEDISPTRAGLTLIGPAALRPLLDLGLTPL 129
Query: 94 -IQPINGVVLSWNQEH-TFSNS-SFIDERF-----SIADVLLHRTWGHNEKIASDIKTYH 145
+ P+ ++WN TF ++ S + RF LL +
Sbjct: 130 ALLPLETSQITWNGAEVTFIHAHSPLIPRFELWSDPKTIALLTAALEAANIPQAAEDDLE 189
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G TD P + L + +KGCY+GQE+V RI R + +
Sbjct: 190 HLRLLEGTPLYGTDI-RDKELPQET--AQLRALHFSKGCYLGQEIVERINSRGAVHRTFA 246
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259
T DLPP+G+P+ D+ +G + G LA+ I + A+ + +T
Sbjct: 247 GFLLTGDLPPAGTPLTADEKPVGEITSAARIPLPTGDIQLALGYIRR--EALDRAATITY 304
Query: 260 -HGVRVKASFP 269
G + P
Sbjct: 305 PGGTAIAVKLP 315
>gi|285018598|ref|YP_003376309.1| glycine cleavage system t (aminomethyltransferase) protein
[Xanthomonas albilineans GPE PC73]
gi|283473816|emb|CBA16318.1| putative glycine cleavage system t (aminomethyltransferase) protein
[Xanthomonas albilineans]
Length = 288
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + ++ + G A+ F QA DV L + +A L +G+++ F + + +DT
Sbjct: 15 LPHLEYVALRGPDAVAFAQAQFANDVQALQVGQWQWNAWLNVKGRVIALFALLRQADDTL 74
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-----VLSWNQEHTFSNSSFIDERF 120
+ + L L + R + I + + + Q +
Sbjct: 75 LALLPDGGASELAAALGRFVFRRKLRIAAEDDLRAHGRLSLPAQAQGALSATGKDGAIEL 134
Query: 121 SIADVLLHRTW---GHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ L RT +A+D + + E + G+ D P +D
Sbjct: 135 DMGGDGLSRTLRLMPAQATLAADPGIVDAWREADLRLGLARLAPD-QHEQWTPQQLGLDR 193
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
L+ S+ KGCY GQE+V+R ++ ++ + +G+P+L + IG++ +
Sbjct: 194 LHAFSVKKGCYPGQEIVARTHFLGKAKRALQLLELEAPV-ATGAPVLREGEPIGSVISIA 252
Query: 235 GKKALAIARIDK 246
G ALA+ +++
Sbjct: 253 GTLALAVLPLEE 264
>gi|225631230|ref|ZP_03787922.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591076|gb|EEH12266.1| aminomethyl transferase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 182
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
MS + ++ I + G FLQ IIT D+ L + A S +L+PQGK L F + +
Sbjct: 1 MSYIPFLSRGVIVLYGPDTRDFLQGIITNDINKLDSQKAIYSLLLSPQGKYLYDFFLIEY 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSS---- 114
+ T +LE + +I+KL K LR + ++ + V + +N + +S
Sbjct: 61 GKYT-LLECENIHLQQIIEKLDLLKTYLRVKIK-DVSALYKVGVLFNTKLAECSSKSQVI 118
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
F D R + + + E + D Y ++RI + + D D + ++ FP L+D
Sbjct: 119 FQDPRHKLLGMRIIHKDEIKEPVG-DFTQYEKVRIQNLVPDGAKDMVQNSSFPLQFLVDK 177
Query: 175 LNGIS 179
+NGIS
Sbjct: 178 VNGIS 182
>gi|189220194|ref|YP_001940834.1| aminomethyltransferase [Methylacidiphilum infernorum V4]
gi|189187052|gb|ACD84237.1| Predicted aminomethyltransferase [Methylacidiphilum infernorum V4]
Length = 398
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 11/275 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS Q+ ++ G+ I +L + AD+ +LP A +A L +G++ I+ E
Sbjct: 125 CELSGQAIWRISGRDRIKYLNGQLPADIASLPPGCALQTAALNRKGRMDCELWIAHHPE- 183
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNS-SFIDERFS 121
++ + ++ +L + + V IE + + ++ + S F ++RF
Sbjct: 184 FLFVDCPKEIEEATEKRLTSFLVADKVTIEKLGGQFYLYHYFSPDPPKGFSFCFQNKRFG 243
Query: 122 IADVLLH--RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
I + R LR+ + I + +T +A + + IS
Sbjct: 244 IPGWDVWSERRLEDFGCPEVPPGVQESLRLENMIPRWGKELTSNT-LALEAFL-SKDSIS 301
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV---VVG- 235
TKGCY+GQE++SRI H I + ++ D+ P + G L G
Sbjct: 302 FTKGCYVGQEIISRIHHIGEINQLLTLLIALDESIPQLGQLYYQSRPAGRLTSSGYSYGY 361
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
KA+A+ I K + + + +++ + P
Sbjct: 362 NKAVALGYIRKEYRKEQGIVQIAGQSLKILKAPPP 396
>gi|227489453|ref|ZP_03919769.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090631|gb|EEI25943.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51867]
Length = 409
Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 34/283 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S V SN+ + V G FL T + + A + L G+I ++
Sbjct: 112 LSLVDRSNRVILSVTGDDREAFL----TNLLSKIIAPGATMALDLDANGRIQHEMDVAVT 167
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E++ F++ ++L D L+ S V I I P+ V + EHT +++F
Sbjct: 168 EDEVFLIVSPHE-AETLRDYLVAMIFWSKVEITISPLQLVTVF--GEHTPLDAAFAR--- 221
Query: 121 SIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPNTDFLPSTIFPH 168
+I L +G + A+ + ++ RI G D D PH
Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQNGQLAGLMSFEAYRIARGEPDHPVDC-DEKTIPH 280
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225
+ + L + L KGCY GQE V+R+++ + ++ LP +P+
Sbjct: 281 EVGLWLAEAVDLDKGCYRGQETVARVENLGRAPRALVVTLLDGSVPQLPAPQTPVTLAGR 340
Query: 226 EIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVH 260
+GTLG VV G ALA + + + + A++V
Sbjct: 341 TVGTLGSVVHHHELGPIALATIKASALQRSGEFMAGDCAMSVD 383
>gi|152988054|ref|YP_001350103.1| hypothetical protein PSPA7_4761 [Pseudomonas aeruginosa PA7]
gi|150963212|gb|ABR85237.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 314
Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 87/256 (33%), Gaps = 27/256 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L ++ + V G A FLQ +T ++ L + + T +G++L F I +
Sbjct: 8 TPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSSLGGRCTIKGRLLSSFRILLQGDG 67
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+ L D L Y + S + + V + + I+
Sbjct: 68 LLLALASELLEAQLAD-LKKYAVFSKATLADESAAWVRVGLRDAGEALRALGIEAPDEAG 126
Query: 124 DVLLHR-------------TWGHNEKI------------ASDIKTYHELRINHGIVDPNT 158
+ H W + + + + ++ GI
Sbjct: 127 GIARHADLLAVALGDARVELWIPAARAEAVLATLREHSREAPLDDWLLGQVRAGIGQ-VF 185
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
P + + G+S KGCY GQE+V+R+Q+ +++R + + PP +
Sbjct: 186 GATRELFIPQMINLQAVGGVSFKKGCYTGQEIVARMQYLGRLKRRLYRLALAGEDPPEPA 245
Query: 219 PILTDDIEIGTLGVVV 234
L + ++G VV
Sbjct: 246 TGLFSPVHATSVGEVV 261
>gi|164663221|ref|XP_001732732.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966]
gi|159106635|gb|EDP45518.1| hypothetical protein MGL_0507 [Malassezia globosa CBS 7966]
Length = 289
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 55/271 (20%)
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV-------LSWNQE 107
LI E + ++E+D+ LI + +KLRS I ++ V+ + +
Sbjct: 8 LIPYAREPSILVEVDKCISTDLIAFVKRFKLRSKFQINDVSDAWDVMQLYGNAQVDLDML 67
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNE-----KIASDIKTYHELRINHGIVDPNTDFLP 162
+ + +F D R + H E K A+D+ Y R+ G+ + + +
Sbjct: 68 NLYGAYAFRDVRSPEMGWRVLLPKKHTEQEIPLKNATDV-DYTIHRMLQGVPEGSKEIHM 126
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD----------- 211
+ P ++ +D ++G+ KGCYIGQE+ +R ++RKR M I+
Sbjct: 127 GSSLPLESCIDYMHGVDFRKGCYIGQELTARTFFTGLVRKRIMPISLDPNPCHHSSPAPI 186
Query: 212 --------DLPPSGSPIL--------------TDDIEIGTLGVVVGKKALAIARIDKVDH 249
LP SG+ + G + LA+ R+++VD
Sbjct: 187 NVDTSMNLALPDSGADVRFVMPQKSDVSTSQPGRSRSAGKFLSGIHNIGLALLRLEQVDK 246
Query: 250 AI--KKGMALTVHGVR------VKASFPHWY 272
+ + G V + A P W+
Sbjct: 247 SNSEEAGHPRLVLEAPDGSPLYLHAYRPSWW 277
>gi|307111245|gb|EFN59480.1| hypothetical protein CHLNCDRAFT_138089 [Chlorella variabilis]
Length = 712
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/323 (20%), Positives = 118/323 (36%), Gaps = 75/323 (23%)
Query: 25 AIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEED--TFILEIDRSKRDSLIDK 80
I+T DV L A + + IL QG+ L L+ + +++ T +++ D L+
Sbjct: 18 GIVTNDVTMLEPPGAPPQYACILNAQGRYLHDLLMHRTKDEVPTLLVDADSRGTPDLLRL 77
Query: 81 LLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSF--------IDERFSIADVL----- 126
L Y+LR V I+ + V ++ E ++ D R +
Sbjct: 78 LKRYRLRQKVDIDDVSQQYCVWALYSGEAPALQAALSSLPPGWAPDPRLDQLGLRAVLPA 137
Query: 127 ------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
G + + + RI HG+ + +++ + P + +D L GIS
Sbjct: 138 DAEGSGSGGGGGAGSLGSVSWRDHRRWRILHGVAEGDSEIPTGEVVPLEFNIDGLAGISF 197
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMII------TGTDDLP-------------------- 214
TKGCY+GQE+++R + ++RKR M +G +
Sbjct: 198 TKGCYVGQELMARTHFKGVVRKRLMPFVLAPPGSGDSGMAQQQQQQQQQAGIGAVPAAAL 257
Query: 215 ----------------PSGSPILTDD-----IEIGTLGVVVGKKALAIARIDKVDHAIKK 253
G+ + + +G + V G LA+ R+ V+ A
Sbjct: 258 AADAAAVAGSDQAIRVQPGAAVYWEQPGGRRKSVGVVRVADGALGLAVLRLAAVEAARAA 317
Query: 254 GMALTVHGVRVKAS----FPHWY 272
G +L V +A P+W+
Sbjct: 318 GQSLVVGESEARAELQPWRPNWW 340
>gi|294878109|ref|XP_002768268.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870504|gb|EER00986.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 283
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 36 YKIARGSAILTPQGKILLYFLISK----------------IEEDTFILEIDRSKRDSLID 79
+ A + L+P+G++L L+ E++ ++++D D+++
Sbjct: 2 EQSAAAAVFLSPKGRVLFDCLMYSGVSLKPDTSKGIVSDDKGEESLVVDVDEGVLDNVMR 61
Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERFSIADVLLHRTWGHN 134
+ +++ + IE GV + ++ + + D R + D+ L +
Sbjct: 62 LFIRHRVHLPLNIEKLDNLGVYWTPSKSQNGCDGDTEVPVYEDPR--VKDLGLRAILPKS 119
Query: 135 EKIASDIKT-YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ A + Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R
Sbjct: 120 DIDAESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTR 179
Query: 194 IQHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAI 251
+ +RKR + D+ SG+ I+ D +IG + + + + I ++
Sbjct: 180 ASKKLAVRKRLFGMRIDGDVDVESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP- 238
Query: 252 KKGMALTVHGVRVKASF 268
KGM + V+A+
Sbjct: 239 -KGMQMNTKQAMVEATK 254
>gi|218507752|ref|ZP_03505630.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli Brasil 5]
Length = 119
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +V+L ++S + V G A FLQ +IT D+ +L AR A+LTP GKIL F+I +
Sbjct: 9 MPAVFLKDRSLLSVGGADAQSFLQNLITTDIASLAADEARPGALLTPHGKILFDFMIWQ- 67
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+ D +++E D +RD+L+ +L YKLR+ V + G+ + W ++
Sbjct: 68 DGDGYMIETDAGQRDALLKRLTMYKLRAAVTLAPVAEEGINVCWGEDTD 116
>gi|326331984|ref|ZP_08198269.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
gi|325950122|gb|EGD42177.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
Length = 319
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 102/271 (37%), Gaps = 23/271 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ +++ G + +L ++ + L + IL+PQG + F +
Sbjct: 44 VDLSHRDVVRIAGPDRLTWLHSLTSQAFEGLAPGAWTSALILSPQGHVEH-FFSGVDDGT 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F+ + +L+D L K S+V + ++ V Q ++F R S+
Sbjct: 103 AFLAWTEPGAGSALVDYLERMKFWSDVTVTLETSQASVWRPAQGYSFV------PRESL- 155
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD----FLPSTIFPHDALMDLLN--- 176
+ A + LRI G D +P+ + D+
Sbjct: 156 -----EKYAAAAGPACGFWAFEALRIERGEPRFGVDTDARTIPNEVGWVPGAADVAGPEY 210
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVV 233
+ L KGCY GQE V+R+ +R +++ LP +GS ++ + +G +G
Sbjct: 211 AVHLDKGCYRGQETVARVHTLGRPPRRLVLLHLDGSENRLPVAGSELVFGEKTVGFVGSS 270
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
L + V + L V G+ V
Sbjct: 271 ARHHELGPIALGLVKRNVPVDAQLVVDGMPV 301
>gi|332977316|gb|EGK14104.1| glycine cleavage T protein [Psychrobacter sp. 1501(2011)]
Length = 250
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 37/248 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A FLQ+ +T ++ + +AI +G+I + K ED F + I
Sbjct: 12 ITLQGEDAGKFLQSQLTVNINKIDLSY-IPAAIANLKGRIEFGIWVKKQAEDQFDIVISA 70
Query: 72 SKRDSLIDKLLFYKLRSNVI----IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
SL L + S I+I P V+ + E + S +D+
Sbjct: 71 DCLPSLQAHLKKFGAFSKFTTSEPIDIYPC--VLGADTDEQEATFSHNVDK--------- 119
Query: 128 HRTWGHNEKIASDIKTYHELRINHG---IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
D++ + L I G IV+ + P + + G+ KGC
Sbjct: 120 -----------CDVEEWKALSIATGNYWIVEATQELFQ----PQELRLHQRGGVDYDKGC 164
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIA 242
Y+GQEV++RI + + + G ++P G+ + + +G +AL +A
Sbjct: 165 YLGQEVIARIYFKASPKAFLHRVKGEGEVPQPGAS-FDKVQIVNAIATQDKLGFEALVVA 223
Query: 243 RIDKVDHA 250
R + ++++
Sbjct: 224 RPEHLENS 231
>gi|126667163|ref|ZP_01738137.1| hypothetical protein MELB17_07399 [Marinobacter sp. ELB17]
gi|126628319|gb|EAZ98942.1| hypothetical protein MELB17_07399 [Marinobacter sp. ELB17]
Length = 349
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/303 (16%), Positives = 98/303 (32%), Gaps = 45/303 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ + V G FLQ + ++ + + +A +G+ + + ++D
Sbjct: 33 AELSDRLMLTVSGAGTDKFLQGQFSQNMSEVTAGKSLHAAASNRKGRAYALVRMVRHDDD 92
Query: 64 TFILEIDRSKRDSLIDKLLFY----------KLRSNVIIEIQPINGVVLSWNQEHTF--- 110
+++ R D+ +L Y +L + II I ++
Sbjct: 93 -ILMDFSRELADATEAELRKYLMLFRGTTMARLEDSKIIGIFGSELAQAVAGEQAALVTD 151
Query: 111 ---------------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
E +S L HN+ + T+ +I
Sbjct: 152 LRQPGDTLATGHGHLILLEPSIEGPARYELWSPDGALPDVLDAHNQSSQCSLATWQAGQI 211
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ T P L G+ KGCY GQE+++R+ ++K +
Sbjct: 212 AAGVP-WLTSATAGAYVPQMLNWQHLGGVHFKKGCYTGQEIIARMHFLGQLKKSLYRLAV 270
Query: 210 TDDL-PPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMALTVHGVR 263
T D P G I + +G + + LA+ R + + + + G
Sbjct: 271 TADAEPAVGDAISNGERNVGEVVNTLQTGPQQYHLLAVIRHNAANGPLTLADS---GGAS 327
Query: 264 VKA 266
++
Sbjct: 328 LQL 330
>gi|227541048|ref|ZP_03971097.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183308|gb|EEI64280.1| glycine cleavage T protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 409
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 34/283 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S V SN+ + V G FL T + + A + L G+I ++
Sbjct: 112 LSLVDRSNRVILSVTGDDREAFL----TNLLSKIIAPGATMALDLDANGRIQHEMDVAVT 167
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E++ F++ ++L D L+ S V I I P+ V + +HT +++F
Sbjct: 168 EDEVFLIVSPHE-AETLRDYLVAMIFWSKVEITISPLQLVTVF--GKHTPLDAAFAR--- 221
Query: 121 SIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPNTDFLPSTIFPH 168
+I L +G + A+ + ++ RI G D D PH
Sbjct: 222 TIPGTPLRTDYGVRDVEAAADAILQQNGQLAGLMSFEAYRIARGEPDHPVDC-DEKTIPH 280
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225
+ + L + L KGCY GQE V+R+++ + ++ LP +P+
Sbjct: 281 EVGLWLAEAVDLDKGCYRGQETVARVENLGRAPRALVVTLLDGSVPQLPAPQTPVTLAGR 340
Query: 226 EIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVH 260
+GTLG VV G ALA + + + + A++V
Sbjct: 341 TVGTLGSVVHHHELGPIALATIKASALQRSGEFMAGDCAMSVD 383
>gi|294056332|ref|YP_003549990.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
gi|293615665|gb|ADE55820.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
Length = 307
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 55/286 (19%), Positives = 102/286 (35%), Gaps = 38/286 (13%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ I + A FLQ+ + ++ L +GK++ I + +E++F+L
Sbjct: 13 ALIHASDEDAADFLQSQFSNELRPFAEGRCTYGLWLDVKGKVIADSFILQCDEESFLLYS 72
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDER----FSIA 123
S + L KL + + +V +EI V+ + E + + A
Sbjct: 73 ATSSAEGLQAKLEQHIIADDVELEISEGARVISLFGPGVESALTEWGASVPQTGDFVEHA 132
Query: 124 DVLLHRTW-GHNEKIAS-----------------------DIKTYHELRINHGIVDPNTD 159
V L W G ++ D + R+ G +
Sbjct: 133 GVRLLPVWNGPRPRVDCIVRDAAALDTVVDALKRLSVEFVDTNRFELERVEQGYPVVPQE 192
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGS 218
P + + +S TKGC++GQEVV+R+ + R+ ++G D P +
Sbjct: 193 LGEGD-LPGEGGAE-NYALSFTKGCFLGQEVVARMHNLGTPRRALYRVSGVGDPPAVPQA 250
Query: 219 PILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK-KGMALTV 259
+ G L G +A+ ++ V I +G ALT+
Sbjct: 251 LQTMEGKTAGELRSAFVTADGWLGVAMLKLSAVGAPIHLQGEALTL 296
>gi|254796700|ref|YP_003081536.1| aminomethyl transferase family protein [Neorickettsia risticii str.
Illinois]
gi|254589932|gb|ACT69294.1| aminomethyl transferase family protein [Neorickettsia risticii str.
Illinois]
Length = 310
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 57/281 (20%), Positives = 95/281 (33%), Gaps = 56/281 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDR 71
+ G+ FLQ IIT +V TL ILTP+G+++ + K +T +LE +
Sbjct: 12 SISGERVKAFLQGIITCNVETLEDCA--YGLILTPKGRLICDLFVYKCSTETELLLETNH 69
Query: 72 SKRDSLIDKLLFYKLRSNVII--------------------------------------- 92
++L+ L Y + + I
Sbjct: 70 CNTEALLSVLDLYNFKRGITIQQKAYFSYVGIPKSTDACVTQPEEAHQDTCKVPRTKGLT 129
Query: 93 ----EIQPINGVVLSWNQEHTFSNS------SFIDERFSIADVLLHRTWGHNEKIASDIK 142
++Q +V ++ T D R + + +
Sbjct: 130 GAVHDVQKFLEMVEGVSEAKTQLRFIKECLFCVRDPRNRKLGFRVVLSSSEFPTSEVCHE 189
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
Y +RI I + + P+ IFP + MD KGCY+GQEV+SR + +N I +
Sbjct: 190 EYQRIRIMSKISEAGKELKPN-IFPLEYAMDY--AFDFNKGCYVGQEVISRFRIKNFIER 246
Query: 203 RPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAIA 242
+ G + G I D +G LA+
Sbjct: 247 ALFCLQGEEGASLEEGDKIYLGDDMVGCFSSCCQNYGLAVL 287
>gi|284045623|ref|YP_003395963.1| folate-binding protein YgfZ [Conexibacter woesei DSM 14684]
gi|283949844|gb|ADB52588.1| folate-binding protein YgfZ [Conexibacter woesei DSM 14684]
Length = 336
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 64/316 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S + + + G FLQ +T DV L +A LT +GK+ + + D
Sbjct: 24 SERGKLALTGGETKRFLQGQVTNDVEALVPGSGCYAAFLTAKGKMRGDLRVLDVHVDARE 83
Query: 64 -----------------TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-------- 98
+L+ +R L + +KL +V + + +
Sbjct: 84 FPGQAGDQAPTGNSQCEALLLDCERVALQDLFTMVRQFKLGFDVELHRRTLERGLLSLVG 143
Query: 99 --------GVVLSWNQEHTFSNSSFIDE---------------RFSIADVLLHRTWGHNE 135
+ + + ++ +D S L R
Sbjct: 144 PRSRAVLGDAAAALGEPEHANVAATVDGIAVVLVATDVGVDLIADSAQTDALSRALLARG 203
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
A D LR+ G + T P +A ++ +S TKGCY+GQE V+R+
Sbjct: 204 AHAVDEPVVETLRVERGRPRYGAEL-DDTTIPQEADLN-DRAVSFTKGCYVGQETVARLF 261
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
++ + + + + P G+ ++ +G +G V G ALA+ R +
Sbjct: 262 YKGKPNRHLRGLRLSAPVAP-GTELMLGGKRVGAVGSVALSPAHGPIALALVRREA---- 316
Query: 251 IKKGMALTVHGVRVKA 266
+ G +T +
Sbjct: 317 -EPGATVTAGEATAEV 331
>gi|222834272|gb|EEE72749.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 47/262 (17%)
Query: 52 LLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------- 103
+ FL+ + + D +L++ + + +L + LR+ + +L
Sbjct: 1 MASFLMWR-DADGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEA 59
Query: 104 ----------WNQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIAS 139
T S+ + R + AD L ++ G +AS
Sbjct: 60 ALQQAGLPTPQAPLATASDDNVTVIRLADADGEPRWQIVAPAARIEALQQSLGATLAVAS 119
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ L + GI P +L+ G++ KGCY GQEVV+R Q+R
Sbjct: 120 P-AFWDWLDVASGIPRIAA-ATQEQFVPQMINFELIGGVNFRKGCYPGQEVVARSQYRGT 177
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--------GKKALAIARIDKVDHAI 251
+++R + GT D+P + + I + G++V G + LA +ID + A+
Sbjct: 178 LKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGAL 237
Query: 252 K----KGMALTVHGVRVKASFP 269
G A++ + + P
Sbjct: 238 HLGAASGPAVSTGALPYEVPLP 259
>gi|237755923|ref|ZP_04584514.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691922|gb|EEP60939.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 302
Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSA-----------IPFLQAIITADVLTLPYKIARGSAILTPQG 49
M+ + L ++ I V GK + FLQ I+T ++ L K + +L +G
Sbjct: 1 MNWIKLK-RNKILVKGKQSKLNLKGIKEEHTAFLQGILTNNIAQLNDKEFNYNLMLDHKG 59
Query: 50 KILLYFLISKIEEDTFI-LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
+ F + K E+ + E DR D + +KL KL V E+ + + +
Sbjct: 60 SPIWDFYVFKDNENYILDFECDR---DEVFNKLKQLKLSYQVFFEVLELEHIYIFGEDSE 116
Query: 109 TFSNSSF--IDERFS--------------IADVLLHRTWGHNEKIAS--------DIKTY 144
F +F + ERF +G+ E I S D +
Sbjct: 117 KFIQQTFNEVPERFKYLKSENIYIANNPLRLGQKGFDIFGNLESIKSSLPTDLKIDEGKF 176
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRIN+ I + + + P + + ISL KGCY+GQE ++R+ R +
Sbjct: 177 ENLRINNCIPKIGKELV-EKVLPLETNI-WKYAISLNKGCYVGQEAIARVYFRGKPPRVM 234
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+ + + L + +L +D +G + V K AI I +
Sbjct: 235 VKFSFDNALDEN-EKVLLNDKPVGFITSVNIKDKTAIGFILR 275
>gi|93005000|ref|YP_579437.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter
cryohalolentis K5]
gi|92392678|gb|ABE73953.1| glycine cleavage T protein (aminomethyl transferase) [Psychrobacter
cryohalolentis K5]
Length = 255
Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 41/275 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+++ L S + + G+ A FLQ +T DV L + +AI +G+I I K
Sbjct: 5 INTAALPQFSQLSIQGEDAEKFLQGQLTCDVTKLGLSY-QAAAIGNLKGRIEFGIWIKKQ 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E F + I ++ L + S T IDE
Sbjct: 64 AEKHFDMVISADCAEAFQGHLKKFGAFSKCD-------------TSAPTPIYPCVIDEVP 110
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDALMDLLN 176
+ + H T + +I+ + + I G + +F P + +
Sbjct: 111 TFSHQDDHNT-------SKNIQAWMQSSIATGNYWIVAATQGEFQ-----PQELRLHQRG 158
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI-----EIGTLG 231
G+ KGCY+GQEV++RI ++ + + GT + SG+ + + + +
Sbjct: 159 GMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGT-SVKGSGTTPVAGEKLDKVQVVNAIT 217
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G +AL +AR +++ +LT+ + +
Sbjct: 218 TSEGFEALVVARPEQLAE-----SSLTILDLPLAL 247
>gi|94969655|ref|YP_591703.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
gi|94551705|gb|ABF41629.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
Length = 342
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 58/288 (20%), Positives = 98/288 (34%), Gaps = 45/288 (15%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++ I G+ + +L +IT +V L S +L QG+I + + D +LE
Sbjct: 49 RAKIVATGEDRVRWLNGMITNNVRDLAVSRGVYSFVLNAQGRIQGDLIAFQRG-DYILLE 107
Query: 69 IDRSKRDSLIDKLLFYKLRSNVII----------------------------EIQPINGV 100
D S+ +SL + + +V I +++ ++ V
Sbjct: 108 TDESQAESLTALFDRFIIMDDVEIANVSEKLASIGVKGPKAAEVLREAGFPADLKALDVV 167
Query: 101 VLSWNQEHT--FSNSSFIDERFSIA-----DVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+WN +S F I V + + RI GI
Sbjct: 168 DATWNGVGISVACGASEQFPEFEIWFAPEHTVAVWDALVSAGAQPVGYEALELHRIATGI 227
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P + + + +KGCY+GQE+V RI R + R L
Sbjct: 228 PAFGQDIRERD-LPQET--AQSHALHFSKGCYVGQEIVERIHSRGNV-HRGFTGFSLSQL 283
Query: 214 PPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMA 256
SG+ ++ D E+G + V AL R + + G A
Sbjct: 284 VNSGTKLVRDGKEVGEITSVAELPSKKIIALGYVRREAATSELVAGDA 331
>gi|6705950|dbj|BAA89441.1| ORF4 [Corynebacterium ammoniagenes]
Length = 359
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 109/293 (37%), Gaps = 35/293 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I V G A FL +++ + + + + L QG+IL Y + + +E F
Sbjct: 45 SQRRVISVIGPDAPEFLNNLLSQKLDNVEPGYSAAALDLDIQGRILHYADVVRTDE-GFY 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----QEHTFSNSSFIDE---- 118
L+ ++ +S + L S V + + + L + ++++F+ E
Sbjct: 104 LDTTDAEFESFLKFLTMMVFWSKVEVAEADLAIITLLGQVPTLPDSVAASAAFVREVPNW 163
Query: 119 -RFSIADVLLHR--------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ D+ + R + + Y R+ + + D H+
Sbjct: 164 TQTPRTDIAVPREQLKDVAKELISAGFKPAGLMAYTAERVRNLEPEKAADL-DDKSIAHE 222
Query: 170 A-----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPIL 221
++ + L KGCY GQE ++R+++ + ++ +LP +G+ I
Sbjct: 223 IAHWIGRGEIPGAVHLEKGCYRGQETIARVENLGRSPRLLTLLHLDGSVPELPATGTDIT 282
Query: 222 TDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMA---LTVHGVRVKA 266
+ +G +G ++ G AL + + + K G L + V
Sbjct: 283 SGGRRVGRVGSIIDDFELGPIALGLIKRSALPTPEKAGSPAAELLIGDCAVTV 335
>gi|284028969|ref|YP_003378900.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
gi|283808262|gb|ADB30101.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
Length = 334
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 14/267 (5%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS++ + + G + +L A+ T + + + +L+P G + + +
Sbjct: 44 YVDLSHRDVVTISGPDRLTWLHALTTQYFEGMRPGTSTTALLLSPTGHVEH-AMYGVDDG 102
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---DER 119
+TF L + +L++ L S V I ++ W ++ +
Sbjct: 103 ETFWLHTEPGAAAALVEWLQKMVFMSRVEIADVTDAFAIV-WRPGTAPADGPLTRSGGDS 161
Query: 120 FSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ L R + + + Y LRI G D P++ +
Sbjct: 162 LGGYETFLPREELSAFAELAGPPAGVWAYEALRIEAGAPRLGLD-TDERAIPNELGWLGI 220
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGV 232
G+ L KGCY GQE V+R+ + +R + + LP G + D ++G +G
Sbjct: 221 -GVHLDKGCYRGQETVARVHNLGRPPRRLVRLHLDGSVDHLPAHGYAVRAGDKQVGFVGS 279
Query: 233 VVGKKALAIARIDKVDHAIKKGMALTV 259
L + V ++ L V
Sbjct: 280 AARHHELGPIALALVKRSVDPAAELQV 306
>gi|88608631|ref|YP_506208.1| aminomethyl transferase family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600800|gb|ABD46268.1| aminomethyl transferase family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 310
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 96/281 (34%), Gaps = 56/281 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDR 71
+ G+ FLQ IIT +V TL ILTP+G+ + + + +T +LE +R
Sbjct: 12 SIGGERVKAFLQGIITCNVETLEDCA--YGLILTPKGRFICDLFVYRCSTETELLLETNR 69
Query: 72 SKRDSLIDKLLFYKLRSNVII--------------------------------------- 92
++L+ L Y + +++I
Sbjct: 70 CNTEALLRVLDLYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTCRGPRIKKLT 129
Query: 93 ----EIQPINGVVLSWNQEHTFSN------SSFIDERFSIADVLLHRTWGHNEKIASDIK 142
++ +V ++ T D R + + +
Sbjct: 130 DAVRDVCKFLEIVEGASETKTQLGLIEKCLFCVRDPRNRKLGFRVVLSSSEFPTSEVCHE 189
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
Y +RI I + + P+T FP + MD KGCY+GQEV+SR + R+ I +
Sbjct: 190 EYQRIRIMSKISEAGKELKPNT-FPLEYAMDY--AFDFNKGCYVGQEVISRFRIRDFIER 246
Query: 203 RPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGKKALAIA 242
+ + G I D +G L LA+
Sbjct: 247 ALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVL 287
>gi|300780493|ref|ZP_07090349.1| folate-binding protein YgfZ [Corynebacterium genitalium ATCC 33030]
gi|300534603|gb|EFK55662.1| folate-binding protein YgfZ [Corynebacterium genitalium ATCC 33030]
Length = 396
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 35/287 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I+V G A FL +++ + + + L QG+IL + +++ ED F
Sbjct: 51 SHRHVIRVAGPDAPVFLNNLLSQKLDDVSPGFTAAALDLDMQGRILHHADVTRT-EDAFY 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-SIADV 125
L++ ++ +D L S+V +E + + + F D
Sbjct: 110 LDVPSYAFETFLDFLTKMIFWSDVTVEEADLAILTVLGAPSSFDPGVLAATPAFVRTVDW 169
Query: 126 LLHR-------------------TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
R + I T+ RI + D +
Sbjct: 170 RGPRRVDIAVPRQELMNAFRALTGADGAALTPAGIMTFTAERIKALEPEQRADL-DAKSI 228
Query: 167 PHD-----ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGS 218
PH+ A L + L KGCY GQE V+R+++ + +++ P G
Sbjct: 229 PHEVHTLIARGGNLGAVHLDKGCYRGQETVARVENLGRSPRLLVMLHIDGSAPVDPQPGD 288
Query: 219 PILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVH 260
I +G LG V G LA+ + ++ G A V
Sbjct: 289 TITMGGRTVGRLGSVAHDCDYGPIGLALVKRSALNAPATSGPAAAVG 335
>gi|329894324|ref|ZP_08270194.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [gamma proteobacterium IMCC3088]
gi|328923120|gb|EGG30443.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [gamma proteobacterium IMCC3088]
Length = 272
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 6/237 (2%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A LQ +T DV +L + + +G++ L + K + L +
Sbjct: 13 LELIGPDAAKTLQGQLTNDVESLRNRKGLDGLLCNLKGRVELVVKVYKHSPEQLTLVVPT 72
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
+ D+L +L Y S + + L + F ++ +
Sbjct: 73 ANIDALKRRLAPYVAFSKSRLNELNLETYSLVIAPPDSDPIEVPAGLWFGDLGLISPQAI 132
Query: 132 GHNEKI--ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+ AS I +H RI+ G++ + P +D L +S KGCY+GQE
Sbjct: 133 NQLTRPYTASSIDEFHHWRIHSGMIQLTPE-QSGLYTPQALSLDRLGYVSFKKGCYMGQE 191
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---LAIAR 243
+++R+ ++ + + ++ + L +GT+ ++ LA R
Sbjct: 192 IIARLHYKGQSKHQLALLQCSPGLTTESKITSQTGDLVGTVVDAGANRSGYYLASVR 248
>gi|227833984|ref|YP_002835691.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|227455000|gb|ACP33753.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 353
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 30/271 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF
Sbjct: 51 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERFS 121
L++ ++ +SL D L S V +E V+ Q +++ ++
Sbjct: 110 LDVPTAQFESLRDFLTAMVFWSQVTVEEAD-AAVITVLGQPLQKPSAALVERSVQWPGCP 168
Query: 122 IADVLLHRTWGHNEKIA--------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--- 170
D L+ R + + Y R+ + D H+
Sbjct: 169 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDL-DEKTIAHEVPQW 227
Query: 171 ---LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224
D+ + L KGCY GQE V+R+++ + +++ P SG+ I
Sbjct: 228 IRRNDDVPAFVHLEKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPERPDSGADITLGG 287
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G LG VV G AL + + ++H
Sbjct: 288 RRVGRLGTVVEDCDYGPIALGLIKRSALNHG 318
>gi|255325915|ref|ZP_05367007.1| glycine cleavage T-protein, C- barrel [Corynebacterium
tuberculostearicum SK141]
gi|255297127|gb|EET76452.1| glycine cleavage T-protein, C- barrel [Corynebacterium
tuberculostearicum SK141]
Length = 354
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/296 (20%), Positives = 108/296 (36%), Gaps = 41/296 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I+V GK A FL +++ + P G+ L QG IL + I + +D F+
Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRT-DDAFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------NSS 114
+++ ++ DSL L S V +E I + L + +
Sbjct: 110 IDVPAAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWSGIK 169
Query: 115 FID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+D R S+ + H + + + + R+ + D + PH+
Sbjct: 170 RVDLGVPRESLVEATKH--LEESGARLAGLMAFTAERVRAREPELAADL-DNKSIPHEVP 226
Query: 172 M------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILT 222
D + L KGCY GQE V+R+++ + + + P G I
Sbjct: 227 QWISRSVDNPAHVHLNKGCYRGQETVARVENLGRSPRLLVQLHLDGSAPQRPNVGDDITF 286
Query: 223 DDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA---SFPH 270
+ ++G +G +V G AL + + A+ G L V S P
Sbjct: 287 NGRKVGRIGTIVDDCDFGPIALGLVK----RSALDAGT-LEVGDTAASIDPSSIPE 337
>gi|148652133|ref|YP_001279226.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter
sp. PRwf-1]
gi|148571217|gb|ABQ93276.1| aminomethyltransferase related to GcvT-like protein [Psychrobacter
sp. PRwf-1]
Length = 247
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 30/246 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G A FLQ IT +V L + +AI +G+I I K ++ F + I
Sbjct: 9 ITLQGDDAAKFLQGQITVNVNRLTASY-QPAAIANLKGRIEFGLWIKKQDDKQFDIVISS 67
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
L L + S I + E + +F
Sbjct: 68 DCLAPLQAHLKKFGAFSKFTIS--EPIDIYPYVGNEAGQAQPTF---------------- 109
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
++ + I G T+ + P + + G+ KGCY+GQEV+
Sbjct: 110 -SENADEQNMTDWMSASIATG-NYWITEATQTLFQPQELRLHQRGGVDYDKGCYLGQEVI 167
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDK 246
+RI + + + GT P +G + +I + + G +AL +AR ++
Sbjct: 168 ARIYFKAAPKAFLHRVKGTGAAPKAGESL----DKIQVVNAIDLADGSGYEALVVARPEQ 223
Query: 247 VDHAIK 252
++ A +
Sbjct: 224 LEQAQQ 229
>gi|262196877|ref|YP_003268086.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
gi|262080224|gb|ACY16193.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
Length = 267
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 104/269 (38%), Gaps = 34/269 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G FLQ + +AD+ L + IL+ +G+++ ++ E+D +
Sbjct: 6 SEWGHIRVTGSDRARFLQGMCSADIEALAPGDWTRAVILSVKGRVVSIIEVACREDD-LL 64
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ D + L + + V E QP++ + + S+ D
Sbjct: 65 ITCQADIADKTLSVLDKHAIMDEVAFEHVAQPMHRIW--------DTPSAVWD------- 109
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ A+ + RI G+ D + FP ++L+D ++ KGC
Sbjct: 110 --APPIFAPPPGPAASAEQLEIRRIEAGMPRYGVD-VSEDYFPFESLLDR--HVNHKKGC 164
Query: 185 YIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKK 237
Y+GQE VSR+ HR +KR + I G + +P + + + + GT+ G
Sbjct: 165 YLGQEPVSRVHHRGGAQKRLRGLRIEGDEPVPAGAAIVHAERAKAGTVSSAARSPEFGSI 224
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRVKA 266
AL G ++V G R
Sbjct: 225 ALGYI----HRSVFAPGNEVSVDGRRATI 249
>gi|46205197|ref|ZP_00209741.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 115
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M L +++ + V G A FLQ I+T +V TLP AR A+LTPQGKI FL+S+
Sbjct: 1 MPIALLPDRAVVAVSGPDATAFLQGILTCNVETLPEGEARLGALLTPQGKIQFDFLVSRA 60
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
D F LE + L+ +L Y+LR+ V + P GV +W+ T + ++ +
Sbjct: 61 G-DGFRLETAAERVADLVKRLGLYRLRAKVSLAADPTLGVAAAWDGAETAAETARV 115
>gi|262183527|ref|ZP_06042948.1| putative aminomethyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 318
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 30/271 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ + + + G+ L QG +L + +S + +TF
Sbjct: 16 SHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGALDLNIQGHVLHHMDLS-FDGETFY 74
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERFS 121
L++ ++ +SL D L S V +E V+ Q +++ ++
Sbjct: 75 LDVPTAQFESLRDFLTAMVFWSQVTVEEAD-AAVITVLGQPLQKPSAALVERSVQWPGCP 133
Query: 122 IADVLLHRTWGHNEKIA--------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDA--- 170
D L+ R + + Y R+ + D H+
Sbjct: 134 RQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRAREPELAGDL-DEKTIAHEVPQW 192
Query: 171 ---LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224
D+ + L KGCY GQE V+R+++ + +++ P SG+ I
Sbjct: 193 IRRNDDVPAFVHLEKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPERPDSGADITLGG 252
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHA 250
+G LG VV G AL + + ++H
Sbjct: 253 RRVGRLGTVVEDCDYGPIALGLIKRSALNHG 283
>gi|311740216|ref|ZP_07714048.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304771|gb|EFQ80842.1| folate-binding protein YgfZ [Corynebacterium pseudogenitalium ATCC
33035]
Length = 354
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 58/294 (19%), Positives = 106/294 (36%), Gaps = 37/294 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I+V GK A FL +++ + P G+ L QG IL + I + +D F+
Sbjct: 51 SQRRVIRVSGKDAAEFLNNLLSQKLDDAPVGFTAGALDLDIQGHILHHMDIVRT-DDAFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-----NSSFIDERFS 121
+++ ++ DSL L S V +E I + L + + +
Sbjct: 110 IDVPGAQFDSLFKFLTMMVFWSEVTVEEADIAILTLLGEADVSLPPMVEFSRQVQWPGIK 169
Query: 122 IADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
D+ + R + + + + R+ + D + PH+
Sbjct: 170 RVDLGIPRESLVEATKHLEESGARLAGLMAFTAERVRAREPELAADL-DNKSIPHEVSQW 228
Query: 174 LLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDD 224
+ + L KGCY GQE V+R+++ + + + P G I +
Sbjct: 229 ISRSTANPAHVHLNKGCYRGQETVARVENLGRSPRLLVQLHLDGSAPQRPNVGDDITFNG 288
Query: 225 IEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA---SFPH 270
++G +G +V G AL + + A+ G L V S P
Sbjct: 289 RKVGRIGTIVDDCDFGPIALGLVK----RSALDAGT-LEVGDTAASIDPSSIPE 337
>gi|16331555|ref|NP_442283.1| hypothetical protein slr0635 [Synechocystis sp. PCC 6803]
gi|1001622|dbj|BAA10353.1| slr0635 [Synechocystis sp. PCC 6803]
Length = 312
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/303 (19%), Positives = 104/303 (34%), Gaps = 48/303 (15%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L S I + G+ FL T V + + G+ L + + +
Sbjct: 12 LYPLPEFSLIALQGEDRRRFLHNQTTNAVEARAVGEWFETVFVNSTGRTLELATVY-VRQ 70
Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEI--------------------------- 94
D+ L+++ ++D L + + V +
Sbjct: 71 DSLWLQVEAGQKDFLWQWMDRFIFPFDKVELRDLSAHYRAVVLLGEKVEEHNLGWQLPTG 130
Query: 95 -----QPINGV--VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
Q + GV ++S + I + L+++ WGH I D + L
Sbjct: 131 NQWLAQSVQGVELLISAQTGLDLPGYTVIFP--ADQQELVNQLWGHLPLINPD--QWESL 186
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI G + P +A + IS TKGCYIGQE ++R+ +++R I
Sbjct: 187 RIYQGRPQAGKELT-EDYNPLEAGL--WRAISFTKGCYIGQETIARLNTYQGVKQRLWRI 243
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
T D +G+ I + ++G L V G L + VD +GM + +
Sbjct: 244 TL-DRQAEAGTVITLEGQKVGILTSVKGLTGLGYLKTKLVD----QGMTVQLGEAIATVE 298
Query: 268 FPH 270
P
Sbjct: 299 KPP 301
>gi|115372192|ref|ZP_01459503.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
gi|115370894|gb|EAU69818.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
Length = 358
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 58/317 (18%)
Query: 3 SVYLSN---QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+V L + + +++ G+ FL ++T DV L +A++T +G ++ + K
Sbjct: 42 AVALHDASYRETLRITGEDRASFLHGMVTQDVKGLAPGATAYAALITAKGAMVADARLLK 101
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--- 116
+ D +++++ + + L Y + + + +L T +
Sbjct: 102 RDTD-LLMDLEPGTGAKVREFLDKYLISEDAELHEATGEWALLRLLGPKTPEVLAAALGA 160
Query: 117 ------------------------DERFSIADVLLHRTWGHNEKIASDI----------- 141
F+ V L E + +
Sbjct: 161 PFEPLASPASRQVTLAGAPVVVLGPPAFAPQGVDLWVPREALEPVWRALVAAGAAHGLKP 220
Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ LR+ G+ D + T P +A + + IS KGCYIGQEV++R R
Sbjct: 221 LGFQALELLRVEAGVPRYGQDMV-DTTIPLEANL--THAISYNKGCYIGQEVIARATFRG 277
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
+ ++ + + G+ + + ++G L VV + AL D +D
Sbjct: 278 HMNRKLTGLLLGEAEAEPGTELRKGEKKVGWLTSVVRSPAQGQRVALGYVHRDHLD---- 333
Query: 253 KGMALTVHGVRVKASFP 269
G LT+ P
Sbjct: 334 PGTELTLGEGPTVKVAP 350
>gi|148244472|ref|YP_001219166.1| hypothetical protein COSY_0317 [Candidatus Vesicomyosocius okutanii
HA]
gi|146326299|dbj|BAF61442.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 223
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 50/225 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+KV G A FLQ ++ D++++ + +A QGK++ F ++K + D F L +
Sbjct: 7 LKVSGVDAQSFLQGQLSNDIVSIGENEWQLNAYCQHQGKVIALFWVTKYKND-FYLNFPK 65
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
S +D + L + L S+V I
Sbjct: 66 SLQDKIFKHLHIFVLMSDVEI--------------------------------------- 86
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF-PHDALMDLLN-GISLTKGCYIGQE 189
+ + TY + + P + S F P + +D+ G++ +KGCY GQE
Sbjct: 87 -----VQTSFNTYPPIDVMK---HPEVYLITSEKFVPQELNLDINEVGVNFSKGCYPGQE 138
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+V+R+ + ++R + L I D + G+VV
Sbjct: 139 IVARLHYLGKPKRRMRLFECEQILKVGDKLIALDSKSVKASGIVV 183
>gi|226226002|ref|YP_002760108.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27]
gi|226089193|dbj|BAH37638.1| putative aminomethyl transferase [Gemmatimonas aurantiaca T-27]
Length = 357
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 40/274 (14%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ ++ G A L ++T DV L ++ +A LTP+GK++ I + +EDTF++
Sbjct: 50 WRWTRIQGPKAADALNGLVTNDVTLLAVNASQYAAALTPKGKMVADMTIVRADEDTFLVG 109
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--------DERF 120
+D + + Y + + + +W ++ R
Sbjct: 110 VDAGAVEGWLGLARKYINPR--LARTTDESALWNTWAIYGRNIATALQSLGIGENGAARI 167
Query: 121 SIADVLLHRTWGHNE------------------------KIASDIKTYHELRINHGIVDP 156
AD+ + S RI G
Sbjct: 168 GDADIRVVPGPTLAGMSGVWLIVPTDHAEHVRERIVAICGPESGAAVAELARIEGGRPSM 227
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D P +A +D L+ IS TKGCY GQE V+R+ R + + ++ L
Sbjct: 228 FMDM-DENTIPQEANLDTLDAISFTKGCYTGQETVARVHFRGHVNRHLRAVSSPVPLTRG 286
Query: 217 GSPILTDDIEIGTLGVVV-----GKKALAIARID 245
S + +G + G A+A+ R +
Sbjct: 287 TSLVDDAGKVVGEVRSSAISPRLGPIAIALVRRE 320
>gi|313215504|emb|CBY16216.1| unnamed protein product [Oikopleura dioica]
Length = 191
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+FID R R + ++ YH R GI + + + FP +
Sbjct: 15 GDTFIDPRLEKMGA---RVLNNPNLPTMSLEDYHTHRYKLGIPEGGEEIPFNKGFPLECN 71
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
DL++G+S KGCY+GQE+ +R H + RKR + + + P + + G +
Sbjct: 72 CDLMSGVSFHKGCYLGQELTARTFHTGVTRKRIVPLKFS---PGNDVSDIKAKRSAGKII 128
Query: 232 VV-VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
V LA+ R D D +K V + + P W+
Sbjct: 129 TVDSEGNGLAMFRTDNFDKTVK------VGEEEIVITKPSWW 164
>gi|310818801|ref|YP_003951159.1| glycine cleavage system t protein [Stigmatella aurantiaca DW4/3-1]
gi|309391873|gb|ADO69332.1| Glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1]
Length = 333
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 105/308 (34%), Gaps = 55/308 (17%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ G+ FL ++T DV L +A++T +G ++ + K + D +++
Sbjct: 26 RETLRITGEDRASFLHGMVTQDVKGLAPGATAYAALITAKGAMVADARLLKRDTD-LLMD 84
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------------ 116
++ + + L Y + + + +L T +
Sbjct: 85 LEPGTGAKVREFLDKYLISEDAELHEATGEWALLRLLGPKTPEVLAAALGAPFEPLASPA 144
Query: 117 ---------------DERFSIADVLLHRTWGHNEKIASDI--------------KTYHEL 147
F+ V L E + + + L
Sbjct: 145 SRQVTLAGAPVVVLGPPAFAPQGVDLWVPREALEPVWRALVAAGAAHGLKPLGFQALELL 204
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D + T P +A + + IS KGCYIGQEV++R R + ++ +
Sbjct: 205 RVEAGVPRYGQDMV-DTTIPLEANL--THAISYNKGCYIGQEVIARATFRGHMNRKLTGL 261
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261
+ G+ + + ++G L VV + AL D +D G LT+
Sbjct: 262 LLGEAEAEPGTELRKGEKKVGWLTSVVRSPAQGQRVALGYVHRDHLD----PGTELTLGE 317
Query: 262 VRVKASFP 269
P
Sbjct: 318 GPTVKVAP 325
>gi|269124918|ref|YP_003298288.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
gi|268309876|gb|ACY96250.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
Length = 328
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 20/267 (7%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
N+ I+V G + +L ++++ + L + +L+P G++ + + + +
Sbjct: 46 NRGVIRVSGPDRLKWLHSLLSQHLEHLEPHRPTQALLLSPHGRVEHHLHLV-DDGEAVWA 104
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------QEHTFSNSSFIDERF 120
++ +L++ L + V + V++ + + SS+I ER
Sbjct: 105 HVEVGTAPALVEFLDRMRFLLRVEVADLTDRYAVVTGAVDVPGALEFPDVAGSSWIIERS 164
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ L R + + Y LRI D PH+A + + L
Sbjct: 165 A-----LPRLPEAARP--AGLWAYEALRIAAHRPRLGLD-TDERTIPHEAGW-IDEAVHL 215
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKK 237
KGCY GQE V+R+ + +R +++ LP G P+ +G +G
Sbjct: 216 NKGCYRGQETVARVHNLGRPPRRLVMLHLDGSVDHLPAHGDPVELGGRRVGFVGTAARHH 275
Query: 238 ALAIARIDKVDHAIKKGMALTVHGVRV 264
L + V + L GV
Sbjct: 276 ELGPIALAMVKRTVPVDAELLAGGVAA 302
>gi|289804664|ref|ZP_06535293.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 281
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 28 TADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLR 87
TADV + + +A +GK+ + + + +E RS R++ + +L Y +
Sbjct: 1 TADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRERDGFAWIE-RRSVREAQLTELKKYAVF 59
Query: 88 SNVIIEIQPINGVV------------------------LSWNQEHTFSNSSFIDERF--- 120
S V+I ++ + + T ERF
Sbjct: 60 SKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPAERFLLV 119
Query: 121 ---SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+ A++L + G E ++ + + L I GI + P + L G
Sbjct: 120 TDVATANMLTEKLHGEAE--LNNSQQWLALDIEAGIPVIDA-ANSGQFIPQATNLQALGG 176
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220
IS KGCY GQE+V+R + R ++ ++ G +P +G +
Sbjct: 177 ISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDL 220
>gi|260578351|ref|ZP_05846266.1| aminomethyltransferase [Corynebacterium jeikeium ATCC 43734]
gi|258603532|gb|EEW16794.1| aminomethyltransferase [Corynebacterium jeikeium ATCC 43734]
Length = 410
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 69/324 (21%), Positives = 107/324 (33%), Gaps = 67/324 (20%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ I+V G +L +I+ V + A IL +G + +F I ED IL
Sbjct: 61 DRVAIRVSGPERRDWLNNLISQKVNAIEPGQATFGLILDVKGHVEHFFGILAT-EDALIL 119
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA---- 123
+ + D+L D L S V +E P + + T S+ D S A
Sbjct: 120 DTPATHADALEDYLSKMVFWSQVSVERLPWARLTVIGTDLATDSSLFTYDATSSAALPAQ 179
Query: 124 ---------DVLLHRTWGHNEKIASDIK-----------------------TYHELRINH 151
D+ L RT E A D+ Y R+
Sbjct: 180 LKINVPENIDLQLWRTGTIGELQALDLWVSREGFTRSWDELNNIAQPTGRMAYDAFRVQA 239
Query: 152 GIVDPNTDFLPSTIFPHDA-------------LMDLLNG-----ISLTKGCYIGQEVVSR 193
D PH+ L D+ G + L KGCY GQE VSR
Sbjct: 240 RQPVLGVD-TDDRAIPHEIPAFIGRGISGATQLDDVSAGPTEAAVHLNKGCYRGQETVSR 298
Query: 194 IQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR-- 243
+ + + +++ LP G+ + IG +G V G ALA+ +
Sbjct: 299 VHNLGKSPRVLVMLQLDGSANRLPEVGAELTAGGRAIGRVGSSVHDCDYGPIALALVKRN 358
Query: 244 -IDKVDHAIKKGMALTVHGVRVKA 266
++K+ L G+
Sbjct: 359 VVEKLASKNSDVPPLLADGIDASI 382
>gi|38234484|ref|NP_940251.1| hypothetical protein DIP1917 [Corynebacterium diphtheriae NCTC
13129]
gi|38200747|emb|CAE50450.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 353
Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 105/290 (36%), Gaps = 28/290 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G+ A FL +++ ++ LP+ A + L QG ++ + I +E F
Sbjct: 45 SHRGVLCISGEDAAVFLNNLVSQKLIDLPHPWAGEALDLDIQGHVVHHMEIIATDE-VFY 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----------GVVLSWNQEHTFSNSSFI 116
+ + ++ +SL S V IE+ ++ + S I
Sbjct: 104 VHVPAAQLESLHTFFTRMIFWSKVTIEVIDAAVISVISAQHLDALVDVPLPEALAVSPVI 163
Query: 117 DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D D+L+ R + + + Y R+ + D +T PH
Sbjct: 164 DFSLPRRDILVPRASLMAVAASLQEHGFQPAGMMAYTAARVRSVQPVMSLDM-DATTIPH 222
Query: 169 DA-----LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220
+A D + + L KGCY GQE V R+++ + +++ P +P+
Sbjct: 223 EAASLIGRGDHIGAVHLNKGCYRGQETVGRVENLGRSPRVLVMVLIDGSAPEQPHPAAPL 282
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+G LG VV L + V + K L + P
Sbjct: 283 TAGGRTVGFLGTVVDDFELGPIGLAVVKRSALKSATLQAGDDVALSIDPD 332
>gi|68535437|ref|YP_250142.1| putative aminomethyltransferase [Corynebacterium jeikeium K411]
gi|68263036|emb|CAI36524.1| putative aminomethyltransferase [Corynebacterium jeikeium K411]
Length = 424
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/324 (20%), Positives = 105/324 (32%), Gaps = 67/324 (20%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ I++ G +L +I+ V + A IL +G + +F I +D IL
Sbjct: 75 DRVAIRISGPERRDWLNNLISQKVNAIAPGQATFGLILDVKGHVEHFFGILAT-DDALIL 133
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA---- 123
+ + D+L D L S V +E P + + S+ S D A
Sbjct: 134 DTPATHADALEDYLRKMVFWSQVTVERLPWARLTVIGTGLVADSSLSLNDATSPAALPDQ 193
Query: 124 ---------DVLLHRTWGHNEKIASDIK-----------------------TYHELRINH 151
D+ L R E D+ Y RI
Sbjct: 194 LKIDIPDDLDLQLWRFGTIGEMQTLDLWVSRDYFVDTWDQFTDVATPAGRMAYDAFRIQA 253
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGIS------------------LTKGCYIGQEVVSR 193
+ D PH+ + GIS L KGCY GQE VSR
Sbjct: 254 RLPILGVD-TDERAIPHEVPAFIGRGISGATQLDDVAAGPTEAAVHLNKGCYRGQETVSR 312
Query: 194 IQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR-- 243
+ + + +++ LP G+ + IG +G V G ALA+ +
Sbjct: 313 VHNLGKSPRVLVLLHLDGSANRLPKVGADLTAGGRAIGRVGSSVHDCDYGPVALALVKRN 372
Query: 244 -IDKVDHAIKKGMALTVHGVRVKA 266
++KV + L G+
Sbjct: 373 VVEKVASKNSEVPPLLADGIDASI 396
>gi|21672687|ref|NP_660754.1| hypothetical protein BUsg420 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091589|sp|Q8K9C6|YGFZ_BUCAP RecName: Full=tRNA-modifying protein ygfZ
gi|21623327|gb|AAM67965.1| unknown protein from 2d-page (spot pr51) [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
Length = 319
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 98/267 (36%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ L I +CG + LQ T D+ L + + A GK+ I
Sbjct: 19 LTLSLLEEWCLIYICGIDSKKHLQNQFTIDINCLKKEEYKLCAHCNFNGKVWATMFIFHY 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID-- 117
++ + I +S I +L Y + S V I E+ I LS F + +F+D
Sbjct: 79 KKGFAYI-IRKSIAKIQIKELKKYAIFSKVEIRELDDIYLFGLSGFNAKFFLSKNFVDIP 137
Query: 118 ---------------------ERFSIADVLLHRTWGHNEK----IASDIKTYHELRINHG 152
ERF + L ++ + ++ K + I G
Sbjct: 138 NKNCSLISNQDRTILWFSEPCERFLLVLSLKDLLLLKRKENEITLLNNSKQWLLFDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P + LL +S KGCY GQE ++R+ ++N+ + +++ +
Sbjct: 198 FPIIDKQ-TSQKFLPQSINLILLQAVSFDKGCYYGQETIARVFYKNLNKYSLYLLSSKGN 256
Query: 213 L-PPSGSPILTDDIE----IGTLGVVV 234
+ P GS I E IG L +V
Sbjct: 257 INPKIGSIIEMKKEEKWYRIGFLLAIV 283
>gi|159029184|emb|CAO87544.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 337
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 45/304 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ S+ +++ G+ + FL + + L + L G+ L F+ +
Sbjct: 33 LIDRSHWGLLELKGQDRLRFLHNQTSNAIDRLKPGQGCETIFLNSTGRTL-DFVTVYAGD 91
Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTF----------- 110
D+ ++ + +R L++ + Y V I N + + +
Sbjct: 92 DSLLILVSPQRRQFLLELIDRYIFPFDKVEISDLTDNFSIFTLIGTESGQYLQKIAVPEQ 151
Query: 111 -------SNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDIKTYH 145
S+ D +A L N +D + +
Sbjct: 152 ILTGVQHSHYLLSDPPLRVAVGTGLDIPGYTLIVAASEAGPLWENLIKNGVTPADEQVWE 211
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LRI+ G + + P +A + I KGCYIGQE ++R+ +++R
Sbjct: 212 YLRIHQGRPAVDRELT-EDYNPLEAGL--WRAIVFDKGCYIGQETIARLNTYKGVKQRLW 268
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
I + +P S +PI+ + ++G L V+ L + +K + +
Sbjct: 269 GIKLSQPVP-SNTPIILEAQKVGLLTSVLEDFGLGYVKTKAGGEGLKVQIGEATGEL--- 324
Query: 266 ASFP 269
S P
Sbjct: 325 ISLP 328
>gi|119718469|ref|YP_925434.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides
sp. JS614]
gi|119539130|gb|ABL83747.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides
sp. JS614]
Length = 324
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 100/271 (36%), Gaps = 16/271 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KI 60
V LS++ +++ G + +L ++ T L ++ G+ +L+PQG + F
Sbjct: 42 VDLSHRDVVRISGPDRLTWLHSLTTQHFEALAPRLWTGALVLSPQGHVEHAFFGYDDGGG 101
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++ F + +L++ L + V E+ + + + + +
Sbjct: 102 DDGAFTAHTEPGAAAALVEFLDRMRFMMRV--EVADVTDELAVTWRPSASAEGPYAGYEL 159
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
D L + A + + LRI G D P++A + + L
Sbjct: 160 IRRDQLT--AYAEAAGPACGLWAFEALRIARGEPRLGLD-TDHRTIPNEAGW-IGPAVHL 215
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL----TDDIEIGTLGVV 233
KGCY GQE V+R+ +R ++ LPP G+ +L D +G +G
Sbjct: 216 DKGCYRGQETVARVHTLGRPPRRLTLLHLDGSENRLPPVGADLLLGDPADGKVVGFVGTS 275
Query: 234 VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
L + V + LTV G+
Sbjct: 276 ARHYELGPIALAMVKRNVPLDAPLTVDGMPA 306
>gi|225166049|ref|ZP_03727792.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2]
gi|224799709|gb|EEG18195.1| folate-binding protein YgfZ [Opitutaceae bacterium TAV2]
Length = 321
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/286 (20%), Positives = 109/286 (38%), Gaps = 38/286 (13%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ +++ G+ A FLQ I+ + T + A L +GK++ K+ + + L
Sbjct: 21 AVLRLTGEDASSFLQGQISQETRTTLPQPAIYGLFLNHKGKVIADAYALKVSDAEWWLWS 80
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADV-- 125
+ S + L L + + +V IE + + + L+ E S S+ I + A
Sbjct: 81 EASPANVLAHHLESFIVADDVTIEDRSGDWTLTTLAGPSEAAASLSALIGQPLPEAGAYA 140
Query: 126 --------LLHRTWGHNEKIASDIKT------Y--------HELRINHGIVDPNTDFLPS 163
R G + K + + RI GI D P
Sbjct: 141 RVGEGFMFRGRRGLGDSWKWLAPAAAQPTLDGWTPPDPMLMERARIEAGIPRVPVDIGPG 200
Query: 164 TIFPHDALMDLLNG-ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-GSPIL 221
PH+ + + IS TKGCY+GQE+++R++ +R+R + + G +P + + +
Sbjct: 201 D-LPHEGGPEFVAASISYTKGCYLGQEIMARLK-SGQVRRRLVRVRGEGVVPEALPATLY 258
Query: 222 TDDIEIGTLGVVV--------GKKALAIARIDKVDHAIKKGMALTV 259
D G L V G LA+ + + + ++
Sbjct: 259 RDGRAAGELRSAVAAGSDRSGGFAGLALVTLAGLAGGSTAQVTFSI 304
>gi|33519725|ref|NP_878557.1| putative aminomethyltransferase [Candidatus Blochmannia floridanus]
gi|81666840|sp|Q7VRF7|YGFZ_BLOFL RecName: Full=tRNA-modifying protein ygfZ
gi|33504070|emb|CAD83331.1| aminomethyltransferase; glycine cleavage T-protein [Candidatus
Blochmannia floridanus]
Length = 336
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 41/259 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ ++L N IK+ G I +L T D+ L +A G+++ + I
Sbjct: 20 LTLMFLKNWILIKLQGTDIIQYLHNQFTCDIKNLNKNQYSFAAHCNFNGRMISNMYVFYI 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------------------P 96
+ I + Y SNV I P
Sbjct: 80 NNQKIAFIEPLNIHHKQISIMQKYATFSNVTITPDYNVTLIGASGLYVKKYLNTFFTTLP 139
Query: 97 INGVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRI 149
++ T + +RF +I D LL++T + + L I
Sbjct: 140 DTKNMVIHYPGITLLHFKLPIDRFLLIIYDQTILDFLLNKT-QSFPIYYNSYHQWTALDI 198
Query: 150 NHGIVDPNTDFLPSTIF-PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G DF S +F P A MD+L GIS KGCYIGQE+V+RIQH + ++ +T
Sbjct: 199 EAGYP--YIDFATSELFFPQAANMDILQGISFNKGCYIGQELVARIQHYKLNKQSLYQLT 256
Query: 209 GT------DDLPPSGSPIL 221
+ LP SG I+
Sbjct: 257 SNTYHNQHNQLPVSGDHIV 275
>gi|145296576|ref|YP_001139397.1| hypothetical protein cgR_2484 [Corynebacterium glutamicum R]
gi|140846496|dbj|BAF55495.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 373
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 34/287 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 132
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119
L+ ++ D+LI L S V +E + + L QE + ++ F R
Sbjct: 133 LDTSAAEFDTLIGFLTKMIFWSEVTVEEADLAIITL-LGQEISLPDAVFARRVDWNGPSR 191
Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170
+A + G ++ + + K Y R+ D PH+
Sbjct: 192 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 250
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226
+ L + LTKGCY GQE V+R+ + + +++ P +G+ I
Sbjct: 251 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 310
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+G LG VV G AL + + +D L + V V
Sbjct: 311 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 351
>gi|116626954|ref|YP_829110.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
gi|116230116|gb|ABJ88825.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
Length = 289
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 96/277 (34%), Gaps = 41/277 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + I V G+ L AI + +V + + +L+PQG+I + ED
Sbjct: 15 IDLSKRGRIAVRGRDRARLLHAITSNEVKKMTPGSGCYAFLLSPQGRIQADLNLFCF-ED 73
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F+++ + R+ ++ + Y + V +E + + + +
Sbjct: 74 RFLIDTEPELREKVLPHIKKYIIADQVELEDVSAETAAIGLEGPSAATILATLGAPVPGT 133
Query: 124 D-------------------------------VLLHRTWGHNEKIASDIKTYHELRINHG 152
D R + +A+ RI +G
Sbjct: 134 DYSHVAWDDATIAAVTVTGQPGVRIFCPLEKAAAFVRQFESAGAMAASEDDVRLARIENG 193
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P + ++ +S TKGCYIGQE+V RI+ + + K+ +
Sbjct: 194 RPRYGEDI-RDTSLPQET--QQMHAVSFTKGCYIGQEIVERIRAQGRVNKKLTRVVLPGS 250
Query: 213 -LPPSGSPILTDDIEI----GTLGVVVGKK-ALAIAR 243
LP G D + L V G+ ALA R
Sbjct: 251 TLPAHGDKTTIDGADAEVTSAVLSPVSGEIVALAYVR 287
>gi|311743212|ref|ZP_07717019.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
gi|311313280|gb|EFQ83190.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
Length = 318
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 24/271 (8%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS++ + V G + +L A+ T +L LP +L+PQG+I F +
Sbjct: 46 TFVDLSHRDVVTVAGPDRLTWLHALTTQYLLDLPPGRPTDVLLLSPQGRIEHAFTGV-DD 104
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
TF + + L++ L + S V + + V+
Sbjct: 105 GATFTVHTEPGAGAPLVEFLDRMRFMSRVEVTLATDQWAVIGLPGLA------------- 151
Query: 122 IADVLLHRTWGHNEKIASD---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+V + D + LRI G D P++ + L + +
Sbjct: 152 -WEVRPRADLASLPAVLGDPVGSWAWEALRIEAGRPRIGLD-TDERAIPNELGL-LGSAV 208
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-DDIEIGTLGVVV 234
L KGCY GQE V+R+ +R + + LPP G+ +L +G +G
Sbjct: 209 HLDKGCYRGQETVARVHTLGRPPRRLVRLHLDGSVDHLPPVGTDLLDPAGTRVGAIGTSA 268
Query: 235 GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
L + V + + LT GV
Sbjct: 269 RHHELGPVALGVVKRNVDPTLVLTADGVPAS 299
>gi|223936903|ref|ZP_03628812.1| folate-binding protein YgfZ [bacterium Ellin514]
gi|223894472|gb|EEF60924.1| folate-binding protein YgfZ [bacterium Ellin514]
Length = 363
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 58/292 (19%), Positives = 102/292 (34%), Gaps = 55/292 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +S I + G + FL +T +V L +A++T +GK+ I + +D
Sbjct: 48 LSFRSRICLTGADRVRFLHGQVTNNVQGLRTGTGCYAALVTAKGKLQSDLNIYAL-KDEL 106
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVV-LSWNQEHTFSNSSFID------ 117
+L+ + + ++L Y + +V II++ G + + + S +D
Sbjct: 107 LLDFEPGLTKVVSERLEKYIIADDVQIIDVAAAYGQLSIQGPKSEAAIRSLGLDLEIPAQ 166
Query: 118 --------------------ER-----------FSIADVLLHRTWGHNEKIASDIKTYHE 146
R + + ++ +
Sbjct: 167 PLTLTSINNPNLGEIYLMNHPRTGGVGFDLFVPTPALGAVADKLIAAAKQQGGSAGGWTA 226
Query: 147 L---RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
L RI G+ D + + P IS +KGCYIGQEV++RI+ + K
Sbjct: 227 LERARIEAGLPRFGADMDETNLAPEAI---EARAISYSKGCYIGQEVIARIRTYGQVAKA 283
Query: 204 PMIITGTD---DLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDK 246
+ D LP G + D E+G + V G AL R +
Sbjct: 284 LRGLRLDDKLKTLPAKGDKLFHDGKEVGYITSAVSSSKLNGNFALGYVRKEA 335
>gi|166366232|ref|YP_001658505.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
gi|166088605|dbj|BAG03313.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
Length = 337
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 42/297 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ S+ +++ G+ + FL + + L + L G+ L F+ +
Sbjct: 33 LIDRSDWGLLELKGQDRLRFLHNQTSNAIDRLKPGQGCETIFLNSTGRTL-DFVTVYASD 91
Query: 63 DTFILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTF----------- 110
D+ ++ + +R L++ + Y V I N + + +
Sbjct: 92 DSLLILVSPQRRQFLLELIDRYIFPFDKVEISDLTDNFAIFTLIGTESGQYLQKIAIPEQ 151
Query: 111 -------SNSSFIDERFSIA------------------DVLLHRTWGHNEKIASDIKTYH 145
S+ D +A L N +D + +
Sbjct: 152 ILTGVQHSHYLLSDPPLRVAVGTGLDLPGYTLIVAAAEAGPLWENLIKNGVTPADEQVWE 211
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LRI+ G + + P +A + I KGCYIGQE ++R+ +++R
Sbjct: 212 YLRIHQGRPAVDRELT-EDYNPLEAGL--WRAIVFDKGCYIGQETIARLNTYKGVKQRLW 268
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
I + +P S +PI+ + ++G L V+ L + +K + +
Sbjct: 269 GIKLSQPVP-SNTPIILEAQKVGLLTSVLEDFGLGYVKTKAGGEGLKVQIGEATGEL 324
>gi|227547970|ref|ZP_03978019.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium lipophiloflavum DSM 44291]
gi|227079981|gb|EEI17944.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium lipophiloflavum DSM 44291]
Length = 377
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 28/269 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G A FL +++ ++ P A + L QG IL + +S +
Sbjct: 73 SHRKVIAVSGPDAPTFLNNLLSQKLVDAPEGFAASALDLDIQGHILHHADVSYANG-VYY 131
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----SI 122
L+ + ++LI L S V I + GV+ + ++ R
Sbjct: 132 LDTPAHQHETLIAFLTKMVFWSQVSINDTEL-GVLTVVGDAPAVAEAAVTRTRPWGETQR 190
Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA---- 170
DVL+ R + + + LR+ G + D PH+A
Sbjct: 191 TDVLVERGRVGEVVDKLRDQGVRLAGLMAFTALRVRAGEPELRADL-DEKSIPHEAPSLI 249
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIE 226
+ + L KGCY GQE V+R+++ + +++ P G+ I
Sbjct: 250 NRGPYVGAVHLAKGCYRGQETVARVENLGRSPRLLVMLHLDGSAPVDPVPGAAITLAGRG 309
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHA 250
+G LG V G ALA+ + ++ A
Sbjct: 310 VGRLGTVAHDADYGPIALALVKRSALNSA 338
>gi|296118897|ref|ZP_06837470.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM
20306]
gi|295967995|gb|EFG81247.1| folate-binding protein YgfZ [Corynebacterium ammoniagenes DSM
20306]
Length = 359
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 33/292 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I V G A FL +++ + T+ + + L QG+IL Y + + +D F
Sbjct: 45 SQRRVISVVGPDAPEFLNNLLSQKLDTVDPGYSAAALDLDIQGRILHYSDVVRT-DDGFY 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFI------ 116
L+ ++ +S L S V + + V L + ++F+
Sbjct: 104 LDTTAAEFESFFKFLTMMIFWSKVEVTEADLAIVSLLGTLPELPTKVQEAAAFVRKVENW 163
Query: 117 --DERFSIADVL-----LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTI---F 166
R IA + + + + Y R+ + + D +I
Sbjct: 164 TETPRTDIAVPREQLREMAQELIDAGFKPAGLMAYTAERVRNLEPERAADLDDKSIAHEI 223
Query: 167 PHDAL-MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILT 222
PH +L + L KGCY GQE ++R+++ + + + ++P +G+ I +
Sbjct: 224 PHWIGRGELQGAVHLEKGCYRGQETIARVENLGRSPRLVVRLYLDGSVPEMPETGADITS 283
Query: 223 DDIEIGTLGVVV-----GKKALAIAR---IDKVDHAIKKGMALTVHGVRVKA 266
+G +G ++ G AL + + + K D + L +
Sbjct: 284 GGRRVGRVGTIIDDFELGPIALGLIKRSALPKPDKPDSEAPELLIGECAATV 335
>gi|271962471|ref|YP_003336667.1| LigA [Streptosporangium roseum DSM 43021]
gi|270505646|gb|ACZ83924.1| LigA [Streptosporangium roseum DSM 43021]
Length = 328
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 103/272 (37%), Gaps = 13/272 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ ++V G + +L ++ + + L A + +L QG++ + + + +
Sbjct: 45 SNREVVRVSGPDRLSWLNSLSSQKLDDLKPGQATQTLLLDAQGRVEHHLTLV-DDGEAVW 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
++ L+ L + V + + V+S + + + DVL
Sbjct: 104 AHVEPGTSAELVAFLDKMRFMLRVEVADVTADYAVVSVADAARLTPPAGAVP--AGDDVL 161
Query: 127 LHRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
L R + + + Y LRI + PH+ + + L+KG
Sbjct: 162 LPRELLADRLGGLRLAGLWAYEALRIEGHRPRLGFE-TDHKTIPHEVGW-IGAALHLSKG 219
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
CY GQE V+R+ + +R + + D LP G+P++ D++E+G +G L
Sbjct: 220 CYKGQETVARVHNLGHPPRRLVFLHLDGSVDTLPKHGAPVVHDEVEVGFVGSSARHHELG 279
Query: 241 IARIDKVDHAIKKGMALTVHGVRV--KASFPH 270
+ V + L GV + P
Sbjct: 280 PIALAVVKRTVPVDATLQAEGVAATQEVIVPP 311
>gi|71064739|ref|YP_263466.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4]
gi|71037724|gb|AAZ18032.1| hypothetical protein Psyc_0159 [Psychrobacter arcticus 273-4]
Length = 255
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 41/275 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+++V L+ S + + G+ A FLQ +T +V L + +AI +G+I I K
Sbjct: 5 INAVTLAQFSQLSIQGEDAEKFLQGQLTCNVTKLGLSY-QAAAIGNLKGRIEFGIWIKKQ 63
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDER 119
E + + I ++L L + S PI V+ + TFS+
Sbjct: 64 AEKHYDVVISTDCAEALQGHLKKFGAFSKFDTSTPMPIYPCVI--DNVPTFSHQ------ 115
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHG----IVDPNTDFLPSTIFPHDALMDLL 175
+ + +I+ + + I G + +F P + +
Sbjct: 116 -------------DDYNTSENIQAWMQSSIATGNYWIVAATQGEFQ-----PQELRLHQR 157
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLG 231
G+ KGCY+GQEV++RI ++ + + GT P+ L + +
Sbjct: 158 GGMDYDKGCYLGQEVIARIYFKSAPKAFLHYVKGTSVKGSGTTPAAGEKLDKVQVVNAIT 217
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G +AL +AR +++ LT+ + +
Sbjct: 218 TSEGFEALVVARPEQLAE-----SGLTILDLPLAL 247
>gi|153005639|ref|YP_001379964.1| glycine cleavage T-protein barrel [Anaeromyxobacter sp. Fw109-5]
gi|152029212|gb|ABS26980.1| Glycine cleavage T-protein barrel [Anaeromyxobacter sp. Fw109-5]
Length = 316
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 96/282 (34%), Gaps = 30/282 (10%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
++ ++ GK A +L + T D+ L + + L+ +G ++ + ED +L+
Sbjct: 35 RAVLRATGKDAQDYLHRMSTQDLARLRPGESAYATFLSAKGHLVAEGHVLAR-EDGILLD 93
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL- 126
+D + L + V+ E + VV E + + E IA
Sbjct: 94 LDPRAQPDAQVHLERLVIMDEVVFEDLSEALRVVPVLGPEAARRLTGRVPEAPRIAHERR 153
Query: 127 ----------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
L +A D LRI + D ++ P +A
Sbjct: 154 GAPGADVLLPPHEAEALRAELLAEGAVALDEGELEALRILAAVPRFGADM-DASRLPMEA 212
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
+ IS +KGCYIGQEVV R R +++ + + P G+ + E+G +
Sbjct: 213 GLTRA-AISFSKGCYIGQEVVLRATARGHLQRGLVQLALPGGAGP-GTKLTAGGQEVGVV 270
Query: 231 GVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G+ L R K G + G
Sbjct: 271 TSAADTPEGRLGLGYLR----RAHWKPGAVVDAGGQPATVRR 308
>gi|108758208|ref|YP_634466.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
gi|108462088|gb|ABF87273.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
Length = 356
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 54/309 (17%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +++ G+ +L ++T +V LP A +A++T +G ++ I K E D +L+
Sbjct: 51 RETLRITGEDRASYLHGMVTQEVNNLPVGTAAYAAMVTVKGAMVADARILKREPD-LLLD 109
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------------------- 102
++ + + L Y + + + +L
Sbjct: 110 LEPGTGAKVREFLDKYLISEDAELHEATGELALLRLLGPRTEDVLSAALGSPHAPLSHHA 169
Query: 103 ----------SWNQEHTFSNSSFID---ERFSIADVL--LHRTWGHNEKIASDIKTYHEL 147
W T +D R + D L + + L
Sbjct: 170 ARTATLAGQEVWLLGSTAIEPHGVDVWVPRAGLEDAWRALSEAGAAHGLKPLGFEALELL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D + T P +A + N IS KGCYIGQEV++R R + ++ +
Sbjct: 230 RVEAGVPRYGQDMV-DTTIPLEANLA--NAISYNKGCYIGQEVIARATFRGHMNRKLTGL 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261
D G+ + + ++G L VV AL D ++ + + L
Sbjct: 287 LLGDADVAPGTELRRGEKKVGWLTSVVQSPVAGQRVALGYVHRDSLEPGTE--LTLAAGP 344
Query: 262 VRVK-ASFP 269
VK AS P
Sbjct: 345 ATVKVASLP 353
>gi|220913464|ref|YP_002488773.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6]
gi|219860342|gb|ACL40684.1| folate-binding protein YgfZ [Arthrobacter chlorophenolicus A6]
Length = 361
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 101/275 (36%), Gaps = 38/275 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L + + V L + +L+ QG+I I +
Sbjct: 44 VDLSSRGVVTVTGPDRLSWLNTLSSQQVTALQPGESSELLLLSVQGRIEFDARIV-DDGG 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERFS 121
T L ++ ++ L + L K V I + V+ S ++ D
Sbjct: 103 TAWLIVEGAEAAPLAEYLSRMKFMLRVDIADASADWAVVGSTAAVPDWASLVAWQDPWPH 162
Query: 122 IADVL-------------LHRTWGHNEKIASDIKTY------------HELRINHGIVDP 156
++ L R W A++++ LRI
Sbjct: 163 VSAGGYSYATVAEESHPGLERPWFEYLVPAAELEQTVADRPLAGVMSSEALRIAAWRPRI 222
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213
+ PH+ + L + L KGCY GQE ++R+ + +R + + L
Sbjct: 223 GAE-TDDRTIPHELDL-LRTAVHLAKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTL 280
Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
P +GS +L D ++GT+ V G ALA+ +
Sbjct: 281 PAAGSVVLAGDRKVGTVTSVAQHYEMGPVALAVIK 315
>gi|25029029|ref|NP_739083.1| hypothetical protein CE2473 [Corynebacterium efficiens YS-314]
gi|259505980|ref|ZP_05748882.1| aminomethyltransferase, gcvt-like protein [Corynebacterium
efficiens YS-314]
gi|23494316|dbj|BAC19283.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166461|gb|EEW51015.1| aminomethyltransferase, gcvt-like protein [Corynebacterium
efficiens YS-314]
Length = 421
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 35/285 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ I+V G A FL I++ V + L QG+I +++ + + F
Sbjct: 122 SNRKVIRVDGPDAPAFLNNILSQKVDAAEDGFTARALDLDAQGRIQHTMMVT-VADGVFY 180
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---IDERFSI- 122
L+ ++ DSLI L S V +E + + L E +F +D
Sbjct: 181 LDTSATEFDSLIAYLRKMIFWSEVTVEEADLAIITLIGR-EIPLPEVTFRRTVDWNGPKR 239
Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA---- 170
DV + R + + Y R+ + L + PH+
Sbjct: 240 VDVAVPRASFESGVDKLLDAGAELTGLMAYWAERVKALEPETPD--LDAKTIPHEIPHWI 297
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS---GSPILTDDIE 226
+ L + LTKGCY GQE V+R+ + + +++ P + G+ I +
Sbjct: 298 GRDEHLGAVHLTKGCYRGQETVARVDNLGRSPRVMVLLHLDGSAPVAPVTGAEITSGTRT 357
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G LG V+ G AL + + +D LT+ V V
Sbjct: 358 VGRLGTVIHDCDLGPIALGLVKRSALDAD------LTIGDVAVTV 396
>gi|172038986|ref|YP_001805487.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
gi|171700440|gb|ACB53421.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
Length = 368
Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 54/301 (17%), Positives = 109/301 (36%), Gaps = 53/301 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ + FL T D+ L + + G+ L + + + ED+ +
Sbjct: 58 SHWGLLQLTGEDRLRFLHNQTTNDINRLQCGQLCDTVFVNSTGRTL-DLVTTYVTEDSIL 116
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + ++R L + + Y V I + + + + D I
Sbjct: 117 LLVSPNRRRFLYEWMDRYIFPMDKVEIRDISEQNAIFTIIGKEAAKKLNQWDIAAQILSE 176
Query: 126 LLHRTWGH-------------------------NEKIASDIKT--------------YHE 146
L R +G E +A + + +
Sbjct: 177 LSPRKYGLLTVEEKNIMIGYDTGLNLSGYTLIVPENLAKTVWETVINLGIIPIGDRVWQQ 236
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + P +A + + IS KGCYIGQE ++R+ +++R
Sbjct: 237 LRIKQGRPYPDQELT-EDYNPLEAGL--WSSISFDKGCYIGQETIARLNTYQGVKQRLWG 293
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262
+ T + +G+ ++ DD ++G L + LA + A +G+ +T+
Sbjct: 294 VKLTQPV-KAGNTVMVDDKKVGILTSSIQLEEECLGLAYVKT----KAGGEGLKVTIGDA 348
Query: 263 R 263
+
Sbjct: 349 K 349
>gi|297623936|ref|YP_003705370.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093]
gi|297165116|gb|ADI14827.1| folate-binding protein YgfZ [Truepera radiovictrix DSM 17093]
Length = 348
Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 105/290 (36%), Gaps = 37/290 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G + FL ++ +V L AR + +L +G L + + E+D F+ ++
Sbjct: 49 LRLTGADRLEFLHGQVSNEVKRLGVGDARAALMLNVRGHALALMRLYRREDDLFVA-VEG 107
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSS-FIDER 119
+ + +L + + V + G VL + F+
Sbjct: 108 GAGERVEAQLGAHIIFDQVELHNLTGTLQSLTLQGEAAGEVLQRALHAELPEADRFVQVP 167
Query: 120 FSIADVLLHRTWGHNEK------IASDIKTYHELRINHG---IVDPNTDFLP-------- 162
F A VL+ R + D + E G + +
Sbjct: 168 FEGAKVLVSRVARSAPGGFDLHVLTQDARALVEALEGAGAKLVGERALAAARVAAGIAEA 227
Query: 163 -----STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+ P +A ++ +S KGCY+GQE+++RI+ R +R+R + + P
Sbjct: 228 ALEGGEGVLPQEAGLEY--AVSYRKGCYLGQEIMARIEARGNVRRRLVGLRLESVPPEGA 285
Query: 218 SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+L + +G LG V L + V H + G L V GV +
Sbjct: 286 RELLAEGKVVGRLGTVAEHPQLGTVALASVRHEVGAGAPLLVGGVSATVA 335
>gi|19553777|ref|NP_601779.1| aminomethyltransferase related to GcvT [Corynebacterium glutamicum
ATCC 13032]
Length = 373
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 64/287 (22%), Positives = 109/287 (37%), Gaps = 34/287 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 74 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 132
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119
L+ ++ D+LI L S V ++ + + L QE ++ F R
Sbjct: 133 LDTSAAEFDTLIGFLTKMIFWSEVTVQEADLAIITL-LGQEIALPDAVFARRVDWNGPSR 191
Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170
+A + G ++ + + K Y R+ D PH+
Sbjct: 192 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 250
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226
+ L + LTKGCY GQE V+R+ + + +++ P +G+ I
Sbjct: 251 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 310
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+G LG VV G AL + + +D L + V V
Sbjct: 311 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 351
>gi|308814228|ref|XP_003084419.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri]
gi|116056304|emb|CAL56687.1| aminomethyltransferase, putative (ISS) [Ostreococcus tauri]
Length = 248
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFILEIDRSKRDSL--- 77
+T DV A A LTP GKI++ ++ ++ D ++L++D +K D +
Sbjct: 1 MTCDVAR--CGRATYGAALTPNGKIVVDAFVAALDGDATRGTGEYVLDVDAAKMDEVRCR 58
Query: 78 --IDKLLFYKLRSNVIIEIQ-PINGVVLSWNQEHTFSNSSFIDERFSIAD--VLLHRTWG 132
+ L LR ++E VV+S E + D R A L R
Sbjct: 59 RTMKWLRRMSLRKRCVVEDAREAFDVVVSTRAEDGLA----PDPRSRTASGVALGFRGVA 114
Query: 133 HNEKIAS--DIKTYHE-LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
A+ D H RI G+ + + FP + D L+ +S +KGCY+GQE
Sbjct: 115 AKSSSAAREDATFLHASHRIALGVGEGYEEL--GGTFPLECNFDALDAVSFSKGCYVGQE 172
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPS------GSPILTD-DIEIGTL-GVVVGKKALAI 241
+R + R +RKR + + + G ++ + +G + V G +AL
Sbjct: 173 NTARQRFRGAVRKRVAPVVLREGVGRERARELIGQSVVNERGDRVGEVIASVDGARALVR 232
Query: 242 ARIDKVDHAI 251
AR+ + A+
Sbjct: 233 ARVQFLRDAL 242
>gi|62391419|ref|YP_226821.1| aminomethyltransferase, GCVT-like protein [Corynebacterium
glutamicum ATCC 13032]
gi|21325353|dbj|BAB99974.1| Predicted aminomethyltransferase related to GcvT [Corynebacterium
glutamicum ATCC 13032]
gi|41326760|emb|CAF21242.1| PUTATIVE AMINOMETHYLTRANSFERASE, GCVT HOMOLOG [Corynebacterium
glutamicum ATCC 13032]
Length = 367
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 64/287 (22%), Positives = 109/287 (37%), Gaps = 34/287 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ IKV G A FL I++ V ++ G+ L QG+I ++ ++ F
Sbjct: 68 SNRKVIKVEGPDAPTFLNNILSQKVDSVENGFTAGALDLDAQGRIQHTMQVTVVDG-VFY 126
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-------DER 119
L+ ++ D+LI L S V ++ + + L QE ++ F R
Sbjct: 127 LDTSAAEFDTLIGFLTKMIFWSEVTVQEADLAIITL-LGQEIALPDAVFARRVDWNGPSR 185
Query: 120 FSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIVDPNTDFLPSTIFPHDA---- 170
+A + G ++ + + K Y R+ D PH+
Sbjct: 186 IDVAIRRENLEEGVDKLLEAGAKLTGLMAYTAERVKALEPAAGVDL-DDKTIPHEIPHWI 244
Query: 171 -LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226
+ L + LTKGCY GQE V+R+ + + +++ P +G+ I
Sbjct: 245 GRGEHLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHLDGSAPLDPVTGAEIKAGART 304
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+G LG VV G AL + + +D L + V V
Sbjct: 305 VGRLGTVVHDADYGPIALGLVKRSALDK------ELHIDDVSVNVDR 345
>gi|241668459|ref|ZP_04756037.1| hypothetical protein FphipA2_06811 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876992|ref|ZP_05249702.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843013|gb|EET21427.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 248
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 21/226 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G I FLQ ++T+D+ L + +G+I+ + +
Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLSDDNNLLMTTFANLKGRIISLCFVKYVSSQKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L ++++ D+L+ L Y + S V + + F+++ F++ + D
Sbjct: 66 LLSVEQTVIDNLLSWLKKYGMFSKVSFAVNEDYSLF--------FTDNGFLNHDILVKDA 117
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTKGC 184
L ++ E+I I ++L I I N + P + +D + +S TKGC
Sbjct: 118 L--KSEISYEQIQK-INILNKLAI---IDQANVE----KFLPAELDLDNIEKVVSYTKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
Y+GQEV++R+ ++ ++K ++ ++ +D + +
Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLK-TSDGKPLANV 212
>gi|297193546|ref|ZP_06910944.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718178|gb|EDY62086.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 323
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 104/283 (36%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G+ + +L ++T V L A + IL+ G I + + +
Sbjct: 44 VDLSHRGVVTVSGEERLSWLHLLLTQHVTDLSPGQATEALILSAHGHIEHALYLV-DDGE 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ R++LI L K + + + V+ + E
Sbjct: 103 TVWAHVEPGTREALIGYLESMKFFYKAEVADRTDDFAVVHLPAGSIAEVPEGVVVRETAH 162
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R +G A I Y LR+ + PH+ + +
Sbjct: 163 GRDLFLPRADLESFGAAAGPAVGILAYEALRVESHRPRLGFE-TDHRTIPHELGW-IGSA 220
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LPP G+P+ + ++G
Sbjct: 221 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPPGTPVRLASEGAEGRQLGF 280
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 281 VTTSARHYELGPIALALVKRNVPVDAELLAGDTAAAQETVVEP 323
>gi|188997079|ref|YP_001931330.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932146|gb|ACD66776.1| folate-binding protein YgfZ [Sulfurihydrogenibium sp. YO3AOP1]
Length = 302
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSA-----------IPFLQAIITADVLTLPYKIARGSAILTPQG 49
M+ + L ++ I V GK + FLQ I+T +V L K + +L +G
Sbjct: 1 MNWIKLK-RNKILVKGKQSKLNLKGIKEEHTAFLQGILTNNVAQLNDKEFNYNLMLDHKG 59
Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+ F + K E+ +IL+ + RD +++KL KL V E+ + +
Sbjct: 60 SPIWDFYVFKDNEN-YILDFEFD-RDEVLNKLKQLKLSYQVFFEVLEFEHIYIFGEDSEK 117
Query: 110 FSNSSF----------------IDERFSIADVLLHRTWGHNEKIAS--------DIKTYH 145
F +F I +G+ E I S D + +
Sbjct: 118 FIQQTFKEAPEKFKYLKSGDIYIANNPLRLGQKGFDIFGNLESIKSNLPTDLKIDEEEFE 177
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LRIN+ I + + + + + ISL KGCY+GQE ++R+ R R M
Sbjct: 178 NLRINNCIPKIGKELI-EKVLTLETNI-WKYAISLNKGCYVGQEAIARVYFRGKPP-RVM 234
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK 246
+ D++ +L +D +G + V K AI I +
Sbjct: 235 VKFSFDNILNENEKVLLNDKPVGFITSVNIKDKTAIGFILR 275
>gi|227506375|ref|ZP_03936424.1| glycine cleavage T protein [Corynebacterium striatum ATCC 6940]
gi|227197026|gb|EEI77074.1| glycine cleavage T protein [Corynebacterium striatum ATCC 6940]
Length = 352
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 104/286 (36%), Gaps = 32/286 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + IKV G A FL +++ + + G+ L QG +L +S++ ED F
Sbjct: 51 SQRRVIKVAGPEAATFLNNLLSQKLDDVSSGFHAGALDLDIQGHVLHQIDLSRV-EDAFY 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----IDERFSI 122
L++ ++ DSL+ L S V +E + V + + +++ +
Sbjct: 110 LDVPAAQFDSLLSFLTKMIFWSQVTVEEADLAVVTVLGGELPAPADAVLSREVVWRGPHR 169
Query: 123 ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
D L+ R+ + + R+ + D H+ +
Sbjct: 170 TDHLIPRSRLAEAVAELEAAGGTLVGLMAFTAERVRALEPELAADL-DDKAIAHEVPHWI 228
Query: 175 LNG-----ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTDDIE 226
+ L KGCY GQE V+R+++ + +++ P G +
Sbjct: 229 RRSQGPAFVHLDKGCYRGQETVARVENLGRSPRLLVMLYLDGSAPNRPAIGDEVTLGGRR 288
Query: 227 IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+G LG +V G ALA+ + + G LT+ V
Sbjct: 289 VGRLGTIVDDCDYGPIALALIKRSALT-----GGTLTIGDVAASVE 329
>gi|311897747|dbj|BAJ30155.1| hypothetical protein KSE_43720 [Kitasatospora setae KM-6054]
Length = 318
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 97/272 (35%), Gaps = 16/272 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ I V G + +L ++T V LP + A + +L+P G + + + +
Sbjct: 42 TDLSHRGVITVTGPDRLSWLHLLLTQHVSELPPQQATEALVLSPNGHVEHALYLV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--NSSFIDERFS 121
T + ++ +L+ L K + V + V+ T ++ + E
Sbjct: 101 TSWIHVEPGDAPALVTYLESMKFWNRVEVADATERYAVVFLPAGSTAPVERAAAVRELPW 160
Query: 122 IADVLLHRTWGHNE----KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN- 176
D+ L R A+ I Y LR+ + PH+ D L
Sbjct: 161 GRDLFLPRAELAAAVADFGPAAGIWAYEALRVEGHRPRLGFE-TDHRTIPHEV--DWLGS 217
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDD--IEIGTLG 231
+ L KGCY GQE V+R+ + +R + + LP G+ + + +G +
Sbjct: 218 AVHLQKGCYRGQETVARVHNLGRPPRRLVFLHLDGTAEKLPAHGTEVRVEGQERPVGFVT 277
Query: 232 VVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
L + V L GV
Sbjct: 278 SAARHHELGPIALALVKRNTPVDAVLLADGVP 309
>gi|227502135|ref|ZP_03932184.1| glycine cleavage T protein [Corynebacterium accolens ATCC 49725]
gi|227077119|gb|EEI15082.1| glycine cleavage T protein [Corynebacterium accolens ATCC 49725]
Length = 444
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 100/275 (36%), Gaps = 29/275 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ S + ++V G A FL ++T + P + G+ L QG IL + I++ E
Sbjct: 137 AIDRSQRRVLRVSGADAPGFLNNLLTQKLDDAPSGFSAGALDLDIQGHILHHMDITRESE 196
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D F L++ ++ +S D L S V +E I V L + +
Sbjct: 197 D-FYLDLPAAQFESAQDFLTKMVFWSEVTVEEADIAIVTLLGEADIPTPPTVVFSREVQW 255
Query: 123 ADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPSTIFPHD 169
+ EK+ + + R+ + D PH+
Sbjct: 256 PGIKRVDLAVPREKLVESMAALEAEGARLAGLMAFTAERVRAREPELAADL-DKKSIPHE 314
Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220
+ + L KGCY GQE V+R+++ + +++ P G I
Sbjct: 315 VPQWISRSDADPAHVHLNKGCYRGQETVARVENLGRSPRLLVLLHLDGSAPERPNVGDDI 374
Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
+ ++G +G +V G AL + + +D
Sbjct: 375 SFNGRKVGRIGTIVDDCDFGPIALGLVKRSALDAG 409
>gi|94676520|ref|YP_588618.1| putative global regulator [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|118577990|sp|Q1LTU6|YGFZ_BAUCH RecName: Full=tRNA-modifying protein ygfZ
gi|94219670|gb|ABF13829.1| glycine cleavage T-protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 325
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 31/248 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + I GK A+ +LQ + DV +L + +GK+
Sbjct: 20 LTLISLEEWALITFNGKDAVKYLQDQLACDVTSLKNNEYTFTVHCNTKGKVYSNVYFLHY 79
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII--------------EIQPINGVVLS--- 103
+ D F L +S + ++ Y + V I +++ I + +
Sbjct: 80 Q-DGFALITRKSVYANELNIFKKYAIFYTVNINFHQNKILLGIAGLQVKDILSNIFTTIP 138
Query: 104 -------WNQEHTFSNSSFIDERFSIADV-----LLHRTWGHNEKIASDIKTYHELRINH 151
+ T +RF + L+ + + ++ K + L I
Sbjct: 139 NRLCPVIHTMDTTILYLHQPADRFLLITTNNIQNLILKKLTKYKIQTNNSKQWLALDIAA 198
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G + + P ++ L GIS KGCY+GQE ++R ++ N+ +K ++G
Sbjct: 199 GYPIIDQ-INSELLLPQALNIEALGGISFNKGCYLGQEAIARTKYHNMNKKELCFLSGKA 257
Query: 212 DLPPSGSP 219
+ P+ S
Sbjct: 258 NRIPTASE 265
>gi|332992341|gb|AEF02396.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
sp. SN2]
Length = 337
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 35/240 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60
++ L++ IK+ G+ A +L +T ++ L R A +GK + +
Sbjct: 15 AIKLNDNMLIKLEGEQADSYLHGQVTVNINALDENTVRYCAHCDNKGKTWSISFVGRHGN 74
Query: 61 --EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------H 108
+ + ++ + +L Y + S V I + +
Sbjct: 75 GRHGNAIFMLTNKDSGAHSLAQLNKYGVFSKVDITDESNQYTQFFLGENLGQMLLSSYFD 134
Query: 109 TFSNSSFI-------------DERFSIADVLLHRTWGHNEKIASDI-------KTYHELR 148
T + +R VL E+ D Y +
Sbjct: 135 TLPSEPLTSVHSDVGWVFKSDTQRAGYYVVLNSERAPEFEQKVKDTNGSIFEQNVYDAIM 194
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I I + S P + LNGI KGCY+GQEVV+R + ++ +
Sbjct: 195 IESAIP-SIEETGVSEYVPQMMNVQALNGIDFDKGCYMGQEVVARTRFLGKNKRAAYSFS 253
>gi|86159270|ref|YP_466055.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775781|gb|ABC82618.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
Length = 304
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 26/258 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++F++V GK A +L + T D+ L A +A L +G +L + E + ++
Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGEAAYAAFLNAKGHLLGEGHVLVREGE-ILV 79
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS--------FIDER 119
E+D + L + +V E L + + R
Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPARLAGRAGAAPVVPSAR 139
Query: 120 FSIADVLLHRTWGHNEKIAS----------DIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
V + G E + + D+ LRI G+ D ++ P +
Sbjct: 140 RGAPCVDVWAPAGEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
A + IS TKGCYIGQEVV R R +++ + + P G+P++ E+G
Sbjct: 199 AGLTRA-AISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPGAGP-GTPLVAGGQEVGA 256
Query: 230 LGVVV----GKKALAIAR 243
+ G+ L R
Sbjct: 257 VTSAAETPEGRLGLGYLR 274
>gi|167627906|ref|YP_001678406.1| hypothetical protein Fphi_1680 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597907|gb|ABZ87905.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 248
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 21/226 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G I FLQ ++T+D+ L + +G+I+ + +
Sbjct: 6 NNFKILEVSGIDTIKFLQGLVTSDLTKLSDDNNLLMTTFANLKGRIISLCFVKYVSSQKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L ++++ D+L+ L Y + S V + + F+++ F++ + D
Sbjct: 66 LLSVEQTVIDNLLSWLKKYGMFSKVSFAVNEDYSLF--------FTDNGFLNHDILVKDA 117
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTKGC 184
L ++ E+I I ++L I I N + P + +D + +S TKGC
Sbjct: 118 L--KSEIAYEQIQK-INILNKLVI---IDQANVE----KFLPAELDLDNIEKVVSYTKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTL 230
Y+GQEV++R+ ++ ++K ++ ++ +D + +
Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSDTNIQDFDLK-TSDGKPLANV 212
>gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
Length = 362
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 43/300 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G+ + +L ++T V LP + +L G++L + +++ + DT
Sbjct: 44 SHRGVLAVPGEDRLSWLHLLLTQHVSELPGDTGTEALVLDINGRVLHHMVVAHVG-DTVW 102
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---FSNSSFIDER---- 119
L+++ L+ L S V VLS T + +
Sbjct: 103 LDVEPDDAAELLGYLTKMVFWSKVEPRDATDELAVLSVVGPDTPTVLAAAGVPVPDGVGA 162
Query: 120 FSIADVLLHRTWGHNEKIASDI------------------------KTYHELRINHGIVD 155
++A R K A+D+ + LR+
Sbjct: 163 LALAGGGFVRRMPWPGKDAADVVVPRAERDAWFARLTAAGARAAGTMAFEALRVEALRPR 222
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GTDD 212
D PH+ + + + LTKGCY GQE V+R+ + +R +++ G ++
Sbjct: 223 LRVD-TDERTIPHEVGW-IGSAVHLTKGCYRGQETVARVANLGRPPRRLVLLHLDAGDEE 280
Query: 213 LPPSGSPILTDDIEIGTLGVV-----VGKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
LP G P++ +G +G V +G ALA+ R VD + G+ R+
Sbjct: 281 LPRPGDPVVNGGRPVGRVGTVTLHHELGAVALALVKRSVPVDAELVAGVDERAAPARIDP 340
>gi|311087326|gb|ADP67406.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 319
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L S V G + +LQ +T D+ L A G++ +
Sbjct: 19 LTMILLEEWSLTYVEGIDSKKYLQGQLTIDINLLLKTHHTLCAHCNFNGRVWSTMHLFHY 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI--- 116
E+ ++ +S I ++ Y + S + I E+ I + + +F +S F+
Sbjct: 79 EKGYAYIQ-RKSVSQIQIKEICKYSIFSKIKIRELNSICLIGFAGCNVRSFLSSLFVKIP 137
Query: 117 --------------------DERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
ERF D L + + ++ K + L I G
Sbjct: 138 NQSCPVIHEDNKTILWYEKPSERFLLVLPFLDFLTLKRKINQNIFLNNSKQWLLLDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P + L IS KGCY GQE ++RI + + + T
Sbjct: 198 LPVIDK-ICSNKFTPQAINLHNLKAISFKKGCYYGQETIARIFFKKTNKYFLCFLVSTGS 256
Query: 213 L-PPSG----SPILTDDIEIGTLGVVV 234
+ P G + + ++ ++G L +V
Sbjct: 257 IFPKIGSFIETKVDSEWFKVGVLLSIV 283
>gi|15617034|ref|NP_240247.1| hypothetical protein BU435 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681786|ref|YP_002468172.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682341|ref|YP_002468725.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471488|ref|ZP_05635487.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387298|sp|P57510|YGFZ_BUCAI RecName: Full=tRNA-modifying protein ygfZ
gi|25403621|pir||E84980 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10039099|dbj|BAB13133.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219622074|gb|ACL30230.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624629|gb|ACL30784.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086166|gb|ADP66248.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086738|gb|ADP66819.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087833|gb|ADP67912.1| folate-binding protein (YgfZ) [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 319
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 35/267 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L S V G + +LQ +T D+ L A G++ +
Sbjct: 19 LTMILLEEWSLTYVEGIDSKKYLQGQLTIDINLLLKTHHTLCAHCNFNGRVWSTMHLFHY 78
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFI--- 116
E+ ++ +S I ++ Y + S + I E+ I + + +F +S F+
Sbjct: 79 EKGYAYIQ-RKSVSQIQIKEICKYSIFSKIKIRELNSICLIGFAGCNVRSFLSSLFVKIP 137
Query: 117 --------------------DERF----SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
ERF D L + + ++ K + L I G
Sbjct: 138 NQSCPVIHEDNKTILWYEKPSERFLLVLPFLDFLTLKRKINQNIFLNNSKQWLLLDIEAG 197
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + + P + L IS KGCY GQE ++RI + + + T
Sbjct: 198 LPVIDK-ICSNKFTPQAINLHNLKAISFKKGCYYGQETIARIFFKKTNKYFLCFLVSTGS 256
Query: 213 L-PPSG----SPILTDDIEIGTLGVVV 234
+ P G + + ++ ++G L +V
Sbjct: 257 IFPKIGSFIETKVDSEWFKVGVLLSIV 283
>gi|256087633|ref|XP_002579970.1| hypothetical protein [Schistosoma mansoni]
gi|238665470|emb|CAZ36209.1| expressed protein [Schistosoma mansoni]
Length = 347
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 42/201 (20%)
Query: 47 PQGKILLYFLISKIE-----EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------ 95
P+G++L I + +++E+D S +L+ L Y LR V I+
Sbjct: 18 PRGRVLTDAFIYHTNRLSANQSDYLVEVDVSCVPNLVKHLKQYNLRGKVKIDADLSVYPW 77
Query: 96 -------------------PINGVVLSWNQEHTFSNSSFIDER---------FSIADVLL 127
P+N + +S ++ F S D R S ++ +
Sbjct: 78 VAMPTSRHSNQLNNYEAWSPVNSLDISDQKQLIFFAS---DPRGISGWSGRILSTSNTNV 134
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+ DI YH R G+ + +F+ S P +A DL G+S +KGCYIG
Sbjct: 135 TSIFPSCNTKPLDINLYHNARWELGLPEGIKEFITSDTLPFEANADLSGGVSFSKGCYIG 194
Query: 188 QEVVSRIQHRNIIRKRPMIIT 208
QE+ +R +IR+R + I
Sbjct: 195 QELTARTHFTGVIRRRYVPIK 215
>gi|225874893|ref|YP_002756352.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
gi|225791236|gb|ACO31326.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
Length = 371
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 59/298 (19%), Positives = 111/298 (37%), Gaps = 50/298 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+++S + + G +L +IT + LP + S +L QG+IL + D
Sbjct: 47 LAHRSLLSIRGGDQQRWLNGMITNTIKDLPAGHSNYSYVLNAQGRILGDLTACRFP-DHI 105
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSS---------- 114
+L D ++ L + + + +V +E +Q + L+ + +
Sbjct: 106 LLVTDETQVAGLAEHFDHFIIMDDVELEKVQGRAAIGLAGPEAALLLERAGLPLPEGPLT 165
Query: 115 FID-ERFSIADVLLHRTWGH-----------------------NEKIASDIKTYHELRIN 150
F+D VL+ + +G + + LR+
Sbjct: 166 FVDAPDLGSQPVLILQEYGPVVPRFTLWMAEADAPAFWDRLAVAGMMPAGADALEMLRLL 225
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ DF P + D + KGCY+GQE+V RI+ R + ++ ++ T
Sbjct: 226 EGVPQYGVDF-SEKYLPQEV--DGSRPLHFNKGCYLGQEIVERIRSRATVHRQLRVVELT 282
Query: 211 DDLPPSGSPILTDD-IEIGTLGVVV---GK---KALAIARIDKVDHAIKKGMALTVHG 261
LP +P+ + IG + G LA+ R + A+++ LT G
Sbjct: 283 GTLPALPAPVEVGEAQAIGEITSAAALPGGPRLLGLAMLR----NEAMERQQTLTYEG 336
>gi|320163245|gb|EFW40144.1| hypothetical protein CAOG_00669 [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 70/273 (25%)
Query: 4 VYLSN--------QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55
V LS+ + +++ G A +Q + D+ + +A+L G++L
Sbjct: 113 VPLSHTSAAAAGRRRILRISGPEAADVVQNLTANDIT-ITPHPVVFTAMLNHLGRVLADA 171
Query: 56 LISK----------IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--- 102
+ E F+L++D+ LI+ L + ++V ++ ++
Sbjct: 172 FVFTFPPATKANSITSETEFLLDVDQETSVQLIEALQPFVRLADVDLDTNVAEWQLVQVF 231
Query: 103 ---SWNQEHTFSNSSFI--------------------DERFSIAD-------------VL 126
+W+ T + D R +
Sbjct: 232 TPPAWSASQTIDWLHQVQNTTSSDASAKARAHVLGGWDPRLVRPQNYLDTQIDQVGSSMG 291
Query: 127 LHRTWGHNEKIASDIKTY------------HELRINHGIVDPNTDFLPSTIFPHDALMDL 174
L + + +D + + R G+ + + F +T FP ++ +
Sbjct: 292 LRLLLSASHPLVADSARWATLGRLGSLGEYDDRRYALGLAEGVSGFRFATSFPLESNFER 351
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
LNG+ KGCY+GQE+ R R + RKR +
Sbjct: 352 LNGVHFNKGCYLGQELTHRSHSRGVTRKRILPF 384
>gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
Length = 369
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 102/286 (35%), Gaps = 28/286 (9%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + +N+ + V G+ + +L + + + L + + L+P G + + +++ +
Sbjct: 54 ALIDHTNRDVLAVTGEDRLTWLHTLSSQHLTDLADGASTEALFLSPNGHVEHHAVLTH-Q 112
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------- 110
+ L+ + +L+ L + S V + + + L+
Sbjct: 113 DGVVYLDTEPGAGAALLAFLDGMRFWSKVEVAPADLAVLALAGPTAADVAGRARNAEPGR 172
Query: 111 --SNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDF 160
+ F D++L R + + LRI D
Sbjct: 173 SGPDGGFTRRSAEGLDLVLPRAAVGAVAQELRAAGAVPAGSWAADALRIPTRRPRWGVD- 231
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSG 217
P++ L + L KGCY GQE V+R+ + +R +++ LP G
Sbjct: 232 TDEKTIPNEVSW-LSTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLNLDGSVGTLPEPG 290
Query: 218 SPILTD-DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
P+ + +G LG + L + + +++ G L V G+
Sbjct: 291 EPVTSGAGRAVGRLGTIAQHHELGPIALALIKRSVEAGTPLLVGGI 336
>gi|220918129|ref|YP_002493433.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955983|gb|ACL66367.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
Length = 304
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 26/258 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++F++V GK A +L + T D+ L + +A L +G +L + E + ++
Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGE-VLV 79
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF-----SNSSFIDE--- 118
E+D + L + +V E + + E + S+ +
Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPEGPAKLGGRAGSAPVVPTAR 139
Query: 119 ---------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+ L + D+ LRI G+ D ++ P +
Sbjct: 140 RGAPCMDVWAPAAEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
A + IS TKGCYIGQEVV R R +++ + + P G+P++ E+G
Sbjct: 199 AGLTRA-AISFTKGCYIGQEVVLRATARGHLQRGLVQLELPPGARP-GTPLVAGGQEVGA 256
Query: 230 LGVVV----GKKALAIAR 243
+ V G+ L R
Sbjct: 257 VTSVAETPEGRLGLGYLR 274
>gi|317126054|ref|YP_004100166.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043]
gi|315590142|gb|ADU49439.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043]
Length = 357
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 42/298 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V LS++S + V G + +L ++ T +L L + +R + ILTP+G + +
Sbjct: 60 LAVVDLSHRSVLTVTGPDRLSWLHSLTTQHLLGLGVRQSREALILTPKGHVEHSLHLV-D 118
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ T + + +SL L + V + + VL + + R
Sbjct: 119 DGATTWITTEPGAGESLRAWLDRMRFMLRVEVADVTADWAVLGEPHSAESAEGEPLAWRD 178
Query: 121 SIADVLLHRTW--------------------------GHNEKIASDIKTYHELRINHGIV 154
D++ T ++ + + LRI
Sbjct: 179 PWPDLVGDTTAYGPVEGHPGRQWSWREVIVPRASLEEAVADRPLAGLWAADALRIAAWRP 238
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212
+ H+ L + L KGCY GQE V+R+ + +R + +
Sbjct: 239 QLGAE-TDHRTIVHEVDW-LRTAVHLHKGCYRGQETVARVHNLGRPPRRIVFLHVDGSGH 296
Query: 213 -LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
LP G+ + D +G L V G ALA+ + L V V
Sbjct: 297 VLPAPGAEVRAGDRVVGHLTSVGRHHTDGPIALAVIK-----RNTDPEAVLLVGDVTA 349
>gi|197123340|ref|YP_002135291.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
gi|196173189|gb|ACG74162.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
Length = 304
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 94/258 (36%), Gaps = 26/258 (10%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++F++V GK A +L + T D+ L + +A L +G +L + E + ++
Sbjct: 21 ERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHLLGEGHVLAREGE-ILV 79
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA- 123
E+D + L + +V E VL + + A
Sbjct: 80 ELDPAAAPETRALLEKLVIMDDVTFEDLSATLRALPVLGPDGPARLGGRAGSAPVVPTAR 139
Query: 124 --------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
L + D+ LRI G+ D ++ P +
Sbjct: 140 RGAPCVDVWAPAAEAEALRAALVADGAAPLDLAELESLRILAGVARFGADM-DASRLPME 198
Query: 170 ALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
A + IS +KGCYIGQEVV R R +++ + + P G+P++ E+G
Sbjct: 199 AGLTRA-AISFSKGCYIGQEVVLRATARGHLQRGLVQLELPPGAGP-GTPLVAGGQEVGA 256
Query: 230 LGVVV----GKKALAIAR 243
+ V G+ L R
Sbjct: 257 VTSVAETPEGRLGLGYLR 274
>gi|126642848|ref|YP_001085832.1| hypothetical protein A1S_2824 [Acinetobacter baumannii ATCC 17978]
Length = 217
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 26/217 (11%)
Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86
+T D L R +AI +G+I + K ++F + + + + + + Y
Sbjct: 1 MTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAESFDIIVTQDQAEEFAKHIKKYGA 60
Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
S + + Q V HT +S+ +DI + +
Sbjct: 61 FSKMTLSEQG--AVFPKVVNGHTEFSST-----------------------ETDISEWQK 95
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
I G P + + G++ KGCY+GQE+V+R+ + + +
Sbjct: 96 QAIVTGQA-WIAQATEHEFQPQELRLHQREGVNYDKGCYLGQEIVARLWFKAKPKHWLHL 154
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
+ GT D P + + D + + G AL +A+
Sbjct: 155 VQGTGDAPAPATQLHNDVEVVNSTQTTDGYIALVVAK 191
>gi|317509404|ref|ZP_07967023.1| aminomethyltransferase folate-binding domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
gi|316252327|gb|EFV11778.1| aminomethyltransferase folate-binding domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
Length = 323
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/277 (22%), Positives = 96/277 (34%), Gaps = 17/277 (6%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
++V SN I++ G + +L I+T V LP + IL GK+ + + +
Sbjct: 20 AAVDRSNLDVIRLTGPERLDWLNKIVTQKVDELPAASQTQALILDAHGKVEHHMRVFETG 79
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
EDT L + K L+D L + V+ E P V+ ++ Q F + E F
Sbjct: 80 EDTTWLVTEPGKGAPLLDYLRKMVFWAKVVPEAAPDRKVIATFEQGKRF-EAVHPSESFE 138
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL--------MD 173
L T G LR+ D PH+ +
Sbjct: 139 EVWATLTSTRGFRP---VGTWADEALRVAALEPRLGLD-TDERTLPHEVGWVNPRGAELA 194
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTD-DIEIGT 229
+ L KGCY GQE VS+I + + ++ + G I + +G
Sbjct: 195 EWKAVHLNKGCYRGQETVSKIANVGRPPRSLALLHFDGEDAQDLRPGESIADEQGSVVGR 254
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
LG V L + V + L V G +
Sbjct: 255 LGTAVTHYELGSVALALVKRGLNPDRPLLVAGRAAQL 291
>gi|296268469|ref|YP_003651101.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833]
gi|296091256|gb|ADG87208.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833]
Length = 352
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 101/293 (34%), Gaps = 32/293 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ ++V G + +L ++ + + TL + + IL P G+I + + +
Sbjct: 45 SNRGVVRVSGPDRLSWLNSLSSQKLDTLRPGVPTQTLILDPHGRIEHHLTLV-DDGTAVW 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
++ LI L + V IE + V+S T + E
Sbjct: 104 AHVEPGTAADLIAFLEKMRFMLRVEIEDRTAEYAVVSVGAPGTEPAPRTLPEGIIAIGGD 163
Query: 127 L----HRTWGHNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
L R G +++ + + Y LRI I + PH+ + +
Sbjct: 164 LLVPRDRLAGIADELGLRLAGLWAYEALRIAAHIPRLGFE-TDHKTIPHEVGW-IEKAVH 221
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL--------------- 221
L KGCY GQE V+R+ + +R + + LPP G+P+
Sbjct: 222 LNKGCYRGQETVARVHNLGHPPRRLVFLHLDGSVDILPPHGAPVTLAGPAAAAGEPGAEP 281
Query: 222 --TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV--KASFPH 270
D ++G +G L + V + L GV + P
Sbjct: 282 DAGDRGQVGFVGSSARHYELGPIALALVKRTVPVDAPLLAGGVAASQEVIVPP 334
>gi|116671554|ref|YP_832487.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
gi|116611663|gb|ABK04387.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
Length = 361
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 102/275 (37%), Gaps = 38/275 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L + + V L + +L+ QG+I +
Sbjct: 44 VDLSHRGVVTVSGPDRLNWLNTLSSQQVTNLAPGESSELLLLSVQGRIEFDARVIDDGGT 103
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
T+++ ++ ++ L + L K V I ++ V+ S + +S ++ +
Sbjct: 104 TWLI-VEAAEAAPLAEWLNRMKFMLRVEIADVSDDWAVLGSTRRVEEWSGLKVWEDPWPH 162
Query: 123 ADVLLH--------------RTWGH------------NEKIASDIKTYHELRINHGIVDP 156
+ R W ++ + + LRI
Sbjct: 163 VGAGGYAYSVVAEESHPGMERPWFEYLVPAAELEATVGDRPLAGVWAAEALRIAAWRPRL 222
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213
+ PH+ + L + L KGCY GQE V+R+ + +R + + L
Sbjct: 223 GAE-TDDKTIPHELDL-LRTAVHLAKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTL 280
Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
P GS + + ++GT+ VV G ALA+ +
Sbjct: 281 PAVGSEVRLGERKVGTVTSVVQHYEMGPIALAVIK 315
>gi|326563032|gb|EGE13306.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 103P14B1]
gi|326577301|gb|EGE27189.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 101P30B1]
Length = 233
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + ++ G + FLQ ITA++ + +AI +G++ I++ F
Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + D+ I + Y S + + +N + D
Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
++ N+ +D + + +L I G T P + + G++ KGCY
Sbjct: 95 VIDDIPTFNKTQQTDTELWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+++R+ + + I G +PP+G + + + G +AL IAR +
Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPPTGGD-MGRMSVVNAIATDTGFEALVIARPE 212
Query: 246 KV 247
+
Sbjct: 213 DL 214
>gi|306836828|ref|ZP_07469786.1| folate-binding protein YgfZ [Corynebacterium accolens ATCC 49726]
gi|304567289|gb|EFM42896.1| folate-binding protein YgfZ [Corynebacterium accolens ATCC 49726]
Length = 444
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 100/275 (36%), Gaps = 29/275 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ S + ++V G A FL ++T + P + G+ L QG IL + I++ E
Sbjct: 137 AIDRSQRRALRVSGADAPGFLNNLLTQKLDDAPSGFSAGALDLDIQGHILHHMDITRESE 196
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D F L++ ++ +S D L S V +E I V L + +
Sbjct: 197 D-FYLDLPAAQFESAQDFLTKMVFWSEVTVEEADIAIVTLLGEADIPTPPTVVFSREVQW 255
Query: 123 ADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVDPNTDFLPSTIFPHD 169
+ E++ + + R+ + D PH+
Sbjct: 256 PGIKRVDLGFPREQLVESMAALEAEGARLAGLMAFTAERVRAREPELAADL-DKKSIPHE 314
Query: 170 ALMDLLN------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPI 220
+ + L KGCY GQE V+R+++ + +++ P G I
Sbjct: 315 VPQWISRSDADPAHVHLNKGCYRGQETVARVENLGRSPRLLVLLHLDGSAPERPNVGDDI 374
Query: 221 LTDDIEIGTLGVVV-----GKKALAIARIDKVDHA 250
+ ++G +G +V G AL + + +D
Sbjct: 375 SFNGRKVGRIGTIVDDCDFGPIALGLVKRSALDAG 409
>gi|294630097|ref|ZP_06708657.1| glycine cleavage T protein [Streptomyces sp. e14]
gi|292833430|gb|EFF91779.1| glycine cleavage T protein [Streptomyces sp. e14]
Length = 321
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G+ + +L ++T V LP A + IL+ G I + + +
Sbjct: 42 VDLSHRGVVTVSGEDRLGWLHLLLTQHVSELPAGQATEALILSAHGHIEHALYLV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ +++LI L K V + + + V+ + + E
Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTADTAVVHLPAGSIAEVPDGVVVRETAH 160
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R T+ + I + LR+ + PH+ +
Sbjct: 161 GRDLFLPREDLETYAEKTGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGAA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP G+ I D ++G
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSDVHLPPHGTEIRLADEGPDGRKVGV 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + G V+
Sbjct: 279 ITTSVRHYELGPVALAVIKRNVPVDARLTAGDTAAAQETVVEP 321
>gi|67922627|ref|ZP_00516133.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
gi|67855555|gb|EAM50808.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
Length = 353
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 109/300 (36%), Gaps = 49/300 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + FL T ++ +L + + G+ L + + + ED+
Sbjct: 46 SHWGLLQLTGSDRLRFLHNQTTNNINSLQPGQLSDTVFVNSTGRTL-DLVTAYVTEDSIF 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVII-EIQPINGVVLSWNQEHT--------------- 109
L + +++ L + + Y V I +I N + E T
Sbjct: 105 LLVSPNRQQFLYEWMDRYIFPMDKVGIKDISDKNAIFTIIGSEATTKLNQGDIANNAITE 164
Query: 110 --FSNSSFI---DERFSIADVLLHRTWG----HNEKIASDIKT--------------YHE 146
+N F+ DE+ I + + G E A + + +
Sbjct: 165 LSPNNHKFVTINDEKVLIGEGTGLKLPGYTLIFPENQAKTVWETLTNLGIIPVGDRVWEQ 224
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + P + + + IS KGCYIGQE ++R+ +++R
Sbjct: 225 LRIKQGRPYPDQELT-ENYNPLETGL--WSTISFDKGCYIGQETIARLNTYQGVKQRLWG 281
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262
+ ++ +G+ + DD ++G L + LA R +K + + +
Sbjct: 282 VKLNQEV-KAGNTVTLDDKKVGILTSSIQIEDEYIGLAYVRTKAGGEGLKVTIGEAIGEL 340
>gi|320582648|gb|EFW96865.1| Mitochondrial matrix protein [Pichia angusta DL-1]
Length = 458
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/329 (17%), Positives = 98/329 (29%), Gaps = 110/329 (33%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-----------------DVLTLPYKI------------ 38
N+ +++ G + FL ++T D+ L
Sbjct: 22 NRKLLEIKGPDSAKFLNGLLTTKMLPTFEKKNLTTISASDLQALENSKMLGLTDEQMQTE 81
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKI-----EEDTFILEI 69
R S +L +G++L + ++LE+
Sbjct: 82 NWGILHEDETYDPDVPERLGIRRDGRYSMLLNSKGRVLSDLFVYPTPYTPNNGPKYLLEM 141
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------------- 98
+ L +KLR+ + I + N
Sbjct: 142 APKNFGQIQMMLKLHKLRAKIDISVANYNSWFYYDHSEEFDEFYDLLQSEYLNNRNSKSV 201
Query: 99 GVVLSWNQ--------EHTFSNSSF-------IDERFSIADVLLHRTWGHNEKIASDI-- 141
+W++ E + + ID+R + + DI
Sbjct: 202 EAASTWSKYLQDRLVNEEILTEADASQLQGFAIDDRAPCFGLKFVLPPESQLQNLEDIKV 261
Query: 142 --KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ Y LR GI + + S P + +D +NGI+ KGCY+GQE+ R H +
Sbjct: 262 GHEVYDTLRTLVGISEISD--FKSETLPFENNLDYMNGINYNKGCYVGQELTIRTFHSGV 319
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIG 228
IRKR M I P + D ++G
Sbjct: 320 IRKRVMPIQLFRVGEPVSEELKLADEDLG 348
>gi|218438958|ref|YP_002377287.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424]
gi|218171686|gb|ACK70419.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424]
Length = 354
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 99/299 (33%), Gaps = 55/299 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ FL T ++ +L + + G+ L + ++
Sbjct: 47 SHWGLLQLKGEDRSRFLHNQTTNNINSLKSGQGCDTVFINSTGRTL-DLATVYVTDEAIE 105
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEH----------------- 108
+ + ++R L+ + Y V + + + H
Sbjct: 106 VLVSPNRRSFLMTWMDRYIFPMDKVELTDISEQNAIFTLLGPHSDRILEKLNLKSIIGQP 165
Query: 109 ----------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
T +FI R + + + + + E +
Sbjct: 166 VGSHLTGEVANCLVRVGVGTGLTLPGYTFIIPR--EKALPVWQEFVNTEVTLLGENVWEH 223
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + P ++ + IS KGCYIGQE ++R+ +++R
Sbjct: 224 LRILQGRPVPDRELT-EEYNPLESGL--WKTISFDKGCYIGQETIARLNTYKGVKQRLWG 280
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+ + + I ++ +IG L G LA + A +G+ +TV G
Sbjct: 281 VKLDHPV-EPDTEIFLEETKIGVLTSCTETQTGGFGLAYVKT----KAGGEGLRVTVKG 334
>gi|326561940|gb|EGE12275.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 7169]
gi|326570316|gb|EGE20360.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC1]
gi|326573625|gb|EGE23584.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis CO72]
Length = 233
Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + ++ G + FLQ ITA++ + +AI +G++ I++ F
Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + D+ I + Y S + + +N + D
Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
++ N+ +D K + +L I G T P + + G++ KGCY
Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+++R+ + + I G +PP+G + + L G +AL IAR +
Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPPTGGN-MGRMSIVNALATDTGFEALVIARPE 212
Query: 246 KV 247
+
Sbjct: 213 DL 214
>gi|254417054|ref|ZP_05030801.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus
chthonoplastes PCC 7420]
gi|196176221|gb|EDX71238.1| Glycine cleavage T-protein (aminomethyl transferase) [Microcoleus
chthonoplastes PCC 7420]
Length = 353
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 105/303 (34%), Gaps = 47/303 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS+ +K+ + + FL T D L + +T + + + + +
Sbjct: 42 ALVDLSHWGLLKISDEDRLRFLHNQSTNDFQKLKPGQGCDTVFVTSTARTI-DLVTAYVT 100
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
++ +L + ++R L++ L Y V + + + S + + + + +
Sbjct: 101 KEAVLLLVSPNRRQQLLEWLDRYIFPMDRVELADISNDSAIFSLIGPESDTLLTKLGVQL 160
Query: 121 SIADV-----------------------LLHRTWGHNEKIASDIKT-------------- 143
I DV L T A+++
Sbjct: 161 PIGDVYASHQHLNLNDIEVRIARGSGFALPGYTLIVPASNAANLWQTLTTANATPMGDRV 220
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P+ + P +A + N IS KGCYIGQE ++R+ ++++
Sbjct: 221 WQQLRIEQGRPLPDYELT-EDYNPLEAGL--WNTISFDKGCYIGQETIARLNTYKGVKQQ 277
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTV 259
+ + G+ I D ++G L G LA R ++ +
Sbjct: 278 LWGVRLPVSV-EPGTVITVDGEKVGKLTSCTPTEQGYIGLAYIRTKAGGVGLQVQVGEIE 336
Query: 260 HGV 262
V
Sbjct: 337 GDV 339
>gi|224044546|ref|XP_002192842.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 212
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 22/173 (12%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLI 57
++ + ++ + V G A FLQ ++T DV L A + L QG+ L ++
Sbjct: 23 TACFPLGRALLGVRGAEAAVFLQGLLTNDVTRLLAEGDAPRALYAHALNAQGRCLYDVIL 82
Query: 58 SKI-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
++ EE +LE D S DS+ L YK+R V I P + + +
Sbjct: 83 YRLHRSTAEEPHILLECDSSVLDSIQKHLKLYKIRRKVTISPCPDLSLWAVLPGDASSLP 142
Query: 113 SSF-------IDERFSIADVLLHRTWGHN------EKIASDIKTYHELRINHG 152
D R + L G N D++ YH R G
Sbjct: 143 KCADQALLLTPDPRTEVMGWRLIAKKGANLSEIIPGSQVGDVQDYHRHRYKQG 195
>gi|88855763|ref|ZP_01130426.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1]
gi|88815087|gb|EAR24946.1| hypothetical protein A20C1_06681 [marine actinobacterium PHSC20C1]
Length = 343
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 109/305 (35%), Gaps = 41/305 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S V L++++ + + G + +L ++ T + L + + +L P G+I + +
Sbjct: 23 SVVELADRAVLTITGPDRLTWLDSLTTQALTGLGAGDSAETLLLNPNGRIEHAMRVV-DD 81
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------ 103
+T L ID S R++L L + V I + + V +
Sbjct: 82 SETLWLLIDGSAREALAKWLDRMRFTLRVEIADRSDDFVTIGSFGDLGLPVAVSHEIPLV 141
Query: 104 WNQEHTF-SNSSFIDERFSIADVLLHRTWGHNEKIASDIK--------TYHELRINHGIV 154
WN + R + SD+ + LRI
Sbjct: 142 WNDSWAAVARGGHQYSRAEQHPGATWNYRESLVAVDSDLSDFAASGSLAFEALRIAAWRP 201
Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---GT 210
+T+ + PH+ +D + + L+KGCY GQE V+++ + +R +++
Sbjct: 202 WFSTE-VDDRSIPHE--LDWMRSAVHLSKGCYRGQETVAKVHNLGHPPRRLVLLHLDGSE 258
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRV 264
LP +G+ + + +GT+ G ALA+ R + +
Sbjct: 259 GALPEAGAEVSLGEKVVGTVTATARHFELGPIALAMIKRGVDAAETLAVASDVGAIAAAQ 318
Query: 265 KASFP 269
+ P
Sbjct: 319 EVIVP 323
>gi|218244955|ref|YP_002370326.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|257057980|ref|YP_003135868.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
gi|218165433|gb|ACK64170.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|256588146|gb|ACU99032.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
Length = 356
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 95/290 (32%), Gaps = 49/290 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ +++ G+ + FL T ++ L + + G+ L + + ++ +
Sbjct: 46 THWGLLQLTGEDRLRFLHNQTTNNINALKPGQGCYTVFVNSTGRTL-DLATAYVTDEAIL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109
L + ++R L++ + Y V I + + T
Sbjct: 105 LLVSPNRRQFLLEWMDRYIFPMDKVQISDISQQNAIFTLMGSETNKLLTQGGMNISNLVE 164
Query: 110 ------------------FSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHE 146
+ S +++ ++ + + +
Sbjct: 165 LPPENHTLVTIKNEFITVANGSGLAIPGYTLIVPINQAKIVWEELIKLGITPIGDRVWEQ 224
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + +A + IS KGCYIGQE ++R+ +++R
Sbjct: 225 LRIKQGRPFPDKELT-EDYIALEAGL--WQAISFDKGCYIGQETIARLNTYKGVKQRLWG 281
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK 252
+ T L G+P++ D +IG L + LA + +
Sbjct: 282 VKLT-QLVDPGTPVILDGNKIGILTSCIEIEQEFWGLAYVKTKAGGAGLT 330
>gi|187931894|ref|YP_001891879.1| hypothetical protein FTM_1232 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712803|gb|ACD31100.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 248
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 24/210 (11%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFI 66
N ++V G FLQ + TAD+ L +A +G+I+ + I + +
Sbjct: 7 NFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKLL 66
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L +++ ++L+ L Y + S V + F+ + F++ L
Sbjct: 67 LSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGSL 118
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183
+ T+ ++R + I + P + +D + + TKG
Sbjct: 119 ------------TSEMTFEQVRKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
CY+GQEV++R+ ++ ++K ++ D+
Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|172041293|ref|YP_001801007.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM
7109]
gi|171852597|emb|CAQ05573.1| putative aminomethyltransferase [Corynebacterium urealyticum DSM
7109]
Length = 391
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 58/322 (18%), Positives = 101/322 (31%), Gaps = 61/322 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ + V G+ A +L +I+ + + A IL QG + F ++ + ED +L
Sbjct: 52 DRVALWVHGEEAKTWLNDLISQKINAIQPGQATFGLILDVQGHVEYQFGVAAL-EDGILL 110
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-----SWNQEHTFSNSSFIDERFSI 122
++ + + L L + V +E + + + + +
Sbjct: 111 DVAAEQAEGLETYLSRMIFWAKVEVERLDLVQMAVLKKAGAQESAEDDRAGLGATPDGAF 170
Query: 123 ADVLLHRTWGHNEKIASDIK-------------------------TYHELRINHGIVDPN 157
D RT E +D+ Y RI
Sbjct: 171 PDAHSWRTRKLGEIAVTDVWLPADAQIGSWDHATAELGYAPTGLMAYTAWRIAARQPVIG 230
Query: 158 TDFLPSTIFPHDALMDL------------------LNGISLTKGCYIGQEVVSRIQHRNI 199
D PH+ L + + L KGCY GQE VSR+Q+
Sbjct: 231 ED-TDEKTIPHEVPWYLGENNHGATQLAQESEGPTAHAVHLNKGCYRGQETVSRVQNLGK 289
Query: 200 IRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR---IDKVD 248
+ +++ LP G+ + IG +G V G ALA+ R ++K+
Sbjct: 290 PPRTLVLLHLDGSRNALPEVGTDLTAGGRRIGRVGSSVHDAILGPIALALVRRNVVEKLA 349
Query: 249 HAIKKGMALTVHGVRVKASFPH 270
AL V
Sbjct: 350 TDPATVPALQAGEVDAAIDPAD 371
>gi|297200637|ref|ZP_06918034.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
gi|197709768|gb|EDY53802.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
Length = 321
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 97/275 (35%), Gaps = 17/275 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + +
Sbjct: 42 VDLSHRGVVSVTGDDRLSWLHLLLTQHVSDLPTGQATEALILSAHGHIEHALYLV-DDGT 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ +D+LI L K V + + V+ + E
Sbjct: 101 TVWAHVEPGTQDALIAYLESMKFFYRVDVADRTGEFAVVHLPAGSIAEVPEGVVVRETPY 160
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A + Y LR+ H + PH+ +
Sbjct: 161 GRDLFLPRADLESYAEKSGPAVGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGTA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP+G+ I D +IG
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGADIRLADEGPDGRKIGF 278
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ V L + V I L
Sbjct: 279 VTTSVRHHELGPVALALVKRNIPLDARLMADSTAA 313
>gi|328883978|emb|CCA57217.1| Folate-dependent protein for Fe or S cluster synthesis or repair in
oxidative stress [Streptomyces venezuelae ATCC 10712]
Length = 321
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T + L A + IL+ G I + +
Sbjct: 42 VDLSHRGVVAVTGDDRLSWLHLLVTQHMTDLAPGQATEALILSANGHIEHALYLV-DDGA 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ R+ L+ L K V + + + V+ + + E
Sbjct: 101 TVWAHVEPGTREELVAYLESMKFFYRVEVADRTDDFAVVHLPAGSIAEVPEGAVVRETPH 160
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + + A+ + Y LR+ + PH+ + + +
Sbjct: 161 GRDLFLPRADLESFAGSHGPAAGVLAYEALRVEAHRPRLGFE-TDHRTIPHEVGL-IGSA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LP G+PI + ++G
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVLLPGHGTPIRLAADGEEGRQLGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + G V+
Sbjct: 279 VTSSVRHHELGPIALALVKRNVPVDAPLVAGTTAAAQETVVEP 321
>gi|302552399|ref|ZP_07304741.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM
40736]
gi|302470017|gb|EFL33110.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM
40736]
Length = 321
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + + +
Sbjct: 42 VDLSHRGVVAVTGDDRLAWLHLLLTQHVSELPVGRATEALILSANGHIEHALYLV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ +++LI L K V + + + V+ + + E
Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYKVEVADRTADTAVVHLPAGSIADVPEGAVVRETPY 160
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + + I + LR+ + PH+ + +
Sbjct: 161 GRDLFLPRADLEAFAEQAGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGSA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LP +G+ + D +IG
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPTAGTEVRLADDGPDGRKIGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V V+
Sbjct: 279 ITTSARHHELGPVALALVKRNVAVDAPLVAGDTAAAQEVVVEP 321
>gi|119485425|ref|ZP_01619753.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
gi|119457181|gb|EAW38307.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
Length = 349
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 107/302 (35%), Gaps = 48/302 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ + FL T ++ +L S ++ + + + ED +
Sbjct: 46 SHWGLLQISDDDRLRFLHNQSTNNIQSLQPGQGCDSVFVSSTARTI-DLTTFYVTEDAVL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLS--WNQEHTFSNSSFIDE----- 118
+ + ++R LID L Y V ++ + S Q H I
Sbjct: 105 ILVSPNRRQMLIDWLDRYIFPMDRVELKDISDQNAIFSLIGPQSHQLLERLGITPLSDQP 164
Query: 119 --------------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148
R ++ L + +T + IA +T+ +LR
Sbjct: 165 YATHQQVEIENIPVRVAVGSGLTTTGYTLIVSVDHAVSIWKTLIASGAIAMGNRTWEQLR 224
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G P+++ P +A + IS KGCYIGQE ++R+ ++++ +
Sbjct: 225 IEQGRPVPDSELT-DDYNPLEAGL--WKTISFEKGCYIGQETIARLNTYKGVKQQLWGLK 281
Query: 209 GTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P G+ I +D ++G L G L R +K + TV G +
Sbjct: 282 LEAAVP-VGTEIKVEDKKVGKLTSFIETKAGFLGLGYIRTKAGGKGLKVKVG-TVEGEVI 339
Query: 265 KA 266
+
Sbjct: 340 EV 341
>gi|171915199|ref|ZP_02930669.1| glycine cleavage T protein, aminomethyl transferase
[Verrucomicrobium spinosum DSM 4136]
Length = 314
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 105/283 (37%), Gaps = 30/283 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60
V LS +S + G + +L +T +V + + + +G++ I
Sbjct: 15 YVNLSARSKWLLRGADRVRYLNGQVTNNVRAATETRSVYACVTNLKGRVEGDIFIHASAI 74
Query: 61 -EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHT------FSN 112
++ +++ + R+ L +L Y + +V +++ + ++ +E T
Sbjct: 75 GDDPVLVVDAEPGLREPLSLRLERYIIADDVELLDVTEEWQLWHAFGEEATQYHEMALPE 134
Query: 113 SSFIDE--RFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIVDPNTDFLPS 163
S+ RF + V L + ++ + RI G+ + P
Sbjct: 135 SAHRAAAWRFGLEGVDLWWPVAAGDPPLAEGMRPPLTSEELETWRICAGVPRWPNELNPE 194
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP---PSGSPI 220
FP +A + G+ KGCYIGQE++SRI+ + + + + G D P+G+ +
Sbjct: 195 -AFPPEAGLQE-RGMDYAKGCYIGQEILSRIKTTGKMPQSLVRLQGNGDAAALFPAGALL 252
Query: 221 LTDDI-----EIGTLGVVVGKKALAI-ARIDKVDHAIKKGMAL 257
++G + + + V A +L
Sbjct: 253 FHQKEDGILTKVGHVTSATLHPGHGLPVGLGYVKQAFASAHSL 295
>gi|194220206|ref|XP_001918326.1| PREDICTED: similar to CG8043 CG8043-PA [Equus caballus]
Length = 203
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
D P P ++ + +NG+S TKGCY+GQE+ +R H +IRKR + + LP
Sbjct: 78 GVHDLPPGVALPLESNLAFMNGVSFTKGCYVGQELTARTHHMGVIRKRLFPVQFSGPLPA 137
Query: 216 SG-----SPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
SG S + G G LA+ +++K+ + A V + AS P
Sbjct: 138 SGIAPGTSVLTESGQAAGKYRAGQGDVGLALLQLEKIRGPLHIRTA-ESGRVALTASVPD 196
Query: 271 WY 272
W+
Sbjct: 197 WW 198
>gi|296112437|ref|YP_003626375.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis RH4]
gi|295920131|gb|ADG60482.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis RH4]
gi|326567016|gb|EGE17139.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 12P80B1]
gi|326569580|gb|EGE19634.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC8]
gi|326572353|gb|EGE22346.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis BC7]
gi|326577879|gb|EGE27744.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis O35E]
Length = 233
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 28/242 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + ++ G + FLQ ITA++ + +AI +G++ I++ F
Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLPTAICNLKGRVQFGIWIARTLA-GF 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + D+ I + Y S + + +N + D
Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
++ N+ +D K + +L I G T P + + G++ KGCY
Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+++R+ + + I G +P +G + + L G +AL IAR +
Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPATGGD-MGRMSIVNALATDTGFEALVIARPE 212
Query: 246 KV 247
+
Sbjct: 213 DL 214
>gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
Length = 349
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 32/265 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ I + G + +L +I + + LP + + L G++L +F ++ + ++
Sbjct: 46 SNRRVITLTGPDRLSWLHSITSQHLTALPDGGSVQNLNLDGSGRVLDHFWVTDSDGTAYL 105
Query: 67 LEIDRSKR-------DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----- 114
+ L L R++V ++ + V+ + + +
Sbjct: 106 DTEPATLAPKEAPLSPDLGTYLQRMVFRADVQVQARDDLAVLTVFGPDAATVAEAVPGVR 165
Query: 115 --------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
I ER ++ D + + + Y R+ D
Sbjct: 166 RSEPDEVNLIIERAAVPDAITTLVAAGARPVGT--WAYEARRVAAAHARAGLD-TDDKTI 222
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL---PPSGSPILTD 223
PH+ + + L KGCY GQE ++R+ + +R +++ P +G P+ D
Sbjct: 223 PHEVNW-IGTAVHLDKGCYRGQETIARVHNIGRPPRRLVLLHLDGSADATPATGDPVTVD 281
Query: 224 DIEIGTLGVVV-----GKKALAIAR 243
+G LG VV G ALA+ +
Sbjct: 282 GRTVGRLGTVVEHADYGPIALALIK 306
>gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1]
Length = 373
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 44/301 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L ++T V LP + +L QG++L + ++ DT
Sbjct: 47 SHREVIAVSGEERLSWLHLLLTQHVSELPPDTGTEALVLDVQGRVLHHMAVAATG-DTVY 105
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE------------------ 107
L+ + + L+D L S V ++ V+ +
Sbjct: 106 LDTEPGEGAPLLDYLTKMVFWSKVEPRDVTGEFAVLGVVGPDVPDVLEKAGLPLPPAPHG 165
Query: 108 -HTFSNSSFI----DERFSIADVLLHRTW--------GHNEKIASDIKTYHELRINHGIV 154
F+ DV++ R A+ + LR+
Sbjct: 166 VAALPGGGFVRRTPWPGRDAVDVVVPRDATGTWWSALTAAGARAAGTIAFEALRVESRAP 225
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII---TGTD 211
+ D PH+ + + LTKGCY GQE V+R+ + +R +++ G +
Sbjct: 226 RLHRD-TDDRTIPHEVGW-IGPAVHLTKGCYRGQETVARVANLGRPPRRQVLLLLDAGDE 283
Query: 212 DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVK 265
+LP +G P+ DD +G +G VV G ALA+ R VD + G+ V +
Sbjct: 284 ELPRTGDPVRRDDRTVGRVGTVVQHHELGPVALALVKRSVPVDAELTAGVDDRVSPATID 343
Query: 266 A 266
Sbjct: 344 P 344
>gi|119964440|ref|YP_948688.1| aminomethyltransferase (glycine cleavage system Tprotein)
[Arthrobacter aurescens TC1]
gi|119951299|gb|ABM10210.1| putative aminomethyltransferase (Glycine cleavage system Tprotein)
[Arthrobacter aurescens TC1]
Length = 354
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 38/275 (13%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L + + + L +A +L+ QG+I +
Sbjct: 37 VDLSHRGVVTVTGPDRLSWLNTLSSQQLTNLQPGVASELLLLSVQGRIEFDARVIDDGGT 96
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
T+++ ++ ++ + L L K V I ++ VV + + ++ +
Sbjct: 97 TWLI-VETAEAEPLAVWLNRMKFMLRVEIQDVSEQWAVVGATKPLAQLAGRLVWEDPWPH 155
Query: 123 ADVLLH--------------RTWGHNEKIASDIKT------------YHELRINHGIVDP 156
+ R W +++++ LRI
Sbjct: 156 VSPGGYAYSIVPEESHPGLERPWYEYLVPSTELEQSVEGLALAGAMAADALRIAAWRPRL 215
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---L 213
+ PH+ + L + L KGCY GQE ++R+ + +R + + L
Sbjct: 216 GAE-TDEKTIPHELDL-LRTSVHLNKGCYKGQETIARVHNLGHPPRRLVFLQLDGSQHTL 273
Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
P GS + + ++GTL V G ALA+ +
Sbjct: 274 PAVGSVVFVGERKVGTLTSVAQHFEMGPVALAVIK 308
>gi|332184093|gb|AEE26347.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Francisella cf. novicida 3523]
Length = 248
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ D L+ L Y + S V + F+ + F++ D
Sbjct: 66 LLSVEQEVFDDLLAWLKKYGMFSKVSFNSNDDYALF--------FTKTGFLNHDVLTKDS 117
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGC 184
L T + +++L P + +D L + TKGC
Sbjct: 118 L---TSEMTFEQVQKENIFNKL-------ATINAANFEKFLPAELDLDNLDKVVCYTKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
Y+GQEV++R+ ++ ++K ++ D+
Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|328676869|gb|AEB27739.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Francisella cf. novicida Fx1]
Length = 248
Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+ + F++
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGS 117
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGC 184
L+ +E +K + I N + P + +D +N + TKGC
Sbjct: 118 LI------SEMTFEQVKKENIFNKLATINATNFE----KFLPAELDLDNVNKVVCYTKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
Y+GQEV++R+ ++ ++K ++ D+
Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|208779174|ref|ZP_03246520.1| hypothetical protein FTG_1468 [Francisella novicida FTG]
gi|208744974|gb|EDZ91272.1| hypothetical protein FTG_1468 [Francisella novicida FTG]
Length = 248
Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 22/210 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107
Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKG 183
L H I+ + + I + + N P + +D ++ + TKG
Sbjct: 108 LNHDILTKGSLISEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
CY+GQEV++R+ ++ ++K ++ D+
Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|118497380|ref|YP_898430.1| hypothetical protein FTN_0786 [Francisella tularensis subsp.
novicida U112]
gi|195536070|ref|ZP_03079077.1| hypothetical protein FTE_1029 [Francisella tularensis subsp.
novicida FTE]
gi|118423286|gb|ABK89676.1| protein of unknown function [Francisella novicida U112]
gi|194372547|gb|EDX27258.1| hypothetical protein FTE_1029 [Francisella tularensis subsp.
novicida FTE]
Length = 248
Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSSDSDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ D L+ L Y + S V + + F N + + I+++
Sbjct: 66 LLSVEQEVFDDLLAWLKKYGMFSKVSFNPNDDYALFFTKTG---FLNHDILTKGSLISEM 122
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGC 184
+ E I + + T + P + +D + + TKGC
Sbjct: 123 TFEQV--KKENIFNKLATINAANF-------------EKFLPAELDLDNVDKVVCYTKGC 167
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
Y+GQEV++R+ ++ ++K ++ D+
Sbjct: 168 YMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
Length = 341
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 47/298 (15%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V G+ + +L + + V + L G +L + ++ + +D+ +++
Sbjct: 27 YRVIEVTGEDRLTYLNTLFSQKVDDATPGTVTEALNLDANGHVLHHMTLTVL-DDSVLID 85
Query: 69 IDRSKRDSLIDKLLFYKLRSNVII----------------EIQPINGVVLSWNQEHTFSN 112
+ DSL+ L S V I E+ G+ + T
Sbjct: 86 VPPVGFDSLLKYLNMMVFWSKVEIAEAERAIISVMGPNAPEVLVSAGLAFPQVGKATTVG 145
Query: 113 SSFI----DERFSIADVLLHR--TWGHNEKIASDIKT------YHELRINHGIVDPNTDF 160
S++ R DVL+ R G E + + + + R+ + D
Sbjct: 146 HSYVRHVPWPRGGRVDVLVRRQDLVGAWEALVAAGASPVGLMGWEAERVVSLRPELGID- 204
Query: 161 LPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDL 213
+ + PH+A + + L KGCY GQE VSR+ + + +++ G+ L
Sbjct: 205 VDEKMIPHEAPRWIASEFDTAAVHLDKGCYRGQETVSRVHNVGRSPRVLVMLQLDGSATL 264
Query: 214 PPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
P +G P++ +G +G VV G ALA+ + + ++ L V V
Sbjct: 265 PETGDPVMMGKRAVGRVGTVVQHADYGPIALALLK-----RSAQEREGLVVGDCAVAV 317
>gi|56708171|ref|YP_170067.1| hypothetical protein FTT_1088c [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670642|ref|YP_667199.1| hypothetical protein FTF1088c [Francisella tularensis subsp.
tularensis FSC198]
gi|224457273|ref|ZP_03665746.1| hypothetical protein FtultM_06160 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370655|ref|ZP_04986660.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874978|ref|ZP_05247688.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604663|emb|CAG45721.1| hypothetical protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320975|emb|CAL09104.1| hypothetical protein FTF1088c [Francisella tularensis subsp.
tularensis FSC198]
gi|151568898|gb|EDN34552.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840977|gb|EET19413.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159384|gb|ADA78775.1| hypothetical protein NE061598_06270 [Francisella tularensis subsp.
tularensis NE061598]
Length = 248
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 24/211 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+ + F++
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF--------FTKTGFLNHDILTKGS 117
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLL-NGISLTK 182
L + T+ +++ + I + P + +D + + TK
Sbjct: 118 L------------TSEMTFEQIQKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
GCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 166 GCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|254374202|ref|ZP_04989684.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571922|gb|EDN37576.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 248
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHDALMDLLN-GISLTK 182
L H I+ T+ +++ + I + P + +D ++ + TK
Sbjct: 108 LNHDILTKGSLISE--MTFEQVKKENIINKLATINAANFEKFLPAELDLDNVDKVVCYTK 165
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
GCY+GQEV++R+ ++ ++K ++ D+
Sbjct: 166 GCYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|297565303|ref|YP_003684275.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
gi|296849752|gb|ADH62767.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
Length = 339
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 44/297 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + ++V G F+ T+DV LP + L +G+I + +
Sbjct: 41 ALLDFPETGLLQVGGMDCRDFIHNQCTSDVRGLPQGGFLKTLFLNSRGQIEFLGSVYQRG 100
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ L I ++ +L+++ Y + V + L + + +
Sbjct: 101 QT---LWIAAARTQALLERFNRYIVFDQVELSDLSQAYTQLRLQGPAALEVGGQLGQPPA 157
Query: 122 I-----------------ADVLLHRTWG--------HNEKIASDIKTYHELRINHGIVDP 156
D+L+ R + + Y R+ G+ D
Sbjct: 158 KWSLVEHHQVVLARDEWGLDILVPRDLAEEVFNQLLQAGATPAGREAYRVWRVEQGVADL 217
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
P + ++ +S KGCY+GQE+++R++ R R + M + G LPP
Sbjct: 218 EDALGE---LPQEVGLEAR--VSYKKGCYLGQEIMARLEARGNTRYQLMGLLGQQPLPPE 272
Query: 217 GSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ + + ++G + +G ALA+ R + G + V +
Sbjct: 273 -AEVWREGKKVGRVTTATDSPRLGPVALALLR-----KGLVPGDQVEVGAASPRLLR 323
>gi|326560812|gb|EGE11178.1| glycine cleavage T protein/aminomethyl transferase [Moraxella
catarrhalis 46P47B1]
Length = 233
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 28/242 (11%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ + ++ G + FLQ ITA++ + +AI +G++ I++ F
Sbjct: 1 MTDFCYFEMTGTDSEKFLQGQITANIADIGE-QFLSTAICNLKGRVQFGIWIARTLA-GF 58
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + D+ I + Y S + + +N + D
Sbjct: 59 DIVMSSDMADNFIMHIKKYGAFSKITLS----------------SANPIYPD-------- 94
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
++ N+ +D K + +L I G T P + + G++ KGCY
Sbjct: 95 VIDDIPTFNKTQQTDTKLWEQLSIKTG-NYWLTAKTSEMYQPQELRLHQKGGVAYDKGCY 153
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+GQE+++R+ + + I G +P +G + + L G +AL IAR +
Sbjct: 154 LGQEIIARLYFKARPKAYLHRILGVGAIPATGGD-MGRMSIVNALATDTGFEALVIARPE 212
Query: 246 KV 247
+
Sbjct: 213 DL 214
>gi|84498436|ref|ZP_00997206.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
gi|84381179|gb|EAP97063.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
Length = 342
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 43/300 (14%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V LS++ ++V G + +L +I T + L +++ S +L+P+G I I
Sbjct: 45 LAVVDLSHRGVVRVTGPDRLTWLHSITTQQLTGLAPRVSTESLVLSPKGHIEHDLHIVDD 104
Query: 61 EEDTFILEIDRSKRDSLIDKLL--FYKLR---SNVI---------IEIQPINGVVLSWNQ 106
E T + ++ +L+ L + LR S+V + + G L+W
Sbjct: 105 GEST-WITVEPGTSPALVAWLDSMRFMLRVEVSDVTDAYAVLGEPLSAASVEGEPLAWVD 163
Query: 107 EHT---------FSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHGIV 154
+ E ++++ R ++ + I LR+
Sbjct: 164 PWPNLVADTAAYGPETEHPGESRRWRELIVPRADLEAAVGDRPLAGIWAAEALRVAAWRP 223
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-- 212
+ H+ L + L KGCY GQE V+R+ + +R + +
Sbjct: 224 RLGFE-TDHRTIAHEVDW-LRTAVHLHKGCYRGQETVARVHNLGRPPRRIVFLHLDGSGH 281
Query: 213 -LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR------IDKVDHAIKKGMALTVH 260
LP +G+P++ + EIG + V G ALA+ + +D V + + V
Sbjct: 282 LLPEAGAPLVLEGREIGRITSVARHHEDGPIALAVIKRNTPDDVDLVAGTVAGAQTVIVG 341
>gi|313828749|gb|EFS66463.1| folate-binding protein YgfZ [Propionibacterium acnes HL063PA2]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V + ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLALLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|289424224|ref|ZP_06426007.1| folate-binding protein YgfZ [Propionibacterium acnes SK187]
gi|289154921|gb|EFD03603.1| folate-binding protein YgfZ [Propionibacterium acnes SK187]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V I ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEIALRPDMTVRW-FGHDVAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGAYIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|225848748|ref|YP_002728912.1| glycine cleavage T-protein C- barrel domain protein
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644667|gb|ACN99717.1| glycine cleavage T-protein C- barrel domain protein
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 297
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 62/295 (21%), Positives = 107/295 (36%), Gaps = 43/295 (14%)
Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49
M+ + L N+ I V G + FL I++ D++ L + +L +G
Sbjct: 1 MNWISL-NRHKILVKGKKSKLNLKGVNEEHKAFLHNILSNDIVNLQTGRFNYNLMLDSKG 59
Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
L F + ++ +IL+ + + I+KL KL V E+ P + +
Sbjct: 60 SPLTDFFVYN-NDNVYILDTEEDPYQT-IEKLNKLKLSLQVNFEVLPSRHLYIFGENVED 117
Query: 110 F---------------SNSSFIDERFSIADVLLHRTWGHNEKIAS--------DIKTYHE 146
F S+ F+ V + +G E I ++ + +
Sbjct: 118 FIKSMGLNLEKFSFAKSHKYFVANNPLRLGVKGYDIFGDIENILDLLNPQDEISLQDFED 177
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI I + I P + + ISL KGCY+GQE V+R+ +R +
Sbjct: 178 LRIKSCIPKIKKEL-KENILPLETNI-WKYAISLNKGCYVGQEAVARVYYRGKPPRVMAK 235
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV--GKKALA-IARIDKVDHAIKKGMALT 258
D+ I+ + IG + + GK L I R + G+ L
Sbjct: 236 FLINKDIKEE-DKIIFEGKSIGIMTSITTDGKTGLGFILRAKAQEGKDYDGIILE 289
>gi|163784745|ref|ZP_02179551.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879986|gb|EDP73684.1| hypothetical protein HG1285_11008 [Hydrogenivirga sp. 128-5-R1-1]
Length = 306
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/285 (20%), Positives = 105/285 (36%), Gaps = 42/285 (14%)
Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49
M+ + L+ ++ IKV G + FL + T D+ L + + L +G
Sbjct: 1 MNWIKLT-RAKIKVYGKKSKLAIKGVAEEHKAFLHGLFTNDINGLLPEHFNYNLRLNGKG 59
Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQE 107
+ F + E FIL+ + D +I++ KL V E Q + +
Sbjct: 60 YPVQDFFVYNFGE-YFILDT-KENADKVIEEFTKLKLSMQVFFENLTQQNEHIYIFGENT 117
Query: 108 HTFSNSSF----------------IDERFSIADVLLHRTWGHNEKIAS--------DIKT 143
F +F I + F + +G+ EK+ + +
Sbjct: 118 DKFVEENFNISLKPFEFKTVKNFTIAKNFLRNGENGYDFFGNLEKVKTLLPKENEISQEE 177
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +RI + I + + P + + IS TKGCY+GQEV++R+ +R +
Sbjct: 178 FENIRIKNCIPKIHKELKEG-YLPLETPI-TPYAISFTKGCYVGQEVIARVHYRGKPPRT 235
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVD 248
G I+ D +IG + V + +A+ I K
Sbjct: 236 LAKFEVDRQKIKEGEKIIDGDKKIGEITSVSPVENIALGYILKAK 280
>gi|50841834|ref|YP_055061.1| putative glycine cleavage T-protein [Propionibacterium acnes
KPA171202]
gi|289428836|ref|ZP_06430516.1| folate-binding protein YgfZ [Propionibacterium acnes J165]
gi|295129911|ref|YP_003580574.1| folate-binding protein YgfZ [Propionibacterium acnes SK137]
gi|50839436|gb|AAT82103.1| conserved protein, putative glycine cleavage T-protein
[Propionibacterium acnes KPA171202]
gi|289157837|gb|EFD06060.1| folate-binding protein YgfZ [Propionibacterium acnes J165]
gi|291376436|gb|ADE00291.1| folate-binding protein YgfZ [Propionibacterium acnes SK137]
gi|313772891|gb|EFS38857.1| folate-binding protein YgfZ [Propionibacterium acnes HL074PA1]
gi|313793088|gb|EFS41155.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA1]
gi|313802465|gb|EFS43687.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA2]
gi|313806479|gb|EFS44986.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA2]
gi|313811031|gb|EFS48745.1| folate-binding protein YgfZ [Propionibacterium acnes HL083PA1]
gi|313814468|gb|EFS52182.1| folate-binding protein YgfZ [Propionibacterium acnes HL025PA1]
gi|313817348|gb|EFS55062.1| folate-binding protein YgfZ [Propionibacterium acnes HL046PA2]
gi|313821907|gb|EFS59621.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA1]
gi|313824197|gb|EFS61911.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA2]
gi|313826565|gb|EFS64279.1| folate-binding protein YgfZ [Propionibacterium acnes HL063PA1]
gi|313831794|gb|EFS69508.1| folate-binding protein YgfZ [Propionibacterium acnes HL007PA1]
gi|313834662|gb|EFS72376.1| folate-binding protein YgfZ [Propionibacterium acnes HL056PA1]
gi|313840107|gb|EFS77821.1| folate-binding protein YgfZ [Propionibacterium acnes HL086PA1]
gi|314926721|gb|EFS90552.1| folate-binding protein YgfZ [Propionibacterium acnes HL036PA3]
gi|314961072|gb|EFT05173.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA2]
gi|314964500|gb|EFT08600.1| folate-binding protein YgfZ [Propionibacterium acnes HL082PA1]
gi|314974666|gb|EFT18761.1| folate-binding protein YgfZ [Propionibacterium acnes HL053PA1]
gi|314977139|gb|EFT21234.1| folate-binding protein YgfZ [Propionibacterium acnes HL045PA1]
gi|314980445|gb|EFT24539.1| folate-binding protein YgfZ [Propionibacterium acnes HL072PA2]
gi|314985763|gb|EFT29855.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA1]
gi|314987286|gb|EFT31377.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA2]
gi|314989170|gb|EFT33261.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA3]
gi|315078485|gb|EFT50516.1| folate-binding protein YgfZ [Propionibacterium acnes HL053PA2]
gi|315082052|gb|EFT54028.1| folate-binding protein YgfZ [Propionibacterium acnes HL078PA1]
gi|315082808|gb|EFT54784.1| folate-binding protein YgfZ [Propionibacterium acnes HL027PA2]
gi|315086164|gb|EFT58140.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA3]
gi|315087748|gb|EFT59724.1| folate-binding protein YgfZ [Propionibacterium acnes HL072PA1]
gi|315097497|gb|EFT69473.1| folate-binding protein YgfZ [Propionibacterium acnes HL038PA1]
gi|315106415|gb|EFT78391.1| folate-binding protein YgfZ [Propionibacterium acnes HL030PA1]
gi|327331417|gb|EGE73156.1| folate-binding protein YgfZ [Propionibacterium acnes HL096PA2]
gi|327333403|gb|EGE75123.1| folate-binding protein YgfZ [Propionibacterium acnes HL096PA3]
gi|327334927|gb|EGE76638.1| folate-binding protein YgfZ [Propionibacterium acnes HL097PA1]
gi|327445578|gb|EGE92232.1| folate-binding protein YgfZ [Propionibacterium acnes HL013PA2]
gi|327447198|gb|EGE93852.1| folate-binding protein YgfZ [Propionibacterium acnes HL043PA1]
gi|327449767|gb|EGE96421.1| folate-binding protein YgfZ [Propionibacterium acnes HL043PA2]
gi|327457035|gb|EGF03690.1| folate-binding protein YgfZ [Propionibacterium acnes HL092PA1]
gi|328758819|gb|EGF72435.1| folate-binding protein YgfZ [Propionibacterium acnes HL020PA1]
gi|328761832|gb|EGF75344.1| folate-binding protein YgfZ [Propionibacterium acnes HL099PA1]
gi|332674750|gb|AEE71566.1| glycine cleavage T protein [Propionibacterium acnes 266]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V + ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|134302296|ref|YP_001122265.1| putative aminomethyl transferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050073|gb|ABO47144.1| putative aminomethyl transferase [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 248
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107
Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183
L H + + + I + + N P + +D + + TKG
Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
CY+GQEV++R+ ++ ++K ++ D+
Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|302535834|ref|ZP_07288176.1| glycine cleavage T protein [Streptomyces sp. C]
gi|302444729|gb|EFL16545.1| glycine cleavage T protein [Streptomyces sp. C]
Length = 322
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + + +
Sbjct: 43 VDLSHRGVVTVTGADRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLV-DDGE 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--SFIDERFS 121
T ++ +++L+ L K V + + + V+ + E
Sbjct: 102 TVWAHVEPGTQEALLGYLESMKFFYRVEVADRTADFAVVHLPAGSIAEPGKEHVVRETAH 161
Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L R A Y LR+ + PH+ +
Sbjct: 162 GRDVFLPRPQLEAFAAAHGPAAGLLAYEALRVEAHRPRVGAE-TDHRTIPHELGW-IGTA 219
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LP G+P+ D ++G
Sbjct: 220 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPVRLAADGEDGRQLGF 279
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + G V V
Sbjct: 280 VTTAVRHHELGPIALALVKRNVPVDAPLLAGNTAAAQEVVVAP 322
>gi|314969600|gb|EFT13698.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA1]
gi|315110305|gb|EFT82281.1| folate-binding protein YgfZ [Propionibacterium acnes HL030PA2]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V + ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|282853410|ref|ZP_06262747.1| folate-binding protein YgfZ [Propionibacterium acnes J139]
gi|282582863|gb|EFB88243.1| folate-binding protein YgfZ [Propionibacterium acnes J139]
gi|314982546|gb|EFT26639.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA3]
gi|315091041|gb|EFT63017.1| folate-binding protein YgfZ [Propionibacterium acnes HL110PA4]
Length = 313
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMERGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + S+ L L + V + ++P V + + + +D +
Sbjct: 94 QTFWVWTEPSRGADLGAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVPDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|307329882|ref|ZP_07609036.1| folate-binding protein YgfZ [Streptomyces violaceusniger Tu 4113]
gi|306884493|gb|EFN15525.1| folate-binding protein YgfZ [Streptomyces violaceusniger Tu 4113]
Length = 321
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L +IT V LP A + IL+ G I I + +
Sbjct: 42 VDLSHRGVVTVTGADRLSWLHLLITQHVSELPPGQATEALILSTHGHIEHALYIV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T ++ + LI L K V I + + V+ + + E
Sbjct: 101 TTWAHVEPDSQGDLIAYLESMKFFYRVDIADRSDDYAVVHLPAGSITEAPEDTVVRETPH 160
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A + Y LR+ + PH+ + +
Sbjct: 161 GRDLFLPRARLTDFAEASGPAIGVLAYEALRVEAHRPRVGLE-TDHRTIPHELGW-IGSA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LP G+PI + ++G
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVTLPSHGAPIRLASEGEEGRQLGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + V+
Sbjct: 279 ITSSARHHELGPIALALVKRNVPVDAELIADSTAAAQETVVEP 321
>gi|297627128|ref|YP_003688891.1| glycine cleavage T-protein, aminomethyl transferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922893|emb|CBL57475.1| glycine cleavage T-protein, aminomethyl transferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 349
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 46/301 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V L+N+ + V G + +L ++ T LP + IL+P G++
Sbjct: 34 AIVALTNRQVLTVTGDDRLGWLHSLSTGRFDGLPPGQGLNALILSPTGQVRYGLQAVDDG 93
Query: 62 EDTFILEIDRSKRDS----------------------LIDKLLFYKLRSNVIIEIQPING 99
E +++ S L + L + R V + +
Sbjct: 94 ERLWVITDPASSASPDDPAEPAPATGVPTGPDMQGVGLAEFLDSMRFRLKVQVSPRDDAR 153
Query: 100 VVLSWNQ----EHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRINHG 152
V+ + + + +D +++ + + + + R+ G
Sbjct: 154 VLWVGEGIDPADLPAALAPAVDAPLGHGQLVIVAADDVPSPDNPRLAGVWAWEAARVAAG 213
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D P++ + L KGCY GQE V+R+ + +R + +
Sbjct: 214 VPRIGID-TDDKTLPNELGL---YATELDKGCYTGQETVARVHNVGRPPRRLVRLLLDGS 269
Query: 213 ---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
LP G PIL D +G +G G AL + R A+ L+V +
Sbjct: 270 MNRLPAPGDPILLDGEPVGVVGSSAQHFEEGPIALGLVR-----RAVPVEATLSVDDIAA 324
Query: 265 K 265
Sbjct: 325 N 325
>gi|294814029|ref|ZP_06772672.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
gi|326442433|ref|ZP_08217167.1| hypothetical protein SclaA2_15264 [Streptomyces clavuligerus ATCC
27064]
gi|294326628|gb|EFG08271.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
Length = 330
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 29/290 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS++ + V G+ + +L ++T + LP A + IL+ G + +
Sbjct: 44 LVDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG- 102
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------GVVLSWNQEHTFSNSS 114
DT ++ ++ LI L K V + + + G + + + +
Sbjct: 103 DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTETV 162
Query: 115 FIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
+ E D+ L R ++ + + Y LR+ + PH+
Sbjct: 163 VVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVEAHRPRVGFE-TDHRTIPHEL 221
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----T 222
+ + L KGCY GQE V+R+Q+ +R + + LP +G+PI
Sbjct: 222 GW-IGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAADGE 280
Query: 223 DDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ ++G + G ALA+ R VD A+ G V+
Sbjct: 281 EGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAGTTAASQETVVEP 330
>gi|254388558|ref|ZP_05003792.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702279|gb|EDY48091.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 327
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 29/290 (10%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS++ + V G+ + +L ++T + LP A + IL+ G + +
Sbjct: 41 LVDLSHRGVLTVTGEDRLAWLHLLLTQHMTELPPGRATEALILSANGHVEHALYLVDTG- 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------GVVLSWNQEHTFSNSS 114
DT ++ ++ LI L K V + + + G + + + +
Sbjct: 100 DTVWAHVEPGSQEELIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEVPETPGTTETV 159
Query: 115 FIDERFSIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
+ E D+ L R ++ + + Y LR+ + PH+
Sbjct: 160 VVRETPHGRDLFLPRERLESYAAANGPLAGVLAYEALRVEAHRPRVGFE-TDHRTIPHEL 218
Query: 171 LMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----T 222
+ + L KGCY GQE V+R+Q+ +R + + LP +G+PI
Sbjct: 219 GW-IGTAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPAAGTPIRLAADGE 277
Query: 223 DDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ ++G + G ALA+ R VD A+ G V+
Sbjct: 278 EGRQLGFVTTSARHHELGPIALALVKRNVPVDAALIAGTTAASQETVVEP 327
>gi|163783071|ref|ZP_02178066.1| hypothetical protein HG1285_00810 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881751|gb|EDP75260.1| hypothetical protein HG1285_00810 [Hydrogenivirga sp. 128-5-R1-1]
Length = 308
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/305 (19%), Positives = 114/305 (37%), Gaps = 46/305 (15%)
Query: 1 MSSVYLSNQSFIKVCG-------------KSAIPFLQAIITADVLTLPYKIARGSAILTP 47
M + L N+S +K+ G + FL +++T +V L + L
Sbjct: 1 MKWIEL-NRSKVKIFGKPAKVLMKGMTAPEEHTHFLHSLLTNNVKALSPGTFNYNLWLRQ 59
Query: 48 QGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI--QPINGVVLSWN 105
G+ + F + K++ D ++L+ D+ + +I++ KL V E Q + + L
Sbjct: 60 NGQPVADFFVYKVQ-DYYLLDTDKP-AEEVIEEFNRLKLSLKVYFEDLTQQLRHIFLFGE 117
Query: 106 QEHTFSNSSFIDE---------------------RFSIADVLLHRTWGHNEKIASD---I 141
F +F E R DV+ + E D
Sbjct: 118 GSDEFIKDAFGVEFGDFEVKEINGLLVAKNPVRLRQKGYDVMGDLSNFMGELPEGDRIGE 177
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ +LRI + + P +A + L I + KGCY+GQE ++R+ R
Sbjct: 178 VEFEDLRIERCVPRIGKELKEG-FSPLEAGV-LSYAIDMNKGCYVGQEAIARVYFRGRTP 235
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
+ + + + G +L +G + V LA+ + + + + GM ++ G
Sbjct: 236 RMLVKVHKVEGSIQEGDKLLEGQKAVGVITSVNSTGELALGYV--LRNIYRPGMEVSTAG 293
Query: 262 VRVKA 266
+++
Sbjct: 294 GKIRL 298
>gi|329936234|ref|ZP_08286027.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045]
gi|329304344|gb|EGG48224.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045]
Length = 323
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G+ + +L ++T V LP A + IL+P G I + + +
Sbjct: 44 VDLSHRGVVTVTGEDRLSWLHLLLTQHVSDLPAHRATEALILSPHGHIEHALYLV-DDGE 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
T ++ +++L+ L K + V + + + ++ + R +
Sbjct: 103 TTWAHVEPGTQEALVAYLESMKFFNRVEVADRTADYALVHQPAGSIADVPGGVVVRETPY 162
Query: 124 DVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
L G E A+ + Y LR+ + PH+ +
Sbjct: 163 GRELFLPRGDLEAYAAGHGPAAGLLAYEALRVEQHRPRLGFE-TDHRTIPHELGW-IATA 220
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP G+ + + +IG
Sbjct: 221 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPQGTELRLAADGPEGRKIGF 280
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + V+
Sbjct: 281 ITTSVRHHELGPVALALVKRNVPVDAPLLADSTAAAQETVVEP 323
>gi|302559915|ref|ZP_07312257.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
griseoflavus Tu4000]
gi|302477533|gb|EFL40626.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
griseoflavus Tu4000]
Length = 321
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/283 (21%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + + +
Sbjct: 42 VDLSHRGVVTVSGPERLAWLHLLLTQHVSDLPPHRATEALILSANGHIEHALYLV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-- 121
T ++ +++LI L K V + + + V+ + R +
Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTDDIAVVHLPAGSIAEAPEGVAVRETPY 160
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A+ + + LR+ + PH+ +
Sbjct: 161 GRDLFLPRADLEAYAEKAGPAAGLLAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGTA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP+G+ I + IG
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPAGTEIRVADDGAEGRRIGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + G V+
Sbjct: 279 VTTSVRHHELGPVALALVKRNVPVDARLLAGETAAAQETVVEP 321
>gi|256397340|ref|YP_003118904.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928]
gi|256363566|gb|ACU77063.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928]
Length = 335
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 98/282 (34%), Gaps = 32/282 (11%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ ++V G + +L + + + +L +A + IL+PQG++ + E
Sbjct: 43 VDLSHRGVLRVSGPDRLTWLHSFTSQHLESLKPGVAVEALILSPQGRVEHALYLVDDGEA 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
T+ ++ ++ L + V E ++ + D +
Sbjct: 103 TWF-HVEPGAAPEILAFLQKMRFMMRVEPEDVTAGYALV-------LTTGPVPDGVLARE 154
Query: 124 DVLLHRTWGHNEKIA-----------SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
L H + E++A + + Y LRI + PH+ +
Sbjct: 155 VDLGHELFLPRERLASFAKDGGAGDPAGMWAYEALRIAAHRPRVGRE-TDDRTIPHE--I 211
Query: 173 DLL------NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI-LT 222
D + + L KGCY GQE V+R+ + +R + + LP G+ +
Sbjct: 212 DWIASEGHPGAVHLNKGCYRGQETVARVDNLGHPPRRLVFLHLDGTPERLPAHGADVTTA 271
Query: 223 DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
D +G + L + V L G+
Sbjct: 272 DGRVVGQVTSAARHYELGHVALAVVKRTTPVDDQLLADGIPA 313
>gi|254372745|ref|ZP_04988234.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570472|gb|EDN36126.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 248
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNDDYALF------------------FTKTGF 107
Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183
L H + + + I + + N P + +D + + TKG
Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
CY+GQEV++R+ ++ ++K ++ D+
Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSQVDI 196
>gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
Length = 364
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 100/301 (33%), Gaps = 44/301 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L ++ + L +L QG++ + +++ +
Sbjct: 47 SHRGVIAVPGEDRLTWLHSLTSQHFTALGQDRGTEMLVLDAQGRVEHHAVVANTGGTAY- 105
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L+++ L++ L S V +L+
Sbjct: 106 LDVEAETTAPLLEYLSRMVFWSKVEPRDATAELALLTVAGPDAAELLGKLDVPVPDGADG 165
Query: 110 --------------FSNSSFID---ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + +D R + D A+ + LR+
Sbjct: 166 VRELPGGGFARRVSWPGAGAVDLLVPRGELGD--WWSRLTGAGARAAGSWAFTALRVESL 223
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
P D PH+ + + + L KGCY GQE V+++Q+ +R +++
Sbjct: 224 RPRPGVD-TDEKTIPHEVNW-IGSAVHLDKGCYRGQETVAKVQNVGRPPRRMLLLHLDGT 281
Query: 213 ---LPPSGSPILTDDIEIGTLGVVVGKKALA--IARIDKVDHAIKKGMALTVHGVRVKAS 267
P +G P+ D +G +G V L + + K + + + V+AS
Sbjct: 282 REVQPETGDPVRHGDRVVGRVGSVALHHDLGPVVLALVKRSVPVDAELLVGAEDRVVQAS 341
Query: 268 F 268
Sbjct: 342 V 342
>gi|302543595|ref|ZP_07295937.1| folate-binding protein YgfZ [Streptomyces hygroscopicus ATCC 53653]
gi|302461213|gb|EFL24306.1| folate-binding protein YgfZ [Streptomyces himastatinicus ATCC
53653]
Length = 324
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 22/259 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + + +
Sbjct: 45 VDLSHRGVVTVTGADRLSWLHLLLTQHVSELPAGEATEALILSAHGHIEHALYLV-DDGE 103
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ + LI L K V I + V+ S+ E
Sbjct: 104 TTWAHVEPGSQGDLIAYLESMKFFYRVEIADRTEEYAVVHLPAGSIAETPGSAVARETAH 163
Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + AS Y LR+ + PH+ +
Sbjct: 164 GRDLFLPRAGLESFAAASGPAIGVLAYEALRVEAHRPRIGLE-TDHRTIPHELGW-IGTA 221
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LP G+PI D ++G
Sbjct: 222 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVKLPGHGAPIRLAADGEDGRQLGF 281
Query: 230 LGVVV-----GKKALAIAR 243
+ G ALA+ +
Sbjct: 282 VTSSARHHELGPIALALVK 300
>gi|29830571|ref|NP_825205.1| hypothetical protein SAV_4028 [Streptomyces avermitilis MA-4680]
gi|29607683|dbj|BAC71740.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 321
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 62/283 (21%), Positives = 108/283 (38%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LSN+ + V G+ + +L ++T V LP A + IL+ G I + +
Sbjct: 42 VDLSNRGVVTVTGEDRLSWLHLLLTQHVSELPAHRATEALILSAHGHIEHALYLV-DDGT 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI- 122
T ++ +++LI L K V + + V+ + + R +
Sbjct: 101 TTWAHVEPGTQEALIAYLESMKFFYRVEVADRTGEFAVVHLPAGSIADVPADVVVRETAY 160
Query: 123 -ADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A+ + Y LR+ H + PH+ + +
Sbjct: 161 GRDLFLPRAELESYADRSGPAAGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGSA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP G+ + D +IG
Sbjct: 219 VHLEKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPHGTELRLADDGPDGRKIGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R +D + V V+
Sbjct: 279 VTTSVRHHELGPIALALVKRNVPLDAPLVADNTAAAQEVVVEP 321
>gi|314922326|gb|EFS86157.1| folate-binding protein YgfZ [Propionibacterium acnes HL001PA1]
gi|314965386|gb|EFT09485.1| folate-binding protein YgfZ [Propionibacterium acnes HL082PA2]
gi|315094129|gb|EFT66105.1| folate-binding protein YgfZ [Propionibacterium acnes HL060PA1]
gi|315104778|gb|EFT76754.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA2]
gi|327329331|gb|EGE71091.1| folate-binding protein YgfZ [Propionibacterium acnes HL103PA1]
Length = 313
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMERGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + + L L + V + ++P V + + + +D +
Sbjct: 94 QTFWVWTEPGRGADLGAWLDSMRFMMRVEVALRPDMTVRW-FGHDVAVPDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|89256440|ref|YP_513802.1| hypothetical protein FTL_1115 [Francisella tularensis subsp.
holarctica LVS]
gi|115314875|ref|YP_763598.1| hypothetical protein FTH_1088 [Francisella tularensis subsp.
holarctica OSU18]
gi|169656621|ref|YP_001428607.2| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|254367777|ref|ZP_04983798.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp.
holarctica 257]
gi|254369408|ref|ZP_04985420.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|290953920|ref|ZP_06558541.1| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica URFT1]
gi|295312720|ref|ZP_06803463.1| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica URFT1]
gi|89144271|emb|CAJ79554.1| hypothetical protein FTL_1115 [Francisella tularensis subsp.
holarctica LVS]
gi|115129774|gb|ABI82961.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253588|gb|EBA52682.1| hypothetical protein FTHG_01054 [Francisella tularensis subsp.
holarctica 257]
gi|157122358|gb|EDO66498.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|164551689|gb|ABU61651.2| putative aminomethyl transferase/glycine cleavage T-protein
[Francisella tularensis subsp. holarctica FTNF002-00]
Length = 248
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 22/210 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
+N ++V G FLQ + TAD+ L +A +G+I+ + I +
Sbjct: 6 TNFKILEVSGVDTKKFLQGLTTADLNGLSIDNDILLTAFANLKGRIISLCFVKFISNEKL 65
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L +++ ++L+ L Y + S V + F+
Sbjct: 66 LLSVEQEVFENLLAWLKKYGMFSKVSFNPNNDYALF------------------FTKTGF 107
Query: 126 LLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKG 183
L H + + + I + + N P + +D + + TKG
Sbjct: 108 LNHDILTKGSLTSEMTFEQVQKENIINKLATINA-ANFEKFLPAELDLDNVDKVVCYTKG 166
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
CY+GQEV++R+ ++ ++K ++ D+
Sbjct: 167 CYMGQEVIARMHYKAKLKKELAVVKSESDI 196
>gi|290959378|ref|YP_003490560.1| hypothetical protein SCAB_49691 [Streptomyces scabiei 87.22]
gi|260648904|emb|CBG72018.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 321
Score = 121 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 104/283 (36%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ I V G+ + +L ++T V LP A + IL+ G I + +
Sbjct: 42 VDLSHRGVIAVSGEDRLSWLHLLLTQHVSELPVGEATEALILSANGHIEHALYLV-DDGT 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T + R++L+ L K V + + + V+ + + E
Sbjct: 101 TVWAHAEPGTREALLAYLESMKFFYRVDVADRTDDVAVVHLPAGSITQIPAGTVVRETPY 160
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A + Y LR+ H + PH+ +
Sbjct: 161 GRDLFLPRADLESFAEKAGPAVGLLAYEALRVEHHRPRLGFE-TDHRTIPHELGW-IGTA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP G+ + D ++G
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPRGAELRLADDGPDGRKLGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + V+
Sbjct: 279 VTTSVRHHELGPVALALIKRNVPVDARLMADTTAAAQETVVEP 321
>gi|149918180|ref|ZP_01906672.1| LigA [Plesiocystis pacifica SIR-1]
gi|149820940|gb|EDM80347.1| LigA [Plesiocystis pacifica SIR-1]
Length = 330
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 109/290 (37%), Gaps = 38/290 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S++ +++ + V G+ A FLQ ++TADV L A + +LT +GK++ +
Sbjct: 13 LSALPRQDRAVVHVAGEDAARFLQGLLTADVSALTPGRAIPAGLLTVKGKLVSELWVLAT 72
Query: 61 ------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
+E L + +S+ L + + +V +E P G + + S +
Sbjct: 73 VDPDDEDETRLALALPAELAESVTKALDDHIIMDDVELET-PEPGAAALLLRFGSLSEAK 131
Query: 115 FIDE----RFSIADVLLHRTW--------------GHNEKIASDIKTYHELRINHGIVDP 156
RF+ A L W +D T+ R++
Sbjct: 132 VEAPAGVARFTCAHPLAGELWLGSTSALAEAAAALAAAGSQVADAPTFTRARVDQARPAW 191
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ P FP + ++ +S KGCY+GQE +SRI +R + + + + + +
Sbjct: 192 GFELTPDR-FPPEIGF--VDAVSYAKGCYLGQEPLSRIHNRGQVNRVMVRVMAMEPPSQA 248
Query: 217 GSP----ILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256
+ +L +D E+G LA+ R + A
Sbjct: 249 MADGPIALLAEDKEVGAWTSWAPSNDGSSAVGLAVIRRAHAKPGTQLRTA 298
>gi|313765561|gb|EFS36925.1| folate-binding protein YgfZ [Propionibacterium acnes HL013PA1]
gi|313815038|gb|EFS52752.1| folate-binding protein YgfZ [Propionibacterium acnes HL059PA1]
gi|314915800|gb|EFS79631.1| folate-binding protein YgfZ [Propionibacterium acnes HL005PA4]
gi|314917071|gb|EFS80902.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA1]
gi|314921347|gb|EFS85178.1| folate-binding protein YgfZ [Propionibacterium acnes HL050PA3]
gi|314931330|gb|EFS95161.1| folate-binding protein YgfZ [Propionibacterium acnes HL067PA1]
gi|314954847|gb|EFS99253.1| folate-binding protein YgfZ [Propionibacterium acnes HL027PA1]
gi|314958782|gb|EFT02884.1| folate-binding protein YgfZ [Propionibacterium acnes HL002PA1]
gi|315099949|gb|EFT71925.1| folate-binding protein YgfZ [Propionibacterium acnes HL059PA2]
gi|327454616|gb|EGF01271.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA3]
gi|327456688|gb|EGF03343.1| folate-binding protein YgfZ [Propionibacterium acnes HL083PA2]
gi|328755671|gb|EGF69287.1| folate-binding protein YgfZ [Propionibacterium acnes HL087PA1]
gi|328756452|gb|EGF70068.1| folate-binding protein YgfZ [Propionibacterium acnes HL025PA2]
Length = 313
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L V + ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMCFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|313835602|gb|EFS73316.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA2]
gi|314970303|gb|EFT14401.1| folate-binding protein YgfZ [Propionibacterium acnes HL037PA3]
gi|328908142|gb|EGG27901.1| putative glycine cleavage T-protein [Propionibacterium sp. P08]
Length = 313
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ LSN+ + V G + +L ++ + + + S +L+P G + L +
Sbjct: 35 SIELSNREVLAVSGVDRLGWLHSLTSQFLDDIEPGRTTTSLVLSPTGHVKH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V +E++P + + S +D +
Sbjct: 94 QTFWAWTEPGRGACLAAWLDSMRFMMRVDVELRPDM-TIRWVGHDVAVSEGVVLDSEVAG 152
Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+L + + + + LRI G+ D P++ + G L
Sbjct: 153 GREVILPDDSVAFSAVEPVGVLAWEALRIAAGVPRIGLD-TDDRTIPNEIGL---YGTHL 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVHNLGRPPRRLTLLQLDGSRAELPEVGAEIHAGGRRVGAMGSSANHY 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGITA 295
>gi|282898930|ref|ZP_06306913.1| Glycine cleavage T protein (aminomethyl transferase)
[Cylindrospermopsis raciborskii CS-505]
gi|281196184|gb|EFA71098.1| Glycine cleavage T protein (aminomethyl transferase)
[Cylindrospermopsis raciborskii CS-505]
Length = 327
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 99/296 (33%), Gaps = 47/296 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G+ + FL T ++ +L + ++T + + + + ED +
Sbjct: 27 SHWGRIEVTGEDRLRFLHNQSTNNLESLQPGSGCDTVMVTSTARTI-DLVTGYVLEDRVL 85
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVIIEI------------------------------- 94
L + ++R+ L+ L Y + V +
Sbjct: 86 LLVSPNRREFLLSWLDRYIFFADQVTLTDITEQTATFTLLGPESDTIISKLGVASLLSQP 145
Query: 95 ----QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
ING++ + + I R + + + + + LRI+
Sbjct: 146 DGHHISINGIIFAVGTGLAIPGYTLILPRAEK--QQIWQQLLDWGAVKLSDRHWEMLRIS 203
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G P+ + P + + +S KGCYIGQE ++R+ +++ I
Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQHLWGIKLK 260
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262
+ G+ I + ++G L + G L R + + T +
Sbjct: 261 N-CAQPGTIITISEEKVGKLTSYIETPEGHFGLGYIRAKAGGVGLTVEVGETQGEI 315
>gi|46518443|gb|AAS99703.1| At1g60990 [Arabidopsis thaliana]
Length = 423
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/304 (20%), Positives = 101/304 (33%), Gaps = 57/304 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS+ I+V G FL TA+ +L + +TP + + + I K
Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 164
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111
+ +L + + S+I+ L Y + V I+ + + +
Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 223
Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143
S DE F V + +T I
Sbjct: 224 LIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 283
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P + +A + N ISL KGCY GQE ++R+ + I++R
Sbjct: 284 WEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQR 340
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257
+ + GS I D ++G L G K L + A G +
Sbjct: 341 LCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK----KQAASIGNTV 395
Query: 258 TVHG 261
TV
Sbjct: 396 TVGE 399
>gi|79367480|ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana]
gi|145326078|ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana]
gi|186492130|ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana]
gi|51969110|dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana]
gi|332195639|gb|AEE33760.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195640|gb|AEE33761.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195641|gb|AEE33762.1| aminomethyltransferase [Arabidopsis thaliana]
Length = 432
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/304 (20%), Positives = 101/304 (33%), Gaps = 57/304 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS+ I+V G FL TA+ +L + +TP + + + I K
Sbjct: 116 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 173
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111
+ +L + + S+I+ L Y + V I+ + + +
Sbjct: 174 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 232
Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143
S DE F V + +T I
Sbjct: 233 LIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 292
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P + +A + N ISL KGCY GQE ++R+ + I++R
Sbjct: 293 WEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQR 349
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257
+ + GS I D ++G L G K L + A G +
Sbjct: 350 LCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK----KQAASIGNTV 404
Query: 258 TVHG 261
TV
Sbjct: 405 TVGE 408
>gi|297837379|ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/304 (19%), Positives = 101/304 (33%), Gaps = 57/304 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V LS+ I+V G FL TA+ +L + +TP + + + I K
Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLSEGQGCDTVFVTPTARTIDIAHAWIMK-- 164
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111
+ +L + + S+I+ L Y + V I+ + + +
Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGD 223
Query: 112 -----------------------NSSFIDERF-----SIADVLLHRTWGHNEKIASDIKT 143
S DE F V + +T I
Sbjct: 224 LIGQPYGNHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVA 283
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P + +A + N ISL KGCY GQE ++R+ + I++
Sbjct: 284 WEKLRITQGRPAPEREL-SKEYNVLEAGL--WNSISLNKGCYKGQETIARLMTYDGIKQW 340
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL 257
+ + GSPI+ D ++G L G L + A G +
Sbjct: 341 LCGLNLSAP-AEPGSPIIVDGKKVGKLTSYTRGREGSGHFGLGYIK----KQAASIGNTV 395
Query: 258 TVHG 261
T+
Sbjct: 396 TIGE 399
>gi|297158473|gb|ADI08185.1| hypothetical protein SBI_05065 [Streptomyces bingchenggensis BCW-1]
Length = 317
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 102/283 (36%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+P G I I + +
Sbjct: 38 VDLSHRGVVTVAGPDRLSWLHLLLTQHVSELPAGQATEALILSPHGHIEHALYIV-DDGE 96
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T ++ + L+ L K V + V+ + + E
Sbjct: 97 TTWAHVEPGTQGDLLAYLESMKFFYRVETADRTEEFAVVHLPAGSIAEAPEGAAVRETPY 156
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + + + Y LR+ + PH+ + + +
Sbjct: 157 GRDLFLPRADLESFAAASGPPAGVLAYEALRVEAHRPRLGLE-TDHRTIPHELGL-IGSA 214
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+++ +R + + LP G+P+ +G
Sbjct: 215 VHLHKGCYRGQETVARVENLGKPPRRLVFLHLDGSEVTLPGHGAPVRLASEGAAGRTLGF 274
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD A+ V V+
Sbjct: 275 VTTSARHHELGPIALALVKRNVPVDAALIVDTTAAAQEVVVEP 317
>gi|182437765|ref|YP_001825484.1| hypothetical protein SGR_3972 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778400|ref|ZP_08237665.1| folate-binding protein YgfZ [Streptomyces cf. griseus XylebKG-1]
gi|178466281|dbj|BAG20801.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658733|gb|EGE43579.1| folate-binding protein YgfZ [Streptomyces cf. griseus XylebKG-1]
Length = 321
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/283 (21%), Positives = 103/283 (36%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G+ + +L +IT V L A + IL+ G I + +
Sbjct: 42 VDLSHRGVVTVTGEDRLSWLHLLITQHVTDLAPNRATEALILSANGHIEHAMYLV-DDGT 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
T + ++ + LI L K R+ V I V L + + E
Sbjct: 101 TVWMHVEPGSQGELIAYLESMKFFYRAEVADRTGDIAVVHLPAGSIAEVPDGVVVRETPQ 160
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R T+ A+ I Y LR+ + PH+ +
Sbjct: 161 GRDLFLPRADLETYAAAHGPAAGILAYEALRVEGHRPRVGFE-TDHRTIPHELGW-IGGA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LP G+P+ + ++G
Sbjct: 219 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 279 ITTSARHHELGPIALALVKRNVAVDAELLAGDTAAAQETVVEP 321
>gi|119510709|ref|ZP_01629837.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia
spumigena CCY9414]
gi|119464663|gb|EAW45572.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia
spumigena CCY9414]
Length = 327
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/296 (18%), Positives = 100/296 (33%), Gaps = 47/296 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V + FL T D +L + +++ + + + + + ED +
Sbjct: 27 SHWGRIRVSDDDHLRFLHNQSTNDFQSLKPGQGCDTVMVSSTARTI-DLVSAYVLEDAVL 85
Query: 67 LEIDRSKRDSLIDKLLFYKL----------------------RSNVIIEI---------- 94
L S+R++L L Y +S+ I+E
Sbjct: 86 LLTSPSRREALFQWLDRYIFYADKVQLQDITNETSTFSLIGAKSDAIVEKLGAGAIIGKP 145
Query: 95 ----QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
Q ++GV+++ + I A L + + + + LRI
Sbjct: 146 YGSHQQVDGVMVAVGSGLAEPGYTLILPNSEKAQ--LWQQILELGAVELSDRAWDMLRIL 203
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G P+ + P + + IS KGCYIGQE ++R+ +++ I
Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--ISFNKGCYIGQETIARLNTYKGVKQYLWGIRLN 260
Query: 211 DDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGV 262
+ GS I D ++G L G L R +K + T V
Sbjct: 261 APV-EVGSAITVGDEKVGKLTSYTETANGHFGLGYIRSKAGGVGLKVQVGETEGEV 315
>gi|312796399|ref|YP_004029321.1| aminomethyltransferase family protein [Burkholderia rhizoxinica HKI
454]
gi|312168174|emb|CBW75177.1| Aminomethyltransferase family protein [Burkholderia rhizoxinica HKI
454]
Length = 324
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 36/198 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S I V G A FL +T D+ TL R + +P+G++L L+ + +
Sbjct: 76 LDQFSVIDVHGDDAASFLHGQLTNDIQTLEAGSVRLAGFCSPKGRLLATLLVWRAGDAVR 135
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---------------------------------VII 92
+L + L +L + LR+ V +
Sbjct: 136 ML-VSADLAAPLQKRLSMFVLRAKARLTNTTDDLAVVGFAGDVRAALSQCFEALPDGVHV 194
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+I G ++ + ++ R ++ L H + A + L I G
Sbjct: 195 KIDTACGELIRVPDANGVPRFLWVGPRAAVDAKLAALNATHRARRAVP-ALWDWLDIRAG 253
Query: 153 IVDPNTDFLPSTIFPHDA 170
N P
Sbjct: 254 EPRVNA-ATSEQFVPQMI 270
>gi|17231547|ref|NP_488095.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC
7120]
gi|17133190|dbj|BAB75754.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC
7120]
Length = 327
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 90/278 (32%), Gaps = 48/278 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN I+V + FL T D +L + ++T + + + S + D I
Sbjct: 27 SNWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCETVMVTSTARTI-DLVSSYVLNDAVI 85
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVII-EIQPI--------------------------- 97
L + S+R+ L+ L Y + V + +I
Sbjct: 86 LLVSSSRREFLLQWLDRYIFFADKVQLTDITDETATLSIIGPGSDAVVEKLGAGEIIGQP 145
Query: 98 --------NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
GVV + + I V + + + + + LRI
Sbjct: 146 HGNHITIDGGVVAAVGSGLASPGYTLILPVSQKQQV--WQQILDSGAVELSDRAWDTLRI 203
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P+ + P + + IS +KGCYIGQE ++R+ +++ I
Sbjct: 204 LQGRPAPDAELT-DDYNPLEVGLWQT--ISFSKGCYIGQETIARLNTYKGVKQHLWGIRL 260
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243
G I D ++G L G LA R
Sbjct: 261 NAP-AEIGDSINIGDEKVGKLTSYTETPDGYFGLAYIR 297
>gi|239930421|ref|ZP_04687374.1| hypothetical protein SghaA1_19516 [Streptomyces ghanaensis ATCC
14672]
gi|291438779|ref|ZP_06578169.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341674|gb|EFE68630.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 321
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + + +
Sbjct: 42 VDLSHRGVVTVTGPERLGWLHLLLTQHVSELPPHQATEALILSAHGHIEHALYLV-DDGE 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ +++LI L K V + + + V+ + E
Sbjct: 101 TVWAHVEPGTQEALIAYLESMKFFYRVEVADRTADIAVVHLPAGSIAEVPEGVVVRETPY 160
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + + I + LR+ + PH+ +
Sbjct: 161 GRDLFLPRADLESYAGKAGPPAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGGA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LP G+ I D IG
Sbjct: 219 VHLQKGCYRGQETVARVQNLGRPPRRLVFLHLDGSEVHLPTPGTEIRLADDGPDGRRIGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 279 VTTSARHHELGPVALALIKRNVPVDARLIAGETAAAQETIVEP 321
>gi|256824240|ref|YP_003148200.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547]
gi|256687633|gb|ACV05435.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547]
Length = 386
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 97/300 (32%), Gaps = 45/300 (15%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V L ++ + V G + +L +++T V L + + +LTPQG+I +
Sbjct: 71 LAVVDLGDRGVVTVSGPDRLSWLHSLLTQQVGDLAPGQSAEAMVLTPQGRIEHVLHLV-D 129
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---FID 117
+ T + D L L + V + + + V+ ++D
Sbjct: 130 DGATTWITTDPGHAAPLSSFLESMRFMLRVEVADRSADLRVVGEPHSAPGLPGEPPVWVD 189
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTY-------------------------HELRINHG 152
RT E + + LRI
Sbjct: 190 PWPGPVGATAVRTADDLEVHPGEGWAWREVVLPAEAVEEWVADRPLAGWWALEALRIAAW 249
Query: 153 IVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ PH+ +D L + L KGCY GQE V+R+Q+ +R + +
Sbjct: 250 RPSAQE--VDDRSIPHE--LDWLRTAVHLQKGCYRGQETVARVQNLGQPPRRLVFLHLDG 305
Query: 212 ---DLPPSGSPILTD--------DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+LP GS + + +G L V L + V + LT+
Sbjct: 306 SGHELPAVGSEVHSGAVAGDPASGKVVGRLTSVGRHHELGPIGLAVVKRSAPAEETLTIG 365
>gi|325964194|ref|YP_004242100.1| glycine cleavage system protein T (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
gi|323470281|gb|ADX73966.1| glycine cleavage system T protein (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
Length = 361
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 38/278 (13%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ V LS++ + V G + +L + + V L + +L+ QG+I +
Sbjct: 41 IAVVDLSSRGVVTVTGPDRLSWLNTLSSQQVAGLQPGQSSELLLLSVQGRIDFDARVIDD 100
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER 119
T+++ ++ ++ L + L K V I ++ VV + +S+ ++
Sbjct: 101 GGTTWLI-VEAAEAAPLAEFLNRMKFMLRVEIADVSADWAVVGTTKAVPEWSDLLVWEDP 159
Query: 120 FSIADVLLH--------------RTWGH------------NEKIASDIKTYHELRINHGI 153
+ + R W E+ + LR+
Sbjct: 160 WPHVGAGGYSYATVPEASHPGLERPWFEYLVPAAELVQRVAERPLAGTLAAEALRVAAWR 219
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
+ PH+ + L + L KGCY GQE +SR+ + +R + +
Sbjct: 220 PRIGAE-TDDKTIPHELDL-LRTAVHLAKGCYKGQETISRVHNLGHPPRRLVFLQLDGSQ 277
Query: 213 --LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
LP +GSP+L + ++GT+ V G ALA+ +
Sbjct: 278 HTLPQAGSPVLLGERKVGTVTSVAQHYEMGPVALAVIK 315
>gi|251771531|gb|EES52108.1| putative aminomethyltransferase [Leptospirillum ferrodiazotrophum]
Length = 339
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 97/298 (32%), Gaps = 59/298 (19%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67
+ + V G FLQ ++ DV R L+P+ +IL I + D +L
Sbjct: 23 RVLVSVSGDDRASFLQGLLCQDVAGQKTGTLRYGFFLSPKARILFDSWIGVLP-DRILLS 81
Query: 68 --EIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIA 123
+ ++ + L Y R+ + + + S + ++ + D
Sbjct: 82 PSLFSKEDEEAFLAHLKKYLFFRTKATLSSETGAFISASLVGPEALALATPLFDPEAEEE 141
Query: 124 DVL----------------------------------LHRTWGHNEKIAS------DIKT 143
V R G E++ S D
Sbjct: 142 GVRRLSEGGFAFLRPGIGAFDADTGGWIDLWLPAEKAGDRLKGLEERVLSRGGQRLDDTG 201
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R+ GI + + FP +A +D L +S KGCY+GQE V+R++ + + ++
Sbjct: 202 IEVYRVERGIPAVPFEL-NESHFPAEAGLDTL-AVSYNKGCYVGQEPVTRLKFQGQLSRK 259
Query: 204 PMIITGTDDLP-----PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
+ I P D+ E GTL +V G LA + D
Sbjct: 260 LVGIRLDGPFVSEVTLPRHLLASNDNTEAGTLTSLVSSVVCGGPVGLAYVKRGHWDSG 317
>gi|291303154|ref|YP_003514432.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
gi|290572374|gb|ADD45339.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
Length = 344
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 102/284 (35%), Gaps = 51/284 (17%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ + + G + +L +I T + L + +L+P G I + + + D L
Sbjct: 44 DRDLLVLSGPERLSWLHSITTQHLTELGDEQGTELLVLSPNGHIEHHAAVFSLG-DKLWL 102
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN------------SSF 115
+ + +L D L + + V IE + + +LS + +
Sbjct: 103 DTAPGQGAALRDFLAKMRFFAQVEIE-EVTDFALLSVTGPSDLAEPDTLEIPDAKFAAGS 161
Query: 116 IDERF-----------------------SIADVLLHR-----TWGHNEKIASDIKTYHEL 147
+ R D+L+ R T + Y L
Sbjct: 162 VPPRPSSIFAGRARPDGGWERRTDTVGRPTVDILVPRDQLDETIAALGLPLAGTWAYDTL 221
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PM 205
RI G+ D PH+ + L+ + L KGCY GQE V+R+ + + +
Sbjct: 222 RIPQGLPAFGVD-TDHRTIPHEVVSLLVTAVHLDKGCYRGQETVARVHNLGKPPRATSIL 280
Query: 206 IITGTDDLPP-SGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
+ GT++ PP G ++ D +G +G G ALA+ R
Sbjct: 281 HLDGTEEQPPKPGDEVMLDGRAVGRVGTAGRHYEDGMIALALLR 324
>gi|291566614|dbj|BAI88886.1| glycine cleavage system T protein [Arthrospira platensis NIES-39]
Length = 349
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 104/302 (34%), Gaps = 51/302 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ + FL T + + +T + + + + E+ +
Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFVTSTARNI-DLATAYMTEEAVL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS-------------- 111
L + ++R L+ L Y V ++ V S + S
Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLIGPESSSLLTKLGATIPDNFT 164
Query: 112 -NSSFIDE------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148
+ ++D+ R ++ L L + + + + +LR
Sbjct: 165 LGNHWVDQVANTSLRVAVGSGLATEGYTLIIPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G P+ + P +A + IS KGCYIGQE ++R+ +++R +
Sbjct: 225 ILQGRPAPDRELT-EDYNPLEAGL--WGDISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ G+ I +D ++G L + G L R A G+ +++ +
Sbjct: 282 LSG-FVEPGTVINVNDEKVGKLTSITETQEGWFGLGYIRT----KAGGAGLQVSLGDITA 336
Query: 265 KA 266
Sbjct: 337 TV 338
>gi|320009449|gb|ADW04299.1| folate-binding protein YgfZ [Streptomyces flavogriseus ATCC 33331]
Length = 321
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 100/284 (35%), Gaps = 23/284 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS++ + V G + +L ++T V L A + IL+ G I + +
Sbjct: 41 LVDLSHRGVVTVTGDDRLAWLHLLLTQHVSDLAPNQATEALILSANGHIEHALYLV-DDG 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERF 120
T + + + L+ L K V + + + V+ + + E
Sbjct: 100 TTVWMHAEPGTQGDLVAYLESMKFFYRVEVADRTEDFAVVHLPAGSIAEVPDGVAVRETA 159
Query: 121 SIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D+ L R + + I Y LR+ + PH+ + +
Sbjct: 160 HGRDLFLPRADLEPYAAAHGPVAGILAYEALRVEAYRPRLGFE-TDHRTIPHELGW-IGS 217
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228
+ L KGCY GQE V+R+ + +R + + LP G+P+ + ++G
Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLG 277
Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 278 FVTTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321
>gi|283779736|ref|YP_003370491.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
gi|283438189|gb|ADB16631.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
Length = 327
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/312 (18%), Positives = 107/312 (34%), Gaps = 55/312 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+++ I+V G + FL TAD+ L + QGK + + + E
Sbjct: 23 ADLSSRTRIRVTGSDRVGFLHGFCTADIKKLSPLAGCEAFFTNHQGKAVGHGYLYSR-EQ 81
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSF--IDER 119
+ I++ + + L + L + + +V E Q ++L+ F +
Sbjct: 82 SLIIDTTAGQFEKLSEHLRRFAITEDVEFADETQSTCELLLAGPTAPATIEQLFKVVAPT 141
Query: 120 FSIADVLLHRTWGHNEKIASDI---KTY-----------------------------HEL 147
+ V + E + +D+ Y L
Sbjct: 142 ERLESVRASSSEMSLEIVKTDLIPETAYLLLAPTASKQILLDLLTTAGVTLASGELIEAL 201
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI + + P + D L IS KGCY+GQE V+RI + + +
Sbjct: 202 RIEGKTPAYGLEI-DESTLPQEMNRDTL-AISFKKGCYLGQETVARIDALGHVNRVLTKL 259
Query: 208 TGTDD-LPPSGSPI-----LTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGM 255
+ + PP+G+P+ + ++G++ + ALA+ R K G
Sbjct: 260 SLPGEIAPPTGTPLVMRDETGTEKQVGSIASIAYSPATKQLTALAVLR----RSGAKTGT 315
Query: 256 ALTVHGVRVKAS 267
LT S
Sbjct: 316 QLTASNAAAVVS 327
>gi|284051077|ref|ZP_06381287.1| glycine cleavage T protein (aminomethyl transferase) [Arthrospira
platensis str. Paraca]
Length = 349
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 104/302 (34%), Gaps = 51/302 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ + FL T + + +T + + + + E+ +
Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFVTSTARNI-DLATAYMTEEAVL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQ---------------EHTF 110
L + ++R L+ L Y V ++ V S +H
Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLIGPESSSLLTKLGATIADHLT 164
Query: 111 SNSSFIDE------RFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148
+ ++D+ R ++ L L + + + + +LR
Sbjct: 165 LGNHWVDQVANTSLRVAVGSGLATEGYTLIIPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G P+ + P +A + IS KGCYIGQE ++R+ +++R +
Sbjct: 225 ILQGRPAPDRELT-EDYNPLEAGL--WGDISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ G+ I +D ++G L + G L R A G+ +++ +
Sbjct: 282 LSG-FVEPGTVINVNDEKVGKLTSITETQEGWFGLGYIRT----KAGGAGLQVSLGDITA 336
Query: 265 KA 266
Sbjct: 337 TV 338
>gi|322499496|emb|CBZ34569.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 391
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 25/177 (14%)
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+ + ++ TW S Y L + GI + F + P + +D L G
Sbjct: 205 PSWFLRRCVVPATWA---PPFSSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKG 261
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD----------- 224
+S KGCY+GQE+ R + RKR + + PP+ I +
Sbjct: 262 VSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVG 321
Query: 225 --------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272
+IG + V G+ + + R+ VD A + L + G V++ P W+
Sbjct: 322 EPLYSAAKEKIGEVTGVCGQVGIGLFRLRYVDKATRTVPGLQLKDGTPVQSHLPDWW 378
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 13/163 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
L ++ ++V G A FLQ I T D+ L + L G++L +
Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ + ++++ L D L K+R V I+ VVL+ E TF+++ +
Sbjct: 69 HEGQASILVDVHERSAAGLFDHLTEMKMRKKVHIDDVGKELVVLA-TLEETFADAQRSSD 127
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
S D + + + R DP D L
Sbjct: 128 SASGCDARASSVTPLSPETLEE-------RHTECFPDPRNDAL 163
>gi|146078890|ref|XP_001463632.1| hypothetical protein [Leishmania infantum JPCM5]
gi|321399563|emb|CBZ08750.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 390
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 25/177 (14%)
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+ + ++ TW S Y L + GI + F + P + +D L G
Sbjct: 204 PSWFLRRCVVPATWA---PPFSSPDPYTTLLYSRGIGEGPDVFKHNKSLPFEGNLDFLKG 260
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDD----------- 224
+S KGCY+GQE+ R + RKR + + PP+ I +
Sbjct: 261 VSFHKGCYVGQELTHRTHVMLVTRKRTVPLHFGPASVDPPAAGAITDEGTVTKTRPVEVG 320
Query: 225 --------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV-HGVRVKASFPHWY 272
+IG + V G+ + + R+ VD A + L + G V++ P W+
Sbjct: 321 EPLYSAAKEKIGEVTGVCGQVGIGLFRLRYVDKATRTVPGLQLQDGTPVQSHLPDWW 377
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 13/163 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
L ++ ++V G A FLQ I T D+ L + L G++L +
Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLRELHPAGSMYGCFLYFTGRVLCDAHLYQCKQV 68
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ + ++++ L D L K+R V I+ VVL+ E TF+++ +
Sbjct: 69 HEGQASILVDVHERSAAGLFDHLTEMKMRKKVHIDDVGKELVVLA-TLEETFADAQRSSD 127
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
S D + + + R DP D L
Sbjct: 128 SASGCDARASSVTPLSPETLEE-------RHTECFPDPRNDAL 163
>gi|256371884|ref|YP_003109708.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331]
gi|256008468|gb|ACU54035.1| folate-binding protein YgfZ [Acidimicrobium ferrooxidans DSM 10331]
Length = 274
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
++V G+ A +LQ ++ DV TL S +L G ++ + + ++ +D F L +
Sbjct: 29 VQVTGRDAARYLQGQLSQDVSTLKADGQGAISVLLGVDGHLVTWLRVRRLADDAFWLVVA 88
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ + + +L +++R+ IE+ P + L +D+ D
Sbjct: 89 EAHGERVRQRLEHFRIRTQATIELLPGH---LHVRPPEGLEPLWPLDQDAPFVDA----- 140
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
+D+ +H R+ G DP +D + + H + +S TKGCY GQE+
Sbjct: 141 -------PADLARFHAERLVAGAFDPASDLVDG-LLAHGVPTLVERAVSFTKGCYTGQEL 192
Query: 191 VSRIQHRNIIRK-RPMIITGTDDLP-PSGSPILTDDIEIGTLGV--VVGKKA 238
V+R R + + + + G+ ++ ++ G + VVG +
Sbjct: 193 VARTSSRGAPAPIGLVALELAEPIAVAPGTALVVGGVDAGAITSAAVVGDRG 244
>gi|300742104|ref|ZP_07072125.1| folate-binding protein YgfZ [Rothia dentocariosa M567]
gi|300381289|gb|EFJ77851.1| folate-binding protein YgfZ [Rothia dentocariosa M567]
Length = 402
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 98/281 (34%), Gaps = 47/281 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G +L ++ + + + +R +L+PQG+I Y + +
Sbjct: 68 SSLGIVRVSGPDRASWLTSLASQILTDMNPGDSREFLLLSPQGRIE-YAPAAVEDGQALW 126
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------FI 116
L ++ ++ + L D L K V IE + V+ + + +
Sbjct: 127 LIVEGAQAEPLTDYLNRMKFMLRVDIENMSGDYAVIETARNPRGEQGAIHPVFADAPIWR 186
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTY------------------------HELRINHG 152
D ++ + H + + +D + Y LRI
Sbjct: 187 DPWTALVEGGYHYSATPDAHPGTDYERYLSIIPRDKLTTLTESAQLAGVWAAEALRIEAW 246
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
T+ + P + + KGCY GQE V+R+ + +R + +
Sbjct: 247 RPRAGTEI-DNKTIPQELDYTRT-AVHFEKGCYKGQETVARVHNLGRPPRRLVFLDLDGS 304
Query: 213 ---LPPSGSPILTDDIE--IGTLGVV-----VGKKALAIAR 243
LP +GS + + +G + V G ALA+ +
Sbjct: 305 EHTLPAAGSELFVESKPRAVGRITSVALHHEAGPIALAVIK 345
>gi|50955392|ref|YP_062680.1| hypothetical protein Lxx18340 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951874|gb|AAT89575.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 370
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 113/306 (36%), Gaps = 44/306 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS++S + + G + +L + + + L + + +L G+++ + + +
Sbjct: 39 AIVDLSDRSVLSIAGPDRLSWLHTLTSQSLTGLRPGESSETLLLDATGRLVYAVRLIE-D 97
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------IQPINGVVLS 103
+T L +DR + + L+ L + V + + NG L
Sbjct: 98 GETLWLLVDRPEAEGLLGWLDSMRFLLRVEVADRTAAFATIGTLGEPPLPVAAPNGAPLV 157
Query: 104 WNQE--------HTFSNSSFIDERFSIADVLLHRTW--------GHNEKIASDIKTYHEL 147
W+ H ++ +S ++ L+ R G E + L
Sbjct: 158 WHDPWHAVTPGGHQYARGDHPGVGWSWSERLVPRDALASIASRAGSGELTVAGTLAADAL 217
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI T+ PH+ +D L + L+KGCY GQE V+++ + +R ++
Sbjct: 218 RIAAWRPRFATE-ADERTIPHE--LDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRLVM 274
Query: 207 ITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH--G 261
+ P G+ + D +GT+ + L + V A LTV G
Sbjct: 275 LHLDGSEGVHPARGAEVSLDGKPVGTVTLSALHYELGPIALAVVKRATPAAATLTVDALG 334
Query: 262 VRVKAS 267
V A+
Sbjct: 335 TPVPAA 340
>gi|45185401|ref|NP_983118.1| ABR170Wp [Ashbya gossypii ATCC 10895]
gi|74695271|sp|Q75D53|CAF17_ASHGO RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|44981090|gb|AAS50942.1| ABR170Wp [Ashbya gossypii ATCC 10895]
Length = 462
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 64/420 (15%), Positives = 118/420 (28%), Gaps = 158/420 (37%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITA----------------DVLTLPYKIA------- 39
S L ++FI V G A+ FL +ITA DV + +
Sbjct: 29 SCRLPGKAFISVRGPDAVKFLNGLITAKLAPEVVKKSLTTVNPDVREVERHPSISGFDLR 88
Query: 40 ----------------------RGSAILTPQGKILLYFLISKIE---EDT-------FIL 67
SA L +GK+L ++ D ++L
Sbjct: 89 RGNWGIYKEGTRARGPYISRFGTYSAFLNSKGKVLTDTVVYPAPLGLPDGAAAKYPEYLL 148
Query: 68 EIDRSKRDSLIDKLLFYKL-------RSN------VIIE--IQPINGVVLSW-------- 104
+ D + L L +KL R + V I+ P SW
Sbjct: 149 QCDAIFVEPLEHLLQRHKLLQRVKIARRDDLSVWHVAIDMDAYPEWEQSFSWRSEFWKPM 208
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTW---------------------------- 131
+ FI + F+ A+ L +
Sbjct: 209 VSLHNQDDALRFARWFIAQFFAGAEGRLVGAYYDTRNVDPTKKSNIFYMVTTGDVDDIAT 268
Query: 132 --------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD-LLNGISLTK 182
++ R+ G+++ ++ + P + D + +S K
Sbjct: 269 LFSPQMVSSKTTAVSVPYTEVRRARLRRGVLEGVSELRSEAVLPLEVNFDLYEDAVSFDK 328
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMII--------------------------TGTDDLPPS 216
GCY+GQE+ +R ++RKR + + P+
Sbjct: 329 GCYVGQELTARTHATGVLRKRCAPVIVSNSASLDTLATSSRLDLYTDYVIPAASTSPSPT 388
Query: 217 GSPILTDD------IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
SP + + IG L V G +A+ ++ ++ + + + + P
Sbjct: 389 NSPFASQNPRPRKKQPIGKLLCVDGTDGVALVKLIYIERSR------SCGSIECYVTHPE 442
>gi|239996335|ref|ZP_04716859.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
macleodii ATCC 27126]
Length = 348
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 57/291 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LSN I + G+ A +LQ IT ++ L AR A +GK +++ + +
Sbjct: 16 VKLSNAMIISLEGEQADSYLQGQITVNINKLTENTARHFAHCDNKGKTWSTGYVTRHQ-N 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII--------------------EIQPINGVVLS 103
+L + + +L Y + S V I E++ + S
Sbjct: 75 KLLLVTNEDAGSHSLAQLNKYGVFSKVDILDDTRTYSAYFISLDAVKTNEVKAALSQLFS 134
Query: 104 WNQEHTFSNSSFID----------------ERFSIADVLLHRTWGHNEKIASDIKT---- 143
N+ S D S +++ ++I S I+
Sbjct: 135 ENEVERLLESDTPDNGSLEKVESEHGVAYFANTSCKGIIVLLDDNGAKQINSLIEAQTLS 194
Query: 144 ------YHELRIN--HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ ++I H +V + + P + LNGI KGCY+GQEVV+R +
Sbjct: 195 CYPQTVFDAIQIQSVHALVQGDA---VAEYVPQMINVQALNGIDFDKGCYMGQEVVARTR 251
Query: 196 HRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
++ ++ G + + ++G + GK L +A +D
Sbjct: 252 FLGKNKRAAYSFKLEGNVNIKPGDAL---EKQLGENWRIAGKI-LNVASLD 298
>gi|163848163|ref|YP_001636207.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222526066|ref|YP_002570537.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
gi|163669452|gb|ABY35818.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222449945|gb|ACM54211.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
Length = 329
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 88/278 (31%), Gaps = 45/278 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G+ L + T + L +A+ TP G+++ + + D +
Sbjct: 22 SDRGRLWMRGRDRAALLHRLSTNHIERLQPGQGTLTALTTPIGRMIDLLRVYALP-DALL 80
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPIN----GVVLSWNQEHTFSNSSFID---- 117
LE +++ L V + GV + + +D
Sbjct: 81 LETGDGHGPAILRHLRKNIFFNDQVTVADASAELGQIGVYGPQASQVIQTIGLSVDLPLH 140
Query: 118 --------------ERFSIADVLLHRTWGHN-------------EKIASDIKTYHELRIN 150
R + + + D T +RI
Sbjct: 141 SIATGDWNGHQVLVARCEPLGGDGYTLYPPATQTTTLLTALTDEGAVPLDSHTAEVVRIE 200
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
HG + P +A DL +S KGCY+GQE+++R++ R I K + +
Sbjct: 201 HGYPRFKHEITLD-YIPLEA--DLWRAVSFQKGCYVGQEIIARMESRGRIAKLLCGLRLS 257
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
+ + D E GTL G LA R
Sbjct: 258 AAPEAVPAAVTVDGKEAGTLTSAAYSPRYGWIGLAYVR 295
>gi|108803026|ref|YP_642963.1| glycine cleavage T protein [Rubrobacter xylanophilus DSM 9941]
gi|108764269|gb|ABG03151.1| glycine cleavage T protein (aminomethyl transferase) [Rubrobacter
xylanophilus DSM 9941]
Length = 309
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 42/289 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G+ + L+AI+T + + +L P+G+I + + + ++ +
Sbjct: 29 LRLSGRDPLGLLEAILTNSLPG-EEDRGAYALLLDPKGRIQADLRVVRHAGEVLVVAGPQ 87
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP--INGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
S R ++ + L Y S V +E + G+ E S+ + + LL
Sbjct: 88 SAR-AVREILRRYAPFSRVAVEETGFGVLGLYGPRAAELAGLRSALPEHACARLGALLAV 146
Query: 130 TWGHNEKIASDIKTYHEL-----------------------RINHGIVDPNTDFLPSTIF 166
I EL RI G+ TDF P F
Sbjct: 147 GVAVPVPGVDLIGAPEELQRARERLRSAGAVAATEEEYEAARIAAGVPRFGTDFTPEN-F 205
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR---KRPMIITGTDDLPPSGSPILTD 223
P +A + L +S KGCY GQE V+R+++R +R ++ +GT PP+ IL
Sbjct: 206 PAEAGL-LERAVSFEKGCYPGQETVARMRYRGHPNRTLRRLLVASGTPPAPPA--EILQG 262
Query: 224 DIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
D GTL V A+ + + L+ G ++ +
Sbjct: 263 DRRAGTLTSVSPLPSEEGVVFALGYLRR---GADPEGPLSAGGAILRVA 308
>gi|21222578|ref|NP_628357.1| hypothetical protein SCO4181 [Streptomyces coelicolor A3(2)]
gi|256786350|ref|ZP_05524781.1| hypothetical protein SlivT_17794 [Streptomyces lividans TK24]
gi|289770240|ref|ZP_06529618.1| glycine cleavage T protein [Streptomyces lividans TK24]
gi|8388730|emb|CAB94085.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289700439|gb|EFD67868.1| glycine cleavage T protein [Streptomyces lividans TK24]
Length = 321
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + IL+ G I + +
Sbjct: 42 VDLSHRGVLAVTGDDRLSWLHLLLTQHVSDLPAGQATEALILSANGHIEHALYLV-DDGT 100
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T ++ +++LI L K V + + + ++ S+ + E
Sbjct: 101 TVWAHVEPGSQEALIAYLESMKFFYRVEVADRTADTALVHLPAGSIAQAPASAVVRETPY 160
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
D+ L R + A+ I + LR+ + PH+ +
Sbjct: 161 GRDLFLPREELEAFAAQAGPAAGILAHEALRVEQHRPRLGFE-TDHRTIPHELGW-IGTA 218
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+Q+ +R + + LPP+G+ I D +IG
Sbjct: 219 VHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPPNGAEIRLADDGPDGRKIGF 278
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + V+
Sbjct: 279 VTTSVRHHELGPVALALVKRNVPVDARLMAEETAAAQETVVEP 321
>gi|163839721|ref|YP_001624126.1| glycine cleavage system T protein (aminomethyltransferase)
[Renibacterium salmoninarum ATCC 33209]
gi|162953197|gb|ABY22712.1| glycine cleavage system T protein (aminomethyltransferase)
[Renibacterium salmoninarum ATCC 33209]
Length = 361
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 29/279 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + + V G+ + +L + + DV L + +L+ QG+I + E ++
Sbjct: 52 SQRGVVTVSGQDRLTWLTTLSSQDVSRLKAGDSAELLLLSVQGRIEYDIHVLDDGETAWL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLS----------WNQEHT------ 109
L ++ ++ L L K V + E+ GV+ S W
Sbjct: 112 L-VEAAEASPLAAWLNSMKFMLRVEVNEVSEEWGVLASTAALLDGQPVWQDPWPGVVPGG 170
Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ F + T E + LRI +
Sbjct: 171 FAYSSQEGHPGVDRPWFEYLVPIEKLTELIAELPLAGSLAAEALRIAAWRPRWGAE-TDE 229
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPI 220
PH+ + + + L+KGCY GQE V+R+ + +R + + LP GS I
Sbjct: 230 KTIPHELDL-MRTAVHLSKGCYKGQETVARVHNLGHPPRRLVFLQLDGSQHTLPVVGSAI 288
Query: 221 LTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+ ++G L V + + + LTV
Sbjct: 289 QNGERQVGLLTSVAQHYEMGPIGLAVIKRNTDANAELTV 327
>gi|167738163|ref|ZP_02410937.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 14]
gi|167815349|ref|ZP_02447029.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 91]
Length = 170
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFD 151
>gi|311112022|ref|YP_003983244.1| folate-binding protein YgfZ [Rothia dentocariosa ATCC 17931]
gi|310943516|gb|ADP39810.1| folate-binding protein YgfZ [Rothia dentocariosa ATCC 17931]
Length = 402
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 47/281 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G +L ++ + + + +R +L+PQG+I Y + +
Sbjct: 68 SSLGVVRVSGPDRASWLTSLASQILTDMNPGDSREFLLLSPQGRIE-YAPATVEDGQALW 126
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------FI 116
L ++ ++ + L D L K V IE + V+ + + +
Sbjct: 127 LIVEGAQAEPLTDYLNRMKFMLRVDIENMSGDYAVIETARNPRGEQGAIHPSFADALIWR 186
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTY------------------------HELRINHG 152
D ++ + H + + D + Y LRI
Sbjct: 187 DPWTALVEGGYHYSATPDAHPGIDYERYLSIIPREKLATLTEGAQLAGVWAAEALRIEAW 246
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
T+ + P + + KGCY GQE V+R+ + +R + +
Sbjct: 247 RPRAGTEI-DNKTIPQELDYTRT-AVHFEKGCYKGQETVARVHNLGHPPRRLVFLDLDGS 304
Query: 213 ---LPPSGSPILTDDIE--IGTLGVV-----VGKKALAIAR 243
LP +GS + + +G + V G ALA+ +
Sbjct: 305 EHTLPAAGSELFVEGKPRAVGRITSVALHHEAGPIALAVIK 345
>gi|314928680|gb|EFS92511.1| folate-binding protein YgfZ [Propionibacterium acnes HL044PA1]
Length = 313
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 101/272 (37%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ LSN+ + V G + ++ ++ + + + S +L+P G + L +
Sbjct: 35 SIELSNREVLAVSGVDRLGWVHSLTSQFLDDIEPGRTTTSLVLSPTGHVKH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L + V +E++P + + S +D +
Sbjct: 94 QTFWAWTEPGRGACLAAWLDSMRFMMRVDVELRPDM-TIRWVGHDVAVSEGVVLDSEVAG 152
Query: 123 AD--VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+L + + + + LRI G+ D P++ + G L
Sbjct: 153 GREVILPDDSVAFSAVEPVGVLAWEALRIAAGVPRIGLD-TDDRTIPNEIGL---YGTHL 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVHNLGRPPRRLTLLQLDGSRAELPEVGAEIHAGGRRVGAMGSSANHY 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGITA 295
>gi|167619727|ref|ZP_02388358.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis Bt4]
Length = 177
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGADAATFLHGQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADAGGTHVAVGFAGDVRAALSGIFD 151
>gi|315101738|gb|EFT73714.1| folate-binding protein YgfZ [Propionibacterium acnes HL046PA1]
Length = 313
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 99/272 (36%), Gaps = 21/272 (7%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
SV LSN+ + + G + +L + + + + S +L+P G + L +
Sbjct: 35 SVELSNREVLAISGVDRLGWLHSFTSQFLDGMEPGRTTTSLVLSPTGHVEH-VLHGVDDG 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
TF + + L L V + ++P V + + S+ +D +
Sbjct: 94 QTFWAWTEPGRGADLAAWLDSMCFMMRVEVALRPDMTVRW-FGHDFAVSDGVVLDSEVAG 152
Query: 123 ADVLLHRTWGHNEKIASDIK--TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
++ A + + LRI GI D P++ + G +
Sbjct: 153 GHEVILPVDAEIPGDADPVGVLAWEALRIAAGIPRIGLD-TDDRTIPNEIGL---YGTHM 208
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE V+R+ + +R ++ +LP G+ I +G +G
Sbjct: 209 DKGCYRGQETVARVYNLGRPPRRLTLLQLDGSRAELPEVGADIHAGGRRVGAMGSSANHG 268
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G LA+ R + G+ L V G+
Sbjct: 269 VDGPIGLALVR-----RGVDVGLELEVDGIAA 295
>gi|219848165|ref|YP_002462598.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
gi|219542424|gb|ACL24162.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
Length = 322
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 94/297 (31%), Gaps = 45/297 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G+ L + T + L + + TP G+++ + + D +
Sbjct: 22 SDRGRLWMRGRDRASLLHRLSTNHIARLQPGQGTLTVLTTPIGRMIDLLRVYALP-DALL 80
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPIN------------GVVLSWNQEHTFSNS 113
LE ++ L V + +V +
Sbjct: 81 LETGPRHGGPILRHLRKNIFFNDQVTVADAGSELGQIGIYGPQAGEIVQALGLPMVAERY 140
Query: 114 SFIDERFSIADVLLHR-----------------------TWGHNEKIASDIKTYHELRIN 150
+ ++ VL+ R + +T +RI
Sbjct: 141 GIVAAQWGETPVLIARCEPLGGDGYTLYPPVAQTEALLAALVAAGAAPLNAETAEVVRIE 200
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
HG + P +A DL +S KGCY+GQE+++R++ R I K+ + T
Sbjct: 201 HGYPRFGHEITLD-YIPLEA--DLWRAVSFQKGCYVGQEIIARMESRGRIAKQLRGLRLT 257
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGV 262
+P+ D E+G L G LA R D +A V V
Sbjct: 258 ALPTIVPTPLTVDGKEVGVLTSAAHSPRYGLIGLAYVRSSYADDGTTVLVADQVANV 314
>gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
Length = 376
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 54/301 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L +I+ V LP + +L G+I + +++ ++ T
Sbjct: 49 SHREIITVTGEDRLSWLHLVISQHVTELPEGEGTEALVLDSHGRIDAHMVLAYVDG-TVY 107
Query: 67 LEID-----------RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L+ D ++ L+D K S V I +L+ + S
Sbjct: 108 LDTDPGAQATTALPKGGEKQPLLDYFEAMKFWSKVDIRDATDEWALLTLLGPEVSTMLSR 167
Query: 116 ID-----------------------ERFSIADVLLHRT--------WGHNEKIASDIKTY 144
D S D+L+ R+ + +
Sbjct: 168 FDIELDTRPYAVTRFSGGIARRMPWPGPSSVDLLIPRSELVDWWTKLTDAGARPAGTWAF 227
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ D PH+ + + + KGCY GQE V+++ + +
Sbjct: 228 DALRVESLRPKLGVD-TDERTIPHEVNW-IGSAAHVAKGCYRGQETVAKVHNVGKPPRNM 285
Query: 205 MIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGM 255
+++ P +G P+L D +G +G V G ALA+ R D + G
Sbjct: 286 VLLHLDGSQEIYPETGDPVLRGDRTVGRVGSVAQHHELGPIALALLKRSTPADAELLAGT 345
Query: 256 A 256
Sbjct: 346 E 346
>gi|332711903|ref|ZP_08431833.1| folate-binding protein YgfZ [Lyngbya majuscula 3L]
gi|332349231|gb|EGJ28841.1| folate-binding protein YgfZ [Lyngbya majuscula 3L]
Length = 355
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 96/285 (33%), Gaps = 45/285 (15%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ IKV G + +L T D T + +T + + + I D+ +L
Sbjct: 50 HWGLIKVSGDDRLRYLHNQSTNDFQTRRPGQGCETVFVTSTARTI-DLATAYILADSVLL 108
Query: 68 EIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSW---------------------- 104
+ + R +++ L Y V ++ + VLS
Sbjct: 109 LVSPNCRQQIMEWLDRYIFPMDQVALQDVSDHHAVLSLIGPVSDALLTGLGVEISGEDAS 168
Query: 105 --------NQEHTFSNSSFIDERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRINH 151
NQ S +++ + +T I + + +LRI
Sbjct: 169 HQQLMLGDNQVRIAVGSCLAMPGYTVICPAENAAQVWQTLTTAGAIPIGDRVWEQLRIQQ 228
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G P + P +A + IS +KGCYIGQE ++R+ +++R I +
Sbjct: 229 GRPAPGHELT-EDYNPLEAGL--WQSISFSKGCYIGQETIARLNTYKGVKQRLWGIRLSA 285
Query: 212 DLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIK 252
GS I D ++G L + G LA R +K
Sbjct: 286 PT-DLGSVITVDGEKVGKLTSLTETDQGVFGLAYIRTKAGGAGLK 329
>gi|167719160|ref|ZP_02402396.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei DM98]
Length = 200
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L + V G A FL +T DV L AR + +P+G++L FL + D
Sbjct: 39 AALEQFGIVDVTGADAATFLHGQLTNDVEHLDAASARLAGYCSPKGRLLASFLAWRAGHD 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 99 VRLL-VSKDVQPAVQKRLSMFVLRAKAKLADASGALVAIGFAGDVRAALSGIFD 151
>gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 364
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/300 (19%), Positives = 100/300 (33%), Gaps = 46/300 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
L+ + + L+D L S+V + V+ + + + ++
Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158
Query: 115 FIDERFSIADVLLHRTWGHNEK---------------------IASDIKTYHELRINHGI 153
+ R + G E + + Y R+
Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVLPGGVWAYEAHRVAARR 218
Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262
G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V
Sbjct: 278 GSVDRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337
>gi|152964852|ref|YP_001360636.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus
radiotolerans SRS30216]
gi|151359369|gb|ABS02372.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus
radiotolerans SRS30216]
Length = 360
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 96/283 (33%), Gaps = 47/283 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS++ +++ G + +L +I + + L ++ + +L+PQG++ + + D
Sbjct: 49 ADLSHRGVLRLSGPDRLSWLHSITSQALTGLGAGVSTETLVLSPQGRVEHALHLV-DDGD 107
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-----------------WNQ 106
+ ++ D+L L + V I VL W
Sbjct: 108 ATWITVEPGSVDALRTWLERMRFALRVEIADVSAEFAVLGEPSRSAESSLGPVWVDPWPG 167
Query: 107 EHTFSNSSFIDERF--------------SIADVLLHRT---WGHNEKIASDIKTYHELRI 149
+ D +VL+ R + + LR+
Sbjct: 168 ATPANEGGSADTASYSAVPTLEHPGTERPWREVLVPRAELVAAVAGRRLAGTWATEALRV 227
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ PH+ +D L + L KGCY GQE V+++ + +R ++
Sbjct: 228 EAWRPRLGLE-TDERSIPHE--LDWLRTAVHLHKGCYRGQETVAKVHNLGRPPRRLALLH 284
Query: 209 GTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
DLP G ++ D +G + G ALA+ +
Sbjct: 285 LDGSSHDLPAHGDDVVHGDRRVGFVTTAARHHELGPVALAVLK 327
>gi|156743472|ref|YP_001433601.1| glycine cleavage T protein [Roseiflexus castenholzii DSM 13941]
gi|156234800|gb|ABU59583.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
castenholzii DSM 13941]
Length = 337
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/298 (17%), Positives = 96/298 (32%), Gaps = 48/298 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ L + T D+ L +A+ TP G+I+ L +DT ++
Sbjct: 41 IFMRGRDRAALLHRLSTNDIERLNPGEGTLTALTTPIGRII-DLLTVHALDDTLLIVTSP 99
Query: 72 SKRDSLIDKLLFYKLR-SNVIIEIQP---INGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
+ + L V +E V T + + + +
Sbjct: 100 DQGPPVFGHLRRNIFFNDQVTLEPAGRTYTQVAVYGPQAARTLAELIGAEIHLPLHGITP 159
Query: 128 HRTWGHNEKIA---------------------------------SDIKTYHELRINHGIV 154
G + +A D +T LR+ G
Sbjct: 160 ATLAGVSLLLARRKPIGGDSFTLYVPSDGADAVYAALLTAGAAALDAETLDVLRVEQGYG 219
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ P + + L+ +S TKGCY+GQE+++R++ R + KR + + +
Sbjct: 220 AFGREL-SQEYIPLETGL--LDAVSFTKGCYVGQEIIARMESRGRLAKRLCGLRLSHPVV 276
Query: 215 PSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG-MALTVHGVRVKA 266
+ + D + G L V G ALA R + G T G ++
Sbjct: 277 AP-AKLQVDGRDAGDLTSAVVSPRFGPIALAYVRTAYAEPGTVVGVDGFTATGRVIEL 333
>gi|320103031|ref|YP_004178622.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
gi|319750313|gb|ADV62073.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
Length = 388
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/307 (19%), Positives = 95/307 (30%), Gaps = 68/307 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++++ I G L + T ++ L + TPQGK L + E D +
Sbjct: 32 TDRTRIAFTGADRAKSLHNLTTQNITALKPGQGAEGFVTTPQGKTLALVTVHVDERDPIL 91
Query: 67 -LEIDRSKRDSLIDKLLFY-KL--------------------RSNVIIEIQPINGVVL-S 103
+ D S+ Y L R+ I+E + S
Sbjct: 92 WVRSDAGVAGSVSSHFSKYCALDETTWTDHSASTTEFLILGPRAEEILERVGLRSTAGGS 151
Query: 104 WNQEHTFSNSS-----------FIDERFSIADVLLH-----------------------R 129
W + + D S+ L+ R
Sbjct: 152 WAELMASPEGAIRNATLEGLAEVADPALSLPPRLIRERFGAHHGVTILTGLREAVTIRSR 211
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
E LRI G+ D + P + D I+ TKGCY+GQE
Sbjct: 212 LAERAECAPMPPAKLEALRIEIGLPRFGVDLT-ADHLPQEFDRDA-RAINFTKGCYLGQE 269
Query: 190 VVSRIQHRNIIRKRPMIITG---TDDLPPSGSPILTDDIEIGTLGVVV------GKKALA 240
V+R+ + K + LPPSG+ ++ DD +GTL V G L
Sbjct: 270 TVARLDALGHVNKMLRHLKFHSVNAPLPPSGTTLMKDDRPVGTLTSVARLVDGSGVLGLG 329
Query: 241 IARIDKV 247
+ RI +
Sbjct: 330 MVRIKQA 336
>gi|307153085|ref|YP_003888469.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822]
gi|306983313|gb|ADN15194.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822]
Length = 357
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 103/305 (33%), Gaps = 50/305 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G + FL T ++ +L + + G+ L + + +++
Sbjct: 46 SHWGLIQLKGNERLRFLHNQTTNNINSLKPGQGCDTVFVNSTGRTL-DLATAYVTDESIY 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLS--WNQEHTFSNSSFIDE----- 118
L + ++R L+ + Y V +E + + Q H+ +D
Sbjct: 105 LLVSPNRRQFLLQWMDRYIFPMDKVELEDSSGKYAIFTLIGPQSHSVLAKLNLDPLIGQP 164
Query: 119 --------------RFSIADVLLHRTWGHNEKIASDIKTYHEL----------------R 148
R ++ L + + + + +L R
Sbjct: 165 LNTHIQQKIDNSLVRVALGSGLALPGYTLMVPMQEALTVWEQLVNTGVTLLGNRVWEQLR 224
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G P+ + ++ + IS KGCYIGQE ++R+ +++R +
Sbjct: 225 ILQGRPVPDYELT-EDYNALESGL--WKAISFEKGCYIGQETIARLNTYKGVKQRLWGVK 281
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ + P + ++ +D ++G L G LA + ++ + +
Sbjct: 282 LSQCVQP-HTEVILEDKKVGILTSCTETQEGAFGLAYVKTKAGGEGLRVTLGEQTGEL-- 338
Query: 265 KASFP 269
S P
Sbjct: 339 -VSVP 342
>gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1]
gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1]
Length = 5299
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L ++ ++V G+ FLQ +++ D+ + A +A+LTPQGK L + ++ D
Sbjct: 7 VRLEQRAVLEVGGEDRRAFLQGLVSNDMNKVAGDRAVYTALLTPQGKFLYDLFVVELG-D 65
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN 89
F+++ + ++ + L KL YKLRS
Sbjct: 66 VFLIDAEAARIEELRKKLSMYKLRSK 91
>gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
Length = 364
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 102/300 (34%), Gaps = 46/300 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
L+ + + L+D L S+V + V+ + + + ++
Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158
Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASD--------------IKTYHELRINHGI 153
+ R + G E A+D + Y R+
Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVRPGGVWAYEAHRVAARR 218
Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262
G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V
Sbjct: 278 GSVDRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337
>gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M]
gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 363
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 98/304 (32%), Gaps = 47/304 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + GK +L I T V LP + + L QG++ I T
Sbjct: 39 SHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVE-DHWIQTELGATTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
L+ + + + L++ L + V + + + L Q
Sbjct: 98 LDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLM 157
Query: 107 EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
F + R AD + I TY R+
Sbjct: 158 AVPLPGGGFARRMPSSAGQIELDLLVPRGDTAD--WKHRLTQAGVRPAGIWTYEAHRVAA 215
Query: 152 GIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
D PH+ + + L KGCY GQE V+R+ + + +++
Sbjct: 216 KRPRLGVD-TDERTIPHEVGWIGGPGIGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLH 274
Query: 209 --GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ D P +G +L +G +G VV L + V + AL +A
Sbjct: 275 LDGSTDRPSTGDSVLAGGRSVGRVGTVVDHVDLGPVALALVKRGLPADTALMTG---AEA 331
Query: 267 SFPH 270
+ P
Sbjct: 332 TIPA 335
>gi|27904872|ref|NP_777998.1| hypothetical protein bbp391 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|38372575|sp|Q89AC3|YGFZ_BUCBP RecName: Full=tRNA-modifying protein ygfZ
gi|27904270|gb|AAO27103.1| conserved hypothetical protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 318
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 32/249 (12%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ +L + SFI V GK +LQ IT ++ L + T GK+L +
Sbjct: 16 IKLTFLKDWSFITVTGKDCFNYLQGQITYNLKLLKSNKHIICSHCTIDGKVLSILRLFMH 75
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGVVLSWNQEHTFSNSS 114
+ + + +S I++L Y + S+V I + I G F N
Sbjct: 76 NDGYAYI-LRKSTSKFQINELKKYSIFSHVNICQKKDIILLGIMGREARTKLLQIFKNIP 134
Query: 115 F-IDERFSIADVLLHRTWGHNEKIASDI--------------------KTYHELRINHGI 153
D + DV++ + +E+ I K + L I
Sbjct: 135 HERDSVYQENDVIILKYDQPHERYLIIIKKHNLILNKILSLVDKIYHHKIWLALEIASNF 194
Query: 154 VDPNTDF-LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211
D+ + FP ++ LNG+ L KGCY GQE++++I + + + ++G
Sbjct: 195 P--IIDYNINKKFFPQSLNLEKLNGLDLKKGCYYGQEMIAKIHFKKLNKHYLHWLSGYSY 252
Query: 212 DLPPSGSPI 220
+P G I
Sbjct: 253 PIPKIGDNI 261
>gi|332141910|ref|YP_004427648.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551932|gb|AEA98650.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
macleodii str. 'Deep ecotype']
Length = 347
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 97/280 (34%), Gaps = 51/280 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS+ I + G+ A +L IT ++ L K AR A +GK +++
Sbjct: 16 VDLSDTMVISLEGEQADSYLHGQITVNINKLDDKSARHFAHCDNKGKTWSTGYVTR-HLS 74
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII------------------------------E 93
+L + + + +L Y + S V I +
Sbjct: 75 KLLLVANNDAGNHSLAQLNKYGVFSKVDILDDTPNYSAYFLSLTAAKNSGVTSTLSKMFD 134
Query: 94 IQPINGVVLSWNQEH-----TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT----- 143
+ + ++ + + ++ S S + + + + +++ ++ T
Sbjct: 135 VTDLEALLDTQHGDNHALQKIESESGLLFTANTAQEGFVLLLNKGAQQLVEEVNTQSIPC 194
Query: 144 -----YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
++ ++I + + P + LNGI KGCY+GQEVV+R +
Sbjct: 195 YPAVVFNAIQIKSVHAMLQKEAV-GEYIPQMINVQALNGIDFDKGCYMGQEVVARTRFLG 253
Query: 199 IIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKK 237
++ + G + + ++G V GK
Sbjct: 254 KNKRAAFSFKLEGKVDVTPGDAL---EKQLGENWRVAGKI 290
>gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 364
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 102/300 (34%), Gaps = 46/300 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 40 SHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVE-DHWIQTELAGTTY 98
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
L+ + + L+D L S+V + V+ + + + ++
Sbjct: 99 LDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDALGVDALPAEAA 158
Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASD--------------IKTYHELRINHGI 153
+ R + G E A+D + Y R+
Sbjct: 159 AVPTRGGFLRRMPAGPAGRLELDLVVPRAEAADWRNRLAQAGVRPGGVWAYEAHRVASRR 218
Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 219 PRLGMD-TDERTIPHEVGWIGGPGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGV 262
G+ D P +G P+ +G LG VV G ALA+ R D A+ G V V
Sbjct: 278 GSADRPATGDPVQAGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAV 337
>gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_29246 [Mycobacterium kansasii ATCC
12478]
Length = 363
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/295 (18%), Positives = 96/295 (32%), Gaps = 46/295 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I + GK +L +I T V LP + + L QG++ I DT
Sbjct: 39 SHRAVITLTGKDRQTWLHSISTQHVSDLPEGASTENLSLDGQGRVE-DHWIQTELADTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
L+ + + + L+ L + V E + V+ + S +
Sbjct: 98 LDTEPWRGEPLLSYLRKMVFWAAVTPEAADLAVLSLLGPRLADRAVLDVVGLDALPSEMA 157
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDI------------------------KTYHELRIN 150
+ + R +I D+ TY R+
Sbjct: 158 AVP---LAGGGFVRRMPAPAGQIELDLLVPREDCADWQHRLTQAGVRPAGVWTYEAHRVA 214
Query: 151 HGIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
D PH+ L + L KGCY GQE V+R+ + + +++
Sbjct: 215 ARRPRLGVD-TDERTIPHEVGWIGGPGLGAVHLDKGCYRGQETVARVHNLGKPPRMLVLL 273
Query: 208 T--GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
G+ D P +G ++ +G +G VV L + V + L
Sbjct: 274 HLDGSGDRPSTGDAVMAGGRAVGRVGTVVEHVDLGPVALALVKRGLPADTELMTG 328
>gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare ATCC 13950]
Length = 364
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 90/292 (30%), Gaps = 40/292 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 40 SHRGVLTLTGNDRQTWLHSISTQHVSNLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 98
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
L+ + + L++ L S V ++ P
Sbjct: 99 LDTEPWRAAPLLEYLRKMVFWSEVTPSDADLAVLSLLGPRLADQTILDALGVDALPAELS 158
Query: 101 VLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINHGI 153
+ + T + S +D D R + + Y R+
Sbjct: 159 AVPLDGGFVRRMPGTPAGSVELDLVVPRGDAGDWRNRLSQAGVRPGGVWAYEAHRVAAVR 218
Query: 154 VDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 219 PRLGVD-TDERTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLD 277
Query: 211 DDL--PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ P +G P+L +G LG VV L + + + L
Sbjct: 278 GSVERPSTGDPVLAGGRAVGRLGTVVDHVDLGPIALALLKRGLPAETELATG 329
>gi|282860448|ref|ZP_06269514.1| folate-binding protein YgfZ [Streptomyces sp. ACTE]
gi|282564184|gb|EFB69720.1| folate-binding protein YgfZ [Streptomyces sp. ACTE]
Length = 321
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 98/284 (34%), Gaps = 23/284 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
V LS++ + V G + +L ++T V L A + IL+ G I + +
Sbjct: 41 LVDLSHRGVVTVTGDDRLTWLHLLLTQHVSDLAPHQATEALILSANGHIEHALYLV-DDG 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERF 120
T ++ LI L K V + + + V+ + + E
Sbjct: 100 TTVWAHVEPGTEGELIAYLESMKFFYRVEVADRTGDVAVVHLPAGSIAEVPDGVAVREMP 159
Query: 121 SIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D+ L R + A I Y LR+ + PH+ +
Sbjct: 160 HGRDLFLPRADLEAYAAAHGPAVGILAYEALRVETHRPRLGFE-TDHRTIPHELGW-IGT 217
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228
+ L KGCY GQE V+R+ + +R + + LP G+P+ + ++G
Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGAEGRQLG 277
Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 278 FVTTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321
>gi|186686528|ref|YP_001869724.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc
punctiforme PCC 73102]
gi|186468980|gb|ACC84781.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc
punctiforme PCC 73102]
Length = 331
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/300 (18%), Positives = 94/300 (31%), Gaps = 54/300 (18%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
IKV G + FL T + L + +T + + + + ED IL
Sbjct: 29 WGRIKVAGDDRLNFLHNQSTNNFQILKPGQGCDTVFVTSTARTI-DLATAYVREDAVILL 87
Query: 69 IDRSKRDSLIDKLLFYKL-RSNVIIE---------------------------------- 93
+ ++R L++ L Y V +
Sbjct: 88 VSPNRRQYLMEWLDKYIFYADKVELSDITEYTNTFSLIGPGSDAVLEKLGIGELIGQPYG 147
Query: 94 ------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKTYHE 146
I P GV ++ +F F D + + + +
Sbjct: 148 NHQVYTIAPAEGVRIAVGSGLAAPGYTFT---FPYTDKSSVWNKLLEAGAVEMSDRAWDA 204
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + P + + IS TKGCYIGQE ++R+ +++ +
Sbjct: 205 LRILQGRPAPDAELT-DDYNPLEVGLWQT--ISFTKGCYIGQETIARLNTYKGVKQHLLG 261
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGV 262
I + + GS I D ++G L G L R +K + T V
Sbjct: 262 IRLSAPV-EVGSAIAVGDEKVGKLTSYTETADGYFGLGYIRTKAGGVGLKVKVGETEGEV 320
>gi|282896179|ref|ZP_06304202.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis
brookii D9]
gi|281198868|gb|EFA73746.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis
brookii D9]
Length = 327
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 47/296 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G+ + FL T + +L + ++T + + + + ED +
Sbjct: 27 SHWGRIEVTGEDRLRFLHNQSTNNFQSLQPGSGCDTVMVTSTARTI-DLVTGYVLEDRVL 85
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVII-EIQP---------------------------- 96
L + ++R+ L+ L Y V + +I
Sbjct: 86 LLVSPNRREFLLSWLDRYIFFTDQVTLTDITDQTATFTLLGPESDTLISKLGAASLLSQP 145
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
ING++ + + I R + + + + + LRI+
Sbjct: 146 DGHHISINGIIFAVGTGLAIPGYTLILPRAEK--QQIWQQLLDWGAVKLSDRHWEMLRIS 203
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G P+ + P + + +S KGCYIGQE ++R+ +++ I
Sbjct: 204 QGRPAPDAELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQHLWGIKLK 260
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262
G+ I + ++G L + G L R + + T +
Sbjct: 261 -SCAQPGTIITILEEKVGKLTSYIETPEGHFGLGYIRAKAGGVGLTVEVGETQGEI 315
>gi|12323347|gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana]
Length = 436
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 62/317 (19%), Positives = 101/317 (31%), Gaps = 70/317 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIE 61
V LS+ I+V G FL TA+ +L + +TP + + + I K
Sbjct: 107 VDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMK-- 164
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFS--------- 111
+ +L + + S+I+ L Y + V I+ + + +
Sbjct: 165 -NAILLTVSPTTCQSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQLHYSYATVK 223
Query: 112 ------------------------------------NSSFIDERF-----SIADVLLHRT 130
S DE F V + +T
Sbjct: 224 NMKQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWKT 283
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
I + +LRI G P + +A + N ISL KGCY GQE
Sbjct: 284 LLAEGAIPMGSVAWEKLRITQGRPAPEREL-SKEFNVLEAGL--WNSISLNKGCYKGQET 340
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI 244
++R+ + I++R + + GS I D ++G L G K L +
Sbjct: 341 IARLMTYDGIKQRLCGLNLSAP-SEPGSTITVDGKKVGKLTSYTGGKNGSGHFGLGYIK- 398
Query: 245 DKVDHAIKKGMALTVHG 261
A G +TV
Sbjct: 399 ---KQAASIGNTVTVGE 412
>gi|239942377|ref|ZP_04694314.1| hypothetical protein SrosN15_15372 [Streptomyces roseosporus NRRL
15998]
gi|239988842|ref|ZP_04709506.1| hypothetical protein SrosN1_16142 [Streptomyces roseosporus NRRL
11379]
gi|291445832|ref|ZP_06585222.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291348779|gb|EFE75683.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 321
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 103/284 (36%), Gaps = 25/284 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI-LLYFLISKIEE 62
V LS++ + V G + +L ++T V L A + IL+ G I +L+ +
Sbjct: 42 VDLSHRGVVTVTGDDRLSWLHLLLTQHVSDLAPHQATEALILSANGHIEHATYLV--DDG 99
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERF 120
T + ++ + LI L K V + + + V+ + + E
Sbjct: 100 TTVWMHVEPDTQADLIAYLESMKFFYRVEVADRTPDTAVVHLPAGSIAEAPDGVAVRETP 159
Query: 121 SIADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
D+ L R + A+ I Y LR+ + PH+ +
Sbjct: 160 QGRDLFLPRDGLEAFAAAHGPAAGILAYEALRVEGHRPRVGFE-TDHRTIPHELGW-IGT 217
Query: 177 GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIG 228
+ L KGCY GQE V+R+ + +R + + LP G+P+ + ++G
Sbjct: 218 AVHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPGHGTPVRLAADGQEGRQLG 277
Query: 229 TLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ G ALA+ R VD + G V+
Sbjct: 278 FITTSARHHELGPIALALVKRNVAVDAELIAGDTAAAQETVVEP 321
>gi|167836302|ref|ZP_02463185.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis MSMB43]
Length = 169
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A FL + +T D+ L AR + +P+G++L FL + D
Sbjct: 41 LEQFGIVDVTGPDAATFLHSQLTNDIEHLDAASARLAGYCSPKGRLLASFLAWRAGHDVR 100
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+L + + + ++ +L + LR+ + V + + + + S D
Sbjct: 101 LL-VSKDVQPAVQKRLSMFVLRAKAKLADASGTLVAVGFAGDVRAALSGIFD 151
>gi|75907873|ref|YP_322169.1| glycine cleavage T protein [Anabaena variabilis ATCC 29413]
gi|75701598|gb|ABA21274.1| Glycine cleavage T protein (aminomethyl transferase) [Anabaena
variabilis ATCC 29413]
Length = 327
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 90/276 (32%), Gaps = 44/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V + FL T D +L + ++T + + + S + +D I
Sbjct: 27 STWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCDTVMVTSTARTI-DLVSSYVLDDAVI 85
Query: 67 LEIDRSKRDSLIDKLLFYKLR----------------------SNVIIEIQPINGVVLSW 104
L + S+R+ L+ L Y S+ ++E G++
Sbjct: 86 LLVSPSRREFLLQWLDRYIFFADKVQLTDITEETATFSIIGPGSDAVVEKLGAGGIIGQP 145
Query: 105 NQEHTFSNSSFI---DERFSIADVLL----------HRTWGHNEKIASDIKTYHELRINH 151
H + I + L + + + + + LRI
Sbjct: 146 QGNHITIDGGAIVAVGSGLASPGYTLILPVSQKQQVWQQIIDSGAVELSDRAWDTLRILQ 205
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G P+++ P + + IS KGCYIGQE ++R+ +++ I
Sbjct: 206 GRPAPDSELT-DDYNPLEVGLWQT--ISFNKGCYIGQETIARLNTYKGVKQYLWGIRLNA 262
Query: 212 DLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243
G I D ++G L G L R
Sbjct: 263 PT-EIGDTITIGDEKVGKLTSYTETPDGYFGLGYIR 297
>gi|158334606|ref|YP_001515778.1| glycine cleavage T protein [Acaryochloris marina MBIC11017]
gi|158304847|gb|ABW26464.1| glycine cleavage T protein, putative [Acaryochloris marina
MBIC11017]
Length = 354
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 107/312 (34%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ ++ + + FL T TL S +T + + + + + E+ +
Sbjct: 46 THWGRLQFTDQDRLSFLHNQTTNTFKTLKPGEGCESVFVTSTARTI-DLVSAYVTEEAVL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIE-------------------------------- 93
L + ++R L+ Y V IE
Sbjct: 105 LLVSPTRRAQLMSWCDRYIFFGDKVKIEDITTQTITFSLLGPESSRLLHKLGISDLPESP 164
Query: 94 -------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
I+ V S + T + F D + L + + K + +
Sbjct: 165 HHHITTQIKGHTVRVASGSGLTTPGYTLFAD---AEVGADLWQALTEQDACPLGEKVWEQ 221
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR++ G P+ + P +A + IS KGCYIGQE ++R+ +++R
Sbjct: 222 LRVSEGRPKPDAELT-EDFNPLEAGLWQT--ISFDKGCYIGQETIARLNTYQGVKQRLWG 278
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262
I + +PI +D ++G L +V G L + D + + TV G
Sbjct: 279 IQL-GESVSVDTPITLEDKKVGVLTSLVETAEGPVGLGYVKTKAGDAGAQVSVG-TVTGT 336
Query: 263 RVKA---SFPHW 271
V+ ++P W
Sbjct: 337 LVEVPFLTYPQW 348
>gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99]
gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 363
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 99/304 (32%), Gaps = 47/304 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + GK +L I T V LP + + L QG++ I T
Sbjct: 39 SHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVE-DHWIQTELGATTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
L+ + + + L++ L + V + + + L Q
Sbjct: 98 LDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLM 157
Query: 107 EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
F + R AD + I TY R+
Sbjct: 158 AVPLPGGGFARRMPSSAGQIELDLLVPRDGTAD--WKHRLTQAGVRPAGIWTYEAHRVAA 215
Query: 152 GIVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
D PH+ + + L KGCY GQE V+R+Q+ + +++
Sbjct: 216 KRPRLGVD-TDERTIPHEVGWIGGPGIGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLH 274
Query: 209 --GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ D P +G +L + +G +G VV L + + AL +A
Sbjct: 275 LDGSTDRPSTGDSVLAGERSVGRVGTVVDHVDLGPVALALAKRGLPADTALMTG---AEA 331
Query: 267 SFPH 270
+ P
Sbjct: 332 TIPA 335
>gi|154338439|ref|XP_001565444.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062493|emb|CAM42355.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 397
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 70/204 (34%), Gaps = 25/204 (12%)
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR--TWGHNEKIASDIKTYHELRIN 150
T S D + + L R S + Y L +
Sbjct: 182 SDSEDAAATFVTGPPPTSSLPPATDSVATPLNWFLRRCVVPATWAPPLSSVDPYTTLLYS 241
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG- 209
GI + F + P + +D L G+S KGCY+GQE+ R + RKR + +
Sbjct: 242 RGIGEGPGVF-KNKSLPFEGNLDFLKGVSFHKGCYLGQELTHRTHVMLVTRKRTVPLHFG 300
Query: 210 -TDDLPPS------------------GSPILTDDIE-IGTLGVVVGKKALAIARIDKVDH 249
T PP+ G P+ + E IG + V G+ + + R+ VD
Sbjct: 301 PTSGGPPAVSTTTDDGAVATTRPVEIGEPLYSAAKEKIGVVTGVCGQVGVGLLRLRYVDK 360
Query: 250 AIKKGMALTV-HGVRVKASFPHWY 272
A L + G + P W+
Sbjct: 361 ATHTVPGLQLKDGTPAQTHLPDWW 384
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-- 61
L ++ ++V G A FLQ I T D+ L + L G++L + + +
Sbjct: 9 CRLPSRRILRVRGTDAHEFLQGIFTNDLHELHPNGSMYGCFLYFTGRVLCDAHLYQCKQL 68
Query: 62 ---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ + ++++ S L+D L K+R V I+ VVL+ +E + + + D
Sbjct: 69 HERQASILVDVHESSVAELLDHLTEMKMRKKVHIDDVGKELVVLAALEETSAAPPTGAD 127
>gi|319943553|ref|ZP_08017835.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599]
gi|319743368|gb|EFV95773.1| folate-binding protein YgfZ [Lautropia mirabilis ATCC 51599]
Length = 434
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ L N ++ G A FL + D+LTL AR + LTP G++L F + +
Sbjct: 16 LPYALLQNLGVLRAQGPDAPSFLHGQFSNDILTLMPGHARLAGYLTPNGRLLATFWVIRH 75
Query: 61 E---------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+ TF L R ++ +L Y LR+ I + VL + +
Sbjct: 76 DMPPAPEQPAVPTFWLVCSRDLAAAMAKRLSMYVLRAKCKIVDASNDHAVLGFVGPARRA 135
Query: 112 NSSFIDERFSIADVLLH 128
+ + L
Sbjct: 136 TQALAGHEDVVVTAALP 152
Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 19/131 (14%)
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ +++S RF +++ + +L + GI T
Sbjct: 244 DDNSAAADASQPAPRFRMSE-----------------SDWLQLDVASGIP-WICAASSET 285
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-D 223
P ++L+ G++ KGCY GQEVV+R ++R +++R + LP G+ +L D
Sbjct: 286 FVPQMVNLELVGGVNFKKGCYPGQEVVARSEYRGKVKRRMFAGMCSGPLPEPGTDVLAWD 345
Query: 224 DIEIGTLGVVV 234
IG + V
Sbjct: 346 GTPIGQVIHVA 356
>gi|209525728|ref|ZP_03274265.1| folate-binding protein YgfZ [Arthrospira maxima CS-328]
gi|209493897|gb|EDZ94215.1| folate-binding protein YgfZ [Arthrospira maxima CS-328]
Length = 349
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 100/298 (33%), Gaps = 47/298 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ + FL T + + +T + + + + E+ +
Sbjct: 46 SHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGCDTVFVTSTARNI-DLATAYMTEEAVL 104
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFS-------------- 111
L + ++R L+ L Y V I+ V S + S
Sbjct: 105 LLVSPNRRQHLLQWLDRYIFPMDRVNIKDISDQWAVFSLIGPESSSLLTKLGATMAENLT 164
Query: 112 -NSSFID------ERFSIADVL----------------LHRTWGHNEKIASDIKTYHELR 148
+ ++D R +I L L + + + + +LR
Sbjct: 165 RGNHWVDMVANISVRVAIGSGLAREGYTLIVPTEAAGNLWLSLTEAGAVPLGDRIWEQLR 224
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G P+ + P +A + IS KGCYIGQE ++R+ +++R +
Sbjct: 225 ILQGRPTPDRELT-EDYNPLEAGL--WGNISFEKGCYIGQETIARLNTYKGVKQRLWGLR 281
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262
+ G+ I D ++G L + G L R ++ + T V
Sbjct: 282 LSG-FVEPGTVINLKDEKVGKLTSITETQEGWFGLGYIRTKAGGEGLEVSLGDTTATV 338
>gi|168059980|ref|XP_001781977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666550|gb|EDQ53201.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 357
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 62/310 (20%), Positives = 107/310 (34%), Gaps = 54/310 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIE 61
V +S I+V G+ I FL TAD L + +T G+ L + K
Sbjct: 47 VEMSQIGRIRVTGEDRIRFLHNQTTADFQKLKDGEGCDTVFVTSTGRTIDLAKAWVMK-- 104
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS-NVIIEI-------------------------- 94
++ IL + S+R SL L Y + V +E
Sbjct: 105 -NSVILFVSPSQRQSLCALLNKYIFFADKVEVEDITDKTYYFTLVGPNSSKVCFRSFTIK 163
Query: 95 QPINGVVLSWNQEHTFS----NSSFIDERFSIA-----DVLLHRTWGHNEKIASDIKTYH 145
G + + E T S +S ++ + + +
Sbjct: 164 DKPYGSFMHYAIEGTPVTVGVGSGLASPGYSFMLSTDTAGIVWEAILNAGAVPMGAAAWE 223
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+LR+ G P + S +A + + IS+TKGCYIGQE ++R+ + ++++
Sbjct: 224 QLRVWQGRPAPGRELT-SEYNALEAGL--WHTISMTKGCYIGQETIARLITYDGVKQQLY 280
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK--------ALAIARIDKVDHAIKKGMAL 257
+ + + I ++ +G L V K LA R + +
Sbjct: 281 TVH-MNGYAEPETEITCNEARVGKLTSCVEAKEGSEHSHVGLAYIRRKSGGENLVVDIG- 338
Query: 258 TVHGVRVKAS 267
V G V+AS
Sbjct: 339 GVSGRVVEAS 348
>gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247]
gi|262084295|gb|ACY20263.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247]
Length = 389
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 104/305 (34%), Gaps = 53/305 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I++ G + +L I + + LP + + + L G++ +F+++ ++ T
Sbjct: 51 SDRAVIEISGDERLTWLHTISSQHISNLPDRSSAENLSLDVNGRVEEHFVLTDVDGVT-W 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-------------------------IEIQPINGVV 101
++ + S+ +L L + +EI P +
Sbjct: 110 VDTEGSRGAALHGFLAKMVFWAKAEPVLRPDMKVVTLVGPAARSGQIAELLEIDPDAPIY 169
Query: 102 LSWNQEHT----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIK 142
+ + T N++ + + LL R W +
Sbjct: 170 AAGDLPETHHEDEPLGFWRVMPPIGENATLPVVDVVLPEYLLDRWWSALVDAGARMAGTW 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRN 198
+ LR+ D PH+ + L KGCY GQE V+R+ +
Sbjct: 230 AFDALRVAAVRPRLGAD-TDDRTIPHEVGWIGGPAEFGAVHLDKGCYRGQETVARVHNLG 288
Query: 199 IIRKRPMIITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
+R +++ P +G P++ +G LG VV L + + V +
Sbjct: 289 KSPRRLVLLHLDGSADGRPATGDPVVAGGRTVGRLGTVVDHFELGLVALALVKRNVPADT 348
Query: 256 ALTVH 260
L V
Sbjct: 349 DLVVG 353
>gi|119713593|gb|ABL97644.1| hypothetical protein MBMO_EB0-39H12.0020 [uncultured marine
bacterium EB0_39H12]
Length = 274
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 22/250 (8%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IE 61
+ L + S +++ G+ + LQ IT+DV A AI +G+++ F + K
Sbjct: 6 LINLEHLSILELNGEGSFQLLQGQITSDVNKATINNAEIGAICDIKGRVVSSFTVIKNTA 65
Query: 62 EDTFILEIDRSKR----DSLIDKLLFYKLRSNV-------------IIEIQPINGVVLSW 104
+ ++L D+S + L+ FY + V ++E P + S+
Sbjct: 66 SEGYLLIGDKSVLQKTEEILMKYQPFYDVEIKVNEDFKFYGIHEEYLVEYYPQTDLEKSY 125
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+F F+ +++ I L+ + + I+ + I + + ++ +
Sbjct: 126 QLYDSFWRIHFLKKKYHI---LITKEDLFEDNHEVQIEEWFIDDIQNKNFEISSKSI-GM 181
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD 224
PH+ L + + KGCY GQE+V+R+ +R ++ + + L +
Sbjct: 182 FTPHELGYHLSSRVDFEKGCYTGQEIVARMHYRAKKLPSLLVKSSSTFLEDYSKVFDANK 241
Query: 225 IEIGTLGVVV 234
IG + +
Sbjct: 242 TAIGIILSSI 251
>gi|56750597|ref|YP_171298.1| glycine cleavage T-protein [Synechococcus elongatus PCC 6301]
gi|81299763|ref|YP_399971.1| glycine cleavage T-protein-like [Synechococcus elongatus PCC 7942]
gi|56685556|dbj|BAD78778.1| similar to glycine cleavage T-protein [Synechococcus elongatus PCC
6301]
gi|81168644|gb|ABB56984.1| glycine cleavage T-protein-like [Synechococcus elongatus PCC 7942]
Length = 344
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 97/294 (32%), Gaps = 52/294 (17%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
S I+V + + FL T A + ++T +IL I+ I+ + L
Sbjct: 33 WSVIQVSDRDRLTFLHNQSTQSFWQRQPGEACETVLVTATARIL-DLAIAVIDVEAVWLL 91
Query: 69 IDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIADVL 126
+ S++ L+ +L Y S V + VL+ + T S + + +
Sbjct: 92 VSPSRQADLLQRLDRYIFFSDQVTVADADSTLAVLTLIGDSTRSLLQTVVADALPELTEN 151
Query: 127 LHRTWGHNEK------------------------------------IASDIKTYHELRIN 150
H + + ++ + LRI
Sbjct: 152 QHAALAIAGQSVQWVNYSGLGLPGSLLLVPVSGLDAVQAALQAAGAQLATVEQWERLRIQ 211
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P +A + +S KGCYIGQE ++R+ +++R + T
Sbjct: 212 QGRPAVDRELT-EEYNPLEAGLWQT--LSFDKGCYIGQETIARLNTYKGVKQRLYGLALT 268
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260
+P+L + ++G L + G L R G LTV
Sbjct: 269 TLPSQLPAPLLLEGEKVGVLTSAIATATGAIGLGYLRTKA------GGAGLTVD 316
>gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
smegmatis str. MC2 155]
gi|118175099|gb|ABK75995.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
smegmatis str. MC2 155]
Length = 359
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 63/304 (20%), Positives = 102/304 (33%), Gaps = 49/304 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + GK +L I + V P + L QG++ + + T
Sbjct: 39 SHRAVLALTGKDRQGWLHNISSQHVSAQPDGTVTENLSLDMQGRVE-DHWVQTELDGTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----------GVVLSWNQEHTFSNSSF 115
L+ + + + L L S+V IE + VLS +
Sbjct: 98 LDTESWRGEPLAAYLRKMVFWSDVQIEPADLGVLSLLGPALAGDAVLSALGLSALPEEAT 157
Query: 116 IDE--------RFS----IADVLLHR--------TWGHNEKIASDIKTYHELRINHGIVD 155
R DVL+ R + + Y R+
Sbjct: 158 AQPLPGGGFVRRVPSEGLELDVLVARETLDDWKQRLVSAGVRPAGMWAYEAHRVAAQRPR 217
Query: 156 PNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210
D PH+ + + L KGCY GQE V+R+ + + +++ G+
Sbjct: 218 LGVD-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGS 276
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG-VRV 264
D P +G P+L +G LG VV G ALA+ V + L G V V
Sbjct: 277 SDRPATGDPVLAGGRTVGRLGTVVDHVDDGPIALAL-----VKRGLPAETELMTGGSVEV 331
Query: 265 KASF 268
AS
Sbjct: 332 PASI 335
>gi|54022550|ref|YP_116792.1| hypothetical protein nfa5830 [Nocardia farcinica IFM 10152]
gi|54014058|dbj|BAD55428.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 371
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 100/302 (33%), Gaps = 41/302 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ +++ G + +L I + V L + + + L G+I +F++S ++ T
Sbjct: 52 SHRFVLRITGGERLSWLHTISSQHVANLGDRRSAENLDLDLNGRIQHHFVLSDLDG-TVW 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107
++ + + +L+D L ++ + V+ E
Sbjct: 111 IDTEADRGPALLDFLTKMVFWADAKPAEATDHAVLSLLGPEVARLHEALGVTELPEIYAV 170
Query: 108 HTFSNSSFIDE-RFSIAD-----------VLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ F+ + AD T + + + LR+
Sbjct: 171 TPLPDGGFLRRMPWPTADSYDLVVPRERLGAWWTTLTEAGAEPAGMWAFEALRVAALRPR 230
Query: 156 PNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D PH+ + L KGCY GQE V+R+ + ++ +++
Sbjct: 231 IGLD-TDERTIPHEVRWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRQLVLLHLDG 289
Query: 212 DL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P G+ + +G LG VV L + V A+ LT G A
Sbjct: 290 SADERPQPGADVTAGGRTVGRLGSVVDHYELGPIALALVKRAVPADAQLTT-GPSAAAID 348
Query: 269 PH 270
P
Sbjct: 349 PD 350
>gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 360
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 95/292 (32%), Gaps = 43/292 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L +I T V LP + + L QG++ + DT
Sbjct: 39 SHRAVLTLTGSDRQKWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWVQTELGDTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV---------------------IIEIQPINGVVLSWN 105
L+ + + + L++ L S+V ++E ++ +
Sbjct: 98 LDTEPWRGEPLLEYLRKMVFWSDVAPAAADMAVLSLLGPRLSDPAVLEALGVDALPAELT 157
Query: 106 QEHTFSNS---------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ R A + I Y R+
Sbjct: 158 AMPLAGGGFARRMPGLPAGQIELDLVVPRGESAG--WQERLVRAGLRPAGIWAYEAHRVA 215
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-- 208
D PH+ + + L KGCY GQE V+R+ + + +++
Sbjct: 216 ALRPRLGVD-TDERTIPHEVGW-IGGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLD 273
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
G+ D P +G P+L D +G LG VV L + V + L
Sbjct: 274 GSVDRPSTGDPVLADGRAVGRLGTVVDHVDLGPVALALVKRGVPADTELATG 325
>gi|87311326|ref|ZP_01093447.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM
3645]
gi|87285906|gb|EAQ77819.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM
3645]
Length = 318
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 40/277 (14%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L ++ +++ G + FL + TA++ LP + I T QG+IL +F +
Sbjct: 18 CFNLPRRTRLQMSGADRVKFLHNLSTAEIKKLPPGQGCETFIPTLQGRILGHFFALPT-D 76
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQEHTFSNSSF----- 115
++ +L ++ ++L+ Y + +V + + +L T+ ++
Sbjct: 77 NSILLTGVSNQAETLLPHFQKYAVIEDVEVVDRTADTSEYLLVGPHAATWIEQTWGIAPP 136
Query: 116 -------IDERFSI--ADVLLHRTWG--------------HNEKIASDIKTYHELRINHG 152
D+ +I + H WG + LRI G
Sbjct: 137 ETNLQIVADDDVTIYRTPYVGHSAWGVIASGENQAAPADALAALPQGTEEALSALRIEAG 196
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D +A D IS TKGCY+GQE ++RI + +R + +
Sbjct: 197 FPYFGRDITSEN-LAQEADRDAA-AISFTKGCYLGQETIARIDALGHVNRRLLGVKFAAK 254
Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243
P + D + + LA+ R
Sbjct: 255 -PSDEATFEIDGKSALNVTSIAFSQDQDQWIGLAMVR 290
>gi|255609522|ref|XP_002539057.1| Protein ygfZ, putative [Ricinus communis]
gi|223508958|gb|EEF23326.1| Protein ygfZ, putative [Ricinus communis]
Length = 233
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ +++ G+ FLQ +T D+ L + + T +G++L L+ K + D
Sbjct: 41 ADLSHLGLLELTGEDTQAFLQGQLTNDIKLLTGSNSEYAGYCTAKGRLLATMLLWK-QGD 99
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
T ++D +++ +L + LRS V I V + + + S + F
Sbjct: 100 THYAQLDGGIAPTIMKRLSMFVLRSKVKIADVSTVKVRIGLSGRQAETALSGL---FPAI 156
Query: 124 DVLLHRTWGHNEKI 137
H+ HNE
Sbjct: 157 PAQPHQLVVHNEAT 170
>gi|289548965|ref|YP_003473953.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484]
gi|289182582|gb|ADC89826.1| folate-binding protein YgfZ [Thermocrinis albus DSM 14484]
Length = 301
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 107/295 (36%), Gaps = 43/295 (14%)
Query: 9 QSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
+S IKV G + FL ++T DV +P +L G + F +
Sbjct: 8 RSKIKVYGQKNRLAFKGLDEEHTLFLHGLLTNDVKGMPPFSVSYHLMLRQNGAPIREFFL 67
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-------------QPINGVVLSW 104
K++ D ++L+ + +I+ L KL V +E + V W
Sbjct: 68 YKLQ-DHYLLDTPDPAKQ-VIEDLEKRKLSLKVYLEDLTPNYRHIFLLGEDSKDFVEKVW 125
Query: 105 NQEH-----TFSNSSFIDE---RFSIADVLLHRTWGHNEKIAS---DIKTYHELRINHGI 153
S I RF L E S + LRI I
Sbjct: 126 GNAPQEGRLIVEGSVIIAHNSVRFRETGYDLIGELSDLELPESLMMTTEEAENLRIRRCI 185
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P +A + L ISL KGCY+GQE ++R+ +R + +++
Sbjct: 186 PAVGKELREG-FSPLEAGV-LRYAISLNKGCYVGQEAIARVYYRGRTPRTLVLLQAEG-- 241
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + D ++GT+ V G + A+ + +V HA K+ + T G VK
Sbjct: 242 LREGEKLFDGDKQVGTVTSV-GSEGYALGYVLRV-HAQKEKVLYTPEGTAVKLIK 294
>gi|296395429|ref|YP_003660313.1| folate-binding protein YgfZ [Segniliparus rotundus DSM 44985]
gi|296182576|gb|ADG99482.1| folate-binding protein YgfZ [Segniliparus rotundus DSM 44985]
Length = 338
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 99/280 (35%), Gaps = 35/280 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN I++ G + +L I+T V LP + +L G++ + + + E+ ++
Sbjct: 42 SNLDVIRLTGPERLAWLNKIVTQKVDELPAPSWVQALVLDAHGRVEHHMEVHETGEEAWL 101
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE---HTFSNSSFIDERFSIA 123
+ + ++L+ L ++V E P + V+ + H + R+S
Sbjct: 102 V-TEPGHGEALLAYLAKMVFWADVAPEPAPQHKVLAVYEGAARRHLVLSPEQFAPRWSQL 160
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL--------MDLL 175
R G LR+ D PH+ +
Sbjct: 161 VQGGARPVG--------TWAVEALRVAALEPRLGAD-TDERTVPHEVGWVNPRGSALPEW 211
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLG 231
+ L KGCY GQE VS+I + ++ +++ DL P + + +G LG
Sbjct: 212 KAVHLGKGCYRGQETVSKIANVGRPPRQLVLLHLDGETWGDLRPGETVLDEGGSSVGRLG 271
Query: 232 VVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
V G ALA+ V + L V G +
Sbjct: 272 TAVAHYEFGDIALAL-----VKRGLSPEAPLIVAGRPAQL 306
>gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
JLS]
gi|126237284|gb|ABO00685.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
JLS]
Length = 356
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/296 (18%), Positives = 101/296 (34%), Gaps = 52/296 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-EDTF 65
S+++ + + G +L I + + P + L QG++ + E +
Sbjct: 38 SHRATLALSGAERRSWLHTISSQHISDQPDGTVTQNLSLDGQGRVE-DHW-WQTELDGVL 95
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------------GVVLSWN 105
L+ + + + L++ L ++V IE + G + + +
Sbjct: 96 YLDTEPWRGEPLLNYLRRMVFWADVTIEPADLAVLSLLGPALADTPVLDALGLGSLPAES 155
Query: 106 QEHTFSNSSFID-------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
FI R +AD T + + Y R+
Sbjct: 156 TAVALPGGGFIRRLPADGLELDLLVPRAQVADWRDRLTAAGVRP--AGVWAYEAHRVAAL 213
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210
D PH+ + + + L KGCY GQE V+R+ + + + + GT
Sbjct: 214 QPRLGVD-TDERTIPHEVGW-IGSAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGT 271
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG 261
D P +G P+L +G +G VV G ALA+ V + LT G
Sbjct: 272 TDRPSTGDPVLAGGRTVGRVGTVVEHIDDGPVALAL-----VKRGLPADTPLTTGG 322
>gi|295837501|ref|ZP_06824434.1| glycine cleavage T protein [Streptomyces sp. SPB74]
gi|295826551|gb|EDY44879.2| glycine cleavage T protein [Streptomyces sp. SPB74]
Length = 326
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 22/259 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + +L+ G + + + +
Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T L ++ R++L L K V + + V+ + + E
Sbjct: 106 TTWLHVEPGTREALAAYLESMKFFYRVEVVDRTEEYAVVRLPAGSITPSPEGAAVRETPE 165
Query: 122 IADVLLHRTWGHNEKIASDIK----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L R A+ LR+ + + PH+ L
Sbjct: 166 GRDVFLPRAELAAFAGAAGPAIGLLALEALRVEAHLPRLGFE-TDHRTIPHEVGW-LARA 223
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LPP G+P+ + +G
Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGAESRVLGF 283
Query: 230 LGVVV-----GKKALAIAR 243
+ G AL + +
Sbjct: 284 VTTSARHHELGPIALGLIK 302
>gi|117927273|ref|YP_871824.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus
cellulolyticus 11B]
gi|117647736|gb|ABK51838.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus
cellulolyticus 11B]
Length = 352
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 30/288 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ +++ G + +L + T ++ LP + + +L+P G + + ++ +
Sbjct: 45 VDLSHRGVVQISGPDRLRWLNDLTTQRLIDLPAQTGTETLVLSPNGHVEHHLMLV-DDGT 103
Query: 64 TFILEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
T + ++ L+D L + LR +E + + Q + F
Sbjct: 104 TTWVHVEPGTAGGLVDFLSSMRFLLR----VEARDVTDDWAVVWQPVDQPHPEFPTRVDP 159
Query: 122 IADVLLHRTW----GHNEKIASD------IKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
AD L R + +D I ++ LRI G D PH+
Sbjct: 160 RADALHGRELFIPRKQFPAVIADFGRPAGIAAWNALRIEAGRPRFGVD-TDHRSIPHELG 218
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD----LPPSGSPILTDDIEI 227
+ L KGCY GQE V+ + + +R + + LP G+ +L
Sbjct: 219 WIGF-AVHLNKGCYRGQETVAHVANLGRPPRRLVRLHLDGSVREQLPAKGAQVLVAGTVA 277
Query: 228 GTLGVVV-----GKKALAIAR--IDKVDHAIKKGMALTVHGVRVKASF 268
G L G ALA+ R +D AI + T ++
Sbjct: 278 GHLTSAAYHHELGPIALALVRYAVDDSAAAIVRDADGTDRAATIEPIV 325
>gi|324519008|gb|ADY47260.1| Transferase caf-17 [Ascaris suum]
Length = 186
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
V IE +N + + + +D R L + +A D Y E R+
Sbjct: 5 VAIEKCGMNVFFV-----ESTCEGAVVDPRVPAFGSRLLSDSLPDSTLA-DASLYEERRL 58
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GIV+ + P DL++G+S KGCY+GQE+ +R R I+KR + T
Sbjct: 59 EFGIVEGGIE--TRGALPVYRNADLMHGMSDNKGCYLGQEMTART-LRAAIKKRVLPFTC 115
Query: 210 TDDLPPSGSPILTDD-IEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + D +G + V G + LA+ R+D+ D L V ++
Sbjct: 116 DG--AAKGRVMDPDGYTNMGEVLVCNGHRGLALLRLDQGD----VSRCLKAGDVDIRPFV 169
Query: 269 PHWY 272
P W+
Sbjct: 170 PSWW 173
>gi|170077702|ref|YP_001734340.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus
sp. PCC 7002]
gi|169885371|gb|ACA99084.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus
sp. PCC 7002]
Length = 352
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 98/301 (32%), Gaps = 51/301 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGK--------ILLYFLIS 58
S+ + G +L T + L + + ++ + IL L
Sbjct: 49 SHWGLLNFTGADRQRYLHNQSTNQIQQLQSGQSCDTVLVNSTARTIDLATVHILDDALWV 108
Query: 59 KIEED--TFILE-----------IDRSKRDSLIDKLLFYKLRSN--------VIIEIQPI 97
++ TF+LE ++ S + L +++ V + P
Sbjct: 109 QVSPQKKTFLLEWFDRFLFPMDKVEISDLSGQFNILSLMGVQAKEILEKLTGVTLADFPA 168
Query: 98 NG----------VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
G ++ + + + A V + + + I + +L
Sbjct: 169 GGHQFLEIQGQNILCATGNSLKLPGYTLYIP--AEAGVEIWQALMNLGMIPCGEAAWEKL 226
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI+ G P+ + P +A + + IS KGCYIGQE ++R+ +++R I
Sbjct: 227 RIHQGRPAPDQELT-EDYNPLEAGL--WDCISFDKGCYIGQETIARLNTYKGVKQRLFGI 283
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + I + G + + AL R ++ +TV V K
Sbjct: 284 QLSAPVAVP-CKIFVGEERAGVITSIDPDNTFALGYVRTKVGGEELE----VTVGEVTGK 338
Query: 266 A 266
Sbjct: 339 V 339
>gi|111021816|ref|YP_704788.1| hypothetical protein RHA1_ro04845 [Rhodococcus jostii RHA1]
gi|110821346|gb|ABG96630.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 373
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 44/300 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G + +L I + V LP + + L G++ +F+ + ++ T
Sbjct: 54 SHRFVIAISGPERLTWLHTISSQHVAALPDGASAENLSLDVNGRVEHHFVQTDLDGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-----------------IEIQPINGVVLSWNQEHT 109
++ + + L+ L S + + GVV
Sbjct: 113 IDTEADRGPDLLSFLTKMVFWSKAEPREGNELAVLSVIGPDAVTVLDAAGVVAPAEPYAA 172
Query: 110 FS----------------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ + + R +A + + LR+
Sbjct: 173 VAVPGGGFVRRMPWPAAESFDLVIPREGLATWWGR--LTAAGAAPAGTWAFEALRVAAAR 230
Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 231 PRIGLD-TDDRTIPHEVRWIGGPADHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHL 289
Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
P G P+ +G +G V+ L + V +I L V
Sbjct: 290 DGSAEGRPEPGDPVTAGGRAVGRIGTVIDHHELGPIALALVKRSIPTDTELVVGSCAASI 349
>gi|148657807|ref|YP_001278012.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
sp. RS-1]
gi|148569917|gb|ABQ92062.1| aminomethyltransferase [Roseiflexus sp. RS-1]
Length = 324
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 92/296 (31%), Gaps = 51/296 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ L + T D+ L + + TP G+I+ L D ++
Sbjct: 28 IFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRII-DLLTVHALNDALLIVTSP 86
Query: 72 SKRDSLIDKLLFYKLR-SNVIIE-------------------IQPINGVVLSWNQEHTFS 111
+ + L V ++ I + G + +
Sbjct: 87 DQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELTGAAIDLPLHGITT 146
Query: 112 N-----SSFIDERFSIADV------------LLHRTWGHNEKIASDIKTYHELRINHGIV 154
S I R I + D T LRI G
Sbjct: 147 TAIAGVSLLIARRKPIGGDSFTLYVPSDGYDAVQAALLAAGATPIDGDTLDVLRIERGYG 206
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ P + + L+ +S +KGCY+GQE+++R++ R + KR + + +
Sbjct: 207 AFGREL-SQEYIPLETGL--LDAVSFSKGCYVGQEIIARMESRGRLAKRLCGLQLSQPVA 263
Query: 215 PSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ ++ D + G L G ALA R + G + V G V
Sbjct: 264 SP-AKLVCDGRDAGDLTSAAVSPRFGPIALAYVRTVYAE----PGTVVGVEGTGVT 314
>gi|288818695|ref|YP_003433043.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6]
gi|288788095|dbj|BAI69842.1| glycine cleavage T protein [Hydrogenobacter thermophilus TK-6]
gi|308752283|gb|ADO45766.1| folate-binding protein YgfZ [Hydrogenobacter thermophilus TK-6]
Length = 300
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/304 (19%), Positives = 110/304 (36%), Gaps = 50/304 (16%)
Query: 1 MSSVYLSNQSFIKVCG-----------KSAIPFLQAIITADVLTLPYKIARGSAILTPQG 49
M + LS + IKV G + FL +++ D+ + + L G
Sbjct: 1 MKGIILS-RHKIKVYGRQGKILPKGVEEEHTAFLHNLLSNDIKGMKEGSLLYNLWLRQNG 59
Query: 50 KILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+ F + K+ + ++L+ + + + KL V E + E
Sbjct: 60 TPIEDFFVYKLG-NYYLLDTEGD-ATKITQEFSRLKLSLRVYFEDLTQSLSHAFIFGEGA 117
Query: 110 FSNSSFIDERFSIA----------DVLLHR-----------TWGHNEKIAS--------D 140
F+ ERF + D+LL R G +K+
Sbjct: 118 RE---FVKERFGVTLEEGNVLELEDILLARNHIRLREEGYDILGSIQKLKELLKGVEMIS 174
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + ++RI + + + P +A + L ISLTKGCY+GQE ++R+ +R
Sbjct: 175 SEEFEDIRIENLVPRIRKELREG-FSPLEAGV-LNYAISLTKGCYVGQEAIARVYYRGRT 232
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ + G I + +IG + V + LA+ I + I + + T
Sbjct: 233 PRVLAKFEARN--VREGDKIKEGEKDIGIITSVNSRGDLALGYILRAKANIGEVLPCTAG 290
Query: 261 GVRV 264
VR+
Sbjct: 291 EVRL 294
>gi|269793838|ref|YP_003313293.1| folate-binding protein YgfZ [Sanguibacter keddieii DSM 10542]
gi|269096023|gb|ACZ20459.1| folate-binding protein YgfZ [Sanguibacter keddieii DSM 10542]
Length = 369
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/318 (19%), Positives = 107/318 (33%), Gaps = 55/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS+ + V G + +L +I + +L L + + + +L+P G + + + +
Sbjct: 44 VDLSHHGVVTVSGPDRLGWLNSITSQLLLDLGPRDSTETLVLSPHGHVEHAMSVV-DDGE 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSWNQEHT 109
T L + SK L L K V I V ++W
Sbjct: 103 TTWLVTEGSKAAELTAWLQRMKFMMRVEITDATDAWAVIGEPVDAEGTPDETVTWRDPWP 162
Query: 110 FSNSS-----FIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRINH 151
+ D+ + E +A + LRI
Sbjct: 163 RTREGGTRYGLPDDEHPGTERPWRLVLVPRETLAEAAAAREAAGWRLAGTWASEALRIAA 222
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
T+ + PH+ +D L + L KGCY GQE V+R+ + +R ++
Sbjct: 223 WRPRLATE-VDHKTIPHE--LDWLRTSVHLHKGCYRGQETVARVHNMGRPPRRLVMAHLD 279
Query: 211 DD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR------IDKV----DHAIK 252
LP G+ + D +GT+ V G ALA+ + +D + +
Sbjct: 280 GSGHLLPEVGAAVEAGDRSVGTVTSVARHHELGPVALAVVKRSTPTDVDLLVACDGGDVA 339
Query: 253 KGMALTVHGVRVKASFPH 270
G + V G V P
Sbjct: 340 AGQEVVVPGEGVSVDRPA 357
>gi|225447955|ref|XP_002269147.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|298204501|emb|CBI23776.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/315 (19%), Positives = 106/315 (33%), Gaps = 55/315 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIE 61
V LS+ I+V G I FL TA+ L + +TP + + + I K
Sbjct: 114 VDLSHFGRIRVSGDDRIQFLHNQSTANFECLQEGQGCDTVFVTPTARTIDVAHAWIMK-- 171
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------------- 96
+ L + S+I+ L Y ++ +EIQ
Sbjct: 172 -NAVTLVVSPVTCGSIIEMLTKYIFFAD-KVEIQDITKKTSFFVLVGPKSHQVMEDLNLG 229
Query: 97 --------------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
+NG+ ++ + S F + + I
Sbjct: 230 ALVGKPYGTHQHFMVNGMPITVGVGNAISEDGFSFMMSPAIAGSVWKALLSQGAIPMGSN 289
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ +LRI G P + + +A + N ISL KGCY GQE +SR+ + +++
Sbjct: 290 AWEKLRIFQGRPAPGKELT-NEFNVLEAGL--WNSISLNKGCYKGQETISRLITYDGVKQ 346
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMA 256
R I+ + GSPI D ++G L + L + + +
Sbjct: 347 RLWGISLSGP-AEPGSPITADGKKVGKLTSYACGRTESEHFGLGYIKRQAASNGNTVIVG 405
Query: 257 LTVHGVRVKASFPHW 271
+ G V+ F W
Sbjct: 406 DNIAGTVVEVPFLAW 420
>gi|291452306|ref|ZP_06591696.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355255|gb|EFE82157.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 325
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 25/285 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L +IT V LP A + +LT G I + +
Sbjct: 44 VDLSHRGVLTVTGDDRLSWLHLLITQHVSELPAGRATEALVLTANGHIEHALYLV-DDGT 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDER 119
T + ++ + +L+ L K V + ++ S ++ + E
Sbjct: 103 TTWVHVEPGTQGALLAYLESMKFFYRVEAADRTEEFALVHLPAGSIVSLAEGEAAAVRET 162
Query: 120 FSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
DV L R + A + + LR+ + PH+ +
Sbjct: 163 PYGRDVFLERGRLEEFAAAHGPAVGVLAHEALRVEAHRPRLGFE-TDHRTIPHELGW-IG 220
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEI 227
+ L KGCY GQE V+R+Q+ +R + + LP G+P+ D ++
Sbjct: 221 TAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPGPGTPVRLAADGPDGRKL 280
Query: 228 GTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
G + G ALA+ R VD + V V+
Sbjct: 281 GFVTTSARHHELGPIALALVKRNVPVDAELIAESTAAAQEVVVEP 325
>gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
gilvum PYR-GCK]
gi|315442670|ref|YP_004075549.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1]
gi|145214716|gb|ABP44120.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
gilvum PYR-GCK]
gi|315260973|gb|ADT97714.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1]
Length = 367
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 97/291 (33%), Gaps = 38/291 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L I + V LP + L QG+I + +
Sbjct: 42 SHRAVLTLTGGERKSWLHTISSQHVSELPDGAVTENLSLDGQGRIE-DHWVQTELNGRTV 100
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
++ + ++ ++L L S+V IE + V+ + + +
Sbjct: 101 IDTEPARGEALESFLRKMVFWSDVAIESSDLAVLSLLGPGVADPAVLTALGLDALPPEGT 160
Query: 115 FID-------ERFSIADV------------LLHRTWGHNEKIASDIKTYHELRINHGIVD 155
++ R ++V + + Y R+
Sbjct: 161 AVELADGGYVRRLPGSEVEVDLVVPRPEVTRWFDALVAAGVRPAGLWAYEAHRVAAQRPR 220
Query: 156 PNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210
D PH+ + + L KGCY GQE V+R+ + + +++ G
Sbjct: 221 LGID-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLVHLDGD 279
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
D P G P+L +G LG VV + + V + ALT G
Sbjct: 280 GDRPSPGDPLLAGGRAVGRLGTVVDHVDEGVIALALVKRGLPVDTALTTGG 330
>gi|309812600|ref|ZP_07706345.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185]
gi|308433451|gb|EFP57338.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185]
Length = 385
Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/302 (17%), Positives = 100/302 (33%), Gaps = 49/302 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS + ++V G + +L ++ T + L + + +L+P G + + E
Sbjct: 84 VDLSARGVVRVAGPDRLSWLHSMTTQHLADLAPFTSTETLVLSPHGHVEFALHVVDDGEA 143
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNS-------SF 115
T L D + L L + V + ++ + V+ N E + ++
Sbjct: 144 T-WLTTDPGRSAELAAWLRRMQFMLRVEVADVSDEHAVIGEVNDEESTPEQVRETGVIAW 202
Query: 116 IDERFSIADVLLH-----------RTWGH------------NEKIASDIKTYHELRINHG 152
D ++ V R W E + + LR+
Sbjct: 203 RDPWPALGPVSAAYGPSAQHPGSERRWRELIVPRERFEAVFAEAQPAGLWAAEALRVAAW 262
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D + + PH+ L + + L KGCY GQE V+R+ + +R +
Sbjct: 263 RPDGLLE-VDHRTIPHELDW-LRSAVHLQKGCYRGQETVARVHNLGRPPRRLAFVHLDGS 320
Query: 213 ---LPPSGSPILTDDIE--IGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGV 262
LP G+ ++ G L V G L + + + L + GV
Sbjct: 321 DHTLPEVGAEVMVPGAPRAAGRLTSVARHHIDGPIGLVVLK-----RSTPADAPLLIGGV 375
Query: 263 RV 264
Sbjct: 376 AA 377
>gi|300866104|ref|ZP_07110832.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria
sp. PCC 6506]
gi|300335900|emb|CBN55990.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria
sp. PCC 6506]
Length = 353
Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 99/300 (33%), Gaps = 49/300 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ ++V G+ + FL T + L + +T + + + I ED +
Sbjct: 49 THWGRLEVSGEDRLRFLHNQSTNNFNILQPGQGCDTVFVTSTARTI-DLATAIITEDKVL 107
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109
L + ++R L++ L Y V ++ S H+
Sbjct: 108 LLVSPNRRQKLLELLDRYIFPMDKVELKDVTDATATFSLIGPHSNKLLDKLGITGIEGKP 167
Query: 110 -----------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
+ S + L N I + + +
Sbjct: 168 YGTHKLIENTTTESSIRVVVGSGLATSGYTIIVDGNQAANLWDKLVQNGAIPAGDRVWEH 227
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI G P+ + P +A + L+ IS KGCYIGQE ++R+ ++++
Sbjct: 228 LRIEQGRPAPDFELT-DEYNPLEARL--LHTISYDKGCYIGQETIARLNTYKGVKQQLWG 284
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGV 262
+ + + G+ + + ++G L V G LA R +K + V
Sbjct: 285 LRLSGE-AEVGAAVTIGEEKVGKLTSFVVTDDGPFGLAYIRTKAGGEGLKVQVGEIEGEV 343
>gi|302531017|ref|ZP_07283359.1| glycine cleavage T protein [Streptomyces sp. AA4]
gi|302439912|gb|EFL11728.1| glycine cleavage T protein [Streptomyces sp. AA4]
Length = 373
Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 97/299 (32%), Gaps = 49/299 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G+ + +L +I+ V L + +L QG + +F+++ E T
Sbjct: 49 SHREILAVTGEERLSWLHLVISQHVTELAGNTGTEALVLDSQGHVDTHFVLAHAGE-TVY 107
Query: 67 LE----------IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----- 111
L+ + + + +L + L K S V I VLS T S
Sbjct: 108 LDSDPGPLVTSALPKGGKQTLREYLEAMKFWSKVEIRDATEELAVLSVLGPETDSVLGVE 167
Query: 112 --------------------------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ + R + + + T+
Sbjct: 168 LGTEPYSVAALPEGGFARRMPWPTRAGADLVVPRAQLTQ--WWQRLTDAGARPAGSWTFD 225
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ D PH+ + + + KGCY GQE VS++ + +
Sbjct: 226 ALRVESRHPRLGVD-TDERTIPHEVGW-IGSAAHVAKGCYRGQETVSKVHNVGRPPRYLA 283
Query: 206 IITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
++ P +G P+ + +G +G V L + V ++ G L
Sbjct: 284 LLHLDGSPEITPETGDPVKLGERVVGRIGTVAQHHELGPIALALVKRSVPGGAELLAGD 342
>gi|325109375|ref|YP_004270443.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305]
gi|324969643|gb|ADY60421.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305]
Length = 340
Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/318 (18%), Positives = 101/318 (31%), Gaps = 60/318 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + + G + FLQ T DV LP + I +G+ L + IS D
Sbjct: 25 LSTRDELTLTGSDRVSFLQGFCTNDVKRLPVGGVCEAFIPNVKGRTLGHVFIS-AGVDQL 83
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL-------------SWNQEHTFSN 112
L+ ++L+ L Y + +V + + + W
Sbjct: 84 TLDSVAQANETLLPHLDRYLIVEDVELTSTTADRRLFFVTGPKALQVISQVWPDAAALPP 143
Query: 113 SSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149
++FI+ V + R + D + +R+
Sbjct: 144 NAFIEVSAGEFPVTVRRVDWLGQPGFQIRVPAENGETVQSQIVQAGAVVGDESVWEAVRL 203
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRN----IIRKRP 204
+ D DF + D IS KGCY+GQE ++RI ++R
Sbjct: 204 EACLPDHGRDF-SEDNLAQEV--DRTEAAISFHKGCYLGQEPIARIDALGHVNWLLRGLK 260
Query: 205 MIITGTDDLPP-SGSPILTDD--IEIGTLGVVVG------------KKALAIARIDKVDH 249
+ + DL SG+ + D +GT+ V A+AI R ++
Sbjct: 261 LELPEDADLAEISGAELKVDGQEKPVGTVRSVAAIPCESGESPGRSCVAMAIVRREQSVA 320
Query: 250 AIKKGMALTVHGVRVKAS 267
+ V V
Sbjct: 321 ETVLQLETKSGAVPVTVF 338
>gi|239980446|ref|ZP_04702970.1| hypothetical protein SalbJ_13463 [Streptomyces albus J1074]
Length = 318
Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 25/285 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L +IT V LP A + +LT G I + +
Sbjct: 37 VDLSHRGVLTVTGDDRLSWLHLLITQHVSELPAGRATEALVLTANGHIEHALYLV-DDGT 95
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDER 119
T + ++ + +L+ L K V + ++ S ++ + E
Sbjct: 96 TTWVHVEPGTQGALLAYLESMKFFYRVEAADRTEEFALVHLPAGSIVSLAEGEAAAVRET 155
Query: 120 FSIADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
DV L R + A + + LR+ + PH+ +
Sbjct: 156 PYGRDVFLERGRLEEFAAAHGPAVGVLAHEALRVEAHRPRLGFE-TDHRTIPHELGW-IG 213
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEI 227
+ L KGCY GQE V+R+Q+ +R + + LP G+P+ D ++
Sbjct: 214 TAVHLQKGCYRGQETVARVQNLGKPPRRLVFLHLDGSEVHLPGPGTPVRLAADGPDGRKL 273
Query: 228 GTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
G + G ALA+ R VD + V V+
Sbjct: 274 GFVTTSARHHELGPIALALVKRNVPVDAELIAESTAAAQEVVVEP 318
>gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119870652|ref|YP_940604.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
KMS]
gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
KMS]
Length = 356
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 50/295 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L I + + + L QG++ +
Sbjct: 38 SHRATLALSGAERRSWLHTISSQHISDQADGTVTQNLSLDGQGRVE-DHWWQTELDGVLY 96
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------------GVVLSWNQ 106
L+ + + + L++ L ++V IE + G + + +
Sbjct: 97 LDTEPWRGEPLLNYLRRMVFWADVTIEPADLAVLSLLGPALADTPVLDALGLGSLPAEST 156
Query: 107 EHTFSNSSFID-------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
FI R +AD T + + Y R+
Sbjct: 157 AVALPGGGFIRRLPADGLELDLLVPRAQVADWRDRLTAAGVRP--AGVWAYEAHRVAALQ 214
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTD 211
D PH+ + + + L KGCY GQE V+R+ + + + + GT
Sbjct: 215 PRLGVD-TDERTIPHEVGW-IGSAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGTT 272
Query: 212 DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHG 261
D P +G P+L +G +G VV G ALA+ V + LT G
Sbjct: 273 DRPSTGDPVLAGGRTVGRVGTVVEHIDDGPVALAL-----VKRGLPADTPLTTGG 322
>gi|255577330|ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis]
gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative [Ricinus communis]
Length = 433
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 59/302 (19%), Positives = 104/302 (34%), Gaps = 57/302 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL--LYFLISKIEED 63
LS+ I+V G I FL TA+ L + +TP + L + I K +
Sbjct: 119 LSHFGRIRVSGDDRIQFLHNQSTANFQCLHEGQGCHTVFVTPTARTLDIAHAWIMK---N 175
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN-VIIEI---------------------------- 94
+ +L + S+ L Y ++ V I+
Sbjct: 176 SVMLVVSPVTCGSITQMLNKYIFFADNVEIQDITKKTSFFILAGPQSDQVMANLNLGDVV 235
Query: 95 ---------QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+NG+ ++ + S + S A + +T + +
Sbjct: 236 GQPYGTHLHYSVNGMPITVGAGNIISEYGYSLLMSSAAAESVWKTLLSQGAVPMGSNAWE 295
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+LRI GI P + + +A + N ISL KGCY GQE ++R+ + +++R
Sbjct: 296 KLRIIQGIPAPGKELT-NEFNVLEAGL--WNSISLNKGCYKGQETIARLITYDGVKQRLW 352
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMALTV 259
I + GS I D I++G L + L + + +G + V
Sbjct: 353 GIHLSAP-AEPGSLITVDGIKVGKLTSYTSGRNKPEHYGLGYIK----RQTVSEGSTVIV 407
Query: 260 HG 261
Sbjct: 408 GD 409
>gi|124516642|gb|EAY58150.1| putative aminomethyltransferase [Leptospirillum rubarum]
Length = 334
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 57/286 (19%), Positives = 91/286 (31%), Gaps = 54/286 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G+ FLQ I + D+L K S L P+ +IL ED L
Sbjct: 27 IFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIALFPPA 85
Query: 72 SKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHT-----------FSNSSF---- 115
R+ ++ L Y R+ I + + T FS SSF
Sbjct: 86 GTREEFVNHLKKYLFFRTKAKITDMSDHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145
Query: 116 --------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
++F L + + D +Y
Sbjct: 146 NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSNKGGVLLDESSYLAYLT 205
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GI ++ + FP +A +D + G+S KGCY+GQE V+R++ + + +
Sbjct: 206 EKGIPLFPSEL-NDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRL 263
Query: 210 TDDLPPSGS-PIL----TDDIEIGTLGVVVG----KKALAIARIDK 246
P P+ D E G L + + I +
Sbjct: 264 EGGPFPKMEFPVTLFNPKDGNEAGILTRTSSSDILGSGIGLGYIKR 309
>gi|308178160|ref|YP_003917566.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
gi|307745623|emb|CBT76595.1| putative aminomethyltransferase [Arthrobacter arilaitensis Re117]
Length = 360
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 36/274 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ LS+ +++ G+ +L + + + TL + + +L+ QG+I +
Sbjct: 44 AIADLSHFDVVEIRGEDRQSWLDTLSSQRISTLKPGQSTQTLLLSVQGRIEHEMKVLAT- 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120
ED +L + L+ L + V + ++ +GV+ + T + + +
Sbjct: 103 EDRLLLIAEPGAGAGLVQFLNSMRFMLRVEVNDLSATHGVLAATRTIDTAGSLIWQNPWP 162
Query: 121 SIADVLLH----------RTW------------GHNEKIASDIKTYHELRINHGIVDPNT 158
I++ R W E+ + + LRI
Sbjct: 163 GISEGGWAYSREDHPGKERAWFMHIIELDKLCEAVAEEELAGMMAVEALRIAAWEPRFGA 222
Query: 159 DFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LP 214
+ PH+ +D L + + KGCY GQE V+R+ + +R + + LP
Sbjct: 223 EI-DDKTIPHE--LDWLRTAVHMDKGCYKGQETVARVHNIGHPPRRMVFLDLDGSMHTLP 279
Query: 215 PSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243
+G+ + + +G + G ALA+ +
Sbjct: 280 ATGAEVKLGERTVGRITSATLHYEAGPIALAVIK 313
>gi|156082666|ref|XP_001608817.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796067|gb|EDO05249.1| conserved hypothetical protein [Babesia bovis]
Length = 324
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLIS 58
M L N+ + + GK ++ FLQ + + DV +L K + L G+IL L+S
Sbjct: 3 MICGRLRNRGLLTLSGKDSLSFLQGLTSTDVSSLTKNIKKIFPTLFLGSDGRILSDGLLS 62
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQE 107
+ + + +LE +L + + K+ + V I+ + ++ + Q
Sbjct: 63 R-DGERILLETASGNIPTLSNLIARRKVSAKVDYSIEKNYSVNAYIPKELLHLIRNGPQG 121
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--DIKT-YHELRINHGIVDP-NTDFLPS 163
T SN+S + +L R + + DI Y +G P +
Sbjct: 122 DTVSNTSLQPPDYECDMPILARKYIAYDATNQYRDITEPYRLYLTLNGFALPLPKEVKTL 181
Query: 164 TIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ P D + + ++ KGCY+GQE+++R+
Sbjct: 182 KLLPQDMFLHRMGLVAQNKGCYVGQEIMNRV 212
>gi|323359172|ref|YP_004225568.1| aminomethyltransferase [Microbacterium testaceum StLB037]
gi|323275543|dbj|BAJ75688.1| predicted aminomethyltransferase [Microbacterium testaceum StLB037]
Length = 362
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 106/283 (37%), Gaps = 45/283 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ L ++ I V G+ +L ++ + + L ++ IL PQG++ + +
Sbjct: 35 ALAPLGDRRVISVGGEDRRSWLDSLSSQALTHLAPGVSTEMLILDPQGRVEHAASVV-DD 93
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----FID 117
+T L +D + ++L L + R V ++ + + V+ ++ S S+ +ID
Sbjct: 94 GETAWLIVDATDIEALAGWLTRMRFRLRVEVKDRSDDLFVVGGTRDAVSSLSAVAPVWID 153
Query: 118 ERFSIADVLLH-----------RTWGHNEKIASD-----------------IKTYHELRI 149
++ R W A++ + LR+
Sbjct: 154 PWPDVSPGGWAYARVEPHPGADRDWAEAILDAAEFDRVIDAAVRGEVSLAGLDAVEALRV 213
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
D + PH+ MD L + L+KGCY GQE V+++ + +R + +
Sbjct: 214 AAWRPRVGVD-ADERLLPHE--MDWLRTAVHLSKGCYRGQETVAKVHNLGHPPRRVVALQ 270
Query: 209 GTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
LP G + D IG + V G ALA+ +
Sbjct: 271 LDGSDNVLPQRGDEVRVGDAVIGAITSVAVHHEEGPIALALIK 313
>gi|302520798|ref|ZP_07273140.1| glycine cleavage T protein [Streptomyces sp. SPB78]
gi|302429693|gb|EFL01509.1| glycine cleavage T protein [Streptomyces sp. SPB78]
Length = 326
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 96/275 (34%), Gaps = 17/275 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + +L+ G + + + +
Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T L ++ R++L L K V + + V+ + + E
Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L RT + A + LR+ + PH+ L +
Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LPP G+P+ D +G
Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPDSRVLGF 283
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ L + + + L
Sbjct: 284 VTTSARHHELGPIALGLIKRNVPVDAPLLAEETAA 318
>gi|301168528|emb|CBW28118.1| putative aminomethyltransferase [Bacteriovorax marinus SJ]
Length = 510
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 24/252 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ S V G+ F Q T D+++L +A + GKI +FL K + +
Sbjct: 19 LSDWSVYCVKGEDREKFFQGQTTNDLMSLNPNEFALNARVDRTGKIQFFFLNIKTSNELY 78
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ +S S I++L + + +V IE N TF + D +F
Sbjct: 79 LA-FPKSIAQSAIEELDKFIIMDDVEIEALDK-------NLYFTFLTTEASDNKFEGMLY 130
Query: 126 LLHRTWGHNE------KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ T E +I+++ Y L + +G D + + L DL GIS
Sbjct: 131 GVPATLSFEEIDKESKEISNEEIEY--LCVENGWPRWGVDITAGDLINNTRLNDL--GIS 186
Query: 180 LTKGCYIGQEVVSRIQH-RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
TKGC++GQE V++I++ R + + + G +D + G + +G A
Sbjct: 187 YTKGCFLGQETVAKIENGRGASFYPSFLTSPSVQKLEIGV-FKINDRKGGEVISKIGNVA 245
Query: 239 LAIA----RIDK 246
+ RID
Sbjct: 246 MVKLFREFRIDH 257
>gi|72163272|ref|YP_290929.1| hypothetical protein Tfu_2873 [Thermobifida fusca YX]
gi|71917004|gb|AAZ56906.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 343
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 89/279 (31%), Gaps = 24/279 (8%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ ++V G + +L + + + L A + ++ G+I + + +
Sbjct: 45 SNRGVVRVSGPDRLGWLHDLTSQHLRELAPGTATETLVMDANGRIKHHLSVV-DDGTALW 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------TFSNSSFI 116
++ + L+ L + V ++ V++ + + +
Sbjct: 104 AHVEPGTAEELVAFLQSMRFMLRVEVDDLSAERAVVTVAGPDRAAVLDAVRDSLPPETVL 163
Query: 117 DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D+ L + + Y RI D H
Sbjct: 164 RPAADETDLFLPAAALVEVTEALTAAGARPAGLWAYEARRIAAHRPRFGID-TDHRAIAH 222
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDI 225
+ + + + L KGCY GQE V+R+ + +R +++ LP G+ I D
Sbjct: 223 EMGW-IGSAVHLDKGCYPGQETVARVHNLGRPPRRLVMLHLDGTAERLPARGADIELDGR 281
Query: 226 EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+G +G L + V + V G+
Sbjct: 282 SVGFVGSSARHFELGPIALGLVKRTVPVDAEFVVDGIAA 320
>gi|32491186|ref|NP_871440.1| hypothetical protein WGLp437 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166393|dbj|BAC24583.1| ygfZ [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 309
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 39/265 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LSN +K+ G A+ LQ T++ L + SA +GK++ + +
Sbjct: 3 ICLSNLILVKIIGNDALKLLQNQFTSNFFCLKKNEFKFSAHCNEKGKVISNMCVFYYQNK 62
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------- 109
++ + + I+ L Y V I + ++ S+
Sbjct: 63 ISYIQ-PKIINFNQIEILKKYSTFYKVDIILNKELVLLGSYGTSAEKKIKSIFFEIPNEK 121
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-----------YHELRINHGI 153
+ + + + +F L+ E I +K + +++ + +
Sbjct: 122 NKVINYKDCAILYFKFKNPFYLIIINKRKREDIFYKLKLNNTFYNYKKYLFEIIKLKYPV 181
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
++P FP + ++ + I KGCY+GQE++ ++Q+ I +K I+ G
Sbjct: 182 IEP---ITSEHFFPQEINLNYFHAIDFNKGCYMGQELIYKMQYLKIKKKFLYILYGKSSF 238
Query: 214 PPSGSPILTDDIE-----IGTLGVV 233
P I+ + G + V
Sbjct: 239 LPKAGDIIEQKMINKWNFAGKILSV 263
>gi|254569948|ref|XP_002492084.1| Mitochondrial matrix protein [Pichia pastoris GS115]
gi|238031881|emb|CAY69804.1| Mitochondrial matrix protein [Pichia pastoris GS115]
gi|328351426|emb|CCA37825.1| Putative transferase CAF17, mitochondrial [Pichia pastoris CBS
7435]
Length = 476
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/443 (16%), Positives = 126/443 (28%), Gaps = 178/443 (40%)
Query: 8 NQSFIKVCGKSAIPFLQAII----------------TA-DVL---------TLPYKI--- 38
++ FI+V G + FL +I T D+ L +
Sbjct: 28 DKGFIQVQGPDSTEFLNGLITTMLLPTFTKKNQHTITNKDLQLEGILAKQIQLTPEEIKE 87
Query: 39 -------------------------ARGSAILTPQGKILLYFLISKIE---------EDT 64
+ L +G++ I E +
Sbjct: 88 TNWGILHEDSYLSDEDPMKLGIRRDGLYTLFLNSRGRVFSDAFIYPTPLIMEDSDTSEPS 147
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNSS 114
+++E+D + L + +KL + + + + + +E +TF N++
Sbjct: 148 YLVEVDHKITNQLFMMMNMHKLTAKIKLTKPELKSWYIYSEKEIFENYIYKIQNTFFNNA 207
Query: 115 --------------------------------FIDERFSIADV-LLHRTWGHNEKI---- 137
ID R + L+ T ++
Sbjct: 208 TSTDPETANISMQEFIRSRALLDSYSDDVKGFAIDNRSPYFGLKLVTGTALELSQLSPLR 267
Query: 138 -------ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
AS+ Y RI +GIV+P + ++ P + +D NGIS KGCY+GQE+
Sbjct: 268 NLDEIHMASNSSEYKLRRIINGIVEPADLDMEHSVLPFELNVDFTNGISFEKGCYVGQEL 327
Query: 191 VSRIQHRNIIRKRPMII----------------------------------------TGT 210
+R IIRKR M I
Sbjct: 328 TTRTYTTGIIRKRIMPIKLYDLTTIDKESLKDTISIEGDNFEPLLKSCRDIKIINENESE 387
Query: 211 DDLPPSGSPILTD--------------DIEIGTLGVVVGKKALAIARIDKVDHAIKKG-- 254
+ P +P T E+G L + LA+ + + G
Sbjct: 388 AEQPQEETPFATSPFGNSPTKRASKRKRSEVGKLLHMEKNIGLALVNLKHITPDNSIGHN 447
Query: 255 ---MALTVHG--VRVKASFPHWY 272
+ V G + VK P W+
Sbjct: 448 EFILDTKVDGKTIGVKVFIPDWW 470
>gi|318059665|ref|ZP_07978388.1| hypothetical protein SSA3_17091 [Streptomyces sp. SA3_actG]
gi|318077222|ref|ZP_07984554.1| hypothetical protein SSA3_10983 [Streptomyces sp. SA3_actF]
Length = 326
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 96/275 (34%), Gaps = 17/275 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + +L+ G + + + +
Sbjct: 47 VDLSHRGVLAVEGPERLAWLHLLLTQHVSALPAGQATEALVLSANGHVEHHLSLV-DDGT 105
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--FSNSSFIDERFS 121
T L ++ R++L L K V + + V+ + + E
Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L RT + A + LR+ + PH+ L +
Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LPP G+P+ + +G
Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPESRVLGF 283
Query: 230 LGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ L + + + L
Sbjct: 284 VTTSARHHELGPIALGLIKRNVPVDAPLLAEETAA 318
>gi|289164835|ref|YP_003454973.1| Hypothetical protein similar to glycine cleavage T protein
[Legionella longbeachae NSW150]
gi|288858008|emb|CBJ11868.1| Hypothetical protein similar to glycine cleavage T protein
[Legionella longbeachae NSW150]
Length = 336
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 28/224 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + V G A+ FLQ +T D+ ++ A +G+IL I
Sbjct: 41 LSYLAVLDVDGAKALDFLQGQLTCDIHSISDIKMLQGAQCNLKGRILSLMDIVSWHG--V 98
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123
L + + I+ L L S + ++ + N + N F +
Sbjct: 99 KLVLPNDLIEPTINSLNKTALLSRISLKTNDQLSIFGFYLQNDQDIIPNIKFFPDPHCAQ 158
Query: 124 DVLLHRTWGHNEK------IASDIK-----------------TYHELRINHGIVDPNTDF 160
+ + H I SD T+H LR+ ++
Sbjct: 159 TYNDYSCFYHLGNGFYILLIQSDFAHDIKQYFTDKSQILGSLTWHTLRLAQKQIEIYPS- 217
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
PH + + IS KGCY GQE+++R+ ++ ++ +
Sbjct: 218 SRGLFLPHRLDLHQTHYISFNKGCYKGQEIIARMHYKGTLKHQL 261
>gi|270156718|ref|ZP_06185375.1| putative glycine cleavage T protein [Legionella longbeachae D-4968]
gi|269988743|gb|EEZ94997.1| putative glycine cleavage T protein [Legionella longbeachae D-4968]
Length = 332
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 28/224 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + V G A+ FLQ +T D+ ++ A +G+IL I
Sbjct: 37 LSYLAVLDVDGAKALDFLQGQLTCDIHSISDIKMLQGAQCNLKGRILSLMDIVSWHG--V 94
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123
L + + I+ L L S + ++ + N + N F +
Sbjct: 95 KLVLPNDLIEPTINSLNKTALLSRISLKTNDQLSIFGFYLQNDQDIIPNIKFFPDPHCAQ 154
Query: 124 DVLLHRTWGHNEK------IASDIK-----------------TYHELRINHGIVDPNTDF 160
+ + H I SD T+H LR+ ++
Sbjct: 155 TYNDYSCFYHLGNGFYILLIQSDFAHDIKQYFTDKSQILGSLTWHTLRLAQKQIEIYPS- 213
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
PH + + IS KGCY GQE+++R+ ++ ++ +
Sbjct: 214 SRGLFLPHRLDLHQTHYISFNKGCYKGQEIIARMHYKGTLKHQL 257
>gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
gi|119958875|gb|ABM15880.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
Length = 361
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 99/292 (33%), Gaps = 40/292 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L I + V L + L QG++ + + +
Sbjct: 39 SHRAVLSLTGAERNSWLHTISSQHVSDLADGTVTENLSLDGQGRVE-DHWVQTQLDGRTV 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------SSFIDER 119
L+ + + + L+ L ++V++E + GV+ T +
Sbjct: 98 LDTEPWRGEPLLSFLRKMVFWADVVVEPADL-GVLSLLGPGLTDPAVLDAVGLPALPAPN 156
Query: 120 FSI---ADVLLHRTWGHNEKI----------------------ASDIKTYHELRINHGIV 154
++ + R G ++ + + Y R+
Sbjct: 157 SAVELPGGGFIRRLPGPAVEVDVVVPRDELAAWRDRLVAAGVRPAGVWAYEAHRVAARRP 216
Query: 155 DPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--G 209
D PH+ + + L KGCY GQE V+R+ + + +++ G
Sbjct: 217 RLGVD-TDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDG 275
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
D P +G P+L +G LG VV + + + + ALT G
Sbjct: 276 ASDRPSTGDPLLAGGRTVGRLGTVVDHVDEGVIALALLKRGLPADTALTTGG 327
>gi|326384540|ref|ZP_08206219.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395]
gi|326196674|gb|EGD53869.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395]
Length = 390
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/307 (18%), Positives = 106/307 (34%), Gaps = 59/307 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ I++ G + +L I + + L + + + L G+I +F+++ I+E T
Sbjct: 50 SDRAVIELSGPERLTWLHTISSQHLTHLADRRSAENLSLDGNGRIEDHFVLTDIDETT-W 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
++ + S+ SL D L + V +P V+ + +
Sbjct: 109 IDTEASRGQSLADFLTKMVFWAKVTPTARPDMAVLTLLGPDALTGPIAEIIALPSDAMPY 168
Query: 115 -------------------------------FIDERFSIADVL-LHRTWGHNEKIASDIK 142
+D D+ R + +
Sbjct: 169 QAGDLPELRHDDEPLGFWRVMPGIGEHGATPVVDLVVPEPDLREWWRLLTDAGAAPAGMW 228
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRN 198
Y LR+N + D PH+ D + L KGCY GQE V+R+ +
Sbjct: 229 AYEALRVNALRPRLHLD-TDERTIPHEVDWIGGPDEGGAVHLDKGCYRGQETVARVANLG 287
Query: 199 IIRKRPMIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDH 249
+R +++ P +G + +G +G V+ G ALA+ R VD
Sbjct: 288 RPPRRLVLLHLDGSSAYRPITGVAVTAGGRTVGRVGTVIDHFENGPIALALVKRNVPVDA 347
Query: 250 AIKKGMA 256
+ G A
Sbjct: 348 ELVVGDA 354
>gi|40063065|gb|AAR37921.1| conserved domain protein [uncultured marine bacterium 560]
Length = 229
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 41 GSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV 100
+A QGKIL F + + D ++ DS+ +L + L S+VII +
Sbjct: 1 MNAYCQHQGKILALFWVMRSGND-LLISFPLDLLDSIKSRLQMFVLMSDVIITDVTKQFL 59
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
+ + +S I+E+ S+ + + + + D + + I+ + + +
Sbjct: 60 QIG-AINISQKDSLTINEQLSLI-LTGPKNLSKFDLTSQD--HWDKACIDSFLPEVSI-A 114
Query: 161 LPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
T P +D+ G++ +KGC+ GQEVV+R+ + ++R L + +
Sbjct: 115 STETYIPQMLNLDINEVGVNFSKGCFPGQEVVARLHYLGKAKRRLFAFKSDFPLSINDTL 174
Query: 220 ILTDDIEIGTLGVVVGKK-------ALAIARIDKVDHAI----KKGMALT 258
+ G VV + LA ++ D+ I +G LT
Sbjct: 175 HCAESKSAKASGSVVSQVKFGSDFYCLATLEVENKDNKITINNDQGPTLT 224
>gi|237785004|ref|YP_002905709.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM
44385]
gi|237757916|gb|ACR17166.1| putative aminomethyltransferase [Corynebacterium kroppenstedtii DSM
44385]
Length = 448
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/323 (18%), Positives = 102/323 (31%), Gaps = 71/323 (21%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI-- 60
+V S+Q +++ G + +L ++I+ + L IL +G I F I +
Sbjct: 77 AVDRSHQRVLQISGADTLSWLNSLISQKIDALSPGSTTHGLILDAKGHIEHAFTIVRPQA 136
Query: 61 ------EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----------GVVLS 103
E+ + L D+L L S V + + V +
Sbjct: 137 SLPDRDEDPSIYLISGPDTFDALQTYLTQMVFWSAVSVHEADLALITVIGPDTSTVVAHT 196
Query: 104 WNQEHTFSNSSFIDERFSIAD-----------------VLLHR--------TWGHNEKIA 138
H S + ++ + +L+ R T
Sbjct: 197 LEDHHATSTLAATTPPDTLPEETITFTDPLVGTENSVHLLVPRPVLTDAFTTLIKAGAKP 256
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHD--------ALMDLLNG----------ISL 180
+ + Y RI I + + D PH+ A + L
Sbjct: 257 TGLMAYEAERIKAVIPEVHADL-DDRTVPHEIDSFIGTPANAPTQRATADDGPTVSYVHL 315
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV--- 234
KGCY GQE VSRIQ+ + + + P G I + ++G +G VV
Sbjct: 316 NKGCYRGQETVSRIQNLGRPPRLLVKLQVDGYSARRPEPGEAITSGKRKVGRIGTVVDDC 375
Query: 235 --GKKALAIARIDKVDHAIKKGM 255
G AL + + V+ I G
Sbjct: 376 DEGPIALGLVKRSIVEKLIGSGA 398
>gi|229489142|ref|ZP_04383008.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121]
gi|229324646|gb|EEN90401.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121]
Length = 373
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 89/294 (30%), Gaps = 44/294 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G + +L I + + LP + + L G++ +F+ + + T
Sbjct: 54 SHRFVIAIPGDERLTWLHTISSQHIAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107
++ + ++ L+ L S V+ E
Sbjct: 113 IDTEANRGPDLLSFLKKMVFWSKAEPRDGNELAVLSLIGPEASTVLAALEVQTPTEAYDA 172
Query: 108 HTFSNSSFID--------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
H ++ FI R +A + + LR+
Sbjct: 173 HALADGGFIRRMPWPTENSFDLLVPREQLA--AWWTRLTDAGAKPAGSWAFEALRVEATR 230
Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 231 PRLGLD-TDERTIPHEVHWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHL 289
Query: 210 TD---DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+P G PI +G +G VV L + + I L
Sbjct: 290 DGSAEAVPEPGDPITAGGRAVGRVGTVVNHHELGPIALALIKRNIPVDTELMAG 343
>gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
Length = 393
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 62/296 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ ++V G + +L ++ + + L + +L+P G + + L+ + +
Sbjct: 60 SHRGVVRVTGPDRLTWLHSLTSQHLSALRPLRGTEALLLSPHGHVEHH-LVLADDGQATL 118
Query: 67 LEI----DRSKRDSLIDKLL---FYKLR---SNVIIEIQ-------------------PI 97
+++ D S + + L + LR ++V
Sbjct: 119 IDVEPAGDASSGAVALTRFLESMRFLLRVEPADVTAATAVLSLVGPQAAATVAQALGADA 178
Query: 98 NGVVLSWNQEHTFSNSSFIDE--RFSIA---------------DVLLHRT--------WG 132
V W + E R+ +A D+L+ R+
Sbjct: 179 ADVPADWAAPTGDGAAGLPAEAGRYPVARFGPDVLARRMPYGVDLLIERSGLASVAERLR 238
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+ + + +RI D PH+ L + L KGCY GQE V+
Sbjct: 239 AAGATVAGLDAFEAIRIAAQRPRLGAD-TDHRTIPHEVGW-LTGAVHLDKGCYRGQETVA 296
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243
R+ + +R +++ + GSP+ T ++G +G +G ALA+ +
Sbjct: 297 RVHNLGRPPRRLVLLHLDGAVAAPGSPVTTAGRQVGFVGSSRMHAELGPVALAMVK 352
>gi|22299492|ref|NP_682739.1| hypothetical protein tlr1949 [Thermosynechococcus elongatus BP-1]
gi|22295675|dbj|BAC09501.1| tlr1949 [Thermosynechococcus elongatus BP-1]
Length = 313
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 91/272 (33%), Gaps = 41/272 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + FL + + L L + LT + L + + ++
Sbjct: 18 SHWGRLRLTGGDRLQFLHNQSSNNCLVLQAGQGADTVFLTSTARTL-DLVTLLVHQEWVD 76
Query: 67 LEIDRSKRDSLIDKLLFYKLR-----------------------SNVI--IEIQPI---- 97
L + +R+ L+ L Y + + + P+
Sbjct: 77 LLVSPQRREFLLKWLEKYIFFGDDVQLSDRTPESYCYRVFGSVAAKITAQFGLDPLANPY 136
Query: 98 NGVVLSWNQEHT--FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
+ V + + S ++ R SD + LRI G
Sbjct: 137 DHVTIPHADAPLTLAATSGLAIPGLTLWSDRPLRDLLSPYPQLSD-ADWEHLRIRQGRPA 195
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ + P +A + + IS KGCYIGQE ++R+ +++ + T + P
Sbjct: 196 ADAELT-EEYNPLEARLG--HTISFNKGCYIGQETIARLNTYQGVKQHLWGLELTATVTP 252
Query: 216 SGSPILTDDIEIGTLGVVV----GKKALAIAR 243
+P++ + ++G + G L R
Sbjct: 253 P-TPLILEGEKVGLVTSCTPLGKGAFGLGYVR 283
>gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
Length = 376
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 52/301 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ F+ V G+ + +L +I+ V L + +L QG++ + +++ ++ T
Sbjct: 49 SHREFLAVTGEDRLSWLHLVISQHVTGLAEGSGTEALVLDSQGRVETHMVLAHLDG-TVY 107
Query: 67 LE----------IDRSKRDSLIDKLLFYKLRSNVII------------------------ 92
L+ + + +L + L K S V I
Sbjct: 108 LDTDPGPSVTSALPKGGPQTLREYLEAMKFWSKVDIRDATGELALLTVLGPDAERVLSAV 167
Query: 93 --EIQPINGVVLSWNQEH-----TFSNSSFID---ERFSIADVLLHRTWGHNEKIASDIK 142
E+ P V + + S +D R ++ D + A+
Sbjct: 168 GAEVGPEPYAVAALPGGGFARRMPWPGRSSVDLAVPREALVD--WWKRLTDAGARAAGSW 225
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ LR+ D PH+ + + + KGCY GQE VS++ + +
Sbjct: 226 VFDALRVESLRPRLGVD-TDDRTIPHEVGW-VGSAAHVAKGCYRGQETVSKVHNVGRPPR 283
Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+++ P G P+L D +G +G V+ L + V + G L
Sbjct: 284 NLLLLHLDGSPEVTPEPGDPVLLDGRTVGRIGTVIQHHELGPIALALVKRSTPVGAELLA 343
Query: 260 H 260
Sbjct: 344 G 344
>gi|23012287|ref|ZP_00052410.1| COG0354: Predicted aminomethyltransferase related to GcvT
[Magnetospirillum magnetotacticum MS-1]
Length = 114
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTL 230
MD L G+ KGCY+GQEVVSR+QHR R R + + P G+ + +GT
Sbjct: 1 MDQLGGVDFKKGCYVGQEVVSRMQHRGTARTRILPLVYRDGPAPEPGTEVTAGARSLGTT 60
Query: 231 GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
G G LA R+D++ A+ G + G P
Sbjct: 61 GSAAGDWGLATIRLDRLGDALAAGEPVRAGGRLAAVGKPD 100
>gi|239918221|ref|YP_002957779.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
gi|281415587|ref|ZP_06247329.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
gi|239839428|gb|ACS31225.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
Length = 398
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 92/297 (30%), Gaps = 58/297 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS+++ + V G + +L + T V LP + L QG+I + + +
Sbjct: 52 ALVDLSHRAVLSVSGPDRLSWLHTLGTQHVEALPPGTSTEILFLDVQGRIEHAAHLLE-D 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDERF 120
L DR L L + +V + VV + + + + + +
Sbjct: 111 GAAAWLVTDREDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPW 170
Query: 121 SIADVLLHRTWGHNEKIASDIKTY-----------------------------------H 145
+ A +
Sbjct: 171 PRVGAGGWAYTADPDPEAHPGADWAWREYLVTRADLEATVRALGTGALAGWSLAGTTAAE 230
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LRI G D + PH+ + L + L KGCY GQE V+R+ + +R
Sbjct: 231 ALRIEAGRPRRALD-VDDRAIPHELDL-LRTAVHLDKGCYRGQETVARVHNLGRPPRRLT 288
Query: 206 IITGTD---DLPPSGSPIL-----------TDDIEIGTLGVV-----VGKKALAIAR 243
+ LP G+P++ +GT+ G ALA+ +
Sbjct: 289 RLLLDGSVHGLPEHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLK 345
>gi|226308307|ref|YP_002768267.1| hypothetical protein RER_48200 [Rhodococcus erythropolis PR4]
gi|226187424|dbj|BAH35528.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 373
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 86/294 (29%), Gaps = 44/294 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G + +L I + + LP + + L G++ +F+ + + T
Sbjct: 54 SHRFVIAIPGDERLTWLHTISSQHIAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
++ + + L+ L S V+ E S+
Sbjct: 113 IDTEADRGPDLLSFLKKMVFWSKAEPRDGNELAVLSLVGPESPAVLSAIGVQTPTDAYDA 172
Query: 115 ---------------------FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
+ R +A + + LR+
Sbjct: 173 LALADGGFVRRMPWPTEDSFDLLVPREQLA--AWWTKLTDAGAKPAGSWAFEALRVEARR 230
Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 231 PRLGLD-TDERTIPHEVHWIGGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHL 289
Query: 210 TD---DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+P G PI +G +G VV L + + I L
Sbjct: 290 DGSAEAVPEPGDPITAGGRAVGRVGTVVNHHELGPIALALIKRNIPVDTELMAG 343
>gi|289705058|ref|ZP_06501469.1| folate-binding protein YgfZ [Micrococcus luteus SK58]
gi|289558221|gb|EFD51501.1| folate-binding protein YgfZ [Micrococcus luteus SK58]
Length = 398
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/297 (17%), Positives = 93/297 (31%), Gaps = 58/297 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS+++ + V G + +L + T V TLP + L QG+I + + +
Sbjct: 52 ALVDLSHRAVLSVSGPDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLE-D 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDERF 120
L DR L L + +V + VV + + + + + +
Sbjct: 111 GAAAWLVTDREDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPW 170
Query: 121 SIADVLLHRTWGHNEKIASDIKTY-----------------------------------H 145
+ A +
Sbjct: 171 PRVGAGGWAYTADPDPEAHPGADWAWREYLVTRADLEATARALGTGALAGWSLAGTTAAE 230
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LRI G D + PH+ + L + L KGCY GQE V+R+ + +R
Sbjct: 231 ALRIEAGRPRRALD-VDDRAIPHELDL-LRTAVHLEKGCYRGQETVARVHNLGRPPRRLT 288
Query: 206 IITGTD---DLPPSGSPIL-----------TDDIEIGTLGVV-----VGKKALAIAR 243
+ LP G+P++ +GT+ G ALA+ +
Sbjct: 289 RLLLDGSVHALPEHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLK 345
>gi|71032799|ref|XP_766041.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352998|gb|EAN33758.1| hypothetical protein TP01_0521 [Theileria parva]
Length = 348
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+N+ I++ G+ + FLQ +I++D+ + R + L+ QG I+ LI E D
Sbjct: 3 RLNNRVIIRLFGQDSFNFLQGLISSDLRLVKADETRPALFLSAQGHIVAESLIFTHEGD- 61
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------HTFSNSSFI 116
+ L+ + + +++ + KL S V + V + + E T N + I
Sbjct: 62 YYLDSLKINHNKILNIINKRKLASKVQTDTTESEVYVSTLDSEFYTHFKPGKTKENKNLI 121
Query: 117 DERFSIADVLLHRTW--------------------GHNEKIASDIKTYHELRINHG---- 152
+ + HR + + +K ++ Y +L + +
Sbjct: 122 KLLDTRNRLFGHRYYWISNNTVCGLDQVESNKLGNNNLDKNQENLSVYDKLLLMNNYLMD 181
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ F + P D + N IS KGCY+GQE+++RI ++ +I K + I +DD
Sbjct: 182 LMMNEDGFEKYKLMPFDLNLQNFNYISSDKGCYVGQEIINRINNKVLINKYKLYIAVSDD 241
Query: 213 L 213
L
Sbjct: 242 L 242
>gi|256831685|ref|YP_003160412.1| folate-binding protein YgfZ [Jonesia denitrificans DSM 20603]
gi|256685216|gb|ACV08109.1| folate-binding protein YgfZ [Jonesia denitrificans DSM 20603]
Length = 389
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 56/306 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G +L +I + ++ TL + + +++P+G + + + DT
Sbjct: 57 SHLHIIAVTGPDRRSWLNSITSQELTTLAPRTSTELLVMSPKGHLEHSAAVV-DDGDTTW 115
Query: 67 LEIDRSKRDSLIDKLL--FYKLR---SNVI---------IEIQPINGVVLSWNQEHTF-- 110
L + S L L + +R S+V I + +G L+WN
Sbjct: 116 LITEPSHAHDLTTWLDSMRFAMRVTVSDVTDQWALLGEAINAESQDGEPLAWNDPWPTVL 175
Query: 111 ------------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ R +AD + R H+ + +RI
Sbjct: 176 DGGTRYGPDAPDHAGTDRPWRLVLIPRTDLADEIRQRQ--HSGWTLAGTWATEAIRIAAW 233
Query: 153 IVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
T+ + PH+ +D L + L KGCY GQE ++R+ + +R +++
Sbjct: 234 RPRLATE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETIARVHNLGRPPRRLVMLHLDG 290
Query: 212 D---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTV--HG 261
+P G+P+ + +IG + V G ALA+ + A ALTV G
Sbjct: 291 SGHFIPEPGAPVHLEGRDIGHVTSVARHHDNGPIALAVIK-----RATPDDAALTVVCDG 345
Query: 262 VRVKAS 267
V A+
Sbjct: 346 GDVTAA 351
>gi|333025477|ref|ZP_08453541.1| hypothetical protein STTU_2981 [Streptomyces sp. Tu6071]
gi|332745329|gb|EGJ75770.1| hypothetical protein STTU_2981 [Streptomyces sp. Tu6071]
Length = 326
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 22/259 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ + V G + +L ++T V LP A + +L+ G + + + +
Sbjct: 47 VDLSHRGVLTVEGPERLAWLHLLLTQHVSELPAGQATEALVLSANGHVEHHLSLV-DDGT 105
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFIDERFS 121
T L ++ R++L L K V + + V+ + + E
Sbjct: 106 TTWLHVEPGTREALAGYLESMKFFYRVEVVDRTAEYAVVHLPAGSITPTPEGAAVRETPD 165
Query: 122 IADVLLHRT----WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L RT + A + LR+ + PH+ L +
Sbjct: 166 GRDVFLPRTDLAAFAEAAGPAIGLLALEALRVEAQRPRLGFE-TDHRTIPHEVGW-LASA 223
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILT-----DDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LPP G+P+ + +G
Sbjct: 224 VHLDKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVHLPPHGAPLRLAADGPESRVLGF 283
Query: 230 LGVVV-----GKKALAIAR 243
+ G AL + +
Sbjct: 284 VTTSARHHELGPIALGLIK 302
>gi|283457493|ref|YP_003362073.1| putative aminomethyltransferase [Rothia mucilaginosa DY-18]
gi|283133488|dbj|BAI64253.1| predicted aminomethyltransferase related to GcvT [Rothia
mucilaginosa DY-18]
Length = 424
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 51/285 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G +L +I + + + +R +L+PQG++ + + +
Sbjct: 86 SSLGVVRVEGPDRQTWLTSIASQILTGMTAGESREFLLLSPQGRVEYAPAAIE-DGEALW 144
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
L ++ + L D L K V ++ VL + + S
Sbjct: 145 LIVEGYQAQPLTDYLNRMKFMMRVEVQNLSDEYAVLESARNPILQDGSVYPALAETKPLV 204
Query: 115 FIDERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELR 148
+ D + A +L ++ + + LR
Sbjct: 205 WEDPWHTPAPGSYRYDEAGDAHPGADYVRFLSIVPRSVLPALAESSDARFAGLWAAEALR 264
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I T+ P + + KGCY GQE V+R+ + +R + +
Sbjct: 265 IEAWRPRYGTE-ADDKTIPQELDYTRT-AVHFDKGCYKGQETVARVHNLGRPPRRLVFLD 322
Query: 209 GTDD---LPPSGSPILTDDI--EIGTLGVV-----VGKKALAIAR 243
LP +GS + + +G + V G ALA+ +
Sbjct: 323 IDGSEHTLPAAGSELFVEGKSRPVGRITSVALHHEAGPIALAVIK 367
>gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
Length = 368
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/301 (17%), Positives = 109/301 (36%), Gaps = 41/301 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G + +L +++T + L + + L+P G + + +++++ T
Sbjct: 45 SDRDVLVVPGADRLTWLHSLLTQHLEQLGDGVGAEALELSPNGHVEHHLVLAELAGST-W 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFIDERFSIA 123
++++ +L L + V + +LS + + + A
Sbjct: 104 VDVEPGTGAALQTYLERMRFLLRVEPALVTGAWALLSLAGPRGDEVLAAAGLPVPALPYA 163
Query: 124 -----------------------DVLLHR--------TWGHNEKIASDIKTYHELRINHG 152
D+L+ R + + Y LR+
Sbjct: 164 VLALDGGGWVRRMPPIGDGAPVVDLLVPRGELAARADALLAAGAAPAGVDAYEALRVEAR 223
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD- 211
D P++ L + + L KGCY GQE V+R+ + +R +++
Sbjct: 224 RPRLGVD-TDHRTIPNETGW-LTSAVHLAKGCYRGQETVARVHNLGRPPRRLVLLHLDGL 281
Query: 212 --DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LP +G+P+ ++G +G VV L + + V ++ LTV G R A P
Sbjct: 282 AEQLPEAGTPVQLGARDVGRVGSVVRHHELGVVALALVKQSVAMDAELTVAGARA-AIDP 340
Query: 270 H 270
Sbjct: 341 D 341
>gi|254499306|ref|ZP_05111978.1| aminomethyltransferase [Legionella drancourtii LLAP12]
gi|254351461|gb|EET10324.1| aminomethyltransferase [Legionella drancourtii LLAP12]
Length = 322
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 28/224 (12%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ + + G+ AI FLQ +T +V ++ A +G+IL I +
Sbjct: 36 LAHLGVLDILGEKAIEFLQGQLTCNVQSISDIQIIQGAQCNLKGRILALMDIINWQG--I 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--WNQEHTFSNSSFIDERFSIA 123
L + + ++ I L L S V + V+ N + ++SF +
Sbjct: 94 KLVLPKDLMEATIKSLNKTALLSRVALSENNELCVLGFYLQNPKDLVPDTSFFTDNLYGL 153
Query: 124 DV--------LLHRTWGHNEKIASDIK---------------TYHELRINHGIVDPNTDF 160
L H + + K T+H LR+ + +
Sbjct: 154 TYGSQYCCYHLGHGFYIFLAQAEFAKKVSLHFAEKNQLLGSLTWHSLRLAKQQITIYPE- 212
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
PH + +S KGCY GQE+++R+ ++ I+ +
Sbjct: 213 SRGLFLPHRIDLHQTPYLSFNKGCYKGQEIIARMHYKATIKHQL 256
>gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a]
gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 363
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 108/310 (34%), Gaps = 50/310 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V S++ +++ G + +L +I + + L + +L+PQG + + L+ +
Sbjct: 29 ALVDRSHREVVRIGGPDRLSWLHSITSQHLSGLGALRGSEALVLSPQGHVEHH-LVLADD 87
Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR---SNVIIEIQPINGVVLS------------- 103
++++ L+ L + LR ++V ++ V +
Sbjct: 88 GTATWVDVEPGTAAGLLRYLESMRFLLRVEPADVSARTAVLSVVGPAAVPTVAAALGGAD 147
Query: 104 ------WNQEHTFSNSSFIDERFSIADVLLHRT--------------------WGHNEKI 137
E T + + AD L R +
Sbjct: 148 LDLPEPLALEPTGAPVTGPYPVARAADGTLVRRMAYGVDLLVDRATLAATAQRLLAAGAV 207
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ + + LRI + PH+ L + + L KGCY GQE V+R+ +
Sbjct: 208 PAGLSAFDALRIAARRPRLGRE-TDHRTIPHEVGW-LADAVHLDKGCYRGQETVARVHNL 265
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+R +++ + GS + D E+G +G + L + V ++ G AL
Sbjct: 266 GRPPRRLVLLHLDGTVAAPGSAVTADGREVGFVGTSEMHEELGPIALAIVKRSVPAGAAL 325
Query: 258 TV---HGVRV 264
V G V
Sbjct: 326 VVTDPDGAPV 335
>gi|113478071|ref|YP_724132.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
gi|110169119|gb|ABG53659.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
Length = 349
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 53/300 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ + FL T + L + + +TP + + + + E
Sbjct: 44 SHWGLIQISDDERLRFLHNQSTNNFNILQPGQSCETVFVTPTARTI-DLATAYVTESLVF 102
Query: 67 LEIDRSKRDSLIDKLLFYKLR--SNVIIEIQPINGVVLSW-------------------- 104
L + S+ L++ Y L V ++ + S
Sbjct: 103 LLVSPSRCQKLVEWFDRY-LFPMDKVEVKDVSSEYAIFSLIGIEGKNLIAKLGATTPSDI 161
Query: 105 -NQEHTFSNSSFIDERFSIADVL----------------LHRTWGHNEKIASDIKTYHEL 147
+ H + ++ R ++ L + + + + +L
Sbjct: 162 THASHQLISLKNLEVRVAVGSGLTKEGYTLIVPVNNAAEVWQMLVEAGATPMGDRLWQQL 221
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI G P+ + P +A + N IS KGCYIGQE ++R+ +++R +
Sbjct: 222 RIEQGRPAPDYELT-DDYNPLEAGL--WNTISFEKGCYIGQETIARLNTYKGVKQRLWGV 278
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV----VVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ G+ + D ++G L G LA + A G+ + V V
Sbjct: 279 RLNGKV-ELGNVVQIGDKKVGKLTSFTETNEGYFGLAYIKT----KAGGVGLKVQVGDVE 333
>gi|206603597|gb|EDZ40077.1| Putative aminomethyltransferase [Leptospirillum sp. Group II '5-way
CG']
Length = 334
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 56/285 (19%), Positives = 88/285 (30%), Gaps = 56/285 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ FLQ I + D+L K S L P+ +IL ED L
Sbjct: 27 IFIEGEDRKTFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNF-EDKIGLFPPA 85
Query: 72 SKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHT-----------FSNSSF---- 115
R+ I+ L Y R+ I + + T FS SSF
Sbjct: 86 GTREEFINHLKKYLFFRTKAKITDMSEHFREIRLVGPETISVLLSLFDNNFSGSSFRMLK 145
Query: 116 --------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
++F L + +Y
Sbjct: 146 NGGYVLIHPTSFQHNLDVGLQADLFIPIDQFETTQKSLEDFTSKKGGVLLSESSYLTYLT 205
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
GI ++ + FP +A +D + G+S KGCY+GQE V+R++ + + + +
Sbjct: 206 EKGIPLFPSEL-NDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFSL 263
Query: 210 TDDLPPSGS-PIL----TDDIEIGTLGVVV------GKKALAIAR 243
P P+ D E G L L +
Sbjct: 264 EGAAFPKMEFPVTLFNPKDGNEAGILTRTSFSDILGSGIGLGYLK 308
>gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c [Mycobacterium abscessus ATCC 19977]
gi|169239798|emb|CAM60826.1| Conserved hypothetical protein (glycine cleavage T-protein
aminomethyl transferase?) [Mycobacterium abscessus]
Length = 364
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 56/305 (18%), Positives = 99/305 (32%), Gaps = 42/305 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ S ++ + + G + +L + + V L + R + L QG++ + +
Sbjct: 35 LIDRSTRAVLALSGPERLSWLHTVSSQHVADLRHGQTRENLSLDGQGRVE-DHWVQTDLD 93
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116
L+ + + L D L S V + + L + I
Sbjct: 94 GITYLDTESWRGQPLKDFLTKMVFWSKVEVAAADLKVFTLLGPDTAGLAEKLGIAALPEL 153
Query: 117 DERFSIADVLLHR--TWGHNEKI------------------ASDIKTYHELRINHGIVDP 156
D ++ D L R W E + + + LR+
Sbjct: 154 DNAVALPDGGLIRRVPWPLAEATYDLLVPSGKGLAERLGVRPAGLWAFEALRVAATRPRL 213
Query: 157 NTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GT 210
D PH+ D + L KGCY GQE V+R+ + + +++ G+
Sbjct: 214 TLD-TDERTIPHEVGWIAIGDDPRAVHLAKGCYRGQETVARVHNLGKPPRALVLLHLDGS 272
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKG--MALTVHGVR 263
D P G + +G +G VV G ALA+ + V A+ G LT
Sbjct: 273 ADRPAPGDEVAAAGRAVGRVGSVVDHVDLGPIALALVK-RSVIEALANGNPAPLTAGPSP 331
Query: 264 VKASF 268
Sbjct: 332 AAVDL 336
>gi|298491650|ref|YP_003721827.1| folate-binding protein YgfZ ['Nostoc azollae' 0708]
gi|298233568|gb|ADI64704.1| folate-binding protein YgfZ ['Nostoc azollae' 0708]
Length = 326
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/304 (17%), Positives = 95/304 (31%), Gaps = 52/304 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V + FL T D L + ++T + + + + +D
Sbjct: 27 SEWGIIRVADDDRLRFLHNQSTNDFQRLKPGEGCDTVMVTSTARTI-DLVTGYVLDDAVF 85
Query: 67 LEIDRSKRDSLIDKLLFYKLR----------------------SNVIIEIQP-------- 96
L + +R L+ L Y S+ +IE
Sbjct: 86 LLVSPGRRHFLLQWLDRYIFFTDKVQLTDITEDTGTFSLIGPGSDAMIEKLGAGSLIGQP 145
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKTYHELRI 149
++G+ ++ + I F IA + + + + LRI
Sbjct: 146 YGSHILVDGLRVAVGSGLALPGYTLI---FPIAQKQKIWEQILEYGGLELSDRGWEMLRI 202
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G P+ + P + + +S KGCYIGQE ++R+ +++ I
Sbjct: 203 LQGRPAPDLELT-DDYNPLEVGLWQT--VSFNKGCYIGQETIARLNTYKGVKQYLWGIRL 259
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ P + I D ++G L G L R +K + T V
Sbjct: 260 NAPVEPE-TIITIGDEKVGKLTSYTETPDGHFGLGYIRSKAGGVGLKVQVGETAGEV--- 315
Query: 266 ASFP 269
S P
Sbjct: 316 VSIP 319
>gi|220907953|ref|YP_002483264.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425]
gi|219864564|gb|ACL44903.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425]
Length = 325
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 51/297 (17%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V + FL T + L + I+ + L + + + ED IL
Sbjct: 22 WGRIQVTNSDRLAFLHNQSTNEFKLLKPGQGCDTVIVNSTARTL-DLVTAYVTEDAVILL 80
Query: 69 IDRSKRDSLIDKLLFYKLR-SNVIIE-----------IQPINGVVLSWNQEHTFSNSSFI 116
+ KRD L+ L Y V + I P + +L+ T + +
Sbjct: 81 VSPQKRDFLLKWLDRYIFFGDKVKLTDITAVTAAFSLIGPQSSALLTELGVETSTLGRYG 140
Query: 117 DERFSIADVLLHRT--------------------------WGHNEKIASDIKTYHELRIN 150
D + R I+ D + +LR++
Sbjct: 141 DHLLCELAGMPVRVVLGSGLALPGYTLLTDAEHAGNLNDQLIAAGAISLDETAWQQLRLH 200
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G + + P +A + + IS KGCYIGQE ++R+ ++++ I +
Sbjct: 201 QGRPQADAELT-EDYNPLEAGL--WHTISFNKGCYIGQETIARLNTYQGVKQQLWGIQLS 257
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVR 263
L +G+ I + +IG L + G L + A G+A+ +
Sbjct: 258 T-LVAAGTTITQEGNKIGLLTSAILTPEGPFGLGYVKT----KAGGAGLAVEIGDAT 309
>gi|319442498|ref|ZP_07991654.1| putative aminomethyltransferase [Corynebacterium variabile DSM
44702]
Length = 394
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/318 (19%), Positives = 107/318 (33%), Gaps = 59/318 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT--- 64
++ + V G+ A +L I+ V A +L QG++ F IS ++ D
Sbjct: 57 DRVALLVTGEEARSWLNGFISQKVDAAQPGTATDGLLLDAQGRVEQEFGISVVDLDGSPA 116
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-------------EIQPIN-GVVLSWNQEHTF 110
++++ D+L D L + V I E P G +
Sbjct: 117 VLMDVAADHADALEDFLRRMVFWARVEISRPELTRLSLLGREADPDFPGPGHAGTATPLA 176
Query: 111 SNSSFIDERF-----------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
++ F R + D L+ A D + R G+
Sbjct: 177 PSADFWRTRVTSGVPVTDLWVPRSELKPVWDALVETGARPTGGAAVDAWRLRDRRPVLGV 236
Query: 154 VDPNTDFLPSTI-FPHDALMDLL------------NGISLTKGCYIGQEVVSRIQHRNII 200
D + +P + A +D + + L KGCY GQE VSR+ +
Sbjct: 237 -DTDDRLIPHEVPAWIGAGIDGATRLADATEGPTGSAVHLNKGCYRGQETVSRVHNLGRP 295
Query: 201 RKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIK 252
+ +++ LP G+ + +G +G V G ALA+ + V A+
Sbjct: 296 PRLLVLLQLDGSAGRLPDIGADVTAGGRTVGRMGTPVQDADYGPVALALVK-RAVVEAVA 354
Query: 253 KG--MALTVHGVRVKASF 268
+G L V GV
Sbjct: 355 EGTAPPLQVDGVDAAIDR 372
>gi|317968602|ref|ZP_07969992.1| hypothetical protein SCB02_03593 [Synechococcus sp. CB0205]
Length = 286
Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 97/281 (34%), Gaps = 41/281 (14%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-----------LYFLIS 58
S I++ G FL + + + +++P ++ ++
Sbjct: 12 SLIRLEGSDTRRFLHGQSSQAIELAKAGDCLPTCLISPTARMRGLALVCVDDAGADLIVI 71
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++DR + +L I+P + W + +S +
Sbjct: 72 AGNGEAIRADLDRVLFPADNVRL----------GAIEP--ATLWQWQGDAQTEDSVLLRP 119
Query: 119 -----RFSIADVLLHRTWGHNEKIASDIKTY-----HELRINHGIVDPNTDFLPSTIFPH 168
A V+L R+ +D+ + R+ HG+ ++ P
Sbjct: 120 GVDLGSGPNAAVVLQRSDEELPPWLADLPEWSGEQVEANRLRHGLPAEPSEL-NDDTNPF 178
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ + +SL KGCY+GQE ++++ + ++++ ++ L P + G
Sbjct: 179 ELGLAQW--VSLNKGCYVGQETLAKLATYDGVKQQLRYWESSEALEPGTTLSSAGGERAG 236
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ G + LA+ R +++ + L G V S P
Sbjct: 237 VVTSSQGGRGLALIRRSQLEAST-----LHAGGTEVTISTP 272
>gi|223590165|sp|A5DQ50|CAF17_PICGU RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|190348778|gb|EDK41303.2| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC
6260]
Length = 436
Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 89/305 (29%), Gaps = 103/305 (33%)
Query: 10 SFIKVCGKSAIPFLQAIITA----DVLTLP------------------------------ 35
+ I++ G A F+ ++T D++
Sbjct: 13 ALIRIHGPDATKFVNGLVTTRLLPDIVKKKQHTISENENSHQELSQIIDVHRNWGLMHED 72
Query: 36 ----------YKIARGSAILTPQGKILLYFLISKI--------EEDTFILEIDRSKRDSL 77
+ S L +G++ I + +++E+D S R L
Sbjct: 73 IYDPSNTIYVSRGGINSMFLNSKGRVFTDCFIYAHPFANSSENDHPDYVVEVDESLRTKL 132
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------------------- 114
L +KL + V IE +N F +
Sbjct: 133 QMLLKLHKLAAKVNIEKLENVESHYYYNDTPEFDSFLEELQNNYILTKDPSQAREMAQRL 192
Query: 115 ----------------FIDERFSIADV--LLHRTWGHNEKIASDIKTYHE---------- 146
+D R + L + + +S +
Sbjct: 193 IDDQAIFGPNIPVVGFAVDNRIPNFGIKFLTKQLQNQDPFSSSFKSQFESPSVSAQDVAV 252
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
R +G+++ +I P + +D NG+SL KGCY+GQE+ R + IRKR +
Sbjct: 253 RRYTNGLLEQADVSSDVSILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKRVVP 312
Query: 207 ITGTD 211
+ +
Sbjct: 313 VQFFE 317
>gi|226364338|ref|YP_002782120.1| hypothetical protein ROP_49280 [Rhodococcus opacus B4]
gi|226242827|dbj|BAH53175.1| hypothetical protein [Rhodococcus opacus B4]
Length = 373
Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 87/282 (30%), Gaps = 49/282 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G + +L I + V LP + + L G++ +F+ + ++ T
Sbjct: 54 SHRFVIAISGPERLTWLHTISSQHVAALPDGASAENLSLDVNGRVEHHFVQTDLDGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108
++ + + L+ L S V+ +
Sbjct: 113 IDTEADRGPDLLSFLTKMVFWSKAEPRDGNELAVLNVIGPDAPSVLGAAGVAVPAAPYAA 172
Query: 109 ---------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
T + + R +A + + LR+
Sbjct: 173 VAVAGGGFVRRMPWPTADSFDLLVPREGLATWWGR--LTAAGAAPAGTWAFEALRVAAVR 230
Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 231 PRIGLD-TDDRTIPHEVRWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHL 289
Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
P G P+ +G +G V+ G ALA+ +
Sbjct: 290 DGSAEGRPEPGDPVTAGGRAVGRIGTVIDHHELGPIALALVK 331
>gi|255326797|ref|ZP_05367873.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296]
gi|255296014|gb|EET75355.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296]
Length = 411
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 51/285 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G +L +I + + + +R +L+PQG++ + + +
Sbjct: 73 SSLGVVRVEGPDRQTWLTSIASQILTGMTVGESREFLLLSPQGRVEYAPSAIE-DGEALW 131
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
L ++ + L D L K V ++ VL + + S
Sbjct: 132 LIVEGYQAQPLTDYLNRMKFMMRVEVQNLSDEYAVLESARNPILQDGSVHPALAEGKPLV 191
Query: 115 FIDERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELR 148
+ D + A +L ++ + + LR
Sbjct: 192 WEDPWHTPAPGSYRYDEAGDAHPGADYVRFLSIVPRSVLPALAESSDARFAGLWAAEALR 251
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I T+ P + + KGCY GQE V+R+ + +R + +
Sbjct: 252 IEAWRPRYGTE-ADDKTIPQELDYTRT-AVHFDKGCYKGQETVARVHNLGRPPRRLVFLD 309
Query: 209 GTDD---LPPSGSPILTDDI--EIGTLGVV-----VGKKALAIAR 243
LP +GS + + +G + V G ALA+ +
Sbjct: 310 IDGSEHTLPAAGSELFVEGKSRPVGRITSVALHYEAGPIALAVIK 354
>gi|229821893|ref|YP_002883419.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
gi|229567806|gb|ACQ81657.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
Length = 396
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/304 (17%), Positives = 99/304 (32%), Gaps = 46/304 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS+ + V G + +L + +A + L + +L P G + + +
Sbjct: 67 VDLSHLGVVTVAGVDRLTWLDTLSSAWLRDLAPGVGAELLLLDPHGHVEHAAAVV-DDGA 125
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV----------VLSWNQEHTFSNS 113
T L + L L + V + ++ V + S QE
Sbjct: 126 TTWLVTEADDAAPLAAFLDSMRFTLRVEVAVRDDVAVLGAVGDAARKIASAAQERGALLG 185
Query: 114 SFIDERFSIADVLLHRTWGHNEKIA----------------------------SDIKTYH 145
+ D ++ + + A + +
Sbjct: 186 VWRDPWPAVVAGGTRYSAESHPGEAFAGAYVLVPWETANEVVDGARQAGELRLAGAWAWE 245
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + + PH+ +D L + L KGCY GQE V+R+ + +R
Sbjct: 246 ALRVEARRPRFARE-VDERSIPHE--LDWLRTAVHLDKGCYRGQETVARVFNMGRPPRRL 302
Query: 205 MIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
+++ LP G+ +L + +GTL VV L + V ++ L V G
Sbjct: 303 VLLHLDGSEDVLPEPGTEVLAEGRPVGTLTSVVRHHELGPIGLAVVKRSLPLETELVVGG 362
Query: 262 VRVK 265
V
Sbjct: 363 VAAS 366
>gi|84999054|ref|XP_954248.1| long-chain-fatty-acid--coa ligase 5 [Theileria annulata]
gi|65305246|emb|CAI73571.1| long-chain-fatty-acid--coa ligase 5, putative [Theileria annulata]
Length = 1034
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L+N+ K+CG+ + FLQ +I++D+ + + R + L+ QG I+ LI E D
Sbjct: 692 RLNNRVVTKLCGQDSFNFLQGLISSDLRLVRAQETRPALFLSSQGHIVAESLIFTHEGD- 750
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP--------INGVVLSWNQEHTFSNSSFI 116
F L+ + +++ + KL S V + + + E T N FI
Sbjct: 751 FYLDSLKVNHSKILNIINKRKLASKVYTKTTESEVYVNTSESDFYSHFQTEKTKENKDFI 810
Query: 117 DERFSIADVLLHRTW-----------------GHNEKIASDIKTYH-ELRINHGIVD--- 155
+ HR + + EK ++ Y L +N+ ++D
Sbjct: 811 KLLDTRNQFFGHRYYCISNNIVDGVDFNTLGKDNFEKNQENLSVYDIMLLMNNYVMDVMM 870
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
F+ + P D + N +S KGCY+GQE+++RI ++ +I K + I +DD
Sbjct: 871 SKPGFVEYKLMPFDLNLQNFNYLSANKGCYVGQEIINRINNKVLINKYKLYIALSDD 927
>gi|146412820|ref|XP_001482381.1| hypothetical protein PGUG_05401 [Meyerozyma guilliermondii ATCC
6260]
Length = 436
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 89/308 (28%), Gaps = 109/308 (35%)
Query: 10 SFIKVCGKSAIPFLQAIITA----DVLTLPY----------------------------- 36
+ I++ G A F+ ++T D++
Sbjct: 13 ALIRIHGPDATKFVNGLVTTRLLPDIVKKKQHTISENENSHQELSQIIDVHRNWGLMHED 72
Query: 37 -----------KIARGSAILTPQGKILLYFLISKI--------EEDTFILEIDRSKRDSL 77
+ S L +G++ I + +++E+D S R L
Sbjct: 73 IYDPSNTIYVLRGGINSMFLNSKGRVFTDCFIYAHPFANSSENDHPDYVVEVDESLRTKL 132
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----------------------- 114
L +KL + V IE +N F +
Sbjct: 133 QMLLKLHKLAAKVNIEKLENVESHYYYNDTPEFDSFLEELQNNYILTKDPSQAREMAQRL 192
Query: 115 ----------------FIDERFSIADV---------------LLHRTWGHNEKIASDIKT 143
+D R + L + +A D+
Sbjct: 193 IDDQAIFGPNIPVVGFAVDNRIPNFGIKFLTKQLQNQDPFSSLFKSQFESPSVLAQDVAV 252
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R +G+++ +I P + +D NG+SL KGCY+GQE+ R + IRKR
Sbjct: 253 ---RRYTNGLLEQADVSSDVSILPFETNLDFTNGLSLDKGCYVGQELTIRTFNGGTIRKR 309
Query: 204 PMIITGTD 211
+ + +
Sbjct: 310 VVPVQFFE 317
>gi|257386337|ref|YP_003176110.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
gi|257168644|gb|ACV46403.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
Length = 362
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 107/306 (34%), Gaps = 57/306 (18%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ V G I F+ ++ V T S +L PQG + + E +L
Sbjct: 48 YGVVTVTGDDRIDFVDNAVSNRVPT-ADGDGVYSLLLDPQGHVETELYVYNAGE-RLLLF 105
Query: 69 IDRSKRDSLID--KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+ ++ D L++ + + +V I V + + + + + +
Sbjct: 106 VPPARADPLVEDWREKTFIQ--DVTIADATDEFAVFGVHGPKATEKIASVLNKTATPETP 163
Query: 127 LHRTWGH------------------------NEKIASDI----------------KTYHE 146
L G + +A D+ T+
Sbjct: 164 LSFVRGSMVDAGVTVVRSDGLVGEEGFEVVCSADVARDVYDTLENRGLNAAPFGYDTWDA 223
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
L + G +T+ P+ + NG+ KGC++GQEVVSR+ +R KR +
Sbjct: 224 LTLEAGTPLFDTEIEGQ--IPNVVGLA--NGVDFEKGCFVGQEVVSRVHNRGRPSKRLVG 279
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGV 262
+T +P SG+ + DD +G + V + +A+AR+D ++ V G
Sbjct: 280 LT-CGAVPESGAAVFVDDASVGAVTRAVESPTREEPIALARVDY--ELPDGTPSVRVDGG 336
Query: 263 RVKASF 268
V A
Sbjct: 337 EVDAEL 342
>gi|312138308|ref|YP_004005644.1| glycine cleavage protein t [Rhodococcus equi 103S]
gi|311887647|emb|CBH46959.1| glycine cleavage protein T [Rhodococcus equi 103S]
Length = 377
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 49/297 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G+ + +L I + V +LP + + L G++ +F+++ I+ T
Sbjct: 54 SHRFVIAISGEERLTWLHTISSQHVASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105
++ + + L+ L S V+
Sbjct: 113 IDTEAGRGADLLGFLQKMVFWSKAEPRDGNELAVLSLLGPDVAASPAFTAALGVAALPGV 172
Query: 106 -QEHTFSNSSFI----DERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHG 152
+ + F+ D+L+ R + + LR+
Sbjct: 173 YEAEPLAGGGFVRRMPWPTDDAFDLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVAAH 232
Query: 153 IVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 233 RPRIGLD-TDDRTIPHEVGWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLH 291
Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMA 256
P G + +G +G VV G ALA+ R VD A+ G
Sbjct: 292 LDGSAEGRPEVGETLTAAGRAVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGPC 348
>gi|291333966|gb|ADD93643.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C694]
Length = 99
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+N+ +++ G FLQ +++ D+ L + SA+LTPQGK + F + I +D
Sbjct: 3 TPLNNRKILELKGSDCKKFLQNLVSNDINLLDQGL-VYSALLTPQGKYIADFFVVPI-DD 60
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ 95
+++ +L+D+L YKLRS+V I+ Q
Sbjct: 61 GMRIDVHAELAKTLLDRLNIYKLRSDVEIKKQ 92
>gi|269957803|ref|YP_003327592.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894]
gi|269306484|gb|ACZ32034.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894]
Length = 379
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 42/293 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G + +L I + D+ +L + + +L+PQG + + + +
Sbjct: 45 SHLGVVRVAGPDRLRWLHDITSQDLASLTPRTSTELLVLSPQGHVEH-AAGAVDDGEATW 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS---WNQEHTFSNSSFIDERFSIA 123
L + + L L + V + + + + ++ D +A
Sbjct: 104 LVTEADQAAPLAAWLDRMRFTLRVEVADVTADWAAIGEPVAAEGAPDGPLTWWDTWPRVA 163
Query: 124 DVLLHRTWGHNEKIASD-----------------------------IKTYHELRINHGIV 154
E ++ LR+
Sbjct: 164 AGGTRYGPDTAEHPGAERPWRLVLVPRGSLEAEVAAREAAGARLAGTWATEALRVEAFRP 223
Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
P + + PH+ +D L + L KGCY GQE V+R+ + +R + +
Sbjct: 224 RPARE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRLVFLHLDGSG 280
Query: 213 --LPPSGSPIL--TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
LP G+ +L +D +GTL V L + V ++ + L V G
Sbjct: 281 HLLPEPGAEVLLPSDGRVVGTLTSVARHHELGPVGLAVVKRSVPEDAELLVAG 333
>gi|134103536|ref|YP_001109197.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharopolyspora erythraea NRRL 2338]
gi|291008361|ref|ZP_06566334.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharopolyspora erythraea NRRL 2338]
gi|133916159|emb|CAM06272.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharopolyspora erythraea NRRL 2338]
Length = 376
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 105/312 (33%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L +++ + LP A + +L G + + +++ + ++
Sbjct: 43 SHRQVIAVPGEERLSWLHLVLSQHMTELPDGRATEALVLDSHGHVDCHVMVAHHDGVVYL 102
Query: 67 LEIDRSKR------------DSLIDKLLFYKLRSNVIIEIQPINGVVLS----------- 103
++ SL++ L + S V +LS
Sbjct: 103 DTEPGAQATSALPSLGVDGRQSLLEYLEAMRFWSKVEPRDASEEFALLSVIGPDAAQLLS 162
Query: 104 --------WNQEHTFSNSSFI-----------DERFSIADVLLHRT-WGHNEKIASDIKT 143
++ F+ D AD++ T +
Sbjct: 163 KFATVPSGGDEVAGLPGGGFVRTVPFRGLFTADLVVPRADLVEWWTKLTDAGMRPAGTMA 222
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
Y LR+ + PH+ + + KGCY GQE VS++ + +R
Sbjct: 223 YDALRVEALRPRVGFE-TDDRAIPHELGWVHVAA-HVAKGCYRGQETVSKVHNVGKPPRR 280
Query: 204 PMIITGTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKG 254
+++ + P +G P+ + ++G +G VV G ALA+ R VD + G
Sbjct: 281 MVLLHLDGSVEIRPETGDPVWHGERKVGRVGTVVLHHELGPIALALLKRTAPVDAELVAG 340
Query: 255 MALTVHGVRVKA 266
V
Sbjct: 341 DPEQDRAVAAAV 352
>gi|325674774|ref|ZP_08154461.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707]
gi|325554360|gb|EGD24035.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707]
Length = 377
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 49/297 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I + G+ + +L I + V +LP + + L G++ +F+++ I+ T
Sbjct: 54 SHRFVIAISGEERLTWLHTISSQHVASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVT-W 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
++ + + L+ L S + + + GV
Sbjct: 113 IDTEAGRGADLLGFLQKMVFWSKAEPRDGNELAVLSLLGPDVAASPAFTAALGVAALPGV 172
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHELRINHG 152
+ D+L+ R + + LR+
Sbjct: 173 YEAVPLAGGGFVRRMPWPTDDAFDLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVAAH 232
Query: 153 IVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
D PH+ + L KGCY GQE V+R+ + + +++
Sbjct: 233 RPRIGLD-TDDRTIPHEVGWIGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLH 291
Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMA 256
P G + +G +G VV G ALA+ R VD A+ G
Sbjct: 292 LDGSAEGRPEVGETLTAAGRAVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGPC 348
>gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
Length = 369
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/316 (16%), Positives = 100/316 (31%), Gaps = 57/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L + T + LP +L+P G + + ++++ T
Sbjct: 57 SHRGVIAVPGEERLGWLHTLTTQHLAELPAGQGTELLVLSPHGHVEQHAMVAEDGGTT-W 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------NQEHTFSNSSFIDE-- 118
L+ + L+ L + S V + +L+ T S D
Sbjct: 116 LDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLALVGPAAVEAAATLGVSGLADPDV 175
Query: 119 ------------------------RFSIADVLLHRTWGHNEKIASD-------------- 140
+ G + +A D
Sbjct: 176 LEVPGPKFRAGSVPPRPTVRYDVRPLPVGGWARRGPLGVDLLVARDTMGQVVTDLRAAGV 235
Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ Y +R+ D P + + + + L KGCY GQE V+R+ +
Sbjct: 236 PVAGLWAYEAVRVGARRPRVGVD-TDHRTIPAEVDL-VGPAVHLEKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
+R +++ TD+ P +G+P++ + +G +G V L + V +
Sbjct: 294 MGRPPRRLVLLHLDGVTTDEPPSAGTPVMREGRAVGFVGTAVHHHELGQIALAVVKRNVP 353
Query: 253 KGMALTVHGVRVKASF 268
L V
Sbjct: 354 DDARLLVGETAAMIDR 369
>gi|300712072|ref|YP_003737886.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
gi|299125755|gb|ADJ16094.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
Length = 358
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 110/305 (36%), Gaps = 57/305 (18%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G + ++ +++ V + + PQG+I L + E +L
Sbjct: 48 YGVLVITGDDRVEYVDNVVSNRVPD-DDGEGAYALLCDPQGRIELDIYVYNAGE-RLLLF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT------------FSNSSF 115
+ + L ++ K+ V IE+ + VL +
Sbjct: 106 VPPGRARGLAEEW-REKVFIQDVEIEVASDDLAVLGVHGPKATEKVASVLNKIGVPEGEL 164
Query: 116 IDERFSIADVLLHRTWGHNE----------------------------KIASDIKTYHEL 147
+ +R +I D+ + + I +T+ L
Sbjct: 165 VFDRGTINDIGVTVIASDDPTGEDGYEIVCSAAESEAVMDALINYGTGAIPFGSRTWETL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G +++ P ++ L N + KGC++GQEV+SR+++R +R + +
Sbjct: 225 TLEAGTPLFSSEL--EGRVP--NVLGLRNAVDFEKGCFVGQEVISRVENRGQPSQRLVGL 280
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263
+LP +G+ +L DD +G + V +L A+A ++ + +TV
Sbjct: 281 R-CSELPAAGTAVLGDDETVGEITRAVQSPSLSEPIALALVEFGLES----EDVTVGDES 335
Query: 264 VKASF 268
V A+
Sbjct: 336 VPATV 340
>gi|302788266|ref|XP_002975902.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii]
gi|300156178|gb|EFJ22807.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii]
Length = 354
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 98/307 (31%), Gaps = 51/307 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S+ ++V G + FL TAD L L + +T + + +
Sbjct: 39 IEMSHFGRLRVTGDDRLRFLHNQSTADFLPLKDGEGCDTVFVTNTARTIDLATAWAMNTA 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------SF 115
+L ++ D LI L Y S+ +E+ I ++ S++ S
Sbjct: 99 VILLVSPETRHD-LIKLLNKYIFFSD-KVEVDDITEKTSYFSIVGPQSDNVMRQLKLESL 156
Query: 116 IDERF-------------------------------SIADVLLHRTWGHNEKIASDIKTY 144
ID+ + + A + + + +
Sbjct: 157 IDKPYGTHVHYTANGAPVTVGVGSGLCTKGYSFLVSTAAAGPVWTSILKCGALPMGSSAW 216
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G P + +A + IS TKGCYIGQE V+R+ N +++
Sbjct: 217 ERLRILQGRPVPGKELT-DEFNVLEAGLWRT--ISQTKGCYIGQETVARLITYNGVKQHL 273
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK---ALAIARIDKVDHAIKKGMALTVHG 261
+ T + P D ++ G L + L R G+ + +
Sbjct: 274 HGVKLTGAVEPGTILTTRDGVKAGKLTSCTREAPYFGLCYIR----KQCGGPGLEIKIGD 329
Query: 262 VRVKASF 268
V
Sbjct: 330 GSVTGIL 336
>gi|296107164|ref|YP_003618864.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy]
gi|295649065|gb|ADG24912.1| aminomethyltransferase [Legionella pneumophila 2300/99 Alcoy]
Length = 329
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 36 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDTSMIQGAQCNLKGRILSLLDIINWQG--V 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + + L L S V I I G L + E +++
Sbjct: 94 KLVLPQDLIEVTQNSLNKVALLSRVKITSNHNYKILGFYLQHGNDQIPQLLPLSSELYAL 153
Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ D L +N+ + S T+H LR+ + +D
Sbjct: 154 SCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 211
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216
+ PH + +S KGCY GQE+++R +R ++ +I + L S
Sbjct: 212 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 269
Query: 217 GSPIL--TDDIEIGTL 230
G + +D E+G L
Sbjct: 270 GQKLFKSDEDTEVGEL 285
>gi|54297492|ref|YP_123861.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris]
gi|53751277|emb|CAH12688.1| hypothetical protein lpp1537 [Legionella pneumophila str. Paris]
Length = 352
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDTSMIQGAQCNLKGRILSLLDIINWQG--V 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + + L L S V I I G L + E +++
Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNHNYKILGFYLQHGNDQIPQLLPLSSELYAL 176
Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ D L +N+ + S T+H LR+ + +D
Sbjct: 177 SCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 234
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216
+ PH + +S KGCY GQE+++R +R ++ +I + L S
Sbjct: 235 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 292
Query: 217 GSPIL--TDDIEIGTL 230
G + +D E+G L
Sbjct: 293 GQKLFKSDEDTEVGEL 308
>gi|54294377|ref|YP_126792.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens]
gi|53754209|emb|CAH15686.1| hypothetical protein lpl1446 [Legionella pneumophila str. Lens]
Length = 352
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 35/255 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + + L L S V I I G L + + E +++
Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176
Query: 123 ADVL-----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ L + + N ++ + T+H LR+ + +D +
Sbjct: 177 SCTTHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYPN 235
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSG 217
PH + +S KGCY GQE+++R +R ++ +I + L SG
Sbjct: 236 -SRGLFLPHRIGLHQTTYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-SG 293
Query: 218 SPILTDDI--EIGTL 230
+ D E+G L
Sbjct: 294 QKLFKSDENTEVGEL 308
>gi|307610278|emb|CBW99842.1| hypothetical protein LPW_16031 [Legionella pneumophila 130b]
Length = 352
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 35/255 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + + L L S V I I G L + + E +++
Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176
Query: 123 ADVL-----------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ L + + N ++ + T+H LR+ + +D +
Sbjct: 177 SCTTHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYPN 235
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPSG 217
PH + +S KGCY GQE+++R +R ++ +I + L SG
Sbjct: 236 -SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-SG 293
Query: 218 SPILTDDI--EIGTL 230
+ D E+G L
Sbjct: 294 QKLFKADENTEVGEL 308
>gi|52841809|ref|YP_095608.1| glycine cleavage T protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628920|gb|AAU27661.1| glycine cleavage T protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 352
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I + G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 59 LSYLGVIDLFGEKSIDFLQGQLTCDLRLVSDVSMVQGAQCNLKGRILSLLDIINWQG--V 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
L + + + + L L S V I I G L + + E +++
Sbjct: 117 KLVLPQDLIEVTQNSLNKVALLSRVKITSNNNYKILGFYLQHDNDQIPQLLPLPSELYAL 176
Query: 123 A------------------------DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ D L +N+ + S T+H LR+ + +D
Sbjct: 177 SCTAHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGS--LTWHTLRLFNNQIDIYP 234
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216
+ PH + +S KGCY GQE+++R +R ++ +I + L S
Sbjct: 235 N-SRGLFLPHRIGLHQTTYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 292
Query: 217 GSPILTDDI--EIGTL 230
G + D E+G L
Sbjct: 293 GQKLFKSDENTEVGEL 308
>gi|28493623|ref|NP_787784.1| hypothetical protein TWT656 [Tropheryma whipplei str. Twist]
gi|28476665|gb|AAO44753.1| unknown [Tropheryma whipplei str. Twist]
Length = 344
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 20/274 (7%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S V L +++ G+ L AI T D I+ + L QG+++ + +
Sbjct: 45 SVVPLDPARVLRLFGEDRFKILHAISTQDYT--QPMISTETLFLNSQGRVINRACVVAAQ 102
Query: 62 EDTFILEIDRSKRDS-LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E L D K L + LL + IE + + + D
Sbjct: 103 E-CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERL-AEWQDPWP 160
Query: 121 SIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIV---DPNTDFLPSTIF 166
+I E+ IK + + G++ P+ +
Sbjct: 161 NICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSL 220
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
PH+ L + LTKGCY GQE+V+++ + +R + + LP + IL D
Sbjct: 221 PHELGW-LRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGKR 279
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+G + V L + V ++ +G L V
Sbjct: 280 VGRVTSVANHWELGPIALGVVKRSVPEGKVLLVD 313
>gi|298345557|ref|YP_003718244.1| glycine cleavage T protein [Mobiluncus curtisii ATCC 43063]
gi|304391113|ref|ZP_07373065.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|298235618|gb|ADI66750.1| glycine cleavage T protein (aminomethyl transferase) [Mobiluncus
curtisii ATCC 43063]
gi|304325996|gb|EFL93242.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 354
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 103/290 (35%), Gaps = 62/290 (21%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67
+KV G +L ++ T D +R + IL P G I L F + +IL
Sbjct: 24 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 83
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108
E R + + RS V I + V+ W+++
Sbjct: 84 EEPRGAVEFFQS----MRFRSRVEIADVSADFTVIGYLKTGDKDSLAAQFWSEQARVTWT 139
Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144
T +S D ++ L N + +D+ +
Sbjct: 140 DPWPGPVGNTTTFTIPGASHPADDPAAPHRELAVVSHPDLPALEAKAATNALMKADLGAW 199
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203
+RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R
Sbjct: 200 EAVRISLWHPRLGREGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 256
Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR 243
+ +LP GSP+ +D E+G L V G+ L + +
Sbjct: 257 LTFLDIDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLK 306
>gi|28572820|ref|NP_789600.1| hypothetical protein TW679 [Tropheryma whipplei TW08/27]
gi|28410953|emb|CAD67338.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
Length = 321
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 20/274 (7%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S V L +++ G+ L AI T D I+ + L QG+++ + +
Sbjct: 22 SVVPLDPARVLRLFGEDRFKILHAISTQDYT--QPMISTETLFLNSQGRVINRACVVAAQ 79
Query: 62 EDTFILEIDRSKRDS-LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E L D K L + LL + IE + + + D
Sbjct: 80 E-CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERL-AEWQDPWP 137
Query: 121 SIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIV---DPNTDFLPSTIF 166
+I E+ IK + + G++ P+ +
Sbjct: 138 NICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSL 197
Query: 167 PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE 226
PH+ L + LTKGCY GQE+V+++ + +R + + LP + IL D
Sbjct: 198 PHELGW-LRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLDGQLPMPDAVILCDGKR 256
Query: 227 IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+G + V L + V ++ +G L V
Sbjct: 257 VGRVTSVANHWELGPIALGVVKRSVPEGKVLLVD 290
>gi|315656014|ref|ZP_07908912.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333]
gi|315490078|gb|EFU79705.1| folate-binding protein YgfZ [Mobiluncus curtisii ATCC 51333]
Length = 368
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/304 (21%), Positives = 109/304 (35%), Gaps = 64/304 (21%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67
+KV G +L ++ T D +R + IL P G I L F + +IL
Sbjct: 38 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 97
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108
E R + + RS V I + V+ W+++
Sbjct: 98 EEPRGTVEFFQA----MRFRSRVEIADVSADFAVIGYLKTGDKDSLAAQFWSEQARVTWT 153
Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144
T +S D ++ L N + +D+ +
Sbjct: 154 DPWPGPVGNTTTFTTPGASHPADDPAAPHRELAVVSHPDLPALEAKAATNALMKADLGAW 213
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203
+RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R
Sbjct: 214 EAVRISLWHPRLGCEGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 270
Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR--IDKVDHAI 251
+ +LP GSP+ +D E+G L V G+ L + + +D + +
Sbjct: 271 LTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLKRQVDPAEMLL 330
Query: 252 KKGM 255
+G
Sbjct: 331 VEGT 334
>gi|255615044|ref|XP_002539647.1| conserved hypothetical protein [Ricinus communis]
gi|223504030|gb|EEF22736.1| conserved hypothetical protein [Ricinus communis]
Length = 279
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 40/96 (41%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++V G A FLQ +T DV A A TP+G+I FLI + +E T
Sbjct: 159 LPYWSTLQVAGPDAAKFLQGQLTCDVAQATTTQAVPGAHCTPKGRIRSSFLIGRRDEQTH 218
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV 101
L + + L Y + S I Q V+
Sbjct: 219 WLRVRSDLLTTASAALGKYIVFSKAAIAAQEQLAVL 254
>gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
Length = 369
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 98/312 (31%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G+ + +L + T + LP +L+P G + + ++++ E T
Sbjct: 57 SHRGVIAVPGEDRLGWLHTLTTQHLADLPDGQGTELLVLSPHGHVEQHAMVAE-EGGTTW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
L+ + L+ L + S V + +LS +
Sbjct: 116 LDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLSLVGPAAVDAVATLGVSDLAEPDL 175
Query: 115 --FIDERFSIADVLLHRT------------WGHNEKIASDI------------------- 141
+F V T W + D+
Sbjct: 176 LEVPGPKFRAGSVPPRPTVRYDVRALPIGGWARRGPLGVDLLVAREGMGRVVAELRGADV 235
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y +R+ D P + + + + L KGCY GQE V+R+ +
Sbjct: 236 PVVGLWAYEAVRVAARRPRVGLD-TDHRSIPAEVDL-VGPAVHLEKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
+R +++ TD P +G+P+ D +G +G V L + V +
Sbjct: 294 MGRPPRRLVLLHLDGVTTDQPPSAGTPVTRDGRTVGFVGTAVHHHELGQVALAVVKRNVP 353
Query: 253 KGMALTVHGVRV 264
L V
Sbjct: 354 DDARLLVGETAA 365
>gi|159899967|ref|YP_001546214.1| glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC
23779]
gi|159893006|gb|ABX06086.1| Glycine cleavage T-protein barrel [Herpetosiphon aurantiacus ATCC
23779]
Length = 327
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/305 (19%), Positives = 106/305 (34%), Gaps = 46/305 (15%)
Query: 3 SVYL--SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+VYL S+ I++ G+ + + + T VL L + + + T G+I+ + I
Sbjct: 13 AVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRIIDLITVFAI 72
Query: 61 EEDTFILEIDRSKRDSLIDKL---LFY----KLR-------------SNVI-----IEIQ 95
++DT + ++ L FY K+R S + Q
Sbjct: 73 DDDTIWVITSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQATAMLERLTSQ 132
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIK 142
+ V L + R + D
Sbjct: 133 SLEHVGLWQHLSAEIDGCPVRLARIRPMRGAGWAIFADLAAADALCEAFDDANAALLDRP 192
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
TYH LR+ G N L P +A + + +S KGCYIGQE+++R+ R + K
Sbjct: 193 TYHTLRVEAGYPALNE--LNEEFIPLEANL--WDAVSFNKGCYIGQEIIARMDSRGRLAK 248
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKGMALTVHG 261
+ + + + + + + + GTL VV AL + V + G LT+
Sbjct: 249 KLQGLGLSGAVEVPAT-LTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELGSELTIGE 307
Query: 262 VRVKA 266
+
Sbjct: 308 QQATV 312
>gi|299115744|emb|CBN74309.1| folate-binding protein YgfZ [Ectocarpus siliculosus]
Length = 544
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/342 (18%), Positives = 113/342 (33%), Gaps = 86/342 (25%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF----------- 55
S+ I+V G+ + FL + T + G+++ F
Sbjct: 147 SHWGVIRVEGEDRLRFLHSQGTNAFERATVGQVVATCFTNNIGRVV-DFCEGVVLDDAVW 205
Query: 56 LISKIEE--------DTFILEIDRSKRDSLIDKLLFYKL--------------------- 86
LIS D FI +D++ SL ++L + L
Sbjct: 206 LISSPHRWQKLLGTMDKFIFPMDKTTVSSLSEELAVFSLAGPKAAETMAMAKCASCPEPG 265
Query: 87 RS--------NVII---------EIQPINGV------VLSWNQEHTFSNSSF---IDERF 120
RS V+I + GV VLS + E + +
Sbjct: 266 RSVEWEFEGEKVLIIGHARPLTRTREEEEGVSHDAEGVLSGDGERQGTQQHPYYSVIVPV 325
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
S++ + +A+ + + LRI G P + + P +A + + +
Sbjct: 326 SVSSKVWSALSASPSVVAAGEEEWQTLRIKQGFPFPGKELT-ADYNPLEAGL--WHAVHF 382
Query: 181 TKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPILTD--DIEIGTLGVVVGKK 237
KGCYIGQE +SR+ N + K ++ D P G+ + G + ++ +
Sbjct: 383 DKGCYIGQESISRVNAYNAVSKALYGVSFEDSTSPEQGTELFVQETGKSAGVVTSMLDRD 442
Query: 238 ------ALAIARIDK----VDHAIKKGMALTVHGVRVKASFP 269
LA R + + K+G L G V+ +P
Sbjct: 443 ATSHPFGLAYIRTKAGGVGLKLSTKEGEPL---GTVVQVPYP 481
>gi|294891144|ref|XP_002773442.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239878595|gb|EER05258.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 165
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
S Y LRI + + + P + P + +DL N I+ KGCYIGQE+ +R
Sbjct: 3 SDAESTEALYRRLRIGLVVPEGPNEMAPDKVLPLNYNLDLTNHIAFNKGCYIGQELTTRA 62
Query: 195 QHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIK 252
+ +RKR + D+ SG+ I+ D +IG + + + + I ++
Sbjct: 63 SKKLAVRKRLFGMRIDGDVDVESGAEIMCDGEKIGKVLELSSSEGDGDVLGIAQIHAP-- 120
Query: 253 KGMALTVHGVRVKASF 268
KGM + V+A+
Sbjct: 121 KGMQMNTKQAMVEATK 136
>gi|227494479|ref|ZP_03924795.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces
coleocanis DSM 15436]
gi|226832213|gb|EEH64596.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces
coleocanis DSM 15436]
Length = 385
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/314 (17%), Positives = 105/314 (33%), Gaps = 65/314 (20%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ ++ ++V G +L + + + + +R +L PQG+I + E
Sbjct: 38 ALCEFNDLGLVRVAGPDCFSWLTTLSSQILTGMTAGESREMLLLDPQGRIQFACGVVAGE 97
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------IQPI 97
+ ++L ++ K +L+D L + V + + +
Sbjct: 98 GEVYLL-LEGGKVPALVDFLTKMQFMLRVEVTDVSADFAVFATIVPQGKFSTVINNLATL 156
Query: 98 NGVVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTWGHNEK------------- 136
GV W T++ F V + + G E
Sbjct: 157 PGVFGQWEDPWPGVVEGGTTYTPVGFKHPALERKRVFVLVSAGEAESFTHAWVSSVFSAG 216
Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSR 193
+ + LRI D + + PH+ +D L + L KGCY GQE V+R
Sbjct: 217 DCPWAGRNAWEALRIEDMRPDYLHE-VDDKSLPHE--LDWLRTAVHLNKGCYCGQEAVAR 273
Query: 194 IQHRNIIRKRPMIITGTDDLP---PSGSPILTDDIEIGTLGVVV-----GKKALAIARID 245
I + +R +++ G+P+L +G + + G ALA+ R
Sbjct: 274 IVNLGKPPRRLVVLQLDGSNSVQIKVGAPVLAGKRSVGAVTSIARHADLGPVALAVVR-- 331
Query: 246 KVDHAIKKGMALTV 259
+ LTV
Sbjct: 332 ---RGLALEAPLTV 342
>gi|315503573|ref|YP_004082460.1| folate-binding protein ygfz [Micromonospora sp. L5]
gi|315410192|gb|ADU08309.1| folate-binding protein YgfZ [Micromonospora sp. L5]
Length = 369
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 62/303 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G+ I +L + + + L +L+P G + + +++ + +T
Sbjct: 57 SHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQHAMVA-DDGETTW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
L+ + + L+ L + S V + +LS
Sbjct: 116 LDTEPGMTEGLLSYLEKMRFFSKVDPRDATADHALLSLVGPEAPGALDTLGVTGLAAPDV 175
Query: 113 SSFIDERFSIA----------------------------DVLLHRTWGH--------NEK 136
++ +F D+L+ R
Sbjct: 176 AAVPGPKFRSGELPARPSAVYDVKPLPVGGWARRVALGVDLLVPRAAMDEVVAELRGAGV 235
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ + Y +R+ D P + + + + L KGCY GQE V+R+ +
Sbjct: 236 PVAGLWAYEAIRVAAKQARAGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV 247
+R +++ +D P +G+P+ D +G +G V G+ ALA+ + +
Sbjct: 294 LGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTAVQHYELGQVALAVLKRNTP 353
Query: 248 DHA 250
D A
Sbjct: 354 DDA 356
>gi|296130918|ref|YP_003638168.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109]
gi|296022733|gb|ADG75969.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109]
Length = 399
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/328 (16%), Positives = 113/328 (34%), Gaps = 68/328 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + +L ++ + DV LP + + +L P G + + T++
Sbjct: 59 SHLGVVTVTGPDRLSWLHSLTSQDVAALPPRTSTELLVLDPHGHVEHVAGMVDDGTTTWL 118
Query: 67 LEIDRSKRDSLIDKLLFYKLR---SNVI---------IEIQPINGVVLSWNQ--EHTFSN 112
+ + +D++ F LR ++V ++ + G ++W HT
Sbjct: 119 VGETAPALAAWLDRMRFM-LRVEVADVTDAWAALAEPVDAEGAEGEPVTWRDPWPHTAPG 177
Query: 113 S---SFIDERFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINHGIVDP 156
D D E++ +++ LR+
Sbjct: 178 GTRYGVEDAAHPGGDRRWRLVLVPRERLVAEVRTRQAAGWPLVGTWAAEALRVEAWRPRA 237
Query: 157 NTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD--- 212
+ + + PH+ +D L + L KGCY GQE V+R+ + +R +++
Sbjct: 238 SHE-VDDRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRLVMLHLDGSGHL 294
Query: 213 LPPSGSPI---------------LTDDIEIGTLGVVV-----GKKALAIAR--------- 243
+P G+ + + ++G + V G ALA+ +
Sbjct: 295 VPAVGAAVRLPGAAAPTAGGAEAAGEGRQVGRVTTVARHHELGPVALAVVKRNVPTDATL 354
Query: 244 -IDKVDHAIKKGMALTVHGVRVKASFPH 270
+D A+ G + V G + P
Sbjct: 355 LVDCDGGAVAAGQEVVVDGEGITPDRPA 382
>gi|315656111|ref|ZP_07909002.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315493113|gb|EFU82713.1| folate-binding protein YgfZ [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 368
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 103/290 (35%), Gaps = 62/290 (21%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67
+KV G +L ++ T D +R + IL P G I L F + +IL
Sbjct: 38 LGVLKVSGTDRWTWLNSVSTQDFSNWETASSREALILDPTGHIELSFFAVDDGTNVWILT 97
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------WNQEH----- 108
E R + + RS V I + V+ W+++
Sbjct: 98 EEPRGAVEFFQS----MRFRSRVEIVDVSADFAVIGYLKTGDKDSLAAQFWSEQARVIWT 153
Query: 109 -------------TFSNSSFI--DERFSIADVL---------LHRTWGHNEKIASDIKTY 144
T +S D ++ L N + +D+ +
Sbjct: 154 DPWPGPVGNTTTFTTPGASHPADDPAAPHRELAVVSRPDLPDLEAKAATNALMKADLGAW 213
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKR 203
+RI+ + P T PH+ +D L +SL KGCY GQE V+++ +R +R
Sbjct: 214 EAVRISLWHPRLGCEGKPGT-LPHE--LDWLRVAVSLQKGCYPGQETVAKLTNRGRPPRR 270
Query: 204 PMIITGTD---DLPPSGSPIL--TDDIEIGTLGVVV-----GKKALAIAR 243
+ +LP GSP+ +D E+G L V G+ L + +
Sbjct: 271 LTFLDLDGSREELPAIGSPLTLESDGSEVGVLTSVAYHPTDGQIGLGLLK 320
>gi|302870150|ref|YP_003838787.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
gi|302573009|gb|ADL49211.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
Length = 369
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 62/303 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G+ I +L + + + L +L+P G + + +++ + +T
Sbjct: 57 SHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQHAMVA-DDGETTW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
L+ + + L+ L + S V + +LS
Sbjct: 116 LDTEPGMTEGLLSYLEKMRFFSKVDPRDATADHALLSLVGPEAPGALDTLGVTGLAAPDV 175
Query: 113 SSFIDERFSIA----------------------------DVLLHRTWGH--------NEK 136
++ +F D+L+ R
Sbjct: 176 AAVPGPKFRSGELPARPSAVYDVKPLPVGGWARRVALGVDLLVPRAAMDEMVAELRGAGV 235
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ + Y +R+ D P + + + + L KGCY GQE V+R+ +
Sbjct: 236 PVAGLWAYEAIRVAAKQARAGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKV 247
+R +++ +D P +G+P+ D +G +G V G+ ALA+ + +
Sbjct: 294 LGKPPRRLVLLHLDGVASDQPPVAGTPVTLDGRTVGFVGTAVQHYELGQVALAVLKRNTP 353
Query: 248 DHA 250
D A
Sbjct: 354 DDA 356
>gi|260185703|ref|ZP_05763177.1| hypothetical protein MtubCP_06685 [Mycobacterium tuberculosis
CPHL_A]
gi|289446375|ref|ZP_06436119.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289419333|gb|EFD16534.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length = 368
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 93/286 (32%), Gaps = 52/286 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 39 SHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
L+ + + + L+ L S V +++ P +
Sbjct: 98 LDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWL 157
Query: 101 VLSWNQEHTFS----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + +R AD R + I Y R+
Sbjct: 158 AVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRAD--WQRRLTQAGVRPAGIWAYEAHRVA 215
Query: 151 HGIVDPNTDF---LPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
H + PH+ + L KGCY GQE V+R+ + +
Sbjct: 216 HRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRML 275
Query: 205 MIITGTDDL--PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
+++ + + P +G +L +G LG VV G ALA+ +
Sbjct: 276 VLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLK 321
>gi|149174487|ref|ZP_01853113.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces
maris DSM 8797]
gi|148846597|gb|EDL60934.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces
maris DSM 8797]
Length = 358
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 48/308 (15%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LSN+ I++ G + FL T D+ L + + Q +IL + D+
Sbjct: 49 LSNRDQIELSGTDRLKFLHNFCTNDIKGLQPNQGCEAFVTNVQSRILGHINAFH-HGDSI 107
Query: 66 ILEIDRSKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFI------- 116
++ + + + L Y + + +++ Q + LS +
Sbjct: 108 WIDTAPGQAEEITRHLERYIILEDARLLVRTQEFGSLYLSGPDATDILKQLDLEVEGLEE 167
Query: 117 ---------DERFSIADVLLHRTWG------------------HNEKIASDIKTYHELRI 149
D R ++ V G + + + + + LRI
Sbjct: 168 FHQLSVSNSDARLTVRRVDWFGQPGYLCSLQYVKIGEFWNRLIESGAVPAGQQVFDALRI 227
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D + +A IS KGCY+GQE ++RI + K I
Sbjct: 228 ESLYPIYGVDLSDAN-LAQEAS-RTAQSISFKKGCYLGQEPIARIDSLGHVNKEIRSIGL 285
Query: 210 TDD-LPPSGSPILTDD----IEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVH 260
+PP+G+ ++ E GT+ +A+ + K +A + +
Sbjct: 286 EGAWVPPAGAKVMFAGDDGPEEAGTITSAARSFGKYPVVAMTVLRKSANAPGTEVEVVAD 345
Query: 261 GVRVKASF 268
+
Sbjct: 346 DQSATGTV 353
>gi|302770324|ref|XP_002968581.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii]
gi|300164225|gb|EFJ30835.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii]
Length = 354
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 99/307 (32%), Gaps = 51/307 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S+ ++V G + FL TAD+L L + +T + + +
Sbjct: 39 IEMSHFGRLRVTGDDRLRFLHNQSTADLLQLKDGEGCDTVFVTNTARTIDLATAWAMNTA 98
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS--------SF 115
+L ++ D LI L Y S+ +E+ I ++ S++ S
Sbjct: 99 VILLVSPETRHD-LIKLLNKYIFFSD-KVEVDDITEKTSYFSIVGPQSDNVMRQLKLESL 156
Query: 116 IDERF-------------------------------SIADVLLHRTWGHNEKIASDIKTY 144
ID+ + + A + + + +
Sbjct: 157 IDKPYGTHVHYTANGAPVTVGVGSGLCTKGYSFLVSTAAAGPVWTSILKCGALHMGSLAW 216
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G P + +A + IS TKGCYIGQE V+R+ N +++
Sbjct: 217 ERLRILQGRPVPGKELT-DEFNVLEAGLWRT--ISQTKGCYIGQETVARLITYNGVKQHL 273
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK---ALAIARIDKVDHAIKKGMALTVHG 261
+ T + P D ++ G L + L R G+ + +
Sbjct: 274 HGVKLTGAVEPGTILTTRDGVKAGKLTSCTREAPYFGLCYIR----KQCGGPGLEIKIGD 329
Query: 262 VRVKASF 268
V
Sbjct: 330 GSVTGIL 336
>gi|15607951|ref|NP_215326.1| hypothetical protein Rv0811c [Mycobacterium tuberculosis H37Rv]
gi|15840223|ref|NP_335260.1| hypothetical protein MT0832 [Mycobacterium tuberculosis CDC1551]
gi|31791999|ref|NP_854492.1| hypothetical protein Mb0834c [Mycobacterium bovis AF2122/97]
gi|121636735|ref|YP_976958.1| hypothetical protein BCG_0863c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148660589|ref|YP_001282112.1| hypothetical protein MRA_0821 [Mycobacterium tuberculosis H37Ra]
gi|148822017|ref|YP_001286771.1| hypothetical protein TBFG_10826 [Mycobacterium tuberculosis F11]
gi|167967708|ref|ZP_02549985.1| hypothetical protein MtubH3_06598 [Mycobacterium tuberculosis
H37Ra]
gi|215402601|ref|ZP_03414782.1| hypothetical protein Mtub0_02683 [Mycobacterium tuberculosis
02_1987]
gi|215410380|ref|ZP_03419188.1| hypothetical protein Mtub9_03425 [Mycobacterium tuberculosis
94_M4241A]
gi|215426070|ref|ZP_03423989.1| hypothetical protein MtubT9_06653 [Mycobacterium tuberculosis T92]
gi|215429661|ref|ZP_03427580.1| hypothetical protein MtubE_02955 [Mycobacterium tuberculosis
EAS054]
gi|215444947|ref|ZP_03431699.1| hypothetical protein MtubT_03057 [Mycobacterium tuberculosis T85]
gi|218752473|ref|ZP_03531269.1| hypothetical protein MtubG1_03060 [Mycobacterium tuberculosis GM
1503]
gi|219556669|ref|ZP_03535745.1| hypothetical protein MtubT1_04915 [Mycobacterium tuberculosis T17]
gi|224989206|ref|YP_002643893.1| hypothetical protein JTY_0833 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253797758|ref|YP_003030759.1| hypothetical protein TBMG_00825 [Mycobacterium tuberculosis KZN
1435]
gi|254231123|ref|ZP_04924450.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254363749|ref|ZP_04979795.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254549782|ref|ZP_05140229.1| hypothetical protein Mtube_04851 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260199825|ref|ZP_05767316.1| hypothetical protein MtubT4_06755 [Mycobacterium tuberculosis T46]
gi|260204000|ref|ZP_05771491.1| hypothetical protein MtubK8_06790 [Mycobacterium tuberculosis K85]
gi|289442214|ref|ZP_06431958.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289553068|ref|ZP_06442278.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289568764|ref|ZP_06448991.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289573429|ref|ZP_06453656.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289744535|ref|ZP_06503913.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289749327|ref|ZP_06508705.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289752860|ref|ZP_06512238.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289756898|ref|ZP_06516276.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289760940|ref|ZP_06520318.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294996290|ref|ZP_06801981.1| hypothetical protein Mtub2_17746 [Mycobacterium tuberculosis 210]
gi|297633322|ref|ZP_06951102.1| hypothetical protein MtubK4_04326 [Mycobacterium tuberculosis KZN
4207]
gi|297730306|ref|ZP_06959424.1| hypothetical protein MtubKR_04401 [Mycobacterium tuberculosis KZN
R506]
gi|298524301|ref|ZP_07011710.1| glycine cleavage T-protein [Mycobacterium tuberculosis 94_M4241A]
gi|306774932|ref|ZP_07413269.1| hypothetical protein TMAG_03962 [Mycobacterium tuberculosis
SUMu001]
gi|306781336|ref|ZP_07419673.1| hypothetical protein TMBG_03272 [Mycobacterium tuberculosis
SUMu002]
gi|306783473|ref|ZP_07421795.1| hypothetical protein TMCG_04011 [Mycobacterium tuberculosis
SUMu003]
gi|306790333|ref|ZP_07428655.1| hypothetical protein TMDG_03366 [Mycobacterium tuberculosis
SUMu004]
gi|306794827|ref|ZP_07433129.1| hypothetical protein TMEG_02398 [Mycobacterium tuberculosis
SUMu005]
gi|306796578|ref|ZP_07434880.1| hypothetical protein TMFG_03974 [Mycobacterium tuberculosis
SUMu006]
gi|306802437|ref|ZP_07439105.1| hypothetical protein TMHG_03843 [Mycobacterium tuberculosis
SUMu008]
gi|306806645|ref|ZP_07443313.1| hypothetical protein TMGG_04014 [Mycobacterium tuberculosis
SUMu007]
gi|306966843|ref|ZP_07479504.1| hypothetical protein TMIG_04010 [Mycobacterium tuberculosis
SUMu009]
gi|306971036|ref|ZP_07483697.1| hypothetical protein TMJG_04030 [Mycobacterium tuberculosis
SUMu010]
gi|307078767|ref|ZP_07487937.1| hypothetical protein TMKG_03519 [Mycobacterium tuberculosis
SUMu011]
gi|307083328|ref|ZP_07492441.1| hypothetical protein TMLG_04051 [Mycobacterium tuberculosis
SUMu012]
gi|313657631|ref|ZP_07814511.1| hypothetical protein MtubKV_04381 [Mycobacterium tuberculosis KZN
V2475]
gi|2916869|emb|CAA17617.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|13880380|gb|AAK45074.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31617586|emb|CAD93696.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121492382|emb|CAL70849.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600182|gb|EAY59192.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|134149263|gb|EBA41308.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148504741|gb|ABQ72550.1| hypothetical protein MRA_0821 [Mycobacterium tuberculosis H37Ra]
gi|148720544|gb|ABR05169.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772319|dbj|BAH25125.1| hypothetical protein JTY_0833 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319261|gb|ACT23864.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289415133|gb|EFD12373.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289437700|gb|EFD20193.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289537860|gb|EFD42438.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289542518|gb|EFD46166.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685063|gb|EFD52551.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289689914|gb|EFD57343.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289693447|gb|EFD60876.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289708446|gb|EFD72462.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289712462|gb|EFD76474.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494095|gb|EFI29389.1| glycine cleavage T-protein [Mycobacterium tuberculosis 94_M4241A]
gi|308216525|gb|EFO75924.1| hypothetical protein TMAG_03962 [Mycobacterium tuberculosis
SUMu001]
gi|308325864|gb|EFP14715.1| hypothetical protein TMBG_03272 [Mycobacterium tuberculosis
SUMu002]
gi|308331736|gb|EFP20587.1| hypothetical protein TMCG_04011 [Mycobacterium tuberculosis
SUMu003]
gi|308333226|gb|EFP22077.1| hypothetical protein TMDG_03366 [Mycobacterium tuberculosis
SUMu004]
gi|308336880|gb|EFP25731.1| hypothetical protein TMEG_02398 [Mycobacterium tuberculosis
SUMu005]
gi|308343006|gb|EFP31857.1| hypothetical protein TMFG_03974 [Mycobacterium tuberculosis
SUMu006]
gi|308346892|gb|EFP35743.1| hypothetical protein TMGG_04014 [Mycobacterium tuberculosis
SUMu007]
gi|308350833|gb|EFP39684.1| hypothetical protein TMHG_03843 [Mycobacterium tuberculosis
SUMu008]
gi|308355468|gb|EFP44319.1| hypothetical protein TMIG_04010 [Mycobacterium tuberculosis
SUMu009]
gi|308359422|gb|EFP48273.1| hypothetical protein TMJG_04030 [Mycobacterium tuberculosis
SUMu010]
gi|308363326|gb|EFP52177.1| hypothetical protein TMKG_03519 [Mycobacterium tuberculosis
SUMu011]
gi|308366984|gb|EFP55835.1| hypothetical protein TMLG_04051 [Mycobacterium tuberculosis
SUMu012]
gi|323720771|gb|EGB29842.1| hypothetical protein TMMG_03867 [Mycobacterium tuberculosis
CDC1551A]
gi|326904969|gb|EGE51902.1| hypothetical protein TBPG_02893 [Mycobacterium tuberculosis W-148]
gi|328457537|gb|AEB02960.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 368
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 93/286 (32%), Gaps = 52/286 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 39 SHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVE-DHWIQTELGGTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
L+ + + + L+ L S V +++ P +
Sbjct: 98 LDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWL 157
Query: 101 VLSWNQEHTFS----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ + +R AD R + I Y R+
Sbjct: 158 AVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRAD--WQRRLTQAGVRPAGIWAYEAHRVA 215
Query: 151 HGIVDPNTDF---LPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
H + PH+ + L KGCY GQE V+R+ + +
Sbjct: 216 HRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRML 275
Query: 205 MIITGTDDL--PPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
+++ + + P +G +L +G LG VV G ALA+ +
Sbjct: 276 VLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLK 321
>gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923]
gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae]
gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 366
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 98/309 (31%), Gaps = 47/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 39 SHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQNLSLDSQGRVE-DHWIQTELGGTTY 97
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
L+ + + + L++ L S V ++ P
Sbjct: 98 LDTEPWRGEPLLEYLRKMVFWSEVTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDEST 157
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHG 152
+ D+L+ R + + ++ + Y R+
Sbjct: 158 AVPLTAGSFVRRIPGAPAGQIELDLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVAAL 217
Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+Q+ + +++
Sbjct: 218 RPRLGVD-TDQRTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHL 276
Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHG 261
+ +G +L + +G LG VV G ALA+ R D + + G
Sbjct: 277 DGSVERTSTGDAVLANSGAVGRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDG 336
Query: 262 VRVKASFPH 270
P
Sbjct: 337 SVAAVIDPD 345
>gi|327542384|gb|EGF28867.1| aminomethyltransferase [Rhodopirellula baltica WH47]
Length = 342
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 65/323 (20%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFL 56
+S + L S + + G A L + T DV L + + + +GK L + +
Sbjct: 5 LSLIRLPALSIVDLVGADATAILHNLTTNDVKKLTADGPQHAGLETFITNVRGKCLGHVV 64
Query: 57 ISKIEEDTFILEIDRSKR-----------DSLIDKLLFYKLRSNVI--IEIQPINGVVLS 103
+ ++ ++ ++ + Y +R + I + + ++
Sbjct: 65 VFATQDGYRMIGAPGIVATADNSGTVRQSQAIAEHADRYTIREDATPVIRDEELAAWMVI 124
Query: 104 WNQEHTFSNSSF--------------------------IDERFSIADVLLHRTWGHNEKI 137
+ ID ++ R E +
Sbjct: 125 DGDAEPVQTTPLPNMTNQDGVESYQLPWVKSGTLFLLPIDTAAEHPSLIADRLGVSAEAL 184
Query: 138 A-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
A D +H R+ G D + P +A + IS TKGCY+GQE V+R+
Sbjct: 185 AMGDENDFHAHRVAAGFPWFGIDLTDAH-LPQEADRE-TQTISFTKGCYLGQETVARLDA 242
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD-----------IEIGTLGVV------VGKKAL 239
++K+ + P G+ DD +G + V A+
Sbjct: 243 LGQVQKKLVRWKLAG--LPPGAEPAADDKLRALDAPEDAKPVGRITSVGRIDDQGEGLAM 300
Query: 240 AIARIDKVDHAIKKGMALTVHGV 262
AR + K ++ V
Sbjct: 301 GYARRSHFEAGAKLAGMISAGDV 323
>gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN]
gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae]
Length = 373
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 98/309 (31%), Gaps = 47/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+++ + + G +L +I T V LP + + L QG++ I T
Sbjct: 46 SHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQNLSLDSQGRVE-DHWIQTELGGTTY 104
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI--------------------------IEIQPINGV 100
L+ + + + L++ L S V ++ P
Sbjct: 105 LDTEPWRGEPLLEYLRKMVFWSEVTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDEST 164
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHELRINHG 152
+ D+L+ R + + ++ + Y R+
Sbjct: 165 AVPLTAGSFVRRIPGAPAGQIELDLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVAAL 224
Query: 153 IVDPNTDFLPSTIFPHDALM---DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D PH+ + L KGCY GQE V+R+Q+ + +++
Sbjct: 225 RPRLGVD-TDQRTIPHEVGWIGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHL 283
Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHG 261
+ +G +L + +G LG VV G ALA+ R D + + G
Sbjct: 284 DGSVERTSTGDAVLANSGAVGRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDG 343
Query: 262 VRVKASFPH 270
P
Sbjct: 344 SVAAVIDPD 352
>gi|116075586|ref|ZP_01472845.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916]
gi|116066901|gb|EAU72656.1| hypothetical protein RS9916_39011 [Synechococcus sp. RS9916]
Length = 280
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 96/271 (35%), Gaps = 23/271 (8%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G FL +A + P + + LT G++ LL + D +L
Sbjct: 16 LLRLTGGGTRQFLHGQTSAAIEQAPEQSLIHTCWLTATGRVRALLEVRLDGEGADVLVLC 75
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D D+++F R V +P V + + D+ A L
Sbjct: 76 GDADAVLEGFDRVIFPADRVKVN-AAEPQRRV---QRLQPAPEPLQWQDDVVWPASHPLP 131
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
W +D + + RI+HG+ + + P + + +SL KGCY+GQ
Sbjct: 132 DPWAALP--VADPEQLEQWRISHGLPLSSQEL-NGETNPLELGLADW--VSLEKGCYLGQ 186
Query: 189 EVVSRIQHRNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVGK----KAL 239
E V+++ R+ ++++ T G LP +G + G + + L
Sbjct: 187 ETVAKLVSRDGVKQKLRCWTIPQQDGNTPLPQAGDTLHVAGERAGVITSSQKTGQCLQGL 246
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+ R +DH V P
Sbjct: 247 ALVRRGCLDHPTLTWGP---QETEVNVHQPP 274
>gi|20806817|ref|NP_621988.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter tengcongensis MB4]
gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
gi|24636853|sp|Q8RCV9|GCST_THETN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|20515282|gb|AAM23592.1| Glycine cleavage system T protein (aminomethyltransferase)
[Thermoanaerobacter tengcongensis MB4]
gi|214035115|gb|EEB75828.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
Length = 374
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 100/314 (31%), Gaps = 61/314 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK A PFLQ ++T D+ L + + G ++ L+ K + ++
Sbjct: 58 SHMGEIIVKGKDAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYL 117
Query: 67 LEIDRSKRDSLIDKLL----FYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE--- 118
L ++ + + +L Y V IE + + + DE
Sbjct: 118 LVVNAANIEKDYKWMLNNAGIY----KVEIENVSDKIAELAIQGPKAEEILQKLTDEDLS 173
Query: 119 ---------------------RFSIADVLLHRTWGHN-------EKIASDIKTY------ 144
R + N EKI K Y
Sbjct: 174 QIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAG 233
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR G+ + I P +A + + KG +IG++ + + + + +
Sbjct: 234 LGARDTLRFEAGLPLYGNELG-EDITPLEAGLGFF--VKFDKGNFIGKDALLKQKEQGLK 290
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254
RK + +P G + D+ +IG + LA+ ID I
Sbjct: 291 RKLVGFEMIGNGIPRHGYEVQADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQIGNQ 348
Query: 255 MALTVHGVRVKASF 268
+ + + +KA
Sbjct: 349 IEVIIRNKPLKAVI 362
>gi|332671869|ref|YP_004454877.1| folate-binding protein YgfZ [Cellulomonas fimi ATCC 484]
gi|332340907|gb|AEE47490.1| folate-binding protein YgfZ [Cellulomonas fimi ATCC 484]
Length = 399
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/324 (17%), Positives = 104/324 (32%), Gaps = 66/324 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S ++V G + +L +I + D+ TLP + + +L+PQG + + E T++
Sbjct: 67 SQLGVVRVAGPDRLTWLHSITSQDLATLPPRTSTELLVLSPQGHVEHAAGVVDDGEATWL 126
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV--------------LSWNQEHTF-- 110
L +L L K V I ++W
Sbjct: 127 L---TETPVALAAWLDRMKFMLRVEITDATDEWAAIGEPVDAEGTPDEPVTWRDPWPATA 183
Query: 111 ---SNSSFIDERFSIADVLLHRTWGHNEKIASDI-------------KTYHELRINHGIV 154
+ D+ AD +++ ++ +R+
Sbjct: 184 PGGTRYGAPDDEHPGADRAWRLVLVPRDRLVDEVRAREAAGWPLVGTWAAEAVRVEALRP 243
Query: 155 DPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD- 212
+ + PH+ +D L + L KGCY GQE V+R+ + +R +++
Sbjct: 244 RAARE-VDHRTIPHE--LDWLRTAVHLHKGCYRGQETVARVHNLGRPPRRVVLLHLDGSG 300
Query: 213 --LPPSGSPILT---------DDIEIGTLGVVV-----GKKALAIAR----------IDK 246
LP +G+ + +G + V G ALA+ + +D
Sbjct: 301 HLLPEAGAAVHDVVGDAGSPEPGRAVGHVTTVARHHELGPVALAVVKRSVPVDAPLVVDC 360
Query: 247 VDHAIKKGMALTVHGVRVKASFPH 270
+ G V G V P
Sbjct: 361 EGGVVAAGQEEVVPGEGVSVDRPA 384
>gi|257069685|ref|YP_003155940.1| folate-binding protein YgfZ [Brachybacterium faecium DSM 4810]
gi|256560503|gb|ACU86350.1| folate-binding protein YgfZ [Brachybacterium faecium DSM 4810]
Length = 369
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 104/280 (37%), Gaps = 42/280 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V L + ++V G A ++ I T + P + A+L+PQG++ I+ED
Sbjct: 43 VDLGHFELLEVRGADARSWMTTITTQVLDGTPVGASSSLAVLSPQGRVEHLASAVVIDED 102
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-------------------- 103
+L +D R L L + + V + + + +
Sbjct: 103 ALLLIMDPGARAGLRRYLEMMRFAARVELTDRDDLRTLGALSPAAEVLPQLGLPEPVAVW 162
Query: 104 ---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA------SDIKTYHELRINHGIV 154
W Q + D + VL E++ + + ++ LRI
Sbjct: 163 SEPWPQLAPGGVAYGPDPEDPVGAVLTVLDGAALEQLPWRREHLAGMSSWEALRIADHRA 222
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDD 212
+ + PH+ + L + TKGCY GQE V+++ + +R +++ G+ D
Sbjct: 223 RGARE-VDGRSIPHELDL-LRTTVHTTKGCYRGQETVAKVLNLGQPPRRLVMLHLDGSQD 280
Query: 213 LP-PSGSPILTD---DIEIGTLGVV-----VGKKALAIAR 243
+P +G + IGT+ +G ALA+ R
Sbjct: 281 VPVAAGGEVRLGGPEGKVIGTVTSAGLHVDLGPIALAVVR 320
>gi|322370098|ref|ZP_08044660.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
gi|320550434|gb|EFW92086.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
Length = 372
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 106/318 (33%), Gaps = 69/318 (21%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ V G I ++ I++ V + + +L PQGK+ L + + +L
Sbjct: 47 YGVLVVSGDDRIEYVDNIVSNTVPS-EDGRGTYALLLDPQGKVELDMYVY-CAGEQLLLF 104
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQ-------EHTFSNSSFIDE-- 118
+ + L ++ K+ V I + VV + + +S DE
Sbjct: 105 VPPGEATPLAEEW-REKVFIQDVEISVATERFVVFGVHGPYATEKVASVLNGASTPDEQL 163
Query: 119 ---RFSIADVLLHRTWGHNEKIASDIK--------------------------------- 142
R +ADV + +
Sbjct: 164 SFIRGKMADVGVTVIRTDAPTGEEGYEVVCTTDETADEIGRERPNVELVFDALVTRGMNA 223
Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
T+ L + G ++ P ++ L N + KGCY+GQEVVSR+++
Sbjct: 224 APFGRVTWESLTLEAGTP--LFEYELRGEIP--NVLGLRNALDFEKGCYVGQEVVSRVEN 279
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250
R +R + + +P +G+ + D +G + + A+A+ D
Sbjct: 280 RGQPSRRLAGLL-PESVPEAGAAVFAGDEVVGEVTRGIESPSRGEPAAMALVNYD---VE 335
Query: 251 IKKGMALTVHGVRVKASF 268
I G+ + + G V A
Sbjct: 336 IGSGLTVRIDGEDVGAEL 353
>gi|254385545|ref|ZP_05000871.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194344416|gb|EDX25382.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 322
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 23/283 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS++ I V G + +L ++T + LP A + IL+ G I + + +
Sbjct: 43 VDLSHRGVITVTGPERLSWLHLLLTQHLTELPAGQATEALILSANGHIEHALYLV-DDGE 101
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--SNSSFIDERFS 121
T ++ +++L+ L K V + + + V++ + + E
Sbjct: 102 TVWAHVEPGTQEALLAYLESMKFFYRVEVADRTADFAVVNLPAGSIAEVAKELVVRETPY 161
Query: 122 IADVLLHR----TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
DV L R + + A+ + Y LR+ + PH+ +
Sbjct: 162 GRDVFLPRAELEAFAASHGPAAGLLAYEALRVEAHRPRLGQE-TDHRTIPHELGW-IGTA 219
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPIL-----TDDIEIGT 229
+ L KGCY GQE V+R+ + +R + + LP G+P+ + ++G
Sbjct: 220 VHLQKGCYRGQETVARVHNLGKPPRRLVFLHLDGSEVLLPAHGTPLRLAADGEEGRQLGF 279
Query: 230 LGVVV-----GKKALAIA-RIDKVDHAIKKGMALTVHGVRVKA 266
+ V G ALA+ R VD + G V V
Sbjct: 280 VTTAVRHHELGPIALALVKRNVPVDAPLLAGKTAAAQEVVVAP 322
>gi|297563263|ref|YP_003682237.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847711|gb|ADH69731.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 340
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 92/281 (32%), Gaps = 31/281 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ ++V G + +L + + L A + +L +G + + + E T
Sbjct: 45 SNRGVVRVTGPDRLGWLNDLTSQLTRGLAPGTATEALVLDTKGHLRHHLSLVDDGEAT-W 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+ + L L + V +E + VLS + + E S+ DV
Sbjct: 104 IHTEPGDGPELAGFLDSMRFMLRVEVEDLSGSHAVLSVLG----PDRAKAVEAASLGDVT 159
Query: 127 LHRTWGHNEKIASDI-------------------KTYHELRINHGIVDPNTDFLPSTIFP 167
G + Y RI V D P
Sbjct: 160 ARAVEGETDLFVPAERLVGAAEALTAAGARPAGMWAYEANRIAEHRVRAGLD-TDDRTIP 218
Query: 168 HDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTD 223
H+ D + + L KGCY GQE V+R+ + +R +++ LP G+ I D
Sbjct: 219 HEV--DWVGRAVHLEKGCYPGQETVARVHNLGRPPRRLVMLHLDGTAERLPQVGAAIELD 276
Query: 224 DIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+G +G L + V + L V G+
Sbjct: 277 GRSVGRVGTSARHHELGPIALGVVKRSAPTDADLVVDGIAA 317
>gi|224008166|ref|XP_002293042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971168|gb|EED89503.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 591
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/340 (16%), Positives = 98/340 (28%), Gaps = 144/340 (42%)
Query: 7 SNQSFIKVCG-KS-AIPFLQAIIT------------------ADVLTLP----------- 35
+ + + V G A +LQ ++T + LP
Sbjct: 17 TTRRILSVTGTSDHATTYLQGLVTSDLFSEPRAPREEAEDSLNALSGLPLHGAEGAVEAG 76
Query: 36 -----------------------YKIARGSAILTPQGKILLYFLISKIEEDT-------- 64
R + L +G+IL L+ K D+
Sbjct: 77 VAAAHAGGSGGSVPVEEEVPVRFTSKMRSTCFLDHRGRILTDALLWKRTIDSNGSTINDN 136
Query: 65 -------------------FILEIDRSKRDSLIDKLLFYKLR-SNVIIEIQP----INGV 100
+++++ S D L L +KLR S + +E + ++ V
Sbjct: 137 TTTSSDTTATTANAKTTTEYLIDVPSSTADLLFAHLKQHKLRRSKIKLEDKSEQLSVHAV 196
Query: 101 VLSWNQEHTFSNS-SFIDERFSIADVLLHRTWGHNEKIASDIKT---------------- 143
+ N E + +D R + + +E IA D
Sbjct: 197 YGTLNAEGAPKGYLAAMDPRHPSLGMRV--LSVGDEVIAQDDDDLGTTTSAGDVSDENDD 254
Query: 144 ------------------------------------YHELRINHGIVDPNTDFLPSTIFP 167
Y LR GI + + + T
Sbjct: 255 TTNNTTTSTPTVSERTKRTTHFTKLMNNFFPHHPGTYSVLRRLSGIAEGS-ELTTRTAL- 312
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ + LN IS TKGCY+GQE+ +R Q ++RKR + +
Sbjct: 313 -ECNQEFLNAISFTKGCYLGQELTARSQFVGVVRKRIVPV 351
>gi|318042765|ref|ZP_07974721.1| aminomethyltransferase GcvT-like protein [Synechococcus sp. CB0101]
Length = 300
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 97/282 (34%), Gaps = 33/282 (11%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILEI 69
I++ G A FL + + P + +++P G++ L + D +L+
Sbjct: 16 IRLEGADARRFLHGQSSQAIELAPSGACLPTCLISPTGRMRALALVRLDDTGADLLVLDG 75
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
D + +D++LF R V + +V + ++ +
Sbjct: 76 DGAAVHQALDRVLFPADR--VKLGAFEPATLVRWIGDAASEPGPQLLNPGVDLGAGAEQP 133
Query: 130 TWGHNEKIASDIK----------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
W A + R+ G ++ T P + + +S
Sbjct: 134 AWLQQPGEALPAWLEALPELSAEATEQQRLRQGFPAAPSEL-NDTTNPFELGLAPW--VS 190
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD------LPPSGSPILTD-DIEIGTLGV 232
L KGCY+GQE ++++ + ++++ +D G+ + T+ G +
Sbjct: 191 LNKGCYVGQETLAKLATYDGVKQQLRHWRCSDAGSAAVSACAPGTSLTTEAGERAGVITS 250
Query: 233 VV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ G + LA+ R ++ L + ++ S P
Sbjct: 251 ALAGPDGLEGLALVRRGALEEP-----QLLAGEMPLEISVPA 287
>gi|184200222|ref|YP_001854429.1| hypothetical protein KRH_05760 [Kocuria rhizophila DC2201]
gi|183580452|dbj|BAG28923.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 410
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 76/323 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + + V G + +L + + + L + L+ QG+I + + T
Sbjct: 52 SQRGVVTVTGPDRLSWLTTLSSQVLTGLEPGRGTETLFLSVQGRIEFAPHVL-DDGTTTW 110
Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLS--------------WNQEHTF 110
L + + L D L + LR V ++ P V+ +
Sbjct: 111 LVTEADEAPGLADWLTSMRFALRVEVQ-DVSPQWAVLGATRDLGGRMAELLSAGPATEVS 169
Query: 111 SNSSFIDERFSIADVLLHR-------------------------------TWGHNEKIAS 139
+ + + + A VL+ R G ++ +
Sbjct: 170 PHDAAGEPSVTSAHVLVWRDPWPDVAEGGHGYTTTPEHPGRSRAWFEHLVPLGALPEVVA 229
Query: 140 DI----------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQ 188
+ LRI + PH+ +D + + L+KGCY GQ
Sbjct: 230 GLEREGIGLAGSWAAEALRIEAWRPRWGAE-TDEKTIPHE--LDWMRTAVHLSKGCYKGQ 286
Query: 189 EVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVV-----VGKKALA 240
E V+R+ + +R + LP +G+ + +G + G ALA
Sbjct: 287 ETVARVHNLGHPPRRLTFLDLDGSQHTLPEAGATVEAGGRVVGRVTAAQLHHEAGPIALA 346
Query: 241 IARIDKVDHAIKKGMALTVHGVR 263
+ + ++ LTV
Sbjct: 347 VLK-----RSVDPEAVLTVRDTP 364
>gi|38048683|gb|AAR10244.1| similar to Drosophila melanogaster CG8043 [Drosophila yakuba]
Length = 170
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTL---PYKIARGSAILTPQGKILLYFLIS 58
+ L N+ I+V G +PFLQ + T DV + + + L G++L ++
Sbjct: 39 TLEPLGNRELIRVHGAEVVPFLQGLSTNDVARIRSPGGPASMYAHFLNKAGRLLYDTILY 98
Query: 59 KI-EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW 104
+ +T ++E DR L Y++R IE+ ++ +W
Sbjct: 99 RTNNPETILIECDREASSDFRRHLRTYRVRRR--IEVDSVDDEYTTW 143
>gi|295394451|ref|ZP_06804674.1| folate-binding protein YgfZ [Brevibacterium mcbrellneri ATCC 49030]
gi|294972630|gb|EFG48482.1| folate-binding protein YgfZ [Brevibacterium mcbrellneri ATCC 49030]
Length = 344
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 59/295 (20%), Positives = 103/295 (34%), Gaps = 37/295 (12%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS+ S + + G ++ +L ++ T + + + +L+P G I + + + +D
Sbjct: 34 ADLSSMSILTLTGPDSLTWLNSLTTQKLDVAQPGTSTETLVLSPTGHIEHWAYVY-VADD 92
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------- 108
L ID + L + L K V I V+ N E
Sbjct: 93 CVWLLIDGDGKP-LQEFLESMKFMMRVDIRDVSDEYTVVGSNGEVENLEPVIQWIDPWPN 151
Query: 109 -TFSNSSFI---DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
T +S++ D S D L+ + LRI D T
Sbjct: 152 ITPGGTSYVAVKDHPGSAFDFRLNVCRDREGLNIVGRDAWEALRIEAWRP-AVADCDHKT 210
Query: 165 IFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD---DLPPSGSPI 220
+ +D+L G+ L KGCY GQE V+R+ + + +R + + + G PI
Sbjct: 211 LV---GEIDVLRTGVHLAKGCYRGQEAVARVHNLGQVPRRLVFLHLDGSEHAVVSPGDPI 267
Query: 221 L----TDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV----HGVRVKAS 267
L + ++G + L + V + L V RV A+
Sbjct: 268 LGPARGAERQVGAVTSAAIHYELGPIALGLVKRTVDPEAELAVLSDDGNTRVSAT 322
>gi|148238616|ref|YP_001224003.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT)
[Synechococcus sp. WH 7803]
gi|147847155|emb|CAK22706.1| Predicted aminomethyltransferase related to glycine cleavage
T-protein (GcvT) [Synechococcus sp. WH 7803]
Length = 290
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 96/273 (35%), Gaps = 23/273 (8%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTF 65
+ + +++ G FL +A V P + L G++ LL + D
Sbjct: 16 HFAVVRLEGSGCAGFLNGQTSAKVEGAPSGPIIQACWLNATGRLQALLELRLDDQGADVL 75
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L D + +D+++F R V + + + + + + + D
Sbjct: 76 VLNGDADQLAQGLDRVIFPADR--VRLGAPRQQRRLQHLSSDQAPGVETVL---WLDDDA 130
Query: 126 LLHRTWGHNEK-IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
++ W + A+D++ + R+ G + P + + ++L KGC
Sbjct: 131 IVPAPWNQTQACTAADLERW---RLQQGWPLGAEEIT-GDTNPFELGLAGW--VNLDKGC 184
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVG------ 235
Y+GQE ++++ R ++++ D G ++ + G + V
Sbjct: 185 YLGQETLAKLGSRGAVKQQLRCWQCADPGAADLQPGDALVLNGERAGRITSVADPNGTEP 244
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ LA+ R ++ + + +
Sbjct: 245 RLGLALIRRQALEATTLQSEPTDSRPHPLTVTV 277
>gi|292654574|ref|YP_003534471.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
gi|291372801|gb|ADE05028.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
Length = 365
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/308 (18%), Positives = 109/308 (35%), Gaps = 60/308 (19%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ V G+ + ++ +T D + + +L P G+I + E ++
Sbjct: 48 YGVVVVEGEDRVDYVDNAVT-DTVPDEDGEGVYALLLDPDGRIETEMYVYNAGE-RLLIF 105
Query: 69 IDRSKRDSLIDK------LLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFI 116
R + + L+++ L K+R + GV + T S +
Sbjct: 106 TPRDRAEPLVEEWGSKTFLQRVKIR-----DASDEFGVFGVHGPQSTEKVASILSGAGAP 160
Query: 117 DERFSIA----------------------------------DVLLHRTWGHNEKIASDIK 142
+ S DVL + N + +
Sbjct: 161 EPELSFVRGSIGGELGVTVVASDNPTGEEGYDVICRAKDAEDVLDALLFYGNPSVPVGYR 220
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T+ L G ++ + P+ A + N + KGC++GQE+VS+I++R +
Sbjct: 221 TWDSLTAEAGTPLFESELRGN--VPNVAG--VRNALDFDKGCFVGQELVSKIENRGRPSR 276
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIK-KGMALTVH 260
R + D LP SG+ + D +GT+ V L A VD+ + + + V
Sbjct: 277 RLVGFRA-DALPDSGAEVSADGESVGTVTRAVESPMLDAPIGFALVDYGLDTDALKVAVD 335
Query: 261 GVRVKASF 268
G RV+A+
Sbjct: 336 GDRVEATR 343
>gi|110668998|ref|YP_658809.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109626745|emb|CAJ53212.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
Length = 373
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 100/281 (35%), Gaps = 51/281 (18%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL- 67
I V G I F+ ++ V T+ + +L P G+I + + L
Sbjct: 48 YGVITVEGDDRIEFVDDTLSNQVPTVD-GQGVYALLLDPNGRIKTDIYVYNADNRLLCLT 106
Query: 68 --EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---NSSFIDE---- 118
++ + D++ +R NV E + GV + E S + +
Sbjct: 107 PPDVAADLAEQWADRVFIKDVRVNVASEEFAVFGVHGPQSTEKVASVLNGAGAPEPSLTF 166
Query: 119 -RFSIADVLLHRTWGHNEK--------IASDIKT--------------------YHELRI 149
R S+ D + G N ++D+ ++ L +
Sbjct: 167 VRGSMGDEGVTVIAGDNPLGEESYQVVCSADVADRILETLLTYGLNGVPFGYQVWNTLAV 226
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G NT+ P ++ + N + KGCYIGQE+VS++++R KR + +
Sbjct: 227 EAGTPRFNTELADQ--IP--NVLGIRNALDFEKGCYIGQEIVSKVENRGQPSKRLVGLRL 282
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARI 244
+ + S + D +GT+ VV ALA+
Sbjct: 283 -NQMAEVDSTVTADGDAVGTITSVVESPSIETPIALALINF 322
>gi|148359116|ref|YP_001250323.1| aminomethyltransferase-like glycine cleavage T protein [Legionella
pneumophila str. Corby]
gi|148280889|gb|ABQ54977.1| aminomethyltransferase-like glycine cleavage T protein [Legionella
pneumophila str. Corby]
Length = 329
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 37/256 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I G+ +I FLQ +T D+ + A +G+IL I +
Sbjct: 36 LSYLGVIDFLGEKSIDFLQGQLTCDLRLVSDVSMIQGAQCNLKGRILSLLDIINWQG--V 93
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + + L L S V I N +L + +H+ + S
Sbjct: 94 KLVLPQDLIEVTQHSLNKVALLSRVKI-TSNNNYKILGFYLQHSNDQIPQLLPLSSELYA 152
Query: 126 L---------------------------LHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
L L + + N ++ + T+H LR+ + +D
Sbjct: 153 LSCTSHGCVYHLGKGFYIYLIHSDYYDSLCKPFIENNQLLGSL-TWHTLRLFNNQIDIYP 211
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIITGTDDLPPS 216
+ PH + +S KGCY GQE+++R +R ++ +I + L S
Sbjct: 212 N-SRGLFLPHRIGLHQTAYVSFDKGCYKGQEIIARTHYRATLKHELKKFVIQSDNQLY-S 269
Query: 217 GSPIL--TDDIEIGTL 230
G + +DIE+G L
Sbjct: 270 GQKLFKSDEDIEVGEL 285
>gi|213026049|ref|ZP_03340496.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 200
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------- 101
+ + + +E RS R++ + +L Y + S V+I ++
Sbjct: 1 MRLFRERDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALAN 59
Query: 102 -----------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTY 144
+ + T ERF + A++L + G E ++ + +
Sbjct: 60 VFSELPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQW 117
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
L I GI + P + L GIS KGCY GQE+V+R + R ++
Sbjct: 118 LALDIEAGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAL 176
Query: 205 MIITGTDD-LPPSGSPI 220
++ G +P +G +
Sbjct: 177 WLLAGKASRVPEAGEDL 193
>gi|32470742|ref|NP_863735.1| aminomethyltransferase [Rhodopirellula baltica SH 1]
gi|32442887|emb|CAD71406.1| conserved hypothetical protein-putative aminomethyltransferase
[Rhodopirellula baltica SH 1]
Length = 342
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 102/323 (31%), Gaps = 65/323 (20%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI----LTPQGKILLYFL 56
+S + L S + + G A L + T DV L + + + +GK L + +
Sbjct: 5 LSLIRLPALSIVDLVGADATAILHNLTTNDVKKLTADGPQHAGLETFITNVRGKCLGHVV 64
Query: 57 ISKIEEDTFILEIDRSKR-----------DSLIDKLLFYKLRSNVI--IEIQPINGVVLS 103
+ ++ ++ ++ + Y +R + I + + ++
Sbjct: 65 VFATQDGYRMIGAPGIVATADNSGTVRQSQAIAEHADRYTIREDATPVIRDEELAAWMVI 124
Query: 104 WNQEHTFSNSSF--------------------------IDERFSIADVLLHRTWGHNEKI 137
+ ID + R + E +
Sbjct: 125 DGDAEPVQTTPLPNMTNQDGVDSYQLPWVKSGTLFLLPIDTAAEHPSRIADRLGVNAESL 184
Query: 138 A-SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
A D +H R+ G D + P +A + IS TKGCY+GQE V+R+
Sbjct: 185 AMGDENDFHVHRVAAGFPWFGIDLTDAH-LPQEADRE-TQTISFTKGCYLGQETVARLDA 242
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD-----------IEIGTLGVV------VGKKAL 239
++K+ + + P+G+ DD +G + V A+
Sbjct: 243 LGQVQKKLVRWKLSG--LPAGAEPAADDKLRALDAPEDAKPVGRITSVGRIDDQGEGLAM 300
Query: 240 AIARIDKVDHAIKKGMALTVHGV 262
AR + K ++ V
Sbjct: 301 GYARRSHFEAGEKLAGMISAGDV 323
>gi|213162057|ref|ZP_03347767.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 254
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 55 FLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV------------- 101
+ + + +E RS R++ + +L Y + S V+I ++
Sbjct: 1 MRLFRERDGFAWIE-RRSVREAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALAN 59
Query: 102 -----------LSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTY 144
+ + T ERF + A++L + G E ++ + +
Sbjct: 60 VFSELPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAE--LNNSQQW 117
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
L I GI + P + L GIS KGCY GQE+V+R + R ++
Sbjct: 118 LALDIEAGIPVIDA-ANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRAL 176
Query: 205 MIITGTDD-LPPSGSPI 220
++ G +P +G +
Sbjct: 177 WLLAGKASRVPEAGEDL 193
>gi|227876313|ref|ZP_03994426.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|227843086|gb|EEJ53282.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length = 449
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/298 (18%), Positives = 98/298 (32%), Gaps = 68/298 (22%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL
Sbjct: 71 LGVIRVSGDSRLSWLETVTTQKLAGLAPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 129
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108
++ L + RS V I VVL +
Sbjct: 130 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 187
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136
+ +ID T
Sbjct: 188 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 247
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ +D+ + +RI + +P PH+ L + +SL KGCY GQE V+++
Sbjct: 248 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVSLNKGCYTGQETVAKLV 305
Query: 196 HRNIIRKRPMIITGTD---DLPPSGSPILTD--DIEIGTLGVVV-----GKKALAIAR 243
+R +R + + +LP G+ + +G L V G+ AL + +
Sbjct: 306 NRGRPPRRLVFLDLDGTSEELPRIGTELRLAMTGEPVGNLTSVAYHPTDGQIALGVVK 363
>gi|170783039|ref|YP_001711373.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157609|emb|CAQ02807.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 384
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/315 (18%), Positives = 117/315 (37%), Gaps = 56/315 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS+++ + V G+ + +L +I + + L + + L G++ +
Sbjct: 49 AIVDLSHRAVLSVTGEDRLTWLDSITSQSLRGLAPGDSAETLFLDQNGRLEHAVGVLDDG 108
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------IEIQPINGVVLS 103
T++L + SL+ L + V + + GV L
Sbjct: 109 VSTWLL-LGAGDAASLLAYLQRMRFMLRVEPADRTAEMAVIGTLGEPDLPVAAPAGVPLV 167
Query: 104 WNQEHT---------FSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHE 146
W + +S E ++ ++ L+ R+ + + +
Sbjct: 168 WRDPWAHVVPGGHQYAAAASHPGEGWTWSERLVPRSELPGVAARAASGDLPVAGVLAAEA 227
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI T+ + PH+ L + + L+KGCY GQE V+++ + +R ++
Sbjct: 228 LRIAAWRPRFATE-VDDRTIPHELDW-LRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVL 285
Query: 207 ITGTDD---LPPSGSPIL-------TDDIEIGTLGVVV-----GKKALAIARIDKVDHAI 251
+ LP +GS + +G++ G ALA+ R VD A+
Sbjct: 286 LQLDGSDAVLPGAGSEVRLPAADDGAPGEVVGSVTSSALHHELGPVALAVVR-RNVDPAL 344
Query: 252 KKGMALTVHGVRVKA 266
+ + + VRV+A
Sbjct: 345 Q--LEVVADDVRVQA 357
>gi|260905834|ref|ZP_05914156.1| glycine cleavage T protein (aminomethyl transferase)
[Brevibacterium linens BL2]
Length = 400
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/296 (17%), Positives = 104/296 (35%), Gaps = 52/296 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V L++ +++ G + +L +I T + TL +A + +L P G+I + ++
Sbjct: 65 AIVDLAHLRILRLSGADRLTWLNSITTQKLDTLAPGVATETLVLDPNGRI--EGWLKLVD 122
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN----GVVLS----------WNQE 107
+ + I + D ++ L V IE G +++ W
Sbjct: 123 DGETLWAISELRTDDTLEFLRKMVFMMRVTIEDVSDEFQCIGALVALPDSLPVTQLWTDP 182
Query: 108 HT-----FSNSSFIDERFSIADVLLH----------------RTWGHNEKIASDIKTYHE 146
++ + +D +A R N+ + +
Sbjct: 183 WPHIGTGSASYAQVDLGLGVAGEDHPGLETQFVIGIIARADLRATSANDFTMAGFDAWEA 242
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI P + + + + L + L KGCY GQE V+R+ + +R +
Sbjct: 243 LRIAAW--RPGVNEIDHKSLVGELDL-LRTSVHLAKGCYRGQEAVARVHNLGQPPRRLVF 299
Query: 207 ITGTDD---LPPSGSPILTD----DIEIGTLGVVV-----GKKALAIARIDKVDHA 250
+ P +G+ +L + + +G L V G LA+ + + A
Sbjct: 300 VHLDGSGHIQPEAGAEVLAEVRGAERSVGQLSSVALHWELGPIGLAVVKRNLSAEA 355
>gi|302835551|ref|XP_002949337.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f.
nagariensis]
gi|300265639|gb|EFJ49830.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f.
nagariensis]
Length = 475
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 109/310 (35%), Gaps = 60/310 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G+ L TAD L + +T + L + + + +
Sbjct: 86 SHWGRLRVTGEDRTALLHNQSTADFQRLQPGQCADTTFVTSTARCL-DLATALVLPSSIL 144
Query: 67 LEID-RSKRDSLIDKLLFYKLR----------------------SNVII-EIQP--INGV 100
L +D R ++L +L R + V++ E+ P ++GV
Sbjct: 145 LLVDSREGGEALAARLDKVIFRGDNVMVHDISSRTGQIAVLGPEAEVVLRELAPDVLSGV 204
Query: 101 VLSWNQEHTF----SNSSFIDERFSIADVLLHRTWGHNEKIASDI--------------K 142
+ H F+ + + T +E +A D+
Sbjct: 205 LSGPPGRHVLVGFRGKPVFVAAVSGLGLSVPGYTLVADEAVAGDLYAAFAAKGAIPMGTD 264
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ RI G ++ P +A + +SL KGCYIGQE ++++ R+ + +
Sbjct: 265 DWEAARIVAGRPTRGSELT-EAYSPLEAGL--YGAVSLNKGCYIGQETLAKLHLRDGVNR 321
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK-----KALAIARIDKVDHAIKKGMAL 257
+ + + P G+ I ++ ++G + + R + +G +
Sbjct: 322 QLWGLRLSGPTSP-GAEIYSELSKVGVVTSTCQDADGEWVGVGYLR------SRLEGTQI 374
Query: 258 TVHGVRVKAS 267
+ GVRV +
Sbjct: 375 ELEGVRVAVA 384
>gi|269976111|ref|ZP_06183110.1| glycine cleavage T protein [Mobiluncus mulieris 28-1]
gi|307701532|ref|ZP_07638550.1| glycine cleavage T-protein C-terminal barrel domain protein
[Mobiluncus mulieris FB024-16]
gi|269935704|gb|EEZ92239.1| glycine cleavage T protein [Mobiluncus mulieris 28-1]
gi|307613324|gb|EFN92575.1| glycine cleavage T-protein C-terminal barrel domain protein
[Mobiluncus mulieris FB024-16]
Length = 415
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 99/298 (33%), Gaps = 68/298 (22%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL
Sbjct: 37 LGVIRVSGDSRLSWLETVTTQKLAGLAPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 95
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108
++ L + RS V I VVL +
Sbjct: 96 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 153
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136
+ +ID T
Sbjct: 154 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 213
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ +D+ + +RI + +P PH+ L + +SL KGCY GQE V+++
Sbjct: 214 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVSLNKGCYTGQETVAKLV 271
Query: 196 HRNIIRKRPMIITGTD---DLPPSGSP--ILTDDIEIGTLGVVV-----GKKALAIAR 243
+R +R + + +LP G+ + T +G L V G+ AL + +
Sbjct: 272 NRGRPPRRLVFLDLDGTSEELPRIGTELRLATTGEPVGNLTSVAYHPTDGQIALGVVK 329
>gi|291333965|gb|ADD93642.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C694]
Length = 119
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+LR+++ I + ++ + + + L+G+ KGCY+GQEV +R++H+ +RK
Sbjct: 2 DKLRVDYVIPEYGSELT-EESYILEMGFERLHGVDFKKGCYVGQEVTARMKHKTELRKGL 60
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
+ I ++ +G +L DD IG++ GK ALA R+ D + + +
Sbjct: 61 VKILSQHEI-SNGEELLLDDKSIGSILTTYGKSALAYVRLKNRDAILSTKNSKKI 114
>gi|154296574|ref|XP_001548717.1| hypothetical protein BC1G_12695 [Botryotinia fuckeliana B05.10]
gi|150843278|gb|EDN18471.1| hypothetical protein BC1G_12695 [Botryotinia fuckeliana B05.10]
Length = 219
Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV--LTLPYK-IARGSAILTPQGKILLYFLISK- 59
LS++ I + G ++ +LQ +IT D+ L SA L +G++L I K
Sbjct: 61 TRLSSRRLISLRGPDSMKYLQGVITNDIYKEGLNSDKKGFYSAFLNAKGRVLNDVWIYKD 120
Query: 60 ------------IEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
E + +++E+D + + L + Y++R+
Sbjct: 121 LYADRGKYGGKGKEGENWLIEVDAKEVEVLAKHIKRYRMRAK 162
>gi|113952781|ref|YP_729511.1| glycine cleavage system protein T [Synechococcus sp. CC9311]
gi|113880132|gb|ABI45090.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
protein [Synechococcus sp. CC9311]
Length = 284
Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 98/291 (33%), Gaps = 52/291 (17%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF--LISKIEEDTF 65
N +++ G + FLQ +ADV + L G++ + D
Sbjct: 9 NFPVLRLEGSGSRTFLQGQTSADVQQAEEGDLLPACWLDATGRVQALLEIRMDATGADVL 68
Query: 66 ILEIDRSKRDSLIDKLLF--YKLRSN---------VIIEIQPINGVVLSWNQEHTFSNSS 114
+L D+++F ++R ++++ QP+ V + W ++ ++
Sbjct: 69 VLAGAVDAVSQGFDRVIFPADRVRLKGIRQQRRQELLVQAQPMEPVNVFWTEDEPSAS-- 126
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
+RF ++ A++ RI G + T P + +
Sbjct: 127 ---DRFPASE-------------AANATQLDRWRIGQGWPLSAGEL-DGTTNPFELGLSP 169
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRK-----RPMIITGTDDLPPSGSPILTDDIEIGT 229
+ L KGCY+GQE V+++ + +++ R +P G+ + G
Sbjct: 170 W--VHLNKGCYLGQETVAKLASKGEVKQQLRSWRAFSSELQGTVPQRGTVLRRQGERAGV 227
Query: 230 LGVVV----------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+ + LA+ R + ++L ++ P
Sbjct: 228 ITSALEIASAEGLPQEWIGLALVRRQALADP---QLSLDNDQGSIQLFKPQ 275
>gi|306817204|ref|ZP_07450951.1| folate-binding protein YgfZ [Mobiluncus mulieris ATCC 35239]
gi|304650006|gb|EFM47284.1| folate-binding protein YgfZ [Mobiluncus mulieris ATCC 35239]
Length = 415
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 68/298 (22%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I+V G S + +L+ + T + L + + +L QG+I L F + +T+IL
Sbjct: 37 LGVIRVSGDSRLSWLETVTTQKLAGLDPGVGSEALVLDVQGRIELAFYLVDDGHNTWIL- 95
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------------------- 108
++ L + RS V I VVL +
Sbjct: 96 --TEVPEATRVFLDAMRFRSKVEITDCSQEFVVLGFLGSSLGLRDTGAVVLAGSLGASLG 153
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-------------------------------- 136
+ +ID T
Sbjct: 154 ELAKVVWIDPWPRPVGETTVYTLPEASHPGLAPHEPEKRILAVIPPENIPTFEAQAAANH 213
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ +D+ + +RI + +P PH+ L + ++L KGCY GQE V+++
Sbjct: 214 LVEADLGVWEAVRIARWRPRLGREGMPGM-LPHELDW-LRSAVALNKGCYTGQETVAKLV 271
Query: 196 HRNIIRKRPMIITGTD---DLPPSGSPILTD--DIEIGTLGVVV-----GKKALAIAR 243
+R +R + + +LP G+ + +G L V G+ AL + +
Sbjct: 272 NRGRPPRRLVFLDLDGTSEELPRIGTELRLAMTGEPVGNLTSVAYHPTDGQIALGVVK 329
>gi|308070294|ref|YP_003871899.1| aminomethyltransferase (glycine cleavage system T protein)
[Paenibacillus polymyxa E681]
gi|305859573|gb|ADM71361.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Paenibacillus polymyxa E681]
Length = 366
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 106/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A FLQ + T DV L A+ S + P G ++ L+ + ++
Sbjct: 53 SHMGEFLVEGKEAEAFLQRVTTNDVSQLEPGQAQYSLLCYPDGGVVDDLLVYCKGPEHYM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
L ++ S D L+ + + S+V IE +L+ ++
Sbjct: 113 LVVNASNIDKDWGWLIRH-MPSSVHIENVSDALALLALQGPEAARIAAAVADTDITNLAS 171
Query: 115 ------------------------------FIDERFSIADVLLHRTWGHNEKIASDIKTY 144
L R+ I + +
Sbjct: 172 FRFHENVPLFGAKALVSRTGYTGEDGFEFYVPAAEAPAVWEGLLRSGESYGLIPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + +TI P +A + + L KG +IG+E + R + + I RK
Sbjct: 232 DTLRFEARLPLYGQEL-SATISPLEAGLGYF--VKLNKGDFIGREALQRQKDQGIPRKLI 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+ +P + P+ + IG + K+ L +A +D A+ + + +
Sbjct: 289 GLEMIDRGIPRAHYPVFAEGQRIGEVTTGTQSPTLKRNLGLALVDSRFSALSTPLEVEIR 348
Query: 261 GVRVKASF 268
G R++A
Sbjct: 349 GKRLRAEV 356
>gi|76155821|gb|AAX27094.2| SJCHGC03303 protein [Schistosoma japonicum]
Length = 242
Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
FS++ ++ + + DI YH R G+ + +F+ + P +A DL G+S
Sbjct: 13 FSVSLFTVNDIFPSCDTHPLDISLYHTARWELGLPEGIKEFITNDTLPFEANTDLSGGVS 72
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+KGCYIGQE+ +R +IR+R + I
Sbjct: 73 FSKGCYIGQELTARTHFTGVIRRRYVPIK 101
>gi|146281603|ref|YP_001171756.1| aminomethyltransferase [Pseudomonas stutzeri A1501]
gi|145569808|gb|ABP78914.1| predicted aminomethyltransferase [Pseudomonas stutzeri A1501]
Length = 261
Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 36/234 (15%)
Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------ 98
+ F I E D ++L + + L Y + S + + +
Sbjct: 1 MQSSFRIVP-EGDGYLLAMAGELLQPQLADLAKYAVFSKSRLSDESADWCRFGIAGGDGT 59
Query: 99 ----GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---------YH 145
G+ LS + + I R L E++ + + +
Sbjct: 60 LVSLGLDLSQASDSIVRGNGLIAIRLPDGRAELWAPKAEAEQVRTRLSAQLGEVPVNRWL 119
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
++ GI P + L G+S KGCY GQE+V+R+Q+ +++R
Sbjct: 120 LDQVRAGIGQ-VFGSTRELFIPQMINLQALGGVSFKKGCYTGQEIVARMQYLGKLKRRLQ 178
Query: 206 IITGT---DDLPPSGSPILTD--DIEIGTL----GVVVGKKALAIARIDKVDHA 250
+ +LP G + + + +G + G + LA+ + D
Sbjct: 179 HLAVEGEPGELPAPGVELFSPVHNSSVGEVVLAATSADGIELLAVVQEDAAADG 232
>gi|148273681|ref|YP_001223242.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831611|emb|CAN02579.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 384
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 62/315 (19%), Positives = 117/315 (37%), Gaps = 56/315 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V LS+++ + V G+ + +L +I + + L + + L G++ +
Sbjct: 49 AIVDLSHRAVLSVTGEDRLTWLDSITSQSLRGLAPGDSAETLFLDQNGRLEHAVGVLDDG 108
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVI------------------IEIQPINGVVLS 103
T++L + SL+ L + V + + GV L
Sbjct: 109 VTTWLL-LGAGDAASLLAYLQRMRFMLRVEPADRTAELAVIGTLGEPDLPVAAPAGVPLV 167
Query: 104 WNQEHT---------FSNSSFIDERFSIADVLLHRT--------WGHNEKIASDIKTYHE 146
W + +S E ++ ++ L+ R+ E + +
Sbjct: 168 WRDPWAHVVPGGHQYAAAASHPGEGWTWSERLVPRSELPAVVARAVSGELPVAGVLAAEA 227
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI T+ + PH+ L + + L+KGCY GQE V+++ + +R ++
Sbjct: 228 LRIAAWRPRFATE-VDDRTIPHELDW-LRSAVHLSKGCYRGQETVAKVHNLGRPPRRLVL 285
Query: 207 ITGTDD---LPPSGSPILTDDIEIGTLGVVVGK------------KALAIARIDKVDHAI 251
+ LP +GS + GT G VVG ALA+ R VD +
Sbjct: 286 LQLDGSDAVLPGAGSEVRLPAAADGTPGEVVGAVTSSALHHELGPVALAVVR-RNVDPGL 344
Query: 252 KKGMALTVHGVRVKA 266
+ + + VRV+A
Sbjct: 345 Q--LEVVADDVRVQA 357
>gi|162454476|ref|YP_001616843.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56']
gi|161165058|emb|CAN96363.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56']
Length = 332
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 94/303 (31%), Gaps = 42/303 (13%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY----------KIARGSAILTPQGKILLYF 55
+ + V G +L ++T D+ + GKI
Sbjct: 23 MPELGTLIVTGSDRQTWLNGLVTCDLAPQKPLPAGAKAAPPAGGAYGLNVGKTGKIFAEV 82
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------ 109
I I D + R + + L + + + + ++ + +
Sbjct: 83 WIV-IAADRIYVGALRERVEQLRELFDRHLIMEDAEVQDASGEHAWAFVHGPRSADLAAA 141
Query: 110 ---------------FSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYHELRINH 151
+ + R +L E + + LR+ +
Sbjct: 142 GRAAGAEAAIVDWTGLGGALLVAPR-QAEGAVLEALLAEGEARAVLPVTAAAWEVLRVEN 200
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI--ITG 209
+ DF FP +A ++ +S +KGCY+GQE V +Q R +KR + + G
Sbjct: 201 NVPRFGVDFDDQN-FPQEASIED-RAVSFSKGCYLGQETVFMLQARGHAKKRLVQLAVEG 258
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK-KALAIARIDKVDHAIK-KGMALTVHGVRVKAS 267
+P L D +G + V + + + V + +G AL V G + +
Sbjct: 259 EGGVPAGAEIALPDGAAVGAVTSQVEDPRGTGLLALGYVKYKHAVQGTALRVAGRAAEIT 318
Query: 268 FPH 270
Sbjct: 319 RAP 321
>gi|289577512|ref|YP_003476139.1| glycine cleavage system protein T [Thermoanaerobacter italicus Ab9]
gi|289527225|gb|ADD01577.1| glycine cleavage system T protein [Thermoanaerobacter italicus Ab9]
Length = 374
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+
Sbjct: 52 SHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLVYKYSDEHFL 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + ++ KL F
Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYAVEINNISDEISELAIQGPKAEEVLQKLTDTDLSQIKF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142
+ + NV I IN ++ +I +++I + + +
Sbjct: 172 FYFKDNVKI--AGINSLISRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGVKRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G + D+ +IG + LA+ ID + +
Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344
Query: 257 LTVHGVRVKASF 268
+ + +KAS
Sbjct: 345 IVIRNKPLKASI 356
>gi|87123046|ref|ZP_01078897.1| hypothetical protein RS9917_04285 [Synechococcus sp. RS9917]
gi|86168766|gb|EAQ70022.1| hypothetical protein RS9917_04285 [Synechococcus sp. RS9917]
Length = 278
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 104/269 (38%), Gaps = 20/269 (7%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G A FL +AD+ S LT G++ LL + D +L
Sbjct: 10 LLRLQGVGARDFLHGQTSADLQQAADHALIRSCWLTATGRVQALLEVRLDDEGADVLVLS 69
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ + S D+++F R + + P+ + + + D+ D L
Sbjct: 70 GEAAALASGFDRVIFPADR----VRLLPLAQQRRLQRLQAPGVHRPWSDDVLWCDDSCLP 125
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
W + ++ R+ G+ + P + + +SL+KGCY+GQ
Sbjct: 126 AAWEALPR--AEASALEAWRLRVGLPRHPAEL-NGDTNPLELGLGDW--LSLSKGCYLGQ 180
Query: 189 EVVSRIQHRNIIRKRP----MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALA 240
E ++++ R+ ++++ ++ T G+P+ + G + + G + LA
Sbjct: 181 ETIAKLTARDGVKQKLRHWQLVEAPTGLTIEPGTPLNLSNERAGLITSALPTPGGWQGLA 240
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASFP 269
+ R A + + L G+ ++ S P
Sbjct: 241 LVR-RAALEAPQLQLQLGDEGLTLQISPP 268
>gi|238061305|ref|ZP_04606014.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
gi|237883116|gb|EEP71944.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
Length = 370
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 62/296 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + V G+ I +L + T + L +L+P G + + ++++ + DT
Sbjct: 57 SHRGIVAVPGEERIGWLHTLTTQHLAALTAGEGTELLVLSPHGHVEQHAMVAE-DGDTTW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW--------------NQEHTFSN 112
L+ + L+ L + S V +LS
Sbjct: 116 LDTEPGATGGLLTYLEKMRFFSKVEPRDATAEHALLSLVGPEATGALTTLGVTGLAAPDA 175
Query: 113 SSFIDERFSIADVLLHRT------------WGHNEKIASDI------------------- 141
+ +F ++ T W + D+
Sbjct: 176 VAVPGPKFRAGELPPRPTVRYAVAPLPGGGWARRGPLGVDLLVPRPAMDRVVAELRGAGV 235
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y +R+ D P + + + + L KGCY GQE V+R+ +
Sbjct: 236 PAVGLWAYEAIRVAARRARVGVD-TDHRTIPAEVDL-IAPAVHLDKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIITGT----DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
+R +++ D P +G+P+ D +G +G V G+ ALA+ +
Sbjct: 294 MGRPPRRLVLLHLDGVTSDQPPAAGTPVTLDGRAVGFVGTAVLHHELGQIALAVVK 349
>gi|310643481|ref|YP_003948239.1| glycine cleavage system aminomethyltransferase t [Paenibacillus
polymyxa SC2]
gi|309248431|gb|ADO57998.1| glycine cleavage system aminomethyltransferase T [Paenibacillus
polymyxa SC2]
Length = 366
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/308 (17%), Positives = 107/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A FLQ + T DV L A+ S + P G ++ L+ + ++
Sbjct: 53 SHMGEFLVEGKEAEAFLQRVTTNDVSQLEPGQAQYSLLCYPDGGVVDDLLVYCKGPERYM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
L ++ S D D L+ + + ++V ++ +L+ ++ +
Sbjct: 113 LVVNASNIDKDWDWLIRH-VPASVHLKNVSDAIALLALQGPEAARIAAAVTDTDITNLAS 171
Query: 117 --------------------------------DERFSIADVLLHRTWGHNEKIASDIKTY 144
E L R I + +
Sbjct: 172 FRFHENVQLFGAKALVSRTGYTGEDGFEFYIPAEEAPAVWDGLLRCGESYGLIPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + +TI P +A + + L KG +IG+E + R + + I RK
Sbjct: 232 DTLRFEARLPLYGQEL-SATISPLEAGLGFF--VKLNKGDFIGREALQRQKEQGIPRKLI 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+ +P + P+ + IG + K+ L +A +D + + + +
Sbjct: 289 GLEMIDRGIPRAHYPVFAEGQHIGEVTTGTQSPTLKRNLGLALVDSRFSTLSTPLEVEIR 348
Query: 261 GVRVKASF 268
G R++A
Sbjct: 349 GKRLRAEV 356
>gi|258511767|ref|YP_003185201.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478493|gb|ACV58812.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 367
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 101/297 (34%), Gaps = 47/297 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G + FLQ ++T D+ L A + + +G L L+ ++ +D F
Sbjct: 50 SHMGEIEVSGPDSFSFLQHLLTNDLARLRPGRALYTLMTDDRGGTLDDLLVYQLGDDRFW 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------S 113
L ++ + R++ + L + + V + + + +L+
Sbjct: 110 LVVNAANREADVAWLRDHIEGAGVTVTDRSDDVALLAVQGPRAADRLEQLGLLVGSLRPF 169
Query: 114 SFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRIN 150
SF RF ++++ RT E + LR+
Sbjct: 170 SFTSARFQEGEIMVSRTGYTGEDGFELYTDGETARKLFEALQALGVTPCGLGARDTLRLE 229
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + + P +A + + KG +IG+E + R+ +
Sbjct: 230 ACLPLYGQELRRD-VTPLEASLAPF--VKFDKGDFIGREALLSQAEAGPSRRLVGVEMAD 286
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261
+P +G + + +G + LA+ + A+ + + + + G
Sbjct: 287 RAIPRTGYAVFRGEQRVGEITSGTLSPTLERPIGLALV--NASAAAVGETLEVEIRG 341
>gi|256751104|ref|ZP_05491986.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750010|gb|EEU63032.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 368
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 57/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+
Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFL 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + ++ KL F
Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAVQGPKAEEILQKLTYTDLSEIKF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142
+ + NV I I +V +I +++I + + +
Sbjct: 172 FYFKDNVKI--AGIECLVSRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G + D+ +IG + LA+ ID + +
Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344
Query: 257 LTVHGVRVKA 266
+ + +KA
Sbjct: 345 IVIRNKPLKA 354
>gi|116071548|ref|ZP_01468816.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
gi|116065171|gb|EAU70929.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
Length = 265
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 99/253 (39%), Gaps = 25/253 (9%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G+ FLQ +AD+ P + L+ G++ LL + D +L
Sbjct: 13 LLRLEGEGTRNFLQGQTSADMTDTPEGALVQTCWLSATGRLRALLEVRLRANGADVLVLA 72
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + D+++F R + +QPI Q S I + D L
Sbjct: 73 GDATAVAKGFDQVIFPADR----VRLQPITE------QRRVQPLSKTITALWLDHDSPLP 122
Query: 129 RTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+W N + ++ + E R+ G + N D P + + L +SL+KGC++G
Sbjct: 123 PSWTSNPADSKQLERWRIEQRLAFGAGELNAD-----ANPFELGLTDL--VSLSKGCFLG 175
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIAR 243
QE V+++ + ++ + +P G + + GT+ V+ G LA+ R
Sbjct: 176 QETVAKLANLGGTKQEL-RGWICNHVPSVGDTLRANGERAGTITSVLDTPEGSIGLALVR 234
Query: 244 IDKVDHAIKKGMA 256
+ G
Sbjct: 235 RLHLGAETLDGSD 247
>gi|55379206|ref|YP_137056.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
gi|55231931|gb|AAV47350.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
Length = 361
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/305 (17%), Positives = 101/305 (33%), Gaps = 59/305 (19%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I V G+ + ++ ++ V + +L P G++ + E ++
Sbjct: 48 YGVIVVTGEDRVDYVDNAVSNRVPD-EDGAGCYALLLDPDGRVDTDMYVYNAGE-RLLVF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTF------------SNSSF 115
K + L + K V E + V + +
Sbjct: 106 TPPQKAEELAAEWA-DKTFIQDVEFEEATDDFAVFGVHGPKATEKIASVLHQTGTPPAPL 164
Query: 116 IDER--FSIADVLLHRTWGHNEKIASDI--------------------------KTYHEL 147
ER A V + RT + + D+ +T+ L
Sbjct: 165 TFERGELGDAGVSVIRTDDLAGEESYDVVCSADDAETVFDTLVNRGLNAVPFGYQTWETL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G +T+ P+D + N + KGCY+GQEVVSRI++R +R + +
Sbjct: 225 TLEAGTPLFDTEI--EGALPNDLGL--RNALDFEKGCYVGQEVVSRIENRGHPTQRLVGL 280
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261
+ P G+ + D +G + ALA ++ + A+K + + G
Sbjct: 281 -AVEACPDPGAAVFAGDEHVGDVTRAAQSPMREAPIALANLSWERPEEALK----IRIDG 335
Query: 262 VRVKA 266
V A
Sbjct: 336 EPVSA 340
>gi|320449502|ref|YP_004201598.1| aminomethyltransfersae [Thermus scotoductus SA-01]
gi|320149671|gb|ADW21049.1| aminomethyltransfersae [Thermus scotoductus SA-01]
Length = 259
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 93/266 (34%), Gaps = 36/266 (13%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ V G A+ FLQ T D+ L G+ L +G+I + + E+ F+L
Sbjct: 19 GLLLVRGPDALSFLQGQATRDLRRLSGP--VGALFLNHRGQIEEAATVF-VHEEGFLL-A 74
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ L +L Y + V + P+ + + +E + A V
Sbjct: 75 PWGTLEGLRARLKRYIVFDQVELLELPLYRRLHADGREEVAESGEGAHP----AGVYPLY 130
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
T + SDI+ P + L+ + KGCY+GQE
Sbjct: 131 TLLKGLPLLSDIR---------------------GELPQSVGL--LHLVDYGKGCYVGQE 167
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARID 245
+++R++ + + + + G + +L + ++G V G LA+ R +
Sbjct: 168 IMARLEGK-EVHHHLVGLRGLSPAQEAPFDLLLEGRKVGEAKRVMETPFGVFGLAVMRKE 226
Query: 246 KVDHAIKKGMALTVHGVRVKASFPHW 271
A+ +G + W
Sbjct: 227 VPLGAVVEGGGGRFRVEPLPFEEAAW 252
>gi|168703292|ref|ZP_02735569.1| glycine cleavage system T protein [Gemmata obscuriglobus UQM 2246]
Length = 340
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 83/274 (30%), Gaps = 48/274 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFIL 67
+ + G A FL + T D LP + P+ K+ I I +
Sbjct: 31 LVLTGPDAPMFLGNLSTNDTKELPLGGGCEAYFCDPRAKVKFQTWIYHIRLSDGRHAMWV 90
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--VLSWNQEHTFSNSSFIDE------- 118
E + L+ L Y + V I + + L+ ++ +
Sbjct: 91 ETTAGRNTELVQYLDRYLISEQVEIADRTADFAQLHLAGPGAAAVLGTALGEPVPDLPPF 150
Query: 119 ------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR 148
R +AD + R + + + LR
Sbjct: 151 AHMERTFGGTATCSLRRRDQLGVPGFDIVCRTDVADG-VRRLLSAAGAVPAGPDVFETLR 209
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE--VVSRIQHRNIIRKRPMI 206
I G D + F + +S +KGCY+GQE V++R + ++ R +
Sbjct: 210 IEAGAPVFGKDIDENR-FVMEVGFAP-RAVSYSKGCYLGQEPIVMARDRAGHVNRAFLGV 267
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
P+G+ + D E+G + L
Sbjct: 268 KVLEGGPLPAGTKLFRDGAEVGLVTSSCDSPRLG 301
>gi|218289656|ref|ZP_03493876.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218240306|gb|EED07489.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 350
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 101/297 (34%), Gaps = 47/297 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G + FLQ ++T D+ L A + + +G + L+ ++E+ F
Sbjct: 33 SHMGEIEVFGPDSFSFLQRVLTNDLARLRPGRALYTLMTDDRGGTIDDLLVYRLEDSRFW 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------------FSNS 113
L ++ + R++ L + +NV + + + +++
Sbjct: 93 LVVNAANRETDAAWLKDHIEAANVTVTDRSDDVALIAVQGPRAVDRLEQLGLSVGSLRPF 152
Query: 114 SFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRIN 150
SF RF ++++ RT E + LR+
Sbjct: 153 SFTSARFQDGEIMISRTGYTGEDGFELYTDGETARALFEALRALGVTPCGLGARDTLRLE 212
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + + P +A + + KG +IG+E + R+ +
Sbjct: 213 ACLPLYGQELRRD-VTPLEASLAPF--VKFDKGDFIGREALLSQAEAGPSRRLVGVEMAD 269
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261
+P +G + + +G + LA+ D AI + + + + G
Sbjct: 270 RAIPRTGYAVFRGEQRVGEITSGTLSPTLERPIGLALV--DASAAAIGETLEVEIRG 324
>gi|293191194|ref|ZP_06609127.1| folate-binding protein YgfZ [Actinomyces odontolyticus F0309]
gi|292820615|gb|EFF79584.1| folate-binding protein YgfZ [Actinomyces odontolyticus F0309]
Length = 389
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 52/290 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V + + I V G + ++ ++ + +V L +R IL+P+G++ + + +
Sbjct: 39 ALVRRPDLAVISVSGADRLTWVTSLASQNVTDLVPGASRELLILSPEGRVEHWA-GASDD 97
Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR-----SNVII------------EIQPINGVVL 102
+T L ++RS + L + LR +V + + G +
Sbjct: 98 GETLHLIVERSDVSEFVAFLESMRFALRVAVSERDVAVFSSIRAGANMPESAADLPGHLW 157
Query: 103 SWNQEHT---------FSNSSFIDERFSIADVLLHRTWGHNEKIA-------------SD 140
+W F R + + R + A +
Sbjct: 158 TWEDPWPGVVEGGAAYFQGECHPGARTPMMFHAVSREAADEFEAAWLSACPEAGSRRRAG 217
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ RI + + P + L + + TKGCY GQE ++R+ +
Sbjct: 218 YLAWEATRIAAWKPRLGRE-TDARAIPPELDW-LRSAVHTTKGCYRGQETIARVLNLGRP 275
Query: 201 RKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242
+R + DLP G+PI ++G + G ALA+
Sbjct: 276 PRRLTYLQLDGSRGDLPAPGTPIEVGGRQVGVITSSARHADEGPIALALI 325
>gi|167038372|ref|YP_001665950.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116776|ref|YP_004186935.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|238687722|sp|B0KD95|GCST_THEP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166857206|gb|ABY95614.1| glycine cleavage system T protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929867|gb|ADV80552.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 368
Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 57/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F+
Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFL 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + ++ KL F
Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAVQGPKAEEILQKLTYTDLSEIKF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142
+ + NV I I +V ++ ++++ + + +
Sbjct: 172 FYFKDNVKI--AGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G + D+ +IG + LA+ ID + +
Sbjct: 287 IVGFEMIDNGIPRHGYEVRADNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344
Query: 257 LTVHGVRVKA 266
+ + +KA
Sbjct: 345 IVIRNKPLKA 354
>gi|297543822|ref|YP_003676124.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841597|gb|ADH60113.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 368
Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 104/312 (33%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ LI K ++ F+
Sbjct: 52 SHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLIYKYSDEHFL 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + +++KL F
Sbjct: 112 LVVNAANIEKDYKWMNDNKGVYAVEINNISDEISELAIQGPKAEEVLEKLTDTDLSQIKF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142
+ + NV I IN ++ +I ++++ + + +
Sbjct: 172 FYFKDNVKI--AGINSLISRTGYTGEDGFEIYIPNKYAVELWEKIIEVGKEYGLKPAGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G + + +IG + LA+ + + +
Sbjct: 287 IVGFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLALIDVKYAK--LGNQIE 344
Query: 257 LTVHGVRVKASF 268
+ V +KAS
Sbjct: 345 IVVRNKPLKASI 356
>gi|116515194|ref|YP_802823.1| YgfZ [Buchnera aphidicola str. Cc (Cinara cedri)]
gi|116257048|gb|ABJ90730.1| predicted folate-dependent regulatory protein involved in
one-carbon metabolism [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 324
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 92/267 (34%), Gaps = 40/267 (14%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + L S I+V GK +L T ++ T+ + A GK+L F I K +
Sbjct: 20 TFIELDQWSIIRVKGKDKRNYLNNQFTININTINKNKYKIGAHCNINGKVLAIFFIFKYK 79
Query: 62 EDTFIL----EIDRSKRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWN--- 105
+ F + D+ + L Y L + + N L N
Sbjct: 80 DSFFYIINNSVCDKHLIE-----LKKYSLFYKIKIFKEKKFHLFGLCGSNSYYLLKNFFF 134
Query: 106 ------------QEHTFSNSSFIDERFSIA--DVLLHRTWGHNEK--IASDIKTYHELRI 149
+ F ++ +RF I +LH N+K + S+ K + L I
Sbjct: 135 IHFKKKNMVTKIKNIIFLKINYPVKRFLILTKGNMLHNFLNDNKKKILFSNNKQWISLDI 194
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ + N IS TKGCY GQE++ + +++ I + + G
Sbjct: 195 ESSFP-IVNKTISGRFILQTLDLKKWNAISFTKGCYYGQEMLCKYENKKINKFIICALIG 253
Query: 210 T--DDLPPSGSPILTDDIEIGTLGVVV 234
+ +P + + D E +
Sbjct: 254 RIGNTIPINNENVKYKDKEGNKYISGI 280
>gi|313127513|ref|YP_004037783.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
gi|312293878|gb|ADQ68338.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
Length = 364
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/307 (17%), Positives = 105/307 (34%), Gaps = 59/307 (19%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ V G I F+ ++ V + +L PQG+I + E +
Sbjct: 48 YGVVVVEGDDRIEFVDNAVSNRVPD-ADGEGVYALLLDPQGRIETDMYVYNAGE-RLLCF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPIN-GVVLSWNQEHT------FSNSSFIDE-- 118
+ + L++ K+ V I + GV + T + ++ +
Sbjct: 106 TPPKRAEPLVEDWS-EKVFIQDVSIRDATADFGVFGVHGPQSTEKVASVLNGAAAPEPAL 164
Query: 119 ---RFSIADVLLHRTWGHN------------EKIASDI----------------KTYHEL 147
R S+ + + G A+D+ T+ L
Sbjct: 165 SFVRGSMGNAGVTVIAGDGLVGEEGYEVVCTADAAADVFDTLLTNGMNAVPFGYATWDML 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
G +T+ + ++ L N + KGCY+GQEVVS++++R +R + +
Sbjct: 225 TAEAGTPLFDTELVGRVPN----VLGLRNALDFEKGCYVGQEVVSKVENRGRPSQRLVGL 280
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHG 261
+ LP SG+ + D +G + V ALA+ D+ ++ + V
Sbjct: 281 R-PEALPESGAAVFNGDSSVGEVTRAVESPMLESPIALALLDFDEDASTVQ----VRVDE 335
Query: 262 VRVKASF 268
V A
Sbjct: 336 KEVTADV 342
>gi|1303890|dbj|BAA12546.1| YqhI [Bacillus subtilis]
Length = 362
Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 92/285 (32%), Gaps = 53/285 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + E+ ++
Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + + +V I+ Q +L+
Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 168
Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
+FIDE R + + ++ I +
Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + RK
Sbjct: 229 DTLRFEANVPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
+ +P G + + +G + LA+
Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330
>gi|167038901|ref|YP_001661886.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter sp. X514]
gi|300913511|ref|ZP_07130828.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|307266391|ref|ZP_07547928.1| glycine cleavage system T protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|307723474|ref|YP_003903225.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
gi|238687585|sp|B0K242|GCST_THEPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166853141|gb|ABY91550.1| glycine cleavage system T protein [Thermoanaerobacter sp. X514]
gi|300890196|gb|EFK85341.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|306918564|gb|EFN48801.1| glycine cleavage system T protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|307580535|gb|ADN53934.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
Length = 368
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 97/308 (31%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F
Sbjct: 52 SHMGEITVKGREAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFY 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L ++ + + + K V IE I + + D S
Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEIENISDEVAELAIQGPKAEEILQKLTDTDLSEIKF 171
Query: 123 -----------ADVLLHRTWGHNEKIAS-------DIKTY-------------------- 144
+ L+ RT E ++ +
Sbjct: 172 FCFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 232 DTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRKIV 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ +P G + + +IG + LA+ ID + + +
Sbjct: 289 GFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIEIV 346
Query: 259 VHGVRVKA 266
+ +KA
Sbjct: 347 IRNKPLKA 354
>gi|154508513|ref|ZP_02044155.1| hypothetical protein ACTODO_01014 [Actinomyces odontolyticus ATCC
17982]
gi|153798147|gb|EDN80567.1| hypothetical protein ACTODO_01014 [Actinomyces odontolyticus ATCC
17982]
Length = 389
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 52/290 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V + + I V G + ++ ++ + V L ++R IL+P+G++ + + +
Sbjct: 39 ALVRRPDLAVISVSGADRLMWVTSLASQIVTDLVPGVSRELLILSPEGRVEHWA-GASDD 97
Query: 62 EDTFILEIDRSKRDSLIDKLL--FYKLR-----SNVII------------EIQPINGVVL 102
+T L ++RS + L + LR S+V++ + + G V
Sbjct: 98 GETLHLIVERSDVSEFVAFLESMRFALRVAVSESDVVVFSSVRAGANTPESVADLPGHVW 157
Query: 103 SWNQEHTF----SNSSFIDERFSIA--DVLLHRTWGHNEKIASDIK-------------- 142
+W + F ER A ++ H
Sbjct: 158 TWEDPWPGVVEGGAAYFQGERHPGARTPMMFHAVSREAADEFEAAWLSACPEDGSRRRAG 217
Query: 143 --TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ +R+ + + P + L + + TKGCY GQE ++R+ +
Sbjct: 218 YLAWEAMRVAAWKPRLGRE-TDARAIPPEVDW-LRSAVHTTKGCYRGQETIARVLNLGRP 275
Query: 201 RKRPMIITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242
+R + DLP G+PI ++G + G ALA+
Sbjct: 276 PRRLTYLQLDGSRGDLPAPGTPIEVGGRQVGVITSSARHADEGPVALALI 325
>gi|308174251|ref|YP_003920956.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens DSM 7]
gi|307607115|emb|CBI43486.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens DSM 7]
gi|328554197|gb|AEB24689.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens TA208]
gi|328912590|gb|AEB64186.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens LL3]
Length = 366
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 111/316 (35%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G+ A+ FLQ ++T DV L K A +A+ P G + LI + E ++
Sbjct: 50 SHMGEVEVSGQDALSFLQKMMTNDVADLKPKSALYTAMCYPDGGTVDDLLIYQKSETCYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112
L I+ S + + L + + +V + Q +L+ +
Sbjct: 110 LVINASNIEKDLAWLKEHA-KGDVTLTNQSDEISLLAVQGPNAQTVLSKLTECDLASLKP 168
Query: 113 SSFIDERF-SIADVLLHRT--------------------------WGHNEK-IASDIKTY 144
+FIDE + VLL RT G NE + +
Sbjct: 169 FTFIDEADVAGRQVLLSRTGYTGEDGFELYCRNGDAVHLFKEILAAGENEGLVPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + + RK
Sbjct: 229 DTLRFEAKLALYGQELTKD-ITPIEAGIGF--AVKHKKDSDFFGKSVLSEQKEKGAPRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
+ +P G + D + IG + LA+ + + + + + +
Sbjct: 286 VGLEMIEKGIPRHGYAVKKDGVAIGEVTTGTQSPTLKKNIGLALIKTEFSEIGTEVEVEI 345
Query: 258 TVHGVRVKASFPHWYK 273
V+ K +YK
Sbjct: 346 RKKTVKAKIVRTPFYK 361
>gi|321311941|ref|YP_004204228.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
gi|320018215|gb|ADV93201.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
Length = 362
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 93/285 (32%), Gaps = 53/285 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ ++
Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + + +V I+ Q +L+
Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADVSALKP 168
Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
+FIDE R + + ++ I +
Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + RK
Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHNKESDFFGKSVLSEQKENGAKRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
+ +P G + + +G + LA+
Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330
>gi|330470354|ref|YP_004408097.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
gi|328813325|gb|AEB47497.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
Length = 370
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/316 (16%), Positives = 101/316 (31%), Gaps = 57/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ I V G I +L + T + L +L+P G I + ++++ + DT
Sbjct: 57 SHRGVIAVPGADRISWLHTLTTQHLAELGPWQGTELLVLSPNGHIEQHAMVAE-DGDTTW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
L+ + + L+ L + S V + +LS + +D
Sbjct: 116 LDTEPGATEGLLTYLEKMRFFSRVEPRDVTADQALLSLVGPRVAEALALLDVPTLNAPDV 175
Query: 118 -----ERFSIADVLLHRT------------WGHNEKIASDI------------------- 141
+F +V T W + D+
Sbjct: 176 SGVPGPKFRSGEVPPRPTARYDVKPLPSGGWARRGPLGVDLLVPRTAMDQVVTRLRDGGV 235
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
Y +R+ D + + + + L KGCY GQE V+R+ +
Sbjct: 236 GVAGLWAYEAVRVAARRARVGVD-TDHRTIAAEVDL-IAPAVHLDKGCYRGQETVARVHN 293
Query: 197 RNIIRKRPMIITG----TDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIK 252
+R +++ TD LP +G+P+ +G +G V L + + ++
Sbjct: 294 MGRPPRRLVLLHLDGVTTDQLPVAGTPVDLAGRTVGFVGTAVHHHELGQVALAVIKRSVP 353
Query: 253 KGMALTVHGVRVKASF 268
L V
Sbjct: 354 DDAVLRVGESAAAIDR 369
>gi|326391263|ref|ZP_08212805.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325992711|gb|EGD51161.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 368
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 101/310 (32%), Gaps = 57/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FLQ +IT D+ L + + G ++ L+ K ++ F
Sbjct: 52 SHMGEITVKGREAFKFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFY 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + ++ KL F
Sbjct: 112 LVVNAANIEKDYKWMKDNKGVYEVEINNISDEISELAIQGPKAEEILQKLTDTDLSQIKF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI-ADVLLHRTWGHNEKIASDIK 142
+ + NV I I +V ++ ++++ + + +
Sbjct: 172 FCFKDNVKI--AGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + KG +IG++ + + + + RK
Sbjct: 230 ARDTLRFEAGLPLYGNEL-SEEITPLEAGFEFF--VKFDKGNFIGKDALLKQKEEGLKRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G + + +IG + LA+ ID + +
Sbjct: 287 IVGFEMIDNGIPRHGYEVRAHNQKIGYVTTGYFSPTLKKNIGLAL--IDSKYAQLGNQIE 344
Query: 257 LTVHGVRVKA 266
+ + +KA
Sbjct: 345 IVIRNKPLKA 354
>gi|291484901|dbj|BAI85976.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. natto BEST195]
Length = 362
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 93/285 (32%), Gaps = 53/285 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + EE+ ++
Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENRYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + + +V I+ Q +L+
Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADVSALKP 168
Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
+FIDE R + + ++ I +
Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + RK
Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
+ +P G + + +G + LA+
Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330
>gi|33864136|ref|NP_895696.1| hypothetical protein PMT1869 [Prochlorococcus marinus str. MIT
9313]
gi|33635720|emb|CAE22044.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 283
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 30/274 (10%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G + FL +AD+L LT G++ LL + + D +L
Sbjct: 15 LLRLEGSGSRDFLHGQTSADLLAAETGSLLRCCWLTATGRVRALLEIRLDERGADVLVLA 74
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + + ++++F V ++ + Q + + + D L
Sbjct: 75 GDHNAVATGFEQVIFPA--DQVRLKPSKPIRRLQILAQ---LKQEQTPEVTWLLPDEPLP 129
Query: 129 RTWGHNEKIASD-IKTYHELRINHGIV-DPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ W ++ ++D I+++ R+ G+ +P + P + + +SL+KGCY+
Sbjct: 130 KQWAAMQQASADQIESW---RLKQGLPLEPGE--INGDTNPFELGLTAW--VSLSKGCYL 182
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-----DIEIGTLGVV------VG 235
GQE ++++ + I+++ + I + + G + V G
Sbjct: 183 GQETLAKLANSGGIKQQLRYWQANRPIAVGQKLINLEPEAGVNNRAGVITSVMQDQASTG 242
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ R + A + L RV+ S P
Sbjct: 243 SHGLALVRRKSLTEA---ELCLAEDSTRVRLSIP 273
>gi|86739182|ref|YP_479582.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
CcI3]
gi|86566044|gb|ABD09853.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
CcI3]
Length = 385
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 99/295 (33%), Gaps = 65/295 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ ++V G + +L +I + + L + +L+P G + + L+ + +
Sbjct: 55 SHRDVLRVSGPDRLSWLHSITSQHLSALGALRGTEALVLSPHGHVEHH-LVLADDGTSTW 113
Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWN------------------- 105
++++ L+ L + LR +E + V +
Sbjct: 114 VDVEPGTGGILLRYLESMRFMLR----VEPADLGAVTAVLSVLGPRAAQVAAAALGGPGD 169
Query: 106 ---------QEHTFSNSSFIDERFSIA---------------DVLLHRT--------WGH 133
+ + I + + D+L+ R
Sbjct: 170 GAPGPGLPEPQAPGPVGAPITGPYPVGRTGTGTLVRRMPHGVDLLVGRADLTGTVERLRA 229
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ + + +RI + + PH+ L + + L KGCY GQE V+R
Sbjct: 230 AGAGLAGLSAFDAMRIASRRPRLSRE-TDHRTIPHEVGW-LASAVHLDKGCYRGQETVAR 287
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIAR 243
+ + +R +++ + S + E+G +G +G ALA+ +
Sbjct: 288 VHNLGRPPRRLVLLHLDGTVAAPRSTVTVGGREVGFVGSSEVHEELGPIALAVIK 342
>gi|124024186|ref|YP_001018493.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|123964472|gb|ABM79228.1| Predicted aminomethyltransferase GcvT-like protein [Prochlorococcus
marinus str. MIT 9303]
Length = 283
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 30/274 (10%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFILE 68
+++ G + FL +AD+L LT G++ LL + + D +L
Sbjct: 15 LLRLEGAGSRDFLHGQTSADLLAAETGSLLRCCWLTATGRVRALLEIRLDERGADVLVLA 74
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + + ++++F V ++ + Q + + + D L
Sbjct: 75 GDHNAVATGFEQVIFPA--DQVRLKPSKPIRRLQILAQ---LKQEQTPEVTWLLPDEPLP 129
Query: 129 RTWGHNEKIASD-IKTYHELRINHGIV-DPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ W ++ ++D I+++ R+ G+ +P + P + + +SL+KGCY+
Sbjct: 130 KQWAAMQQASADQIESW---RLKQGLPLEPGE--INGDTNPFELGLTAW--VSLSKGCYL 182
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD-----DIEIGTLGVV------VG 235
GQE ++++ + I+++ + I + + G + V G
Sbjct: 183 GQETLAKLANSGGIKQQLRYWQANRPIAVGQKLINLEPEAGVNNRAGVITSVMQDQASTG 242
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ R + A + L RV+ S P
Sbjct: 243 SYGLALVRRKALTEA---ELCLAEDSTRVRLSIP 273
>gi|268317357|ref|YP_003291076.1| glycine cleavage system T protein [Rhodothermus marinus DSM 4252]
gi|262334891|gb|ACY48688.1| glycine cleavage system T protein [Rhodothermus marinus DSM 4252]
Length = 375
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/323 (15%), Positives = 107/323 (33%), Gaps = 67/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A F+Q +IT D L A + + TP+G ++ L+ + + +T++
Sbjct: 54 SHMGEIFVRGPRAFDFVQHLITNDAARLYDGRALYTVMCTPEGGVVDDLLVYRFDAETYL 113
Query: 67 LEIDRSKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110
L ++ + + + +E + +L+ F
Sbjct: 114 LVVNAANIEKDFAWMQANNPM-----GAHLENRSDEIALLALQGPAAFEIARHFVPDLAP 168
Query: 111 -----------SNSSFIDERFSIADVLLH----------------RTWGHNEKI------ 137
+F+D R+++ + R W ++
Sbjct: 169 NNPRYYHFRVMEPGTFLDCRWAVLSHTGYTGEPGLEIYCHADEAVRVWDALLEVGQAHGL 228
Query: 138 -ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ + LR+ G + + P +A + + + KG +IG+E + R++
Sbjct: 229 KPAGLGARDTLRLEAGYCLYGHEL-DESTNPLEAGLSWV--VKFDKGDFIGREALLRVRE 285
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIA--RIDKV 247
R+ +I +P +G PI IG + AL R D
Sbjct: 286 NGPARRLIGLILEERGIPRAGYPITDEGGTSIGKVTSGTLSPVLQQGIALGYVPNRPDYT 345
Query: 248 DHAIKKGMALTVHGVRVKASFPH 270
+ + G+ + + + P
Sbjct: 346 EPGRRLGVQIRSQILPARVHKPP 368
>gi|88808046|ref|ZP_01123557.1| hypothetical protein WH7805_07786 [Synechococcus sp. WH 7805]
gi|88788085|gb|EAR19241.1| hypothetical protein WH7805_07786 [Synechococcus sp. WH 7805]
Length = 290
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 89/272 (32%), Gaps = 21/272 (7%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTF 65
+ I++ G + FL +A V + L G++ LL + D
Sbjct: 16 HFDVIRLEGSGSAGFLHGQTSARVDGAALGQLLQACWLNATGRVQALLELRLDDQGADVL 75
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+L + +D+++F R V + + + + + + A V
Sbjct: 76 VLNGNSDHLAKGLDRVIFPADR--VRLGPARQQRRLQHLSSDQAPGPETVL--WLDDAAV 131
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCY 185
A+D++ + R+ G + P + + ++L KGCY
Sbjct: 132 PPPPWDRTQACAAADLERW---RLRQGWPLGAEEI-NGDTNPFELGLAGW--VNLEKGCY 185
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVGKK----- 237
+GQE ++++ R ++++ D + G + + G + V
Sbjct: 186 LGQETLAKLGSRGAVKQQLRSWQCADPVAAELKPGDGLTLNGERAGRITSVAHPNACEPQ 245
Query: 238 -ALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
LA+ R ++ + + +
Sbjct: 246 CGLALIRRQALEAEELQSETTESRPHPLTLTL 277
>gi|169829067|ref|YP_001699225.1| aminomethyltransferase [Lysinibacillus sphaericus C3-41]
gi|254797877|sp|B1HSN7|GCST_LYSSC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|168993555|gb|ACA41095.1| Aminomethyltransferase [Lysinibacillus sphaericus C3-41]
Length = 367
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 103/308 (33%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ +D ++
Sbjct: 53 SHMGEILVTGPDALNFLQNLLSNDVSKIATGQAQYTAMCYENGGVVDDLLTYKLADDHYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-------------------------V 101
L ++ + + D +L + + +V I+ Q
Sbjct: 113 LCVNAANIEKDYDWMLENQHQYDVTIDNQSDAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144
+ + + + R +G E I + +
Sbjct: 173 FRFQENVEVTGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILDAGQDKGVVPAGLGCR 232
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G+ + +TI P +A + + L K +IG + + + + RK
Sbjct: 233 DTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEDFIGHDALVAQKENGLPRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
I +P G + D EIG + A+ ID I M +
Sbjct: 290 GIEMIDKGIPRHGYKVFKDGKEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGNEMEIE 347
Query: 259 VHGVRVKA 266
+ G ++K
Sbjct: 348 IRGKQLKV 355
>gi|221310380|ref|ZP_03592227.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. 168]
gi|221314704|ref|ZP_03596509.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319627|ref|ZP_03600921.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221323903|ref|ZP_03605197.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. SMY]
gi|255767552|ref|NP_390337.2| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. 168]
gi|251757269|sp|P54378|GCST_BACSU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|225185180|emb|CAB14388.2| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis subsp. subtilis str. 168]
Length = 362
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 92/285 (32%), Gaps = 53/285 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV L A+ +A+ P G + LI + E+ ++
Sbjct: 50 SHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + + +V I+ Q +L+
Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 168
Query: 113 SSFIDE-----------RFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
+FIDE R + + ++ I +
Sbjct: 169 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAMHIWKKIIDAGDAYGLIPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + RK
Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
+ +P G + + +G + LA+
Sbjct: 286 VGLEMIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 330
>gi|255717402|ref|XP_002554982.1| KLTH0F18326p [Lachancea thermotolerans]
gi|238936365|emb|CAR24545.1| KLTH0F18326p [Lachancea thermotolerans]
Length = 480
Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/443 (15%), Positives = 118/443 (26%), Gaps = 174/443 (39%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITA------------------------------DV 31
L N+S + V G ++ FL ++T+ D+
Sbjct: 31 QYCELPNKSHVHVRGPDSVKFLNGLVTSKLLPTYVKKKLTTISVEEEDGIESENVEQFDM 90
Query: 32 LTLP--------------YKIARGSAILTPQGKILLYFLISKIEE----------DTFIL 67
+ + +L +G++L +I + F++
Sbjct: 91 TKGNWGLFNEAGEFGPFLSRFGTYTGLLNSKGRLLTDAIIYPVPLLIDSGPARKYPEFLV 150
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-----GVVLSWNQEHTFSNSSFIDERFSI 122
E+DRS D + + L S V + P V + + Q + +I+ +
Sbjct: 151 EVDRSISDKIEKIFDSHTLVSKVKSHLVPDQKLRTWHVSIGFPQMAGLEENPWINNLMTP 210
Query: 123 ADVLLHR---------------------------TWGHNEKIASDIKTYHELRI------ 149
+ L R +N + +D RI
Sbjct: 211 LEALKTRESSLSFAQHLLATFFAGAEDKIVAAFIDARYNSTLFNDPHAPQVFRIITRAET 270
Query: 150 --------NHGIVDPNTDFLPSTIFPH--------------------------DALMDLL 175
G DF + PH + D L
Sbjct: 271 TDLSKSFNPQGFP---FDFAIEAVTPHHARCQRFESGLIDGLEDFRPETLLPLELNFDFL 327
Query: 176 -NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT------------------------ 210
N +S KGCY+GQE+ +R I+RKR + +
Sbjct: 328 PNAVSFDKGCYVGQELTARTFSTGILRKRAVPVKIENSHFLQGAGFEKYPAILVEKESNG 387
Query: 211 ---DDLPPSGSPILTD--------DIEIGTLGVVVGKKALAIARIDKVDHAIKK------ 253
+ P SP + G+L G + +AI R + A
Sbjct: 388 DQVEPSPQPLSPFSSSVIPRKQRRQRPAGSLLCFEGDRGIAILRSEYFQSAFTDAVDRPT 447
Query: 254 ---GMALTVHGVRVKASFPHWYK 273
+ T V + P WY+
Sbjct: 448 FRVELPDTDARVTIVPQVPQWYE 470
>gi|289581173|ref|YP_003479639.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
gi|289530726|gb|ADD05077.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
Length = 384
Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/326 (17%), Positives = 107/326 (32%), Gaps = 74/326 (22%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I V G+ ++ +++ V + +L PQG+I + I E +L
Sbjct: 48 YGVITVTGEDRRDYVDNVVSNHVPE-TDGQGCYALVLGPQGRIEVELYIYNAGE-RILLF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT-------FSNSSFIDERF 120
+ L K+ V I++ + + + ++ DER+
Sbjct: 106 TPPGEAKELAADWS-EKVFIQDVEIDVATDEFAIFGIHGPQATEKVASVLNGAASPDERY 164
Query: 121 SI-------ADVLLHRTWGHNEKIA-------SDIKTYHELRINHGIVDPNTDFLPSTIF 166
S A V + RT + D++ +++ +N G+ +
Sbjct: 165 SFVRGTMGDAGVSVIRTDALTGEETYEVICGIDDVEAVYDVLLNQGLNAAPFGYRTRDSL 224
Query: 167 PHDAL---------------MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
++ + L + KGCY+GQEVVSR+++R +R + +T
Sbjct: 225 ALESGSALFETELEGTVPNVLGLTTALDFEKGCYVGQEVVSRVENRGQPSRRLIGLTIEV 284
Query: 212 D----------------------LPPSGSPILTDDIEIGTLGVVVG-------KKALAIA 242
D +P G+ + D +G + G ALA+
Sbjct: 285 DAASEPEAEAEPESHTDADAAELVPNPGAAVFDGDASVGEI-SRAGLSPLLETPIALALL 343
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASF 268
D + + V G V A+
Sbjct: 344 EYDHEGESFT----VRVGGEEVPATR 365
>gi|296333386|ref|ZP_06875839.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675108|ref|YP_003866780.1| glycine cleavage system protein T [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149584|gb|EFG90480.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413352|gb|ADM38471.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 362
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/303 (17%), Positives = 98/303 (32%), Gaps = 57/303 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G ++PFLQ ++T DV +L A+ +A+ P G + L+ + E+ ++
Sbjct: 50 SHMGEIEVSGNDSLPFLQRLMTNDVSSLSAGRAQYTAMCYPDGGTVDDLLVYQKGENRYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + + +V I+ +L+
Sbjct: 110 LVINASNIDKDLAWMKEHAA-GDVQIDNLSDQIALLAVQGPKAETILKNLTASDMSALKP 168
Query: 113 SSFIDE-RFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
FID+ S L+ RT E I +
Sbjct: 169 FGFIDDADISGCKALISRTGYTGEDGFEIYCRTDDAVHIWKQIIDAGEVYGLIPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+S + RK
Sbjct: 229 DTLRFEAKLPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
+ +P G + + +G + LA+ A + G +
Sbjct: 286 VGLEMTEKGIPRHGYEVFHNGKSVGKVTTGTQSPTLGKNVGLALI----AAEASEIGTVV 341
Query: 258 TVH 260
V
Sbjct: 342 EVE 344
>gi|222478769|ref|YP_002565006.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
gi|222451671|gb|ACM55936.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
Length = 386
Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/328 (16%), Positives = 104/328 (31%), Gaps = 77/328 (23%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ + G+ + F+ ++ + + +L PQG I + +E ++
Sbjct: 48 YGVLAITGEDRVEFIDNAVSNRIPE-ADGQGVYALLLDPQGGIETDMYVYNADE-RLLVF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VII-EIQPINGVVLSWNQEHTFSNSSFID--------- 117
+ + +++ + K+ V I +I GV + T +S +
Sbjct: 106 LPPERTEAVAEDWA-SKVFIQDVTIDDISDELGVFGVHGPKSTEKVASVLGGPGAPEKPL 164
Query: 118 --ERFSIADVLLHRTWGHNEK---------IASDIK-------------------TYHEL 147
R S+ D + A D + T+ L
Sbjct: 165 SFVRGSMVDAGVTVIASDAPLGEEGYEVVCAAEDAEEVLDTLLNRGLNAAPFGYRTWDAL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G ++ P ++ L N + KGCY+GQEVVSR++++ +R + +
Sbjct: 225 SLEAGTP--LFEYELEGTVP--NVLGLRNALDFEKGCYVGQEVVSRVENQGRPSRRLIGL 280
Query: 208 TGTD-------------------DLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
LP G+ + D +G + ALA A
Sbjct: 281 DLDGLADATADIDGDADPEGYDEILPSPGAAVFDGDEAVGEVTRAAVGPAAGDPIALAFA 340
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPH 270
R D A + V G V A+
Sbjct: 341 RFD----ADLVDPTVRVDGEEVAATRSD 364
>gi|15615379|ref|NP_243682.1| glycine cleavage system aminomethyltransferase T [Bacillus
halodurans C-125]
gi|11132403|sp|Q9K934|GCST_BACHD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|10175437|dbj|BAB06535.1| aminomethyltransferase [Bacillus halodurans C-125]
Length = 365
Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 52/290 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A+ +LQ ++T DV + A+ +A+ G + LI + ED ++
Sbjct: 52 SHMGEVEVTGAQALNYLQRLVTNDVSKIKDGQAQYTAMCYENGGTVDDLLIYRRSEDQYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFSNSSFIDERF 120
L I+ + D I + + + V I L+ T + D +F
Sbjct: 112 LVINAANIDKDIAWMEKHAI-DGVSITNVSNQTAQLALQGPVAENVLQTLTEEPLADIKF 170
Query: 121 ---------SIADVLLHRTWGHNEK------IASDIK-TY-------------------- 144
+ +VLL RT E +A D +
Sbjct: 171 FRFVDGVNIAGVNVLLSRTGYTGEDGFELYCLAEDAPVLWKKLIEAGKEHGVVPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P +A + + + K +IG+E++ + + + RK
Sbjct: 231 DTLRFEAKLPLYGQELTKD-ISPIEAGIGF--AVKVDKEDFIGKEILKKQKEQGAPRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248
+ +P +G + D+ +IG + LA+ + + +
Sbjct: 288 GLEMVDKGIPRTGYEVYVDNQKIGFVTTGTQSPTLKKNVGLALLQAEHSE 337
>gi|254446453|ref|ZP_05059929.1| Glycine cleavage T-protein C-terminal barrel domain
[Verrucomicrobiae bacterium DG1235]
gi|198260761|gb|EDY85069.1| Glycine cleavage T-protein C-terminal barrel domain
[Verrucomicrobiae bacterium DG1235]
Length = 278
Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 54/267 (20%)
Query: 37 KIARGSAILTPQGKILLYFLISKIEEDTFIL---EI-DRSKRDSLIDKLLFYKL------ 86
L +GK+L + + + +++ + +++ + L L+ ++
Sbjct: 4 GDVVYGLWLDRKGKVLADSFVLRRGPEDYLVVSVDCGEKTIFERLDAYLIMEEVELSGSS 63
Query: 87 ---RS--------------NVIIEI------QPINGVVLSWNQEHTFSNSSFID------ 117
R+ V IE+ NG++ W + + F+
Sbjct: 64 DGARAICILGESPQVAACEKVGIEMPLADRFTESNGLIAFWGKRGSEGALEFLALTEEGR 123
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
+R I D L R G E D + L I + + F S P + ++ +
Sbjct: 124 DRIEIVDAGL-RDIGSEEL---DREAMSFLAIEAKVPEIGLGFGDSD-LPQELGLER-DA 177
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTDDLPPSGSPI---LTDDIEIGTLG- 231
+S KGCY+GQEV++R+ +RKR + I+ G + + P PI G L
Sbjct: 178 VSFNKGCYLGQEVMARLHAMGRVRKRLVRISIEGPNTIAPGDLPIDLLDAAGKRQGQLRA 237
Query: 232 ---VVVGKKALAIARIDKVDHAIKKGM 255
G L I +++ G
Sbjct: 238 MAYSKSGGMGLGIVSSGFSGDSLQAGT 264
>gi|167815348|ref|ZP_02447028.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 91]
Length = 178
Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 6/145 (4%)
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
+ +I R D L ++++ + + L + G +
Sbjct: 2 PDAAGRARYLWIATRAEF-DARLPALEAALPRVSAAVWDW--LDVRAGEPRITQPAV-EQ 57
Query: 165 IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILT 222
P D++ G++ KGCY GQEVV+R Q+R I++R + D +G +
Sbjct: 58 FVPQMVNFDVIGGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAAGTDAAHAGVELYH 117
Query: 223 DDIEIGTLGVVVGKKALAIARIDKV 247
D G++V A +D +
Sbjct: 118 SDDPGQPCGMIVNAAAAPEGGVDAL 142
>gi|126653952|ref|ZP_01725791.1| aminomethyltransferase [Bacillus sp. B14905]
gi|126589555|gb|EAZ83696.1| aminomethyltransferase [Bacillus sp. B14905]
Length = 367
Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 53/309 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ +D ++
Sbjct: 53 SHMGEILVTGPDALDFLQNLLSNDVSKIATGQAQYTAMCYEDGGVVDDLLTYKLADDHYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-------------------------V 101
L ++ + + D +L + + +V I+ Q
Sbjct: 113 LCVNAANIEKDYDWMLENQHQYDVTIDNQSEAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144
+ + + + R +G E I + +
Sbjct: 173 FRFQENVEVAGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILDAGQDKGVVPAGLGCR 232
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G+ + +TI P +A + + L K +IG + + + + RK
Sbjct: 233 DTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEDFIGHDALVAQKENGLPRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
I +P G + D EIG + A+ ID I + +
Sbjct: 290 GIEMIDKGIPRHGYKVFKDGQEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGNELEIE 347
Query: 259 VHGVRVKAS 267
+ G ++K
Sbjct: 348 IRGKQLKVI 356
>gi|88801262|ref|ZP_01116796.1| hypothetical protein MED297_00205 [Reinekea sp. MED297]
gi|88775999|gb|EAR07240.1| hypothetical protein MED297_00205 [Reinekea sp. MED297]
Length = 254
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 35/218 (16%)
Query: 56 LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
I I+ L+ ++ + I +L Y + S I LS Q + ++ F
Sbjct: 6 RIFHIDNGYGYLQ-RQTVMATQIPELKKYAVFSKTDINQSTDVIFGLSGEQAQSAIDNYF 64
Query: 116 I---DERFSIAD---------VLLHRTWGHNEKIA---------SDIKTYHELRINHGIV 154
D R + + H E +A +D ++ I +
Sbjct: 65 TGSDDVRHNDTATAVKVDNLRWFIITPMEHAEAVAQHFAANATLTDTALWNLYDIKAVLP 124
Query: 155 --DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ T+ P + +NGIS KGCY GQE V+R ++R I ++ I++G
Sbjct: 125 RVEAATEL---EFIPQAMNLQAVNGISFKKGCYTGQETVARAKYRGINKRAMYIVSGEST 181
Query: 213 L-PPSGSP----ILTDDIEIGTLGVVV---GKKALAIA 242
P +G + + + GT+ ++ALA+
Sbjct: 182 QCPQAGDALERSVGENWRKGGTVITGYQFNDQQALALV 219
>gi|78042904|ref|YP_359347.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|123576895|sp|Q3AET7|GCST_CARHZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|77995019|gb|ABB13918.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 360
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 48/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+ +IT DV L + + P G + L K + ++
Sbjct: 52 SHMGEIEITGKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
L ++ + +D + +L Y+ +V + ++
Sbjct: 112 LVVNAANKDKDLAHILQYR-WDDVTVTDLSDETAEIALQGPRAQEILQKLTAFDLNQIKY 170
Query: 113 SSFIDERFSIADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
F + + L+ RT E + + LR
Sbjct: 171 FGFAEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELLNLGVKPAGLGARDTLRF 230
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ + + I P +A + + K +IG+E + ++ + RK +
Sbjct: 231 EACLPLYGHEL-SAEITPLEAGLGW--AVKFNKEDFIGKEALLAQKNAGLKRKIVGLEMI 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G I+ + +G + A+A+ ++ + + + + GVR
Sbjct: 288 GAGIPRQGYEIVFNQRGVGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKGVR 347
Query: 264 VKA-SFP 269
+ S P
Sbjct: 348 ARVISRP 354
>gi|167836301|ref|ZP_02463184.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia thailandensis MSMB43]
Length = 160
Score = 91.8 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 12/134 (8%)
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+D R + L R + L + G + P D++
Sbjct: 1 LDARLPALENALPRV---------SAAVWDWLDVRAGEPRITQPAV-EQFVPQMVNFDVI 50
Query: 176 NGISLTKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
G++ KGCY GQEVV+R Q+R I++R + D +G + D G++
Sbjct: 51 GGVNFRKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDAARAGVELYHSDDPGQPCGMI 110
Query: 234 VGKKALAIARIDKV 247
V A +D +
Sbjct: 111 VNAAAAPEGGVDAL 124
>gi|221632760|ref|YP_002521982.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
gi|221155637|gb|ACM04764.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
Length = 375
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 109/311 (35%), Gaps = 53/311 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DT 64
L + + V G A FLQ + DV L A+ S +L P G ++ +I + + +
Sbjct: 50 LGHMGQVVVRGSDAQAFLQWLTPNDVAALRPGRAQYSMLLYPHGGVVDDIMIYRRPDREE 109
Query: 65 FILEIDRSKRDSLIDKLLFY---KLRSNVIIE---------------------------- 93
+++ ++ + + + LL + ++ V IE
Sbjct: 110 YLVVVNAANTEKDVAWLLEHRAERVEWRVEIEDVSASTGMLALQGPRSEAILQRLTPADL 169
Query: 94 --IQPINGVVLSWNQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASD 140
+Q + +V + T + F + L + +
Sbjct: 170 SAVQSFDAIVSTVAGVPTLIARTGYTGEDGFELYFPIDHVGDLWDRLLEAGESDGIVPVG 229
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ + + + I P +A + + + KG +IG+E + R +
Sbjct: 230 LGARDTLRLEACLPLYGNEL-SAEITPLEAGLGWV--VKFDKGPFIGREALERQRQEGPP 286
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255
R+ + +P +G + + +G + K + +A +D+ I + +
Sbjct: 287 RRLVGFELVERGGIPRTGYEVRQEGERVGYVTSGTNSPTFGKPIGLALVDRRAAGIGREL 346
Query: 256 ALTVHGVRVKA 266
++ + G V+A
Sbjct: 347 SVVIRGRDVRA 357
>gi|254581046|ref|XP_002496508.1| ZYRO0D01738p [Zygosaccharomyces rouxii]
gi|238939400|emb|CAR27575.1| ZYRO0D01738p [Zygosaccharomyces rouxii]
Length = 451
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 61/171 (35%), Gaps = 39/171 (22%)
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRN 198
D + LR G VD D+ ++ P + D L N +S KGCYIGQE+ +R
Sbjct: 273 DPAFFRRLRFEQGYVDSVQDYTAESLLPLELNFDFLPNAVSADKGCYIGQELTARTFATG 332
Query: 199 IIRKRPMIITGTDD------------------------LPPSGSPILTDDI------EIG 228
I+RKR + +T + P + S + G
Sbjct: 333 ILRKRLVPVTLFNPENYPLPQGKQYPDISMEPDPNETRKPSANSNPFGNTKTPKRQRPAG 392
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMA------LTVHGVRVKA--SFPHW 271
+L G K +A+ RI+ A T G R+ S P W
Sbjct: 393 SLIASEGNKGVAMLRIEHFKRAFHSEEDDKPFYIATEDGKRIGIIPSQPFW 443
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 55/187 (29%)
Query: 10 SFIKVCGKSAIPFLQAIITA---------DVLTLPYKI---------------------- 38
SF+K+ G A FL ++T+ ++ T+
Sbjct: 23 SFLKIRGPEAPKFLNGLVTSKLLPAFTKKNLTTINPHQEDKNNQLELDFDETHSNWGVFN 82
Query: 39 ------------ARGSAILTPQGKILLYFLISKIEE----------DTFILEIDRSKRDS 76
+ IL +G++L L+ ++LE D S +
Sbjct: 83 EMGYNGSYISRFGTYTGILNSKGRLLTDTLLYPSPLCHGTKKSMAWPEYLLEFDPSIGST 142
Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136
L L + L S V ++ G SW+ DE I++VL T N +
Sbjct: 143 LNKMLDLHVLTSKVKTKLY--EGGFTSWDMRILLPGLQAEDENPWISNVLEPSTMTKNPQ 200
Query: 137 IASDIKT 143
A
Sbjct: 201 DAQAFAA 207
>gi|299537719|ref|ZP_07051008.1| aminomethyltransferase [Lysinibacillus fusiformis ZC1]
gi|298726698|gb|EFI67284.1| aminomethyltransferase [Lysinibacillus fusiformis ZC1]
Length = 367
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FLQ +++ DV + A+ +A+ G ++ L K+ ++ ++
Sbjct: 53 SHMGEILVTGPDALGFLQNLLSNDVSKIVDGQAQYTAMCYEDGGVVDDLLTYKLADNHYL 112
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + + ++ L F
Sbjct: 113 LCVNAANIEKDYDWMMENQHQYDVTIDNQSDAYAQIALQGPLAEEVLQSLTSTDVSAIKF 172
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
++ + NV + + + E F ++ ++ +L + + +
Sbjct: 173 FRFQENVEVAGHKVLVSRSGYTGEDGFELYGAPEDIKALWGKILE-AGQEKGVVPAGLGC 231
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G+ + +TI P +A + + L K +IG E + + + RK
Sbjct: 232 RDTLRFEAGLPLYGQEL-SATISPLEAGIGF--AVKLNKEGFIGHEALVAQKENGLPRKL 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + D EIG + A+ ID I + +
Sbjct: 289 VGIEMVDKGIPRHGYKVFKDGQEIGEVTTGTQLPSSKRNVGHAL--IDSQFATIGTELEI 346
Query: 258 TVHGVRVKAS 267
+ G +K
Sbjct: 347 EIRGKHLKVI 356
>gi|313902420|ref|ZP_07835823.1| aminomethyltransferase [Thermaerobacter subterraneus DSM 13965]
gi|313467351|gb|EFR62862.1| aminomethyltransferase [Thermaerobacter subterraneus DSM 13965]
Length = 372
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 112/305 (36%), Gaps = 46/305 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A LQ ++T DV L A + + TP+G I+ L+ ++ E ++
Sbjct: 59 SHMGEIEISGPGARQALQRLVTNDVERLAPGRALYTVMCTPEGGIVDDLLVYQVAEQRYM 118
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
L ++ + S +D + + V + + + +++ + +
Sbjct: 119 LVVNAANTASDLDWVREHVAGPEVTVADRSLETALIALQGPRAQAILARVTDGIDLESLR 178
Query: 115 -------------------------FIDERFSIADVLLHRTWGHNEK-IASDIKTYHELR 148
F+ + A G +E + + + LR
Sbjct: 179 PFHFVGGWEGMISRTGYTGEDGFEIFLSWEGAPAIWRGILAAGQDEGLVPAGLGARDTLR 238
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ + T P +A +D + + KG +IG+E + R + + + +K +
Sbjct: 239 FEACLPLYGQELDRDTS-PLEAGLDFV--VKWDKGPFIGREALLRQREQGLRKKLVGLRL 295
Query: 209 GTDDLPPSGSPILTD-DIEIGTL--GVVVGKKA--LAIARIDKVDHAIKKGMALTVHGVR 263
+ +G P+L D E+G + G V LA+A + + +A+ + G
Sbjct: 296 LEPGVARTGYPVLDDEGREVGRVTSGTVAPTLGASLALAYVPPSLAVPGRRLAVGIRGRA 355
Query: 264 VKASF 268
V A
Sbjct: 356 VAAQV 360
>gi|46199771|ref|YP_005438.1| aminomethyltransferase [Thermus thermophilus HB27]
gi|55981790|ref|YP_145087.1| hypothetical protein TTHA1821 [Thermus thermophilus HB8]
gi|46197398|gb|AAS81811.1| aminomethyltransferase [Thermus thermophilus HB27]
gi|55773203|dbj|BAD71644.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 261
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 77/238 (32%), Gaps = 37/238 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ + G A FLQ T D+ L L +G+I + E L
Sbjct: 22 GVLLLRGPDAFSFLQGQGTRDLRRLSGPSGVL--FLNHKGQIEEAATLFPHPEG--FLLA 77
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ L +L Y + V + P+ ++ + +E
Sbjct: 78 PWGSLEGLERRLRRYIVFDQVELVALPLFRLLHADGREEV-------------------- 117
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
G + A + Y + G+ + P + L+ + KGCY+GQE
Sbjct: 118 --GERAEGALPAELYPLYTLLKGLPLLSD---IQGELPQSVGL--LHLVDYGKGCYVGQE 170
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT----LGVVVGKKALAIAR 243
+++R + + + + + P+ + + +G L G LA+ R
Sbjct: 171 IMARTEGKEVPYRLVGLRALEGGEAPAA--LTLEGKRVGEAKRLLETPFGLLGLAVVR 226
>gi|167738162|ref|ZP_02410936.1| Glycine cleavage T-protein (aminomethyl transferase) family protein
[Burkholderia pseudomallei 14]
Length = 172
Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
D + ++++ + + L + G + P D++ G++ KG
Sbjct: 14 DARVPALEAALPRVSAAVWDW--LDVRAGEPRITQPAV-EQFVPQMVNFDVIGGVNFRKG 70
Query: 184 CYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
CY GQEVV+R Q+R I++R + D +G + D G++V A
Sbjct: 71 CYPGQEVVARSQYRGTIKRRTALAHVAAGTDAAHAGVELYHSDDPGQPCGMIVNAAAAPE 130
Query: 242 ARIDKV 247
+D +
Sbjct: 131 GGVDAL 136
>gi|295695377|ref|YP_003588615.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912]
gi|295410979|gb|ADG05471.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912]
Length = 376
Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 102/300 (34%), Gaps = 56/300 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G + PFLQ ++T +V L A + + P G + L+ +++ D ++
Sbjct: 50 SHMGEFEISGSESTPFLQRMVTGNVAALSPGRAMYTMMCLPSGGTVDDLLVYRLDADRYM 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105
L ++ + + L ++L V I + +L+
Sbjct: 110 LVVNAANTAKDLTWLQEHRLP-GVEIADRTEETALLALQGPAAVEILRAAKGDGENLKPF 168
Query: 106 --------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
E F D + D LL G I + +
Sbjct: 169 RVEVGSVAGVQGLISRTGYTGEDGFELYVPADRGLELWDRLLE-IGGPMGLIPAGLGARD 227
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + + I P +A ++ + G +IG++ + + R + R+
Sbjct: 228 TLRLEAALPLYGHELT-EEITPLEAGLEAF--VKWDAGDFIGRDALLSQRERGVTRRLAG 284
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTV 259
++ +P SG + + EIG + V LA+ + + G AL V
Sbjct: 285 LVMVDRGIPRSGYAVKSRGREIGWVTSGSFGPTVQRNIGLAMVEEEFA----RPGQALEV 340
>gi|154686720|ref|YP_001421881.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens FZB42]
gi|166989724|sp|A7Z6M4|GCST_BACA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|154352571|gb|ABS74650.1| GcvT [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/316 (18%), Positives = 106/316 (33%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V GK A+ FLQ ++T DV L A +A+ P G + LI + E ++
Sbjct: 50 SHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCYPDGGTVDDLLIYQKSESCYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112
L I+ S + I L + +V + Q +L+ +
Sbjct: 110 LVINASNIEKDIAWLTEH-TEGDVTLTNQSDGISLLAVQGPNAQSVLAKLTECDLSSLKP 168
Query: 113 SSFIDERF-SIADVLLHRTWGHNEK---------------------------IASDIKTY 144
+FID+ + VLL RT E + +
Sbjct: 169 FTFIDKADVAGRQVLLSRTGYTGEDGFELYCRNEDAVHLFKEILAAGEHEGLVPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ V+ + + RK
Sbjct: 229 DTLRFEAKLALYGQELTKD-ITPIEAGIGF--AVKHKKDSDFFGKSVLREQKEKGAPRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
+ +P G + D + IG + LA+ + + + + + +
Sbjct: 286 VGLEMIEKGIPRHGYAVKKDGVPIGEVTTGTQSPTLKKNIGLALIKTEFSEVGTEVEVEI 345
Query: 258 TVHGVRVKASFPHWYK 273
V+ K +YK
Sbjct: 346 RKKTVKAKIVRTPFYK 361
>gi|167619726|ref|ZP_02388357.1| Glycine cleavage T-protein (aminomethyl transferase) superfamily
[Burkholderia thailandensis Bt4]
Length = 174
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ D L ++++ + + L + G + P D++ G++
Sbjct: 13 AELDARLPALEAALPRVSAAVWDW--LDVRAGEPRVTLPAV-EQFVPQMVNFDVIGGVNF 69
Query: 181 TKGCYIGQEVVSRIQHRNIIRKR--PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
KGCY GQEVV+R Q+R I++R + D +G + D G++V A
Sbjct: 70 RKGCYPGQEVVARSQYRGTIKRRTALAHVAVGTDAAHAGVELYHSDDPGQPCGMIVNAAA 129
Query: 239 LAIARIDKVDH----AIKKGMA-LTVHGVRVKASFP 269
+D + A++ G L G P
Sbjct: 130 APEGGVDALVEIKLAALESGSVHLASAGGPALTFLP 165
>gi|288920191|ref|ZP_06414507.1| folate-binding protein YgfZ [Frankia sp. EUN1f]
gi|288348441|gb|EFC82702.1| folate-binding protein YgfZ [Frankia sp. EUN1f]
Length = 415
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/320 (14%), Positives = 102/320 (31%), Gaps = 80/320 (25%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF------ 55
+ V SN+ +++ G + +L ++ + + L + +L+P G + +
Sbjct: 52 ALVDRSNREVVRITGADRLTWLHSVTSQHLSQLAPMHGTEALVLSPHGHVEHHLVLADDG 111
Query: 56 --------------LISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN------------ 89
L++ ++ F++ ++ + + L R++
Sbjct: 112 IATWIDVEPTTAPRLLAFLQSMRFLMRVEPVDVTAEVAVLSLTGPRADEVAAAVFGPAAL 171
Query: 90 -----------------------VIIEIQPINGVVLSWNQEHTFSNSSFIDE---RFSI- 122
V P++ + Q S+ R +
Sbjct: 172 PAPLAGTGTGGATGAVPRTSAGVVTSGPYPVSHAAPAGTQAAPDEQSAPDAPAGGRLPLI 231
Query: 123 ------ADVLLHRT--------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
D+L+ R+ + + RI N + PH
Sbjct: 232 RRMPHGLDLLVARSDLAATADRLTSAGAALIGLSAFEAQRIASRQPRLNRE-TDHRTIPH 290
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+ L + + L KGCY GQE V+R+ + +R +++ + G P+ +G
Sbjct: 291 EVGW-LASAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAQGCPVTAAGRTVG 349
Query: 229 TLGVV-----VGKKALAIAR 243
+G +G ALA+ +
Sbjct: 350 FVGSSEMHHELGPIALAVVK 369
>gi|62738815|pdb|1YX2|A Chain A, Crystal Structure Of The Probable Aminomethyltransferase
From Bacillus Subtilis
gi|62738816|pdb|1YX2|B Chain B, Crystal Structure Of The Probable Aminomethyltransferase
From Bacillus Subtilis
Length = 365
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 89/285 (31%), Gaps = 53/285 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ + T DV L A+ +A P G + LI + E+ ++
Sbjct: 53 SHXGEVEVSGNDSLSFLQRLXTNDVSALTPGRAQYTAXCYPDGGTVDDLLIYQKGENRYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L I+ S D + + +V I+ Q +L+
Sbjct: 113 LVINASNIDKDLAWXKEHAA-GDVQIDNQSDQIALLAVQGPKAEAILKNLTDADVSALKP 171
Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144
+FIDE R A + + + I +
Sbjct: 172 FAFIDEADISGRKALISRTGYTGEDGYEIYCRSDDAXHIWKKIIDAGDAYGLIPCGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR I + I P +A + + K + G+ V+S + RK
Sbjct: 232 DTLRFEANIPLYGQELTRD-ITPIEAGIGF--AVKHKKESDFFGKSVLSEQKENGAKRKL 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
+ +P G + + +G + LA+
Sbjct: 289 VGLEXIEKGIPRHGYEVFQNGKSVGKVTTGTQSPTLGKNVGLALI 333
>gi|226311884|ref|YP_002771778.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599]
gi|226094832|dbj|BAH43274.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599]
Length = 367
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G++A+ +LQ + T DV L A+ S + P G + L+ K +D ++
Sbjct: 52 SHMGEVDVKGENALTYLQRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKLL--------FY 84
L I+ +S++ KL F+
Sbjct: 112 LVINAGNIDKDYAWLEEHLIPGVTIENISPQTAQIAIQGPLAESILQKLTTTDLSQIGFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ +V + P + E F D + D+LL + +
Sbjct: 172 RFERDVQVSGIPGLVSRTGYTGEDGFEIYLDADRAAELWDILL-DAGKEEGLLPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + + K +IGQEV+ + RK
Sbjct: 231 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKVDKEVPFIGQEVLKAQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P + P+ + IG + LA+ + + + +
Sbjct: 288 VGIEMIDRGIPRTHYPVYVGEELIGEVTTGTQSPTLKKNVGLALVKTEHAAIGTPVEVEI 347
Query: 258 TVHGVRVKASFPHWYK 273
++ + +YK
Sbjct: 348 RGKRLKAEVVAAPFYK 363
>gi|288553360|ref|YP_003425295.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
gi|288544520|gb|ADC48403.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
Length = 365
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/318 (16%), Positives = 112/318 (35%), Gaps = 57/318 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G +A+ +LQ ++T DV L A+ +A+ P G + LI + ED ++
Sbjct: 52 SHMGEVEVKGDNALAYLQKMMTNDVSKLVDNQAQYTAMCYPNGGTVDDLLIYRKSEDDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV------------------------IIEIQPINGV-V 101
L I+ S D +D L +K+ + V + Q ++ +
Sbjct: 112 LVINASNIDKDMDWLNQHKI-AGVEVNNISDDIAQLAIQGPIAEEILQTLTDQDLSDIRF 170
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144
+ + S + R + E+ A +
Sbjct: 171 FRFQDDVDLSGIKALVSRTGYTGEDGFEIYLQAEQAAELWSRLLETGSSKGLVPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNIIR 201
LR + + S I P +A + G ++ G +IG++ + + + + R
Sbjct: 231 DTLRFEAKLPLYGQELT-SEISPLEAGI----GFAVKVGKEEDFIGKDALKKQKEEGLKR 285
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGM 255
K + +P +G +L +D +IG + LA+ + + + +
Sbjct: 286 KLVGLEMVDKGIPRTGYEVLANDKQIGFVTTGTQSPTLKKNVGLAVIDSEYTEAGTEVYV 345
Query: 256 ALTVHGVRVKASFPHWYK 273
+ ++ +YK
Sbjct: 346 QVRKKTLKAMVVKTPFYK 363
>gi|315605231|ref|ZP_07880277.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313048|gb|EFU61119.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 387
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 46/271 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + I V G +L ++ + + + +R IL+P+G+I + S E T +
Sbjct: 43 PDLAVIDVGGADRATWLTSLASQVLTGMAPGDSRELLILSPEGRIEHWAGASDDGETTHL 102
Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS---------- 114
+ ++RS DS ++ L + LR +V + + V + +++
Sbjct: 103 I-VERSDADSFVEFLESMRFALRVSVGVRDAVVFSSVRAGANTADAASALPGIEWTWEDP 161
Query: 115 -----------FIDERFSIADVLL--HRTWGHNEKIASDIK---------------TYHE 146
F ER A + H D +
Sbjct: 162 WPGVAEGGAAYFQGERHPGARTPMMYHVASPEGAASFEDAWLGVTEGGSRRRAGILAWEA 221
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+RI + + + P + L + KGCY GQE ++R+ + +R
Sbjct: 222 MRIAAWKPRLGRE-VDARTIPAEVDW-LRTAVHTDKGCYRGQETIARVINLGRPPRRLTY 279
Query: 207 ITGTD---DLPPSGSPILTDDIEIGTLGVVV 234
+ DLP G+PI ++G +
Sbjct: 280 LQLDGLRADLPAPGTPIEVGGRQVGVITSAA 310
>gi|167461342|ref|ZP_02326431.1| glycine cleavage system aminomethyltransferase T [Paenibacillus
larvae subsp. larvae BRL-230010]
gi|322383986|ref|ZP_08057716.1| glycine cleavage system aminomethyltransferase T-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321151463|gb|EFX44650.1| glycine cleavage system aminomethyltransferase T-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 368
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G ++ FLQ + T D+ + + + + P G ++ LI ++ E ++
Sbjct: 50 SHMGEVFVSGPDSLSFLQHLTTNDLSKIQDGQCQYTLMCYPDGGVVDDLLIYRLSEHKYM 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105
I+ S + ++ + + +S V ++ +L+
Sbjct: 110 AVINASNIEKDLEWIQQHN-KSGVKLDNVSDRTALLALQGPLAETVLMKLVEPGQHEKIR 168
Query: 106 --------QEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASD 140
Q+ S I R + + I +
Sbjct: 169 ELKPFRFVQDVAVSGKRAILSRTGYTGEDGFELYVESGDAVYLWNELLRVGEPEGLIPAG 228
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR + + + I P +A + + L KG +IG++ +S + + +
Sbjct: 229 LGARDTLRFEARLPLYGQEL-SADISPLEAGLSFF--VKLDKGDFIGRKALSLQKEQGVP 285
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256
RK + +P S P+ D +IG + L +A ID A+ +
Sbjct: 286 RKLAGVELLERGIPRSHYPVYADGKQIGEITTGTQSPTLKKSVGLALIDSAYSALDTELY 345
Query: 257 LTVHGVRVKASF 268
+ + G ++KA
Sbjct: 346 VEIRGRQIKAKV 357
>gi|260435667|ref|ZP_05789637.1| glycine cleavage T-protein [Synechococcus sp. WH 8109]
gi|260413541|gb|EEX06837.1| glycine cleavage T-protein [Synechococcus sp. WH 8109]
Length = 264
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 98/265 (36%), Gaps = 26/265 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIEEDTFILEI 69
+++ G A FLQ +AD+ L + LT G++ D +L
Sbjct: 13 LRLNGSGARQFLQGQTSADLNALQSGDFLQTCWLTATGRLRAVLELRFDAEGADVIVLAG 72
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ S + D+++F R + +QP+ G + + + + D D L
Sbjct: 73 EASAIHAGFDQVIFPADR----VRLQPL-GQLRRLQWLEPMAATVWCDP-----DAALPE 122
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
W E A+ + R+ G + P + + +S KGCY+GQE
Sbjct: 123 PWASGE--AATATALEQWRLQSGFPPGPGEL-NGETNPLELGLVAQ--VSTKKGCYLGQE 177
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245
++++ + ++++ + L + + + D G + + + LA+ R
Sbjct: 178 TMAKLIGQAGVKQQLRCWSCPSPLAAA-TKLTLDGERAGVITSALERDGTWLGLALVRRQ 236
Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270
+ +G +G +++ P
Sbjct: 237 CLASPTLEGP----NGEQLQIRQPE 257
>gi|288572847|ref|ZP_06391204.1| glycine cleavage system T protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568588|gb|EFC90145.1| glycine cleavage system T protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 364
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 52/308 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A F+Q++++ D+ + + + + P+G ++ L+ K+ D F+L ++ S
Sbjct: 56 ITGPDAFSFVQSLVSNDISVMCDGQVQYNMMCYPEGGVVDDLLVYKVSNDRFLLVVNASN 115
Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID------------ERF 120
D + + + L +V E P V + +D E
Sbjct: 116 VDKDFEWVKSH-LSGDVKAENASPSTAEVALQGPLAQEILQTIVDVDLSDIGFFFFRENV 174
Query: 121 SIADV--LLHRTWGHNEKIASDIKTYHE---------------------------LRINH 151
S+A V L+ RT E + E LR
Sbjct: 175 SVAGVKALVSRTGYTGEDGFEVYVDWEEGSKVWNAIMEAGKTFGILPIGLGARDSLRFEA 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ + I P +A + + L +IG E + +++ + RK +
Sbjct: 235 CLPLYGHEI-DRDITPLEAGLGFF--VKLDSSDFIGSEALRKMKAEGLPRKTVALKMVDK 291
Query: 212 DLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G P+ D E+G + ALA+ + K + + +
Sbjct: 292 GVPRHGYPVSVDGREVGHVTTGGYSPTLEENIALALVEASSAEVGGKMNVVIRGKDKAAE 351
Query: 266 ASFPHWYK 273
+Y+
Sbjct: 352 VVKKPFYR 359
>gi|213419535|ref|ZP_03352601.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 228
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 34/170 (20%)
Query: 82 LFYKLRSNVIIEIQPINGVV------------------------LSWNQEHTFSNSSFID 117
Y + S V+I ++ + + T
Sbjct: 1 KKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPA 60
Query: 118 ERF------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
ERF + A++L + G E ++ + + L I GI + P
Sbjct: 61 ERFLLVTDVATANMLTEKLHGEAE--LNNSQQWLALDIEAGIPVIDA-ANSGQFIPQATN 117
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPI 220
+ L GIS KGCY GQE+V+R + R ++ ++ G +P +G +
Sbjct: 118 LQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDL 167
>gi|227497040|ref|ZP_03927291.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces
urogenitalis DSM 15434]
gi|226833481|gb|EEH65864.1| glycine cleavage T protein (aminomethyl transferase) [Actinomyces
urogenitalis DSM 15434]
Length = 422
Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 64/307 (20%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67
+ I V G + +L + + + L + +L QG I L + + +T L
Sbjct: 53 RDVIAVSGPDRLSWLTTLSSQVLTGLAPGDGGAEALLLDAQGHITH-ALAAVDDGETLFL 111
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTFSNSSFID 117
L D L + V + + V+ + ++ +++ D
Sbjct: 112 VTQAGDGPVLADFLDSMRFMLAVQVCEREELAVLGAHASGLAALETAAEQAGAGIATWHD 171
Query: 118 E----------------------RFSIADVLLHRTWGHNEKI-------------ASDIK 142
R +++ + +
Sbjct: 172 PWPGVVPGGTSYDVGLGSQDHPYRHPGELYRAGYVIVAADQVRALVTGLAEQGLRPAGVL 231
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIR 201
+ LR+ G + + + PH+ +D L + LTKGC+ GQE ++R +
Sbjct: 232 AWEALRVEAGRPRWARE-VDARAIPHE--LDWLRTAVHLTKGCFPGQETIARTLNLGRPP 288
Query: 202 KRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253
+R I+ +LP G +L + +G + VV G ALA+ R A+
Sbjct: 289 RRLTILQLDGLSGELPSPGDRVLMGERAVGAVTSVVRHHDYGPMALALLR-----RAVPV 343
Query: 254 GMALTVH 260
ALTV
Sbjct: 344 EAALTVE 350
>gi|269837316|ref|YP_003319544.1| glycine cleavage system T protein [Sphaerobacter thermophilus DSM
20745]
gi|269786579|gb|ACZ38722.1| glycine cleavage system T protein [Sphaerobacter thermophilus DSM
20745]
Length = 371
Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 106/313 (33%), Gaps = 57/313 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-KIEEDT 64
L + ++V G A FLQ + T DV L A+ S +L P G ++ L+ + ++
Sbjct: 51 LGHMGQVEVAGPDAQAFLQYVTTNDVTALAPGEAQYSLLLYPDGGVVDDILVYLRPSGES 110
Query: 65 FILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPIN------------------------- 98
+++ ++ + D + L + RS++ + + ++
Sbjct: 111 YLVVVNAANTDKDLAWLAEQREKRSDLDVTVTDLSPRLGMLAIQGPKAEEILQQVTSVNL 170
Query: 99 GVVLSWNQEHTFSNSSF------------------IDERFSIADVLLHRTWGHNEKIASD 140
G + ++ + E+ L R
Sbjct: 171 GEIAYFHAAEIDVDGVPCLVSRTGYTGEDGFEIYCPIEKTEQLWDRLLRVGEPMGLQPIG 230
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ + + + I P +A + + L KG +IG+E + + + +
Sbjct: 231 LGARDTLRLEARMPLYGNEI-SAEISPLEAGLGF--AVKLDKGDFIGREALQKQKAEGVK 287
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253
R+ + +P + + D +G + +AI D+ + K
Sbjct: 288 RRLVGFKLVERGGVPRTHYEVQVDGRTVGFVTSGTTSPTLGENIGMAIV--DREVAGVGK 345
Query: 254 GMALTVHGVRVKA 266
+ + + G V+A
Sbjct: 346 PLDIIIRGKPVRA 358
>gi|154283223|ref|XP_001542407.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410587|gb|EDN05975.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 162
Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 46/144 (31%)
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-------------------DLPP 215
+ GI KGCY GQE+ R HR ++RKR + + D LPP
Sbjct: 1 MGGIDFHKGCYTGQELTIRTHHRGVVRKRILPVQLYDIDETMPKTEIPYYSSESKLVLPP 60
Query: 216 SGSPIL----TDDIEIGTLGVVVGKKALAIARID----------------------KVDH 249
+G+ I G VG LA+ R++ +
Sbjct: 61 AGANIAKVSSKKGRSAGKFLSGVGNIGLALCRLEMMTDIVFTDESSQYGPDQEFKISWEA 120
Query: 250 AIKKGMALTVHGVRVKASFPHWYK 273
+ G+ T V+VKA P W +
Sbjct: 121 DPEAGVEKT-GEVKVKALVPPWMR 143
>gi|323347833|gb|EGA82095.1| Iba57p [Saccharomyces cerevisiae Lalvin QA23]
Length = 497
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273
G L G +A+ R + A + +++ P W +K
Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|207343770|gb|EDZ71127.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 241
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 61 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 120
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 121 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 178
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273
G L G +A+ R + A + +++ P W +K
Sbjct: 179 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 234
>gi|6322582|ref|NP_012656.1| Iba57p [Saccharomyces cerevisiae S288c]
gi|1352922|sp|P47158|CAF17_YEAST RecName: Full=Putative transferase CAF17, mitochondrial; AltName:
Full=57 kDa iron-sulfur cluster assembly factor for
biotin synthase- and aconitase-like mitochondrial
proteins; AltName: Full=CCR4-associated factor 17;
Flags: Precursor
gi|1015847|emb|CAA89653.1| CAF17 [Saccharomyces cerevisiae]
gi|151945187|gb|EDN63438.1| ccr4 associated factor [Saccharomyces cerevisiae YJM789]
gi|190409594|gb|EDV12859.1| hypothetical protein SCRG_03773 [Saccharomyces cerevisiae RM11-1a]
gi|256273115|gb|EEU08070.1| Iba57p [Saccharomyces cerevisiae JAY291]
gi|259147585|emb|CAY80836.1| Iba57p [Saccharomyces cerevisiae EC1118]
gi|285813009|tpg|DAA08907.1| TPA: Iba57p [Saccharomyces cerevisiae S288c]
Length = 497
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 49/176 (27%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273
G L G +A+ R + A + +++ P W +K
Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|152976624|ref|YP_001376141.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|189039312|sp|A7GSN8|GCST_BACCN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|152025376|gb|ABS23146.1| glycine cleavage system T protein [Bacillus cytotoxicus NVH 391-98]
Length = 366
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 110/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDTKVVNVSNEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++V+++ P + E F ++ I + LL + +
Sbjct: 172 KFKNDVLVDGIPALVSRTGYTGEDGFEIYCKSEDAIKIWEKLLE-VGEEDSLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+EV+ + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKEVLKEYKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID AI + + +
Sbjct: 288 VGIEVIERGIPRTHYPVYVGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAIDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RKKRVKAVV 356
>gi|78211782|ref|YP_380561.1| hypothetical protein Syncc9605_0230 [Synechococcus sp. CC9605]
gi|78196241|gb|ABB34006.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Length = 264
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 103/265 (38%), Gaps = 26/265 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIEEDTFILEI 69
+++ G A FLQ +AD+ L + LT G++ D +L
Sbjct: 13 LRLNGSGARQFLQGQTSADLNALQSGDLLQTCWLTATGRLRAVLELRFDAEGADVIVLAG 72
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ S + D+++F R + +QP+ + + N++ + + A+ L
Sbjct: 73 EASAVHAGFDQVIFPADR----VRLQPLAEL---RRLQWLEPNAAAV---WCDAEAELPE 122
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
W E A+ + + R+ G + P + + IS KGCY+GQE
Sbjct: 123 PWASGE--AATVMALEQWRLQSGFPPGPGEL-NGETNPLELGLVAQ--ISTEKGCYLGQE 177
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245
++++ + ++++ + + L P+ + + + G + + + LA+ R
Sbjct: 178 TMAKLIGQAGVKQQLRRWSCSSALSPT-AKLTLEGERAGVITSALERDGTWLGLALVRRQ 236
Query: 246 KVDHAIKKGMALTVHGVRVKASFPH 270
+ +G +G +++ P
Sbjct: 237 CLASPTLEGP----NGEQLQIRQPE 257
>gi|297570831|ref|YP_003696605.1| folate-binding protein YgfZ [Arcanobacterium haemolyticum DSM
20595]
gi|296931178|gb|ADH91986.1| folate-binding protein YgfZ [Arcanobacterium haemolyticum DSM
20595]
Length = 366
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 94/301 (31%), Gaps = 42/301 (13%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ L + ++V G L I + D + + +L + + + + +
Sbjct: 30 AFSLLDWDVVRVAGADCARLLHVISSRDFERVAPGTSTEMLVLDAN-GHVAHAAGAVVAD 88
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV--------------VLSWNQEH 108
D L DR +L+D ++ + V ++ V + W
Sbjct: 89 DAIWLLTDRGLGQALVDHIVKMRFMMRVEADVVDAVAVGALVDVPGSVCDVALAVWQDPW 148
Query: 109 TF-----SNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-------------YHELRIN 150
++ DE + S + + R+
Sbjct: 149 PVTAPGGAHYGVADEDHPAFGRTCFVAIAPRDAQDSVVSAFKAAGFAPAGKIAWEAARVA 208
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MIIT 208
+ + + PH+ L + KGCY GQE V+++ + +R + +
Sbjct: 209 DWRPSFSHEGAQG-VLPHEVDW-LRTAVHTAKGCYPGQETVAKLVNLGKPPRRLAFLYLE 266
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVHGVR 263
G ++LPP G + D G + V G ALA+ + + A+ V
Sbjct: 267 GGEELPPVGCEVTLDSRVAGVVTSVARSADDGPIALALLKRNVPADAVVTVGDFVASQVE 326
Query: 264 V 264
+
Sbjct: 327 I 327
>gi|320095432|ref|ZP_08027109.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977625|gb|EFW09291.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 400
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 91/284 (32%), Gaps = 53/284 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + + V G+ +L ++ T V + +R +L+P+G+I + S T +
Sbjct: 56 PDLAVVDVSGEDRQTWLTSLSTQVVTGMAPGDSRELLVLSPEGRIEHWAGASDDGTTTHL 115
Query: 67 L--EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------------- 103
+ +D +D + + LR V + ++ V S
Sbjct: 116 IAEGMDAGALAGFLDSM-RFALR--VRVSVRDDLAVYASVRAGGNDAAAVGSLPGVEWTW 172
Query: 104 ---WNQEHTFSNSSFIDERFS--------------IADVLLHRTWGHNEKIASDIKTYHE 146
W + + R +A + + + +
Sbjct: 173 EDPWPGVAPGGAAYYQGARHPGSRTPMMFHVVPRAMAGAFEGAWLEADGHRMAGMLAWEA 232
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+R+ D + P + L + KGCY GQE ++R+ + +R
Sbjct: 233 MRVAAWRPRLGAD-TDARSIPPEVDW-LRTAVHTDKGCYRGQETIARVVNLGRPPRRLAY 290
Query: 207 ITGTD---DLPPSGSPILTDDIEIGTLGVVV-----GKKALAIA 242
+ +LP G+ I +G + V G ALA+
Sbjct: 291 LQLDGSRSELPEPGTRIEVGGRTVGVVTSVARHADEGPVALALL 334
>gi|323154589|gb|EFZ40788.1| tRNA-modifying ygfZ domain protein [Escherichia coli EPECa14]
Length = 106
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + +A +GK+ + +
Sbjct: 19 LTLMTLDDWALATITGADSEKYMQGQVTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRD 78
Query: 61 EEDTFILEIDRSKRDSLIDKLL--FYKL 86
+ +E RS R+ + +L Y L
Sbjct: 79 GDGFAWIE-RRSVREPQLTELKNMRYSL 105
>gi|228992970|ref|ZP_04152894.1| Aminomethyltransferase [Bacillus pseudomycoides DSM 12442]
gi|228999019|ref|ZP_04158601.1| Aminomethyltransferase [Bacillus mycoides Rock3-17]
gi|229006567|ref|ZP_04164203.1| Aminomethyltransferase [Bacillus mycoides Rock1-4]
gi|228754706|gb|EEM04115.1| Aminomethyltransferase [Bacillus mycoides Rock1-4]
gi|228760636|gb|EEM09600.1| Aminomethyltransferase [Bacillus mycoides Rock3-17]
gi|228766827|gb|EEM15466.1| Aminomethyltransferase [Bacillus pseudomycoides DSM 12442]
Length = 366
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVTGTDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGNTKVVNVSSEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++V+++ P + E F E L + +
Sbjct: 172 KFKNDVLVDGTPALVSRTGYTGEDGFEIYC-KSEDAPKLWEKLLEAGAEDGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKETLKEYKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A +D A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVYVGEEKIGEVTSGTQSPTLKKSIGLALVDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|33864773|ref|NP_896332.1| hypothetical protein SYNW0237 [Synechococcus sp. WH 8102]
gi|33632296|emb|CAE06752.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 265
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 44/275 (16%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKIL-----------LYFLISK 59
+++ GK A FLQ TAD+ L + S LT G++ L+
Sbjct: 13 MLRLEGKGARDFLQGQTTADLSGLVDGELQQSCWLTATGRLRALLELRLDATGADVLVLA 72
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
+ + D+ + +L + + V Q ++ V L+
Sbjct: 73 GDAEAVSRGFDQVIFPADRVRLNASRRQRRV----QGLDPVGLAL--------------- 113
Query: 120 FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ D L + ++ +D R+ G + P + + IS
Sbjct: 114 WIGKDQPLPEELNASTQLEND--ALERHRLQQGFPPGPAEM-NGETNPLELGL--SGRIS 168
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK--- 236
L KGCY+GQE ++++ + ++++ L P G + GT+ +
Sbjct: 169 LDKGCYLGQETMAKLTGKGGVKQQLRCWHSEQPLHP-GDQLNVGSDRAGTITSALSHPGA 227
Query: 237 -KALAIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
LA+ R +D + +G G V+ P
Sbjct: 228 ALGLALVRRQFLDLSSVEGPT----GQTVQLGQPA 258
>gi|296120503|ref|YP_003628281.1| folate-binding protein YgfZ [Planctomyces limnophilus DSM 3776]
gi|296012843|gb|ADG66082.1| folate-binding protein YgfZ [Planctomyces limnophilus DSM 3776]
Length = 329
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 58/308 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ + FLQ T DV L +G+I+ + I + ED+ ++ I
Sbjct: 19 VRGQHRVRFLQNFCTNDVARLTSNTGVEVFFPNVKGRIVGHGWIHAL-EDSLVMTIGAGT 77
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--TFSNSSFIDERFSIADVLLHRTW 131
SL+ L Y + +V + L + ++ S +R A+ +
Sbjct: 78 GTSLLPHLERYIITEDVTFTKAALKDTWLVGGETANQLWAEISQQQQRDLAAESVHQMIA 137
Query: 132 GHNEKIA----------------------------------SDIKTYHELRINHGIVDPN 157
G + A + R + G+
Sbjct: 138 GVGWRAALMTGWSLPVVAVFMDEHAAREELSTLASLAAIRKETPLDFDRFRASVGMGWMG 197
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-- 215
D+ + ++ + IS KGCY+GQE ++R+ K + ++ L
Sbjct: 198 IDYSDAQ-LAQESGRTAV-AISFHKGCYLGQEPIARLDAMGHTNKELVRLSTEVSLSDQD 255
Query: 216 ----SGSPILTDD--IEIGTLGV------VVGKKALAIARID-KVDHAI-KKGMALTVHG 261
+G+ + D +G + +G L R +V++ + G G
Sbjct: 256 KSSWAGAELFADSEPKSVGVITTFCPHDDQLGGVGLGYVRTKWQVENQMLHVGTP---EG 312
Query: 262 VRVKASFP 269
+ P
Sbjct: 313 PTINVHVP 320
>gi|317122029|ref|YP_004102032.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885]
gi|315592009|gb|ADU51305.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885]
Length = 372
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 110/305 (36%), Gaps = 46/305 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A LQ ++T DV L A + + TP+G ++ L+ ++++ ++
Sbjct: 59 SHMGEIEVSGPGARQALQRLVTNDVERLVPGRALYTVMCTPEGGVVDDLLVYQLDDQRYM 118
Query: 67 LEIDRSKRDSLIDKLLFYK------------------------------LRSNVIIEIQP 96
L ++ + ++ + + + +V +E
Sbjct: 119 LVVNAANTARDLEWVREHAGGPQVTVVDRSLETALLALQGPRAQAILSLVTDDVDLEALR 178
Query: 97 INGVVLSWNQ-------EHTFSNSSFIDERFSIADVLLHRTWGHNEK-IASDIKTYHELR 148
V W F+ + A G E + + + LR
Sbjct: 179 PFHFVGGWEGMISRTGYTGEDGFELFVSWDGAPAIWRGILAAGEPEGLVPAGLGARDTLR 238
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ + + T P +A +D + + KG ++G++ + R + + + +K +
Sbjct: 239 LEACLPLYGQELDLETT-PLEAGLDFV--VKWDKGPFLGRDALLRQRQQGLRKKLVGLRL 295
Query: 209 GTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+ +G +L + +G + + ++A+A + A+ + +A+ + G
Sbjct: 296 LEPGVARTGYRVLDERGEPVGRVTSGTVAPTLQASIALAYVPPAVAAVGQRLAVEIRGRA 355
Query: 264 VKASF 268
V A
Sbjct: 356 VAAQV 360
>gi|151337026|gb|ABS00962.1| aminomethyltransfersae [Thermus aquaticus]
Length = 260
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 80/241 (33%), Gaps = 40/241 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ + G A FLQ T D+ L L +G+I + E L
Sbjct: 22 GLLLLKGPDAFGFLQGQGTRDLRRLKGPGGVL--FLNHRGQIEEAATLFPHPEG--FLLA 77
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
+ L +L Y + V++E P+ ++ + +E
Sbjct: 78 PWGTLEGLRARLERYIVFDQVVLEELPLYRLLHADGREEVAERG---------------- 121
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+ ++ + + G+ + + P + L+ + KGCY+GQE
Sbjct: 122 ------EGGLPLEVFPLYALLKGVP--LLEDIRGE-LPQSVGL--LHLVDYGKGCYVGQE 170
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTL----GVVVGKKALAIARI 244
+++R + + + +R G + L + + +G + G L + R
Sbjct: 171 IMARTEGKEVPYRRV----GLEGLKAGEVGELFLEGRRVGEIKRLQRTPFGLLGLGLVRR 226
Query: 245 D 245
+
Sbjct: 227 E 227
>gi|218294697|ref|ZP_03495551.1| folate-binding protein YgfZ [Thermus aquaticus Y51MC23]
gi|218244605|gb|EED11129.1| folate-binding protein YgfZ [Thermus aquaticus Y51MC23]
Length = 257
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 40/241 (16%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ + G A FLQ T D+ L L +G+I + E L
Sbjct: 19 GLLLLKGPDAFSFLQGQGTRDLRRLEGPGGVL--FLNHRGQIEEAATLFPHPEG--FLLA 74
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR 129
L +L Y + V++E P+ ++ + +E
Sbjct: 75 PWGALKGLRARLERYIVFDQVVLEELPLYRLLHADGREEVAERG---------------- 118
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+ ++ + + G+ + + P + L+ + KGCY+GQE
Sbjct: 119 ------EGGLPLEVFPLYALLKGVP--LLEDIRGE-LPQSVGL--LHLVDYGKGCYVGQE 167
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTL----GVVVGKKALAIARI 244
+++R + + + P + G L + + +G + G L + R
Sbjct: 168 IMARTEGKEV----PYRLVGLKGLKAGEVGELFLEGRRVGEIKRLQRTPFGLLGLGLVRR 223
Query: 245 D 245
+
Sbjct: 224 E 224
>gi|50288779|ref|XP_446819.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637641|sp|Q6FSH5|CAF17_CANGA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49526128|emb|CAG59750.1| unnamed protein product [Candida glabrata]
Length = 497
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 64/188 (34%), Gaps = 50/188 (26%)
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSR 193
EK+ D + + ++ +G +D + P ++ P + D N +S KGCY+GQE+ +R
Sbjct: 303 EKLEKDSSFFKQCKLQYGFLDGSDAIQPDSLMPLELNFDYFPNTVSNNKGCYVGQELTAR 362
Query: 194 IQHRNIIRKRPMIIT-------------------------------------------GT 210
I+RKR + I G
Sbjct: 363 TYSTGILRKRLIPIEFENLSEQAVKLLNECDKYPDIEVEVDPKNQEPEPLQSTAPSPFGN 422
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA----LTVHG--VRV 264
+ + + GTL GK +A+ RI+ + LT+ + V
Sbjct: 423 SPFGNASTKLRQRKKAAGTLISFDGKYGIALFRIEHFKNIYDTPTPSKFFLTIGQEKIDV 482
Query: 265 KASFPHWY 272
P WY
Sbjct: 483 TPQRPIWY 490
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 63/197 (31%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA-----------------------DVLTLPYKI----- 38
N+S+++V G I FL ++T+ D
Sbjct: 48 PNKSYLQVRGPDTIGFLNGLVTSKLLPTFVKKNLTTIEVSDEKNKKDTNNNESPEFNEKK 107
Query: 39 -------------------ARGSAILTPQGKILLYFLISKIEE-------------DTFI 66
SA L +GK++ +I ++
Sbjct: 108 GNWGIYNAESHNGPYLSRFGIYSAFLNGKGKLVTDSIIYPSPGVVNDQTEAKIKLYPEYL 167
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
LE D+ ++ +KL + + E +W+ +F + D I +V
Sbjct: 168 LEFDKDIIPRMLTSFESHKLHNKIKFE---EVKNTKTWDFFISFPGLTQNDPNPWIDNVY 224
Query: 127 LHRTWGHNEKIASDIKT 143
+ T+ N + +++
Sbjct: 225 VPLTYLKNAEASNEFAE 241
>gi|330950069|gb|EGH50329.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae Cit 7]
Length = 230
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 42/225 (18%)
Query: 81 LLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118
+ Y + S V +Q + ++S + S +
Sbjct: 1 MRKYAVFSKSKLTDESADWVRFGLQDGDAALVSLGLDLPQETDSVVRADDLIAIRVSPGR 60
Query: 119 -----RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
R + D + R + + ++R+ G V NT P +
Sbjct: 61 AELWVRSAQVDSIKARLASQLSEAPLNDWLLGQIRVGIGQVFGNT---REEFIPQMINLQ 117
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTD--DIEIGTL 230
+ G+S KGCY GQE+V+R+Q+ +++R +T + ++P G+ + + +G +
Sbjct: 118 AVGGVSFKKGCYTGQEIVARMQYLGKLKRRLYRLTLSGEEIPQPGTALFSPVHASAVGNV 177
Query: 231 GVVVGK----KALAIARIDKVDHAI-----KKGMALTVHGVRVKA 266
+ + LA+ + D + +G AL + +
Sbjct: 178 VIAAQDGQNIELLAVLQGDAAEDGRINLGSPEGAALQMSELPYTL 222
>gi|323488913|ref|ZP_08094150.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2]
gi|323397305|gb|EGA90114.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2]
Length = 366
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/317 (15%), Positives = 115/317 (36%), Gaps = 55/317 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G ++ +LQ ++T DV + A+ +A+ G + L+ KI + ++
Sbjct: 52 SHMGEIFVTGADSLDYLQHLVTNDVSKIQDGQAQYTAMCYEDGGTVDDLLVYKIADQHYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84
L ++ S + ++ +L +
Sbjct: 112 LVVNASNIEKDFDWMEASKTGDVTLDNASERFGLLAFQGPLSEQVLQRLTEEDLSTIKPF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKT 143
+ +++V + Q + + E+ F + + S+ + +L T G E + +
Sbjct: 172 RFKNDVEVAGQKVILSRTGYTGENGFEIYAAPEALVSLWEKIL--TEGEPEGVLPVGLGA 229
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR + + I P +A ++ + + L K ++G++ ++ + + RK
Sbjct: 230 RDTLRFEACLALYGQEL-SKDITPLEAGINFV--VKLKKEQDFLGKKALAAQKEAGVPRK 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
I +P G P+ D +IG + LA+ + + I+ +
Sbjct: 287 LVGIEMIDKGIPRHGYPVYVGDQKIGEVTTGTQSPTLKKNIGLALVSSEYAELGIELEVE 346
Query: 257 LTVHGVRVKASFPHWYK 273
+ ++ K +YK
Sbjct: 347 IRNKRLKAKTVETPFYK 363
>gi|319651520|ref|ZP_08005648.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2]
gi|317396835|gb|EFV77545.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2]
Length = 367
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 107/315 (33%), Gaps = 51/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G ++ +LQ ++T D+ L A+ +A+ G + L+ KIE+D ++
Sbjct: 52 SHMGEIEVKGTDSLKYLQKMMTNDISKLKNSGAQYTAMCYENGGTVDDLLVYKIEDDHYL 111
Query: 67 LEIDRSKRDSLIDKLLFYK---------------------LRSNV--------------- 90
L ++ S + + L + L V
Sbjct: 112 LVVNASNIEKDFNWLQDHAEGNVELKNLSEDMAQLAIQGPLAEKVLQKLAGTNLSDIGFF 171
Query: 91 ----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145
+++ +V + D + ++A + G E + +
Sbjct: 172 KFQQDVDLNGKKALVSRTGYTGEDGFEVYCDAQDAVAIWIEILEAGKEEGVLPCGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR + + P I P +A + + + K +IG+EV+ + + RK
Sbjct: 232 TLRFEANLALYGQELSPE-ITPLEAGIGF--AVKVNKEADFIGKEVLKNQKENGVPRKLA 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
I +P G P+ + IG + L + + + D + +
Sbjct: 289 GIEMIDRGIPRHGYPVYKGEELIGEVTTGTQSPTLKKNIGLVLIKKEHADPGTDLEVEIR 348
Query: 259 VHGVRVKASFPHWYK 273
++ K + +YK
Sbjct: 349 GKRLKAKIAATPFYK 363
>gi|289524103|ref|ZP_06440957.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502759|gb|EFD23923.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 375
Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK A+ F+ ++T DV L S + G ++ LI +E+ F+
Sbjct: 59 SHMGEITVEGKDALKFINYLVTNDVTKLVPGKVMYSPMCYEHGGVVDDLLIYMYDENRFL 118
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L ++ + K + ++ KL F
Sbjct: 119 LVVNAANKDKDYQWIVDKSKKFDVKAEDVSDSYAQIAIQGPKAEGILQKLTDVALDEMKF 178
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y + V + + + E F + I D LL + + + +
Sbjct: 179 YTFKDRVSVGGVDLLLSRTGYTGEDGFELYLLPGDAGHIWDELL-KAGKEEGLVPAGLGA 237
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + L+K +IG+ + + + + RK
Sbjct: 238 RDTLRFEACLPLYGQEL-SEDITPLEAGLGFF--VKLSKEDFIGRASLLEQKEKGLKRKI 294
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+ +P G + + +G + ALA+ ID V+ + + +
Sbjct: 295 AGLEMVEKGVPRHGYEVKSQGKSVGVITSGSYAPSLEKYLALALLDIDYVEIGREVHVDI 354
Query: 258 TVHGVRVKASFPHWYK 273
K +YK
Sbjct: 355 RGKDRLAKVVETPFYK 370
>gi|254430285|ref|ZP_05043988.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp.
PCC 7001]
gi|197624738|gb|EDY37297.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp.
PCC 7001]
Length = 325
Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 100/297 (33%), Gaps = 47/297 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFIL 67
+ +++ G + FL +A + P + ++P G++ L L+ + + L
Sbjct: 20 TLLRLEGTDSRRFLHGQTSAAIELAPPGAWIPTCCISPTGRMRALAEVLV---DGEGAWL 76
Query: 68 EIDRSKRDSLIDKLLFYKLR--SNV---IIEIQPINGVVLSWNQEH-TFSNSSFIDERFS 121
+ +++ L L V +E + V+ + + + +
Sbjct: 77 VVSAGDGEAVRSALDR-VLFPADQVGLGTLEPARLITVLPPVSPDSGPMAAPAAPLSWGE 135
Query: 122 IADVLLHR-----TWGHNEKIASDIKTY--------HELRINHGIVDPNTDFLPSTIFPH 168
+ + R + +++ R+ G+ + + P
Sbjct: 136 LGGGVGWRLGASWLLRDGAPLPAELAALPALGDHDQERWRLQQGLPAASAEL-NDDTNPF 194
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT---------GTDDLPPSGSP 219
+ + + +SL+KGCY+GQE ++++ + ++++ +P G+
Sbjct: 195 ELGLA--DRVSLSKGCYVGQETLAKLATYDGVKQQLRRWHWCQRPEGSPAAATVPEPGTV 252
Query: 220 ILT----DDIEIGTLGVVV-----GKKALAIARIDKVDH-AIKKGMALTVHGVRVKA 266
+L D G + + LA+ R ++ A+ G R+
Sbjct: 253 LLHPDNPDGGRAGRVTSALQLDGGDWIGLALVRRQALEAPALLLGPEPGAGLARLSV 309
>gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
gi|172044257|sp|A4J2F6|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
Length = 364
Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 96/314 (30%), Gaps = 63/314 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +A F+Q ++T D+ L A S + PQG + L+ ++E+ ++
Sbjct: 52 SHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRSNVII 92
L ++ S + + ++ +L V +
Sbjct: 112 LVVNASNTDKDFHWIVSQQVPGVEIQNVSEVTCQLALQGPQAEKILQRLTA------VDL 165
Query: 93 E-IQPINGVVLSWNQEHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASD 140
I+ V + H + + F + T +
Sbjct: 166 SHIKSFCFVYGAVEGIHCLISRTGYTGEAGFELYFPASHAERVWQAIMATGATDGLRPVG 225
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR + + I P A + + K ++G+E + + +
Sbjct: 226 LGARDTLRFEACLALYGHELT-DDISPLMAGLGWT--VKFNKPEFVGKEPLLKQKEAGTT 282
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254
+ + +P G I + E+G + L I D + K
Sbjct: 283 YQLVGLEMIDRGIPRQGYAIFKEGQEVGWITSGTFAPTLGKNMGLGYVEIPFAD--VGKE 340
Query: 255 MALTVHGVRVKASF 268
+ + V +KA
Sbjct: 341 LNIMVRNKPLKARI 354
>gi|229086800|ref|ZP_04218963.1| Aminomethyltransferase [Bacillus cereus Rock3-44]
gi|228696521|gb|EEL49343.1| Aminomethyltransferase [Bacillus cereus Rock3-44]
Length = 366
Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDTKVVNVSSEIAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL + +
Sbjct: 172 KFKNDILVDGTPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGEEDGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKETLKEYKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + K++ +A +D AI + + +
Sbjct: 288 VGIEVTGRGIPRTHYPVYIGEEKIGEVTSGTQSPTLNKSIGLALVDVKYAAIDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|254422863|ref|ZP_05036581.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus
sp. PCC 7335]
gi|196190352|gb|EDX85316.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus
sp. PCC 7335]
Length = 292
Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 71/194 (36%), Gaps = 28/194 (14%)
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFS---IADVLLHRTWGHNEKIASDIKT------ 143
I N S T +S+ D R + + + WG EK + +
Sbjct: 89 AIADDNLQQASSGDSGTQESSTPDDIRMACDVELAIPGYTLWGPIEKADATQQAILSTGI 148
Query: 144 -------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LRI G P+ + P +A + + +S KGCYIGQE ++R+
Sbjct: 149 TVGTQAEWESLRIQQGRPTPHKELTDDD-NPLEAGL--WHSVSFEKGCYIGQETIARLNT 205
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIK 252
++KR + + GS I D +G L + G L R A
Sbjct: 206 YKGVKKRLWGLAIDRSVLE-GSDIALDGKIVGKLTSLTNTEAGFFGLGYIRT----KAGG 260
Query: 253 KGMALTVHGVRVKA 266
+G+ + + G + K
Sbjct: 261 EGLDVEIAGAKAKV 274
>gi|158319124|ref|YP_001511631.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus
oremlandii OhILAs]
gi|166989723|sp|A8MEG4|GCST_ALKOO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|158139323|gb|ABW17635.1| glycine cleavage system T protein [Alkaliphilus oremlandii OhILAs]
Length = 368
Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/308 (18%), Positives = 99/308 (32%), Gaps = 49/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q ++T DV L + + P G I+ L+ K ++ +
Sbjct: 52 SHMGEIEVRGKDAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDDLLVYKFNKEYYY 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L ++ S D + K +V I I V + D S
Sbjct: 112 LVVNASNSDKDFAWMNENKGAYDVEIINISDSVSQVAVQGPKAEEIVQELTDTDLSEIPF 171
Query: 123 -----------ADVLLHRT--------------------WGHNEKIASD-------IKTY 144
A+ L+ RT W ++ D +
Sbjct: 172 FYFKNDVVINGANCLISRTGYTGEDGFEIYVDNDKVDALWDKIIEVGKDRGLKPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P +A + + L K +IG++ + R + + RK
Sbjct: 232 DTLRFEATLPLYGHEI-DKDISPLEAGLGFF--VKLNKENFIGKDALVRQKEEGLKRKVV 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260
+ +P G + D IG + L A ID A+ + + V
Sbjct: 289 GFEMKENGIPRQGYEVKVGDKVIGVVTTGYNSPTLKKNIGYALIDAEYAALGTPIDIQVR 348
Query: 261 GVRVKASF 268
+KA
Sbjct: 349 KKTLKAEV 356
>gi|332977714|gb|EGK14477.1| aminomethyltransferase [Desmospora sp. 8437]
Length = 367
Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 109/310 (35%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A+ LQ ++T DV L + +A+ P G + LI + E +
Sbjct: 53 SHMGEVEVEGAGALDLLQKLMTNDVSKLVDGRIQYTAMCYPDGGTVDDLLIYRKGEGRYF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWN-------QEHTFSNSSFIDE 118
L ++ + D ++ + + ++ +V ++ I G++ Q T ++ S I
Sbjct: 113 LVLNAANIDKDVEWIEKH-IQGDVAVKNISAETGLLALQGPLAEQVLQGLTETDLSQIKP 171
Query: 119 -------------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144
A +L R ++ I +
Sbjct: 172 FGFQDGVSLGEVKGLVSRTGYTGEDGFEIYLPAQDAPILWKRILEAGKERGVIPCGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + ++I P +A + + KG +IG+EV+++ + RK
Sbjct: 232 DTLRFEARLPLYGNEL-SASISPIEAGIGF--AVKPDKGEFIGREVLAKQKEEGAPRKLV 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
+ +P S P+ D E+G + LA+ + + + + + +
Sbjct: 289 GLEMVGRGIPRSHYPVYVGDAEVGEVTSGTQSPTLKKNVGLALIQAEHAELGREVDVEIR 348
Query: 259 VHGVRVKASF 268
+ K
Sbjct: 349 GRRIPAKIIK 358
>gi|78183841|ref|YP_376275.1| hypothetical protein Syncc9902_0259 [Synechococcus sp. CC9902]
gi|78168135|gb|ABB25232.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 265
Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 23/252 (9%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI--EEDTFILE 68
+K+ G+ FLQ +ADV P + LT G++ + D +L
Sbjct: 13 LLKLEGEGTRNFLQGQTSADVADTPEGNLVQTCWLTATGRLRALLELRLRANGADVLVLA 72
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
D + D+++F R + +QPI + T S + ++D+ D L
Sbjct: 73 GDATAVARGFDQVIFPADR----VRLQPIAEQ-RRVQRLSTSSAALWLDD-----DSQLP 122
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
W N ++ K + RI +V + + P + + + +SL+KGCY+GQ
Sbjct: 123 PNWTSNP---ANPKQFERWRIEQRLVFGPGEL-NADANPLELGL--SDHVSLSKGCYLGQ 176
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244
E V+++ + ++ + + G + + GT+ V+ G LA+ R
Sbjct: 177 ETVAKLANLGGAKQEL-RGWICNQVLSVGDTLRANGERAGTITSVLDTSEGSIGLALVRR 235
Query: 245 DKVDHAIKKGMA 256
+ G
Sbjct: 236 RHLSAETLDGSD 247
>gi|114567495|ref|YP_754649.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338430|gb|ABI69278.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 366
Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 103/308 (33%), Gaps = 51/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G+ A FLQ +++ D+ + + + + P G ++ L+ K + ++
Sbjct: 51 SHMGEIEVRGEKAEAFLQYLLSNDINKIAPGQVQYNIMCYPDGGVVDDLLVYKYTTEHYL 110
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRS---- 88
L ++ + + ++ KL +L S
Sbjct: 111 LVVNAANTDKDFEWIKKNAFPGVEIENLSDDYAQMAIQGPLAEQILQKLTDLELHSIKYY 170
Query: 89 --NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
+EI ++ ++ +I G + +
Sbjct: 171 WFQANVEIAGKIAIISRTGYTGEDGFEIYLAPEDAIDVWEAILAAGGEDIAPIGLGARDS 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR + + P I P +A + + + G +IG+E + R + R + +
Sbjct: 231 LRFEAKLPLYGQELGPD-ISPLEARLGIF--VKFDCGDFIGREALLRQKESQPPRVQAEL 287
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVH 260
+ +P S + + IG L G A LA+A +D+ + + + +
Sbjct: 288 LMLERGIPRSHYEVCQEGKVIGQLSS--GGLAPSLEKNLALALVDREYYQPGAEVEVMIR 345
Query: 261 GVRVKASF 268
VKA
Sbjct: 346 NKPVKAQI 353
>gi|156839684|ref|XP_001643530.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114145|gb|EDO15672.1| hypothetical protein Kpol_1008p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 502
Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 65/180 (36%), Gaps = 48/180 (26%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNII 200
+ R+ +GI+D DF TI+P + D LN ++ KGCY+GQE+ +R+ I+
Sbjct: 317 NEFRSYRLKNGIIDSVRDFRSETIWPLELNFDFFLNSVNPDKGCYLGQEITTRMFSTGIL 376
Query: 201 RKRPMIITGTD-----------------------DLPPSGSPILTD---------DIEIG 228
RKR + + + + + I IG
Sbjct: 377 RKRLIPVKLENYQNLKDNEDTATNYYDITLQTPISVKNEATEINNPFSNQAFSRRQRPIG 436
Query: 229 TLGVVVGKKALAIARIDKVDHAIKKGMALT---------------VHGVRVKASFPHWYK 273
TL G+ +AI R + ++ K L ++V P WY+
Sbjct: 437 TLICNEGENGVAIIRTEYLNSIFKNQGNLNNNMFIRIESKISDSETKTIKVIPRKPFWYE 496
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 58/143 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------- 38
SN+++IK+ G A FL ++TA ++ T+
Sbjct: 54 SNKAYIKIIGPEAPKFLNGLVTAKLLPKFVKKNLTTISPNSDTLKELGNGEIVRFDESHD 113
Query: 39 ------------------ARGSAILTPQGKILLYFLISKI------------EEDTFILE 68
+ +L +GK++ +I ++LE
Sbjct: 114 NWGIYNEVSANGPYISRFGVYTGLLNSKGKLITDTIIYPTPLIFDKTPVGGKNYPIYLLE 173
Query: 69 IDRSKRDSLIDKLLFYKLRSNVI 91
D S D +++ +KL S +
Sbjct: 174 FDNSIVDDVLEIFDIHKLNSKIK 196
>gi|121533521|ref|ZP_01665349.1| glycine cleavage system T protein [Thermosinus carboxydivorans
Nor1]
gi|121308080|gb|EAX48994.1| glycine cleavage system T protein [Thermosinus carboxydivorans
Nor1]
Length = 365
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A F+ ++T D L + + G ++ L+ ++ E ++
Sbjct: 51 SHMGEVSVSGPDATDFVNRLVTNDASRLAVNQVMYTPMCYDHGGVVDDLLVYRLGEQEYL 110
Query: 67 LEIDRS-----------------------------------KRDSLIDKL--------LF 83
L I+ + + ++++ +L +
Sbjct: 111 LVINAANIDKDYAWMVQHAANYDVTVKNISDVTAELALQGPRAEAILQRLTDEDLSTIKY 170
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y LR +V ++ + E F +E + L+ + + +
Sbjct: 171 YWLRRHVRVDGIDCLISRTGYTGEDGFEIYCAPEEAGRLWKRLME-VGKPLGLVPAGLGA 229
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G+ + +I P +A + + + K +IG E + ++ I RK
Sbjct: 230 RDTLRFEAGLPLYGHEL-SESITPLEAGLGVF--VKFDKQSFIGYEALLAQKNAGIRRKI 286
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
I + +G IGT+ ALAI + + + +
Sbjct: 287 VGIEMVGRGIARAGYTCHAAGRVIGTVTSGTYAPTLDKNLALAILETEFSAPGTEVAVEI 346
Query: 258 TVHGVRVKASFPHWYK 273
V K +YK
Sbjct: 347 RGKLVEAKVVTKPFYK 362
>gi|229916267|ref|YP_002884913.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b]
gi|229467696|gb|ACQ69468.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b]
Length = 362
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 103/302 (34%), Gaps = 46/302 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A+ +Q ++T D+ + A+ + + G ++ L+ +++ED +
Sbjct: 57 SHMGEIRIEGPDALEQVQNLVTNDISKIKVGQAQYNLLCLEDGGVVDDLLVYRLDEDAYW 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----TFSNSSF------ 115
L ++ S + + Y V+ G + T +N +
Sbjct: 117 LVVNASNIEKDEAHIRRYVKGDVVVTNESDEYGQIAIQGPNAQSVLQTITNVALDEIGFF 176
Query: 116 ------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRIN 150
I R + E I++ + LR
Sbjct: 177 KFMNGDVAGVPSIISRSGYTGEDGFEIYARAEAISAIWEALEAEGVTPCGLGARDTLRFE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + ++ P +A ++ + ++G+E + Q NI + +
Sbjct: 237 ACLPLYGHEL-DESVTPFEANLNFAVKLDTD---FVGKEALV-TQKENIPNRLIGLKLLG 291
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ G+ + D IG + +++A AR+D + ++ + + G +++A
Sbjct: 292 RGIARQGAQVELDGNVIGVVTTGTMPPTVNESIAWARVD-ARYKDEERFVIDIRGKKIEA 350
Query: 267 SF 268
Sbjct: 351 ER 352
>gi|317128398|ref|YP_004094680.1| glycine cleavage system protein T [Bacillus cellulosilyticus DSM
2522]
gi|315473346|gb|ADU29949.1| glycine cleavage system T protein [Bacillus cellulosilyticus DSM
2522]
Length = 363
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/311 (19%), Positives = 110/311 (35%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G+ A+PFLQ ++T DV L + +A+ G + ++ K E++ ++
Sbjct: 51 SHMGEIEVKGQEALPFLQKMLTNDVSKLKDMACQYNAMCYENGGTVDDLVLYKREDNHYL 110
Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84
L ++ S +S+ KL F+
Sbjct: 111 LVVNASNIEKDYEWLKQHATEKVEVINVSNQYAQIAVQGPLAESITQKLTKEDLSTITFF 170
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKT 143
K R V++ + + + E F D+ S+ + LL G E I +
Sbjct: 171 KFREGVVVANKDVLISRTGYTGEDGFEIYCRPDDAISLWNALL--DAGKEEGIQPCGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR + + P +A + + K ++G+ V+ + + RK
Sbjct: 229 RDTLRFEARLPLYGQELSRDIS-PIEAGIGFAVKVD-KKEDFLGKVVLKQQKEDGPERKL 286
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P + + D +IG + LAI IDK A+ + +
Sbjct: 287 VGIEMIDKGIPRTDYEVFKDGEKIGFVTTGTQSPTLKKNVGLAI--IDKKFQAVDTVVEV 344
Query: 258 TVHGVRVKASF 268
V R+KA
Sbjct: 345 QVRKRRLKAKV 355
>gi|323304291|gb|EGA58065.1| Iba57p [Saccharomyces cerevisiae FostersB]
Length = 497
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 49/176 (27%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAEHEPTLNPFTNKPPERTK--RKQRPA 434
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273
G L G +A+ R + A + +++ P W +K
Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKITPQKPFWFSDWK 490
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKXDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQIPNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHXNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|284047088|ref|YP_003397428.1| glycine cleavage T protein (aminomethyl transferase) [Conexibacter
woesei DSM 14684]
gi|283951309|gb|ADB54053.1| glycine cleavage T protein (aminomethyl transferase) [Conexibacter
woesei DSM 14684]
Length = 311
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/301 (17%), Positives = 105/301 (34%), Gaps = 41/301 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A +LQA ++AD+ + +A+LTP+G++ + + E ++
Sbjct: 14 SDAGKLSVTGPDAFDYLQAHLSADLRGVAVGAGSATALLTPRGQVRALARVLRFER-GWL 72
Query: 67 LEIDRSKRDSLID---------KLLFYKLRS-NVIIEIQPINGVV-LSWNQEHTFSNSSF 115
L +R+ + L ++ +KL ++ + + V L Q +
Sbjct: 73 LHCERAALEGLFRGLWNGRIGWRVELHKLTLQQALVTVLGDDAVARLGLAQALGAGEHAH 132
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIK----------------------TYHELRINHGI 153
+ R+W + +A + R+ G
Sbjct: 133 AAAALDGVPLRAVRSWAGVDLVARADHADALAAAIAARAGAGAAPLERCDWDWRRVIAGR 192
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D + T+ P + + ++ KG Y G + V R Q + +R + L
Sbjct: 193 LAYGVD-VAETMLPAELALSP-PLVATEKGLYPGMQTVLRQQRSGTVHRRICRLHAPV-L 249
Query: 214 PPSGSPIL--TDDIEIGTLGVVVGKKALAIARI--DKVDHAIKKGMALTVHGVRVKASFP 269
G +L D GT+ V LA+ R+ D + + TV + + P
Sbjct: 250 LAPGDELLGGADGPSAGTITSGVCFDGLALVRLRGDGSAPLVHRPSGATVQARPLDSGAP 309
Query: 270 H 270
Sbjct: 310 S 310
>gi|76800870|ref|YP_325878.1| aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
gi|76556735|emb|CAI48309.1| homolog to aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
Length = 360
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/316 (19%), Positives = 103/316 (32%), Gaps = 58/316 (18%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I V G + F+ +T V + +L PQG I I E +
Sbjct: 48 YGIIDVGGDDRLEFVDNAVTNRVPE-TDGAGSYALLLDPQGGIETELYIYNAGE-RLLCF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQ-PINGVVLSWNQEHTFSNSS------------ 114
+ + + + ++ K V I + GV + T +S
Sbjct: 106 VPPGRAEPVAEEWA-DKTFIQDVDINVATDDYGVFGVHGPKATEKVASVLTGPTTPEEPL 164
Query: 115 -FIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDFLPSTIF 166
F+ R + RT G + A D + +NHG+ +
Sbjct: 165 EFVRGRVGDWGTTVIRTDGLTGEEGYEIVCAADDAANVFDALVNHGLNAAPFGYRTLEYL 224
Query: 167 PHDAL---------------MDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+A + L N + KGCY+GQEVVS+I+++ + + I
Sbjct: 225 WLEAGTPLFETELEGTVPNVLGLRNALDFEKGCYVGQEVVSKIENQGRPSRELVGIKLDA 284
Query: 212 DLPPSGSPILTDDIEIGTLGVV------VGKKALAI-----------ARIDKVDHAIKKG 254
+ P +G+ + D +G + G ALA+ RID D A ++
Sbjct: 285 E-PTAGAAVFDGDSHVGEVTRGDYSPALDGAIALALVEYGLESDDLTVRIDSDDVAAERV 343
Query: 255 MALTVHGVRVKASFPH 270
V G A P
Sbjct: 344 QLPFVDGSARSARLPS 359
>gi|323308509|gb|EGA61754.1| Iba57p [Saccharomyces cerevisiae FostersO]
Length = 497
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 49/176 (27%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+ G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIXFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAEXEPTLNPFTNKPPERTK--RKQRPA 434
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-------TVHGVRVKASFPHW---YK 273
G L G +A+ R + A + +++ P W +K
Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKXENIKITPQKPFWFSDWK 490
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKXDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQIPNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL S + E + + +W+ E F N
Sbjct: 170 LLELHXNVVDKILHVLQTHKLASKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|261407445|ref|YP_003243686.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10]
gi|261283908|gb|ACX65879.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10]
Length = 370
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/309 (18%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ A F+Q + T DV + A+ + + +G + L+ K+ D F+
Sbjct: 53 SHMGEFMISGQDAEAFIQNMTTNDVTRITVGQAQYTLMCNDKGGTVDDLLVYKLSSDRFM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112
L ++ S D + L + + +V I +++ +
Sbjct: 113 LVVNASNIDKDLQWLHEH-VTGDVAIRNVSAETALIALQGPAAENILSKATSEMLGDIPS 171
Query: 113 SSFI-DERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
FI + + LL RT E I + +
Sbjct: 172 FHFIQNAQVCGHAALLSRTGYTGEDGFEIYCSAADAPDIWRGLLTAGKDHGLIPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + STI P +A + + L G +IG+E + + + + RK
Sbjct: 232 DTLRFEAKLPLYGQEL-SSTISPLEASLGYF--VKLDSGDFIGREALQQQKQDGVPRKLV 288
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P S P+L IG + K+ L +A I+ ++ + + +
Sbjct: 289 GIELIDRGIPRSHYPVLNGNGEPIGEVTSGTQSPSLKRNLGLALIETPYASLDSEVWVEI 348
Query: 260 HGVRVKASF 268
G ++KA
Sbjct: 349 RGKKLKAKV 357
>gi|304406524|ref|ZP_07388180.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus
YK9]
gi|304344582|gb|EFM10420.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus
YK9]
Length = 376
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/315 (16%), Positives = 108/315 (34%), Gaps = 59/315 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A FLQ + T DV L A+ + + +G ++ L+ ++ D ++
Sbjct: 53 SHMGRLTVTGLFAEAFLQRLTTNDVSLLKDGRAQYTLMCNNEGGVIDDLLVYRLSADQYM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERFSIA-- 123
L ++ S +++ L + + ++ I+ +L+ + S +D A
Sbjct: 113 LVVNASNTTQVLEWLREHLI-GDITIDNMTERTALLALQGPDAAAILSDALDAAPGAAWN 171
Query: 124 ----------------DVLLHRTWGHNE---------------------------KIASD 140
L+ RT E +A+
Sbjct: 172 KLTSFQFMQSATVCGVPALVSRTGYTGEDGFELYAAAADAEALWNGLLQAGERYGAVAAG 231
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ + + +I P +A + + KG +IG+ V+ +
Sbjct: 232 LGARDTLRLEARLPLHGHEL-SDSITPVEAGLRAF--VKPDKGDFIGRSVLLKQLTEGAP 288
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKK 253
R+ I +P +G I D +++G + LA+ + D A+
Sbjct: 289 RRLVGIELAERSIPRAGYAIFAADGVQVGYVTSGTHAPTLKRNIGLALLQADYA--ALGT 346
Query: 254 GMALTVHGVRVKASF 268
+ + + G AS
Sbjct: 347 PLLVDIRGASCPASV 361
>gi|89099220|ref|ZP_01172098.1| aminomethyltransferase [Bacillus sp. NRRL B-14911]
gi|89086066|gb|EAR65189.1| aminomethyltransferase [Bacillus sp. NRRL B-14911]
Length = 368
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 112/312 (35%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G+++ FLQ ++T D+ L A+ +A+ G + L+ K E+D ++
Sbjct: 52 SHMGEIEVKGQASQDFLQKMMTNDISKLKSGGAQYTAMCYESGGTVDDLLVYKFEDDHYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKLL---------F 83
L ++ + + ++ KL F
Sbjct: 112 LVVNAANIEKDYQWLEDHLIDGADIRNLSDQTAQLALQGPAAEGILQKLAGEKDLSEIGF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
+K S+V + + + E F D+ SI + +L + +
Sbjct: 172 FKFSSDVDLNGKKALVSRTGYTGEDGFEIYCHSDDASSIWNDILE-AGKEEGVLPCGLGC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR + + P + P +A + + + K +IG+ V+ + + + RK
Sbjct: 231 RDTLRFEANLALYGQELSPD-VTPLEAGIGF--AVKINKEADFIGKPVLKQQKENGVPRK 287
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
+ +P G P+L D ++G + LA+ + + + +
Sbjct: 288 LVGLEMIDRGIPRHGYPVLADGEQVGEVTTGTQSPTLKKNIGLALIKTQYAE--LGNEVE 345
Query: 257 LTVHGVRVKASF 268
+ + G R+KA
Sbjct: 346 VEIRGKRLKAVI 357
>gi|311030892|ref|ZP_07708982.1| glycine cleavage system aminomethyltransferase T [Bacillus sp.
m3-13]
Length = 367
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 106/316 (33%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK ++ +LQ ++T DV L A+ +A+ P G + L+ K ++ ++
Sbjct: 52 SHMGEIEVKGKDSLAYLQKMMTNDVSKLKDGGAQYTAMCYPDGGTVDDLLVYKKADEDYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84
L ++ S + ++ KL F+
Sbjct: 112 LVVNASNIEKDFDWLKSHAIEEVEVTNISESIAQLAIQGPVAEKVLQKLTSTDLSEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K + NV I + E F ++ + + LL + + + +
Sbjct: 172 KFKENVEINGVSALVSRTGYTGEDGFEIYCQQEDAVKLWNTLLE-AGKEDGLVPCGLGSR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+EV+ + R
Sbjct: 231 DTLRFEAKLALYGQEL-SKDITPIEAGIGF--AVKTNKEEDFFGKEVLKEQKENGAPRSI 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + + +IG + LA+ + + + + + +
Sbjct: 288 VGIEMIDKGIPRHGYEVFVGEEQIGEVTTGTQSPTLKKNVGLALLKKEFTEFDTEVEVQV 347
Query: 258 TVHGVRVKASFPHWYK 273
++ K +Y+
Sbjct: 348 RKKRLKAKVVKAPFYQ 363
>gi|269926601|ref|YP_003323224.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269790261|gb|ACZ42402.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 371
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 45/269 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++ G++A+ FL +T + L A+ + I G + ++ +++ED +
Sbjct: 52 LSHMGEFEITGENAVHFLNYCLTNNAAKLKIGQAQYTLIPYTDGSVADDAILYRLDEDKY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ---EHTFSNSSFIDER-- 119
+L ++ + ++ L KL V +E +++ E + +D R
Sbjct: 112 LLVVNAANTQKDLEWLSHQKLGFEKVNLEDISDRTALIAIQGPKSEGILQKLTSVDLRNL 171
Query: 120 ---------FSIADVLLHRTWGHNEKIASDIKTYHE------------------------ 146
+ D L+ RT E + +
Sbjct: 172 KYYHITKGEVTGIDALIARTGYTGEDGFEIFLPWDKATVVWRSLLDAGKDSGLKPAGLGS 231
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G+ + + P++A +D + L KG ++G+E + R + RK
Sbjct: 232 RDTLRIEAGMPLYGHEL-SEQVNPYEAGLDW--AVKLDKGDFVGREALEREKQLGPARKL 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+P + PI +IG +
Sbjct: 289 VGFTLLEMGVPRAEQPIQKQGRQIGFVTS 317
>gi|319948556|ref|ZP_08022686.1| glycine cleavage system aminomethyltransferase T [Dietzia cinnamea
P4]
gi|319437780|gb|EFV92770.1| glycine cleavage system aminomethyltransferase T [Dietzia cinnamea
P4]
Length = 370
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/313 (16%), Positives = 102/313 (32%), Gaps = 53/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + T D+ + A+ + G ++ + ++ +
Sbjct: 55 SHLGKALVSGPGAAEFVNSCFTNDLDRISAGSAQYTLCCDESGGVVDDLIAYRVSDSEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK------------LRSNVIIEIQ-PINGVVLSWNQEHTFSNS 113
L + + ++ +L RS +I +Q P+ G VL+ T +
Sbjct: 115 LIPNAANTAEVVRRLQAAAAERAPEVTVTDEHRSRAVIAVQGPLAGEVLTAVGLPTDLDY 174
Query: 114 -SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------------------- 146
+F+D F V + RT E + + E
Sbjct: 175 MAFVDADFGGRSVRICRTGYTGEYGFEVLPAWDEAGEVWDALAEQVLAREGALCGLGARD 234
Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR G + + P +A I K + G+E + R + R+
Sbjct: 235 SLRTEAGYPLHGNELSVD-LSPLEARCAW--AIGWDKPSFWGREELLRQKEAGPARRMYA 291
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH- 260
+ + +G + D ++G +A+A ID +D +KKG + V
Sbjct: 292 LQVTGRGVLRAGQTVRADGRDVGVTSSGTFSPTLKTGIALAFID-LDAGLKKGDEVIVDV 350
Query: 261 ---GVRVKASFPH 270
V + + P
Sbjct: 351 RGREVPCRLAVPP 363
>gi|304380875|ref|ZP_07363535.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340602|gb|EFM06536.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 363
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-TK----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +K +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFVSKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMDRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|229031877|ref|ZP_04187865.1| Aminomethyltransferase [Bacillus cereus AH1271]
gi|228729495|gb|EEL80484.1| Aminomethyltransferase [Bacillus cereus AH1271]
Length = 366
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|258423190|ref|ZP_05686083.1| glycine cleavage system T protein [Staphylococcus aureus A9635]
gi|257846640|gb|EEV70661.1| glycine cleavage system T protein [Staphylococcus aureus A9635]
Length = 363
Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQDVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGKVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|323702144|ref|ZP_08113811.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM
574]
gi|323532831|gb|EGB22703.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM
574]
Length = 364
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 99/306 (32%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A +Q+IIT DV L A + + P G + L+ ++EE+ ++
Sbjct: 52 SHMGEIQITGPGARELIQSIITNDVNRLTPGAALYTPMCHPTGGTVDDLLVYQLEENQYL 111
Query: 67 LEIDRSKRDSLIDKLLFY-----------------------------KLRS------N-- 89
L ++ + + + + Y KL S
Sbjct: 112 LVVNAANIEKDYNWVKVYANEGVEVKNVSDVTCQLALQGPRAIKILQKLTSVDLNEIKHF 171
Query: 90 --VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHE 146
V ++ IN ++ + + G E I +
Sbjct: 172 HFVYGLVEGINCLISRTGYTGEDGFELYFPAEHARLLWRAILAAGQGEGIKPVGLGARDT 231
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR + + ++ P A + + KG ++G+E + + + K +
Sbjct: 232 LRFEACLALYGHELT-DSVSPVMAGLGWT--VKFNKGDFVGREALLQQKETGPSHKLVGL 288
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262
+P G I D E+G + K L + + A+ + + V G
Sbjct: 289 EMIDRGIPRQGYTISKDGQEVGWITSGTFAPSIGKNLGLGYVAAQWVAVGTELDIMVRGK 348
Query: 263 RVKASF 268
+KA
Sbjct: 349 ALKAKI 354
>gi|282916807|ref|ZP_06324565.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus D139]
gi|283770613|ref|ZP_06343505.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19]
gi|282319294|gb|EFB49646.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus D139]
gi|283460760|gb|EFC07850.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus H19]
gi|298694819|gb|ADI98041.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ED133]
Length = 363
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQDVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|15924527|ref|NP_372061.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu50]
gi|15927117|ref|NP_374650.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus N315]
gi|21283218|ref|NP_646306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MW2]
gi|49486373|ref|YP_043594.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651931|ref|YP_186435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus COL]
gi|87160187|ref|YP_494193.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88195343|ref|YP_500147.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148268021|ref|YP_001246964.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus JH9]
gi|150394088|ref|YP_001316763.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus JH1]
gi|151221653|ref|YP_001332475.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979855|ref|YP_001442114.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509765|ref|YP_001575424.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253314906|ref|ZP_04838119.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. CF-Marseille]
gi|253732190|ref|ZP_04866355.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253733214|ref|ZP_04867379.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus TCH130]
gi|255006323|ref|ZP_05144924.2| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus Mu50-omega]
gi|257793613|ref|ZP_05642592.1| glycine cleavage system T protein [Staphylococcus aureus A9781]
gi|258411087|ref|ZP_05681367.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9763]
gi|258420109|ref|ZP_05683064.1| glycine cleavage system T protein [Staphylococcus aureus A9719]
gi|258437369|ref|ZP_05689353.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9299]
gi|258443575|ref|ZP_05691914.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A8115]
gi|258446782|ref|ZP_05694936.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6300]
gi|258448696|ref|ZP_05696808.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6224]
gi|258451194|ref|ZP_05699229.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A5948]
gi|258453513|ref|ZP_05701491.1| glycine cleavage system T protein [Staphylococcus aureus A5937]
gi|262049119|ref|ZP_06021996.1| aminomethyltransferase [Staphylococcus aureus D30]
gi|262051200|ref|ZP_06023424.1| aminomethyltransferase [Staphylococcus aureus 930918-3]
gi|269203166|ref|YP_003282435.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus ED98]
gi|282893038|ref|ZP_06301272.1| glycine cleavage system T protein [Staphylococcus aureus A8117]
gi|282924785|ref|ZP_06332452.1| glycine cleavage system T protein [Staphylococcus aureus A9765]
gi|282929008|ref|ZP_06336595.1| glycine cleavage system T protein [Staphylococcus aureus A10102]
gi|284024596|ref|ZP_06378994.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 132]
gi|294848567|ref|ZP_06789313.1| glycine cleavage system T protein [Staphylococcus aureus A9754]
gi|295406659|ref|ZP_06816464.1| glycine cleavage system T protein [Staphylococcus aureus A8819]
gi|296275107|ref|ZP_06857614.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MR1]
gi|297207744|ref|ZP_06924179.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245758|ref|ZP_06929623.1| glycine cleavage system T protein [Staphylococcus aureus A8796]
gi|300911825|ref|ZP_07129268.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|54037178|sp|P64225|GCST_STAAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54037179|sp|P64226|GCST_STAAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54041304|sp|P64224|GCST_STAAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56748970|sp|Q6G929|GCST_STAAS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|61213198|sp|Q5HFM2|GCST_STAAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122539427|sp|Q2FY33|GCST_STAA8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123485681|sp|Q2FGI5|GCST_STAA3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221573|sp|A7X2S3|GCST_STAA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|172048902|sp|A6QH81|GCST_STAAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039476|sp|A6U208|GCST_STAA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039477|sp|A5IT65|GCST_STAA9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039478|sp|A8Z476|GCST_STAAT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|13701335|dbj|BAB42629.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus N315]
gi|14247308|dbj|BAB57699.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204658|dbj|BAB95354.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MW2]
gi|49244816|emb|CAG43270.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286117|gb|AAW38211.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus COL]
gi|87126161|gb|ABD20675.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202901|gb|ABD30711.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147741090|gb|ABQ49388.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus JH9]
gi|149946540|gb|ABR52476.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150374453|dbj|BAF67713.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721990|dbj|BAF78407.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368574|gb|ABX29545.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723979|gb|EES92708.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253728754|gb|EES97483.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus TCH130]
gi|257787585|gb|EEV25925.1| glycine cleavage system T protein [Staphylococcus aureus A9781]
gi|257840237|gb|EEV64701.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9763]
gi|257843820|gb|EEV68214.1| glycine cleavage system T protein [Staphylococcus aureus A9719]
gi|257848574|gb|EEV72562.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A9299]
gi|257850981|gb|EEV74924.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A8115]
gi|257854357|gb|EEV77306.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6300]
gi|257857974|gb|EEV80863.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A6224]
gi|257861249|gb|EEV84062.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus A5948]
gi|257864244|gb|EEV86994.1| glycine cleavage system T protein [Staphylococcus aureus A5937]
gi|259160837|gb|EEW45857.1| aminomethyltransferase [Staphylococcus aureus 930918-3]
gi|259162788|gb|EEW47353.1| aminomethyltransferase [Staphylococcus aureus D30]
gi|262075456|gb|ACY11429.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus ED98]
gi|282589415|gb|EFB94506.1| glycine cleavage system T protein [Staphylococcus aureus A10102]
gi|282592792|gb|EFB97798.1| glycine cleavage system T protein [Staphylococcus aureus A9765]
gi|282764356|gb|EFC04482.1| glycine cleavage system T protein [Staphylococcus aureus A8117]
gi|283470815|emb|CAQ50026.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ST398]
gi|285817219|gb|ADC37706.1| Aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus 04-02981]
gi|294824593|gb|EFG41016.1| glycine cleavage system T protein [Staphylococcus aureus A9754]
gi|294968406|gb|EFG44430.1| glycine cleavage system T protein [Staphylococcus aureus A8819]
gi|296887761|gb|EFH26659.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177409|gb|EFH36661.1| glycine cleavage system T protein [Staphylococcus aureus A8796]
gi|300886071|gb|EFK81273.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|312829926|emb|CBX34768.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129814|gb|EFT85804.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS03]
gi|315198769|gb|EFU29097.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS01]
gi|320140578|gb|EFW32432.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144115|gb|EFW35884.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323440434|gb|EGA98146.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus O11]
gi|323443208|gb|EGB00826.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus O46]
gi|329727485|gb|EGG63941.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21172]
gi|329728484|gb|EGG64921.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21189]
gi|329730824|gb|EGG67202.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21193]
Length = 363
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|87300708|ref|ZP_01083550.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701]
gi|87284579|gb|EAQ76531.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701]
Length = 296
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 100/293 (34%), Gaps = 46/293 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDTFIL 67
S I++ G ++ FL + D+ + LTP ++ L L+ + L
Sbjct: 2 SLIRLDGPDSLRFLHGQSSQDLERAQPGQCLATCCLTPTARVRGLAEVLV---DAKGARL 58
Query: 68 EIDRSKRDSLIDKLLFYKLR--SNVIIEIQPINGVVLSWNQEHTFSNSS----FIDERFS 121
I + L L V + + G ++ + + R
Sbjct: 59 VITAGDGAVIHQALDR-VLFPADQVTLGPL-LAGTLIILEGAGAMAEPAMGWQLPGHRLV 116
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
+ D I+ H R++ G + + P + + + +SL+
Sbjct: 117 LRDGECLPAELEAIPALGPIEAEHW-RLSQGRPLAPNEI-SDEVNPFELGLA--DRVSLS 172
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE---IGTLGVVVGKK- 237
KGCY+GQE ++++ + ++++ + P + D++ +G + G +
Sbjct: 173 KGCYVGQETLAKLATYDGVKQQLRRWCWAEPAPTAARADTASDVQRPVVGAVLRTPGGER 232
Query: 238 ---------------------ALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ R A+++ + +T G+ ++ S P
Sbjct: 233 AGRITSSLRLNAGADGSSVWLGLALVR----RQALEEPLLVTGEGITLEISIP 281
>gi|213417502|ref|ZP_03350644.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 95
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EEDTFILEIDRSKRDSLI 78
+ +E RS R++ +
Sbjct: 79 RDGFAWIE-RRSVREAQL 95
>gi|229019448|ref|ZP_04176270.1| Aminomethyltransferase [Bacillus cereus AH1273]
gi|229025690|ref|ZP_04182095.1| Aminomethyltransferase [Bacillus cereus AH1272]
gi|229075932|ref|ZP_04208908.1| Aminomethyltransferase [Bacillus cereus Rock4-18]
gi|229098699|ref|ZP_04229639.1| Aminomethyltransferase [Bacillus cereus Rock3-29]
gi|229104856|ref|ZP_04235516.1| Aminomethyltransferase [Bacillus cereus Rock3-28]
gi|229117724|ref|ZP_04247093.1| Aminomethyltransferase [Bacillus cereus Rock1-3]
gi|228665701|gb|EEL21174.1| Aminomethyltransferase [Bacillus cereus Rock1-3]
gi|228678573|gb|EEL32790.1| Aminomethyltransferase [Bacillus cereus Rock3-28]
gi|228684778|gb|EEL38716.1| Aminomethyltransferase [Bacillus cereus Rock3-29]
gi|228707247|gb|EEL59444.1| Aminomethyltransferase [Bacillus cereus Rock4-18]
gi|228735629|gb|EEL86219.1| Aminomethyltransferase [Bacillus cereus AH1272]
gi|228741860|gb|EEL92038.1| Aminomethyltransferase [Bacillus cereus AH1273]
Length = 366
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFVGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|82751141|ref|YP_416882.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus RF122]
gi|123727409|sp|Q2YSZ2|GCST_STAAB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|82656672|emb|CAI81098.1| aminomethyltransferase [Staphylococcus aureus RF122]
Length = 363
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G ++ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGVIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFAANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|49483786|ref|YP_041010.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257425662|ref|ZP_05602086.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428323|ref|ZP_05604721.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430960|ref|ZP_05607340.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433649|ref|ZP_05610007.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus E1410]
gi|257436562|ref|ZP_05612606.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M876]
gi|282904119|ref|ZP_06312007.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905946|ref|ZP_06313801.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282911175|ref|ZP_06318977.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914344|ref|ZP_06322130.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M899]
gi|282919313|ref|ZP_06327048.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C427]
gi|282924638|ref|ZP_06332306.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C101]
gi|283958301|ref|ZP_06375752.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293503418|ref|ZP_06667265.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510435|ref|ZP_06669141.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M809]
gi|293530975|ref|ZP_06671657.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M1015]
gi|295428115|ref|ZP_06820747.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590919|ref|ZP_06949557.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|56749024|sp|Q6GGG2|GCST_STAAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|49241915|emb|CAG40609.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271356|gb|EEV03502.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275164|gb|EEV06651.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278390|gb|EEV09026.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281742|gb|EEV11879.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus E1410]
gi|257283913|gb|EEV14036.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M876]
gi|282313473|gb|EFB43868.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C101]
gi|282317123|gb|EFB47497.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C427]
gi|282321525|gb|EFB51850.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M899]
gi|282324870|gb|EFB55180.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282331238|gb|EFB60752.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595737|gb|EFC00701.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus C160]
gi|283790450|gb|EFC29267.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920243|gb|EFD97309.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291095084|gb|EFE25349.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466799|gb|EFF09319.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus M809]
gi|295128473|gb|EFG58107.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575805|gb|EFH94521.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|312437995|gb|ADQ77066.1| glycine cleavage system T protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195438|gb|EFU25825.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus CGS00]
Length = 363
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFGAIVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|302333213|gb|ADL23406.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 363
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNRYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYKVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFASKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|150864230|ref|XP_001382966.2| hypothetical protein PICST_40677 [Scheffersomyces stipitis CBS
6054]
gi|158513692|sp|A3LNW4|CAF17_PICST RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|149385486|gb|ABN64937.2| CCR4 transcriptional complex component [Scheffersomyces stipitis
CBS 6054]
Length = 469
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ R +G+ + + T+ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 269 NMRRNVNGLFEGQDADIDQTLLPFECNLDYTNGLSLDKGCYVGQELTIRTYNNGVIRKRI 328
Query: 205 MIITGTDDLPPSGSPILTDD 224
M + ++ + I
Sbjct: 329 MPVQFFENNEETVDEISNQG 348
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 57/142 (40%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29
++ I+V GK A FL +IT+
Sbjct: 12 SKGIIQVVGKDATKFLNGLITSRMLPNVVKKKQHTISENENRHANLSEIIDINNNWGLMH 71
Query: 30 -DVLTLPYKIARG-----SAILTPQGKILLYFLISKIE-------------EDTFILEID 70
D+ I G S L +G++ + + F++E+D
Sbjct: 72 GDIYDPEENIFIGRDGLNSMFLNSKGRVTADCFLYSFPFHNSKGSFEEVLKKPNFLIEVD 131
Query: 71 RSKRDSLIDKLLFYKLRSNVII 92
+ L +KL + V I
Sbjct: 132 SRIIPEMESLLRIHKLSAKVKI 153
>gi|170760490|ref|YP_001786048.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A3 str. Loch Maree]
gi|238688514|sp|B1KWD5|GCST_CLOBM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169407479|gb|ACA55890.1| glycine cleavage system T protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 370
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 56/303 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118
Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90
+ ++ K + F+KLR +V
Sbjct: 119 KDKDVKWIMDHKGDFDVEIADVSDSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDV 178
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147
+++ + + E F I + A L H ++ + + L
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFE 292
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 293 LIDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352
Query: 264 VKA 266
+KA
Sbjct: 353 LKA 355
>gi|317407096|gb|EFV87104.1| hypothetical protein HMPREF0005_05798 [Achromobacter xylosoxidans
C54]
Length = 102
Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
L + + G A+ FL +T DV LP AR + T +G++L ++ +
Sbjct: 17 QCAPLEDFAVFGASGADALTFLHGQLTQDVTGLPADAARLAGYCTAKGRLLATLVMWRGA 76
Query: 62 EDT-----FILEIDRSKRDSLIDKLL 82
+ + + +L+ +L
Sbjct: 77 DPAEDAPRLYGLVRQDLAAALVKRLS 102
>gi|229163174|ref|ZP_04291129.1| Aminomethyltransferase [Bacillus cereus R309803]
gi|228620237|gb|EEK77108.1| Aminomethyltransferase [Bacillus cereus R309803]
Length = 366
Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|221140043|ref|ZP_03564536.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|269941027|emb|CBI49411.1| putative aminomethyltransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|302751368|gb|ADL65545.1| aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|329314214|gb|AEB88627.1| Aminomethyltransferase [Staphylococcus aureus subsp. aureus T0131]
Length = 363
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F+Q +++ D L A +A+ +G I+ +I K+ +D ++
Sbjct: 53 SHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---NGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + +L +K +E+Q + G + + + +DE +
Sbjct: 113 LVVNAANTEKDFNWILKHK--EKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEM 170
Query: 124 ---------------------------DVLLHRTWGHNEKIASDIKTY----------HE 146
++ EKI + Y
Sbjct: 171 KMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-TK----GCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +K +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDLT-ESITPYE------GGIAFVSKPLIDADFIGKSVLKDQKENGAPR 283
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G ++ D IG + K++A+A I + + + + +
Sbjct: 284 RTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELL 343
Query: 257 LTVHGVRVKASF 268
+ V ++KA
Sbjct: 344 VQVRKRQLKAKI 355
>gi|329948165|ref|ZP_08295037.1| glycine cleavage T-protein barrel domain protein [Actinomyces sp.
oral taxon 170 str. F0386]
gi|328522898|gb|EGF50003.1| glycine cleavage T-protein barrel domain protein [Actinomyces sp.
oral taxon 170 str. F0386]
Length = 424
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 18/184 (9%)
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
V G+ E + + R A V G + ++A + + LRI
Sbjct: 205 VEGGTSYDVGLERPHLGEGYRAGFILVPARCVGAVVRTFLAVGSDRRLAGAL-AWEALRI 263
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + + PH+ +D L + LTKGCY GQE ++R + +R ++
Sbjct: 264 EAGRPRRAHE-ADARAIPHE--LDWLRTAVHLTKGCYPGQETIARTLNLGRPPRRLAVLQ 320
Query: 209 GT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKKGMALTVH 260
DLP G+ + + +GT+ V G ALA+ R A+ G LTV
Sbjct: 321 LDGLGGDLPQPGAVVRMGERTVGTVTSVARHHELGPIALALLR-----RAVPAGEQLTVE 375
Query: 261 GVRV 264
V
Sbjct: 376 ITEV 379
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 13/172 (7%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67
+ + V G + +L + + + L + +L QG I L + + T L
Sbjct: 49 RDVVTVTGPDRLSWLTTLSSQVLTALEPGDGGAETLLLDAQGHITH-ALAALDDGRTLWL 107
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
+ L L + V + +P + + + + D +D
Sbjct: 108 VTEAGGGADLAAFLDSMRFMLRVEVTERPDVQALGALREGLDVLAQAARDTSVDSSDTSD 167
Query: 128 HRTWGHNEKIASDIKTYHELRIN-----------HGIVDPNTDFLPSTIFPH 168
++ +D + G+V+ T + PH
Sbjct: 168 AQSDAAGTAGTTDTAERTDAEAQGSLIGLWRDPWPGVVEGGTSYDVGLERPH 219
>gi|323154590|gb|EFZ40789.1| tRNA-modifying protein ygfZ [Escherichia coli EPECa14]
Length = 220
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 12/190 (6%)
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+++ +L + + + + L F +L S ++ L W + D
Sbjct: 3 IAPDDERVLLGVAGFQARAALANL-FSELPSKEK-QVVKEGATTLLWFEHPAERFLIVTD 60
Query: 118 ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
E + A++L + G E ++ + + L I G + P + L G
Sbjct: 61 E--ATANMLTDKLRGEAE--LNNSQQWLALNIEAGFPVIDA-ANSGQFIPQATNLQALGG 115
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDIEIGTLGVVVGK 236
IS KGCY GQE+V+R + R ++ ++ G+ LP +G + ++++G G
Sbjct: 116 ISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDL---ELKMGENWRRTGT 172
Query: 237 KALAIARIDK 246
LA +++
Sbjct: 173 V-LAAVKLED 181
>gi|322805022|emb|CBZ02582.1| aminomethyltransferase (glycine cleavage system T protein)
[Clostridium botulinum H04402 065]
Length = 359
Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 56/302 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118
Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90
+ ++ K + F+KL+ +V
Sbjct: 119 KDKDVKWVMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147
+++ + + E F I + A L H ++ + + L
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKELWHAILNAGKEEGAQPIGLGARDTL 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFE 292
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G ++ D IG + KA+ +A +++ I + V R
Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGAEFNIKVKKKR 352
Query: 264 VK 265
+K
Sbjct: 353 IK 354
>gi|229174904|ref|ZP_04302424.1| Aminomethyltransferase [Bacillus cereus MM3]
gi|228608572|gb|EEK65874.1| Aminomethyltransferase [Bacillus cereus MM3]
Length = 366
Score = 82.2 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEEDFFGKETLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|284166725|ref|YP_003405004.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
gi|284016380|gb|ADB62331.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
Length = 375
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 63/316 (19%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ V G + ++ +++ V + +L PQG + + + E +L
Sbjct: 48 YGVVVVEGDDRLEYVDNVVSNRV-PAEDGRGCYALVLDPQGGVEIELYVYNAGE-RLLLF 105
Query: 69 IDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT-------FSNSSFIDERF 120
S+ + L++ K+ V I + + + + + ++ DER+
Sbjct: 106 TPPSEAEPLVEDWS-EKVFIQDVDIRLATDDYAIFGIHGPTATEKVASVLNGAASPDERY 164
Query: 121 SIA-------DVLLHRTWGHNEKI------ASDIK--------------------TYHEL 147
S V + RT + A+D T+ L
Sbjct: 165 SFVRGTMGDEGVTVIRTDALTGEESYEVICAADAAEDVYDILETQGLNAAPFGYRTFESL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G T+ P ++ L N + KGCY+GQEVVSR+++R ++ + +
Sbjct: 225 ALEAGSPLFETEL--EGTLP--NVLGLRNALDWEKGCYVGQEVVSRVENRGQPSRKLVGL 280
Query: 208 T-------------GTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIK- 252
T G +P + + + D +G + L A+ + VD+ ++
Sbjct: 281 TLEGAASDGEDDEDGAPAVPDAEAAVFDGDATVGEVTRAGESPLLEAVIALAVVDYGLES 340
Query: 253 KGMALTVHGVRVKASF 268
+ + + V G V A+
Sbjct: 341 EDLTVRVGGEEVSATV 356
>gi|229168971|ref|ZP_04296688.1| Aminomethyltransferase [Bacillus cereus AH621]
gi|228614563|gb|EEK71671.1| Aminomethyltransferase [Bacillus cereus AH621]
Length = 366
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 107/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109
L I+ S + + L + + + V + + + +
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170
Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIASDIKTY----------------- 144
F N+ +D R + +E+ A + +
Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEEAAKLWEKFLEVGAEEGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|298706608|emb|CBJ34215.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 191
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 35/139 (25%)
Query: 27 ITADVLTLPYK---IARGSAILTPQGKILLYFLISK------IEEDTFILEIDRSKRDSL 77
+T D+ L + +A L P+G+++ L+++ + ++++ S DSL
Sbjct: 1 MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSL 60
Query: 78 IDKLLFYKLRSNVIIEIQP------INGVVLSWNQEHTFSNSS----------------- 114
L YKLRS V I+ ++GV W
Sbjct: 61 KTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGR 120
Query: 115 ---FIDERFSIADVLLHRT 130
F D R + V L R
Sbjct: 121 EARFPDPRSAALGVRLIRP 139
>gi|157692956|ref|YP_001487418.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
gi|166989725|sp|A8FF41|GCST_BACP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157681714|gb|ABV62858.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
Length = 365
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/316 (15%), Positives = 100/316 (31%), Gaps = 64/316 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ ++
Sbjct: 50 SHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYL 109
Query: 67 LEIDR-------------------------------------------SKRDSLIDKLLF 83
L I+ D + L
Sbjct: 110 LVINASNIEKDVEWLLQHQGENDVLIQNVSDEIALLALQGPLAADIMKDVADEEVTSLKP 169
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
+ S + + + + E F ++ I LL + I +
Sbjct: 170 FTFLSKAEVAQKEVLVSRTGYTGEDGFEIYCQSEDAVHIWSALL-KVGAPKGLIPCGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQEVVSRIQHRN 198
LR + + I P + GI + +IG+E + + +
Sbjct: 229 RDTLRFEARLPLYGQELTKD-ISPLE------GGIGFAVKTDKEANFIGKEALKKQKEEG 281
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIK 252
RK I +P + P+ + + +IG + LA+ I+ +
Sbjct: 282 PKRKLVGIEMIDKGIPRTDYPVFSGEKQIGVVTTGTQSPTLKKNVGLAL--IESSQAQLG 339
Query: 253 KGMALTVHGVRVKASF 268
+ + V R+KA
Sbjct: 340 TVVEVQVRKKRLKAKI 355
>gi|56964260|ref|YP_175991.1| aminomethyltransferase [Bacillus clausii KSM-K16]
gi|59797659|sp|Q5WF30|GCST_BACSK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56910503|dbj|BAD65030.1| aminomethyltransferase [Bacillus clausii KSM-K16]
Length = 367
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 104/311 (33%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A+ LQA++T D+ L A+ +A+ T G + ++ + E+ ++
Sbjct: 53 SHMGELLVEGPDALNNLQALVTNDLSKLQDNQAQYNAMCTESGGTVDDLIVYRRNENAYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L ++ + S I+ + + + V + +I ++ + + DE S
Sbjct: 113 LVLNAANIQSDIEWIRAH-VSGQVTLTDISNETALLAVQGPKALAVLQTLTDEPLSEIRP 171
Query: 123 -----------------------------------ADVLLHRTWGHNEK---IASDIKTY 144
A L E + +
Sbjct: 172 FRFKENVMFAAIPVLASRTGYTGEDGFELYVKAGDAAELWRAILAAGEPFGLLPCGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IGQ+ + + + + RK
Sbjct: 232 DTLRFEARLPLYGQELTKD-ISPIEAGIGF--AVKTDKQAAFIGQQALKKQKEQGPSRKL 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P +G + ++G + L +A+ D AI + +
Sbjct: 289 VGIEMVDRGIPRTGYRVFYQGQDVGFVTSGTQSPTLGKNVGLVLAKADAA--AIDTELEV 346
Query: 258 TVHGVRVKASF 268
V G R++A
Sbjct: 347 EVRGKRLRARV 357
>gi|294678406|ref|YP_003579021.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294477226|gb|ADE86614.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003]
Length = 831
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 85/279 (30%), Gaps = 48/279 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + + +P + +L P+G I ++++ E F
Sbjct: 494 MTSFGKIRVEGRDATAFLQRLCANQID-VPVGRIVYTQMLNPRGGIESDLTVTRLSETAF 552
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
L + + + L + V I VL N
Sbjct: 553 FLVVPGATLPRDLAWLRRHLTEERVTITDVTAAEAVLPIMGPRARDLLRRVSPDDFSNAA 612
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142
H F + R S L + ++ A +
Sbjct: 613 HPFGTAREIEIGMGLARAHRVSYVGELGWELYISTDQAAHVFETLAKAGAEVGLRLCGLH 672
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D +A + + KG ++G+E V R + + R+
Sbjct: 673 AMDSCRIEKGYRHFGHDITDEDHV-LEAGLGF--AVKPEKGDFLGREAVLRKRESGLTRR 729
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+T + L PIL D +G L AL
Sbjct: 730 LVQFRLTDPEPLLFHNEPILRDGKIVGQLTSGNYGHALG 768
>gi|163941988|ref|YP_001646872.1| glycine cleavage system aminomethyltransferase T [Bacillus
weihenstephanensis KBAB4]
gi|229013446|ref|ZP_04170583.1| Aminomethyltransferase [Bacillus mycoides DSM 2048]
gi|229135049|ref|ZP_04263854.1| Aminomethyltransferase [Bacillus cereus BDRD-ST196]
gi|229807552|sp|A9VH12|GCST_BACWK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|163864185|gb|ABY45244.1| glycine cleavage system T protein [Bacillus weihenstephanensis
KBAB4]
gi|228648434|gb|EEL04464.1| Aminomethyltransferase [Bacillus cereus BDRD-ST196]
gi|228747858|gb|EEL97724.1| Aminomethyltransferase [Bacillus mycoides DSM 2048]
Length = 366
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109
L I+ S + + L + + + V + + + +
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170
Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIA-----------------SDIKTY 144
F N+ +D R + +E A +
Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|194016802|ref|ZP_03055415.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
gi|194011408|gb|EDW20977.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
Length = 365
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/309 (17%), Positives = 114/309 (36%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A+PFLQ ++T DV L A +A+ G + L+ + E++ ++
Sbjct: 50 SHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDE------- 118
L I+ S + ++ LL ++ ++V+I+ + ++ DE
Sbjct: 110 LVINASNIEKDVEWLLQHQGENDVLIQNVSDQIALLALQGPLAADIMKDVADEEVTSLKP 169
Query: 119 -----RFSIA--DVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPST 164
R +A +VL+ RT E + + + L + G
Sbjct: 170 FTFLSRAEVAQKEVLVSRTGYTGEDGFEIYCQSEDAVHIWSAL-LKAGAPKGLIPCGLGA 228
Query: 165 -----------IFPHDALMD---LLNGISL-----TKGCYIGQEVVSRIQHRNIIRKRPM 205
++ + D L GI + +IG+E + + + RK
Sbjct: 229 RDTLRFEARLPLYGQELSKDISPLEGGIGFAVKTDKEANFIGKEALKKQKEEGPKRKLVG 288
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + + +IG + LA+ I+ + + + V
Sbjct: 289 IEMIDKGIPRTDYPVFSGEKQIGVVTTGTQSPTLKKNVGLAL--IESSQAQLGTEIEVQV 346
Query: 260 HGVRVKASF 268
R+KA
Sbjct: 347 RKKRLKAKI 355
>gi|229061919|ref|ZP_04199247.1| Aminomethyltransferase [Bacillus cereus AH603]
gi|228717362|gb|EEL69032.1| Aminomethyltransferase [Bacillus cereus AH603]
Length = 366
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 105/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109
L I+ S + + L + + + V + + + +
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKV-VNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKF 170
Query: 110 --FSNSSFID------ERFSIADVLLHRTWGHNEKIA-----------------SDIKTY 144
F N+ +D R + +E A +
Sbjct: 171 FKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKETLKEQKENGASRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|206895461|ref|YP_002247382.1| glycine cleavage system T protein [Coprothermobacter proteolyticus
DSM 5265]
gi|206738078|gb|ACI17156.1| glycine cleavage system T protein [Coprothermobacter proteolyticus
DSM 5265]
Length = 361
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 49/285 (17%)
Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK- 85
+T D+ L A + +L G ++ ++ ++ D +L ++ + + +L Y
Sbjct: 69 VTVDLTKLEPLKAAYTMLLNESGGVVDDLIVYRLSPDEVLLVVNAANIEKDFQHILNYLP 128
Query: 86 -----LRSNV-----IIEIQPINGVV-----------LSWNQEHTFSNSSFIDERFSIAD 124
+ NV I +Q V L+ + I R
Sbjct: 129 KEGSHVFENVSDKWFDIAVQGPKAVDILKTYFPQVVDLAAFGFVSVPEHGLIISRTGYTG 188
Query: 125 VLLHRTWGHNEKIA-----------------SDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+G E+ + + LRI G+ + T P
Sbjct: 189 EDGFEVYGPMEEAPTWWNKFMDAGSSLGLKPAGLGARDTLRIEAGLPLYGHELNEETS-P 247
Query: 168 HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
++ + I K +IG+E + + + I+K+ M + T + G + ++ E+
Sbjct: 248 LESNYAFV--IDWDKPQFIGREALVKQKESG-IQKKLMGLEITGGIAREGYKVFSEGEEV 304
Query: 228 GTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + A+A R+DK + + V K
Sbjct: 305 GVVTSGTMAPFLKKSIAMAFLRVDKAKIGTPVEVQIHGQMVPAKV 349
>gi|317406758|gb|EFV86898.1| hypothetical protein HMPREF0005_06002 [Achromobacter xylosoxidans
C54]
Length = 152
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ +H + GI T P +DL+ G+S TKGCY GQEVV+R +R
Sbjct: 8 APAAQWHAADLAAGIP-WITTATQDVFIPQTVNLDLIQGVSFTKGCYPGQEVVARSHYRG 66
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDI 225
+++R T P G+ + D+
Sbjct: 67 TVKRRMAFGTIAGADLP-GAELAGKDV 92
>gi|226947956|ref|YP_002803047.1| glycine cleavage system T protein [Clostridium botulinum A2 str.
Kyoto]
gi|254797868|sp|C1FTW3|GCST_CLOBJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226843176|gb|ACO85842.1| glycine cleavage system T protein [Clostridium botulinum A2 str.
Kyoto]
Length = 370
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 48/299 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118
Query: 74 RDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID-----------ERFS 121
+D + ++ +K +V I ++ + +D +R
Sbjct: 119 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 122 IAD---VLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFL---------- 161
+ D L+ RT E K + +H + +N G +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAI-LNAGKEEGAQPIGLGARDTLRFE 237
Query: 162 ----------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
TI P + M + + + +IG++ + + + + RK
Sbjct: 238 ASLLLYGNEMDETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLVGFELLDK 296
Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+P G ++ D IG + KA+ +A +++ I + V ++KA
Sbjct: 297 GIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKKLKA 355
>gi|255537313|ref|XP_002509723.1| conserved hypothetical protein [Ricinus communis]
gi|223549622|gb|EEF51110.1| conserved hypothetical protein [Ricinus communis]
Length = 153
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 37/122 (30%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA------------------RGSA 43
S+ L+++S I+ G + FLQ ++T D+ + +A
Sbjct: 22 STSLLNSRSVIRFSGSDTVKFLQGLLTNDIRRFNETPSEATSFLRIPNLATVSVPPMYAA 81
Query: 44 ILTPQGKILLYFLISK--------------IEED-----TFILEIDRSKRDSLIDKLLFY 84
+LTPQG+ L + + E D + ++D D L+ +
Sbjct: 82 LLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPESDSNGSIELLADVDTYVLDELLHTFQRW 141
Query: 85 KL 86
+
Sbjct: 142 VI 143
>gi|323336892|gb|EGA78150.1| Iba57p [Saccharomyces cerevisiae Vin13]
Length = 516
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 44/165 (26%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
E+R G++D D++ T+ P + D N IS KGCY+GQE+ +R I+RKR
Sbjct: 317 REIRFQKGLIDSTEDYISETLLPLELNFDFFPNTISTNKGCYVGQELTARTYATGILRKR 376
Query: 204 PMIITGTD------------------------------------DLPPSGSPILTDDIEI 227
+ + + + PP +
Sbjct: 377 LVPVKLDNYQLLDTDPERKYAEFHIDNVVEKSLAENEPTLNPFTNKPPERTK--RKQRPA 434
Query: 228 GTLGVVVGKKALAIARIDKVDHAIKKGMAL-----TVHGVRVKAS 267
G L G +A+ R + A + T G +K +
Sbjct: 435 GLLISNEGLYGVALLRTEHFSAAFSSDEPVEFYITTTKGENIKIT 479
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|224476648|ref|YP_002634254.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254797881|sp|B9DNN7|GCST_STACT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|222421255|emb|CAL28069.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 364
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/317 (16%), Positives = 112/317 (35%), Gaps = 56/317 (17%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +S+ + + GK A F+Q I++ D L A+ +A+ +G I+ + K+
Sbjct: 47 MGIFDVSHMGEVLIEGKDASDFIQYILSNDTDQLTDNKAQYTALCNDKGGIIDDLITYKL 106
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDER 119
+ ++L ++ + + + + + +V +E + G + E S +D
Sbjct: 107 DNQKYLLVVNAANTEKDYNWINSHSENFDVKVENVSDQYGQLAVQGPEARDYVGSLVDVD 166
Query: 120 FSIAD-------------------------------------VLLHRTWGHNEK-IASDI 141
S V + NE + + +
Sbjct: 167 VSEMKPFDFKKDVTIFGKNIILSQSGYTGEDGFEIYCNSDDVVDIWDGLLENENLVPAGL 226
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQH 196
LR+ G+ D I P++ GI+ + +IG+EV+ +
Sbjct: 227 GARDTLRLEAGLPLHGQDL-SEDITPYE------GGIAFAAKPLIEADFIGKEVLKEQKE 279
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAI 251
+ + +P +G +L D +IG + K +A+A I++ + +
Sbjct: 280 NGSAERTIGLEMLDKGIPRTGYDVLDLDGNKIGVVTSGTQSPATGKGIALAIINRDEFEM 339
Query: 252 KKGMALTVHGVRVKASF 268
+ + + + +VKA
Sbjct: 340 GREVLVQIRKRQVKAKI 356
>gi|187777816|ref|ZP_02994289.1| hypothetical protein CLOSPO_01408 [Clostridium sporogenes ATCC
15579]
gi|187774744|gb|EDU38546.1| hypothetical protein CLOSPO_01408 [Clostridium sporogenes ATCC
15579]
Length = 370
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 106/301 (35%), Gaps = 48/301 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118
Query: 74 RDSLIDKLLFYK---------------------------LRSNVIIEIQPI------NGV 100
+D + ++ +K L+ V I++Q I V
Sbjct: 119 KDKDVKWIMDHKGDFNVEIVDESDNIAQLALQGPLAEEILQKIVDIDLQEIKFFKFKRDV 178
Query: 101 VLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASD---IKTYHELRINH 151
++ + ++ F I A L H ++ ++ + LR
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAEPIGLGARDTLRFEA 238
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
++ + T+ P + M + + + +IG++ + + + + RK
Sbjct: 239 SLLLYGNEM-DETVTPLEVGMGFFVKLKVQED-FIGKDALIKQKEEGVTRKLVGFELLDK 296
Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+P G ++ D IG + KA+ +A +++ I + V +KA
Sbjct: 297 GIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKELKAV 356
Query: 268 F 268
Sbjct: 357 V 357
>gi|253576440|ref|ZP_04853769.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844077|gb|EES72096.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 376
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 96/288 (33%), Gaps = 56/288 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G + FLQ + T DV L A+ + + P G ++ LI +++E ++
Sbjct: 55 SHMGEFFVEGPESERFLQHMTTNDVTLLQPGKAQYTLLCYPDGGVVDDLLIYQLDEGKYM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
L ++ S + D L + L + V + +L+ S S + E
Sbjct: 115 LVVNASNIEKDWDWLQQH-LPAEGVTMRNASDETALLAVQGPLAASLLSPLSEGEDPVAL 173
Query: 119 ---------RFSIADVLLHRTWGHNEK---------------------------IASDIK 142
R + LL RT E + + +
Sbjct: 174 RPFTFIREARIAGIPALLSRTGYTGEDGFELYVAAEQAQALWDILMEAGESHGLLPAGLG 233
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR + + P I P + ++ + L +G +IG++ + + + I R+
Sbjct: 234 ARDTLRFEACLPLYGQELGPE-ITPLEVGLNRF--VKLEQGDFIGRDALIKQRDEGIPRR 290
Query: 203 RPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVG------KKALAIA 242
+ +P + P+ + IG + +AI
Sbjct: 291 LVGLEMIDRGIPRTHYPVFAEGSEEPIGEVTTGTQSPTLKKNLGMAIL 338
>gi|329928153|ref|ZP_08282099.1| aminomethyltransferase [Paenibacillus sp. HGF5]
gi|328938030|gb|EGG34429.1| aminomethyltransferase [Paenibacillus sp. HGF5]
Length = 370
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ A F+Q + T DV + A+ + + G + L+ K+ D F+
Sbjct: 53 SHMGEFMISGQDAQAFIQNMTTNDVTRISVGQAQYTLMCDDNGGTVDDLLVYKLSSDRFM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112
L ++ S D + L + + +V I +++ +
Sbjct: 113 LVVNASNIDKDLQWLHEH-VTGDVAIRNVSAETALIALQGPAAENILSKATSETIGDLPS 171
Query: 113 SSFI-DERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
FI + + LL RT E I + +
Sbjct: 172 FHFIQNAQVCGHAALLSRTGYTGEDGFEIYCSAGDAPDIWRGLLTTGEDHGLIPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + STI P +A + + L G +IG+E + + + + RK
Sbjct: 232 DTLRFEAKLPLYGQEL-SSTISPLEASLGYF--VKLDSGDFIGREALQQQKQDGVRRKLV 288
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P S P+ IG + K+ L +A I+ ++ + + +
Sbjct: 289 GIELIDRGIPRSHYPVFNGNGEPIGEVTSGTQSPSLKRNLGLALIETPYASLDSEVWVEI 348
Query: 260 HGVRVKASF 268
G ++KA
Sbjct: 349 RGKKLKAKV 357
>gi|168178072|ref|ZP_02612736.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916]
gi|182671482|gb|EDT83456.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916]
Length = 370
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 109/306 (35%), Gaps = 48/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A F+Q ++T D+ L + + G ++ L+ K ED F
Sbjct: 52 SHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFF 111
Query: 67 LEIDRSKRDSLIDKLLFYK---------------------------LRSNVIIEIQPI-- 97
L I+ S +D + ++ +K L+ V I++Q I
Sbjct: 112 LVINASNKDKDVKWIMDHKGDFDVEIVDESDSIAQLALQGPLAEEILQKIVDIDLQEIKF 171
Query: 98 ----NGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIAS---DIKTY 144
V+++ + ++ F I A L H ++ + +
Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 232 DTLRFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349
Query: 261 GVRVKA 266
+KA
Sbjct: 350 KKELKA 355
>gi|229157826|ref|ZP_04285901.1| Aminomethyltransferase [Bacillus cereus ATCC 4342]
gi|228625783|gb|EEK82535.1| Aminomethyltransferase [Bacillus cereus ATCC 4342]
Length = 366
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKVWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|282860235|ref|ZP_06269306.1| aminomethyltransferase [Prevotella bivia JCVIHMP010]
gi|282586968|gb|EFB92202.1| aminomethyltransferase [Prevotella bivia JCVIHMP010]
Length = 364
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 92/292 (31%), Gaps = 52/292 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A F+ I T DV P + P G + L+ K+ E+ F L +
Sbjct: 58 VEGPDAERFVNNIFTNDVTNAPLGQVYYGMMCHPNGGTVDDLLVYKMGEEKFFLVYNAGN 117
Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTF---------------------- 110
D + + +K ++ IE G + E
Sbjct: 118 IDKDVAWIDAHKEGFDIKIEHASSRYGQLAVQGPEAEAVVDEVLGLPCKELKFYTAMFVN 177
Query: 111 -SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINHGIVD 155
+ + R +G + I + LR G+
Sbjct: 178 VDGAELVLSRTGYTGEDGFEIYGPHAYILAAWDKLLASGKCKPCGLGCRDTLRFEVGLPL 237
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLP 214
+ I P A + + + K +IG+ + + + ++ R + + G + +P
Sbjct: 238 YGDELT-DEISPVMAGLSMFCKLGEDKPDFIGKTALVDQKANGVAKRLRGIELEG-NAIP 295
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDK------VDHAIKKGMALTVH 260
G +L D +E+G + + +DK VD A+K G + V
Sbjct: 296 RHGYKVLKDGVEVGEITT-----GYRLLSVDKSCAVALVDDAVKMGDTVEVQ 342
>gi|50307117|ref|XP_453537.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636807|sp|Q6CRA2|CAF17_KLULA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|49642671|emb|CAH00633.1| KLLA0D10681p [Kluyveromyces lactis]
Length = 462
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 41/184 (22%)
Query: 122 IADVLLHRTWGHNEKIASDIKTYH--ELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGI 178
I D+ +G N ++I + R G+ D N +++P T+ +A D + I
Sbjct: 254 INDIFNCTAFGENPFEKANISATEIQKERFKFGLFDGNHEYIPETLLALEANFDYFEDSI 313
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-------------------------- 212
+ KGCY+GQE+ +R +++KR + IT +
Sbjct: 314 NSDKGCYVGQELTARTFATGVLKKRCVGITIDEPQKLADWDHSKYLSIFSKLELQVQNQD 373
Query: 213 ----LPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ P GS P+ G L G +A+ R D + HA+K H +
Sbjct: 374 TQAAINPFGSLSKPVKKRTRPAGQLINYNGNIGVAVVRKDYIYHALKHH-----HDIDAY 428
Query: 266 ASFP 269
P
Sbjct: 429 VELP 432
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 53/163 (32%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV------------------------------- 31
S + N+S+I++ G +I FL ++T+ +
Sbjct: 21 SCRVENKSYIRLLGPDSIKFLNGLVTSKLQPNFVKKNLTTISTKEQEKNNTLSSLNFSKY 80
Query: 32 --------LTLPYKIAR---GSAILTPQGKILLYFLISKIE------ED----TFILEID 70
L I+R + L +GK+L +I +D +++E D
Sbjct: 81 NWGIYKECTRLEDHISRFGTYTGFLNMKGKLLTDSIIYPYPFTLKSIQDKKFPEYLMEFD 140
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
+ L +KL S V + N + +W+ T
Sbjct: 141 SHIAQKMERTLDNHKLLSKVKFK-HVQNEELRTWDAYITMPEE 182
>gi|229152427|ref|ZP_04280619.1| Aminomethyltransferase [Bacillus cereus m1550]
gi|228631035|gb|EEK87672.1| Aminomethyltransferase [Bacillus cereus m1550]
Length = 366
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDTTVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|206978449|ref|ZP_03239315.1| glycine cleavage system T protein [Bacillus cereus H3081.97]
gi|206743347|gb|EDZ54788.1| glycine cleavage system T protein [Bacillus cereus H3081.97]
Length = 366
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCQSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPVEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|30022309|ref|NP_833940.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
ATCC 14579]
gi|30264300|ref|NP_846677.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Ames]
gi|47529744|ref|YP_021093.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187128|ref|YP_030380.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Sterne]
gi|49478588|ref|YP_038290.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|65321610|ref|ZP_00394569.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase)
[Bacillus anthracis str. A2012]
gi|165873271|ref|ZP_02217880.1| glycine cleavage system T protein [Bacillus anthracis str. A0488]
gi|167634578|ref|ZP_02392898.1| glycine cleavage system T protein [Bacillus anthracis str. A0442]
gi|167638652|ref|ZP_02396928.1| glycine cleavage system T protein [Bacillus anthracis str. A0193]
gi|170687482|ref|ZP_02878699.1| glycine cleavage system T protein [Bacillus anthracis str. A0465]
gi|170709331|ref|ZP_02899747.1| glycine cleavage system T protein [Bacillus anthracis str. A0389]
gi|177655891|ref|ZP_02937083.1| glycine cleavage system T protein [Bacillus anthracis str. A0174]
gi|190566093|ref|ZP_03019012.1| glycine cleavage system T protein [Bacillus anthracis
Tsiankovskii-I]
gi|206971185|ref|ZP_03232136.1| glycine cleavage system T protein [Bacillus cereus AH1134]
gi|218905363|ref|YP_002453197.1| glycine cleavage system T protein [Bacillus cereus AH820]
gi|227817001|ref|YP_002817010.1| glycine cleavage system T protein [Bacillus anthracis str. CDC 684]
gi|228916861|ref|ZP_04080424.1| Aminomethyltransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929271|ref|ZP_04092298.1| Aminomethyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228954511|ref|ZP_04116536.1| Aminomethyltransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228960493|ref|ZP_04122143.1| Aminomethyltransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228987418|ref|ZP_04147538.1| Aminomethyltransferase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229047921|ref|ZP_04193497.1| Aminomethyltransferase [Bacillus cereus AH676]
gi|229071730|ref|ZP_04204945.1| Aminomethyltransferase [Bacillus cereus F65185]
gi|229081485|ref|ZP_04213984.1| Aminomethyltransferase [Bacillus cereus Rock4-2]
gi|229111700|ref|ZP_04241248.1| Aminomethyltransferase [Bacillus cereus Rock1-15]
gi|229123745|ref|ZP_04252940.1| Aminomethyltransferase [Bacillus cereus 95/8201]
gi|229129506|ref|ZP_04258477.1| Aminomethyltransferase [Bacillus cereus BDRD-Cer4]
gi|229146795|ref|ZP_04275160.1| Aminomethyltransferase [Bacillus cereus BDRD-ST24]
gi|229180504|ref|ZP_04307846.1| Aminomethyltransferase [Bacillus cereus 172560W]
gi|229192437|ref|ZP_04319400.1| Aminomethyltransferase [Bacillus cereus ATCC 10876]
gi|229601336|ref|YP_002868518.1| glycine cleavage system T protein [Bacillus anthracis str. A0248]
gi|254683988|ref|ZP_05147848.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. CNEVA-9066]
gi|254721822|ref|ZP_05183611.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. A1055]
gi|254736336|ref|ZP_05194042.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Western North America USA6153]
gi|254741374|ref|ZP_05199061.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Kruger B]
gi|254753991|ref|ZP_05206026.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Vollum]
gi|254757862|ref|ZP_05209889.1| glycine cleavage system aminomethyltransferase T [Bacillus
anthracis str. Australia 94]
gi|296504707|ref|YP_003666407.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis BMB171]
gi|34921556|sp|Q818M3|GCST_BACCR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|34921567|sp|Q81M06|GCST_BACAN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|59797757|sp|Q6HDT6|GCST_BACHK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711365|sp|B7JMV1|GCST_BACC0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797864|sp|C3P8D5|GCST_BACAA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797865|sp|C3LKQ4|GCST_BACAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|29897866|gb|AAP11141.1| Aminomethyltransferase [Bacillus cereus ATCC 14579]
gi|30258945|gb|AAP28163.1| aminomethyltransferase [Bacillus anthracis str. Ames]
gi|47504892|gb|AAT33568.1| glycine cleavage system T protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181055|gb|AAT56431.1| glycine cleavage system T protein [Bacillus anthracis str. Sterne]
gi|49330144|gb|AAT60790.1| aminomethyltransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|164710988|gb|EDR16556.1| glycine cleavage system T protein [Bacillus anthracis str. A0488]
gi|167513500|gb|EDR88870.1| glycine cleavage system T protein [Bacillus anthracis str. A0193]
gi|167530030|gb|EDR92765.1| glycine cleavage system T protein [Bacillus anthracis str. A0442]
gi|170125757|gb|EDS94668.1| glycine cleavage system T protein [Bacillus anthracis str. A0389]
gi|170668677|gb|EDT19423.1| glycine cleavage system T protein [Bacillus anthracis str. A0465]
gi|172079924|gb|EDT65029.1| glycine cleavage system T protein [Bacillus anthracis str. A0174]
gi|190563012|gb|EDV16978.1| glycine cleavage system T protein [Bacillus anthracis
Tsiankovskii-I]
gi|206733957|gb|EDZ51128.1| glycine cleavage system T protein [Bacillus cereus AH1134]
gi|218538922|gb|ACK91320.1| glycine cleavage system T protein [Bacillus cereus AH820]
gi|227006887|gb|ACP16630.1| aminomethyltransferase [Bacillus anthracis str. CDC 684]
gi|228591014|gb|EEK48870.1| Aminomethyltransferase [Bacillus cereus ATCC 10876]
gi|228602928|gb|EEK60407.1| Aminomethyltransferase [Bacillus cereus 172560W]
gi|228636623|gb|EEK93088.1| Aminomethyltransferase [Bacillus cereus BDRD-ST24]
gi|228654111|gb|EEL09978.1| Aminomethyltransferase [Bacillus cereus BDRD-Cer4]
gi|228659880|gb|EEL15525.1| Aminomethyltransferase [Bacillus cereus 95/8201]
gi|228671694|gb|EEL26990.1| Aminomethyltransferase [Bacillus cereus Rock1-15]
gi|228701792|gb|EEL54279.1| Aminomethyltransferase [Bacillus cereus Rock4-2]
gi|228711325|gb|EEL63285.1| Aminomethyltransferase [Bacillus cereus F65185]
gi|228723378|gb|EEL74747.1| Aminomethyltransferase [Bacillus cereus AH676]
gi|228772390|gb|EEM20836.1| Aminomethyltransferase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228799190|gb|EEM46157.1| Aminomethyltransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228805168|gb|EEM51762.1| Aminomethyltransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228830561|gb|EEM76171.1| Aminomethyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842784|gb|EEM87869.1| Aminomethyltransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265744|gb|ACQ47381.1| glycine cleavage system T protein [Bacillus anthracis str. A0248]
gi|296325759|gb|ADH08687.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis BMB171]
Length = 366
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|254445973|ref|ZP_05059449.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
gi|198260281|gb|EDY84589.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 50/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + FL ++T DV T+ A S + P G ++ L+ ++ E +++
Sbjct: 52 SHMGEVTVKGPQSEAFLNYVLTNDVSTMDDGKALYSLMCQPDGGVVDDLLVYRMAEGSYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQ------------------- 106
L ++ + + L V +++ G+V
Sbjct: 112 LCLNAANAVKDVAWLEKEAANFEVELVDVSEKYGLVALQGPKAFPILKGLSSVDLSGLGY 171
Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-----------------H 145
+ + S I R + + EK A +
Sbjct: 172 YRFVQGEIAGISCIISRTGYTGEVGVELFVAAEKTAELAEALFDAGKADGLVLAGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR+ G + I P +A + +SL K C +IG+E + + +K
Sbjct: 232 SLRLEAGYSLYGHEI-DEKIGPVEAGLMWT--VSLKKPCDFIGKEAILSKKQSGPAQKIV 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARID-KVDHAIKKGMALTV 259
TG + G+ +++ +GT+ + +A+ A +D V + + + L
Sbjct: 289 FFKTGGRRIARPGTEVVSGGAAVGTVVSGTFSPILNEAIGSALVDAAVAKSDELAVDLRG 348
Query: 260 HGVRVKASFPH 270
++ + P
Sbjct: 349 KAFPIERARPP 359
>gi|229543867|ref|ZP_04432926.1| glycine cleavage system T protein [Bacillus coagulans 36D1]
gi|229325006|gb|EEN90682.1| glycine cleavage system T protein [Bacillus coagulans 36D1]
Length = 373
Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 100/288 (34%), Gaps = 54/288 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G ++ FLQ ++T DV L A+ +A+ G + L+ ++ E+ +
Sbjct: 52 SHMGEILVEGPQSLGFLQKMMTNDVSKLKPGAAQYTAMCNEAGGTVDDLLVYQLGENRYW 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------FS 111
L ++ + + L+ ++ +V I + L+
Sbjct: 112 LVVNAANTEKDYKWLVSHR-TEDVSITDISASVAQLALQGPLATEVMQKLAPEADVFSIP 170
Query: 112 NSSFI-DERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
SFI + + + VLL RT E + +K + E
Sbjct: 171 TFSFIENAKVAGCKVLLSRTGYTGEDGFEIYCRSEDALKLWDEILAKGREKGVLPCGLGA 230
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR G+ + I P +A + + L K +IG++ + + + R+
Sbjct: 231 RDTLRFEAGLCLYGQELA-EDISPLEAGIGF--AVKLKKEADFIGKQALLAQKAEGLKRR 287
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARI 244
I +P G + D IGT+ LA+ R+
Sbjct: 288 LAGIEMIGRGIPRHGYSVYAGDERIGTVTTGTQSPTLKKNIGLALLRV 335
>gi|213162146|ref|ZP_03347856.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 82
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFR- 77
Query: 61 EEDTF 65
E D F
Sbjct: 78 ERDGF 82
>gi|228922979|ref|ZP_04086272.1| Aminomethyltransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836612|gb|EEM81960.1| Aminomethyltransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 366
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPTLVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|219670050|ref|YP_002460485.1| glycine cleavage system protein T [Desulfitobacterium hafniense
DCB-2]
gi|254797871|sp|B8FT33|GCST_DESHD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|219540310|gb|ACL22049.1| glycine cleavage system T protein [Desulfitobacterium hafniense
DCB-2]
Length = 365
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 54/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK ++ FLQ ++T DV + + S + T G ++ L+ + + F+
Sbjct: 52 SHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFL 111
Query: 67 LEIDRSK-----------------------------------RDSLIDKLLFYKLRSNVI 91
L ++ S + ++ KL L + +
Sbjct: 112 LVVNASNTDKDFAWMQAQAEGFEISLENRSGDFAQLALQGPWAEKILQKLTSMDL-AQIN 170
Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSF----IDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ ++GV+ ++ F E + G +
Sbjct: 171 YYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + P I P +A + + L K +IG+E +S + + + RK
Sbjct: 231 DTLRFEARLPLYGNELGPD-ITPLEAGLGFF--VKLEKDNFIGKEALSAQKEKGVPRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ + S P+ + EIG + AL + + I + + +
Sbjct: 288 GLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLNKNIALGLIPPEYAQ--IGETLDVI 345
Query: 259 VHGVRVKASF 268
+ G VKA
Sbjct: 346 IRGKAVKARI 355
>gi|118479410|ref|YP_896561.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis str. Al Hakam]
gi|196046283|ref|ZP_03113509.1| glycine cleavage system T protein [Bacillus cereus 03BB108]
gi|225866209|ref|YP_002751587.1| glycine cleavage system T protein [Bacillus cereus 03BB102]
gi|228935548|ref|ZP_04098364.1| Aminomethyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947943|ref|ZP_04110230.1| Aminomethyltransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186469|ref|ZP_04313632.1| Aminomethyltransferase [Bacillus cereus BGSC 6E1]
gi|166221537|sp|A0RIL1|GCST_BACAH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797866|sp|C1ERV0|GCST_BACC3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|118418635|gb|ABK87054.1| aminomethyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|196022753|gb|EDX61434.1| glycine cleavage system T protein [Bacillus cereus 03BB108]
gi|225790883|gb|ACO31100.1| aminomethyltransferase [Bacillus cereus 03BB102]
gi|228596983|gb|EEK54640.1| Aminomethyltransferase [Bacillus cereus BGSC 6E1]
gi|228811930|gb|EEM58264.1| Aminomethyltransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228824086|gb|EEM69902.1| Aminomethyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 366
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|158317892|ref|YP_001510400.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EAN1pec]
gi|158113297|gb|ABW15494.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EAN1pec]
Length = 409
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ + + LRI + PH+ L + L KGCY GQE V+R
Sbjct: 251 AGATPAGLSAFEALRIAARRPRLGRE-TDHRTIPHEVGW-LPAAVHLDKGCYRGQETVAR 308
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
+ + +R +++ + G+P+ + +G +G L + V ++
Sbjct: 309 VHNLGRPPRRMVLLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPA 368
Query: 254 GMALTV---HGVRVKASF 268
L V G +V A+
Sbjct: 369 DAVLVVTDPDGAQVAATI 386
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN+ ++V G + +L ++ + + L + +L+P G I + L+ +
Sbjct: 57 SNRGVLRVTGPERLTWLHSLTSQHLSQLAPGRGTEALVLSPHGHIEHH-LVLADDGTATW 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
++++ L+ L + V VLS
Sbjct: 116 IDVEPGSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAA 159
>gi|325270243|ref|ZP_08136850.1| glycine cleavage system T protein [Prevotella multiformis DSM
16608]
gi|324987544|gb|EGC19520.1| glycine cleavage system T protein [Prevotella multiformis DSM
16608]
Length = 361
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/305 (18%), Positives = 101/305 (33%), Gaps = 67/305 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ I T DV LP + P G ++ I K++E F+
Sbjct: 51 SHMGEVMVSGPEADKYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDEQLFL 110
Query: 67 LEIDRSKRDSLIDKL----LFYKLRSNVIIEI-QPINGVVLSWNQEHTF----------- 110
+ I+ + D + + + NV+IE G + E
Sbjct: 111 MTINAANIDKDMAWIEQNGKGF----NVVIENKSDAYGQLAIQGPEAEEKMEKVLGLACK 166
Query: 111 ------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
I R +G I +K + +
Sbjct: 167 DLKFYEVKQQEKDGEKVIVSRTGYTGEDGFEVYGTPGYI---VKAWDKLMDAGVKPCGLG 223
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G+ + I P A + + + K +IG+E + R + + R+
Sbjct: 224 CRDTLRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGVTRR 280
Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK------VDHAIKKGM 255
R + + G + +P G +L D E+G + + +K VD AIK G
Sbjct: 281 LRGIELEG-NAIPRHGYKVLKDGKEVGEVTT-----GYRLISTEKSCAVALVDAAIKMGD 334
Query: 256 ALTVH 260
++ V
Sbjct: 335 SVEVQ 339
>gi|239637650|ref|ZP_04678622.1| glycine cleavage system T protein [Staphylococcus warneri L37603]
gi|239596868|gb|EEQ79393.1| glycine cleavage system T protein [Staphylococcus warneri L37603]
Length = 363
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 105/310 (33%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D ++
Sbjct: 53 SHMGEIQIQGNDAKSFVQYILSNDTNNLTDSKALYTALCNEEGGIIDDLVTYKLADDNYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124
L ++ + D + + +V ++ + G + + +D S
Sbjct: 113 LVVNAANTDKDFKWIEKHAKSFDVEVKNVSEQYGQLALQGPKARDLMQKLVDIDISEMGM 172
Query: 125 ------------------------------------VLLHRTWGHNEKIASDIKTYHELR 148
V + + + LR
Sbjct: 173 FEFKKDVQLFNKNVILSQSGYTGEDGFEIYCDANDTVAIWEGLLEYDVTPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSSRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G +L D +IG + K++A+A I++ + + + +
Sbjct: 286 VGLELLDKGIARTGYEVLDLDGNQIGEVTSGTKSPSSDKSIALAIINRDAFEMGRELLVQ 345
Query: 259 VHGVRVKASF 268
V +VKA
Sbjct: 346 VRKRQVKAKI 355
>gi|148378696|ref|YP_001253237.1| glycine cleavage system T protein [Clostridium botulinum A str.
ATCC 3502]
gi|148288180|emb|CAL82248.1| aminomethyltransferase [Clostridium botulinum A str. ATCC 3502]
Length = 375
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 64 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 123
Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90
+ ++ K + F+KL+ +V
Sbjct: 124 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 183
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147
++ + + E F I + A L H ++ + + L
Sbjct: 184 LVNGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 239
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 240 RFEASLLLYGNEM-DETITPLEVGMGFFAKLKIEED-FIGKDALIKQKAEGVTRKLVGFE 297
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 298 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 357
Query: 264 VKA 266
+KA
Sbjct: 358 LKA 360
>gi|295706575|ref|YP_003599650.1| glycine cleavage system T protein [Bacillus megaterium DSM 319]
gi|294804234|gb|ADF41300.1| glycine cleavage system T protein [Bacillus megaterium DSM 319]
Length = 366
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/316 (18%), Positives = 108/316 (34%), Gaps = 54/316 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G ++ FLQ +T DV L A+ +A+ G + LI K + ++
Sbjct: 53 SHMGEILVTGADSLAFLQHTMTNDVSALVDGKAQYTAMCYEDGGTVDDLLIYKKADQEYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------QEHTFSNSSFIDE 118
L ++ + + L+ +K + +V + Q L+ Q T N S +
Sbjct: 113 LVVNAANIQKDYEWLVSHK-QGDVTLVNQSDETAQLALQGPVAEKVLQTLTNENLSLLKP 171
Query: 119 RFSIAD--------VLLHRT--------------------WGHNEKIASD-------IKT 143
F+ AD L+ RT W + SD +
Sbjct: 172 -FTFADDVEVANVKALVSRTGYTGEDGFEIYCSSADASHLWTAILEAGSDEGVLPCGLGA 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IG+EV+ + RK
Sbjct: 231 RDTLRFEATLALYGQEL-SKDITPIEARIGF--AVKTNKDSFIGKEVLKEQRESGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + D+ +IG + LA+ + + + + +
Sbjct: 288 VGIEMIDKGIPRHGYEVFADEEQIGFVTTGTQSPTLKKNIGLALLSAEYTELGQEVEVQV 347
Query: 258 TVHGVRVKASFPHWYK 273
++ K +YK
Sbjct: 348 RKKRLKAKVVSTPFYK 363
>gi|153870446|ref|ZP_01999846.1| Glycine cleavage T protein [Beggiatoa sp. PS]
gi|152073082|gb|EDN70148.1| Glycine cleavage T protein [Beggiatoa sp. PS]
Length = 123
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPIL 221
P + G+S KGCY GQE+V+R+Q+ +++R + + PP G +
Sbjct: 6 EEFVPQMVNYQAIGGVSFKKGCYTGQEIVARMQYLGTLKRRMYLARINTNTPPQPGDALY 65
Query: 222 TDDIE--IGTLGVVV-----GKKALAIARIDK 246
++ E +G + G LAI +I
Sbjct: 66 VNNNEQNVGKIVNAQIHPNGGVVVLAIIQISH 97
>gi|229093285|ref|ZP_04224402.1| Aminomethyltransferase [Bacillus cereus Rock3-42]
gi|228690114|gb|EEL43909.1| Aminomethyltransferase [Bacillus cereus Rock3-42]
Length = 366
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 109/309 (35%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + +RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGALRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|182415175|ref|YP_001820241.1| glycine cleavage system T protein [Opitutus terrae PB90-1]
gi|177842389|gb|ACB76641.1| glycine cleavage system T protein [Opitutus terrae PB90-1]
Length = 369
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 99/310 (31%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A FL ++T DV L S + P G ++ L+ E + +
Sbjct: 52 SHMGEVDVHGPDAARFLNRLVTNDVAKLFPGRVLYSPMCYPNGGVVDDLLVYMREPNRYF 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN--------------------- 105
L ++ S + + +V I + + +L+
Sbjct: 112 LCVNASNVAKDLAWMREQASGFDVTITDRSDDYALLAVQGPAAAAIVQSLTGAKLGALGY 171
Query: 106 ---------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
E F + ++A+ LL H ++A +
Sbjct: 172 YHFGEGTVAGVQCLISRTGYTGEDGFELYHAPADAVTLAEALLRAGAPHGLELAG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR+ G + + I P A + + L KG ++G+E + + K
Sbjct: 231 DSLRLEAGYPLYGHELT-AEISPLTAGLGWT--VKLNKGADFVGREPLLAEKTNGAPHKV 287
Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258
TG + + +P+L ++G + +A+ A + +A+
Sbjct: 288 VFFRTGDRRIARAETPVLDGAGQQVGRVLSGTLSPMLNEAIGSALVTTASATPDAPLAVD 347
Query: 259 VHGVRVKASF 268
+ G R+
Sbjct: 348 IRGTRLNLHL 357
>gi|327439694|dbj|BAK16059.1| glycine cleavage system T protein [Solibacillus silvestris StLB046]
Length = 367
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ +LQ +++ D+ + A+ SA+ G ++ L ++E + ++
Sbjct: 53 SHMGEIIVEGPDALVYLQKMLSNDISKIAIGGAQYSALCYEDGGVVDDLLTYRLENNRYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L ++ + + + L + + +V + + ++ +
Sbjct: 113 LCVNAANIEKDFEWLQQH-VEGDVKVANLSDDYAQIALQGPLSQEVLQTLTATDLTAIKY 171
Query: 110 --------FSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTY 144
S + R +G I A+ +
Sbjct: 172 FKFQDNVEVGGHSVLVSRSGYTGEDGFEIYGAPAAIVDLWNKILEAGKDQGVVAAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + L K +IGQ+ + + + RK
Sbjct: 232 DTLRFEACLPLYGQEI-SKEISPLEAGIGF--AVKLAKDPQFIGQQALIDQKENGLTRKS 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + D EIG + LA+ ID + + +
Sbjct: 289 VGIEMIDKGIPRHGYKVFKDGEEIGFVTTGTQSPMTKRNIGLAL--IDAKFTEVGTELEI 346
Query: 258 TVHGVRVKASF 268
V R KA
Sbjct: 347 EVRKNRAKAVV 357
>gi|213023111|ref|ZP_03337558.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 81
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 28/63 (44%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
++ + L + + + G + ++Q +TADV + + +A +GK+ + +
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRE 78
Query: 61 EED 63
+
Sbjct: 79 RDG 81
>gi|153932816|ref|YP_001383080.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A str. ATCC 19397]
gi|153934598|ref|YP_001386629.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A str. Hall]
gi|166221546|sp|A7FRV3|GCST_CLOB1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|152928860|gb|ABS34360.1| glycine cleavage system T protein [Clostridium botulinum A str.
ATCC 19397]
gi|152930512|gb|ABS36011.1| glycine cleavage system T protein [Clostridium botulinum A str.
Hall]
Length = 370
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A F+Q ++T D+ L + + G ++ L+ K ED F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASN 118
Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90
+ ++ K + F+KL+ +V
Sbjct: 119 KDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147
++ + + E F I + A L H ++ + + L
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFAKLKIEED-FIGKDALIKQKAEGVTRKLVGFE 292
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352
Query: 264 VKA 266
+KA
Sbjct: 353 LKA 355
>gi|330685997|gb|EGG97620.1| aminomethyltransferase [Staphylococcus epidermidis VCU121]
Length = 363
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 103/310 (33%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D ++
Sbjct: 53 SHMGEIEIQGNDAKSFVQYILSNDTNNLTDSKALYTALCNEEGGIIDDLVTYKLADDDYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD- 124
L ++ + D + + V ++ + G + + +D S
Sbjct: 113 LVVNAANTDKDFKWIEKHVKSFEVEVKNVSEQYGQLALQGPKARDLMQKLVDIDISEMGM 172
Query: 125 ------------------------------------VLLHRTWGHNEKIASDIKTYHELR 148
V + + + LR
Sbjct: 173 FEFKKDVQLFNKNVILSQSGYTGEDGFEIYCDANDTVAIWEGLLEYDVTPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-----YIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIDDDFIGKSVLKDQKENGSSRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G +L D +IG + K++A+A I++ + + + +
Sbjct: 286 VGLELLDKGIARTGYEVLDIDGNQIGEVTSGTKSPSSDKSIALAIINRDAFEMGRELLVQ 345
Query: 259 VHGVRVKASF 268
V +VKA
Sbjct: 346 VRKRQVKAKI 355
>gi|320533905|ref|ZP_08034483.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133879|gb|EFW26249.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 170
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GISLTKGCYIGQEVVSRIQHRNIIR 201
+ LRI G + + PH+ +D L + LTKGCY GQE ++R +
Sbjct: 3 AWEALRIEAGRPRHARE-ADARAIPHE--LDWLRTAVHLTKGCYPGQETIARTLNLGRPP 59
Query: 202 KRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIARIDKVDHAIKK 253
+R ++ DLP G+ + + +G + V G ALA+ R A+
Sbjct: 60 RRLTVLQLDGLVGDLPRPGATVRMGERTVGAVTSVARHHELGPIALALLR-----RAVPV 114
Query: 254 GMALTVHGVRV 264
G LTV V
Sbjct: 115 GEQLTVEVTEV 125
>gi|52080993|ref|YP_079784.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis ATCC 14580]
gi|52786369|ref|YP_092198.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis ATCC 14580]
gi|319645049|ref|ZP_07999282.1| aminomethyltransferase [Bacillus sp. BT1B_CT2]
gi|81690984|sp|Q65HF9|GCST_BACLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|52004204|gb|AAU24146.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus licheniformis ATCC 14580]
gi|52348871|gb|AAU41505.1| GcvT [Bacillus licheniformis ATCC 14580]
gi|317392858|gb|EFV73652.1| aminomethyltransferase [Bacillus sp. BT1B_CT2]
Length = 364
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 105/311 (33%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G ++PFLQ ++T DV TL A+ +A+ G + L+ K + ++
Sbjct: 50 SHMGEVEITGTDSLPFLQKLLTNDVSTLKEGGAQYTAMCYEDGGTIDDLLVYKKAANVYM 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L I+ + D +D + + ++ +V + +L+
Sbjct: 110 LVINAANIDKDVDWMNKH-IKGDVSVRNVSDEIALLALQGPKAEAILKQVADHDLAELKP 168
Query: 110 --FSNSSFI-----------------------DERFSIADVLLHRTWGHNEKIASDIKTY 144
F + + + +E + LL T + + +
Sbjct: 169 FMFRDDAAVGSVQALVSRTGYTGEDGFEIYCRNEDAACIWKLLLETGKDSGLVPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IG+ V++ + RK
Sbjct: 229 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKTNKASDFIGKAVLASQKEHGADRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
+ +P G + + G + LA+ + + A+ + +
Sbjct: 286 VGLEMIDKGIPRHGYAVYYQGEQAGEVTTGTQSPTLKKNVGLALLKKEAC--ALDTVVEV 343
Query: 258 TVHGVRVKASF 268
+ R+KA
Sbjct: 344 EIRNKRLKAKI 354
>gi|52141267|ref|YP_085561.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
E33L]
gi|196034863|ref|ZP_03102270.1| glycine cleavage system T protein [Bacillus cereus W]
gi|59797682|sp|Q634V6|GCST_BACCZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|51974736|gb|AAU16286.1| aminomethyltransferase [Bacillus cereus E33L]
gi|195992402|gb|EDX56363.1| glycine cleavage system T protein [Bacillus cereus W]
Length = 366
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSNEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|229198354|ref|ZP_04325060.1| Aminomethyltransferase [Bacillus cereus m1293]
gi|301055720|ref|YP_003793931.1| aminomethyltransferase [Bacillus anthracis CI]
gi|228585054|gb|EEK43166.1| Aminomethyltransferase [Bacillus cereus m1293]
gi|300377889|gb|ADK06793.1| aminomethyltransferase [Bacillus cereus biovar anthracis str. CI]
Length = 366
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|89895626|ref|YP_519113.1| hypothetical protein DSY2880 [Desulfitobacterium hafniense Y51]
gi|122482098|sp|Q24TH3|GCST_DESHY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|89335074|dbj|BAE84669.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 365
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 54/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK ++ FLQ ++T DV + + S + T G ++ L+ + + F+
Sbjct: 52 SHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFL 111
Query: 67 LEIDRSK-----------------------------------RDSLIDKLLFYKLRSNVI 91
L ++ + + ++ KL L + +
Sbjct: 112 LVVNAANTDKDFAWMQAQAEGFEISLENRSGDFAQLALQGPWAEKILQKLTSMDL-AQIN 170
Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSF----IDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ ++GV+ ++ F E + G +
Sbjct: 171 YYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + P I P +A + + L K +IG+E +S + + + RK
Sbjct: 231 DTLRFEARLPLYGNELGPD-ITPLEAGLGFF--VKLEKDNFIGKEALSAQKEKGVPRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ + S P+ + EIG + AL + + I + + +
Sbjct: 288 GLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLNKNIALGLIPPEYAQ--IGETLDVI 345
Query: 259 VHGVRVKASF 268
+ G VKA
Sbjct: 346 IRGKAVKARI 355
>gi|313122725|ref|YP_004044652.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
gi|312296207|gb|ADQ69296.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
Length = 368
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 105/306 (34%), Gaps = 48/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S +KV G A + + + DV L A+ S IL +G I+ ++ K ++
Sbjct: 51 SHMSEVKVSGPDATELMNRLTSNDVRELDQGDAQYSCILDQEGIIIDDTVVYKYPDENAY 110
Query: 67 LEID-RSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
L + + ++++ + LR +V + + + V + D
Sbjct: 111 LFVPNAGHGEQMVERWSEHAHRLGLRVSVENKTEELGLVAVQGPDAIEIVEGLSQDPLTS 170
Query: 119 --RFSIA-------DVLLHRTWGHNE-------KIASDIKTYHE--------------LR 148
RFS+ D L+ RT E + + + LR
Sbjct: 171 LARFSMMRTSIAGVDCLVARTGYTGEDGVEIFFAVGDSHEMWDAFSDVPPCGLGSRDTLR 230
Query: 149 INHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ G++ DF P P +A + + + L+K +IGQ+ + + + + +
Sbjct: 231 LEAGLLLSGQDFDPEAEPRTPLEAKLSFV--VDLSKPSFIGQDALETLAETGVDHELVGL 288
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+P G +L D IG + ALA D+ + + +
Sbjct: 289 QLNERGIPRHGYDVLRDGEHIGHVTSGTMSPTLNQPIALAYVNSDEAEENNTVAVKIRDR 348
Query: 261 GVRVKA 266
V
Sbjct: 349 NVPATI 354
>gi|298246105|ref|ZP_06969911.1| glycine cleavage system T protein [Ktedonobacter racemifer DSM
44963]
gi|297553586|gb|EFH87451.1| glycine cleavage system T protein [Ktedonobacter racemifer DSM
44963]
Length = 374
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 101/309 (32%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ KV G A+ FLQ ++ DV L A + + P G + LI + E+ ++
Sbjct: 59 SHMGEFKVEGSDALAFLQYLVPNDVSRLAVGQALYTQLCRPDGTTIDDLLIYHLAEEQYM 118
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------- 109
+ ++ + D + + +NV + Q +++
Sbjct: 119 IVVNAANIDKDYAWIESHAQKFANVTLSNQSDTTALIALQGPLATSILQPLADVKLDEIK 178
Query: 110 ---FSNSSFIDER------------------FSIADVLLHRTWGHNEK----IASDIKTY 144
F+ R S+ L +T K + + +
Sbjct: 179 YYHFAPGQVAGIRCLISRTGYTGEDGFELYYPSVDAARLWQTLLEAGKPQGVLPAGLGAR 238
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR+ + P +A + + L K +IG+ + + + + + ++
Sbjct: 239 DTLRLEAAYCLYGHEL-DDETNPLEAGLGWT--VKLKKSAEFIGRSALQQAKEQGLKKRL 295
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTV 259
I +P SG I + IG L K++ + +D + + + +
Sbjct: 296 VGIELLERGVPRSGYAIYDGEQRIGVLTSGSHGPTVQKSIGLGFVDPAHVSAGTRVQIEI 355
Query: 260 HGVRVKASF 268
G RV A
Sbjct: 356 RGKRVAAQV 364
>gi|328950310|ref|YP_004367645.1| Aminomethyltransferase [Marinithermus hydrothermalis DSM 14884]
gi|328450634|gb|AEB11535.1| Aminomethyltransferase [Marinithermus hydrothermalis DSM 14884]
Length = 354
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 63/306 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + D L A+ S + G ++ + + E +++ ++ +
Sbjct: 56 VRGPEALEFLQYVTLNDAARLKVGRAQYSMLPNANGGVVDDVYLYRTGEREYLMVVNAAN 115
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------NSSFIDER 119
+ L R V +E + +L+ + +S + R
Sbjct: 116 IEKDFAHLAAIAPRYKVELEDASADWALLAVQGPQAEALLAGLVDVPLAEKRKNSVFEAR 175
Query: 120 FSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
+ L RT E + + L + +A
Sbjct: 176 LAGRPARLARTGYTGEDGFEVFVRPEDAPAVWEALLEAGAVPCG---LGARDTLRLEAGF 232
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHR----------------------NIIRKRPMIITGT 210
L G E+ R R+R + +
Sbjct: 233 ALY-----------GHELTDETNPRCTPFAWVVKEHKEFLGKPALLAGDCRERLVGLVLE 281
Query: 211 DDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG--VRV 264
+P +G +L + +G + V +K +A+A +++ + + V G
Sbjct: 282 RGVPRAGYTVLREGRPVGRVTSGTMSPVLRKGIALAYVEEAFAEEGTELLVEVRGKPYPA 341
Query: 265 KASFPH 270
+ P
Sbjct: 342 RVVKPP 347
>gi|333031446|ref|ZP_08459507.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
gi|332742043|gb|EGJ72525.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
Length = 363
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 96/314 (30%), Gaps = 54/314 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FLQ + + DV L + S + QG I+ FL+ K EED ++
Sbjct: 49 SHMGEIWVKGDKALDFLQRVTSNDVSKLQVGKIQYSCFINEQGGIIDDFLVYKYEEDKYL 108
Query: 67 LEIDRS----------------------------------KRDSLIDKLL-------FYK 85
L ++ + K + KL Y
Sbjct: 109 LVVNAANTEKDWKWCVAQNTMGAELENASARMAQLAVQGPKATETLQKLTSINLKDMKYY 168
Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKT 143
+ + E V++S F E + + + +
Sbjct: 169 TFA--VGEFAGAPEVIVSNTGYTGAGGFELYFYPEHAMLIWNAIFEAGKEFDIKPVGLGA 226
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D T P +A + + K +IG+ ++ + + + RK
Sbjct: 227 RDTLRLEMGFNLYGNDM-SDTTTPLEANLGWITKFVEGKD-FIGRSILEKQKAEGVSRKL 284
Query: 204 PMIITGTDDLPPSGSPI-LTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
I +P G I D EIG + + + + + +
Sbjct: 285 IGFILEDRGVPRQGYKICNADGDEIGEVTSGTMSPTRKIGVGMGYVKTEYAALDTEIYIV 344
Query: 257 LTVHGVRVKASFPH 270
+ ++ + P
Sbjct: 345 VRNRKLKARIVKPP 358
>gi|311069059|ref|YP_003973982.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus 1942]
gi|310869576|gb|ADP33051.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus 1942]
Length = 364
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ GK ++ FLQ ++T DV L A+ +A+ P G + LI + + ++
Sbjct: 50 SHMGEVKLTGKDSLSFLQKLMTNDVSKLEPGCAQYTAMCYPDGGTVDDLLIYQKADSHYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
L I+ S + I+ L + +V IE +L+
Sbjct: 110 LVINASNIEKDINWLKEHA-EGDVHIENLSDQLSLLAVQGPEA 151
>gi|42783351|ref|NP_980598.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
ATCC 10987]
gi|217961718|ref|YP_002340288.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
AH187]
gi|222097672|ref|YP_002531729.1| glycine cleavage system aminomethyltransferase t [Bacillus cereus
Q1]
gi|229140961|ref|ZP_04269505.1| Aminomethyltransferase [Bacillus cereus BDRD-ST26]
gi|59797813|sp|Q730W1|GCST_BACC1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711368|sp|B7HNZ1|GCST_BACC7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797867|sp|B9IXL9|GCST_BACCQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|42739279|gb|AAS43206.1| glycine cleavage system T protein [Bacillus cereus ATCC 10987]
gi|217064927|gb|ACJ79177.1| glycine cleavage system T protein [Bacillus cereus AH187]
gi|221241730|gb|ACM14440.1| glycine cleavage system T protein [Bacillus cereus Q1]
gi|228642537|gb|EEK98824.1| Aminomethyltransferase [Bacillus cereus BDRD-ST26]
gi|324328139|gb|ADY23399.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 366
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPVEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|296185700|ref|ZP_06854109.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|296049828|gb|EFG89253.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 380
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/315 (17%), Positives = 100/315 (31%), Gaps = 51/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F
Sbjct: 52 SHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYFY 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121
L I+ D ++ +K +V II I P + ++
Sbjct: 112 LVINAGNIDKDFKWMMDHKDNLDVDIINISPDICEFAIQGPKAQMILQKVVNIDLENIKF 171
Query: 122 ----------IADVLLHRTWGHNEK-------IASDIKTY-------------------- 144
D ++ RT E +
Sbjct: 172 FYCERNVKVNNVDCMISRTGYTGEDGFEIFCNAKDGESIWVKLLEVGKDDGLIPVGLGCR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P +A + + L + +IG+E + + + + + RK
Sbjct: 232 DTLRFEACLPLYGNELT-EDISPLEAGIGFF--VKLNEDEFIGKEALMKQKSQGLKRKIA 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G + + EIG + LA+ + D + + +
Sbjct: 289 GFEMKDRGIPRHGYKVQVNGEEIGFVTTGYKSPSLNKNIGLALIKSDYAALGKEIEIIIR 348
Query: 259 VHGVRVKASFPHWYK 273
G + + +YK
Sbjct: 349 NKGAKAEIIDKKFYK 363
>gi|255528029|ref|ZP_05394865.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|255508268|gb|EET84672.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 370
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/315 (17%), Positives = 100/315 (31%), Gaps = 51/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V GK A+ F+Q IIT D TL A S + G + L+ K +D F
Sbjct: 52 SHMGEVEVKGKDALKFVQNIITNDASTLENNQALYSPMCYENGGTVDDILVYKYADDYFY 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNV-IIEIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121
L I+ D ++ +K +V II I P + ++
Sbjct: 112 LVINAGNIDKDFKWMMDHKDNLDVDIINISPDICEFAIQGPKAQMILQKVVNIDLENIKF 171
Query: 122 ----------IADVLLHRTWGHNEK-------IASDIKTY-------------------- 144
D ++ RT E +
Sbjct: 172 FYCERNVKVNNVDCMISRTGYTGEDGFEIFCNAKDGESIWVKLLEVGKDDGLIPVGLGCR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P +A + + L + +IG+E + + + + + RK
Sbjct: 232 DTLRFEACLPLYGNELT-EDISPLEAGIGFF--VKLNEDEFIGKEALMKQKSQGLKRKIA 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G + + EIG + LA+ + D + + +
Sbjct: 289 GFEMKDRGIPRHGYKVQVNGEEIGFVTTGYKSPSLNKNIGLALIKSDYAALGKEIEIIIR 348
Query: 259 VHGVRVKASFPHWYK 273
G + + +YK
Sbjct: 349 NKGAKAEIIDKKFYK 363
>gi|86610075|ref|YP_478837.1| aminomethyltransferase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558617|gb|ABD03574.1| aminomethyltransferase, putative [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 322
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 106/306 (34%), Gaps = 64/306 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ------------------ 48
S +++ G + +L T ++ L + +TP
Sbjct: 17 SGWGRLRMKGSPGLDYLHNRSTQNLKALQPGQGADTVFVTPTAGILDLATVYAGEEDCWI 76
Query: 49 --------------GKILLYFLISKIEEDT-----FILEIDRSKR--------DSLIDKL 81
G++L ++++++T F L +S+ + + +L
Sbjct: 77 WTSPQRRSLLMQSLGRMLPLVRGAQLKDETDQTFGFGLLGPQSQALLEQVVSSEEIPTRL 136
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
+ V I+ P++ + + F+ ID++ ++ + LL
Sbjct: 137 NEHCA---VEIQGIPVHLACGTGLAQPGFTLWGTIDQKVALEECLLQAGAKLAPP----- 188
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ + LR+ G + + S P +A + +SL KGCY+GQEV+++ IR
Sbjct: 189 ELWEVLRLEAGRPAADRELT-SDYNPLEAGL--WRAVSLDKGCYVGQEVLAKQVTYQRIR 245
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
+ I + P G+ IL +IG L G L R +G+ +
Sbjct: 246 QTLWGIRLQGEAHP-GTEILRQGEKIGLLTSAGLTSQGYLGLGYVRT---KFDPAEGLEV 301
Query: 258 TVHGVR 263
V
Sbjct: 302 EVGSAP 307
>gi|294657445|ref|XP_459753.2| DEHA2E10318p [Debaryomyces hansenii CBS767]
gi|218511960|sp|Q6BPW7|CAF17_DEBHA RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|199432698|emb|CAG87991.2| DEHA2E10318p [Debaryomyces hansenii]
Length = 462
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 64/191 (33%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R +G+ + S++ P + +DL NG+SL KGCY+GQE+ R + IIRKR +
Sbjct: 269 RRRFMNGLFETQDSPKESSLLPFEMNLDLTNGLSLEKGCYVGQELTIRTYNNGIIRKRIV 328
Query: 206 IITGTD-----------------------------------------------DLPPS-- 216
I + D PP
Sbjct: 329 PIQFFEINDDNLSALDESEYLTLDPNDPVIRELQDLHSSTLSKLEITPLIEKKDSPPPEP 388
Query: 217 ---GSPILTDDIEI-------GTLGVVVGKKALAIARIDKVD--HAIKKGMALTVHGVR- 263
S + + G L + +A + ++ K + GV+
Sbjct: 389 EQQSSSPFANSKPVRRRTASSGKLLSIQDNLGFVLANLSDIENVDLYKIELPCLEGGVKH 448
Query: 264 --VKASFPHWY 272
+K P W+
Sbjct: 449 VGIKVFKPEWW 459
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 57/168 (33%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITA-------------------------------- 29
S + N+S +++ G A FL + T+
Sbjct: 6 SGISALNRSLLQIKGPDATKFLNGLSTSRFLPNIVKKKQHTIDEAENRHAKLSEIININD 65
Query: 30 -------DVLTLPYK-----IARGSAILTPQGKILLYFLIS-------------KIEEDT 64
D+ S L+ +G+++ + +I E T
Sbjct: 66 NWGLMHEDIYDPDNNIFVRRDGLNSMFLSSKGRVVTDCFLYSQPFHNLNGTFEGQISEPT 125
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+++EID S L L +KL + V IE +N F
Sbjct: 126 YLIEIDSSFTSQLQMLLKLHKLSAKVSIETIKSMHSYYYYNDTAEFDE 173
>gi|218899387|ref|YP_002447798.1| glycine cleavage system T protein [Bacillus cereus G9842]
gi|228902740|ref|ZP_04066887.1| Aminomethyltransferase [Bacillus thuringiensis IBL 4222]
gi|228910060|ref|ZP_04073880.1| Aminomethyltransferase [Bacillus thuringiensis IBL 200]
gi|228967267|ref|ZP_04128303.1| Aminomethyltransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|226711366|sp|B7IXL4|GCST_BACC2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218541578|gb|ACK93972.1| glycine cleavage system T protein [Bacillus cereus G9842]
gi|228792636|gb|EEM40202.1| Aminomethyltransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228849577|gb|EEM94411.1| Aminomethyltransferase [Bacillus thuringiensis IBL 200]
gi|228856927|gb|EEN01440.1| Aminomethyltransferase [Bacillus thuringiensis IBL 4222]
Length = 366
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K ++N++++ P + E F ++ + + LL A +
Sbjct: 172 KFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|150397398|ref|YP_001327865.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
gi|150028913|gb|ABR61030.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
Length = 815
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 58/314 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A+ FLQ + ++ + + +L +G I +++ E F
Sbjct: 490 MTSFGKIRVEGRDALAFLQRLCANEMD-VEPGRVVYTQMLNARGGIESDLTVTRFSESAF 548
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSW-----------------NQ 106
L + + + L + LR V+ ++ V+ N+
Sbjct: 549 FLVVPGATLQRDLSWLRRH-LRDEFVVVTDVTAAESVLCVMGPKARDLMQKVSPNDFSNE 607
Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147
H F + R + L + ++ A +T
Sbjct: 608 AHPFGTAREIEVGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLEAAGADAGLRLCGL 667
Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI D +A + + KG +IG+E V + + + R
Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKSAKGEFIGREAVLAKRDKGLSR 724
Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA--IK 252
+ ++ + L I+ D +GT+ G L A +
Sbjct: 725 RLLQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVPCQGEGEADVLA 784
Query: 253 KGMALTVHGVRVKA 266
G + + G RVKA
Sbjct: 785 SGYEIEIAGTRVKA 798
>gi|315658188|ref|ZP_07911060.1| glycine cleavage system T protein [Staphylococcus lugdunensis
M23590]
gi|315496517|gb|EFU84840.1| glycine cleavage system T protein [Staphylococcus lugdunensis
M23590]
Length = 363
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 108/310 (34%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A F+Q +++ D L A+ +A+ +G ++ +I K+E + ++
Sbjct: 53 SHMGEIAIKGNDASKFVQYLLSNDTNNLTDNKAQYTALCNEEGGVIDDLVIYKLENNDYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + D + + +V + + G + + S +D S
Sbjct: 113 LIVNAANTDKDFTWIEKQSSKFDVTVSNVSDKYGQLAIQGPKARDLVSQLVDIDVSEMKP 172
Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148
V + ++ + + LR
Sbjct: 173 FEFKQNVKLLGKNVILSQSGYTGEDGFEIYCDINDTVDIWNGLLEHDVVPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGITFAAKPLIEEDFIGKSVLKDQKENGSKRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
+ + +G ++ D IG + K++A+A I++ + + + + +
Sbjct: 286 VGLELLEKGIARTGYEVMDLDGNVIGEVTSGTQSPTSGKSIALAIINRDEFEMGRELLVQ 345
Query: 259 VHGVRVKASF 268
V ++KA
Sbjct: 346 VRKRQLKAKI 355
>gi|119387638|ref|YP_918672.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222]
gi|119378213|gb|ABL72976.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222]
Length = 815
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 57/320 (17%), Positives = 101/320 (31%), Gaps = 59/320 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + D+ +P + +L +G I ++++ E F
Sbjct: 489 MTSFGKIRVEGRDAASFLQRLCANDMD-VPAGRIVYTQMLNARGGIESDLTVTRLSETAF 547
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
+L + + + L + V I VVL N+
Sbjct: 548 LLVVPGATLQRDLAWLRRHLGDEWVTITDITAAEVVLPLMGPRSRELLSLVSPGDFSNEA 607
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
H F + R + L + ++ A + E
Sbjct: 608 HPFGTAREIEIGMGLARAHRVTYVGELGWELYVPTDQAAHVFEALAEAGEQVGLKLCGLH 667
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI D +A + + KG +IG+E V + + + R+
Sbjct: 668 AMDSCRIEKAYRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGREAVLKKREAGLERR 724
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA--------RIDK-VDHAIK 252
+ + L PIL D +G L AL+ A R D+ +
Sbjct: 725 LVQFRLRDPEPLLFHNEPILRDGRIVGFLSSGNYGHALSAAIGLGYVPCRTDETAAEMLA 784
Query: 253 KGMALTVHG--VRVKASFPH 270
A+ V G V +AS
Sbjct: 785 SDYAIDVAGRIVPAEASLAP 804
>gi|47567783|ref|ZP_00238491.1| glycine cleavage system T protein [Bacillus cereus G9241]
gi|47555460|gb|EAL13803.1| glycine cleavage system T protein [Bacillus cereus G9241]
Length = 366
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F ++ + + LL K +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCG-LGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEAKLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|126661608|ref|ZP_01732637.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece
sp. CCY0110]
gi|126617105|gb|EAZ87945.1| Glycine cleavage T protein (aminomethyl transferase) [Cyanothece
sp. CCY0110]
Length = 212
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ +LRI G P+ + P +A + + IS KGCYIGQE ++R+ +++R
Sbjct: 78 WQQLRIKQGRPYPDQELT-EDYNPLEAGL--WSTISFDKGCYIGQETIARLNTYQGVKQR 134
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTV 259
+ + +G I DD ++G L + LA + +K + T
Sbjct: 135 LWGVKLNQPV-QTGHTITVDDKKVGILTSSAQVENECFGLAYVKTKVGGEGLKVNIGDTT 193
Query: 260 HGV 262
+
Sbjct: 194 GEL 196
>gi|170754781|ref|YP_001780325.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum B1 str. Okra]
gi|229807548|sp|B1IEV3|GCST_CLOBK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169119993|gb|ACA43829.1| glycine cleavage system T protein [Clostridium botulinum B1 str.
Okra]
Length = 370
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 55/306 (17%), Positives = 109/306 (35%), Gaps = 48/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A F+Q ++T D+ L + + G ++ L+ K E+ F
Sbjct: 52 SHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAENEFF 111
Query: 67 LEIDRSKRDSLIDKLLFYK---------------------------LRSNVIIEIQPI-- 97
L I+ S +D + ++ +K L+ V I++Q I
Sbjct: 112 LVINASNKDKDVKWIMDHKGDFDVEIVDESDSIAQLALQGPLAEEILQKIVDIDLQEIKF 171
Query: 98 ----NGVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTW--GHNEKIAS-DIKTY 144
V+++ + ++ F I A L H G E + +
Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGVQPIGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR ++ + TI P + M + + + +IG++ + + + + RK
Sbjct: 232 DTLRFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349
Query: 261 GVRVKA 266
+KA
Sbjct: 350 KKELKA 355
>gi|153939527|ref|YP_001390043.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum F str. Langeland]
gi|166221547|sp|A7GB83|GCST_CLOBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|152935423|gb|ABS40921.1| glycine cleavage system T protein [Clostridium botulinum F str.
Langeland]
gi|295318127|gb|ADF98504.1| glycine cleavage system T protein [Clostridium botulinum F str.
230613]
Length = 370
Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 56/303 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A F+Q ++T D+ L + + G ++ L+ K D F L I+ S
Sbjct: 59 VTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAGDEFFLVINASN 118
Query: 73 ----------------------------------KRDSLIDK--------LLFYKLRSNV 90
+ ++ K + F+KL+ +V
Sbjct: 119 KDKDVKWIMGHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---DIKTYHEL 147
+++ + + E F I + A L H ++ + + L
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFE----IYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTL 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R ++ + TI P + M + + + +IG++ + + + I RK
Sbjct: 235 RFEASLLLYGNEM-DETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGITRKLVGFE 292
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 293 LLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKKE 352
Query: 264 VKA 266
+KA
Sbjct: 353 LKA 355
>gi|172056926|ref|YP_001813386.1| glycine cleavage system T protein [Exiguobacterium sibiricum
255-15]
gi|229807549|sp|B1YLN6|GCST_EXIS2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|171989447|gb|ACB60369.1| glycine cleavage system T protein [Exiguobacterium sibiricum
255-15]
Length = 360
Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 54/304 (17%), Positives = 112/304 (36%), Gaps = 48/304 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A+ FLQ ++ D+ + A+ + + G + L+ +++E ++
Sbjct: 53 SHMGELFVSGSDALAFLQQTLSNDISKIAIGQAQYNVLCQEDGGTVDDLLVYRLDEQDYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-PINGVVLSWN-------QEHTF-------- 110
L ++ S + L Y L +V++E Q G + QE T
Sbjct: 113 LVVNASNIEKDEAHLRQY-LTGDVLLENQSDAYGQIAVQGPKAVEVLQELTALKLEDIKF 171
Query: 111 ---------------SNSSFIDER-----FSIADV-LLHRTWGHNEKIASDIKTYHELRI 149
S S + E AD + + + + LR
Sbjct: 172 FRFAQGELAGVEMLVSRSGYTGEDGFELYMPSADASAVWNALLEADVVPCGLGARDTLRF 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ + +TI P +A M + ++G EV+ + + R++ + +
Sbjct: 232 EACLPLYGHEL-SATISPIEAGMGF--AVKPQVKSFVGSEVLVKQKEDG-PRRQLIGLEL 287
Query: 210 TD-DLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
TD + +P+L + IG + KA+A+A + ++A ++ + V G ++
Sbjct: 288 TDKGIARQDAPVLVNGETIGFVTTGTLPPTIGKAIALA-LVPTEYATEETFEIEVRGKKL 346
Query: 265 KASF 268
A
Sbjct: 347 AAKR 350
>gi|330950068|gb|EGH50328.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
syringae Cit 7]
Length = 78
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
L+++ + V G A FLQ +T ++ L + A T +G++ F I +
Sbjct: 10 CTLTHEGVLAVRGVDASKFLQGQLTCNLNYLNEDKSSLGARCTQKGRMQSSFRIVFEGDG 69
Query: 64 TFI 66
+
Sbjct: 70 CLL 72
>gi|228941386|ref|ZP_04103938.1| Aminomethyltransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974319|ref|ZP_04134888.1| Aminomethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980911|ref|ZP_04141215.1| Aminomethyltransferase [Bacillus thuringiensis Bt407]
gi|228778847|gb|EEM27110.1| Aminomethyltransferase [Bacillus thuringiensis Bt407]
gi|228785369|gb|EEM33379.1| Aminomethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818312|gb|EEM64385.1| Aminomethyltransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942007|gb|AEA17903.1| glycine cleavage system aminomethyltransferase T [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 366
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ + E F ++ + + LL A +
Sbjct: 172 KFKNDILVDGISALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE-VGAEEGLKACGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|289550692|ref|YP_003471596.1| Aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus lugdunensis HKU09-01]
gi|289180224|gb|ADC87469.1| Aminomethyltransferase (glycine cleavage system T protein)
[Staphylococcus lugdunensis HKU09-01]
Length = 363
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 108/310 (34%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A F+Q +++ D L A+ +A+ +G ++ +I K+E + ++
Sbjct: 53 SHMGEIAIKGNDASKFVQYLLSNDTNNLTDNKAQYTALCNEEGGVIDDLVIYKLENNDYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + D + + +V + + G + + S +D S
Sbjct: 113 LIVNAANTDKDFTWIEKQSSKFDVTVSNVSDKYGQLAIQGPKARDLVSQLVDIDVSEMKP 172
Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148
V + ++ + + LR
Sbjct: 173 FEFKQNVKLLGKNVILSQSGYTGEDGFEIYCDINDTVDIWNGLLEHDVVPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSKRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
+ + +G ++ D IG + K++AIA I++ + + + + +
Sbjct: 286 VGLELLEKGIARTGYEVMDLDGNVIGEVTSGTQSPTSGKSIAIAIINRDEFEMGRELLVQ 345
Query: 259 VHGVRVKASF 268
V ++KA
Sbjct: 346 VRKRQLKAKI 355
>gi|315426905|dbj|BAJ48525.1| glycine cleavage system aminomethyltransferase [Candidatus
Caldiarchaeum subterraneum]
Length = 360
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 94/299 (31%), Gaps = 56/299 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G A FLQ ++T DV L + IL G I+ + K+ +D++++ +
Sbjct: 55 KISGPHATKFLQEVLTIDVEKLKPGRMKYGLILNMDGGIIDDVTVYKVTDDSYLMVSNAL 114
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-----------------------T 109
R ++ L K+ V++E + + H T
Sbjct: 115 TRVRVLGWL-REKMDGEVLVEDITESSAFFAVQGPHSSSYVSSLVGAVSGFKWFEGGFRT 173
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGI 153
+ + R + + K + RI G
Sbjct: 174 VDDCRLLVTRSGYTGGDGYELMTLCGEEQLYEKVWSFFTEKGVRPCGLACRDVCRIEAGF 233
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
DF P +A + + + K +IG+E + + Q ++K +I +
Sbjct: 234 PLYGQDF-DEKNDPLEAGL--FWAVKMDKPFFIGKEALEKKQATGPVKKLSLIEMVDQGV 290
Query: 214 PPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
P G + D+E G + + + +A + +L V G V
Sbjct: 291 PRPGYKVYVGDVEAGVVTSGCLSPMINRGVCLAYL---------PPSLQVDGYEVYVDV 340
>gi|294501228|ref|YP_003564928.1| glycine cleavage system T protein [Bacillus megaterium QM B1551]
gi|294351165|gb|ADE71494.1| glycine cleavage system T protein [Bacillus megaterium QM B1551]
Length = 366
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 103/314 (32%), Gaps = 50/314 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G ++ FLQ +T DV TL A+ +A+ G + LI K + ++
Sbjct: 53 SHMGEILVTGADSLAFLQHTMTNDVSTLVDGKAQYTAMCYEDGGTVDDLLIYKKADQEYL 112
Query: 67 LEIDRSKRDSLIDKLLFYK---------------------LRSNVIIEIQPINGVVL--- 102
L ++ + + L+ +K + V+ + N +L
Sbjct: 113 LVVNAANIQKDYEWLVSHKQGDVMLVNQSDETAQLALQGPVAEKVLQTLTNENLSLLKPF 172
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASD-------IKTYH 145
++ + +N + R W + SD +
Sbjct: 173 TFADDVEVANVKALVSRTGYTGEDGFEIYCSSADASHLWTAILEAGSDEGVLPCGLGARD 232
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR + + I P +A + + K +IG+EV+ + RK
Sbjct: 233 TLRFEATLALYGQEL-SKDITPIEARIGF--AVKTNKDSFIGKEVLKEQRESGAPRKLVG 289
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259
I +P G + D+ +IG + LA+ + + + + +
Sbjct: 290 IEMIDKGIPRHGYEVFADEEQIGFVTTGTQSPTLKKNIGLALLSAEYSELGREVEVQVRK 349
Query: 260 HGVRVKASFPHWYK 273
++ K +YK
Sbjct: 350 KRLKAKVVSTPFYK 363
>gi|229592286|ref|YP_002874405.1| putative glycine cleavage system protein T [Pseudomonas fluorescens
SBW25]
gi|229364152|emb|CAY51794.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens SBW25]
Length = 374
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/310 (16%), Positives = 100/310 (32%), Gaps = 51/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +A L+ ++ D++ LP + R + QG IL +++ + D
Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNAQGGILDDLMVANLGNDELF 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + + IE +L+ + + +
Sbjct: 115 LVVNAACKDQDLAHLRQH-IGDQCSIEPLFEERALLALQGPAAVKVLARLAPEVTQMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L E A + LR+
Sbjct: 174 QFASLRLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D NTD P A+ G + G + + Q + RKR
Sbjct: 234 EAGLCLYGHDMNTDTTPIEASLLWAISKARRADGPRAGGFPGADTIFTQQQAGVSRKRVG 293
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ D IG++ G LA+ +D A+ ++
Sbjct: 294 LLPQERTPVREGAEIVDADGTVIGSVCS--GGFGPTLGGPLAMGYLDSAFIALDTEVSAL 351
Query: 259 VHGVRVKASF 268
V G +V
Sbjct: 352 VRGKKVPLRV 361
>gi|196041531|ref|ZP_03108823.1| aminomethyltransferase [Bacillus cereus NVH0597-99]
gi|196027519|gb|EDX66134.1| aminomethyltransferase [Bacillus cereus NVH0597-99]
Length = 366
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRD------------------------------------------SLIDKLLFY 84
L I+ S + + ++ F+
Sbjct: 112 LVINASNIEKDYEWLASHVIGDAKVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
K +++++++ P + E F E + L +
Sbjct: 172 KFKNDILVDGIPALVSRTGYTGEDGFEIYC-KSEGAAKLWEKLLEVGAEEGLKPCGLGAR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+ + + RK
Sbjct: 231 DTLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKPNKEADFFGKATLKEQKENGAPRKL 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 288 VGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEI 347
Query: 260 HGVRVKASF 268
RVKA
Sbjct: 348 RNKRVKAVV 356
>gi|212638758|ref|YP_002315278.1| glycine cleavage system aminomethyltransferase T [Anoxybacillus
flavithermus WK1]
gi|226711364|sp|B7GH71|GCST_ANOFW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|212560238|gb|ACJ33293.1| Glycine cleavage system protein T (aminomethyltransferase)
[Anoxybacillus flavithermus WK1]
Length = 364
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V GK ++ FLQ ++T DV L A+ + + G + L+ K +D ++
Sbjct: 50 SHMGEFEVKGKDSVAFLQKMMTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADDHYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L ++ + + L + + +V + + L+ T
Sbjct: 110 LVVNAANIEKDFAWLSEHVV-GDVELVNISNDIAQLALQGPLAEKVLQQLTTVDLSTMKF 168
Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144
+F D R A L ++ + +
Sbjct: 169 FAFADHVDVAGVQTLVSRTGYTGEDGFELYCRAEDAPTLWRAILEAGKEEGVLPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K + G+E++ + + R+
Sbjct: 229 DTLRFEACLPLYGQELAKD-ITPIEAGLGF--AVKTNKDVDFFGKEILKKQKEEGAPRRL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I + G + ++ +IG + LA+ I ++ + +
Sbjct: 286 VGIEMIDKGIARHGYAVYVNNEQIGFVTTGTQSPTLKKNIGLAL--ISTAFSSLDTEVEV 343
Query: 258 TVHGVRVKASF 268
V G R+KA
Sbjct: 344 DVRGKRLKARV 354
>gi|313497352|gb|ADR58718.1| GcvT [Pseudomonas putida BIRD-1]
Length = 373
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L++++ D++ LP + R + QG IL +++ + +DT
Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + +D + L + ++ +Q V + + +F+
Sbjct: 114 LVVNAACKDQDLAHLQSHIGNRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R + AD L R E + LR+
Sbjct: 174 FRRVTLLEVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206
G+ D T +L+ ++ + G + G E + Q + RKR +
Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRADGARAAGFPGAEAIFTQQRDGVARKRVGL 293
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ +D +G + G +A+ ID A+ + V
Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLGAPVAMGYIDSEHSALDTPLFAVV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKKVALKV 360
>gi|154249658|ref|YP_001410483.1| glycine cleavage system aminomethyltransferase T [Fervidobacterium
nodosum Rt17-B1]
gi|154153594|gb|ABS60826.1| glycine cleavage system T protein [Fervidobacterium nodosum
Rt17-B1]
Length = 430
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 86/257 (33%), Gaps = 46/257 (17%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ F ++T D ++ Y +A+ G + L+ KI + + ++ + D
Sbjct: 127 GPDAVKFANYVVTNDFGSINYGDIIYTAMCNENGGFVDDLLVYKIAPEEVMFVVNAANID 186
Query: 76 SLIDKLLFYKLRSNVIIE---IQPINGVVLSWN---QEHTFSNSSF-------------- 115
+ LL KL ++ I G++ QE + +F
Sbjct: 187 KDFNHLL--KLSEKFNVKLTNISDETGLIAVQGPKAQEKIQPHVNFDLEEIGYYSFKKGE 244
Query: 116 ------IDERFSIADV-------------LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
I R + R + + LR+ G++
Sbjct: 245 IFGVRGIISRTGYTGEDGFELYIPANQTSFVWRKLLEIGVKPAGLGARDVLRLEAGLLLY 304
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D TI P +A + + KG + G+EV+ + + +++R + L P
Sbjct: 305 GNDM-DDTITPLEASIPW--AVKFEKGDFFGKEVLLKQKEEG-LKRRLRGLVIEGKLVPR 360
Query: 217 GS-PILTDDIEIGTLGV 232
+ + D +IG +
Sbjct: 361 HNMEVYKDGQKIGYVTS 377
>gi|148546266|ref|YP_001266368.1| glycine cleavage system T protein [Pseudomonas putida F1]
gi|148510324|gb|ABQ77184.1| glycine cleavage system T protein [Pseudomonas putida F1]
Length = 373
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L++++ D++ LP + R + QG IL +++ + EDT
Sbjct: 54 SHMGQIVLRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + ++ + L + ++ +Q V + + +F+
Sbjct: 114 LVVNAACKEQDLAHLQSHIGNRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R + AD L R E + LR+
Sbjct: 174 FRRVTLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206
G+ D T +L+ ++ + +G + G E + + RKR +
Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRAEGARAASFPGAETIFAHVRDGVARKRVGL 293
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ +D +G + G +A+ ID A+ + V
Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLAAPVAMGYIDSEHAALDTALFAVV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKKVALKV 360
>gi|300932485|ref|ZP_07147741.1| putative aminomethyltransferase [Corynebacterium resistens DSM
45100]
Length = 427
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+++ I V G+ A +L +I+ + + A +L QG++ F I+ + D +L
Sbjct: 52 DRTAILVKGEEAHTWLNDLISQKINAINTGQATYGLLLDVQGRVTHQFGIAALP-DGILL 110
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN 98
+ L D L + V +EI P+
Sbjct: 111 DCPSRHAAGLADYLTKMIFWAKVEVEILPLA 141
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 30/157 (19%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALM------------------DLLNGISLTKGC 184
Y LRI I + D PH+A + + KGC
Sbjct: 249 AYDALRIAARIPEVGID-TDEKTIPHEAAFFTGPRTAQATTLGSVSDGPTAYAVHMNKGC 307
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV-----GK 236
Y GQE VSR+Q+ + +++ LP GS + IG +G G
Sbjct: 308 YRGQETVSRVQNLGKPPRVLVLLHLDGSANRLPAVGSDFTAEGKTIGRVGSSAHDGDLGP 367
Query: 237 KALAIAR---IDKVDHAIKKGMALTVHGVRVKASFPH 270
ALA+ + ++K+ + AL GV
Sbjct: 368 IALALVKRGIVEKLASNPQSAPALQADGVDAAIDPAD 404
>gi|284167360|ref|YP_003405638.1| glycine cleavage system protein T [Haloterrigena turkmenica DSM
5511]
gi|284017015|gb|ADB62965.1| glycine cleavage system T protein [Haloterrigena turkmenica DSM
5511]
Length = 366
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/308 (19%), Positives = 110/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEEDTF 65
S+ S + V G A + + T DV TL A+ S IL +G IL ++ + + D +
Sbjct: 51 SHMSEVVVTGPDATAIMDRLTTNDVQTLDSGDAQYSCILDEEGVILDDTVVYRYPDGDGY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQ-PINGVVLSWNQEH------------ 108
+ + + + ++ Y S V +E Q G+V +
Sbjct: 111 LFVPNAGHGEQMAERWSQYA--SEFGLSVTVENQTDSTGLVAVQGPDSVETVEAVTSDPV 168
Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEK------IASDIKT-YHE-------------- 146
S S+ + + + RT E ASD + +
Sbjct: 169 GELSQFSWRQTEIAAVECHVARTGYTGEDGYEIFFPASDSEAVWEAFEDIQPCGLGARDT 228
Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ DF P P +A + + + L+K ++G+E + ++ + +
Sbjct: 229 LRLEAGLLLSGQDFDPEDEPRTPLEAGLGFV--VDLSKDEFVGRETLQDLEEAGVEERMV 286
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260
I + G IL D EIG + L A+ ++ + + V
Sbjct: 287 GIRIDERAIARHGYSILADGTEIGHVTSGTMGPTLNVPIALGYVETPFAETGTEIEVEVR 346
Query: 261 GVRVKASF 268
G V+A+
Sbjct: 347 GEPVEATV 354
>gi|119505788|ref|ZP_01627855.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080]
gi|119458355|gb|EAW39463.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080]
Length = 394
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 62/274 (22%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A +L ++T +V L + G+++ I ++ E F L
Sbjct: 66 RITGPDAEAYLNRMVTRNVSKLGINRVGYAVWCNDAGQVMDDGTIFRLGEQDFRL-CSYQ 124
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------------ 108
+ D + L +V I + + L+
Sbjct: 125 RADDWLAWCT---LGFDVTITNESEDLAGLAVQGPTSCTILTLLGCTGLDQLKPFGIAHF 181
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL--------------------R 148
TF + + R L + W A + +L R
Sbjct: 182 TFEGAPMMVSRTGFTGDLGYEVWV---APAQAEALWDQLFEHGREYLIKPIGSYALDMAR 238
Query: 149 INHGIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
I G + + DF+P+ P + ++ L + +K + G+ + + +
Sbjct: 239 IEAGFIQAHVDFVPAEEVVRNGRTRSPFELGLEWL--VDFSKPLFNGRSALLAEKAKGS- 295
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R R ++ + P S I+ D +GT+
Sbjct: 296 RYRFAMLDIEGNKPAEHSFIMKGDKVVGTVTSAA 329
>gi|241953047|ref|XP_002419245.1| mitochondrial protein, putative [Candida dubliniensis CD36]
gi|223642585|emb|CAX42834.1| mitochondrial protein, putative [Candida dubliniensis CD36]
Length = 469
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R +G+ + S++ P + +D +NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 RRRFQNGLFEIQDAPKGSSLLPFECNLDYINGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333
Query: 206 IITG 209
+
Sbjct: 334 PVQF 337
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 57/160 (35%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29
++S IK+ G A FL ++T+
Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSQNYGLMH 71
Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70
D+ Y S IL +G+++ + I E ++LE+D
Sbjct: 72 EDIYDPDYNITISRDGVNSMILNSKGRVVTDCFLYPDPFHNVDGTFQESINEPGYLLEVD 131
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
+S L+ L +KL + V I ++ TF
Sbjct: 132 KSISQQLMMILKLHKLSAKVDIIPDKKLHSYYYYDDTSTF 171
>gi|196230599|ref|ZP_03129461.1| glycine cleavage system T protein [Chthoniobacter flavus Ellin428]
gi|196225529|gb|EDY20037.1| glycine cleavage system T protein [Chthoniobacter flavus Ellin428]
Length = 349
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 60/313 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ G A+ +L ++T +V L + + +L G ++ ++ +I E+ ++
Sbjct: 33 SHMGQFFAEGPGALAWLNGLLTNNVERLAVGECQYTFLLNDGGGVIDDLIVYRIGEENYL 92
Query: 67 LEIDRSKRDSLIDKLL------------------------------------FY------ 84
L ++ K D + Y
Sbjct: 93 LVVNAGKIDEDFAWMKSHLAPGVDFQNRSADFAGLAVQGPRSAQLFDAFFQGKYSRPARN 152
Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
LR+ +I+ + + E F + R + + R + +
Sbjct: 153 EILRA--VIDDETYFIARTGYTGEDGFEVFCVAN-RAVKSWNDILRKGAEFDIKPCGLGA 209
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ +D LP T P +A + + + L K +IG++ +++ + +++R
Sbjct: 210 RDTLRLEMCYPLNGSDLLPDTT-PIEAGLSIF--VDLQKPNFIGKDALTKQRQEG-VKRR 265
Query: 204 PMIITGTDDLPPSGS--PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
+ T+ PP S + D +I +A + I + +
Sbjct: 266 LVPFKMTETCPPPRSHYAVYKGDKKIAETTSGTLSPTLKVGIGMAYIPTEFAR--INEQI 323
Query: 256 ALTVHGVRVKASF 268
+ + G R A+
Sbjct: 324 EIEIRGRRFPATI 336
>gi|70726380|ref|YP_253294.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
haemolyticus JCSC1435]
gi|123660300|sp|Q4L6N7|GCST_STAHJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|68447104|dbj|BAE04688.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 363
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 109/310 (35%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++
Sbjct: 53 SHMGEISIKGNDASKFVQYLLSNDTNNLTDTKAQYTALCNEEGGIIDDLVTYKIGDNDYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + D + + + +V + + G + + S +D S
Sbjct: 113 LIVNAANTDKDFAWVQKHAPKFDVEVSNVSNQFGQLAVQGPKARDLVSGLVDIDVSEMKP 172
Query: 124 -----------------------------------DVLLHRTWGHNEKIASDIKTYHELR 148
V + + + + + LR
Sbjct: 173 FDFQQNVTLFGKNVILSQSGYTGEDGFEIYCEAKDTVDIWNGFIEHNVVPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEDFIGKSVLKDQKENGSERRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G P+L D EIG + K++A+A I + + + + + +
Sbjct: 286 VGLELLDKGIARTGYPVLDLDGNEIGEVTSGTQAPSSGKSIAMAIIKRDEFEMGRELLVQ 345
Query: 259 VHGVRVKASF 268
V ++KA
Sbjct: 346 VRKRQLKAKI 355
>gi|239827700|ref|YP_002950324.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp.
WCH70]
gi|259647493|sp|C5D4A2|GCST_GEOSW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|239807993|gb|ACS25058.1| glycine cleavage system T protein [Geobacillus sp. WCH70]
Length = 364
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 98/311 (31%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G ++ FLQ ++T DV L + S + G + LI K + ++
Sbjct: 50 SHMGEFVVKGDDSLAFLQKMMTNDVSKLTDGRVQYSLMCYEDGGTVDDLLIYKKADGHYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE--------------HTFSN 112
L ++ + + + L + L +V + L+
Sbjct: 110 LVVNAANIEKDFEWLHGH-LFGDVELVNISQEIAQLALQGPLAEQVLQKLTNTDLSAIKF 168
Query: 113 SSFIDE-------------------------RFSIADVLLHRTWGHNEK---IASDIKTY 144
SF D+ R A L ++ + +
Sbjct: 169 FSFQDDININGVKALVSRTGYTGEDGFEIYCRREDAVALWESILEAGKEEGVLPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IG++V+ + + RK
Sbjct: 229 DTLRFEATLPLYGQEL-SKDITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + + EIG + LA+ + + + + + +
Sbjct: 286 VGIEMIDKGIPRHGYKVFANGEEIGFVTTGTQSPTLKKNIGLALIKTEFTE--MDTEVEV 343
Query: 258 TVHGVRVKASF 268
+ G R+KA
Sbjct: 344 EIRGKRLKAKV 354
>gi|320322885|gb|EFW78976.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329806|gb|EFW85794.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 374
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D NTD P A+ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMNTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|295399150|ref|ZP_06809132.1| glycine cleavage system T protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978616|gb|EFG54212.1| glycine cleavage system T protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 364
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 101/311 (32%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G ++ FLQ ++T DV L A+ + + G + L+ K + ++
Sbjct: 50 SHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADGHYL 109
Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84
L ++ + + ++ K L F+
Sbjct: 110 LVVNAANIEKDFAWLNEHLIGDVELADVSQETAQLALQGPLAEQVLQKLTNIDLSELKFF 169
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ NV ++ + E F ++ ++ + +L + +
Sbjct: 170 AFQDNVYLQEVKALISRTGYTGEDGFEIYCRAEDAVALWEAILA-AGKEEGVLPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IG++V+ + + RK
Sbjct: 229 DTLRFEAALPLYGQELAKD-ITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + + EIG + LA+ + + D I + +
Sbjct: 286 VGIEMMDKGIPRHGYKVFANGEEIGFITTGTQSPTLKKNIGLALIKSEFTD--INAEVEV 343
Query: 258 TVHGVRVKASF 268
+ G +KA
Sbjct: 344 EIRGKHLKAKV 354
>gi|255726752|ref|XP_002548302.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404]
gi|240134226|gb|EER33781.1| hypothetical protein CTRG_02599 [Candida tropicalis MYA-3404]
Length = 468
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R +G+ + +++ P + +D +NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 270 RRRFENGVFETQDAPKGTSLLPFECNLDYVNGLSLDKGCYVGQELTIRSFNNGVIRKRIF 329
Query: 206 IITGTD 211
+ +
Sbjct: 330 PVQFFE 335
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 58/146 (39%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-----------------------------DVLTL---- 34
+++ I + G A FL +IT+ DV
Sbjct: 12 SKTLITIRGPDATKFLNGLITSRLLPNIVKKKQHTISESEENRNVNLSEIIDVSKNYGLI 71
Query: 35 ------PYK------IARGSAILTPQGKILLYFLISK-------------IEEDTFILEI 69
P S IL +G+++ + +E+ F+LE+
Sbjct: 72 HEDIYDPDGTITISRDGINSMILNSKGRVVTDCFLYPEPFHNLDGMFDKEMEQPGFVLEV 131
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQ 95
D S L+ L +KL + V I
Sbjct: 132 DSSISSQLMMLLKLHKLSAKVDISPD 157
>gi|56420960|ref|YP_148278.1| glycine cleavage system aminomethyltransferase T [Geobacillus
kaustophilus HTA426]
gi|61213222|sp|Q5KX76|GCST_GEOKA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56380802|dbj|BAD76710.1| glycine cleavage system T protein, aminomethyltransferase
[Geobacillus kaustophilus HTA426]
Length = 364
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++
Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86
L ++ + + ++ +L + L
Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169
Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
++ +E+ + +V + E F ++ ++ + +L + + +
Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDSVLPCGLGA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR + + +I P +A + + K +IGQ V+ R + R+
Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKETPFIGQAVLKRQKEEGPPRR 284
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
I +P G + D E+G + LA+ + D AI + +
Sbjct: 285 LVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342
Query: 257 LTVHGVRVKASF 268
+ + G R+KA+
Sbjct: 343 VDIRGKRLKANI 354
>gi|168183383|ref|ZP_02618047.1| aminomethyltransferase [Clostridium botulinum Bf]
gi|237794017|ref|YP_002861569.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum Ba4 str. 657]
gi|259647489|sp|C3L1M5|GCST_CLOB6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|182673558|gb|EDT85519.1| aminomethyltransferase [Clostridium botulinum Bf]
gi|229261446|gb|ACQ52479.1| glycine cleavage system T protein [Clostridium botulinum Ba4 str.
657]
Length = 370
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 100/306 (32%), Gaps = 48/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A F+Q ++T D+ L + + G ++ L+ K ED F
Sbjct: 52 SHMGEATVKGKDAQKFVQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFF 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L I+ S +D + +L +K +V I ++ + +D
Sbjct: 112 LVINASNKDKDVKWILDHKGDFDVEIVDVSDSIAQLAFQGPLAEEILQKIVDVDLQEIKF 171
Query: 123 -----------ADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFL--- 161
L+ RT E K +H + +N G +
Sbjct: 172 FKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAI-LNAGKEEGAQPIGLGA 230
Query: 162 -----------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
TI P + M + + + +IG++ + + + + RK
Sbjct: 231 RDTLRFEASLLLYGNEMDETITPLEVGMGFFVKLKVEED-FIGKDALIKQKAEGVTRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+P G ++ D IG + KA+ +A +++ I + V
Sbjct: 290 GFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVR 349
Query: 261 GVRVKA 266
+KA
Sbjct: 350 KKELKA 355
>gi|150021749|ref|YP_001307103.1| glycine cleavage system aminomethyltransferase T [Thermosipho
melanesiensis BI429]
gi|166221576|sp|A6LP67|GCST_THEM4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149794270|gb|ABR31718.1| glycine cleavage system T protein [Thermosipho melanesiensis BI429]
Length = 363
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 93/282 (32%), Gaps = 46/282 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK + F+ +IT D L +A+ G + L KI E+ +
Sbjct: 49 SHMGEVIVEGKDSTKFVDFLITNDFKNLKPGEIVYTAMCNENGGFVDDLLAYKISEEKAM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108
L I+ S + + +V +E + V+++ +
Sbjct: 109 LVINASNIEKDFSWMKKISESFDVTLENKSDEYVLIAVQGPNAQKTLQKITNVDLEQIGY 168
Query: 109 -TFSNSSFID-----ERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELR 148
TF+ + +D R + + + + I + + LR
Sbjct: 169 YTFTEGNVLDIKAIISRTGYTGEDGFEIYTTDKDGIIKIWKKLLNLNVIPAGLGARDCLR 228
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ ++ D TI P + + + K ++G+E + R R+
Sbjct: 229 LEASLLLYGNDM-DETITPLEVGIKW--AVKFEKD-FMGKEALKRQLEEGTSRRLKGFKI 284
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246
+ G + D EIG + +A+ +A I+K
Sbjct: 285 IDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEK 326
>gi|238880768|gb|EEQ44406.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 469
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333
Query: 206 IITG 209
+
Sbjct: 334 PVQF 337
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29
++S IK+ G A FL ++T+
Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSKNYGLMH 71
Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70
D+ Y S IL +G+++ + + E ++LE+D
Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDGVFQESMNEPGYLLEVD 131
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
S L+ L +KL + V I ++ TF
Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171
>gi|68471677|ref|XP_720145.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
gi|46442000|gb|EAL01293.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
Length = 469
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333
Query: 206 IITG 209
+
Sbjct: 334 PVQF 337
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29
++S IK+ G A FL ++T+
Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNLSEIIDVSKNYGLMH 71
Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70
D+ Y S IL +G+++ + + E ++LE+D
Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDWVFQESMNEPGYLLEVD 131
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
S L+ L +KL + V I ++ TF
Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171
>gi|68471940|ref|XP_720013.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
gi|74591236|sp|Q5AEF0|CAF17_CANAL RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|46441863|gb|EAL01157.1| potential CCR4 associated factor Caf17p [Candida albicans SC5314]
Length = 469
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+ R +G+ + S++ P + +D NG+SL KGCY+GQE+ R + +IRKR
Sbjct: 274 QRRFQNGLFEIQDASKGSSLLPFECNLDYTNGLSLDKGCYVGQELTIRTFNNGVIRKRIF 333
Query: 206 IITG 209
+
Sbjct: 334 PVQF 337
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 57/160 (35%)
Query: 8 NQSFIKVCGKSAIPFLQAIITA-------------------------------------- 29
++S IK+ G A FL ++T+
Sbjct: 12 SKSIIKIRGPDATKFLNGLVTSRLLPNVVKKKQHTISESENRHSNFSEIIDVSKNYGLMH 71
Query: 30 -DVLTLPYK-----IARGSAILTPQGKILLYFLISK-------------IEEDTFILEID 70
D+ Y S IL +G+++ + + E ++LE+D
Sbjct: 72 EDIYDPDYNINISRDGINSMILNSKGRVVTDCFLYPDPFHNVDGVLQESMNEPGYLLEVD 131
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
S L+ L +KL + V I ++ TF
Sbjct: 132 TSISQQLMMILKLHKLSAKVDIVPDKKLYSYYYYDDTATF 171
>gi|330938936|gb|EGH42435.1| glycine cleavage system T protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 374
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIETLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISRVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240
++ G+ I+ + IGT+ +LA
Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329
>gi|167032006|ref|YP_001667237.1| glycine cleavage system T protein [Pseudomonas putida GB-1]
gi|166858494|gb|ABY96901.1| glycine cleavage system T protein [Pseudomonas putida GB-1]
Length = 373
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 105/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L++++ D++ LP + R + QG IL +++ + +DT
Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK--------LRSN-VIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + +D + L + L ++ +Q V + + +F+
Sbjct: 114 LVVNAACKDQDLAHLQTHIGGRCEVQPLFEQRALLALQGPAAVKVLERLAPEVAGMTFMQ 173
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R A+ L R E + LR+
Sbjct: 174 FRPVKLLGEDCFVSRSGYTGEDGYEISVPVQGAEALARRLLAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206
G+ D T +L+ ++ + +G + G E + Q + RKR +
Sbjct: 234 AGLCLYGHDMNTETTPIEASLLWAISKVRRAEGARAAGFPGAEAIFAHQREGVARKRVGL 293
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ +D +G + G +A+ I+ A+ + V
Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLGAPVAMGYIESEHAALDTPLFAVV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKKVALKV 360
>gi|294102561|ref|YP_003554419.1| glycine cleavage system T protein [Aminobacterium colombiense DSM
12261]
gi|293617541|gb|ADE57695.1| glycine cleavage system T protein [Aminobacterium colombiense DSM
12261]
Length = 363
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 88/268 (32%), Gaps = 47/268 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A +LQ ++T D+ + + + P G ++ L+ K+ + +
Sbjct: 50 SHMGEVRVAGPKAEAWLQNMMTNDITAMENGQVIYTFMCYPNGGVVDDLLVYKVSTENYF 109
Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84
L I+ S K + ++ K L F+
Sbjct: 110 LVINASNTDKDVLWFHDHVTEGVTVENLSPQYSELALQGPKAEEILKKIANFDPASLGFF 169
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ NV + + E F DE + D ++ + + + +
Sbjct: 170 RFVENVKVAGVDALVSRTGYTGEDGFEIYMPWDEGAPVWDAVM-KAGEEFGILPAGLGCR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G+ + + I P +A + ++ +IG+ ++ ++ + RK
Sbjct: 229 DSLRFEAGLPLYGHELA-AYITPLEAGLGFFVKLNTE---FIGRHALAALKENGVPRKIV 284
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ +P + +G +
Sbjct: 285 GLEMIDKGIPREQYEVRAQGRTVGRVTT 312
>gi|71736569|ref|YP_273428.1| glycine cleavage system T protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557122|gb|AAZ36333.1| glycine cleavage system T protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 374
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +TD P A+ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|218234823|ref|YP_002369032.1| glycine cleavage system aminomethyltransferase T [Bacillus cereus
B4264]
gi|226711367|sp|B7HBA0|GCST_BACC4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218162780|gb|ACK62772.1| aminomethyltransferase [Bacillus cereus B4264]
Length = 366
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 105/308 (34%), Gaps = 49/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------ 120
L I+ S + + L + + ++ + + + + E
Sbjct: 112 LVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFF 171
Query: 121 -SIADVLL---------------------------HRTWGHNEKIASD-------IKTYH 145
D+L+ + W ++ ++ +
Sbjct: 172 KFKKDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR + + I P +A + + K + G+ + + RK
Sbjct: 232 TLRFEATLPLYGQEL-SKDITPIEAGIGF--AVKTNKEADFFGKATLKEQKENGAPRKLV 288
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
I +P + P+ + +IG + KK++ +A ID A+ + + +
Sbjct: 289 GIEVIERGIPRTHYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIR 348
Query: 261 GVRVKASF 268
RVKA
Sbjct: 349 NKRVKAVV 356
>gi|257487382|ref|ZP_05641423.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|330989710|gb|EGH87813.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009021|gb|EGH89077.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 374
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVKLLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +TD P A+ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPEERTPVREGTEIVDEQGTVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|88799063|ref|ZP_01114644.1| aminomethyltransferase [Reinekea sp. MED297]
gi|88778290|gb|EAR09484.1| aminomethyltransferase [Reinekea sp. MED297]
Length = 363
Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 99/283 (34%), Gaps = 45/283 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A FLQ ++ DV L A +A+L PQG ++ ++ +++E +
Sbjct: 50 SHMTIVDILGDDAQAFLQKLLANDVAKLKTPGKALYTAMLNPQGGVIDDLIVYRLDE-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
++ + R+ ++ + V I+ + +V + + + E
Sbjct: 109 RTVVNCATREKDLEWIQQQATDMAVTIKERDDLAMVAIQGPQSVEKATVALGEEHGPIAN 168
Query: 121 --------SIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149
D + RT N + LR+
Sbjct: 169 QVKPFQGLPSGDWFIARTGYTGEDGLEVMVPNNEVTDFWSRLLDNGVQPCGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D P ++ M + ++G++ +++++ + RK ++
Sbjct: 229 EAGMNLYGNDM-DEQTHPLESGMAWTVAWEPEERDFMGRDALTKLREQGGYRKLIGLVLE 287
Query: 210 TDDLPPSGSPILT--DDIEIGTLGVVVG----KKALAIARIDK 246
+ + + D IG + +++A+ARID+
Sbjct: 288 QRGVMRAHQTLHASEDGPAIGEITSGTFSPTLNQSIAMARIDR 330
>gi|314936342|ref|ZP_07843689.1| glycine cleavage system T protein [Staphylococcus hominis subsp.
hominis C80]
gi|313654961|gb|EFS18706.1| glycine cleavage system T protein [Staphylococcus hominis subsp.
hominis C80]
Length = 363
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 57/311 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G++A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++
Sbjct: 53 SHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYL 112
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123
L ++ + D + + + K + V + G + + S +D S
Sbjct: 113 LIVNAANTDKDFEWIQKHQSKFNAAVT-NVSEQYGQLAIQGPQARTLVSELVDVDVSEMK 171
Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147
V + + + + L
Sbjct: 172 PFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGVVPCGLGARDTL 231
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRK 202
R+ G+ D +I P++ GI + +IG+ V+ + R+
Sbjct: 232 RLEAGLPLHGQDLT-ESITPYE------GGIGFAAKPLIEDEFIGKSVLKNQKENGSKRR 284
Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
+ + +G ++ D EIG + K++A+A ID+ + + K + +
Sbjct: 285 TVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLV 344
Query: 258 TVHGVRVKASF 268
V ++KA
Sbjct: 345 QVRKRQLKAKI 355
>gi|258648548|ref|ZP_05736017.1| glycine cleavage system T protein [Prevotella tannerae ATCC 51259]
gi|260851321|gb|EEX71190.1| glycine cleavage system T protein [Prevotella tannerae ATCC 51259]
Length = 361
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 50/299 (16%), Positives = 108/299 (36%), Gaps = 50/299 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G+ A ++Q I T D+ + +L P G + L+ K E F+
Sbjct: 50 SHMGEVSVTGEEAERYVQHIFTNDIKSATIGSVFYGMMLYPNGGTVDDLLVYKNGEQDFL 109
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN--------VII---EIQPINGVVLSWN-QEHTF 110
L I+ + D + ++ + + + + I E + I G VL ++ F
Sbjct: 110 LVINAANIDKDYAWIEEQAKGFNVTTKNLSESYGQLAIQGPEAEEIVGSVLGLECKDLAF 169
Query: 111 SNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
+D R +G+++ I I+ + +
Sbjct: 170 YTFKTLDNNEVPAILSRTGYTGEDGFELYGNHDFI---IECWDKLIAAGVQPCGLGCRDT 226
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR G+ + P P + + + + L K +IG+E ++ + + +K I
Sbjct: 227 LRFEVGLPLYGDELSPEIS-PVMSGLSMF--VKLDKEEFIGKEACAKQKAEGVEKKVVGI 283
Query: 207 ITGTDDLPPSGSPILTDDIEIGTL----GVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
+ +P G + D +G + + K++ +A +D + + + +H
Sbjct: 284 ELASRAIPRHGYEVEKDGKVVGEITTGYRSISTGKSICMALVDISAAKLGTELQVKIHN 342
>gi|325278202|ref|ZP_08143697.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
gi|324096663|gb|EGB95014.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
Length = 373
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G +A L++++ D++ LP + R + QG IL +++ + +D
Sbjct: 54 SHMGQIILHGANAAKALESLVPVDIIDLPVGMQRYAMFTDAQGGILDDLMVANLGDDKLF 113
Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + + + L ++ R+ ++ +Q + +N +F
Sbjct: 114 LVVNAACKAQDLAHLQAQIGNACDVQPLFEARA--LLALQGPAAAHVLARLAPEVANMTF 171
Query: 116 IDER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ R A+ L R E + LR
Sbjct: 172 MQLREVKLLGEDCFVSRSGYTGEDGYEISVPAGAAEALARRLLAEPEVQPIGLGARDSLR 231
Query: 149 INHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ G+ D N++ P A+ + G + G E + Q + RKR
Sbjct: 232 LEAGLCLYGHDMNSETTPVEASLLWAISKVRRADGQRAGGFPGAEAIFTQQRDGVARKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259
++ G+ I+ +D +G + L A+ ID AI + V
Sbjct: 292 GLLPQERTPVREGADIVDANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHAAIDTALFAVV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKKVALKV 360
>gi|312110247|ref|YP_003988563.1| glycine cleavage system protein T [Geobacillus sp. Y4.1MC1]
gi|311215348|gb|ADP73952.1| glycine cleavage system T protein [Geobacillus sp. Y4.1MC1]
Length = 364
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G ++ FLQ ++T DV L A+ + + G + L+ K + ++
Sbjct: 50 SHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADGHYL 109
Query: 67 LEIDRS----------------------------------KRDSLIDK--------LLFY 84
L ++ + + ++ K L F+
Sbjct: 110 LVVNAANIEKDFAWLNEHLIGDVELADVSRETAQLALQGPLAEQVLQKLTNIDLSALKFF 169
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+ NV ++ + E F ++ ++ + +L + +
Sbjct: 170 AFQDNVYLQEVKALISRTGYTGEDGFEIYCRAEDAVALWEAILA-AGKEEGVLPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR + + I P +A + + K +IG++V+ + + RK
Sbjct: 229 DTLRFEAALPLYGQELAKD-ITPIEAGLGF--AVKTNKDADFIGKDVLKKQKEEGTARKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + + EIG + LA+ + + + I + +
Sbjct: 286 VGIEMMDKGIPRHGYKVFANGEEIGFITTGTQSPTLKKNIGLALIKSEFTE--INAEVEV 343
Query: 258 TVHGVRVKASF 268
+ G +KA
Sbjct: 344 EIRGKHLKAKV 354
>gi|307303428|ref|ZP_07583182.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
gi|306902819|gb|EFN33411.1| folate-binding protein YgfZ [Sinorhizobium meliloti BL225C]
Length = 825
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 51/282 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + V G+ A L I ADV + + + +L +G + ++ D F+
Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546
Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99
+ ++ D + Y + + + G
Sbjct: 547 IVTGSAQAVHDADWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARNILGRITSADLSNAG 606
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145
+ +E ++ R + L +E + H
Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666
Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201
LRI G + + P I PH+A + +S K G +IG+E + R +H
Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKHAGAPV 723
Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241
+R + T D P G IL D +G + L +
Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765
>gi|300710718|ref|YP_003736532.1| glycine cleavage system aminomethyltransferase T [Halalkalicoccus
jeotgali B3]
gi|299124401|gb|ADJ14740.1| glycine cleavage system aminomethyltransferase T [Halalkalicoccus
jeotgali B3]
Length = 360
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 89/312 (28%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A LQ + T DV +L A+ S I +G IL +I ++ E+ F+
Sbjct: 51 SHMGEIEVSGPDAATLLQGLTTNDVESLSVGRAQYSTITNEEGVILDDTVIYRLAEEEFL 110
Query: 67 -----------------------LEIDRSK--------------RDSLIDKLLFYKLR-- 87
L+ +L+ K LR
Sbjct: 111 FIPNAGHDGEMEERWVEHRAEWDLDCAVENRTDEWAMFAIQGPDAAALVSKAAGEGLRDL 170
Query: 88 SNVIIEIQPING--VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
S I + G + + + V W + +
Sbjct: 171 SRFSITRAEVAGTECLFARTGYTGEDGYEALVPWDGAEGV-----WEEFDCQPCGLGARD 225
Query: 146 ELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G + DF P++A + + ++G++ ++R+
Sbjct: 226 TLRIEAGFLLSGQDFHSEENPRNPYEARVGFTVDLDTE---FVGRDALARVDENGPEELF 282
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
I +P I D +G + L D + + + +
Sbjct: 283 VGIRLEERGIPRQCYEIRADGEPVGEVTSGTMSPTLGEPIGLGYVPTDYAEEGTEVAVRI 342
Query: 258 TVHGVRVKASFP 269
R + P
Sbjct: 343 RGTDKRARIEAP 354
>gi|16264722|ref|NP_437514.1| putative dehydrogenase protein [Sinorhizobium meliloti 1021]
gi|15140860|emb|CAC49374.1| dimethylglycine dehydrogenase [Sinorhizobium meliloti 1021]
Length = 825
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 51/282 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + V G+ A L I ADV + + + +L +G + ++ D F+
Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546
Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99
+ ++ D + Y + + + G
Sbjct: 547 IVTGSAQAVHDADWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARDILGRITSADLSNAG 606
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145
+ +E ++ R + L +E + H
Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666
Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201
LRI G + + P I PH+A + +S K G +IG+E + R +H
Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKHAGAPV 723
Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241
+R + T D P G IL D +G + L +
Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765
>gi|302188383|ref|ZP_07265056.1| glycine cleavage system T protein [Pseudomonas syringae pv.
syringae 642]
Length = 374
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 92/276 (33%), Gaps = 43/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFAGVTLLGIKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + RKR
Sbjct: 234 EAGLCLYGHDMDTHTSPIEASLLWAISKVRRADGERAGGFPGAERIFAQQQNGVSRKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240
++ G+ I+ + IGT+ +LA
Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329
>gi|86605832|ref|YP_474595.1| aminomethyltransferase [Synechococcus sp. JA-3-3Ab]
gi|86554374|gb|ABC99332.1| putative aminomethyltransferase [Synechococcus sp. JA-3-3Ab]
Length = 322
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 90/299 (30%), Gaps = 50/299 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S +++ G + +L T ++ L + +TP IL + E+
Sbjct: 17 SGWGRLRMKGSPGLDYLHNRSTQNLKALKPGQGADTVFVTPTAGIL-DLATVYVGEEDCW 75
Query: 67 LEIDRSKRDSLIDKLLFY---------------------------KLRSNVIIE------ 93
+ +R L+ L L V+
Sbjct: 76 IWTSPQRRSLLMQSLGRMLPLVRGAQLQDETDQTFGFGLLGSQSQALLEKVVGSERIPTG 135
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKTYHELR 148
V + H + F++ + + + + + LR
Sbjct: 136 PHEHCAVEIQGIPVHLACGTGLAQPGFTLWGTIDQKVALEECLLQAGAKLAPPELWEVLR 195
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G + + S P +A + +SL KGCY+GQEV+++ IR+ I
Sbjct: 196 LEAGRPAADRELT-SDYNPLEAGL--WRAVSLDKGCYVGQEVLAKQVTYRRIRQTLWGIR 252
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ P G+ IL +IG L L R +G+ + V V
Sbjct: 253 LQGEARP-GTEILRQGEKIGLLTSAGQTSQEYLGLGYVRT---KFEPAEGLQVEVGSVP 307
>gi|159902844|ref|YP_001550188.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT
9211]
gi|159888020|gb|ABX08234.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus
str. MIT 9211]
Length = 280
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 101/252 (40%), Gaps = 24/252 (9%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARG--SAILTPQGKI--LLYFLISKIEEDTFILE 68
++ G+ + FLQ TA+++ P + + L+P G++ LL + + +L
Sbjct: 17 RLNGRGSRKFLQGQTTAEIIH-PEGNHKYLRTCWLSPTGRLKALLEVRFIDQDAEVVVLG 75
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ K + D+++F S+ +EIQ I + + + E ++
Sbjct: 76 GNSQKLLNGFDQVIF---PSD-QVEIQSIGFIQRVQELSYKKTWGECYVEWLLPSESTSS 131
Query: 129 RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ 188
G + I+ + RI G+ + P + + N I+L KGCY+GQ
Sbjct: 132 VFDGFQPANKNQIEEW---RIRQGLPIGLGEL-NEKTNPFELGL--SNLINLNKGCYLGQ 185
Query: 189 EVVSRIQHRNIIRKRPMIITGTDDLPP----SGSPILTDDIEIGTLGVVVG-----KKAL 239
E ++++++ ++++++ ++ G+ + + G + + L
Sbjct: 186 ETMAKLKNNSLLKQQLRFWEINKEMTSDDTLVGNYLEIGGDKAGYITSSMQIEDGKTIGL 245
Query: 240 AIARIDKVDHAI 251
A+ R + +
Sbjct: 246 ALIRRKYISEKL 257
>gi|330873091|gb|EGH07240.1| glycine cleavage system T protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 374
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 98/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGHCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353
Query: 259 VHGVRVKASF 268
V + +
Sbjct: 354 GKKVPMLVTK 363
>gi|149245367|ref|XP_001527181.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514322|sp|A5DXC3|CAF17_LODEL RecName: Full=Putative transferase CAF17, mitochondrial; Flags:
Precursor
gi|146449575|gb|EDK43831.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 513
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 146 ELRINHGIVDPNTDFLPST-IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ R ++G+ + + + P + +D +NG+SL KGCY+GQE+ R + IIRKR
Sbjct: 292 DRRFSNGLFETGDVAADESSLLPFECNLDYINGLSLDKGCYVGQELTIRTYNNGIIRKRI 351
Query: 205 MIITG 209
+
Sbjct: 352 YPVQF 356
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 73/181 (40%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIIT---------------------------ADVLTLPYK 37
+L ++S I++ G A+ FL ++T DV+ +
Sbjct: 10 HLVSKSLIQIRGPDALRFLNGLLTTRLLPTITKKKQHTISSSDNSAIHATLQDVVDVSTN 69
Query: 38 IARG-------------------SAILTPQGKILLYFLISKIE----------------- 61
S IL +G+++ + +
Sbjct: 70 YGLMHEDIYDPEHNILIGRDGLNSMILNSKGRVVTDLYLYAMPFSTYLPESETCTDNDSL 129
Query: 62 ----------EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+ F++E+D S+ S+I L YKL S V I + +N F
Sbjct: 130 WGKTLESEMSQPNFLMEVDSSRVKSVILMLKMYKLASKVKILPRDDLKSYYYYNDSAEFD 189
Query: 112 N 112
+
Sbjct: 190 D 190
>gi|222151428|ref|YP_002560584.1| glycine cleavage system T protein [Macrococcus caseolyticus
JCSC5402]
gi|222120553|dbj|BAH17888.1| glycine cleavage system T protein [Macrococcus caseolyticus
JCSC5402]
Length = 372
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 49/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A+ +LQ ++T D + K A+ + I G ++ ++ K+EE+ ++
Sbjct: 64 SHMGEIIVEGEHALEYLQYVLTNDASKMTDKKAQYTMICNEDGGVVDDLVVYKLEENKYL 123
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ D + L +K + V I + G + + + + E S +
Sbjct: 124 LVVNAGNTDIDFEWLKSHK-KDGVTITNVSSEYGQIAVQGPKTLEKLAPEVKENISEMKL 182
Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148
+ + + LR
Sbjct: 183 FEFLKDVEIFGKNVILSQSGYTGEYGFEIYCKAEDTLSIWEALLNLGITPCGLGARDTLR 242
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ + D I P++A M + L KG +IG+ V+ + + + RK I
Sbjct: 243 LEAALPLHGQDLSTE-ITPYEAKMGFS--VKLDKGNFIGKSVLETQKLKGVNRKSAGIEL 299
Query: 209 GTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+ + + +D +IG + ALA+ D + + +
Sbjct: 300 LERGIARTDYEVFDKEDNKIGYITSGTQSPLTGRSIALALINTDFTAIDTEVYVQVRKKR 359
Query: 262 VRVKASF 268
+ K
Sbjct: 360 IPAKVVK 366
>gi|228476087|ref|ZP_04060795.1| glycine cleavage system T protein [Staphylococcus hominis SK119]
gi|228269910|gb|EEK11390.1| glycine cleavage system T protein [Staphylococcus hominis SK119]
Length = 363
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 57/311 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G++A F+Q +++ D L A+ +A+ +G I+ + KI ++ ++
Sbjct: 53 SHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYL 112
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA- 123
L ++ + D + + + K + V + G + + S +D S
Sbjct: 113 LIVNAANTDKDFEWIQKHQSKFNAAVT-NVSEQYGQLAIQGPQARTLVSELVDVDVSEMK 171
Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147
V + + + + L
Sbjct: 172 PFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGIVPCGLGARDTL 231
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRK 202
R+ G+ D +I P++ GI + +IG+ V+ + R+
Sbjct: 232 RLEAGLPLHGQDLT-ESITPYE------GGIGFAAKPLIEDEFIGKSVLKDQKENGSKRR 284
Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
+ + +G ++ D EIG + K++A+A ID+ + + K + +
Sbjct: 285 TVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLV 344
Query: 258 TVHGVRVKASF 268
V ++KA
Sbjct: 345 QVRKRQLKAKI 355
>gi|297529406|ref|YP_003670681.1| glycine cleavage system protein T [Geobacillus sp. C56-T3]
gi|297252658|gb|ADI26104.1| glycine cleavage system T protein [Geobacillus sp. C56-T3]
Length = 364
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++
Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86
L ++ + + ++ +L + L
Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169
Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
++ +E+ + +V + E F ++ ++ + +L + + +
Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDGVLPCGLGA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRK 202
LR + + +I P +A + + K +IGQ V+ R + R+
Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKEPPFIGQAVLKRQKEEGPPRR 284
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
I +P G + D E+G + LA+ + D AI + +
Sbjct: 285 LVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342
Query: 257 LTVHGVRVKASF 268
+ + G R+KA+
Sbjct: 343 VDIRGKRLKANI 354
>gi|217979703|ref|YP_002363850.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella
silvestris BL2]
gi|217505079|gb|ACK52488.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella
silvestris BL2]
Length = 761
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 105/311 (33%), Gaps = 62/311 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS ++ G A LQ+ +T ++ L +AI G +L + ++ +
Sbjct: 432 LIDLSALRKFEITGPDAEILLQSAVTRNIRKLAVGQIVYTAICHEHGGMLDDGTVFRLGD 491
Query: 63 DTFILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNS 113
+ F L + +L LR+ V ++ V L + T +
Sbjct: 492 NNFRLVCGEDYCGVFLRELAARQGLRAFVRSSTDQLHNVALQGPKSRDILREILVTPPHR 551
Query: 114 SFIDE-------------------RFSIADVLLHRTWGHNEKIASDIKTYHEL------- 147
+ DE R L + W H S + + L
Sbjct: 552 ASADELKWFRFTVGKIAGLPVLVSRTGYTGELGYEIWLH---PGSAVAVWDALMAAGKPY 608
Query: 148 -------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSR 193
RI G++ + +F T P +A + + K Y+G E ++R
Sbjct: 609 GIAPFGFAALDMVRIEAGLIFAHHEFCDETD-PFEAGIGF--AVPAEKADPYVGSEALAR 665
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDH 249
+ I R + + G + + G P+ ++G + V + +A+AR+D
Sbjct: 666 RRASPIRRLAGLDVAGNEAVAH-GDPVFAGRAQVGVVTSAMRSPVLGRTIALARLDAACA 724
Query: 250 AIKKGMALTVH 260
+I G L +
Sbjct: 725 SI--GTDLEIG 733
>gi|325859648|ref|ZP_08172781.1| aminomethyltransferase [Prevotella denticola CRIS 18C-A]
gi|325482928|gb|EGC85928.1| aminomethyltransferase [Prevotella denticola CRIS 18C-A]
Length = 361
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 88/267 (32%), Gaps = 48/267 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ I T DV LP + P G ++ I K++E ++
Sbjct: 51 SHMGEVIVSGPDADRYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDERLYL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTF--------------- 110
+ I+ + D + + +VIIE G + E
Sbjct: 111 MTINAANIDKDMAWIRQNAEGFDVIIENKSDAYGQLAVQGPEAEEKMENVLGLACKDLKF 170
Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
I R +G I IK + +
Sbjct: 171 YEVKRLEKDGEEVIVSRTGYTGEDGFEVYGTPGYI---IKAWDKLMEAGVKPCGLGCRDT 227
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205
LR G+ + I P A + + + K +IG+E + R + I ++ R +
Sbjct: 228 LRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGISQRLRGI 284
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232
+ G + +P G +L D E+G +
Sbjct: 285 ELEG-NAIPRHGYKVLKDGKEVGEVTT 310
>gi|312962741|ref|ZP_07777230.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
gi|311283116|gb|EFQ61708.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
Length = 374
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +A L+ ++ D++ LP + R + QG IL +++ + D
Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
L ++ + +D + L + + ++ +Q V + S +F
Sbjct: 115 LVVNAACKDQDLAHLRAHIGDQCTVEPLFEARALLALQGPAAVKVLARLAPEVSKMTFMQ 174
Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I + A+ L E A + LR+
Sbjct: 175 FAALRLLGVDCYVSRSGYTGEDGFEISVPAASAESLARSLLAETEVEAIGLGARDSLRLE 234
Query: 151 HGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
G+ D N + P A+ + G + G + + Q + RKR +
Sbjct: 235 AGLCLYGHDMNAETTPIEASLLWAISKARRADGVRAGGFPGADRIFTQQQTGVSRKRVGL 294
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ + IG++ G LA+ +D A+ ++ V
Sbjct: 295 LPQERTPVREGAEIVDAEGTVIGSVCS--GGFGPSLGGPLAMGYLDSAFTALDTEVSALV 352
Query: 260 HGVRVKASF 268
G RV
Sbjct: 353 RGKRVPLRV 361
>gi|225181892|ref|ZP_03735327.1| glycine cleavage system T protein [Dethiobacter alkaliphilus AHT 1]
gi|225167406|gb|EEG76222.1| glycine cleavage system T protein [Dethiobacter alkaliphilus AHT 1]
Length = 368
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/323 (17%), Positives = 106/323 (32%), Gaps = 65/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK+A FLQ ++T DV L S + P G + L+ + ++ ++
Sbjct: 52 SHMGEIMVEGKNAEEFLQRVLTNDVSKLKDNKIIYSPVCYPHGGTVDDILVYRYNKEKYL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKLLF--------Y 84
L ++ ++ ++ Y
Sbjct: 112 LVVNAGNTSKDFEWFQDNLTEGVSLKNISPEIAQLALQGPNSQKILQEITKTQLDNIMYY 171
Query: 85 KLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-- 140
S E+ IN ++ + E F +++ A L + +EK D
Sbjct: 172 GFVSK--SEVAGINCIISRTGYTGEDGFELYCPVED----ATYLWRALFDASEKTQGDLV 225
Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQH 196
+ LR + + I P +A ++ +S K +IG+E + + +
Sbjct: 226 PVGLGARDVLRFEAALPLYGHEL-SKDITPLEAGLNRF--VSFDKEVGFIGKEALLKQKE 282
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
I RK + +P G I + EIG + +A +DK
Sbjct: 283 EGIKRKVMGLEMLERGIPREGYKIKKGEEEIGWVSSGSLSPTLDKYLGMAFLDVDKAKVG 342
Query: 251 IKKGMALTVHGVRVKASFPHWYK 273
+ +A+ R + +Y+
Sbjct: 343 DEVLVAIRKREYRARVVKLPFYR 365
>gi|75908972|ref|YP_323268.1| glycine cleavage system aminomethyltransferase T [Anabaena
variabilis ATCC 29413]
gi|75702697|gb|ABA22373.1| aminomethyltransferase [Anabaena variabilis ATCC 29413]
Length = 376
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 105/296 (35%), Gaps = 52/296 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ + GK+ I LQ ++ +D+ L A+ + +L PQG I+ ++ ED
Sbjct: 59 SHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDDIIVYYQGEDNSG 118
Query: 64 --TFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGV----------- 100
+ ++ + ++ L +++ + V+I +Q +
Sbjct: 119 MQQAFIIVNAATTSKDKAWILSHLDQNQVQFQDISLAKVLIAVQGPKAIDYLQPFVQQNL 178
Query: 101 ----------VLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTY 144
Q + + + E V L R+ + I +
Sbjct: 179 QPIKAFGHLGATVLGQAGFIARTGYTGEDGFEILLDPEVGVELWRSLSNAGVIPCGLGAR 238
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + D +T P +A + L + TKG +IG+ V+ + + + R+
Sbjct: 239 DTLRLEAAMALYGQDINDNTT-PLEAGLGWLVHLD-TKGDFIGRSVLEQQKATGVKRRLI 296
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252
+ ++ G +L+D +G + ALA ++ KV ++
Sbjct: 297 GLQAQGRNIARHGYQVLSDGKVVGEVTSGTLSPTLGHPVALAYVPSKLAKVGQPLE 352
>gi|187734953|ref|YP_001877065.1| glycine cleavage system T protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425005|gb|ACD04284.1| glycine cleavage system T protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 361
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 43/266 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G SA +L +++T D+ L + S +L + ++ ++ ++E +TF
Sbjct: 54 SHMGQFTVAGGSAAAWLNSMLTNDINKLNVGQGQYSVMLNDRAGVIDDLILYRMEPETFF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--- 123
+ ++ SK D L ++ + V +E V L+ S + +
Sbjct: 114 VVVNASKIDEDFAWLSAHQ-PAGVTLENHSDEYVGLAVQGPECGEVFSRVIPGVELPPRN 172
Query: 124 ----------DVLLHRTWGHNE-----------------------KIASDIKTYHELRIN 150
D+++ RT E + LR+
Sbjct: 173 GISRITAEGTDLIICRTGYTGEDGFEFFCPAKEGVKWFEAFLGAGAKPCGLGARDSLRLE 232
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+D P P +A + + +IG +++ + + R+ I
Sbjct: 233 MCYPLNGSDLSPDKT-PLEAGLGFFCALDTD---FIGSDILREQKANGLSRRLAAIEYTG 288
Query: 211 DDLPPSG--SPILTDDIEIGTLGVVV 234
PP + + IG L V
Sbjct: 289 KGAPPRAHYAVHVPGGEAIGELTSGV 314
>gi|261417713|ref|YP_003251395.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp.
Y412MC61]
gi|319767478|ref|YP_004132979.1| glycine cleavage system protein T [Geobacillus sp. Y412MC52]
gi|261374170|gb|ACX76913.1| glycine cleavage system T protein [Geobacillus sp. Y412MC61]
gi|317112344|gb|ADU94836.1| glycine cleavage system T protein [Geobacillus sp. Y412MC52]
Length = 364
Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 111/312 (35%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ ++ FLQ ++T DV L A+ + + G + LI + E+ ++
Sbjct: 50 SHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYL 109
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKL------ 86
L ++ + + ++ +L + L
Sbjct: 110 LVVNAANTEKDFAWLSGHVEGDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPF 169
Query: 87 -RSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
++ +E+ + +V + E F ++ ++ + +L + + +
Sbjct: 170 SFAD-GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILA-AGARDGVLPCGLGA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202
LR + + +I P +A + + K +IGQ V+ R + R+
Sbjct: 228 RDTLRFEACLPLYGQEL-SDSISPVEAGLGF--AVKTEKEPPFIGQAVLKRQKEEGPPRR 284
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
I +P G + D E+G + LA+ + D AI + +
Sbjct: 285 IVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVA--AIGREVE 342
Query: 257 LTVHGVRVKASF 268
+ + G R+KA+
Sbjct: 343 VDIRGKRLKANI 354
>gi|149182931|ref|ZP_01861389.1| aminomethyltransferase [Bacillus sp. SG-1]
gi|148849380|gb|EDL63572.1| aminomethyltransferase [Bacillus sp. SG-1]
Length = 368
Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 106/310 (34%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G ++ +LQ ++T D+ + A+ +A+ G + L+ KIE++ ++
Sbjct: 52 SHMGEIEVKGSGSLEYLQKMMTNDISRIKDGGAQYTAMCYENGGTVDDLLVYKIEDNHYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------WNQEHTFSNSS 114
L ++ + + L + S V + + L+ E T S+
Sbjct: 112 LVVNAANIEKDYQWLQDHVDES-VELNNLSGDYAQLAIQGPLAEQILQKLANETTLSDIG 170
Query: 115 FI----DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPS 163
F + + L+ RT E S + ++ + G +
Sbjct: 171 FFKFQNEVDLNGIKALVSRTGYTGEDGFEIYCPSESASSLWRDI-LKAGEQEGILPCGLG 229
Query: 164 --TIFPHDALMDLLN------------GISL-----TKGCYIGQEVVSRIQHRNIIRKRP 204
+A + L GI + ++G+E + + RK
Sbjct: 230 ARDTLRFEANLALYGQELSADITPIEAGIGFAVKVDKEADFLGKETLKSQKKEGSPRKLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
I +P G + ++ EIG + LA+ + + A+ + +
Sbjct: 290 GIEMLERGIPRHGYKVFLNNEEIGEVTTGTQSPTLKKNIGLALIKTEH--SALDTELHVE 347
Query: 259 VHGVRVKASF 268
+ ++KA
Sbjct: 348 IRNKKLKAKV 357
>gi|327314409|ref|YP_004329846.1| aminomethyltransferase [Prevotella denticola F0289]
gi|326944631|gb|AEA20516.1| aminomethyltransferase [Prevotella denticola F0289]
Length = 361
Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 48/267 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ I T DV LP + P G ++ I K++E ++
Sbjct: 51 SHMGEVIVSGPDADRYINHIFTNDVTGLPAGKVLYGMLCYPDGGVVDDTCICKLDERLYL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI-QPINGVVLSWNQEHTF--------------- 110
+ I+ + D + + +VIIE G + E
Sbjct: 111 MTINAANIDKDMAWIRQNAEGFDVIIENKSDAYGQLAVQGPEAEEKMENVLGLACKELKF 170
Query: 111 --------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
I R +G I +K + +
Sbjct: 171 YEVKRLEKDGEEVIVSRTGYTGEDGFEVYGTPGYI---VKAWDKLMEAGVKPCGLGCRDT 227
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205
LR G+ + I P A + + + K +IG+E + R + I ++ R +
Sbjct: 228 LRFEVGLPLYGDEL-SDKISPVMAGLSMF--VKFDKEEFIGKEALLRQKTEGISQRLRGI 284
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232
+ G + +P G +L D E+G +
Sbjct: 285 ELEG-NAIPRHGYKVLKDGKEVGEVTT 310
>gi|15966027|ref|NP_386380.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021]
gi|307305579|ref|ZP_07585326.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C]
gi|15075297|emb|CAC46853.1| Probable sarcosine dehydrogenase [Sinorhizobium meliloti 1021]
gi|306902282|gb|EFN32878.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C]
Length = 815
Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 58/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + ++ + + +L +G I ++++ + F
Sbjct: 490 MTSFGKIRVEGRDAQAFLQRLCANEMN-VDPGRVVYTQMLNARGGIESDLTVTRLSQTAF 548
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSW------------------NQ 106
L + + + L + +R V+I VL N+
Sbjct: 549 FLVVPGATLQRDLAWLRKH-VRDEFVVITDVTAAESVLCVMGPRARELMQKVSPNDFSNE 607
Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147
H F+ + R + L + ++ A +T
Sbjct: 608 AHPFATAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLELAGADVGLKLCGL 667
Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI D +A + + KG +IG+E V + + R
Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKPGKGEFIGREAVLAKRDNGLSR 724
Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252
+ ++ + L I+ D +GT+ G L + + +
Sbjct: 725 RLVQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVACKGESDADVLA 784
Query: 253 KGMALTVHGVRVKAS 267
+ + G RVKA
Sbjct: 785 SAYEIEIAGTRVKAE 799
>gi|307317520|ref|ZP_07596959.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83]
gi|306896678|gb|EFN27425.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83]
Length = 815
Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 58/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + ++ + + +L +G I ++++ + F
Sbjct: 490 MTSFGKIRVEGRDAQAFLQRLCANEMN-VDPGRVVYTQMLNARGGIESDLTVTRLSQTAF 548
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSW------------------NQ 106
L + + + L + +R V+I VL N+
Sbjct: 549 FLVVPGATLQRDLAWLRKH-VRDEFVVITDVTAAESVLCVMGPRARELMQKVSPNDFSNE 607
Query: 107 EHTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------- 147
H F+ + R + L + ++ A +T
Sbjct: 608 AHPFATAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFETLELAGADVGLKLCGL 667
Query: 148 ------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI D +A + + KG +IG+E V + + R
Sbjct: 668 HTLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKPGKGEFIGREAVLAKRDNGLSR 724
Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIK 252
+ ++ + L I+ D +GT+ G L + + +
Sbjct: 725 RLVQFRLSDPEPLLFHNEAIVRDGEIVGTITSGNYGHHLGGAIGLGYVACKGESDADVLA 784
Query: 253 KGMALTVHGVRVKAS 267
+ + G RVKA
Sbjct: 785 SAYEIEIAGTRVKAE 799
>gi|66044346|ref|YP_234187.1| glycine cleavage system T protein [Pseudomonas syringae pv.
syringae B728a]
gi|63255053|gb|AAY36149.1| Glycine cleavage system T protein [Pseudomonas syringae pv.
syringae B728a]
Length = 374
Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 49/284 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLCRH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFNSVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIA 242
++ G+ I+ + IGT+ G A+
Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLTGPLAMGYL 337
>gi|91202778|emb|CAJ72417.1| similar to T-protein of glycine cleavage system [Candidatus
Kuenenia stuttgartiensis]
Length = 365
Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 53/286 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A F+Q +IT D L K A S + +G I+ ++ K+ + F+
Sbjct: 49 SHMGKFEISGDDAFSFVQQVITNDAAPLSEKQALYSPLCNEKGGIVDDIMVYKMNRNAFL 108
Query: 67 --------------------------------------------LEIDRSKRDSLIDKLL 82
L++ ++ ++ L
Sbjct: 109 FIVNCANTEKDLAWLTEQAKPYWSLKLKNVTDEMSIIALQGPSALQMLKNTLETDFKYLK 168
Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
+ ++ P+ + E + D+ L + + +
Sbjct: 169 RF-CFDEFFLDDLPMIISRTGYTGEDGVEILVDATYALRLWDIFLKKNEAKGLRPVG-LG 226
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ + D T+ P + L+D + K +IG+E + + + K
Sbjct: 227 ARDTLRLEACFMLYGNDM-DETVTPLETLIDWT--VKFGKDSFIGKESLQEQKAGGVKHK 283
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARI 244
+P P+L +IG + KK + +ARI
Sbjct: 284 IIGFEMLDQGIPRHDYPVLKKGEKIGKVTSGTFNPTTKKGIGLARI 329
>gi|254481335|ref|ZP_05094580.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214038498|gb|EEB79160.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 393
Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 87/276 (31%), Gaps = 66/276 (23%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A +L +IT DV + K + +G++L I + + + +
Sbjct: 65 RVTGPDAEAYLNRLITRDVSKIREKRVGYTVWCDDEGQVLDDGTIFHLGPNDYRI----C 120
Query: 73 KRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEH-------------------- 108
ID L L S +V +E + N L+
Sbjct: 121 AYARAIDWL----LWSAEGFDVCVEEETQNVAALAVQGPTSCAALMAMGLSGLDALKPFG 176
Query: 109 ----TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK------------------TYHE 146
F + R L + W EK A D+
Sbjct: 177 IEYFDFEGEQLMVSRTGFTGDLGYELWIAPEK-AEDLWDRLFAAGAPHIIKPFGMEALEM 235
Query: 147 LRINHGIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI G + DF+P+ P + +D L + L K + G++ + + R
Sbjct: 236 ARIETGFIQAGVDFIPAEETIRQGRSRSPFELGLDWL--VDLNKPVFNGRKALLDEKSRG 293
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R R I+ + P + S IL + ++G +
Sbjct: 294 S-RYRFAILDVAGNKPANNSFILKNGKQVGVVTSAA 328
>gi|288926409|ref|ZP_06420330.1| LOW QUALITY PROTEIN: glycine cleavage system T protein [Prevotella
buccae D17]
gi|288336782|gb|EFC75147.1| LOW QUALITY PROTEIN: glycine cleavage system T protein [Prevotella
buccae D17]
Length = 346
Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 40/261 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A ++ I T DV P +L P G + L+ K+ D F
Sbjct: 50 SHMGEVTVRGKDAERYVNQIFTNDVTDAPTGKIYYGMMLYPDGGTVDDLLVYKMGADDFF 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHT-------------- 109
+ I+ + D + + + ++ I++Q G + E
Sbjct: 110 IVINAANIDKDVAWMREHA--ADFDIDLQDRSDFYGQLAVQGPEAEHVMEEVLGLPCSEL 167
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151
+ I R +G +E I + + LR
Sbjct: 168 AFYTVKTIGDAIVSRTGYTGEDGFEIYGSHEFIQTLWDKLMAAGIQPCGLGCRDTLRFEV 227
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + + I P A + + L K +IG+E + + ++RK I
Sbjct: 228 GLPLYGDEL-SAEISPVMAGLGMFC--KLDKPEFIGKEALLHQRAEGVVRKLVGIELADR 284
Query: 212 DLPPSGSPILTDDIEIGTLGV 232
+P G ++ + +IG +
Sbjct: 285 AVPRHGYAVMKNGRQIGEVTT 305
>gi|289649163|ref|ZP_06480506.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 374
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ L + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +TD P A+ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|148243400|ref|YP_001228557.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT)
[Synechococcus sp. RCC307]
gi|147851710|emb|CAK29204.1| Predicted aminomethyltransferase related to glycine cleavage
T-protein (GcvT) [Synechococcus sp. RCC307]
Length = 279
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 101/261 (38%), Gaps = 15/261 (5%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ ++ L T + + +TP +++ ++ + + +L
Sbjct: 22 IPLRGEGSLRVLHGQTTQAIEGAAPGSLIETCCVTPTARLVALAAVAVLSDGADLLVTAG 81
Query: 72 SKRD--SLIDKLLFYKLRSNVII-EIQPI--NGVVLSWNQEHTFSNSSFIDERFSIADVL 126
S +D++LF R V + E Q + +G+V + S
Sbjct: 82 SPAQVHQSLDRVLFPADR--VALGEPQALLWHGLVQPGGEPGGAGWSLPGQHWLLAEGEA 139
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
L ++ ++ +LRI+ GI P + P + + +SL KGCY+
Sbjct: 140 LPEPLMAAAALS--LEQQEQLRIHQGIPAPGAEL-REEFNPFELGLRQR--VSLEKGCYL 194
Query: 187 GQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDDIEIGT-LGVVVGKKALAIAR 243
GQE ++++ R+ +++ R ++ D P G + T E G + V G + L +
Sbjct: 195 GQETLAKLHSRDGLKQQLRRFVVADGADAPEPGQQLRTTSGERGALVTSVRGGRGLLLLH 254
Query: 244 IDKVDHAIKKGMALTVHGVRV 264
D + G+ L++
Sbjct: 255 RRCWDQSELAGLKLSLPEAAA 275
>gi|289623812|ref|ZP_06456766.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|298485822|ref|ZP_07003900.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159646|gb|EFI00689.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330867849|gb|EGH02558.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 374
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ L + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +TD P A+ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPEERTPVREGTEIVDEQGAVIGTVCS--GGFGPSLAGPLAMGYLNNAYTALDTQVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|288929409|ref|ZP_06423254.1| glycine cleavage system T protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288329511|gb|EFC68097.1| glycine cleavage system T protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 363
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 47/267 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A ++ I T D+ P +L P G + L+ K+ E+ F
Sbjct: 51 SHMGEVYITGNEAEKYVNHIFTNDIAGAPVGKVFYGMMLYPDGGTVDDLLVYKLGENEFF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH----------------- 108
L I+ + D +D + +V I+ G + E
Sbjct: 111 LVINAANIDKDVDWIRQNATGYDVAIDHCSDYYGQLAVQGPEAEQVMEEVLGLACKDLEF 170
Query: 109 ------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
++ I R +G +E I ++ + +
Sbjct: 171 YTAKTIATHGANVIVSRTGYTGEDGFEIYGPHEFI---VEQWDKLMASKRCVPCGLGCRD 227
Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR G+ + + I P A + L K +IG+E V++ + + +K
Sbjct: 228 TLRFEVGLPLYGDEL-SNEISPVMAGFSMFC--KLDKEEFIGKEAVAKQKADGVEKKVVG 284
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232
I +P G ++ D +++G +
Sbjct: 285 IELKDKAIPRHGYDVVKDGVKVGEVTT 311
>gi|315607198|ref|ZP_07882202.1| glycine cleavage system T protein [Prevotella buccae ATCC 33574]
gi|315251252|gb|EFU31237.1| glycine cleavage system T protein [Prevotella buccae ATCC 33574]
Length = 359
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 86/261 (32%), Gaps = 40/261 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A ++ I T DV P +L P G + L+ K+ D F
Sbjct: 51 SHMGEVTVRGKDAERYVNHIFTNDVTDAPTGKIYYGMMLYPDGGTVDDLLVYKMGADDFF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHT-------------- 109
+ I+ + D + + + ++ I++Q G + E
Sbjct: 111 IVINAANIDKDVAWMREHA--ADFDIDLQDRSDFYGQLAVQGPEAEHVMEEVLGLPCSEL 168
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151
+ I R +G +E I + + LR
Sbjct: 169 AFYTVKTIGDAIVSRTGYTGEDGFEIYGSHEFIQTLWDKLMAAGIQPCGLGCRDTLRFEV 228
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + I P A + + L K +IG+E + + ++RK I
Sbjct: 229 GLPLYGDELSTE-ISPVMAGLGMFC--KLDKPEFIGKEALLHQRAEGVVRKLVGIELADR 285
Query: 212 DLPPSGSPILTDDIEIGTLGV 232
+P G ++ + +IG +
Sbjct: 286 AVPRHGYAVMKNGRQIGEVTT 306
>gi|255655674|ref|ZP_05401083.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-23m63]
gi|296451676|ref|ZP_06893409.1| glycine dehydrogenase [Clostridium difficile NAP08]
gi|296878920|ref|ZP_06902920.1| glycine dehydrogenase [Clostridium difficile NAP07]
gi|296259507|gb|EFH06369.1| glycine dehydrogenase [Clostridium difficile NAP08]
gi|296430192|gb|EFH16039.1| glycine dehydrogenase [Clostridium difficile NAP07]
Length = 824
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 95/314 (30%), Gaps = 50/314 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++
Sbjct: 52 SHMGEVQIKGVESEKFIQNLVTNDISTLNINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID-------- 117
L I+ D + ++ R NV I+ I + + D
Sbjct: 112 LVINAGNIDKDVAWIIKQSERYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKF 171
Query: 118 ----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTYH 145
R + G + + +
Sbjct: 172 YKSIPSVKVCGCPCLVSRTGYTGEDGFEIYCENKYAEIIWNEVLKVGGEDICPAGLGCRD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR + + I P + + + + K +IG+ ++S+ + RK
Sbjct: 232 TLRFEAALPLYGHEI-NEHISPVEGGLSIF--VKTNKESFIGKSILSKEKENGAKRKLVG 288
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTV 259
+P +G I D +G + + I + + G+A+
Sbjct: 289 FEMQGKGMPRNGYDIRIGDKIVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRK 348
Query: 260 HGVRVKASFPHWYK 273
V + +YK
Sbjct: 349 KVVPAVIAKKPFYK 362
>gi|331015229|gb|EGH95285.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 374
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + +
Sbjct: 55 SHMGQIRLSGADAAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L IE+ +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGRCEIELLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353
Query: 259 VHGVRVKASF 268
V + +
Sbjct: 354 GKKVPMLVTK 363
>gi|256371902|ref|YP_003109726.1| glycine cleavage system T protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256008486|gb|ACU54053.1| glycine cleavage system T protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 349
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 95/285 (33%), Gaps = 39/285 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A LQA +T D+ + + A+ + +L G +L ++ ++ + F
Sbjct: 51 SHLGTVVVEGPDAFDRLQATLTNDLRKIGPQRAQYTHLLDVDGSVLDDIIVWWVDRERFH 110
Query: 67 LEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWN---QEHTFSNSSFIDERFSI 122
+ + + +++ L RS I+ +Q L + + + R
Sbjct: 111 VMPNAANTENVTAALGGRDITRSRCILALQGPGAAALLGPLLEGAEPPARNRIVTGRIGD 170
Query: 123 ADVLLHRT-----------------------WGHNEKIASDIKTYHELRINHGIVDPNTD 159
+V + T +A + LR+ G+ +
Sbjct: 171 IEVRVAGTGYTGGPGVELEVAPDDAVALMERLLERGAVACGLGARDSLRLEAGLPLHGNE 230
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
P + P +A + + ++ KG + G+E + Q + + + PP
Sbjct: 231 LGPG-LTPLNAGLGWV--VAFEKGPFPGREALLAQQAAGVNP-ILIGVRSLTRQPPRAHD 286
Query: 220 ILTD--DIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMA 256
+L D +G++ G LA + + A
Sbjct: 287 VLVDAASTAVGSISSGGYSPLAGVGIGLAYVDPEAAAGPFRAVRA 331
>gi|330969231|gb|EGH69297.1| glycine cleavage system T protein [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 374
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LAVNAACKDQDLAHLCRH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFNNVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240
++ G+ I+ + IGT+ +LA
Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLA 329
>gi|296188241|ref|ZP_06856633.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|296047367|gb|EFG86809.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 359
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 105/312 (33%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+Q ++T D+ +L A + + P G ++ L+ K+ E+ ++
Sbjct: 52 SHVGKIQIKGKDAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYL 111
Query: 67 LEIDRS-----------------------------------KRDSLIDKLL-------FY 84
+ I+ K ++++ KL Y
Sbjct: 112 ITINSGNVKRIFKWLINKKNKHDVSIINISNEICELALQGPKSETILQKLTDIDLKEIKY 171
Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
R +V I + E F + + + + + + +
Sbjct: 172 LSFRKDVSICDTKCLLSRTGYTGEDGFEIY-ILPKDLELLWNSILKAGREEGIKPAGLCV 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR++ + + L I P +A + ++L K +IG+ + + + I RK
Sbjct: 231 RDALRLDSNLPPFGDELL-EDITPFEAGL--KTYVNLRKNDFIGKNALKKESEKGIKRKI 287
Query: 204 PMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
TG SGS ++ + ++G + LA+ + +
Sbjct: 288 VKFETGDKCTNEISGSNVIFNGEKVGIVATEQFSPKKKKNMGLALVDLKYSKLGTTIFIK 347
Query: 257 LTVHGVRVKASF 268
V+ K +
Sbjct: 348 DMNDLVKAKVTR 359
>gi|255523308|ref|ZP_05390278.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|255512962|gb|EET89232.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 381
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 105/312 (33%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+Q ++T D+ +L A + + P G ++ L+ K+ E+ ++
Sbjct: 74 SHVGKIQIKGKDAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYL 133
Query: 67 LEIDRS-----------------------------------KRDSLIDKLL-------FY 84
+ I+ K ++++ KL Y
Sbjct: 134 ITINSGNVKRIFKWLINKKNKHDVSIINISNEICELALQGPKSETILQKLTDIDLKEIKY 193
Query: 85 -KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
R +V I + E F + + + + + + +
Sbjct: 194 LSFRKDVSICDTKCLLSRTGYTGEDGFEIY-ILPKDLELLWNSILKAGREEGIKPAGLCV 252
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR++ + + L I P +A + ++L K +IG+ + + + I RK
Sbjct: 253 RDALRLDSNLPPFGDELL-EDITPFEAGL--KTYVNLRKNDFIGKNALKKESEKGIKRKI 309
Query: 204 PMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
TG SGS ++ + ++G + LA+ + +
Sbjct: 310 VKFETGDKCTNEISGSNVIFNGEKVGIVATEQFSPKKKKNMGLALVDLKYSKLGTTIFIK 369
Query: 257 LTVHGVRVKASF 268
V+ K +
Sbjct: 370 DMNDLVKAKVTR 381
>gi|254852603|ref|ZP_05241951.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-503]
gi|254932337|ref|ZP_05265696.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262]
gi|300765412|ref|ZP_07075394.1| glycine cleavage system T protein [Listeria monocytogenes FSL
N1-017]
gi|258605917|gb|EEW18525.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-503]
gi|293583893|gb|EFF95925.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262]
gi|300513849|gb|EFK40914.1| glycine cleavage system T protein [Listeria monocytogenes FSL
N1-017]
gi|328475065|gb|EGF45853.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 220]
gi|332311789|gb|EGJ24884.1| Aminomethyltransferase [Listeria monocytogenes str. Scott A]
Length = 362
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ EIG + LA+ ID I + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|26987722|ref|NP_743147.1| glycine cleavage system T protein [Pseudomonas putida KT2440]
gi|24982410|gb|AAN66611.1|AE016288_10 glycine cleavage system T protein [Pseudomonas putida KT2440]
Length = 373
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L++++ D++ LP + R + QG IL +++ + EDT
Sbjct: 54 SHMGQIILRGADAAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + ++ + L + ++ +Q V + + +F+
Sbjct: 114 LVVNAACKEQDLAHLQTHIGSRCEVQPLFEERALLALQGPAAVKVLERLAPEVAGMTFMQ 173
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R + AD L R E + LR+
Sbjct: 174 FRRVKLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLMAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC----YIGQEVVSRIQHRNIIRKRPMI 206
G+ D T +L+ ++ + G + G E + + RKR +
Sbjct: 234 AGLCLYGHDMNSETTPIEASLLWAISKVRRADGARAAGFPGAEAIFAHVRDGVARKRVGL 293
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ +D +G + G +A+ ID A+ + V
Sbjct: 294 LPQERTPVREGADIVDANDKPVGKVCS--GGFGPTLAAPVAMGYIDSEHAALDTALFAVV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKKVALKV 360
>gi|226223949|ref|YP_002758056.1| aminomethyltransferase [Listeria monocytogenes Clip81459]
gi|259647494|sp|C1L2Q4|GCST_LISMC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|225876411|emb|CAS05120.1| Putative aminomethyltransferase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
Length = 362
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEVGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ EIG + LA+ ID I + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|303234821|ref|ZP_07321446.1| aminomethyltransferase [Finegoldia magna BVS033A4]
gi|302493939|gb|EFL53720.1| aminomethyltransferase [Finegoldia magna BVS033A4]
Length = 364
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 53/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+
Sbjct: 51 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
+ + + + + Y +E++ I+ V + +
Sbjct: 111 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 168
Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146
D ++ DVL+ RT E + +K + E
Sbjct: 169 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYANAEAIVKLWDELLEKGKDLGVKPCGLG 228
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR + + + P + + + + K ++G+ I +K
Sbjct: 229 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 285
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
I + + G+ + D IG + LA A +DK A+ + +
Sbjct: 286 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 345
Query: 259 VHGVRVKASF 268
+ KA+
Sbjct: 346 IRNKPAKATV 355
>gi|169824159|ref|YP_001691770.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328]
gi|167830964|dbj|BAG07880.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328]
Length = 366
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 53/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+
Sbjct: 53 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
+ + + + + Y +E++ I+ V + +
Sbjct: 113 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 170
Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146
D ++ DVL+ RT E + +K + E
Sbjct: 171 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYANAEAIVKLWDELLEKGKDLGVKPCGLG 230
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR + + + P + + + + K ++G+ I +K
Sbjct: 231 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 287
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
I + + G+ + D IG + LA A +DK A+ + +
Sbjct: 288 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 347
Query: 259 VHGVRVKASF 268
+ KA+
Sbjct: 348 IRNKPAKATV 357
>gi|290893543|ref|ZP_06556526.1| glycine cleavage system T protein [Listeria monocytogenes FSL
J2-071]
gi|290556888|gb|EFD90419.1| glycine cleavage system T protein [Listeria monocytogenes FSL
J2-071]
Length = 362
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100
L ++ + + ++ Y K+ + + +++ I+
Sbjct: 112 LVVNAANTAKDFEWMVKNIQGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSIS-- 169
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147
+ ++ + I R + + + L
Sbjct: 170 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 230 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 286
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260
+P P+ +D EIG + LA+ ID + + + + +
Sbjct: 287 ELIERGIPRHDYPVFLNDKEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 344
Query: 261 GVRVKASF 268
++KA
Sbjct: 345 NKKIKAKI 352
>gi|299823010|ref|ZP_07054896.1| aminomethyltransferase [Listeria grayi DSM 20601]
gi|299816539|gb|EFI83777.1| aminomethyltransferase [Listeria grayi DSM 20601]
Length = 364
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 108/315 (34%), Gaps = 53/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G+ ++ FLQ ++T ++ L A+ + + P G + ++ ++ ED F+
Sbjct: 52 SHMGEIEISGEKSVAFLQHLLTNNIEKLAIGRAQYTIMCYPDGGTVDDLVVYRLAEDKFL 111
Query: 67 LEIDRS--------------KRDSLIDK--------LLFYK----LRSNVIIEIQPINGV 100
++ + L ++ L K L+ V I+I I
Sbjct: 112 AVVNAANISKDWEWMIGNNGIGAELKNRSGEISQLALQGPKAAELLQKEVSIDIAKIP-- 169
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HEL 147
+ + + + + +NE S + L
Sbjct: 170 FFGFQENVELFGCQVLLSKSGYTGEDGFEIYLNNEDAISVWEALVAKGAKPIGLGARDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ + + + I P +A + + L K +IG+E + + ++ + RK I
Sbjct: 230 RLEAVLALYGQELSQN-ISPLEAGLSF--AVKLQKEADFIGKEALIKQKNDGLKRKSVGI 286
Query: 207 ITGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ G P+ + EIG + ALA+ D + + +
Sbjct: 287 EMIDRGIARHGYPVYDAAGEKEIGEITSGGPSPSLDKNIALALIESDYAQEGEELVIGIR 346
Query: 259 VHGVRVKASFPHWYK 273
++ K +YK
Sbjct: 347 AKKLKAKIIPTPFYK 361
>gi|227822723|ref|YP_002826695.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium
fredii NGR234]
gi|227341724|gb|ACP25942.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium
fredii NGR234]
Length = 815
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 58/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A+ FLQ + ++ + + +L +G I ++++ E F
Sbjct: 490 MTSFGKIRVEGRDALAFLQRLCANELN-VEPGRIVYTQMLNARGGIESDLTVTRLSETAF 548
Query: 66 ILEIDRSKRDSLIDKLLFY-----------------------KLRS---NVIIEIQPING 99
+L + + + L + K R V
Sbjct: 549 LLIVPGATLQRDLAWLRKHLGDEFVVITDATAAESVLCVMGPKARELMQKVSPNDFSNEA 608
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
+E R + L + ++ A +T E
Sbjct: 609 HPFGAAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHIFETLEEAGRDVGLKLCGLH 668
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI D +A + + + KG +IG+E V + + +
Sbjct: 669 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKVDKGDFIGREAVL-TKQDEDLSR 724
Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIK 252
R + TD P I+ + +GT+ G L + +
Sbjct: 725 RLVQFRLTDPEPLLFHNEAIVRNGEIVGTITSGNYGHHLGGAIGLGYVPCSGESAADVLA 784
Query: 253 KGMALTVHGVRVKAS 267
+ + G RVKA
Sbjct: 785 SSYEIEIAGTRVKAE 799
>gi|223938760|ref|ZP_03630649.1| glycine cleavage system T protein [bacterium Ellin514]
gi|223892611|gb|EEF59083.1| glycine cleavage system T protein [bacterium Ellin514]
Length = 380
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/328 (14%), Positives = 99/328 (30%), Gaps = 68/328 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A FL +T D+ L + + + QG ++ ++ + ++
Sbjct: 50 SHMGEVLVSGSGAEEFLNHTLTNDIRKLAVGGGQYTLMCNEQGGVIDDLYAYRLAGEEYL 109
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPIN--GVVLSWNQEHTFSNSSFID--- 117
L I+ S+ D L +L + +++V ++ V L + F N F
Sbjct: 110 LIINASRIDVDVPWLESQLAAFAKKNSVTLKNTSEQTGAVALQGPRVSEFINQCFPGTAS 169
Query: 118 ----------------ERFSIADVLLH--RTWGHNEK----------------------- 136
RFS + + RT E
Sbjct: 170 GGTAVASPSELKKNQIARFSFSGKPVWVSRTGYTGEDGFEIVAPAEIIGEVWSRIMTIGH 229
Query: 137 ----IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+ + LR + T P +A + +S KG ++G+ V++
Sbjct: 230 QYCLQPAGLGARDTLRTEVCYPLYGHELDEQTT-PIEAGLGFF--VSFDKGDFVGRAVLA 286
Query: 193 RIQHRNIIRKRPMIITGTDDLPP---------SGSPILTDDIEIGTLGVVVGK-KALAIA 242
+ + +K PP +P+ ++ GT +G +
Sbjct: 287 GQKASGVTKKCIAFKMTDKSAPPRPHYPIWSTGPNPVQIGEVVSGTQSPSLGNGIGMGYV 346
Query: 243 RIDKVDHAIKKGMALTVH-GVRVKASFP 269
+ + + + + S P
Sbjct: 347 KTEFAKAQTPIEIEIRGKRAAALIVSKP 374
>gi|67924499|ref|ZP_00517920.1| Glycine cleavage system T protein [Crocosphaera watsonii WH 8501]
gi|67853646|gb|EAM48984.1| Glycine cleavage system T protein [Crocosphaera watsonii WH 8501]
Length = 364
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 47/311 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G+ + LQ+++ +D+ L A+ + +L P G I+ ++ D +
Sbjct: 53 SHMAKFSLEGEGWLSLLQSLVPSDLSRLNPGQAQYTVLLNPDGGIIDDIIVYCQGPDKAV 112
Query: 67 LEIDRSKRDS----LIDKLLFYKL-RS-----NVIIEIQPINGV---------------V 101
+ + + +D ++ L +K+ S V++ +Q V
Sbjct: 113 IIANAATKDKDKQWILSHLGTHKVNFSDLSPEKVLLAVQGPQTVEKLQPFVEADLTQLSF 172
Query: 102 LSWNQEHTFSNSSFI-------DERFSI-----ADVLLHRTWGHNEKIASDIKTYHELRI 149
+ +FI ++ F + L R+ + LR+
Sbjct: 173 FGHIETQVLGYPAFIARTGYTGEDGFEVMIASEGGQELWRSLIEANVSPCGLGARDTLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ D P +A + L + K +IG+EV+ + Q +++R + +
Sbjct: 233 EAAMCLYGQDI-DDRTTPLEAGLKWLVHLD-KKEQFIGREVLEK-QATEGVKRRLVGLQM 289
Query: 210 TDDLPPSGS-PILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGV 262
P+ + +G + +LA + + +
Sbjct: 290 EGRHIARHDYPVASGGKIVGEVTSGTIGPTLGKAISLAYLPTELSKKGTTVEVEIRGKLY 349
Query: 263 RVKASFPHWYK 273
K +Y+
Sbjct: 350 PAKVVKKPFYR 360
>gi|330963181|gb|EGH63441.1| glycine cleavage system T protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 374
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 101/311 (32%), Gaps = 51/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELM 114
Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + +D + L ++ R+ ++ +Q V + ++ +F
Sbjct: 115 LVVNAACKDQDLAHLREHLAGHCEIEPLFEQRA--LLALQGPAAVTVLARMAPEVAHMTF 172
Query: 116 ---------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I A+ L R E + LR
Sbjct: 173 MQFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 233 LEAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRV 292
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMAL 257
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 293 GLLPQERTPVREGTQIVNDQDVAIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWARV 352
Query: 258 TVHGVRVKASF 268
V + +
Sbjct: 353 RGKKVPMLVTK 363
>gi|330975731|gb|EGH75797.1| glycine cleavage system T protein [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 374
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVTLLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKALA 240
++ G+ I+ + IGT+ +LA
Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329
>gi|301384646|ref|ZP_07233064.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
Max13]
gi|302058901|ref|ZP_07250442.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
K40]
gi|302133014|ref|ZP_07259004.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 374
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + +
Sbjct: 55 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 173
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 294 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353
Query: 259 VHGVRVKASF 268
V + +
Sbjct: 354 GKKVPMLVTK 363
>gi|254824593|ref|ZP_05229594.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-194]
gi|255520218|ref|ZP_05387455.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-175]
gi|293593831|gb|EFG01592.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-194]
Length = 362
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ EIG + LA+ ID I + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345
Query: 262 VRVKASF 268
++KA
Sbjct: 346 KKIKAKI 352
>gi|260909727|ref|ZP_05916421.1| glycine cleavage system T protein [Prevotella sp. oral taxon 472
str. F0295]
gi|260636152|gb|EEX54148.1| glycine cleavage system T protein [Prevotella sp. oral taxon 472
str. F0295]
Length = 363
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 55/271 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A ++ I T DV P +L P G + L+ K+ E+ F
Sbjct: 51 SHMGEVYITGNEAEKYVNHIFTNDVAGAPIGKVFYGMMLYPDGGTVDDLLVYKLGENEFF 110
Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110
L I+ + D +D + Y +V I+ L+
Sbjct: 111 LVINAANIDKDVDWMRQNAEGY----DVAIDHCSDYYAQLAVQGPEAEQVMEEVLGLTCK 166
Query: 111 ------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
+ ++ + R +G +E I ++ + +
Sbjct: 167 ELEFYTAKTIANNGANIVVSRTGYTGEDGFEIYGPHEFI---VEQWDKLMASKRSVPCGL 223
Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR G+ + + I P A + L K +IG+E V++ + + +
Sbjct: 224 GCRDTLRFEVGLPLYGDEL-SNEISPVMAGFSMFC--KLDKEEFIGKEAVAKQKADGVEK 280
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
K I +P G ++ D +++G +
Sbjct: 281 KVVGIELKDKAIPRHGYDVMKDGVKVGEVTT 311
>gi|295681427|ref|YP_003610001.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002]
gi|295441322|gb|ADG20490.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002]
Length = 832
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 63/321 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ + + V G+ A LQ I+ DV +P + +L +G ++++ +D +
Sbjct: 496 MSSFAKLLVKGRDAEAVLQGIVANDVA-VPPGTTVYTGVLNKRGNYESDLTLTRLADDQY 554
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS----------------WNQE 107
++ ++ +D L V++++ V+ W E
Sbjct: 555 LVVTGSAQATRDLDYLEKAIAPERHCVVVDVTSQYAVLAVMGPHARALLQSVSKADWRNE 614
Query: 108 HTFSN---------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
++ R S L + E +T H
Sbjct: 615 AFPFGQSREIDIGYATVRATRLSYVGELGWELYVPVEFAVGVYETLHAAGKLFGLVNAGY 674
Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNII 200
LRI G + P P +A + L K + G++ + R++ +
Sbjct: 675 YAIESLRIEKGYRAWGRELSPD-CNPFEAGLAF--ACKLDKDIDFRGRDALLRLR-DAPL 730
Query: 201 RKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
R+R +I+T + G IL D +G + L A+ +++ D A
Sbjct: 731 RRRLVILTVDGAEHLMLWGGEAILRDGEPVGAVTSAAFGHTLRCPVAMGFVNRADGAADA 790
Query: 254 ------GMALTVHGVRVKASF 268
+ V G +V+AS
Sbjct: 791 AWLAQGRYTIDVAGEQVRASV 811
>gi|77460615|ref|YP_350122.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf0-1]
gi|77384618|gb|ABA76131.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens Pf0-1]
Length = 374
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 100/308 (32%), Gaps = 51/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +A L+ ++ D++ LP + R + G IL +++ + D
Sbjct: 55 SHMGQIRLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELF 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLQKH-IGDQCKIEQLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L E A + LR+
Sbjct: 174 QFTRVKLLGVDCFVSRSGYTGEDGFEISVPAVDAEKLARALLAEPEVAAIGLGARDSLRL 233
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D NT+ P A+ G + G E V Q + RKR
Sbjct: 234 EAGLCLYGHDMNTETTPIEASLLWAISKPRRADGARAGGFPGAEQVFAQQQNGVSRKRVG 293
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV-GKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + EI +G V G LA+ +D A+ +
Sbjct: 294 LLPQERTPVREGAEIVNEAGEI--IGSVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAI 351
Query: 259 VHGVRVKA 266
V G +V
Sbjct: 352 VRGKKVPL 359
>gi|46907574|ref|YP_013963.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes serotype 4b str. F2365]
gi|47093626|ref|ZP_00231383.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b
H7858]
gi|254992321|ref|ZP_05274511.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J2-064]
gi|59797786|sp|Q71ZX4|GCST_LISMF RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|46880842|gb|AAT04140.1| glycine cleavage system T protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47018002|gb|EAL08778.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b
H7858]
Length = 362
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPSAEKILAKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ EIG + LA+ ID I + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTEIGQEVEVGIRN 345
Query: 262 VRVKASF 268
++KA
Sbjct: 346 KKIKAKI 352
>gi|330811373|ref|YP_004355835.1| aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379481|gb|AEA70831.1| Aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 374
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 102/307 (33%), Gaps = 49/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D
Sbjct: 55 SHMGQIRLTGAGAAKALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
L ++ + +D + L + + ++ +Q V + + +F
Sbjct: 115 LVVNAACKDQDLAHLRAHIGAQCSIEPLFEARALLALQGPAAVTVLARLAPDVAKMTFMQ 174
Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I + A+ L E A + LR+
Sbjct: 175 FQRVTLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSLRLE 234
Query: 151 HGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
G+ D NT+ P A+ + G + G E V Q + RKR +
Sbjct: 235 AGLCLYGHDMNTETTPIEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVKRKRVGL 294
Query: 207 ITGTDDLPPSGSPILTDDIE-IGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ + E IGT+ G LA+ +D A+ + V
Sbjct: 295 LPQERTPVREGAEIVNEAGEIIGTVCS--GGFGPTLGGPLAMGYLDSAYVALDTPVWAIV 352
Query: 260 HGVRVKA 266
G +V
Sbjct: 353 RGKKVPL 359
>gi|17232101|ref|NP_488649.1| glycine cleavage system aminomethyltransferase T [Nostoc sp. PCC
7120]
gi|24636860|sp|Q8YNF7|GCST_ANASP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|17133746|dbj|BAB76308.1| glycine cleavage system protein T [Nostoc sp. PCC 7120]
Length = 376
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 96/277 (34%), Gaps = 44/277 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ + GK+ I LQ ++ +D+ L A+ + +L PQG I+ ++ ED
Sbjct: 59 SHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDDIIVYYQGEDNTG 118
Query: 64 --TFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGV----------- 100
+ ++ + ++ L +++ + V+I IQ +
Sbjct: 119 TQQAFIIVNAATTSKDKAWILSHLDQNQVQFQDISPAKVLIAIQGPKAIGYLQPFVQQNL 178
Query: 101 ----VLSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144
+ + FI V L R+ I +
Sbjct: 179 QPIKAFGHLEATVLGQAGFIARTGYTGEDGFEILVDPEVGVELWRSLYDAGVIPCGLGAR 238
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + D +T P +A + L + TKG +IG+ V+ + + + R+
Sbjct: 239 DTLRLEAAMALYGQDIDDNTT-PLEAGLGWLVHLD-TKGDFIGRSVLEQQKATGVQRRLI 296
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ T ++ G +L+D +G + L
Sbjct: 297 GLQTQGRNIARHGYQVLSDGKVVGGVTSGTLSPTLGY 333
>gi|46445915|ref|YP_007280.1| glycine cleavage system T protein [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399556|emb|CAF23005.1| probable glycine cleavage system T protein [Candidatus
Protochlamydia amoebophila UWE25]
Length = 344
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 47/283 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A FL + T ++ A + QG + +I + F
Sbjct: 33 SHMGKIDVRGPDAERFLDYLSTNRIMGKGSNTATYTVWCNSQGGSIDDVIIYRHSSTYFF 92
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111
+ ++ S R + + V I+ Q N +L+ +F
Sbjct: 93 VIVNASNRQKDLAHMQKQAAEFQVTIQPQFENSGILALQGPFSFPLVDMLFPGNLSLKPM 152
Query: 112 --------NSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHE 146
+ I R +G NE+I S +
Sbjct: 153 SFTSIQELDQPLILSRTGYTGAGGFEFYGTNEQIISLWDRLLNTGKTFGIEPIGLGARDT 212
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G + TI P +++ + K ++G++ + ++ I R +
Sbjct: 213 LRLEMGFALYGHEI-SDTIAPTESVSAW--AVKFDKTDFLGKQALKSLEATPIKRMAYGV 269
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ G PI D I IG + +A+A+ +D
Sbjct: 270 KLKEPGIARQGYPIFKDGIRIGEVTSGSISPSLNEAVALILVD 312
>gi|296159844|ref|ZP_06842665.1| FAD dependent oxidoreductase [Burkholderia sp. Ch1-1]
gi|295889827|gb|EFG69624.1| FAD dependent oxidoreductase [Burkholderia sp. Ch1-1]
Length = 831
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 63/280 (22%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69
V G+ A LQ I+ DV +P + +L +G F ++++ +D ++L
Sbjct: 509 VKGRDAQSVLQGIVANDVD-VPTGATVYTGMLNERGGYESDFTLTRLADDQYLLVTGSAQ 567
Query: 70 ---DRSKRDSLI---DKLLF------YKL------RSN-----VIIEIQPINGVVLSWNQ 106
D + I Y + RS V ++
Sbjct: 568 TTRDFDTIERAIPHDKHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149
E ++ R + L + E +T H LRI
Sbjct: 628 EVDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-----IQHRNI-IRKR 203
G + P T P +A G+S C +G+++ R ++ R +R+R
Sbjct: 688 EKGYRAWGRELTPDT-NPFEA------GLSF--ACKLGKDIAFRGRDALLKLRAEPLRRR 738
Query: 204 PMIITGTDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240
+++T G IL D +G + L
Sbjct: 739 MVVLTADGAAQRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778
>gi|315303009|ref|ZP_07873723.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596]
gi|313628616|gb|EFR97035.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596]
Length = 362
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 105/312 (33%), Gaps = 49/312 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ ++ E ++
Sbjct: 52 SHMGEIIVEGAESTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYRLSETKYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL----------------------- 102
L ++ + + D ++ +R +V + ++ G +
Sbjct: 112 LVVNAANTEKDFDWIVK-NVRGDVTVSDVSSKYGQLALQGPDAEKILAKLTNIDLNAISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELR 148
+ ++ + I R + ++ + + LR
Sbjct: 171 FGFVEDAEIAGVKTIISRSGYTGEDGFEIYMPSDDATKVFEAIMAEKVLPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLTRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ D +IG + LA+ I + + + +
Sbjct: 288 LIERGIPRHDYPVFLDGKQIGVVTSGTQSPTLGTNIGLALIDIAHTELGQEIEIGIRNKK 347
Query: 262 VRVKASFPHWYK 273
V+ K +YK
Sbjct: 348 VKAKVVATPFYK 359
>gi|28868486|ref|NP_791105.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851724|gb|AAO54800.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 409
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + +
Sbjct: 90 SHMGQIRLSGADAAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 149
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L IE +L+ + + + +
Sbjct: 150 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 208
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 209 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 268
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 269 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 328
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 329 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 388
Query: 259 VHGVRVKASF 268
V + +
Sbjct: 389 GKKVPMLVTK 398
>gi|302380835|ref|ZP_07269298.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3]
gi|302311330|gb|EFK93348.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3]
Length = 364
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 53/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+
Sbjct: 51 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
+ + + + + Y +E++ I+ V + +
Sbjct: 111 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVDYDLSKI 168
Query: 117 -------DERFSIADVLLHRTWGHNEK-------IASDIKTYHE---------------- 146
D ++ DVL+ RT E + +K ++E
Sbjct: 169 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYATAEAIVKLWNELLEKGKDLGVKPCGLG 228
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR + + + P + + + + K ++G+ I +K
Sbjct: 229 CRDTLRFEAAMPLYGNEL-SDEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKIDAGINKK 285
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
I + + G+ + D IG + LA A +DK A+ + +
Sbjct: 286 LIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDVV 345
Query: 259 VHGVRVKASF 268
+ KA+
Sbjct: 346 IRNKPAKATV 355
>gi|326388269|ref|ZP_08209872.1| putative oxidoreductase protein [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207435|gb|EGD58249.1| putative oxidoreductase protein [Novosphingobium nitrogenifigens
DSM 19370]
Length = 817
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 102/319 (31%), Gaps = 63/319 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G+ A+ L + ++ +P + L P+G I I+++ E +F++ S
Sbjct: 494 HVEGRDALAVLNRLSANEID-VPVGKLVYTQWLNPRGGIEADVTITRLSETSFMVVTIAS 552
Query: 73 KRDSLIDKLLFYK---------------------------LRSNVIIEIQPINGVVLSWN 105
+ + L + L + V +
Sbjct: 553 SQRRDMAWLKRHIPDDAHVFAVDVTSGLPALAVMGPKSRDLLAAVSPADFSNEAFPFGTS 612
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------LR 148
+E + R + L + E + + + ++ LR
Sbjct: 613 REIDLGYARVRANRVTFVGELGWELFIPAEFATHVFDTLVAAGEAFNLGHAGYFALNSLR 672
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207
+ G + D P + + ++ K G +IG+E + R + R+R + +
Sbjct: 673 MEKGYRHWSHDIGEEDT-PLEGGLGF--AVAFDKPGGFIGREALLRQKEAGKPRRRLVQL 729
Query: 208 TGTDDLPP---SGSPILTDDIEIGTLGVVVGKK----ALAIARIDK---VDHAIKKGMAL 257
D L P PI + D IG++ +L + I+ VD A +L
Sbjct: 730 RLKDPLAPFVYHNEPIWSGDRIIGSVTSGAYGHRIGASLGMGYIEHPEGVDQAFLDAQSL 789
Query: 258 TVHGV----RVKASFPHWY 272
V V+AS WY
Sbjct: 790 EVEIAWKRYPVEASLKPWY 808
>gi|116872779|ref|YP_849560.1| glycine cleavage system aminomethyltransferase T [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123463749|sp|A0AIE9|GCST_LISW6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|116741657|emb|CAK20781.1| glycine cleavage system T protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 362
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID-------- 117
L ++ + + + ++ +R +V + + G + S D
Sbjct: 112 LVVNAANTEKDFEWMVQ-NVRGDVTVTNVSAEYGQLALQGPSAEKILSKLTDVDLSSISF 170
Query: 118 ----------------ERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
R + + + LR
Sbjct: 171 FGFIEDVEVAGVKTIISRSGYTGEDGFEIYMASADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLTRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ +D E+G + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNDKEVGIVTSGTQSPTFGTNIGLAL--IDTAYAELGQELEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|213968380|ref|ZP_03396524.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
gi|213927018|gb|EEB60569.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
Length = 409
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + + +
Sbjct: 90 SHMGQIRLSGADAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELM 149
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
L ++ + +D + L + L IE +L+ + + + +
Sbjct: 150 LVVNAACKDQDLAHLRKH-LAGRCEIEPLFEQRALLALQGPAAVTVLARLAPEVAHMTFM 208
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 209 QFTRVTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 268
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 269 EAGLCLYGHDMDTQTSPIQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAG 328
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D D+ IGT+ G A+ D +
Sbjct: 329 LLPQERTPVREGTQIVNDQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 388
Query: 259 VHGVRVKASF 268
V + +
Sbjct: 389 GKKVPMLVTK 398
>gi|260430128|ref|ZP_05784103.1| sarcosine dehydrogenase [Citreicella sp. SE45]
gi|260419051|gb|EEX12306.1| sarcosine dehydrogenase [Citreicella sp. SE45]
Length = 816
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 96/310 (30%), Gaps = 58/310 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G+ A+ F+Q + D+ + + +L +G I ++++ E F
Sbjct: 489 MSSFGKIRVEGRDALSFMQTVCANDMD-VAAGRIVYTQMLNARGGIECDLTVTRLSETAF 547
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS------------------WNQE 107
L + + + L + S V+I VL N+
Sbjct: 548 FLVVPGATLQRDLAWLRRHVGESFVVITDVSAAETVLPLMGPKSRELLSRASPADFGNEA 607
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
H F + R + L + ++ A +T E
Sbjct: 608 HPFGMAREIEIGMGLARAHRVTYVGELGWELYVGTDQAAHVFETLLEAGGDLGLKLCGLH 667
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D +A + + KG IG++ V R + + + R+
Sbjct: 668 AMDSCRIEKGYRHFGHDITDEDHV-LEAGLGF--AVKTGKGASIGRDAVLRKREKGLSRR 724
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI----DKVDHAI 251
+T + L P+L D +G + G L + +
Sbjct: 725 LVQFRLTDPEPLLFHNEPVLRDGKIVGHVTSGNYGHTLGGAIGLGYVPCRTPGEPAAEML 784
Query: 252 KKGMALTVHG 261
A+ V G
Sbjct: 785 ASSYAIEVAG 794
>gi|170693781|ref|ZP_02884938.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M]
gi|170141199|gb|EDT09370.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M]
Length = 826
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 53/275 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ A LQ+++T DV +P A + +L +G F +++I D ++L ++
Sbjct: 504 VKGRDAQSVLQSLVTNDVD-VPPGTAVYTGMLNERGNYESDFTLTRIAADQYLLVTGTAQ 562
Query: 74 RDSLIDKLLFYKLRSN--VIIEIQPINGVVLS----------------WNQEHTFSN--- 112
D + R V++++ V+ W E
Sbjct: 563 TTRDFDMIERAIPRDKHCVLVDVTSQYAVLAVMGPRSRELLQSVSKADWRNEAFAFGQSR 622
Query: 113 ------SSFIDERFSIADVLLHRTW-------GHNEKIASDIKTY----------HELRI 149
++ R + L + G E + K + LRI
Sbjct: 623 EVDIGYATVRATRLTYVGELGWELYVPVEFAVGVYEALREAGKAFGLVNAGYYAIDSLRI 682
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
G + P T P +A + L K + G++ + +++ +R+R ++++
Sbjct: 683 EKGYRAWGRELTPDT-NPFEAGLAF--ACKLDKDIPFRGRDALLKLRDE-PLRRRMVVLS 738
Query: 209 GTDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240
G IL D +G + L
Sbjct: 739 ADGAADRMLWGGEAILRDGKPVGFVSSAAFGHTLG 773
>gi|313608964|gb|EFR84713.1| glycine cleavage system T protein [Listeria monocytogenes FSL
F2-208]
Length = 369
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 59 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 118
Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100
L ++ + + ++ Y K+ + + +++ I+
Sbjct: 119 LVVNAANTAKDFEWMVKNIQGDVSVTNVSLEYGQLALQGPNAEKILAKLTDVDLSSIS-- 176
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147
+ ++ + I R + + + L
Sbjct: 177 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTL 236
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 237 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 293
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260
+P P+ +D EIG + LA+ ID + + + + +
Sbjct: 294 ELIERGIPRHDYPVFLNDEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 351
Query: 261 GVRVKASF 268
++KA
Sbjct: 352 NKKIKAKI 359
>gi|330950943|gb|EGH51203.1| glycine cleavage system T protein [Pseudomonas syringae Cit 7]
Length = 374
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 49/284 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTHTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIA 242
++ G+ I+ + IGT+ G A+
Sbjct: 294 LLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLTGPLAMGYL 337
>gi|255100785|ref|ZP_05329762.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-63q42]
gi|255306669|ref|ZP_05350840.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile ATCC 43255]
Length = 824
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++
Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117
L I+ D + ++ Y + I + + E + ID
Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170
Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144
R + G + + +
Sbjct: 171 FYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P + + + + K +IG+ ++S+ + RK
Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
+P +G I D +G + + I + + G+A+
Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347
Query: 259 VHGVRVKASFPHWYK 273
V +YK
Sbjct: 348 KKVVPAVIVKKPFYK 362
>gi|126699261|ref|YP_001088158.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile 630]
gi|115250698|emb|CAJ68522.1| Bi-functional glycine dehydrogenase/aminomethyl transferase protein
[Clostridium difficile]
Length = 824
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++
Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117
L I+ D + ++ Y + I + + E + ID
Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170
Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144
R + G + + +
Sbjct: 171 FYKSIPSIIVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P + + + + K +IG+ ++S+ + RK
Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
+P +G I D +G + + I + + G+A+
Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347
Query: 259 VHGVRVKASFPHWYK 273
V +YK
Sbjct: 348 KKVVPAVIVKKPFYK 362
>gi|254975289|ref|ZP_05271761.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-66c26]
gi|255092679|ref|ZP_05322157.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile CIP 107932]
gi|255314416|ref|ZP_05355999.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-76w55]
gi|255517094|ref|ZP_05384770.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-97b34]
gi|255650198|ref|ZP_05397100.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-37x79]
gi|260683322|ref|YP_003214607.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile CD196]
gi|260686918|ref|YP_003218051.1| putative bifunctional glycine dehydrogenase/aminomethyl transferase
protein [Clostridium difficile R20291]
gi|306520184|ref|ZP_07406531.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-32g58]
gi|260209485|emb|CBA63027.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile CD196]
gi|260212934|emb|CBE04200.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile R20291]
Length = 824
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G + F+Q ++T D+ TL + + G ++ LI K E+ ++
Sbjct: 52 SHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117
L I+ D + ++ Y + I + + E + ID
Sbjct: 112 LVINAGNIDKDVAWIIKQSEGYNVDIK-NISSEVSQLAIQGPKAEEILQKITDIDLNSIK 170
Query: 118 -----------------ERFSIADVLLHRTW----------------GHNEKIASDIKTY 144
R + G + + +
Sbjct: 171 FYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + I P + + + + K +IG+ ++S+ + RK
Sbjct: 231 DTLRFEAALPLYGHEI-NEHISPIEGGLSIF--VKTNKESFIGKSILSKEKESGAKRKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
+P +G I D +G + + I + + G+A+
Sbjct: 288 GFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIR 347
Query: 259 VHGVRVKASFPHWYK 273
V +YK
Sbjct: 348 KKVVPAVIVKKPFYK 362
>gi|217964506|ref|YP_002350184.1| glycine cleavage system T protein [Listeria monocytogenes HCC23]
gi|254797876|sp|B8DFY0|GCST_LISMH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|217333776|gb|ACK39570.1| glycine cleavage system T protein [Listeria monocytogenes HCC23]
gi|307570929|emb|CAR84108.1| glycine cleavage system T protein [Listeria monocytogenes L99]
Length = 362
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ ++T D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLF--------------Y-----------KLRSNVI-IEIQPINGV 100
L ++ + + ++ Y K+ + + +++ I+
Sbjct: 112 LVVNAANTAKDFEWMVKNIQGDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSIS-- 169
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHEL 147
+ ++ + I R + + + L
Sbjct: 170 FFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 230 RLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGI 286
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260
+P P+ +D EIG + LA+ ID + + + + +
Sbjct: 287 ELIERGIPRHDYPVFLNDEEIGIVTSGTQSPTLGTNIGLAL--IDTAYTELGQEVEVGIR 344
Query: 261 GVRVKASF 268
++KA
Sbjct: 345 NKKIKAKI 352
>gi|323530050|ref|YP_004232202.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001]
gi|323387052|gb|ADX59142.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001]
Length = 826
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 53/283 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ S + V G+ A LQ ++ DV +P A + +L +G F +++I D +
Sbjct: 496 MTSFSKLLVKGRDAQAVLQGLVANDVE-VPPGTAVYTGMLNERGNYESDFTLTRIAADEY 554
Query: 66 ILE----------------IDRSKRDSLIDKLLFYKL------RSN-----VIIEIQPIN 98
+L I R K L+D Y + RS V
Sbjct: 555 LLVTGTAQTTRDFDMIEKAIPRDKHCMLVDVTSHYAVLAVMGPRSRELLQSVSKADWRNE 614
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-------GHNEKIASDIKTY------- 144
++E ++ R + L + G E + K +
Sbjct: 615 AFAFGQSREVDIGYATVRATRLTYVGELGWELYVPVEFAIGVYETLREAGKAFGLVNAGY 674
Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-I 200
LRI G + P T P +A + + + G+E + ++ R+ +
Sbjct: 675 YAIDSLRIEKGYRAWGRELTPDT-NPFEAGLTFACKLD-RNISFRGRE--ALLKRRDEPL 730
Query: 201 RKRPMIITGTDDLPP---SGSPILTDDIEIGTLGVVVGKKALA 240
R+R +++T G IL D +G + L
Sbjct: 731 RRRMVVLTADGAARHMLWGGEAILRDGKPVGFVSSAAFGHTLG 773
>gi|171914498|ref|ZP_02929968.1| glycine cleavage system protein T [Verrucomicrobium spinosum DSM
4136]
Length = 371
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 88/310 (28%), Gaps = 62/310 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A FL +T +V L + + +L QG ++ ++ ++ + +
Sbjct: 54 SHMGQFLIEGAGAENFLNRALTNNVSKLGIGDGQYTLMLNDQGGVIDDLIVYRLSDREYF 113
Query: 67 LEIDRSKRDSLIDKLL-------------------------FYK-LRS------------ 88
L ++ S L + + +
Sbjct: 114 LVVNASMIAEDEAHLRSLGFGEGVSFANISSATGGLAVQGPKSREVFAAVFGPGAAFPEH 173
Query: 89 -NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDIKTYH 145
++ + + L F +I + + + +
Sbjct: 174 NKILFSLTGEGVLYLCGTGYTGEEGFEFFAPAATIEGWFDKIVQACRDAGGGPAGLGARD 233
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204
LR+ G D P P A + + L K ++G+ V+ + + I K
Sbjct: 234 TLRLEMGYPLNGNDLSPDKT-PLQAGLGFF--VDLAKEDFVGKSVLDSQKTQGIPTKLTG 290
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
+T P S P++ + +G +A + A+T
Sbjct: 291 FRMTAPSPPPRSHYPVVHEGQVVGETCSAGLSPSLNQGIGMAYLPV-----------AIT 339
Query: 259 VHGVRVKASF 268
G+ ++
Sbjct: 340 KPGIPIEIEI 349
>gi|117924857|ref|YP_865474.1| aminomethyltransferase [Magnetococcus sp. MC-1]
gi|117608613|gb|ABK44068.1| aminomethyltransferase [Magnetococcus sp. MC-1]
Length = 371
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 94/282 (33%), Gaps = 47/282 (16%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ ++V G A +LQ ++ DV L A + +L G ++ ++ + +E +
Sbjct: 57 HMGHVQVSGPQATAYLQFLLCNDVAKLREAGQAIYTGMLNSSGGVIDDLIVYRDDEQHYH 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEH-------------- 108
+ ++ + R+ + + R+ V + + P G++ E
Sbjct: 117 VVVNAANREGDVQWMQD---RAQDFEGVTVTLDPQLGMIAVQGPEAQQRVAELFAGVELE 173
Query: 109 ---TFSNSSFIDERFSIAD----------------VLLHRTWGHNEKIASDIKTYHELRI 149
TF + R + + L + + LR+
Sbjct: 174 ALKTFRSIIIEGGRIARTGYTGEDGFELIFPAQTIITLWTRLQAMQVPPIGLGARDTLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMIIT 208
G+ +D I P M T ++G++ + ++ ++R +I
Sbjct: 234 EAGLNLYGSDM-DHKIDPLACGMGWTVAWEPTTRMFLGRDYLELLRESGGSSQQRVGLIL 292
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDK 246
+ +G P+L G + + +A+AR+D
Sbjct: 293 TDKGVLRAGQPVLFHGRPSGHVTSGTWSPTLEQGIAMARVDA 334
>gi|302035703|ref|YP_003796025.1| glycine cleavage system aminomethyltransferase [Candidatus
Nitrospira defluvii]
gi|300603767|emb|CBK40099.1| Aminomethyltransferase, glycine cleavage system T protein
[Candidatus Nitrospira defluvii]
Length = 369
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/323 (15%), Positives = 97/323 (30%), Gaps = 64/323 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G ++ FLQ + T DV TL + + S I G I + ++ F+
Sbjct: 49 SHMGRIRVSGPGSLAFLQRVTTNDVSTLSVQQSHYSMICAQNGGIKDDIFVYHVKPYEFL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI----------------IEIQ--------------P 96
+ ++ S R+ ++ L V I IQ
Sbjct: 109 VCVNASNREKIVTWL-----HEKVEQAQGCKVQDQSASLAQIAIQGPASRDILAAAGIAD 163
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------AS 139
++ + + + T + S + R L + + E+ +
Sbjct: 164 LSTLKIRHCLDATLGDDSLLVTRTGYTGELGYELYLPAERAPKVWEQLLEAGRPLSIKPA 223
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ LR+ + D P +A + + + KG +IG+ + Q +
Sbjct: 224 GLGARDLLRLEMAYLLYGNDM-NEETTPIEAGAEWV--VKFDKGDFIGRTELLAQQAQGT 280
Query: 200 IRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVV------VGKKALAIARIDKVDHA 250
R+ +P G IL+ EIG + +
Sbjct: 281 ARRLVAFELVEKAVPRHGFKILSAQTPHTEIGEVTSGNLSPLLQKGIGMGYVPPATARPG 340
Query: 251 IKKGMALTVHGVRVKASFPHWYK 273
+ + P +YK
Sbjct: 341 SSILIDIRGRACPAVVVKPPFYK 363
>gi|284801733|ref|YP_003413598.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5578]
gi|284994875|ref|YP_003416643.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5923]
gi|284057295|gb|ADB68236.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5578]
gi|284060342|gb|ADB71281.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5923]
Length = 384
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 74 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 133
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 134 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 192
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 193 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 252
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 253 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 309
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + + +
Sbjct: 310 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEIGIRN 367
Query: 262 VRVKASF 268
+VKA
Sbjct: 368 KKVKAKI 374
>gi|219847204|ref|YP_002461637.1| glycine cleavage system T protein [Chloroflexus aggregans DSM 9485]
gi|219541463|gb|ACL23201.1| glycine cleavage system T protein [Chloroflexus aggregans DSM 9485]
Length = 367
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/317 (18%), Positives = 104/317 (32%), Gaps = 54/317 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A FLQ ++T DV T+P A + P G I+ + + D F+
Sbjct: 50 SHMGRFMIRGPQAEAFLQRMVTCDVSTIPLGHAGYGLLCRPDGGIVDDIFLYHLP-DEFM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID--- 117
+ ++ + R D L + V IE + +L+ NS+ D
Sbjct: 109 MVVNAANRAKDWDWLQQHTTGFEVEIEDRSERWAMLALQGPQAEHLLAGAENSTTADIGS 168
Query: 118 -ERFSIA-------DVLLHRT--------------------------WGHNEKIASDIKT 143
+A + L+ RT G N A +
Sbjct: 169 LPFHGVAMTTIFGHNALIARTGYTGEDGFEIFFEAQHAERFWYGLLALGGNAVQACGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR + + TI P++A + + + L KG +IG+E + I+ I R+
Sbjct: 229 RDSLRFEACLALYGHEI-DETINPYEARLGWV--VKLNKGDFIGREALQAIKAAGISRRL 285
Query: 204 PMIITGTDDLPPSGSPI-LTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMA 256
+ SG + +G + + +A D + +
Sbjct: 286 VGFEMVEKGIARSGYSVQRVSGETVGFVTSGMPSPTLGRPFGMAYVPTDLSSEGSEFNVV 345
Query: 257 LTVHGVRVKASFPHWYK 273
+ VR + +YK
Sbjct: 346 IRERPVRARVVKMPFYK 362
>gi|27468140|ref|NP_764777.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis ATCC 12228]
gi|57867047|ref|YP_188678.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis RP62A]
gi|251810953|ref|ZP_04825426.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876037|ref|ZP_06284904.1| aminomethyltransferase [Staphylococcus epidermidis SK135]
gi|293366502|ref|ZP_06613179.1| aminomethyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
gi|31340123|sp|Q8CSF4|GCST_STAES RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|61213208|sp|Q5HP12|GCST_STAEQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|27315686|gb|AAO04821.1|AE016748_55 aminomethyltransferase [Staphylococcus epidermidis ATCC 12228]
gi|57637705|gb|AAW54493.1| glycine cleavage system T protein [Staphylococcus epidermidis
RP62A]
gi|251805463|gb|EES58120.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295062|gb|EFA87589.1| aminomethyltransferase [Staphylococcus epidermidis SK135]
gi|291319271|gb|EFE59640.1| aminomethyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329725328|gb|EGG61811.1| aminomethyltransferase [Staphylococcus epidermidis VCU144]
gi|329735347|gb|EGG71639.1| aminomethyltransferase [Staphylococcus epidermidis VCU045]
gi|329737286|gb|EGG73540.1| aminomethyltransferase [Staphylococcus epidermidis VCU028]
Length = 363
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+Q I++ D L A SA+ +G I+ + K+ E+ ++
Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + + SN +++ G + + +D S
Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPHSRALINELVDIDVSHM 170
Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146
+ + + +
Sbjct: 171 AMFEFKQNVQIFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLEYDVTPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ + +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIENHFIGKSVLKAQKENGSER 283
Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G +L ++ EIG + K++A+A ID+ + K +
Sbjct: 284 RTVGLELLGKGIARTGYDVLDENSNEIGFVTSGTQSPSSGKSIALAIIDRDAFEMGKKVI 343
Query: 257 LTVHGVRVKASF 268
+ + +V+A
Sbjct: 344 VQIRKRQVEAKI 355
>gi|302869050|ref|YP_003837687.1| glycine cleavage system T protein [Micromonospora aurantiaca ATCC
27029]
gi|302571909|gb|ADL48111.1| glycine cleavage system T protein [Micromonospora aurantiaca ATCC
27029]
Length = 395
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 86/309 (27%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ I+V G A F+ A +T D+ + A+ + G ++ + +D
Sbjct: 84 SHLGKIRVTGPGAADFVNACLTNDLGRITPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 143
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------ 107
L + + + +L V + + VL+
Sbjct: 144 FLVPNAANAAEVARRLRA-AAPEGVTVTDEHEAYAVLAVQGPRSAELLGVLGLPTGHDYM 202
Query: 108 ----HTFSNSSFIDERFSIADVLLHRT----------WGHNEKIASD-----IKTYHELR 148
T R L + W A D + LR
Sbjct: 203 SFSTATLDGVELTVCRTGYTGELGYELVVASEHAVAVWDALFAAADDVRACGLAARDTLR 262
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G D P I P + K + G++ + + R +
Sbjct: 263 TEMGYPLHGQDLSPE-ITPVQGRSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGLTA 319
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID-KVDHAIKKGMALTVHG 261
+P G + D ++GT+ ALA+ D K+ + + +
Sbjct: 320 VDRAIPRPGMAVYAGDRQVGTVTSGTFSPTLKHGVALALVDTDPKLADGDELEVDIRGRR 379
Query: 262 VRVKASFPH 270
R++ + P
Sbjct: 380 ARMRLTRPP 388
>gi|218681325|ref|ZP_03529222.1| FAD dependent oxidoreductase [Rhizobium etli CIAT 894]
Length = 456
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 95/314 (30%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + + +P + +L +G I +++ E F
Sbjct: 131 MTSFGKIRVEGRDACRFLQRLCANQID-VPAGRIVYTQMLNRRGGIESDLTATRLTETAF 189
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
+L + + + L + NV++ VL N
Sbjct: 190 LLIVPGATLQRDLAWLRRHVTDENVVVTDMTAAESVLCVMGPTSRQLMQRISPDDFSNDA 249
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
H F + R + L + ++ A +
Sbjct: 250 HPFGTAREIEIGMGLARAHRVTYVGELGWELYVSTDQTAHVFEALELAGLDLGLKLCGIH 309
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI D +A + + KG +IG++ V R Q + R+
Sbjct: 310 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTGKGEFIGRDAVLRKQETGVDRR 366
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIKK 253
+T + L I+ D +GT+ G L + + +
Sbjct: 367 LVQFKLTEPEPLLFHNEAIIRDGEIVGTITSGNYGHFLGGAIGLGYVPCKGESAAEVLGS 426
Query: 254 GMALTVHGVRVKAS 267
+ + G RV+A
Sbjct: 427 CYEIEIAGTRVRAE 440
>gi|297584576|ref|YP_003700356.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10]
gi|297143033|gb|ADH99790.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10]
Length = 364
Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 101/318 (31%), Gaps = 56/318 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G + FLQ ++T DV + + +A+ G + + K +++ +
Sbjct: 50 SHMGEIEVTGPETLEFLQYVMTNDVKKVKDGRCQYTAVCYETGGTVDDLVWYKRSDESAL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-------------VIIEIQPING-------------- 99
L ++ + + LL + S I +Q
Sbjct: 110 LVVNAANEAKDFEWLLKH---SKDFNVQVSNVSSHYAQIALQGPLANQIAQRLSETDLKE 166
Query: 100 -VVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIAS-DI 141
S+ + TF+N+S + R + G E I +
Sbjct: 167 IRFFSFKEGVTFANASVLISRTGYTGEDGFEIYCNPNDASHIWKTCLSEGEEEGIQPCGL 226
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR + + + P +A + + +IG++V++R + +R
Sbjct: 227 GARDTLRFEATLPLYGQELSSNIS-PVEAGIGFAVKTDVDSR-FIGKDVLARQKEDGPLR 284
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGM 255
K I +P G + ++IG + LA+ + +
Sbjct: 285 KSVGIEMIDKGIPRHGYAVSHQGMDIGEVTSGTQSPTLGKNIGLALIDQKYASEGTEVEV 344
Query: 256 ALTVHGVRVKASFPHWYK 273
+ VR K +YK
Sbjct: 345 QIRKKTVRAKVVQTPFYK 362
>gi|218248559|ref|YP_002373930.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
PCC 8801]
gi|257061625|ref|YP_003139513.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
PCC 8802]
gi|254797870|sp|B7K468|GCST_CYAP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218169037|gb|ACK67774.1| glycine cleavage system T protein [Cyanothece sp. PCC 8801]
gi|256591791|gb|ACV02678.1| glycine cleavage system T protein [Cyanothece sp. PCC 8802]
Length = 369
Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/308 (14%), Positives = 107/308 (34%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ + G + LQ ++ +D+ L A+ + +L PQG I+ ++ +
Sbjct: 52 SHMGKFALQGTELLKSLQFLVPSDLERLQPGQAQYTVLLNPQGGIIDDIIVYYQGITETG 111
Query: 62 EDTFILEIDRSKRDS----LIDKLLFYKLR------SNVIIEIQPINGVV---------- 101
E + ++ + L+ L K+ V+I +Q V
Sbjct: 112 EQRANIIVNAGTTEKDKTWLLSHLDTQKITFKDLSGEKVLIAVQGPQSVAKLQAFVQEDL 171
Query: 102 -----LSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTY 144
+ + +FI L R+ +
Sbjct: 172 SQVGFFGHFEGTVLTKPAFIARTGYTGEDGFEVMVDPEVGQDLWRSLFQAGVTPCGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + + D +T P +A ++ L + +KG +IG++++ + + + + R+
Sbjct: 232 DTLRLEAAMCLYSQDIDDNTT-PLEAGLNWLVHLD-SKGDFIGRDILEKQKAQGVERRLV 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+ + G P+L + +G + KA+A+A + + + + + +
Sbjct: 290 GLQMEGRHIARHGYPVLYEGKIVGEVTSGTLPPTVGKAIALAYVPRSLGKVGTPLEVEIR 349
Query: 261 GVRVKASF 268
G +A
Sbjct: 350 GQNCQAIV 357
>gi|303237228|ref|ZP_07323798.1| aminomethyltransferase [Prevotella disiens FB035-09AN]
gi|302482615|gb|EFL45640.1| aminomethyltransferase [Prevotella disiens FB035-09AN]
Length = 361
Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 81/271 (29%), Gaps = 56/271 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A F+ I T DV L G ++ I K+ E+ FI
Sbjct: 51 SHMGEIIVSGNEAEKFVNYIFTNDVTGLGVGKVIYGMFCMETGGVVDDTCICKVGENEFI 110
Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTF---------- 110
L ++ + D + + KL + G + E
Sbjct: 111 LTVNAANIQKDFDWISQHTAGFDIKL-----VNDSEKYGQLAIQGPEAEKIITEKLGIAC 165
Query: 111 -------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
I R +G + I +K + +
Sbjct: 166 SDLKFYEVKTMNHDGEEIIISRTGYTGEDGFELYGAPDYI---VKAWDKLMEAGATPCGL 222
Query: 147 -----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR G+ + I P A + + + K ++G+E + + + + +
Sbjct: 223 GCRDTLRFEAGMPLYGHEL-SEEITPVMAGLSMF--VKFDKENFLGKEALLKQKTEGVTK 279
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ I + +P +G + D EIG +
Sbjct: 280 RLRGIWLDDNAIPRNGYKVFKDGKEIGVITT 310
>gi|330899514|gb|EGH30933.1| glycine cleavage system T protein [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 374
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 43/268 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKNQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVTLLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E + Q + +KR
Sbjct: 234 EAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGV 232
++ G+ I+ + IGT+
Sbjct: 294 LLPQERTPVREGTEIVDEQGTVIGTVCS 321
>gi|297587560|ref|ZP_06946204.1| aminomethyltransferase [Finegoldia magna ATCC 53516]
gi|297574249|gb|EFH92969.1| aminomethyltransferase [Finegoldia magna ATCC 53516]
Length = 366
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 97/311 (31%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ F+ + T D + S +L G ++ L+ K ++ F+
Sbjct: 53 SHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVDDLLVYKNNDEDFL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
+ + + + + Y +E++ I+ V + +
Sbjct: 113 MVPNAANTEKDFKHISKYV--DKFDVELKNISDSVAEIAIQGPKAEELLQRLVEFDLSKI 170
Query: 117 -------DERFSIADVLLHRT----------WGHNEKIASDIKTY--------------- 144
D ++ DVL+ RT + E I D+
Sbjct: 171 EYYHFVKDIKYKEYDVLISRTGYTGEDGFEVYATAEAIV-DLWNELLEKGKDLGVKPCGL 229
Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR + + + P + + + + K ++G+ I +
Sbjct: 230 GCRDTLRFEAAMPLYGNELA-DEVSPLEVGLKF--AVKMDKDDFVGKAKTQEKVDAGIDK 286
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
K I + + G+ + D IG + LA A +DK A+ + +
Sbjct: 287 KLIGIEMQSKRIARQGAEVQKDGKTIGKVTTGYLSPTFGVCLANAFVDKSAVALGDEVDV 346
Query: 258 TVHGVRVKASF 268
+ KA+
Sbjct: 347 IIRNKPAKATV 357
>gi|224499928|ref|ZP_03668277.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes Finland 1988]
Length = 362
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 101/307 (32%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEAEIGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|307318723|ref|ZP_07598156.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
gi|306895750|gb|EFN26503.1| folate-binding protein YgfZ [Sinorhizobium meliloti AK83]
Length = 825
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 51/282 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + V G+ A L I ADV + + + +L +G + ++ D F+
Sbjct: 488 TSFAKLLVQGRDAAKTLNRICAADVD-VGIGRSVYTGMLNERGGYESDLTVMRLAADRFL 546
Query: 67 LEIDRSKRDSLIDKLLF----------------YKLRS-----------NVIIEIQPING 99
+ ++ D + Y + + + G
Sbjct: 547 IVTGSAQAVHDTDWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARDILGRITSADLSNAG 606
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145
+ +E ++ R + L +E + H
Sbjct: 607 FPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGLVDCGYY 666
Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201
LRI G + + P I PH+A + +S K G +IG+E + R +
Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPHEAGLAF--AVSFDKPGGFIGREALMRAKQAGAPV 723
Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAI 241
+R + T D P G IL D +G + L +
Sbjct: 724 RRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGL 765
>gi|94969488|ref|YP_591536.1| glycine cleavage system aminomethyltransferase T [Candidatus
Koribacter versatilis Ellin345]
gi|254797862|sp|Q1INT8|GCST_ACIBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|94551538|gb|ABF41462.1| glycine cleavage system T protein [Candidatus Koribacter versatilis
Ellin345]
Length = 380
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 106/313 (33%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A+ +Q + D L A+ SA+L P G + ++ K +D ++
Sbjct: 60 SHMGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYL 119
Query: 67 LEIDRSKRDSLIDKLL----FYKLR------------------------------SNVII 92
L I+ R+ ++ + +K+ S V
Sbjct: 120 LVINAGTREKDVNWVKDNTRQFKVTVEDLSDQFTQIAIQGPKGVDTLQKLTDVDLSKVKF 179
Query: 93 ------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK----IASDIK 142
+ + V+++ + + K + + +
Sbjct: 180 YWFTRGTVAGLKNVLIARTGYTAEDGFEIYIPSDAATSDRVWNELLQAGKEFGVVPAGLG 239
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ + LR+ + + +A +D + + KG +IG+ + + ++ + R
Sbjct: 240 SRNTLRLEGKLPLYGHEISDEINVW-EAGLDRF--LKMDKGDFIGRAALEKAKNDGVKRA 296
Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
+ T +P G +L + EIG + ALA +++ A+ +
Sbjct: 297 LVGLETIERGIPRDGYKVLDLEGKEIGYVTSGSYMPFLKRNLALAYVPVEQ--SALDNIV 354
Query: 256 ALTVHGVRVKASF 268
A+ + VKA
Sbjct: 355 AVEIRNQPVKAKV 367
>gi|260590760|ref|ZP_05856218.1| glycine cleavage system T protein [Prevotella veroralis F0319]
gi|260537246|gb|EEX19863.1| glycine cleavage system T protein [Prevotella veroralis F0319]
Length = 361
Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 86/263 (32%), Gaps = 40/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ I T DV LP + P G ++ I K+E+ F+
Sbjct: 51 SHMGEVLVTGSEAEKYINHIFTNDVKGLPAGKVLYGMMCYPDGGVVDDTCICKLEDQVFL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111
+ I+ S D I + +V+I+ + N L+ +
Sbjct: 111 MTINASNIDKDIAWIEKNAAGFDVVIKNKSENYGQLALQGPEAEAKIESVLGISTKELNF 170
Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149
I R +G + I LR
Sbjct: 171 YEVRQVKTDGEVIIVSRTGYTGEDGFEIYGSPKYINEAWDKLIAAGITPCGLGCRDTLRF 230
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + I P A + + + L K +IG++ + + + + ++ I+
Sbjct: 231 EVGLPLYGNEL-SDKISPVMAGLSMF--VKLDKEEFIGKDALQKQKAEGVSQRLRGIVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232
+ +P G ++ D E+G +
Sbjct: 288 GNAIPRHGYKVMKDGKEVGVVTT 310
>gi|242373840|ref|ZP_04819414.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis M23864:W1]
gi|242348394|gb|EES39996.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis M23864:W1]
Length = 363
Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 55/310 (17%), Positives = 113/310 (36%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ +D F+
Sbjct: 53 SHMGEIEISGNEAFQFVQYILSNDANNLTDNKAMYTALCNEEGGIIDDLVTYKLADDRFL 112
Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLRS----NVIIEIQPING 99
L ++ + D + + Y K R NV I++ +
Sbjct: 113 LIVNAANTDKDFNWISKQSENFDVKVNNTSDEYGQLAIQGPKARDLVNENVDIDVSDMKM 172
Query: 100 V-----VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
V + ++ S S + E S V + + + + LR
Sbjct: 173 FEFKQNVDLFGKKVILSQSGYTGEDGFEIYCKSEDTVDIWNQLLKHNVVPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + ++
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEDNFIGKSVLKDQKENGSTKRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G +L + +IG + K++A+A ID+ + K + +
Sbjct: 286 VGLELLDKGIARTGYEVLNLEGNQIGVVTSGTQSPSSDKSIALAIIDRDAFEMGKEVLVQ 345
Query: 259 VHGVRVKASF 268
V +VKA
Sbjct: 346 VRKRQVKAKI 355
>gi|73662527|ref|YP_301308.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|123642669|sp|Q49XY1|GCST_STAS1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|72495042|dbj|BAE18363.1| putative glycine cleavage system T protein [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 363
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 96/295 (32%), Gaps = 51/295 (17%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M +S+ I + G A +Q +++ D + A+ +A+ QG I+ + K+
Sbjct: 47 MGLFDVSHMGEIIIKGSDASNLVQYLLSNDTDNVTTHKAQYTALCNEQGGIIDDLITYKL 106
Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---KLRSNVIIEIQPINGVVLSWNQEH--------- 108
EE+ ++L ++ + + Y K +I + G + +
Sbjct: 107 EENVYLLVVNAGNTEKDFEW--MYEKAKAFDAEVINVSTEYGQLAIQGPKARDLVQQYVN 164
Query: 109 ----------------------TFSNSSFIDER----FSIADVL--LHRTWGHNEKIASD 140
S S + E + AD L N+
Sbjct: 165 IDVSEMKPFEFEQNVEFFGKNVILSQSGYTGEDGFEIYCNADDAPYLWDEILKNDVTPCG 224
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ G+ D TI P++A + L + +IG+ V+ +
Sbjct: 225 LGARDTLRLEAGLPLHGQDL-SETITPYEAGI-AFAAKPLIEADFIGKSVLKDQKENGSK 282
Query: 201 RKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVD 248
R+ + +P +G + D +IG + LA+ D +
Sbjct: 283 RRTVGLEMIDKGIPRTGYEVYDLDGNQIGEITSGTQSPLTGKSIGLALINRDAFE 337
>gi|254829895|ref|ZP_05234550.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 10403S]
Length = 362
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEIGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|209550887|ref|YP_002282804.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536643|gb|ACI56578.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 817
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 95/314 (30%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + + +P + +L +G I +++ E F
Sbjct: 492 MTSFGKIRVEGRDACRFLQRLCANQID-VPAGRIVYTQMLNHRGGIESDLTATRLTETAF 550
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
+L + + + L + NV++ VL N
Sbjct: 551 LLIVPGATLQRDLAWLRRHVADENVVVTDMTAAESVLCVMGPESRQLMQRVSPDDFSNDA 610
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
H F+ + R + L + ++ A +
Sbjct: 611 HPFATAREIEIGMGLARAHRVTYVGELGWELYISTDQAAHVFEALELAGLDLGLKLCGIH 670
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D +A + + +G +IG++ V Q + R+
Sbjct: 671 TLDSCRIEKGFRHFGHDITDEDHV-LEAGLGF--AVKTGQGEFIGRDAVLHKQETGVDRR 727
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIKK 253
+T + L I+ D +GT+ G L + +
Sbjct: 728 LVQFKLTDPEPLLFHNEVIVRDGEIVGTITSGNYGHFLGGAIGLGYVPCEGESAAEVLGS 787
Query: 254 GMALTVHGVRVKAS 267
+ + G RV+A
Sbjct: 788 FYEIEIAGTRVRAE 801
>gi|47095931|ref|ZP_00233534.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254898487|ref|ZP_05258411.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes J0161]
gi|254912022|ref|ZP_05262034.1| glycine cleavage system T protein [Listeria monocytogenes J2818]
gi|254936349|ref|ZP_05268046.1| glycine cleavage system T protein [Listeria monocytogenes F6900]
gi|47015677|gb|EAL06607.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258608940|gb|EEW21548.1| glycine cleavage system T protein [Listeria monocytogenes F6900]
gi|293589988|gb|EFF98322.1| glycine cleavage system T protein [Listeria monocytogenes J2818]
Length = 362
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSEMEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|108805964|ref|YP_645901.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
gi|122381242|sp|Q1AR89|GCST_RUBXD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|108767207|gb|ABG06089.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
Length = 372
Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 92/302 (30%), Gaps = 45/302 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A LQ ++T DV L A +A+ G + + + E F+
Sbjct: 57 SHMGEVAFRGPDAERALQRLLTRDVSRLGEGQAGYAAVCLESGGTVDDVIAYRRGE-GFL 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFSN 112
+ ++ + R+ + + +V I + +L+
Sbjct: 116 VVVNAANREKDLAHFRRHTADLDVEISDETEEWALLALQGPEAERLLQPFVAGDLSALGR 175
Query: 113 SSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY----------------HELRI 149
F++ + ++ RT E + A + LR+
Sbjct: 176 YRFLETHVDGGEAIVARTGYTGEDGFEVFLRPAEAPSLWRRLVEAGAAPAGLGARDTLRL 235
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + P +A + + L K ++GQ + R + R +RK+ +
Sbjct: 236 EAGMCLYGNEL-DEETTPLEAGISF--AVHLHKEEEFVGQRALQRQRERG-LRKKLVGFE 291
Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKA 266
+ G P+ G + L + V + G + + V A
Sbjct: 292 LEGRGIARHGYPVAVGGERAGVVTSGTMSPTLGRAIGLAYVPPETEGGFEVLIRERPVPA 351
Query: 267 SF 268
Sbjct: 352 RI 353
>gi|315282209|ref|ZP_07870666.1| glycine cleavage system T protein [Listeria marthii FSL S4-120]
gi|313614144|gb|EFR87831.1| glycine cleavage system T protein [Listeria marthii FSL S4-120]
Length = 362
Score = 72.2 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKVGKAQYNIMCYETGGTVDDLVVYKKAETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L ++ + + + ++ +R +V + + G + S D S
Sbjct: 112 LVVNAANTEKDFEWMVK-NVRGDVTVTNVSSEFGQLALQGPNAEKILSKLTDVDLSAISF 170
Query: 123 ------ADVLLHRTWGHNEKIASD----------------------------IKTYHELR 148
ADV +T + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIDQKEAGLARKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ EIG + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEQEIGVVTSGTQSPTLGTNIGLAL--IDTAYTELDQELEVGIRN 345
Query: 262 VRVKASF 268
++KA
Sbjct: 346 KKIKAKV 352
>gi|310657740|ref|YP_003935461.1| aminomethyltransferase [Clostridium sticklandii DSM 519]
gi|308824518|emb|CBH20556.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Clostridium
sticklandii]
Length = 365
Score = 72.2 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/312 (17%), Positives = 105/312 (33%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V GK A F Q I T D+ L S + G ++ L+ K +D F+
Sbjct: 53 SHMGEIEVKGKDAEEFCQKICTNDISKLEDNQILYSFMCYENGTVVDDILVYKFSQDDFM 112
Query: 67 LEIDRS-----------------------------------KRDSLIDKLL--------- 82
L ++ K ++++ K
Sbjct: 113 LVVNAGNISKDYEWIVNHTTGYEVNINNISDNIGQVAVQGPKAEAILQKFTDTDLSEIKF 172
Query: 83 FYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140
FY LR ++I+ IN +V + E F + + ++L + + +
Sbjct: 173 FYALR---NVDIKGINTIVSRTGYTGEDGFEIYCEAKDSVKLWKLILDESP-EEDILPIG 228
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR + + I P +A + L K +IG+E + + +
Sbjct: 229 LGARDTLRFEANLPLYGNEL-SDEITPIEAGYGYF--VKLDKDDFIGKEALKAQKSEGLK 285
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
RK + G + ++ +IG + K++ +A ID A+ +
Sbjct: 286 RKIVGFELLDKRISRHGYEVYLENDKIGIVTTGYQSPTLQKSIGLALIDAQYVALGNEIY 345
Query: 257 LTVHGVRVKASF 268
+ + +V A
Sbjct: 346 IDIRNKKVPAKI 357
>gi|16803388|ref|NP_464873.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes EGD-e]
gi|224501709|ref|ZP_03670016.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL R2-561]
gi|254827609|ref|ZP_05232296.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL N3-165]
gi|24636859|sp|Q8Y7D5|GCST_LISMO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|16410764|emb|CAC99426.1| lmo1348 [Listeria monocytogenes EGD-e]
gi|258599987|gb|EEW13312.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL N3-165]
Length = 362
Score = 71.8 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 112 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 170
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKI 352
>gi|212224645|ref|YP_002307881.1| glycine cleavage system aminomethyltransferase T [Thermococcus
onnurineus NA1]
gi|229807555|sp|B6YY21|GCST_THEON RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|212009602|gb|ACJ16984.1| glycine cleavage system protein T [Thermococcus onnurineus NA1]
Length = 398
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 80/333 (24%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D +
Sbjct: 59 GKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFE 118
Query: 76 SL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLSW 104
L I + + + K R + + +I IN +
Sbjct: 119 KLEAWFNAIKRGIEKFGELDLEIENKTYDMAMFSIQGPKARDLAKDLFDI-DINDLWWFQ 177
Query: 105 NQEHTFSNSSFIDERFSIADVLL-----------HRTWGHNEKIASDIKTY--------- 144
+E + R H + + +
Sbjct: 178 AKEVELDGIKMLLSRSGYTGENGFEVYFEDANPYHPDPERRGEPEKALHVWKTILEAGEK 237
Query: 145 -----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCY 185
LR+ G + + P A +D I K +
Sbjct: 238 YGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE-F 294
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKAL 239
IG+E + + + R I RK +P G + + IG + +
Sbjct: 295 IGKEALLKQRERGIPRKLVHFKMIDKGIPREGYKVYANGELIGEVTSGTSSPLLGIGIGI 354
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A + + ++ + + + P +Y
Sbjct: 355 AFVKTEYAKPGVEIEVEIRGKPKKAVTVAPPFY 387
>gi|255030068|ref|ZP_05302019.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes LO28]
Length = 342
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 32 SHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 91
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVL----------------------- 102
L ++ + D + ++ +R +V + + G +
Sbjct: 92 LVVNAANTDKDFEWMVK-NIRGDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISF 150
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 151 FGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGARDTLR 210
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 211 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLNRKLVGIE 267
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ ++ +IG + LA+ ID + + + + +
Sbjct: 268 LIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLAL--IDTAYTELGQEVEVGIRN 325
Query: 262 VRVKASF 268
+VKA
Sbjct: 326 KKVKAKI 332
>gi|156742257|ref|YP_001432386.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM
13941]
gi|156233585|gb|ABU58368.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM
13941]
Length = 370
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 93/272 (34%), Gaps = 54/272 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A+PFLQ ++T DV + A + + P G I+ I + D ++
Sbjct: 55 SHMGEVEVRGPDALPFLQHLVTYDVAAIQPGEANYALMCLPNGGIIDDTFIYNLG-DYYL 113
Query: 67 LEIDRS-----------------------------------KRDSLIDK--------LLF 83
+ ++ + + L+ + L F
Sbjct: 114 IVVNAANTAKDVAWMHECAKGFQVMVADASDRTGMLALQGPAAEGLLAQVAGADLAALPF 173
Query: 84 YKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
+ +R + I +V + E F D+ + D LL+ + +
Sbjct: 174 HGVRR---GTVSGIPAIVARTGYTGEDGFELFVAADDVGRLWDALLN-AGRNAGLKPCGL 229
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR + + P++A + + + L KG +IG++ + RI+ + R
Sbjct: 230 GARDSLRFEACLALYGHEIT-EETNPYEARLGWV--VKLDKGDFIGRDALQRIKQEGVRR 286
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232
+ + S I + + +G +
Sbjct: 287 RLTGFEMVGRGIARSEYEIRDLEGMPVGRVTS 318
>gi|15606994|ref|NP_214376.1| hypothetical protein aq_2004 [Aquifex aeolicus VF5]
gi|2984247|gb|AAC07775.1| hypothetical protein aq_2004 [Aquifex aeolicus VF5]
Length = 153
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 8/134 (5%)
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ + ++ + E RI + + + + P +A + L ISL KGCY+GQE ++R
Sbjct: 17 PQDKEASVEDFEEERIKNCVPRIHKELREG-FSPLEAGV-LPYAISLNKGCYVGQEAIAR 74
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV--VGKKALAIA---RIDKVD 248
+ R + + + IL + IG + V GK AL + +K
Sbjct: 75 VYFRGRTPRVLTKFEVIEQVKEE-EKILEGNKAIGLITSVSPSGKMALGYILRAKFEKGK 133
Query: 249 HAIKKGMALTVHGV 262
+ + GV
Sbjct: 134 EYQTESGKVKAKGV 147
>gi|319400876|gb|EFV89095.1| glycine cleavage system T protein [Staphylococcus epidermidis
FRI909]
Length = 363
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 106/312 (33%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+Q I++ D L A SA+ +G ++ + K+ E+ ++
Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNEEGGVIDDLVTYKLNENHYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + + SN +++ G + + +D S
Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPRSRALINELVDVDVSHM 170
Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146
+ + + +
Sbjct: 171 AMFEFKQNVQLFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLKYDVTPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIANDFIGKSVLKAQKENGSER 283
Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G +L ++ +IG + K++A+A ID+ + K +
Sbjct: 284 RTVGLELLGKGIARTGYEVLDENSNQIGFVTSGTQSPSSGKSIALAIIDRGAFEMGKKVI 343
Query: 257 LTVHGVRVKASF 268
+ + +V+A
Sbjct: 344 VQIRKRQVEAKI 355
>gi|261879403|ref|ZP_06005830.1| glycine cleavage system T protein [Prevotella bergensis DSM 17361]
gi|270333971|gb|EFA44757.1| glycine cleavage system T protein [Prevotella bergensis DSM 17361]
Length = 361
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 53/304 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A ++ I T DV P +L P G + L+ K+ + F
Sbjct: 50 SHMGEVFVRGKDAERYINHIFTNDVTGAPIHQIYYGMMLYPDGGTVDDLLVYKMGDQEFF 109
Query: 67 LEIDRSKRDSLIDKL---------------LFYKLRS-------NVIIEIQPIN--GVVL 102
+ I+ + D ++ + Y + V+ E+ + +
Sbjct: 110 VVINAANIDKDVEWMMSNKEGFDVEIDHASERYGQLAVQGPESEKVLAEVLGWDCSDLKF 169
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
+ I R +G ++ I ++ + +
Sbjct: 170 YTAKTIDTGQEEIIISRTGYTGEDGFEIYGSHDFI---VEQWDKLMASGQCVPCGLGCRD 226
Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR G+ + I P A + + K +IG+E V++ + +
Sbjct: 227 TLRFEVGLPLYGDEL-SDKISPVMAGLSMFC--KFDKPEFIGKEAVAKQKEEGPAMRLRG 283
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG-VRV 264
I +P G +L D E+G + + +DK +L + V V
Sbjct: 284 IEMEDRAVPRHGYKVLKDGKEVGEVTT-----GYRLISVDKSCAVALVDASLKLGDKVEV 338
Query: 265 KASF 268
+
Sbjct: 339 QIRK 342
>gi|312144692|ref|YP_003996138.1| glycine cleavage system T protein [Halanaerobium sp. 'sapolanicus']
gi|311905343|gb|ADQ15784.1| glycine cleavage system T protein [Halanaerobium sp. 'sapolanicus']
Length = 364
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 51/298 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A LQ IIT D L + I G I+ ++ K++++ F+
Sbjct: 56 SHMGELLLTGGGAEKSLQRIITNDAQLLDKGKVLYTLICNENGGIIDDLVVYKLQKNKFL 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
L ++ S + D + + L ++ IE + + +L+
Sbjct: 116 LVVNASNTEKDFDWIKEH-LDNDAQIENRTEHYAMLALQGPDSQKVLTKLTDLNLQEINY 174
Query: 107 ----EHTFSNSSFIDERFSIADVLLHRTWGHN-----------------EKIASDIKTYH 145
E + I R L + + E + + +
Sbjct: 175 YRFKEGKVAGKDMIISRTGYTGELGYELYFKAEYAEKIWHDIIKAGKKFEILPAGLGARD 234
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D I P+ A + + + L KG +IG+E + ++ + I R+R
Sbjct: 235 TLRLEKGFPLYGNDI-DENIDPYQAKLGWV--VKLDKGDFIGKEKLKELKRKGIKRERTG 291
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+ + G I +D EIG + A+ + D ++ K G+ +
Sbjct: 292 FMIQGRGVARKGHKIYCEDQEIGEVSSGSYSPLLKKGIAMGYIKSDYIEPGNKVGIKV 349
>gi|240102407|ref|YP_002958716.1| glycine cleavage system aminomethyltransferase T [Thermococcus
gammatolerans EJ3]
gi|259647497|sp|C5A3P0|GCST_THEGJ RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|239909961|gb|ACS32852.1| Glycine cleavage system T protein (aminomethyltransferase) (gcvT)
[Thermococcus gammatolerans EJ3]
Length = 398
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/334 (14%), Positives = 98/334 (29%), Gaps = 80/334 (23%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D
Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNLGNDTYMMVCDSDAF 117
Query: 75 DSL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLS 103
+ L I + + + K R + + I IN +
Sbjct: 118 EKLEAWFNAIKRGIEKFGSIDLEIENKTYDMAMFSVQGPKARDLAKDLFGI-DINDLWWF 176
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHN---------------------EKIASDIK 142
+E + R + + E+I + +
Sbjct: 177 QAKEVELDGIKMLLSRSGYTGENGWEVYFEDKNPYHPNPEKRGRPEKALHVWERILEEGE 236
Query: 143 TY----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGC 184
Y LR+ G + + P A +D I K
Sbjct: 237 KYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE- 293
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKA 238
+IG+E + + + R + RK +P G +L + IG +
Sbjct: 294 FIGKEALLKQKERGLGRKMVHFKMVDRGIPREGYKVLANGEVIGEVTSGTLSPLLGIGIG 353
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + ++ + + R P +Y
Sbjct: 354 IAFVKEEYAKPGLEIEVEIRGKPKRAVTVSPPFY 387
>gi|237799876|ref|ZP_04588337.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022731|gb|EGI02788.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 374
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLSGADAARSLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + L + IE +L+ + + + +
Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAGMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L E + LR+
Sbjct: 174 QFASVKLLGMQCYVSRSGYTGEDGYEISVPAEHAETLARCLLKEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E++ Q + +KR
Sbjct: 234 EAGLCLYGHDMDAQTSPIQASLLWAISKVRRADGARAGGFPGAELIFAQQANGVDKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ + D IG + G A+ D +
Sbjct: 294 LLPQERTPVREGTQIVDEQDSVIGKVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVR 353
Query: 259 VHGVRVKASF 268
V ++ S
Sbjct: 354 GKKVPMRVSK 363
>gi|138896001|ref|YP_001126454.1| glycine cleavage system aminomethyltransferase T [Geobacillus
thermodenitrificans NG80-2]
gi|196248894|ref|ZP_03147594.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
gi|166221553|sp|A4IQV5|GCST_GEOTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134267514|gb|ABO67709.1| Aminomethyltransferase, glycine cleavage system protein T
[Geobacillus thermodenitrificans NG80-2]
gi|196211770|gb|EDY06529.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
Length = 365
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 98/311 (31%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G ++PFLQ ++T DV L + + + + LI + ED ++
Sbjct: 50 SHMGEIIVRGGGSLPFLQKLMTNDVAKLRPGRVQYTLMCDESAGTVDDLLIYQKGEDDYL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFSN 112
L ++ + + L + +V +E +L+
Sbjct: 110 LVVNAANTEKDFAWLSEHA-DGDVELEDVSAETALLALQGPAAERVLQKLTDMDLSALRP 168
Query: 113 SSFID-----------ERFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
SF D R + E + +
Sbjct: 169 FSFQDGVEVASVKTLVSRTGYTGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKR 203
LR + + +TI P +A + + K +IGQ V+ + + R+
Sbjct: 229 DTLRFEACLPLYGQEL-SATISPLEAGLGF--AVKTEKEPPFIGQAVLKQQKEAGPPRRL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMAL 257
I +P G + E G + LA+ + + AI + + +
Sbjct: 286 VGIEMIDKGIPRHGYRVFAAGEEAGFVTTGTQSPTLKKNIGLALVKAEVA--AIGQEVEV 343
Query: 258 TVHGVRVKASF 268
+ G R+KA+
Sbjct: 344 DIRGKRLKATI 354
>gi|289642160|ref|ZP_06474311.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata]
gi|289508006|gb|EFD28954.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata]
Length = 460
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
+ + + R+ + PH+ L + L KGCY GQE V+
Sbjct: 306 AAGASLAGVGAFEAARVADRRPRLGAE-TDHRTIPHEVGW-LTTAVHLDKGCYRGQETVA 363
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV-----GKKALAIAR 243
R+ + +R +++ G+P+ +G +G V G ALAI +
Sbjct: 364 RVHNLGRPPRRMVLLHLDGTTVARGAPVSGGGRTVGFVGTSVVHAELGPIALAIVK 419
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 6/135 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ +++ G + +L +I + + LP + +L+P G + + +I+ +
Sbjct: 74 SHRGVLRITGVDRLSWLHSITSQHLAALPAMRGSEALVLSPHGHVEHHLMIA-DDGTATW 132
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L+++ +L+ L + V +++ + V+ + F+ D
Sbjct: 133 LDVEPGTSTALLAYLESMRFLLRVEPVDVHADHAVLSVLGPAAVD----VVASAFAPLDP 188
Query: 126 LLHRTWGHNEKIASD 140
LHR + + D
Sbjct: 189 PLHRPARRDVTVGYD 203
>gi|146306375|ref|YP_001186840.1| glycine cleavage system T protein [Pseudomonas mendocina ymp]
gi|145574576|gb|ABP84108.1| glycine cleavage system T protein [Pseudomonas mendocina ymp]
Length = 374
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 43/268 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A L+ ++ D++ LP + R + QG IL +++ + +DT
Sbjct: 55 SHMGQILLRGEHAARALETLVPVDIIDLPVGLQRYAMFTDAQGGILDDLMVANLGDDTLY 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + + IE +L+ + + S
Sbjct: 115 LVVNAACKDQDLAHLKKH-IGEQCQIECLFEERALLALQGPKAVDVLARLAPEVSKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L E A + LR+
Sbjct: 174 QVARVRLLGSECIVSRSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +T +L+ ++ + G + G E V Q + + RKR
Sbjct: 234 EAGLCLYGHDMSSATTPIEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVG 293
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ G+ I+ D IG +
Sbjct: 294 LLPQERVPVREGAEIVDADGTVIGQVCS 321
>gi|187919688|ref|YP_001888719.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN]
gi|187718126|gb|ACD19349.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN]
Length = 831
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 91/280 (32%), Gaps = 63/280 (22%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ A LQ ++ DV +P +A+L +G F ++++ +D ++L ++
Sbjct: 509 VKGRDAQSVLQGLVANDVD-VPNGTTVYTAMLNERGGYESDFTLTRLADDQYLLVTGTAQ 567
Query: 74 RDSLIDKLLF----------------YKL------RSN-----VIIEIQPINGVVLSWNQ 106
D + Y + RS V ++
Sbjct: 568 TTRDFDSIEKSIPHDRHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149
E ++ R + L + E +T H LRI
Sbjct: 628 ELDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-----IQHRNI-IRKR 203
G + P T P +A G+S C + +++ R ++ R +R+R
Sbjct: 688 EKGYRAWGRELTPDT-NPFEA------GLSF--ACKLDKDIAFRGRDALLKLRAEPLRRR 738
Query: 204 PMIIT---GTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
++++ TD + G IL D +G + L
Sbjct: 739 MVVLSANGATDRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778
>gi|31340124|sp|Q8CXD9|GCST_OCEIH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 371
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 56/295 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FLQ ++T D+ L A+ + + G + ++ K++++ ++
Sbjct: 52 SHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYL 111
Query: 67 LEIDRS--------------------------------------KRDSLID-------KL 81
L ++ + + L ++
Sbjct: 112 LVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQKCTDENVQEI 171
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-D 140
F++ ++NV ++ ++ +ID +A L G +
Sbjct: 172 KFFRFKNNVALKGIEAKALISRTGYTGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIG 231
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199
+ LR + + I P +A + + + KG +IG+EV+
Sbjct: 232 LGARDTLRFEANLALYGQEL-SKDISPIEAGLGF--AVKVNKGPDFIGKEVLKNQVENGT 288
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248
RK I +P +L D+ EIG + LA+ I +
Sbjct: 289 DRKLVGIEMIDKGIPRHEYEVLKDNKEIGFITSGTQSPTLNKNVGLALINISYTE 343
>gi|23099359|ref|NP_692825.1| aminomethyltransferase [Oceanobacillus iheyensis HTE831]
gi|22777588|dbj|BAC13860.1| aminomethyltransferase (glycine cleavage system T-protein)
[Oceanobacillus iheyensis HTE831]
Length = 385
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 56/295 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FLQ ++T D+ L A+ + + G + ++ K++++ ++
Sbjct: 66 SHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYL 125
Query: 67 LEIDRS--------------------------------------KRDSLID-------KL 81
L ++ + + L ++
Sbjct: 126 LVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQKCTDENVQEI 185
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-D 140
F++ ++NV ++ ++ +ID +A L G +
Sbjct: 186 KFFRFKNNVALKGIEAKALISRTGYTGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIG 245
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199
+ LR + + I P +A + + + KG +IG+EV+
Sbjct: 246 LGARDTLRFEANLALYGQEL-SKDISPIEAGLGF--AVKVNKGPDFIGKEVLKNQVENGT 302
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVD 248
RK I +P +L D+ EIG + LA+ I +
Sbjct: 303 DRKLVGIEMIDKGIPRHEYEVLKDNKEIGFITSGTQSPTLNKNVGLALINISYTE 357
>gi|172039259|ref|YP_001805760.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
ATCC 51142]
gi|171700713|gb|ACB53694.1| glycine cleavage system protein T [Cyanothece sp. ATCC 51142]
Length = 369
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 45/278 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ P LQ+++ +D+ L A+ + +L P G I+ ++ E+ +
Sbjct: 58 SHMGKFTLEGEGLFPMLQSLVPSDLERLTPGKAQYTVLLNPDGGIIDDIIVYCQGEEKAV 117
Query: 67 LEIDRSKRDSLIDK---------LLFYKLRS-NVIIEIQPINGV---------------V 101
+ ++ + +D L F + S V++ IQ V
Sbjct: 118 IIVNAATKDKDKKWILSNLGATSLNFTDVSSQKVLLAIQGPETVEKLQPLVEADLTQLSF 177
Query: 102 LSWNQEHTFSNSSFIDER------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+FI L R+ + LR+
Sbjct: 178 FGHTDTEVLGYPAFIARTGYTGEDGFEVMIDPEGGQELWRSLLQAGVTPCGLGARDTLRL 237
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ D T P +A + L + KG ++G+EV+ + Q +++R + +
Sbjct: 238 EAAMSLYGQDIDDHTT-PLEAGLKWLVHLD-KKGEFMGREVLEK-QATEGVKRRLVGLEM 294
Query: 210 TD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIA 242
+ G + ++ +G + KA+A+A
Sbjct: 295 EGRHIARHGYSVASEGKIVGEVTSGTIGPTVGKAIALA 332
>gi|114778855|ref|ZP_01453654.1| glycine cleavage system T protein [Mariprofundus ferrooxydans PV-1]
gi|114550890|gb|EAU53455.1| glycine cleavage system T protein [Mariprofundus ferrooxydans PV-1]
Length = 363
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/307 (16%), Positives = 97/307 (31%), Gaps = 56/307 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ ++V G +A+ FLQ + T DV L SA+L G + KI + + L
Sbjct: 55 HMGQVRVSGPAALAFLQYVTTNDVSKLATGQVHYSALLNESGTFIDDITTYKISDTVYYL 114
Query: 68 EIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
I+ + R + LL + +R +++ ++ + +D+
Sbjct: 115 CINAANRHKDVAHLLAEANNFDVR---VVDESDETTLLALQGAAAQQALQPLVDQDLESI 171
Query: 124 D------------------------------------VLLHRTWGHNEKIASDIKTYHEL 147
V + + L
Sbjct: 172 GYYKFAQVSVNGVSGIVSRTGYTGEDGFEIYIPNSNAVAVWTRLLAAGAEPIGLAARDML 231
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G + + P +A + + L KG +IG+E V + R+R + I
Sbjct: 232 RTEMGYALYGHEI-SDAVTPVEAKLMWI--TKLDKGDFIGREAVVARRAEG-ARQRLIAI 287
Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALTVHG 261
T +P + D + G + G ALA + + D + +A+ + G
Sbjct: 288 RLTGRGIPREHYKVFVDGAQSGEVTSGMHSPMAGGVALAYVKPEHAD---QGELAVEIRG 344
Query: 262 VRVKASF 268
V A
Sbjct: 345 KLVAAER 351
>gi|254470902|ref|ZP_05084305.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio
sp. JE062]
gi|211960044|gb|EEA95241.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio
sp. JE062]
Length = 824
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/317 (15%), Positives = 92/317 (29%), Gaps = 56/317 (17%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S+ I+V G A L + D+ ++P + L +G I ++++ E
Sbjct: 489 LYDMSSFGKIRVEGPDAESLLNHMCGGDM-SVPVGKIVYTQFLNERGGIEADLTVTRLSE 547
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS-----------------WN 105
++L + + L +K +NV+I L W+
Sbjct: 548 TAYLLVTPAATVVRELSWLNKHKAGANVVITDITAGEATLVVMGPNSRELLSKVSNHDWS 607
Query: 106 ---------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------ 144
QE R S L + + A +T
Sbjct: 608 NENHPFGTMQEIELGMGLARAHRVSYVGELGWELYVSTDMAAHAYETLIEAGADLDLKLC 667
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
LRI G D +A + +S K +IG++ V R + +
Sbjct: 668 GLHAMDSLRIEKGFRHFGHDITEEDHV-LEAGLGF--AVSTKKPSFIGRDAVLRKKEEGL 724
Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHA 250
+ + + L P+L D +G L G L + + +
Sbjct: 725 SSRMLQFKLKDAEPLLHHNEPVLRDGEIVGYLTSGNYGHTLGGAVGLGYVPCKGETIKDM 784
Query: 251 IKKGMALTVHGVRVKAS 267
+ + V G A
Sbjct: 785 LASTYQIDVEGTLCDAE 801
>gi|160946853|ref|ZP_02094056.1| hypothetical protein PEPMIC_00814 [Parvimonas micra ATCC 33270]
gi|158447237|gb|EDP24232.1| hypothetical protein PEPMIC_00814 [Parvimonas micra ATCC 33270]
Length = 367
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 94/314 (29%), Gaps = 57/314 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A ++ +IT D+ T+ S + G ++ L+ + +D
Sbjct: 51 SHMGEVTVKGKDAFDYVNHLITNDLTTIGDGQVIYSLLCNENGGVVDDLLVYRKGKDDMY 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
+ ++ + D L K +V I+ ++
Sbjct: 111 IVVNAANTDKDFAWFLKQKGNYDVEIKNISSETAQIALQGPKAEKILQKLAKDVDLANEI 170
Query: 113 --------------SSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
F+ R +G E + K + E
Sbjct: 171 KFFTFKENVQLGDCGKFLVSRTGYTGEDGFEIYGSGEDMN---KLWDEILKIGKEDGVMP 227
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR + + I P +A + + + +IG+ +++++
Sbjct: 228 CGLGCRDTLRFEAALPLYGNEM-DDVITPLEAGLGYFVKLK-QEADFIGKAPLAKMKEAG 285
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254
+ RK + + G+ + D EIG + K +A +D I
Sbjct: 286 VPRKLIGLELTGKGIARHGAKVFKGDKEIGFVTTGYMSPTLGKTIANVIVDADQAEIGNE 345
Query: 255 MALTVHGVRVKASF 268
+ + + +V A
Sbjct: 346 VQVEIRNKKVPAVL 359
>gi|254173352|ref|ZP_04880025.1| glycine cleavage system T protein [Thermococcus sp. AM4]
gi|214032761|gb|EEB73590.1| glycine cleavage system T protein [Thermococcus sp. AM4]
Length = 398
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/334 (14%), Positives = 97/334 (29%), Gaps = 80/334 (23%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D
Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAF 117
Query: 75 DSL------IDK------------------LLFY-----KLR--SNVIIEIQPINGVVLS 103
+ L I + + + K R + + I IN +
Sbjct: 118 EKLEAWFNAIKRGIEKFGELDLEIENKTYDMAMFSVQGPKARDLAKDLFGI-DINDLWWF 176
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHN---------------------EKIASDIK 142
+E + R + + E+I +
Sbjct: 177 QAKEVELDGIKMLLSRSGYTGENGWEVYFEDANPYHPNPEKRGKPEKALHVWERILEAGE 236
Query: 143 TY----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGC 184
Y LR+ G + + P A +D I K
Sbjct: 237 KYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDF--AIFWDKE- 293
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKA 238
+IG+E + + + R + RK +P G +L + IG +
Sbjct: 294 FIGKEALLKQKERGLGRKLVHFKMVDKGIPREGYKVLANGEVIGEVTSGTLSPLLGIGIG 353
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + ++ + + + P +Y
Sbjct: 354 IAFVKEEYAKPGVELEIEIRGKPKKAVTVTPPFY 387
>gi|186683888|ref|YP_001867084.1| glycine cleavage system aminomethyltransferase T [Nostoc
punctiforme PCC 73102]
gi|186466340|gb|ACC82141.1| glycine cleavage system T protein [Nostoc punctiforme PCC 73102]
Length = 392
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 101/277 (36%), Gaps = 44/277 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64
S+ + GK+ I LQ+++ +D+ L A+ + +L Q I+ ++ EDT
Sbjct: 73 SHMGKFTLQGKNLISQLQSLVPSDLSRLQPGQAQYTVLLNHQAGIIDDIIVYYQGEDTTG 132
Query: 65 ---FILEIDRSK----RDSLIDKLLFYKLR------SNVIIEIQPINGV----------- 100
+ ++ + + ++ L K++ V+I +Q +
Sbjct: 133 IQKAFIIVNAATSGKDKAWILQHLDLDKVQFQDLSPDKVLIAVQGTKAIKYLQPLVQEDL 192
Query: 101 ----VLSWNQEHTFSNSSFI-------DERFSIA-----DVLLHRTWGHNEKIASDIKTY 144
+ +F+ ++ F + V L R+ + I +
Sbjct: 193 QPIKAFGHLEATLLGKPAFLARTGYTGEDGFEVMVDLDVGVELWRSLHKSGVIPCGLGAR 252
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + D T P +A + L + TKG +IG+EV++ + + + R+
Sbjct: 253 DTLRLEAAMALYGQDI-DDTTTPLEAGLGWLVHLD-TKGDFIGREVLAEQKSKGVKRRLV 310
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ T ++ G +L+ +G + L
Sbjct: 311 GLQTQGRNIARHGYQVLSTGKVVGEVSSGTLSPTLGY 347
>gi|330837169|ref|YP_004411810.1| aminomethyltransferase [Spirochaeta coccoides DSM 17374]
gi|329749072|gb|AEC02428.1| aminomethyltransferase [Spirochaeta coccoides DSM 17374]
Length = 361
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 98/308 (31%), Gaps = 52/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + + G A+ +Q I T D + R + + +G IL ++ K++ED +
Sbjct: 51 SHMAEMTLEGPDALENIQRIFTNDFRNMKKGRVRYTLMCNEKGGILDDLVVCKMDEDRYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+ ++ S R + + L +V +I ++ + +
Sbjct: 111 MVLNASNRAKDAAWIQEH-LEGDVRFTDISDSTALIALQGPAAPAILARLAEPAVIPEKY 169
Query: 119 ---------------------------RFSIADVLLHRTW-------GHNEKIASDIKTY 144
F A R W + + +
Sbjct: 170 YTLVEDGRVGDISCIISRTGYTGELGYEFFCAPADAQRLWELLLATGAPDGLVPCGLAAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + + P A + + + KG +IG+ + ++ +++ R
Sbjct: 230 DTLRLEAAMPLYGHEM-DEDTTPFQAGLHF--AVKMDKGDFIGRNALDGMEAPDVV--RV 284
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260
+ + + I + +IG KA+A+A ++K A + V
Sbjct: 285 GLEVTSRGIVREHEDIYLGEKKIGHTTSGTMCPGIGKAVAMAYVEKEASAEGTELEADVR 344
Query: 261 GVRVKASF 268
G R+
Sbjct: 345 GRRIGVKV 352
>gi|33860834|ref|NP_892395.1| hypothetical protein PMM0276 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633776|emb|CAE18735.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 282
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 19/249 (7%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V GK + FL I T +++ L S L+P G IL L E + +
Sbjct: 20 SVTGKDSKRFLNGITTGNIVDLN-NKVLKSCWLSPNG-ILKSLLEINCSEKELKVIVLVG 77
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
+ S+ ++ + ++ Q+ NS I + + + +
Sbjct: 78 NTSEIRKYFNDIIFPSD---DVSLSDSFSINRLQQVDDMNSWRITQPIFLKNEDKKYDFY 134
Query: 133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
N + + +IN I N++ P + + L I KGCY+GQE +S
Sbjct: 135 KNNPNSMNTNDLQLWKINQAIPSLNSEI-NGKNNPLELGLTDL--IDFNKGCYLGQETMS 191
Query: 193 RIQHRNIIRK--RPMIITGTDDLPPSGSPILTD----DIEIGTLGVVV-----GKKALAI 241
+I++ + +++ R D S + IL + + +G + + K LA+
Sbjct: 192 KIKNVSSLKQEIRVWTAKDKDVNLESVNKILFNNQNKEKSVGYITSIYVLESRIIKGLAM 251
Query: 242 ARIDKVDHA 250
+ +D
Sbjct: 252 IKRKYLDKG 260
>gi|254281873|ref|ZP_04956841.1| aminomethyltransferase [gamma proteobacterium NOR51-B]
gi|219678076|gb|EED34425.1| aminomethyltransferase [gamma proteobacterium NOR51-B]
Length = 409
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 75/302 (24%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ A+ L ++T D+ L G+++ I +++++ ++L
Sbjct: 79 VEGEDALAMLDRMVTRDLTKLRVNRITYCCWCDDTGRMIDDGTIFRLDDNRYMLTCGSPC 138
Query: 74 RDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111
+ L L V I LS +FS
Sbjct: 139 ----LAWLAKSALGFDKVTITEHTEQLAGLSLQGPTSFSTLKNMGVGDAVAELKPFGFTR 194
Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147
+ + R L + W E + + L
Sbjct: 195 VPFVGTELMISRTGFTGDLGYELWIDAEY---ALPLWDALYEAGEDYGIQPYGEAATNMA 251
Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
R+ G + P +F P + + L + K + G+ + + +
Sbjct: 252 RLEAGFIMPYMEFNEAPKTINFEHDQTPLELNLGWL--VDFKKPHFNGRRALLEQKQKGT 309
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDI----EIGTLG------VVVGKKALAIARIDKVDH 249
K+ ++ + P+ IL D +IG + V ALA+ +
Sbjct: 310 --KQLLVKLDIEGNKPAEEAILYDSKGCRNQIGYVTSAMWSPSVKANIALAMIDTKALTG 367
Query: 250 AI 251
I
Sbjct: 368 EI 369
>gi|154706229|ref|YP_001423712.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii
Dugway 5J108-111]
gi|164685915|ref|ZP_01947229.2| glycine cleavage system T protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212217958|ref|YP_002304745.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii
CbuK_Q154]
gi|154355515|gb|ABS76977.1| aminomethyltransferase [Coxiella burnetii Dugway 5J108-111]
gi|164601436|gb|EAX32156.2| glycine cleavage system T protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012220|gb|ACJ19600.1| aminomethyltransferase [Coxiella burnetii CbuK_Q154]
Length = 383
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ +
Sbjct: 70 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 129
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD I + V I +P ++ + + S DE
Sbjct: 130 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 189
Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147
D+ + RT E A+D+ L
Sbjct: 190 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 249
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ TD T P + + + +IG+ + + N+ + ++
Sbjct: 250 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 308
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ + + + G + A+A+AR+ V K + +
Sbjct: 309 MEEPGVLRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 367
Query: 264 VKASFPH 270
VK P
Sbjct: 368 VKIIKPP 374
>gi|226227905|ref|YP_002762011.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27]
gi|226091096|dbj|BAH39541.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27]
Length = 374
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 89/274 (32%), Gaps = 43/274 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G AI F+ ++ + DV L + S +L G I+ L+ + D +
Sbjct: 62 SHMGEVIVRGPDAIRFVSSVTSNDVAALGIGQVQYSTLLRADGTIVDDLLVYRFA-DHLM 120
Query: 67 LEIDRSKRDSLIDKLLFY---------------KLRS---------NVIIEIQPINGVVL 102
L I+ S RD + L + L + + P++GV
Sbjct: 121 LVINASNRDKDLAHLQAHLAGFDCTMEDISDATALLAVQGPQAPAIVAALADVPLDGVKY 180
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTW--------------GHNEKIASDIKTYHELR 148
W E + I R L + + LR
Sbjct: 181 YWFTEGRVAGVPCIISRTGYTGELGFELYFDATHATAVWNAVMAAGAVTPCGLGARDTLR 240
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ + I P +A ++ L + L K ++G++V+ R RK
Sbjct: 241 LEAGLCLYGNEL-DDQITPLEAGLNWL--VKLGKAEPFLGKDVLVRQHQDGTDRKLVGFT 297
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+P G P++ + G + L I
Sbjct: 298 FEERAIPRHGYPVVYGGVAFGEVRSGTMSPTLGI 331
>gi|294674704|ref|YP_003575320.1| aminomethyltransferase [Prevotella ruminicola 23]
gi|294472596|gb|ADE81985.1| aminomethyltransferase [Prevotella ruminicola 23]
Length = 369
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/296 (17%), Positives = 96/296 (32%), Gaps = 51/296 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++Q I T D+ P + G + L+ K+ E+ F
Sbjct: 61 SHMGEVTVKGPDAERYVQHIFTNDIAGAPVGKIYYGMMCYENGGTVDDLLVYKMGENDFF 120
Query: 67 LEIDRSKRD---------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
L I+ + D L ++ FY I +Q +
Sbjct: 121 LVINAANIDKDWAWMQQNAEGFDIDLQNRSDFYG-----QIAVQGPESEHIVETVLGLPC 175
Query: 112 NSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY-----HELR 148
+I DV++ RT E IA+ ++ LR
Sbjct: 176 AELVFYTCKTIGDVIISRTGYTGEDGFEIYANHDYIRECWDKLIAAGVQACGLGCRDTLR 235
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + I P A + + + L K +IG+E +++ + +K I
Sbjct: 236 FEVGLPLYGDEL-SEDITPIMAGLGMF--VKLDKTEFIGKEALAKQKAEGPAKKLVGIEL 292
Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+P G + + IG + K++ +A ID + + + +
Sbjct: 293 MDKAIPRHGYTVLNMAGEPIGEVTTGYHTLSTDKSVCMALIDAAYAKLDTEVQIQI 348
>gi|242242809|ref|ZP_04797254.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis W23144]
gi|242233710|gb|EES36022.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
epidermidis W23144]
Length = 363
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 106/312 (33%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ GK A F+Q I++ D L A SA+ +G ++ + K+ E+ ++
Sbjct: 53 SHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNEEGGVIDDLVTYKLNENHYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + + + + SN +++ G + + +D +
Sbjct: 113 LIVNAANTNKDYQWIKKHS--SNFTVDVSNTSDKYGQLAIQGPRSRALINELVDVDVNHM 170
Query: 124 DVL-------------------------------------LHRTWGHNEKIASDIKTYHE 146
+ + + +
Sbjct: 171 AMFEFKQNVQLFGKSIILSQSGYTGEDGFEIYCKQEDTKDIWEQLLKYDVTPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D +I P++ GI+ +IG+ V+ + R
Sbjct: 231 LRLEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIANDFIGKSVLKAQKENGSER 283
Query: 202 KRPMIITGTDDLPPSGSPILTDDI-EIGTLGVV----VGKKALAIARIDKVDHAIKKGMA 256
+ + + +G +L ++ +IG + K++A+A ID+ + K +
Sbjct: 284 RTVGLELLGKGIARTGYEVLDENSNQIGFVTSGTQSPSSGKSIALAIIDRGAFEMGKKVI 343
Query: 257 LTVHGVRVKASF 268
+ + +V+A
Sbjct: 344 VQIRKRQVEAKI 355
>gi|163849026|ref|YP_001637070.1| glycine cleavage system T protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526989|ref|YP_002571460.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl]
gi|163670315|gb|ABY36681.1| glycine cleavage system T protein [Chloroflexus aurantiacus
J-10-fl]
gi|222450868|gb|ACM55134.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl]
Length = 367
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 100/312 (32%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FLQ ++T DV +P A + P G I+ + + D F+
Sbjct: 50 SHMGRFMVRGAHAEAFLQQMVTCDVRAIPLGHASYGLLCRPDGGIVDDVFLYHLP-DEFM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID--- 117
+ ++ + R D L + V IE + +L+ +S+ D
Sbjct: 109 VVVNAANRQKDWDWLQQHTAGFEVEIEDRSERWAMLALQGPQAEQLLAGAESSTTADIGS 168
Query: 118 -ERFSIA-------DVLLHRT--------------------------WGHNEKIASDIKT 143
+A + L+ RT G N A +
Sbjct: 169 LPFHGVAMTTIFGQNALIARTGYTGEDGFEIFFEAVHAEQFWHGLLALGGNAVQACGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR + + T P++A + + + L KG +IG+E + I+ + R+
Sbjct: 229 RDSLRFEACLALYGHEI-DETTNPYEARLGWV--VKLDKGDFIGREALQAIKQNGVSRRL 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256
+ +G P+ D +G + + +A D
Sbjct: 286 VGFEMVGKGIARAGYPVHRPDGEPVGFVTSGMPSPTLGRPLGMAYVPTDLSSEG--SEFD 343
Query: 257 LTVHGVRVKASF 268
+ V V+A
Sbjct: 344 VIVRERPVRARV 355
>gi|161829873|ref|YP_001597538.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii
RSA 331]
gi|212211762|ref|YP_002302698.1| glycine cleavage system aminomethyltransferase T [Coxiella burnetii
CbuG_Q212]
gi|161761740|gb|ABX77382.1| glycine cleavage system T protein [Coxiella burnetii RSA 331]
gi|212010172|gb|ACJ17553.1| aminomethyltransferase [Coxiella burnetii CbuG_Q212]
Length = 383
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ +
Sbjct: 70 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 129
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD I + V I +P ++ + + S DE
Sbjct: 130 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 189
Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147
D+ + RT E A+D+ L
Sbjct: 190 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 249
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ TD T P + + + +IG+ + + N+ + ++
Sbjct: 250 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 308
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ + + + G + A+A+AR+ V K + +
Sbjct: 309 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 367
Query: 264 VKASFPH 270
VK P
Sbjct: 368 VKIIKPP 374
>gi|165924198|ref|ZP_02220030.1| glycine cleavage system T protein [Coxiella burnetii RSA 334]
gi|165916361|gb|EDR34965.1| glycine cleavage system T protein [Coxiella burnetii RSA 334]
Length = 381
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ +
Sbjct: 68 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 127
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD I + V I +P ++ + + S DE
Sbjct: 128 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 187
Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147
D+ + RT E A+D+ L
Sbjct: 188 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 247
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ TD T P + + + +IG+ + + N+ + ++
Sbjct: 248 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 306
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ + + + G + A+A+AR+ V K + +
Sbjct: 307 MEEPGVLRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 365
Query: 264 VKASFPH 270
VK P
Sbjct: 366 VKIIKPP 372
>gi|294055375|ref|YP_003549033.1| glycine cleavage system T protein [Coraliomargarita akajimensis DSM
45221]
gi|293614708|gb|ADE54863.1| glycine cleavage system T protein [Coraliomargarita akajimensis DSM
45221]
Length = 363
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 51/312 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FL ++ + + P A S + G ++ ++ +I ED F+
Sbjct: 52 SHMGEFHVTGSDAERFLDQLVVNRIASAPNGKAIYSPMCASDGGVVDDLIVYRIAEDDFL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS--------------------- 103
+ ++ S + LL R V I + + +L+
Sbjct: 112 VCVNASNIEKDFGWLLKQAERWQLEVSITDRSADYALLALQGPKAETIMIDAGFTEASDL 171
Query: 104 ---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143
W+ E F+ R + + + +
Sbjct: 172 KRFWHMETNFAGGQIRICRTGYTGEDGFEIYVSPQSAEALAKQLIQSGDAFGLKLCGLGA 231
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G+ + I P +A +D + L K +IG+ +S + + + R+
Sbjct: 232 RDSLRLEAGLPLYGHEL-SDEITPLEASLDWT--VKLQKEDFIGKAALSEQKAQGVPRRV 288
Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALT 258
+ G+ ++ + +G + A + A ID + L
Sbjct: 289 IHFKLDGRRIAREGTAVINEQGEPVGRVLSGTLSPASKSPIGSAIIDSKFLGSPLAVDLR 348
Query: 259 VHGVRVKASFPH 270
+ + +K + P
Sbjct: 349 GNQIALKIAQPP 360
>gi|323704578|ref|ZP_08116156.1| glycine cleavage system T protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536040|gb|EGB25813.1| glycine cleavage system T protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 369
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 85/284 (29%), Gaps = 51/284 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK + F+ ++T D+ + A S + G + L+ K + ++
Sbjct: 55 SHMGEIIVEGKDSEKFINYMVTNDITKITENQAMYSPMCYHNGTTVDDLLVYKFSYEKYM 114
Query: 67 LEIDRSKRDSLIDKL----LFYKLRSN--------------------VIIEIQPINGVVL 102
L ++ S D L + + I ++ +
Sbjct: 115 LVVNASNIDKDYKWLWENKNGFDVEIKDESGEISELALQGPKSQEILEKITNYDLDSLKY 174
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIKTYH 145
+ + R + NE +A + +
Sbjct: 175 YHFDYMDLDGINCLVSRSGYTGEDGFEIFLKNEYVANMWEKILSVGENLGIKPAGLGARD 234
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR G+ + I P +A + + L K +IG+E + + + RK
Sbjct: 235 TLRFEAGLPLYGNEL-SDDITPLEAGLGSF--VKLDKS-FIGKEALLNQKEEGLKRKIVG 290
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243
+ +P G + + +IG + +A+ +
Sbjct: 291 FEMADNAIPRHGYDVYAEGEKIGYVTTGYLSPTLKKNIGMALIK 334
>gi|83590777|ref|YP_430786.1| aminomethyltransferase [Moorella thermoacetica ATCC 39073]
gi|123766727|sp|Q2RH46|GCST_MOOTA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|83573691|gb|ABC20243.1| aminomethyltransferase [Moorella thermoacetica ATCC 39073]
Length = 366
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 83/283 (29%), Gaps = 50/283 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A+ +Q ++T D S + P G ++ L+ E ++
Sbjct: 52 SHMGEITIKGPDALALVQKLLTNDADRATGDRVIYSPMCYPDGGVVDDLLVYPRGEGEYL 111
Query: 67 LEIDRSKRDSLIDKLL--FYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDE----- 118
L ++ D + R V I + + +D
Sbjct: 112 LVVNAGNIDKDFAWIQENASGFRVEVSNISAATAQLALQGPRALEILRPLTRVDLASLGY 171
Query: 119 -RFSIADVLLHRTW--------------------------------GHNEKIASDIKTYH 145
R++ VL + + +
Sbjct: 172 YRWTEGQVLGVHCLISRTGYTGEDGFELYFEAAAAPTMWRNILAAGREAGLVPAGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + + P I P +A + + L KG + G+E ++ + + R+
Sbjct: 232 TLRLEAALPLYGHELGPD-ISPLEAGLHRF--VRLEKGEFNGREALAAQREAGVRRQLVG 288
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+ +P P+L EIG + ALA+
Sbjct: 289 LTMIDRGIPRPEYPVLAAGKEIGYVTSGSLAPTLGQNIALALV 331
>gi|215919234|ref|NP_820697.2| glycine cleavage system aminomethyltransferase T [Coxiella burnetii
RSA 493]
gi|206584118|gb|AAO91211.2| aminomethyltransferase [Coxiella burnetii RSA 493]
Length = 391
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ +
Sbjct: 78 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 137
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD I + V I +P ++ + + S DE
Sbjct: 138 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 197
Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147
D+ + RT E A+D+ L
Sbjct: 198 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 257
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ TD T P + + + +IG+ + + N+ + ++
Sbjct: 258 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 316
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ + + + G + A+A+AR+ V K + +
Sbjct: 317 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 375
Query: 264 VKASFPH 270
VK P
Sbjct: 376 VKIIKPP 382
>gi|150376992|ref|YP_001313588.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
gi|150031539|gb|ABR63655.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
Length = 825
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 91/281 (32%), Gaps = 51/281 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + V G+ A L I AD+ + + + +L +G + ++ D F+
Sbjct: 488 TSFAKLLVQGRDAAKALNRICAADID-VEIGRSIYTGMLNARGGYESDLTVMRLAPDRFL 546
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE-----------HTFSNSS 114
+ ++ D + + ++V + + VL+ SN+
Sbjct: 547 IVTGSAQAVHDADWIRRNIPVDAHVTLTDVTSSYAVLALMGPNARDILGRITSADLSNAG 606
Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIASDIKTYH-------------- 145
F R + L +E + H
Sbjct: 607 FPFSTICEIDIGYATAFANRMTYVGELGWELIVPSEFAVGVYEALHEAGRDLGLIDCGYY 666
Query: 146 ---ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR 201
LRI G + + P I P++A + +SL K G +IG+E + R +
Sbjct: 667 ALEALRIEKGFRAWSRELTPD-INPYEAGLAF--AVSLDKPGGFIGREALVRARQAGPPV 723
Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALA 240
KR + T D P G IL D +G + L
Sbjct: 724 KRIVQFTLDDAEPMLWGGELILRDGKPVGEVRSAAYGHTLG 764
>gi|70731985|ref|YP_261727.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5]
gi|68346284|gb|AAY93890.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5]
Length = 374
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/306 (16%), Positives = 99/306 (32%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G +A L+ ++ D++ LP + R + QG IL +++ + ++
Sbjct: 55 SHMGQILLRGANAAQALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDEQLF 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------- 119
L ++ + +D + L + L I+ +L+ + + +
Sbjct: 115 LVVNAACKDQDLAHLRRH-LGEQCDIQPLFEERALLALQGPAAVTVLARLAPEVAQMTFM 173
Query: 120 ------------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ A+ L E A + LR+
Sbjct: 174 QFKPVTLLGVDCFVSRSGYTGEDGFEISVPAAQAEKLARALLAEPEVAAIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL----NGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ + G + G EV+ Q + RKR
Sbjct: 234 EAGLCLYGHDMNSDTTPIQASLLWAISKARRADGARAGGFPGAEVIFAQQQGGVSRKRVG 293
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ IG++ G A+ I+ A+ +A
Sbjct: 294 LLPQERTPVREGAEIVDAQGKVIGSVCSGGFGPTLGGPLAMGYLDIEHC--ALDTPVAAI 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|319783026|ref|YP_004142502.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168914|gb|ADV12452.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 816
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 84/289 (29%), Gaps = 58/289 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + D+ + + +L +G I +S++ E F
Sbjct: 491 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIVYTQMLNQRGGIESDLTVSRLSETAF 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVV--------------------- 101
L + + + L + ++ V+ ++ V+
Sbjct: 550 FLVVPGATLQRDLAWLRKHV--ADEFVVVTDVTAAESVLCLMGPDARKLIQKVSPNDFSN 607
Query: 102 ----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SD 140
QE R + L + ++ A
Sbjct: 608 EKNPFGTYQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEVVEEAGVDVGLKLCG 667
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ T RI D +A + + KG +IG++ V R + +
Sbjct: 668 LHTLDSCRIEKAFRHFGHDITDEDNV-LEAGLGF--AVKTAKGDFIGRDAVLRKKEAGLS 724
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
R+ + + L IL D +G + G L
Sbjct: 725 RRLVQFRLKDPEPLLFHNEAILRDGKIVGPITSGNYGHHLGGAVGLGYV 773
>gi|91778442|ref|YP_553650.1| dehydrogenase [Burkholderia xenovorans LB400]
gi|91691102|gb|ABE34300.1| Dehydrogenase [Burkholderia xenovorans LB400]
Length = 831
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 51/274 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69
V G+ A LQ I+ DV +P + +L +G F ++++ +D ++L
Sbjct: 509 VKGRDAQSVLQGIVANDVD-VPAGTTVYTGMLNERGGYESDFTLTRLTDDQYLLVTGSAQ 567
Query: 70 ---DRSKRDSLI---DKLLF------YKL------RSN-----VIIEIQPINGVVLSWNQ 106
D + I Y + RS V ++
Sbjct: 568 TTRDFDAIERAIPHDKHCTLVDVTGQYAVLAVMGPRSRELLQSVSKADWSNEAFAFGQSR 627
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149
E ++ R + L + E +T H LRI
Sbjct: 628 EVDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHAAGKAFGLVNAGYYAIDSLRI 687
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + P T P +A + + + G++ + +++ + +R+R +++T
Sbjct: 688 EKGYRAWGRELTPDT-NPFEAGLSFACKLD-KDIAFRGRDALLKLRAQ-PLRRRMVVLTA 744
Query: 210 TDDL---PPSGSPILTDDIEIGTLGVVVGKKALA 240
G IL D +G + L
Sbjct: 745 DGAAQRMLWGGEAILRDGKPVGFVSSAAFGHTLG 778
>gi|330890521|gb|EGH23182.1| glycine cleavage system T protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 336
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 89/266 (33%), Gaps = 43/266 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 72 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLM 131
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L + IE +L+ + + + +
Sbjct: 132 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 190
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 191 QFASVKLLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 250
Query: 150 NHGIV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +TD P A+ + G + G E V Q + +KR
Sbjct: 251 EAGLCLYGHDMDTDTSPVEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVG 310
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTL 230
++ G+ I+ + IGT+
Sbjct: 311 LLPEERTPVREGTEIVDEQGAVIGTV 336
>gi|145595831|ref|YP_001160128.1| glycine cleavage system aminomethyltransferase T [Salinispora
tropica CNB-440]
gi|145305168|gb|ABP55750.1| glycine cleavage system T protein [Salinispora tropica CNB-440]
Length = 387
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 51/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ ++V G A F+ A ++ D+ + A+ + G ++ + D
Sbjct: 76 SHLGKVRVTGMGAADFVNACLSNDLARIEPGRAQYTLCCDDAAGGVVDDIIAYLYAYDHV 135
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106
L + + ++ +L S + I + VL+
Sbjct: 136 FLIPNAANTAEVVRRLQA-AAPSPITITDEHEAYAVLAVQGPRSADLLGALGLPTEHDYM 194
Query: 107 ---EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTYHELR 148
E T + + R L + + A + LR
Sbjct: 195 SFAEGTLAGADLTVCRTGYTGELGYELILPAADAGGVWDALFAADEQLQACGLAARDTLR 254
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G D I P A + K + G+ + + R+ ++
Sbjct: 255 TEMGYPLHGQDLSRE-ITPVQARSGW--AVGWDKPAFWGRAALVAEKSAGPRRRLRGLVA 311
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH---- 260
+P G + + +GT+ K+ +A+A ID + A+ +G+ L V
Sbjct: 312 VDRAIPRPGMVVYHGETPVGTVTSGTFSPTRKQGIALALID-TEPALAEGVDLEVDIRGR 370
Query: 261 GVRVKASFPH 270
V+ P
Sbjct: 371 RATVRLVRPP 380
>gi|288802493|ref|ZP_06407932.1| glycine cleavage system T protein [Prevotella melaninogenica D18]
gi|288335021|gb|EFC73457.1| glycine cleavage system T protein [Prevotella melaninogenica D18]
Length = 361
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 85/263 (32%), Gaps = 40/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A F+ I T DV L I P G ++ I K+++ ++
Sbjct: 51 SHMGEVIVSGPEADKFINHIFTNDVNGLAAGKVLYGMICYPDGGVVDDTCICKLDDHLYL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111
+ I+ S D I + +VIIE + L+ S
Sbjct: 111 MTINASNIDKDIAWIEQNAEGFDVIIENKSEAYGQLAIQGPKAESMLEDVLGLACKELKF 170
Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKI-------------ASDIKTYHELRI 149
+ I R +G E I + LR
Sbjct: 171 YEVKRLQQDGTEVIVSRTGYTGEDGFEVYGTPEYIVKIWDKLIEAGVKPCGLGCRDTLRF 230
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + I P A + + + K +IG+E + + + + ++ I
Sbjct: 231 EVGMPLYGNEL-SDKITPVMAGLSMF--VKFDKEEFIGKEALLKQKAEGVSQRLRGIELD 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232
+ +P G +L D +E+G +
Sbjct: 288 DNAIPRHGYKVLKDGVEVGEVTT 310
>gi|148655664|ref|YP_001275869.1| glycine cleavage system T protein [Roseiflexus sp. RS-1]
gi|148567774|gb|ABQ89919.1| glycine cleavage system T protein [Roseiflexus sp. RS-1]
Length = 371
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 94/277 (33%), Gaps = 64/277 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A+PFLQ ++T DV +P A + + P G I+ I + D ++
Sbjct: 55 SHMGEVEVRGPDALPFLQYLVTYDVAAIPPGRANYALMCRPDGGIIDDTFIYNLG-DYYL 113
Query: 67 LEIDRS-----------------------------------KRDSLIDKLLFYKLRSNVI 91
+ ++ + ++L+ ++ ++
Sbjct: 114 IVVNAANTAKDVAWMHECAKGFNVTVSDVSDQTGMLALQGPLAEALLAQV------ADAD 167
Query: 92 IEIQPINGVV-------------LSWNQEHTFSNSSFIDERFSIADVLL--HRTWGHNEK 136
+ P +GV+ + E F + + D LL RT G
Sbjct: 168 LAALPFHGVMQGRVVHTPAIVARTGYTGEDGFEIFVAAGDVTRVWDELLDAGRTIGLKP- 226
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LR + + P++A + + + L KG +IG+E + RI+
Sbjct: 227 --CGLGARDSLRFEACLALYGHEIT-EETNPYEARLGWV--VKLDKGDFIGREALQRIKQ 281
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232
+ R+ + S I + IG +
Sbjct: 282 EGVARRLTGFEMAGRGIARSEYEIRDLEGAPIGRVTS 318
>gi|33239760|ref|NP_874702.1| aminomethyltransferase related to glycine cleavage protein T
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237285|gb|AAP99354.1| Aminomethyltransferase related to glycine cleavage protein T
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 280
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 42/252 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G FLQ TAD+L + + L+P G++ I ++ +T +
Sbjct: 18 LEGADNKKFLQGQTTADILGVRDGGLLRTCWLSPVGRLKALLEI-RLVGETISFIVLGGN 76
Query: 74 RDSLIDKLLFYKLRS-NVIIEIQPI---------NGVVLSWNQEHTFSNSSFID--ERFS 121
D +ID + V I N E ++ + E+
Sbjct: 77 IDEVIDGFDKVIFPADKVNIRASKEIRRLQKINYNESWKVTPVEWLLPSAELPNDFEKLK 136
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
A + + W + + Y I P + + L I
Sbjct: 137 PASKEMTQEWSLIQGLP-----YDLFEI------------DGNSNPLELGLSDL--IDFD 177
Query: 182 KGCYIGQEVVSRIQHRNIIRKRPM-----IITGTDDLPPSGSPILTDDIEIGTLGV---- 232
KGCY+GQE +++I++ ++ + I D S + + +G +
Sbjct: 178 KGCYLGQETLAKIKNIGRLKCQLRYFKSQRILRKGDSLNISSIDINEKQNVGIVVASKTF 237
Query: 233 -VVGKKALAIAR 243
LA+ +
Sbjct: 238 GSSSSIGLALIK 249
>gi|291334249|gb|ADD93913.1| glycine cleavage T protein aminomethyl transferase [uncultured
marine bacterium MedDCM-OCT-S08-C1622]
Length = 393
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 80/271 (29%), Gaps = 56/271 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G + +L ++T DV L + G+++ I ++ E + L
Sbjct: 65 RFTGPDSCAYLNRLVTRDVSKLAINRVAYTVWCDDNGQVMDDGTIFRLGESDYRLCAYAR 124
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------------ 108
D L+ + +V I + L+
Sbjct: 125 CLDWLMWSAEGF----DVTIVDETAEVAALAVQGPTSCAVFKDMGFEGIENLKPFGMTYY 180
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTYHELRINH 151
F +S + R L + W + A+ LR
Sbjct: 181 PFESSQVMISRTGFTGDLGYEVWIEPDLAEAFWDAMFEAGKLRGIRAAGSAALDMLRTET 240
Query: 152 GIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G + DF+P+ P + + L +S K + G++ + + + R
Sbjct: 241 GFLQAGVDFIPAEEAIRTGRSRSPFELGLGWL--VSFDKPVFNGRKALLKEKKEGS-RYA 297
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ + + P + I + + E+GT+
Sbjct: 298 FVYLDVEGNKPAESAFIYSGNKEVGTVTTAA 328
>gi|330502286|ref|YP_004379155.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01]
gi|328916572|gb|AEB57403.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01]
Length = 374
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 89/268 (33%), Gaps = 43/268 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G++A L+ ++ D++ LP R + QG IL +++ + +DT
Sbjct: 55 SHMGQVLLRGENAARALETLVPVDIIDLPLGTQRYAMFTDAQGGILDDLMVANLGDDTLY 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + +D + L + + IE +L+ + + S
Sbjct: 115 LVVNAACKDQDLAHLQKH-IGEQCQIESLFEERALLALQGPKAAEVLARLAPEVSKMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L E A + LR+
Sbjct: 174 QVARVRLLGSECIVSRSGYTGEDGFEISVAVDQAEALARSLLAEAEVEAIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +T +L+ ++ + G + G E V Q + + RKR
Sbjct: 234 EAGLCLYGHDMSSATTPIEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVG 293
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ G+ I+ D IG +
Sbjct: 294 LLPQERVPVREGAEIVDADGTVIGQVSS 321
>gi|319892522|ref|YP_004149397.1| Aminomethyltransferase / glycine cleavage system T protein
[Staphylococcus pseudintermedius HKU10-03]
gi|317162218|gb|ADV05761.1| Aminomethyltransferase / glycine cleavage system T protein
[Staphylococcus pseudintermedius HKU10-03]
Length = 363
Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 94/295 (31%), Gaps = 55/295 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A +Q +++ D L A+ +A+ +G ++ +I ++ E ++
Sbjct: 53 SHMGEIRIEGPEAAHLVQYVLSNDTNQLTLSKAQYTALCNEEGGVIDDLVIYQLGETQYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + D D ++ + R + + + G + + E S +
Sbjct: 113 LVVNAANVDKDYDWIVQHSSRFDATVTNVSDQYGQLALQGPNARRIIQDNVSEDVSEMGM 172
Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148
+ + + LR
Sbjct: 173 FEFKQNVKIFGKNVILSQSGYTGEDGFEIYCDSEDVTTIWDALLSKDVTPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIEEDFIGKSVLQSQKENGAPRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKK 253
+ +P +G I D EIG + A+ + I + + K
Sbjct: 286 VGLRMIDKGIPRTGYTIYDLDGNEIGEVTSGTQSPSTGHAIGMGIIARDAFEMGK 340
>gi|34921597|sp|Q83B06|GCST_COXBU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 363
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 101/307 (32%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G+ A FL+ ++ DV L A + +L PQG ++ ++ ++ +
Sbjct: 50 SHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD I + V I +P ++ + + S DE
Sbjct: 110 RLVVNAATRDKDIAWIKEKGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLE 169
Query: 121 ----------SIADVLLHRTWGHNEKI---------ASDIK--------------TYHEL 147
D+ + RT E A+D+ L
Sbjct: 170 ALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQGVKPCGLGARDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ TD T P + + + +IG+ + + N+ + ++
Sbjct: 230 RLEAGLNLYGTDM-DETTSPLISNLSWTVSWNDADRNFIGRRALEKQLDENVKERLIGLV 288
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ + + + G + A+A+AR+ V K + +
Sbjct: 289 MEEPGILRNHQKVWLTEDGEGIITSGGFSPTLGHAIALARV-PVGEVEKATVERRGKKIP 347
Query: 264 VKASFPH 270
VK P
Sbjct: 348 VKIIKPP 354
>gi|220933176|ref|YP_002510084.1| glycine cleavage system T protein [Halothermothrix orenii H 168]
gi|254797875|sp|B8D1D7|GCST_HALOH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|219994486|gb|ACL71089.1| glycine cleavage system T protein [Halothermothrix orenii H 168]
Length = 357
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 93/301 (30%), Gaps = 57/301 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ LQ I+T +V L + + G I+ L+ + +D ++
Sbjct: 49 SHMGEILVEGPGALESLQKIVTNNVARLKKGQVLYTPMCKDDGGIIDDLLVYCLGQDKYL 108
Query: 67 LEIDRS--------------KRDSLIDKLLFYKLRS-----------NVIIEIQPINGVV 101
+ ++ S +R ++++ Y L + V
Sbjct: 109 MVVNASNIEKDFNWVRDNSNQRTEVVNESDNYALLALQGPNSKKILEKVSSVNLDSLKFY 168
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTY 144
T + + R L + + +K I + +
Sbjct: 169 NFTTG--TLKGAEVLISRTGYTGELGYELYLSPDKAVEVWQALMEAGSDLGLIPAGLGAR 226
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D P +A + + K +IG+ + + + + RK
Sbjct: 227 DTLRLEKGYCLYGNDI-DENTHPLEAGLGWT--VKFDKASFIGKRALLKYKEEGLSRKLV 283
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
+P G PI + +IG + + R DK G ++T
Sbjct: 284 GFKLKGRGIPRHGYPIKDNGDQIGVVTSGSMSPTLSEGIGMGYVRYDKA----TPGESIT 339
Query: 259 V 259
+
Sbjct: 340 I 340
>gi|150389164|ref|YP_001319213.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus
metalliredigens QYMF]
gi|166989722|sp|A6TMY6|GCST_ALKMQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149949026|gb|ABR47554.1| glycine cleavage system T protein [Alkaliphilus metalliredigens
QYMF]
Length = 369
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 100/313 (31%), Gaps = 58/313 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK A+ F+Q +IT D + S + G ++ L+ K EED F
Sbjct: 52 SHMGEVEIKGKDALNFVQYLITNDASQMEKNQIIYSFMCYENGGVVDDLLVYKFEEDYFY 111
Query: 67 LEIDRS-------------------------------------------KRDSLIDKLLF 83
L I+ ++ + +L F
Sbjct: 112 LVINAGNIEKDYEWMLKQSTAYDVEVNNISNDVSELALQGPKAEKILQKLTETDLSQLQF 171
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIK 142
+ L+ +V I+ +N ++ +++ ++ G + + +
Sbjct: 172 FYLQRDVTID--GVNCLISRTGYTGEDGFEIYVNPSDAVQLWEKLLEVGQEDGLKPIGLG 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201
LR + + I P +A + L K ++G++ + + + R
Sbjct: 230 ARDTLRFEAALPLYGHEI-NRDITPLEAGFGF--AVKLKKEVDFLGKKALIEQKEAGLTR 286
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
K +P S + +IG + LA+ ID + +
Sbjct: 287 KLVGFEMKDRGIPRSDYEVYHQGEKIGFVTTGYFSPTLKRNIGLAL--IDAKYAELGNEV 344
Query: 256 ALTVHGVRVKASF 268
+ + +VKA
Sbjct: 345 DILIRKKQVKAEL 357
>gi|16800453|ref|NP_470721.1| glycine cleavage system aminomethyltransferase T [Listeria innocua
Clip11262]
gi|24636862|sp|Q92C06|GCST_LISIN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|16413858|emb|CAC96616.1| lin1385 [Listeria innocua Clip11262]
Length = 362
Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRS--------------------KRDSLIDKLLFY-----KLRSNVIIEIQPINGVV 101
L ++ + S +L K+ S + + +
Sbjct: 112 LVVNAANTEKDYEWMVQNIVGDVTVKNASSEFGQLALQGPNAEKILSKLT-DADLSSISF 170
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELR 148
+ ++ + I R + + + LR
Sbjct: 171 FGFIEDADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILAEGVAPIGLGARDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ + + I P +A ++ + L K +IG++ + + + + RK I
Sbjct: 231 LEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKQALIKQKEAGLTRKLVGIE 287
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+P P+ +D EIG + LA+ ID + + + + +
Sbjct: 288 LIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIGLAL--IDTAYTELDQELEVGIRN 345
Query: 262 VRVKASF 268
+VKA
Sbjct: 346 KKVKAKV 352
>gi|302346458|ref|YP_003814756.1| aminomethyltransferase [Prevotella melaninogenica ATCC 25845]
gi|302150470|gb|ADK96731.1| aminomethyltransferase [Prevotella melaninogenica ATCC 25845]
Length = 361
Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 86/269 (31%), Gaps = 52/269 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A F+ I T DV L I P G ++ I K+++ ++
Sbjct: 51 SHMGEVIVSGPEADKFINHIFTNDVNGLAAGKVLYGMICYPDGGVVDDTCICKLDDHLYL 110
Query: 67 LEIDRS-----------------------------------KRDSLI--------DKLLF 83
+ I+ S K +S++ +L F
Sbjct: 111 MTINASNIDKDVAWIEQNAEGFDVIIENKSEAYGQLAIQGPKAESMLEDVLGLACKELKF 170
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y+++ ++ +V + + + + +
Sbjct: 171 YEVKR---LQQDGTEVIVSRTGYTGEDGFEVYGTPEYIVK---IWDKLIEAGVKPCGLGC 224
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G+ + I P A + + + K +IG+E + + + + ++
Sbjct: 225 RDTLRFEVGMPLYGNEL-SDKITPVMAGLSMF--VKFDKEEFIGKEALLKQKTEGVSQRL 281
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232
I + +P G +L D +E+G +
Sbjct: 282 RGIELDDNAIPRHGYKVLKDGVEVGEVTT 310
>gi|323464376|gb|ADX76529.1| glycine cleavage system T protein [Staphylococcus pseudintermedius
ED99]
Length = 363
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 94/295 (31%), Gaps = 55/295 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A +Q +++ D L A+ +A+ +G ++ +I ++ E ++
Sbjct: 53 SHMGEIRIEGPEAAHLVQYVLSNDTNQLTLSKAQYTALCNEEGGVIDDLVIYQLGETQYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + D D ++ + R + + + G + + E S +
Sbjct: 113 LVVNAANVDKDYDWIVQHSSRFDATVTNVSDQYGQLALQGPNARRIIQDNVSEDVSEMGM 172
Query: 126 L-------------------------------------LHRTWGHNEKIASDIKTYHELR 148
+ + + LR
Sbjct: 173 FEFKQNVKIFGKNVILSQSGYTGEDGFEIYCDSEDVTTIWDALLSKDVTPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + R+
Sbjct: 233 LEAGLPLHGQDL-SESITPYE------GGIAFAAKPLIEEDFIGKSVLQSQKENGAPRRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG----KKALAIARIDKVDHAIKK 253
+ +P +G I D EIG + A+ + I + + K
Sbjct: 286 VGLRMIDKGIPRTGYTIYDLDGNEIGEVTSGTQSPSTGHAIGMGIIVRDAFEMGK 340
>gi|282877755|ref|ZP_06286568.1| aminomethyltransferase [Prevotella buccalis ATCC 35310]
gi|281300071|gb|EFA92427.1| aminomethyltransferase [Prevotella buccalis ATCC 35310]
Length = 364
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 59/274 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A ++ I T DV P +L P G + L+ K+ E+ F L + +
Sbjct: 58 ITGADAERYVNHIFTNDVAGAPINQVFYGMMLYPDGGTVDDLLVYKMGENEFFLVFNAAN 117
Query: 74 RDSLIDKLLFYKLRS-----NVIIE-IQPINGVVLSWNQEHTF----------------- 110
D + +R +V I+ G + E
Sbjct: 118 IDKDVAW-----MRENAEGFDVTIDHCSDYYGQLAVQGPEAEAVMKEVLHLDCKDLQFYT 172
Query: 111 ------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------L 147
+ I R +G + I I T+ L
Sbjct: 173 AKTVDVDGENVIISRTGYTGEDGFEIYGSHAYI---INTWDALMASKRCVPCGLGCRDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G+ + + I P A + + L K +IG+E + + + + ++ +
Sbjct: 230 RFEVGLPLYGNEL-SAEISPVMAGLSMFC--KLDKEEFIGKEAIVKQKEEGVKQRVIGLE 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+P G +L D ++G + G A+++
Sbjct: 287 LQEKAIPRHGYAVLRDGKQVGVITT--GYHAISV 318
>gi|76803017|ref|YP_331112.1| glycine cleavage system aminomethyltransferase T [Natronomonas
pharaonis DSM 2160]
gi|121698044|sp|Q3IN28|GCST_NATPD RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|76558882|emb|CAI50478.1| aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
Length = 358
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 97/291 (33%), Gaps = 49/291 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A + T DV +L A + I G +L ++ ++ +
Sbjct: 51 SHMGEIEVSGPDAAALTNRLTTNDVASLAPGEATYAGITDDDGVLLDDTVVYRLPDGATY 110
Query: 67 LEIDRSKRDSLI-DKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFID------ 117
L + + D L+ ++ + R + ++ + +++ S +D
Sbjct: 111 LFVPNAGNDELMAERWRSFADRWDLAATVDNATDDYAMVALQGPDALELLSSLDVDVFDL 170
Query: 118 ERFSIA-------DVLLHRTWGHNE-------KIASDIKTY-------------HELRIN 150
RF A D L+ RT E + A+ + LR+
Sbjct: 171 SRFEAAERTVAGVDCLVSRTGYTGEDGVELLFETAAAETVWSALDCQPCGLGARDTLRLE 230
Query: 151 HGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
G + +F P T P++A + G ++ G ++G + ++ + + +
Sbjct: 231 AGFLLGGNEFDPETNPRTPYEANI----GFAVDLGTEFVGSDALAAQREAGPDERLVGLR 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
+ G I+ +G + AL ++ + +
Sbjct: 287 LQDRGIARHGHDIVAAGDVVGEVTSGTMSPTLGAAIALGYVPVEYTEPGTE 337
>gi|315125640|ref|YP_004067643.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas
sp. SM9913]
gi|315014153|gb|ADT67491.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas
sp. SM9913]
Length = 360
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 99/290 (34%), Gaps = 47/290 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ A FL+ ++ DV L A + +L QG ++ +I E +
Sbjct: 50 SHMTIVDIQGEQAQAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYYFSETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + R+ + L K+ S+ V + +P ++ + ++ A
Sbjct: 110 RLVVNSATREKDLAHLA--KVSSDFAVTVTERPEFAMIAVQGPNARAKTAQVLNADQQAA 167
Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147
L + + + L
Sbjct: 168 VEGMKPFFGVQAGDLFIATTGYTGEDGYEIVVPNEQAADLWQQLLDAGVAPAGLGARDTL 227
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D ++ P A M +IG++V+ + + K+ +I
Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTHKQVGLI 286
Query: 208 TGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKK 253
+ SGS ++ D E GT +G ++A+AR+ + +
Sbjct: 287 LEEKGVLRSGSKVIVDGGEGVITSGTFSPTLG-YSVALARVPRSTGDTAQ 335
>gi|330962176|gb|EGH62436.1| glycine cleavage system T protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 374
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+ ++ D++ LP + R + G IL +++ + +
Sbjct: 55 SHMGQIRLGGAGAAKALETLVPVDIIDLPVGMQRYAMFTNESGGILDDLMVANLGNGQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L + L IE +L+ + + + +
Sbjct: 115 LVVNAACKEQDLAHLRQH-LAGQCTIEPLFEERALLALQGPQAVTVLARLAPEVASMTFM 173
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 174 QFASVTLLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T +L+ ++ + G + G E V Q + +KR
Sbjct: 234 EAGLCLYGHDMDTETSPIQASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVNKKRVG 293
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ I+ + D IGT+ G LA+ ++ A+ +
Sbjct: 294 LLPQERTPVREGTQIVDEQDSVIGTVCS--GGFGPSLGGPLAMGYLESQYTALDTPVWAM 351
Query: 259 VHGVRV 264
V G +V
Sbjct: 352 VRGKKV 357
>gi|170723393|ref|YP_001751081.1| glycine cleavage system T protein [Pseudomonas putida W619]
gi|169761396|gb|ACA74712.1| glycine cleavage system T protein [Pseudomonas putida W619]
Length = 373
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 51/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + GK+A L++++ D++ LP + R + QG IL +++ + +DT
Sbjct: 54 SHMGQIILRGKNAAQALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + ++ + L + ++ +Q V + + +F+
Sbjct: 114 LVVNAACKEQDLAHLQQHIGDRCQIQPLFEERALLALQGPAAVTVLARLAPEVAGMTFMQ 173
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R A+ L R E + LR+
Sbjct: 174 LRPVSLLGEDCFVSRSGYTGEDGYEISVPAKAAEALARRLLAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D +T P +A + + G + G +VV Q + RKR
Sbjct: 234 AGLCLYGHDMDTATT-PVEASLLWAVSKVRRADGARAGGFPGADVVFAQQQAGVARKRVG 292
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ I+ D +G + A+ I+ A+ +
Sbjct: 293 LLPQERTPVREGAEIVDASDKPVGKVSSGGFGPTLGAPVAMGYVEIEH--GALDTSLFAL 350
Query: 259 VHGVRVKASF 268
V G +V
Sbjct: 351 VRGKKVALKV 360
>gi|322372078|ref|ZP_08046620.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haladaptatus
paucihalophilus DX253]
gi|320548500|gb|EFW90172.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haladaptatus
paucihalophilus DX253]
Length = 836
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 100/301 (33%), Gaps = 59/301 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
L++ + I+V G + FLQ +++ D+ + R + +L G IL +S+++E
Sbjct: 511 LYDLTSFTAIEVRGSGSERFLQGLLSNDID-VSPGRVRYTTMLNEDGGILADLTVSRLDE 569
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP------------------INGVVLSW 104
D F++ + + + + +E+ + G+V +
Sbjct: 570 DRFLILTGGGSSGTTQGRWIRDHAPDDGTVEVIDRTSARCGLGVWGPNARKTLEGLVETD 629
Query: 105 NQEHTFSNSSFIDE----------RFSIADVLLHRTWGHNE-----------------KI 137
F S + R S L + E +
Sbjct: 630 ISHDAFPFFSCQETYVGGVPVTMLRVSFVGELGWELYAPQEYGAQLWDAVWDAGEEHGVL 689
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
A T + + + G TD P P++A + + +IG+E ++ +
Sbjct: 690 AMGDATLNSMSMEKGFRLWGTDISPE-YNPYEANLSFAVDMETD---FIGKEALAEAKES 745
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDH 249
I +R + +T + + +G PI+ D +G + A A D D
Sbjct: 746 G-IERRLVPVTLDEPGAVVDTGHPIVDGDEILGYTTRADYGYTIDAGIAYAYLPTDYTDA 804
Query: 250 A 250
Sbjct: 805 G 805
>gi|14590974|ref|NP_143049.1| glycine cleavage system aminomethyltransferase T [Pyrococcus
horikoshii OT3]
gi|56554253|pdb|1V5V|A Chain A, Crystal Structure Of A Component Of Glycine Cleavage
System: T-Protein From Pyrococcus Horikoshii Ot3 At 1.5
A Resolution
gi|56554254|pdb|1V5V|B Chain B, Crystal Structure Of A Component Of Glycine Cleavage
System: T-Protein From Pyrococcus Horikoshii Ot3 At 1.5
A Resolution
gi|3257563|dbj|BAA30246.1| 401aa long hypothetical aminomethyltransferase [Pyrococcus
horikoshii OT3]
Length = 401
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ + T D+ P + +L +G I L+ + + ++
Sbjct: 53 SHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 112
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117
+ D + L F KL + ++ I + + + F ID
Sbjct: 113 MICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAKDLFGID 172
Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145
R+ D + + E D YH
Sbjct: 173 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 232
Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177
LR+ G + + P A ++
Sbjct: 233 RILEEGKKYGIKPCGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 290
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234
I K +IG++ + + + R + RK +P G + + IG +
Sbjct: 291 IYWDKD-FIGKDALLKQKERGVGRKLVHFKMIDKGIPREGYKVYANGEMIGEVTSGTLSP 349
Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + I+ + + + P +Y
Sbjct: 350 LLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFY 390
>gi|291301092|ref|YP_003512370.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM
44728]
gi|290570312|gb|ADD43277.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM
44728]
Length = 410
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 45/306 (14%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS++ + + G L +T DV L + + G ++ ++ + + D+
Sbjct: 24 LSHKGKLVISGSDPAHVLNRCLTNDVHHLTSPGKTQYTLACDDDGGVIADGMLYRFDRDS 83
Query: 65 F--------ILEIDRSKRDSLIDKLLFYKLR------------SNVIIEIQPING--VVL 102
F L+ + + D++ + + V + + +
Sbjct: 84 FMMFPSGAGWLDFAKRLDAEVGDEITIGVIHDSHGILSLQGPEAAVTLRRLGLAAPQEYM 143
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRI 149
++ +SFI R A N IA+ ++ LR+
Sbjct: 144 FFDISQAEWGNSFI-CRTDFAGQPGFDIIATNPVIAAMWDELLDAGVTPCGLRARDSLRL 202
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G TDF + +A + I K + G+E + + R+ +
Sbjct: 203 EAGNALHGTDF-NEHVTAIEARLAW--AIGWNKRQFWGKEALEAQRTTGTQRRIFGLTAT 259
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA-IKKGMALTVHGVRV 264
+ +G+ I ++GT+ K +A+A + + A + + T V
Sbjct: 260 SPATLETGATIYDGQQQVGTITSACHSPTLNKPIALALFEPIYQAGTELQVDTTTGRVAA 319
Query: 265 KASFPH 270
+ P
Sbjct: 320 TVTKPP 325
>gi|59802611|sp|O58888|GCST_PYRHO RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
Length = 398
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ + T D+ P + +L +G I L+ + + ++
Sbjct: 50 SHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 109
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117
+ D + L F KL + ++ I + + + F ID
Sbjct: 110 MICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAKDLFGID 169
Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145
R+ D + + E D YH
Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 229
Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177
LR+ G + + P A ++
Sbjct: 230 RILEEGKKYGIKPCGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234
I K +IG++ + + + R + RK +P G + + IG +
Sbjct: 288 IYWDKD-FIGKDALLKQKERGVGRKLVHFKMIDKGIPREGYKVYANGEMIGEVTSGTLSP 346
Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + I+ + + + P +Y
Sbjct: 347 LLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFY 387
>gi|260459623|ref|ZP_05807877.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259034425|gb|EEW35682.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 819
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 82/287 (28%), Gaps = 54/287 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + D+ + + +L +G I +S++ + +
Sbjct: 494 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIVYTQMLNKRGGIESDLTVSRLSDTAY 552
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVV----------------------- 101
L + + + L + V+I ++ V+
Sbjct: 553 FLVVPGATLQRDLAWLRRHVGEEFVVITDVTAAESVLCLMGPNARKLIQNVSPNDFSNEN 612
Query: 102 --LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142
QE R + L + ++ A +
Sbjct: 613 NPFGTFQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEAIEEAGTDVGLKLCGLH 672
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T RI D +A + + KG +IG++ V R + + R+
Sbjct: 673 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTAKGDFIGRDAVLRKKEAGLSRR 729
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+ L IL D +G + G L
Sbjct: 730 LVQFRLKDPQPLLFHNEAILRDGKIVGPITSGNYGHHLGGAIGLGYV 776
>gi|91070613|gb|ABE11512.1| conserved hypothetical protein [uncultured Prochlorococcus marinus
clone HOT0M-8G12]
Length = 278
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 36/257 (14%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70
+ GK A FL I T+++L + LTP G + L+ + + + ILE +
Sbjct: 17 SITGKDARKFLNGITTSNILD-SENKVIKTCWLTPNGVLRSLIEIIFLERNLEVIILEGN 75
Query: 71 RSKRDSLIDKLLFYKLRSNVIIE-------IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
++ + +K++F +V + IQ I+ + F + D+ F I
Sbjct: 76 TNEIINYFNKIIFPV--DDVFLSEPFLINRIQEIDEFSSWRTNQPIFFKTE--DKEFEIY 131
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
L+ I +D+K + +IN I + P + + L I KG
Sbjct: 132 KNKLNLL------IPNDLKLW---KINQAIPSLGMEI-NGKNNPLELGLQDL--IDFNKG 179
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL------TDDIEIGTLGV----V 233
CY+GQE +S+I++ + +++ D DI +G +
Sbjct: 180 CYLGQETMSKIKNVSSLKQEIRTWKSLDSNLNLDVEDKNLYINSAKDISVGKITSFFKLD 239
Query: 234 VGKKALAIARIDKVDHA 250
K LA+ + ++
Sbjct: 240 SQIKGLAMIKRKYLEEG 256
>gi|330829177|ref|YP_004392129.1| glycine cleavage system aminomethyltransferase T [Aeromonas veronii
B565]
gi|328804313|gb|AEB49512.1| glycine cleavage system aminomethyltransferase T [Aeromonas veronii
B565]
Length = 365
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 104/309 (33%), Gaps = 47/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FLQ ++ DV L A S +L P+G ++ + + + +
Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTAPGKALYSGMLNPEGGVIDDLITYYLGDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DERFSIA 123
L ++ + R+ + + + + ++ + +P ++ ++ + +R ++
Sbjct: 110 RLVVNSATREKDLAWIRHHAIDFDITVTERPELAMIAVQGPNAKVKAAAVLSAAQRTAVV 169
Query: 124 DVL----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + N + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACELWQALLDNGVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D +I P A M + +IG++V+ + K ++
Sbjct: 230 EAGMNLYGQDM-DESISPLAANMAWTIAWEPSDRNFIGRDVLEAQKAAGNQPKLVGLVME 288
Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ +G P+ + G + ++A+AR+ + + + +
Sbjct: 289 EKGVLRAGMPVTFTAANGEKREGVITSGSFSPTLGYSIALARVPRDIGEL-AEVEIRKKL 347
Query: 262 VRVKASFPH 270
V VK + P
Sbjct: 348 VTVKVTKPA 356
>gi|269218168|ref|ZP_06162022.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212296|gb|EEZ78636.1| folate-binding protein YgfZ [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 531
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN-GIS 179
+ L + + + R+ + + PH+ +D L +
Sbjct: 317 ADKGGKLLAALERAGAAPAGMLAWEAARVAGWRPRVAFE-VDERALPHE--LDWLRTAVH 373
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGT---DDLPPSGSPILTDDIEIGTLGVVV-- 234
L KGCY GQE V+++ + +R + + D+LP +G P+ + ++G + V
Sbjct: 374 LNKGCYRGQETVAKLVNLGRPPRRLVELFLEGPVDELPRTGDPVTSGGRKVGVVASAVRH 433
Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVH 260
G ALA+ R A+ L V
Sbjct: 434 PEDGPVALALVR-----RALDPEAVLDVG 457
Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G +L ++++ + + + + + +P G I + + D L D
Sbjct: 109 VVAVRGADRRRWLHSLLSQALADIAPGASTEALLFSPSGHIENGAFVY-DDGDVAWLLCD 167
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
R D L V + ++ + ++ + + A
Sbjct: 168 RGDGRRWADFLNSMVFTMRVEVNLREDLLTIGAFVPVGASRRAEAAESPSEGAG 221
>gi|113475696|ref|YP_721757.1| glycine cleavage system aminomethyltransferase T [Trichodesmium
erythraeum IMS101]
gi|110166744|gb|ABG51284.1| aminomethyltransferase [Trichodesmium erythraeum IMS101]
Length = 381
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 101/296 (34%), Gaps = 52/296 (17%)
Query: 24 QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILEIDRSKRDS 76
Q ++ +D+ L A+ + +L QG I+ F+ + +D F++ +K +
Sbjct: 77 QYLVPSDLSGLEPGKAQYTVLLNSQGGIIDDFIFYRQSDDPLTNEARGFMIVNAATKAND 136
Query: 77 ---LIDKLLFYKLR------SNVIIEIQPINGV---------------------VLSWNQ 106
++ L ++ V++ +Q + + ++
Sbjct: 137 KGWILSHLENSGVKFQDISEEKVLLAVQGPDAESYIQQFVKENLASIGFFGHADITVLDK 196
Query: 107 EHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
+ + + E V L R+ + + LR+ + D
Sbjct: 197 PGFIARTGYTGEDGFEIMVDPPVGVELWRSLLNAGVTPCGLGARDTLRLEAAMALYGQDI 256
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
P +A + L + KG +I +EV+ + + ++ + + G P+
Sbjct: 257 -DIKTTPLEAGLSWLVHLD-KKGEFIAREVLETQKREGVSKRLVGLEMLDRGIARHGYPV 314
Query: 221 LTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG---VRVKASFP 269
L+D +G + KA+A+A + K + + + + + G + P
Sbjct: 315 LSDGKVVGEVTSGTKSPTLGKAIALAYVPKKLAKVGQKLEVEIRGKNYAAIVVKRP 370
>gi|282880069|ref|ZP_06288789.1| aminomethyltransferase [Prevotella timonensis CRIS 5C-B1]
gi|281305942|gb|EFA97982.1| aminomethyltransferase [Prevotella timonensis CRIS 5C-B1]
Length = 360
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + GK A ++ I T DV P +L P G + L+ K+ E+ F
Sbjct: 51 SHMGEVYITGKDAEKYVNYIFTNDVTNAPLNSIFYGMMLYPDGGTVDDLLVYKMGENEFF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------- 111
L I+ + D ++ + + +V I+ L+ S
Sbjct: 111 LVINAANTDKDVEWIRQHAEGYDVTIDHCSDYYSQLAIQGPEAESVVEEVLHLSCKDLAF 170
Query: 112 ---------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELR 148
I R +G I LR
Sbjct: 171 YEAETIDVNGEQIIVSRTGYTGEDGFEIYGSQAYIVRAWDALMESKRCTPCGLGCRDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + I P + + + L K +IG+E +++ + +K +
Sbjct: 231 FEAGLPLYGMEL-SKDITPVMSGLSMFC--KLDKPEFIGKEAIAKQKEEKPKQKVIGLEL 287
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMALTVHGV 262
+P G P++ D ++G + +L A+ ++ + + +
Sbjct: 288 EGKAIPRHGYPVMKDGQQVGIITTGYHSISLDKSLAFALVDLEHSKLGTELEVQIRKKTF 347
Query: 263 RVKASF 268
Sbjct: 348 PCVVVK 353
>gi|119511353|ref|ZP_01630466.1| aminomethyltransferase [Nodularia spumigena CCY9414]
gi|119463975|gb|EAW44899.1| aminomethyltransferase [Nodularia spumigena CCY9414]
Length = 378
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 44/261 (16%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-----FILEIDRSKRDS- 76
LQ ++ +D+ L A+ + +L PQG I+ ++ E+T ++ ++ S
Sbjct: 75 LQRLVPSDLNRLQPGQAQYTVLLNPQGGIIDDIIVYYQGENTTGLQQAVIVVNASTTAKD 134
Query: 77 ---LIDKLLFYKL------RSNVIIEIQPINGV---------------VLSWNQEHTFSN 112
L+ +L ++ V+I +Q V Q
Sbjct: 135 KAWLLQQLDLNQVEFQDLSPEKVLIAVQGTKAVKYLQPLVKEDLEPIKAFGHLQASILGK 194
Query: 113 SSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
+FI V L + LR+ + D
Sbjct: 195 PAFIARTGYTGEDGFELMLDPDVGVELWEKLHQAGVTPCGLGARDTLRLEAAMALYGQDI 254
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI 220
T P +A + + + TKG +IG+EV+++ + + ++ + ++ G PI
Sbjct: 255 -DDTTTPLEAGLSWVVHLD-TKGDFIGREVLAQQKADGVQKRLIGLQMSGRNIARHGYPI 312
Query: 221 LTDDIEIGTLGVVVGKKALAI 241
L+ D +G + L
Sbjct: 313 LSADEVVGEITSGTLSPTLGY 333
>gi|332159412|ref|YP_004424691.1| glycine cleavage system aminomethyltransferase T [Pyrococcus sp.
NA2]
gi|331034875|gb|AEC52687.1| glycine cleavage system aminomethyltransferase T [Pyrococcus sp.
NA2]
Length = 398
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 57/341 (16%), Positives = 100/341 (29%), Gaps = 83/341 (24%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ + T DV P + +L +G I LI + + ++
Sbjct: 50 SHMGEILFRGKDALKFLQYVTTNDVSKPPAISGIYTLVLNERGAIKDETLIFNLGNNEYL 109
Query: 67 LEIDRSKRDSL---IDKLL-----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117
+ D + L L F KL + ++ I + + + F ID
Sbjct: 110 MICDADAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLAMDLFGID 169
Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145
R+ D + + E D YH
Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGKPEKALHVWE 229
Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177
LR+ G + + P A ++
Sbjct: 230 TILEAGKKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234
I K +IG+E + + + R + RK +P G + + IG +
Sbjct: 288 IYWDKD-FIGKEALLKQKERGLGRKIVHFKMVDKGIPREGYKVYANGELIGEVTSGTLSP 346
Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVR---VKASFP 269
+A + + I+ + + V G R V + P
Sbjct: 347 LLNVGIGIAFVKEEYAKPGIE--IEIDVRGARKKAVTVTPP 385
>gi|332798356|ref|YP_004459855.1| Aminomethyltransferase [Tepidanaerobacter sp. Re1]
gi|332696091|gb|AEE90548.1| Aminomethyltransferase [Tepidanaerobacter sp. Re1]
Length = 354
Score = 68.7 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 112/308 (36%), Gaps = 57/308 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G++A FL I+T ++ + A+ + + G + ++ K+ ++
Sbjct: 50 SHMGEILVKGENAGDFLNDILTNNIHKIKEGQAQYTIMTYDDGGTVDDLMVYKLSLTRYL 109
Query: 67 LEIDRSKRDSLIDKLL--------------FYKLRSNVIIEIQPIN--GVVLSWNQEHTF 110
L ++ + +D + + Y L I IQ G V E
Sbjct: 110 LVVNAANKDKDFEHIKSLAPADVVVEDVSDDYGL-----IAIQGPESAGFVKELFGEIQL 164
Query: 111 SNSSFIDERFSIADVLLHRT----------WGHNE-------------KIASDIKTYHEL 147
+F F ++L RT +G E I + L
Sbjct: 165 KPFNFRTIEFDSDSLILSRTGYTGGEGFEVYGSPEMTRRLFCKAVDFGVIPCGLGARDTL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G+ + P I P +A + I L+K + G++V+ R Q R+R + +
Sbjct: 225 RFEAGLPLYGHELGPD-ITPVEAGLSRF--IDLSKP-FKGRDVL-RTQSEQRDRRRLIGL 279
Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVH 260
D +P P+ D ++G + V A+A+ +I +D A K + +
Sbjct: 280 KLLDRGVPRPDYPVYYDGKQVGKVTSGGFAPYVKEYLAMALVKI-PLDDANDKLFEIEIR 338
Query: 261 GVRVKASF 268
G + +A
Sbjct: 339 GKKHRAEK 346
>gi|217076311|ref|YP_002334027.1| glycine cleavage system aminomethyltransferase T [Thermosipho
africanus TCF52B]
gi|217036164|gb|ACJ74686.1| glycine cleavage system T protein [Thermosipho africanus TCF52B]
Length = 436
Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 48/280 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK + F+ +IT D L +A+ G + L KI ++
Sbjct: 122 SHMGQVLVEGKDSTNFVNYLITNDFKNLSNGEIVYTAMCNENGGFIDDLLAYKISDEKAF 181
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
L I+ + + + + L +V +E + + +++ +
Sbjct: 182 LVINAANIEKDFEWMKNVALNFDVKLENKSDDYALIAIQGPNAQKTLQKLTDIDLESIGY 241
Query: 113 SSFIDERFSIADVLLHRTWGHNEK------------------------IASDIKTYHELR 148
+F+ + + L+ RT E + + LR
Sbjct: 242 YTFVFGKVKDVEALISRTGYTGEDGFEIYTTDKDGIVKIWEELLNLGVKPAGLGARDTLR 301
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ ++ D T+ P +A + + K ++G+ + + + R+
Sbjct: 302 LEASLLLYGNDM-DETVTPLEAGIKW--AVKFDKE-FVGKAALEKQLEEGLKRRLKGFKL 357
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+ G + D EIG + +A+
Sbjct: 358 IDKGIARHGYKVFKDGREIGVVTSGTFSPTLDESIGMALI 397
>gi|312080836|ref|XP_003142770.1| hypothetical protein LOAG_07189 [Loa loa]
gi|307762068|gb|EFO21302.1| hypothetical protein LOAG_07189 [Loa loa]
Length = 75
Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
L ++ ++ GK FLQA+IT D+ L A+ + +L +G+I+ ++ +
Sbjct: 17 LYNLRHRGLLRAKGKEVFQFLQALITNDIRRLADGRAQYALLLNSRGRIVEDLILYR 73
>gi|307189253|gb|EFN73696.1| Aminomethyltransferase, mitochondrial [Camponotus floridanus]
Length = 453
Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 49/267 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK A +L+++ T D+ L A + +G IL +I+K +ED + L +
Sbjct: 135 RVSGKDAGEYLESLTTCDLKNLNKGAATLTIFTNEKGGILDDLIITKDDEDKYFLVSNAG 194
Query: 73 KRDS----LIDKLLFYK-----------------------------LRSNVIIEIQPING 99
+RD L+++ +K L+S V ++Q +
Sbjct: 195 RRDEDSQLLLERQKDFKEVGKNVFVDFLEPLQQGLIALQGPTAATVLQSLVNFDLQTLKF 254
Query: 100 VVLSWNQ-----------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ + +T + I A L+ + + + + + LR
Sbjct: 255 MYSVKTEILGSRIRISRCGYTGEDGFEISVPAKDAINLVEKLLENPDVKLAGLGARDSLR 314
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIG-QEVVSRIQHRNIIRKRPMI 206
+ G+ D +T P +A + L + + G Q+++S+I+ + +KR +
Sbjct: 315 LEAGLCLYGNDIDENTT-PIEAALTWLVAKRRRTEANFPGAQQILSQIK-TGVTKKRVGL 372
Query: 207 ITGTDDLPPSGSPILT-DDIEIGTLGV 232
+ G G+ ILT + +G++
Sbjct: 373 LLGQGPPARQGASILTPEGERVGSVTS 399
>gi|160903341|ref|YP_001568922.1| glycine cleavage system aminomethyltransferase T [Petrotoga mobilis
SJ95]
gi|160360985|gb|ABX32599.1| glycine cleavage system T protein [Petrotoga mobilis SJ95]
Length = 441
Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 100/309 (32%), Gaps = 52/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A F+ +IT +V +P S + G IL L K++E+ +
Sbjct: 124 SHMGELFVQGKDAQKFVNYLITNNVEKIPIGKIVYSPMCNEDGGILDDLLAYKLDEEKIL 183
Query: 67 LEIDRSK------------------------------------RDSLIDKLLFYKLRS-- 88
L ++ S +D L L L S
Sbjct: 184 LVVNASNTQKDFDWVRKQSSSFNVEVINKSDEYCQIAFQGPKSQDQLQKYLKDIDLDSIE 243
Query: 89 ----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV-LLHRTWGHNEKIASDIKT 143
+ + ++ ++ ++ ++ L + + + +
Sbjct: 244 YYSFKI-LGLEGEEVILSRTGYTGEDGFELYLSPAIAVKVWDRLIQLAKEVDGKPCGLGS 302
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR ++ D +T P +A + + K +IG+E + + + I RK
Sbjct: 303 RDTLRFEPKMLLYGNDMDENTT-PLEAGLSWT--VDFNKE-FIGKEALLKQKEEGIKRKL 358
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+ G I D+ IG + V K LA+ + K ++ +++
Sbjct: 359 VGMEVHDKMPVRHGYEIFKDNENIGFVTSGVKSPTLGKNLALGYVSKEFSKLETIVSIKA 418
Query: 260 HGVRVKASF 268
++A
Sbjct: 419 REKLLEAEV 427
>gi|313889012|ref|ZP_07822671.1| glycine cleavage T-protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844998|gb|EFR32400.1| glycine cleavage T-protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 336
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 47/299 (15%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-- 68
+ V GK A FL + D+ + A + +L +GKI+ ++ ++E D F++
Sbjct: 27 VLDVKGKDAADFLDKVFVNDIKNMKDTHALYTTMLNEEGKIIDDVIVFRLEADKFLISTL 86
Query: 69 -IDRSKR-------------DSLIDKLLFYKL---RSN--V-IIEIQPINGVVLSWNQEH 108
ID+ ++ DKL + + +S V I + I+ + +++
Sbjct: 87 YIDKMIEWFDKFKNGSDVEYKNITDKLTMFAIQGPKSKDLVNKIVDKDISDLKFFTIEDN 146
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYHELRINHGIVDPNTDFL 161
+ + + R L + + + EKI K + + I ++ +
Sbjct: 147 SLGDLDLMVARAGFTGELGYELYVESDKKDILEEKIKEAGKEFDLVNITSDVIIGSLPGE 206
Query: 162 PSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ P + +IG+E + + + N+ R D
Sbjct: 207 KGYVLMSDLEGANPLEVGYGWTVAWDSD---FIGKEALLKAK-ENVTRDLFGFELLEDGE 262
Query: 214 PPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G +L D +IG + V + D K + + +
Sbjct: 263 VEAGDEVLLDGKKIGRVTKFTYGYTVEKFIGYCMIEKDAAVEGKKVEIKTKAGSLEARL 321
>gi|220907450|ref|YP_002482761.1| glycine cleavage system T protein [Cyanothece sp. PCC 7425]
gi|219864061|gb|ACL44400.1| glycine cleavage system T protein [Cyanothece sp. PCC 7425]
Length = 375
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 101/310 (32%), Gaps = 53/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65
S+ ++ GK LQ ++ +D+ L +A+ S L +G +L + +E D
Sbjct: 59 SHMGKFRLSGKDLRTHLQPLVPSDLSGLQPGVAKYSVFLNARGGVLDDLIFYVLEADQTG 118
Query: 66 ----ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERF 120
+L ++ + LL + V +E + V+++ + +D
Sbjct: 119 IEQGLLIVNAATTAKDKAWLLHHLETEAVELEDISASNVLIALQGPDAANTLQPLVDVDL 178
Query: 121 SIA------------------------------------DVLLHRTWGHNEKIASDIKTY 144
S+ L R+ + +
Sbjct: 179 SLLKNYTHCSVRLLDTTAWLARTGYTGEDGFEIMVEAATGEALWRSLLDLGVMPCGLGAR 238
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + D + P +A + + +S K +IG+ + + + + R+
Sbjct: 239 DTLRLEAAMPLYGQDI-DDSTTPLEAGLGWV--VSWDKEDFIGKASLIQQKQAGVPRRLV 295
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
+ + G +L D +GT+ ALA + A+ + +A+
Sbjct: 296 GLQMQGRHIARPGYAVLFADQPVGTVTSGSFTPTLAQPIALAYVPPELA--AVGQELAVE 353
Query: 259 VHGVRVKASF 268
+ G A+
Sbjct: 354 IRGKACPATV 363
>gi|94986005|ref|YP_605369.1| glycine cleavage system T protein [Deinococcus geothermalis DSM
11300]
gi|94556286|gb|ABF46200.1| glycine cleavage system T protein [Deinococcus geothermalis DSM
11300]
Length = 374
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 83/280 (29%), Gaps = 53/280 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A FLQ + T DV L A+ + + G ++ + ++ + F+
Sbjct: 74 SHMGEFRVTGPDAEAFLQRVTTNDVTKLKPGRAQYNWLPNESGGLVDDIYVYRVGPEEFL 133
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-NGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + + L Y +V + + G++ + D S
Sbjct: 134 LVVNAANIEKDWAHLQRYASGFDVGLSDESDRWGLLAVQGPQSETLLQPHTDVDLSAKKK 193
Query: 124 -----------DVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
DV L RT E + + LR+
Sbjct: 194 NAYFPATLLGFDVWLARTGYTGEDGFEIFVKAEEAEALWEALLALGLTPAGLGARDTLRL 253
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G +F + P + + ++ V R + R + +
Sbjct: 254 EAGFPLYGHEFA-EDLHPLASSYTWV---------VKDKDHVGRAGMQAAPPVRLIGLAL 303
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243
G P+L + IG + A+A+ R
Sbjct: 304 ERVPVREGYPVLLGNERIGHVTSGTSSPTLGHPIAMALVR 343
>gi|77361390|ref|YP_340965.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas
haloplanktis TAC125]
gi|123587845|sp|Q3IFV9|GCST_PSEHT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|76876301|emb|CAI87523.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudoalteromonas
haloplanktis TAC125]
Length = 360
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 43/288 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ A FLQ ++ DV L A + +L QG ++ +I ++
Sbjct: 50 SHMTIVDIQGEQAQAFLQKLVANDVAKLTVPGKALYTPMLNEQGGVIDDLIIYFFSNTSY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + L V + + G++ ++ + + A
Sbjct: 110 RLVVNSATREKDLAHLAKISADFAVTVTERNEFGMIAVQGPNAKAKTATLLTAEQNAAIE 169
Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149
L + + + LR+
Sbjct: 170 GMKPFFGVQTGDLFIATTGYTGEDGYEIVVPKEQAADLWQQLLDAGVAPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M +IG++V+ + + K+ ++
Sbjct: 230 EAGMNLYGLDM-DESVSPLAANMAWTIAWEPQSRDFIGRDVLVQQRADQSTDKQVGLVLE 288
Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKK 253
+ SGS ++ D E GT +G ++A+AR+ + +
Sbjct: 289 EKGILRSGSKVIVDGGEGVITSGTFSPTLG-YSVALARVPRSTGDTAQ 335
>gi|330469405|ref|YP_004407148.1| glycine cleavage system aminomethyltransferase T [Verrucosispora
maris AB-18-032]
gi|328812376|gb|AEB46548.1| glycine cleavage system aminomethyltransferase T [Verrucosispora
maris AB-18-032]
Length = 374
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 89/315 (28%), Gaps = 61/315 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTF 65
S+ ++V G A F+ A ++ D+ + A+ + G ++ + +D
Sbjct: 63 SHLGKVRVTGPGAAEFVNACLSNDLGRIEPGRAQYTLCCDEATGGVVDDIIAYLYADDHV 122
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ--------------- 106
L + + ++ +L R+ V + + VL+
Sbjct: 123 FLIPNAANTAEVVRRL-----RAAAPPQVTVTDEHEAYAVLAVQGPRSADLLDALGLPTG 177
Query: 107 -------EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTY 144
T R + A +
Sbjct: 178 HEYMSFSPATLDGVELTVCRTGYTGERGYELVVPAADAVAVWDALFAAEPTPQACGLAAR 237
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-R 203
LR G D I P A + K + G++ + + R R
Sbjct: 238 DTLRTEMGYPLHGQDLSLE-ISPVQARTGW--AVGWDKPAFWGRDALLAEKAAGPTRTLR 294
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+ + G +P G + D ++GT+ K+ +A+A ID A+ G L +
Sbjct: 295 GLTVAGRG-IPRPGMAVFHGDTQVGTVTSGTFSPTNKQGIALALIDTA-PALPDGTELQI 352
Query: 260 H----GVRVKASFPH 270
+ P
Sbjct: 353 DIRGRHTPAHLTRPP 367
>gi|72383478|ref|YP_292833.1| hypothetical protein PMN2A_1642 [Prochlorococcus marinus str.
NATL2A]
gi|72003328|gb|AAZ59130.1| conserved hypothetical protein [Prochlorococcus marinus str.
NATL2A]
Length = 282
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 94/279 (33%), Gaps = 40/279 (14%)
Query: 12 IKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEED--TFILE 68
+ + G+ FL TADV L+ +G L L ++ +D ++
Sbjct: 16 LLLKGQGTTSFLHGQTTADVFAQKELDRIFMCCWLSTKG-ALKAVLEIRLSDDMAEIVII 74
Query: 69 IDR--SKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
S RD + V +E I PI ++ +NSS+ D FS
Sbjct: 75 CGEINSIRDGFES-----VIFPADKVKLEVIDPIR------RRQEINNNSSWKDSDFSWI 123
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
D G + + + +I GI + + P++ + + I+L KG
Sbjct: 124 DDNTFSIDGITKYKKATKEELEGWKIRQGIPSFDKEM-NGETNPYELGLA--DTINLDKG 180
Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDD------IEIGTLGVVVG 235
CY+GQE +++ ++ R G +D G + +G + +
Sbjct: 181 CYLGQEAMAKFFRSKSLKYQLRYWEAYGENDNFQIGKKFFNTNKNEGYKKNVGVVTSSIR 240
Query: 236 K-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ + + + +G + P
Sbjct: 241 VDDNFFNGLALIK----KTFLDHDFCFSENGDSITIKKP 275
>gi|325954164|ref|YP_004237824.1| aminomethyltransferase [Weeksella virosa DSM 16922]
gi|323436782|gb|ADX67246.1| Aminomethyltransferase [Weeksella virosa DSM 16922]
Length = 358
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 52/312 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ +I +LQ I++ DV + A+ +A+ +G I+ +I ++ D ++
Sbjct: 49 SHMGQIFVKGEKSIDYLQHILSNDVSKIADGQAQYNAMTNEEGGIVDDLIIYRLAADHWM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
+ ++ S D + Y ++ ++ + + S D S
Sbjct: 109 VVVNASNAGKDWDWMNKYNTFDVELVNESDNRSLLAIQGPKAIEAMQSLTDVDLSSIPFY 168
Query: 122 ---------------------------------IADVLLHRTWGHNEK---IASDIKTYH 145
AD + + E I +
Sbjct: 169 HFVVGKFAGIDNVLISATGYTGSGGFEVYFSNEAADTIWEKVLEAGEGFGIIPCGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P++A + + + +IG + + + + + + RK
Sbjct: 229 TLRLEKGYCLYGNDI-NETTSPYEAGLGWVTKLDTN---FIGSDALKKQKEQGVDRKLVA 284
Query: 206 IITGTDDLPPSGSPILTDDI-EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G ++ D+ +G + LA ID + +
Sbjct: 285 FKMLERGIPRQGYKVVDDNENTVGEVTSGTQSPMLKQGIGLAYVHIDFAKIGTTIRIKIR 344
Query: 259 VHGVRVKASFPH 270
+ +
Sbjct: 345 DKNILAEVVKAP 356
>gi|288958429|ref|YP_003448770.1| aminomethyltransferase [Azospirillum sp. B510]
gi|288910737|dbj|BAI72226.1| aminomethyltransferase [Azospirillum sp. B510]
Length = 370
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 95/304 (31%), Gaps = 45/304 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G L+ ++ D+ L R + L QG IL +++ D
Sbjct: 57 SHMGQVRLTGADPAAVLETLVPGDITGLAQGRMRYTLFLNEQGGILDDLMVTN-GGDHLF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + ++ + L KL V +E+ ++ + F+ E +
Sbjct: 116 LVVNAACKEQDVAHL-REKLAGKVEVELLDDLALMALQGPLAAEVMARFVPEAAGMKFMS 174
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+++ E A + LR+
Sbjct: 175 CLSASFKGVPVILTRSGYTGEDGYEISCDKADAEMIARALLAEAEVEAIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P + ++ L +G + G +++ R R+R I
Sbjct: 235 AGLCLYGHDIDT-TTTPVEGALEWTLPKRRRAEGGFPGYDIIHRQLTGGATRRRVGIQPD 293
Query: 210 TDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ I + IG + +A+ +D A+ + L V G +
Sbjct: 294 GRQPAREHTEIQDANGNRIGEITSGGFGPTAGAPVAMGYVDIAHAALDTPLTLVVRGKPL 353
Query: 265 KASF 268
A
Sbjct: 354 PARV 357
>gi|282856321|ref|ZP_06265601.1| aminomethyltransferase [Pyramidobacter piscolens W5455]
gi|282585824|gb|EFB91112.1| aminomethyltransferase [Pyramidobacter piscolens W5455]
Length = 368
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 52/277 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ +++T DV + + + + TP G ++ L+ + ++ ++
Sbjct: 51 SHMGEVTVVGPKAEAWISSLVTNDVAEMHDGQVQYNIMCTPTGGVVDDLLVYRYNKERYL 110
Query: 67 LEIDRSKRDS----LIDKLL---------FY-------------KLRSNVIIEIQPINGV 100
L I+ + + D L LR V + +
Sbjct: 111 LVINAANVEKDWAWFNDHLTDGVKIENISMQTAEVALQGPNAEAILRKIVDFDPATLE-- 168
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143
+ I R + K A +
Sbjct: 169 FFHFKDPVDVKGIKAIVSRTGYTGEDGFEIYVDWSKGAELWNIVMEAGKDLGLMPIGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202
LR G+ +F T+ P +A + L K G +IGQ V+ + + + RK
Sbjct: 229 RDSLRFEAGLPLCGQEFT-DTLGPLEAGFGFF--VKLDKAGGFIGQPVLKQQKADGLKRK 285
Query: 203 RPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKA 238
+P + D IG + G
Sbjct: 286 IVAAKLIDKGVPRHEMEVADKDGNIIGVVTT--GGYG 320
>gi|226360289|ref|YP_002778067.1| glycine cleavage system aminomethyltransferase T [Rhodococcus
opacus B4]
gi|226238774|dbj|BAH49122.1| aminomethyltransferase [Rhodococcus opacus B4]
Length = 366
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/307 (16%), Positives = 98/307 (31%), Gaps = 50/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + TP G ++ + + D
Sbjct: 54 SHLGKALVRGTGAAAFVNSALTNDLGKIGPGKAQYTLCCTPSGGVIDDLIAYYVSPDEVF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN------------GVVLSWNQEHTFSNSS 114
L + + ++ L V +E Q + V+ + +
Sbjct: 114 LVPNAANTADVVAALTA-AAPDGVTVEDQHRDFGVIAVQGPKSVDVLTALGLPTDIEYMA 172
Query: 115 FIDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHEL 147
F D + V + R+ W +EK+ + + L
Sbjct: 173 FADATWDGVPVRVCRSGYTGEIGFELLPRWEDSEKLFRAAVEQVRARGGQVAGLGARDTL 232
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G + I P +A I TK + G+E ++ + RK I
Sbjct: 233 RTEMGYPLHGHELSLE-ISPLEARCGW--AIGWTKPKFWGRETLADEKASGPARKLWGIK 289
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH--G 261
+ +G +L D IG K +A+A +D + G ++V G
Sbjct: 290 ALDRGVLRAGQTVLRDGEPIGETTSGTFSPTLKVGIALALLDS-GSGVSAGDEISVDVRG 348
Query: 262 VRVKASF 268
++A
Sbjct: 349 RSLRAEV 355
>gi|257056952|ref|YP_003134784.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
gi|256586824|gb|ACU97957.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
Length = 346
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/303 (17%), Positives = 107/303 (35%), Gaps = 53/303 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS I+V G A + Q ++ DV L + S +L +G ++ ++ ED
Sbjct: 39 LSGVRLIEVTGDGATEYAQRVLARDVEYLTDERCMTSLVLDAEGTVV-DQVVVWGREDGL 97
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQE-------------- 107
+LE D L++ L R+ V I + + +
Sbjct: 98 LLESSVGFGDRLLEHL-----RAQAGDDVTITDRTGELALFALEGPYAWGVVGRLIDAEL 152
Query: 108 HTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKT--------------YHELR 148
S +D + +++ RT +G+ +++D Y L
Sbjct: 153 AALPFESVVDTTWDGEEIVFARTGSTAEYGYKVIVSADSAEKLWHKAVAEAAPAGYEALE 212
Query: 149 IN-HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ + P + + + L + +TK ++G++ V ++R +
Sbjct: 213 LAMLEVRQPVVRHEAGSADIVEMGANWL--VDITKEDFLGRDAVL-AAFNAPAKRRTIGF 269
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALTVHGVR 263
+G + +P G+P+ +G + V A L +AR++ A G+ L+V
Sbjct: 270 SGGESVPEPGTPVTIGGERVGEVVHAVRSIALDAPLGLARVEPDVAA--AGLTLSVGDAE 327
Query: 264 VKA 266
V
Sbjct: 328 VTT 330
>gi|292493952|ref|YP_003533094.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloferax
volcanii DS2]
gi|291369403|gb|ADE01633.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloferax
volcanii DS2]
Length = 837
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/320 (14%), Positives = 92/320 (28%), Gaps = 82/320 (25%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A+ FLQ ++T D+ + R SA+L G +L ++++ ++ F+L
Sbjct: 520 IEVSGPGALEFLQGLLTNDMD-VTPGRMRYSAMLNEDGGVLADLTVARLGDERFVLFTGG 578
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118
+L + V E P +G V + +
Sbjct: 579 GSSATLHSR--------WVT-EHAPDDGSVDVTAHVSSRTGIGVFGPDSRKVLSDLVEAD 629
Query: 119 ------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR------ 148
R S A L + E + + +R
Sbjct: 630 LSNDEFPFYSAQETYLGSIPVTMLRLSYAGELGWEIYAPTEY---GSQLWDAIREAGEEY 686
Query: 149 --------------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ G TD P P++A + + ++G+ +
Sbjct: 687 DIAPVGWAALDSTSMEKGFRLWGTDLTPEH-NPYEAGIGFAADLDTD---FVGKAALVAD 742
Query: 195 QHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDK 246
++ + R + IT ++ + +G P+ DD +G + A A +
Sbjct: 743 KNDDSPSDRIVPITLDEEEAVVDAGHPVFVDDEVVGYCCRADYGYTIDAGIAYAYLPEEY 802
Query: 247 VDHAIKKGMALTVHGVRVKA 266
+
Sbjct: 803 ASSGQDVEIRYEGDAHPATV 822
>gi|78189613|ref|YP_379951.1| glycine cleavage system aminomethyltransferase T [Chlorobium
chlorochromatii CaD3]
gi|123579384|sp|Q3AQ17|GCST_CHLCH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78171812|gb|ABB28908.1| aminomethyltransferase [Chlorobium chlorochromatii CaD3]
Length = 366
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 94/272 (34%), Gaps = 52/272 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF
Sbjct: 49 SHMGNFFVKGSRALEFLQFVTTNDLAKVVDGQAQYNLMLYPSGGIVDDLIIYRMSADTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE---------------HTF 110
L ++ S D L + V +E +++
Sbjct: 109 LIVNASNADKDFAWLQQHIDQFEGVTLEDHTERLSLIALQGPLALSILNRLFPSIDGEAL 168
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHELRINHGIVDPNTDF--- 160
+ F F+ DV++ RT EK + I + L + G D
Sbjct: 169 GSFHFCSASFNGFDVIIARTGYTGEKGVEMCVPNEAAIALWEAL-MAAGAADGIQPIGLG 227
Query: 161 -----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRK 202
+ P +A + + + + KG +IG+E + +QH ++
Sbjct: 228 ARDTLRLEMGYSLYGHEINQDTNPLEARLKWV--VKMDKGHFIGKEACEQAMQH---PQR 282
Query: 203 RPMIITGTD-DLPPSGSPILTDDIE-IGTLGV 232
+ + LP G + D + IG +
Sbjct: 283 TVIGFSLEGRALPRQGFTLYNSDRQAIGVVCS 314
>gi|304309777|ref|YP_003809375.1| Glycine cleavage system T protein [gamma proteobacterium HdN1]
gi|301795510|emb|CBL43708.1| Glycine cleavage system T protein [gamma proteobacterium HdN1]
Length = 360
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 45/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A +A+ QG I+ ++ ++ +
Sbjct: 50 SHMTIVDVTGADAKRWLQKLLANDVERLLEPGKALYTAMCNEQGGIIDDLIVYRMAV-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
+ ++ + R+ + + + + I Q ++ + + +
Sbjct: 109 RMVVNCATREKDMAWMQKQLVGFDAQIRHQDQLAIIAVQGPRAVQKTADVLGNAYATAIA 168
Query: 121 --------SIADVLLHRTWGHNE-------KIASDIKTY----------------HELRI 149
+ + + RT E A+ + LR+
Sbjct: 169 QLKTFHGIPVGEWFISRTGYTGEDGLELMLPAAAAESIWRSLLEHGVRPCGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ +D TI P +A M +IG++ + + + R ++
Sbjct: 229 EAGMNLYGSDM-DETISPLEAGMGWTLAWQPEMRRFIGRDALEAQKAAGVARAFTGLVMA 287
Query: 210 TDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + T + GT +G A+A+AR+ + + + + VK
Sbjct: 288 GKGVLRGHQKVRTSLGEGETTSGTFSPTLG-YAIALARL-PAGASGEAEVEIRGKWQPVK 345
Query: 266 ASFPH 270
P
Sbjct: 346 IVKPP 350
>gi|313623891|gb|EFR94005.1| glycine cleavage system T protein [Listeria innocua FSL J1-023]
Length = 362
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 61/312 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRDSLIDKL-------------------------LFYKLRSNVI---------- 91
L ++ + + + + K+ S +
Sbjct: 112 LVVNAANTEKDFEWMVQNIVGDVTVKNVSSEFGQLALQGPNAEKILSKLTDANLSSISFF 171
Query: 92 --IEIQPINGVVLSWNQEHTFSNSSFIDER-----FSIADVLLHRTWGHNEKIAS-DIKT 143
IE + GV + S S + E AD E +A +
Sbjct: 172 GFIEDADVAGV------KTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGVAPIGLGA 225
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR+ + + I P +A ++ + L K +IG++ + + + RK
Sbjct: 226 RDTLRLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKQALINQKEAGLTRK 282
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
I +P P+ +D EIG + LA+ ID + + +
Sbjct: 283 LVGIELIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIGLAL--IDTAYTELGQELE 340
Query: 257 LTVHGVRVKASF 268
+ + +VKA
Sbjct: 341 VGIRNKKVKAKV 352
>gi|14521302|ref|NP_126777.1| glycine cleavage system aminomethyltransferase T [Pyrococcus abyssi
GE5]
gi|11132503|sp|Q9UZP8|GCST_PYRAB RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|5458520|emb|CAB50008.1| gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine
cleavage system T protein) [Pyrococcus abyssi GE5]
Length = 398
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/341 (14%), Positives = 97/341 (28%), Gaps = 78/341 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ + T D+ P + +L +G I LI + + ++
Sbjct: 50 SHMGEIYFRGKDALKFLQYVTTNDISKPPAISGIYTLVLNERGAIKDETLIFNMGNNEYL 109
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-ID 117
+ D + L F KL + ++ I + + + F ID
Sbjct: 110 MICDSDAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYDIAMFAVQGPKARDLARDLFGID 169
Query: 118 --------ERFSIADVL-------LHRTWGHNEKIASDIKTYH----------------- 145
R+ D + + E D YH
Sbjct: 170 INEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWE 229
Query: 146 --------------------ELRINHGIVDPNTDFLP--------STIFPHDALMDLLNG 177
LR+ G + + P A ++
Sbjct: 230 RILEEGKKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--A 287
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV--- 234
I K +IG++ + + + R + RK +P G + + IG +
Sbjct: 288 IYWDKD-FIGKDALLKQKERGLGRKLVHFKMVDKGIPREGYKVYANGELIGEVTSGTLSP 346
Query: 235 ---GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + I+ + + + P +Y
Sbjct: 347 LLNVGIGIAFVKEEYAKPGIEIEVEIRGARKKAITVTPPFY 387
>gi|163781956|ref|ZP_02176956.1| aminomethyltransferase (glycine cleavage system T protein)
[Hydrogenivirga sp. 128-5-R1-1]
gi|159883176|gb|EDP76680.1| aminomethyltransferase (glycine cleavage system T protein)
[Hydrogenivirga sp. 128-5-R1-1]
Length = 351
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 36/291 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A LQ + T ++ L + + +G + + + E+ F
Sbjct: 57 SHMGRFFVSGKDAFGVLQKLTTNNLEKLKPGRVQYNLFTNERGGVKDDVTVYMLSEEEFF 116
Query: 67 LEIDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGV--------VLSWNQEHTFSNS 113
L ++ R+ + + + + V I +Q G V H +
Sbjct: 117 LCVNAGNREKIKEWVGKHIPLEDASDRTVQIALQGREGERILSRFYDVSDLKYYHFKTFG 176
Query: 114 SFIDERFSIADVLLHRTWGH------------NEKIASDIKTYHELRINHGIVDPNTDFL 161
I R + E + + LRI G +
Sbjct: 177 DTIVSRTGYTGEDGFEVYAPVDEGVELFKELVKEVKSCGLGARDVLRIEAGFPLYGHEI- 235
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
I P +A +D + L+K ++G+E + R RK + +P G +
Sbjct: 236 SEDITPLEANLDRF--VDLSKE-FVGREALLE---RKPERKLFGLEMVDKGVPREGYRVF 289
Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+D EIG + K +A+ +D + + L V ++A
Sbjct: 290 KEDREIGVVSSGTFSPTLGKGIALCFVDIEERKEGNEVFLEVRNRLLRAVL 340
>gi|13471340|ref|NP_102909.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022085|dbj|BAB48695.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 815
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 77/287 (26%), Gaps = 54/287 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A FLQ + D+ + + +L +G I +S++ + +
Sbjct: 490 MTSFGKIRVEGRDACAFLQRLCANDMD-VAPGKIIYTQMLNQRGGIESDLTVSRLSDTAY 548
Query: 66 ILEIDRSKRDSLIDKLLFYK-----------------------LRS---NVIIEIQPING 99
L + + + L + R V
Sbjct: 549 FLVVPGATLQRDLAWLRRHVGEEFVVITDVTAAESVLCLMGPDARKLIQKVSPNDFSNEN 608
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142
QE R + L + ++ A +
Sbjct: 609 NPFGTFQEIEIGMGLARAHRVTYVGELGWELYVSTDQAAHIFEAIDEAGADVGLKLCGLH 668
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T RI D +A + + KG +IG++ V + + + R+
Sbjct: 669 TLDSCRIEKAFRHFGHDITDEDNV-LEAGLGF--AVKTAKGDFIGRDAVLKKKDAGLNRR 725
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+ L IL D +G + G L
Sbjct: 726 LVQFRLKDPQPLLFHNEAILRDGRIVGPITSGNYGHHLGGAIGLGYV 772
>gi|104783407|ref|YP_609905.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudomonas entomophila L48]
gi|95112394|emb|CAK17121.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudomonas entomophila L48]
Length = 373
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 104/309 (33%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L+ ++ D++ LP + R + PQG IL +++ + +DT
Sbjct: 54 SHMGQIILRGNDAARALETLVPVDIVDLPVGMQRYAMFTNPQGGILDDLMVANLGDDTLF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
L ++ + ++ + L + + ++ +Q V + + +F+
Sbjct: 114 LVVNAACKEQDLAHLRKHIGDRCEIQPLFEARALLALQGPAAVKVLERLAPEVAGMTFMQ 173
Query: 118 ER---FSIADVLLHRT------------------------WGHNEKIASDIKTYHELRIN 150
R D + R+ E + LR+
Sbjct: 174 FRPITLLGNDCFVSRSGYTGEDGYEISVPAAAAEALARRLLAEPEVQPIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
G+ D +T +L+ ++ + G + G + V Q + RKR +
Sbjct: 234 AGLCLYGHDMDTTTTPIEASLLWAISKVRRADGTRAGGFPGADTVFAQQQAGVARKRVGL 293
Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTV 259
+ G+ I+ +G + G +A+A +D A+ + V
Sbjct: 294 LPQERTPVREGAQIVDQAGKVVGEVCS--GGFGPTLGAPVAMAYVDSEHAALDTELFALV 351
Query: 260 HGVRVKASF 268
G +V
Sbjct: 352 RGKQVALKV 360
>gi|57641970|ref|YP_184448.1| glycine cleavage system aminomethyltransferase T [Thermococcus
kodakarensis KOD1]
gi|73919633|sp|Q5JDG3|GCST_PYRKO RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|57160294|dbj|BAD86224.1| glycine cleavage system protein T [Thermococcus kodakarensis KOD1]
Length = 398
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 90/333 (27%), Gaps = 78/333 (23%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
GK A+ FLQ + T D+ P + +L +G + L+ + DT+++ D
Sbjct: 58 RGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAF 117
Query: 75 DSLIDKLLFYK----LRSNVIIEIQ--------------------------PINGVVLSW 104
+ L K ++ +EI+ IN +
Sbjct: 118 EKLDAWFNAIKRGIEKFGDIDLEIENKTYDMAMFSIQGPKARDLAKELFGIDINDLWWFQ 177
Query: 105 NQEHTFSNSSFIDERFSIADVLL-----------HRTWGHNEKIASDIKTY--------- 144
+E + R H + + +
Sbjct: 178 AKEVELDGIKMLLSRSGYTGENGFEVYFEDANPYHPDPSKRGEPEKALHVWKTILEAGEK 237
Query: 145 -----------HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCY 185
LR+ G + + P A +D I K +
Sbjct: 238 YGIKPAGLGARDTLRLEAGYTLYGNETKEKQLLSTDIDEVTPLQANLDF--AIFWDKE-F 294
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKAL 239
IG+E + + + R + K +P G + D IG + +
Sbjct: 295 IGKEALLKQKERGLPSKMVHFKMVDKGVPREGYKVYKDGELIGEVTSGTLSPLLGIGIGI 354
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
A + + ++ + + + P +Y
Sbjct: 355 AFVKPEYAVPGVEIEVEIRGKPKKAVTVAPPFY 387
>gi|318040799|ref|ZP_07972755.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CB0101]
Length = 379
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 107/312 (34%), Gaps = 63/312 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ +++ G A LQA++ D+ + A + +L QG I +I D
Sbjct: 59 SHMGVLRLSGPGAKDLLQALVPTDLFRIGPGEACYTVLLNEQGGIRDDLIIYDRGWDEAT 118
Query: 64 ---TFILEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+L I+ + ++ + +L + + + +GV+L+ + I
Sbjct: 119 QAHELLLVINAACAEADTVWIRSQLE----PAGIQVADHKGDGVLLALQGPEAAAQLESI 174
Query: 117 D-------ERF--------SIADVLLHRTWGHNEKI-------ASDIKTY---------- 144
RF I + + RT E + + +
Sbjct: 175 SGTSLAGLPRFGHRNLTLPGIGEAFVARTGYTGEDGFELLLGRGAGLSFWTLCQERGIQP 234
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR+ + +D ST P + + L + + K ++G+EV+ +
Sbjct: 235 CGLGARDTLRLEAAMHLYGSDMDASTS-PLEVGLGWLVHLEMPKP-FVGREVLEQQTSSG 292
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGT--LGVVVGK-------KALAIARIDKVDH 249
+ R+ + +P G +L E G+ +G V +A+A +D
Sbjct: 293 VKRRLVGLQLQGRAIPRHGYSVLASGAEAGSTPIGTVTSGGWSPSLEAGIALALVDTAAA 352
Query: 250 AIKKGMALTVHG 261
+ +A+ + G
Sbjct: 353 KLGSQLAVEIRG 364
>gi|281412268|ref|YP_003346347.1| glycine cleavage system T protein [Thermotoga naphthophila RKU-10]
gi|281373371|gb|ADA66933.1| glycine cleavage system T protein [Thermotoga naphthophila RKU-10]
Length = 364
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D +
Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ + + + + + +V I I ++ E + +++
Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEILNISDTTALIAFQGPEAQETLQELVEDSLEEIAY 168
Query: 123 ----------ADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147
+ L+ RT E + K + L
Sbjct: 169 YSFRKSIVAGVEALVSRTGYTGEDGFELMVETEDAPKVWDALMNLLRKIDGRPAGLGARD 228
Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R+ + D + P + + + + L K ++G+E + ++ + + ++ +
Sbjct: 229 VCRLEATYLLYGQDM-DESTNPLEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVERKLV 282
Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ + + G +L + +G + ALA+ V ++K G L
Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKVGDQLE 337
Query: 259 V 259
V
Sbjct: 338 V 338
>gi|291296095|ref|YP_003507493.1| glycine cleavage system T protein [Meiothermus ruber DSM 1279]
gi|290471054|gb|ADD28473.1| glycine cleavage system T protein [Meiothermus ruber DSM 1279]
Length = 351
Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 51/296 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A+ FLQ DV L A S + QG ++ + + E+ +++ ++ +
Sbjct: 56 IKGPGALEFLQYATLNDVTKLKVGRAHYSMLPNAQGGVVDDIYLYRTGEEEYLMVVNAAN 115
Query: 74 RDSLIDKLLF----YKLRSN------VIIEIQPINGVVLSWNQEHTF-----SNSSFIDE 118
+ + L +++R +I +Q V + T N +F+ +
Sbjct: 116 IEKDWEHLQRLAEGFEVRLEDASDFFALIAVQGPQAVAVLQKLCDTDLVSRKKNDTFMGK 175
Query: 119 ------RFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGIVDP 156
RF+ + + LR+ G
Sbjct: 176 LAGKWVRFARTGYTGEDGYEVFVAPDEAPAVWAALLEAGVTPCGLGARDTLRLEAGFPLY 235
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ T P D + + K + Q ++ +R + + +P
Sbjct: 236 GHELT-DTTNPLCTPFDWV--VKGQKEFFGKQAMLD-----AACERRLVGLLVEGGIPRE 287
Query: 217 GSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G +L E+G L LA + D + +
Sbjct: 288 GYRVLGGGKEVGILTSGTHSPVLKKGIGLAYVQSDWAGVGTALEVEIRGRAAPAAV 343
>gi|52630863|gb|AAU84891.1| aminomethyltransferase [Eubacterium acidaminophilum]
Length = 371
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 93/310 (30%), Gaps = 54/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V GK A F+ ++ D+ L + P G + L+ K + ++
Sbjct: 54 SHMGEVEVKGKEAEKFINYLVPNDITVLEPNQVLYTQFCYPHGGTVDDLLVYKYTNEDYL 113
Query: 67 LEIDRSKRDSLIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110
L I+ + D + + + I + + N E
Sbjct: 114 LVINAANVDKDYAWIVENSKGFDVSLK-NISPEVSEIALQGPNAEKILQKLTDTDLAQVK 172
Query: 111 ----------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144
+S + R + NE +++ +
Sbjct: 173 FFYCKKDVNIGGASCLISRTGYTGEDGFEIYTSNEDVSAVWEKLMEAGKDLGIKPAGLGC 232
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
LR + + I P +A + + L K +IG+E + + + + RK
Sbjct: 233 RDTLRFEVALPLYGNELG-EDISPLEAGLGYF--VKLDKEADFIGKEALKKQKAEGLKRK 289
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256
+ + + + D ++G + ALAI + + + +
Sbjct: 290 LVGLELKGKGIARHECEVYSGDKKVGFVTTGYQSPSTGKVVALAIVDTEYTEMGTQLEIQ 349
Query: 257 LTVHGVRVKA 266
+ + V +
Sbjct: 350 IRKNRVPAEV 359
>gi|313638061|gb|EFS03335.1| glycine cleavage system T protein [Listeria seeligeri FSL S4-171]
Length = 362
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/311 (12%), Positives = 101/311 (32%), Gaps = 47/311 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I
Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111
Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102
L ++ + + + + Y + V+ ++ I+
Sbjct: 112 LVVNAANTEKXXEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKVLTKLTDIDLSSISFF 171
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149
+ ++ + I R + ++ + + LR+
Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
+ + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 232 EAVLALYGQEL-SQEITPLEAGLNF--AVKLNKEADFIGKEALVKQKEAGLTRKLVGIEL 288
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262
+P + D +IG + LA+ + + + + +
Sbjct: 289 IERGIPRHDYSVFQKDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348
Query: 263 RVKASFPHWYK 273
+ K +YK
Sbjct: 349 KAKVIATPFYK 359
>gi|83815405|ref|YP_445737.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855]
gi|294507632|ref|YP_003571690.1| Aminomethyltransferase [Salinibacter ruber M8]
gi|83756799|gb|ABC44912.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855]
gi|294343960|emb|CBH24738.1| Aminomethyltransferase [Salinibacter ruber M8]
Length = 374
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/326 (15%), Positives = 105/326 (32%), Gaps = 68/326 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A+ +Q ++T D TL A + + TP G I+ ++ + ED ++
Sbjct: 56 SHMGEVLIQGDQALALVQHLVTNDAETLYDGRAMYTVMCTPDGGIIDDGIVYRRAEDEYL 115
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------ 110
+ ++ + R+ + D + + +L+
Sbjct: 116 MVLNAANRERDLTWMHDHNPM-----GATLRDISADTALLALQGPKALDIAQPFLDDDLD 170
Query: 111 ----------SNSSFID-----------------------ERFSIADVLLHRTWGHNEKI 137
+ +F+D +R L
Sbjct: 171 DLSFYHFWERTGGAFLDCETALISRTGYTGEPGLELYVPADRARDVWTTLLEAGADRGLK 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ + LR+ G+ D I P++A + L + L KG +IG+E + +I
Sbjct: 231 PAGLGARDTLRLEAGLCLHGNDIT-EDITPYEARLGWL--VKLDKGDFIGREALRQIHEH 287
Query: 198 NIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251
RK + T+ P IL IG + + + +
Sbjct: 288 GPERK-LVGFVATERGIPRHDDILQSAGGDAIGVVTSGTQSPLLDAGIGLGYVPNEPAYT 346
Query: 252 KKGMALTVHGVR----VKASFPHWYK 273
+ G AL V R V+ + P +++
Sbjct: 347 EPGRALQVASRRRTFDVEVTEPPFHE 372
>gi|194337376|ref|YP_002019170.1| glycine cleavage system T protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693398|sp|B4SED4|GCST_PELPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|194309853|gb|ACF44553.1| glycine cleavage system T protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 365
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FLQ + T D+ A+ + +L P G I+ +I +I+ +TF
Sbjct: 49 SHMGNFYVRGARAKEFLQYMTTNDLDNAEDGQAQYNLMLYPHGGIVDDLIIYRIDSETFF 108
Query: 67 LEIDRSKRDSLIDKLLFY-KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ S + L + V++E +++ + + +
Sbjct: 109 LIVNASNAQKDFEWLQQHIAAFEGVVLEDHTDQLSLIALQGPLALNILATVFPALDVPAL 168
Query: 120 ---------FSIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146
F +V++ T EK A + +
Sbjct: 169 GAFRFCKVLFQGTEVMIAGTGYTGEKGVEICLPNAMALPLWEALFEAGKESGIQPIGLGA 228
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + P +A + + + + KG ++G+E + Q +++
Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VKMGKGHFMGKE--ACQQVEGNLKRG 283
Query: 204 PMIITGTDD-LPPSGSPILTDDI-EIGTLGV 232
+ LP + D EIG +
Sbjct: 284 VAGFSLDGRVLPRQHFKLYNSDRQEIGWVCS 314
>gi|157412638|ref|YP_001483504.1| aminomethyltransferase [Prochlorococcus marinus str. MIT 9215]
gi|157387213|gb|ABV49918.1| Predicted aminomethyltransferase [Prochlorococcus marinus str. MIT
9215]
Length = 278
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 92/258 (35%), Gaps = 38/258 (14%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70
+ GK A F+ I T ++L + LTP+G + L+ + + + IL
Sbjct: 17 SITGKDARKFVNGITTGNILN-SENEVIKTCWLTPKGVMRALIEIIFLESNLEVIILV-- 73
Query: 71 RSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ID ++ +I IQ I+ SW D+ F I
Sbjct: 74 -GNTHEIIDYFNQIIFPADDVIMSKPFLINRIQEIDEST-SWRTYRPIF-FKTEDKEFEI 130
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
L+ +D+K + +IN I + P + + L I K
Sbjct: 131 YKNKLNLL------NPNDLKLW---KINQAIPSLEREI-NGKNNPLELGLKDL--IDFNK 178
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL------TDDIEIGTLGVV--- 233
GCY+GQE +S+I++ + +++ I + DI +G + +
Sbjct: 179 GCYLGQETMSKIKNVSSLKQEIRIWKSFESNLNLDVEDKNLYINSAKDISVGKITSIFKL 238
Query: 234 -VGKKALAIARIDKVDHA 250
K LA+ + ++
Sbjct: 239 DSQIKGLAMIKRKYLEEG 256
>gi|322797540|gb|EFZ19584.1| hypothetical protein SINV_05762 [Solenopsis invicta]
Length = 444
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 93/269 (34%), Gaps = 53/269 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK A +L+++ T D+ L A + +G IL +I+K +ED + + +
Sbjct: 126 RVFGKDAGEYLESLTTCDLKNLSKGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAG 185
Query: 73 KRDS----LIDKLLFYK-----------------------------LRSNVIIEIQPING 99
+RD L+++ +K L+S V I++Q +
Sbjct: 186 RRDEDSQLLLERQDDFKRIGKNVHVDFLDPLEQGLIALQGPTAATVLQSLVKIDLQTLKF 245
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYH 145
+ E S S+ R L+ R + + +
Sbjct: 246 MNSV---ETEVSGSNIRISRCGYTGEDGFEISVPANDAINLVERILEIPDVKLAGLGARD 302
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D P +A + L + + G E + +KR
Sbjct: 303 SLRLEAGLCLYGHDI-NEDTTPIEAALTWLVAKRRRAEANFPGAERILSQIKTGPTKKRV 361
Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGV 232
++ G G+PILT + +G++
Sbjct: 362 GLLLGQGPPAREGAPILTPEGERVGSVTS 390
>gi|186472033|ref|YP_001859375.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815]
gi|184194365|gb|ACC72329.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815]
Length = 827
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 102/300 (34%), Gaps = 59/300 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G+ A LQ I+ DV +P + + +L +G F ++++ +D ++L ++
Sbjct: 504 VKGRDAEAVLQQIVANDVA-VPPGTSVYTGMLNERGGYESDFTLTRLCDDQYLLVTGSAQ 562
Query: 74 R----DSLIDKL------------LFYKL------RSN---VIIEIQPINGVVLSWNQ-- 106
D++ ++ Y + R+ + N ++ Q
Sbjct: 563 TTRDFDAIERRIPPDSHCMLVDVTSQYAVLAVMGPRARDLLASVSKAGWNNEAFAFGQSR 622
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149
E ++ R + L + E +T H LRI
Sbjct: 623 EVDIGYATVRATRITYVGELGWELYVPVEFAVGVYETLHAAGKQFGLKNAGYYALDSLRI 682
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI-IRKRPMII 207
G + P T P +A + L K ++G+E + R+ R +++R ++
Sbjct: 683 EKGYRAWGRELSPET-NPFEAGLAF--ACKLDKDVPFVGREALVRL--RGEPLQRRLAVL 737
Query: 208 TGTDD---LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260
T + G I+ D + +G + L A+ + + D A LT
Sbjct: 738 TADGASDRMLWGGEAIVRDGVAVGFVSSAAFGHTLGCPVAMGYVKRNDGAALDDAWLTSG 797
>gi|254481184|ref|ZP_05094429.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214038347|gb|EEB79009.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 398
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 86/301 (28%), Gaps = 72/301 (23%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L ++T DV L T +G+++ I ++ +D F+L
Sbjct: 68 EISGPDAEAMLNRMVTRDVSKLGINRVTYVCWCTDEGRMIDDGTIFRLADDRFMLTCGSP 127
Query: 73 KRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEH----------------------- 108
L L V + LS
Sbjct: 128 SVA----WLRKSVLGFDQVTVRDVTDETAALSLQGPTSCTVLQQMGLEDIATLKPFGIAH 183
Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147
F S + R L + W E + + L
Sbjct: 184 FPFHGGSLMVSRTGFTGDLGYELWVTPEL---ALTLWDVLYAAGENYGIHPYGETATNMA 240
Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
R+ G + P+ +F P++ + L + K + G++ + + +
Sbjct: 241 RLEAGFIMPDMEFNEALKTVHFEHDHTPYELSLGWL--VDFKKPHFNGRKALLAEKQQG- 297
Query: 200 IRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHA 250
+ + + GS + +D +IG + + ALA+ +++ +
Sbjct: 298 PHYTLVKLDIEGNKVADGSWLYSDKACRKKIGYVTSAMWSPSAKANIALAMIETPRLNGS 357
Query: 251 I 251
+
Sbjct: 358 V 358
>gi|145299564|ref|YP_001142405.1| glycine cleavage system aminomethyltransferase T [Aeromonas
salmonicida subsp. salmonicida A449]
gi|166221536|sp|A4SP35|GCST_AERS4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|142852336|gb|ABO90657.1| glycine cleavage system T protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 365
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 98/309 (31%), Gaps = 47/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FLQ ++ DV L A S +L P G ++ + + + +
Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTVPGKALYSGMLNPDGGVIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + + + V + +P ++ + + A
Sbjct: 110 RLVVNSATREKDLAWIRHHAIDFAVSVTERPELAMIAVQGPNAKAKAAKVFTPEQNAAVE 169
Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149
L + N + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACDLWQALLDNGVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + D +I P A M +IG+ + + K+ ++
Sbjct: 230 EAGMNLYSQDM-DESISPLAANMAWTLAFEPASRQFIGRAALEAQKAAGTQLKQVGLVME 288
Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ +G P+ + + G + ++A+AR+ + D + + +
Sbjct: 289 EKGVLRAGMPVTFTTASGEKREGVITSGSFSPTLGYSIALARVPR-DIGEQAEVEIRKKL 347
Query: 262 VRVKASFPH 270
V VK + P
Sbjct: 348 VTVKVTKPA 356
>gi|148269849|ref|YP_001244309.1| glycine cleavage system aminomethyltransferase T [Thermotoga
petrophila RKU-1]
gi|166221577|sp|A5IKL0|GCST_THEP1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|147735393|gb|ABQ46733.1| aminomethyltransferase [Thermotoga petrophila RKU-1]
Length = 364
Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D +
Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ + + + + + +V I I ++ E + +++
Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEILNISDTTALIAFQGPEAQETLQELVEDSLEEIAY 168
Query: 123 ----------ADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147
+ L+ RT E + K + L
Sbjct: 169 YSFRKSIVAGVEALVSRTGYTGEDGFELMLEAKDAPKVWDALMNLLRKIDGRPAGLGARD 228
Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R+ + D + P + + + + L K ++G+E + ++ + + ++ +
Sbjct: 229 VCRLEATYLLYGQDM-DESTNPLEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVERKLV 282
Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ + + G +L + +G + ALA+ V ++K G L
Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKVGDQLE 337
Query: 259 V 259
V
Sbjct: 338 V 338
>gi|75760929|ref|ZP_00740939.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74491599|gb|EAO54805.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 260
Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G ++ FLQ ++T DV TL A+ +A+ G + LI K E+ ++
Sbjct: 52 SHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYL 111
Query: 67 LEIDRSKRDSLIDKLLFYKL 86
L I+ S + + L + +
Sbjct: 112 LVINASNIEKDYEWLASHVI 131
>gi|332885678|gb|EGK05924.1| aminomethyltransferase [Dysgonomonas mossii DSM 22836]
Length = 365
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/317 (17%), Positives = 107/317 (33%), Gaps = 58/317 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+PFLQ +++ DV TL A+ +AI+ QG I+ +I E ++
Sbjct: 49 SHMGEIWVKGPRALPFLQRMLSNDVATLEIGKAQYTAIINDQGGIVDDIIIYHYEPYKYM 108
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSN------------ 112
L ++ S + L + +L +E L+ +
Sbjct: 109 LVVNASNIEKDWKWLTDHNEEL---ADLENSSDTIAQLAIQGPKALATLQKLTKIDLTMI 165
Query: 113 --SSFIDERF--SIADVLLHRTWGHNEKIASDIKTYHEL--RINHGIVDPNTDF------ 160
SF+ S D ++ G+ ++ Y E I + I + +F
Sbjct: 166 PYYSFVIGSLKGSGLDSVIISNTGYTGAGGFELYFYPEYGEDIWNAIFEAGEEFGIKPIG 225
Query: 161 -------------------LPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNII 200
L T P +A + + T+G + +E++ + + +
Sbjct: 226 LGARDTLRLEMGFCLYGNDLDHTTTPIEAGLGWI--TKFTEGKNFTAREILEKQKQEGVN 283
Query: 201 RKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253
RK +P G I+ ++ +IGT+ L + +
Sbjct: 284 RKLCGFKMQEKGIPRHGYDIVNENNEKIGTVTSGTMSPTAKIGIGLGYIKPEYAKLGTSI 343
Query: 254 GMALTVHGVRVKASFPH 270
+ + ++ + P
Sbjct: 344 FIKVREKNLKAEVVKPP 360
>gi|83950288|ref|ZP_00959021.1| putative aminomethyltransferase protein [Roseovarius nubinhibens
ISM]
gi|83838187|gb|EAP77483.1| putative aminomethyltransferase protein [Roseovarius nubinhibens
ISM]
Length = 774
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 93/301 (30%), Gaps = 62/301 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE----------- 62
V G A+ LQ +T DV L + + +G +L + ++E+
Sbjct: 454 VVGPDAVELLQHCMTRDVAKLSQHRGFYALMCDARGSVLDDGTLFRLEDTAFRWCCGSDN 513
Query: 63 ---------DTFILEIDRSKRDSLIDKL------LFYKLRSNVII------EIQPINGVV 101
+ L++ + L LR V+ + +
Sbjct: 514 SALHLREQAEALGLDVRVLSLGDRVQNLAIQGPKSRDILR-EVVFTQPSRPALDNLKWFG 572
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTY 144
+ + H F+ R L + + +
Sbjct: 573 FTVARLHDRDGPMFMLCRTGFTGELGYEIFCDRNDAVEIWDGLMAAGEKHGLTPMGSAAL 632
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ +F P + ++ + + K +IG+E + R + R++
Sbjct: 633 DPLRLEAGLMIAGAEFGPDSD-AMESGLGF--AVDFKKPAFIGREALER--NATAPRRKL 687
Query: 205 MIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+ + T + P G PI ++G + A+A+AR+ + G L V
Sbjct: 688 VGLKFTGMEAPHHGDPIFVGREQVGVVTSGAMSHELGHAIAMARV--AIECAETGGTLEV 745
Query: 260 H 260
Sbjct: 746 G 746
>gi|332140419|ref|YP_004426157.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
macleodii str. 'Deep ecotype']
gi|327550441|gb|AEA97159.1| glycine cleavage T protein (aminomethyl transferase) [Alteromonas
macleodii str. 'Deep ecotype']
Length = 264
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-PPSGSPIL 221
P + LNGI KGCY+GQEVV+R + ++ + G +
Sbjct: 135 GEYIPQMINVQALNGIDFDKGCYMGQEVVARTRFLGKNKRAAFSFKLEGKVDVTPGDAL- 193
Query: 222 TDDIEIGTLGVVVGKK 237
+ ++G V GK
Sbjct: 194 --EKQLGENWRVAGKI 207
>gi|320333609|ref|YP_004170320.1| Aminomethyltransferase [Deinococcus maricopensis DSM 21211]
gi|319754898|gb|ADV66655.1| Aminomethyltransferase [Deinococcus maricopensis DSM 21211]
Length = 354
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 89/281 (31%), Gaps = 54/281 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ FLQ T DV L A+ + +G ++ + + E ++
Sbjct: 54 SHMGEFRVRGPGALDFLQRATTNDVSKLKPGRAQYGLLPNDRGGLIDDLYVYMVAEQEYL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ + L +V + + G++ + + ++ S
Sbjct: 114 IVVNAGNIERDFAHLQTLARDFDVTFVDESALWGLLAVQGPQAEATLQPHVNVDLSAKKK 173
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
DV + RT E + + + LR+
Sbjct: 174 NAFFPATLFDLDVFMARTGYTGEDGFEVFVKTDEAEVVWDKLLTLGVVPAGLGARDTLRL 233
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIIT 208
G +F P + G ++ + G+E ++ R +R + +T
Sbjct: 234 EAGFPLYGHEF-SDDTHPLSSGY----GWAVKDKAFHGREHILDRA-----TPERLIGLT 283
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243
P G P+L + +G + A+A+ R
Sbjct: 284 LDKVPPREGYPVLLNGEVVGRVTSGTTSPTLKRPIAMALVR 324
>gi|322368942|ref|ZP_08043509.1| glycine cleavage system aminomethyltransferase T [Haladaptatus
paucihalophilus DX253]
gi|320551673|gb|EFW93320.1| glycine cleavage system aminomethyltransferase T [Haladaptatus
paucihalophilus DX253]
Length = 365
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 51/290 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ I+V G A +Q + T DV L ++ + I G I+ ++ ++ ED
Sbjct: 51 SHMGEIEVSGPDAERLMQRLTTNDVTQLSPGDSQYAMITDEDGVIIDDTVVYRLSEDDDA 110
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEI---QPINGVVLSWNQEHTFSNSSFIDERF 120
F+ + + + D+ ++ ++ EI + + + + DE
Sbjct: 111 EFLFIPNAGHDEMMHDRWKRFRSEWDMDAEIRNATDDYAMYAVQGPDAADAVNEAADESV 170
Query: 121 SI--------ADVLLHRTW----------GHNEKIASDIKT--YHE-------------L 147
+ A V R W G + SD + L
Sbjct: 171 ADLSKFEAMYASVAGVRCWVARTGYTGEDGFELILPSDEAETVWDAFDCQPCGLGARDTL 230
Query: 148 RINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R G + DF P++A + + ++G++ + R++ +
Sbjct: 231 RTEMGYLLSGQDFDYEDDPRNPYEAKVGFTVKLDTE---FVGRDALERVKEEGVEETFVG 287
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVD 248
+P G I + +D IGT+ L D D
Sbjct: 288 FRLVDRGVPRHGYDITSTEDTIIGTVTSGTMSPTLSEPIGLGYVPTDYAD 337
>gi|255534670|ref|YP_003095041.1| glycine cleavage system aminomethyltransferase T [Flavobacteriaceae
bacterium 3519-10]
gi|255340866|gb|ACU06979.1| Aminomethyltransferase (glycine cleavage system T protein)
[Flavobacteriaceae bacterium 3519-10]
Length = 359
Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 90/304 (29%), Gaps = 53/304 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A LQ + T +V +L A+ + + G I+ +I K+ ++ + + ++ S
Sbjct: 56 VEGPTAKDLLQYVTTNNVDSLETGKAQYTCLPNGNGGIVDDLIIYKMSDEKYFVVVNASN 115
Query: 74 RDSLIDKLLFY--KLRSNVI--------IEIQPINGV---------------VLSWNQEH 108
+ + + Y K + + I +Q + Q
Sbjct: 116 IEKDWNHITKYNEKFGAKLTNVSDELSLIAVQGPKASETLQKLTETNLAELPYYHFTQGS 175
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINH 151
S + I + NE + + LR+
Sbjct: 176 VASVADVIISNTGYTGSGGFEIYFKNENAVAIWEALTAAGEKFGLLPCGLAARDTLRLEK 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D T P +A + + K ++ +E ++ + + RK
Sbjct: 236 GFCLYGNDI-DDTTSPLEAGLGWI--TKFDKD-FVDKEFFAKQKEEGVTRKLVGFEMQER 291
Query: 212 DLPPSG-SPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P G + + + EIGT+ L + + + + V
Sbjct: 292 AIPRHGYAVVDAEGNEIGTVTSGTMSPMKNIGIGLGYVAKSHLKVGSEIFIKIRNKNVPA 351
Query: 265 KASF 268
+
Sbjct: 352 QVVK 355
>gi|193214226|ref|YP_001995425.1| glycine cleavage system T protein [Chloroherpeton thalassium ATCC
35110]
gi|238692698|sp|B3QV24|GCST_CHLT3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|193087703|gb|ACF12978.1| glycine cleavage system T protein [Chloroherpeton thalassium ATCC
35110]
Length = 362
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V GK A FLQ + T DV +L A+ S +L G ++ L+ KI ++ +
Sbjct: 49 SHMGEFEVKGKGAKAFLQNMTTNDVESLCDGKAQYSLLLYEDGGVVDDLLVYKIADEHYF 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
L ++ S + D L ++ V++E + +++ +
Sbjct: 109 LIVNASNIEKDFDWLKQHQPDDEVVLENRSDELSLIAIQGPKAEA 153
>gi|323345580|ref|ZP_08085803.1| aminomethyltransferase [Prevotella oralis ATCC 33269]
gi|323093694|gb|EFZ36272.1| aminomethyltransferase [Prevotella oralis ATCC 33269]
Length = 363
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 43/273 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A ++ I T D+ P +L G + L+ K+ E+ F
Sbjct: 51 SHMGEVYVTGIDAERYVNHIFTNDITNAPIGKVFYGMMLYADGGTVDDLLVYKMTENEFF 110
Query: 67 LEIDRSKR--------------DSLIDKLLFY----KLR---SNVIIEIQ---PINGVVL 102
+ I+ + D ID Y ++ + ++E P +
Sbjct: 111 IVINAANIGKDVDWMRENAEGFDVAIDHCSDYYGQLAVQGPEAEAVVEEVLSIPCKELAF 170
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------------ASDIKTYHELR 148
+ + I R +G + I + LR
Sbjct: 171 YTAKTLELEGETVIISRTGYTGEDGFEIYGSHSFIRNQWDKLMASNRCKPCGLGCRDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + P A + + L K +IG+E + + + + +K +
Sbjct: 231 FEVGLPLYGNELSEGIS-PVMAGLSMFC--KLDKEEFIGKEALIKQKTHGVDKKLVGLAL 287
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+P G ++ D ++G + G + +++
Sbjct: 288 EDRAVPRHGYAVMKDGKQVGIITT--GYRGISV 318
>gi|51893060|ref|YP_075751.1| glycine cleavage system protein T [Symbiobacterium thermophilum IAM
14863]
gi|59797718|sp|Q67N36|GCST_SYMTH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|51856749|dbj|BAD40907.1| glycine cleavage system protein T [Symbiobacterium thermophilum IAM
14863]
Length = 375
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/317 (15%), Positives = 104/317 (32%), Gaps = 61/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ +Q + T D L + + + G ++ LI +++E +
Sbjct: 53 SHMGEFEVRGPQALDLIQLVSTNDAAKLAVGRVQYALMCYENGTVVDDILIYRLDEHRYW 112
Query: 67 LEIDRSKRD-------SLIDKLLFYKL----RSNVIIEIQPIN-------------GVVL 102
L ++ + ++ + L RS I + + GVVL
Sbjct: 113 LVVNAGNTQKDWEWINTARERAGLHNLELIDRS-AEIALLALQGPKAEEILQPLATGVVL 171
Query: 103 SWNQEHTFSNS-------SFIDERFSIADVLLHRTWGHNEKIASDIKTY----------- 144
S + + + + + + R + E +A+ +
Sbjct: 172 SQLEPFSLAKNVTVSGVPTLVLSRTGYTGEDGFEIYVKAEDVAALWEALLEAGDEQGLLP 231
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
LR + + P +A + + L KG +IG++ ++RI+ +
Sbjct: 232 CGLGARDTLRFEAKLPLYGHEISDQH-NPLEAGLGF--AVKLKKGVDFIGRDALARIKEQ 288
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAI 251
RK I +P G P+ +G + ALA + A+
Sbjct: 289 GPTRKLVGIEMIDRGVPRQGYPVAVGGEVVGEVTTGSFSPTLEKNIALAYVPV--AHSAV 346
Query: 252 KKGMALTVHGVRVKASF 268
+ + + G +KA
Sbjct: 347 GTEVEVIIRGRALKARV 363
>gi|300855594|ref|YP_003780578.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435709|gb|ADK15476.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 368
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 99/301 (32%), Gaps = 49/301 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK A+ F+Q +IT D + + + P+G I+ L+ K + F L I+ +
Sbjct: 59 ITGKDALEFVQNLITNDAAKIKENQILYTPMCYPEGGIVDDILVYKFTNEHFFLVINAAN 118
Query: 74 RDSLIDKLLF----YKLRSN------VIIEIQPINGVVLSWNQEHTFSNS---------- 113
D ID + +++ + + IQ N + T +S
Sbjct: 119 TDKDIDWMKKNKENFQVDIKNISPSIIQLAIQGPNAQKILQKLTDTDLDSIKFYFFKKDV 178
Query: 114 SFIDER--FSIADVLLHRTWGHNEKIASDIKTYHE--------------------LRINH 151
+R S + + + + + LR
Sbjct: 179 LVAGKRCMVSRTGYTGEDGFEIYSETENAEYLWDKILETGKEDGIKPIGLGARDTLRFEV 238
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ + +I P +A + + + L K +IG++ + + + + RK
Sbjct: 239 SLPLYGNEL-SKSITPLEAGIGIF--VKLDKDNFIGKDALVKQKKEGLKRKIVGFEMKER 295
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ G + ++ +IG + +L A ID I +++ V + A
Sbjct: 296 GISRHGYEVFAENKKIGEVTTGYRSPSLNKNIGFALIDSKYAPIGTSISIKVRNKLLNAE 355
Query: 268 F 268
Sbjct: 356 V 356
>gi|313633367|gb|EFS00208.1| glycine cleavage system T protein [Listeria seeligeri FSL N1-067]
Length = 362
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/311 (12%), Positives = 101/311 (32%), Gaps = 47/311 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I
Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111
Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102
L ++ + + + + Y + V+ ++ I+
Sbjct: 112 LVVNAANTEKDYEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKVLTKLTDIDLSSISFF 171
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149
+ ++ + I R + ++ + + LR+
Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
+ + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 232 EAVLALYGQEL-SQEITPLEAGLNF--AVKLNKEADFIGKEALVKQKEAGLTRKLVGIEL 288
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262
+P + D +IG + LA+ + + + + +
Sbjct: 289 IERGIPRHDYSVFQKDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348
Query: 263 RVKASFPHWYK 273
+ K +YK
Sbjct: 349 KAKVIATPFYK 359
>gi|307108946|gb|EFN57185.1| hypothetical protein CHLNCDRAFT_30552 [Chlorella variabilis]
Length = 418
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 58/302 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK A+PFL+ ++ D+ L S +G I+ +++K++ D + ++
Sbjct: 101 LTLKGKDAVPFLEGLVVGDIAALADGTGTLSVFTNEKGGIIDDTVVTKVKGDELYIVVNA 160
Query: 72 SKRDSLIDKLLFY--KLRSN---VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
R+ + + + ++ V + + ++ E F+ E
Sbjct: 161 GCREKDLAHIGKHLEAFKAKGGQVDLVLHDDRSLLALQGPEAVAVLQQFVGEDLDKVYFS 220
Query: 123 --------------------------ADVLLHRTWGHNEKIASD-------IKTYHELRI 149
+ RT E + D + LR+
Sbjct: 221 NFRKLDIKGVPCFLTRTGYTGEDGFELSIPSDRTVELTEALMGDRRVRLCGLGPRDSLRL 280
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL------NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ D I P +A + G I Q++ + +R
Sbjct: 281 EAGLCLYGNDL-NEDITPIEAGLTWTVGKRRREAFDFLGGQVIKQQLAD-----GVSVRR 334
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259
++ + TD ++G + L A+ +DK + + V
Sbjct: 335 VGFVSSGAPARQHSEVLTTDGKKVGEITSGAFSPCLKKNIAMGYVDKSMAKAGTELKVNV 394
Query: 260 HG 261
G
Sbjct: 395 RG 396
>gi|297623317|ref|YP_003704751.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093]
gi|297164497|gb|ADI14208.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093]
Length = 362
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/307 (12%), Positives = 92/307 (29%), Gaps = 60/307 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A FL+ D L + + S + +G ++ + + + F+
Sbjct: 50 SHMGEVRVTGPGAEAFLRYATLNDPSRLKPQQGQYSMLPNDRGGLIDDLYVYRDAPEAFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------ 108
+ + + R++++ L + + + +L+
Sbjct: 110 IVCNAANREAVVAHLTRLSYDYDATVTDESDAWALLALQGPGAALLAGRHAEAELTALKK 169
Query: 109 ------TFSNSSFIDERFSIADV-------------LLHRTWGHNEKIASDIKTYHELRI 149
T + + R L R + LR+
Sbjct: 170 NRTLQTTLAGCAVTLARTGYTGEDGFEIFCRPEDAPTLWRALVGAGATPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-----------SRIQHRN 198
G + P T P + + + G+E + R++ R
Sbjct: 230 EAGFPLFGHELGPET-NPRCTDFAWV----VKDKPFFGREAMWHRTCTRRLVGLRLKQRG 284
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKG 254
+ R ++ G D+ + S + ++G + + +A+A + +
Sbjct: 285 VARPGYRVLAGAADVLEAESD---EGTKVGEVTSGTISPLTREGIAMAWVRRAYSEPGTE 341
Query: 255 MALTVHG 261
+A+ + G
Sbjct: 342 LAVEIRG 348
>gi|289547956|ref|YP_003472944.1| glycine cleavage system protein T [Thermocrinis albus DSM 14484]
gi|289181573|gb|ADC88817.1| glycine cleavage system T protein [Thermocrinis albus DSM 14484]
Length = 343
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 114/290 (39%), Gaps = 53/290 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK+++ L+ + T V L + + I P+G I I +++ED F+
Sbjct: 49 SHMGRLYVKGKNSLVLLEKLTTRQVEKLRVGKVQYNLISNPEGGIKDDVTIYRLDEDVFM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
+ ++ R+ +++ S +E++ + + + S+
Sbjct: 109 ICVNAINREKIVNW------FSQNQLEVEDVTEKTVQIALQGKTSSQILSKFFPIDDIRY 162
Query: 113 ------SSFIDERFSIADVLLHRTWGHNE---KIASDIKTY---------HELRINHGIV 154
SF+ R + E ++ S++ + LRI G+V
Sbjct: 163 YHFKVVDSFLVSRTGYTGEDGFEIYAPVEEGKELWSELVKWCPPCGLGARDVLRIEAGLV 222
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT-GTDDL 213
+ TI P +A ++ +S K +IG+E + +R+R + +
Sbjct: 223 LYGHEI-SETISPLEAGLER--YVSFQKE-FIGKEAML----SKEVRRRLYGLKLLQKGV 274
Query: 214 PPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
P GS I D EIG + V + +A+A +DK +K+G+ + V
Sbjct: 275 PREGSRIFLDGKEIGVVSSGSFSPVLNRGIALAFVDK--EFLKEGLRVKV 322
>gi|315647597|ref|ZP_07900699.1| glycine cleavage system T protein [Paenibacillus vortex V453]
gi|315277036|gb|EFU40377.1| glycine cleavage system T protein [Paenibacillus vortex V453]
Length = 262
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A F+Q + T DV L A+ + + G + L+ K+ D F+L ++ S
Sbjct: 60 VTGADAEAFIQKMTTNDVTRLSAGQAQYTLMCYDNGGTVDDLLVYKLSADQFMLVVNASN 119
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
D + L + L +VII +++
Sbjct: 120 IDKDLQWLQDH-LAGDVIIRNVSAETALIAIQGPDA 154
>gi|124025069|ref|YP_001014185.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str.
NATL1A]
gi|123960137|gb|ABM74920.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus
str. NATL1A]
Length = 282
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 40/279 (14%)
Query: 12 IKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEED--TFILE 68
+ + G+ FL TADV L+ +G L L ++ +D ++
Sbjct: 16 LLLKGQGTTSFLHGQTTADVFAQKELDRIFMCCWLSTKG-FLKALLEIRLSDDMAEIVII 74
Query: 69 IDR--SKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
S RD + V +E I PI ++ +N+S+ + FS
Sbjct: 75 CGEINSIRDGFES-----VIFPADKVKLEVIDPIR------RRQEINNNNSWKESDFSWI 123
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
D G + + + +I GI + + P++ + + I+L KG
Sbjct: 124 DKNNFSIDGITKYKKATKEELEGWKIRQGIPSFDKEM-NGETNPYELGLA--DTINLDKG 180
Query: 184 CYIGQEVVSRIQHRNIIRK--RPMIITGTDDLPPSGSPILTDD------IEIGTLGVVVG 235
CY+GQE +++ ++ R G +D G + +G + +
Sbjct: 181 CYLGQEAMAKFFRSKSLKYQLRYWEAYGANDNFQIGKKFFNTNKNEGYKKNVGVVTSSIR 240
Query: 236 K-----KALAIARIDKVDHAIKKGMALTVHGVRVKASFP 269
LA+ + + + +G + P
Sbjct: 241 VDDNFFNGLALIK----KTFLDHDFCFSENGDSITIKKP 275
>gi|223043146|ref|ZP_03613193.1| glycine cleavage system T protein [Staphylococcus capitis SK14]
gi|222443357|gb|EEE49455.1| glycine cleavage system T protein [Staphylococcus capitis SK14]
Length = 363
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 110/310 (35%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ E+ F+
Sbjct: 53 SHMGEIEITGNEAFNFVQYILSNDANNLTDTKAMYTALCNEEGGIIDDLVTYKLAENHFL 112
Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLR------SNVIIEIQPI 97
L ++ + D + + Y K R ++V + +
Sbjct: 113 LIVNAANTDKDFNWISKQSSNFDVNVNNSSNIYGQLAIQGPKARHLVNEHTDVDVSDMSM 172
Query: 98 NGV---VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ S S + E S V + + + + LR
Sbjct: 173 FEFKQDVKFFDKNIILSQSGYTGEDGFEIYCKSEDTVDIWNQLLEYDVVPCGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + ++
Sbjct: 233 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEEFIGKSVLKDQKENGSTKRT 285
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G + + IG + K++A+A I++ + K + +
Sbjct: 286 VGLEIIGKGIARTGYEVFDLEGNHIGEVTSGTQSPSSGKSIALAIINRDAFEMGKEVLIQ 345
Query: 259 VHGVRVKASF 268
V +VKA
Sbjct: 346 VRKRQVKAKI 355
>gi|170290799|ref|YP_001737615.1| glycine cleavage system T protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174879|gb|ACB07932.1| glycine cleavage system T protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 372
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 61/312 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A FLQ + +V + ++ + L +G I + ++ ++ +I
Sbjct: 49 SHMGRFIIEGTDASNFLQRATSNNVD-VEIGRSKYTLTLNERGGIRDDNVAFRLSDNKYI 107
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEHT------------- 109
++ + R ++ F +LR V I+ + + +
Sbjct: 108 FVVNAANRIKILSW--FDELRKKWDMNVRIDDVTLETFMFAIQGPRAREIFHNITGTQLK 165
Query: 110 ----------FSNSSFIDERFSIADVLLHRTWGHNEKIASDI--------------KTYH 145
+ I R + + ++ASD+
Sbjct: 166 IKKFNITTVNWRGEELIVSRTGYTGEDGYEVIMRDRELASDLFRSLVGAGAKPCGLVARD 225
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+V D P +A ++ + L K ++G+ ++ +R + R R
Sbjct: 226 ILRLEAGLVLYGNDI-DEDTNPIEAGLEF--AVDLEKD-FVGKGAITEAINRGVERVRVG 281
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTV 259
I++ T P G + + IG + + +A + + + G LTV
Sbjct: 282 IMSSTRSAPRRGEGVYMGEERIGIVTSGTFSPTIERGIGMAYIKKEYAE----IGKELTV 337
Query: 260 HG---VRVKASF 268
++V+
Sbjct: 338 GEERKLKVRVEK 349
>gi|16331260|ref|NP_441988.1| glycine cleavage system aminomethyltransferase T [Synechocystis sp.
PCC 6803]
gi|1707879|sp|P54261|GCST_SYNY3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|1001434|dbj|BAA10058.1| aminomethyltransferase [Synechocystis sp. PCC 6803]
Length = 372
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 104/307 (33%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ + G+ + LQ+++ +D+ L A+ + +L QG I+ ++
Sbjct: 55 SHMGKFVLTGQKVLAALQSLVPSDLDRLTPGKAQYTVLLNAQGGIIDDIIVYDQGKNPEG 114
Query: 62 EDTFILEIDRSK----RDSLIDKL----LFYKL-RSNVIIEIQPINGVV----------- 101
++ L ++ + + L++ L F L R V+I +Q +
Sbjct: 115 QERVTLIVNAATTVKDKQWLLEHLPEEIDFQDLSREKVLIALQGPEALTILQPLVDQNLG 174
Query: 102 ---LSWNQEHTFSNSSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYH 145
+ E F R L +T+G +
Sbjct: 175 ELPAFGHLEAEFLREKAFIARTGYTGEDGFEIMVSPEVGKQLWQTFGSKGVTPCGLGARD 234
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D P +A + L + +KG +IG+ V++ + + ++
Sbjct: 235 TLRLEAGMGLYGQDM-NDETTPLEAGLGWLVHLD-SKGDFIGRAVLTEQKANGVEKRLVG 292
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID--KVDHAIKKGMAL 257
+ + PIL + +G + AL + KV ++ +
Sbjct: 293 LEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPTELAKVGQELEVEVRG 352
Query: 258 TVHGVRV 264
+G++V
Sbjct: 353 KTYGIKV 359
>gi|123967836|ref|YP_001008694.1| aminomethyltransferase [Prochlorococcus marinus str. AS9601]
gi|123197946|gb|ABM69587.1| Predicted aminomethyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 278
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 99/250 (39%), Gaps = 22/250 (8%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70
+ GK A FL I T ++L + LTP G + L+ + + + IL +
Sbjct: 17 SITGKDARKFLNGITTGNILN-TENKVIKTCWLTPNGVLRSLIEIVFLERGLEVIILVGN 75
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
++ ++++F +V++ + + ++ ++ I + + +++
Sbjct: 76 TNEIIDYFNQIIFPA--DDVLLGEPSLINRIQEIDESSSWRTYQPIFFKIEDKEFEIYKN 133
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
N +D+K + +IN I + P + + L I KGCY+GQE
Sbjct: 134 -KLNLLNPNDLKLW---KINQAIPSLEMEI-NGKNNPLELGLQDL--IDFNKGCYLGQET 186
Query: 191 VSRIQHRNIIRKRPMIITGTD-----DLPPSGSPILTD-DIEIGTLG----VVVGKKALA 240
+S+I++ + +++ I + DL I + DI +G + K LA
Sbjct: 187 MSKIKNVSSLKQEIRIWKSIESNLNLDLKDKNLYINSAKDISVGKITSFFKSDCETKGLA 246
Query: 241 IARIDKVDHA 250
+ + +
Sbjct: 247 MIKRKYLKEE 256
>gi|314933710|ref|ZP_07841075.1| glycine cleavage system T protein [Staphylococcus caprae C87]
gi|313653860|gb|EFS17617.1| glycine cleavage system T protein [Staphylococcus caprae C87]
Length = 376
Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A F+Q I++ D L A +A+ +G I+ + K+ E+ F+
Sbjct: 66 SHMGEIEITGNEAFNFVQYILSNDANNLTDTKAMYTALCNEEGGIIDDLVTYKLAENHFL 125
Query: 67 LEIDRSKRDSLIDKLLF---------------Y--------KLR------SNVIIEIQPI 97
L ++ + D + + Y K R ++V + +
Sbjct: 126 LIVNAANTDKDFNWISKQSSNFDVNVNNSSNIYGQLAIQGPKARHLVNEHTDVDVSDMSM 185
Query: 98 NGV---VLSWNQEHTFSNSSFIDERF------SIADVLLHRTWGHNEKIASDIKTYHELR 148
V +++ S S + E S + + + + LR
Sbjct: 186 FEFKQDVKFFDKNIILSQSGYTGEDGFEIYCKSEDTADIWNQLLEYDVVPCGLGARDTLR 245
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D +I P++ GI+ + +IG+ V+ + ++
Sbjct: 246 LEAGLPLHGQDLT-ESITPYE------GGIAFAAKPLIEEEFIGKSVLKDQKENGSTKRT 298
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
+ + +G + + IG + K++A+A I++ + K + +
Sbjct: 299 VGLEIIGKGIARTGYEVFDLEGNHIGEVTSGTQSPSSGKSIALAIINRDAFEMGKEVLIQ 358
Query: 259 VHGVRVKASF 268
V +VKA
Sbjct: 359 VRKRQVKAKI 368
>gi|242398651|ref|YP_002994075.1| Probable aminomethyltransferase [Thermococcus sibiricus MM 739]
gi|242265044|gb|ACS89726.1| Probable aminomethyltransferase [Thermococcus sibiricus MM 739]
Length = 397
Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 53/340 (15%), Positives = 102/340 (30%), Gaps = 76/340 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ FLQ + T D+ P S +L +G + L+ + DT++
Sbjct: 49 SHMGEVFFKGKDALKFLQYVTTNDISRPPAISGTYSLVLNERGAVKDETLVFNMGNDTYM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-------NVIIEIQPINGVVLSWNQEHTFSNS------ 113
+ D + L K R+ ++ IE + + V+ S +
Sbjct: 109 MVCDSDAFEKLYAWFTSIK-RAIEQYTELDLEIENKTYDYVMFSIQGPKAKDLAMELFGI 167
Query: 114 ------SFIDERFSIADV--LLHRTWGHNEK----IASDIKTYHELRINHG--------- 152
F + + + LL R+ E D+ YH HG
Sbjct: 168 DINQLWWFQAKEVELDGIKMLLSRSGYTGENGFEVYFEDVNPYHPDESKHGKPEKALYVW 227
Query: 153 --IVDPNTDFLPS-------TIFPHDALMDLLN-------------------------GI 178
I++ + +A L I
Sbjct: 228 EKILEAGQKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEFAI 287
Query: 179 SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV---- 234
K +IG+E + + + R + K +P +G + D EIG +
Sbjct: 288 FWDKE-FIGKEALLKQKERGLPSKMVHFKMVDRGVPRAGYKVYADGKEIGEVTSGTLSPL 346
Query: 235 --GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+A + + ++ + + + P +Y
Sbjct: 347 LGIGIGVAFVKPEYAKPGVEIEIEVREQKKKALTVAPPFY 386
>gi|159039088|ref|YP_001538341.1| glycine cleavage system aminomethyltransferase T [Salinispora
arenicola CNS-205]
gi|157917923|gb|ABV99350.1| glycine cleavage system T protein [Salinispora arenicola CNS-205]
Length = 374
Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 87/296 (29%), Gaps = 47/296 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ +V G A F+ A ++ D+ + A+ + G ++ + +D
Sbjct: 63 SHLGKTRVTGPGAAEFVNACLSNDLTRIGPGRAQYTLCCDDATGGVVDDIIAYLYADDHV 122
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106
L + + ++ +L S V I + +L+
Sbjct: 123 FLVPNAANTAEVVRRLRAAAPPS-VTITDEHEAYAILAVQGPRSADLLDALGVPTGHDYM 181
Query: 107 ---EHTFSNSSFIDERFSIADVLLHRT---------------WGHNEKIASDIKTYHELR 148
T + ++ R L + E A + LR
Sbjct: 182 SFAPGTVAGANLTVCRTGYTGELGYELILPAAGAVPVWDALFATATELRACGLAARDTLR 241
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G D P I P A + K + G+ + + R+ ++
Sbjct: 242 TEMGYPLHGQDLSPD-ITPVQARSGW--AVGWNKPAFWGRAALLAEKSAGPRRRLRGLVA 298
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+P G + D +G + K+ +A+A ID + + G + V
Sbjct: 299 VDRAIPRPGMVVHHRDTPVGAITSGTFSPTRKQGIALALID-TEPGLDDGTEVEVD 353
>gi|78186284|ref|YP_374327.1| glycine cleavage system aminomethyltransferase T [Chlorobium
luteolum DSM 273]
gi|123730119|sp|Q3B5U7|GCST_PELLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78166186|gb|ABB23284.1| Glycine cleavage system T protein [Chlorobium luteolum DSM 273]
Length = 365
Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 91/270 (33%), Gaps = 48/270 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FLQ + T D+ A+ + +L P G I+ +I +I+ TF
Sbjct: 49 SHMGNFYVKGPRAEEFLQHMTTNDLSRAKNGQAQYNVMLYPNGGIVDDLIIYRIDAQTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
+ ++ + L + + V++E +++ F +
Sbjct: 109 IIVNAGNCEKDYQWLQEHAAEYDGVVLEDHSSAMSLIALQGPKAFDILKKVLPSLDAPSL 168
Query: 119 --------RFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF--- 160
+S A++++ RT E + + +L + G +
Sbjct: 169 GSFHFCTLEYSGAELMVARTGYTGEIGVEICMPNEMALPLWEDL-LEAGRPEGILPIGLG 227
Query: 161 -----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ P +A + + + L KG +IG+E +++
Sbjct: 228 ARDTLRLEMGYSLYGHEIDQDTNPLEARLKWV--VKLDKGHFIGREACLQVELNPKRSVA 285
Query: 204 PMIITGTDDLPPSGSPILTDD-IEIGTLGV 232
++ G LP G + D EIG +
Sbjct: 286 GFVLEGR-ALPRQGCKLFNSDHQEIGRVCS 314
>gi|84498272|ref|ZP_00997069.1| putative dehydrogenase protein [Janibacter sp. HTCC2649]
gi|84381772|gb|EAP97655.1| putative dehydrogenase protein [Janibacter sp. HTCC2649]
Length = 822
Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 90/275 (32%), Gaps = 54/275 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A LQ + TADV +P +A+L +G ++++ F++ +
Sbjct: 502 VAGADAASTLQWLCTADVD-VPVGRTVYTAMLNARGTYEADVTVTRVGAQEFLVVSSAAT 560
Query: 74 RDSLIDKLLFYK-LRSNVIIEIQ-----------PINGVVLSWNQEHTFSNSSFI----- 116
D +D + + + + V + P + +LS FS+++F
Sbjct: 561 TDRDLDWMRRHAPIGAAVTVTDLTSAMAVFGVMGPRSRELLSALSPDDFSDTAFPFATSR 620
Query: 117 DERFSIADVLLHRT-----WGHNEKIASDIKTY------------------HELRINHGI 153
D R A V R G + +D+ +R+ G
Sbjct: 621 DVRLGRATVRATRITYVGELGWELYVPTDLAAGVFGGVGGVEVVPAGYYAIEAMRLEKGY 680
Query: 154 VDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIIT 208
+ P +A + L I +G+E V R + R R+ +++
Sbjct: 681 RAFARELTTD-WGPVEAGLTFACKLRTSIDF-----LGREEVERAKARGPERRVASVVVA 734
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
G +L D + G + A+ R
Sbjct: 735 DPTAYLWGGELVLRDGLPAGQVTSA--GWGAALGR 767
>gi|56709093|ref|YP_165138.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
gi|56680778|gb|AAV97443.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
Length = 799
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 57/278 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A FL + A + + + IL +G + + + +T+++ +
Sbjct: 494 IMVQGPDACTFLNRLCAAQMD-IAEGRIAYTQILNARGGVESDLTVQRHGPETYLMIVGA 552
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-----------RF 120
+ + + + R + +E + + T + RF
Sbjct: 553 GEVVRDMKR--MRETRGDFRVEFTDVTSGYAAIGLAGTKAREVLQATTNTPVPDLKRFRF 610
Query: 121 SIADVLLHRTW----------------------GHNEKIASDIKTYH------ELRINHG 152
+ ++ L R W +E + + T+ LRI G
Sbjct: 611 APVEIGLARGWAGRLSFTGEEGYELYVPSDMAMAAHEALVAAGATHAGLFASGSLRIESG 670
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ P T P +A + G ++GQ ++ ++R + + D
Sbjct: 671 FRAFGHELTPGTT-PQEAGLGAFCA--FGTG-FVGQGALANA---GSPKRRVVSLLFDDP 723
Query: 213 --LPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+P PI D +G + ALA+
Sbjct: 724 NAMPIHDEPIYYDGRVVGQITSAAWSYRFGRSVALAMI 761
>gi|254410465|ref|ZP_05024244.1| glycine cleavage system T protein [Microcoleus chthonoplastes PCC
7420]
gi|196182671|gb|EDX77656.1| glycine cleavage system T protein [Microcoleus chthonoplastes PCC
7420]
Length = 374
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 54/269 (20%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT------------------ 64
LQ ++ +D+ L A+ + +L PQG I+ ++ ED
Sbjct: 72 LQRLVPSDLSRLQPGQAQYTVLLNPQGGIIDDVIVYHKGEDETGESQAMMIVNAATCQKD 131
Query: 65 ----------------------FILEIDRSKRDS-----LIDKLLFYKLRSNVIIEIQPI 97
++ + S+ ++ + + L K ++ I
Sbjct: 132 KEWLLAQLENTEVKLLDLSQENILIALQGSQAETYLQPFVQEDLTSLKSFGHLNATILDQ 191
Query: 98 NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
G + + V L R + LR+ G+
Sbjct: 192 PGFIARTGYTGEDGFEVMVKPE---VGVQLWRRLFQAGVTPCGLGARDTLRLEAGLALYG 248
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
D T P +A + L + KG +IG+ V+ + + R+ I + G
Sbjct: 249 QDI-DDTTTPLEAGLSWLVHLD-RKGDFIGRSVLEAQKANGVERRLVGIEMQGRHIARHG 306
Query: 218 SPILTDDIEIGTLGVVVG----KKALAIA 242
+L++ +G + +A+A+A
Sbjct: 307 YSVLSEGQVVGEITSGTYSPTLGRAIALA 335
>gi|114706121|ref|ZP_01439024.1| putative aminomethyltransferase protein [Fulvimarina pelagi
HTCC2506]
gi|114538967|gb|EAU42088.1| putative aminomethyltransferase protein [Fulvimarina pelagi
HTCC2506]
Length = 790
Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 103/310 (33%), Gaps = 62/310 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G + LQ +T D+ L SA+ P G ++ + ++ E+ F
Sbjct: 457 LSALRKFEVTGPDSERLLQHCLTRDMKRLSIGQVAYSAMCYPHGGMVDDGTVFRLGENNF 516
Query: 66 ILEIDRS--------KRDSLIDKL---------LFYKL-----RSNVIIE---------- 93
+ ++L KL + + RS I+E
Sbjct: 517 RWICGSDASGIWLREQAEAL--KLDVWVRSSTDQMHNIAVQGPRSRDILEKFVWTSPTQP 574
Query: 94 -IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------- 139
+Q + + + TF + R L + + H +
Sbjct: 575 TLQELGVFRFTIGRLETFDGRPIVVSRTGYTGELGYEIFCHPTDAEAVFDAVWEAGKPFE 634
Query: 140 ----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
++ +RI G+V +F T P +A + + ++G+ V+ +
Sbjct: 635 LTPFGLEALDMVRIEAGLVFAGYEFCDQT-NPLEAGIGFTVPLKSKPDDFVGRSVLE--E 691
Query: 196 HRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
+ ++ + + L PS G+ + ++G + V K +A+ RID
Sbjct: 692 RKAHPNRQLVGLDLDGSLVPSHGACVRIGQAQVGEITSAVRSPILGKVIALCRIDATHAE 751
Query: 251 IKKGMALTVH 260
+ G + V
Sbjct: 752 V--GTEVEVG 759
>gi|27366646|ref|NP_762173.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6]
gi|27358212|gb|AAO07163.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6]
Length = 381
Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 103/311 (33%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL++++ D+ L R + QG I+ +++ + D
Sbjct: 63 SHMGQLRLHGAGAAAFLESLVPVDIADLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + ++ I+ L + + S+V +EI ++ + S F +
Sbjct: 122 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 180
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L E + LR+
Sbjct: 181 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 240
Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204
G+ D T P +A + + +G + G +++ + I+ +++ RKR
Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 299
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257
++ T G+ + ++G + ++A R D + + +
Sbjct: 300 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 359
Query: 258 TVHGVRVKASF 268
+ +
Sbjct: 360 RGKLLPMTVEK 370
>gi|37676356|ref|NP_936752.1| glycine cleavage system T protein [Vibrio vulnificus YJ016]
gi|37200898|dbj|BAC96722.1| glycine cleavage system T protein [Vibrio vulnificus YJ016]
Length = 381
Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 104/311 (33%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL++++ D++ L R + QG I+ +++ + D
Sbjct: 63 SHMGQLRLHGAGAAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + ++ I+ L + + S+V +EI ++ + S F +
Sbjct: 122 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 180
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L E + LR+
Sbjct: 181 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 240
Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204
G+ D T P +A + + +G + G +++ + I+ +++ RKR
Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 299
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257
++ T G+ + ++G + ++A R D + + +
Sbjct: 300 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 359
Query: 258 TVHGVRVKASF 268
+ +
Sbjct: 360 RGKLLPMTVEK 370
>gi|84685725|ref|ZP_01013622.1| sarcosine dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84666391|gb|EAQ12864.1| sarcosine dehydrogenase [Rhodobacterales bacterium HTCC2654]
Length = 815
Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 48/279 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A+ FLQ + D+ + + +L +G I ++++ E F
Sbjct: 489 MTSFGKIRVEGRDALAFLQRLCANDMD-VAVGRIVYTQMLNGRGGIECDLTVTRLSETVF 547
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
L + + + L + V I + V+ N
Sbjct: 548 FLVVPGATLQRDLVWLRRHLGDEWVTITDVTASEAVIPIMGPRARDLLARVSPNDLSNDA 607
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142
H F + R + L + ++ A +
Sbjct: 608 HPFGMAREIEIGMGLARAHRVTYVGELGWELYVSTDQAAHVFEAIAEAGADVGLKLCGLH 667
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D +A + + KG +IG++ V + + R+
Sbjct: 668 AMDSCRIEKGFRHFGHDITDEDHV-LEAGLGF--AVKTDKGDFIGRDAVLSKREAGLDRR 724
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+T + L PIL D + L AL
Sbjct: 725 MLQFKLTDPEPLLFHNEPILRDGKIVSFLTSGNYGHALG 763
>gi|289208881|ref|YP_003460947.1| glycine cleavage system protein T [Thioalkalivibrio sp. K90mix]
gi|288944512|gb|ADC72211.1| glycine cleavage system T protein [Thioalkalivibrio sp. K90mix]
Length = 365
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 92/302 (30%), Gaps = 40/302 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A FL+ ++ DV L A S +L G ++ +I D++
Sbjct: 51 SHMQVVDIHGPQAQAFLRYLLANDVAKLKTEGRALYSCMLNEAGGVIDDLIIYWTGGDSY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++ + + I + + +E +P ++ + + E A
Sbjct: 111 RAVVNAATAEGDIAHMQQVVKGFDANVEPRPEFALIAIQGPQAVEKTLPLLPEDLRSAGD 170
Query: 126 LLHRTWGHNEKIASDIKTY-----------------------------------HELRIN 150
L + N+ Y LR+
Sbjct: 171 LKPFSAVWNDSWFVARTGYTGEDGFEVMLPEAEADGFWEQLKDAGVNPIGLGARDTLRLE 230
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ TD T P A + + + +IG++ + + + + + ++
Sbjct: 231 AGMNLYGTDMDDQT-NPLTANLGWTIALKDAERDFIGRKAIEQWKAEGVPERMVGLVLEG 289
Query: 211 DDLPPSGSPI-LTDDIEIGTLGVVVGKKA--LAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ G+ I + T G +A ARI A + + + V+
Sbjct: 290 RGVLRGGTRIETAAGDGVVTSGSFSPSLGVSVAFARIPAAVDAEELQADIRGRMLPVRVV 349
Query: 268 FP 269
P
Sbjct: 350 KP 351
>gi|310799208|gb|EFQ34101.1| FAD dependent oxidoreductase [Glomerella graminicola M1.001]
Length = 834
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 52/270 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ LQ + T+D+ + +L G I ++++ D F L ++
Sbjct: 505 LEVSGPGAVELLQRLTTSDISK-SPGTVTFTLLLDGHGGIRSDIFVARLGNDLFQLAVNG 563
Query: 72 SKRDSLIDK----------LLFYKLR----------------SNVIIEIQ---------- 95
+ + + F ++R ++VI I
Sbjct: 564 PVDFAYLSREARIQAEASPAKFVQVRDTTGGSGGIGLWGPRAADVIGGISSDNLKDMPPS 623
Query: 96 ----------PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
P+ V LS+ E + + + + D L + + IA+ +
Sbjct: 624 RVKSAIIAGIPVTVVSLSFVGEPGWEIYTSAENSLRLWD-TLWQAGKPHGVIAAGRAAFS 682
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204
LR+ G D + S P +A ++ + + K Y+G + + R+ + R+ R
Sbjct: 683 ALRLETGFRTYGAD-VTSEHNPFEAGLE--SAVDPEKQGYVGHDAIKRLSKEKVSRRLRC 739
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ I + P+ D +G +
Sbjct: 740 LTIDDGRSVVLGKEPVFLDGKAVGYVTTAA 769
>gi|153005382|ref|YP_001379707.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter
sp. Fw109-5]
gi|152028955|gb|ABS26723.1| glycine cleavage system T protein [Anaeromyxobacter sp. Fw109-5]
Length = 360
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 60/312 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ L + T D+ + A+ + G I+ ++ + D +
Sbjct: 50 SHMGEVVFRGPRALEALSRLFTNDLSKVADGQAQYGCLCRESGGIVDDVVVYRRAADDLL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
+ ++ + R + L + + + + L+ ++ + +R + AD+
Sbjct: 110 VCVNAANRQKDHEWLAGHA--AGADVRNESDEWAQLALQG----PLAARVLQRLTSADLP 163
Query: 127 LHRTWGHNE-------------------------KIASDIKTYHELRINHGIVDP----- 156
RT+ + + + + ++ G +
Sbjct: 164 AIRTYRFARGEVAGVPCLIARTGYTGEDGFELFCPPDAAARLWDAV-VDSGEPEGLQPCG 222
Query: 157 ----------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+D T P +A + + + L KG ++G++ + R + + +
Sbjct: 223 LGARDSLRLEMAYRLYGSDMDDGTT-PLEAGLGWV--VKLDKGEFVGRDALVRQKEQGLA 279
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256
RK + + G P++ D ++G + +L +A + A A
Sbjct: 280 RKLVGFVLTDPGIARHGYPVVQDGRKVGEVTSGTRSPSLGTSIGLAYVPPALAAEGSTFA 339
Query: 257 LTVHGVRVKASF 268
+ + G A
Sbjct: 340 VEIRGRPAAAKV 351
>gi|292656530|ref|YP_003536427.1| glycine cleavage system protein T [Haloferax volcanii DS2]
gi|291370158|gb|ADE02385.1| aminomethyltransferase (glycine cleavage system protein T)
[Haloferax volcanii DS2]
Length = 363
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 52/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---IEED 63
S+ S I+V G A +Q + T DV L ++ SAI+ +G I+ ++ + +E
Sbjct: 51 SHMSEIEVSGPDATALMQRLTTNDVTALEPGDSQYSAIVNDEGVIVDDTVVYRLPDRDER 110
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
++ + + + D+ ++ + +E + + + + + +
Sbjct: 111 VYLFVPNAGHDEEMYDRWTSFRDDWDLDATVEDVTEDWAMFAVQGPDALDSVTDAAPDAA 170
Query: 122 IADV---------------LLHRT--------------------WGHNEKIASDIKTYHE 146
+ D+ + RT W E + +
Sbjct: 171 LGDLSKFQATFADVAGVECWVARTGYTGEDGFELLCPWADAETVWAALEATPCGLGSRDT 230
Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G + DF P T P++A + + + ++G++ + R + +
Sbjct: 231 LRLEMGYLLSGQDFDPETEPRTPYEAGIGFVVDLDTE---FVGRDALERRREAGVEETFV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEI------GTLG-VVVGKKALAIARIDKVDHAIKKGMAL 257
+P G I D E+ GT+ + L ++ D + + +
Sbjct: 288 GFALLDRGVPRHGYDIANSDGEVIGVVTSGTMSPTLSEPIGLGYVPVEYADDETEVSVLV 347
Query: 258 TVHGVRVKASFPH 270
R P
Sbjct: 348 RGREKRAVIVTPP 360
>gi|288817925|ref|YP_003432272.1| aminomethyltransferase [Hydrogenobacter thermophilus TK-6]
gi|288787324|dbj|BAI69071.1| aminomethyltransferase [Hydrogenobacter thermophilus TK-6]
gi|308751523|gb|ADO45006.1| glycine cleavage system T protein [Hydrogenobacter thermophilus
TK-6]
Length = 339
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 48/297 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G SA+ L + T V L + S I QG ++ + +++++F+
Sbjct: 48 SHMGRILMKGPSALETLDYLTTNHVKKLSPGKVQYSMITNHQGGVVDDITLYMLDQESFM 107
Query: 67 LEIDRSKRDSLIDKLLFY-------------KLRSNVIIEIQPI---------------N 98
L I+ + R +I+ L Y L+ +++ +
Sbjct: 108 LCINAANRKKVINWLSKYHHVEDISGSTLQLALQGKKSVDVLSALFPVGEIKRYNFKVFD 167
Query: 99 GVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
G+++S + E F + I E I L+ + LRI G+
Sbjct: 168 GIIVSRTGYTGEDGFEIYASIKEGLGIFKELIKY------AKPCGLGARDVLRIEAGLPL 221
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+ I P +A +D ++G+ S + R I RK + +P
Sbjct: 222 YGHEI-SEDITPFEANLDRFVCTDKD---FLGK---SAMLKREIHRKLFGLELLQRGVPR 274
Query: 216 SGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
I D+EIG + K +A+ +D + L V G R+KA
Sbjct: 275 EDYRIYLSDMEIGRVSSGTYSPTLDKGIALCFVDISFRKEGLEVELDVRGKRLKALL 331
>gi|320158537|ref|YP_004190915.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
vulnificus MO6-24/O]
gi|319933849|gb|ADV88712.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
vulnificus MO6-24/O]
Length = 377
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 104/311 (33%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL++++ D++ L R + QG I+ +++ + D
Sbjct: 59 SHMGQLRLHGAGAAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + ++ I+ L + + S+V +EI ++ + S F +
Sbjct: 118 VVVNAACKEQDINHLQAH-IPSDVELEIIDDRALLAIQGPKAVEVLSRFQPAVAEMLFMD 176
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L E + LR+
Sbjct: 177 VQKLELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSLRLE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204
G+ D T P +A + + +G + G +++ + I+ +++ RKR
Sbjct: 237 CGLCLYGHDL-DETTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 295
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257
++ T G+ + ++G + ++A R D + + +
Sbjct: 296 GLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAGKPVSMAYLRSDLTEIGTEVFAEV 355
Query: 258 TVHGVRVKASF 268
+ +
Sbjct: 356 RGKLLPMTVEK 366
>gi|332706646|ref|ZP_08426707.1| aminomethyltransferase [Lyngbya majuscula 3L]
gi|332354530|gb|EGJ34009.1| aminomethyltransferase [Lyngbya majuscula 3L]
Length = 385
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 94/286 (32%), Gaps = 50/286 (17%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFILE----IDRS 72
LQ+++ +D+ L A+ + +L P G I+ + E+ ++ +
Sbjct: 81 LQSLVPSDLTRLQPGQAQYTVLLNPNGGIIDDIIFYYQGEEESGEQRGMMIVNGATCTKD 140
Query: 73 KRDSLIDKLLFYKL------RSNVIIEIQPING--------------VVLSWNQEHTFSN 112
+D L+ L + S V+I +Q V + E T
Sbjct: 141 -KDWLLAHLDADSVTLQDLSTSKVLIAVQGPLAISHLQPFVKEALAPVKAFGHLEATVLG 199
Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
R + L + + LR+ + D
Sbjct: 200 KPAFIARTGYTGEDGFELMLDPDVGIELWHKLLESGVTPCGLGARDTLRLEAAMALYGQD 259
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
T P +A + L + +KG +IG+ V+ + + I RK I + G P
Sbjct: 260 I-DDTTTPLEAGLGWLVHLD-SKGDFIGRSVLEQQKATGIERKLVGIQMQGRQIARHGYP 317
Query: 220 ILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+L D +G + A+A+A + + + + + + + G
Sbjct: 318 VLADGEVVGVVTSGTLAPTLGNAIALAYVPRKLGKVGQQLEVEIRG 363
>gi|220917813|ref|YP_002493117.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955667|gb|ACL66051.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 360
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 46/303 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G AI L + T D+ + A+ + G I+ ++ + + +
Sbjct: 50 SHMGEVVFRGPRAIAALGRLFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRSAEDLL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119
+ ++ R + L + ++V E + L T + S+ R
Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169
Query: 120 FSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVD-------PNTDF 160
F +V R + + + L + G+ + D
Sbjct: 170 FGEGEVAGVRCIVARTGYTGEDGFELFCRSDLGPRLWDAL-MEAGVPERIAPCGLGARDS 228
Query: 161 L-------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L T P +A + + + L KG +IG+E + + + + + RK
Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGDFIGREALLKQKEQGLSRKLVGFQ 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G P+L D ++G + A+ +A + A A+ + G
Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGDVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346
Query: 264 VKA 266
A
Sbjct: 347 AAA 349
>gi|289434629|ref|YP_003464501.1| glycine cleavage system T protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170873|emb|CBH27415.1| glycine cleavage system T protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 362
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 47/311 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + +LQ +++ D+ + A+ + + G + ++ KI E +I
Sbjct: 52 SHMGEVLVEGSDSTAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKITETKYI 111
Query: 67 LEIDRSKRDSLIDKL--------------LFYKLRS-------NVIIEIQPIN---GVVL 102
L ++ + + + + Y + ++ ++ ++
Sbjct: 112 LVVNAANTEKDYEWMVKNVFGNVTVTNVSSMYGQLALQGPNAEKILTKLTDVDLSSISFF 171
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-------------IASDIKTYHELRI 149
+ ++ + I R + ++ + + LR+
Sbjct: 172 GFVEDANVAGVKTIISRSGYTGEDGFEIYMQSDDAIKVFEAIMAEGVLPIGLGARDTLRL 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
+ + I P +A ++ + L K +IG+E + + + + RK I
Sbjct: 232 EAVLALYGQEL-SQDITPLEAGLNF--AVKLKKEADFIGKEALVKQKEAGLTRKLVGIEL 288
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGV 262
+P + +D +IG + LA+ + + + + +
Sbjct: 289 IERGIPRHDYSVFQNDKKIGIITSGTQSPTLGTNIGLALLETPYTELGQEVEVGIRTKKI 348
Query: 263 RVKASFPHWYK 273
+ K +YK
Sbjct: 349 KAKVIATPFYK 359
>gi|149915485|ref|ZP_01904012.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. AzwK-3b]
gi|149810774|gb|EDM70615.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. AzwK-3b]
Length = 815
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 100/314 (31%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G A FL + AD+ ++P + L P+G I ++++ + +
Sbjct: 490 MSSFGKLRVEGPEAEAFLNHVCGADI-SVPVGRIVYTQFLNPRGGIEADVTVTRLSDTAW 548
Query: 66 ILEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ----------EHTFSNSS 114
++ + R + L + R VI ++ V+ FSN +
Sbjct: 549 LVVTPAATRLADETWLRRHLFWRMAVITDVTAAEAVLAVMGPKARDVMRAVSPDDFSNDA 608
Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144
R S L + + +T
Sbjct: 609 HPFGMARQIEIGMALARAHRVSYVGELGWEIYISADMAGHVFETLIEAGADHGLKLCGMH 668
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D +A + +S TK +IG++ V+R + + +
Sbjct: 669 VMDSCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVSKTKPDFIGRDAVARKRDAGLDTR 725
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDHAIKK 253
+T D L PIL D +G L G L + + D +
Sbjct: 726 MMQFRLTDPDPLLYHNEPILRDGQIVGFLSSGSYGHHLGGAIGLGYVPCKGETPDQLLAS 785
Query: 254 GMALTVHGVRVKAS 267
+ V G RV+A
Sbjct: 786 SYEIDVAGTRVQAE 799
>gi|15827390|ref|NP_301653.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
leprae TN]
gi|221229867|ref|YP_002503283.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
leprae Br4923]
gi|11132073|sp|O32955|GCST_MYCLE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797878|sp|B8ZQK6|GCST_MYCLB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|2342607|emb|CAB11378.1| aminomethyltransferase [Mycobacterium leprae]
gi|13092940|emb|CAC31246.1| putative aminomethyltransferase [Mycobacterium leprae]
gi|219932974|emb|CAR70960.1| putative aminomethyltransferase [Mycobacterium leprae Br4923]
Length = 367
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 109/312 (34%), Gaps = 48/312 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ +++T D+ + A+ + + G ++ + +++D
Sbjct: 55 SHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++D L RS+ ++ +Q V+ +
Sbjct: 115 LVSNAANTAAVVDALQAVVPAGLTIINQHRSHAVLAVQGPRSTDVLGELGLPTGIDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRI-----NHGIVDPNTD---------FL 161
+D ++ V + RT E+ + + + +VD +
Sbjct: 175 VDASYAGVPVRVCRTGYTGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLR 234
Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITG 209
+P H+ +D+ I K ++G++ + + R+ R + + G
Sbjct: 235 TEMGYPLYGHELSLDISPLQARCGWAIGWKKDAFLGRDALLAEKAAG-PRRLLRGLRMAG 293
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH----G 261
L P G + DI IG +A+A ID + A++ G + V
Sbjct: 294 RGVLRP-GLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDS-EAAVQDGQQIIVDVRGRA 351
Query: 262 VRVKASFPHWYK 273
V + P + +
Sbjct: 352 VECEVVRPPFIE 363
>gi|300778775|ref|ZP_07088633.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910]
gi|300504285|gb|EFK35425.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910]
Length = 358
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 99/313 (31%), Gaps = 54/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + LQ + T +V TL A+ S + G I+ ++ K+E+D +
Sbjct: 49 SHMGQFFIEGPGSKDLLQFVTTNNVDTLENGKAQYSCLPNENGGIVDDLIVYKMEDDKYF 108
Query: 67 LEIDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHT---------------- 109
+ ++ S D + + Y + + ++ + T
Sbjct: 109 VVVNASNIDKDWNHISKYNTFGAKMT-NASDEMSLLAVQGPKATEILQKLTDVNLSEIPY 167
Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHE------------------ 146
F+ S E I + G E K S K +
Sbjct: 168 YHFTVGSVAGENDVIISNTGYTGSGGFEIYFKNESAEKLWDAVMEAGQEEGIIPCGLAAR 227
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D T P +A + + K ++ ++V ++ + + RK
Sbjct: 228 DTLRLEKGFCLYGNDI-DDTTSPIEAGLGWI--TKFDKD-FVSKDVFAKQKEEGVSRKLV 283
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+P P++ + IG + K L +A +DK + + + V
Sbjct: 284 GFELTDKGVPRHDYPVVDAEGNVIGKVTSGTQSPMKKVGLGLAYVDKPHFKLGSEIFIQV 343
Query: 260 --HGVRVKASFPH 270
+ K
Sbjct: 344 RNKNIPAKVVKAP 356
>gi|126695638|ref|YP_001090524.1| GcvT-like aminomethyltransferase [Prochlorococcus marinus str. MIT
9301]
gi|126542681|gb|ABO16923.1| Predicted GcvT-like aminomethyltransferase [Prochlorococcus marinus
str. MIT 9301]
Length = 278
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 48/262 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK A FL + T++++ + LTP G + I +E + F + I
Sbjct: 17 SITGKDARKFLNGLTTSNIID-SENKVIKTCWLTPNGVLRALIEIIFLERN-FEIIILAG 74
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTW 131
+ +I+ I P++ V LS F+ R D RT+
Sbjct: 75 NTNEIINYFNQI---------IFPVDNVFLS---------EPFLINRIQEIDESCSWRTY 116
Query: 132 G--------------HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
N+ + L+IN I + P + + L
Sbjct: 117 QPIFFKTDDKEFEIYKNKLNLLNPNDLKLLKINQAIPSLGMEI-NGKNNPLELGLKDL-- 173
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMI---ITGTDDLPPSGSPILTD---DIEIGTLG 231
I KGCY+GQE +S+I++ + +++ + +L + + DI +G +
Sbjct: 174 IDFNKGCYLGQETMSKIKNVSSLKQEIRTWKSLESNLNLDVEDKNLYINSAKDISVGKIT 233
Query: 232 ----VVVGKKALAIARIDKVDH 249
K LA+ + ++
Sbjct: 234 SFFKSDSQIKGLAMIKRKYLEE 255
>gi|291534242|emb|CBL07355.1| aminomethyltransferase [Megamonas hypermegale ART12/1]
Length = 365
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 103/308 (33%), Gaps = 52/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G+ A+ + +++ D L AR S + QG ++ ++ K E +
Sbjct: 54 SHMGEIICEGEDALANINMLLSNDYTDLDINHARYSPMCNEQGGVVDDLIVYKQHEHKYF 113
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPI-------NGVVLSWNQEHTFSN--- 112
+ ++ + +D + + S+V E + ++ E
Sbjct: 114 IVVNAANKDKDFAWMKAHAFGDVKFSDVSAEYAQLALQGPKSEHILAQVTDEKNIPQKYY 173
Query: 113 SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTYH 145
+ D + D ++ RT E I +
Sbjct: 174 TCIFDAKIDDIDCIISRTGYTGEDGFEIYVASKYAPAIWNLLLENGKEDGLIPCGLGARD 233
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + + I P +A + + + + K +IG+ S ++ + +R +
Sbjct: 234 TLRLEAAMPLYGHEM-NDEISPKEAGLGIF--VKMDKPDFIGK---SALEQKGAPTRRRV 287
Query: 206 IITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+ T + + D +IG K+A+A+A +D + + + V
Sbjct: 288 GLKVTGKGIIREAQDVYIDGEKIGITTSGTHCPYLKQAVALAIVDVAHKDVGTKVQVDVR 347
Query: 261 GVRVKASF 268
G V+A
Sbjct: 348 GRMVEAEI 355
>gi|110596895|ref|ZP_01385185.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM
13031]
gi|110341582|gb|EAT60042.1| glycine cleavage system T protein [Chlorobium ferrooxidans DSM
13031]
Length = 365
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 89/278 (32%), Gaps = 50/278 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ FLQ++ T D+ A+ + +L P G I+ +I +I+ +TF
Sbjct: 49 SHMGNFYVRGKRALEFLQSVTTNDISKAKDGQAQYNLMLYPSGGIVDDLIIYRIDSETFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE------------------ 107
L ++ S L + V++E +++
Sbjct: 109 LIVNASNAPKDYAWLQEHIGAFDGVVLEDHTDRLSLIALQGPLALNILSRVFPSAEVNSL 168
Query: 108 -------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------- 144
F+ S I R NE+ +
Sbjct: 169 GSFHFCSALFNGSEAIIARTGYTGEQGVEICLSNEQAQPLWEALMEAGKEDGIQPIGLGA 228
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + P +A + + + + KG +IG+E + Q + +++
Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VKMDKGHFIGRE--ACQQVESNLQRG 283
Query: 204 PMIITGTDD-LPPSGSPILTDDI-EIGTLGVVVGKKAL 239
+ LP + D EIG + L
Sbjct: 284 VAGFSLEGRVLPRQHFKVYNSDRQEIGWVCSGTQSPTL 321
>gi|258405679|ref|YP_003198421.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM
5692]
gi|257797906|gb|ACV68843.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM
5692]
Length = 359
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 53/301 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L I+T ++ L +LTP+G + ++ ++ED F+L ++ +
Sbjct: 58 RITGPGARDGLDRIVTHNLERLRPGRCSYGFLLTPEGTVQDDLIVYCLDEDDFMLVVNAA 117
Query: 73 KRDSLIDKLLFYKLRSNV----------IIEIQPINGVVL-------SWNQ-------EH 108
+++ L + L + V I++Q + +W +
Sbjct: 118 CQETDFTWLREH-LPAGVAFEDISEATAKIDLQGPTSIAALERVLPGAWRELKFFGHCPS 176
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINHGIV 154
+F S R L + + E+ S + + LR+ G++
Sbjct: 177 SFGGQSLRVSRTGYTGELGYEIYLPREQAVSLWEQFLDGEDVKPAGLGARDTLRLEAGLL 236
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D P +A G+ ++ YIG++ ++ + + + G
Sbjct: 237 LYGQDLDREHT-PAEAGYA---GMLTSQAPYIGKDNALTVRDKLVA----LQFEGRRTAH 288
Query: 215 PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ + +GT+ LA + D D S
Sbjct: 289 HHDTVLDASGAPVGTITSASFAPSLGHAIGLAYIQADAADQDQYTVQTKRAALTATVTSL 348
Query: 269 P 269
P
Sbjct: 349 P 349
>gi|84496121|ref|ZP_00994975.1| aminomethyltransferase [Janibacter sp. HTCC2649]
gi|84382889|gb|EAP98770.1| aminomethyltransferase [Janibacter sp. HTCC2649]
Length = 370
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 62/317 (19%)
Query: 7 SNQSFIKVCG----KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ +V G SAI F+ + +T D+ + A+ + G ++ + E
Sbjct: 54 SHLGKARVSGRAGDVSAIDFVNSCLTNDLRRIGPGQAQYTLCCQDDGGVVDDLIAYVRSE 113
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVI--IEIQPINGVVLSWNQEHTFSNS------- 113
D L + + +++D L R+ IE++ ++ + + S+
Sbjct: 114 DDVFLIPNAANTAAVVDLL-----RAAAPEGIEVENLHDAYAVFAVQGPKSDEVLTSLGL 168
Query: 114 -------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------------- 146
SF++ + V++ RT E+ + +
Sbjct: 169 PVDHDYMSFVETEWQGLPVIVCRTGYTGERGYELVPAWDAAGSLWDALASAVADQSGMPA 228
Query: 147 -------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
LR G D I P A + K + G+E ++ +
Sbjct: 229 GLGARDTLRTEMGYPLHGNDLSTE-ITPVMAGAAW--AVGWDKDTFWGKEALAEQRAAKT 285
Query: 200 IR-KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDK-VDHAIKK 253
R R +++TG +P + +L D +G + K+ +A+A++++ V +
Sbjct: 286 SRLNRGLVVTGRG-IPRAHCSVLKDGEVVGEVTSGTFSPTRKEGIALAQLERSVAIGDEV 344
Query: 254 GMALTVHGVRVKASFPH 270
+ + + + P
Sbjct: 345 VIDVRGREIPATVTKPP 361
>gi|197123023|ref|YP_002134974.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter
sp. K]
gi|196172872|gb|ACG73845.1| glycine cleavage system T protein [Anaeromyxobacter sp. K]
Length = 360
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 46/303 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ L + T D+ + A+ + G I+ ++ + + +
Sbjct: 50 SHMGEVVFRGPRALAALGRLFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRSAEDLL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119
+ ++ R + L + ++V E + L T + S+ R
Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169
Query: 120 FSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVD-------PNTDF 160
F +V R + + + L + G+ + D
Sbjct: 170 FGEGEVAGVRCIVARTGYTGEDGFELFCRADLGPRLWDAL-MEAGVPERIAPCGLGARDS 228
Query: 161 L-------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
L T P +A + + + L KG +IG+E + + + + + RK
Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGEFIGREALLKQKEQGLSRKLVGFQ 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G P+L D ++G + A+ +A + A A+ + G
Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGDVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346
Query: 264 VKA 266
A
Sbjct: 347 AAA 349
>gi|160879683|ref|YP_001558651.1| glycine cleavage system T protein [Clostridium phytofermentans
ISDg]
gi|160428349|gb|ABX41912.1| glycine cleavage system T protein [Clostridium phytofermentans
ISDg]
Length = 360
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 102/308 (33%), Gaps = 54/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+ GK A+ LQ ++T D + AR S + QG + ++ K +E+ ++
Sbjct: 51 SHMGEIRCSGKDALRNLQQLLTNDFTDMSDGQARYSPMCNEQGGTVDDLIVYKKKEEEYL 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ S ++ +L +K V+ E ++ +
Sbjct: 111 IVVNASNKEKDYHWMLEHK-FGEVVFEDISDKISQIALQGPKSQEILMKLSTDIPEKYYH 169
Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146
+ + R + N E + K Y
Sbjct: 170 AVFDGMVAGIPCMISRTGYTGEDGFELYLDNTYAKTMWETLMEAGKEYGLIPCGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ + I P + + + + K +IG++ + +++RKR +
Sbjct: 230 LRLEAGMPLYGHEM-NDEINPVETGLSF--AVKMQKEDFIGKDHLP--DKDSLMRKRVGL 284
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260
+ +L D ++G A+AI + + K + + V
Sbjct: 285 RVTGRGIIREQEDVLVDGKKVGFTTSGTHCPYLGYPVAMAILNKEYIKVGTK--VTVIVR 342
Query: 261 GVRVKASF 268
G V+A
Sbjct: 343 GREVEAEV 350
>gi|325525326|gb|EGD03173.1| glycine cleavage system T protein [Burkholderia sp. TJI49]
Length = 372
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/303 (16%), Positives = 95/303 (31%), Gaps = 46/303 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L+ ++ DV+ LP + R + QG IL +I++I+++ F + ++ +
Sbjct: 61 LTGTDAAAALETLVPIDVIDLPVGMQRYALFTNEQGGILDDLMIARIDDNVFYVVVNAAC 120
Query: 74 RDSLIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIAD 124
+ I L L ++ +Q + + + +F+ R +A
Sbjct: 121 KARDIAHLKDSIGHRCEVVELTDRALLALQGPAAASILGRLAPSLAELTFMQSTRIELAG 180
Query: 125 VL-------------------------LHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT 158
L RT + + + LR+ G+
Sbjct: 181 AACYVSRSGYTGEDGYEISVPADRAYALARTLLDDPAVQPIGLGARDSLRLEAGLCLYGH 240
Query: 159 DFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D T L+ ++ + G Y G VV+R I RKR +
Sbjct: 241 DIDTDTTPIEGGLLWAISKVRRPDGARAGGYPGAAVVARQLAEGIQRKRVGFVVKDRVPV 300
Query: 215 PSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G+ I D IG + A+ I+ + V ++ +
Sbjct: 301 REGTDITGPDGRSIGKVTSGGFGPTYGSPVAIGYVAIECATPGTTLHAIVRGKPVAIEVA 360
Query: 268 FPH 270
Sbjct: 361 KAP 363
>gi|260773858|ref|ZP_05882773.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
metschnikovii CIP 69.14]
gi|260610819|gb|EEX36023.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
metschnikovii CIP 69.14]
Length = 377
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+ ++ DV+ LP R + PQG IL +++ + D
Sbjct: 59 SHMGQLRLHGVDAAAALERLVPVDVIDLPVGKQRYAIFTNPQGGILDDLMVANLG-DHLF 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----NSSFIDERF-- 120
L ++ + + I L + L + V +E+ ++ + + D RF
Sbjct: 118 LVVNAACKAQDIAHLTAH-LPAGVHLEVIEDRALLALQGPKAAQILAQWQPAVADMRFMD 176
Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A H + + LR+
Sbjct: 177 IQTLAINGIECIVSRSGYTGEDGFEISVPADKAVAFAQALAEHPDVEWIGLGARDSLRLE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSR-IQHRNIIRK 202
G+ D T P +A + + G G + G E++ + I+ + + RK
Sbjct: 237 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRIGGE--RAGGFPGAEIILKQIESKQVDRK 293
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
R ++ T G+ + +D ++G +
Sbjct: 294 RVGLVGQTKAPVREGTELFDSDGNKVGIVTS 324
>gi|332531982|ref|ZP_08407866.1| aminomethyltransferase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038609|gb|EGI75052.1| aminomethyltransferase [Pseudoalteromonas haloplanktis ANT/505]
Length = 360
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 94/290 (32%), Gaps = 47/290 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A FL+ ++ DV L A + +L QG ++ +I E +
Sbjct: 50 SHMTIVDIEGPQAKAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYFFSETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + R+ + L + S +V + +P ++ ++ ++ A
Sbjct: 110 RLVVNSATREKDLAHLA--NVSSDFDVTVTERPEFAMIAVQGPNAKAKTATLLNAEQQAA 167
Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147
L + + + L
Sbjct: 168 VEGMKPFFGVQVGDLFIATTGYTGEDGYEIVVPNDQAADLWQQLLDAGVKPAGLGARDTL 227
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D ++ P A M +IG++V+ + + K ++
Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTDKLVGLV 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+ SGS ++ D E G + L A+AR+ + +
Sbjct: 287 FEEKGVLRSGSKVIVDGGE-GVITSGTFSPTLGFSVALARVPRSTGDTAQ 335
>gi|111018161|ref|YP_701133.1| glycine cleavage system aminomethyltransferase T [Rhodococcus
jostii RHA1]
gi|110817691|gb|ABG92975.1| aminomethyltransferase [Rhodococcus jostii RHA1]
Length = 366
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 96/306 (31%), Gaps = 48/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + TP G ++ + + D
Sbjct: 54 SHLGKALVRGSGAAAFVNSALTNDLDKIGPGKAQYTLCCTPSGGVIDDLIAYFVSPDEVF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ------------PINGVVLSWNQEHTFSNSS 114
L + + ++ L V +E Q V+ + +
Sbjct: 114 LVPNAANTADVVAALAATA-PEGVTVENQHRDFGVIAVQGPKSAEVLTALGLPTDIEYMA 172
Query: 115 FIDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHEL 147
F D + V + R+ W +EK+ + + L
Sbjct: 173 FADATWDGVPVRVCRSGYTGEVGFELLPRWEDSEKLFRAAVELVRAHGGQVAGLGARDTL 232
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G + I P +A I K + G+E ++ + RK I
Sbjct: 233 RTEMGYPLHGHELSLE-ISPLEARCGW--AIGWKKPKFWGKETLTDEKESGPARKLWGIK 289
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK-VDHAIKKGMALTVHGV 262
+ +G +L D IG K +A+A +D + +A+ V G
Sbjct: 290 ALDRGVLRAGQTVLRDGESIGETTSGTFSPTLKVGIALALLDSGAGVSAGDEIAVDVRGR 349
Query: 263 RVKASF 268
++A
Sbjct: 350 SLRAEV 355
>gi|10581080|gb|AAG19870.1| aminomethyltransferase [Halobacterium sp. NRC-1]
Length = 387
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 105/312 (33%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ I+V G A +Q + T DV L A+ +AI G ++ ++ + D
Sbjct: 75 SHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPG 134
Query: 64 TFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT---------- 109
F+ + + D+ ++ L ++V + G+V +
Sbjct: 135 AFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD-NVTTDYGMVAVQGPDAPDLVAARAGDG 193
Query: 110 -------------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
++ + ++ F N+ +
Sbjct: 194 VHDLGRFEAATVGVAGVECLVANTGYTGEAGVEIVFPADGAGAVWDAIANDCQPCGLGAR 253
Query: 145 HELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRI-----QHR 197
LR+ HG + DF P P +A + ++ G ++G++ ++ Q
Sbjct: 254 DTLRMEHGFLLSGQDFDPEENPRTPFEAGIGF--AVAPESG-FVGRDALADTDSPEQQFV 310
Query: 198 N-IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ +R + G P+G I + GT+ +G+ + + +D A +A
Sbjct: 311 GLTLDERGVPRHGYAVTTPAGDEI--GTVTSGTMSPTLGEP-IGLGYVDSAHAADGTTVA 367
Query: 257 LTVHGVRVKASF 268
+ + G +A+
Sbjct: 368 VRIRGTDKQATI 379
>gi|189220178|ref|YP_001940818.1| glycine cleavage system T protein (aminomethyltransferase)
[Methylacidiphilum infernorum V4]
gi|189187036|gb|ACD84221.1| Glycine cleavage system T protein (aminomethyltransferase)
[Methylacidiphilum infernorum V4]
Length = 379
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 100/281 (35%), Gaps = 54/281 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + V G A +L +I+T D+ L ++ + +LT +G I+ L+ +I +
Sbjct: 62 LCHMGQFFVEGPKATEWLNSIVTNDLSVLKDGQSQYNLLLTEEGGIIDDLLLYRISSTAY 121
Query: 66 ILEIDRSKRD-----------------------------------SLIDK------LLFY 84
+L ++ + + S++ + L +
Sbjct: 122 LLVVNANAAEKDHHLLRLLLPPEGVSLIDNRQKWGCIAIQGPQSWSILQRVFSIDPLPKH 181
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGH---NEKIASDI 141
LR +I E Q + ++ + SIA L +R N+ + +
Sbjct: 182 TLR-KIIFEKQ---FLYIASTGYTGEPGAELFFP-GSIASALWNRLLEEGKKNDALPCGL 236
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR-NI 199
+ + LR+ + TD P +A + + L+K + G+ + R++
Sbjct: 237 ASRNILRLEASLPLNGTDLREDK-NPWEAGL--SKAVCLSKPSFFPGKTALLRLKDTFQD 293
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ + + P +GSPI + + G + V +L
Sbjct: 294 LLVAFVAVCEGCPQPKTGSPIFSMGEKKGEVTSGVWSPSLG 334
>gi|325474179|gb|EGC77367.1| aminomethyltransferase [Treponema denticola F0402]
Length = 357
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 52/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A + A+IT D+ + R + + +G I+ FL+ + + F+
Sbjct: 49 SHMGEFYIEGDNAEAAVNALITNDIRGMADGDVRYTLMCNEKGGIVDDFLVYRYNQKKFL 108
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN-----VIIEIQPIN--GVVLSWNQEHTFSNS-- 113
L ++ D + L ++ + IQ N VV + ++
Sbjct: 109 LVVNAGNHDKDYDWVKKHLDKSVTFTDRSSEIAQLAIQGPNAPAVVKKFIAPSAMPSAYY 168
Query: 114 SFIDERFSIADVLLHRTW--GHNEKIASDIKTY-------------------------HE 146
+F + +V++ +T G N K +
Sbjct: 169 TFKTFQCPKGEVIVSQTGYTGENGYEIYCPKEWALELFNQVMKAGEEFGIELCGLGCRDT 228
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ + + + I L K +IG++ + IRK +
Sbjct: 229 LRLEAGMPLYGHEMT-EETLATEVTLKPF--IKLEKEDFIGKKAL-ETNEAKKIRKGFKM 284
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262
I + + D EIG + K + RID+ + + + V G
Sbjct: 285 I--DRGIARDHDKVFLGDKEIGYVTTGTSSPSLKVGIGHMRIDR--GIKDEEVFIEVRGK 340
Query: 263 RVKASF 268
++KA
Sbjct: 341 KLKAKI 346
>gi|260432349|ref|ZP_05786320.1| sarcosine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416177|gb|EEX09436.1| sarcosine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
Length = 817
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 91/320 (28%), Gaps = 67/320 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G A F+ V +P + L +G I ++++
Sbjct: 491 MSSFGKIRVEGPDAEKFM-----NYVGGGDYAVPVGKIVYTQFLNRRGGIEADVTVTRLS 545
Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------------------------KLRSNVIIEIQ 95
E +++ + R + ++ + L V +
Sbjct: 546 ETAYLVVTPAATRLADQTWMMRHAGNFNVVITDVTAAEGVLAVMGPNSRALLEKVSPDDF 605
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147
QE R + L + ++ +T HE
Sbjct: 606 SNAANPFGTAQEIEIGMGLARAHRVTYVGELGWEIYVSSDMAGHVFETLHEAGQDMGLKL 665
Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
RI G D DA + + + KGC +IG+E V +
Sbjct: 666 CGLHMMDSCRIEKGFRHFGHDITCEDHV-VDAGLGF--AVKVDKGCDFIGREAVIARKES 722
Query: 198 NIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247
+ R + TD P PI+ D +G L G L ++
Sbjct: 723 G-PKSRLVQFRLTDPEPLLFHNEPIIRDGEYVGYLSSGNYGHMLGGAIGLGYVPCEGERA 781
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ + V G +V+A
Sbjct: 782 ADVLASTYEIDVCGAKVRAE 801
>gi|302338643|ref|YP_003803849.1| glycine cleavage system protein T [Spirochaeta smaragdinae DSM
11293]
gi|301635828|gb|ADK81255.1| glycine cleavage system T protein [Spirochaeta smaragdinae DSM
11293]
Length = 375
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 91/293 (31%), Gaps = 57/293 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ F+ ++T D+ + + + P G ++ +I ++ + +
Sbjct: 52 SHMGEIMVEGPRAVEFVDYLVTNDISKMNDGKCLYALMCRPDGGVVDDLMIYRLSAEKIL 111
Query: 67 LEIDRSKRD------------------------------------------------SLI 78
+ + + + +
Sbjct: 112 IVANAANVEKDFVWISSANPWMQRESDKPKVSNQSDRYAQIAFQGPKANDYFRELLGQAV 171
Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138
D++ F++ R+++ + + + E F D+ I +L +T +
Sbjct: 172 DEITFFRFRTDIPVAGKSCIISRTGYTGEDGFEIYCNADDAADIWTFILDKT-KERGVLP 230
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
+ LR + + TI P +A + + K + G+ + + + +
Sbjct: 231 CGLGARDTLRFEAKLPLYGHEL-SDTISPLEANLSFF--VKFDKHSDFCGKSALLKQKEK 287
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDK 246
I R +P G + D EIG + L + I++
Sbjct: 288 GIPRSLRGCEMVDKGVPREGYKVFLGDREIGYVTSGTKSPMLDSFLGLVLIER 340
>gi|187468775|emb|CAQ51662.1| novel protein (4930543L23Rik) [Mus musculus]
Length = 215
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 15/88 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADV--------LTLPYKIARGSAILTPQGKILL 53
+ L ++ ++V G A PFL + T ++ P A + L QG+ L
Sbjct: 49 TCFRLDGRALVRVRGPDAAPFLLGLSTNELPLSGPPTGAAQPSARAAYAHFLNVQGRTLY 108
Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKL 81
++ +L S S + +L
Sbjct: 109 DVILY-----GLLLNC--SAVASAVRQL 129
>gi|323492271|ref|ZP_08097429.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546]
gi|323313584|gb|EGA66690.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546]
Length = 372
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 110/310 (35%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL++++ D++ L R + QG I+ +++ + D
Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLASGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
+ ++ + ++ I+ L + L S V +EI ++
Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLAIQGPKAVDVLKRFNPEVADMLFMD 171
Query: 107 ---------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
E S S + E + A+ L + G E + LR+
Sbjct: 172 VKKLDILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTGEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIESKDVSRKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + +D ++G + ++A R D + +
Sbjct: 292 LVGQTKAPVREGAELFDAEDNKVGVVTSGTAGPNAGKPVSMAYVRADLAAIGTELFADVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKKLPMTVEK 361
>gi|42527135|ref|NP_972233.1| glycine cleavage system T protein [Treponema denticola ATCC 35405]
gi|41817559|gb|AAS12144.1| glycine cleavage system T protein [Treponema denticola ATCC 35405]
Length = 357
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 102/306 (33%), Gaps = 52/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A + A+IT D+ + R + + +G I+ FL+ + + F+
Sbjct: 49 SHMGEFYIEGDNAEAAVNALITNDIRGMADGDVRYTLMCNEKGGIVDDFLVYRYNQKKFL 108
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSN-----VIIEIQPIN--GVVLSWNQEHTFSNS-- 113
L ++ D + L ++ + IQ N VV + ++
Sbjct: 109 LVVNAGNHDKDYDWVKKHLDKSVTFTDRSSEIAQLAIQGPNAPAVVKKFIAPSAMPSAYY 168
Query: 114 SFIDERFSIADVLLHRTW--GHNEKIASDIKTY-------------------------HE 146
+F + +V++ +T G + K +
Sbjct: 169 TFKTFQCPKGEVIVSQTGYTGEDGYEIYCPKEWALELFNQVMKAGEEFGIELCGLGCRDT 228
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ + + + I L K +IG++ + IRK +
Sbjct: 229 LRLEAGMPLYGHEMT-EETLATEVTLKPF--IKLEKEDFIGKKAL-ETNEAKKIRKGFKM 284
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGV 262
I + + D EIG + K + RID+ + + + V G
Sbjct: 285 I--DRGIARDHDKVFLGDKEIGYVTTGTSSPSLKVGIGHMRIDR--GIKDEEVLIEVRGK 340
Query: 263 RVKASF 268
++KA
Sbjct: 341 KLKAKI 346
>gi|254505666|ref|ZP_05117812.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16]
gi|219551319|gb|EED28298.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16]
Length = 372
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 110/310 (35%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL++++ D++ LP R + QG I+ +++ + D
Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPAGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
+ ++ + ++ I+ L + L S V +E+ ++
Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEVIDDRALLALQGPKAVDVLKRFNAEVADMLFMD 171
Query: 107 ---------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
E S S + E + A L + E + LR+
Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNTHAQELAQKLTAEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTGGEREGGFPGADIILKQIETKDVTRKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + DD ++G + ++A R D + + +
Sbjct: 292 LVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAGKPVSMAYVRADLMAVGTELFAEVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKKLPMTVEK 361
>gi|254435761|ref|ZP_05049268.1| glycine cleavage system T protein [Nitrosococcus oceani AFC27]
gi|207088872|gb|EDZ66144.1| glycine cleavage system T protein [Nitrosococcus oceani AFC27]
Length = 381
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 103/307 (33%), Gaps = 48/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I++ G+ PFL ++ +V L A S +L +G ++ ++ + E F
Sbjct: 60 SHMTVIELKGEKVRPFLHQLLANNVDRLTVPGTALYSCMLNTEGGVIDDLIVYLMAEQEF 119
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + RD ++ + + V +E +P ++ E + E V
Sbjct: 120 RVVSNAGTRDKVLAWIESHAAPFKVQVEERPELAMIAVQGPEARAQVHGQLPESLKEKVV 179
Query: 126 LLHR---TWGHNEKIA----------------SDIKTY-----------------HELRI 149
L R TW +A S + + LR+
Sbjct: 180 NLKRFQATWEEGLFVARTGYTGEDGYELLLSGSQAQDWWRRLQAGGAKPCGLGARDTLRL 239
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P ++ + + +IG+ V+ Q ++ ++
Sbjct: 240 EAGMCLYGADM-DETTTPLESGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQ 298
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVR 263
L +G I T+ +G V G +++A+AR+ V + + V
Sbjct: 299 GKGLMRNGQTITTN---LGEGVVTSGGFSPSLERSIALARV-PVGADGPCEVQIRGRAVP 354
Query: 264 VKASFPH 270
P
Sbjct: 355 AAMVKPP 361
>gi|163789512|ref|ZP_02183951.1| aminomethyltransferase [Carnobacterium sp. AT7]
gi|159875366|gb|EDP69431.1| aminomethyltransferase [Carnobacterium sp. AT7]
Length = 369
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK A FL ++T DV + A+ +AI+ G + +I K++E+ ++
Sbjct: 53 SHMGEILVKGKDAGVFLNYLLTNDVSKIKIGQAQYNAIVNEHGGTIDDLIIFKLDEEGYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+ + S D + + + L +V++E + + +L+ +
Sbjct: 113 VTPNASNSDKVFQWMEKH-LTGDVVLENRSEDIGLLALQGPNA 154
>gi|311108797|ref|YP_003981650.1| glycine cleavage system protein T [Achromobacter xylosoxidans A8]
gi|310763486|gb|ADP18935.1| glycine cleavage system T protein [Achromobacter xylosoxidans A8]
Length = 366
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FLQ ++ DV L A S +L PQG ++ +I D + + ++
Sbjct: 58 VDVIGPDAYAFLQRLVANDVAKLTVPGKALYSCMLNPQGGVIDDLIIYFFAADEWRVVVN 117
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFIDERFSIADVLL 127
D + + K + I P + ++ + + + A L
Sbjct: 118 AGTADKDVAWMQRVKQAGQFDVAITPRRDLAMVAVQGPNARAKVWAARPAWQAASEPL 175
>gi|206901737|ref|YP_002251224.1| glycine cleavage system T protein [Dictyoglomus thermophilum
H-6-12]
gi|206740840|gb|ACI19898.1| glycine cleavage system T protein [Dictyoglomus thermophilum
H-6-12]
Length = 356
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 38/259 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + GK A +Q I T DV L A+ S +L P G I ++ KI+E+ F+
Sbjct: 50 SHMGRILLKGKGAKDLVQYITTNDVNNLYPGKAQYSLVLNPTGTIKDDIIVYKIDEEEFL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ ++D L + V I + +L+ +
Sbjct: 110 MVVNAINTQKILDWLNIHNKF-GVNILDITTDTTLLAIQGPASEKTLEDYFNLNLKNLKY 168
Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNEK--------------IASDIKTYHELRINHGI 153
F + I R + + + + LRI G
Sbjct: 169 YHFQKNHIIISRTGYTGEDGFEIISDLDTGRKIFKDLVENKKVLPCGLGARNTLRIEMGY 228
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ +T P +A + + + + KG +IG++ + +++ + I + +
Sbjct: 229 PLYGHEIDENTT-PWEANLGWV--VKINKGDFIGKDALIEKKNKKEKFLKGF-IMLENGI 284
Query: 214 PPSGSPILTDDIEIGTLGV 232
P + + +IG +
Sbjct: 285 PRDSYEVYLGEEKIGYITS 303
>gi|228471296|ref|ZP_04056102.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3]
gi|228306938|gb|EEK16036.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3]
Length = 363
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + D L + S T QG +L FL+ + EED ++L + +
Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEEDKYMLVPNAAN 116
Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92
K ++ +L L V
Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKVGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151
P N ++ + + +++ G E I + + LR+
Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D ++ + + ++ K +G+E + + + + RK
Sbjct: 236 GFCLYGNDIDDQHT-ALESGLGWITKLTDNKPALVGREALLKQKAEGVTRKLVAFEMVDK 294
Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P I+ + +IG + + + K +A+ +
Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354
Query: 265 KASFPH 270
K P
Sbjct: 355 KVVKPP 360
>gi|302886934|ref|XP_003042356.1| hypothetical protein NECHADRAFT_51705 [Nectria haematococca mpVI
77-13-4]
gi|256723266|gb|EEU36643.1| hypothetical protein NECHADRAFT_51705 [Nectria haematococca mpVI
77-13-4]
Length = 833
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 54/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69
++V G A LQ + TA+V + +L G I +S++ ED F + +
Sbjct: 505 LEVSGPGAAELLQRLSTANVAG-KPGTVTFTLLLDDHGGIRSDVFVSRLAEDLFHVGVNG 563
Query: 70 ---------------------------------------DRSK-------RDSLIDKLLF 83
R++ +D ++ L
Sbjct: 564 PIDLVYFTREARAQTKKSPYRFVEVRDITGGLASVGFWGPRAQDAIKLITKDDFSERALP 623
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y +I P+ S+ E + + D + D L + IA+
Sbjct: 624 YLHTKKAVIAGIPVIATRFSYIGEQGWEIYTTADNGLRLWDAL-WQAGHPYGVIAAGRSA 682
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202
++ LRI G D P++A ++ I K Y+GQ + + + R
Sbjct: 683 FNALRIEKGFRSFGIDLTTE-YDPYEAGLEF--AIHPGKEGYVGQAALKGKSSEKAAKRL 739
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R +II + P+ +G +
Sbjct: 740 RGLIINDGRSVVLGKEPVFAKGRAVGYITSSA 771
>gi|256823671|ref|YP_003147634.1| glycine cleavage system T protein [Kangiella koreensis DSM 16069]
gi|256797210|gb|ACV27866.1| glycine cleavage system T protein [Kangiella koreensis DSM 16069]
Length = 362
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 103/305 (33%), Gaps = 42/305 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + ++V G A +++ ++ DV L A S +L +G ++ ++ + + +
Sbjct: 50 SHMTVVEVTGGEAKAYMRYLLANDVDKLKEPGKALYSGMLNEEGGVIDDLIVYYLTDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE------------------------------IQ 95
++ S RD + + + +V IE +
Sbjct: 110 RTVVNASTRDKDLAWMENVAQQFDVAIEERVDVAMIAVQGPNAVEKAQSIMSDQQKAVVA 169
Query: 96 PINGVVLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ V + + + + + E + + LR+
Sbjct: 170 DLKPFVAAQAGDLFVARTGYTGEDGYEIIVPDSKGIEFWNQLIEAGVKPCGLAARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P +A M ++G++ ++ + + RK ++
Sbjct: 230 EAGMNLYGHDM-DESVSPLEANMGWTIAWQPEDRDFVGRKALAEQKEQGAPRKLIGLVLE 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ G ++ +D +G + K++A+AR+++ + K + + + K
Sbjct: 289 DKGIMREGQEVVVNDEIVGVVTSGTMSPTTSKSIAMARVNRDLNEEKVLVQVRKKQLAAK 348
Query: 266 ASFPH 270
P
Sbjct: 349 VVKPS 353
>gi|83951258|ref|ZP_00959991.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
nubinhibens ISM]
gi|83839157|gb|EAP78453.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
nubinhibens ISM]
Length = 815
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 96/318 (30%), Gaps = 64/318 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G A FL V ++P + L +G I ++++
Sbjct: 490 MSSFGKIRVEGPDAEAFL-----NYVGGGDYSVPVGKIVYTQFLNSRGGIEADVTVTRMS 544
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102
E +++ + R + + +K NV+I ++ P GV+
Sbjct: 545 ETAYLVVTPAATRLADQTWMERHKGNFNVVITDVTPGEGVLAVMGPKARDVLQAVSPNDF 604
Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147
QE R + L + + +T +E
Sbjct: 605 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSADMAGHAFETLYEAGQAHGLKL 664
Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI G D +A + + K +IG++ V R +
Sbjct: 665 CGMHMMDSCRIEKGFRHFGHDITAEDHV-LEAGLGF--AVKTAKPEFIGRDAVLRKKDEG 721
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVDH 249
+ + +T + L P++ D +G L G L + +
Sbjct: 722 LAARMVQFKLTDPEPLLYHNEPVIRDGEIVGYLSSGSYGHALGGAMGLGYVPCKGESAAD 781
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + V G RV+A
Sbjct: 782 VLASTYEIDVAGTRVRAE 799
>gi|162450286|ref|YP_001612653.1| aminomethyltransferase [Sorangium cellulosum 'So ce 56']
gi|161160868|emb|CAN92173.1| Aminomethyltransferase [Sorangium cellulosum 'So ce 56']
Length = 373
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/314 (16%), Positives = 99/314 (31%), Gaps = 60/314 (19%)
Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I + G+ + +L +T DV L A + G IL ++ +I+
Sbjct: 59 SHMGEIILSGEHSGQVVDYL---VTNDVKKLEDGHALYTCACNEAGTILDDLIVYRIDAR 115
Query: 64 TFILEIDRSKRDSLIDKLL-----------------FYKL---RSNVIIEIQPINGVVLS 103
+++ + S RD + + L ++ I+ + +G L
Sbjct: 116 QWLIVCNASNRDKIAAHIRAAAQGHCSFEDASDRTAMMALQGPKALDIVALAGGDGPALR 175
Query: 104 WNQEHTFSNSSFIDERFSIA------------------DVLLHRTW----GHNEKIASDI 141
F +++ + R ++A L R G A+ +
Sbjct: 176 ELAPFHFRDATLANVRCTVARTGYTGEDGIEIFCSPSDAQRLWRALVELGGPLGLEATGL 235
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ + D T P +A + + + L KG ++G+ + RI+ R
Sbjct: 236 GARDTLRLEARLSLYGNDI-DETTNPIEAGLGWV--VKLDKGDFVGRAALQRIKDEGPAR 292
Query: 202 KRPMIITGTDDLPPSGSPILT-DDIEIGTLGV------VVGKKALAIARIDKVDHAIKKG 254
K + G P+L ++G V L A+
Sbjct: 293 KLVGFEMTGRGIARHGYPLLDVSGAKVGVCTSGSPGPTVGKNIGLGYLP--APMAAVGTA 350
Query: 255 MALTVHGVRVKASF 268
+ G V+A
Sbjct: 351 FQVDCRGRTVEAVV 364
>gi|223986323|ref|ZP_03636333.1| hypothetical protein HOLDEFILI_03643 [Holdemania filiformis DSM
12042]
gi|223961712|gb|EEF66214.1| hypothetical protein HOLDEFILI_03643 [Holdemania filiformis DSM
12042]
Length = 360
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 52/300 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FL ++T + L + R S + G + ++ + +++ F+
Sbjct: 51 SHMGEFLVEGPEAAAFLDHLLTNKIANLKHGQMRYSCLCYENGGTVDDLIVYRFDDEHFL 110
Query: 67 LEIDRSKRD---SLIDKLLFY--KLR------SNVII-------------EIQPINGVVL 102
++ S + ++ + +LR S V + ++ +
Sbjct: 111 CVVNASNKQKDWEWFNQNCRHNVQLRNVSSLISQVALQGPKAIEILGKIADLTSLPAKSY 170
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYH 145
+ + + + + R + NE I +
Sbjct: 171 WFTDQIAVAGKACLVSRNGYTGEDGVEIYMRNEDAMAIVGAIMTAGTPLGLIPCGLGARD 230
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + + T P +A ++ + L K +IG++ + Q + + + R
Sbjct: 231 TLRLEAAMPLYGHELDAETS-PLEAGLNF--AVKLDKADFIGKQGI---QEKGLTKVRIG 284
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ + + D IG + KA+A+A +D VDHA VHG
Sbjct: 285 LELLDRGIAREHYEVRQDGAVIGHITSGTMAPTLGKAIAMAYVD-VDHAQDGAEVEVVHG 343
>gi|189238264|ref|XP_974499.2| PREDICTED: similar to chloride channel protein 2 [Tribolium
castaneum]
Length = 1612
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 56/300 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G + ++++I TAD+ TLP + + +G +L +I+KI +D + + +
Sbjct: 1290 EISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNAA 1349
Query: 73 KRDSLIDKLL---------------FYKLR---------------SNV--IIEIQPINGV 100
+ LL K + V + ++ +
Sbjct: 1350 MKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKL 1409
Query: 101 VLSWNQEHTF--------------SNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145
+ E T F +I V + R NE + + +
Sbjct: 1410 YFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARD 1469
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D T P +A + L + + G E + RKR
Sbjct: 1470 SLRLEAGMCLYGNDLTAETT-PIEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRV 1528
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+I + G+PI+ + EIG++ A+A D + K + +
Sbjct: 1529 GLIADSGPPARHGTPIVDANGNEIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKI 1588
>gi|270008909|gb|EFA05357.1| hypothetical protein TcasGA2_TC015522 [Tribolium castaneum]
Length = 403
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 56/300 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G + ++++I TAD+ TLP + + +G +L +I+KI +D + + +
Sbjct: 81 EISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNAA 140
Query: 73 KRDSLIDKLL---------------FYKLR---------------SNV--IIEIQPINGV 100
+ LL K + V + ++ +
Sbjct: 141 MKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKL 200
Query: 101 VLSWNQEHTF--------------SNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYH 145
+ E T F +I V + R NE + + +
Sbjct: 201 YFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARD 260
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D T P +A + L + + G E + RKR
Sbjct: 261 SLRLEAGMCLYGNDLTAETT-PIEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRV 319
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+I + G+PI+ + EIG++ A+A D + K + +
Sbjct: 320 GLIADSGPPARHGTPIVDANGNEIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKI 379
>gi|188577343|ref|YP_001914272.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|238689551|sp|B2SSQ1|GCST_XANOP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|188521795|gb|ACD59740.1| glycine cleavage system T protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 369
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + +R +V +E + ++ + +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAVRFDVRVEERSDFAMIAVQGPNARANVIDLLDPADTAAAS 169
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R + I+ + G + + P +A + N +
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216
>gi|58581417|ref|YP_200433.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|84623354|ref|YP_450726.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|75508239|sp|Q5H1X3|GCST_XANOR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123522400|sp|Q2P4S5|GCST_XANOM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|58426011|gb|AAW75048.1| glycine cleavage T protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84367294|dbj|BAE68452.1| probable aminomethyltransferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 369
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + +R +V +E + ++ + +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAVRFDVRVEERSDFAMIAVQGPNARANVIDLLDPADTAAAS 169
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R + I+ + G + + P +A + N +
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216
>gi|254430704|ref|ZP_05044407.1| glycine cleavage system T protein [Cyanobium sp. PCC 7001]
gi|197625157|gb|EDY37716.1| glycine cleavage system T protein [Cyanobium sp. PCC 7001]
Length = 368
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 95/323 (29%), Gaps = 69/323 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62
S+ + + G A LQ ++ D+ + A + +L +G I ++
Sbjct: 51 SHMGVLTLRGDGAKDALQGLVPTDLFRIGPGEACYTVLLNEKGGIRDDLIVYDRGRQADA 110
Query: 63 -----DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-------NGVVLSWNQEHTF 110
D +L I+ + D+ + +E Q I +GV+L+
Sbjct: 111 GGGVCDELVLVINAACADTDTAWICG-------QLEPQGIGVSDRKGDGVLLALQGPEAQ 163
Query: 111 SNSSFID-------ERFS------------------------------IADVLLHRTWGH 133
S + RF A V L +
Sbjct: 164 SRLEALSGTSLDGLPRFGHRELKLAGCTAFVGRTGYTGEDGFELLLPREAGVALWQQLVG 223
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ LR+ + + +T P +A + L + + K ++G+EV+ R
Sbjct: 224 AGVTPCGLGARDTLRLEAAMHLYGQEMDANTT-PLEAGLGWLVHLEMPKP-FVGREVLER 281
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKV 247
+ R+ ++ + G P+L +G + ALA +
Sbjct: 282 QSAEGVSRRLVGLMLQGRAIARHGYPVLHGGRAVGEVTSGTWSPTLGEAIALAYVPTEAA 341
Query: 248 DHAIKKGMALTVHGVR-VKASFP 269
+ + + V P
Sbjct: 342 RIGTELAVEIRGKAEPAVVVKRP 364
>gi|77164028|ref|YP_342553.1| glycine cleavage system T protein [Nitrosococcus oceani ATCC 19707]
gi|123771819|sp|Q3JDS3|GCST_NITOC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|76882342|gb|ABA57023.1| Glycine cleavage system T protein [Nitrosococcus oceani ATCC 19707]
Length = 371
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 103/307 (33%), Gaps = 48/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I++ G+ PFL ++ +V L A S +L +G ++ ++ + E F
Sbjct: 50 SHMTVIELKGEKVRPFLHQLLANNVDRLTVPGTALYSCMLNTEGGVIDDLIVYLMAEQEF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + RD ++ + + V +E +P ++ E + E V
Sbjct: 110 RVVSNAGTRDKVLAWIESHAAPFKVQVEERPELAMIAVQGPEARAQVHGQLPESLKEKVV 169
Query: 126 LLHR---TWGHNEKIA----------------SDIKTY-----------------HELRI 149
L R TW +A S + + LR+
Sbjct: 170 NLKRFQATWEEGLFVARTGYTGEDGYELLLSGSQAQDWWRRLQAGGAKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P ++ + + +IG+ V+ Q ++ ++
Sbjct: 230 EAGMCLYGADM-DETTTPLESGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQ 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVR 263
L +G I T+ +G V G +++A+AR+ V + + V
Sbjct: 289 GKGLMRNGQTITTN---LGEGVVTSGGFSPSLERSIALARV-PVGADGPCEVQIRGRAVP 344
Query: 264 VKASFPH 270
P
Sbjct: 345 AAMVKPP 351
>gi|169236303|ref|YP_001689503.1| glycine cleavage system aminomethyltransferase T [Halobacterium
salinarum R1]
gi|228915427|ref|NP_280390.2| glycine cleavage system aminomethyltransferase T [Halobacterium sp.
NRC-1]
gi|31340146|sp|Q9HPJ7|GCST_HALSA RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|229807550|sp|B0R5Y8|GCST_HALS3 RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|167727369|emb|CAP14157.1| aminomethyltransferase (glycine cleavage system protein T)
[Halobacterium salinarum R1]
Length = 363
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 105/312 (33%), Gaps = 57/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ I+V G A +Q + T DV L A+ +AI G ++ ++ + D
Sbjct: 51 SHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPG 110
Query: 64 TFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT---------- 109
F+ + + D+ ++ L ++V + G+V +
Sbjct: 111 AFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD-NVTTDYGMVAVQGPDAPDLVAARAGDG 169
Query: 110 -------------------------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
++ + ++ F N+ +
Sbjct: 170 VHDLGRFEAATVGVAGVECLVANTGYTGEAGVEIVFPADGAGAVWDAIANDCQPCGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRI-----QHR 197
LR+ HG + DF P P +A + ++ G ++G++ ++ Q
Sbjct: 230 DTLRMEHGFLLSGQDFDPEENPRTPFEAGIGF--AVAPESG-FVGRDALADTDSPEQQFV 286
Query: 198 N-IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ +R + G P+G I + GT+ +G+ + + +D A +A
Sbjct: 287 GLTLDERGVPRHGYAVTTPAGDEI--GTVTSGTMSPTLGEP-IGLGYVDSAHAADGTTVA 343
Query: 257 LTVHGVRVKASF 268
+ + G +A+
Sbjct: 344 VRIRGTDKQATI 355
>gi|317405542|gb|EFV85847.1| glycine cleavage system T protein [Achromobacter xylosoxidans C54]
Length = 366
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G A FLQ ++ DV L A + +L PQG ++ ++ D + + ++
Sbjct: 60 VTGPDAYAFLQRLVANDVAKLTVPGKALYTCMLNPQGGVIDDLIVYFFALDEWRVVVNAG 119
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVV-LSWNQEHTFSNSSFIDERFSIADVLL 127
D + + K + I P + ++ + + + A L
Sbjct: 120 TADKDMAWMQRVKQAGKFDVTITPRRDLAMIAVQGPNARAKVWAARPAWQAASEPL 175
>gi|110677436|ref|YP_680443.1| FAD dependent oxidoreductase, putative [Roseobacter denitrificans
OCh 114]
gi|109453552|gb|ABG29757.1| FAD dependent oxidoreductase, putative [Roseobacter denitrificans
OCh 114]
Length = 815
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 95/321 (29%), Gaps = 68/321 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A+ F+ DV P + L +G I ++++
Sbjct: 489 MSSFGKIRVEGRDAVAFMNHVGGGQF--DV---PVGKIVYTQFLNHKGGIEADVTVTRLS 543
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102
E F++ + R L D+ + R + V+ ++ GV+
Sbjct: 544 ETAFLVVTPAATR--LADQTWMMRHRGDFNVVVTDVTAGEGVLAIMGPNARKLLQEVSPA 601
Query: 103 ---------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE------- 146
QE R + L + ++ A + HE
Sbjct: 602 DFSNAVNPFGTAQEIELGMGLARVHRVTYVGELGWEVYVSSDMAAHAFEVLHEAGQDLGV 661
Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
R+ G D +A + + K +IG++ V R +
Sbjct: 662 KLCGMHMMDCARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKKD 718
Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247
+ + + + L P+L + +G L G L +
Sbjct: 719 TGLESRLVQFKLKDPEPLLYHNEPVLRNGEIVGFLSSGAYGHHLGGAMGLGYVPCAGETA 778
Query: 248 DHAIKKGMALTVHGVRVKASF 268
+ + V GVRV A
Sbjct: 779 AEVLASDYEVDVAGVRVAADV 799
>gi|119471832|ref|ZP_01614165.1| glycine cleavage system aminomethyltransferase T [Alteromonadales
bacterium TW-7]
gi|119445322|gb|EAW26611.1| glycine cleavage system aminomethyltransferase T [Alteromonadales
bacterium TW-7]
Length = 360
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 93/290 (32%), Gaps = 47/290 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A FL+ ++ DV L A + +L QG ++ +I E +
Sbjct: 50 SHMTIVDIEGDQAKAFLRKLVANDVAKLTVPGKALYTGMLNEQGGVIDDLIIYFFSETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + R+ + L + S+ V + +P ++ + ++ A
Sbjct: 110 RLVVNSATREKDLAHLA--NVSSDFAVTVTERPEFAMIAVQGPNAREKTGTLLNAEQQAA 167
Query: 124 ------------------------------------DVLLHRTWGHNEKIASDIKTYHEL 147
L + + + L
Sbjct: 168 VEGMKPFFGVQVGDLFIATTGYTGEDGYEIVVPNDQAADLWQQLLDAGVAPAGLGARDTL 227
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G+ D ++ P A M +IG++V+ + + K ++
Sbjct: 228 RLEAGMNLYGLDM-DESVSPLAANMAWTIAWEPEDRDFIGRDVLVKQRAEKSTDKLVGLV 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+ SGS ++ D E G + L A+AR+ + +
Sbjct: 287 LEEKGVLRSGSKVIVDGGE-GVITSGTFSPTLGFSVALARVPRSTGDTAQ 335
>gi|218891576|ref|YP_002440443.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58]
gi|254235451|ref|ZP_04928774.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719]
gi|254240878|ref|ZP_04934200.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192]
gi|126167382|gb|EAZ52893.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719]
gi|126194256|gb|EAZ58319.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192]
gi|218771802|emb|CAW27579.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58]
Length = 373
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEDRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|304317374|ref|YP_003852519.1| glycine cleavage system protein T [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778876|gb|ADL69435.1| glycine cleavage system T protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 367
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 61/313 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + GK + F+ II+ ++ + A S + G + L+ K + ++
Sbjct: 53 SHMGELIIEGKDSEKFINYIISNNIAKISDNQAMYSPMCYANGTTVDDLLVYKFSNEKYM 112
Query: 67 LEIDRS-----------------------------------KRDSLIDKLLFYKL----- 86
L ++ S K ++ K Y L
Sbjct: 113 LVVNASNIDKDYNWIFENKSGYNIAVKNISNEVSELALQGPKAQEILQKTTEYNLDDMKY 172
Query: 87 --RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDI 141
I + +N ++ F+ R A + + E+ + +
Sbjct: 173 YHFDK--INLAGVNCLISRTGYTGEDGFEIFL--RNDYAQSMWEKILAVGEEFGIKPAGL 228
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR G+ + I P +A + + K +IG++ + + + + R
Sbjct: 229 GARDTLRFEAGLPLYGNEL-SDEITPLEAGLGSF--VKFEKA-FIGRDALFKQKQDGLKR 284
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
K + +P G + +IG + +A+ I I +
Sbjct: 285 KIVGFEMIENGIPRHGYDVCAQGEKIGYVTTGYLSPTLKKNIGMAL--ISSKFANIGNEI 342
Query: 256 ALTVHGVRVKASF 268
++ + +KA
Sbjct: 343 SIIIRNKPLKAIV 355
>gi|293607679|ref|ZP_06690010.1| aminomethyltransferase [Achromobacter piechaudii ATCC 43553]
gi|292813817|gb|EFF72967.1| aminomethyltransferase [Achromobacter piechaudii ATCC 43553]
Length = 366
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 18/142 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FLQ ++ DV L A S +L PQG ++ +I D + + ++
Sbjct: 58 VDVAGPDAFAFLQRLVANDVARLTVPGKALYSCMLNPQGGVIDDLIIYFFAADEWRVVVN 117
Query: 71 RSKRDSLIDKLLFYKL----------RSNVI-IEIQPINGVVLSWN-----QEHTFSNSS 114
D + + K R ++ + +Q N W Q T + +
Sbjct: 118 AGTADKDVAWMQRVKQAGNFDVAITPRRDLAMVAVQGPNARAKVWAARPAWQAATEALTP 177
Query: 115 FIDERFSIADVLLHRTWGHNEK 136
F+ R D L+ RT E
Sbjct: 178 FVAARI-DGDTLVARTGYTGED 198
>gi|163744121|ref|ZP_02151486.1| FAD dependent oxidoreductase/aminomethyl transferase [Phaeobacter
gallaeciensis 2.10]
gi|161382619|gb|EDQ07023.1| FAD dependent oxidoreductase/aminomethyl transferase [Phaeobacter
gallaeciensis 2.10]
Length = 817
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 94/315 (29%), Gaps = 58/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G A FL I A++ ++P + L +G I ++++ E +
Sbjct: 492 MSSFGKIRVEGPDAEKFLNYICGANL-SVPAGKIVYTQFLNTRGGIEADVTVTRLSETAY 550
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
++ R + ++ + V+I ++ GV+
Sbjct: 551 LVVTPAVTRLADQTWMMRHVGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 610
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
QE R + L + + +T HE
Sbjct: 611 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLHEAGQDMGLKLCGMH 670
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D DA + + K +IG+ V ++ R
Sbjct: 671 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKADFIGKAAVLELKETG-PRN 726
Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK------ALAIARID--KVDHAIK 252
R + TD P PI+ D +G L + D +
Sbjct: 727 RMVQFKLTDAEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCDGESAADVLG 786
Query: 253 KGMALTVHGVRVKAS 267
+ V GV+VKA
Sbjct: 787 SSYEIDVCGVKVKAE 801
>gi|15642984|ref|NP_228026.1| glycine cleavage system aminomethyltransferase T [Thermotoga
maritima MSB8]
gi|11132546|sp|Q9WY54|GCST_THEMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|55670726|pdb|1WOO|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670727|pdb|1WOP|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670730|pdb|1WOR|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670731|pdb|1WOS|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|4980709|gb|AAD35303.1|AE001706_2 aminomethyltransferase [Thermotoga maritima MSB8]
Length = 364
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 102/301 (33%), Gaps = 59/301 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ F+ +IT D +LP A S + G I+ ++ K+ D +
Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEAL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------------FSN 112
+ ++ + + + + + +V + ++++ +
Sbjct: 109 MVVNAANIEKDFNWIKSHSKNFDVEVSNISDTTALIAFQGPKAQETLQELVEDGLEEIAY 168
Query: 113 SSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHEL------------------ 147
SF + + L+ RT E + + K + L
Sbjct: 169 YSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLLRKIDGRPAGLGARD 228
Query: 148 --RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R+ + D P + + + + L K ++G+E + ++ + + ++ +
Sbjct: 229 VCRLEATYLLYGQDM-DENTNPFEVGLSWV--VKLNKD-FVGKE--ALLKAKEKVERKLV 282
Query: 206 IITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ + + G +L + +G + ALA+ V ++K G L
Sbjct: 283 ALELSGKRIARKGYEVLKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKIGDQLG 337
Query: 259 V 259
V
Sbjct: 338 V 338
>gi|332031409|gb|EGI70922.1| Aminomethyltransferase, mitochondrial [Acromyrmex echinatior]
Length = 360
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 47/265 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK +L+++ T D+ L A + +G IL +I+K +ED + + + +
Sbjct: 43 VSGKDTGEYLESLTTCDLKNLSRGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAGR 102
Query: 74 RDS----LIDK---LLFY--------------------------KLRSNVIIEIQPINGV 100
RD L+++ L S V I+++ + +
Sbjct: 103 RDEDSRLLLERQDDFKKIGKDVYIDFLDPLEQGLIALQGPTAETVLHSLVKIDLRSLKFM 162
Query: 101 VLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ T + I + A L+ R + + LR+
Sbjct: 163 NSVKTEVSGSRIRISRCGYTGEDGFEISVPANDAINLVERILEIPGVKLAGLGARDSLRL 222
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ D P +A + L + + G + + +KR ++
Sbjct: 223 EAGLCLYGHDI-NEDTTPIEAALTWLVAKRRRVEANFPGAQRILSQIKTGTTKKRVGLLL 281
Query: 209 GTDDLPPSGSPILT-DDIEIGTLGV 232
G G+PILT + +G++
Sbjct: 282 GQGPPAREGAPILTPEGERVGSVTS 306
>gi|260575689|ref|ZP_05843686.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
gi|259022087|gb|EEW25386.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
Length = 793
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 87/274 (31%), Gaps = 46/274 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A LQ + DV +P + +L +G I ++++ E F
Sbjct: 489 MTSFGKIRVEGRDARALLQRLCGNDVD-VPVGRIVYTQMLNARGGIESDLTVTRLTETAF 547
Query: 66 ILEIDRSKRDSLIDKLLF-----YKLRSNVIIEIQ------PINGVVLSWNQEHTFSNSS 114
+L + + + L + + ++V P + +L+ FSN++
Sbjct: 548 LLVVPGATLQRDLAWLRRHLGEAFAVVTDVTAAEAVLCVMGPKSREMLASVSPDDFSNAA 607
Query: 115 FI---------------DERFSIADVLLHRTWGHNEKIA---------------SDIKTY 144
R + L + ++ A + T
Sbjct: 608 HPFGTAREIEIGMGVARAHRVTYVGELGWELYVSTDQAAHVFEALLEADPGLKLCGLHTL 667
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
R+ D +A + + KG +IG+E V R + R+
Sbjct: 668 DSCRMEKAYRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGREAVLRKAEAGLERRLV 724
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+T + + ++ D +G +
Sbjct: 725 QFRLTDPEPMLFHNEAVVRDGKIVGPVTSGAYGH 758
>gi|56698220|ref|YP_168592.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
gi|56679957|gb|AAV96623.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
Length = 816
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/326 (15%), Positives = 94/326 (28%), Gaps = 70/326 (21%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFL 56
+ +S+ I+V G A +L DV P + L G I
Sbjct: 486 LGMYDMSSFGKIRVEGPDATAYLNHIAGGQF--DV---PVGRIVYTQFLNVNGGIEADVT 540
Query: 57 ISKIEEDTFILEIDRSKRDSLIDKLLFYKL---RSNVIIEIQPINGVVL----------- 102
++++ E +++ + R + + +L VI ++ GV+
Sbjct: 541 VTRLSETAYLVVTPAATRYADQTR--MMRLVGDFRVVITDVTAGEGVLAVMGPKARELMA 598
Query: 103 --------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL- 147
QE R + L + ++ +T E
Sbjct: 599 RVSPNDFSNDVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSSDMAGHAFETLFEAG 658
Query: 148 ----------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
RI D P +A + + K +IG++ V
Sbjct: 659 QDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHV-LEAGLGF--AVKTDKPDFIGRDAV 715
Query: 192 SRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI- 244
R + ++ R + TD P P+L D +G L A+ + +
Sbjct: 716 LRKKDEG-LKTRMVQFRLTDPEPLLYHNEPLLRDGQIVGYLSSGAYGHHLGSAIGMGYVP 774
Query: 245 ---DKVDHAIKKGMALTVHGVRVKAS 267
+ + + V G RV+A
Sbjct: 775 CEGESAADVLASTYEIDVMGTRVRAE 800
>gi|94968297|ref|YP_590345.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Koribacter versatilis Ellin345]
gi|94550347|gb|ABF40271.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Koribacter versatilis Ellin345]
Length = 400
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/327 (14%), Positives = 98/327 (29%), Gaps = 78/327 (23%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A F+ +IT D+ + GK++ I+++ E+T+ +
Sbjct: 60 ITGDDATQFVNRVITRDIKKVAINQVIYCCWCDQDGKVIDDGTITRLGENTYRW----TA 115
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------------- 118
D + + V IE + L+ + + + + E
Sbjct: 116 ADPSLRWFRQNSIAMKVQIEDISESVSALALQGPTSAALLASVAEADIANLKYFRMTKGR 175
Query: 119 ---------RFSIADVLLHRTWGHNE-------KIASDIKTYHEL----------RINHG 152
R L + W E +A+ + RI G
Sbjct: 176 INGIDVDISRTGYTGDLGYEIWIPWEHSLRVWDALATAGNAFDLHPVGMLALDVARIEAG 235
Query: 153 IVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-- 202
++ D+ P + D + + L K ++G+E + + + RK
Sbjct: 236 LLLIEVDYFSSKKALIDSQKYSPFELGFDKM--VHLDKETFVGREALLKEKGSRTGRKLV 293
Query: 203 ----------RPMIITGTDDLPPSGS-----PILTDDIEIGTLGVVVGKKAL----AIAR 243
+ G PS + P+ +++ G L A+A
Sbjct: 294 GLEFDWTAVEKLYDRVGLPPQVPSAASRVPVPVYRGNVQAGKATSTTWSPILKKMIALAS 353
Query: 244 IDKVDHAI--KKGMALTVHGVRVKASF 268
+D AI + +T+ VR K +
Sbjct: 354 VDAAHSAIGTELQAEITIEAVRYKTAV 380
>gi|163746324|ref|ZP_02153682.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
gi|161380209|gb|EDQ04620.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
Length = 815
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 87/321 (27%), Gaps = 64/321 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLIS 58
+S+ I+V G A FL V + +P + L P+G I ++
Sbjct: 487 LYDMSSFGKIRVEGPEAEAFL-----NHVCGAQMAVPVGKIVYTQFLNPRGGIEADITVT 541
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
++ E +++ + R + L + V+I VL+ + I
Sbjct: 542 RLSETAYLVVTPAATRLADETWLRRHAGERRVVITDVTAGEAVLAVMGPNARRLLQAISP 601
Query: 119 --------------------------RFSIADVLLHRTWGHNEKIA-------------- 138
R S L + E A
Sbjct: 602 NDFSNVVHPFGMAREIEIGMGLARAHRVSYVGELGWEIYVSTEMAAHVFEVLMEAGAAFG 661
Query: 139 ---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ RI G D +A + + K +IG++ V R +
Sbjct: 662 LKLCGLHAMDSCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKK 718
Query: 196 HRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DK 246
+ + + + L PIL D G L G L
Sbjct: 719 EEGLKLRMLQFRLNDPEPLLYHAEPILRDGRIAGYLSSGNYGHHLGGAIGLGYVPCAGQS 778
Query: 247 VDHAIKKGMALTVHGVRVKAS 267
V + + + G RV+A
Sbjct: 779 VADLLGSTYEIDIAGRRVRAE 799
>gi|260654612|ref|ZP_05860102.1| glycine cleavage system T protein [Jonquetella anthropi E3_33 E1]
gi|260630628|gb|EEX48822.1| glycine cleavage system T protein [Jonquetella anthropi E3_33 E1]
Length = 362
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 81/270 (30%), Gaps = 47/270 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK + +L +++T DV T+ + + G ++ L+ + + ++
Sbjct: 44 SHMGEVTVVGKDSEAWLNSLLTNDVTTMHDGQVLYTIMCRENGGVVDDLLVYRYNTERYL 103
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI--------------------------QPINGV 100
L I+ + + + L+ +V I+ P V
Sbjct: 104 LVINAANVEKDWAWFNEH-LKGDVKIDNISAKTAEVALQGPLAEKILCKIAEGFDPTKLV 162
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIAS-DIKT 143
+ + I R + G E + +
Sbjct: 163 FFHFVDGVKVAGIPAIVSRTGYTGEDGFEIYVDWSKGAELWDAIIAAGKPEGLMPIGLGA 222
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G+ ++ + P +A + G +IGQ+V+ + + + RK
Sbjct: 223 RDSLRFESGLPLCGQEYT-DDLGPLEAGYGFFVKVDKPNG-FIGQKVLRQQKAEGLKRKI 280
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
+P + +G +
Sbjct: 281 VFTKMIDKGVPRHEMEVADASGKVVGCVTT 310
>gi|163758639|ref|ZP_02165726.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
gi|162283929|gb|EDQ34213.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
Length = 814
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 92/314 (29%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I+V G+ A+ FLQ + D+ + + +L +G I ++++ E F
Sbjct: 489 MTSFGKIRVEGRDALSFLQRLCANDMD-VAPGRIVYTQMLNARGGIECDLTVTRLTETAF 547
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------NQE 107
+L + + + L + S +I VL N
Sbjct: 548 LLVVPGATLQRDLAWLRRHVGDSFAVITDVTAAEAVLCVMGPNARSLLQAVSPNDFSNDA 607
Query: 108 HTFSNS--------SFIDERFSIADVLLHRTWGHNEKIA-----------------SDIK 142
H F + R + L + +++ A +
Sbjct: 608 HPFGIAREIEIGMGLARAHRVTYVGELGWELYVSSDQAAHVFETLAEAGGDHGLKLCGLH 667
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T RI D +A + + KG +IG++ V + + R+
Sbjct: 668 TLDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTGKGDFIGRDAVLAKREAGLSRR 724
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDHAIKK 253
+ + L I+ D + + G L + +
Sbjct: 725 LVQFQLRDPEPLLFHNEVIVRDGEIVSIITSGNYGHHLGGAIGLGYVPSAGESAADVLAS 784
Query: 254 GMALTVHGVRVKAS 267
+ + G R +A
Sbjct: 785 SYEIEIAGERHQAI 798
>gi|118462423|ref|YP_881484.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium 104]
gi|166221557|sp|A0QEZ6|GCST_MYCA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|118163710|gb|ABK64607.1| glycine cleavage system T protein [Mycobacterium avium 104]
Length = 367
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + +++D
Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + ++++ L RS ++ +Q V+ ++
Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTVSNLHRSYAVLAVQGPRSADVLAELGLPSDMDYMAY 174
Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148
D F V + RT W + + LR
Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + P I P A I K + G++ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L +G +L D +G +A+A ID D ++ G +TV
Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALID-TDADVRDGQKVTVDVR 348
Query: 261 --GVRVKASFPH 270
+ P
Sbjct: 349 GRAATCEVVRPP 360
>gi|254456036|ref|ZP_05069465.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083038|gb|EDZ60464.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp.
HTCC7211]
Length = 392
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 62/282 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI-LEID 70
I++ G FL+ ++T V T+ S TPQG I + +I K E+ F ++ D
Sbjct: 74 IEISGPDVAAFLEKVMTRKVSTIKEGRGYYSLACTPQGGIFMDGVIFKFSENKFWYVQAD 133
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS----------------NSS 114
D L+ + +V I + P + V+ S
Sbjct: 134 GPFEDWLLAHSKGF----DVKI-LDPKSRVIQIQGPASIDIMKAASNGKINENMQYYRSG 188
Query: 115 FID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------- 147
F D R + L + K + + L
Sbjct: 189 FFDLGGQNLYVSRSGFTNELGFEIYSDGFKTDH-LALWDHLMNCGKPFGMELSATRAMTI 247
Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI GI N + +TI P +A + +++ K +IG++ + + +
Sbjct: 248 RRIEAGIF-GNLTDIDTTINPFEAGLGF--CVNMDKEDFIGRDALLN-KDKGTC---LFG 300
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
+T + P SGS ++ +D +G + V + R
Sbjct: 301 LTCKTETPVSGSKVIDEDKIVGHITAGVHSLTLNTGIGYVRF 342
>gi|289524478|ref|ZP_06441332.1| aminomethyltransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502284|gb|EFD23448.1| aminomethyltransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 176
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V GK A+ F+ ++T DV L S + G ++ LI +E+ F+
Sbjct: 59 SHMGEITVEGKDALKFINYLVTNDVTKLVPGKVMYSPMCYEHGGVVDDLLIYMYDENRFL 118
Query: 67 LEIDRSKRD 75
L ++ + +D
Sbjct: 119 LVVNAANKD 127
>gi|323499244|ref|ZP_08104221.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326]
gi|323315632|gb|EGA68666.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326]
Length = 372
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 110/311 (35%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL++++ D++ LP R + QG I+ +++ + D
Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPQGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDERF-- 120
+ ++ + ++ I+ L + L S V +EI ++ + N+ D F
Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLALQGPKAVDVLKRFNADVADMLFMD 171
Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ A+ L + E + LR+
Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTLEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRP 204
G+ D T P +A + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDT-TTTPVEASLLWGIQKVRRAGGEREGGFPGADIILKQIETKDVSRKRV 290
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257
++ T G+ + DD ++G + ++A R D + + +
Sbjct: 291 GLVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAGKPVSMAYVRADLMAVGTELFAEV 350
Query: 258 TVHGVRVKASF 268
+ +
Sbjct: 351 RGKKLPMTVEK 361
>gi|78778663|ref|YP_396775.1| hypothetical protein PMT9312_0278 [Prochlorococcus marinus str. MIT
9312]
gi|78712162|gb|ABB49339.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9312]
Length = 278
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 22/249 (8%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG--KILLYFLISKIEEDTFILEID 70
V GK A FL I T ++L + LTP G + L+ + + + IL
Sbjct: 17 SVSGKDAKKFLNGITTGNILN-SENKVTKTCWLTPTGILRSLIEIIFLEKSLEVIIL--- 72
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
+ +ID ++ + I + + S ++ F D
Sbjct: 73 AGNINEIIDYFNQIIFPAD-DVLISEPFSINRIQEIDEISSWRTYQPIFFKKNDKEFE-- 129
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
N+ + ++N I + + P + + L I KGC++GQE
Sbjct: 130 IYKNKLNLLNSNDLKLWKVNQAIPSLDMEI-NGKNNPLELGLQDL--IDFNKGCFLGQET 186
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPP---SGSPILTD---DIEIGTLGVVVGK----KALA 240
+S+I++ + +++ + D + T+ + +G + + K LA
Sbjct: 187 MSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDHHIKGLA 246
Query: 241 IARIDKVDH 249
+ + ++
Sbjct: 247 MIKKKYLEE 255
>gi|87123424|ref|ZP_01079275.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9917]
gi|86169144|gb|EAQ70400.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9917]
Length = 366
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 54/304 (17%)
Query: 7 SNQSFIKVCG---KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ +++ G K A LQ ++ +D+ + A + +L G IL ++ +E+
Sbjct: 51 SHMGVVRLDGTNPKDA---LQGLVPSDLHRIGPGQACYTVLLNANGGILDDLIVYDLEDG 107
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------ 117
+L I+ + L + + + + +G++L+ + +
Sbjct: 108 ALLLVINAACAARDTAWLRDHLEPAGIHLSDVKGDGLLLALQGPEARQHLEALSGNDLQE 167
Query: 118 -ERFS-----------------------------------IADVLLHRTWGHNEKIASDI 141
RF A L +
Sbjct: 168 LPRFGHRWLQISGLTPEPTRVLAARTGYTGEDGFELLLPREAGRALWSQLLERGVRPCGL 227
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ + D +T P A + L + +IG++ + R + R
Sbjct: 228 GARDSLRLEAAMHLYGQDMDQNTS-PLQAGLGWLVHLE-NPVPFIGRDALEREVEQGSER 285
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMAL 257
+ + +P G PIL D +GT+ + + + + +A+
Sbjct: 286 RLVGLRLEGRAIPRHGYPILHDGQPVGTITSGGWSPTLEAGIGLGYVSRSLARAGTDLAV 345
Query: 258 TVHG 261
+ G
Sbjct: 346 EIRG 349
>gi|300689857|ref|YP_003750852.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Ralstonia solanacearum
PSI07]
gi|299076917|emb|CBJ49530.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Ralstonia solanacearum
PSI07]
Length = 375
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQAPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + I +V Q I R S +
Sbjct: 111 RLVVNAGTAPT-------------------DIEWIVA---QNAAAGTGVTITPRRSDNNA 148
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + KTY L P T + + P +A L+G+
Sbjct: 149 GTEPLGILAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATLDGV------ 194
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 195 --GEIMVARTGYTG 206
>gi|238787334|ref|ZP_04631133.1| Aminomethyltransferase [Yersinia frederiksenii ATCC 33641]
gi|238724596|gb|EEQ16237.1| Aminomethyltransferase [Yersinia frederiksenii ATCC 33641]
Length = 365
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + RD +D + + V + ++ +V E ++ + A
Sbjct: 110 RLVVNSATRDKDLDWITQHAAPYQVEVTVRDDLALVAVQGPEAQKKVATLLTPEQQQAIA 169
Query: 126 LLHRTWG 132
+ +G
Sbjct: 170 GMKPFFG 176
>gi|302554288|ref|ZP_07306630.1| glycine cleavage system T protein [Streptomyces viridochromogenes
DSM 40736]
gi|302471906|gb|EFL34999.1| glycine cleavage system T protein [Streptomyces viridochromogenes
DSM 40736]
Length = 373
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 98/305 (32%), Gaps = 55/305 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + + AR + I G IL ++ ++ E
Sbjct: 54 LSHMGEITVTGPQAAALLDHALVGN-IGGVKPGRARYTMICRADGGILDDLIVYRLAETE 112
Query: 65 FILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
+++ + S +++ L + + + ++ E S D
Sbjct: 113 YMVVANASNAQVVLEALVERSAGFDAEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 172
Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
+ L+ RT E K ++ +
Sbjct: 173 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLAPCGLSC 232
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + ++ P DA + + + K G ++G+E ++ R
Sbjct: 233 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKEGDFVGREALAEAASRAEQNP 289
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
R ++ +P +G ++ IG + L A+A +D HA
Sbjct: 290 PRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVD-AGHAAPGTP 348
Query: 256 ALTVH 260
+ V
Sbjct: 349 GVAVD 353
>gi|222099448|ref|YP_002534016.1| Aminomethyltransferase [Thermotoga neapolitana DSM 4359]
gi|254797883|sp|B9K6R7|GCST_THENN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|221571838|gb|ACM22650.1| Aminomethyltransferase [Thermotoga neapolitana DSM 4359]
Length = 363
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 97/287 (33%), Gaps = 60/287 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ + F+ ++T D +P A + + G I+ ++ +I + I
Sbjct: 49 SHMGEIVVEGQETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGIVDDLVVYRISHEKAI 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEHTFSN----------- 112
+ ++ + + + + K+ + V + ++++ +
Sbjct: 109 MVVNAANIEKDYEWI---KVHAKNFNVEVRNVSDETALVAFQGPKSQETLQRVVDIDLEG 165
Query: 113 ---SSFIDERFSIADVLLHRTWGHNEK-------IASDIKTYHEL--------------- 147
SF R VL+ RT E S K + L
Sbjct: 166 IGYYSFQWGRLDGERVLVSRTGYTGEDGFELMMNAESAAKIWDTLVEIAGNVDGKPAGLG 225
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
R+ + D + P + + + + + K ++G+E + ++ + + +
Sbjct: 226 ARDVCRLEASYLLYGQDM-DESTNPFEVGLSWV--VKMNKD-FVGKE--ALLKLKEKVER 279
Query: 203 RPMIITGTD-DLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
+ + + + + G +L + E+G + ALA+
Sbjct: 280 KLVALELSGRRIARKGYTVLKEGKEVGKITSGNFSPTLGKSIALALV 326
>gi|307152524|ref|YP_003887908.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822]
gi|306982752|gb|ADN14633.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822]
Length = 376
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 53/307 (17%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE------------- 62
G+ I LQ ++ +++ + A+ + +L PQG I+ ++ E
Sbjct: 68 GQDIIKQLQELVPSNLSRIQAGQAQYTVLLNPQGGIIDDIIVYYQGEKNGQQEVTLIVNA 127
Query: 63 -------------------------DTFILEIDRSKRDSLIDKLLFY-----KLRSNVII 92
+ ++ + + +S + + KL ++
Sbjct: 128 ATTEKDKTWILEHISQSVEFADLSQEKALIAVQGPQAESFLQSFVKEDLSGVKLFEHLKA 187
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ G + +D + L R + LR+
Sbjct: 188 TLLDQPGFIARTGYTGEDGFEIMVDPEIA---QQLWRKLSDAGVTPCGLGARDTLRLEAA 244
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D T P +A + L + K +IG+ V+ + + + + R+ +
Sbjct: 245 LALYGQDI-DDTTTPLEAGLGWLVHLKTLKEDFIGRSVLEKQKAQGVSRRLVGVEMEGRY 303
Query: 213 LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ G P++++ +G + ALA + + K + + K
Sbjct: 304 IARHGYPVISNSKIVGEVTSGTLSPTLGIPVALAYVPTELSEVGQKLEIEIRGKTYPGKV 363
Query: 267 SFPHWYK 273
+Y+
Sbjct: 364 VKKPFYR 370
>gi|332140420|ref|YP_004426158.1| putative aminomethyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550442|gb|AEA97160.1| putative aminomethyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 77
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
V LS+ I + G+ A +L IT ++ L K AR A +GK ++++
Sbjct: 16 VDLSDTMVISLEGEQADSYLHGQITVNINKLDDKSARHFAHCDNKGKTWSTGYVTRL 72
>gi|168701893|ref|ZP_02734170.1| glycine cleavage system T protein [Gemmata obscuriglobus UQM 2246]
Length = 358
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G + FL+ + T V T+ R + G IL L+ ++ +F
Sbjct: 51 SHMARVNFDGPDVLAFLERVFTNSVATMKAGQVRYGLVCKEDGGILDDILVYRLPG-SFA 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------INGVVLSWNQEHTFS 111
++ S R+ ++ + R+ + +E+ + V + + +
Sbjct: 110 AVVNASNREKILAWFA--QQRTGLAVEVDDRTPATTMIAVQGPKAVELVAGVFADDVSAL 167
Query: 112 NSSFIDERF------------------------SIADVLLHRTWGHNEKIASDIKTYHEL 147
F + L + + + L
Sbjct: 168 KYYFATPSHYLGSPCVVSRTGYTGEDGFEVIVPNALGEPLWNEFVAKGAVPCGLGARDTL 227
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ + + + P A + + L KG ++G++ + + + + I
Sbjct: 228 RLEAAMPLYGHELNEG-VNPIQAGLAW--AVKLDKGDFLGRDAIQKAATATEPVRVGLEI 284
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHGVR 263
G G P+L +G + K+LA+ ++ A+ + + + G +
Sbjct: 285 EGKRAARE-GCPVLAGGRPVGGVTSGSLCPWLDKSLAMGYVEPAAAAVGTKLEVDLRGAK 343
Query: 264 VKASF 268
+ A+
Sbjct: 344 LPATV 348
>gi|117619425|ref|YP_856254.1| glycine cleavage system aminomethyltransferase T [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166221535|sp|A0KJ03|GCST_AERHH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|117560832|gb|ABK37780.1| glycine cleavage system T protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 365
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 47/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FLQ ++ DV L + A S +LTP+G ++ + + E +
Sbjct: 50 SHMTIVDLTGERVKAFLQHLLANDVAKLTVFGKALYSGMLTPEGGVIDDLITYYLGETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + V + +P ++ + F E+ + +
Sbjct: 110 RLVVNSATREKDLAWIRHHAQDFGVTVTERPELAMIAVQGSNAKAKAAKVFSAEQNAAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + N + LR+
Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEDGYEIVVPQEQACDLWQALLDNGVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P A M + +IG+ + + K ++
Sbjct: 230 EAGMNLYGQDM-DETVSPLAANMAWTIAWEPSDRQFIGRAALEAQKAAGSQPKLVGLVME 288
Query: 210 TDDLPPSGSPIL----TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ SG P+ + G + ++A+AR+ + D + + +
Sbjct: 289 EKGVLRSGMPVTFTTAAGEEREGVITSGSFSPTLGYSIALARVPR-DIGEQASVEIRKKL 347
Query: 262 VRVKASFPH 270
V VK + P
Sbjct: 348 VTVKVTKPA 356
>gi|15606995|ref|NP_214377.1| hypothetical protein aq_2005 [Aquifex aeolicus VF5]
gi|14916901|sp|O67808|Y2005_AQUAE RecName: Full=Uncharacterized protein aq_2005
gi|2984242|gb|AAC07770.1| putative protein [Aquifex aeolicus VF5]
Length = 149
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 18/130 (13%)
Query: 1 MSSVYLSNQSFIKVCG-------------KSAIPFLQAIITADVLTLPYKIARGSAILTP 47
M + L +S IKV G + FL ++T D+ +L + L
Sbjct: 1 MKWIDLK-RSKIKVYGKPVKMLMKGLTAPEEHTHFLHGLLTNDIKSLKPYTFNYNLWLKQ 59
Query: 48 QGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--GVVLSWN 105
G+ + F + KI +D +IL+ + D +I++ KL V E N V +
Sbjct: 60 NGQPIADFFVYKI-KDYYILDTEEP-ADFVINEFNRLKLSLKVYFEDLTPNYKHVFIYGE 117
Query: 106 QEHTFSNSSF 115
F F
Sbjct: 118 GAEEFVKEKF 127
>gi|291457947|ref|ZP_06597337.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419491|gb|EFE93210.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 363
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 101/309 (32%), Gaps = 54/309 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ LQ ++T + + AR S + +G + ++ K E+ +
Sbjct: 51 SHMGEVLCQGPDALANLQKLLTNNFDNMVDGQARYSLMCNEKGGCVDDLIVYKRGENDYF 110
Query: 67 LEIDRSKRDSLIDKLL--------------------------FYKLRSNVIIEIQ-PING 99
+ ++ + +D +L LR + E P
Sbjct: 111 IVVNAANQDKDFQWMLDHQFGDAKFTNVSKDYAQIALQGPKAMEILR-KLTTEDNIPKKY 169
Query: 100 VVLSWNQE------------HTFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTY 144
+N E +T + + A+ + + ++ I +
Sbjct: 170 YHAVFNAEVAGMPCIVSKTGYTGEDGVELYLENQYAEKMWDKLLEAGKEEGLIPCGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KR 203
LR+ + + I P + ++ + + K +IG+ + I+ + + KR
Sbjct: 230 DTLRMEAAMPLYGHEM-NDEITPLETGLNF--AVKMDKPDFIGK---AAIEAKGEPKIKR 283
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+ + +L D +G +A+A +D + + + ++V
Sbjct: 284 VGLKVTGRGVIREAEDVLADGKVVGHTTSGTHCPFLGYPVAMALVDPKYSEVGQKLEVSV 343
Query: 260 HGVRVKASF 268
G V+A
Sbjct: 344 RGRSVEAEV 352
>gi|21674602|ref|NP_662667.1| glycine cleavage system T protein [Chlorobium tepidum TLS]
gi|31340145|sp|Q8KBJ9|GCST_CHLTE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|21647801|gb|AAM73009.1| glycine cleavage system T protein [Chlorobium tepidum TLS]
Length = 365
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF
Sbjct: 49 SHMGNFYVRGARALEFLQYMTTNDLAKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTF--------------- 110
L ++ S + D L + V +E +++ +F
Sbjct: 109 LIVNASNCEKDFDWLSSHIGQFEGVALENHTSELSLIALQGPKSFDILARVFPGAGIDKL 168
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTY------------------- 144
+ FI F A++++ RT E + +
Sbjct: 169 GSFHFIKLPFEGAEIMVARTGYTGEAGVEICLPNERAVALWSALMEAGKSDGIQPIGLGA 228
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + + P +A + + + L K +IG++ +++ RK
Sbjct: 229 RDTLRLEMGYSLYGHEIERD-VNPLEARLKWV--VKLNKPNFIGKQACEQVEI--NPRKS 283
Query: 204 PMIITGTD-DLPPSGSPILTDDI-EIGTLGV 232
+ + +P + D EIG +
Sbjct: 284 VVGFSLEGRAIPRQHFKVYNSDKQEIGEVCS 314
>gi|302522038|ref|ZP_07274380.1| glycine cleavage system T protein [Streptomyces sp. SPB78]
gi|302430933|gb|EFL02749.1| glycine cleavage system T protein [Streptomyces sp. SPB78]
Length = 379
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/298 (16%), Positives = 100/298 (33%), Gaps = 57/298 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT
Sbjct: 57 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 115
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100
+++ + S +++D L Y L R I ++G+
Sbjct: 116 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 175
Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143
+ + + R A + WG + + +
Sbjct: 176 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 235
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + + + P DA + + + K G ++G+ + +
Sbjct: 236 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKTSNEGRFVGRAALEAAAEKAA 292
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
RK +I +P +G ++ D +G + K LA+A +D A
Sbjct: 293 STPPRKLVGLIAAGRRVPRAGYAVVADGRVVGEVTSGAPSPTVGKPLAMAYVDAAHAA 350
>gi|256825451|ref|YP_003149411.1| glycine cleavage system aminomethyltransferase T [Kytococcus
sedentarius DSM 20547]
gi|256688844|gb|ACV06646.1| aminomethyltransferase [Kytococcus sedentarius DSM 20547]
Length = 372
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/315 (14%), Positives = 99/315 (31%), Gaps = 57/315 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A F+ + T D+ + A+ + P G ++ + ++ +
Sbjct: 56 SHMGKVRVSGPRAADFVNSCFTNDLKRIEPGKAQYTMCCAPDGGVIDDLIQYLRSDEDVL 115
Query: 67 LEIDRSKRDSLIDKLLFYKL-RS-NVIIEIQPINGVVLSWNQE-------------HTFS 111
L + S + + L R+ V + + +++ H
Sbjct: 116 LVPNASNATEVAELLTAEAADRAPGVTVSDEHTQHGIIAVQGPKADEVMAELGLPTHHPD 175
Query: 112 NSSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
SF+D ++ +V++ R+ EK + + +
Sbjct: 176 FMSFLDAQWESHEVVVCRSGYTGEKGYEIICPWDATPALWEALVAAAEERGGLPAGLGAR 235
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--RIQHRNIIRK 202
LR G + + K + G E ++ R +
Sbjct: 236 DTLRTEMGYPLHGHELSREISPVMARNAW---AVGWDKESFWGSEALAEQRAAKSGRLN- 291
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257
R + +TG +P G+ I ++ IG + + IA +D+ H + +
Sbjct: 292 RGLKVTGRG-IPREGNEIKDSEGTVIGVVTSGTFSPTLGHGIGIALVDR-SHTFGDQVVI 349
Query: 258 TVHG--VRVKASFPH 270
V G V + P
Sbjct: 350 DVRGREVPAELVKPP 364
>gi|320165309|gb|EFW42208.1| dimethylglycine dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 863
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 88/295 (29%), Gaps = 66/295 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + +V G A FLQ ++ +P + +L +G I++ DT+
Sbjct: 521 TSFAKFQVQGADAERFLQRTAAGNMA-VPIGKVVYTGMLNNRGGYETDVTITRTAADTYF 579
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVII-EIQPINGVVLSWN---------------QEHT 109
+ ++ +D + L V I ++ V++ T
Sbjct: 580 VVSPTAQAVRDLDWMNKSILPDERVSITDVTSAYAVIVVMGPNSRTLLSRLQSPKCDSPT 639
Query: 110 FSNSSFIDERFSIA--------------------DVLLHRTWGHNE-------------- 135
NS F + F L + E
Sbjct: 640 SENSVFASKNFPFGTSQLVDLGFTTIRATRVTYVGELGWELYVPQEMACSLFDEILAAGK 699
Query: 136 KIASDIKTY---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
++ + Y LRI G + S + P +A + + + KG ++G+E +
Sbjct: 700 DLSVALGGYYAIDSLRIEKGYRAWGAELT-SEVTPIEAGLSF--AVDMNKGDFVGREALV 756
Query: 193 RIQHRNIIRKRPMIITGTDDLPP-------SGSPILTDDIEIGTLGVVVGKKALA 240
+ + KR + D P I+ D +G + A+
Sbjct: 757 AQKKSG-VSKRLVSFMVDDGAEPGDHACMWGDEAIVRDGKVVGFITSASYGYAVG 810
>gi|89055340|ref|YP_510791.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1]
gi|88864889|gb|ABD55766.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1]
Length = 812
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 100/318 (31%), Gaps = 58/318 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S+ I+V G A FL I ++ ++P + L +G I I+++ +
Sbjct: 484 LYDMSSFGKIRVDGPDAEAFLNRIAAGNM-SVPVGKIVYTQFLNMRGGIEADVTITRLAQ 542
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVLSWNQ----------EHTF 110
D++ + + + L + R V+I +I V+ H +
Sbjct: 543 DSYFIVTPAATLIRDMAWLKMNR-RDEVVILSDITASEAVICVMGPNSRALMQSVSPHDW 601
Query: 111 SNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146
SN++F R + L + ++ A +T HE
Sbjct: 602 SNAAFPFGVAQQVDIGLGIARAHRVTYVGELGWELYVSADQAAHVFETLHEAGADHGLRL 661
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI D +A + +S TK +IG + V+R +
Sbjct: 662 CGLHMMDSARIEKAFRHFGHDITGEDHV-IEAGLGF--AVSKTKNNFIGADAVARKRDEG 718
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249
+ + +T + + PI+ + + + G + +
Sbjct: 719 LQMRMVQFKLTDPEAMLFHAEPIIRNGEVVSYITSGNYGHTLGGAIGMGYVPCPGETPAE 778
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + V G RV A
Sbjct: 779 MLASAYEIEVAGTRVAAE 796
>gi|254774951|ref|ZP_05216467.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 367
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + +++D
Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + ++++ L RS ++ +Q V+ ++
Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTISNLHRSYAVLAVQGPRSADVLAELGLPTDMDYMAY 174
Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148
D F V + RT W + + LR
Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + P I P A I K + G++ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L +G +L D +G +A+A ID D ++ G +TV
Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALID-TDADVRDGQEVTVEVR 348
Query: 261 --GVRVKASFPH 270
+ P
Sbjct: 349 GRAATCEVVRPP 360
>gi|296166085|ref|ZP_06848530.1| glycine cleavage system T protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898494|gb|EFG78055.1| glycine cleavage system T protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 365
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A F+ + +T D+ + A+ + T G ++ + +++D
Sbjct: 53 SHLGKALIRGPGAAEFVNSTLTNDLSRIGPGKAQYTLCCTESGGVIDDLIAYYVDDDEIF 112
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + ++++ L RS ++ +Q V+ +
Sbjct: 113 LVPNAANTAAVVEALQGVVRPGLTITNEHRSYAVLAVQGPRSADVLDGLGLPTGMDYMGY 172
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D ++ V + RT E + + LR
Sbjct: 173 ADATYAGVPVRVCRTGYTGEHGYELLPPWDSAAVVFDALAGAVAAAGGEPAGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A I K + G++ + + R+ R +
Sbjct: 233 TEMGYPLHGHELALD-ISPLQARCGW--AIGWKKDAFFGRDALLAEKVAG-PRRLLRGLR 288
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L + +G +A+A ID D I+ G +TV
Sbjct: 289 MVGRGVLRP-GLTVLAGETPVGVTTSGTFSPTLQVGIALALID-ADAGIEDGQRVTVDIR 346
Query: 261 --GVRVKASFPH 270
+ P
Sbjct: 347 GRAAECEVVRPP 358
>gi|207744781|ref|YP_002261173.1| aminomethyltransferase (glycine cleavage system tprotein)
[Ralstonia solanacearum IPO1609]
gi|206596191|emb|CAQ63118.1| aminomethyltransferase (glycine cleavage system tprotein)
[Ralstonia solanacearum IPO1609]
Length = 337
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F
Sbjct: 13 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 72
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + + +V Q I R S +
Sbjct: 73 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTIAPRRSDNNA 110
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + KTY L P T + + P +A ++G+
Sbjct: 111 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFAAIDGV------ 156
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 157 --GEIMVARTGYTG 168
>gi|238060345|ref|ZP_04605054.1| glycine cleavage system aminomethyltransferase T [Micromonospora
sp. ATCC 39149]
gi|237882156|gb|EEP70984.1| glycine cleavage system aminomethyltransferase T [Micromonospora
sp. ATCC 39149]
Length = 376
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 88/298 (29%), Gaps = 49/298 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ +V G A F+ ++ D+ + A+ + G ++ + +D
Sbjct: 63 SHLGKARVTGPGAADFVNVCLSNDLGRIGPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 122
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106
L + + ++ +L V++ + VL+
Sbjct: 123 FLVPNAANTAEVVRRLRA-AAPERVVVTDEHEEHAVLAVQGPRSAELLGALGLPTDHGYM 181
Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146
T + + R L + + +A+ + Y
Sbjct: 182 SFRAGTLAGAELTVCRTGYTGELGYELVVPAGHAVAVWDALAATGEAYELRACGLAARDT 241
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR G D P I P A + K + G++ + + R +
Sbjct: 242 LRTEMGYPLHGQDLSPE-ITPVQARSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGL 298
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+P G + D +GT+ K+ +A+A +D + +G + V
Sbjct: 299 TAVDRAIPRPGMKLYVGDACVGTVTSGTFSPTRKQGIALALVDTAAD-LAEGDTVEVD 355
>gi|13540889|ref|NP_110577.1| aminomethyltransferase (glycine cleavage system T protein)
[Thermoplasma volcanium GSS1]
Length = 362
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 108/319 (33%), Gaps = 65/319 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FL + V +L +A L +G+++ ++ ++ D++
Sbjct: 51 SHMGDITVRGREAGKFLDHMFPTKVSSLNDGECIYTAFLNEKGQMIDDTIVYRMSSDSYF 110
Query: 67 -----------------------------------LEIDRSKRDSLIDKLLF----YKLR 87
+ + + +S+I +L F Y
Sbjct: 111 FVPNAGTTDKIYEWVTKNSKGFDVKIENVSSKISSIALQGPESESVISELGFSYPGYFKF 170
Query: 88 SNVIIE----IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASD 140
+ V + I N +++S FI A L + EK +
Sbjct: 171 TYVNGKYKNAITGKNDIIISGTGYTGEKGVEFIIPN-EYAVELWRKLLSLVEKRSGLPCG 229
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQEVVSRIQHR 197
+ + LR+ G++ DF + P++A IS G +IG++ S R
Sbjct: 230 LGSRDTLRMEKGMLLSGHDFNENRD-PYEA------SISFIVNNDGDFIGKK--SLEDRR 280
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK--VDHAI 251
++ +D +P SG+ + + +GTL K +A+ IDK
Sbjct: 281 KEDKQIFRGFILSDGIPRSGNSVKVNGKVVGTLTSGSISPVLNKGIALGYIDKEYSKEGT 340
Query: 252 KKGMALTVHGVRVKASFPH 270
K + + S P
Sbjct: 341 KVFVEIRGKDHEATVSRPK 359
>gi|14324271|dbj|BAB59199.1| aminomethyltransferase [Thermoplasma volcanium GSS1]
Length = 359
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 108/319 (33%), Gaps = 65/319 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FL + V +L +A L +G+++ ++ ++ D++
Sbjct: 48 SHMGDITVRGREAGKFLDHMFPTKVSSLNDGECIYTAFLNEKGQMIDDTIVYRMSSDSYF 107
Query: 67 -----------------------------------LEIDRSKRDSLIDKLLF----YKLR 87
+ + + +S+I +L F Y
Sbjct: 108 FVPNAGTTDKIYEWVTKNSKGFDVKIENVSSKISSIALQGPESESVISELGFSYPGYFKF 167
Query: 88 SNVIIE----IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASD 140
+ V + I N +++S FI A L + EK +
Sbjct: 168 TYVNGKYKNAITGKNDIIISGTGYTGEKGVEFIIPN-EYAVELWRKLLSLVEKRSGLPCG 226
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQEVVSRIQHR 197
+ + LR+ G++ DF + P++A IS G +IG++ S R
Sbjct: 227 LGSRDTLRMEKGMLLSGHDFNENRD-PYEA------SISFIVNNDGDFIGKK--SLEDRR 277
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK--VDHAI 251
++ +D +P SG+ + + +GTL K +A+ IDK
Sbjct: 278 KEDKQIFRGFILSDGIPRSGNSVKVNGKVVGTLTSGSISPVLNKGIALGYIDKEYSKEGT 337
Query: 252 KKGMALTVHGVRVKASFPH 270
K + + S P
Sbjct: 338 KVFVEIRGKDHEATVSRPK 356
>gi|17548010|ref|NP_521412.1| glycine cleavage system aminomethyltransferase T [Ralstonia
solanacearum GMI1000]
gi|24636858|sp|Q8XUA0|GCST_RALSO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|17430316|emb|CAD17081.1| probable aminomethyltransferase (glycine cleavage system tprotein)
[Ralstonia solanacearum GMI1000]
Length = 375
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ ++ L A + +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNIDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + I+ + Q I R S +
Sbjct: 111 RLVVNAGTAPTDIEWIT----------------------AQNAAAGTGVAITPRRSDNNA 148
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + K Y L P T + + P +A ++G+
Sbjct: 149 GAEPLGIVAVQGPNARAKAYAAL--------PGTQAVGEALKPFNAGFATIDGV------ 194
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 195 --GEIMVARTGYTG 206
>gi|149204829|ref|ZP_01881791.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. TM1035]
gi|149141699|gb|EDM29754.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. TM1035]
Length = 815
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/318 (16%), Positives = 98/318 (30%), Gaps = 58/318 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S+ ++V G A FL + AD+ ++ + L +G I ++++ E
Sbjct: 487 LYDMSSFGKLRVEGAGAEAFLNHVCGADM-SVAPGRIVYTQFLNAKGGIEADVTVTRLSE 545
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLS-----------------W 104
+++ + R + L + V+I ++ GV+
Sbjct: 546 TAYLVVTPAATRLADETWLRRHVGAHPVVITDVTAGEGVLAVMGPNARDLLRAVSPDDFS 605
Query: 105 NQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL--------- 147
N H F + I+ R S L + + + H
Sbjct: 606 NDAHPFGQARQIEIGMGVARAHRVSYVGELGWEIYVSADMCGHVFEVLHAAGADHGLRLC 665
Query: 148 --------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
RI D +A + ++ K +IG+E V +
Sbjct: 666 GMHAMDSCRIEKAFRHFGHDITCEDHV-LEAGLGF--AVATGKADFIGREAVL-AKRAAG 721
Query: 200 IRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249
+ +R + TD P P+L D +G L G L + +
Sbjct: 722 LERRLVQFRLTDPEPMLYHNEPLLRDGEIVGYLSSGAYGHHLGGAMGLGYVPCAGESAEQ 781
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + V GVRVKA
Sbjct: 782 VLASSYEVDVAGVRVKAE 799
>gi|296389147|ref|ZP_06878622.1| glycine cleavage system T protein [Pseudomonas aeruginosa PAb1]
Length = 373
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|107101893|ref|ZP_01365811.1| hypothetical protein PaerPA_01002938 [Pseudomonas aeruginosa PACS2]
Length = 373
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|313110641|ref|ZP_07796515.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016]
gi|310883017|gb|EFQ41611.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016]
Length = 373
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQECYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|110639205|ref|YP_679414.1| glycine cleavage system aminomethyltransferase T [Cytophaga
hutchinsonii ATCC 33406]
gi|110281886|gb|ABG60072.1| aminomethyltransferase [Cytophaga hutchinsonii ATCC 33406]
Length = 369
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ +Q I T D LP + +A+ P+G I+ L+ I E+++
Sbjct: 56 SHMGEFTLKGPKALEVIQRITTNDASVLPIGKVQYTALTNPKGGIIDDLLVYHIGEESYY 115
Query: 67 LEIDRSKRDS----LIDKL----------------------LFYKLRSNVI--------- 91
+ ++ S + + L +++ + +
Sbjct: 116 IVVNASNIEKDKAWFLKNLAAEGADFQDISENTCLFAVQGPKAHEVLAQLTTYPVAGMEY 175
Query: 92 -----IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDIKTY 144
+E+ V+++ DV L + +
Sbjct: 176 YSCAHMELAGHKDVLVATTGYTGAGGFEVYVSNDIAKDVWTKLMQAGEAVGMKPVGLGAR 235
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D T P +A + + TK + G +++ + + R+
Sbjct: 236 DTLRLEMGYCLYGNDITDETT-PLEAGLGWI--TKFTK-TFTGSDILQEQKKNGVARQLV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+P + +IG + K + + ++K A + + +
Sbjct: 292 GFEMIERGIPRGHYELADAAGNKIGEVTSGTQSPCLGKGIGMGYVEKKYAAAGTELFVNI 351
Query: 260 HGVRVKASF 268
G +KA
Sbjct: 352 RGKLIKAQV 360
>gi|163739830|ref|ZP_02147237.1| FAD dependent oxidoreductase, putative [Phaeobacter gallaeciensis
BS107]
gi|161386864|gb|EDQ11226.1| FAD dependent oxidoreductase, putative [Phaeobacter gallaeciensis
BS107]
Length = 816
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/315 (16%), Positives = 96/315 (30%), Gaps = 56/315 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G A FL I A++ ++P + L +G I ++++ E +
Sbjct: 491 MSSFGKIRVEGPDAEIFLNYICGANL-SVPAGKIVYTQFLNARGGIEADVTVTRLSETAY 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
++ R + ++ + V+I ++ GV+
Sbjct: 550 LVVTPAVTRLTDQTWMMRHVGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNAV 609
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
QE R + L + + +T HE
Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSADMAGHAFETLHEAGQDMGLKLCGMH 669
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D DA + + K +IG+ V + + +
Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKADFIGKSAVLARKETGPMNR 726
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA--------RIDKVDHAIKK 253
+T ++ L PI+ D +G L LA A + +
Sbjct: 727 MLQFKLTESEPLLFHNEPIIRDGKYVGYLSSGNYGHTLAAAIGMGYVPCEGESAADVLGS 786
Query: 254 GMALTVHGVRVKASF 268
+ V GV+VKA
Sbjct: 787 SYEIDVCGVKVKAEV 801
>gi|116050390|ref|YP_790793.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115585611|gb|ABJ11626.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 373
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADAALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPNELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|326387705|ref|ZP_08209311.1| glycine cleavage system aminomethyltransferase T [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207751|gb|EGD58562.1| glycine cleavage system aminomethyltransferase T [Novosphingobium
nitrogenifigens DSM 19370]
Length = 375
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 110/306 (35%), Gaps = 49/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G L+A++ D+ L R S +L +G IL +++ D
Sbjct: 59 SHMGQLVFSGDDVAEALEALLPGDIRGLKPGRMRYSLLLDDKGGILDDLIVTNTG-DALA 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLSWNQEHTF- 110
+ ++ + ++ + + + L ++V++ Q + + LS + F
Sbjct: 118 MVVNGAMVEADVAHIRAH-LPASVVLHHITDHALLALQGPSSAQVLEAIGLSGPGQLGFM 176
Query: 111 --------------SNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
S S + E +I L+ H+E + LR+
Sbjct: 177 EWGRFEWHGASLGVSRSGYTGEDGFEISVPHAILAELVDVLAAHDEVHPIGLGARDSLRL 236
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ D S I P +A + +G + G ++ + + +R ++
Sbjct: 237 EAGLPLYGHDLT-SKIEPVEAGLGFAVARRRREQGGFPGHGRIAAVLEQGPACRRVGLLV 295
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262
G+ +L D IGT+ G A +A+A +D A+ +++ + G
Sbjct: 296 EGRLAAREGAVVLAGDTPIGTVTS--GGFAPTLGRPIAMAYVDAAHAALDTPLSIDLRGR 353
Query: 263 RVKASF 268
R+ A+
Sbjct: 354 RLAATV 359
>gi|309790894|ref|ZP_07685437.1| glycine cleavage system T protein [Oscillochloris trichoides DG6]
gi|308227082|gb|EFO80767.1| glycine cleavage system T protein [Oscillochloris trichoides DG6]
Length = 351
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 98/311 (31%), Gaps = 55/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FLQ I+T+DV + + + + P G I+ I + E+ F+
Sbjct: 37 SHMGRFMVRGPQAEEFLQYIVTSDVSAIALGQSTYALLCQPDGGIIDDLFIYHLPEE-FL 95
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD-- 124
+ + S R+ + + ++ +EI + + + + S A
Sbjct: 96 VVANASNRERVWHWFQEHA--ADFDVEIVGRSERWAMLALQGPGAEDLLVQAEESEAGSL 153
Query: 125 -----------------VLLHRTWGHNEK---------IASDIK--------------TY 144
L+ RT E A D
Sbjct: 154 GSMPFHGVALSSLFGFTTLVARTGYTGEDGFELFFDAIHAEDFWDKLVALGAKPCGLGAR 213
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR + + TI P++A + + + L KG ++G+ ++ I+ R + R+
Sbjct: 214 DSLRFEPCLALYGHEI-SDTINPYEARLGWV--VKLDKGDFVGRSALAAIKERGVSRRLT 270
Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMAL 257
+ P+ +G + V +A + + + +
Sbjct: 271 GFEMVGKGIARGDYPVHNLAGELVGFVTTGMPAPTVGRPLGMAYVPTELSREGSEFDIII 330
Query: 258 TVHGVRVKASF 268
VR +A
Sbjct: 331 REKPVRARAIR 341
>gi|262173541|ref|ZP_06041218.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus MB-451]
gi|261890899|gb|EEY36886.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus MB-451]
Length = 376
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 105/310 (33%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D
Sbjct: 57 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117
+ ++ + ++ I L + L ++V +E+ ++ + +N F+D
Sbjct: 116 VVVNAACKEQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVANMLFMD 174
Query: 118 ERF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ A L R E + LR+
Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR
Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 294
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + +IG + ++A + + +
Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVR 354
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 355 GKMLPMTVEK 364
>gi|160942432|ref|ZP_02089739.1| hypothetical protein CLOBOL_07316 [Clostridium bolteae ATCC
BAA-613]
gi|158434684|gb|EDP12451.1| hypothetical protein CLOBOL_07316 [Clostridium bolteae ATCC
BAA-613]
Length = 362
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 100/307 (32%), Gaps = 50/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ + I+T D + R S + G ++ ++ + ++ ++
Sbjct: 51 SHMGEVLFEGPDALKNINYILTNDFTNMYDGQVRYSVMCYEDGGVVDDLIVYRYNQEKYL 110
Query: 67 LEIDRSKRDS----LIDKLLFYKLR-------SNVII-------------EIQPINGVVL 102
+ ++ + R+ + D L + S + I + + I
Sbjct: 111 VVVNAANREKDVNWMKDHLNGDVVFTDISDELSQLAIQGPNADAILRKLTKDEDIPEKYY 170
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYH 145
S+ E I + + + +NE I +
Sbjct: 171 SFVPEGIVGGIKCIVSQTGYTGESGYELYVNNEDAPKLWNMLLEAGEAEGLIPCGLGARD 230
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + + + I P + + + + K +IG++ + + + RKR
Sbjct: 231 TLRLEAAMPLYGHEM-DAAIHPLETGLKF--AVKMQKDDFIGKK--ALEEKSVLTRKRVG 285
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ + + D E+G A+A+A +D I + + V G
Sbjct: 286 LRMIGRGIARENEKVYAGDREVGWTTSGTHCPFLGYAIAMAILDLDCTEIGTKVEVEVRG 345
Query: 262 VRVKASF 268
R++A
Sbjct: 346 RRIEAEV 352
>gi|126730411|ref|ZP_01746222.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula
stellata E-37]
gi|126709144|gb|EBA08199.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula
stellata E-37]
Length = 814
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/317 (17%), Positives = 102/317 (32%), Gaps = 58/317 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S+ ++V G+ A FL + DV +P + L +G I ++++ E
Sbjct: 486 LYDMSSFGKLRVEGRDAAAFLNHVCGGDVD-VPAGRIVYTQFLNARGGIEADVTVTRLSE 544
Query: 63 DTFILEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQ----------EHTFS 111
F++ + R + L + R+ VI ++ V+ + FS
Sbjct: 545 TAFLVVTPAATRRADETWLRRHVGDRNAVIADVTAGEAVIAVMGPRARAVLEGCSDGDFS 604
Query: 112 NSS--FIDER---FSIADVLLHRT-------WGHNEKIASDIKTYHELRINHGIVDP--- 156
N++ F R + + +HR W + + L + G +
Sbjct: 605 NATNPFGTARQVHVGMGEARVHRVSYVGELGWEVYASADMAVHVFDAL-MAAGEPEGLRL 663
Query: 157 ------------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
D +A + + K +IG++ V +
Sbjct: 664 CGLHAMDSCRAEKAFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLAKREAG 720
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKVDH 249
+ R+ ++T + L PIL D +G L G L + D
Sbjct: 721 LDRRLVQFLLTDPEPLLYHNEPILRDGEIVGHLSSGAYGHALGGAIGLGYVPCTGESADA 780
Query: 250 AIKKGMALTVHGVRVKA 266
+ + V GVRV A
Sbjct: 781 LLSSAFEIDVAGVRVAA 797
>gi|302851348|ref|XP_002957198.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f.
nagariensis]
gi|300257448|gb|EFJ41696.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f.
nagariensis]
Length = 420
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 51/307 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK AI FL+ ++ D+ L S QG I+ +I+K+
Sbjct: 88 SLFDVSHMCGLTLKGKDAIKFLEGLVVGDIAGLKDGTGSLSVFTNEQGGIIDDTVITKVN 147
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSS-- 114
+ ++ RD + L + + V + + ++ +
Sbjct: 148 GQEIYVVVNAGCRDKDLAHLDKHLQAAKSKGLDVALTVHDDRSLLALQGPAAKDVLGALA 207
Query: 115 ---------FIDER-FSIADVLLHRT---------------WGHNEKIASDIKTYHE--- 146
F D R F +A + T H +A +
Sbjct: 208 PGVDLAAMYFSDFRTFDVAGIPCWVTRTGYTGEDGFEISVPSTHAVALAEKLTASERVRL 267
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
LR+ G+ D ++ P +A + G +G ++G +V+ +
Sbjct: 268 AGLGPRDSLRLEAGLCLYGNDL-NESLTPVEAGLAWTIGKRRREGFDFLGGDVIKKQLAE 326
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+ ++R ++ D +G + L A+ ++K K
Sbjct: 327 GVSKRRVGFVSSGAPARQHSVISTPDGQVVGEVTSGAFSPCLKKNIAMGYVEK--DFSKP 384
Query: 254 GMALTVH 260
G L V
Sbjct: 385 GTQLKVE 391
>gi|189500941|ref|YP_001960411.1| glycine cleavage system aminomethyltransferase T [Chlorobium
phaeobacteroides BS1]
gi|189496382|gb|ACE04930.1| glycine cleavage system T protein [Chlorobium phaeobacteroides BS1]
Length = 403
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ FLQ + T D L A+ + +L G I+ ++ +++ +T+
Sbjct: 85 SHMGSFYVRGDRALEFLQHMTTNDASVLKNGQAQYTLMLYSDGGIVDDLIVYRVDHETWF 144
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEHT---------------F 110
+ ++ R + L + V IE + +++ +
Sbjct: 145 IVVNAGNRQKDFEWLSGHIQDFEGVAIEDHSESLSLIALQGPKSKHILQRVLASSVCEQL 204
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKT 143
F+ F ++++ T EK +
Sbjct: 205 PAFHFLRTDFEGTEIMVACTGYTGEKGVEISVPDQSAELLWKTIIKEGEAFDIQPVGLGA 264
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + T P + + + L KG +IG+E + K
Sbjct: 265 RDTLRLEMGYPLYGHEITRET-NPMETRLRWV--TKLEKGEFIGREACVEAER--NPEKT 319
Query: 204 PMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232
+ + + P +L DD E+GT+
Sbjct: 320 LVGFSMEERAIPRQGYVLYDRDDNEVGTVCS 350
>gi|119504914|ref|ZP_01626991.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080]
gi|119459200|gb|EAW40298.1| aminomethyltransferase [marine gamma proteobacterium HTCC2080]
Length = 406
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 88/295 (29%), Gaps = 62/295 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A+ L ++T D+ L A G+++ I ++ E F+L
Sbjct: 77 IEGADALAMLDRMVTRDLNKLRINRVTYVAWCNDSGRMIDDGTIFRLGESKFLLTCGSPC 136
Query: 74 RDSLID-KLLFYKLRSNVI----IEIQPING-----VVLSWNQEHT------------FS 111
L L F +L S V + + G V+ + E T F+
Sbjct: 137 LAWLRKSALGFNRL-SIVEHTEALAALSLQGPTSFAVLKAMGLEATSALKPFDIGHYPFA 195
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHE----------------LRINHGI 153
+ R L + W +A + Y R+ G
Sbjct: 196 EGEIMISRTGFTGDLGYELWIE-PNLALTLWDCLYEAGANYGIQPYGEAATNMARLEAGF 254
Query: 154 VDPNTDFLPS--------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
+ P +F + P + + L + K + G+ + +
Sbjct: 255 IMPYMEFNEALKTVNFEYDQTPLELDLAWL--VDFKKPHFNGRRALLEQHKTG-PKTLLT 311
Query: 206 IITGTDDLPPSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAI 251
+ + P + + +D EIG + V ALA+ ++ + I
Sbjct: 312 KLNIEGNKPAEEALLYSDHDCGDEIGYVTSAMWSPSVKANIALAMINVEALSGDI 366
>gi|149179150|ref|ZP_01857719.1| aminomethyltransferase [Planctomyces maris DSM 8797]
gi|148842010|gb|EDL56404.1| aminomethyltransferase [Planctomyces maris DSM 8797]
Length = 365
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 92/270 (34%), Gaps = 49/270 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + G A FL ++T V +L R S + G IL L+ + D ++L
Sbjct: 54 HMGRLFFTGPDACRFLDRLLTNSVESLKPGQIRYSLVTNESGGILDDVLVYRFS-DFYML 112
Query: 68 EIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115
++ S R ++D + RS +V IE Q + +L+ + + +
Sbjct: 113 VVNASNRLKIVDWIE--GQRSGFDVRIEDQTRDKFMLALQGPQSLAILNPLVEAELSEIK 170
Query: 116 ----IDERFSIADVLLHRTWGHNE-------KIASDIKTY-------------------- 144
I+ R S D L+ RT E + +
Sbjct: 171 YYYGIETRVSGVDALVSRTGYTGEDGFEVVLDQSEGAALWERLIAGGEPSGLIPAGLGCR 230
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ + + + P+ A ++ + L +IG+E + + R+ + R
Sbjct: 231 DTLRLEAAMPLYGHEL-DESTDPYTAGLNF--AVKLKAADFIGKEALIAAKARDDRKVRV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
GS + + D ++G +
Sbjct: 288 GFTLEGKRAAREGSLLFSGDQQVGMVTSGS 317
>gi|49088832|gb|AAT51611.1| PA2442 [synthetic construct]
Length = 374
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADVALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + G+
Sbjct: 292 GFLPQGRMPVREGAEIIDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSGVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|41408049|ref|NP_960885.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|59797820|sp|Q73YK4|GCST_MYCPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|41396404|gb|AAS04268.1| GcvT [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 367
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 58/314 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + +++D
Sbjct: 55 SHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + ++++ L RS ++ +Q V+ ++
Sbjct: 115 LVPNAANTAAVVEALQGAAPAGVTVRNLHRSYAVLAVQGPRSANVLAELGLPSDMDYMAY 174
Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148
D F V + RT W + + LR
Sbjct: 175 ADTSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + P I P A I K + G++ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSPD-ISPLQARCGW--AIGWKKEAFFGRDALLAEKEAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ G L +G +L D +G ALA+ D ++ G +TV
Sbjct: 291 MVGRGVL-RAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALINTD---ADVRDGQEVTVD 346
Query: 261 ----GVRVKASFPH 270
+ P
Sbjct: 347 VRGRAATCEVVRPP 360
>gi|207722208|ref|YP_002252645.1| aminomethyltransferase (glycine cleavage system tprotein). (partial
sequence c terminus) [Ralstonia solanacearum MolK2]
gi|206587383|emb|CAQ17966.1| aminomethyltransferase (glycine cleavage system tprotein). (partial
sequence c terminus) [Ralstonia solanacearum MolK2]
Length = 357
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F
Sbjct: 33 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + + +V Q I R S +
Sbjct: 93 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTITPRRSDNNA 130
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + KTY L P T + + P +A ++G+
Sbjct: 131 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATVDGV------ 176
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 177 --GEIMVARTGYTG 188
>gi|326332994|ref|ZP_08199250.1| sarcosine oxidase, alpha subunit [Nocardioidaceae bacterium
Broad-1]
gi|325949188|gb|EGD41272.1| sarcosine oxidase, alpha subunit [Nocardioidaceae bacterium
Broad-1]
Length = 636
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/335 (17%), Positives = 98/335 (29%), Gaps = 72/335 (21%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I+V G A FL I T L AR + TP G + + +I
Sbjct: 296 MDATTL---GKIEVWGSDAGEFLNRIYTNAFKKLAPGSARYGVMCTPDGMMFDDGVTLRI 352
Query: 61 EEDTFILEIDRSKRDSLIDKL---------LFYKLRSNVI-------------------- 91
+E + + ++D L ++V
Sbjct: 353 DEGRYFMTTTTGGAAKVLDWLEEWHQTEWPTLDVSFTSVTEQWATVAVVGPRSREVIAKI 412
Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIA 138
+++ +++ + S R S + L + W
Sbjct: 413 APDLDVSNEAFPFMTFRETTLASGIPARVCRISFSGELAFEVNVETWFGPQVWKEIHAAG 472
Query: 139 SDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+ +T H LR G D T+ P DA M+ + +S K ++G+
Sbjct: 473 QEWAITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FVGKRSY 528
Query: 192 SRIQHRNIIRKRP---------MIITGTDDLPPSGSPILTDDIEI---GTLGVVVGKKAL 239
SR RK + L +G+PI D + G + AL
Sbjct: 529 SRADTSRTDRKHLVSVLPVDKSFRLPEGTQLVEAGTPITPADGPVPMLGHVTSSYHSAAL 588
Query: 240 ----AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
A+A I + I + + V V
Sbjct: 589 GRSFALALIKDGRNRIGQTLVAPVGDRLVDVVVAE 623
>gi|294084485|ref|YP_003551243.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664058|gb|ADE39159.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 384
Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 105/309 (33%), Gaps = 64/309 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69
+++ G A F+Q + D+ + + +G +L ++ ++ E+ F +
Sbjct: 71 VEITGPDASRFVQMLSPRDISKCAVGQCKYVILTNEKGGVLNDPVMLRLGENHFWFSLAD 130
Query: 70 ----------------DRSKRDSLIDKLLF---------YKLRSNVIIEIQPINGVVLSW 104
D + + + L + L +V+ +++ W
Sbjct: 131 SDILFWAQGVAVNAGMDVTITEPDVSPLQLQGPRSGEIAHALFGDVVSDLR------YYW 184
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------- 147
E F + R + L + + + + + +
Sbjct: 185 LAELEFEGIPLVVSRTGWSSELGYEIYLRDGSKGD--QLWEAIMKAGAPFGLKPGHTSSI 242
Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI G++ + D +T P + +D L + + +IG+ +++I+ + RK+ +
Sbjct: 243 RRIEGGMLSYHADMDINT-NPFELGLDRLIDLDMDAD-FIGKAALTKIRQHGVTRKQVGL 300
Query: 207 ITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+ L S + P+ +D IG + + ALA+ I D+ +
Sbjct: 301 VIDGAPLAASNTTFWPVESDGKVIGKVTSAIYSPRLEQNIALAMLDIAYADNGTQAFAET 360
Query: 258 TVHGVRVKA 266
+V + V
Sbjct: 361 SVGRLPVTV 369
>gi|300702545|ref|YP_003744145.1| glycine cleavage complex protein t, aminomethyltransferase,
tetrahydrofolate-dependent [Ralstonia solanacearum
CFBP2957]
gi|299070206|emb|CBJ41497.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Ralstonia solanacearum
CFBP2957]
Length = 375
Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A + +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + + +V Q + R S +
Sbjct: 111 RLVVNAGTAPT-------------------DLEWIVA---QNAAAGTGVTVTPRRSDNNT 148
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + KTY L P T + + P +A ++G+
Sbjct: 149 GPEPLGIVAVQGPNARAKTYAAL--------PGTQAVGEALKPFNAGFATVDGV------ 194
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 195 --GEIMVARTGYTG 206
>gi|313205666|ref|YP_004044843.1| glycine cleavage system t protein [Riemerella anatipestifer DSM
15868]
gi|312444982|gb|ADQ81337.1| glycine cleavage system T protein [Riemerella anatipestifer DSM
15868]
Length = 359
Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 102/310 (32%), Gaps = 53/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A LQ + + +V L A+ S + +G I+ ++ K+E+ +
Sbjct: 49 SHMGQFFIEGAGAKELLQYVTSNNVEALENGKAQYSCLPNGKGGIVDDLIVYKMEDQKYF 108
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS--- 121
+ ++ S D + Y K + + ++ + + D + +
Sbjct: 109 VVVNASNIDKDWQHISKYNEKFGAKMT-NASDEISLIAIQGPKALDTLQKLTDNQLADIP 167
Query: 122 -----------IADVLL--------------------HRTWGHNEKIASD-------IKT 143
+ADV++ + W K + +
Sbjct: 168 YYHFTVGSVDGVADVIISNTGYTGSGGFEIYFKNEYAEQIWDALTKAGEEFGLIPCGLAA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D T P +A + + + ++ ++ +++ + + I RK
Sbjct: 228 RDTLRLEKGFCLYGNDI-DDTTSPLEAGLGWITKLDTE---FVDRDFLAQQKEQGITRKL 283
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258
+P P++ ++ IG + K L +A +D+ + + +
Sbjct: 284 VGFEMQEKAIPRHDYPVVDSEGNIIGKVTSGTMSPMKKIGLGLAYVDQPHFKLGSEIFIQ 343
Query: 259 VHGVRVKASF 268
+ V A
Sbjct: 344 IRNKNVPAKV 353
>gi|262403445|ref|ZP_06080003.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC586]
gi|262349949|gb|EEY99084.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC586]
Length = 376
Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 95/272 (34%), Gaps = 44/272 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L++++ D++ LP R + QG I+ +++ + D
Sbjct: 57 SHMGQLRLYGAQAAAALESLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ + + I L + L ++V +E+ ++ +
Sbjct: 116 VVVNAACKAQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMD 174
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150
+ I R + +K A+ + LR+
Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR
Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGTREGGFPGAEIILSQIETKQVSRKRVG 294
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236
++ T G+ + +IG +
Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAG 326
>gi|226307101|ref|YP_002767061.1| aminomethyltransferase [Rhodococcus erythropolis PR4]
gi|229490394|ref|ZP_04384235.1| glycine cleavage system T protein [Rhodococcus erythropolis SK121]
gi|226186218|dbj|BAH34322.1| aminomethyltransferase [Rhodococcus erythropolis PR4]
gi|229322684|gb|EEN88464.1| glycine cleavage system T protein [Rhodococcus erythropolis SK121]
Length = 366
Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 94/296 (31%), Gaps = 46/296 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + + +D
Sbjct: 54 SHLGKAVVRGAGAAEFVNSALTNDLNKIGPGKAQYTLCCNESGGVIDDLIAYYVSDDEIF 113
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVL--SWNQEHTFSNSSF 115
L + + ++ L+ R+ ++ +Q V + + ++
Sbjct: 114 LVPNAANTADVVAALVALAPDGITVEDQHRAYGVLAVQGPKSVAVLTALGLPTEIEYMAY 173
Query: 116 IDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHELR 148
D ++ V + R+ W +E + A+ + LR
Sbjct: 174 EDAEWNGVPVRVCRSGYTGEVGYELLPRWEDSEPLFRALLEAVRAEGGQAAGLGARDTLR 233
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + I P +A I K + G+E ++ + RK I
Sbjct: 234 TEMGYPLHGHELSLE-ISPLEARCGW--AIGWKKPTFWGKETLTDEKAAGPARKLWGIKA 290
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+ +G +L D IG K +A+A +D + G + V
Sbjct: 291 LDRGVLRAGLGVLRDGEAIGETTSGTFSPSLKVGIALALLDS-GANVSAGDEIEVD 345
>gi|119357809|ref|YP_912453.1| glycine cleavage system aminomethyltransferase T [Chlorobium
phaeobacteroides DSM 266]
gi|166221544|sp|A1BI02|GCST_CHLPD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|119355158|gb|ABL66029.1| glycine cleavage system T protein [Chlorobium phaeobacteroides DSM
266]
Length = 365
Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 76/226 (33%), Gaps = 46/226 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ + FLQ ++T D+ + A+ + +L P G ++ +I +++ TF
Sbjct: 49 SHMGNFYVTGERSEAFLQYMVTNDLSKVRDGEAQYNLMLYPNGGVVDDLIIYRLDSKTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ S + L + V +E +++ +
Sbjct: 109 LIVNASNTEKDYAWLQQHIGAFDGVCLEDHTDRLSLIALQGPVAIDIVKTVFPSVDFDAL 168
Query: 120 ---------FSIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146
+ A V++ RT EK + + +
Sbjct: 169 LQFQFCRTLYGDAPVMIARTGYTGEKGVEICLPNEAALPLWEALYDAGRACGISPVGLGA 228
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
LR+ G + I P +A + + + KG +IG+E
Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDINPLEARLKW--AVKMDKGSFIGRE 271
>gi|299065223|emb|CBJ36389.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Ralstonia solanacearum
CMR15]
Length = 375
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 40/194 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ ++ L A + +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNIDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + + Q I R S +
Sbjct: 111 RLVVNAGTAPT----------------------DLAWIVAQNAAAGTGVTITPRRSDNNA 148
Query: 126 LLHRT-WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + K Y L P T + + P +A ++G+
Sbjct: 149 GAEPLGIVAVQGPNARAKAYAAL--------PGTQAVGEALKPFNAGFATIDGV------ 194
Query: 185 YIGQEVVSRIQHRN 198
G+ +V+R +
Sbjct: 195 --GEIMVARTGYTG 206
>gi|269124490|ref|YP_003297860.1| glycine cleavage T protein (aminomethyl transferase)
[Thermomonospora curvata DSM 43183]
gi|268309448|gb|ACY95822.1| glycine cleavage T protein (aminomethyl transferase)
[Thermomonospora curvata DSM 43183]
Length = 340
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 94/296 (31%), Gaps = 57/296 (19%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+V G AI FL + T ++ L + + + +L G ++ L+ + F++E+
Sbjct: 28 GLFQVQGPGAIRFLNEVTTRNIEFLLEEQSSTALVLDDAGHVISDVLV-HCQGTEFLVEV 86
Query: 70 DRSKRDSLIDKLLFYKLRS------NVIIEIQPINGVVLSWNQEHTFSNS---------- 113
+ ++R + L R+ V + V +F +
Sbjct: 87 EPARRARTWEHL-----RAVAESLDYVELTDVSPARRVFGVEGPASFRIAQHFLSFPVSS 141
Query: 114 ----SFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF-- 160
F R+ ++LL RT E A + ELR + +
Sbjct: 142 LAYRGFTTVRWRDHELLLSRTGVTGEYGYKFHIDAAGAEELRQELRSLGALPVGSAALDI 201
Query: 161 -------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
FP + + + + + G+E ++R R+
Sbjct: 202 CRTEMRFVDLDAEGGRECFPFEVGLQWMVDMHHD---FRGKEALARRIDEGFPRRPVCWT 258
Query: 208 TGTD--DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL 257
+ P G+ + + +G + V L AR+D+ A+ + L
Sbjct: 259 ADPELAAPPAPGTALSIEGQPVGEVTHAVRSPGLGRVIGTARLDETVAAVDVELTL 314
>gi|26991870|ref|NP_747295.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
putida KT2440]
gi|31340121|sp|Q88CI7|GCST_PSEPK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|24986990|gb|AAN70759.1|AE016720_2 glycine cleavage system T protein [Pseudomonas putida KT2440]
Length = 360
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E +
Sbjct: 50 SHMTVIDVDGTDATVWLQRLLANDVARLDDPGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + R ++D L + +V +++P ++ ++ + A
Sbjct: 109 RLVTNAATRAKVLDWLQLQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164
Query: 126 LLHRTWGHNEKIASDIK 142
L R E +A
Sbjct: 165 ALIRELRPFEGVADGDW 181
>gi|160936647|ref|ZP_02084014.1| hypothetical protein CLOBOL_01537 [Clostridium bolteae ATCC
BAA-613]
gi|158440438|gb|EDP18183.1| hypothetical protein CLOBOL_01537 [Clostridium bolteae ATCC
BAA-613]
Length = 375
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 98/303 (32%), Gaps = 60/303 (19%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ L ++T D + AR S + QG ++ ++ K+ +D + + ++ + +D
Sbjct: 74 GPDALKNLNMLLTNDYTVMAEGQARYSPMCNEQGGVVDDLIVYKVRDDCYFIVVNAANKD 133
Query: 76 SLIDKLLFY----KLRSNVIIEIQPIN-------GVVLSWNQEHTFSN---SSFID---- 117
+ + + ++ ++ + V+ +E + D
Sbjct: 134 KDYAWMKAHQSGDVVFDDISSQVAQLALQGPKAMDVLKKVAKEEDIPEKYYTCLFDRMVG 193
Query: 118 -----------------------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
E LL I + LR+ G+
Sbjct: 194 GMKCIISKTGYTGEDGVEIYLAPEDAPKMWELLMEAGKDEGLIPCGLGARDTLRLEAGMP 253
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKRPMIITGTDDL 213
+ TI P +A + + + + K +IG++ + Q + + RKR + +
Sbjct: 254 LYGHEM-DDTISPKEAGLGIF--VKMDKDDFIGKQAI---QDKGPLTRKRVGLKVTGRGI 307
Query: 214 PPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH--GVRVK 265
P+ + ++G A+A+ I G AL V G RV
Sbjct: 308 IREHQPVYIGEQQVGMTTSGTHCPFLGYPAAMALVDI----GFKDPGTALEVDVRGRRVA 363
Query: 266 ASF 268
A
Sbjct: 364 AEV 366
>gi|333024293|ref|ZP_08452357.1| putative glycine cleavage system aminomethyltransferase T
[Streptomyces sp. Tu6071]
gi|332744145|gb|EGJ74586.1| putative glycine cleavage system aminomethyltransferase T
[Streptomyces sp. Tu6071]
Length = 404
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 57/298 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT
Sbjct: 82 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 140
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100
+++ + S +++D L Y L R I ++G+
Sbjct: 141 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 200
Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143
+ + + R A + WG + + +
Sbjct: 201 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 260
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + + + P DA + + + K G ++G+E + +
Sbjct: 261 RDTLRLEAGMPLYGHELSTA-LTPFDAGLGRV--VKFEKTSNEGRFVGREALEAAAEKAA 317
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
RK +I +P +G ++ D +G + K LA+A +D A
Sbjct: 318 STPPRKLVGLIAAGRRVPRAGYAVVADGQVVGEVTSGAPSPTLGKPLAMAYVDAAHAA 375
>gi|328885193|emb|CCA58432.1| Aminomethyltransferase (glycine cleavage system T protein)
[Streptomyces venezuelae ATCC 10712]
Length = 374
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 58/311 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A+ L A++ + T+ AR + I G IL ++ ++ E
Sbjct: 52 LSHMGEITVTGPQAVELLDHALVGN-ISTVGVGRARYTMICQEDGGILDDLIVYRLGETE 110
Query: 65 FILEIDRSKRDSLIDKLLFYK------LR----SNVIIEIQ--------------PINGV 100
+++ + S ++D L +R + +I +Q ++G+
Sbjct: 111 YMVVANASNAQIVLDALTGRAAGFDAEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
T + + R + E I +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFLKPEHAEGVWKALTEAGAPVGLIPCGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + ++ P DA + + + K G ++G+E + + R
Sbjct: 231 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFEKTTNEGRFVGREALEKAAERAE 287
Query: 200 I---RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKV-DHAI 251
RK ++ +P +G ++ D + IG + L A+A +D
Sbjct: 288 TAPPRKLVGLVAEGRRVPRAGFSVVKDGVVIGEVTSGAPSPTLGKPIAMAYVDAAHAEPG 347
Query: 252 KKGMALTVHGV 262
+G+ + + G
Sbjct: 348 TQGVGVDIRGT 358
>gi|237708033|ref|ZP_04538514.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
9_1_42FAA]
gi|237724816|ref|ZP_04555297.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
D4]
gi|229437011|gb|EEO47088.1| glycine cleavage system aminomethyltransferase T [Bacteroides dorei
5_1_36/D4]
gi|229457861|gb|EEO63582.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
9_1_42FAA]
Length = 361
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 60/307 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99
+ ++ KL V + P
Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169
Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146
+ ++ SN+ + + A + + +
Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G D T P +A + + K +I + ++ + + + RK
Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+P G ++ D +IG + K + + + A+ + + V G
Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347
Query: 262 VRVKASF 268
++KA
Sbjct: 348 RKLKAVI 354
>gi|168029405|ref|XP_001767216.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681471|gb|EDQ67897.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 412
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 86/278 (30%), Gaps = 50/278 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G AI FL+ ++ AD+ L S G ++ +I+K+
Sbjct: 83 SLFDVSHMCGLSLKGPDAIDFLETLVVADIKGLANGTGTLSVFTNENGGVIDDTVITKVT 142
Query: 62 EDTFILEIDRSKRDSLIDKLLFY----------------------------------KLR 87
+D L ++ RD + L Y KL
Sbjct: 143 DDHIYLVVNAGCRDKDLAHLEKYLKPFLASGKSVGWHIHDERSLLALQGPLAGEVLQKLT 202
Query: 88 ----SNVIIEIQPINGVVLS--------WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
S + I + S + E F S + + ++ + G
Sbjct: 203 KEDLSKMYFSDFKIIDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMDKAPGKLR 262
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRI 194
+ LR+ G+ D I P +A + G +G ++G E + R
Sbjct: 263 LTG--LGARDSLRLEAGLCLYGNDLE-QHISPIEAGLAWTVGKRRRAEGNFLGAEPILRQ 319
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ R+R I+ + + IG +
Sbjct: 320 IKDGVSRRRVGFISTGAPARAHSEILDLEGKNIGEITS 357
>gi|217967897|ref|YP_002353403.1| glycine cleavage system T protein [Dictyoglomus turgidum DSM 6724]
gi|217336996|gb|ACK42789.1| glycine cleavage system T protein [Dictyoglomus turgidum DSM 6724]
Length = 356
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 44/262 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ F+Q + T DV L A+ S IL G I ++ +I E+ F+
Sbjct: 50 SHMGRILLKGQKVKNFVQYVTTNDVNNLYPGKAQYSLILNYDGTIKDDIIVYEISEEEFL 109
Query: 67 LEIDRSKRDSLIDKL---LFYKL------------------RSNVIIEIQPINGVVLSWN 105
L ++ ++D L +++ V ++ + LS
Sbjct: 110 LVVNAINTQKILDWLNLNNKFEVNILDLTNTTTLLAIQGPDSEKV---LEEYFNLNLSNI 166
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE--------------KIASDIKTYHELRINH 151
+ + F + I R E + + LRI
Sbjct: 167 KYYHFKKNHMIISRTGYTGEDGFEIVSDPEIGRKIFRDLVEKKKATPCGLGARNTLRIEM 226
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITGT 210
G + +T P +A + + + L KG +IG++ +V R + I K +++
Sbjct: 227 GYALYGHEIDENTT-PWEANLGWV--VKLNKGDFIGKDSLVERKTKKEKILKGFVML--E 281
Query: 211 DDLPPSGSPILTDDIEIGTLGV 232
+ +P G + D IG +
Sbjct: 282 NGIPRDGYEVYLDKERIGYITS 303
>gi|318059464|ref|ZP_07978187.1| glycine cleavage system aminomethyltransferase T [Streptomyces sp.
SA3_actG]
gi|318077288|ref|ZP_07984620.1| glycine cleavage system aminomethyltransferase T [Streptomyces sp.
SA3_actF]
Length = 379
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 57/298 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A+ L A++ + ++ AR + I G IL ++ + DT
Sbjct: 57 LSHMGEITVAGPQAVDLLDFALVGN-IGSVNEGRARYTMICREDGGILDDLIVYRTGADT 115
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKL---------RSNVIIEIQPINGV 100
+++ + S +++D L Y L R I ++G+
Sbjct: 116 YLVVANASNAQTVLDALRERAAGFDAEVRDDRDAYALLAVQGPAAARILAKITDADLDGL 175
Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143
+ + + R A + WG + + +
Sbjct: 176 KYYAGLPGSAGGVAVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGSGMVPCGLAC 235
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + + + P DA + + + K G ++G+E + +
Sbjct: 236 RDTLRLEAGMPLYGHELSTA-LTPFDAGLGRV--VKFEKTSSEGRFVGREALEAAAEKAA 292
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
RK +I +P +G ++ D +G + K LA+A +D A
Sbjct: 293 STPPRKLVGLIAAGRRVPRAGYAVVADGQVVGEVTSGAPSPTLGKPLAMAYVDAAHAA 350
>gi|193212088|ref|YP_001998041.1| glycine cleavage system aminomethyltransferase T [Chlorobaculum
parvum NCIB 8327]
gi|238692611|sp|B3QLF1|GCST_CHLP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|193085565|gb|ACF10841.1| glycine cleavage system T protein [Chlorobaculum parvum NCIB 8327]
Length = 365
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ A+ FLQ + T D+ + A+ + +L P G I+ +I ++ DTF
Sbjct: 49 SHMGNFYVRGERALEFLQYVTTNDLGKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTF--------------- 110
L ++ S + L + V +E + +++ F
Sbjct: 109 LIVNASNCEKDFAWLSDHVGGFEGVTLENRTSELSLIALQGPKAFEVLGRVFPEAGLDKL 168
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEK-------IASDIKTY------------------- 144
++ F F A+ ++ RT E +
Sbjct: 169 ASFHFATVPFGGAEAMVARTGYTGEAGVEICLPNEEAEALWTALMAAGKNDGIQPIGLGA 228
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + T+ P +A + + + + K +IG++ + Q RK
Sbjct: 229 RDTLRLEMGYSLYGHEI-DQTVNPLEARLKWV--VKMDKPNFIGKQ--ACQQVELDPRKS 283
Query: 204 PMIITGTD-DLPPSGSPILTDDI-EIGTLGV 232
+ + +P + D EIG +
Sbjct: 284 VVGFSLDGRAIPRQHFKVYNSDKQEIGEVCS 314
>gi|289664259|ref|ZP_06485840.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 369
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLDPADTAAAS 169
Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
D+ L RT E + + ++
Sbjct: 170 KLGRFSALQTHSRDGIDLFLARTGYTGEDGFEIVLPQDAAVAFWNALLTQGVKPAGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DDAVTPYEAALAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287
Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +L + + EI GT +G KA+A AR+ + + +
Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345
Query: 261 GVRVKASF 268
V ++A
Sbjct: 346 QVPLRAVK 353
>gi|159469919|ref|XP_001693107.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii]
gi|158277365|gb|EDP03133.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii]
Length = 409
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 88/297 (29%), Gaps = 52/297 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK AI FL+ ++ D+ L SA +G I+ +I+K+ ++
Sbjct: 87 SLKGKDAIQFLEGLVVGDIAGLKDGTGSLSAFTNEKGGIIDDTVITKVNGQHIYTVVNAG 146
Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
RD + L + + V + + ++ + +
Sbjct: 147 CRDKDLAHLSKHLAAAKSKGLDVAMTVHDDRSLLALQGPAAAEVVAGLVAPGVDLKAMYF 206
Query: 119 -RFSIADVLLHRTW------------------GHNEKIASDIKT-----------YHELR 148
F D+ W H +A + LR
Sbjct: 207 SDFKPIDLGGIPCWVTRTGYTGEDGFEISVPNSHAVALAEKLTANKRVRMAGLGPRDSLR 266
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D + P +A + G K ++G +++ + + ++R +
Sbjct: 267 LEAGLCLYGNDL-NEDLTPVEAGLAWTIGKRRREKFDFLGGDIIKKQLAEGVSKRRVGFV 325
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260
+ D +G + L A+ +DK K G AL V
Sbjct: 326 STGAPARQHSVVSTPDGKVVGEITSGAFSPCLKKNIAMGYVDK--DFAKAGTALKVE 380
>gi|289667421|ref|ZP_06488496.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 369
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLDPADTAAAS 169
Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
D+ L RT E + + ++
Sbjct: 170 KLGRFSARQTHSRDGIDLFLARTGYTGEDGFEIVLPQDAAVAFWNALLTQGVKPAGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DDAVTPYEAALAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287
Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +L + + EI GT +G KA+A AR+ + + +
Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLQVDIRGK 345
Query: 261 GVRVKASF 268
V ++A
Sbjct: 346 QVPLRAVK 353
>gi|144898463|emb|CAM75327.1| Glycine cleavage T protein (aminomethyl transferase)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 370
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 83/263 (31%), Gaps = 38/263 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G + L++++ D+ L R S QG IL +ISK+ ED
Sbjct: 56 SHMGQITIEGDNVATLLESLVPGDIQGLGLGRTRYSVFTNDQGGILDDLMISKLAEDKLF 115
Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + +D+ L +L ++ +Q + F+
Sbjct: 116 LVVNAACKDADFAHLSRALSGKAKLSQLDDRALLALQGPQAATVMARLAPGAETQGFMSI 175
Query: 119 R-FSIADV--------------------------LLHRTWGHNEKIASDIKTYHELRINH 151
R + IAD+ L E + LR+
Sbjct: 176 REYPIADIPCLVTRSGYTGEDGYEISVANVDAEKLARTLLAQPEVKPIGLGARDSLRLEA 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ +D T P + + + G +G + G ++ + R R I
Sbjct: 236 GLCLYGSDIDT-TTTPVEGRIAWIIGKRRREQGGFPGAAIIQKQLTEGAPRLRVGIKPVG 294
Query: 211 DDLPPSGSPILT-DDIEIGTLGV 232
+ + I D +G +
Sbjct: 295 RAPARAHTEITDVDGTPLGEITS 317
>gi|285018969|ref|YP_003376680.1| glycine cleavage systemT protein, aminomethyltransferase
[Xanthomonas albilineans GPE PC73]
gi|283474187|emb|CBA16688.1| putative glycine cleavage system t protein, aminomethyltransferase
[Xanthomonas albilineans]
Length = 368
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ V L A + +L PQG ++ ++ + + F
Sbjct: 50 SHMTVVDLHGEQVRAFLRHLLANSVDKLKVPGKALYTCMLNPQGGVIDDLIVYYMSDAFF 109
Query: 66 ILEIDR-----------SKRDSL------IDKLLFYKL-----RSNVI------------ 91
L ++ ++ + D + R+ VI
Sbjct: 110 RLVVNAATRVNDLAWIGAQAQAFGVQVRERDDFAMVAVQGPNARAKVIGLLREGDRAAAE 169
Query: 92 -------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+E+ GV L + F + +
Sbjct: 170 KLTRFAAVEVVSREGVPLFVARTGYTGEDGFEIVLPQQQAPAFWAALLSAGVAPAGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + ++G+EV+ + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DERVSPYEAGLAWTVALDEGRA-FVGREVLEAQKAGGAPRQMI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT E GT +G KA+A AR+ + +
Sbjct: 288 GVVMDEKGVLRHGQKVLTAQGEGEILSGTFSPTLG-KAIAFARV-PAGEPGAVRVDIRGK 345
Query: 261 GVRVKASF 268
GV V+
Sbjct: 346 GVPVRVVK 353
>gi|94500326|ref|ZP_01306859.1| glycine cleavage system aminomethyltransferase T [Oceanobacter sp.
RED65]
gi|94427625|gb|EAT12602.1| glycine cleavage system aminomethyltransferase T [Oceanobacter sp.
RED65]
Length = 365
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEE-DT 64
S+ + + + G A +LQ ++ DV L A + +L QG ++ ++ K E
Sbjct: 50 SHMTVVDITGSDATAYLQYLLANDVAKLKTEGKALYTGMLNEQGGVIDDLIVYKAEHLGG 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+ L ++ + R+ + + + + NV + QP ++
Sbjct: 110 YRLVVNCATREKDLAWMEKHSHKFNVALSEQPELAMIAVQGPNAI 154
>gi|313125609|ref|YP_004035873.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
gi|312291974|gb|ADQ66434.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
Length = 368
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 55/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63
S+ I+V G A +Q + T DV L ++ + I +G IL ++ ++ + D
Sbjct: 51 SHMGEIEVSGPDATRLMQRLTTNDVTLLDPGDSQYAMITDAEGTILDDTVVYRLPDEETD 110
Query: 64 TFILEIDRSKRDSLIDKLL--------------------FYKLR---------------- 87
++ + + + D+ + ++
Sbjct: 111 RYLFIPNAGHDEEMHDRWTSHRDEWELDARIANTTEEWAMFAVQGPDAKDAVVAAADGDV 170
Query: 88 ---SNVIIEIQPINGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKT 143
S + + GV + F I A+ + + +E +
Sbjct: 171 GSLSKFEATYEDVVGVRSWVARTGYTGEDGFEILCPVEEAETVWNAFVEDHESQPCGLGA 230
Query: 144 YHELRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G + DF P + P++A + + ++G++ + I +
Sbjct: 231 RDTLRMEMGFLLSGEDFDPESEPRNPYEAGVGFTVKLDTE---FVGRDALEGIDEEGVEE 287
Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254
K + +P G I+ D+ +G + AL ++ D
Sbjct: 288 KFVGLKLLDRGVPRHGYDIVDADNHVVGHVTSGTMSPTLGEPIALGYVPVEHADPGTTLS 347
Query: 255 MALTVHGVRVKA 266
+ + R K
Sbjct: 348 VVVRGQEKRAKV 359
>gi|300864394|ref|ZP_07109266.1| glycine cleavage system aminomethyltransferase T [Oscillatoria sp.
PCC 6506]
gi|300337620|emb|CBN54412.1| glycine cleavage system aminomethyltransferase T [Oscillatoria sp.
PCC 6506]
Length = 390
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 100/286 (34%), Gaps = 49/286 (17%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILEIDRSKRD 75
LQ ++ +D+ L A+ + +L +G IL + + D ++ ++
Sbjct: 89 LQTLVPSDLGRLQPGQAQYTVLLNAKGCILDDIIFYYQDPDPTTGEQRGVMIVNAATRAR 148
Query: 76 S---LIDKLLFYKL------RSNVIIEIQP--------------INGVVLSWNQEHTFSN 112
+ L + + V+I +Q + V + E T
Sbjct: 149 DKAWIGAHLELSGISFIDISKEKVLIAVQGPQATAHLQQFVKENLAAVKFFGHLEATVLG 208
Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
R +IA L R + + LR+ + + D
Sbjct: 209 EPAFIARTGYTGEDGFEVMLDAIAGKELWRNLLAAGVVPCGLGARDTLRLEAAMCLYSQD 268
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
T P +A + + + +KG +IG++V+ + + + ++ + + G P
Sbjct: 269 I-DDTTTPLEAGLGWVVHLD-SKGYFIGRKVLEQQKATGVAKRLVGLEMEGRHIARHGYP 326
Query: 220 ILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+L++ + +G + KA+A+A + AI + + + + G
Sbjct: 327 VLSEGVVVGEITSGTLSPTLNKAIALAYVPTPLAAIGQQLEVEIRG 372
>gi|149913935|ref|ZP_01902467.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
AzwK-3b]
gi|149812219|gb|EDM72050.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
AzwK-3b]
Length = 1003
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 95/324 (29%), Gaps = 67/324 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + L R + G ++ +++++++DTF+
Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTNMMSNLKPGRCRYGLMCNENGFLMDDGVVARLDDDTFL 729
Query: 67 LEIDRSKRDSLIDKL-----------LFY-------------------KLRSNVIIEIQP 96
DS+ + Y K+ + +
Sbjct: 730 CHTTTGGADSIHAHMEEWLQTEWWDWKVYTANVTEQYAQIAVVGPKARKVLEKLTDDDIS 789
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI----- 141
+ + ++ T R S + L W +
Sbjct: 790 ADALSFMGWKDITLHGIKARAYRISFSGELSYEVAVPASQGRALWDALLAEGKEFGVTPY 849
Query: 142 --KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ H +R G + + T+ P D +D IS K Y+G+ R +
Sbjct: 850 GTEALHIMRAEKGFIMIGDE-TDGTVIPQDLGLDW--AISKKKEDYLGKRAQERSHMTDP 906
Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247
R + + + T P G+ D V G + +A+ + +
Sbjct: 907 TRWKLVGLQTLDGSTLPDGAYATADGTNANGQRNVQGRVTSSYHSPTLGRGIAMGVV--L 964
Query: 248 DHAIKKGMAL---TVHGVRVKASF 268
+ + G L V G +KA
Sbjct: 965 NGPARMGDVLDFPKVDGTVIKAKI 988
>gi|60280045|gb|AAX16385.1| aminomethyltransferase [uncultured murine large bowel bacterium BAC
31B]
Length = 362
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 97/305 (31%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + +V L + + G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D++ ++ I+ +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSINLSDLPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K + LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKVWDAVFEAGAEFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + ++ + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + TD IG + + R + + + + ++
Sbjct: 294 IPRHGYELYGTDGAAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|310822290|ref|YP_003954648.1| aminomethyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|309395362|gb|ADO72821.1| Aminomethyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 363
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 105/315 (33%), Gaps = 51/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+ G A+ +I+ D++ A + +LT QG + + + +
Sbjct: 50 SHMGEIEFTGPGALETANRLISNDLVRCKDGQAVYAGLLTEQGTFVDDVVAYRFSPERIF 109
Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++ S R+ + + RS+ I +Q L T + + +D
Sbjct: 110 ICVNSSNREKDFAWMREHAQGVKPVDRSSDFAQIAVQGPKAEALVQRLTKTDVSKAQVDT 169
Query: 119 -RFSIADV-----LLHRTWGHNEK-----IASD--IKTYHELRINHGIVDPN-------- 157
RF+ +V ++ RT E ASD ++ L + G D
Sbjct: 170 YRFTEGEVAGVKCIISRTGYTGEDGFELYCASDRAEALWNAL-LQEGQADGVMACGLGAR 228
Query: 158 ----TDF--------LPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
T+ + +A + + + L K G +IG++ + + + + RK
Sbjct: 229 DSLRTEMKYALYGNDIDEAHTALEAGLGWI--VKLDKPGGFIGKQALEKQKAEGVQRKLV 286
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258
+ +P G PIL D +G + V + + +
Sbjct: 287 GFVLTGSGIPRHGYPILKDGQRVGEVTSGTMGPSVKKPIGMGYVPAALASEGATFDVEIR 346
Query: 259 VHGVRVKASFPHWYK 273
V + ++K
Sbjct: 347 GRAVAAQVVKTPFWK 361
>gi|315022602|gb|EFT35628.1| glycine cleavage system aminomethyltransferase T [Riemerella
anatipestifer RA-YM]
gi|325336892|gb|ADZ13166.1| Glycine cleavage system T protein (aminomethyltransferase)
[Riemerella anatipestifer RA-GD]
Length = 359
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 53/288 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A LQ + + +V L A+ S + +G I+ ++ K+E+ +
Sbjct: 49 SHMGQFFIEGAGAKELLQYVTSNNVEALENGKAQYSCLPNGKGGIVDDLIVYKMEDQKYF 108
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS--- 121
+ ++ S D + Y K + + ++ + + D + +
Sbjct: 109 VVVNASNIDKDWQHISKYNEKFGAKMT-NASDEISLIAIQGPKALDTLQKLTDNQLADIP 167
Query: 122 -----------IADVLL--------------------HRTWGHNEKIASD-------IKT 143
+ADV++ + W K + +
Sbjct: 168 YYHFTVGSVDGVADVIISNTGYTGSGGFEIYFKNEYAEQIWDALTKAGEEFGLIPCGLAA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D T P +A + + + ++ ++ +++ + + I RK
Sbjct: 228 RDTLRLEKGFCLYGNDI-DDTTSPLEAGLGWITKLDTE---FVDRDFLAQQKEQGITRKL 283
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDK 246
+P P++ ++ IG + K L +A +D+
Sbjct: 284 VGFEMQEKAIPRHDYPVVDSEGNIIGKVTSGTMSPMKKIGLGLAYVDQ 331
>gi|284172805|ref|YP_003406187.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena
turkmenica DSM 5511]
gi|284017565|gb|ADB63514.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena
turkmenica DSM 5511]
Length = 857
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 50/267 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
++V G A F+Q + T D+ L R + + +G + +++++++ ++L
Sbjct: 550 MEVVGSDAGDFVQRLCTNDMD-LDIGDVRYTLMCNEEGGVRADITVTRVDDNRYLLLTTG 608
Query: 68 ----------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105
++ S + K+ S V +
Sbjct: 609 REVGNNHVAWVREQSPEDVVVNDVTSSLAAMVCTGPNARKVLSEVTDVDLSDEAFPFFTS 668
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYH----------ELR 148
Q+ N R S A L + + E + + Y LR
Sbjct: 669 QQFFIKNVPVTALRVSYAGELGWELYTPSEYGEQLWEHLMEAGEEYDIRPYGNGALNALR 728
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G D P++ + + L +IG+E V N I + +T
Sbjct: 729 IEKGFRLWGEDLHTEH-NPYETDLGW--AVDLETD-FIGKEAVVEAAEGNNIDHKVACLT 784
Query: 209 GTDDLPP--SGSPILTDDIEIGTLGVV 233
D+ PI D IG +
Sbjct: 785 LDDEEATILPHRPIFDGDEPIGYVHSA 811
>gi|85711153|ref|ZP_01042213.1| aminomethyltransferase [Idiomarina baltica OS145]
gi|85695066|gb|EAQ33004.1| aminomethyltransferase [Idiomarina baltica OS145]
Length = 359
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 99/279 (35%), Gaps = 44/279 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A FL+ ++ DV L A+ +++L QG ++ ++ + ++
Sbjct: 50 SHMTIVDVAGQQAQAFLRYLLVNDVAKLKTEGKAQYTSMLNEQGGVIDDLIVYHFSDTSY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSIAD 124
L ++ + R+ + + +V I + ++ E ++ + E F+ +
Sbjct: 110 RLVVNSATRERDLGWIEKVAADFDVTINERDDMAMIAVQGPESEAKLNAVLSSEDFATIE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + + + LR+
Sbjct: 170 GMKPFLGKQVGDLFIATTGYTGEKGYEIIVPAEQVNDLWKQLIAADVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P ++ M T +IG++ + + + K ++
Sbjct: 230 EAGMNLYGQDM-DESVTPLESNMGWSVAFEPTDRDFIGRQALEQQKQAGH-HKLVGLVME 287
Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244
+ G ++ D E GT +G ++A+AR+
Sbjct: 288 DKGVLRHGLKVIVDGGEGVITSGTFSPSLG-FSIAMARV 325
>gi|46115144|ref|XP_383590.1| hypothetical protein FG03414.1 [Gibberella zeae PH-1]
Length = 833
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 80/272 (29%), Gaps = 54/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A LQ + T +V + +L G I ++++ ED F L ++
Sbjct: 505 LEIAGPGAAELLQRLTTGNVAG-EVGKVTFTLLLDNHGGIRSDIFVARLGEDLFHLGVNG 563
Query: 72 SK------------------------------------------------RDSLIDKLLF 83
+D+ D+
Sbjct: 564 PVDLHYFTREAKVQTKASPHRAVHVRDITGGLASVGVWGPLAKDLMKLVSKDNFTDRAFP 623
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
Y + + P S+ E F + D + D L + IA+
Sbjct: 624 YLTTKKIEVSGIPAIATHFSYIGEEGFEIYTTADNGLRLWDAL-WQGGLPYGVIAAGRSA 682
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRK 202
++ LRI G +D P++A ++ + K Y+G + R + R
Sbjct: 683 FNALRIEKGFRSWGSDMT-QEYDPYEAGLEF--ALHPGKDGYVGYNALKGRSSEKVSRRI 739
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + + P+ +G +
Sbjct: 740 RGLTVDDGKSVVLGKEPVFVKGRAVGYVTSAA 771
>gi|115379404|ref|ZP_01466507.1| glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1]
gi|115363591|gb|EAU62723.1| glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1]
Length = 363
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 51/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+ G A+ +I+ D++ A + +LT QG + + + +
Sbjct: 50 SHMGEIEFTGPGALETANRLISNDLVRCKDGQAVYAGLLTEQGTFVDDVVAYRFSPERIF 109
Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++ S R+ + + RS+ I +Q L T + + +D
Sbjct: 110 ICVNSSNREKDFAWMREHAQGVKPVDRSSDFAQIAVQGPKAEALVQRLTKTDVSKAQVDT 169
Query: 119 -RFSIADVLLHRTWGHNEKIASD------------IKTYHELRINHGIVDPN-------- 157
RF+ +V + + ++ L + G D
Sbjct: 170 YRFTEGEVAGVKCIISRTGYTGEDGFELYCAXDRAEALWNAL-LQEGQADGVMACGLGAR 228
Query: 158 ----TDF--------LPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
T+ + +A + + + L K G +IG++ + + + + RK
Sbjct: 229 DSLRTEMKYALYGNDIDEAHTALEAGLGWI--VKLDKPGGFIGKQALEKQKAEGVQRKLV 286
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258
+ +P G PIL D +G + V + + +
Sbjct: 287 GFVLTGSGIPRHGYPILKDGQRVGEVTSGTMGPSVKKPIGMGYVPAALASEGATFDVEIR 346
Query: 259 VHGVRVKASFPHWYK 273
V + ++K
Sbjct: 347 GRAVAAQVVKTPFWK 361
>gi|227356373|ref|ZP_03840761.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
gi|227163483|gb|EEI48404.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
Length = 364
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ +E +
Sbjct: 50 SHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + R+ + + + V I+++ ++ + E
Sbjct: 110 RLVVNSATREKDLAWITEHAKDYVVDIQVRDDLALIAVQGPHAQEKVQRLLSESHRQIVA 169
Query: 121 ---------------SIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + + LR+
Sbjct: 170 AMKPFYGVQLDDLFVATTGYTGEAGYEIAMPKEQAVDYWQKLLAVGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + TI P +A M +IG+E + +++ + +++
Sbjct: 230 EAGMDLYGQEM-DETINPLEANMGWTIAWLPEDRQFIGREALEKLRATGTDKLVGLVMRE 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
L + TDD +G L V +A+AR+ + L
Sbjct: 289 KGVLRAGSAVHFTDD--LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLLRNR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EIPVEVVKP 354
>gi|197285872|ref|YP_002151744.1| glycine cleavage system aminomethyltransferase T [Proteus mirabilis
HI4320]
gi|238693209|sp|B4F0N9|GCST_PROMH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|194683359|emb|CAR44066.1| aminomethyltransferase (glycine cleavage system T protein) [Proteus
mirabilis HI4320]
Length = 364
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ +E +
Sbjct: 50 SHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + R+ + + + V I+++ ++ + E
Sbjct: 110 RLVVNSATREKDLAWITEHAKDYVVDIQVRDDLALIAVQGPHAQEKVQRLLSESHRQIVA 169
Query: 121 ---------------SIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + + LR+
Sbjct: 170 AMKPFYGVQLDDLFVATTGYTGEAGYEIAMPKEQAVDYWKKLLAVGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + TI P +A M +IG+E + +++ + +++
Sbjct: 230 EAGMDLYGQEM-DETINPLEANMGWTIAWLPEDRQFIGREALEKLRATGTDKLVGLVMRE 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
L + TDD +G L V +A+AR+ + L
Sbjct: 289 KGVLRAGSAVHFTDD--LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLLRNR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EIPVEVVKP 354
>gi|225011960|ref|ZP_03702398.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-2A]
gi|225004463|gb|EEG42435.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-2A]
Length = 361
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 53/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A LQ I + D+ + A+ + +G I+ ++ +++E ++
Sbjct: 49 SHMGEFLVSGAKAFDLLQYICSNDISKINIGKAQYNYFPNEKGGIVDDLIVYRLKETEYL 108
Query: 67 LEIDRSKRDS----LIDKLL--------------------------FYKLRSNVIIEIQP 96
L ++ S D + KL S + E+
Sbjct: 109 LVVNASNIDKDWNWVEKHNSNFGALLENKSEETALLAIQGPKAIEAMQKLTSIPLAELPY 168
Query: 97 INGVVLSWNQ-EHTFSNSS-----------FIDERFSIADVLLHRTWGHNEKIASDIKTY 144
++ E+T ++ F + + + E + +
Sbjct: 169 YAHTTATFAGCENTLIATTGYTGAGGIEIYFPTNKAPEIWASIMKAGADYEITPAGLAAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G + +T P A + + G + E+++ + + K
Sbjct: 229 DTLRIEMGYCLYGNEINDNTS-PLAAGLGWV--TKFETGTF-NSEILALQKKEGLSEKLV 284
Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMAL 257
+ T +P SG I+ + IGT+ L +++ + + +
Sbjct: 285 GFLLETRGIPRSGYEIVNREGKIIGTVTSGTQSPILSQGIGLGYVKLEYSKPGSEIAIRI 344
Query: 258 TVHGVRVKASF 268
Sbjct: 345 RDKDCPAIIIK 355
>gi|304384132|ref|ZP_07366585.1| glycine cleavage system T protein [Prevotella marshii DSM 16973]
gi|304334759|gb|EFM01036.1| glycine cleavage system T protein [Prevotella marshii DSM 16973]
Length = 363
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 102/295 (34%), Gaps = 45/295 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + GK A ++ I T DV +L P G + L+ K+ E F
Sbjct: 51 SHMGEVFITGKDAQKYVNHIFTNDVTPDEPNKVYYGMMLYPDGGTVDDLLVYKMSETKFF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEH-------------TFSN 112
L I+ + D +D + +++I+ G + E
Sbjct: 111 LVINAANIDKDVDWMKQNATGFDIVIDHCSDRYGQLAIQGPEAEAVVEEVLGLPCKDLVF 170
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-------DIKTYHE-----------------LR 148
+F + + +++L RT E I+ + + LR
Sbjct: 171 YTFKEMNIAGEEIILSRTGYTGEDGFEIYCSHKLTIEYWDKLMASKRCLPCGLGCRDTLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + + I P + + + L K +IG + + + + + ++ I
Sbjct: 231 FEVGLPLYGDEL-SAEISPVMSGLSMFC--KLEKEEFIGMDAIRKQKEEGVKQRVIGIEL 287
Query: 209 GTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTV 259
+ +P G I+ D IG + + K++ +A +DK + + + +
Sbjct: 288 KDNAIPRHGYEIIKDGKVIGEVTTGYHTISTDKSVCMALVDKEHSKLGTEVEVKI 342
>gi|330448086|ref|ZP_08311734.1| glycine cleavage system T protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492277|dbj|GAA06231.1| glycine cleavage system T protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 372
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 91/268 (33%), Gaps = 44/268 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL++++ D++ LP R + +G I +++ D
Sbjct: 54 SHMGQLRLKGDKAAAFLESLVPVDIIDLPVGKQRYALFTNDKGGIEDDLMVTNFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + ++ I L + ++ +Q + ++ F+D
Sbjct: 113 LVVNAACKEQDIAHLKANLADGVELEVIEDRALLALQGPKAAAVLAELNPAVADMVFMDA 172
Query: 119 RF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
A+ + N+ + LR+
Sbjct: 173 AHIELMGVECYISRSGYTGEDGYEISVPSDKAEAFARQLLAFNDVEWIGLGARDSLRLEC 232
Query: 152 GIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVS-RIQHRNIIRKRPM 205
G+ D P T P +A + +G + G E++ +I ++ +RKR
Sbjct: 233 GLCLYGHDLDP-TTTPFEASLLWAITPVRRAGGDREGGFPGAEIILDQITNKQALRKRIG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ + G+ + DD EIG +
Sbjct: 292 LVGQSKAPVREGTKLFDADDNEIGIVTS 319
>gi|224538612|ref|ZP_03679151.1| hypothetical protein BACCELL_03506 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519746|gb|EEF88851.1| hypothetical protein BACCELL_03506 [Bacteroides cellulosilyticus
DSM 14838]
Length = 361
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 102/305 (33%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKVQYTCFPNEEGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D + ++ I+ +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K ++ LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGEEFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K +I + ++ + + +RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FINRPMLEKQKTEGTVRKLVGFEMVDRG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + T+ IG + + + + + + + ++
Sbjct: 294 IPRHGYELFNTEGEAIGVVTSGTMSPTRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVRPP 358
>gi|319901533|ref|YP_004161261.1| aminomethyltransferase [Bacteroides helcogenes P 36-108]
gi|319416564|gb|ADV43675.1| aminomethyltransferase [Bacteroides helcogenes P 36-108]
Length = 363
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPHALNFLQKVTSNNVAVLTPGKVQYTCFPNEKGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D++ ++ I+ +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K + LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + ++ + + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVDGKN-FTNRVMLEKQKTEGVSRKLVGFEMIDRG 293
Query: 213 LPPSGSPI-LTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + + +G + + + + + + ++V+
Sbjct: 294 IPRHGYELCNAEGEPVGMVTSGTMSPTRKIGIGMGYVKPAYSKAGTEIYIDMRGRKLKVQ 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|86157671|ref|YP_464456.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774182|gb|ABC81019.1| glycine cleavage system T protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 360
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 46/303 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ L + T D+ + A+ + G I+ ++ + + +
Sbjct: 50 SHMGEVVFRGPRALAALGRVFTNDLSKVADGQAQYGCLCRDSGGIVDDVVVYRRGAEDLL 109
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDER 119
+ ++ R + L + ++V E + L T + S+ R
Sbjct: 110 VCVNAGNRQKDFEWLAGHAAGADVRNESDDWAQLALQGPLAAQLLQRLTTVNLSAMRSYR 169
Query: 120 FSIADVLLHR-TWGHNEKIASD-----------IKTYHELRINHGIVDPNTDFL------ 161
F +V R D + + L + G +
Sbjct: 170 FGEGEVAGVRCMVARTGYTGEDGFELFCRADLGPRLWDAL-MEAGAPEGIAPCGLGARDS 228
Query: 162 --------------PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
T P +A + + + L KG +IG++ + + + + + RK
Sbjct: 229 LRLEMAYRLYGSDMDETTTPLEAGLAWV--VKLDKGEFIGRDALLKQKEQGLSRKLVGFQ 286
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G P+L D ++G + A+ +A + A A+ + G
Sbjct: 287 LTDAGIPRHGYPVLQDGRKVGEVTSGTKSPSLGTAIGLAYVPPALAAEGSTFAVEIRGRA 346
Query: 264 VKA 266
A
Sbjct: 347 AAA 349
>gi|55980492|ref|YP_143789.1| glycine cleavage system aminomethyltransferase T [Thermus
thermophilus HB8]
gi|61213274|sp|Q5SKX0|GCST_THET8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|55771905|dbj|BAD70346.1| glycine cleavage system T protein (probable aminomethyltransferase)
[Thermus thermophilus HB8]
Length = 349
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 52/303 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ FLQ D L A+ S + +G ++ + ++ E+ ++
Sbjct: 49 SHMGEFLVRGKEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------N 112
+ ++ + + L V +E +L+ S
Sbjct: 109 MVVNAANIAKDLAHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRK 168
Query: 113 SSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELRI 149
+ R + L RT + + LR+
Sbjct: 169 NDVFPARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALVEAGAKPAGLGARDSLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + P + + ++G+E + R+R + +
Sbjct: 229 EAGFPLYGHELT-EETNPLCTPWAW---VVKKEKAFLGKEAML----AQACRERLVGLVL 280
Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G +L+ +G + + ++ +A+A V+ + + V G V
Sbjct: 281 EGGIPREGYRVLSGGRPVGRVTSGGYSPLLQRGIALA---YVEEGAEGPFQVEVRGRAVP 337
Query: 266 ASF 268
A+
Sbjct: 338 AAL 340
>gi|294667450|ref|ZP_06732667.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292602783|gb|EFF46217.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 369
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 63/173 (36%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMAEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + R +V +E + + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDSAMIAVQGPSARTKVIDLLDPADTAAAS 169
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R + I+ + G + + P A + N +
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQQAAVAFWNAL 216
>gi|325925770|ref|ZP_08187143.1| aminomethyltransferase [Xanthomonas perforans 91-118]
gi|325543827|gb|EGD15237.1| aminomethyltransferase [Xanthomonas perforans 91-118]
Length = 369
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169
Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
D+ L RT E + + ++
Sbjct: 170 KLGRFAALQTRSRDGIDLFLARTGYTGEDGFEIVLPQEAAVAFWNALLAQGVKPAGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + R+
Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLEYQKAQGAPRQLI 287
Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +L + + EI GT +G KA+A AR+ + + +
Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345
Query: 261 GVRVKASF 268
V ++A
Sbjct: 346 QVPLRAVK 353
>gi|227872936|ref|ZP_03991238.1| aminomethyltransferase [Oribacterium sinus F0268]
gi|227841222|gb|EEJ51550.1| aminomethyltransferase [Oribacterium sinus F0268]
Length = 380
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 54/300 (18%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
GK A+ LQ I+T + + AR S + G ++ ++ K ++ + + ++ + R+
Sbjct: 78 GKDALANLQKILTNNFENMVDGQARYSLMCNENGGVVDDLIVYKKGDNDYFIVVNAANRE 137
Query: 76 SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------------------- 108
+ ++ +K +V + ++
Sbjct: 138 KDFNWMVQHK-FGDVEFTNVSDDYAQIALQGPKAMDIIRRLTSEENIPQKYYHAVFNATV 196
Query: 109 ------------TFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYHELRINHGI 153
T + + S A+ + + ++ I + LR+ +
Sbjct: 197 DGIPCIVSKTGYTGEDGVELYLDSSKAEEMWDKLLAAGKEEGLIPCGLGARDTLRMEAAM 256
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIITGTDD 212
+ I P + + + + K +IG+ + I+ + + KR +
Sbjct: 257 PLYGHEM-DDEITPLETGLKF--AVKMDKPDFIGK---AAIEAKGEPKIKRVGLKVTGRG 310
Query: 213 LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ +L D IG + +A ID + + + V G +V
Sbjct: 311 VIREHQDVLAGDQVIGHTTSGTHCPFLNYPVGMALIDPKYAEVGTQLQVDVRGRKVDVEV 370
>gi|297191932|ref|ZP_06909330.1| glycine cleavage system aminomethyltransferase T [Streptomyces
pristinaespiralis ATCC 25486]
gi|197721088|gb|EDY64996.1| glycine cleavage system aminomethyltransferase T [Streptomyces
pristinaespiralis ATCC 25486]
Length = 371
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 99/295 (33%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A+ L A++ + T+ AR + I G IL ++ ++ ED
Sbjct: 52 LSHMGEITVTGPQAVDLLNYALVGN-IGTVGLGRARYTMICREDGGILDDLIVYRLGEDE 110
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
+++ + ++D + + + + + ++ E S D
Sbjct: 111 YMVVANAGNAQIVLDAVTARAQGFDATVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170
Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
+ L+ RT E + K +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVEPQHAEKLWQALTEAGAPAGLIPCGLSC 230
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + + + P DA + + + K G ++G+E ++ R
Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKDGDFVGREALTAAAERAESAP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
RK +I +P +G ++ D IG + L A+A +D A
Sbjct: 288 PRKLVGLIAEGRRVPRAGMSVVADGTVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 342
>gi|189345960|ref|YP_001942489.1| glycine cleavage system aminomethyltransferase T [Chlorobium
limicola DSM 245]
gi|238692186|sp|B3EFX7|GCST_CHLL2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189340107|gb|ACD89510.1| glycine cleavage system T protein [Chlorobium limicola DSM 245]
Length = 362
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 46/226 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A FLQ + T D+ + A+ + +L G ++ +I +I+ +T+
Sbjct: 49 SHMGNFYVRGVRAGEFLQYLTTNDLSKVSDGEAQYNLMLYTDGGVVDDLIIYRIDAETYF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQE--HTFSNSSFIDE----- 118
L ++ S + + V +E + +++ F DE
Sbjct: 109 LIVNASNAQKDYAWIQKHIGAFEGVSLEDRTDELSLVALQGPMSGAILRKVFPDEDCNTL 168
Query: 119 ---RFSI-----ADVLLHRTWGHNEK-------IASDIKTY------------------- 144
RF ++L+ RT E+ + ++ +
Sbjct: 169 ASFRFRKVYYNGTELLIARTGYTGEQGVEICLPNEAALELWSVLMKAGEEYGIQPIGLGA 228
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
LR+ G + ST+ P +A + + + + KG +IG+E
Sbjct: 229 RDTLRLEMGYSLYGHEI-DSTVNPLEARLKWV--VKMEKGPFIGKE 271
>gi|110681233|ref|YP_684240.1| sarcosine dehydrogenase, putative [Roseobacter denitrificans OCh
114]
gi|109457349|gb|ABG33554.1| sarcosine dehydrogenase, putative [Roseobacter denitrificans OCh
114]
Length = 796
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 93/285 (32%), Gaps = 49/285 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A FLQ + ++ P A +A+L +G +I +D + L +
Sbjct: 491 IEVTGPDACAFLQHLAMRNMDR-PTGTAIYTALLNERGTFESDITAQRIADDHYRLFVGT 549
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-NQEHTFSNSSFIDE------------ 118
+ + L ++ +V ++ + VL + ++
Sbjct: 550 NAIKRDLAWALRHRDGFDVTLKDSTEDYAVLCLMGPDAARIIAATGAPELCQLGYFQVGP 609
Query: 119 --------RFSIADVLLHRTWGHNEKIASDIKTYHEL----------------RINHGIV 154
R + + W K + + Y L RI G
Sbjct: 610 AFIAGKHVRAARMSYVGEAGWEITCKAENALPIYTALKSSGAVPAGLYAQTSMRIEKGFA 669
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITGTDD- 212
+ S + P +A + + ++ G +IG Q + R+Q ++ + I D+
Sbjct: 670 AMGHEL-DSDLSPVEAGL---HHMAKKTGGFIGAQALADRVQ---TSKRSLVTIVFDDET 722
Query: 213 -LPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKGM 255
+P P+ IG + L A + V+ A+ G
Sbjct: 723 AVPLGHEPVYAGPDIIGQITSASYGYRLSAPVALAHVNPAVDGGA 767
>gi|317125139|ref|YP_004099251.1| aminomethyltransferase [Intrasporangium calvum DSM 43043]
gi|315589227|gb|ADU48524.1| aminomethyltransferase [Intrasporangium calvum DSM 43043]
Length = 368
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 49/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + T D+ + A+ + G ++ ++ E+
Sbjct: 57 SHLGKASVQGPGAAEFVNSCFTNDIRRISTGQAQYTLCCDESGGVVDDLIVYLRSEEDVF 116
Query: 67 LEIDRSKRDSLIDKLL--------------FYKL------RSNVIIEIQPI-------NG 99
L + + ++ +L Y + RS+ +++ + +
Sbjct: 117 LIPNAANTSEVVRRLKAAAPAGIEVTNLHDAYGVIAVQGTRSDEVLDALGLPTGHDYMSF 176
Query: 100 VVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIKTYHELR 148
V W T + R+ A L E + LR
Sbjct: 177 VEADWRGTPVIVCRTGYTGERGYELVPRWDDAPALWDAIVEAMAPFEGKPCGLGARDTLR 236
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G D I P A + K + G++ + + R +++T
Sbjct: 237 TEMGYPLHGQDLSLE-ISPVQARAGW--AVGWKKETFWGKDALLAEKANPPRLSRGLLVT 293
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262
G +P S + ++G + ALA+ D V + + V
Sbjct: 294 GRG-IPRSHCAVSVHGTQVGEVTSGTFSPTLKQGIALALLHPD-VAEGDTVEIDVRGRAV 351
Query: 263 RVKASFPH 270
+ P
Sbjct: 352 EARVVKPP 359
>gi|260941956|ref|XP_002615144.1| hypothetical protein CLUG_05159 [Clavispora lusitaniae ATCC 42720]
gi|238851567|gb|EEQ41031.1| hypothetical protein CLUG_05159 [Clavispora lusitaniae ATCC 42720]
Length = 286
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 104/275 (37%)
Query: 9 QSFIKVCGKSAIPFLQAIITA--------------------------------------D 30
+S+I++ G A FL +IT D
Sbjct: 10 RSYIRIKGPEASKFLNGLITTRLLPNVVKKKQHTISASENRHLELLNVDLSKNWGLMHED 69
Query: 31 VLTLPYKIAR-----GSAILTPQGKILLYFLISKIE-------EDTFILEIDRSKRDSLI 78
+ +I S IL +G+++ + E ++++E+D + ++
Sbjct: 70 IYDPENRIWIRRDGLNSMILNSKGRVVQDCFLYATPFHSPVPPEPSYLVEVDPKYKSQML 129
Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------------------- 106
++L ++V IE +N
Sbjct: 130 SLFKIHRLSADVKIEDASSMSSYYYFNDTPEFEDFLEELQSTYFDTFDTDSALQNANEFI 189
Query: 107 --EHTFSNSS-------FIDERFSIADVLLHRTWGHNEKI-------------ASDIKTY 144
E F +S+ D R + + T + + +D K
Sbjct: 190 SREEIFDSSAASNIVGFAFDNRIPNFGLKVVTTQPVDPLLLFSQQFMDKFPVEVTDEKAI 249
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ R +G+ + +++ P + +D +NG+
Sbjct: 250 TQRRFANGLFEYGDAPKGTSLLPFEMNLDYVNGLF 284
>gi|194334616|ref|YP_002016476.1| glycine cleavage system aminomethyltransferase T [Prosthecochloris
aestuarii DSM 271]
gi|238693305|sp|B4S437|GCST_PROA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|194312434|gb|ACF46829.1| glycine cleavage system T protein [Prosthecochloris aestuarii DSM
271]
Length = 363
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 64/266 (24%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ A FLQ + + DV L A+ + +L P+G I+ +I +I+ DT+
Sbjct: 49 SHMGNFMVKGRGAKAFLQHMTSNDVDKLSDGQAQYTLLLYPEGGIVDDLIIYRIDADTWF 108
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPIN---------------GVVLSWNQE 107
+ ++ S + L + L + V +E V + +
Sbjct: 109 MVVNASNMEKDYSWLQEHLGSF---EGVQLENHTEELSLIALQGPRSMEILDRVFTGGEC 165
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEK-----IASDIKT--Y---------------- 144
F F+ +V++ T E+ + +D T +
Sbjct: 166 SGIKPFHFRTVPFNGREVIVAATGYTGERGVEISVPNDAATALWVALMEAGSADGIQPIG 225
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE----------- 189
LR+ G + T P +A + + + KG ++G+E
Sbjct: 226 LGARDTLRLEMGYPLYGHEINRETS-PIEARLKWVTRLD--KGNFVGRESCVAVDINPQR 282
Query: 190 -VVSRIQHRNIIRKRPMIITGTDDLP 214
VV + H I ++ + D P
Sbjct: 283 TVVGFMMHERAIPRQGFTVYNRDRKP 308
>gi|254485532|ref|ZP_05098737.1| glycine cleavage T protein [Roseobacter sp. GAI101]
gi|214042401|gb|EEB83039.1| glycine cleavage T protein [Roseobacter sp. GAI101]
Length = 380
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 98/293 (33%), Gaps = 70/293 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A F+Q + D+ + + I G IL ++ ++ E+ F + + D
Sbjct: 67 VEITGPDAAKFVQMLTPRDLSKMAVGQCKYILITNADGGILNDPILLRLAENHFWISLAD 126
Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90
+S++D L +Y LR V
Sbjct: 127 SDILLWAQGVAVHSGLDVQIGEPDVSPLQLQGPKSGLIMQELFGESIMD-LKYYWLR-EV 184
Query: 91 IIEIQPINGVVLSWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
++ P+ W+ E S + ER A + GH I
Sbjct: 185 DLDGVPLIVSRTGWSSELGYELYLRDGSRGDLLWERIMAAGMEHGLKPGHTSSI------ 238
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
RI G++ + D + P++ D L + + +IG++ + RI+ RK+
Sbjct: 239 ---RRIEGGMLSYHAD-ADNKTNPYELGFDRLVNLDMDAD-FIGKDALRRIKENGPKRKQ 293
Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKV 247
++ D L + + EIG + V ALA+ +D
Sbjct: 294 VGLLIDCDPLKGPNTTFWTVNQGGKEIGKVTSAVYSPRLEKNIALAMVEVDAA 346
>gi|78048752|ref|YP_364927.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|123757401|sp|Q3BQN6|GCST_XANC5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78037182|emb|CAJ24927.1| glycine cleavage T protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 369
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPGARTKVIDLLDPADTAAAS 169
Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
D+ L RT E + + ++
Sbjct: 170 KLGRFAALQTRSRDGIDLFLARTGYTGEDGFEIVLPQEAAVAFWNALLAQGVKPAGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + R+
Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLEYQKAQGAPRQLI 287
Query: 205 MIITGTDDLPPSGSPIL--TDDIEI--GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +L + + EI GT +G KA+A AR+ + + +
Sbjct: 288 GVVMDEKGVLRHGQTVLTASGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345
Query: 261 GVRVKASF 268
V ++A
Sbjct: 346 QVPLRAVK 353
>gi|15597638|ref|NP_251132.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1]
gi|9948489|gb|AAG05830.1|AE004671_6 glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1]
Length = 373
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 92/311 (29%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G L++++ D+L LP R + QG IL +++ + D +
Sbjct: 55 SHMGQIRLVGADVALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
L ++ + + + L + L +E +L+ + + +
Sbjct: 114 LVVNAACKHQDLAHLRRH-LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFM 172
Query: 123 ---------------------------------ADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ L R E + LR+
Sbjct: 173 QFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D +T P +A + + G + G E + Q + + KR
Sbjct: 233 EAGLCLYGHDMDSATT-PVEASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRV 291
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ G+ I+ IG + G LA+ + + +
Sbjct: 292 GFLPQGRMPVREGAEIVDAQGRAIGKVSS--GGFGPSLNAPLAMGYVPSELAGLGSEVTA 349
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 350 MVRGKPVTLVV 360
>gi|307298271|ref|ZP_07578075.1| glycine cleavage system T protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916357|gb|EFN46740.1| glycine cleavage system T protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 368
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 98/307 (31%), Gaps = 49/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G AI F ++T V +L S + +G I+ L+ ++ +
Sbjct: 52 SHMGEIEIAGPDAIDFSDYLVTNSVSSLKNGAIVYSPMCNEKGGIVDDVLVYRLNNAKTM 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
++ S +D + K +V I+ + +++ S
Sbjct: 112 FVVNASNKDKDFKWITSNKGSFDVKIKDASADFAQIAFQGPRAEEILSEVSQVRLEKIPF 171
Query: 115 ----------------------------FIDERFSIADVLLHRTWGHNEKIAS-DIKTYH 145
++D ++A G + + +
Sbjct: 172 YHFEYGRVNGIKALVSRTGYTGEDGFELYVDPEAAVALWRKILELGSSIGVKPIGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR + + P +A + + + K +IG+EV+ K
Sbjct: 232 TLRFEAAYMLYGNELNDYNS-PLEAGLKWT--VKMEKD-FIGKEVLEEQLANGTKYKLKG 287
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHG 261
+ + G + + +IG + + K+LA+A ++K I + + + G
Sbjct: 288 LELSGKSIARHGFEVFDGEKKIGWITSGIFSPTLQKSLALAYLEKEYWKIGSEVQVEIRG 347
Query: 262 VRVKASF 268
R A+
Sbjct: 348 KRSPATV 354
>gi|116074178|ref|ZP_01471440.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9916]
gi|116069483|gb|EAU75235.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9916]
Length = 364
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 95/299 (31%), Gaps = 51/299 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G + LQ ++ D+ + A + +L G IL ++ + +DT +
Sbjct: 52 SHMGVLRFSGPNPKDALQKLVPTDLHRIGPGQACYTVLLNETGGILDDLIVYDMGDDTVL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSFID-ER 119
I+ + DS L S + I + +GV+L+ S +S + R
Sbjct: 112 AVINAACADSDRAWLEQQLSGSGISISDEKEDGVLLALQGPDAQRVLEGLSGTSLAELPR 171
Query: 120 FSI--------------------------------ADVLLHRTWGHNEKIASDIKTYHEL 147
F A L + + L
Sbjct: 172 FGQRMLPLPALGVDVLVARTGYTGEDGFELLLPHDAGRQLWSQLLNAGVTPCGLGARDSL 231
Query: 148 RINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
R+ + D +T P +A + L N + + QEV + RK
Sbjct: 232 RLEAAMHLYGNDMDTTTS-PLEAGLGWLVHLENPVDFIGRAALEQEVD-----QGSQRKL 285
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKK-GMALTVH 260
+ +P PIL + +GT+ L A + V A+ K G L V
Sbjct: 286 VGLRLEGRAIPRHDYPILDGEQTVGTVSSGGWSPCLEAGIGLGYVPKALAKVGTELAVE 344
>gi|240168272|ref|ZP_04746931.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
kansasii ATCC 12478]
Length = 365
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 93/298 (31%), Gaps = 50/298 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + +++D
Sbjct: 53 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIF 112
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 113 LVPNAANTAAVVGALQDVAPGDLAITNLHRSYAVLAVQGPRSTDVLSALGLPTDMDYMGY 172
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 173 ADSAYSGVPVRVCRTGYTGEHGYELLPPWETAGVVFDALVDAVSDAGGQPAGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + P I P A I K + G++ + + R+ R +
Sbjct: 233 TEMGYPLHGHELSPE-ISPLQARCGW--AIGWKKDAFFGRDALLAEKAAG-PRRLLRGLR 288
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ G L P G +L D +G +A+A ID D + G +TV
Sbjct: 289 MVGRGVLRP-GLTVLVGDTAVGVTTSGTFSPTLQAGIALALID-TDAEVPDGGQVTVD 344
>gi|294627310|ref|ZP_06705896.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292598392|gb|EFF42543.1| aminomethyltransferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 369
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMAEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R + I+ + G + + P A + N +
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQQAAVAFWNAL 216
>gi|297579611|ref|ZP_06941538.1| glycine cleavage system T protein [Vibrio cholerae RC385]
gi|297535257|gb|EFH74091.1| glycine cleavage system T protein [Vibrio cholerae RC385]
Length = 376
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 94/272 (34%), Gaps = 44/272 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D
Sbjct: 57 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ + + I L + L ++V +E+ ++ +
Sbjct: 116 VVVNAACKAQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMD 174
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150
+ I R + +K A+ + LR+
Sbjct: 175 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D P+T +L+ + + +G + G E++ S+I+ + + RKR
Sbjct: 235 CGLCLYGHDLDPTTTPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 294
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236
++ T G+ + +IG +
Sbjct: 295 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAG 326
>gi|329959919|ref|ZP_08298450.1| aminomethyltransferase [Bacteroides fluxus YIT 12057]
gi|328533216|gb|EGF59981.1| aminomethyltransferase [Bacteroides fluxus YIT 12057]
Length = 361
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 97/305 (31%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + +V L + + G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPKALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D++ ++ I+ +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAILALQKLTSIDLSALPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E +K + LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEVAMKIWDAVFEAGAEFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + ++ + + IRK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVDGKN-FTNRPMLEKQKTEGTIRKLVGFEMVDRG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + D IG++ + + + + + + ++
Sbjct: 294 IPRHGYELYSADGTAIGSVTSGTMSPVRKIGIGMGYVKPEFSKPGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|294634860|ref|ZP_06713382.1| glycine cleavage system T protein [Edwardsiella tarda ATCC 23685]
gi|291091733|gb|EFE24294.1| glycine cleavage system T protein [Edwardsiella tarda ATCC 23685]
Length = 366
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G + FL+ ++ DV L A SA+L G ++ ++ + E+ F
Sbjct: 52 SHMTIVDLHGPNVRAFLRYLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFLAENYF 111
Query: 66 ILEIDRSKRDSLI----DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ER 119
L ++ + R + + L + V + ++ ++ + +D +R
Sbjct: 112 RLVVNSATRARDLAWIGEHLPPFG----VELRVRDDLALIAVQGPNARQRVAELLDAEQR 167
Query: 120 FSIAD----------------------------------VLLHRTWGHNEKIASDIKTYH 145
++AD V R +
Sbjct: 168 LALADMKPFFARQIDSLFIATTGYTGEDGYEIALPLAEAVPFWRRLEQAGVRPCGLAARD 227
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR---- 201
LR+ G+ + + P A M +IG++ + R +H+ +
Sbjct: 228 TLRLEAGMNLYGQEM-DEQVSPLAANMAWTIAWEPETRDFIGRDALMRQRHQPHAQLVGL 286
Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
K + T L ++ I GT +G +A+AR+ A + + +
Sbjct: 287 LMREKGVLRAGMTVSLCTEQGEVVQGVITSGTFSPTLGCS-IALARV-PQGIAGEGRVNI 344
Query: 258 TVHGVRVKASFPH 270
V V P
Sbjct: 345 RGREVAVTLVKPS 357
>gi|300783736|ref|YP_003764027.1| aminomethyltransferase [Amycolatopsis mediterranei U32]
gi|299793250|gb|ADJ43625.1| aminomethyltransferase [Amycolatopsis mediterranei U32]
Length = 363
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 100/302 (33%), Gaps = 53/302 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ + I V GK A L A++ + + AR + I G +L ++ ++ ++
Sbjct: 49 LSHMAEIHVTGKQAADVLDFALVGN-LTGVKPGRARYTMICNESGGVLDDLVVYRLADEH 107
Query: 65 FILEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+++ + + D L V+ + ++ + S+ D
Sbjct: 108 YLVVANAGNAQVVADALEERVAGFDAVVDDRSETTALIAVQGPKAVEILSAVTDADLDAL 167
Query: 124 -------------DVLLHRTWGHNEK---------------------------IASDIKT 143
DVLL RT E + + +
Sbjct: 168 KYYASVPASVKGHDVLLARTGYTGEDGFELFVDADEAPALWRLLLEAGEPHGLVPAGLAC 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202
LR+ G+ + P +A + + + K G ++G+ + +++ R
Sbjct: 228 RDTLRLEAGMPLYGNELTVGQS-PFEAGLGRV--VKFEKPGDFVGRAALEERSKQDVPRV 284
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALT 258
R + P G +L D EIG + L A+A +D+ + G L+
Sbjct: 285 RVGLKGAGRRAPRHGYAVLAGDTEIGEVTSGALSPTLGYPIAMAYVDRAYA--EPGTELS 342
Query: 259 VH 260
V
Sbjct: 343 VD 344
>gi|127513992|ref|YP_001095189.1| glycine cleavage system aminomethyltransferase T [Shewanella
loihica PV-4]
gi|166221569|sp|A3QHI2|GCST_SHELP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|126639287|gb|ABO24930.1| glycine cleavage system T protein [Shewanella loihica PV-4]
Length = 364
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 101/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVTGAEACDFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLSDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F DE+ + +
Sbjct: 110 RIVVNSATREKDLAWITEQVKGYDVTVTERPELAMIAVQGPNAKAKAAAVFTDEQNAAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + N + LR+
Sbjct: 170 GMKPFFGVQSGSLFIATTGYTGEAGYEIIVPEAEAEALWQALLDNGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M +IG+E ++ I+ K ++
Sbjct: 230 EAGMNLYGQDM-DESVNPLAANMGWTIAWEPEDRDFIGREALAAIKAAGTD-KLVGLVME 287
Query: 210 TDDLPPSGSPIL---TDDIE------IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ +G P+ D +E GT +G ++A+AR+ + + +
Sbjct: 288 AKGVLRTGMPVFFTDADGVEQQGAITSGTFSPTLG-YSIAMARVPNSVGDV-AEVEMRKK 345
Query: 261 GVRVKASFPH 270
V VK P
Sbjct: 346 RVPVKVIAPS 355
>gi|296122702|ref|YP_003630480.1| glycine cleavage system T protein [Planctomyces limnophilus DSM
3776]
gi|296015042|gb|ADG68281.1| glycine cleavage system T protein [Planctomyces limnophilus DSM
3776]
Length = 363
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/308 (19%), Positives = 106/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A FL + T D+ L R +L G IL L+ D
Sbjct: 50 SHMGRLRFTGPDAREFLDEVQTVDLSKLKTGQIRYGFMLNESGGILDDILVYDWP-DAPQ 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--DER----- 119
L ++ S R+ L+ + R V IE + V+L+ H ++ + DE
Sbjct: 109 LVVNASNREKLLAWMTPLATRYAVSIEDLTLTRVMLAVQGPHAIDIAAQLLGDEVRQLKY 168
Query: 120 -------FSIADVLLHRTWGHNE-------KIASDIKTYHE------------------- 146
+S VL+ RT E S + +
Sbjct: 169 YTGKPMTWSNEPVLVSRTGYTGEDGVELIIDSGSALALWQAVLAAGESVGILPSGLGCRD 228
Query: 147 -LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
LR+ + + I P A + I L+K +IG+ + +I I R R
Sbjct: 229 TLRLEAAMPLYGHEL-SEEIDPLTAGLSF--AIKLSKPANFIGKTALEKIATGPIPRPRV 285
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + +P+++ + IG + K++A+A +D + + +
Sbjct: 286 GLTLDGKRIAREKTPVVSGENIIGEVTSGTFSPTFQKSIAMAYVDAAFAEPGTRLEVDIR 345
Query: 261 GVRVKASF 268
G R A+
Sbjct: 346 GKRESATV 353
>gi|150006317|ref|YP_001301061.1| glycine cleavage system aminomethyltransferase T [Bacteroides
vulgatus ATCC 8482]
gi|294776320|ref|ZP_06741802.1| aminomethyltransferase [Bacteroides vulgatus PC510]
gi|166221538|sp|A6L6X5|GCST_BACV8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149934741|gb|ABR41439.1| aminomethyltransferase [Bacteroides vulgatus ATCC 8482]
gi|294449837|gb|EFG18355.1| aminomethyltransferase [Bacteroides vulgatus PC510]
Length = 361
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99
+ ++ KL V + P
Sbjct: 116 IEKDWNWCVSHNTVGAELENASDRMAQLAIQGPKAMEVLQKLTP------VNLSEIPYYA 169
Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146
+ ++ SN+ + + A + + +
Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G D T P +A + + K + + ++ + + + RK
Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FTSRALLEKQKAEGLKRKLIAF 287
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+P G ++ D +IG + K + + + A+ + + V G
Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347
Query: 262 VRVKASF 268
++KA
Sbjct: 348 RKLKAVV 354
>gi|308048351|ref|YP_003911917.1| glycine cleavage system T protein [Ferrimonas balearica DSM 9799]
gi|307630541|gb|ADN74843.1| glycine cleavage system T protein [Ferrimonas balearica DSM 9799]
Length = 364
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L QG ++ + + + +
Sbjct: 50 SHMTVVDVEGDDARAFLRKLLANDVAKLTVPGKALYGGMLNEQGGVIDDLITYYLSDTQY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R ++ + V I +P ++ ++ + + A
Sbjct: 110 RLVVNSATRVKDLEWIGRQAQPFAVTITERPELAMIAVQGPNAKAKAATVFNAEQNAAVE 169
Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149
L + + + LR+
Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIVVPQNQAADLWQALLDAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D + P A M +IG+E + + K ++
Sbjct: 230 EAGMNLYGQDM-DEQVNPLAANMGWTIAWEPADRDFIGREALLAAKAAGTD-KLVGLVMT 287
Query: 210 TDDLPPSGSPIL---TDDIE------IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ +G + D +E GT +G A+A+AR+ K + + +
Sbjct: 288 EKGVLRAGLNVFFTDADGVEHQGVITSGTFSPTLG-HAIAMARVPKGIGE-QAEVEMRKK 345
Query: 261 GVRVKASFP 269
V V+ P
Sbjct: 346 RVAVQVVKP 354
>gi|62317431|ref|YP_223284.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 1 str. 9-941]
gi|83269412|ref|YP_418703.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis biovar Abortus 2308]
gi|189022685|ref|YP_001932426.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
S19]
gi|237816984|ref|ZP_04595976.1| glycine cleavage system T protein [Brucella abortus str. 2308 A]
gi|254698711|ref|ZP_05160539.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 2 str. 86/8/59]
gi|254732157|ref|ZP_05190735.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 4 str. 292]
gi|260544669|ref|ZP_05820490.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260759950|ref|ZP_05872298.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 4 str. 292]
gi|260763188|ref|ZP_05875520.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 2 str. 86/8/59]
gi|62197624|gb|AAX75923.1| GcvT, glycine cleavage system T protein [Brucella abortus bv. 1
str. 9-941]
gi|82939686|emb|CAJ12679.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
melitensis biovar Abortus 2308]
gi|189021259|gb|ACD73980.1| Glycine cleavage T protein (aminomethyl transferase) [Brucella
abortus S19]
gi|237787797|gb|EEP62013.1| glycine cleavage system T protein [Brucella abortus str. 2308 A]
gi|260097940|gb|EEW81814.1| glycine cleavage T protein [Brucella abortus NCTC 8038]
gi|260670268|gb|EEX57208.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 4 str. 292]
gi|260673609|gb|EEX60430.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 2 str. 86/8/59]
Length = 367
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAKAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|46198456|ref|YP_004123.1| glycine cleavage system aminomethyltransferase T [Thermus
thermophilus HB27]
gi|59797794|sp|Q72LB1|GCST_THET2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|46196078|gb|AAS80496.1| aminomethyltransferase [Thermus thermophilus HB27]
Length = 349
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 52/303 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ A+ FLQ D L A+ S + +G ++ + ++ E+ ++
Sbjct: 49 SHMGEFLVRGEEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS-NSSFIDERFS---I 122
+ ++ + + L V +E +L+ + +D S
Sbjct: 109 MVVNAANIAKDLAHLQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRK 168
Query: 123 ADVLLHRTWGHNEKIA---------------------------------SDIKTYHELRI 149
DV R G ++A + + LR+
Sbjct: 169 NDVFPARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALVEAGAKPAGLGARDSLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + P + + ++G+E + R+R + +
Sbjct: 229 EAGFPLYGHELT-EETNPLCTPWAW---VVKKEKAFLGKEAML----AQACRERLVGLVL 280
Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G +L+ +G + + ++ +A+A V+ + + V G V
Sbjct: 281 EGGIPREGYRVLSGGCPVGRVTSGGYSPLLQRGIALA---YVEEGAEGPFQVEVRGRAVP 337
Query: 266 ASF 268
A+
Sbjct: 338 AAL 340
>gi|313203098|ref|YP_004041755.1| aminomethyltransferase [Paludibacter propionicigenes WB4]
gi|312442414|gb|ADQ78770.1| aminomethyltransferase [Paludibacter propionicigenes WB4]
Length = 356
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + DV LP A+ S +G I+ L+ EE+ ++L ++ S
Sbjct: 56 VKGPNALAFLQKVTSNDVSVLPLGKAQYSCFPNGKGGIVDDLLVYHFEENKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|315504479|ref|YP_004083366.1| glycine cleavage system t protein [Micromonospora sp. L5]
gi|315411098|gb|ADU09215.1| glycine cleavage system T protein [Micromonospora sp. L5]
Length = 395
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 88/311 (28%), Gaps = 53/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ I+V G A F+ A +T D+ + A+ + G ++ + +D
Sbjct: 84 SHLGKIRVTGPGAADFVNACLTNDLGRITPGQAQYTLCCDDATGGVVDDIIAYLHADDHV 143
Query: 66 ILEIDRS----------------------------------KRDSLIDKLLF-----YKL 86
L + + + L+ L Y
Sbjct: 144 FLVPNAANTAEVARRLRAAAPAGVAVTDEHEAYAVLAVQGPRSAELLGALGLPTGHDYMS 203
Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
S ++ + V + ++A V ++ A +
Sbjct: 204 FSTATLD--GVELTVCRTGYTGELGYELVVASEHAVA-VWDALFAAADDVRACGLAARDT 260
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR G D P I P + K + G++ + + R +
Sbjct: 261 LRTEMGYPLHGQDLSPE-ITPVQGRSGW--AVGWDKPAFWGRDALRAEKAAGPARTLRGL 317
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID-KVDHAIKKGMALTV 259
+P G + D ++GT+ ALA+ D K+ + + +
Sbjct: 318 TAVDRAIPRPGMAVYAGDRQVGTVTSGTFSPTLKHGVALALVDTDPKLADGDELEVDIRG 377
Query: 260 HGVRVKASFPH 270
R++ + P
Sbjct: 378 RRARMRLTRPP 388
>gi|21243788|ref|NP_643370.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
axonopodis pv. citri str. 306]
gi|24636852|sp|Q8PI37|GCST_XANAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|21109379|gb|AAM37906.1| glycine cleavage T protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 369
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 109/308 (35%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYYMTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + R +V +E + ++ +D + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPSARTKVIDLLDPADTAAAS 169
Query: 124 ----------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
++ L RT E + + ++
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTGEDGFEIVLPQQAAVAFWNALLAQGVKPAGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + R+
Sbjct: 230 DTLRLEAGMNLYGQDMDDG-VTPYEAGLAWTIALDEGRD-FIGRSVLESQKAQGAPRQLI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT + E GT +G KA+A AR+ + + +
Sbjct: 288 GVVMDEKGVLRHGQTVLTANGEGEILSGTFSPTLG-KAIAFARV-PAGSIEQLRVDIRGK 345
Query: 261 GVRVKASF 268
V ++A
Sbjct: 346 QVPLRAVK 353
>gi|238759294|ref|ZP_04620460.1| Aminomethyltransferase [Yersinia aldovae ATCC 35236]
gi|238702455|gb|EEP95006.1| Aminomethyltransferase [Yersinia aldovae ATCC 35236]
Length = 348
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + R+ +D ++ + V + ++ +V ++ +
Sbjct: 93 RLVVNSATREKDLDWIIQHAEPYQVEVTVRDDLALVAVQGPTAQQKVATLLTP 145
>gi|218260322|ref|ZP_03475694.1| hypothetical protein PRABACTJOHN_01356 [Parabacteroides johnsonii
DSM 18315]
gi|218224607|gb|EEC97257.1| hypothetical protein PRABACTJOHN_01356 [Parabacteroides johnsonii
DSM 18315]
Length = 361
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 95/305 (31%), Gaps = 56/305 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ F+Q I + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQGITSNDASVLPIGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94
++ +L L S V E
Sbjct: 116 IAKDWDWCVSHNTVGAELENSSDRTAQLAIQGPKAVEVLQRLTPVDLSSIPYYAFVTGEF 175
Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150
V++S + F ++D+ +I + + G E I + LR+
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYLDDAMTIWNAIFE--AGKPEGIKPIGLGARDTLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G D T P +A + + K + + + R + + RK
Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRAELERQKKEGVTRKLCAFELVD 291
Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G I +D IG + + + + + + + V G
Sbjct: 292 KGIPRHGYEIADAEDNIIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTE--ICIKVRGRN 349
Query: 264 VKASF 268
+KA
Sbjct: 350 LKAQV 354
>gi|33599843|ref|NP_887403.1| glycine cleavage system aminomethyltransferase T [Bordetella
bronchiseptica RB50]
gi|59797852|sp|Q7WP31|GCST_BORBR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33567440|emb|CAE31353.1| glycine cleavage system T protein [Bordetella bronchiseptica RB50]
Length = 366
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 14/156 (8%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++
Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
D I + + +G ++ + +
Sbjct: 118 AGTADKDIAWMQR----------VAAADGFDVAIAPRRDLAMVAVQGPNARAKVWAARPA 167
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
W + + + + + G + T + F
Sbjct: 168 W---QAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200
>gi|258625496|ref|ZP_05720388.1| aminomethyltransferase [Vibrio mimicus VM603]
gi|258582202|gb|EEW07059.1| aminomethyltransferase [Vibrio mimicus VM603]
Length = 416
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 102/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+ ++ D++ LP R + QG I+ +++ + D
Sbjct: 97 SHMGQLRLYGAQAAAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLF 155
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ + ++ I L + L ++V +E+ ++ +
Sbjct: 156 VVVNAACKEQDIAHLKAH-LPADVEMEVIEDRALLALQGPKAAQVLSRLQPAVANMLFMD 214
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRIN 150
+ I R + +K A+ + LR+
Sbjct: 215 VQLLEIDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLE 274
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G E++ S+I+ + + RKR
Sbjct: 275 CGLCLYGHDLDQTTSPVEASLLWAIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVG 334
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + +IG + ++A + + +
Sbjct: 335 LVGQTKAPVREGTELFDAQGNKIGVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVR 394
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 395 GKMLPMTVEK 404
>gi|254372468|ref|ZP_04987957.1| glycine cleavage complex protein T [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570195|gb|EDN35849.1| glycine cleavage complex protein T [Francisella novicida GA99-3549]
Length = 358
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I+ Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVTIKPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|332300415|ref|YP_004442336.1| Aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707]
gi|332177478|gb|AEE13168.1| Aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707]
Length = 363
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + D L + S T QG +L FL+ + EE+ ++L + +
Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEENKYMLVPNAAN 116
Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92
K ++ +L L V
Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKIGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151
P N ++ + + +++ G E I + + LR+
Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D ++ + + ++ K +G+E + + + + RK
Sbjct: 236 GFCLYGNDIDDQHT-SLESGLGWITKLTDNKPDLVGREALLKQKAEGLTRKLVAFEMVDK 294
Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P I+ + +IG + + + K +A+ +
Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354
Query: 265 KASFPH 270
K P
Sbjct: 355 KVVKPP 360
>gi|313887101|ref|ZP_07820797.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923330|gb|EFR34143.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I]
Length = 363
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 51/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + D L + S T QG +L FL+ + EE+ ++L + +
Sbjct: 57 VKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVYRYEENKYMLVPNAAN 116
Query: 73 ---------------------------------KRDSLIDKLLFYKL------RSNV-II 92
K ++ +L L V
Sbjct: 117 VVKDWAWCLKQNDMGADLEDGSAKVGQLAVQGPKATQVLQRLTDINLLDIPYYHFKVGTF 176
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151
P N ++ + + +++ G E I + + LR+
Sbjct: 177 ADCP-NVIISNTGYTGCGGFELYFFPQYADKIWDAIFEAGKPEGIMPAGLGARDTLRLEA 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D ++ + + ++ K +G+E + + + + RK
Sbjct: 236 GFCLYGNDIDDQHT-SLESGLGWITKLTDNKPDLVGREALLKQKAEGLTRKLVAFEMVDK 294
Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P I+ + +IG + + + K +A+ +
Sbjct: 295 GIPRQHYDIVNEAGEKIGVVTSGTMSPALKVGIGMGYVSTEYSKIDSKIYIAVRKRNLEA 354
Query: 265 KASFPH 270
K P
Sbjct: 355 KVVKPP 360
>gi|281210648|gb|EFA84814.1| aminomethyltransferase [Polysphondylium pallidum PN500]
Length = 407
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 105/315 (33%), Gaps = 57/315 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK + F ++I+ AD+ LP ++ S T QG I+ +I+ E+ ++
Sbjct: 82 SHMGQLRIHGKDRVEFFESIVVADIQALPVGHSKLSVFTTEQGGIIDDTMITNAGENLYV 141
Query: 67 LEIDRSKRDSLIDKL--LFYKLRS---NVIIEIQPINGVVLSWNQEH----------TFS 111
+ ++ D I + + ++ +V +E+ ++ S
Sbjct: 142 V-VNAGCADKDIAHIKQKMAEFKATGKDVSLELMEDQALIAVQGPSTESIVSKLAKLDLS 200
Query: 112 NSSFIDERFSIAD--------------------------VLLHRTW---GHNEKIASDIK 142
N F+ +R + D V L + G + +
Sbjct: 201 NMEFMTQRHAKIDNIDVIITRCGYTGEDGFEISVSNSNAVRLAKILLDTGVEGVKCAGLG 260
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNI 199
LR+ G+ D I P +A + L IS + G + G V+ + +
Sbjct: 261 ARDSLRLEAGLCLYGHDL-NEEITPIEATLGWL--ISKRRKEAGGFPGAAVIQKQLKEGV 317
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253
+KR +I + + +IG + ++ + + K
Sbjct: 318 SKKRVGLIVEGPPARENTVLVDEAGKQIGHVTSGTLSPMTKQSISMCYLNTEHSKNGTKV 377
Query: 254 GMALTVHGVRVKASF 268
++ + S
Sbjct: 378 FASIRGRQIPAVVSK 392
>gi|189467771|ref|ZP_03016556.1| hypothetical protein BACINT_04163 [Bacteroides intestinalis DSM
17393]
gi|189436035|gb|EDV05020.1| hypothetical protein BACINT_04163 [Bacteroides intestinalis DSM
17393]
Length = 361
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 106/301 (35%), Gaps = 48/301 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKVQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D + ++ I+ +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTSINLSELPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K ++ LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGEEFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K +I + ++ + + +RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FINRPMLEKQKAEGTVRKLVGFEMVERG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+P G + T+ IG + K + + + + + + + G ++KA
Sbjct: 294 IPRHGYELFNTEGEAIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353
Query: 268 F 268
Sbjct: 354 V 354
>gi|114769617|ref|ZP_01447227.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha
proteobacterium HTCC2255]
gi|114549322|gb|EAU52204.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha
proteobacterium HTCC2255]
Length = 814
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 95/325 (29%), Gaps = 70/325 (21%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
+S+ I++ G+ A FL DV S L G I I+
Sbjct: 486 LYDMSSFGKIRIEGRDATGFLNFVAAGQY--DV---EIGKIVYSQFLNNTGGIEADVTIT 540
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL------------ 102
++ E +++ + R + L + + VI ++ GV+
Sbjct: 541 RLSETAYLVVTPAATRLADQIWLSRNVGNFNV---VITDVTAGEGVLAVMGPNSRKLLQM 597
Query: 103 -------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------ 143
QE R + L + +++ T
Sbjct: 598 VSPNRFDNEVNPFGTAQEIEIGMGLARVHRVTYVGELGWEIYASSDQAGHIFDTIFEAGQ 657
Query: 144 -----------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
LRI G D +A + + K +IG++ V
Sbjct: 658 DVGMKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVL 714
Query: 193 RIQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--R 243
R + + R+ ++ ++ L PIL D + +G L L +
Sbjct: 715 RKKENGLDRRLLQFVLNDSEPLLYHNEPILRDGVLVGHLTSGNYGHTIGAAIGLGYVPCK 774
Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268
+ V + + V GV++ A+
Sbjct: 775 NEAVSDILSSTYEIDVAGVKIAANV 799
>gi|33591440|ref|NP_879084.1| glycine cleavage system aminomethyltransferase T [Bordetella
pertussis Tohama I]
gi|59797850|sp|Q7W0E5|GCST_BORPE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33571082|emb|CAE40574.1| glycine cleavage system T protein [Bordetella pertussis Tohama I]
gi|332380841|gb|AEE65688.1| glycine cleavage system aminomethyltransferase T [Bordetella
pertussis CS]
Length = 366
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 14/156 (8%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++
Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
D I + + VV++ + + + + A +
Sbjct: 118 AGTADKDIAWMQR--------VAAADGFDVVIA-----PRRDLAMVAVQGPNARAKVWAA 164
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
+ + + + + G + T + F
Sbjct: 165 RPAWQAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200
>gi|297184315|gb|ADI20432.1| glycine/d-amino acid oxidases (deaminating) [uncultured alpha
proteobacterium EB080_L43F08]
Length = 814
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 95/325 (29%), Gaps = 70/325 (21%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
+S+ I++ G+ A FL DV S L G I I+
Sbjct: 486 LYDMSSFGKIRIEGRDATGFLNFVAAGQY--DV---EIGKIVYSQFLNNTGGIEADVTIT 540
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL------------ 102
++ E +++ + R + L + + VI ++ GV+
Sbjct: 541 RLSETAYLVVTPAATRLADQIWLSRNVGNFNV---VITDVTAGEGVLAVMGPNSRKLLQM 597
Query: 103 -------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------ 143
QE R + L + +++ T
Sbjct: 598 VSPNRFDNEVNPFGTAQEIEIGMGLARVHRVTYVGELGWEIYASSDQAGHIFDTIFEAGQ 657
Query: 144 -----------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
LRI G D +A + + K +IG++ V
Sbjct: 658 DVGMKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVL 714
Query: 193 RIQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--R 243
R + + R+ ++ ++ L PIL D + +G L L +
Sbjct: 715 RKKENGLDRRLLQFVLNDSEPLLYHNEPILRDGVLVGHLTSGNYGHTIGAAIGLGYVPCK 774
Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268
+ V + + V GV++ A+
Sbjct: 775 NEAVSDILSSTYEIDVAGVKIAANV 799
>gi|153833016|ref|ZP_01985683.1| glycine cleavage system T protein [Vibrio harveyi HY01]
gi|148870737|gb|EDL69643.1| glycine cleavage system T protein [Vibrio harveyi HY01]
Length = 376
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D
Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + ++ I L + L S + +EI ++ + + F E +
Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + G E + LR+
Sbjct: 176 VRKVELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D P + + G + G +++ + I+ +++ RKR
Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + D +IG + ++ R D + +
Sbjct: 296 LVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 356 GKMLPMTVEK 365
>gi|17560118|ref|NP_504502.1| hypothetical protein F25B4.1 [Caenorhabditis elegans]
gi|1458286|gb|AAB37080.1| Hypothetical protein F25B4.1 [Caenorhabditis elegans]
Length = 402
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 96/310 (30%), Gaps = 56/310 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK + F++++ TADV L S +G I +I K ++D L +
Sbjct: 82 ITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAGC 141
Query: 74 RDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQE--------------------- 107
+ + L RS V IE G+V E
Sbjct: 142 IEKDLPYLQENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKT 201
Query: 108 -----------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--SDIKTYHELR 148
+T + I + A+ L+ R + + LR
Sbjct: 202 TVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAGLGARDALR 261
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPMI 206
+ G+ +D +T P +A + + + + G E +V +++ ++ ++R +
Sbjct: 262 LEAGLCLYGSDIEENTT-PIEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSWPKRRVGL 320
Query: 207 ITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+ P S P++ D IG + A+A K +
Sbjct: 321 LAPAGRCPRSHLPLIDPLDKCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIGTKFVVDFG 380
Query: 259 VHGVRVKASF 268
V+
Sbjct: 381 AKQAPVEVVK 390
>gi|33595459|ref|NP_883102.1| glycine cleavage system aminomethyltransferase T [Bordetella
parapertussis 12822]
gi|59797851|sp|Q7W1C6|GCST_BORPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33565537|emb|CAE40178.1| glycine cleavage system T protein [Bordetella parapertussis]
Length = 366
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 14/156 (8%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FL+ ++ DV L A S +L PQG I+ +I D + + ++
Sbjct: 58 VDVGGADATAFLRRLVANDVARLATPGRALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVN 117
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
D I + + +G ++ + +
Sbjct: 118 AGTADKDIAWMQR----------VAAADGFDVAIAPRRDLAMVAVQGPNARAKVWAARPA 167
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIF 166
W + + + + + G + T + F
Sbjct: 168 W---QAASEPLAPFSAAAVEAGTLVARTGYTGEDGF 200
>gi|297620507|ref|YP_003708644.1| Aminomethyltransferase [Waddlia chondrophila WSU 86-1044]
gi|297375808|gb|ADI37638.1| Aminomethyltransferase [Waddlia chondrophila WSU 86-1044]
Length = 363
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 57/313 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A + + T +L A + G + ++ + ++F
Sbjct: 56 SHMGRVLIKGPGAEKLMDYLSTNRILGKKEFTATYTVWCDRSGGCIDDLIVYREGPESFF 115
Query: 67 LEIDRSKRDSLIDKLL-----------------------------FYKLRSN-------- 89
+ ++ R+ ++ L +L S
Sbjct: 116 IVVNAGNREKDLNHLKEVAKDFDASIEERYQDGILAVQGPNAKPLMSRLFSEAEGLKPMH 175
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK---IASDIKTYH 145
V+IE Q VVLS +IA L R + +
Sbjct: 176 FVLIEDQ----VVLSGTGYTGSGGYELYGPMDAIAP-LWDRLLEEGQAFGIQPVGLGARD 230
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G + + I P++++ + K ++G++ + ++ R +
Sbjct: 231 TLRLEMGFPLYGHEL-SADIAPNESVASW--AVKWDKEDFLGRQALESLEASGSKRTQAG 287
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+I + G + + +IGT+ K+A+AI ++ + + + + G
Sbjct: 288 VILKEKGIAREGCGVFRGEKKIGTVTSGTMSPSLKQAIAIILVE-GKIVSGETIDIEIRG 346
Query: 262 VRVKAS---FPHW 271
RVKA P W
Sbjct: 347 KRVKAEIVPLPFW 359
>gi|269963351|ref|ZP_06177681.1| aminomethyltransferase [Vibrio harveyi 1DA3]
gi|269831925|gb|EEZ86054.1| aminomethyltransferase [Vibrio harveyi 1DA3]
Length = 376
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D
Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + ++ I L + L S + +EI ++ + + F E +
Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + G E + LR+
Sbjct: 176 VRKVELLGGECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D P + + G + G +++ + I+ +++ RKR
Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + D +IG + ++ R D + +
Sbjct: 296 LVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 356 GKMLPMTVEK 365
>gi|238795228|ref|ZP_04638813.1| Aminomethyltransferase [Yersinia intermedia ATCC 29909]
gi|238725448|gb|EEQ17017.1| Aminomethyltransferase [Yersinia intermedia ATCC 29909]
Length = 348
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ ++ED F
Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLQEDYF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + RD + ++ + V + ++ +V ++ + A
Sbjct: 93 RLVVNSATRDKDLAWIIQHAEPYQVEVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAVA 152
Query: 126 LLHRTWG 132
+ +G
Sbjct: 153 GMKPFFG 159
>gi|325971841|ref|YP_004248032.1| Aminomethyltransferase [Spirochaeta sp. Buddy]
gi|324027079|gb|ADY13838.1| Aminomethyltransferase [Spirochaeta sp. Buddy]
Length = 372
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 95/284 (33%), Gaps = 56/284 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G+SA +L + T + + R + + P G ++ LI + + +F++ ++ S
Sbjct: 58 VSGESADAYLDYLCTNSISDMAVGQCRYTLMCYPNGTVVDDLLIYRRTDTSFLVVMNASN 117
Query: 73 ------------------------------------KRDSLIDKL-------LFYKLRSN 89
+ ++ L + RS
Sbjct: 118 TPKDLAWIKTDNPHAHLCPQVVDLSDATVQLALQGPLAEQILSTLVTDCASIKSFTFRSQ 177
Query: 90 VIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
E+ I ++ + E F D+ + D LL I + + L
Sbjct: 178 C--EVGEIMALISRTGYTGEDGFELYCASDDGPLLWDTLLE-AGKAYGLIPCGLGSRDTL 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ + + +I P +A + + + L K + G+E + + Q I R I
Sbjct: 235 RMEAKLPLYGHEI-SDSITPLEANLGVF--VKLEKADFCGREALLKQQEEGIPRTLRGIE 291
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKV 247
+P +G +L D +IG + L A A ID+
Sbjct: 292 MLDKAVPRNGYRVLLDGRDIGYVTSGNKSPTLGIFCAYALIDRA 335
>gi|156977182|ref|YP_001448088.1| glycine cleavage system protein T2 [Vibrio harveyi ATCC BAA-1116]
gi|156528776|gb|ABU73861.1| hypothetical protein VIBHAR_05968 [Vibrio harveyi ATCC BAA-1116]
Length = 376
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 98/310 (31%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D
Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118
+ ++ + ++ I L + L S + +EI ++ + + F E
Sbjct: 117 VVVNAACKEQDIAHLQAH-LPSGIELEIIDDRALLAIQGPKAAEVLARFAPEVAEMLFMD 175
Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + G E + LR+
Sbjct: 176 VRKVELLGVECIISRSGYTGEDGYEISVPAEKAEELARKLTGEEEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D P + + G + G +++ + I+ +++ RKR
Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRIG 295
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + + +IG + ++ R D + +
Sbjct: 296 LVGQTKAPVREGAELFDAEGNKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 356 GKMLPMTVEK 365
>gi|317508218|ref|ZP_07965898.1| glycine cleavage system T protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253393|gb|EFV12783.1| glycine cleavage system T protein [Segniliparus rugosus ATCC
BAA-974]
Length = 375
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 99/315 (31%), Gaps = 55/315 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ ++ D+ + A+ + L P G ++ + + ++
Sbjct: 58 SHLGKALVAGPGAAEFVNRTLSNDLARIRPGKAQYTLCLAPDGGVIDDLIAYYVSDEEIF 117
Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRSNVI--IEIQPINGVVLSWNQ---- 106
L + + S++ L Y + + V + + + + +
Sbjct: 118 LVPNAANTASVVAALQAVAPPEIQVTDEHRDYAVFA-VQGPLAKEAVERAGFAVPEEYMA 176
Query: 107 --EHTFSNSSF-------------------IDERFSIADVLLHRTWGHNEKI---ASDIK 142
E T+ S+ + +S+A + +K+ + +
Sbjct: 177 YTEETWDGSAGKQAPVKVCRTGYTGEQGYEVIPPWSVASEVFTALLNEVQKLGGEPAGLG 236
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G + I P A + I K + G+E V + R R
Sbjct: 237 ARDTLRTEMGYALHGHELALD-ISPVQAGVAW--AIGWKKPEFFGREAVVAEKERGPART 293
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDH-AIKKGMAL 257
+ +P G + + +G + +A+A +D + +++
Sbjct: 294 LLGLKALESGVPRRGYTVRKGEASVGEVTSGTFSPTLKTGVALALVDSASGVEVGDEVSI 353
Query: 258 TVHG--VRVKASFPH 270
V G +R + P
Sbjct: 354 DVRGRALRCEVVTPP 368
>gi|237784920|ref|YP_002905625.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
kroppenstedtii DSM 44385]
gi|237757832|gb|ACR17082.1| glycine cleavage system T protein [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 103/306 (33%), Gaps = 60/306 (19%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A L A+I+ + + A+ S + T G I+ + ++ +D
Sbjct: 63 LSHMGEVRVSGPQAAEALDHALISR-LSAVAVGKAKYSMMCTEDGTIIDDLITYRLADDE 121
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNV-------------IIEIQPING--VVLSWNQE-- 107
F++ + ++ KL R+ +I +Q N V+ S
Sbjct: 122 FLVIPNAGNAPTVASKL---VSRAEAFDCTVADESSETSLIAVQGPNAERVLASLPGADV 178
Query: 108 -------------HTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASD 140
T + I R + G +
Sbjct: 179 RNLAEVKYYAFFRGTVAGHDVIIARTGYTGEDGFEIFVPNSGAHDVWAAIMGTDAVTPCG 238
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + LR+ G+ + S P DA + +L +K ++G++ + +
Sbjct: 239 LASRDTLRLEAGMPLYGHELDRSHT-PVDAGLGVLAATK-SKDAFVGRDAIVAAKKNGAA 296
Query: 201 RKRPMIITGTDDLPPSG--SPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254
+K + + G + + +DD E+G + L A+A +D + G
Sbjct: 297 QK-LVGLKGDGRRAARAGYTVLTSDDKEVGEVTSGALSPTLGYPVAMAYVD--ADVAEPG 353
Query: 255 MALTVH 260
AL+V
Sbjct: 354 TALSVD 359
>gi|166712888|ref|ZP_02244095.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 369
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 63/173 (36%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMNEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + R +V +E + ++ ++ + A
Sbjct: 110 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIDLLEPADTAAAS 169
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R + I+ + G + + P +A + N +
Sbjct: 170 KLGRFAALQTRSRDGIELFLARTGYTG------EDGFEIVLPQEAAVAFWNAL 216
>gi|297153778|gb|ADI03490.1| putative dehydrogenase [Streptomyces bingchenggensis BCW-1]
Length = 812
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/310 (18%), Positives = 105/310 (33%), Gaps = 61/310 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
++V G+ A LQ + TA+V + +L G I ++++ F
Sbjct: 500 LEVTGRGAAGLLQRMTTANVDK-SVGSVTYTLMLDHNGGIRSDITVARLGRGHFQVGAGG 558
Query: 67 -LEID-------------------------------RSKRDSLIDK------LLFYKLRS 88
L++D R L D+ L +++ R
Sbjct: 559 NLDLDWLTRHLPEDGSVTVRDITGGTCCIGLWGPKARDMLQPLADQDFSNAGLRYFRAR- 617
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + LS+ E + + D + D L + IA+ ++ LR
Sbjct: 618 KAHIGPVPVTAMRLSYVGELGWELYTTADMGLKLWD-TLWEAARPHGGIAAGRGAFNSLR 676
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G TD P++A + + + KG +IG+ + R +R+R + +T
Sbjct: 677 LEKGYRSFGTDMTYEHD-PYEAGVGF--AVKMDKGDFIGRAALER--RAADVRRRLVCLT 731
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH-- 260
D + P+ +G + K +A A + G +LT+
Sbjct: 732 IDDPHAVVMGKEPVYDGARPVGYVTSAAYGYTIGKGIAYAWL--PADLATAGRSLTIGYF 789
Query: 261 GVRVKASFPH 270
RV A+
Sbjct: 790 DQRVPAAVAE 799
>gi|15807654|ref|NP_295535.1| aminomethyltransferase, putative [Deinococcus radiodurans R1]
Length = 447
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 33/264 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ FLQ + DV L A+ + + +G ++ I D ++
Sbjct: 180 SHMGEFRVTGPDALKFLQHVTPNDVSKLRPGRAQYNWLPNERGGLVDDIYIYMAAPDEYL 239
Query: 67 LEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFS------------- 111
+ ++ D L L + +V + + N +L+ +
Sbjct: 240 MVVNAGNIDKDWAHLN--ALTAGYDVQLANESDNWALLAVQGPQAAALLQPHTDVDLSAK 297
Query: 112 -NSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTD---- 159
+++ + DV L RT E A + EL + GI
Sbjct: 298 KKNAYFAAKLFGHDVRLARTGYTGEDGFEVFVDAAQAEALWDEL-LALGITPAGLGARDT 356
Query: 160 FLPSTIFP---HDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
FP H+ D+ S +E R + ++ + +
Sbjct: 357 LRLEAGFPLYGHEFGDDIHPLSSHYSWVVKDKEHHGRAGLQAAPTQKLIGLKLDKVPVRE 416
Query: 217 GSPILTDDIEIGTLGVVVGKKALA 240
G P+ +G + L
Sbjct: 417 GYPVKVGGEVVGRVTSGTTSPTLG 440
>gi|325922378|ref|ZP_08184152.1| aminomethyltransferase [Xanthomonas gardneri ATCC 19865]
gi|325547160|gb|EGD18240.1| aminomethyltransferase [Xanthomonas gardneri ATCC 19865]
Length = 379
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 7/173 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ + E+ F
Sbjct: 60 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMSEEFF 119
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + R +V +E + ++ +D S A
Sbjct: 120 RLVVNAATREKDLQWIGEQAARFDVRVEERSDFAMIAVQGPNARAKVIELVDPADSAAAS 179
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
L R I + G + + P DA + N +
Sbjct: 180 KLGRFAALQTHSRDGIALFLARTGYTG------EDGFEIVLPQDAAVAFWNAL 226
>gi|254437506|ref|ZP_05051000.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
gi|198252952|gb|EDY77266.1| Glycine cleavage T-protein (aminomethyl transferase)
[Octadecabacter antarcticus 307]
Length = 812
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 68/320 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G A FL V ++P + L +G I ++++
Sbjct: 487 MSSFGKIRVEGPDAEGFL-----NYVGGGDYSVPVGKIVYTQFLNHRGGIEADVTVTRMS 541
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102
E +++ + R L D++ + R + VI ++ GV+
Sbjct: 542 ETAYLVVTPAATR--LADQVWMERTRGDFNVVITDVTAGEGVLAVMGPNARKLLQAVSPA 599
Query: 103 ---------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147
Q+ R + L + ++ +T H
Sbjct: 600 DFTNAVNPFGTAQDIEIGMGVARVHRVTYVGELGWEVYISADQAGHVFETLHAAGQDFEL 659
Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
RI G D +A + + K +IG+E V Q
Sbjct: 660 TLCGMHMMDTCRIEKGFRHFGHDITCEDHV-MEAGLGF--AVKKDKPDFIGREAVLEKQE 716
Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIA--RIDKV 247
+ + +T + L PIL D +G L G L + +
Sbjct: 717 SGLNMRMVQFKLTDPEPLLYHNEPILRDGELVGYLSSGGYGHTLGGAMGLGYVPCKGETA 776
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ G + V G +V+A
Sbjct: 777 ADVLASGYEIDVMGTKVRAE 796
>gi|126740939|ref|ZP_01756623.1| putative oxidoreductase protein [Roseobacter sp. SK209-2-6]
gi|126718039|gb|EBA14757.1| putative oxidoreductase protein [Roseobacter sp. SK209-2-6]
Length = 809
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 47/276 (17%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS + I V G A+ LQ + TA V + A +A L +G + ++++
Sbjct: 485 LIDLSMFTKINVSGPDALALLQWVSTAHVD-VAEGRAVYTAWLNQRGGVEADLTVTRLGS 543
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSN---VII-EIQPINGVVLSWNQEHTFSNSSFIDE 118
+ F + + R + L R V + ++ V+ D+
Sbjct: 544 NLFRVTSGAATRRKDLYWLQKQA-RIKGFDVTLQDVTESEAVIGVMGPRARALLQDLSDD 602
Query: 119 -----------------------RFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147
R S L + +
Sbjct: 603 NWQEFDFSTARRVTVAGIECSATRISFVGELGWEIAMPAVQAPVLFDAFRAEGAGLLGIH 662
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D P I P +A + ++ TKG ++G+ +++ + + R+
Sbjct: 663 ALDGCRIEKGFKHWGHDLGPD-ISPLEAGIGF--AVNWTKGDFLGRIALAKQKQDGLTRR 719
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA 238
+ ++ + L P+ D +G G +
Sbjct: 720 QLLLEVEGEALLLHDEPVWERDKRVG--LTSSGARG 753
>gi|29829315|ref|NP_823949.1| glycine cleavage system aminomethyltransferase T [Streptomyces
avermitilis MA-4680]
gi|34921583|sp|Q82JI2|GCST_STRAW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|29606422|dbj|BAC70484.1| putative glycine cleavage system protein T [Streptomyces
avermitilis MA-4680]
Length = 372
Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + ++ AR + I G IL ++ +++E T
Sbjct: 53 LSHMGEITVTGPGAAALLNYALVGN-IASVGVGRARYTMICRADGGILDDLIVYRLQEQT 111
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
+++ + S ++D L V+ + + ++ E S D
Sbjct: 112 YLVVANASNAQVVLDALTERAGGFDAVVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 171
Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
+ L+ RT E A K +
Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPADAEKLWQALTEAGAPAGLVPCGLSC 231
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199
LR+ G+ + ++ P DA + + + K G ++G+ + + +N
Sbjct: 232 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKEGDFVGREALTEAAALAEKNP 288
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
R +I +P +G P++ IG + + +A+A +D A
Sbjct: 289 PRVLVGLIAEGRRVPRAGYPVVVGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHAA 343
>gi|188990672|ref|YP_001902682.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. campestris str. B100]
gi|167732432|emb|CAP50626.1| Glycine cleavage T protein [Xanthomonas campestris pv. campestris]
Length = 403
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 52/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ ++E+ F
Sbjct: 84 SHMTVVDLHGARVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFF 143
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + RD + + R V +E + ++ +D + A
Sbjct: 144 RLVVNAATRDKDLQWIGEQAARFEVRVEERADFAMIAVQGPNARSKVIDLLDPADASAAS 203
Query: 126 LLHRTWGHNEKI-------------------------ASDIKTYHELRINHGIVDPNT-- 158
L R + A + ++ L + HG+
Sbjct: 204 KLGRFAALQTRTRDGVALFLARTGYTGEDGFEIVLPQADAVAFWNAL-LAHGVAPAGLGA 262
Query: 159 --------------DFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
+ + P++A + I+L +G +IG+ V+ + + R+
Sbjct: 263 RDTLRLEAGMNLYGQDMDDDVTPYEAALAWT--ITLDEGRDFIGRSVLESQKAQGAARQM 320
Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
++ + G +L+ E GT +G KA+A AR+ + +
Sbjct: 321 IGVVMDEKGVLRHGQKVLSAGGEGEILSGTFSPTLG-KAIAFARV-PAGSIDDLRVDIRG 378
Query: 260 HGVRVKASF 268
V ++A
Sbjct: 379 KQVPLRAVK 387
>gi|163858394|ref|YP_001632692.1| glycine cleavage system aminomethyltransferase T [Bordetella petrii
DSM 12804]
gi|229807547|sp|A9I7L6|GCST_BORPD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|163262122|emb|CAP44424.1| glycine cleavage system T protein [Bordetella petrii]
Length = 366
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G A FL+ ++ DV L A S +L PQG I+ ++ D + + ++
Sbjct: 58 VDVTGPDATAFLRRLVANDVARLTVPGKALYSCMLNPQGGIIDDLIVYFFAADQWRVVVN 117
Query: 71 RSKRDSLIDKLLF 83
+ D + +
Sbjct: 118 AATADKDVAWMQR 130
>gi|170288534|ref|YP_001738772.1| glycine cleavage system T protein [Thermotoga sp. RQ2]
gi|238688827|sp|B1L9U1|GCST_THESQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|170176037|gb|ACB09089.1| glycine cleavage system T protein [Thermotoga sp. RQ2]
Length = 364
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 65/304 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ F+ +IT + +LP A S + G I+ ++ K+ D +
Sbjct: 49 SHMGEFLVKGPEAVSFIDFLITNNFSSLPDGKALYSVMCNENGGIIDDLVVYKVSPDEAL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ ++ + + + + + S V + I ++ + +++
Sbjct: 109 MVVNAANIEKDFNWIKSH---SKNFNVEVSNISDTTALIAFQGPRAQEALQELVEDSLEE 165
Query: 123 -------------ADVLLHRTWGHNE-------KIASDIKTYHEL--------------- 147
+ ++ RT E + + K + L
Sbjct: 166 IAYYSFKKSIVAGVEAIVSRTGYTGEDGFELMIEAKNSPKVWDALMNLLRKIDGRPAGLG 225
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
R+ + D P + + + + L K ++G+E + ++ + + +
Sbjct: 226 ARDVCRLEATYLLYGQDM-DENTNPFEVGLSWV--VKLDKD-FVGKE--ALLKAKEKVER 279
Query: 203 RPMIITGTDD-LPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
+ + + + + G + + +G + ALA+ V ++K G
Sbjct: 280 KLVALELSGKRIARKGYEVSKNGERVGEITSGNFSPTLGKSIALAL-----VSKSVKIGD 334
Query: 256 ALTV 259
L V
Sbjct: 335 QLGV 338
>gi|226941640|ref|YP_002796714.1| glycine cleavage system aminomethyltransferase T [Laribacter
hongkongensis HLHK9]
gi|226716567|gb|ACO75705.1| GcsT [Laribacter hongkongensis HLHK9]
Length = 368
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 97/309 (31%), Gaps = 54/309 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A +L+ +I DV L A S +L G ++ ++ +
Sbjct: 53 SHMTVVDLTGPDAQAYLRRLIANDVAKLAPLGKALYSGMLNAAGGVIDDLIVYLTA-WGY 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------------- 108
+ ++ + RD + + +V + +P ++
Sbjct: 112 RVVVNAATRDKDLAWMQAQAASFDVTLTERPELAMLAVQGPCAISKFCAARPACAALVQS 171
Query: 109 ----------TFSNSSFIDER------------FSIAD-VLLHRTWGHNEKIASDIKTYH 145
T + R AD L + +
Sbjct: 172 LSIFQGLPCCTDGPDGWFVARTGYTGEDGLEIMLPAADAAALWQDLLAAGVAPCGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D +I P A M + +IG++V+ + R + K+
Sbjct: 232 TLRMEAGMNLYGHDM-DESISPLKAGMGWTIDLKDAGRQFIGRDVIEAQKARGVSMKQVG 290
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259
++ + G ++ D G G K+A+AIAR V A A+ V
Sbjct: 291 LVLEGRGVLREGMKVVVDG--AGEGITTSGTFSPTLKQAIAIAR---VPAATTDRAAVEV 345
Query: 260 HGVRVKASF 268
G V A
Sbjct: 346 RGQLVAARV 354
>gi|325274662|ref|ZP_08140713.1| glycine cleavage system aminomethyltransferase T [Pseudomonas sp.
TJI-51]
gi|324100204|gb|EGB97999.1| glycine cleavage system aminomethyltransferase T [Pseudomonas sp.
TJI-51]
Length = 360
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E +
Sbjct: 50 SHMTVIDVDGSDATAWLQRLLANDVARLVDTGKALYSPLLQAQGGVIDDLIVYRTEH-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + R ++ L + V +++P ++ + S A
Sbjct: 109 RLVTNAATRAKVLGWLQQQRDGFAVDFKVRPDLAILAIQGPRAREK----VAPLLSAARA 164
Query: 126 LLHRTWGHNEKIASDIK 142
L R E A
Sbjct: 165 ALIRELRPFEGFAEGDW 181
>gi|154251405|ref|YP_001412229.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
gi|154155355|gb|ABS62572.1| glycine cleavage T protein (aminomethyl transferase) [Parvibaculum
lavamentivorans DS-1]
Length = 433
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 96/302 (31%), Gaps = 56/302 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G+ A P+L ++T + L A + G +L ++ +++ED + L + +
Sbjct: 105 RIAGRDARPYLDRLVTRSLDRLEIDRALHVVLCEGSGFVLGDGMLFRLDEDEYRLVTEET 164
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID------------ 117
L+D +++R IE + +S + + +D
Sbjct: 165 HLAWLLDSAAGFRVR----IEDVSASLAAISLQGPLAAAILAEAGVVDIADILPSASRWT 220
Query: 118 ---------ERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------------RINH 151
R L + W + + E R+
Sbjct: 221 EIAGMPAYLSRTGANGDLGYEIWIDPDDAPHAWRHLLEHSAARGLVPAGFALRELARLEA 280
Query: 152 GIVDPNTDFLPSTIFPHDAL----MDLL--NGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G D+L + A DL I K + G+E + R+ ++R +
Sbjct: 281 GFPRAGKDYLSAFAAIDSADARTPFDLWPEPLIDFEKPLFNGREALRRL-VLVESQRRLV 339
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ P + I + ++GT + ALA + A AL + V+
Sbjct: 340 PLVVDGLEPVRFAAIHANARQVGTATSIGFSPALA----ANIALATIDVAALAAPDLTVR 395
Query: 266 AS 267
A
Sbjct: 396 AE 397
>gi|318607042|emb|CBY28540.1| aminomethyltransferase (glycine cleavage system T protein)
[Yersinia enterocolitica subsp. palearctica Y11]
Length = 365
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTRDFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ ++ ++ + V + ++ +V ++ + A
Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169
Query: 126 LLHRTWG 132
+ +G
Sbjct: 170 GMKPFFG 176
>gi|332160491|ref|YP_004297068.1| glycine cleavage system aminomethyltransferase T [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325664721|gb|ADZ41365.1| glycine cleavage system aminomethyltransferase T [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330863926|emb|CBX74014.1| aminomethyltransferase [Yersinia enterocolitica W22703]
Length = 365
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTRDFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ ++ ++ + V + ++ +V ++ + A
Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169
Query: 126 LLHRTWG 132
+ +G
Sbjct: 170 GMKPFFG 176
>gi|168003343|ref|XP_001754372.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694474|gb|EDQ80822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 83/283 (29%), Gaps = 60/283 (21%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G AI FL+ ++ AD+ L S G ++ +I+K+
Sbjct: 41 SLFDVSHMCGLSLKGPDAIDFLETLVVADIKGLAPGTGTLSVFTNENGGVIDDTVITKVS 100
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--- 118
+D L ++ R + L + ++ G + W+ S +
Sbjct: 101 DDHIYLVVNAGCRKKDLAHLKKH-------LKPFQDTGKSVGWHIHDERSLLALQGPLAA 153
Query: 119 ----------------------RFSIADVLLHRTWGHNEK----IASDIKTYHE------ 146
+ ++ L RT E D
Sbjct: 154 DILQTLTKEDLSKMYFSDFKVIDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMD 213
Query: 147 ----------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQE 189
LR+ G+ D I P +A + G +G ++G E
Sbjct: 214 KGQGKIRLTGLGARDSLRLEAGLCLYGNDLE-QHISPIEAGLAWTVGKRRRAEGNFLGAE 272
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ R + ++R I+ + + IG +
Sbjct: 273 TILRQIKDGVSKRRVGFISTGAPARAHSEILDLEGNNIGEITS 315
>gi|167753016|ref|ZP_02425143.1| hypothetical protein ALIPUT_01280 [Alistipes putredinis DSM 17216]
gi|167659330|gb|EDS03460.1| hypothetical protein ALIPUT_01280 [Alistipes putredinis DSM 17216]
Length = 369
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G A FLQ I T DV L + + + +G I+ L+ +I+ +T++
Sbjct: 49 SHMGEVWVKGPKAEAFLQHITTNDVAALYDGKVQYTTMPNGKGGIVDDLLVYRIDAETYL 108
Query: 67 LEIDRSKRD 75
L I+ + D
Sbjct: 109 LVINAANID 117
>gi|328676568|gb|AEB27438.1| Aminomethyltransferase (glycine cleavage system T protein)
[Francisella cf. novicida Fx1]
Length = 358
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVTITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDISTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|326402221|ref|YP_004282302.1| aminomethyltransferase [Acidiphilium multivorum AIU301]
gi|325049082|dbj|BAJ79420.1| aminomethyltransferase [Acidiphilium multivorum AIU301]
Length = 366
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 94/298 (31%), Gaps = 49/298 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L+ ++T D+ L R + ++ QG I+ +++ + D +L ++ +
Sbjct: 61 LEGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVANLG-DRLLLVLNAGR 119
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----RF--------- 120
++ + + + L + V + Q ++ E +S E RF
Sbjct: 120 KNVDVAHIRAH-LPATVSLTPQFDRALLALQGPEAGAVLASLAPEVAAMRFMEAREMALS 178
Query: 121 -----------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
+ A+ L + + LR+ G+
Sbjct: 179 GISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSLRLEAGLPLYG 238
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215
D T P A + G + G ++G + V R H R+R + + P
Sbjct: 239 NDI-DETRDPIAAGLGFAIGKTRKMGWDFLGGDAV-RAVHDAGPRERLVGLRAEGRAPVR 296
Query: 216 SGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G+ + G + V G AL R D L + +
Sbjct: 297 AGAELRDAAGQPAGRVTSGTFGPSVNGPVALGYVRADCAGDDSTLIAGLRGRDIGITV 354
>gi|229593242|ref|YP_002875361.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
fluorescens SBW25]
gi|229365108|emb|CAY53328.1| aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens SBW25]
Length = 360
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A SA+L +G ++ ++ + E +
Sbjct: 50 SHMTVIDVTGPQAKEWLQRLLANDVERLHGCGRALYSAMLNEKGGVVDDMIVYRTEA-AY 108
Query: 66 ILEIDRSKRD 75
L ++ + RD
Sbjct: 109 RLVVNAATRD 118
>gi|254502791|ref|ZP_05114942.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222438862|gb|EEE45541.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 825
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 88/308 (28%), Gaps = 60/308 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A +L ++ + + +L +G+I L + ++ D F L
Sbjct: 501 IEVSGPEAETYLDRLVANKLPK-KVGGITLTHMLNRRGRIELELTVVRLGPDRFYLVCAA 559
Query: 72 SKRDSLIDKLLFY------------------KL---RSNVIIEI---QPINGVVLSW--N 105
L+D L + L R+ ++ ++ W
Sbjct: 560 FFEQRLLDHLAQHLGGETVTVRNLSTDWGAMALNGPRARDVLAPNTSAALDNASFRWLTA 619
Query: 106 QEHTFSNSSFIDERFSIADVLLH--------------RTWGHNEKIASDIKTY-----HE 146
QE + R S A L W E + + Y +
Sbjct: 620 QEIEVAGRKLWAFRMSYAGELGWEFHVPWEDMLAVYDALWATGESLG--LMDYGSFAMNA 677
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G + P +M + L KG ++G+E ++ + +
Sbjct: 678 LRLEKGF-KGAGELTNEVTLPEANVMRF---VKLDKGDFLGREETAKSAESALPWVCVYL 733
Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMALT 258
D + G +L D +G + A A + + + + +
Sbjct: 734 EVEPDGVADGHGGEAVLMDGKVVGATSSIAYGHSVGKILAFAYVKPEAAKAGTELEVVVM 793
Query: 259 VHGVRVKA 266
+
Sbjct: 794 NGARAARV 801
>gi|183599849|ref|ZP_02961342.1| hypothetical protein PROSTU_03366 [Providencia stuartii ATCC 25827]
gi|188022121|gb|EDU60161.1| hypothetical protein PROSTU_03366 [Providencia stuartii ATCC 25827]
Length = 364
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 104/309 (33%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ + +D +
Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDIAKLTDKGKALYTGMLNASGGVIDDLIVYYLNDDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ + RD I + + V IE++ ++ S +
Sbjct: 110 RLVVNSATRDKDIAWIEQHMKSYPVSIEVRDDLALLAVQGPTAQQKVHSLLTPSQCALLA 169
Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTYHE----------------LRI 149
+ + + A ++ +H+ LR+
Sbjct: 170 DMKPFYGVQADELFIATTGYTGEKGYEIALPKAQVVEFWHQLLKAGVHPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D TI P A M +IG+E + +++ + + +++
Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALEKLKEQGTEKLVGIVMRE 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
L + TDD +G L V +A+AR+ K + K + +
Sbjct: 289 KGILRAGQTVRFTDD--LGKLQEGVITSGSFSPTLGFSIALARVPK-EIQDKAIVEIRNR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EMPVEVVKP 354
>gi|307943574|ref|ZP_07658918.1| aminomethyl transferase family protein [Roseibium sp. TrichSKD4]
gi|307773204|gb|EFO32421.1| aminomethyl transferase family protein [Roseibium sp. TrichSKD4]
Length = 377
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 96/305 (31%), Gaps = 60/305 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A Q + D+ L + ++ G +L + K+ ED + + I
Sbjct: 70 VELVGPDAGRLAQMLTPRDLSNLTVGRCFYTPMVDETGGMLNDPVALKLAEDRYWVSIAD 129
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------R 119
S I L Y LR V ++ ++ + + + F D+ +
Sbjct: 130 SDLLYWIKGLA-YALRLEVDVDEPDVSPLAIQGPKAEDLVARVFGDQIRSIGFFRYEYVQ 188
Query: 120 FSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINHGI 153
F ++L R+ + + RI G+
Sbjct: 189 FQGQHMVLARSGYSKQGGFEFYVDGSHNGEPLWDAFMKAGEDLNVRAGCPNLIERIESGL 248
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ D + PH+ + GC +G++ + R+ +R+ + D +
Sbjct: 249 LSYGNDMTRNNT-PHECGLGKFCQTQKAIGC-VGRDALLRVAVEGPVRQIRHLAIDGDPV 306
Query: 214 PPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
PP PI ++G + A+ + R+ D+ G RV+
Sbjct: 307 PPCKDLWPIFAGGKKVGNVSSAAWSPDFRTNVAIGMVRMTHWDN-----------GTRVE 355
Query: 266 ASFPH 270
P
Sbjct: 356 VETPD 360
>gi|123965544|ref|YP_001010625.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199910|gb|ABM71518.1| aminomethyltransferase GcvT-like protein [Prochlorococcus marinus
str. MIT 9515]
Length = 282
Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 31/255 (12%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK + FL IT + + L+P G IL L E+ + +
Sbjct: 20 SITGKDSKRFLNG-ITTGNIVNLNNNVLQTCWLSPNG-ILKSLLEINCLENKLDVIVFVG 77
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN------QEHTFSNSSFIDERFSIADVL 126
+ I I P + V+LS Q NS + + +
Sbjct: 78 NTSEIRKYFN--------EI-IFPSDDVLLSDTFSINRLQHVDDINSWRVTQPIFFHNKD 128
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
+ +N + +IN I +++ P + + L + KGCY+
Sbjct: 129 KEYAFYNNNPNLMNTNDLQSWKINQAIPSLDSEI-NGKNNPLELGLADL--VDFNKGCYL 185
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP---ILTD---DIEIGTLGVVVGK---- 236
GQE +S+I++ + +++ + T D + S I + + +G + +
Sbjct: 186 GQETMSKIRNVSSLKQEIRVWTAKDRVINIESDSKKIYNNQNKEKTVGYITSIYKSDSLT 245
Query: 237 -KALAIARIDKVDHA 250
K LA+ + +D
Sbjct: 246 TKGLALIKRKYLDKE 260
>gi|228906473|ref|YP_932791.2| glycine cleavage system aminomethyltransferase T [Azoarcus sp.
BH72]
Length = 363
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A +L+ ++ DV L A + +L P G ++ ++ ++ ++ +
Sbjct: 53 SHMLALDLTGPDATAWLRRLLANDVAKLRTAGKALYACMLNPTGGVIDDLIVYRLSDNQY 112
Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER 119
+ ++ D + + + +NV + + + + + S +F + R
Sbjct: 113 RIVVNAGTADKDVQWMRRQIGEMPANVTLTPRRDLAMIAVQGPHAREASWKAFPELR 169
>gi|300789375|ref|YP_003769666.1| sarcosine oxidase subunit alpha [Amycolatopsis mediterranei U32]
gi|299798889|gb|ADJ49264.1| sarcosine oxidase subunit alpha [Amycolatopsis mediterranei U32]
Length = 845
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/320 (17%), Positives = 102/320 (31%), Gaps = 62/320 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + G ++ + ++ E+ F+
Sbjct: 515 STLGKIDVQGPDAGWFLDMLYTNMMSTLKVGRIRYGVMCGVDGMVIDDGTVIRVGEERFL 574
Query: 67 LEIDRSKRDSLID-----------KLLFYKL--------------RSN-VIIEIQPINGV 100
+ +++ L + RS V+ + P V
Sbjct: 575 VTTTTGNAAKILEWMEEWLQTEWPHLRVFATSVTEHWATIPLVGPRSREVLGRLAPDLDV 634
Query: 101 ------VLSWNQEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIASDI 141
++W ++ + R S + L L ++
Sbjct: 635 SNDAFGFMTWQDAEVAGLAARV-CRISFSGELAYEINVPSWHGPALWQSIVDQGATPYGT 693
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+T H LR G D T+ P D + +S K +IG+ +R ++ R
Sbjct: 694 ETMHVLRAEKGYPIIGQD-TDGTVTPQDLGLSW--AVSKKKADFIGKRSFARAENNRPDR 750
Query: 202 KRPMIITGTDD--LPPSGSPILTDD-------IEIGTLGVVVGKKAL----AIARIDKVD 248
K+ + + D L P GS I+ + +G + AL A+A +
Sbjct: 751 KQFVGLLPVDPSVLLPEGSQIIESEVVPEPPVRMLGHVTSSYDSAALGRTFALALVRSGR 810
Query: 249 HAIKKGMALTVHGVRVKASF 268
I + + + V V +
Sbjct: 811 ERIGETLYVPVGDQVVPVTV 830
>gi|119669991|emb|CAL93904.1| glycine cleavage system T protein [Azoarcus sp. BH72]
Length = 335
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A +L+ ++ DV L A + +L P G ++ ++ ++ ++ +
Sbjct: 25 SHMLALDLTGPDATAWLRRLLANDVAKLRTAGKALYACMLNPTGGVIDDLIVYRLSDNQY 84
Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEI-QPINGVVLSWNQEHTFSNSSFIDER 119
+ ++ D + + + +NV + + + + + S +F + R
Sbjct: 85 RIVVNAGTADKDVQWMRRQIGEMPANVTLTPRRDLAMIAVQGPHAREASWKAFPELR 141
>gi|309361917|emb|CAP29233.2| hypothetical protein CBG_09336 [Caenorhabditis briggsae AF16]
Length = 403
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 60/313 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK + F++++ TADV L S +G I +I K ++D L +
Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAG 140
Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------H 108
D + L R+ V IE G+V E
Sbjct: 141 CIDKDLPYLLENAAAWRAKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMK 200
Query: 109 TFSNSSF---------------------IDERFSIADVLLHRTWGHNEKIA--SDIKTYH 145
T S F +D + A+ L+ R + +
Sbjct: 201 TTVGSVFGIDGCRVTRCGYTGEDGVEISVDP--TKAEQLVDRLLASQAGKVKLAGLGARD 258
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKR 203
LR+ G+ +D +T P +A + + + + G E +V +++ ++ ++R
Sbjct: 259 ALRLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRR 317
Query: 204 PMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
++ P S P++ D IG + A+A K +
Sbjct: 318 VGLLAQPGRCPRSHLPLIDPLDKCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIV 377
Query: 256 ALTVHGVRVKASF 268
V+
Sbjct: 378 DFGAKQAPVEVVK 390
>gi|300722106|ref|YP_003711388.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Xenorhabdus nematophila ATCC
19061]
gi|297628605|emb|CBJ89179.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Xenorhabdus nematophila ATCC
19061]
Length = 365
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 97/309 (31%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ D+ L A + +L G ++ ++ ++ +
Sbjct: 50 SHMTIVDLHGSGCRDFLRYLLANDIAKLTEQGKALYTGMLNASGCVIDDLIVYFFTDNFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER----- 119
+ ++ + R+ + L + ++ +V I ++ ++ + S DE+
Sbjct: 110 RMVVNSATREKDLAWLEQHAVKYDVEITVRDDLALIAVQGPNAQSKVQSLLSDEQKHAVA 169
Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + LR+
Sbjct: 170 GMKPFFGVQSGDLFLATTGYTGEAGYEIALPKEQAEDFWQQLLVAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + T+ P A M +IG+E + R + ++ + +
Sbjct: 230 EAGMNLYGQEM-DETLSPLAANMGWTIAWKPEDRQFIGREALERQRETGT--EQLVGLVM 286
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ G I++ + G + V +A+AR+ + + +
Sbjct: 287 REKGVLRGGLIVSFTDDSGEVRSGVITSGTFSPTLGFSIALARV-PQGIGEQAIVQIRNR 345
Query: 261 GVRVKASFP 269
+ VK P
Sbjct: 346 EMPVKVVKP 354
>gi|304392636|ref|ZP_07374576.1| sarcosine dehydrogenase [Ahrensia sp. R2A130]
gi|303295266|gb|EFL89626.1| sarcosine dehydrogenase [Ahrensia sp. R2A130]
Length = 831
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 90/310 (29%), Gaps = 64/310 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G+ A FL + DV +P + L +G I ++++ E +
Sbjct: 506 MSSFGKIRVIGRDAEKFLNRVCGNDVA-VPTGKIVYTQFLNERGGIEADVTVTRLSEQEY 564
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
I+ + + + + V I ++ GV+
Sbjct: 565 IVVTPAATVPRELSWMRRHLEDEAVAIVDMTAAEGVLAVMGPNARTLLEKVSHHDWSNDN 624
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144
E + R + L + + A +T
Sbjct: 625 HPFGQAHEIELGMGTARAHRVTYVGELGWELYMPTDMCAHAFETLMNAGADMDLKLCGMH 684
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LRI G D +A + + K +IG++ V + + + +
Sbjct: 685 MMDSLRIEKGYRHFGHDITEEDHV-VEAGLGF--AVKTAKENFIGRDAVLKKREQG-LEM 740
Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
R D LP PI+ D + + ++ G A+ +
Sbjct: 741 RMTQFKLKDPLPLLYHNEPIIRDGEIVSYVTS--------------ANYGHTVGGAIGMG 786
Query: 261 GVRVKASFPH 270
V K+ P
Sbjct: 787 YVPCKSEKPD 796
>gi|238752287|ref|ZP_04613766.1| Aminomethyltransferase [Yersinia rohdei ATCC 43380]
gi|238709448|gb|EEQ01687.1| Aminomethyltransferase [Yersinia rohdei ATCC 43380]
Length = 365
Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + RD ++ + + V + ++ +V ++ + A
Sbjct: 110 RLVVNSATRDKDLEWITQHAEPYQVDVTVRDDLALVAVQGPTAQQKVATLLTPEQQQAIA 169
Query: 126 LLHRTWG 132
+ +G
Sbjct: 170 GMKPFFG 176
>gi|120403281|ref|YP_953110.1| FAD dependent oxidoreductase [Mycobacterium vanbaalenii PYR-1]
gi|119956099|gb|ABM13104.1| FAD dependent oxidoreductase [Mycobacterium vanbaalenii PYR-1]
Length = 823
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 70/291 (24%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A LQ + TADV + + + +L +G +++ +D +++ +
Sbjct: 498 LVGGDAEAALQWLCTADV-GVEVGRSVYTGMLNARGTYESDVTVTRTGQDEYLIVSSAAT 556
Query: 74 RDSLIDKLLFYKLRSNVI-----------IEIQPINGV----------VLSWNQEHTFSN 112
+ D + RS + +++ V VLS + S+
Sbjct: 557 TERDKDHI-----RSQIRRRWPDGANAHLVDVTSAYAVFGVMGPRSREVLSALTDADLSD 611
Query: 113 SSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP- 156
++F R + L + E + HG+
Sbjct: 612 AAFPFGTSRQISLGYATVRATRITYVGELGWELYVPAEFAVGVYEDLLAAGQRHGVARGG 671
Query: 157 ----------------NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ PS P +A + + ++G++ V R +
Sbjct: 672 YYAIESLRLEKGYRAFGRELTPSE-NPVEAGLLFACKLKTDIA-FLGRDAVERARTEG-P 728
Query: 201 RKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIAR 243
R+R + + + G IL D G + LA R
Sbjct: 729 RRRLVSFRVDSPEPMLWGGELILRDGAVAGQATSAAWGQTVGAAVGLAYLR 779
>gi|268557774|ref|XP_002636877.1| Hypothetical protein CBG09336 [Caenorhabditis briggsae]
Length = 402
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 60/313 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK + F++++ TADV L S +G I +I K ++D L +
Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAG 140
Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------H 108
D + L R+ V IE G+V E
Sbjct: 141 CIDKDLPYLLENAAAWRAKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMK 200
Query: 109 TFSNSSF---------------------IDERFSIADVLLHRTWGHNEKIA--SDIKTYH 145
T S F +D + A+ L+ R + +
Sbjct: 201 TTVGSVFGIDGCRVTRCGYTGEDGVEISVDP--TKAEQLVDRLLASQAGKVKLAGLGARD 258
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKR 203
LR+ G+ +D +T P +A + + + + G E +V +++ ++ ++R
Sbjct: 259 ALRLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRR 317
Query: 204 PMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
++ P S P++ D IG + A+A K +
Sbjct: 318 VGLLAQPGRCPRSHLPLIDPLDKCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIV 377
Query: 256 ALTVHGVRVKASF 268
V+
Sbjct: 378 DFGAKQAPVEVVK 390
>gi|238786185|ref|ZP_04630135.1| Aminomethyltransferase [Yersinia bercovieri ATCC 43970]
gi|238712902|gb|EEQ04964.1| Aminomethyltransferase [Yersinia bercovieri ATCC 43970]
Length = 365
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTLPGKALYSGMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V I ++ +V
Sbjct: 110 RLVVNSATRDKDLAWITQHAEPYQVEITVRDDLALVAVQGPTA 152
>gi|86136952|ref|ZP_01055530.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. MED193]
gi|85826276|gb|EAQ46473.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. MED193]
Length = 816
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ ++V G A FL I A++ ++P + L P+G I ++++ E +
Sbjct: 491 MSSFGKLRVEGPDAEAFLNYICGANL-SVPVGKIVYTQFLNPRGGIEADVTVTRMSETAY 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
++ R + ++ + V+I ++ GV+
Sbjct: 550 LVVTPAITRLADQTWMMRHVGDFRVVITDVTAGEGVLAVMGPNARKLLEKVSPNDFSNDV 609
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
QE R + L + ++ +T HE
Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYMSSDMAGHAFETLHEAGQDMGLKLCGMH 669
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIR 201
RI G D DA + + K +IG++ V +R + +R
Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDHV-IDAGLGF--AVKTDKPDFIGRDAVLARKESGPKMR 726
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIKK 253
+T + L P++ D +G + A+ + + +K +
Sbjct: 727 MMQFKLTDPEPLLYHNEPLIRDGEIVGYISSGNYGHTLGAAIGMGYVPCEGEKATDVLGS 786
Query: 254 GMALTVHGVRVKAS 267
+ V G RV+A
Sbjct: 787 SYEIEVMGARVQAE 800
>gi|167036241|ref|YP_001671472.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
putida GB-1]
gi|166862729|gb|ABZ01137.1| glycine cleavage system T protein [Pseudomonas putida GB-1]
Length = 360
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L QG ++ L+ ++ E+ +
Sbjct: 50 SHMTVIDVDGTDATAWLQRLLANDVARLDDVGKALYSPLLHEQGGVIDDLLVYRM-ENGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + R ++D L + V + +P ++ ++ + A
Sbjct: 109 RLVTNAATRAKVLDWLEQQRAGFAVNFQPRPDLAILAIQGPHAREKVAALLSP----ARA 164
Query: 126 LLHRTWGHNEKIASDIK 142
L R E +A
Sbjct: 165 ALIRELRPFEGVAEGDW 181
>gi|160940405|ref|ZP_02087750.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
gi|158436985|gb|EDP14752.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
Length = 362
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 56/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A+ + ++T D + AR S + G ++ ++ KI+++++
Sbjct: 51 SHMGEILLSGPDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNSYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFS---- 121
+ ++ S +D + + + +V + +I G + + D
Sbjct: 111 IVVNASNKDKDYQWMKDH-VSGDVELKDISGQVGQLALQGPKALDVLKKVADPDAIPDKY 169
Query: 122 ------------------------------IADVLLHRTW-------GHNEKIASDIKTY 144
+A R W I +
Sbjct: 170 YTFKKDCCIDGIPCIISKTGYTGEDGVEIYMAGNDAPRLWELLLEAGREEGLIPCGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKR 203
LR+ + + TI P +A + + + + K +IG++ +Q + + RKR
Sbjct: 230 DTLRLEASMPLYGHEM-DDTITPKEAGLGIF--VKMDKEDFIGKKA---LQEKGPLTRKR 283
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKKGMALT 258
+ + P+ + +IGT +G A A+A +D + +
Sbjct: 284 VGLKVTGRGIIREHEPVFAGEQQIGTTTSGTHCPYLGYPA-AMALVDIAYKEPGTQVEVD 342
Query: 259 VHGVRVKASF 268
V G RV A
Sbjct: 343 VRGRRVGAEV 352
>gi|145250567|ref|XP_001396797.1| NAD dehydrogenase [Aspergillus niger CBS 513.88]
gi|134082318|emb|CAL00413.1| unnamed protein product [Aspergillus niger]
Length = 852
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 92/280 (32%), Gaps = 55/280 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ ++V G A LQ + T+D+ P + +L QGKI ++++E D F
Sbjct: 509 LTSFHRVQVSGPGAATLLQRLTTSDITA-PPGAITHTLLLNRQGKIRSDIFVARLEPDLF 567
Query: 66 IL------EIDRSKRDSLIDK-------------------LLFYKLRSNVIIE-IQPING 99
+ ++ ++ + + + RS +I + +
Sbjct: 568 QIGANTATDVAYLAVEARRQRQHTPAQWVQVSDITGSTCCIGLWGPRSRAVIRAVSNDDF 627
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLH----------RTWGH-------NEKIA 138
+ + T + R S L R W + IA
Sbjct: 628 STTALPYMSVKRATIAGIPITALRKSYVGELGWEVQTSAEYGSRLWDALWQAGKPHGLIA 687
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQ-EVVSRIQH 196
+ + LR+ GI D P +A + + + L K Y+G+ + S Q
Sbjct: 688 AGRSAMNALRLEKGIRTYGVDMTTEHD-PLEAG--VFHLVDLDKKEEYVGKAALQSAAQR 744
Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVV 234
+ +R +T D + P+ +G + V
Sbjct: 745 KQPPLRRLRCLTIDDGHSMVMGKEPVYFGGKPVGYVTTAV 784
>gi|119716817|ref|YP_923782.1| FAD dependent oxidoreductase [Nocardioides sp. JS614]
gi|119537478|gb|ABL82095.1| FAD dependent oxidoreductase [Nocardioides sp. JS614]
Length = 826
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 53/280 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ LQ + ADV +P + L +G +++ + F+L +
Sbjct: 519 VAGPGALAGLQWVCAADVD-VPVGRCVYTPFLNERGTYEADLTVTRTGPEEFLLVSSSAT 577
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGV---------VLSWNQEHTFSNSSFIDER-FSIA 123
+D L + + + + E + GV + + +F R ++
Sbjct: 578 TVRDLDWLARHGVPAEDVTERYAVLGVMGPRARSLLAACSPDDWSEEGFAFATSREVTVG 637
Query: 124 DVLLHRT---------WGHNEKIASDIKTYHE----------------LRINHGIVDPNT 158
VLL T W +A + Y LR+ G
Sbjct: 638 GVLLRATRMTYVGELGWELTIPVADAVTVYDAVRAGGAVDAGYYAIESLRLEKGYRAFGR 697
Query: 159 DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-----NIIRKRP--MIITGTD 211
+ P + P +A + G++ G ++G+ + +HR R+R +++ +
Sbjct: 698 ELTPD-LGPVEAGLVFATGLAGD-GDFLGR--TALREHRAALADGGPRRRVVSLVLESLE 753
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARID 245
+ G +L D G + + LA+ R D
Sbjct: 754 PMLWGGELLLRDGDPAGQVTSAAWGETVGSCVGLALLRAD 793
>gi|300115118|ref|YP_003761693.1| glycine cleavage system T protein [Nitrosococcus watsonii C-113]
gi|299541055|gb|ADJ29372.1| glycine cleavage system T protein [Nitrosococcus watsonii C-113]
Length = 371
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 97/308 (31%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ PFL+ ++ +V L A S +L QG ++ ++ + E F
Sbjct: 50 SHMTVVDLKGEKVRPFLRQLLANNVDRLSDPGTALYSCMLNEQGGVIDDLIVYLMAEQEF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------- 106
L + RD ++ + + V +E +P ++
Sbjct: 110 RLISNAGTRDKVLSWVESHAAPFKVQVEERPELAMIAVQGPKARAQVHGQLSESLKEKVA 169
Query: 107 -----EHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148
+ T+ F+ R R + LR
Sbjct: 170 NLKRFQATWEEGLFV-ARTGYTGEDGYELLLSGPQAQDWWRRLQAGGAKPCGLGARDTLR 228
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ D P +A + + +IG+ V+ Q ++ ++
Sbjct: 229 LEAGMCLYGADM-DEATTPLEAGLGWTVAWKPPERDFIGRAVLEAQQAAGCPHQQVGLLL 287
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGV 262
L +G I T+ +G V G +++A+AR+ V + + V
Sbjct: 288 QGKGLMRNGQAITTN---LGEGVVTSGGFSPTLERSIALARV-PVGADSSCEVQIRGRAV 343
Query: 263 RVKASFPH 270
P
Sbjct: 344 PAAMVKPP 351
>gi|254465220|ref|ZP_05078631.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
gi|206686128|gb|EDZ46610.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
Length = 816
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 97/319 (30%), Gaps = 66/319 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G A FL I A+V ++P + L P+G I ++++ E +
Sbjct: 491 MSSFGKIRVEGPDAEKFLNYICGANV-SVPAGKIVYTQFLNPRGGIEADVTVTRLSETAY 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVL------------------ 102
++ R + + +R+ V+ ++ GV+
Sbjct: 550 LVVTPAVTRLADQTWM----MRNKGGFNVVLTDVTAGEGVLAVMGPNARKLLQRVSPNDF 605
Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE-------- 146
QE R + L + E +T +
Sbjct: 606 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYIPAEMSGHAFETLWEAGQDMGLKL 665
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI G D DA + ++ K +IG+ V +
Sbjct: 666 CGMHMMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVATGKDDFIGKAAVLERKETG 722
Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVD 248
+ R + TD P PI+ D +G L A+ + + +
Sbjct: 723 -PKARMVQFKLTDPEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAA 781
Query: 249 HAIKKGMALTVHGVRVKAS 267
+ + V GV+VKA
Sbjct: 782 DVLGSTYEIDVCGVKVKAE 800
>gi|33241300|ref|NP_876242.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|59797846|sp|Q7V9I2|GCST_PROMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33238830|gb|AAQ00895.1| Glycine cleavage system T protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 373
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 92/297 (30%), Gaps = 63/297 (21%)
Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS----- 58
S+ + GK A LQ ++ +D+ + A + +L G I+ ++
Sbjct: 51 SHMGVFSIQGKNPKDA---LQTLVPSDLHRIGPGEACYTVLLNNDGGIIDDLIVYDLGTN 107
Query: 59 -KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT-------F 110
E+ ++ I+ + ID + + N+ + +GV+L+ +
Sbjct: 108 DPNNEECILIVINAGCTQADIDWIKEHLSDKNLKVCNAKGDGVLLALQGPDSTNQLRNVL 167
Query: 111 SNSSFIDERF------------------------------------SIADVLLHRTWGHN 134
S +F + A L R N
Sbjct: 168 GESLTNIPKFGHREIQVQLKTHPVSFSIFIARTGYTGEDGYEILLNTNAGKSLWRELIEN 227
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ LR+ G+ D +T P +A + L + T +IG+ + +
Sbjct: 228 GVTPCGLGARDTLRLEAGMPLYGNDI-NNTTTPFEAGLGWLVHLE-TPDEFIGKAALVKQ 285
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID 245
+ I +K + + G I+ + +G + ALA ID
Sbjct: 286 TNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPID 342
>gi|302525061|ref|ZP_07277403.1| glycine cleavage system T protein [Streptomyces sp. AA4]
gi|302433956|gb|EFL05772.1| glycine cleavage system T protein [Streptomyces sp. AA4]
Length = 375
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 108/306 (35%), Gaps = 61/306 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ + I V G A L A++ + + AR + I G +L ++ ++ ++
Sbjct: 61 LSHMAEIHVRGPQAADVLDYALVGN-LTGVKPGRARYTMICDADGGVLDDLVVYRLADEE 119
Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + D+L +++ + + +++ + + +++ + + +
Sbjct: 120 YLVVANAGNATVVADALAERVAGF----DAVVDNRSADTALIAVQGPKAVDVLAAVTDAD 175
Query: 121 SIA--------------DVLLHRTWGHNE-------KIASDIKTY--------------- 144
A +VLL RT E A +
Sbjct: 176 LAALKYYASMPAVVKGHEVLLARTGYTGEDGFELFVPAAEAPALWALLTEAGQEHGLVPC 235
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRN 198
LR+ G+ + + P A + + + K G ++G+ + ++ +
Sbjct: 236 GLACRDTLRLEAGMPLYGNELSRE-LNPFAAGLGRV--VKFEKPGDFVGRAALEELKKAD 292
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254
+ R R + P G +L+ D IG + L A+A +D+ + G
Sbjct: 293 VPRVRVGLRGTGRRAPRHGYAVLSGDATIGEITSGALSPTLGYPIAMAYVDR--EHAEPG 350
Query: 255 MALTVH 260
AL+V
Sbjct: 351 TALSVD 356
>gi|296394497|ref|YP_003659381.1| glycine cleavage system protein T [Segniliparus rotundus DSM 44985]
gi|296181644|gb|ADG98550.1| glycine cleavage system T protein [Segniliparus rotundus DSM 44985]
Length = 374
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 58/304 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ ++ D+ + A+ + L P G ++ + + ++
Sbjct: 58 SHLGKALVAGPGAAEFVNRSLSNDLGRIRPGKAQYTLCLAPDGGVIDDLIAYYVSDEEIF 117
Query: 67 LEIDRSKRDSLIDKL--------------LFYKL------RSNVIIE----IQPINGVVL 102
L + + S++ L Y + RS +++ P +
Sbjct: 118 LVPNAANTASVVAALEAVAPPEIRVTDQHRDYAVFAVQGPRSQEVLDGLGAAYPEEYMAY 177
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------------ 144
Q + ++ + R R + A +
Sbjct: 178 VDAQVPVETGAATV--RICRTGYTGERGYELIPSWADAPAVFTAVLEQVKALGGEPAGLG 235
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G + I P + + K + G+E V + + RK
Sbjct: 236 ARDTLRTEMGYALHGHELALD-ISPVQGGVGW--AVGWKKPEFFGREAVVAEKEQGPRRK 292
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ +P G P+ D IG + ALA+ HA+ G
Sbjct: 293 LFGLKALESGVPRRGYPVRKGDEAIGEVTSGTFSPTLKTGVALALV---DAAHAVAVGDQ 349
Query: 257 LTVH 260
+ +
Sbjct: 350 VGID 353
>gi|239617994|ref|YP_002941316.1| glycine cleavage system T protein [Kosmotoga olearia TBF 19.5.1]
gi|239506825|gb|ACR80312.1| glycine cleavage system T protein [Kosmotoga olearia TBF 19.5.1]
Length = 368
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 94/314 (29%), Gaps = 51/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +A+ F ++T V L + + G ++ L+ + ED +
Sbjct: 52 SHMGEIEITGPNALIFADYLVTNSVSGLKNGEICYTPMCNENGGVVDDLLVYRFSEDKIL 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
++ + D + + + R NV ++ L++
Sbjct: 112 FVVNAANTDKDFEWVKKHSARFNVEVKNISSETAQLAFQGPRAEEFLQEIAQVKLSEIPF 171
Query: 110 --FSNSSF--IDERFSIADVLLHRTWGHNEKIASDIKTY--------------------H 145
F+ ID S + + +
Sbjct: 172 YHFTEGKVVGIDCIISRTGYTGEDGFELYTSPEGAVPLWRKILEIGAPYGVKPIGLGARD 231
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR + + I P +A + + L K +IG++ + + + K
Sbjct: 232 TLRFEACYMLYGNEL-NDEITPLEAGLKWT--VKLDKD-FIGKDKLLKQLENGLEYKLRG 287
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259
I +P G + D +IG + + ALA + + + +
Sbjct: 288 IELVEKGIPRHGYEVYADGEKIGWVSSGMLSPTLKKPVALAYLKKGYWKRGTEVEIKIRS 347
Query: 260 HGVRVKASFPHWYK 273
V+ + +Y+
Sbjct: 348 KMVKAVVTKTPFYR 361
>gi|258591473|emb|CBE67774.1| glycine cleavage system T-protein (aminomethyltransferase) [NC10
bacterium 'Dutch sediment']
Length = 370
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 91/312 (29%), Gaps = 47/312 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A+ +Q + D L + SA+ TP+G + + K +D +
Sbjct: 56 SHMGEIEITGPGALDAIQRLTPNDASRLSVGEVQYSALTTPEGTFVDDITVYKFADDRYG 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ + + + + + S V + + +L+
Sbjct: 116 VTVNAANIEKDYAWIREH-VPSGVEVRNASDDRALLAIQGPRAQEILGKLTSVELGTLRY 174
Query: 110 ----FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD--FLPS 163
+ ID S + + ++ L + G
Sbjct: 175 FRFVEGQAIGIDCCISRTGYTGEDGFEVYIPPQHTVTLWNAL-LEAGTPVGLQPCGLGAR 233
Query: 164 TIFPHDALMDLLNG----------------ISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+A M L + L KG +IG+E ++R + I RK
Sbjct: 234 DTLRLEAKMALYGQDIDDRHTVLEADLGWIVKLEKGEFIGREALARQKAAGISRKLVGFE 293
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV-----VVG-KKALAIARIDKVDHAIKKGMALTVHG 261
+ I+ IG + +G L + + + +
Sbjct: 294 MCGRGIARPHYAIVNGSQPIGEVTSGGPSPSLGKNIGLGYVAVQHAAIGTEFDIVIRGQP 353
Query: 262 VRVKASFPHWYK 273
V + +YK
Sbjct: 354 VAARVVRTPFYK 365
>gi|114328488|ref|YP_745645.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316662|gb|ABI62722.1| aminomethyltransferase family protein [Granulibacter bethesdensis
CGDNIH1]
Length = 632
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 92/289 (31%), Gaps = 63/289 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69
++ G A L +T D+ L +A+ P G ++ + ++ + TF L
Sbjct: 310 EITGPDAEKLLNYAVTRDISKLSIGQIVYTALCHPHGGMIDDATVFRMSQHTFRLICGRE 369
Query: 70 -----------------------DRSKRDSLIDKLLFYKLRSNV------IIEIQPINGV 100
D+ SL L L S V + + +
Sbjct: 370 WCGTWLRMLASEKDFKVWVRSSTDQLHNISLQGPLSRIIL-STVFSPYLTQPDAKDLKWF 428
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKT 143
S S + R L + + H + + +
Sbjct: 429 HFSTGMLGKHDPSPVMISRTGYTGELGYEIFCHPQHAGSVWDAVMEAGKNHALKPAGLDA 488
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRK 202
+ LRI G+ +F T P +A + + +S K Y+G+ + ++ + R
Sbjct: 489 LNMLRIEAGLAFAGYEFCDQTD-PFEAGIGFV--VSQKKQSDYVGK--TALLERGSAYRN 543
Query: 203 RPMIITGTD-DLPPSGSPILTDDIEIGTLGV-----VVGKKALAIARID 245
R + D G + ++G + ++G + +A+ARID
Sbjct: 544 RLAGLVIEGNDTVFHGDGVYNGMAQVGIITSPVFSPILGSQ-IALARID 591
>gi|187930552|ref|YP_001901039.1| glycine cleavage system aminomethyltransferase T [Ralstonia
pickettii 12J]
gi|238691849|sp|B2UG80|GCST_RALPJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|187727442|gb|ACD28607.1| glycine cleavage system T protein [Ralstonia pickettii 12J]
Length = 375
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKL 81
L ++ + ++ +
Sbjct: 111 RLVVNAGTAPTDLEWI 126
>gi|169629036|ref|YP_001702685.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
abscessus ATCC 19977]
gi|169241003|emb|CAM62031.1| Probable aminomethyltransferase/Glycine cleavage system T protein
[Mycobacterium abscessus]
Length = 364
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 98/312 (31%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A T D+ + A+ + T G ++ + + +D
Sbjct: 52 SHLGKALVRGPGAAAFVNACFTNDLNKVGPGKAQYTLCCTETGGVIDDLIAYYVSDDEIF 111
Query: 67 LEIDRSKRDSLIDKLLF--------------YKL------RS------------------ 88
L + + +++ L Y + RS
Sbjct: 112 LVPNAANTSAVVAALQEQAPEGIAVTNQHRDYAVLAVQGPRSADVLQRLGLPTDMEYMAY 171
Query: 89 -NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
+ + P+ + EH + D+ ++ D LL ++A + L
Sbjct: 172 ADATLAGLPVRVCRTGYTGEHGYELLPSWDDAGAVFDALLPVITEAGGQLAG-LGARDTL 230
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206
R G + I P A + K + G+E +++ + R R +
Sbjct: 231 RTEMGYPLHGHELSLD-ISPVQARAGW--AVGWKKDAFWGREALTQEKTDGPRRTLRGLR 287
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH-- 260
TG L P + +L+D IG +A+A +D I G ++ V
Sbjct: 288 ATGRGVLRPDLT-VLSDGQSIGVTTSGTFSPTLKTGIALALLDTAAQ-IPDGASVVVDVR 345
Query: 261 --GVRVKASFPH 270
+ + P
Sbjct: 346 GREIECEVVKPP 357
>gi|241664739|ref|YP_002983099.1| glycine cleavage system aminomethyltransferase T [Ralstonia
pickettii 12D]
gi|240866766|gb|ACS64427.1| glycine cleavage system T protein [Ralstonia pickettii 12D]
Length = 375
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKL 81
L ++ + ++ +
Sbjct: 111 RLVVNAGTAPTDLEWI 126
>gi|85707207|ref|ZP_01038293.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
217]
gi|85668261|gb|EAQ23136.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
217]
Length = 1003
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 84/272 (30%), Gaps = 51/272 (18%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+S + S I V G A FL + T + +L R + G ++ ++++I
Sbjct: 664 LSLLDASTLGKIIVKGPDAGKFLDMLYTNVMSSLKPGKCRYGLMCNENGFLMDDGVVARI 723
Query: 61 EEDTFILEIDRSKRDSLIDKL-----------LFY----------------KLR---SNV 90
+EDTF+ +S+ + Y K R + +
Sbjct: 724 DEDTFLCHTTTGGAESIHGHMEDWLQCEWWDWKVYTANVTEQYAQIAVVGPKARETLAKL 783
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD 140
+ + + + T ++ R S + L W ++
Sbjct: 784 TTDDLSNDALPFMGWADLTLADMPVRAYRISFSGELSYEIAVPASHGRALWDALLDAGAE 843
Query: 141 -------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ H +R G + + T+ P D M IS K Y+G+ R
Sbjct: 844 HGVTPYGTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLNMGW--AISKKKDDYLGKRAQER 900
Query: 194 IQHRNIIRKRPMII-TGTDDLPPSGSPILTDD 224
+ R + + + T + P G+
Sbjct: 901 SHMADPNRWKLVGLETLDGSVLPDGAYATAPG 932
>gi|188587345|ref|YP_001918890.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229807551|sp|B2A2T4|GCST_NATTJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|179352032|gb|ACB86302.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 365
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 67/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ +LQ ++ DV L + + G + FLI K++E+ F+
Sbjct: 52 SHMGEIIVEGPKALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFL 111
Query: 67 LEIDRS----------------------------------KRDSLIDKL--------LFY 84
L ++ + K + ++ +L F+
Sbjct: 112 LIVNAANTDKDFEWLQENNTEGVELKNLSDEYGQIAIQGPKAEKILQRLTDTPLKEIKFF 171
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD---- 140
+ +V ++GV ++ + F I + W E +
Sbjct: 172 NFKEDV-----DLDGVKALISRTGYTGENGF---EIYIKAEETAKLWEKIEDAGENDGLK 223
Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQH 196
+ LR + + P I P +A ++ + L K ++G++V+ +
Sbjct: 224 PIGLGARDVLRFEVCLPLYGNELSPE-ITPLEARLNPF--VKLNKTEDFLGKDVLVNQKE 280
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250
+ + R +P + ++ D EIG + L + +
Sbjct: 281 QGLERVLVGFEMIDRGIPRTNYILMKDGQEIGFVSSGSQSPTLDKALGLGFIKPEHDQEG 340
Query: 251 IKKGMALTVHGVRVKASFPHWYK 273
+ + + + K +Y+
Sbjct: 341 NEIEVKIRKKTAKAKIVKTPFYR 363
>gi|309780452|ref|ZP_07675201.1| glycine cleavage system T protein [Ralstonia sp. 5_7_47FAA]
gi|308920780|gb|EFP66428.1| glycine cleavage system T protein [Ralstonia sp. 5_7_47FAA]
Length = 375
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A S +L P+G ++ ++ ED F
Sbjct: 51 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWF 110
Query: 66 ILEIDRSKRDSLIDKL 81
L ++ + ++ +
Sbjct: 111 RLVVNAGTAPTDLEWI 126
>gi|148243536|ref|YP_001228693.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
RCC307]
gi|166221575|sp|A5GWT1|GCST_SYNR3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|147851846|emb|CAK29340.1| Glycine cleavage system T protein [Synechococcus sp. RCC307]
Length = 359
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 85/285 (29%), Gaps = 45/285 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G LQ ++ +D+ + A+ + +L G I ++ + +
Sbjct: 49 SHMGVLTLTGSGVKDKLQGLVPSDLQRIGPGEAQYTVLLNEAGGIRDDLIVYDRSDTEVV 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-------SNSSFIDER 119
+ I+ + DS + V + + GV+L+ S R
Sbjct: 109 VVINAACADSDTAWIKQQLEPQGVSVSDRKAGGVLLALQGPEAVGRLERLCGESLAGVPR 168
Query: 120 F------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRI 149
F + A L R + + LR+
Sbjct: 169 FGHRDLTIKGEPVFAARTGYTGEDGFELLLTASAGQSLWRQLLEDGVAPCGLGARDSLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ D +T P + + L + + ++G+E + R + RK +
Sbjct: 229 EAAMHLYGNDMDANTS-PLECGLGWLVHLEMPIE-FVGREALERQTAEGVSRKLVGLQLQ 286
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
+ P+L + +G + ALA R D
Sbjct: 287 GRAIARHDYPVLHNGEPVGVVTSGTFSPTLEHPVALASVRADLAK 331
>gi|148259070|ref|YP_001233197.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5]
gi|146400751|gb|ABQ29278.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5]
Length = 366
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 94/298 (31%), Gaps = 49/298 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L+ ++T D+ L R + ++ QG I+ +++ + D +L ++ +
Sbjct: 61 LEGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVANLG-DRLLLVLNAGR 119
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----RF--------- 120
++ + + + L + V + Q ++ E ++ E RF
Sbjct: 120 KNVDVAHIRAH-LPATVSLTPQFDRALLALQGPEAGAVMATLAPEVAAMRFMEAREMALS 178
Query: 121 -----------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
+ A+ L + + LR+ G+
Sbjct: 179 GISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSLRLEAGLPLYG 238
Query: 158 TDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP- 215
D T P A + G + G ++G + V R H R+R + + P
Sbjct: 239 NDI-DETRDPIAAGLGFAIGKTRKMGWDFLGGDAV-RAVHDAGPRERLVGLRAEGRAPVR 296
Query: 216 SGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+G+ + G + V G AL R D L + +
Sbjct: 297 AGAELRDAAGQPAGRVTSGTFGPSVNGPVALGYVRADCAGDGSTLIAGLRGRDIGITV 354
>gi|261250782|ref|ZP_05943356.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
orientalis CIP 102891]
gi|260937655|gb|EEX93643.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
orientalis CIP 102891]
Length = 372
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 111/310 (35%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL++++ D++ LP R + +G I+ +++ + +D
Sbjct: 54 SHMGQLRLHGEGAAAFLESLVPVDIIDLPKGNQRYAFFTNEEGGIMDDLMVANL-DDHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----SNSSFIDERF-- 120
+ ++ + ++ I+ L + L S V +EI ++ + N+ D F
Sbjct: 113 VVVNAACKEQDINHLEAH-LPSGVELEIIDDRALLALQGPKAVDVLKRFNAQVADMVFMD 171
Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
S A+ L + E + LR+
Sbjct: 172 VKKLNILGVECIVSRSGYTGEDGYEISVPNSHAEELAQKLTSEKEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + I +G + G +++ + ++ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKIRRTGGEREGGFPGADIILKQLETKDVSRKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + DD +IG + ++A R D + +
Sbjct: 292 LVGQTKAPVREGAELFDADDNKIGVVTSGTAGPNAGKPVSMAYVRADLAAIGTEVYADVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKKLAMTVEK 361
>gi|289678190|ref|ZP_06499080.1| glycine cleavage system T protein [Pseudomonas syringae pv.
syringae FF5]
Length = 226
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 55 SHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L ++ + +D + L + L + IE +L+ + + + + +
Sbjct: 115 LVVNAACKDQDLAHLCKH-LAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 173
>gi|291301849|ref|YP_003513127.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM
44728]
gi|290571069|gb|ADD44034.1| glycine cleavage system T protein [Stackebrandtia nassauensis DSM
44728]
Length = 369
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A F+ + ++ D+ + A+ + P G ++ + D
Sbjct: 57 SHLGKVDITGPGAADFVNSCLSNDLGKISPGKAQYTLCCDPAGGVVDDMIAYLYGPDRVF 116
Query: 67 LE----------------------------------IDRSKRDSLIDKLLFYKLRSNVII 92
L + K ++ L S +
Sbjct: 117 LVPNAANNAEVAARLAAAAPEGVTVTNQHTDYAVLAVQGPKSTEVLKALGLPTEHSYMSF 176
Query: 93 EIQPINGVVL-----SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
+ + G + + EH + + D +L ++ + A + L
Sbjct: 177 DEGHVGGATVIVCRTGYTGEHGYELVIPAAAAVAAWDEILTAGVAYDIRPAG-LGARDTL 235
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G + I P A + K + G+E ++ + R R +
Sbjct: 236 RTEMGYPLHGHELSLD-ITPVQARAGW--AVGWKKDAFWGKEPLAAEKAAGPAR-RLWGL 291
Query: 208 TGTD-DLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH-- 260
T +P + +L+ + +G K +A+A +D + +G L V
Sbjct: 292 EATGRGIPRADMNVLSGETVVGVTTSGTFSPTKKVGIALALLDTAAE-LAEGAELEVDVR 350
Query: 261 --GVRVKASFPH 270
+ VK P
Sbjct: 351 GRRLPVKVVKPP 362
>gi|225010727|ref|ZP_03701196.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-3C]
gi|225005098|gb|EEG43051.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-3C]
Length = 361
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 90/316 (28%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G +A LQ + + +V L A+ S G I+ ++ + + ++
Sbjct: 49 SHMGEFLVEGPNAFDLLQKVTSNEVANLKPGKAQYSCFPNETGGIVDDLIVYMLAPEKYL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L ++ S D + Y ++ +L+
Sbjct: 109 LVVNASNIDKDWAHINKYNESFKANLKNLSDAYSLLAIQGPKAVEAMQSLTSVSLADIPF 168
Query: 110 --FSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHE------------------ 146
F F I + G E K + + +
Sbjct: 169 YHFEVGPFAGIEHVIISATGYTGSGGFEIYCKNEEAAQLWDKVFEAGASFGIKPVGLAAR 228
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G +D T P +A + + +K ++ ++ + + RK
Sbjct: 229 DTLRLEMGYCLYGSDINDQTS-PLEAGLGWI--TKFSKD-FVNAASLATQKELGVQRKLV 284
Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+P PI+ D EIG + L +D + + +
Sbjct: 285 AFALEDRGIPRHDYPIVDIDGNEIGMVTSGTMSPSLGIGIGLGYVTLDHSKLDSEIFIQI 344
Query: 258 TVHGVRVKASFPHWYK 273
+ K +YK
Sbjct: 345 RKKALAAKVVKLPFYK 360
>gi|212691827|ref|ZP_03299955.1| hypothetical protein BACDOR_01322 [Bacteroides dorei DSM 17855]
gi|212665583|gb|EEB26155.1| hypothetical protein BACDOR_01322 [Bacteroides dorei DSM 17855]
Length = 361
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 60/307 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGLNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99
+ ++ KL V + P
Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169
Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146
+ ++ SN+ + + A + + +
Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G D T P +A + + K +I + ++ + + + RK
Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+P G ++ D +IG + K + + + A+ + + V G
Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347
Query: 262 VRVKASF 268
++KA
Sbjct: 348 RKLKAVI 354
>gi|254476339|ref|ZP_05089725.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp.
R11]
gi|214030582|gb|EEB71417.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp.
R11]
Length = 816
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 98/315 (31%), Gaps = 58/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G A FL I A+V ++P + +L +G I ++++ E +
Sbjct: 491 MSSFGKIRVEGPDAEKFLNYICGANV-SVPAGKIVYTQLLNSRGGIEADVTVTRLSETVY 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
++ R + ++ +K V+I ++ GV+
Sbjct: 550 LVVTPAVTRLADQTWMMRHKGDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 609
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE------------ 146
QE R + L + + +T +
Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLWEAGQDMGLKLCGMH 669
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D DA + ++ K +IG+ V + +
Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-VDAGLGF--AVATGKDDFIGKAAVLERKETG-PKA 725
Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIK 252
R + TD P PI+ D +G L A+ + + + +
Sbjct: 726 RMVQFKLTDPEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAADVLG 785
Query: 253 KGMALTVHGVRVKAS 267
+ V GV+V+A
Sbjct: 786 STYEIDVCGVKVQAE 800
>gi|254451139|ref|ZP_05064576.1| glycine cleavage T protein [Octadecabacter antarcticus 238]
gi|198265545|gb|EDY89815.1| glycine cleavage T protein [Octadecabacter antarcticus 238]
Length = 384
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 108/297 (36%), Gaps = 56/297 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69
+++ G A F Q + + D+ T + I G ++ ++ K+ ED F L I
Sbjct: 70 VEIKGPDAAKFTQYLCSRDLSTCKIGQCKYVLITDQDGGVINDPIVLKLAEDHFWLSIAD 129
Query: 70 ----------------DRSKRDSLIDKLL------FYKLRS---NVIIEIQPINGVVLSW 104
D + + L LR+ + E++ + + W
Sbjct: 130 TDVLLWARGLAVNAGMDVELSEPDVSPLQLQGPKSRDILRACFGDAPTELKYYHFMEYDW 189
Query: 105 NQ-----EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-----TYHELRINHGIV 154
+ T +S E F R W H I + T RI G++
Sbjct: 190 HGVPLIISRTGWSSELGYEIFLRDGSAGGRLWEHIMDIGVPMGLKPGHTSGIRRIEAGML 249
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ D + P + +D L + + ++G++ ++RI+ + +R+R + + + LP
Sbjct: 250 SYHADLTLAN-NPFELNLDRLVNLDMEAD-FVGKDALARIKEKG-VRQRLVGLE-IEGLP 305
Query: 215 PSGS-----PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
G+ P++ D ++GT+ V AL + ++ D G L V
Sbjct: 306 FVGTNDFFWPVMKDGTQVGTVTSAVYSPRLDKNIALGMLSVEHTD----IGTQLIVD 358
>gi|209966902|ref|YP_002299817.1| glycine cleavage system T protein [Rhodospirillum centenum SW]
gi|209960368|gb|ACJ01005.1| glycine cleavage system T protein [Rhodospirillum centenum SW]
Length = 384
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 56/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G L+A++ D+ L R + G IL +++++
Sbjct: 70 SHMGQVRLRGDDPAKALEALVPGDIQGLAEGRIRYTLFTNDHGGILDDLMVTRVGPGELF 129
Query: 67 LEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS------NSSFID 117
L ++ + + + + L R+ V +E + +L+ + ++
Sbjct: 130 LVVNAACKQADLAHL-----RAGLPGVAVEYLGDDAGLLALQGPAAAAVLARHVPAAAAM 184
Query: 118 E--------------RFSIADVLLHRTW-----------------GHNEKIASDIKTYHE 146
R S + + E +
Sbjct: 185 PFMSAITADIRGIPVRISRSGYTGEDGYEIGAAGTDAEALARLLLAEPEVAPIGLGARDS 244
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D T P +A + +G + G +V R +RKR
Sbjct: 245 LRLEAGLCLYGHDIDT-TTTPVEAALTWAVAKRRREEGGFPGAALVQRQFREGAVRKRVG 303
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALT 258
I+ + I D IG++ V G A+ A+ + L
Sbjct: 304 ILPEGRAPAREHTEIQGADGAVIGSITSGGFGPSVNGPVAMGYV--AAAHAAVGTPVNLM 361
Query: 259 VHGVRVKASF 268
V G + A
Sbjct: 362 VRGKALPAKV 371
>gi|238763229|ref|ZP_04624194.1| Aminomethyltransferase [Yersinia kristensenii ATCC 33638]
gi|238698502|gb|EEP91254.1| Aminomethyltransferase [Yersinia kristensenii ATCC 33638]
Length = 365
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTLPGKALYTAMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + R+ ++ + + V + ++ +V ++ + A
Sbjct: 110 RLVVNSATREKDLEWITQHAEPYQVGVTVRDDLALVAVQGPTAQQKVATLLTPEQQQA 167
>gi|57340020|gb|AAW49997.1| hypothetical protein FTT0407 [synthetic construct]
Length = 393
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 75 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 134
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 135 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIATEIEA 194
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 195 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 254
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 255 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYFAKKAQGVDTKWVGVVLKT 313
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 314 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 369
Query: 265 KASFPH 270
+ P
Sbjct: 370 ELVKPK 375
>gi|254885156|ref|ZP_05257866.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
4_3_47FAA]
gi|319641343|ref|ZP_07996038.1| aminomethyltransferase [Bacteroides sp. 3_1_40A]
gi|254837949|gb|EET18258.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
4_3_47FAA]
gi|317387024|gb|EFV67908.1| aminomethyltransferase [Bacteroides sp. 3_1_40A]
Length = 361
Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V TLP A+ + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGSNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99
+ ++ KL V + P
Sbjct: 116 IEKDWNWCVSHNTVGAELENASDRMAQLAIQGPKAMEVLQKLTP------VNLSEIPYYA 169
Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146
+ ++ SN+ + + A + + +
Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G D T P +A + + K + + ++ + + + RK
Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FTSRALLEKQKAEGLKRKLIAF 287
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+P G ++ D +IG + K + + + A+ + + V G
Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347
Query: 262 VRVKASF 268
++KA
Sbjct: 348 RKLKAVV 354
>gi|119775853|ref|YP_928593.1| glycine cleavage system aminomethyltransferase T [Shewanella
amazonensis SB2B]
gi|166221566|sp|A1S967|GCST_SHEAM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|119768353|gb|ABM00924.1| glycine cleavage system T protein [Shewanella amazonensis SB2B]
Length = 364
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 56/163 (34%), Gaps = 3/163 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ D+ L A +L G ++ + + + +
Sbjct: 50 SHMTVVDVEGADARAFLRKLLANDIAKLTVPGKALYGGMLNHDGGVIDDLITYYLSDTQY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V I +P ++ + + F E+ + +
Sbjct: 110 RVVVNSATREKDLAWIGEQAKGFDVTITERPELAMIAVQGPNAKAKAATVFTAEQNAAVE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166
+ + Y E + + + L +
Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEAGYEIIVPEAEAEALWQALL 212
>gi|254449174|ref|ZP_05062624.1| glycine cleavage system T protein [gamma proteobacterium HTCC5015]
gi|198261220|gb|EDY85515.1| glycine cleavage system T protein [gamma proteobacterium HTCC5015]
Length = 363
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 43/303 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL ++ D+ + A +A+L QG ++ +I +E+ F
Sbjct: 50 SHMTVVDLHGERVRDFLSYVMANDIAKVTKRGKALYTAMLNEQGGVIDDLIIYYLEDHFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + RD + L +V ++ + ++ + I E F
Sbjct: 110 RLVVNAATRDKDLAWLEQQAAAFSVEVKERSDLAMIAVQGPKAIEKALQLIPEEFRESVL 169
Query: 121 --------SIADVLLHRTWGHNE---------KIASDIK--------------TYHELRI 149
+A++ + RT E + A D LR+
Sbjct: 170 ALSKFEACEVAELFVARTGYTGEDGLEIILPNESAPDFWKALDKVGVAPIGLGARDSLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D + P + + + + +IG+ + + + + +K ++
Sbjct: 230 EAGMNLYGNDM-DESTTPLVSALGWTVAMKDERD-FIGRAALEQQKQAGVPQKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + D E+G L K ++ +ARI + ++ + + + R+
Sbjct: 288 GRGVMRAHQKVFVDGDEVGELTSGGFSPTLKNSIGLARIARDSASLGDTVEIEIRNKRIA 347
Query: 266 ASF 268
A
Sbjct: 348 ARI 350
>gi|56707556|ref|YP_169452.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670027|ref|YP_666584.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. tularensis FSC198]
gi|224456624|ref|ZP_03665097.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254370078|ref|ZP_04986084.1| glycine cleavage complex protein T [Francisella tularensis subsp.
tularensis FSC033]
gi|254874374|ref|ZP_05247084.1| aminomethyltransferase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|61213243|sp|Q5NHP0|GCST_FRATT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122971051|sp|Q14J42|GCST_FRAT1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54113579|gb|AAV29423.1| NT02FT1677 [synthetic construct]
gi|56604048|emb|CAG45040.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320360|emb|CAL08423.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. tularensis FSC198]
gi|151568322|gb|EDN33976.1| glycine cleavage complex protein T [Francisella tularensis subsp.
tularensis FSC033]
gi|254840373|gb|EET18809.1| aminomethyltransferase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158711|gb|ADA78102.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. tularensis NE061598]
Length = 358
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIATEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYFAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|254485519|ref|ZP_05098724.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
gi|214042388|gb|EEB83026.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
Length = 814
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 64/318 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A FL DV P + L + I ++++
Sbjct: 489 MSSFGKIRVEGRDATAFLNHIGGGQY--DV---PVGKIVYTQFLNNRAGIEADVTVTRLS 543
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104
E +++ + R + + ++ NV++ VL+
Sbjct: 544 EAAYLVVTPAATRLADQTWMRRHQGGFNVVLTDVTAGEAVLAVMGPNARKLMQAVSPNDF 603
Query: 105 ---------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146
QE R + L + + A +T+
Sbjct: 604 SNEVNPFGTAQEIELGLGLARVHRVTYVGELGWEVYVSTDMAAHAYETFMAAGQDMDLKL 663
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI G D +A + + K +IG++ V R +
Sbjct: 664 CGMHMMDCARIEKGFRHFGHDITSEDHV-LEAGLGF--AVKTDKPAFIGRDAVLRKKETG 720
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDKVDH 249
+ R+ +T + L P+L D +G L + + +
Sbjct: 721 LDRRLVQFKLTDPEPLLYHNEPVLRDGQIVGHLSSGAYGHHLGAAIGMGYVPCKGEAAAD 780
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + + G RV A
Sbjct: 781 VLASSYEIDIAGTRVTAE 798
>gi|89255887|ref|YP_513249.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. holarctica LVS]
gi|115314375|ref|YP_763098.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. holarctica OSU18]
gi|156501870|ref|YP_001427935.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167009652|ref|ZP_02274583.1| glycine cleavage system T protein [Francisella tularensis subsp.
holarctica FSC200]
gi|254367248|ref|ZP_04983276.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. holarctica 257]
gi|290953376|ref|ZP_06557997.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. holarctica URFT1]
gi|295313380|ref|ZP_06803988.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. holarctica URFT1]
gi|122325595|sp|Q0BN73|GCST_FRATO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122501109|sp|Q2A4V3|GCST_FRATH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221550|sp|A7NAH6|GCST_FRATF RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|89143718|emb|CAJ78917.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. holarctica LVS]
gi|115129274|gb|ABI82461.1| aminomethyltransferase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253066|gb|EBA52160.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. holarctica 257]
gi|156252473|gb|ABU60979.1| glycine cleavage system T protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 358
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|268591711|ref|ZP_06125932.1| glycine cleavage system T protein [Providencia rettgeri DSM 1131]
gi|291312671|gb|EFE53124.1| glycine cleavage system T protein [Providencia rettgeri DSM 1131]
Length = 364
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 102/309 (33%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ + +D +
Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDINKLTEQGKALYTGMLNASGGVIDDLIVYYLADDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI--------- 116
L ++ + RD + + + V I ++ ++ + S +
Sbjct: 110 RLVVNSATRDKDLAWIEQHAKGYAVEIRVRDDLALLAVQGPQAPEKVHSLLSAEQNSAIE 169
Query: 117 -----------DERFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRI 149
D + + + ++ +H+ LR+
Sbjct: 170 GMKPFYGVQAGDLFIATTGYTGEKGYEIAMPKEQVVEFWHKLLKAGVHPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D TI P A M +IG+E + +++ + K I+
Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALEKLREQGT-EKLVGIVMR 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ +G + D E+G L V +A+AR+ K + +
Sbjct: 288 EKGILRAGQVVRFTD-ELGKLQEGVITSGSFSPTLGFSIALARVPNGIQD-KAIVEIRQR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EMPVEVVKP 354
>gi|134302510|ref|YP_001122480.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. tularensis WY96-3418]
gi|254368725|ref|ZP_04984738.1| aminomethyltransferase [Francisella tularensis subsp. holarctica
FSC022]
gi|166221552|sp|A4IZK8|GCST_FRATW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134050287|gb|ABO47358.1| glycine cleavage system T protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|157121646|gb|EDO65816.1| aminomethyltransferase [Francisella tularensis subsp. holarctica
FSC022]
Length = 358
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|297183964|gb|ADI20084.1| glycine cleavage system t protein (aminomethyltransferase)
[uncultured alpha proteobacterium EB080_L06A09]
Length = 505
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 94/322 (29%), Gaps = 70/322 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I++ G+ A FL DV S L G I I+++
Sbjct: 180 MSSFGKIRIEGRDATKFLNFVAGGQY--DV---EIGKIVYSQFLNNAGGIEADVTITRLT 234
Query: 62 EDTFILEIDRSKRDSLIDKLLF----YKLRSNVIIEIQPINGVVL--------------- 102
E +++ + R + L + + VI ++ GV+
Sbjct: 235 ESAYLVVTPAATRLADQIWLSRNIGDFNV---VITDVTAGEGVLAIMGPSSRKLLQMVSP 291
Query: 103 ----------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------- 144
QE R + L + +++ T
Sbjct: 292 NSFDNDVNPFGTAQEIEIGMGLARVHRVTYVGELGWEVYVSSDQAGHIFDTLFDAGQDLD 351
Query: 145 ---------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
LRI G D +A + + +K +IG++ V R +
Sbjct: 352 MKLCGMHMMDSLRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKTSKPDFIGRDAVLRKK 408
Query: 196 HRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDK 246
+ R+ ++ ++ L PIL D +G L L + +
Sbjct: 409 ENGLDRRLLQFVLNDSEPLLYHNEPILRDGELVGHLTSGNYGHTIGAAIGLGYVPCKDET 468
Query: 247 VDHAIKKGMALTVHGVRVKASF 268
V + + V G ++KA
Sbjct: 469 VSDILASNYEIDVAGSKIKADV 490
>gi|187477000|ref|YP_785024.1| glycine cleavage system aminomethyltransferase T [Bordetella avium
197N]
gi|123514526|sp|Q2KYM2|GCST_BORA1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|115421586|emb|CAJ48096.1| glycine cleavage system T protein [Bordetella avium 197N]
Length = 366
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 14 VCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A FL+ ++ DV L A S +L PQG ++ +I D++ + ++
Sbjct: 60 ITGPDATAFLRYLVANDVARLNTPGKALYSCMLNPQGGVIDDLIIYYFAPDSWRVVVNAG 119
Query: 73 KRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH 128
+ + ++ + +V+I + ++ + ++ L
Sbjct: 120 TAEKDMAW--MARVAAAGNFDVVITPRRDLAMIAVQGPNARAKVWAARPAWQPASEGLGP 177
Query: 129 RTWGHNEK 136
T +
Sbjct: 178 FTAAILPE 185
>gi|308501188|ref|XP_003112779.1| hypothetical protein CRE_30811 [Caenorhabditis remanei]
gi|308267347|gb|EFP11300.1| hypothetical protein CRE_30811 [Caenorhabditis remanei]
Length = 403
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 56/311 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK + F++++ TADV L S +G I +I K ++D L +
Sbjct: 81 HITGKDRVAFIESLTTADVQGLQENSGTLSVFTNDKGGIKDDLIIMKTDKDFLFLVTNAG 140
Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQE-------------------- 107
D + L RS V IE G+V E
Sbjct: 141 CIDKDLPYLLENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTEIDLSKLTFMK 200
Query: 108 ------------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--SDIKTYHEL 147
+T + I + A+ L+ R + + L
Sbjct: 201 TIVGTVFGIEGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGKVKLAGLGARDAL 260
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPM 205
R+ G+ +D +T P +A + + + + G E +V +++ ++ ++R
Sbjct: 261 RLEAGLCLYGSDIDENTT-PIEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRRVG 319
Query: 206 IITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+I P S P++ D +G + A+A K +
Sbjct: 320 LIAPAGRCPRSHLPLIDPLDKCALGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIVDF 379
Query: 258 TVHGVRVKASF 268
V+
Sbjct: 380 GAKQAPVEVVK 390
>gi|123443589|ref|YP_001007562.1| glycine cleavage system aminomethyltransferase T [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|166221578|sp|A1JPN6|GCST_YERE8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122090550|emb|CAL13419.1| aminomethyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 365
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ ++ ++ + V + ++ +V
Sbjct: 110 RLVVNSATREKDLNWIIQHAEPYQVDVTVRDDLALVAVQGPTA 152
>gi|91225429|ref|ZP_01260551.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01]
gi|91189792|gb|EAS76065.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01]
Length = 372
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 54 SHMGQLRLIGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118
+ ++ + + I L + L S V +EI ++ + + F E
Sbjct: 113 VVVNAACKAQDIAHLQAH-LPSGVELEIIEDRALLAIQGPKAAAVLARFAPEVSEMLFMD 171
Query: 119 --------------RFSIADVLLHRTWGHNEK--------IASDIKTY------HELRIN 150
R + +K A D + LR+
Sbjct: 172 ICKVDVLGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTATTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G + D ++IG + ++ R D + +
Sbjct: 292 LVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTEVFAEVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKMLPMTVEK 361
>gi|312881451|ref|ZP_07741245.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370873|gb|EFP98331.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 372
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL++++ D++ LP R + QG I+ +++ + D
Sbjct: 54 SHMGQLRLHGAGAAAFLESLVPVDIIDLPSGNQRYAFFTNEQGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----------- 115
+ ++ + ++ I L + L V +E+ ++ + + F
Sbjct: 113 VVVNAACKEQDISHLQAH-LPQGVELEVIDDRALLALQGPKAVDVLARFNSSVAEMLFMD 171
Query: 116 -----------IDERFSIADVLLHRTWGHNEK--------IASDIKTY------HELRIN 150
I R + NEK A + + LR+
Sbjct: 172 VKKLEILGVECIVSRSGYTGEDGYEISVPNEKAEELADKLTAEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D +T +L+ + + G + G +++ +I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTAGERAGGFPGADIILEQIETKDVSRKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + ++ ++G + ++A R D + +
Sbjct: 292 LVGQTKAPVREGAELFDSEGSKVGIVTSGTAGPNAGKPVSMAYVRADLAAIGTELFADVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKQLPMTIEK 361
>gi|153836376|ref|ZP_01989043.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810]
gi|149750278|gb|EDM61023.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810]
Length = 376
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 105/310 (33%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 58 SHMGQLRLIGEGAATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------FSNSSFID 117
+ ++ + ++ I L + L S V +E+ ++ + ++ F+D
Sbjct: 117 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFASEVADMLFMD 175
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R A+ L + E + LR+
Sbjct: 176 IRKVEILGVECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 295
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G + D +IG + ++ R D + +
Sbjct: 296 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 355
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 356 GKMLPMTVEK 365
>gi|325275604|ref|ZP_08141506.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
gi|324099278|gb|EGB97222.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
Length = 374
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L+ ++ D++ LP + R + + G IL +++++ +D
Sbjct: 55 SHMGQICLRGVDAGKALERLVPVDIVDLPVGMQRYALFTSADGGILDDLMVARLADDELF 114
Query: 67 LEIDRSKRDSLIDKLLFY--------KLR-SNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
L ++ + ++ + L + L S ++ +Q + + +F
Sbjct: 115 LVVNAACKEQDLRHLQQHLEGLCEVESLFDSRALLALQGPAAARVLARLAPEVTGMTFMQ 174
Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I A +L E A + LR+
Sbjct: 175 FAPLRLLGVDCYVSRSGYTGEDGYEISVPVEAALMLARSLLAEPEVAAIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ D T P +A + G + G E + Q + KR
Sbjct: 235 AGLCLYGHDMETRTT-PIEASLAWAISKVRRADGERAGGFPGAEQIFAQQRDGVASKRVG 293
Query: 206 IITGTDDLPPSGS-PILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G+ + + IG + G A+ + ++ + +
Sbjct: 294 LLPKERVPVREGTLTVNAREEVIGRVTSGGFGPSLGGPLAMGYVQSEQAALDSEVFAQVR 353
Query: 259 VHGVRVKASF 268
V ++
Sbjct: 354 GKLVPMQVVR 363
>gi|282890247|ref|ZP_06298777.1| hypothetical protein pah_c014o129 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499904|gb|EFB42193.1| hypothetical protein pah_c014o129 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 347
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 51/293 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A L+++ T + A + + +G + ++ + F
Sbjct: 48 LSHMGRIDVEGADAEQLLESLSTNIISGKMNGSATYTVWINAEGGSVDDLIVYRQSPTQF 107
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFSNSSFIDER 119
+ ++ S RD + L + + V I + +G++ + H F ++S I
Sbjct: 108 FVIVNASNRDKDLKFLEDHAQKLRVEITPRYNDGILAIQGPQAPSMVSHLFPSASVIKPM 167
Query: 120 F----------SIADVLLHRTWGHNEKIASD-----IKTY---------------HELRI 149
I + G E +AS+ + Y LR+
Sbjct: 168 HFEELIYDGEQLILSATGYTGSGGFEILASEKIIKQLWHYFVDQEKIPPIGLGARDTLRL 227
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + TI P ++ ++ ++ K + ++ R R ++
Sbjct: 228 EMGYALYGHEL-SDTISPPES----VSAWTVKKALPV-------LEKRATKRYAYGVVLL 275
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKAL--AIARIDKVDHAIKKGMALTVH 260
+ G+ +L+ EIG + +L A+A I V+ + G + V
Sbjct: 276 EKGIAREGNEVLSAGEEIGYVTSGTYSPSLQKAVALI-LVNKKLTAGSLVEVQ 327
>gi|124024641|ref|YP_001018948.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9303]
gi|166221562|sp|A2CDX3|GCST_PROM3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123964927|gb|ABM79683.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9303]
Length = 374
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 102/305 (33%), Gaps = 50/305 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ G + LQA++ D+ + A + +L G IL ++ K +
Sbjct: 51 SHMGVLRLEGTNPKDTLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVVYDLGTNKQD 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSS 114
+ ++ I+ + ++ L + + + + NGV+L+ E S
Sbjct: 111 SQSLLIVINAACSETDTIWLKQHLQPAGIALSDAKNNGVLLALQGPQATKVLERLSGESL 170
Query: 115 FIDERFSIADVLLHRTWGHNE--------------------KIASDIKTYHELRINHGIV 154
RF V + + + + + +LR I
Sbjct: 171 ASLPRFGHRQVQFYGLGAEDPSSVFIARTGYTGEDGFELLLEAEAGRALWLQLRAEGVIP 230
Query: 155 D--PNTDFLPSTIFPHDALMDL-LNGISLTKGC-----------YIGQEVVSRIQHRNII 200
+ D L H D+ +N G ++G+ + + + I
Sbjct: 231 CGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAPFMGRTALEQQAEQGPI 290
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMA 256
R+ + + G P+L ++ ++G + +A+A+ + I +A
Sbjct: 291 RRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVA 350
Query: 257 LTVHG 261
+ + G
Sbjct: 351 VEIRG 355
>gi|330501304|ref|YP_004378173.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
mendocina NK-01]
gi|328915590|gb|AEB56421.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
mendocina NK-01]
Length = 360
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A +LQ ++ DV L A SA+L QG ++ ++ E +
Sbjct: 50 SHMCVVDLSGSQAQAYLQRLLANDVARLENPGKALYSAMLNEQGGVIDDLIVYLTEG-GY 108
Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV-IIEIQPINGVVL 102
L ++ RD + L + R+ V + Q ++
Sbjct: 109 RLVLNAGTRDKDLAWMHAQAGDFDVQLHERRDLAMLAIQGPKARARVSELLTQARAALIH 168
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149
+ R ++ S + LR+
Sbjct: 169 ELKPFQGLPEGDWFIARTGYTGEDGLEIVLPVTEVVSFLNDLVGAGISPIGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D + P A M +IG+ + + K ++
Sbjct: 229 EAGMNLYGQDM-DEQVSPLAANMAWTIAWEPVARDFIGRSALEAQRATGCPSKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVEGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVRPS 351
>gi|187931358|ref|YP_001891342.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. mediasiatica FSC147]
gi|238691542|sp|B2SFM1|GCST_FRATM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|187712267|gb|ACD30564.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 358
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ D+ L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDIAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|85059980|ref|YP_455682.1| glycine cleavage system aminomethyltransferase T [Sodalis
glossinidius str. 'morsitans']
gi|123518894|sp|Q2NRE8|GCST_SODGM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|84780500|dbj|BAE75277.1| aminomethyltransferase [Sodalis glossinidius str. 'morsitans']
Length = 366
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F
Sbjct: 50 SHMTIVDLAGPRTRDFLRHLLANDVAKLTVPGKALYTGMLNASGGVIDDLIVYFLSEIEF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ RD ++ + + V + ++ ++ +
Sbjct: 110 RLVVNSETRDKDVEWITRHAEPYQVTVTVRDDLALIAVQGPQA 152
>gi|146305371|ref|YP_001185836.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
mendocina ymp]
gi|145573572|gb|ABP83104.1| glycine cleavage system T protein [Pseudomonas mendocina ymp]
Length = 365
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 97/310 (31%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS----KIE 61
S+ + V G A FLQ ++ DV L A SA+L QG ++ ++ +
Sbjct: 50 SHMCVVDVTGSQAQAFLQRLLANDVARLDSAGKALYSAMLNEQGGVIDDLIVYLTGSSAQ 109
Query: 62 EDTFILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV-IIEIQPIN 98
E ++ L ++ RD + L + R+ V + Q
Sbjct: 110 EQSYRLVVNAGTRDKDLAWMHAQAGDFDVQLRERRDLAMLAIQGPKARARVAELLTQARA 169
Query: 99 GVVLSWNQEHTFSNSSFIDER------------FSIADV--LLHRTWGHNEKIASDIKTY 144
++ + + R +A+V LL+ G +
Sbjct: 170 ALIHELRPFQGLAEGDWFIARTGYTGEDGLEIVLPVAEVVPLLNELVGAGIAPIG-LGAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D ++ P A M +IG+ + + K
Sbjct: 229 DTLRLEAGMNLYGQDM-DESVSPLAANMAWTIAWEPAARAFIGRAALEAQRAAGCPSKLV 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
++ + + + + I G + K++A+AR+ + + +
Sbjct: 288 GLVLEERGVLRAHQVVRVEGIGEGEITSGSFSPTLNKSIALARVPTATGE-RAEVEIRGK 346
Query: 261 GVRVKASFPH 270
V+ P
Sbjct: 347 WYPVRVVRPS 356
>gi|305667590|ref|YP_003863877.1| aminomethyltransferase [Maribacter sp. HTCC2170]
gi|88709640|gb|EAR01873.1| aminomethyltransferase [Maribacter sp. HTCC2170]
Length = 361
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 103/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G +A+ +Q + + D L A+ S + G I+ ++ K++++T++
Sbjct: 49 SHMGEFLVEGPNALDLIQKVTSNDASKLTIGKAQYSCLPNETGGIIDDLIVYKVKDETYL 108
Query: 67 LEIDRSKRDSLIDKLLF---------------YKLRS----NVIIEIQPINGVVLSWNQE 107
L ++ S + + + Y L + + +Q I V LS +
Sbjct: 109 LVVNASNIEKDWNHISKYNNEFNAEMKNISEGYSLLAIQGPKAVEAMQSITSVDLSAIKF 168
Query: 108 HTFSNSSFIDERFSIADVLLH----------------RTWGHNEKIASD-------IKTY 144
+ F + F I + + W + +D +
Sbjct: 169 YNFVVADFAGLEHVIISATGYTGSGGFEIYCKNSEVKQVWDKIFEAGADFGIKPIGLAAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D T P +A + + TK ++ E +++ + RK
Sbjct: 229 DTLRLEMGYCLYGNDISDETS-PFEAGLGWI--TKFTKD-FVNSEALAKEKEHGAKRKLI 284
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+P G I+ IG + K + + + K+ + + + +
Sbjct: 285 AFELDDRGIPRQGYDIVDGQGKTIGEVTSGTMSPSLGKGIGLGYVPKIFTEVGSKINIQI 344
Query: 260 HGVRVKASF 268
V AS
Sbjct: 345 RKNAVPASV 353
>gi|83951701|ref|ZP_00960433.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
gi|83836707|gb|EAP76004.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
Length = 819
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 58/285 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A L ++ + IA + +L G+I L + ++ D F L
Sbjct: 501 VELSGPEAETLLDRLVANRLPRKTGGIA-LTHMLNAAGRIELETTVVRLASDRFYLVCAA 559
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERF 120
L+D L ++ ++V + ++ + L+ N + N++F
Sbjct: 560 FFEQRLLDHLDRHRGTADVTVTLRSNDWAALTLNGPRSRDILATCTDAPLDNAAFPWLTA 619
Query: 121 SIADVLLHRTWGHNEKIA------------SDIKTYHELRINHGIVDPNTDFLP------ 162
V HR W A + + Y L G D+
Sbjct: 620 QEITVAGHRLWAFRMSYAGELGWEFHMPRDAALAVYDAL-WAAGAPLGLADYGSFAMNAM 678
Query: 163 --------STIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ ++ + + + + YIG+E +R +
Sbjct: 679 RMEKGFKGAGELTNEVTLAEADVLRFARTDKAYIGREATL------APARRFVCAYLEIA 732
Query: 213 LPPS-----GSPILTDDIEIGTLGVVVGKK------ALAIARIDK 246
+ G +L +G+ V A A R +
Sbjct: 733 PDGAHDGHGGEAVLLQGKVVGSTASVAYGHSCGKILAFAYVRPEA 777
>gi|288922561|ref|ZP_06416741.1| glycine cleavage system T protein [Frankia sp. EUN1f]
gi|288346079|gb|EFC80428.1| glycine cleavage system T protein [Frankia sp. EUN1f]
Length = 371
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 88/300 (29%), Gaps = 55/300 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ F+ + +T D+ + A+ + G ++ + +D
Sbjct: 60 SHLGKARVRGAGAVDFVNSCLTNDLRRIGPGQAQYTLCCDETGGVVDDLIAYFYADDDVF 119
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE-----------HTFSNSS 114
L + + ++ +L S V + ++ GV+ + S
Sbjct: 120 LVPNAANTAEVVRRLAA-AAPSGVAVTDLHTDYGVLAVQGPASVQVLAALGLPADGAYMS 178
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HEL 147
F D + V++ R+ E + + L
Sbjct: 179 FADADWKGRPVVVCRSGYTGEIGFELLPRWEDAVLLWDEVLAAAAGVGGLACGLGARDTL 238
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G D +I P A + K + G+E + + R +
Sbjct: 239 RTEMGYPLHGQDLSL-SISPVQARSGW--AVGWDKPAFWGREALLAERAAGAARSLWGLR 295
Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ +P + E+G + LA+ D ++ G +TV
Sbjct: 296 SNDRGIPRPHMRVTGAGGAEVGEVTSGTFSPTLRQGIGLALL-----DRSVTAGDTVTVD 350
>gi|328470598|gb|EGF41509.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus 10329]
Length = 372
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 54 SHMGQLRLIGEGAATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118
+ ++ + ++ I L + L S V +E+ ++ + + F E
Sbjct: 113 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFAPEVTDMLFMD 171
Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 172 IRKVEILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G + D +IG + ++ R D + +
Sbjct: 292 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKMLPMTVEK 361
>gi|327405916|ref|YP_004346754.1| Aminomethyltransferase [Fluviicola taffensis DSM 16823]
gi|327321424|gb|AEA45916.1| Aminomethyltransferase [Fluviicola taffensis DSM 16823]
Length = 360
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ +Q + T D TL A+ S + +G ++ ++ +I+E+ ++
Sbjct: 49 SHMGEFLISGPDALDLIQRVTTNDASTLTIGRAQYSCLPNGKGGLVDDLIVYRIKEEEYL 108
Query: 67 LEIDRSKRD 75
L ++ S D
Sbjct: 109 LVVNASNID 117
>gi|238798649|ref|ZP_04642124.1| Aminomethyltransferase [Yersinia mollaretii ATCC 43969]
gi|238717535|gb|EEQ09376.1| Aminomethyltransferase [Yersinia mollaretii ATCC 43969]
Length = 365
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSGMLNASGGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ +V
Sbjct: 110 RLVVNSATRDKDLAWITQHAEPYQVDVTVRDDLALVAVQGPTA 152
>gi|260770118|ref|ZP_05879051.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
furnissii CIP 102972]
gi|260615456|gb|EEX40642.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
furnissii CIP 102972]
Length = 381
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 56/293 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A L+ ++ DV+ L R + QG IL +++ + D
Sbjct: 63 SHMGQLRLHGEGAAAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVANLG-DHLF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117
+ ++ + +D I+ L + L S V +EI ++ + ++ F+D
Sbjct: 122 VVVNAACKDQDINHLQAH-LPSGVELEIVDDRALLALQGPKAAEVLARLQPAVADMLFMD 180
Query: 118 -------------ERFSIADVLLHRT---WGHNEKIASDIKTYHE-----------LRIN 150
R + E +A + + E LR+
Sbjct: 181 IQQVQIDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSLRLE 240
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202
G+ D T P +A + G +G + G +++ S+I +++ RK
Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRTGGA--REGGFPGADIILSQIATKDVSRK 297
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVD 248
R ++ T G+ + D ++IG + ++A R D
Sbjct: 298 RVGLVGQTKAPVREGTELFDADGVKIGLVTSGTAGPTAGIPVSMAYVRADLAA 350
>gi|167041581|gb|ABZ06329.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_008G09]
Length = 468
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 82/280 (29%), Gaps = 63/280 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A F +IT D + R + +G +L ++ ++ +D F +
Sbjct: 116 IRVKGPDAEKFTDYVITRDAKKISPMRGRYVVLCNYKGGVLNDPVLMRVADDEFWFSLSD 175
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118
S + + K R V I+ V + + D+
Sbjct: 176 SDIGMYLQGVNADK-RYKVEIDEIDACPVQIQGPKAKALMQDLIGDQVDIDNIPFYGLAE 234
Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150
+ + + + N + A D+ H RI
Sbjct: 235 AKIGKRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 294
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG------CYIGQEVVSRIQHRNIIRKRP 204
GI+ D P + +S KG Y+G+E + +++ + ++P
Sbjct: 295 AGILSWGQDM-DQEHNPFQCNLGYQVSLS-GKGEWNKQEDYVGKEALEKMKEQLKNGEKP 352
Query: 205 MIITGTDDLPPSGSPI------------LTDDIEIGTLGV 232
+ L G PI + +G +
Sbjct: 353 YKLQLVG-LELGGKPIEEYAPDFWLISNKSGSKPVGYITS 391
>gi|265756182|ref|ZP_06090511.1| glycine cleavage system T protein [Bacteroides sp. 3_1_33FAA]
gi|263233773|gb|EEZ19382.1| glycine cleavage system T protein [Bacteroides sp. 3_1_33FAA]
Length = 361
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 60/307 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V TL A+ + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPNALEFLQQVTSNNVATLLVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSNVIIEIQPING 99
+ ++ KL V + P
Sbjct: 116 IEKDWNWCVSHNTVSAELENASDHMAQLAIQGPKAMEVLQKLTP------VDLSEIPYYA 169
Query: 100 VV---LSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIAS----DIKTYHE 146
+ ++ SN+ + + A + + +
Sbjct: 170 FTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G D T P +A + + K +I + ++ + + + RK
Sbjct: 230 LRLEMGFCLYGNDL-SDTTSPLEAGLGWITKFVEGKN-FISRALLEKQKAEGLKRKLIAF 287
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+P G ++ D +IG + K + + + A+ + + V G
Sbjct: 288 EMVDRGIPRHGYELVNADGEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRG 347
Query: 262 VRVKASF 268
++KA
Sbjct: 348 RKLKAVI 354
>gi|254712518|ref|ZP_05174329.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M644/93/1]
gi|254715590|ref|ZP_05177401.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M13/05/1]
gi|261217334|ref|ZP_05931615.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M13/05/1]
gi|261320207|ref|ZP_05959404.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M644/93/1]
gi|260922423|gb|EEX88991.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M13/05/1]
gi|261292897|gb|EEX96393.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M644/93/1]
Length = 367
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 37/261 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALLAK--TCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D P T L + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETDPVLAGLTWAITKAVREKAAFNGAKAVLDAIAKGASAKRVGLKPEGRQ 293
Query: 213 LPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 294 PVRAGADLFDESGRQIGTVTS 314
>gi|325115232|emb|CBZ50787.1| putative protein phosphatases pp1 regulatory subunit [Neospora
caninum Liverpool]
Length = 885
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG--HNEKIASDIKTYHELRINHGIV 154
++ ++ + ++++ ++ R + + L + + S + Y R G+
Sbjct: 298 VDVCGVTETEAGKNADAASLETRLAASSFLHAYSPSVLLASRGLSSPQLYELRRRALGVP 357
Query: 155 DPNTDFLPSTIFPHDALMDLLNGIS--LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ + MD I + KGC++GQEVV+R + R+R
Sbjct: 358 EGPAEVGIQRYLLQHLNMDWQAYIHPRVNKGCFLGQEVVTRALLQLSNRRRLASFVIVSR 417
Query: 213 LPPS 216
+
Sbjct: 418 AQEA 421
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 43 AILTPQGKILLYFLISKI------------------EEDTFILEIDRSKRDSLIDKLLFY 84
A+L QG++LL + + +ED F+L++D + D L L
Sbjct: 24 ALLNTQGRVLLDGHVVHLPRKEAGEASEAEDGLRVADEDAFLLDVDAAVGDRLFSFLQRR 83
Query: 85 KLRSNVIIE 93
+L S V ++
Sbjct: 84 RLSSRVEVK 92
>gi|254482917|ref|ZP_05096153.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2148]
gi|214036789|gb|EEB77460.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2148]
Length = 369
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 103/307 (33%), Gaps = 45/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G L++++ DV L + + QG +L +I++ +D F
Sbjct: 52 SHMGQVIIEGAGVAAMLESLVPVDVEGLGINCQTYALLTNDQGGVLDDLIITRWAQDKFF 111
Query: 67 LEIDRSKRDSLIDKLLFY------KLRSN-------------VIIEIQPINGVVLSWNQE 107
L ++ + ++ I L + K+ S+ V+ E+ P ++
Sbjct: 112 LVVNAACKEQDIAHLRSHLAGQSMKVLSDQALLALQGPKAREVMSELCPAAVELVFMQGC 171
Query: 108 HTFSN--------SSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ S + E ADVL R + + LR+ G
Sbjct: 172 AATIDGIEVYITCSGYTGEDGFEVSMPNGAADVLARRILDFEQVEPIGLGARDSLRLEAG 231
Query: 153 IV----DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMII 207
+ + NT+ P ++ G + G + + RI ++ +R+ + +
Sbjct: 232 LCLYGHELNTEIDPVQAGLLWSVSKSRRADGARAGGFPGSDTIFDRIINKPDLRRVGLTV 291
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261
G + + + + +G + G A+A + D + + +
Sbjct: 292 DGKRPVREGQTVLNANGEAVGEICSAAYGASLGGPIAMAYVQRQLGDPGTELAVDVRGKL 351
Query: 262 VRVKASF 268
+ V +
Sbjct: 352 LPVTVTK 358
>gi|153954399|ref|YP_001395164.1| hypothetical protein CKL_1774 [Clostridium kluyveri DSM 555]
gi|219854990|ref|YP_002472112.1| hypothetical protein CKR_1647 [Clostridium kluyveri NBRC 12016]
gi|146347280|gb|EDK33816.1| GcvT [Clostridium kluyveri DSM 555]
gi|219568714|dbj|BAH06698.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 362
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 36/69 (52%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G+ A+ L ++T + + AR S + +G ++ ++ K++++ ++
Sbjct: 51 SHMGEITCRGEDALKNLNHLLTNNFEGMYDGQARYSPMCNEKGGVVDDMIVYKVKDNDYL 110
Query: 67 LEIDRSKRD 75
+ ++ + +D
Sbjct: 111 IVVNAANKD 119
>gi|301168497|emb|CBW28087.1| putative aminomethyltransferase [Bacteriovorax marinus SJ]
Length = 359
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 102/303 (33%), Gaps = 50/303 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V GK A+ F+ IIT D + A S + G ++ + K+ + +
Sbjct: 51 SHMGEFFVTGKDAVAFVDYIITNDFAGAELEKAVYSPLCREDGTVIDDLIAYKLGSEKVL 110
Query: 67 LEIDRSKRD---------------SLIDKLLFYKL------RSNVIIE----IQPINGVV 101
+ ++ + + L++K Y L ++ +++ I + +V
Sbjct: 111 ICVNAANIEKDWSWISSHTQGFEIELVNKSNDYSLLAVQGPKAQEVLKSIEIINDSDELV 170
Query: 102 LSWNQEHTFSNSSFIDERFSIAD-------------VLLHRTWGHNEKIASDIKTYHELR 148
+E T N I R L + + + LR
Sbjct: 171 YYSAKELTRMNEQIIVARTGYTGEDGFEVFTSHEMAQTLWQKLLDAGATPCGLASRDVLR 230
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ + + P DA + + K +IG+E + + +KR + ++
Sbjct: 231 LEVCYPLYGHEL-NDELTPLDASLKWT--VKGAKEKFIGKEALEGA----VSKKRLVKLS 283
Query: 209 GTDDLPPSGSPILT-DDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G IL D IG + V K +A+ +D+ K + +
Sbjct: 284 LDKGIPREGYNILNMSDEVIGVVTSGTMSVELSKGIALGLVDRDKFPEDKKFKINIRKNN 343
Query: 264 VKA 266
++A
Sbjct: 344 IEA 346
>gi|118473206|ref|YP_888555.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
smegmatis str. MC2 155]
gi|118174493|gb|ABK75389.1| glycine cleavage system T protein [Mycobacterium smegmatis str. MC2
155]
Length = 365
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 44/307 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A ++ + +T D+ + A+ + T G ++ + + +D
Sbjct: 53 SHLGKALVKGPGAAAYVNSALTNDLGKIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 112
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + +++++L + RS ++ +Q V+ +
Sbjct: 113 LVPNAANTATVVEELQRHAPDGLTITNEHRSYAVLAVQGPKSAEVLDKLGLPTDMDYMGY 172
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYH-----------ELRINHGIVDP---NTDFL 161
D F V + RT E + + +R G
Sbjct: 173 ADAEFDGVFVRVCRTGYTGEHGYELLPAWDRAGVVFDALVAAVRAAGGEPAGLGARDTLR 232
Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+P H+ +D+ + K + G++ + + R +
Sbjct: 233 TEMGYPLHGHELSLDISPLQARCGWAVGWKKDAFWGRDALLAEKADGPKRVLRGLKALGR 292
Query: 212 DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GVR 263
+ + +L D +G K +A+A ID ++ I G +TV V
Sbjct: 293 GVLRADLAVLDGDTRVGVTTSGTFSPTLKVGIALALID-TEYDIADGTTVTVDVRGRAVE 351
Query: 264 VKASFPH 270
+ P
Sbjct: 352 CEVVKPP 358
>gi|118497104|ref|YP_898154.1| glycine cleavage system aminomethyltransferase T [Francisella
tularensis subsp. novicida U112]
gi|194323401|ref|ZP_03057178.1| glycine cleavage system T protein [Francisella tularensis subsp.
novicida FTE]
gi|208778897|ref|ZP_03246243.1| glycine cleavage system T protein [Francisella novicida FTG]
gi|166221551|sp|A0Q585|GCST_FRATN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|118423010|gb|ABK89400.1| glycine cleavage complex protein T (aminomethyltransferase)
[Francisella novicida U112]
gi|194322256|gb|EDX19737.1| glycine cleavage system T protein [Francisella tularensis subsp.
novicida FTE]
gi|208744697|gb|EDZ90995.1| glycine cleavage system T protein [Francisella novicida FTG]
Length = 358
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYGADMDISTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|284172775|ref|YP_003406157.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena
turkmenica DSM 5511]
gi|284017535|gb|ADB63484.1| glycine cleavage T protein (aminomethyl transferase) [Haloterrigena
turkmenica DSM 5511]
Length = 850
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/308 (16%), Positives = 96/308 (31%), Gaps = 59/308 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G+ A FLQ I + D+ + R S +L G IL +++++ED +++
Sbjct: 536 IMVEGEDAGDFLQRICSNDMD-VDTGRVRYSTMLNEGGTILADITVARLDEDEYMVTTGG 594
Query: 72 SKRDSLI-DKLLFYKLRSNVIIEIQPINGVVLS-WNQ----------EHTFSNSSF---- 115
+ L + V + ++ + W + SN F
Sbjct: 595 GNSPGIHGSWLQEHA-PDTVSVTVEESAKCTVGLWGPKSRLLLQRVTDADVSNDEFPYFS 653
Query: 116 -----------IDERFSIADVLLHRTWGHNE----------KIASDIK-------TYHEL 147
I R S L W +E + D+ +
Sbjct: 654 CKRLYVGDVPVIALRVSYVGELGWELWAPSEYGQKLWNTLWEAGQDLDVRAMGGGALESM 713
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMI 206
R+ G TD + P +A + + L +IG+E + + I +
Sbjct: 714 RLEKGFRLWGTDIDTD-VNPLEAGLPF--AVDLDTE-FIGKEALVEAKEEGIDTEVACLT 769
Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ + D+ G P+L D +G + V A + D + +
Sbjct: 770 LDDSTDVMLGGRPVLADGEAVGYVQAGDYGYSVGESIAYTYLPSEYADAGTS--VQIECE 827
Query: 261 GVRVKASF 268
G A+
Sbjct: 828 GETYDATV 835
>gi|325676916|ref|ZP_08156588.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707]
gi|325552216|gb|EGD21906.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707]
Length = 371
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 55/315 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A +TAD+ + A+ + T G ++ + + +D
Sbjct: 54 SHLGKALVAGAGAADFVNATLTADLGKIGPGQAQYTLCCTETGGVVDDLIAYYVADDEVF 113
Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NV-----------IIEIQPI 97
L + + ++ +L Y + + I I I
Sbjct: 114 LVPNAANTADVVARLQAAAPEGIEITDQHRDYAVFAVQGPKAGEVLAALDLRGDIAIADI 173
Query: 98 NGVVLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK---T 143
+ + + H T + R++ A+ L ++
Sbjct: 174 DYMGFADMDWHGVPVRVCRSGYTGERGFELLPRWADAEALFRALIDAVRAQGGEVAGLGA 233
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G + I P A I K + G++ ++ + R+
Sbjct: 234 RDTLRTEAGYPLHGHELSLD-ISPLQARCGW--AIGWAKPQFWGRDALTAEKAAGPARRM 290
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I + G + D IG K +A+A +D + G ++V
Sbjct: 291 WGIKALDRGVLRQGQTVSKDGASIGETTSGTFSPTLKVGIALALLDTASG-VAAGDEISV 349
Query: 260 H----GVRVKASFPH 270
+R + P
Sbjct: 350 DVRGRSLRCEVVTPP 364
>gi|256059091|ref|ZP_05449300.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae
5K33]
gi|261323039|ref|ZP_05962236.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae
5K33]
gi|261299019|gb|EEY02516.1| glycine cleavage system aminomethyltransferase T [Brucella neotomae
5K33]
Length = 367
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 HQPVRAGADLFDESGRQIGTVTS 314
>gi|239928800|ref|ZP_04685753.1| glycine cleavage system aminomethyltransferase T [Streptomyces
ghanaensis ATCC 14672]
gi|291437120|ref|ZP_06576510.1| glycine cleavage system aminomethyltransferase T [Streptomyces
ghanaensis ATCC 14672]
gi|291340015|gb|EFE66971.1| glycine cleavage system aminomethyltransferase T [Streptomyces
ghanaensis ATCC 14672]
Length = 375
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 58/310 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-- 62
LS+ I V G A FL A++ + ++ AR + I G IL ++ ++ E
Sbjct: 53 LSHMGEITVTGPQAAAFLDHALVGN-IGSVKPGRARYTMICREDGGILDDLIVYRLGEAE 111
Query: 63 -DTFILEIDRSKRDSLIDKL---------------LFYKLRS--------------NVII 92
+++ + S +++D L Y L + + +
Sbjct: 112 APEYLVVANASNAQTVLDALVERSAGFDAEVRDDRDAYALLAVQGPESPGILKGLTDADL 171
Query: 93 E-----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASD 140
E + + ++ F+ ++ L +
Sbjct: 172 EGLKYYSGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQALTEAGAGAGLVPCG 231
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199
+ LR+ G+ + ++ P DA + + K G ++G+ ++ R
Sbjct: 232 LSCRDTLRLEAGMPLYGNELST-SLTPFDAGFGRV--VKFEKEGDFVGRAALAEAAARTE 288
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI- 251
R ++ +P +G ++ IG + L A+A +D A
Sbjct: 289 QNPPRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAAPG 348
Query: 252 KKGMALTVHG 261
G+A+ + G
Sbjct: 349 TAGVAVDIRG 358
>gi|313501171|gb|ADR62537.1| GcvT_2 [Pseudomonas putida BIRD-1]
Length = 360
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E +
Sbjct: 50 SHMTVIDVDGTDATVWLQHLLANDVARLDDTGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + R ++D L + +V +++P ++ ++ + A
Sbjct: 109 RLVTNAATRAKVLDWLQSQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164
Query: 126 LLHRTWGHNEKIASDIK 142
L R E +A
Sbjct: 165 ALIRELRPFEGVADGDW 181
>gi|297202508|ref|ZP_06919905.1| glycine cleavage system T protein [Streptomyces sviceus ATCC 29083]
gi|197709965|gb|EDY53999.1| glycine cleavage system T protein [Streptomyces sviceus ATCC 29083]
Length = 372
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 54/294 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + ++ AR + I G IL ++ ++ E
Sbjct: 53 LSHMGEITVTGPQAAQLLNFALVGN-IASVGVGRARYTMICQADGGILDDLIVYRLGETE 111
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
+++ + S ++D L + + + ++ + +S D
Sbjct: 112 YMVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALIAVQGPQSPGILASLTDADLDGL 171
Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
+ L+ RT E K ++ +
Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGVGLVPCGLSC 231
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202
LR+ G+ + + P DA + + + K G ++G+E + R R
Sbjct: 232 RDTLRLEAGMPLYGHELSRE-LTPFDAGLGRV--VKFEKDGDFVGREALQRAAERAAAAP 288
Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249
+++ + +P +G ++ IG + + +A+A +D
Sbjct: 289 PRVLVGLVAEGRRVPRAGYAVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHA 342
>gi|254720300|ref|ZP_05182111.1| glycine cleavage system aminomethyltransferase T [Brucella sp.
83/13]
gi|265985318|ref|ZP_06098053.1| glycine cleavage system aminomethyltransferase T [Brucella sp.
83/13]
gi|306837396|ref|ZP_07470272.1| glycine cleavage system T protein [Brucella sp. NF 2653]
gi|264663910|gb|EEZ34171.1| glycine cleavage system aminomethyltransferase T [Brucella sp.
83/13]
gi|306407439|gb|EFM63642.1| glycine cleavage system T protein [Brucella sp. NF 2653]
Length = 367
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDHGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNESASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPASEARALAEKLLADDRVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|290770108|gb|ADD61869.1| putative protein [uncultured organism]
Length = 362
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + ++ L + + G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + + ++ I +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLTSINLSDLPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K + LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + ++ + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293
Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + + D IG + + R + + + + ++
Sbjct: 294 IPRHGYELYSTDGTAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|329936885|ref|ZP_08286564.1| glycine cleavage system aminomethyltransferase T [Streptomyces
griseoaurantiacus M045]
gi|329303810|gb|EGG47694.1| glycine cleavage system aminomethyltransferase T [Streptomyces
griseoaurantiacus M045]
Length = 378
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/310 (17%), Positives = 104/310 (33%), Gaps = 58/310 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---E 61
LS+ I V G A L A++ D+ TL AR + I G IL ++ ++ E
Sbjct: 56 LSHMGEITVTGPDAPALLNHALV-GDLATLAAGRARYTMICRADGGILDDLIVYRLADAE 114
Query: 62 EDTFILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + S +++D L V+ + + ++ +S +
Sbjct: 115 HPVYLVVANASNARTVLDALTERAAGFDAVVRDDRDAYALLAVQGPASPGILASLTEADL 174
Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
+ L+ RT E A K +
Sbjct: 175 DGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPADAEKLWQALTEAGASAGLVPCG 234
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG---QEVVSRIQH 196
LR+ G+ + + + P DA + + + K G ++G +
Sbjct: 235 LSCRDTLRLEAGMPLYGNELSTA-LTPFDAGLGRV--VKFGKEGDFVGREALAEAAERAE 291
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI- 251
+N R ++ +P +G P+L D IG + L A+A +D A
Sbjct: 292 QNPPRVLVGLVAEGRRVPRAGYPVLADGTVIGEVTSGAPSPTLGKPIAMAYVDAAHAAPG 351
Query: 252 KKGMALTVHG 261
G+A+ + G
Sbjct: 352 TAGVAVDIRG 361
>gi|156382105|ref|XP_001632395.1| predicted protein [Nematostella vectensis]
gi|156219450|gb|EDO40332.1| predicted protein [Nematostella vectensis]
Length = 873
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 85/274 (31%), Gaps = 66/274 (24%)
Query: 13 KVCGKSAIPFLQAIITADV---LTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+V GK FL DV +LP S +LTP+G++ +S + ED ++L
Sbjct: 543 EVTGKDTKIFL------DVMFANSLPKIGTTNISHLLTPRGRVYAEMTVSALGEDHYLLL 596
Query: 69 IDRSKRDSLIDKLLFYKLR--SNVIIE--IQPINGVVLSWNQEHT--------------- 109
+ L + +V E ++ + ++ +
Sbjct: 597 TGSGSEFHDLRWLKKHATEGGYDVTFENLTDKVDTLGVAGPKARDVLQKLTTEDMSHGKF 656
Query: 110 ---------FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------- 146
+ R S L + E +K Y+
Sbjct: 657 KFLNVKDIEMAGVPVRAIRISYTGELGWELYCSKEHT---LKLYNAIMEAGQEFGIDNFG 713
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNI 199
LR+ G + T P +A +D I KG +IG+E + + + +
Sbjct: 714 TFAMTTLRVEKGFRAWGLEMNLDTT-PLEAGLDFF--IKFDKGVNFIGREALLKQKEEGV 770
Query: 200 IRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGV 232
R+ M+ T D P G+ I +G
Sbjct: 771 KRRLCMLTVETTDTDPEGNESIWFGGKVVGNTTT 804
>gi|312140202|ref|YP_004007538.1| aminomethyltransferase [Rhodococcus equi 103S]
gi|311889541|emb|CBH48858.1| aminomethyltransferase [Rhodococcus equi 103S]
Length = 371
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 55/315 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A +TAD+ + A+ + T G ++ + + +D
Sbjct: 54 SHLGKALVAGAGAADFVNATLTADLGRIGPGQAQYTLCCTETGGVVDDLIAYYVADDEVF 113
Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NV-----------IIEIQPI 97
L + + ++ +L Y + + I I I
Sbjct: 114 LVPNAANTADVVARLQAGAPEGIEITDQHRDYAVFAVQGPKAGEVLAALDLRGDIAIADI 173
Query: 98 NGVVLSWNQEH-----------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK---T 143
+ + + H T + R++ A+ L ++
Sbjct: 174 DYMGFADMDWHGVPVRVCRSGYTGERGFELLPRWADAEALFRALIDAVRAQGGEVAGLGA 233
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G + I P A I K + G++ ++ + R+
Sbjct: 234 RDTLRTEAGYPLHGHELSLD-ISPLQARCGW--AIGWAKPQFWGRDALTAEKAAGPARRM 290
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
I + G + D IG K +A+A +D + G ++V
Sbjct: 291 WGIKALDRGVLRQGQTVSKDGASIGETTSGTFSPTLKVGIALALLDTASG-VAAGDEISV 349
Query: 260 H----GVRVKASFPH 270
+R + P
Sbjct: 350 DVRGRSLRCEVVTPP 364
>gi|255692813|ref|ZP_05416488.1| glycine cleavage system T protein [Bacteroides finegoldii DSM
17565]
gi|260621442|gb|EEX44313.1| glycine cleavage system T protein [Bacteroides finegoldii DSM
17565]
Length = 361
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 104/304 (34%), Gaps = 54/304 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71
V G A+ FLQ + + +V L + + +G I+ L+ + E + ++L ++
Sbjct: 56 VKGPKALAFLQKVTSNNVAVLTPGKIQYTCFPNDKGGIVDDLLVYQYEPEKYMLVVNAAN 115
Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ ++ D + ++ I+ +Q + + L+ +TF F
Sbjct: 116 IEKDWDWCVSHNTEGAELENASDHMAQLAVQGPKAILALQKLTDIDLASIPYYTFKVGKF 175
Query: 116 IDER--------------------FSIADVLLHRTWGHNEKI---ASDIKTYHELRINHG 152
E ++AD + + E+ + LR+ G
Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPNVADTIWKAVFEAGEEFDIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTD 211
D T P +A + + +G +I + ++ + + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWI--TKFIEGKEFINRPMLEKQKAEGVTRKLVGFEMVDR 292
Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P G ++ +D +IG + + + + + + + V G ++
Sbjct: 293 GIPRHGYELVNSDGEKIGIVTSGTMSPTRKIGIGMGYVKPEYSKAGTE--ICIDVRGRKL 350
Query: 265 KASF 268
KA
Sbjct: 351 KAVV 354
>gi|158422999|ref|YP_001524291.1| aminomethyltransferase [Azorhizobium caulinodans ORS 571]
gi|158329888|dbj|BAF87373.1| aminomethyltransferase [Azorhizobium caulinodans ORS 571]
Length = 789
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/315 (17%), Positives = 106/315 (33%), Gaps = 73/315 (23%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +++ G A FLQ ++ D+ L + + G ++ + ++ ++ F
Sbjct: 460 LSALRKLEIVGPDAETFLQGLLPRDIRKLSVGQIFYTPLCYAHGGMVDDGTLFRLGDNNF 519
Query: 66 -ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------HTFSNSS 114
+ D + + ++ + R V ++ ++ T
Sbjct: 520 RWIGGDDASLLWIEEQAAKFGGR--VSLKTASGEIHNVALQGPRSRETLRKILWTAPGRP 577
Query: 115 FIDE----RFSIA--------DVLLHRTWGHNE-------KIASDIKTYHEL-------- 147
+DE R +I VL+ RT E + + L
Sbjct: 578 TLDELGLFRLTIGRIGGYDGIPVLVSRTGYTGELGYEVFCHPKDAPQVWDALMEAGAEFG 637
Query: 148 ------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQEV 190
RI G+V DF ST P +A GI + YIG+
Sbjct: 638 IRPFGFEALDMVRIEAGLVFGGHDF-DSTTDPFEA------GIGFTVPTKKEEDYIGKAA 690
Query: 191 VSRIQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARID 245
+ R R + + + ++P G P+ ++G + + +A+AR+D
Sbjct: 691 LQR--RREHPAHKLVGLEVQGGEIPAHGDPLFIGRAQVGLVTSATRSPLLARTIALARVD 748
Query: 246 KVDHAIKKGMALTVH 260
V HA+ G+ L +
Sbjct: 749 -VAHAL-PGLTLEIG 761
>gi|320008451|gb|ADW03301.1| glycine cleavage system T protein [Streptomyces flavogriseus ATCC
33331]
Length = 371
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 56/296 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A++ + T+ AR + I+ G IL ++ ++ +
Sbjct: 52 LSHMGEITVTGPQAAAFLSYALVGN-IATVGEGRARYTMIVAEDGGILDDLIVYRLADTE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSNVI----------IEIQPING 99
F++ + ++D L Y L + V + ++G
Sbjct: 111 FMVVANAGNAQLVLDTLTTRAGGFDAEVRDDRDAYALLA-VQGPDSPAVLKSVTDADLDG 169
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIK 142
+ T + + R + E I +
Sbjct: 170 LKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWKALTEAGAPYGLIPCGLS 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII- 200
LR+ G+ + + + P DA + + + K G ++G+E +S R
Sbjct: 230 CRDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGREALSAAAERAETT 286
Query: 201 --RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
RK ++ +P +G P++ +G + L A+A +D A
Sbjct: 287 PPRKLVGLVAEGRRVPRAGYPVVAGGNVVGEVTSGAPSPTLGKPIAMAYVDAAYAA 342
>gi|311278174|ref|YP_003940405.1| glycine cleavage system T protein [Enterobacter cloacae SCF1]
gi|308747369|gb|ADO47121.1| glycine cleavage system T protein [Enterobacter cloacae SCF1]
Length = 364
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 98/308 (31%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKPGKALYSGMLNASGGVIDDLIVYFLTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + + I E + + + Q + F D + S +
Sbjct: 110 RLVVNSATREKDLAWITRHAEPYGIEIVERDDLALIAVQGPQAQAKAAMLFSDAQRSAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 170 GMKPFFGVQTGDLFVATTGYTGEAGYEIAMPNEKAADFWRALVEAGGQPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQHRNIIRKRPMII 207
G+ + +I P A M + +IG+EV R + M
Sbjct: 230 EAGMNLYGQEM-DESISPLAANMGWTIAWEPAERNFIGREVLETQRQHGTEQLVGLVMTE 288
Query: 208 TGT--DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
G +LP + + E GT +G ++A+AR+ + +
Sbjct: 289 KGVLRGELPVRFTDAQGNQKEGIITSGTFSPTLG-YSIALARV-PAGIGETAVVQIRNRE 346
Query: 262 VRVKASFP 269
+ VK + P
Sbjct: 347 MPVKVTKP 354
>gi|146284376|ref|YP_001174529.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
stutzeri A1501]
gi|145572581|gb|ABP81687.1| glycine-cleavage system protein T1 [Pseudomonas stutzeri A1501]
Length = 360
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 42/303 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A SA+L +G ++ ++ + +
Sbjct: 50 SHMTVVDVAGDQASAYLQHLLANDVARLKSPGRALYSAMLNERGGVIDDLIVYLT-DWGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ S RD + + V I +P ++ + + +
Sbjct: 109 RLVVNASTRDKDLAWMQAQAADFAVEINERPQLAMLAIQGPHARTRTAELVSQARATLIQ 168
Query: 120 -------FSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIV------------ 154
+ D + RT E A + + GI
Sbjct: 169 ELKPFQGLAEGDWFIGRTGYTGEDGLEIILPAEQAPDFLSELVGAGIPPIGLGARDTLRL 228
Query: 155 DPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + + + P A M + ++G+ + + + + K ++
Sbjct: 229 EAGLNLYGQDMTEEVSPLAANMGWTVAWEPAERDFVGRAALEQQRAEGDLPKLVGLVLEE 288
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ + + + + G + K++A+AR+ A + + + V+
Sbjct: 289 RGVLRAHQVVRVNGVGDGEITSGSFSPTLGKSIALARV-PAGTAERAEVEIRGKWYPVRV 347
Query: 267 SFP 269
P
Sbjct: 348 VQP 350
>gi|325961659|ref|YP_004239565.1| sarcosine oxidase subunit alpha family, heterotetrameric form
[Arthrobacter phenanthrenivorans Sphe3]
gi|323467746|gb|ADX71431.1| sarcosine oxidase, alpha subunit family, heterotetrameric form
[Arthrobacter phenanthrenivorans Sphe3]
Length = 981
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 89/282 (31%), Gaps = 64/282 (22%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I++ GK A FL I T L AR + TP G I + ++
Sbjct: 637 MDATTL---GKIEIRGKDAGEFLNRIYTNAFKKLAPGSARYGVMCTPDGMIFDDGVTLRL 693
Query: 61 EEDTFILEIDRSKRDSLIDKL-------------------------------LFYKLRSN 89
+E+T+ + ++D L L +
Sbjct: 694 DEETYFMTTTTGGAAKVLDWLEEWLQTEWPELDVHCTSVTEQWSTIAVVGPKSREVL-AK 752
Query: 90 VIIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGH 133
V E+ G+ ++ + S R S + L + TW
Sbjct: 753 VAPELAANGGLEAEAFPFMTFRETTLASGVRARVCRISFSGELAYEINVPSWYGLNTWEA 812
Query: 134 NEKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
++ +T H LR G D T+ P DA M+ + +S K +I
Sbjct: 813 VAAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FI 868
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226
G+ SR + RK + + D P GS ++
Sbjct: 869 GKRSYSRTDAQREDRKHLVSVLPVDGTLRLPEGSQLVEKGRS 910
>gi|284165331|ref|YP_003403610.1| glycine cleavage system protein T [Haloterrigena turkmenica DSM
5511]
gi|284014986|gb|ADB60937.1| glycine cleavage system T protein [Haloterrigena turkmenica DSM
5511]
Length = 374
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 61/319 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60
S+ I G A +Q + T DV L ++ +AI G I+ ++ ++
Sbjct: 51 SHMGQIHATGPDATELMQRLTTNDVTRLAVGDSQYAAITDEDGTIIDDTVVYRLPNETDD 110
Query: 61 -------EEDTFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHT 109
E T++ + +S ++ + ++ L + V + +
Sbjct: 111 GARADEDGEPTYLFVPNAGTDESTHERWITHRNEWDLEATVDNRTDEYAMFAVQGPEAAD 170
Query: 110 FSNSSFID-----ERFSI-------ADVLLHRT--------------------WGHNEKI 137
+ + + +RF D + RT W +
Sbjct: 171 LVDDATAESITALDRFEAQYATVDGVDCWVARTGYTGEDGFELIVPWSEAEHVWSLFDCQ 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ LRI G++ DF + P++A + + ++G++ ++ ++
Sbjct: 231 PCGLGARDTLRIEAGLLLAGQDFDHDSDPRTPYEAGIGFTVALETE---FVGRDALAELE 287
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVD 248
I K +P G I TD IGT+ L ++ +
Sbjct: 288 REGIEEKLVGFQLIDRGVPRHGYDITNTDSRVIGTVTSGTMSPSLEQPIGLGYVPVEYAE 347
Query: 249 HAIKKGMALTVHGVRVKAS 267
+ + + +
Sbjct: 348 PGTTLQVVVRGQSKKARVE 366
>gi|254690929|ref|ZP_05154183.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 6 str. 870]
gi|260756518|ref|ZP_05868866.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 6 str. 870]
gi|260676626|gb|EEX63447.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 6 str. 870]
Length = 367
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EKI +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKILADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|149196628|ref|ZP_01873682.1| Glycine cleavage system T protein [Lentisphaera araneosa HTCC2155]
gi|149140308|gb|EDM28707.1| Glycine cleavage system T protein [Lentisphaera araneosa HTCC2155]
Length = 358
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 41/272 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ +I+ ++ + + +L G + ++ K ED
Sbjct: 52 SHMGQFFVSGPDASRFVNYMISNNLDKIEGGRGLYTGLLYENGTFVDDIIVYKKAEDNIF 111
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI------ 116
+ ++ + D L +KL + ++ + + + Q N F
Sbjct: 112 MVVNAANVDKDFAWLSEKLKESNFDAQIVNRSDEYSLLAVQGPQAPEKLNQLFPGLYDQL 171
Query: 117 ------DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPS 163
D F+ L+ RT E K A + + L I G+ S
Sbjct: 172 KTFGHCDIGFAGESGLMCRTGYTGEVGVELIVKNAVAGELFDSL-IEIGVKACGLGSRDS 230
Query: 164 -------TIFPHDALMDLLNGI--------SLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+++ H+ D N + L K +IG+E + +I+ RK
Sbjct: 231 LRLEKGFSLYGHEIN-DQTNALEAGLGWVCDLNKVNFIGKEALEKIKAEGTSRKLIGFKA 289
Query: 209 GTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239
+P G +L ++ EIG + KAL
Sbjct: 290 NVRPIPRDGDTLLDSEGNEIGFVTSGTMSKAL 321
>gi|154251144|ref|YP_001411968.1| glycine cleavage system T protein [Parvibaculum lavamentivorans
DS-1]
gi|154155094|gb|ABS62311.1| glycine cleavage system T protein [Parvibaculum lavamentivorans
DS-1]
Length = 380
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 49/287 (17%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-FILEIDRSKRDSLIDKL--- 81
++ D+L L R + +L +G I ++++ +D L ++ + +D+ +
Sbjct: 82 LVPGDILGLEPLAIRYTLLLNDKGGIRDDLMVTRTAKDGMLFLVVNAACKDADFAHIAAN 141
Query: 82 -----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--------------------- 115
+L +I +Q + + F
Sbjct: 142 LPKGIELRRLEDRALIALQGPEAAAVFARLAPGAATQDFMTGVEMTVAGIPCLVSRSGYT 201
Query: 116 ------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
I A L + E + LR+ G+ D T P +
Sbjct: 202 GEDGYEISVPDGEAVALTKKLLAEPEVKPIGLGARDSLRLEAGLCLYGHDI-DETTTPVE 260
Query: 170 ALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDI 225
+ IS + G + G +++ + RKR ++ G+ I
Sbjct: 261 GALTWT--ISKRRREEGNFPGAKIILDQVANGVTRKRVGLLPEGKAPAREGTEITDKSGR 318
Query: 226 EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+IG + V G A+ + + G K
Sbjct: 319 KIGVVTSGGYGPSVGGPIAMGYVETSHAKSGTDIELMVRGKGRPAKV 365
>gi|306845754|ref|ZP_07478323.1| glycine cleavage system T protein [Brucella sp. BO1]
gi|306274075|gb|EFM55902.1| glycine cleavage system T protein [Brucella sp. BO1]
Length = 367
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTVLKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPVG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|186470753|ref|YP_001862071.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
gi|184197062|gb|ACC75025.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
Length = 370
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 45/264 (17%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
++V G A + +I DV + AR +A + +G + ++ F L
Sbjct: 57 IVRVSGPDAAAVIDSICAVDVSRMKPGTARLAAEVDERGGVCDDLMVIYDAPQHFRLSHG 116
Query: 71 RSKRDSLIDK----------------------------LLFY------KL--RSNVIIEI 94
SL+++ L + KL ++V ++
Sbjct: 117 GGTTQSLLERAAHKRNVEWRQDFDVHMLSLQGPRSTDILQPHIGIELNKLPYFAHVETQL 176
Query: 95 QPINGVVLSWN--QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
N +V E F S + ++ D +L H + + + RI
Sbjct: 177 FGRNIIVSRGGYSGEQGFEVSCAAADAVALWDGILDAGKPHG-AVPASWMSLEIARIEAA 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR-KRPMIITGT 210
++ D P + +D + + L K G Y+G+E + + R R K+ ++
Sbjct: 236 LLFYPFDMPEGDTTPWELNLDWM--VDLDKAGDYVGKE--ALLAARGKERVKQAGVVVRH 291
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV 234
D +GSPI D ++G + +
Sbjct: 292 DAAVSAGSPIYIGDEQVGVVTSAI 315
>gi|319407014|emb|CBI80651.1| glycine cleavage system T protein [Bartonella sp. 1-1C]
Length = 373
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 92/283 (32%), Gaps = 49/283 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A FL + D L +R + +L+ Q IL +++++++ F+
Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDAFLLQKGQSRYNYLLSEQAGILDDLILTRLDKYRFM 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------ 120
L ++ + +L R+ V + Q + + + + S F D
Sbjct: 122 LVVNAGNAQADFAELQK---RA-VDFDCQIVALERVFLALQGPQAASVFADAGLLGNELL 177
Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
S A L+ + + LR+
Sbjct: 178 FMQGFEPYQGWFVTRSGYTGEDGFEIALPESQARSLVEKLLDDYRVEWIGLAARDSLRLE 237
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D P T P +A + S+ K + G E R R R R +
Sbjct: 238 AGLCLHGNDITPDTT-PIEAALTWAVSKSVREKAKFYGAEAFLRAYQRGPSRCRVGLKPQ 296
Query: 210 TDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245
+G+ +L D +IG + G A+ ID
Sbjct: 297 GRQPVRAGAVLLDDKGKQIGIVTSGGFGPSFNGPVAMGYVPID 339
>gi|160889051|ref|ZP_02070054.1| hypothetical protein BACUNI_01471 [Bacteroides uniformis ATCC 8492]
gi|270293834|ref|ZP_06200036.1| glycine cleavage system T protein [Bacteroides sp. D20]
gi|317479329|ref|ZP_07938464.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36]
gi|156861518|gb|EDO54949.1| hypothetical protein BACUNI_01471 [Bacteroides uniformis ATCC 8492]
gi|270275301|gb|EFA21161.1| glycine cleavage system T protein [Bacteroides sp. D20]
gi|316904617|gb|EFV26436.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36]
Length = 362
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + ++ L + + G I+ L+ E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVYHYEPEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + + ++ I +Q + + LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLTSINLSDLPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E+ I + G E + +K + LR+ G
Sbjct: 176 AGEKDVIISNTGYTGAGGFELYFYPEAAMKIWDAVFEAGAEFGIKPVGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + ++ + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FTNRPMLEKQKAEGTTRKLVGFEMIDRG 293
Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + + D I IG + + R + + + + ++
Sbjct: 294 IPRHGYELYSTDGIAIGVVTSGTMSPTRKIGIGMGYIRPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|319405443|emb|CBI79062.1| glycine cleavage system T protein [Bartonella sp. AR 15-3]
Length = 373
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 41/279 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A FL + D L +R + +L Q IL ++++++E F+
Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDASLLQKGQSRYNYLLNEQAGILDDLILTRLDEYRFV 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--------VIIEIQPINGVVLSWN------------- 105
L ++ +L + V++ +Q + +
Sbjct: 122 LVVNAGNAQVDFSELKKRAVGFKCQIITLERVLLALQGPQAASVMADVGLPGNELLFMQG 181
Query: 106 ----QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIV 154
Q+ + S + E + ++ EK+ D + LR+ G+
Sbjct: 182 FEPHQDWFLTRSGYTGEDGFEIALPENQARSLVEKLLDDCRIEWVGLAARDSLRLEAGLC 241
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P T P +A + S+ K + G E R + R R +
Sbjct: 242 LHGNDITPDTT-PIEAGLTWAVSKSVREKAKFYGAEAFLRAYQKGPSRCRVGLKPQGRQP 300
Query: 214 PPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245
+G+ +L + +IG + G A+ ID
Sbjct: 301 VRAGAVLLDNKGTQIGIVTSGGFGPSFNGPVAMGYVPID 339
>gi|17988904|ref|NP_541537.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 1 str. 16M]
gi|225686498|ref|YP_002734470.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis ATCC 23457]
gi|256043607|ref|ZP_05446534.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 1 str. Rev.1]
gi|256111356|ref|ZP_05452382.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 3 str. Ether]
gi|256262362|ref|ZP_05464894.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|260564798|ref|ZP_05835283.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|265990025|ref|ZP_06102582.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 1 str. Rev.1]
gi|265992864|ref|ZP_06105421.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 3 str. Ether]
gi|17984732|gb|AAL53801.1| aminomethyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|225642603|gb|ACO02516.1| glycine cleavage system T protein [Brucella melitensis ATCC 23457]
gi|260152441|gb|EEW87534.1| glycine cleavage T protein [Brucella melitensis bv. 1 str. 16M]
gi|262763734|gb|EEZ09766.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 3 str. Ether]
gi|263000694|gb|EEZ13384.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis bv. 1 str. Rev.1]
gi|263092093|gb|EEZ16390.1| glycine cleavage T protein [Brucella melitensis bv. 2 str. 63/9]
gi|326410880|gb|ADZ67944.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis M28]
gi|326554171|gb|ADZ88810.1| glycine cleavage system aminomethyltransferase T [Brucella
melitensis M5-90]
Length = 367
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQSWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|21223829|ref|NP_629608.1| glycine cleavage system aminomethyltransferase T [Streptomyces
coelicolor A3(2)]
gi|256785076|ref|ZP_05523507.1| glycine cleavage system aminomethyltransferase T [Streptomyces
lividans TK24]
gi|289768969|ref|ZP_06528347.1| glycine cleavage system T protein [Streptomyces lividans TK24]
gi|11132177|sp|O86567|GCST_STRCO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|3402239|emb|CAA20175.1| aminomethyltransferase [Streptomyces coelicolor A3(2)]
gi|289699168|gb|EFD66597.1| glycine cleavage system T protein [Streptomyces lividans TK24]
Length = 372
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 97/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + T+ AR + I G IL ++ ++EE
Sbjct: 53 LSHMGEITVTGPQAAELLNFALVGN-IGTVKPGRARYTMICREDGGILDDLIVYRLEEAE 111
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100
+++ + S ++D L Y L + + ++G+
Sbjct: 112 YMVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALLAVQGPESPGILASLTDADLDGL 171
Query: 101 VLSWNQEHTFSNSSFIDERFSIAD--------------VLLHRTWGHNEK---IASDIKT 143
T + + R L G E I +
Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQALTGAGEAAGLIPCGLSC 231
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR- 201
LR+ G+ + + + P DA + + + K G ++G+ ++ R R
Sbjct: 232 RDTLRLEAGMPLYGNELSTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTEAAERAASRP 288
Query: 202 -KRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
+ + + +P SG ++ IG + + +A+A +D A
Sbjct: 289 PRVLVGLVAEGRRVPRSGYRVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDPAHAA 343
>gi|315182633|gb|ADT89546.1| glycine cleavage system T protein [Vibrio furnissii NCTC 11218]
Length = 381
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 103/293 (35%), Gaps = 56/293 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A L+ ++ DV+ L R + QG IL +++ + D
Sbjct: 63 SHMGQLRLHGEGAAAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVANLG-DHLF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------EHTFSNSSFID 117
+ ++ + +D I+ L + L S V +EI ++ + ++ F+D
Sbjct: 122 VVVNAACKDQDINHLQAH-LPSGVELEIIDDRALLALQGPKAAEVLARLQPAVADMLFMD 180
Query: 118 -------------ERFSIADVLLHRT---WGHNEKIASDIKTYHE-----------LRIN 150
R + E +A + + E LR+
Sbjct: 181 IQQVQIDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSLRLE 240
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202
G+ D T P +A + G +G + G +++ S+I +++ RK
Sbjct: 241 CGLCLYGHDL-DETTTPVEASLLWAIQPVRRTGGA--REGGFPGADIILSQIATKDVSRK 297
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVD 248
R ++ T G+ + D +IG + ++A R D
Sbjct: 298 RVGLVGQTKAPVREGTELFDADGAKIGLVTSGTAGPTAGVPVSMAYVRADLAA 350
>gi|149371410|ref|ZP_01890896.1| aminomethyltransferase [unidentified eubacterium SCB49]
gi|149355548|gb|EDM44107.1| aminomethyltransferase [unidentified eubacterium SCB49]
Length = 380
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 62/320 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G +A+ +Q + T D L A+ S G ++ +I ++ + ++
Sbjct: 68 SHMGEFLVTGPNALALIQHVTTNDASKLVDGQAQYSCFPNEDGGVVDDLIIYRLAAEKYL 127
Query: 67 LEIDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
L ++ S + + + +LR ++ ++ + + S E S
Sbjct: 128 LVVNASNIEKDWKHINKHNHVGAELR-----DLSEDYSLLAIQGPKAIEAMQSLTSEDLS 182
Query: 122 I----------------------------------ADVLLHRTWGHNEKIASD------- 140
+ + + W +D
Sbjct: 183 AIKFYTFKVSDFAGIDNVIISATGYTGSGGFEIYCKNEEVAQVWEKVLAAGADFGIKPIG 242
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ G D T P +A + + TK ++ E + + + +
Sbjct: 243 LAARDTLRLEMGYCLYGNDI-DDTTSPLEAGLGWI--TKFTKD-FVNSENLKKQKESGVE 298
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253
R +P G I+ D +IG + L + K
Sbjct: 299 RSLVAFELDERGIPRQGYDIVDNDGNKIGNVTSGTMSPSMGTGIGLGYVPVALKSVGSKI 358
Query: 254 GMALTVHGVRVKASFPHWYK 273
+ + V +YK
Sbjct: 359 NIQIRKKAVPATVVKLPFYK 378
>gi|148558325|ref|YP_001257682.1| glycine cleavage system aminomethyltransferase T [Brucella ovis
ATCC 25840]
gi|148369610|gb|ABQ62482.1| glycine cleavage system T protein [Brucella ovis ATCC 25840]
Length = 367
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + T LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLATRDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|288940652|ref|YP_003442892.1| glycine cleavage system T protein [Allochromatium vinosum DSM 180]
gi|288896024|gb|ADC61860.1| glycine cleavage system T protein [Allochromatium vinosum DSM 180]
Length = 364
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 100/303 (33%), Gaps = 48/303 (15%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS-KIEEDTFILEI 69
+ + G A FL+ ++ DV L A S +L G ++ ++ + + L +
Sbjct: 55 VDIEGPDAQAFLRRLLANDVAKLKTVGKALYSCMLNDSGGVVDDLIVYLRGPAGHYRLVV 114
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS-----FIDERFSIA- 123
+ D + L ++ +V I + ++ + ++ D +A
Sbjct: 115 NAGTADKDLTWLESHRTGFDVEIRRRDDLAMIAVQGPQARELTATCLPREMADSALELAP 174
Query: 124 -------DVLLHRTWGHNE-------KIASDIKTY----------------HELRINHGI 153
+ RT E + + LR+ G+
Sbjct: 175 FHATECGGWFIARTGYTGEDGFEILLPADHAVDLWSVLLDAGVRPCGLGARDTLRLEAGM 234
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D + P ++ ++ + +IG+ + ++ R+ ++ +
Sbjct: 235 NLYGQDMG-EDVGPLESGLEWTIAWEPVERDFIGRAALDELRASPERREFVGLLLTGRGV 293
Query: 214 PPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG--VRVKAS 267
+ +L++ E+G + ++++A+AR V + + + + G V +
Sbjct: 294 IRAHQTVLSNGREVGEITSGGFSPTLQRSIALAR---VAPGLGETCEVEIRGKPVPARIV 350
Query: 268 FPH 270
P
Sbjct: 351 KPP 353
>gi|148550301|ref|YP_001270403.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
putida F1]
gi|148514359|gb|ABQ81219.1| aminomethyltransferase [Pseudomonas putida F1]
Length = 360
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L QG ++ ++ + E +
Sbjct: 50 SHMTVIDVDGTDATVWLQRLLANDVARLDDTGKALYSPLLNEQGGVIDDLIVYRT-ETGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L + + R ++D L + +V +++P ++ ++ + A
Sbjct: 109 RLVNNAATRAKVLDWLQSQRAGFSVDFQVRPDLAILAIQGPRAREKVAALLSP----ARA 164
Query: 126 LLHRTWGHNEKIASDIK 142
L R E +A
Sbjct: 165 ALIRELRPFEGVADGDW 181
>gi|226944684|ref|YP_002799757.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
gi|226719611|gb|ACO78782.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
Length = 374
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 47/270 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L+ ++ D++ LP R + G IL +++ + ++
Sbjct: 55 SHMGQILLRGADAGAALETLVPVDIVELPVGQQRYALFTDDNGGILDDLMVANLGDERLF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
L ++ + ++ + L + S ++ +Q + V + + +F
Sbjct: 115 LVVNAACKEQDLAHLKTHIGARCQIESLFESRALLALQGLRAVDVLARLAPEVAQMTFMR 174
Query: 116 -------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I AD L E + LR+
Sbjct: 175 IAEIELLGIPCIVSRSGYTGEDGFEISVPVEHADKLARALLAEPEVQPIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ D +T P +A + G G + G + Q + +R
Sbjct: 235 AGLCLYGHDMSSATT-PVEASLLWAISKARREGGA--RAGGFPGAARIFAQQQEGVACRR 291
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ G+ I+ IG +
Sbjct: 292 VGLLPQERTPVREGTEIVDAQGAPIGKVTS 321
>gi|183983247|ref|YP_001851538.1| aminomethyltransferase GcvT [Mycobacterium marinum M]
gi|183176573|gb|ACC41683.1| aminomethyltransferase GcvT [Mycobacterium marinum M]
Length = 367
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 48/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIF 114
Query: 67 LEIDRSKRDSLIDK--------LLFYKL-RSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVAALQAAAPSGLTITDLHRSYAVLAVQGPRSTEVLAALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----RINHGIVDPNTD---------FL 161
D ++ V + RT E + + + + + +
Sbjct: 175 ADSSYNGVSVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVAEVGGEPAGLGARDTLR 234
Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRK--RPMIITG 209
+P H+ +D+ I K + G+E + + R+ R + + G
Sbjct: 235 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFFGREALLAEKAAG-PRRLLRGLRMVG 293
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH----G 261
L P G +L +G +A+A ID D ++ G +TV
Sbjct: 294 RGVLRP-GLTVLNGSTPVGVTTSGTFSPTLQIGIALALID-TDAGVEDGQQITVDVRGRA 351
Query: 262 VRVKASFPH 270
V + P
Sbjct: 352 VECEVVRPP 360
>gi|319408981|emb|CBI82640.1| glycine cleavage system T protein [Bartonella schoenbuchensis R1]
Length = 373
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 101/305 (33%), Gaps = 47/305 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FL + D L + +R + +L Q IL +++++E FI
Sbjct: 62 SHMKLIVVEGPQSAEFLSYALPVDAALLKERQSRYNYLLNEQAGILDDLILTRLENHRFI 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + + +L R+ V++ +Q + + + + F
Sbjct: 122 LVVNAGNAQADLAELKK---RATNFDCHVSALERVLLALQGPQAASVIADADLPGNELLF 178
Query: 116 IDERFSIADVLLHRTW-----------------GHNEKIASD-------IKTYHELRINH 151
+ D + R+ EK+ SD + LR+
Sbjct: 179 MQGFEPRKDWFVTRSGYTGEDGFEIALPEDQAHELAEKLLSDCRVEWIGLAARDSLRLEA 238
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D S I P +A + ++ K + G + + +R R + T
Sbjct: 239 GLCLHGNDIT-SDITPIEAALTWAVSKNVREKAAFYGAKAFLEAYEKGPLRCRVGLKPQT 297
Query: 211 DDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+G+ +L D +IG + G A+ +D + L +
Sbjct: 298 RQPVRAGAVLLDDKGNQIGVVTSGSFGPSFNGPVAMGYVPVDWKAEGTEVFTELRGKKIA 357
Query: 264 VKASF 268
+
Sbjct: 358 LSVHL 362
>gi|28900660|ref|NP_800315.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD
2210633]
gi|260365535|ref|ZP_05778072.1| aminomethyltransferase [Vibrio parahaemolyticus K5030]
gi|260877598|ref|ZP_05889953.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895389|ref|ZP_05903885.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260901661|ref|ZP_05910056.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037]
gi|28809040|dbj|BAC62148.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD
2210633]
gi|308085271|gb|EFO34966.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308090733|gb|EFO40428.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108852|gb|EFO46392.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308114318|gb|EFO51858.1| aminomethyltransferase [Vibrio parahaemolyticus K5030]
Length = 372
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 102/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 54 SHMGQLRLIGEGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118
+ ++ + ++ I L + L S V +E+ ++ + + F E
Sbjct: 113 VVVNAACKEQDIAHLKAH-LPSGVELEVIEDRALLAIQGPQAATVLARFAPEVADMLFMD 171
Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 172 IRKVEILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRVGGEREGGFPGADIILKQIETKDVARKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G + D +IG + ++ R D + +
Sbjct: 292 LVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKMLPMTVEK 361
>gi|212710027|ref|ZP_03318155.1| hypothetical protein PROVALCAL_01080 [Providencia alcalifaciens DSM
30120]
gi|212687234|gb|EEB46762.1| hypothetical protein PROVALCAL_01080 [Providencia alcalifaciens DSM
30120]
Length = 391
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 99/309 (32%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ +++D +
Sbjct: 77 SHMTIVDLHGEGCRDFLRYLLANDIAKLTIKGRALYTGMLNASGGVIDDLIVYYLDDDFY 136
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFSIA 123
L ++ + RD I + + V I ++ ++ + S + E R +I
Sbjct: 137 RLVVNSATRDKDIAWIEQHAKEYAVAITVRDDLALLAVQGPKAQDKVHSLLTEEQRAAIK 196
Query: 124 DVLL----------------------------------HRTWGHNEKIASDIKTYHELRI 149
D+ R + + LR+
Sbjct: 197 DMKPFYGVQTGDLFIATTGYTGEKGYEIAMPKQQVVEFWRKLLKAGVHPAGLGARDTLRL 256
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D +I P A M +IG+E + + + + + + I
Sbjct: 257 EAGMNLYGQDM-DESISPLAANMGWTIAWEPQDRNFIGREALEKQRAQGSDK--LVGIVM 313
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ ++ E G L V +A+AR+ + + +
Sbjct: 314 REKGILRAEQVVRFTDESGKLHEGVITSGSFSPTLGFSIALARV-PNGIKNQAIVEIRHR 372
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 373 EMPVEVVKP 381
>gi|330812480|ref|YP_004356942.1| glycine cleavage system T protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380588|gb|AEA71938.1| glycine cleavage system T protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 360
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A SA+L +G I+ +I ++ ED +
Sbjct: 50 SHMTVIDVAGPQAKVWLQRLLANDVDRLQDTGSALYSAMLNERGGIVDDMIIYRV-EDGY 108
Query: 66 ILEIDRSKRDSLIDKLL 82
L + S RD + +
Sbjct: 109 RLVFNASTRDQDLAWMQ 125
>gi|254449599|ref|ZP_05063036.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
238]
gi|198264005|gb|EDY88275.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
238]
Length = 812
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/320 (16%), Positives = 102/320 (31%), Gaps = 68/320 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A FL V ++P + L +G I ++++
Sbjct: 487 MSSFGKIRVEGRDAEAFL-----NYVGGGDYSVPIGKIVYTQFLNNRGGIEADVTVTRLS 541
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVL---------------- 102
E +++ + R L D++ + R + VI ++ GV+
Sbjct: 542 ETAYLVVTPAATR--LADQVWMERNRGDFNVVITDVTAGEGVLALMGPNARKLLQAVSPA 599
Query: 103 -SWNQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147
N + F + I+ R + L + ++ +T H+
Sbjct: 600 DFTNDVNPFGTAQDIEIGMGMARVHRVTYVGELGWEVYVSADQAGHVFETLHDAGKDFGL 659
Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
RI G D +A + + K +IG+E V Q
Sbjct: 660 TLCGMHMMDTCRIEKGFRHFGHDITCEDHV-LEAGLGF--AVKKDKPDFIGREAVLEKQE 716
Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKV 247
+ ++ +T + L PIL D +G L G L + +
Sbjct: 717 TGLNKRMVQFKLTDPEPLLYHNEPILRDGELVGYLSSGAYGHTLGGAMGLGYVPCKGETA 776
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ A+ V G V+A
Sbjct: 777 ADVLASSYAIDVMGTNVRAE 796
>gi|77461649|ref|YP_351156.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
fluorescens Pf0-1]
gi|77385652|gb|ABA77165.1| aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens Pf0-1]
Length = 360
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L +G I+ ++ ++ ED +
Sbjct: 50 SHMTVIDVTGPQAKAWLQHLLANDVERLHSPGRALYSTMLNERGGIVDDMIVYRL-EDGY 108
Query: 66 ILEIDRSKRDSLIDKLL 82
L ++ S RD + +
Sbjct: 109 RLVVNASTRDQDLAWMQ 125
>gi|85704027|ref|ZP_01035130.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
gi|85671347|gb|EAQ26205.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
Length = 815
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 99/319 (31%), Gaps = 66/319 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADV----LTLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ ++V G A FL V +++P + L +G I ++++
Sbjct: 490 MSSFGKLRVEGAGAEAFL-----NHVCGAEMSVPVGRIVYTQFLNAKGGIEADVTVTRLA 544
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSW---------------- 104
E +++ + R + L + V+I ++ GV+
Sbjct: 545 ETAYLVVTPAATRLADETWLRRHVGDHAVVITDVTAGEGVLAVMGPKARDLMRAVSPDDF 604
Query: 105 -NQEHTFSNSSFID--------ERFSIADVLLHRTWGHNEKIASDIKTYHEL-------- 147
N H F + I+ R S L + + + H
Sbjct: 605 SNAAHPFGQARVIEIGMGVARAHRVSYVGELGWEIYVSADMCGHVFEVLHAAGADHGLKL 664
Query: 148 ---------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI D +A + ++ K +IG++ V +
Sbjct: 665 CGMHAMDSCRIEKAFRHFGHDITCEDHV-LEAGLGF--AVATGKADFIGRDAVL-AKREA 720
Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIA--RIDKVD 248
+ +R + TD P P+L D +G L G + + + V+
Sbjct: 721 GLERRLVQFRLTDPEPMLYHNEPLLRDGEIVGYLSSGAYGHHLGGAMGMGYVPCKGESVE 780
Query: 249 HAIKKGMALTVHGVRVKAS 267
+ + V GVRVKA
Sbjct: 781 QVLASSYEVDVAGVRVKAE 799
>gi|302820605|ref|XP_002991969.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii]
gi|300140211|gb|EFJ06937.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii]
Length = 409
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 46/276 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK AIPFL+ ++ D+ L SA +G + +I+K++
Sbjct: 81 SLFDVSHMCGLTLKGKDAIPFLETLVVGDIAGLSDGSCTLSAFTNEKGGTIDDTVITKVK 140
Query: 62 EDTFILEIDRSKRDSLI----DKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ L ++ RD + L YK + V + ++ + +
Sbjct: 141 DGHVYLVVNAGCRDKDLAHIGKHLEAYKSKGKDVSSHVHDERSLLALQGPLAASTLQHLV 200
Query: 117 DERFSI-------------ADVLLHRTWGHNEK--------------------------I 137
E S A+ + RT E +
Sbjct: 201 KEDLSKVYFGNFRILSVNGAECFITRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIL 260
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ + LR+ G+ D +T + + +G ++G +V+ +
Sbjct: 261 LTGLGARDSLRLEAGLCLYGHDMDDNTSVVEAGVAWTIGKRRRAEGGFLGADVILKQLKE 320
Query: 198 NIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
+ RKR +I+ + PI D IG +
Sbjct: 321 GVSRKRVGMIS-EGAPARAHCPIYNASDEVIGEVTS 355
>gi|23500464|ref|NP_699904.1| glycine cleavage system aminomethyltransferase T [Brucella suis
1330]
gi|161620785|ref|YP_001594671.1| glycine cleavage system aminomethyltransferase T [Brucella canis
ATCC 23365]
gi|163844858|ref|YP_001622513.1| glycine cleavage system aminomethyltransferase T [Brucella suis
ATCC 23445]
gi|225629204|ref|ZP_03787237.1| glycine cleavage system T protein [Brucella ceti str. Cudo]
gi|254695763|ref|ZP_05157591.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 3 str. Tulya]
gi|254699946|ref|ZP_05161774.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
5 str. 513]
gi|254703068|ref|ZP_05164896.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
3 str. 686]
gi|254705788|ref|ZP_05167616.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M163/99/10]
gi|254711020|ref|ZP_05172831.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis B2/94]
gi|256015491|ref|YP_003105500.1| glycine cleavage system T protein [Brucella microti CCM 4915]
gi|256029402|ref|ZP_05443016.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M292/94/1]
gi|256157595|ref|ZP_05455513.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M490/95/1]
gi|256253430|ref|ZP_05458966.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
B1/94]
gi|256256114|ref|ZP_05461650.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 9 str. C68]
gi|260167509|ref|ZP_05754320.1| glycine cleavage system aminomethyltransferase T [Brucella sp.
F5/99]
gi|260568003|ref|ZP_05838472.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260882338|ref|ZP_05893952.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 9 str. C68]
gi|261216172|ref|ZP_05930453.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 3 str. Tulya]
gi|261220553|ref|ZP_05934834.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
B1/94]
gi|261313212|ref|ZP_05952409.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M163/99/10]
gi|261318605|ref|ZP_05957802.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis B2/94]
gi|261750424|ref|ZP_05994133.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
5 str. 513]
gi|261753682|ref|ZP_05997391.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
3 str. 686]
gi|261756924|ref|ZP_06000633.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|265986406|ref|ZP_06098963.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M292/94/1]
gi|265996100|ref|ZP_06108657.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M490/95/1]
gi|294853496|ref|ZP_06794168.1| glycine cleavage system T protein [Brucella sp. NVSL 07-0026]
gi|297249472|ref|ZP_06933173.1| glycine cleavage system T protein [Brucella abortus bv. 5 str.
B3196]
gi|23464091|gb|AAN33909.1| glycine cleavage system T protein [Brucella suis 1330]
gi|161337596|gb|ABX63900.1| glycine cleavage system T protein [Brucella canis ATCC 23365]
gi|163675581|gb|ABY39691.1| glycine cleavage system T protein [Brucella suis ATCC 23445]
gi|225615700|gb|EEH12749.1| glycine cleavage system T protein [Brucella ceti str. Cudo]
gi|255998151|gb|ACU49838.1| glycine cleavage system T protein [Brucella microti CCM 4915]
gi|260154668|gb|EEW89749.1| glycine cleavage T protein [Brucella suis bv. 4 str. 40]
gi|260871866|gb|EEX78935.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 9 str. C68]
gi|260917779|gb|EEX84640.1| glycine cleavage system aminomethyltransferase T [Brucella abortus
bv. 3 str. Tulya]
gi|260919137|gb|EEX85790.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
B1/94]
gi|261297828|gb|EEY01325.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis B2/94]
gi|261302238|gb|EEY05735.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M163/99/10]
gi|261736908|gb|EEY24904.1| glycine cleavage T protein [Brucella sp. F5/99]
gi|261740177|gb|EEY28103.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
5 str. 513]
gi|261743435|gb|EEY31361.1| glycine cleavage system aminomethyltransferase T [Brucella suis bv.
3 str. 686]
gi|262550397|gb|EEZ06558.1| glycine cleavage system aminomethyltransferase T [Brucella ceti
M490/95/1]
gi|264658603|gb|EEZ28864.1| glycine cleavage system aminomethyltransferase T [Brucella
pinnipedialis M292/94/1]
gi|294819151|gb|EFG36151.1| glycine cleavage system T protein [Brucella sp. NVSL 07-0026]
gi|297173341|gb|EFH32705.1| glycine cleavage system T protein [Brucella abortus bv. 5 str.
B3196]
Length = 367
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKTGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|170728295|ref|YP_001762321.1| glycine cleavage system aminomethyltransferase T [Shewanella woodyi
ATCC 51908]
gi|238688662|sp|B1KG89|GCST_SHEWM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169813642|gb|ACA88226.1| glycine cleavage system T protein [Shewanella woodyi ATCC 51908]
Length = 364
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 46/308 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVNGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLNDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
+ ++ + R+ + + +V+I +P ++ +S +
Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVITERPELAMIAVQGPNAKAKAASVFNTAQNAAVE 169
Query: 118 ---ERFSI-ADVLLHRTWGHNEKI--------ASDIKTY----------------HELRI 149
F + AD L T G+ + + + LR+
Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPDSEAEALWLALLEAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M + G+E ++ I+ + +I+
Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPADRNFNGREALAAIKAAGTEKMVGLIMEA 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHAIKKGMALTVHGV 262
+ P S +D + G + ++A+AR+ + A + + V
Sbjct: 289 KGVIRPGMSVFFSDSDGVEQQGTITSGTFSPTLGYSIAMARVPR-SIADTAEVEMRKKRV 347
Query: 263 RVKASFPH 270
VK P
Sbjct: 348 PVKVIAPS 355
>gi|254481375|ref|ZP_05094620.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214038538|gb|EEB79200.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 406
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 78/277 (28%), Gaps = 66/277 (23%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L ++T DV + + T GK++ + ++ ED F L
Sbjct: 76 RIKGPDAEAMLNRMVTRDVTSQAVDTVAYNIWCTDAGKLIDDGTLFRVSEDDFWL----C 131
Query: 73 KRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQEH----------------------- 108
D D L + N+ I + L+
Sbjct: 132 AADPNFDWLQLSAVGFPNLEITDISEDLASLALQGPTSCALLKAMGFSGIENATPFSIMR 191
Query: 109 -TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147
F R L + W A + +L
Sbjct: 192 FPFGAGEITISRTGYTGDLGYELWVD---PADAELLWDQLFSVGQVYGIQPLGEDSLEMA 248
Query: 148 RINHGIVDPNTDF--------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
RI G + P+ DF P + + + I+ KG + G+ +++ +
Sbjct: 249 RIEAGFLAPDVDFHGSLHTVDRGHDHSPLELALGWI--INFKKGHFSGRAALAKEKAAGK 306
Query: 200 IRKRPMIITGTDDLPPSGSPILTD---DIEIGTLGVV 233
+R + + + P S + D IG +
Sbjct: 307 -HRRLIKLDIEGNKPAENSILYCDKGCKKTIGYVTSA 342
>gi|218459268|ref|ZP_03499359.1| putative aminomethyltransferase (glycine cleavage) protein
[Rhizobium etli Kim 5]
Length = 31
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV 31
M +V+L ++S + V G A FLQ +IT D+
Sbjct: 1 MPAVFLKDRSLLSVGGADAQSFLQNLITTDI 31
>gi|194292398|ref|YP_002008305.1| sarcosine deshydrogenase [Cupriavidus taiwanensis LMG 19424]
gi|193226302|emb|CAQ72251.1| sarcosine deshydrogenase [Cupriavidus taiwanensis LMG 19424]
Length = 826
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 91/284 (32%), Gaps = 65/284 (22%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A LQ +++ DV +P +A+L +G ++++ +D +++ ++
Sbjct: 498 VKGADAEAVLQYVMSNDVA-VPPGQTVYTAMLNERGTYESDLTVTRLAQDQYLVVTGSAQ 556
Query: 74 RDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQ----------EHTFSNSSFI---- 116
+ + ++ VI+++ V+ FSN F
Sbjct: 557 TTRDFSYIER-LIPADQRCVIVDVTGQYAVLAVMGPRSRELLQRVSRADFSNEGFPFGSS 615
Query: 117 -----------DERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LR 148
R + L + E +T HE LR
Sbjct: 616 RKIDLGYATVRATRLTYVGELGWELYVPVEFAVGVYETLHEAGRTLGLVNAGYYAIESLR 675
Query: 149 INHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ G + P ++ P +A + L +G++ G++ + R++ +R
Sbjct: 676 LEKGYRAWGRELSP-SVNPFEAGLSFACKLASGMNFR-----GRDALLRLRQAGAPTRRM 729
Query: 205 MIITGTDDLPP---SGSPILTDD-----IEIGTLGVVVGKKALA 240
+++T G +L +G+L L
Sbjct: 730 VVVTVDGASDAMLWGGEAVLRTGPDGSVRAVGSLSSAAFGHTLG 773
>gi|83952345|ref|ZP_00961076.1| sarcosine oxidase, alpha subunit family protein [Roseovarius
nubinhibens ISM]
gi|83836018|gb|EAP75316.1| sarcosine oxidase, alpha subunit family protein [Roseovarius
nubinhibens ISM]
Length = 1003
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/324 (16%), Positives = 100/324 (30%), Gaps = 67/324 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + G ++ ++++I+EDTF+
Sbjct: 670 STLGKIIVKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCNENGFLMDDGVVARIDEDTFL 729
Query: 67 LEIDRSKRDSLIDKL-----------LFYKLRSNVI-----IEIQPING--VVLSWNQEH 108
+S+ + Y +NV I + V+ +E
Sbjct: 730 CHTTTGGAESIHGHMEDWLQCEWWDWKVY--TANVTEQYAQIAVVGPEARNVLAELTEED 787
Query: 109 --------------TFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
T R S + L W ++ + D+
Sbjct: 788 ISAETLPFMGWSDITLDGIPARAYRISFSGELSYEIAVAAGHGRALWDRLMEVGAKHDVM 847
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H +R G + + T+ P D M IS K Y+G+ R
Sbjct: 848 PYGTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLNMQW--AISKKKEDYLGKRAQERSHMA 904
Query: 198 NIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARID 245
+ R + + + T + P G+ + + V G + +A+ +
Sbjct: 905 DPTRWKLVGLETLDGSVLPDGAYATEEGVNENGQRKVQGRVTSTYYSPTLDRGIAMGLLR 964
Query: 246 KVDHAIKKGMAL-TVHGVRVKASF 268
+ + + V G V+A
Sbjct: 965 HGPDRMGEVIDFPKVDGTVVQARV 988
>gi|262384270|ref|ZP_06077405.1| glycine cleavage system T protein [Bacteroides sp. 2_1_33B]
gi|262293973|gb|EEY81906.1| glycine cleavage system T protein [Bacteroides sp. 2_1_33B]
Length = 361
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94
K ++ +L L S V E
Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175
Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152
V++S + ++ G E I S + LR+ G
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKSIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K + + + R + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G I + IG + + + + + + ++ +
Sbjct: 294 IPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353
Query: 266 ASFPH 270
Sbjct: 354 VVKAP 358
>gi|330874302|gb|EGH08451.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 320
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A L+A++ D++ LP + R + G IL +++ + D +
Sbjct: 72 SHMGQIRLTGTDAAKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLM 131
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L ++ + ++ + L + L + IE +L+ + + + + +
Sbjct: 132 LVVNAACKNQDLAHLRKH-LAGHCTIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFM 190
>gi|260460026|ref|ZP_05808279.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259034237|gb|EEW35495.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 825
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 90/307 (29%), Gaps = 56/307 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + V G+ A L I +V + + + +L +G + ++ + F+
Sbjct: 488 TSFAKLLVQGRDACAVLNRICAGNVD-VAVGTSVYTGVLNARGGYESDLTVMRLGAEKFL 546
Query: 67 LE----------------IDRSKRDSLIDKLLFYKL------RS-----NVIIEIQPING 99
+ I L D Y + RS + G
Sbjct: 547 IVTGSAQAVHDADWIVKNIPADAHAILTDVTSSYAVLALMGPRSRDLLGKLSSADLSNAG 606
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA---------------SDIKTY 144
+E ++ R + L E +D Y
Sbjct: 607 FPFGTIREIDIGYATAYANRMTYVGELGWELIVPTEFAVGVYEALHEAGREFGLADAGYY 666
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LRI G + P I P A + + G +IG++ + + + +
Sbjct: 667 ALDALRIEKGFRAWGRELTPD-IDPWQAGLGFAVAMD-KPGGFIGRDALIKSKPLAAPAR 724
Query: 203 RPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL----AIARIDK---VDHAIKK 253
R ++ T D P G IL D +G + L A+ I+ VD A
Sbjct: 725 RVVLFTLDDAEPMLWGGELILRDGKPVGEVRSAAYGHTLGRSVALGLIEHEAGVDAAFLS 784
Query: 254 GMALTVH 260
G +
Sbjct: 785 GERFEID 791
>gi|56478935|ref|YP_160524.1| glycine cleavage system aminomethyltransferase T [Aromatoleum
aromaticum EbN1]
gi|56314978|emb|CAI09623.1| Aminomethyltransferase of Glycine cleavage system [Aromatoleum
aromaticum EbN1]
Length = 360
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 23/164 (14%)
Query: 12 IKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G A +L+ ++ DV L A S +L P G ++ ++ ++ + ++
Sbjct: 55 LDLEGPDATTWLRGLLANDVAKLHEPGKALYSCMLNPDGGVIDDLIVYYFSPTSYRIVVN 114
Query: 71 RSKRDSLIDKLLFYKL----------RSNVI-IEIQPING---VVLSWNQEHTFSNSSFI 116
D + + + R ++ I +Q N + H S S
Sbjct: 115 AGTADKDVAWMRQHIAASGANVTLESRRDLAMIAVQGPNARDKTWAALPDTHAASESLKP 174
Query: 117 DERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGI 153
+ D+L+ RT E A ++ L G+
Sbjct: 175 FSAARVGDLLIARTGYTGEDGFEITLPAARAEAVWNALA-AAGV 217
>gi|21232308|ref|NP_638225.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66767559|ref|YP_242321.1| glycine cleavage system aminomethyltransferase T [Xanthomonas
campestris pv. campestris str. 8004]
gi|24636851|sp|Q8P6T8|GCST_XANCP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|81306461|sp|Q4UXC2|GCST_XANC8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|21114076|gb|AAM42149.1| glycine cleavage T protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572891|gb|AAY48301.1| glycine cleavage T protein [Xanthomonas campestris pv. campestris
str. 8004]
Length = 369
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 52/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A + +L PQG ++ ++ ++E+ F
Sbjct: 50 SHMTVVDLHGVRVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + RD + + R V ++ + ++ +D + A
Sbjct: 110 RLVVNAATRDKDLQWIGEQAARFEVRVKERADFAMIAVQGPNARSKVIDLLDPADASAAS 169
Query: 126 LLHRTWGHNEKI-------------------------ASDIKTYHELRINHGIVDPNT-- 158
L R + A + ++ L + HG+
Sbjct: 170 KLGRFAALQTRTRDGVALFLARTGYTGEDGFEIVLPQADAVAFWNAL-LAHGVAPAGLGA 228
Query: 159 --------------DFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
+ + P++A + I+L +G +IG+ V+ + + R+
Sbjct: 229 RDTLRLEAGMNLYGQDMDDNVTPYEAALAWT--ITLDEGRDFIGRSVLESQKAQGAPRQM 286
Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
++ + G +L+ E GT +G KA+A AR+ + +
Sbjct: 287 IGVVMDEKGVLRHGQKVLSAGGEGEILSGTFSPTLG-KAIAFARV-PAGSIDDLRVDIRG 344
Query: 260 HGVRVKASF 268
V ++A
Sbjct: 345 KQVPLRAVK 353
>gi|323354293|gb|EGA86136.1| Iba57p [Saccharomyces cerevisiae VL3]
Length = 380
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|207343780|gb|EDZ71136.1| YJR122Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 245
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 61/167 (36%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA---------DVLTLPYKI------------------ 38
L N+++I++ G + FL ++T+ ++ T+
Sbjct: 50 LENRTYIRIRGPDTVKFLNGLVTSKLLPHFIKKNLTTVEENEVPTEEGTTKVDPIIPVPE 109
Query: 39 ------------------------ARGSAILTPQGKILLYFLISKIEE---------DTF 65
SA L +GK++ +I +
Sbjct: 110 FDARLGNWGLYNEKGIQGPYISRFGLYSAFLNGKGKLITDTIIYPTPVTVSEQISNYPEY 169
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+LE+ + D ++ L +KL + + E + + +W+ E F N
Sbjct: 170 LLELHGNVVDKILHVLQTHKLANKIKFEKID-HSSLKTWDVEVQFPN 215
>gi|256842014|ref|ZP_05547519.1| glycine cleavage system T protein [Parabacteroides sp. D13]
gi|256736330|gb|EEU49659.1| glycine cleavage system T protein [Parabacteroides sp. D13]
Length = 361
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94
K ++ +L L S V E
Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175
Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152
V++S + ++ G E I S + LR+ G
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKSIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K + + + R + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G I ++ IG + + + + + + ++ +
Sbjct: 294 IPRHGYEIADAEENVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353
Query: 266 ASFPH 270
Sbjct: 354 VVKAP 358
>gi|225570253|ref|ZP_03779278.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM
15053]
gi|225161048|gb|EEG73667.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM
15053]
Length = 362
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 33/69 (47%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G+ A+ LQ ++T + + AR S + +G + ++ K +D +
Sbjct: 51 SHMGEILCEGRDALDNLQMLLTNNFANMSDGQARYSPMCNEKGGTVDDLIVYKEADDRYF 110
Query: 67 LEIDRSKRD 75
+ ++ + +D
Sbjct: 111 IVVNAANKD 119
>gi|194366845|ref|YP_002029455.1| glycine cleavage system aminomethyltransferase T [Stenotrophomonas
maltophilia R551-3]
gi|238693494|sp|B4SSE0|GCST_STRM5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|194349649|gb|ACF52772.1| glycine cleavage system T protein [Stenotrophomonas maltophilia
R551-3]
Length = 370
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 1/142 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F
Sbjct: 50 SHMTVVDLRGDQVKPFLRRLLANSVDKLKVTGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ S R+ + L V +E +P ++ + E A
Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVTVEQRPDLAILAVQGPQARDIVIGLAREADRAALT 169
Query: 126 LLHRTWGHNEKIASDIKTYHEL 147
L R + I+ +
Sbjct: 170 KLGRFAALQAQSDDGIELFVAR 191
>gi|258543779|ref|ZP_05704013.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC
15826]
gi|258521015|gb|EEV89874.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC
15826]
Length = 367
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 57/311 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G L+ ++ D+ L R + ++ QG I ++++ ED F
Sbjct: 53 SHMGQVLVHGADVAASLERLLPVDLQGLAVGQQRYALLMNAQGGIDDDLMLTRRAED-FY 111
Query: 67 LEIDRSKRDSLIDKLLF---------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
+ ++ + +D+ KL ++ RS ++ +Q V + E + +F
Sbjct: 112 VVVNAACKDADFAKLRAGLPDCEVSWWQARS--LLALQGPEAVEVLAAIEPAVRDLTFMH 169
Query: 116 ----------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
D+R ++ LL + + L
Sbjct: 170 GGEFTLLGIPCWVSRSGYTGEDGYEISVPDDRAAVLADLLCKDPRVKP---VGLGARDSL 226
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNIIRKR 203
R+ G+ D +T +L+ + + G Y G +VV RKR
Sbjct: 227 RLEAGLCLYGNDIDATTTPIEASLIWAIQKVRRPGGERAGGYPGADVVGEQIENGAPRKR 286
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMAL 257
+ + + + ++G + G +A+ + A+ +
Sbjct: 287 VGLAIDGRAPVRAHTELYLGAEKVGEVTS--GGFGATLNAPIAMGYVQAAHAAVGTKLVA 344
Query: 258 TVHGVRVKASF 268
V G V
Sbjct: 345 KVRGKDVAVEV 355
>gi|229589816|ref|YP_002871935.1| putative aminomethyltransferase-like protein [Pseudomonas
fluorescens SBW25]
gi|229361682|emb|CAY48563.1| putative aminomethyltransferase-like protein [Pseudomonas
fluorescens SBW25]
Length = 770
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 58/303 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A LQ +T DV L SA+ G +L + ++ D F
Sbjct: 447 EIIGPDAEALLQYCLTRDVRRLAVGQVVYSAMCHAHGGMLDDGTLLRLGPDNFRWICGED 506
Query: 73 KR----DSLIDKLLFYKLRSN---VIIEIQPING--------------------VVLSW- 104
KL K+ I + G L W
Sbjct: 507 YAGVWLREQAQKLGM-KVWVKSASEQIHNLAVQGPLSRELLKQMVWTPPTQPSVETLGWF 565
Query: 105 ----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
+ F + R L W E + ++
Sbjct: 566 RFLVGRLDGFDGCPLMISRTGYTGELGFEVWCQPEDAVQVWDRIWQLGQPLGLVPLGLEA 625
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G++ +F T P +A + + +IG++ + R +
Sbjct: 626 LDLLRIEAGLIFAGYEFSDQTD-PFEAGIGFSVPLKSKTDDFIGRDALLRRSAHPSHKLV 684
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259
+ ++G +++ G P+ ++G + L A+ R+D + G L +
Sbjct: 685 GLHLSG-NEVAHHGDPVYQGRAQVGVITSACRSPLLASNIALCRVD--VSCAEPGTELEI 741
Query: 260 HGV 262
V
Sbjct: 742 GKV 744
>gi|300021622|ref|YP_003754233.1| glycine cleavage system protein T [Hyphomicrobium denitrificans
ATCC 51888]
gi|299523443|gb|ADJ21912.1| glycine cleavage T protein (aminomethyl transferase)
[Hyphomicrobium denitrificans ATCC 51888]
Length = 372
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 80/268 (29%), Gaps = 48/268 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + V G A FL ++T D+ + S I+ G ++ L+ D F
Sbjct: 54 SGLRLVNVSGPDAQAFLNHLLTTDISKTKAGDSHISNIVNANGGLIDDVLVYVDGPDQFR 113
Query: 67 L--------EIDRSKRDSLIDKLLFYKLRSNVII---------------EIQPINGVVLS 103
+ E + + K+ +V I + G+
Sbjct: 114 VSHGGGSFEEAAEAAKGGFNVKVERDN---DVHILSLQGPLALETLAPHTPMDLAGLGYF 170
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTW----------------GHNEKIASDIKT-YHE 146
+Q+ T S R + + + G + I +
Sbjct: 171 RHQKSTLFGKSVSLARGGYSAERGYEVFCSAADAPFIWDSILKAGKDAGIVPASWSCLDI 230
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+R+ G++ D P + D I L+K ++G++ ++ + R
Sbjct: 231 IRVEGGLLFFPFDMTNEDTTPWEVRADWT--IDLSKPAFVGKDALA--AKKGKERSFIAG 286
Query: 207 ITGTDDLP-PSGSPILTDDIEIGTLGVV 233
+ GS I + ++G +
Sbjct: 287 VEVEAAKAIEPGSKITANGEQVGVVCSS 314
>gi|170742018|ref|YP_001770673.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46]
gi|168196292|gb|ACA18239.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46]
Length = 843
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 96/302 (31%), Gaps = 54/302 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G A L I D+ +P + L +G I +++ E F
Sbjct: 486 LSSFAKFVLDGADAEAALNRICANDIA-IPVGQVVYTPWLNERGGIEADVTVTRESETRF 544
Query: 66 ILEIDRSKRDSLIDKLLF-----------YKLRSNVIIEI-QPINGVVLSWNQEHTFSNS 113
++ + + L + ++ I P + +LS + SN+
Sbjct: 545 LIVTAAATQARDFAWLTRNIPAEARATALDVTSAQAVLGIMGPRSRELLSLLTDADLSNA 604
Query: 114 SFI---------------DERFSIADVLLHRTWGHNE--------------KIASDIKTY 144
+F R + L + E + + Y
Sbjct: 605 AFPFGTSRVVDLAYARVRASRITYVGELGWELFIPTEFAQGVFDALMAAGRDLGLRLAGY 664
Query: 145 HE---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200
H LR+ G D P ++ + ++ K G +IG+E + R + ++
Sbjct: 665 HALNSLRMEKGYRHWGHDITDEDT-PLESGLSF--AVAWDKNGGFIGREALLR-RRDHVP 720
Query: 201 RKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258
+R + I L PIL D IG + G + R + + G ALT
Sbjct: 721 SRRLVGIALESPDHLLYHNEPILRDGRIIGRVTS--GMFGHTVGRALGLGYVATNGQALT 778
Query: 259 VH 260
Sbjct: 779 AD 780
>gi|87300553|ref|ZP_01083395.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. WH 5701]
gi|87284424|gb|EAQ76376.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. WH 5701]
Length = 378
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 61/311 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61
S+ +++ G A LQA++ +D+ + A + +L G I ++ +
Sbjct: 53 SHMGVLRLRGDGAKDALQALVPSDLFRIGPGEATYTVLLNEAGGIRDDLIVYDLGRPEDD 112
Query: 62 ---EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117
D +L I+ ++ L S ++I + +GV+L+ + +
Sbjct: 113 EGPADEVLLIINAGCAEADTAWLRSQLEPSGLVITDRKADGVLLALQGPEAIARLEALAA 172
Query: 118 ------ERFS--------------------------------------IADVLLHRTWGH 133
RF A V L
Sbjct: 173 TDLGGLPRFGHRSIQLAGTAAAEAAGATAFVARTGYTGEDGVELLLDRAAGVALWAQLLA 232
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ LR+ + +D ST P +A + L + + +IG+EV+ R
Sbjct: 233 EGVTPCGLGARDTLRLEAAMHLYGSDM-NSTTTPLEASLGWLVHLEMP-AAFIGREVLER 290
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249
+ R+ + + G P+L +G + +A+A+A +
Sbjct: 291 QSAEGVSRRLVGLKLQGRAIARHGYPVLRAGQVVGEVTSGTWSPTLGEAIALAYV--PAD 348
Query: 250 AIKKGMALTVH 260
A + G L V
Sbjct: 349 ATRVGTELAVE 359
>gi|10639157|emb|CAC11159.1| probable aminomethyltransferase [Thermoplasma acidophilum]
Length = 336
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 69/320 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A FL + V L +A L G ++ ++ ++ ED++
Sbjct: 25 SHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRMGEDSYF 84
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------------- 93
+ + + + + +V IE
Sbjct: 85 FVPNAGTTEKIYRWVSDHSAGYSVKIENVSNRISSIALQGPESEEVLNELGFSYPGYFKF 144
Query: 94 ----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDI 141
I + +++S FI ++ L + + +
Sbjct: 145 QYVSGKYMNAITGKDQIIISGTGYTGEKGVEFIIPNEHAVELWKKLLEAINKRNGLPAGL 204
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQ---EVVSRIQ 195
LR+ G++ DF P++A +S ++G+ E+ R
Sbjct: 205 GARDTLRMEKGMLLSGHDF-NEDRDPYEA------SVSFIVNNDEDFVGKKNLEIRRRSD 257
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251
H R +++ D +P +G+PI +GT+ K +A+ IDK
Sbjct: 258 HEIF---RGFVLS--DGIPRNGNPIKAGGKRVGTVTSGTISPVLNKGIALGYIDKAYSKE 312
Query: 252 KKGMALTVHGV--RVKASFP 269
+ + + V + + P
Sbjct: 313 NTEVMIEIRSVDHKAVVTKP 332
>gi|16082469|ref|NP_393488.1| aminomethyltransferase (glycine cleavage system T protein)
[Thermoplasma acidophilum DSM 1728]
Length = 359
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 69/320 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V GK A FL + V L +A L G ++ ++ ++ ED++
Sbjct: 48 SHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRMGEDSYF 107
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--------------------------------- 93
+ + + + + +V IE
Sbjct: 108 FVPNAGTTEKIYRWVSDHSAGYSVKIENVSNRISSIALQGPESEEVLNELGFSYPGYFKF 167
Query: 94 ----------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL--LHRTWGHNEKIASDI 141
I + +++S FI ++ L + + +
Sbjct: 168 QYVSGKYMNAITGKDQIIISGTGYTGEKGVEFIIPNEHAVELWKKLLEAINKRNGLPAGL 227
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL---TKGCYIGQ---EVVSRIQ 195
LR+ G++ DF P++A +S ++G+ E+ R
Sbjct: 228 GARDTLRMEKGMLLSGHDF-NEDRDPYEA------SVSFIVNNDEDFVGKKNLEIRRRSD 280
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAI 251
H R +++ D +P +G+PI +GT+ K +A+ IDK
Sbjct: 281 HEIF---RGFVLS--DGIPRNGNPIKAGGKRVGTVTSGTISPVLNKGIALGYIDKAYSKE 335
Query: 252 KKGMALTVHGV--RVKASFP 269
+ + + V + + P
Sbjct: 336 NTEVMIEIRSVDHKAVVTKP 355
>gi|87199867|ref|YP_497124.1| glycine cleavage system aminomethyltransferase T [Novosphingobium
aromaticivorans DSM 12444]
gi|87135548|gb|ABD26290.1| aminomethyltransferase [Novosphingobium aromaticivorans DSM 12444]
Length = 388
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 108/310 (34%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A L+AI+ D+ TLP AR S +L G IL ++++ F
Sbjct: 70 SHMGQIYVSGEGAEAALEAILPIDLSTLPLGGARYSLLLNEDGGILDDLMVTRWGT-GFY 128
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI---------- 116
L ++ + + I L Y L V + N + + +
Sbjct: 129 LVVNGATKWDDIGHLREY-LPDEVTLNHLEDNALFALQGPAACAALEPLVKGEQPLSALT 187
Query: 117 -----DERFSIADVLLHRTWGHNEK---------IASDIKTY---------------HEL 147
R D + R+ E A+++ L
Sbjct: 188 FMRGAAFRLGGVDAWISRSGYTGEDGFEISVPSTKAAELADLICAQPQVKTIGLGARDSL 247
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRP 204
R+ G+ D T+ P A DLL GI+ + G ++G + V + +R
Sbjct: 248 RLEAGLPLYGHDMT-DTVDPVSA--DLLFGINKRRRNEGGFVGADKVLPLIASGAATRRV 304
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
+ G+ +L++D E+GT+ A+A +D +++
Sbjct: 305 GLAIEGRMAAREGATVLSNDAEVGTVTSGGFSPSLERPIAMAYVPVDLAAPGTA--LSID 362
Query: 259 VHGVRVKASF 268
V G ++ AS
Sbjct: 363 VRGRKLAASV 372
>gi|284008419|emb|CBA74862.1| aminomethyltransferase (glycine cleavage system T protein)
[Arsenophonus nasoniae]
Length = 377
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 101/306 (33%), Gaps = 48/306 (15%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ I + G+ FL+ ++ DV L A + +L G ++ ++ ++D + L
Sbjct: 65 TIIDLHGELCRDFLRYLLANDVAKLKEPGEALYTGMLNASGGVIDDLVVYYFDDDYYRLI 124
Query: 69 IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA----- 123
+ + R + + + + ++++ + + S +DE+ IA
Sbjct: 125 ANSATRQKDLAWINEHIKNYLIDVQVRDDLAFIAIQGPDAQQKVQSLLDEQQKIAVINMP 184
Query: 124 ------------------DVLLHRTWGHNEKI-------------ASDIKTYHELRINHG 152
L + E+ + + LR+ G
Sbjct: 185 LFHGKQINDWFITTVGYTGELGYEIALPKEQAVNFWQKLLDLNIKPAGLAARDTLRLEAG 244
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR--------KRP 204
+ + + P A M+ + +IG+E + R + + +
Sbjct: 245 MNFYGQEM-NELVSPLAANMEWTIAWQPEERDFIGREALERQRQVGTEKLVGLVMRDRGT 303
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+ + + I GT +G ++A+AR+ ++ ++ + + H + V
Sbjct: 304 LQADLPVRFIDTAGKLCQGIITSGTFSPTLG-LSIALARV-PLNIGMQAVVQIKKHEMPV 361
Query: 265 KASFPH 270
+ P
Sbjct: 362 QVVKPS 367
>gi|327482759|gb|AEA86069.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
stutzeri DSM 4166]
Length = 360
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 98/303 (32%), Gaps = 42/303 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A SA+L +G ++ ++ + +
Sbjct: 50 SHMTVVDVAGDQASAYLQHLLANDVARLKSPGRALYSAMLNERGGVIDDLIVYLT-DWGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ S RD + + V I +P ++ + + + +
Sbjct: 109 RLVVNASTRDKDLAWMQAQAADFAVEINERPQLAMLAIQGPQARTRTAELVSQSRAALIH 168
Query: 120 -------FSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIV------------ 154
+ D + RT E A + + GI
Sbjct: 169 ELKPFQGLAEGDWFIGRTGYTGEDGLEIILPAEQAPDFLSELVGAGIPPIGLGARDTLRL 228
Query: 155 DPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ + + + P A M + ++G+ + + + + + K ++
Sbjct: 229 EAGLNLYGQDMTEDVSPLAANMGWTIAWEPAERDFVGRAALEQQRAQGDLPKLVGLVLEE 288
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ + + + + G + K++A+AR+ + + + V+
Sbjct: 289 RGVLRAHQVVRVNGVGDGEITSGSFSPTLGKSIALARV-PAGTGERAEVEIRGKWYPVRV 347
Query: 267 SFP 269
P
Sbjct: 348 VQP 350
>gi|163732810|ref|ZP_02140255.1| sarcosine dehydrogenase, putative [Roseobacter litoralis Och 149]
gi|161394170|gb|EDQ18494.1| sarcosine dehydrogenase, putative [Roseobacter litoralis Och 149]
Length = 796
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 91/289 (31%), Gaps = 57/289 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A FLQ + ++ P A + +L +G +I +D + L +
Sbjct: 491 IEVTGPDACAFLQHLAMRNMDR-PAGTAIYTPLLNERGTYESDITAHRIADDHYRLFV-- 547
Query: 72 SKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSW-NQEHTFSNSSFIDERFSIADVL 126
+ I + L + LR +V ++ + VL E ++
Sbjct: 548 --GTNAIKRDLAWALRQSDGFDVTLKDSTEDYAVLCLMGPEAARIVAATGAPELCDLGYF 605
Query: 127 ------------------------------------LHRTWGHNEKIASDIKTYHELRIN 150
++ + + + + +RI
Sbjct: 606 KVGPAFIAGKHVRAVRMSYVGEAGWEITCKAENAQAIYAAFQSAGAVPAGLFAQSSMRIE 665
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITG 209
G + + P + M +G++ G +IG Q + R+Q ++ + I
Sbjct: 666 KGFAAMGHEL-DGDLSPVEVGM---HGMAKKTGGFIGAQALAERVQ---TSKRSLVTIVF 718
Query: 210 TDD--LPPSGSPILTDDIEIGTLGVVV-GKKALAIARIDKVDHAIKKGM 255
D+ +P P+ IG + G + A + V+ + G
Sbjct: 719 DDETAVPLGHEPVYAGPDIIGQITSASFGYRIGAPVALAHVNATVDGGA 767
>gi|84393495|ref|ZP_00992250.1| glycine cleavage system T protein [Vibrio splendidus 12B01]
gi|84375848|gb|EAP92740.1| glycine cleavage system T protein [Vibrio splendidus 12B01]
Length = 377
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G +A L++++ D++ LP R + QG I+ +++ + D
Sbjct: 59 SHMGQLRLHGANAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + + ID L + L ++V +E+ ++ + + + F +
Sbjct: 118 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 176
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 177 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSLRLE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D +T +L+ + + G + G +++ +I +++ RKR
Sbjct: 237 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 296
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + +D +IG + ++A R D + +
Sbjct: 297 LVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNAGKPVSMAYVRTDLAAIGTEVFADVR 356
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 357 GKKLPMTVEK 366
>gi|302816394|ref|XP_002989876.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii]
gi|300142442|gb|EFJ09143.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii]
Length = 409
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 46/276 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK AIPFL+ ++ D+ L SA +G + +I+K++
Sbjct: 81 SLFDVSHMCGLTLKGKDAIPFLETLVVGDIAGLSDGSCSLSAFTNEKGGTIDDTVITKVK 140
Query: 62 EDTFILEIDRSKRDSLI----DKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ L ++ RD + L YK + V + ++ + +
Sbjct: 141 DGHVYLVVNAGCRDKDLAHIGKHLEAYKSKGKDVSSHVHDERSLLALQGPLAASTLQHLV 200
Query: 117 DERFSI-------------ADVLLHRTWGHNEK--------------------------I 137
E S A+ + RT E +
Sbjct: 201 KEDLSKVYFGNFRILSVNGAECFITRTGYTGEDGFEISVPSEHALELAKALLEKSEGKIL 260
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ + LR+ G+ D +T + + +G ++G +V+ +
Sbjct: 261 LTGLGARDSLRLEAGLCLYGHDMDDNTSVVEAGVAWTIGKRRRAEGGFLGADVILKQLKE 320
Query: 198 NIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
+ RKR +I+ + PI D IG +
Sbjct: 321 GVSRKRVGMIS-EGAPARAHCPIYNASDEVIGEVTS 355
>gi|88860306|ref|ZP_01134944.1| aminomethyltransferase [Pseudoalteromonas tunicata D2]
gi|88817504|gb|EAR27321.1| aminomethyltransferase [Pseudoalteromonas tunicata D2]
Length = 359
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 100/302 (33%), Gaps = 45/302 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A + +L +G ++ +I E +
Sbjct: 50 SHMTIVDVKGADAKAFLRKLVANDVAKLTVPGKALYTGMLNHEGGVIDDLIIYFFSETDY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-- 123
L ++ + R+ + + V + +P ++ ++ + + A
Sbjct: 110 RLVVNSATREKDLAWIAQISADFAVEVTERPEFAMIAVQGPNAKAKTATVLSAAQNAAIE 169
Query: 124 ----------------------------------DVLLHRTWGHNEKIASDIKTYHELRI 149
L + + + LR+
Sbjct: 170 GMKPFFGVQADNLFIATTGYTGEAGYEIVVHNDEAADLWQKLLDAGVAPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P A M +IG+ + + + + K ++
Sbjct: 230 EAGMNLYGLDM-DETVSPLAANMGWTITWEPEDRDFIGRAALVKQKAEG-VDKLVGLVYE 287
Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI-DKVDHAIKKGMALTVHGVRV 264
+ SGS ++ + E GT +G ++A+AR+ + V + M + V+V
Sbjct: 288 DKGVLRSGSKVIVEGGEGVITSGTFSPTLG-YSIALARVPNTVGETAQVEMRKKLVDVKV 346
Query: 265 KA 266
A
Sbjct: 347 VA 348
>gi|213966371|ref|ZP_03394551.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46]
gi|213950968|gb|EEB62370.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46]
Length = 390
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/328 (16%), Positives = 109/328 (33%), Gaps = 74/328 (22%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS I+V G+ A FL ++I+A + L A+ + I+ G I+ +I ++
Sbjct: 60 LSLMGIIRVTGEDAAAFLAHSLISA-IKPLALGRAKYTMIVQEDGGIIDDLIIYRLGSHE 118
Query: 65 FILEIDRSKRDS-----------------------------------LIDKLLFYKLRSN 89
F+L + + + L+ +LL L +
Sbjct: 119 FMLVQNAAAAEDVYSTLRERVGGYNVQVERMNDKNVLLAIQGPKAAKLLRRLLPQDLHAT 178
Query: 90 VI---------IEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTW--GHNEK 136
+ +E+ + +V + E F D + ++ + E
Sbjct: 179 LDGMNYYSCTLLEVAGVEMIVARTGYTGEDGFEIFPPADRAVEVWRAIIAAGGKVENPED 238
Query: 137 IASDIKTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYI 186
A + LR+ G+ + P +A + + + TKG +I
Sbjct: 239 PADNGADLGLLPCGLACRDTLRLEAGMPLYGYELTRDRT-PLEAGLKSI--MGPTKGQFI 295
Query: 187 GQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSP-ILTDDIEIGTLGVV----VGKKALA 240
G+ + +R ++ + + + D P G+ I + E+G L +
Sbjct: 296 GRNALI---NRPQSKELLVGLRFSGDEAPKRGTKLIDAEGNEVGVLTSAKVSPTLGHPIG 352
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKASF 268
A + + A G LTV G A+
Sbjct: 353 FAYVQRWQSAT--GTELTVEGTDTTATV 378
>gi|293394584|ref|ZP_06638878.1| aminomethyltransferase [Serratia odorifera DSM 4582]
gi|291422893|gb|EFE96128.1| aminomethyltransferase [Serratia odorifera DSM 4582]
Length = 388
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 73 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLSEDYF 132
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ ++ +
Sbjct: 133 RLVVNSATRDKDLAWIEQHAAPYGVALTVRDDLALIAVQGPQA 175
>gi|154493553|ref|ZP_02032873.1| hypothetical protein PARMER_02893 [Parabacteroides merdae ATCC
43184]
gi|154086763|gb|EDN85808.1| hypothetical protein PARMER_02893 [Parabacteroides merdae ATCC
43184]
Length = 361
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 95/305 (31%), Gaps = 56/305 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPIGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94
++ +L L S V E
Sbjct: 116 IAKDWDWCVSHNTVGAELENSSDRTAQLAVQGPKAVEVLQRLTPVDLSSIPYYSFVTGEF 175
Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150
V++S + F + D+ +I + + G E I + LR+
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPDDAMTIWNAIFE--AGKPEGIKPIGLGARDTLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G D T P +A + + + K + + + R + + RK
Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVSRKLCAFELVD 291
Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G I + IG + + + + + + + V G
Sbjct: 292 KGIPRHGYEIADAEGNIIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTE--ICIKVRGRN 349
Query: 264 VKASF 268
+KA
Sbjct: 350 LKAQV 354
>gi|134102062|ref|YP_001107723.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
gi|291004903|ref|ZP_06562876.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133914685|emb|CAM04798.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 950
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 62/287 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A FL + T LP AR + G +L + ++ ED +++
Sbjct: 617 IEIAGPDAATFLNRVYTNAFAKLPVGKARYGMMCGADGMVLDDGVSLRLAEDRYLMTTTT 676
Query: 72 SKRDSLID-----------KLLFY--KLRSN-VIIEIQPINGVVLSWNQEHTFSNSS--- 114
++D L + + I + + + S+
Sbjct: 677 GNAAKVMDWLEEWLQTEWPHLAVHCTSVTEQWATIAVAGPDSRTVVGRMAPALDVSAEAF 736
Query: 115 ---------------FIDERFSIADVLLHRT----------WGHNEKIASDI-------K 142
R S + L + W + +D+ +
Sbjct: 737 GFMEFRETVLHNGIPARICRISFSGELAYEINVASWYGLAVWEAVAEAGADLDITPYGTE 796
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T H LR G V D T+ PHD MD + +S K ++G+ +R RK
Sbjct: 797 TMHVLRAEKGFVIVGQD-TDGTVTPHDLGMDWV--VSKRKD-FVGRRSFARPDTAREDRK 852
Query: 203 RPMIITGTDDLP--PSGSPILTDDIEI-------GTLGVVVGKKALA 240
+ + + D P G+ ++ G + AL
Sbjct: 853 QLVGLLPVDPAERLPEGAQLVAPGAPAEPPVPMLGHVTSSYRSAALG 899
>gi|118618856|ref|YP_907188.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
ulcerans Agy99]
gi|166221558|sp|A0PTP8|GCST_MYCUA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|118570966|gb|ABL05717.1| aminomethyltransferase GcvT [Mycobacterium ulcerans Agy99]
Length = 367
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIF 114
Query: 67 LEIDRSKRDSLIDK--------LLFYKL-RSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVAALQAAAPSGLTITDLHRSYAVLAVQGPRSTEVLAALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HELR 148
D ++ V + RT W + + LR
Sbjct: 175 ADSSYNGVSVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVAEVGGSPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMII 207
G + I P A I K + G+E + + R R + +
Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AIGWKKDAFFGREALLAEKAAGPRRLPRGLRM 291
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH--- 260
G L P G +L +G +A+A ID D ++ G +TV
Sbjct: 292 VGRGVLRP-GLTVLNGSTPVGVTTSGTFSPTLQIGIALALID-TDAGVEDGQQITVDVRG 349
Query: 261 -GVRVKASFPH 270
V + P
Sbjct: 350 RAVECEVVRPP 360
>gi|83952199|ref|ZP_00960931.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
gi|83837205|gb|EAP76502.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
Length = 373
Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 55/271 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + T D+ R I G+++ ++ K+ + F L I
Sbjct: 65 VEIAGPDAARLIQYLTTRDMRGAKVGQGRYVPICDHAGRLINDPVLLKLGDGRFWLSIAD 124
Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92
S K + ++ L L Y +
Sbjct: 125 SDIELWASAIAAERGFDVEVHEPDVSPLAIQGPKAERVVADLFGDWVTELRYFGFRQTEL 184
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRI 149
P+ W+++ F R + ++ +G +D++ RI
Sbjct: 185 RGIPLVLARSGWSKQGGFELYLQDGTRGAELWQMVKAAGTPYGIRPGAPNDLE-----RI 239
Query: 150 NHGIVDPNTD--FLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHRNIIRKRPMI 206
G+V D + P + + L + K ++G+E + R++ R+R
Sbjct: 240 ESGLVSYGADGRLQVNPCNPFEIGLGAL--VDFDKPEDFVGREALLRLRREGAARRRVSY 297
Query: 207 ITGTDDLP--PSGSPILTD-DIEIGTLGVVV 234
+ + G P+LT G L V
Sbjct: 298 VIEGAPIQGFEHGLPVLTGQGAPAGVLSEAV 328
>gi|148244966|ref|YP_001219660.1| glycine cleavage system aminomethyltransferase T [Candidatus
Vesicomyosocius okutanii HA]
gi|146326793|dbj|BAF61936.1| glycine cleavage system aminomethyltransferase [Candidatus
Vesicomyosocius okutanii HA]
Length = 358
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 83/276 (30%), Gaps = 42/276 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ S + G A FLQ +I DV L A +L G I+ ++ + +
Sbjct: 49 SHMSVVDFKGVEAKAFLQVLIANDVDKLRVQGKALYGCMLNELGGIVDDLIVYCRNNEYY 108
Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNVIIEIQPINGVVLS 103
+ I+ D + L + R V I + V
Sbjct: 109 RMVINARTTDKDMAWINTQANSFDVLVEPISDLAMIAVQGPNAREKVFSAIPGVEEVCGE 168
Query: 104 WNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
+ S R + + + LR+
Sbjct: 169 LKSFNAASLGKLFIARIGYTGEDGFEIMLPLNAAKFTWKMLLEAGVKPYGLGAFDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + + P +A + +S +IG++ + ++ + + + ++
Sbjct: 229 AGVSLYGLEM-NDMVSPLEAALAWTVDLSNENRAFIGRDALETLKDKGVKKTIIGLVLEG 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVV----GKKALAIA 242
+ + ++T E G + + KA+A+A
Sbjct: 288 KGVIRNHQKVMTSLGE-GKVTSGIFSPTIGKAIALA 322
>gi|294460278|gb|ADE75721.1| unknown [Picea sitchensis]
Length = 411
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 103/319 (32%), Gaps = 56/319 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK +PFL+ ++ ADV L + +G +++K++
Sbjct: 83 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLSPGSGTLTVFTNEKGGATDDSIVTKVK 142
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLR------------------------------ 87
+D + ++ RD + + +K R
Sbjct: 143 DDHIYIVVNAGCRDKDLAHIESHMKAFKARGGDVDWQIHDDRSLLALQGPLAAPTLQKLT 202
Query: 88 ----SN--------VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
S + I P + E F S D + +L G
Sbjct: 203 KEDLSKLYFSSFRMIDINGSPCYITRTGYTGEDGFEISVPSDHAVDLTKAILDGGEGKLR 262
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRI 194
+ LR+ G+ D I P +A + G +G ++G EV+ +
Sbjct: 263 LTG--LGARDSLRLEAGLCLYGNDME-QDITPVEAGIAWTIGKRRRTEGGFLGAEVILKQ 319
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDH 249
R+R +I+ P S S I+ IG + KK +++ + +H
Sbjct: 320 LEEGPARRRVGMISA-GPPPRSHSEIMDASGNPIGEVTSGGFSPCLKKNISMGYVKSGNH 378
Query: 250 AIKKGMALTVHGVRVKASF 268
+ + V G A+
Sbjct: 379 KTGSELKVLVRGKPYDATV 397
>gi|195997667|ref|XP_002108702.1| hypothetical protein TRIADDRAFT_18436 [Trichoplax adhaerens]
gi|190589478|gb|EDV29500.1| hypothetical protein TRIADDRAFT_18436 [Trichoplax adhaerens]
Length = 373
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 96/300 (32%), Gaps = 54/300 (18%)
Query: 20 IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79
+ FL+++I DV LP S G I+ ++SKI +++ + + + + ++
Sbjct: 63 VKFLESLIVTDVANLPQGRGTLSVFTNENGGIIDDLIVSKISDESISVVSNAACSEKVVQ 122
Query: 80 KLL-----------------------FYKL---RSNVIIE-------------------I 94
+ L +S V+++ I
Sbjct: 123 HIQTKMNQFNSSSHQSVDVKVITNRGLLALQGPKSAVVLQRLTNSNLSQIPFMGYTNSNI 182
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
I+G ++ A L H E + + LR+ G+
Sbjct: 183 ADIDGCFIARGGYTGEDGFEISVPSDYCA-KLAQEFLKHPEVKLAGLGARDSLRLEAGLC 241
Query: 155 DPNTDFLPSTIFPHDALMDLLNGIS-LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P +A + G + G + G + + + RKR +I+ T
Sbjct: 242 LYGNDI-DEETTPIEAGLAWTVGKARRNTGNFPGSDTIIKQLQEGPSRKRVGLIS-TGPP 299
Query: 214 PPSGSPILTD-DIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268
G+ I + D EIG + +L A+ I I + L V +V A+
Sbjct: 300 ARGGTKIFSSHDDEIGIITSGSPSPSLKKNIAMGYIKTAFCKIGTEVQLQVRNKKVNATI 359
>gi|306840695|ref|ZP_07473444.1| glycine cleavage system T protein [Brucella sp. BO2]
gi|306289268|gb|EFM60512.1| glycine cleavage system T protein [Brucella sp. BO2]
Length = 367
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ ++V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLVEVSGADAAALL--AETCPLDPTILKMGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKAVKVNPLDRVFLALQGPEAEAVITDAGLPGADLAFM 173
Query: 105 -----NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHG 152
Q + S + E + EK+ +D + LR+ G
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADEARALAEKLLADERVEWIGLAARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
+ D P T P A + + + K + G + V + KR +
Sbjct: 234 LCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGLKPEG 291
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 292 RQPVRAGADLFDESGRQIGTVTS 314
>gi|254456654|ref|ZP_05070083.1| aminomethyltransferase, glycin cleavage system T protein
[Candidatus Pelagibacter sp. HTCC7211]
gi|207083656|gb|EDZ61082.1| aminomethyltransferase, glycin cleavage system T protein
[Candidatus Pelagibacter sp. HTCC7211]
Length = 452
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/331 (16%), Positives = 90/331 (27%), Gaps = 85/331 (25%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
I+V G A F +IT D + AR + G +L ++ +I ED F
Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRIAEDEFWFSLSD 161
Query: 67 ---------------LEIDRSKRD------------SLIDKLLFYKLRSNVIIEIQPING 99
+ + D +L+ L V + P G
Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVSPVQIQGPKSKALMKDLCG----DQVDFDNMPFYG 217
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-ASDIKT--------------- 143
+ E S I + + + + + + A D+
Sbjct: 218 LA-----EVKVGGRSCIISQSGFSGEAGYEIYLRDSTLYAEDMWNAVLEAGKKHSLMVIA 272
Query: 144 -YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHR 197
H RI GI+ D P + +S KG Y+G+ + ++
Sbjct: 273 PAHHRRIQAGILSWGQDMDQQH-NPFQCNLGYQVSLSGKGEWSKKGDYVGKAALEKMGAE 331
Query: 198 NIIRKRPMIITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKAL 239
K+P + L G PI + +G + A+
Sbjct: 332 LKDGKKPYKLQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKKQNIAM 390
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
D +A G G + K P
Sbjct: 391 GYVPFDGTLNA--NGFPKGKVGTKFKVHLPE 419
>gi|255015989|ref|ZP_05288115.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
2_1_7]
gi|298377400|ref|ZP_06987353.1| glycine cleavage system T protein [Bacteroides sp. 3_1_19]
gi|298265814|gb|EFI07474.1| glycine cleavage system T protein [Bacteroides sp. 3_1_19]
Length = 361
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94
K ++ +L L S V E
Sbjct: 116 IDKDWDWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175
Query: 95 QPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHG 152
V++S + ++ G E I + LR+ G
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYFYPSDAMTIWNAIFEAGKPEGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K + + + R + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQEKG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G I + IG + + + + + + ++ +
Sbjct: 294 IPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQ 353
Query: 266 ASFPH 270
Sbjct: 354 VVKAP 358
>gi|150006976|ref|YP_001301719.1| glycine cleavage system aminomethyltransferase T [Parabacteroides
distasonis ATCC 8503]
gi|166221559|sp|A6L8T3|GCST_PARD8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149935400|gb|ABR42097.1| putative aminomethyltransferase [Parabacteroides distasonis ATCC
8503]
Length = 361
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 85/307 (27%), Gaps = 54/307 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94
K ++ +L L S V E
Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEF 175
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRIN 150
V++S + + + K + LR+
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYF--YPSDGMTIWNAIFEAGKPEGIKPIGLGARDTLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G D T P +A + + + K + + + R + + RK
Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQE 291
Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G I + IG + + + + + + ++
Sbjct: 292 KGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLK 351
Query: 264 VKASFPH 270
+
Sbjct: 352 AQVVKAP 358
>gi|284045208|ref|YP_003395548.1| glycine cleavage system protein T [Conexibacter woesei DSM 14684]
gi|283949429|gb|ADB52173.1| glycine cleavage system T protein [Conexibacter woesei DSM 14684]
Length = 363
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+ G A+ FLQ +++ DV + A+ S + G +L ++ ED ++
Sbjct: 57 SHMGEIETRGPGALAFLQRLLSNDVAKIAVGGAQYSVLCREDGGVLDDLFTYRLAEDRYL 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + + + + S +V + + + +L+ + + + E AD
Sbjct: 117 TVTNAANHAKDLAWFMRQVVASDDVEVVDRAADYAMLAVQGPEARALVAGLTE--GGADA 174
Query: 126 LLHR 129
L R
Sbjct: 175 LPGR 178
>gi|162447263|ref|YP_001620395.1| glycine cleavage system T protein [Acholeplasma laidlawii PG-8A]
gi|161985370|gb|ABX81019.1| glycine cleavage system, T protein [Acholeplasma laidlawii PG-8A]
Length = 358
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 51/304 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY---KIARGSAILTPQGKILLYFLISKIEED 63
S+ I + GK A+ + T VL+ + +L G I+ ++ D
Sbjct: 52 SHMGQILIEGKDALAY-----TNYVLSSTTELRPQNQYGLLLQNDGGIIDDLMVYPFSSD 106
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------- 110
+L ++ S + + L K ++ + ++ ++F
Sbjct: 107 QILLVVNASNIEKDFNHLSSIKHTFDIHLRNISDKFNCIAVQGPNSFKFLSKLFQDLPKH 166
Query: 111 ---------SNSSFIDERFSIADVLLHRTW---GHNEKIASD----------IKTYHELR 148
+ + R + G+ I D + LR
Sbjct: 167 SSDFMFTHNEHGPLLISRSGYTGEDGFEIYTYDGYASLIWDDLYKLGVKPIGLGARDTLR 226
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ + TI P +A + + K +IG+ + N +RK
Sbjct: 227 FEAGMPLYGNEM-NETINPIEAGLGF--AVDFKKDDFIGKSALL-AYKENPLRKNVGFEL 282
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
++ SG I + IG + AL A ID + + + + V
Sbjct: 283 LEKNIARSGYEIYVGNQLIGHVTTGYLSPSTNIALGFALIDAKHAKLGTIIDIKIRNKFV 342
Query: 265 KASF 268
KA
Sbjct: 343 KAVV 346
>gi|157963119|ref|YP_001503153.1| glycine cleavage system aminomethyltransferase T [Shewanella
pealeana ATCC 700345]
gi|189039321|sp|A8H7T1|GCST_SHEPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157848119|gb|ABV88618.1| glycine cleavage system T protein [Shewanella pealeana ATCC 700345]
Length = 364
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 58/314 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L G ++ + + + +
Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F D + + +
Sbjct: 110 RIVVNSATREKDLAWINEQVKGFSVEVTERPELAMIAVQGPNAKAKAATVFNDAQNAAIE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + + + LR+
Sbjct: 170 GMKPFFGVQAGSLFIATTGYTGETGYEVIVPNDEAEALWQAFLDAGIKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ-------------H 196
G+ D ++ P A M + + G++ + +I+
Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTVAWEPAERDFNGRQALEKIKAEGTDKLVGLIMDA 288
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ +IR + D I + GT +G ++A+AR+ + + +
Sbjct: 289 KGVIRHGMSVFFTDSDGVEQQGTITS-----GTFSPTLG-YSIAMARVPRSIGDV-AEVE 341
Query: 257 LTVHGVRVKASFPH 270
+ V VK P
Sbjct: 342 MRKKRVPVKVIAPS 355
>gi|295696804|ref|YP_003590042.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912]
gi|295412406|gb|ADG06898.1| glycine cleavage system T protein [Bacillus tusciae DSM 2912]
Length = 380
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 53/276 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYK-IARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+V G+ A +Q +T D+ + + + G I+ ++ ++ + F L +
Sbjct: 58 EVIGREAYLLMQYAMTNDLRRIGKGRQGIYTCLCKDDGGIVDDVIVYYLDNELFYLITNT 117
Query: 72 SKRDSLIDKLLFYKLRSNV---IIEIQPINGVVLSWNQEHTFSNSSFIDE---------- 118
R+ + L + R V +I++ + + + + +
Sbjct: 118 LSREKVGRWLADMRDRLAVDAHVIDVTSSTAYLAVQGPKSADVVAELLGDGIRALSYFEM 177
Query: 119 ---RFSIADVLLHRT-----WGHNEKIASDIKTY----------------------HELR 148
R S + VLL RT G+ S+ + LR
Sbjct: 178 AEFRLSDSPVLLTRTGYTGELGYELHFPSEYAFWMWECVTEAGRGYGMRPVGGFAIQTLR 237
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK----RP 204
TD + P +A + + L KG + G+ ++ IQHR + R+ R
Sbjct: 238 AEKAYRAYGTDM-DANTNPFEAGLGWT--VRLDKGDFAGKSALADIQHRGVTRRLTGFRL 294
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ G+ LP G+ + + G L V L
Sbjct: 295 DLAAGS--LPEKGTALRCEGRTAGYLTTVCASPTLG 328
>gi|226328257|ref|ZP_03803775.1| hypothetical protein PROPEN_02150 [Proteus penneri ATCC 35198]
gi|225202990|gb|EEG85344.1| hypothetical protein PROPEN_02150 [Proteus penneri ATCC 35198]
Length = 364
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 95/309 (30%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ ++ +
Sbjct: 50 SHMTIVDLHGSQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDDSFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ + R+ + + + V I ++ ++ + E+
Sbjct: 110 RLVVNSATREKDLAWIEHHASDYVVDITVRDDLALIAVQGPHAQEKVQRLLTEQQRQVVS 169
Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + + LR+
Sbjct: 170 AMKPFYGVELDDLFIATTGYTGEAGYEIAMPKEQAVDFWKKLLAVGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + + TI P +A M +IG+E + +++ K ++
Sbjct: 230 EAGMNLYSQEM-DETINPLEANMGWTIAWVPEDRQFIGREALEKLRATGTD-KLVGLVMR 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ +G+ + D +G L V +A+AR+ + +
Sbjct: 288 EKGVLRAGTAVHFTDD-LGELREGVITSGTFSPTLGFSIALARV-PAGIKDSAIVLMRNR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EMPVEVVKP 354
>gi|260062498|ref|YP_003195578.1| glycine cleavage system aminomethyltransferase T [Robiginitalea
biformata HTCC2501]
gi|88784063|gb|EAR15233.1| aminomethyltransferase [Robiginitalea biformata HTCC2501]
Length = 361
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 98/318 (30%), Gaps = 57/318 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKI--LLYFLISKIEEDT 64
S+ + G A+ +Q + + D L A+ S P ++ + ++ +I++ T
Sbjct: 49 SHMGEFLIEGPRALELVQRVSSNDASKLEVGRAQYS--CMPNERMGIVDDLIVYRIKDTT 106
Query: 65 FILEIDRSKRDSLIDKLLFY------KLR--SNV--IIEIQPINGVVLSWN----QEHTF 110
++L ++ S D D + Y ++R S+ ++ IQ V +
Sbjct: 107 YLLVVNASNIDKDWDHISKYNEEIGAEMRNLSDAYSLLAIQGPKAVAAMQSLTSEDLAAI 166
Query: 111 SNSSFIDERFSIADVLLHRTWGHN------------------EKIASDIKTY-------- 144
F F+ ++ G+ E++ Y
Sbjct: 167 PFYHFAVGDFAGIPNVIISATGYTGSGGFEIYCKNEEVGQVWERVMEAGAAYGIKPIGLA 226
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ G D ST P +A + + TK ++ E ++ + + RK
Sbjct: 227 ARDTLRLEMGYCLYGNDIDDSTS-PLEAGLGWI--TKFTKE-FVNHEALAAQKAAGVERK 282
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGM 255
+P I D IG + L ++ +
Sbjct: 283 LVGFEIEQRGIPRKDYTIADADGQPIGRVTSGTMSPSLNRGIGLGYVPVEFAAPGTTVNI 342
Query: 256 ALTVHGVRVKASFPHWYK 273
+ V P +YK
Sbjct: 343 QIRNKNVPATIVKPPFYK 360
>gi|325284163|ref|YP_004256704.1| Aminomethyltransferase [Deinococcus proteolyticus MRP]
gi|324315972|gb|ADY27087.1| Aminomethyltransferase [Deinococcus proteolyticus MRP]
Length = 393
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 43/282 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTF 65
S+ + G A+ FLQ + DV L A + L +G ++ I + E +
Sbjct: 93 SHMGQFRFRGPGALDFLQHVTPNDVSKLKPGRAHYN-WLPAEEGGLVDDIYIYQAGEQDY 151
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------------TFS 111
++ ++ L +V + + + V+++ T
Sbjct: 152 LMVVNAGNIAKDWAHLQALAAGYDVQMTDESDDWVLIAVQGPKAAATLNEFTDADLLTAK 211
Query: 112 NSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDFLPST 164
+SF R DV RT E K + L + GI
Sbjct: 212 RNSFFPGRLLDHDVFFARTGYTGEDGFEVFVKAPEGEALWDAL-LASGIAPAG--LGARD 268
Query: 165 IFPHDALMDLLNGISLTKGCYI----------GQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+A L G ++ + + + R + R++ + +
Sbjct: 269 TLRLEAGF-PLYGHEFSENIHPLSSTYSWVVKDKPYLGRTKMDEAPRQKLIGLKLDKIPV 327
Query: 215 PSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250
G P++ +G + A+A+ +D D +
Sbjct: 328 REGYPVMLGGENVGVVTSGSTSPTLGHPIAMALVDVDAADAS 369
>gi|295836402|ref|ZP_06823335.1| glycine cleavage system T protein [Streptomyces sp. SPB74]
gi|295826004|gb|EFG64604.1| glycine cleavage system T protein [Streptomyces sp. SPB74]
Length = 377
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 95/298 (31%), Gaps = 57/298 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G A L A++ + ++ AR + I G IL ++ + DT
Sbjct: 55 LSHMGEITLTGPQAADLLDFALVGN-IGSVKEGRARYTMICREDGGILDDLIVYRTGADT 113
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100
+++ + S +++D L Y L + I ++G+
Sbjct: 114 YLVVANASNAQTVLDALRERAAGFDADVRDDRDAYALLAVQGPAAPGILAKITEADLDGL 173
Query: 101 VLSWNQEHTFSNSSFIDERFS----------IADVLLHRTWGH-------NEKIASDIKT 143
+ + R A + WG + +
Sbjct: 174 KYYAGLPGSVGGVDVMIARTGYTGEDGFELFCAPADAPKLWGALFAAGTGAGMVPCGLAC 233
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + ++ P DA + + + K G ++G+ + +
Sbjct: 234 RDTLRLEAGMPLYGHELST-SLTPFDAGLGRV--VKFEKTSNGGRFVGRAALEAAAEKAA 290
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
RK +I +P +G ++ +G + L A+A +D A
Sbjct: 291 STPPRKLVGLIAAGRRVPRAGYAVVAGGQAVGEVTSGAPSPTLGKPVAMAYVDATHAA 348
>gi|148975471|ref|ZP_01812342.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3]
gi|145964899|gb|EDK30150.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3]
Length = 377
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L++++ D++ LP R + QG I+ +++ + D
Sbjct: 59 SHMGQLRLHGENAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + + ID L + L ++V +E+ ++ + + + F +
Sbjct: 118 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 176
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 177 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTVEAEVEWIGLGARDSLRLE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D +T +L+ + + G + G +++ +I +++ RKR
Sbjct: 237 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 296
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + + ++G + ++A R D + +
Sbjct: 297 LVGQTKAPVREGAELFDAEGNKVGVVTSGTAGPNAGKPVSMAYVRTDLAAIGTEVFAEVR 356
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 357 GKKLPMTVEK 366
>gi|108803610|ref|YP_643547.1| glycine cleavage system T protein [Rubrobacter xylanophilus DSM
9941]
gi|108764853|gb|ABG03735.1| glycine cleavage system T protein [Rubrobacter xylanophilus DSM
9941]
Length = 442
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A L+ ++ +VL + R S + G ++ + K ++ F
Sbjct: 51 LSSMGQIDVKGPGAERLLRRLLVNEVLDMQPGQLRYSTMCNEAGGVVDDVTVYKFSDEHF 110
Query: 66 ILE---------------------------------------IDRSKRDSL-----IDKL 81
++ + R + + ++++
Sbjct: 111 MVVASSAPRLKSYRWIREHAEGSSAYVTDMTAGIALLAVQGPLSRPLLEGVVEGAELERM 170
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
F++ + + + + E + D+ + D LL R E +
Sbjct: 171 RFFR-FAACRVGEVEVIVSRSGYTGELGYEVYVPADQAREVWDFLLERG-KEFELKPYGV 228
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ LRI + D P ++ I K +IG+E + +Q R I R
Sbjct: 229 EAMQSLRIEKALPLYGPDISEEHT-PFHVGLERW--IRFEKPDFIGREALLGVQRRGIER 285
Query: 202 KRPMIITGTDDLPPSGSPIL-----TDDIEIGTLGVVVGKKALAIARIDK 246
+ ++ ++ +G I E+ G G A+ ++
Sbjct: 286 RWVGLVLESEVPASNGDAIYSIADVASYREVIETGAEAGHYEEALLPGER 335
>gi|73538631|ref|YP_298998.1| glycine cleavage system T protein [Ralstonia eutropha JMP134]
gi|72121968|gb|AAZ64154.1| Glycine cleavage system T protein [Ralstonia eutropha JMP134]
Length = 383
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/323 (14%), Positives = 104/323 (32%), Gaps = 65/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + V G A FL ++ D+ L A S +L +G ++ ++ + ++ F
Sbjct: 56 SHMCALDVRGTDARAFLGRLLANDIGKLKSPGKALYSCMLNREGGVIDDLVVYYLSDECF 115
Query: 66 ILEIDRSKRDSLIDKLLFYKL----------RSN--VIIEIQPINGVVLSWNQEHTFSNS 113
+ ++ ID + + R V +++ + + +
Sbjct: 116 RIVLNAQAASRDIDWMRTQIVESGCSVTLVPRRQDLVTDDVEALAMIAVQGPNAREKVFR 175
Query: 114 SFIDERFS---------------IADVLLHRTWGHNEK---------------------- 136
+ R + + ++L RT E
Sbjct: 176 AMPSTRAADKVKPFNSCFVHDAVVGALMLARTGKTGEDGFEITMLAKHAVHVWDALRSSG 235
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRI 194
A+ + LR+ G+ P D P T P D + + K ++G+ + +R
Sbjct: 236 ICAAGFHAWDTLRLEAGMHVPGRDMGPQTS-PFDVGLGWSVDLG-EKRDFVGKAALQARA 293
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGK------KALAIARIDKV 247
Q ++ + G+ + + SP+++ + IG + ALA+ D +
Sbjct: 294 QASQLV---GLAFEGSGAVARTQSPVMSLEGEVIGKVTSGTYSPTLQMAIALALVSPD-I 349
Query: 248 DHAIKKGMALTVHGVRVKASFPH 270
+ + V K P
Sbjct: 350 KLGSSVSVEVYSKRVSAKVVRPP 372
>gi|167626558|ref|YP_001677058.1| glycine cleavage system aminomethyltransferase T [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189039314|sp|B0TZJ8|GCST_FRAP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|167596559|gb|ABZ86557.1| glycine cleavage system T protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 358
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 44/302 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + GK A FL+ I+ DV L A+ +L + I+ + KI+ + F
Sbjct: 49 SHMLAVDIQGKDAEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------EHTFSN-------- 112
+ ++ R+S + +V I Q +V +HT +
Sbjct: 109 IVVNAGNRESDVAWFRENSQDLDVKITPQQNLAIVAVQGPKAVEIVKHTVTTEVAEEIAK 168
Query: 113 ---------SSFIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRIN 150
S+++ R +++A + + LR+
Sbjct: 169 LKPFTFKFFSNWMFARTGYTGEDGFEIMLPADQVADFWDNLLENGAEPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ +D T P + + +S +IG++ + I K ++ +
Sbjct: 229 AGMHLYGSDMNT-TTTPLERGLGWSVDLSDENRDFIGKKAYLTKKSHGITTKWTGVVLKS 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIK-KGMALTVHGVR 263
+ +G I D+ E G + ALA + + + +G L V V+
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIALAYVPKEGANPIVNIRGKELEVELVK 347
Query: 264 VK 265
K
Sbjct: 348 AK 349
>gi|190575517|ref|YP_001973362.1| glycine cleavage system aminomethyltransferase T [Stenotrophomonas
maltophilia K279a]
gi|229807554|sp|B2FR21|GCST_STRMK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|190013439|emb|CAQ47074.1| putative aminomethyltransferase [Stenotrophomonas maltophilia
K279a]
Length = 370
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F
Sbjct: 50 SHMTVVDLRGDQVRPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
+ ++ S R+ + L V +E +P ++ +
Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVSVEQRPDLAILAVQGPQA 152
>gi|261345604|ref|ZP_05973248.1| glycine cleavage system T protein [Providencia rustigianii DSM
4541]
gi|282566084|gb|EFB71619.1| glycine cleavage system T protein [Providencia rustigianii DSM
4541]
Length = 364
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ D+ L A + +L G ++ ++ +++D +
Sbjct: 50 SHMTIVDLHGEGCRDFLRYLLANDIAKLTIKGRALYTGMLNASGGVIDDLIVYYLDDDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117
L ++ + R+ ++ + + V I ++ ++ T + + I
Sbjct: 110 RLVVNSATREKDLEWIEEHAKGYAVEITVRDDLALLAVQGPHAQQKVHSLLTDAQCAAIQ 169
Query: 118 ERFSIADVLL----------------------------HRTWGHNEKIASDIKTYHELRI 149
+ V R + + + LR+
Sbjct: 170 DMKPFYGVQTGDLFVATTGYTGEKGYEIAMPKEQVVEFWRKLLNAGVHPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D +I P A M +IG+E + +++ + + + I
Sbjct: 230 EAGMNLYGQDM-DESISPLAANMGWTIAWEPQDRQFIGREALEKLREQGTEK--LVGIVM 286
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTV- 259
+ ++ E+G L V +A+AR V + I+ + +
Sbjct: 287 REKGILRAEQVIRFTDELGKLQQGVITSGTFSPTLGFSIALAR---VPNDIQSSAIVEIR 343
Query: 260 -HGVRVKASFP 269
+ V+ P
Sbjct: 344 HREMPVEVVKP 354
>gi|156354936|ref|XP_001623436.1| predicted protein [Nematostella vectensis]
gi|156210133|gb|EDO31336.1| predicted protein [Nematostella vectensis]
Length = 373
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 55/307 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ GK FL+ ++ ADV L S G I +I+K+ +D + +
Sbjct: 56 KLHGKDRTKFLEDLVVADVQGLQSNTGTLSLFTNDNGGIRDDLIINKL-DDVIYVVSNAG 114
Query: 73 KRDSLIDKLLFYKLRS-----NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS------ 121
D + L +L + +V +EI +V + +D S
Sbjct: 115 CADKITQHLK-DRLDAVSGNLDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFMH 173
Query: 122 --------IADVLLHR--------------------------TWGHNEKIASDIKTYHEL 147
+ DV + R + E + + L
Sbjct: 174 GVSTSVYGLKDVRVTRCGYTGEDGFELSVDKDRVVDLCRSLMSRQEAEVKLAGLGARDSL 233
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206
R+ G+ D P +A++ G + + G +++ + Q ++ ++R +
Sbjct: 234 RLEAGLCLYGNDI-DEDTTPVEAVLVWTIGKRRRAEASFPGAKIILQ-QIKDKPKRRRVG 291
Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+ +G+ +L E+G + K+ +A+A I I + L+V+
Sbjct: 292 LVSAGPPARAGTKVLDGEGQEVGVVTSGCPSPSSKQNIAMAYISTPQSKIGTALQLSVYK 351
Query: 262 VRVKASF 268
+V A+
Sbjct: 352 KKVPATV 358
>gi|332830582|gb|EGK03196.1| aminomethyltransferase [Dysgonomonas gadei ATCC BAA-286]
Length = 364
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A FL+ +++ DV +L A+ SAI+ QG I+ ++ E + ++
Sbjct: 49 SHMGEIWVKGPRAEAFLRRMMSNDVASLEIGKAQYSAIINDQGGIVDDIIVYHYEPEKYM 108
Query: 67 LEIDRSKRD 75
L ++ S +
Sbjct: 109 LVVNASNIE 117
>gi|108803319|ref|YP_643256.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
gi|108764562|gb|ABG03444.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
Length = 440
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A L+ ++ +VL + R S + G ++ + K ++ F
Sbjct: 51 LSSMGQIDVKGPGAERLLRRLLVNEVLDMQPGQLRYSTMCNEAGGVVDDVTVYKFSDEHF 110
Query: 66 ILE---------------------------------------IDRSKRDSL-----IDKL 81
++ + R + + ++++
Sbjct: 111 MVVASSAPRLKSYRWIREHAEGSSAYVTDMTAGIALLAVQGPLSRPLLEGVVEGAELERM 170
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
F++ + + + + E + D+ + D LL R E +
Sbjct: 171 RFFR-FAACRVGEVEVIVSRSGYTGELGYEVYVPADQAREVWDFLLERG-KEFELKPYGV 228
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ LRI + D P ++ I K +IG+E + +Q R I R
Sbjct: 229 EAMQSLRIEKALPLYGPDISEEHT-PFHVGLERW--IRFEKPDFIGREALLGVQRRGIER 285
Query: 202 KRPMIITGTDDLPPSGSPIL-----TDDIEIGTLGVVVGKKALAIARIDK 246
+ ++ ++ +G I E+ G G A+ ++
Sbjct: 286 RWVGLVLESEVPASNGDAIYSIADVASYREVIETGAEAGHYEEALLPGER 335
>gi|315505112|ref|YP_004083999.1| glycine cleavage system t protein [Micromonospora sp. L5]
gi|315411731|gb|ADU09848.1| glycine cleavage system T protein [Micromonospora sp. L5]
Length = 375
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 51/275 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V G A L + + +P AR + + G +L + ++ + +
Sbjct: 55 LSHMGQLEVSGPEAPTALNYALVGHLSAVPIGGARYTMLCDAAGGVLDDLVAYRLASNRY 114
Query: 66 ILEIDRS----KRDSLIDKLLFYKLRS------NVIIEIQPINGVVLSWNQEHT------ 109
+L ++ ++ + Y + II +Q + T
Sbjct: 115 LLVVNAINTRVVHAAIRTRCADYAAWAADRTNERAIIAVQGPRAAPIVEALTGTGLTRLR 174
Query: 110 --FSNSSFIDERFSIADVLLH----------------RTWGHN-------EKIASDIKTY 144
+ ID R ++ + RTW + +
Sbjct: 175 YYTAALLDIDGRPAVVARTGYTGEDGFELLVHAEDAVRTWEAALVAGRRHGLTPTGLACR 234
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LRI G+ + + P DA + + +S K G ++G+ ++ + R+
Sbjct: 235 DTLRIEAGMPLYGAEIGRD-VTPFDAGLGRV--VSFVKPGDFVGRAALAEAHKSGVTRRL 291
Query: 204 PMIITGTDDLPPSGSPILT------DDIEIGTLGV 232
++ +P +G ++T +G +
Sbjct: 292 VGLVASGQRIPRAGQQVVTLTDDGHGADPVGLITS 326
>gi|256828473|ref|YP_003157201.1| glycine cleavage system T protein [Desulfomicrobium baculatum DSM
4028]
gi|256577649|gb|ACU88785.1| glycine cleavage system T protein [Desulfomicrobium baculatum DSM
4028]
Length = 360
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 89/281 (31%), Gaps = 51/281 (18%)
Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86
+T ++ TL R +L +G +L ++ +++ + ++L ++ + DS + + L
Sbjct: 72 VTHNLATLAPGKCRYGFLLNEKGGVLDDLIVYRLDTEKYMLVVNGACIDSDFAWIKSH-L 130
Query: 87 RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---------------------------- 118
+N+ + Q + + +F + I
Sbjct: 131 PANLTLVNQSFDIAKIDLQGPESFDVLARIMPADWNSLGYFGFREVEFEGFKVIVSRTGY 190
Query: 119 ----------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
+ A+VL + + + LR+ G+ D P
Sbjct: 191 TGELGCEFYLPWGKAEVLWEKLMADEAVRPAGLGARDTLRLEVGLPLYGQDLDMDHT-PV 249
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG-SPILTDDIEI 227
+A G+ ++ YIG+ + +R++ + + + + ++
Sbjct: 250 EAGY---GGMLKSEADYIGKSGL------GSVREKLIGLCIDGRRSARHYDEVYAGEEKV 300
Query: 228 GTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRVKAS 267
G + +L + V + + T+ G R
Sbjct: 301 GMVTSGSIAPSLGYCVAMAFVRADMADTESFTIKGPRTTLE 341
>gi|126657632|ref|ZP_01728787.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
CCY0110]
gi|126621088|gb|EAZ91802.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
CCY0110]
Length = 369
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 103/297 (34%), Gaps = 45/297 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ P LQ+++ +D+ L A+ + +L P G I+ +I E+ +
Sbjct: 58 SHMGKFTLEGEGLFPMLQSLVPSDLNRLTPGKAQYTVLLNPDGGIIDDIIIYCQGEEKAV 117
Query: 67 LEIDRSKRDSLIDK---------LLFYKL-RSNVIIEIQPINGV---------------V 101
+ ++ + +D + F L + V++ IQ
Sbjct: 118 IIVNAATKDKDKKWILSNLGSTNINFTDLSQDKVLLAIQGPETAETLQPLVKADLTQLSF 177
Query: 102 LSWNQEHTFSNSSFIDER------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+FI L R+ + LR+
Sbjct: 178 FGHTDTKVLGYPAFIARTGYTGEDGFEVMISPEGGQELWRSLLETGVTPCGLGARDTLRL 237
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ D T P +A + L + KG ++G+EV+ + +++R + +
Sbjct: 238 EAAMSLYGQDIDDHTT-PLEAGLKWLVHLD-KKGKFMGREVLEKQAEEG-VKRRLVGLEM 294
Query: 210 TD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
+ G P++++D +G + KA+A+A + + I + + + G
Sbjct: 295 EGRHIARHGYPVVSEDKIVGEVTSGTIGPTVGKAIALAYVPRSLSKIGTTVEVEIRG 351
>gi|294142303|ref|YP_003558281.1| glycine cleavage system T protein [Shewanella violacea DSS12]
gi|293328772|dbj|BAJ03503.1| glycine cleavage system T protein [Shewanella violacea DSS12]
Length = 364
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 97/309 (31%), Gaps = 48/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVTGTDACVFLRKLLANDVAKLKIPGKALYGGMLDHSAGVIDDLITYYLTDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123
+ ++ + R+ + + +V+I +P ++ +S D+ ++
Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVISERPELAMIAVQGPNAKAKAASVFNADQNAAVE 169
Query: 124 DV----------------------------------LLHRTWGHNEKIASDIKTYHELRI 149
+ +L + + LR+
Sbjct: 170 GMKPFFGVQSGSLFIATTGYTGETGYEIIVPEAEAEVLWQALLEAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M + G+E ++ I+ + +I+
Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPEDRNFNGREALAAIKAAGTEKMVGLIMEA 288
Query: 210 TDDLPPSGSPILTDDI--------EIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
+ P S TD GT +G ++A+AR+ + + +
Sbjct: 289 KGVIRPGMSIFFTDGEGNEQQGIITSGTFSPTLG-YSIAMARVPRSIGD-TAEVEMRKKR 346
Query: 262 VRVKASFPH 270
V VK P
Sbjct: 347 VTVKVIKPS 355
>gi|167969393|ref|ZP_02551670.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis H37Ra]
gi|215427584|ref|ZP_03425503.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T92]
gi|215431145|ref|ZP_03429064.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis EAS054]
gi|219558190|ref|ZP_03537266.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T17]
gi|254232364|ref|ZP_04925691.1| aminomethyltransferase gcvT (glycine cleavage system T protein)
[Mycobacterium tuberculosis C]
gi|254551250|ref|ZP_05141697.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260187207|ref|ZP_05764681.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis CPHL_A]
gi|260201327|ref|ZP_05768818.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T46]
gi|294993596|ref|ZP_06799287.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis 210]
gi|297634800|ref|ZP_06952580.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis KZN 4207]
gi|297731791|ref|ZP_06960909.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis KZN R506]
gi|306776463|ref|ZP_07414800.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu001]
gi|306780240|ref|ZP_07418577.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu002]
gi|306784987|ref|ZP_07423309.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu003]
gi|306789354|ref|ZP_07427676.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu004]
gi|306803949|ref|ZP_07440617.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu008]
gi|306968347|ref|ZP_07481008.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu009]
gi|306972575|ref|ZP_07485236.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu010]
gi|307080283|ref|ZP_07489453.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu011]
gi|307084870|ref|ZP_07493983.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu012]
gi|313659125|ref|ZP_07816005.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis KZN V2475]
gi|54037176|sp|P64221|GCST_MYCBO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54041302|sp|P64220|GCST_MYCTU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|124601423|gb|EAY60433.1| aminomethyltransferase gcvT (glycine cleavage system T protein)
[Mycobacterium tuberculosis C]
gi|308215102|gb|EFO74501.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu001]
gi|308326856|gb|EFP15707.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu002]
gi|308330209|gb|EFP19060.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu003]
gi|308334046|gb|EFP22897.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu004]
gi|308349329|gb|EFP38180.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu008]
gi|308354039|gb|EFP42890.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu009]
gi|308357981|gb|EFP46832.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu010]
gi|308361915|gb|EFP50766.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu011]
gi|308365578|gb|EFP54429.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu012]
Length = 367
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 349 GRAVECQVVCPP 360
>gi|320108243|ref|YP_004183833.1| glycine cleavage system T protein [Terriglobus saanensis SP1PR4]
gi|319926764|gb|ADV83839.1| glycine cleavage system T protein [Terriglobus saanensis SP1PR4]
Length = 375
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 104/321 (32%), Gaps = 69/321 (21%)
Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I++ G A+ Q ++ D L A SA+LTP+G + ++ K+ E+
Sbjct: 54 SHMGDIQLRGPGSLDAV---QKLLMNDASKLQIGQAHYSAMLTPEGTFVDDVVLHKLSEN 110
Query: 64 TFILEIDRSKRDSLIDKLL----------------FYKLRSNVII--------------- 92
+++ I+ R+ + + Y + + I
Sbjct: 111 DYLIVINAGTREKDVQWVRQTIGQMPSTHINDYSDMY---TQIAIQGPRSIDVLQKLTDT 167
Query: 93 -------------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK--- 136
++ + V+++ + + +
Sbjct: 168 DLSTIKNYWFTWGKVAGLYNVMIARTGYTGEDGFEIYIPSDEATSARVWQEIFAAGEEFG 227
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ + + LR+ + + TI +A + + + ++G+ + IQ
Sbjct: 228 ILPCGLGARNTLRLESSMALYGHEI-SDTINVFEANLGRYCKLD-KESDFVGKSALQTIQ 285
Query: 196 HRNIIRKRPMIITGTD-DLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKV 247
+ +++ + + + + G P+ T D IG + ALA +
Sbjct: 286 NAGGPKRKLVGLEIVERGIARDGYPVTTLDGTVIGEVTSGSPSVTLKKNIALAYVPVKYT 345
Query: 248 DHAIKKGMALTVHGVRVKASF 268
A+ +A+T+ VKA
Sbjct: 346 --ALDTEVAVTIRNQPVKAKV 364
>gi|308373355|ref|ZP_07431981.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu005]
gi|308374525|ref|ZP_07436371.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu006]
gi|308375813|ref|ZP_07445189.2| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu007]
gi|308337854|gb|EFP26705.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu005]
gi|308341613|gb|EFP30464.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu006]
gi|308345020|gb|EFP33871.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis SUMu007]
gi|323719111|gb|EGB28256.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CDC1551A]
Length = 364
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 52 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 111
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 112 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 171
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 172 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 231
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 232 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 287
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 288 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 345
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 346 GRAVECQVVCPP 357
>gi|15609348|ref|NP_216727.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis H37Rv]
gi|15841702|ref|NP_336739.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis CDC1551]
gi|31793390|ref|NP_855883.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
bovis AF2122/97]
gi|121638092|ref|YP_978316.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662028|ref|YP_001283551.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis H37Ra]
gi|148823418|ref|YP_001288172.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis F11]
gi|224990586|ref|YP_002645273.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798724|ref|YP_003031725.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 1435]
gi|254365007|ref|ZP_04981053.1| aminomethyltransferase gcvT (glycine cleavage system T protein)
[Mycobacterium tuberculosis str. Haarlem]
gi|289443718|ref|ZP_06433462.1| glycine cleavage system T protein [Mycobacterium tuberculosis T46]
gi|289447839|ref|ZP_06437583.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CPHL_A]
gi|289554002|ref|ZP_06443212.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 605]
gi|289570327|ref|ZP_06450554.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T17]
gi|289750805|ref|ZP_06510183.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T92]
gi|289754319|ref|ZP_06513697.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis EAS054]
gi|1237064|emb|CAA94254.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T
protein) [Mycobacterium tuberculosis H37Rv]
gi|13881958|gb|AAK46553.1| glycine cleavage system T protein [Mycobacterium tuberculosis
CDC1551]
gi|31618982|emb|CAD97087.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T
protein) [Mycobacterium bovis AF2122/97]
gi|121493740|emb|CAL72215.1| Probable aminomethyltransferase GcvT (Glycine cleavage system T
protein) [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|134150521|gb|EBA42566.1| aminomethyltransferase gcvT (glycine cleavage system T protein)
[Mycobacterium tuberculosis str. Haarlem]
gi|148506180|gb|ABQ73989.1| aminomethyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148721945|gb|ABR06570.1| aminomethyltransferase gcvT (glycine cleavage system T protein)
[Mycobacterium tuberculosis F11]
gi|224773699|dbj|BAH26505.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253320227|gb|ACT24830.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 1435]
gi|289416637|gb|EFD13877.1| glycine cleavage system T protein [Mycobacterium tuberculosis T46]
gi|289420797|gb|EFD17998.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis CPHL_A]
gi|289438634|gb|EFD21127.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 605]
gi|289544081|gb|EFD47729.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T17]
gi|289691392|gb|EFD58821.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis T92]
gi|289694906|gb|EFD62335.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis EAS054]
gi|326903824|gb|EGE50757.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis W-148]
gi|328458487|gb|AEB03910.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis KZN 4207]
Length = 379
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 361 GRAVECQVVCPP 372
>gi|325914118|ref|ZP_08176471.1| aminomethyltransferase [Xanthomonas vesicatoria ATCC 35937]
gi|325539621|gb|EGD11264.1| aminomethyltransferase [Xanthomonas vesicatoria ATCC 35937]
Length = 369
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 1/142 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A S +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVVDLHGARVRDFLRYLLANSVDKLKVSGKALYSCMLNPQGGVIDDLIVYFMAEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + R V +E + ++ +D A
Sbjct: 110 RLVVNAATREKDLHWIGEQAARFEVRVEERSDFAMIAVQGPNACAKVIDLLDPSDVTATS 169
Query: 126 LLHRTWGHNEKIASDIKTYHEL 147
L R + I +
Sbjct: 170 KLGRFAALQTRSRDGIDLFLAR 191
>gi|226323775|ref|ZP_03799293.1| hypothetical protein COPCOM_01550 [Coprococcus comes ATCC 27758]
gi|225207959|gb|EEG90313.1| hypothetical protein COPCOM_01550 [Coprococcus comes ATCC 27758]
Length = 362
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 106/310 (34%), Gaps = 56/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ LQ I+T D + AR S + G + ++ K +D +
Sbjct: 51 SHMGEILCEGKDALVNLQHILTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRSDDHYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH--------TFSN----- 112
+ ++ + +D +L ++ V ++ G + + T N
Sbjct: 111 IVVNAANKDKDYQWMLAHQ-SGEVTFTDVSDQYGQIALQGPKAMEILRKLTTEENIPKKY 169
Query: 113 -SSFIDERFSIADVLLHRTWGHNEK-----IASDIKT--YH------------------- 145
+ + ++ +T E +ASD+ +
Sbjct: 170 YHAVFGAEVAGMPCIVSKTGYTGEDGVEIYLASDLAEKMWETLLEAGKEEGLIPCGLGAR 229
Query: 146 -ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR--K 202
LR+ + + + P + ++ G+ + K +IG++ + + R + +
Sbjct: 230 DTLRMEAAMPLYGHEM-DDEVSPLETGLNF--GVKMKKDEFIGKKAI---EDRGTPKIER 283
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
+ +TG + + D +IG +A+A +D AI +
Sbjct: 284 IGLKVTGRG-IIREHQDLYAGDQKIGHTTSGTHCPYLGYPIAMALVDAGSVAIGDKVEAD 342
Query: 259 VHGVRVKASF 268
V G RV+A
Sbjct: 343 VRGRRVEAEV 352
>gi|241668989|ref|ZP_04756567.1| glycine cleavage system aminomethyltransferase T [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254877521|ref|ZP_05250231.1| glycine cleavage system aminomethyltransferase T [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254843542|gb|EET21956.1| glycine cleavage system aminomethyltransferase T [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 358
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 44/302 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + GK A FL+ I+ DV L A+ +L + I+ + KI+ + F
Sbjct: 49 SHMLAVDIQGKDAEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------EHTFSN-------- 112
+ ++ R+S + +V I Q +V +HT +
Sbjct: 109 IVVNAGNRESDVAWFRENSQDLDVKITPQQNLAIVAVQGPKAVEIVKHTVTTEVAEEIAK 168
Query: 113 ---------SSFIDERFSIADVLLHRTWGHNEKIA-------------SDIKTYHELRIN 150
S+++ R +++A + + LR+
Sbjct: 169 LKPFTFKFFSNWMFARTGYTGEDGFEIMLPADQVADFWDNLLENGAEPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ +D T P + + +S +IG++ + I K ++ +
Sbjct: 229 AGMHLYGSDMNT-TTTPLERGLGWSVDLSDENRDFIGKKAYLAKKSHGITTKWTGVVLKS 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIK-KGMALTVHGVR 263
+ +G I D+ E G + ALA + + + +G L V V+
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIALAYVPKEGANPIVNIRGKELEVELVK 347
Query: 264 VK 265
K
Sbjct: 348 AK 349
>gi|215446440|ref|ZP_03433192.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T85]
Length = 367
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTEVLTALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 349 GRAVECQVVCPP 360
>gi|146312964|ref|YP_001178038.1| glycine cleavage system aminomethyltransferase T [Enterobacter sp.
638]
gi|166989728|sp|A4WE57|GCST_ENT38 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|145319840|gb|ABP61987.1| aminomethyltransferase [Enterobacter sp. 638]
Length = 364
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119
L ++ + R+ + + + + V I ++ ++ + + F DE+
Sbjct: 110 RLVVNSATREKDLSWISQHAEKYAVEITVRDDLSLIAVQGPNAQAKAATLFTDEQ 164
>gi|108758135|ref|YP_631249.1| glycine cleavage system aminomethyltransferase T [Myxococcus
xanthus DK 1622]
gi|108462015|gb|ABF87200.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
Length = 362
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 90/307 (29%), Gaps = 48/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A+ + A+I+ D+ + A + +L +G + + + +
Sbjct: 52 SHMGEVEFSGPGALDTVNALISNDLARVADGQAVYAGLLDERGTFVDDVVAYRFSPERIF 111
Query: 67 LEIDRSKRDSLIDKLLFYKL------RSN--VIIEIQPINGVVLSWNQEHTF----SNSS 114
+ ++ S R+ + + + RS+ I +Q L T
Sbjct: 112 ICVNSSNREKDVAWMKAHAKGVAPVDRSDDYAQIAVQGPKATGLVQRLTKTDLSKIGTYR 171
Query: 115 FIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDPNTDF------- 160
F + + A L+ RT E + + L + G D
Sbjct: 172 FAEGEVAGAKCLISRTGYTGEDGFELYSAAGDAVALWDAL-LTEGQQDGVKPCGLGARDS 230
Query: 161 -------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ +A + + + L K +IG+E + + + RK
Sbjct: 231 LRTEMKYALYGNDIDDQHTALEAGLGWI--VKLDKAAFIGKEALVAQKAAGVKRKLVGFE 288
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261
+P G IL D +G + V + + + +
Sbjct: 289 LTGSGIPRHGYAILKDGAPVGEVTSGTMGPTVKKAIGIGYVPTELSTEGSTFDVDIRGRA 348
Query: 262 VRVKASF 268
V
Sbjct: 349 VPAVVVK 355
>gi|269966653|ref|ZP_06180732.1| aminomethyltransferase [Vibrio alginolyticus 40B]
gi|269828720|gb|EEZ82975.1| aminomethyltransferase [Vibrio alginolyticus 40B]
Length = 376
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 103/310 (33%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 58 SHMGQLRLIGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117
+ ++ + + I L + L S V +E ++ + S F+D
Sbjct: 117 VVVNAACKAQDIAHLQAH-LPSGVELETIEDRALLAIQGPKAAAVLVRFAPEVSEMLFMD 175
Query: 118 ER---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R A+ L + +E + LR+
Sbjct: 176 IRKVDILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 236 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 295
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G + D ++IG + ++ R D + +
Sbjct: 296 LVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTEVFAEVR 355
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 356 GKMLPMTVEK 365
>gi|254283104|ref|ZP_04958072.1| sarcosine dehydrogenase [gamma proteobacterium NOR51-B]
gi|219679307|gb|EED35656.1| sarcosine dehydrogenase [gamma proteobacterium NOR51-B]
Length = 817
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/323 (16%), Positives = 99/323 (30%), Gaps = 69/323 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ S V G+ A +L I T +V +P + + L +G I ++++EED+F
Sbjct: 487 LSSFSKFLVQGRDAAKYLNWICTNEVD-VPNGRSVYTQWLNERGTIEADLTVTRLEEDSF 545
Query: 66 ILEIDRSKRDSLIDKLL----------------FYKL--------RS---NVIIEIQPIN 98
++ + L Y + R+ +
Sbjct: 546 LVVTAAFTYTHVFYWLKQNIRDGEFVTVTDVTTTYGVLSVQGPSSRALLEKMSGSPLSNE 605
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDI 141
W ++ ++ R S L + +E +A
Sbjct: 606 IHPFGWMRDIDIGYATVKALRISYVGELGWELYIPSEYLAYIFDELMEAGDEFGLRLCGY 665
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL-----TKGCYIGQE-VVSRIQ 195
+ LR+ + D +G+ G ++G E + R
Sbjct: 666 HALNSLRLEKAFREWGHDIGSDD-------DQRESGLMFAAKLEKAGGFLGAEALQQRRN 718
Query: 196 HRNIIRKRP--MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDK- 246
+ + KR ++ + L PIL + +G G AL R D
Sbjct: 719 NDQKLTKRLVQFLMKSPEPLLYHNEPILCNGERVGYTSSAAYGHTLGGSVALGYVRHDAG 778
Query: 247 VDHAI--KKGMALTVHGVRVKAS 267
VD + + + V GVR +A
Sbjct: 779 VDGDLISQSKFEIVVAGVRHEAH 801
>gi|118602893|ref|YP_904108.1| glycine cleavage system aminomethyltransferase T [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|118567832|gb|ABL02637.1| aminomethyltransferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 358
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ S + G A FLQ +I DV L A S +L G ++ +I +++ +
Sbjct: 49 SHMSVVDFKGIEAKAFLQILIANDVDKLKIQGKALYSCMLNESGGVIDDLIIYYQDDEYY 108
Query: 66 ILEIDRSKRD 75
+ I+ +
Sbjct: 109 RIVINAGTAE 118
>gi|294631503|ref|ZP_06710063.1| glycine cleavage system T protein [Streptomyces sp. e14]
gi|292834836|gb|EFF93185.1| glycine cleavage system T protein [Streptomyces sp. e14]
Length = 375
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 96/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ D+ ++ AR + I G IL ++ ++ E
Sbjct: 56 LSHMGEIAVTGPEAAALLNHALV-GDIASVGVGRARYTMICREDGGILDDLIVYRLAETE 114
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+++ + S ++D L + + + ++ S D +
Sbjct: 115 YLVVANASNAQVVLDALTERAAGFDAEVRDDRDAYALLAVQGPASPAILQSLTDADLAGL 174
Query: 124 -------------DVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
L+ RT E A K +
Sbjct: 175 KYYAGLPGTVAGVQALIARTGYTGEDGFELFVAPADAEKLWQALTDAGADAGLIPCGLSC 234
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR- 201
LR+ G+ + ++ P DA + + + K G ++G+E + R R
Sbjct: 235 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFGKEGDFVGREALRRAAERAAENP 291
Query: 202 -KRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
+ + + +P +G P++ IG + L A+A +D A
Sbjct: 292 PRVLVGLVAEGRRVPRAGYPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 346
>gi|271963294|ref|YP_003337490.1| glycine cleavage system aminomethyltransferase T [Streptosporangium
roseum DSM 43021]
gi|270506469|gb|ACZ84747.1| glycine cleavage system aminomethyltransferase T [Streptosporangium
roseum DSM 43021]
Length = 362
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 53/305 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A L + + L AR + I+ P G +L ++ ++ ++ F
Sbjct: 49 LSHMGEIFVTGPQAGEALDYALVGHLSALEPGRARYTMIVDPSGGVLDDLIVYRLADEEF 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNV---------------------------IIEIQPIN 98
++ + S + +L R+ + ++
Sbjct: 109 MVVANASNYPRVAAELTE---RAKAFDAAVEDRSEQYALVAVQGPHSRAILGELTDADLD 165
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDI 141
G+ T + + R + + + + +
Sbjct: 166 GLKYYAGLPATVAGREALVARTGYTGEDGFELFVAADDAEPLWAALTEAGEPYGLLPAGL 225
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200
LR+ G+ + + + P DA + + + K G ++G+ + ++
Sbjct: 226 SARDTLRLEAGMPLYGNEL-SADLTPFDAGLGRV--VRFDKPGDFVGRAALEPLKDVPPS 282
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALT 258
R+ ++ +P G P++ D +G + ++L + VD + G+A+
Sbjct: 283 RRLVGLVATGRRVPRHGYPVVSADGAVVGEVTSGAPSQSLGRPIAMAYVDGDLSTGLAVD 342
Query: 259 VHGVR 263
+ G R
Sbjct: 343 IRGSR 347
>gi|225386602|ref|ZP_03756366.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme
DSM 15981]
gi|225047300|gb|EEG57546.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme
DSM 15981]
Length = 366
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 54/309 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A+ L ++T D + AR S + +G ++ ++ K+ +D +
Sbjct: 56 SHMGEIILKGPDALKNLNHLLTNDYTVMACGQARYSPMCNEEGGVVDDLIVYKVRDDCYF 115
Query: 67 LEIDRSKRDSLIDKLL--------------------------FYKLRSNVIIEIQ----- 95
+ ++ + +D + LR V E
Sbjct: 116 IVVNAANKDKDYAWMKAHVSGEAQLSDISASVAQLALQGPKAMDILR-KVAREEDIPEKY 174
Query: 96 ---------PINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTY 144
++S E LL I +
Sbjct: 175 YTCKFHCTIDGMDCIISKTGYTGEDGVEIYLASEDAPRLWRLLMEHGRDEGLIPCGLGAR 234
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN-IIRKR 203
LR+ + + I P +A + + + + K +IG++ + + + + RKR
Sbjct: 235 DTLRLEASMPLYGHEM-DDAITPKEAGLGMF--VKMDKEDFIGKKAI---EAKGPLTRKR 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+ + + IG +A+A +D + + V
Sbjct: 289 VGLKVTGRGIVREHQAVYAGGEPIGVTTSGTHCPYLGYPVAMALLDIAYKEPGTAVEVDV 348
Query: 260 HGVRVKASF 268
G RV A
Sbjct: 349 RGRRVAAEI 357
>gi|221059411|ref|XP_002260351.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810424|emb|CAQ41618.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 531
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 43/134 (32%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT----------------------------- 33
L N++ +++CG + FLQ++ T D+
Sbjct: 6 LCRLKNRTLVQICGTDSFRFLQSLTTNDLNKIITEKDFSLYKNIPKNVLSSLDGTNSYQL 65
Query: 34 ----LPYKIAR---GSAILTPQGKILLYFLISKI----EEDT---FILEIDRSKRDSLID 79
+ +K S L GKIL + + EE+T F ++ + L+
Sbjct: 66 CGHNVNHKKWTKGLPSLFLQNNGKILADCFLYNVKYTNEENTFSLFYMDCNMDASRMLLS 125
Query: 80 KLLFYKLRSNVIIE 93
L KL +V
Sbjct: 126 LLEKRKLSCDVHFS 139
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 153 IVDPNTD---FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ D F + P D D LN ++ KGCY+GQE ++R ++ I K
Sbjct: 325 VAKGKIDRDAFKFKDLSPFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINK 377
>gi|254373931|ref|ZP_04989413.1| aminomethyltransferase [Francisella novicida GA99-3548]
gi|151571651|gb|EDN37305.1| aminomethyltransferase [Francisella novicida GA99-3548]
Length = 358
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 47/306 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K+ ++ F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ ++ R+S + +V I Q +V +
Sbjct: 109 IVVNAGNRESDVACFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEA 168
Query: 111 -------SNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRIN 150
S ++ R + N + + LR+
Sbjct: 169 LLPFSFKFFSKWMVARTGYTGEDGFEVILPATQVKKFWDSLLENGAQPAGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ + D ST P + + +S +IG++ + + + K ++ T
Sbjct: 229 AGMHLYSADMDTSTT-PLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKT 287
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRV 264
+ +G I D+ E G + LA A + + + V
Sbjct: 288 KGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEV 343
Query: 265 KASFPH 270
+ P
Sbjct: 344 ELVKPK 349
>gi|84514576|ref|ZP_01001940.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella
vestfoldensis SKA53]
gi|84511627|gb|EAQ08080.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella
vestfoldensis SKA53]
Length = 812
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 91/318 (28%), Gaps = 64/318 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIAR----GSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A FL + +A + L + I ++++
Sbjct: 487 MSSFGKIRVEGRDACAFL-----NHICGAQMDVAVGRIVYTQFLNAKAGIEADVTVTRLS 541
Query: 62 EDTFILEIDRSKRDSLIDKLLF----Y------------KL-------RS---NVIIEIQ 95
E +++ + R + + Y L R+ V
Sbjct: 542 ETAYLVVTPAATRLADQTWMQRNLGDYTAVITDVTAGEGVLAVMGPHSRALLQKVSPNDF 601
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------- 145
+ QE + R S L + + + H
Sbjct: 602 SNDHNPFGTAQEIEIGMALARVHRVSYVGELGWEVYISADMAGHVFEVLHAAGQDMGLKL 661
Query: 146 -------ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
R+ G D +A + + K +IG++ V R +
Sbjct: 662 CGMHMMDAARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPVFIGRDAVLRKRDAG 718
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDH 249
+ R+ +T L P+L D +G L AL + + + VD
Sbjct: 719 LARRLLQFKLTDPAPLLYHNEPVLRDGRVVGHLTSGGYGHHVGAALGMGYVPCAGESVDD 778
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + V GVRV A
Sbjct: 779 LLASRYEIDVMGVRVVAE 796
>gi|253988640|ref|YP_003039996.1| glycine cleavage system aminomethyltransferase T [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|211638036|emb|CAR66664.1| aminomethyltransferase (ec 2.1.2.10) (glycine cleavage system
protein) [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253780090|emb|CAQ83251.1| aminomethyltransferase [Photorhabdus asymbiotica]
Length = 367
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ D+ L A + +L G ++ ++ D +
Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYFSHDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
+ ++ + R+ + + + +V I+++ ++ E S +++
Sbjct: 110 RMVVNSATREKDLAWINEHATHYSVDIQVRDDLALIAIQGPEAQAKVQSLLNDEQKQAIA 169
Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + LR+
Sbjct: 170 GMKPFFGIQADELFIATTGYTGEAGYEIAMPKEQAANFWQKLLSAGIKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D TI P A M +IG+E + R + + ++
Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTIAWKPEDRQFIGREALERQRKEGTD-QLVGLVMR 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ SG + D E+GTL V +A+AR+ + + +
Sbjct: 288 EKGVLRSGLTVSFTD-EMGTLHSGVITSGTFSPTLGFSIALARV-PQGIGEQAIVQIRHR 345
Query: 261 GVRVKASFP 269
+ V+ P
Sbjct: 346 EMPVQVVKP 354
>gi|297566415|ref|YP_003685387.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946]
gi|296850864|gb|ADH63879.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946]
Length = 350
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 53/272 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ DV L A+ S + +G ++ + + E+ +++ ++ +
Sbjct: 56 VRGPQALDFLQYATLNDVSKLKVGRAQYSMLPNERGGVVDDIYLYRTGEEEYLVVVNAAN 115
Query: 74 RDSLIDKLLF----YKLR------------------SNVIIEIQPINGVVLSWNQEHTFS 111
+ L + +R + V+ ++ ++ + S + TF+
Sbjct: 116 IEKDWSHLQRLAEGFSVRLEDASERTGLLAVQGPNAAKVLQKLCDVD--LSSKKKNDTFT 173
Query: 112 NSSFIDE-RFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRINHGIV 154
+ R + + + + LR+ G
Sbjct: 174 ATVAGKPARLARTGYTGEDGFELFTEATDLRAVWDALLQAGVTPCGLGARDTLRLEAGFP 233
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+ P + + K Y +++ + + + + +P
Sbjct: 234 LYGHELT-DETNPRCTPFSWV--VKEHKEFYGKSALLA-----GGCDQVLVGLLLEEGIP 285
Query: 215 PSGSPILTDDIEIGTLGVV----VGKKALAIA 242
G +L E+G + + KK +A+A
Sbjct: 286 REGYRVLVGGEEVGHITSGTFSPLIKKGIALA 317
>gi|215403601|ref|ZP_03415782.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis 02_1987]
Length = 367
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGR--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 290
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 291 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 348
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 349 GRAVECQVVCPP 360
>gi|55376913|ref|YP_134764.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula
marismortui ATCC 43049]
gi|55229638|gb|AAV45058.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula
marismortui ATCC 43049]
Length = 857
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 83/267 (31%), Gaps = 50/267 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
++V G A F+Q + T D+ + + + + G + +++ +ED ++L
Sbjct: 550 MEVIGSDAGEFVQYLCTNDMD-IDVGDVKYTLMCNEGGGVRADITVTRTDEDRYLLLTTG 608
Query: 68 ----------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105
++ S + K+ S V + +
Sbjct: 609 REVGNNHVAWVREQSPDDVVVNDVTSSLAAMVCTGPNARKVLSKVTDVDLSDDAFPFFTS 668
Query: 106 QEHTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASDI-------KTYHELR 148
Q+ N R S A L R W H + + + LR
Sbjct: 669 QQFFVKNIPVTALRVSYAGELGWEFYTPSEYGERLWEHIMEAGEEYGIRPYGNGALNSLR 728
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G D P++A + + L +IG+E V+ + I + +T
Sbjct: 729 IEKGFRLWGKDLHTEH-NPYEAGLGW--AVDLETD-FIGKEAVAAAADGDNIDHKVACLT 784
Query: 209 GTDDLPPS--GSPILTDDIEIGTLGVV 233
D+ P+L D IG L
Sbjct: 785 LDDEDAVVLDNKPVLDGDETIGYLHSA 811
>gi|289758331|ref|ZP_06517709.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T85]
gi|289713895|gb|EFD77907.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis T85]
Length = 379
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTEVLTALGLPTEMDYMGY 186
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 361 GRAVECQVVCPP 372
>gi|134142796|gb|ABO61732.1| mitochondrial glycine decarboxylase complex T-protein [Populus
tremuloides]
Length = 408
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 86/269 (31%), Gaps = 54/269 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK +PFL+ ++ ADV L + +G + +I+K+ +D + ++
Sbjct: 91 SLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNAG 150
Query: 73 ---------------------------------------KRDSLIDKLLFYKLRSNV--- 90
++ L L S V
Sbjct: 151 CKDKDLAHIEAHMKSFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDL-SKVYFG 209
Query: 91 IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
I INGV + E F S + +A L ++ G +
Sbjct: 210 EFRITDINGVRCFINRTGYTGEDGFEISVPSENAVDLAKATLEKSEGKVRLTG--LGARD 267
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D I P +A ++ G +G ++G EV+ + + R
Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLNWAIGKRRKAEGGFLGAEVILKQLAEG-PKIRL 325
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ + T P S S I + IG +
Sbjct: 326 VGFSSTGPPPRSHSEIQDEKGTSIGEITS 354
>gi|113869555|ref|YP_728044.1| glycine cleavage system aminomethyltransferase T [Ralstonia
eutropha H16]
gi|123328791|sp|Q0K5P5|GCST_RALEH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|113528331|emb|CAJ94676.1| Aminomethyltransferase [Ralstonia eutropha H16]
Length = 375
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 19/126 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G + FL+ ++ +V L A S +L +G ++ ++ ED F
Sbjct: 51 SHMCVVDLAGANTRSFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLR-----SNVIIE----------IQPINGVVLSWNQEHTF 110
L ++ S I+ + + R S+V I +QP+ V + T
Sbjct: 111 RLVVNASTALGDIEWI---RARNAATGSDVTITPRREDVAPAGVQPLAIVAVQGPNARTK 167
Query: 111 SNSSFI 116
S+F
Sbjct: 168 VWSTFP 173
>gi|254284012|ref|ZP_04958980.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B]
gi|219680215|gb|EED36564.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B]
Length = 371
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 47/290 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A L+A++ AD+ LP A S +L +G +L +I++ +D+F
Sbjct: 54 SHMGQVVIRGDVATAELEALVPADLAALPDHHAVYSLLLNQEGGVLDDLIITRWADDSFF 113
Query: 67 LEIDRSKRDSLIDKLLFY-------KL-----------RSN-VIIEIQPINGVVLSWNQE 107
L ++ + + +D L + L R+ V+ + P ++
Sbjct: 114 LVVNADCKVADVDHLRAHLPGCSLEVLENRALLAVQGPRAREVLSALCPDAAELVFMTGV 173
Query: 108 HTFSNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+ + + A+ L + LR+ G
Sbjct: 174 EAAIDGVPVYVSCCGYTGEDGFELSIPAAEAERLATLLLDQPGVAPIGLGARDSLRLEAG 233
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKRP-MI 206
+ + ++I P A + + G Y G ++++R I +R +
Sbjct: 234 LCLYGHEL-SASITPIQAGLKWAIAKARRVDGARPGGYPGAQIINRQWREGIGERRVGLR 292
Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHA 250
+ G + IG + V A+A +D
Sbjct: 293 VKGKRPVRDGQLVCDQSGQAIGRISSSAFGASVGAPIAMAFVAVDHATAG 342
>gi|315231347|ref|YP_004071783.1| aminomethyltransferase [Thermococcus barophilus MP]
gi|315184375|gb|ADT84560.1| aminomethyltransferase [Thermococcus barophilus MP]
Length = 397
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ + T D+ P + +L +G + L+ + DT++
Sbjct: 49 SHMGEIFFRGKDALKFLQYVTTNDISRPPAISGTYTLVLNERGAVKDETLVFNMGNDTYM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRS 88
+ D + L R+
Sbjct: 109 MVCDSDAFEKLYAWF-MSIKRA 129
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 17/142 (11%)
Query: 145 HELRINHGIVDPNTDFLP--------STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
LR+ G + + P A ++ I K +IG++ + + +
Sbjct: 248 DTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEF--AIFWDKE-FIGKDALLKQKE 304
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
R + K +P +G + D EIG + +A + +
Sbjct: 305 RGLPSKMVHFKMVDKGIPRAGYKVYKDGKEIGEVTSGTMSPLLGIGIGIAFVKPEYAVPG 364
Query: 251 IKKGMALTVHGVRVKASFPHWY 272
++ + + + P +Y
Sbjct: 365 VEIEIEIRGQKKKAVTVSPPFY 386
>gi|289745484|ref|ZP_06504862.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis 02_1987]
gi|289686012|gb|EFD53500.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis 02_1987]
Length = 379
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK--RPMI 206
G + I P A + K + G+ + + R+ R +
Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGR--AVGWRKDAFFGRAALLAEKAAG-PRRLLRGLR 302
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH-- 260
+ G L P G +L D +G + +A ID D I+ G + V
Sbjct: 303 MVGRGVLRP-GLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDS-DAGIEDGQQINVDVR 360
Query: 261 --GVRVKASFPH 270
V + P
Sbjct: 361 GRAVECQVVCPP 372
>gi|238754574|ref|ZP_04615928.1| Aminomethyltransferase [Yersinia ruckeri ATCC 29473]
gi|238707205|gb|EEP99568.1| Aminomethyltransferase [Yersinia ruckeri ATCC 29473]
Length = 348
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 33 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117
L ++ + R+ + + + N+ I ++ +V + T I
Sbjct: 93 RLVVNSATREKDLAWITQHAESYNISITVRDDLALVAIQGPQAQERVATLLTAEQKQAIA 152
Query: 118 ERFSIADVLL----------------------------HRTWGHNEKIASDIKTYHELRI 149
E + + + + LR+
Sbjct: 153 EMKPFFGIQTGDLFIATTGYTGEAGYEIALPKEQVVDFWQKLLAAGVKPAGLGARDTLRL 212
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + P +A M +IG+E + + + R +
Sbjct: 213 EAGMNLYGQEMDEGVS-PLEANMGWTVAWLPEDRQFIGREALEQQRARGTDKLVGLIMTE 271
Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + +D + ++T TLG +A+AR+ + + +
Sbjct: 272 KGVLRNELPVHFSDAAGNLHTGVITSGSFSPTLGFS-----IALARV-PAGIGEQAVVQI 325
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 326 RNREMPVKVTKP 337
>gi|118486291|gb|ABK94987.1| unknown [Populus trichocarpa]
Length = 408
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 58/313 (18%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++
Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQ 139
Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82
D + ++ RD S++ L
Sbjct: 140 NDHMYIVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASVLQHLT 199
Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + I ING + E F S + +A +L ++ G
Sbjct: 200 KDDL-SKLYFGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKI 258
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G EV+ +
Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILK 315
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVD 248
+ R + T T P S S I + IG + KK +A+ +
Sbjct: 316 QLAEG-PKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGS 374
Query: 249 HAIKKGMALTVHG 261
H + V G
Sbjct: 375 HKAGTKAKILVRG 387
>gi|262202963|ref|YP_003274171.1| glycine cleavage system protein T [Gordonia bronchialis DSM 43247]
gi|262086310|gb|ACY22278.1| glycine cleavage system T protein [Gordonia bronchialis DSM 43247]
Length = 372
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 93/317 (29%), Gaps = 58/317 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A + A +T D+ + A+ + G ++ + + +D
Sbjct: 55 SHLGKALVSGPGAAALVNATLTNDLGRIGPGRAQYTLCCNDSGGVIDDLIAYLVSDDEVF 114
Query: 67 LEIDRSKRDSLIDKLLF---------YKLRSNVIIEIQ-------------PINGVVLSW 104
L + + +++D L + R + + +Q P +++
Sbjct: 115 LIPNAANTAAVVDVLRAAAPDGVTVTDRHRDHAVFAVQGPRSPELLEGLGLPAGMEYMAF 174
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEK--------------------IASDIKTY 144
+ R R + + + +
Sbjct: 175 VDAELVTAGGARPVRVCRTGYTGERGYEILPSWDDAGPVFDTLLDGVRDLGGMPAGLGAR 234
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G + P I P A + K + G++ + + R+R
Sbjct: 235 DTLRTEMGYALHGHELGPE-ITPVQARSSW--AVGWDKPHFGGRDALLAEKEAG-PRRRL 290
Query: 205 MIITGTD-DLPPSGSPILT--DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257
+ T +P + + + IG K+ +A+A ID ++KG +
Sbjct: 291 YGLRATGRGVPRADCEVRSGPGGERIGVCTSGTFSPTLKQGIALALIDTASG-VRKGDEV 349
Query: 258 TVH----GVRVKASFPH 270
++ + + P
Sbjct: 350 SIDVRGRDLPCEVVIPP 366
>gi|224113289|ref|XP_002332617.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex
[Populus trichocarpa]
gi|222832818|gb|EEE71295.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex
[Populus trichocarpa]
Length = 408
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 58/313 (18%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++
Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQ 139
Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82
D + ++ RD S++ L
Sbjct: 140 NDHMYIVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASVLQHLT 199
Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + I ING + E F S + +A +L ++ G
Sbjct: 200 KDDL-SKLYFGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKI 258
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G EV+ +
Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILK 315
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVD 248
+ R + T T P S S I + IG + KK +A+ +
Sbjct: 316 QLAEG-PKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGS 374
Query: 249 HAIKKGMALTVHG 261
H + V G
Sbjct: 375 HKAGTKAKILVRG 387
>gi|319404001|emb|CBI77589.1| glycine cleavage system T protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 373
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 90/279 (32%), Gaps = 41/279 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A FL + D L +R + +L Q IL +++++++ F+
Sbjct: 62 SHMKLIAIEGQEAAEFLSYALPIDAFLLKKGQSRYNYLLNEQAGILDDLILTRLDKYRFM 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF----- 120
L ++ + +L + + I ++ + + +++ +
Sbjct: 122 LVVNAGNAQADFAELQKRAVGFDCKIVALERVLLALQGPQAASVLADAGLLGNELLFMQG 181
Query: 121 --------------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
S A L+ + + LR+ G+
Sbjct: 182 FEPYQDWFVTRSGYTGEDGFEIALSESQARSLVEKLLDDYRVEWIGLAARDSLRLEAGLC 241
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P T P +A + S+ K + G E R + R R +
Sbjct: 242 LHGNDITPDTT-PIEAALTWAVSKSVREKAKFYGAEAFLRAYQKGPSRCRVGLKPQGRQP 300
Query: 214 PPSGSPILTD-DIEIGTLGVV------VGKKALAIARID 245
+G+ +L D +IG + G A+ ID
Sbjct: 301 VRAGAVLLDDKGKQIGIVTSGGFGPSFNGPVAMGYVPID 339
>gi|302527127|ref|ZP_07279469.1| sarcosine oxidase oxidoreductase [Streptomyces sp. AA4]
gi|302436022|gb|EFL07838.1| sarcosine oxidase oxidoreductase [Streptomyces sp. AA4]
Length = 955
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 54/321 (16%), Positives = 96/321 (29%), Gaps = 64/321 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + G ++ + ++ ED F+
Sbjct: 625 STLGKIDVQGPDAAQFLDLLYTNLMSTLKVGRIRYGVMCGVDGMVIDDGTVIRVAEDRFL 684
Query: 67 LEIDRSKRDSLID-----------KLLFYKL--------------RSNVI-------IEI 94
+ ++D L + RS + +E+
Sbjct: 685 VTTTTGNAAMVLDWMEEWLQTEWPHLRVFATSVTEHWATVALVGPRSRELLAGLAPGLEV 744
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIASDI 141
++W ++ + R S + L L
Sbjct: 745 SNEAFGFMTWRDAEVAGIAARV-CRISFSGELAYEINVPSWYGLALWEALAEKGITPYGT 803
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+T H LR G D T+ P D M +S K ++G+ SR ++ R
Sbjct: 804 ETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSW--AVSKKKADFLGKRSFSRAENLRPDR 860
Query: 202 KRPMIITGTDD--LPPSGSPILTDD-------IEIGTLGVVVGKK------ALAIARIDK 246
K+ + + D L P G+ I+ +G + ALA+ R +
Sbjct: 861 KQFVGLLPVDPTVLLPEGAQIIETAHVPRPPVRMLGHVTSSYPSAALDRTFALALVRSGR 920
Query: 247 VDHAIKKGMALTVHGVRVKAS 267
+ + V V +
Sbjct: 921 ERIGETLYVPVGDEVVPVTVT 941
>gi|319783863|ref|YP_004143339.1| glycine cleavage system T protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169751|gb|ADV13289.1| glycine cleavage system T protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 366
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 82/261 (31%), Gaps = 37/261 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A L D L ++ S L G IL +++++ + F+
Sbjct: 55 SHMKLFEVSGPEAAALLNRACPLDAGGLEISQSKLSFFLNEAGGILDDLIVTRLGDARFM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
+ + + L L ++ I+P++ V L+ ++ S
Sbjct: 115 VVANAGNAVADEKHLR--ALAADFDARIEPLDRVFLAIQGPEAWAALSRAGIETGSLLFM 172
Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152
++ R AD L+ + G + + LR+ G
Sbjct: 173 HGVEPRKNWFMSRSGYTGEDGFEIGLPEADARDLVAKLLGDERALWIGLAARDSLRLEAG 232
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D P T ALM + G +IG + + R +KR +
Sbjct: 233 LCLHGQDITPETDPASAALMWAIPKDIRASGTFIGADALRAAVERGPAQKRVGLKPEGRQ 292
Query: 213 LPPSGSPIL-TDDIEIGTLGV 232
G+ + D G +
Sbjct: 293 PVRGGAALFDADGNSAGHVTS 313
>gi|159570532|emb|CAP19396.1| aminomethyltransferase [Danio rerio]
gi|159570761|emb|CAP19587.1| aminomethyltransferase [Danio rerio]
Length = 409
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 86/273 (31%), Gaps = 50/273 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK + F++++I D+ L S +G I+ +++K ++D + +
Sbjct: 95 KVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAG 154
Query: 73 KRDS----LIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
D + +L +K S +V +E + + L D
Sbjct: 155 CADKDSAHMQARLQEFK--SAGHDVDLEFMEESLIALQGPSMARVLQKGVGDDLKKLTFM 212
Query: 118 -----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELR 148
F I + R +E + + LR
Sbjct: 213 TSVLTPVFGIQGCRVTRCGYTGEDGVEISVPSKEVVSLTEKLLADSEVKLAGLGARDSLR 272
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D T P +A + G + + G +++ RKR +I
Sbjct: 273 LEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKAKTPRKRVGLI 331
Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239
+ T +PIL +D IG + L
Sbjct: 332 S-TGPPVRQHTPILSSDGRVIGEVTSGCPSPCL 363
>gi|126733838|ref|ZP_01749585.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2]
gi|126716704|gb|EBA13568.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2]
Length = 832
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 94/318 (29%), Gaps = 64/318 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT----LPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A F+ DV +P + L G I +++I
Sbjct: 507 MSSFGKIRVEGRDATAFM-----NDVGGGDYDVPVGKIVYTQFLNSMGGIEADVTVTRIS 561
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102
E +++ + R + + + NV+I ++ GV+
Sbjct: 562 ELCYLVVTPAATRLADQTWMRRHVGDFNVVITDVTAGEGVLAVMGPNSRKLLEAVSPADF 621
Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH---------- 145
QE R + L + ++ +T H
Sbjct: 622 SNAVNPFGTAQEIEIGMGLARVHRITYVGELGWEVYMSSDMAGHVFETLHDAGQDMGLKL 681
Query: 146 -------ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
R+ G D +A + + K +IG++ V R +
Sbjct: 682 CGMHMMDAARMEKGFRHFGHDITAEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRKRETG 738
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIA--RIDKVDH 249
+ R+ +T + L PI+ D + L + + + V
Sbjct: 739 LERRLVQFKLTDPEPLLYHNEPIVRDGEVVSYLSSGGYGHHLGAAIGMGYVPCKGESVAE 798
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + V G RVKA
Sbjct: 799 LLASDFEIDVMGTRVKAE 816
>gi|313680530|ref|YP_004058269.1| aminomethyltransferase [Oceanithermus profundus DSM 14977]
gi|313153245|gb|ADR37096.1| aminomethyltransferase [Oceanithermus profundus DSM 14977]
Length = 357
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/307 (11%), Positives = 83/307 (27%), Gaps = 52/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ FL+ D L A+ S + +G ++ + + E+ ++
Sbjct: 53 SHMGEFFVRGPQALAFLRWATLNDPAKLKVGRAQYSMLPNDRGGVVDDVYVYRTGEEEYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ + L +V +E +++
Sbjct: 113 VVVNAANVAKDWAHLNALVGSFDVELEDASDAWALMALQGPRAEGALQTLTDTDLSRVRK 172
Query: 110 ----FSNSSFIDERFSIADVLL----------------HRTWGHNEKIASDIKTYHELRI 149
+ + R + R + + LR+
Sbjct: 173 NATLALTVAGVPARIARTGYTGEDGFEIFTAPEDAPAVWRALLEAGATPAGLGARDTLRL 232
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G + +T P + + + Y G+E + +R + +
Sbjct: 233 EAGFPLYGHELTDAT-NPRCTPLAWV----IKDKPYYGREALEAA----ACDERLVGMVM 283
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G P+L G + AL R D + + + + +
Sbjct: 284 ERGIPREGYPVLAGGAPAGRVTSGTQSPVLKKGIALGWVRADLAEEGTELAVEVRGRALP 343
Query: 264 VKASFPH 270
+ P
Sbjct: 344 ARVVRPP 350
>gi|260459854|ref|ZP_05808107.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
gi|259034065|gb|EEW35323.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
Length = 715
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 93/305 (30%), Gaps = 56/305 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G + LQ +T DV L SA+ G ++ + ++ +D F
Sbjct: 385 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 444
Query: 66 IL----EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94
++ KL LR S + I
Sbjct: 445 RWVGGDDLSGEWLRETAKKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVIWTSPLQPSI 504
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142
+ + + + + R L + W EK+ I
Sbjct: 505 DELEWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 564
Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+RI G++ +F T P +A + + +IG+E + R +
Sbjct: 565 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKTKTDDFIGREALIRRKEN 623
Query: 198 NIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIK 252
+ + + ++ G + +IG + V K +A+AR+D A+
Sbjct: 624 PQNK--LVGLDIDSNVAVGHGDCVHVGRAQIGVVTSGMRSPVLNKNIALARLDVTHAAVG 681
Query: 253 KGMAL 257
+ +
Sbjct: 682 TEVEI 686
>gi|224826357|ref|ZP_03699459.1| glycine cleavage system T protein [Lutiella nitroferrum 2002]
gi|224601458|gb|EEG07639.1| glycine cleavage system T protein [Lutiella nitroferrum 2002]
Length = 362
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 90/278 (32%), Gaps = 42/278 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G A +LQ +I DV L A S +L G ++ ++ +
Sbjct: 52 SHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLNADGGVVDDLIVYLTS-YGY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF---------- 115
+ ++ D + + K +V ++++ ++ S
Sbjct: 111 RMVVNAGTTDKDLAWMEQQKAGFDVTLKVRRDLAMLAVQGPNAIAKVCSVKPTLADAIKS 170
Query: 116 --IDERFSIADVLLHRTWGHNEK------IASDIKTY-----------------HELRIN 150
I + D RT E A++ + LR+
Sbjct: 171 LKIFQGLPAGDWFFARTGYTGEDGLEIMVPATEAPAFFRELLAAGVAPIGLGARDTLRLE 230
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D T+ P A M + +IG++ + + + K+ ++
Sbjct: 231 AGMNLYGHDM-DETVSPLAAGMGWTIAWEPAERDFIGRQALEAQKAAGVAMKQVGLVLEG 289
Query: 211 DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
+ G ++ + G + K ++AIAR+
Sbjct: 290 RGVLREGQKVVVEGAGEGVITSGTFSPTLKHSIAIARV 327
>gi|221101861|ref|XP_002156170.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 861
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 51/267 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK A FL ++ + ++ S +L+ GK+ +S + + +++
Sbjct: 535 HITGKDASKFLNYMVANKLPSI--GRTNVSHMLSSTGKVYAEVTVSALAPNHYLVITGGG 592
Query: 73 KRDS----LIDKLLFYKL-----------------RSNV---IIEIQPINGVVLSW--NQ 106
LID Y + RS V + ++ S+ N+
Sbjct: 593 SEYHDLRWLIDHARKYDVQIDNKTDQVSAISINGPRSRVLLQKLTSTDVSDKAFSFMQNK 652
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------DIKTY--HELRI 149
E + R S L + N K + Y + +RI
Sbjct: 653 ELDIGGIPVLALRVSYTGELGWEFYVENSKALDLYIKLLTAGQELNIGHVGAYAINSMRI 712
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP--MII 207
G ++ + P++A +D I L KG ++G++ + R I +KR MI+
Sbjct: 713 EKGFRLWGSEM-NMDVGPYEAGLDFF--IKLDKGDFLGRDALI-SHKRTIQKKRLVCMIV 768
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ P I D IG
Sbjct: 769 QTDNIDPEGDQAIWLGDEVIGNTTSGC 795
>gi|83309865|ref|YP_420129.1| glycine cleavage system aminomethyltransferase T [Magnetospirillum
magneticum AMB-1]
gi|82944706|dbj|BAE49570.1| Glycine cleavage system T protein [Magnetospirillum magneticum
AMB-1]
Length = 371
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 86/266 (32%), Gaps = 44/266 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ L+ ++ D+ L R S QG IL +ISK+ ED
Sbjct: 57 SHMGQASIRGAKAVELLETLVPGDIQALGLGKTRYSVFTNDQGGILDDLMISKLAEDHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------------------IQPINGVV---- 101
L I+ + + + L + L V + + P G +
Sbjct: 117 LVINAACKHADFAHLKAH-LGDKVELSMIEDRSLLALQGPGAAAAMVTLCPEAGAMTFMT 175
Query: 102 -----------LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
L+ +T + I + + L + + + LR+
Sbjct: 176 IAEITVAGIKCLATRSGYTGEDGWEISVANADVETLARAILAAPGVMPAGLGARDSLRLE 235
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMII 207
G+ +D T P +A + + +S + G + G V+ + R+R I
Sbjct: 236 AGLCLYGSDIDT-TTTPVEASIAWI--MSKRRRAEGGFPGAAVIQKQLAEGAPRRRVGIQ 292
Query: 208 TGTDDLPPSGSPILTD-DIEIGTLGV 232
+ + I + +G +
Sbjct: 293 PDGKAPARAHTEITDEAGNRLGEICS 318
>gi|259415784|ref|ZP_05739704.1| sarcosine dehydrogenase [Silicibacter sp. TrichCH4B]
gi|259347223|gb|EEW59000.1| sarcosine dehydrogenase [Silicibacter sp. TrichCH4B]
Length = 800
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 72/271 (26%), Gaps = 53/271 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ I V G A FL + +A+L +G +I E
Sbjct: 485 SSFGKIDVTGPDAEAFLLHVCAGQM-----ARAPGSVIYTAVLNERGTFESDITAQRIAE 539
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW------------------ 104
D + L + + + L + +V I
Sbjct: 540 DHYRLFVGTAAIKRDMAWFLRHGEGYDVSICDTTEEHATFGLMGPEAAKTASAVGAESLT 599
Query: 105 ------NQEHTFSNSSFIDERFSIADVLLH-------------RTWGHNEKIASDIKTYH 145
+ E T + R S R + +
Sbjct: 600 QINYFKHGEATIAGHHIRAARLSYVGEAGWEITCRAAHAQDVYRALTQAGAAPAGLYAQT 659
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
+RI G + S + P D + G +L K G YIG E + + + +
Sbjct: 660 SMRIEKGFCAMGHEL-DSDVTPLDVGL----GFALRKSGGYIGAEAIEEKRKTSTTHQVV 714
Query: 205 MIITGTDDLPPSG-SPILTDDIEIGTLGVVV 234
+I D P G P+ + D IG
Sbjct: 715 SLILDDPDAVPLGHEPVYSGDQIIGHTTSCA 745
>gi|113955074|ref|YP_732040.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CC9311]
gi|123132329|sp|Q0I682|GCST_SYNS3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|113882425|gb|ABI47383.1| glycine cleavage system T protein [Synechococcus sp. CC9311]
Length = 369
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 102/306 (33%), Gaps = 54/306 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61
S+ +++ G + LQ ++ +D+ + A S +L QG I+ +I +
Sbjct: 51 SHMGVLRIEGANPKDALQQLVPSDLHRIGPGQACYSVLLNEQGGIIDDLIIYDLGPSLLD 110
Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNS 113
+T ++ I+ + ++ + + R+++ + + +GV+L+ S S
Sbjct: 111 ESHETLLVVINAACAETDTAWIRQHLERADLQVLDEKKDGVLLALQGPKAIGLLERLSGS 170
Query: 114 SFID-ERF--------------------------------SIADVLLHRTWGHNEKIASD 140
+ RF + L +
Sbjct: 171 DLSELPRFGHCSLNIHGLQAPVFTARTGYTGEDGVELLLKADDGRQLWQLLLEEGVTPCG 230
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ + D +T P +A + L + + +IG++ + + +
Sbjct: 231 LGARDTLRLEAAMHLYGQDMDAATT-PFEAGLGWLVHLEMP-ALFIGRQALEQAAEQG-P 287
Query: 201 RKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
KR + + P++ + +G + L A+A + + +
Sbjct: 288 SKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTEL 347
Query: 256 ALTVHG 261
++ + G
Sbjct: 348 SVEIRG 353
>gi|54400544|ref|NP_001006021.1| aminomethyltransferase, mitochondrial [Danio rerio]
gi|53734452|gb|AAH83400.1| Aminomethyltransferase [Danio rerio]
gi|70780331|gb|AAZ08415.1| glycine cleavage system protein T [Danio rerio]
gi|182890318|gb|AAI64008.1| Amt protein [Danio rerio]
Length = 409
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 86/273 (31%), Gaps = 50/273 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK + F++++I D+ L S +G I+ +++K ++D + +
Sbjct: 95 KVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAG 154
Query: 73 KRDS----LIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
D + +L +K S +V +E + + L D
Sbjct: 155 CADKDSAHMQARLQEFK--SAGHDVDLEFMEESLIALQGPSMARVLQKGVGDDLKKLTFM 212
Query: 118 -----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELR 148
F I + R +E + + LR
Sbjct: 213 TSVLTPVFGIQGCRVTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSLR 272
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D T P +A + G + + G +++ RKR +I
Sbjct: 273 LEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKAKTPRKRVGLI 331
Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239
+ T +PIL +D IG + L
Sbjct: 332 S-TGPPVRQHTPILSSDGRVIGEVTSGCPSPCL 363
>gi|283782420|ref|YP_003373175.1| glycine cleavage system T protein [Pirellula staleyi DSM 6068]
gi|283440873|gb|ADB19315.1| glycine cleavage system T protein [Pirellula staleyi DSM 6068]
Length = 373
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/318 (14%), Positives = 105/318 (33%), Gaps = 65/318 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64
S+ ++V G A+ +L +++T V + R + G IL L+ +++
Sbjct: 53 SHMGRLRVEGPGALAYLDSLVTRKVAGMGPGKIRYGLVCNEAGGILDDILVYHLQQHGGG 112
Query: 65 --FILEIDRSKRDSLIDKLLFYKLRS--NVIIE-------------------IQPINGVV 101
++ ++ S RD ++ + L + +V ++ ++P+ GV
Sbjct: 113 LYALVVVNASNRDKIVSHFQAH-LPASGDVTLDDRTLETAMIAVQGPKALAVVEPLVGVD 171
Query: 102 LSW-----NQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139
+ E T I R E +
Sbjct: 172 VGGLSYYTGTETTICGKPGIVSRTGYTGEDGCEVILPAEAAKDFCDKCLEHGVSVGAAPA 231
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR--IQHR 197
+ LR+ + + ++ P A +D + G+E + R I +R
Sbjct: 232 GLGARDTLRLEAAMPLYGHEL-SESLDPLQAGLDFAVTLE-------GREFLGRQAILNR 283
Query: 198 NIIRKRPMIITGTDD---LPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHA 250
++RP+ + + + D +G + +KA+A+A ++ A
Sbjct: 284 RADKERPVRVGLELAGRRAAREHYAVYSGDKRVGEVTSGAFAPTVQKAIAMAYVEPQLAA 343
Query: 251 IKKGMALTVHGVRVKASF 268
+ +A+ + G A
Sbjct: 344 VGTELAVDIRGTMETARV 361
>gi|218676579|ref|YP_002395398.1| glycine cleavage system T protein [Vibrio splendidus LGP32]
gi|218324847|emb|CAV26581.1| glycine cleavage system T protein [Vibrio splendidus LGP32]
Length = 388
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G +A L++++ D++ LP R + QG I+ +++ + D
Sbjct: 70 SHMGQLRLHGANAAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVANLG-DHLF 128
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI---- 122
+ ++ + + ID L + L ++V +E+ ++ + + + F +
Sbjct: 129 VVVNAACKTQDIDHLTAH-LPADVEMEVIDDRALLALQGPKASEVLARFQPSVADMLFMD 187
Query: 123 --------------------------------ADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 188 VQKVDIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSLRLE 247
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPM 205
G+ D +T +L+ + + G + G +++ +I +++ RKR
Sbjct: 248 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRTDGERAGGFPGADIILEQIATKDVQRKRVG 307
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + +D +IG + ++A R D + +
Sbjct: 308 LVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNAGKPVSMAYVRTDIAVIGTEVFAEVR 367
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 368 GKKLPMTVEK 377
>gi|254229180|ref|ZP_04922599.1| glycine cleavage system T protein [Vibrio sp. Ex25]
gi|262395530|ref|YP_003287383.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. Ex25]
gi|151938265|gb|EDN57104.1| glycine cleavage system T protein [Vibrio sp. Ex25]
gi|262339124|gb|ACY52918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. Ex25]
Length = 372
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 103/310 (33%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + +G I+ +++ + D
Sbjct: 54 SHMGQLRLLGDGAAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------- 118
+ ++ + ++ I L + L S V ++I ++ + + F E
Sbjct: 113 VVVNAACKEQDIAHLQAH-LPSGVELDIIEDRALLAIQGPKAAAVLARFAPEVSDMLFMD 171
Query: 119 ----------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L + E + LR+
Sbjct: 172 IRKVDILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D +T +L+ + + +G + G +++ + I+ +++ RKR
Sbjct: 232 CGLCLYGHDLDTTTTPVEASLLWGIQKVRRIGGEREGGFPGADIILKQIETKDVARKRVG 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALT 258
++ T G+ + D ++IG + ++ R D + +
Sbjct: 292 LVGQTKAPVREGAELFDADGVKIGVVTSGTAGPNAGKPVSMGYVRADLAAIGTELFAEVR 351
Query: 259 VHGVRVKASF 268
+ +
Sbjct: 352 GKMLPMTVEK 361
>gi|297626753|ref|YP_003688516.1| glycine cleavage system T protein, aminomethyltransferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922518|emb|CBL57091.1| Glycine cleavage system T protein, aminomethyltransferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 385
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A +L ++ AD+ + A+ + TP+G ++ + + +D
Sbjct: 70 SHLGKIRVTGPGAKDYLNGVLAADLNKIVPGKAQYQLLCTPEGGVVDDMIAYLLGDDDVF 129
Query: 67 L 67
L
Sbjct: 130 L 130
>gi|50555027|ref|XP_504922.1| YALI0F02849p [Yarrowia lipolytica]
gi|49650792|emb|CAG77727.1| YALI0F02849p [Yarrowia lipolytica]
Length = 406
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 95/276 (34%), Gaps = 56/276 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G +A FL+ I AD+ L + S +LTP+G I+ +ISK E+ F + +
Sbjct: 93 RFSGPAATEFLEKITPADLQALQPFTSTLSVLLTPEGGIVDDLIISKHGENDFYVVTNAG 152
Query: 73 KRDSLIDKLLF------YKLRSNVIIEIQPINGVVLSWNQEHT---------------FS 111
RD + L KL + G++ E F
Sbjct: 153 CRDKDLAFLAKESEPFGDKL-----VHDTIGGGLIALQGPEAAAALQKFTNYDLSQIKFG 207
Query: 112 NSSFID-----------------------ERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
S+++D + + ++ IA + LR
Sbjct: 208 QSAWVDFGGNKYHVARGGYTGEDGFEVSIPDDAASVAFAEALLENDNVIAVGLAARDSLR 267
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG----QEVVSRIQHRNIIRKRP 204
+ G+ + + P +A + + G + G G +++++I+ ++ + R
Sbjct: 268 LEAGMCLYGHEL-SEELTPVEAGLTWVVGKARRSGDRTGFNGSDKILAQIKDKSATKAR- 325
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKAL 239
+ + P G IL + ++G + +L
Sbjct: 326 VGLFNDGPAPREGVAILNEAGEKVGVVTSGCKSPSL 361
>gi|289580397|ref|YP_003478863.1| glycine cleavage system protein T [Natrialba magadii ATCC 43099]
gi|289529950|gb|ADD04301.1| glycine cleavage system T protein [Natrialba magadii ATCC 43099]
Length = 365
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/310 (11%), Positives = 93/310 (30%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ I V G A +Q + + DV L ++ + I G I+ ++ ++ ++
Sbjct: 51 SHMGQIHVTGPDATTLMQRLTSNDVTRLDVGDSQYATITDEDGLIIDDTVVYRLPDENGE 110
Query: 64 -TFILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTF------SNSS 114
T++ + ++ ++ + Y+ ++ Q + + + ++ S
Sbjct: 111 ATYLFVPNAGTDEATHERWISYRNEFDLEATVDNQTDEYAMFAVQGPNAPDLVDEVTDES 170
Query: 115 FID-ERFSIADVLL---------------------------HRTWGHNEKIASDIKTYHE 146
D +RF+ + W + +
Sbjct: 171 LTDVDRFTATMATVDGVECWTARTGYTGEDGFELIVPASEAEDIWAQFDCQPCGLGARDT 230
Query: 147 LRINHGIVDPNTDFLPSTI--FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G++ DF + P++ + + ++G++ + + +
Sbjct: 231 LRIEAGLLLAGQDFDLESNPRTPYETGIGFTVALDTE---FVGRDALEAAREDGFDEELV 287
Query: 205 MIITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+P G I D IGT+ L + D + +
Sbjct: 288 GFQLIDRGIPRHGYDITNMDGRVIGTVTSGTMSPTLDQPIGLGYVPSEYADPGTTLQVVV 347
Query: 258 TVHGVRVKAS 267
+ +
Sbjct: 348 RGQSKKARVE 357
>gi|212633781|ref|YP_002310306.1| glycine cleavage system aminomethyltransferase T [Shewanella
piezotolerans WP3]
gi|226711375|sp|B8CK16|GCST_SHEPW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|212555265|gb|ACJ27719.1| Glycine cleavage system T protein [Shewanella piezotolerans WP3]
Length = 364
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 56/163 (34%), Gaps = 3/163 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L G ++ + + + +
Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTQY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F D + + +
Sbjct: 110 RIVVNSATREKDLAWINEQVKGFSVEVTERPELAMIAVQGPNAKAKAATVFNDTQNAAVE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166
+ + + Y E + + + L
Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEVIVPEAEAEALWQAFL 212
>gi|70733247|ref|YP_263020.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
fluorescens Pf-5]
gi|68347546|gb|AAY95152.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf-5]
Length = 360
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 103/304 (33%), Gaps = 44/304 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +LQ ++ DV L A S +L +G I+ ++ ++ ED +
Sbjct: 50 SHMTVIDVSGTQAKAWLQRLLANDVERLHNPGQALYSTMLNERGGIVDDMIVYRL-EDAY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSNSSFID 117
L ++ + RD + + V + +P ++ + T S + I
Sbjct: 109 RLALNAATRDQDLAWMQAQLGDFQVQLHERPELAMLAIQGPQARHKIAELVTQSRGTLIQ 168
Query: 118 ERFSI-----ADVLLHRTWGHNEK-----IASD------------------IKTYHELRI 149
+ D + RT E + +D + LR+
Sbjct: 169 QLKPFEAGFDGDWFIARTGYTGEDGLEIVLPADQAPAFFNDLVGAGISPIGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D + P A M +IG+ + + + +K ++
Sbjct: 229 EAGMNLYGQDI-HQDVSPLAANMAWSIAWEPASRQFIGRSALEAERAAGVKQKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + D+ G + K++A+AR+ + A + + + V+
Sbjct: 288 ERGVLRAHQVVRIADVGEGEITSGSFSPTLSKSIALARV-PMATADRAEVEIRGKWYPVR 346
Query: 266 ASFP 269
P
Sbjct: 347 VVKP 350
>gi|290957225|ref|YP_003488407.1| glycine cleavage T protein aminomethyltransferase [Streptomyces
scabiei 87.22]
gi|260646751|emb|CBG69848.1| putative glycine cleavage T protein aminomethyltransferase
[Streptomyces scabiei 87.22]
Length = 350
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 101/297 (34%), Gaps = 59/297 (19%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ D+ + AR + I G IL ++ ++ +
Sbjct: 32 LSHMGEITVSGPGAAALLDHALV-GDIGGVKPGRARYTMICREDGGILDDLIVYRLGDTE 90
Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + S D+L+++ + + V + + ++ E +S D
Sbjct: 91 YLVVANASNAQVVLDALVERAAGFD--AEVR-DDRDAYALLAVQGPESPGILASLTDADL 147
Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
+ L+ RT E K ++ +
Sbjct: 148 DGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLVPCG 207
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVV--SRIQHR 197
LR+ G+ + + P DA + + + K G ++G+ + +
Sbjct: 208 LSCRDTLRLEAGMPLYGHELSTE-LTPFDAGLGRV--VKFGKEGDFVGRAALREASEHVN 264
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
+ +I +P +G P++ + IG + L A+A +D + A
Sbjct: 265 HEPPVLVGLIAEGRRVPRAGYPVVAEGKVIGEVTSGAPSPTLGKPIAMAYVDAMYAA 321
>gi|163796958|ref|ZP_02190914.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha
proteobacterium BAL199]
gi|159177705|gb|EDP62256.1| FAD dependent oxidoreductase/aminomethyl transferase [alpha
proteobacterium BAL199]
Length = 823
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 95/315 (30%), Gaps = 63/315 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ + +V G A LQ + ADV +P + L P+G I ++++ E F
Sbjct: 491 MSSFAKFRVEGPDAEAVLQLVSAADVA-VPVGRCAYTQWLNPRGGIEADLTVTRLSEAAF 549
Query: 66 ILEIDRSKRDSLIDKLLFYK---LR--------SNVIIEI-QPINGVVLSWNQEHTFSNS 113
++ + + L + R + +I + P VL + SN
Sbjct: 550 LVVTSGGAQTRDLAWLRRHVPDGARCVVTDASAAEAVISVMGPKAREVLQPLTPQSLSNE 609
Query: 114 SFI---------------DERFSIADVLLHRTWGHNEKI-----------------ASDI 141
+F R S L + + +
Sbjct: 610 AFPFGTAQTIEIGMGLARAHRLSYVGELGWEIYVATDMARHVFDAILESGERHGLRLCGM 669
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQH 196
RI G D +A + + + K G +IG++ V R +
Sbjct: 670 HALDSCRIEKGYRHFGHDISGEDHV-LEAGLGF--AVKVDKPRSAFGDFIGRDAVLRRRE 726
Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI---DK 246
+ + + +T L PIL D +G + G L +
Sbjct: 727 QGLTHRLLQFRLTDPQPLLYHNEPILQDSKAVGRITSGNYGHWLGGAVGLGYVPCRPGES 786
Query: 247 VDHAIKKGMALTVHG 261
+ + + A+ V G
Sbjct: 787 AEEVLARSYAINVAG 801
>gi|85703653|ref|ZP_01034757.1| aminomethyltransferase [Roseovarius sp. 217]
gi|85672581|gb|EAQ27438.1| aminomethyltransferase [Roseovarius sp. 217]
Length = 390
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 86/282 (30%), Gaps = 58/282 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L ++T DV + + +G ++ + + + + L
Sbjct: 67 RITGPDAARVLNRLVTRDVAKIATGRVGYALWCDEEGMVIDDGTLFHLGPEDWRLCCQEP 126
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------------- 117
L++ + ++++ E + I G+ L + ++ +D
Sbjct: 127 MLTWLLEAAWGFN--ADILDESREIAGLALQGPTAYAVLCAAGLDVAHLRPFDLEEVEPG 184
Query: 118 ---ERFSIADVL---LHRTWGHNEKIASDIKT-----------YHE---LRINHGIVDPN 157
R L L WG + + Y RI G +
Sbjct: 185 LMISRTGFTGDLGYELWTAWGDALPLWDRLWQAGDNLGLRAIGYEAVNIARIEAGYMVAG 244
Query: 158 TDFLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
DF P+ P + + + + LTKG + G+ R R M +
Sbjct: 245 VDFQPAHATERLHRGHTPLELGLGPM--VDLTKGHFNGR----RALLATKPRSLLMRLDV 298
Query: 210 TDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARI 244
P G+ + E+G + V ALA +I
Sbjct: 299 EGFKPAQGALVYQAKRREVGHVTSGVWSPTAKRNIALAHVQI 340
>gi|239834154|ref|ZP_04682482.1| glycine cleavage system T protein [Ochrobactrum intermedium LMG
3301]
gi|239822217|gb|EEQ93786.1| glycine cleavage system T protein [Ochrobactrum intermedium LMG
3301]
Length = 367
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 47/266 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ I+V G A L T D L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLIEVSGADAAALL--AETCPLDPTVLKEGQSKYTFFLNENGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLNEAASGKNVTVNPLDRVFLALQGPEAESVINDAGLKGAELAFM 173
Query: 105 ----------------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
E F DE A L R + LR
Sbjct: 174 SGFEPKQGWFMTRSGYTGEDGFEIGLPADE----ARALATRLLADERVEWIGLAARDSLR 229
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D P T P A + + K + G + V + KR +
Sbjct: 230 LEAGLCLHGQDITPETD-PVSAGLTWAITKPVREKAAFNGAKAVLDAIAKGAAAKRVGLK 288
Query: 208 TGTDDLPPSGSPILTD-DIEIGTLGV 232
+G+ + + +IGT+
Sbjct: 289 PEGRQPVRAGADLFDESGRQIGTVTS 314
>gi|330809034|ref|YP_004353496.1| aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377142|gb|AEA68492.1| putative aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 780
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 57/309 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A LQ +T DV L SA+ G +L + ++ D F
Sbjct: 457 EIIGPDAEALLQYCLTRDVRRLAVGQVVYSAMCHEHGGMLDDGTLLRLGPDNFRWICGED 516
Query: 73 KRDS----LIDKLLFYKLRSN---VIIEIQPING----------VVLSWNQEH------- 108
+ KL K+ I + G V Q
Sbjct: 517 YAGAWLREQAQKLGM-KVWVKSASEQIHNLAVQGPMSRELLKQMVWTPATQPSLENLGWF 575
Query: 109 --------TFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
+ + R L + W E + ++
Sbjct: 576 RFLVGRLDCYDGCPLMISRTGYTGELGYEVWCQPEDAERVWDRIWQQGQPLGLVPLGLEA 635
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G++ +F T P +A + + +IG++ + R +
Sbjct: 636 LDMLRIEAGLIFAGYEFSDQTD-PFEAGIGFSVPMKSKTDDFIGRDALLRRSAHPTHKLV 694
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL-T 258
+ ++G ++ G P+ ++G + L A+ R+D + + +
Sbjct: 695 GLQLSG-NEAAHHGDPVYRGRAQVGVITSACRSPLLASNIALCRVDVACADVGTMLEIGK 753
Query: 259 VHGVRVKAS 267
V G++ + S
Sbjct: 754 VDGLQKRIS 762
>gi|319786131|ref|YP_004145606.1| glycine cleavage system protein T [Pseudoxanthomonas suwonensis
11-1]
gi|317464643|gb|ADV26375.1| glycine cleavage system T protein [Pseudoxanthomonas suwonensis
11-1]
Length = 377
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 52/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ V L A S +L QG ++ + + +D F
Sbjct: 59 SHMTVVDLHGVQVRQFLRRLLANSVDKLKTRGKALYSCMLDGQGGVIDDLIAYYLGDDYF 118
Query: 66 ILEIDRSKRDSLIDKLLFYK------LRSNVIIEI---------QPINGVVLSWNQEHTF 110
L ++ + R+ + + +R + I + G++ ++E
Sbjct: 119 RLVVNAATREKDLAWIRQQAQAFGVEVRERAELAIIAVQGPQARDKVVGLLAEADRERAA 178
Query: 111 SNSSFIDERFSIADVLL--------------------------HRTWGHNEKIASDIKTY 144
+ F + A + + +
Sbjct: 179 GLARFAAIDVASAGGIPLFLARTGYTGEDGFEVVLPQDQAVAFWNALLEAGVKPAGLGAR 238
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR+ G+ D + P ++ + +SL +G +IG+ + + + R+
Sbjct: 239 DTLRLEAGMNLYGQDM-DESTTPWESGLGWT--VSLDEGRDFIGRAALEAQKAAGVPRQL 295
Query: 204 PMIITGTDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTV 259
++ + G +L E GT +G KA+A+ARI + + +
Sbjct: 296 VGLVMDERGVLRHGQKVLAAGGEGEILSGTFSPTLG-KAIALARI-PAGEPGQVRVDIRG 353
Query: 260 HGVRVKASF 268
V V+
Sbjct: 354 REVPVRVVK 362
>gi|292487128|ref|YP_003529998.1| aminomethyltransferase [Erwinia amylovora CFBP1430]
gi|292900489|ref|YP_003539858.1| aminomethyltransferase (glycine cleavage system protein) [Erwinia
amylovora ATCC 49946]
gi|291200337|emb|CBJ47465.1| aminomethyltransferase (glycine cleavage system protein) [Erwinia
amylovora ATCC 49946]
gi|291552545|emb|CBA19590.1| aminomethyltransferase [Erwinia amylovora CFBP1430]
gi|312171233|emb|CBX79492.1| aminomethyltransferase [Erwinia amylovora ATCC BAA-2158]
Length = 365
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L ++ ++ I E+ F
Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTRPGKALYTAMLNASAGVIDDLIVYFISEEFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSIA 123
L ++ + R+ + + + V + + ++ S D +R +++
Sbjct: 110 RLVVNSATREKDLAWIAQHAAAYGVELTERDDLSLIAVQGPNAQQKAQSVFDDAQRDAVS 169
Query: 124 D----------------------------------VLLHRTWGHNEKIASDIKTYHELRI 149
L + + + LR+
Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEPGYEIALPNQQAAELWQRLLAAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + T+ P A M G + +IG+E++ + + R
Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRPFIGREMLELQRAKGTERLVGLVMTE 288
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
K + + +L I G+ +G ++A+AR+ + + +
Sbjct: 289 KGVLRNALPVHFSDADGNMLEGVITSGSFSPTLG-YSIALARV-PAGIGEQAVVQIRNRA 346
Query: 262 VRVKASFP 269
+ V + P
Sbjct: 347 MPVTVTKP 354
>gi|269104350|ref|ZP_06157046.1| aminomethyltransferase (glycine cleavage system T protein)
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268160990|gb|EEZ39487.1| aminomethyltransferase (glycine cleavage system T protein)
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 372
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 107/312 (34%), Gaps = 54/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G+ A L+ ++ D++ LP R + QG I +++ D
Sbjct: 54 SHMGQIRLIGEEAAKELEKLVPVDIIDLPVGKQRYALFTNEQGGIEDDLMVTNFG-DCLY 112
Query: 67 LEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + + I++L + L ++ +Q + S+ F+D
Sbjct: 113 LVVNAACKHQDIERLKQHLAPSVTLEVLEDRALLALQGPKAAAVLAQLNPAVSDMVFMDA 172
Query: 119 -------------RFSIADVLLHRTWGHNEKIAS--------DIKTY------HELRINH 151
R N K+ + + LR+
Sbjct: 173 CRLDLLGVECFVSRSGYTGEDGFEISVPNNKVEEIACHLVEFEEVEWIGLGARDSLRLEC 232
Query: 152 GIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRKR 203
G+ D ST P +A + L G G + G +V+ +I+ + I++KR
Sbjct: 233 GLCLYGHDLTSSTT-PVEASLLWAISPIRRLGGE--RAGGFPGADVILEQIKTKQIVQKR 289
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMA 256
+I T G+ +L +D IGT+ ++ A I D ++
Sbjct: 290 IGLIGLTKAPVREGAELLDENDQVIGTVTSGTYGPSIAQPVLMAFVDIAHTDIGMEMWAL 349
Query: 257 LTVHGVRVKASF 268
+ + V+ +
Sbjct: 350 VRGKKIPVQVTK 361
>gi|302540707|ref|ZP_07293049.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302458325|gb|EFL21418.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces
himastatinicus ATCC 53653]
Length = 818
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 58/270 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ FLQ + T + + +L G + ++++ E+ F + +
Sbjct: 507 LEVTGPGALDFLQRMTTNQLAK-KPGAVTYTLLLDEAGGVRSDLTVARLGENRFQVGANS 565
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSF----- 115
+D LL + +V I +I P + W FS+ +F
Sbjct: 566 GI---DLDWLLRHA-PDDVHIADITPGTCCIGVWGPLARELVQPLTPDDFSHQAFGYFKA 621
Query: 116 ----------IDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELR 148
R S L + + IA+ ++ LR
Sbjct: 622 RRTYIGHVPVTAMRLSYVGELGWELYTTADLGLRLWDTLWEAGQRHAVIAAGRSAFNSLR 681
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN--IIRKRPMI 206
+ G D P++A + + + KG ++G+ + ++ R R+R
Sbjct: 682 LEKGYRAWGHDMTTEHD-PYEAGVGF--AVRMNKGDFLGR---AALEGRGEETARRRLAC 735
Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVV 234
+T D P+ D + G +
Sbjct: 736 LTLDDPAAIVLGKEPVYVDGVAAGYVTSAS 765
>gi|260431237|ref|ZP_05785208.1| dimethylglycine dehydrogenase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415065|gb|EEX08324.1| dimethylglycine dehydrogenase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 817
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 17/149 (11%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPY--KIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
++V G A L ++ LP + +L +G+I L + K+ ED + L
Sbjct: 498 VEVSGPDARALLDRLVAN---RLPQKVGGIALTHMLNRRGRIELETTVVKLAEDRYYLVC 554
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDE 118
L+D L ++ NV I ++ N LS N + N+ F
Sbjct: 555 AAFFEQRLLDHLTQHRDEENVDIILRSDNWAALSLNGPRAREVLAACTDADLRNAGFKWL 614
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHEL 147
DV HR W A ++ +
Sbjct: 615 TAQEIDVAGHRLWAFRMSYAGELG-WELH 642
>gi|56696476|ref|YP_166833.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
gi|56678213|gb|AAV94879.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
Length = 818
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A L + + P IA + +L +G+I L + K++ED F L
Sbjct: 498 VEVSGPDAGALLDRLTANRLPQKPGGIA-LTHMLNRRGRIELETTVVKLDEDRFYLVCAA 556
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHR-T 130
L+D L ++ +++ + + L+ N H + + AD+ R
Sbjct: 557 FFEQRLLDHLAAHRGTADITVRNLSTDWAALALNGPHARDILAA----CTEADLSNARFK 612
Query: 131 WGHNEKIASDIKTYHELRINHG 152
W ++I + LR+++
Sbjct: 613 WLTAQQITVAGHSLWALRMSYA 634
>gi|167625286|ref|YP_001675580.1| glycine cleavage system aminomethyltransferase T [Shewanella
halifaxensis HAW-EB4]
gi|189039320|sp|B0TSG7|GCST_SHEHH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|167355308|gb|ABZ77921.1| glycine cleavage system T protein [Shewanella halifaxensis HAW-EB4]
Length = 364
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L G ++ + + + +
Sbjct: 50 SHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEY 109
Query: 66 ILEIDRSKRD 75
+ ++ + R+
Sbjct: 110 RIVVNSATRE 119
>gi|328675645|gb|AEB28320.1| Aminomethyltransferase (glycine cleavage system T protein)
[Francisella cf. novicida 3523]
Length = 358
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A FL+ ++ DV L A+ +L I+ + K++ + F
Sbjct: 49 SHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVDAEHFR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
+ ++ R+S + + +V I Q +V +
Sbjct: 109 VVVNAGNRESDVAWFNQNIQKFDVTITPQTDLAIVAVQGPKA 150
>gi|71282177|ref|YP_268017.1| glycine cleavage system aminomethyltransferase T [Colwellia
psychrerythraea 34H]
gi|123633392|sp|Q486J8|GCST_COLP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|71147917|gb|AAZ28390.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H]
Length = 362
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 101/306 (33%), Gaps = 44/306 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A + +L +G ++ +I + +
Sbjct: 50 SHMTIVDVQGADAKAFLRRLVINDVAKLATPGKALYTGMLNEEGGVIDDLIIYFFSDTDY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------------- 108
L ++ + R + + ++ I +P G++ E
Sbjct: 110 RLVVNSATRVKDLAWMTKQSTGFDITITERPEFGMLAVQGPEAKAKVAKLLTAEQIEAVE 169
Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
F D + + S + LR+
Sbjct: 170 GMKPFFGVQVGDLFIATTGYTGEDGYEIIVPNNSAEDFWQKLLDEGVVPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P A M T +IG++V++ + K ++
Sbjct: 230 EAGMNLYGLDM-DETVSPLAANMAWTISWEPTDRDFIGRDVLTAQKAAGDQPKLVGLVLE 288
Query: 210 TDDLPPSGSPILT----DDIEIGTLGVVVGKKALAIARIDK-VDHAIKKGMALTVHGVRV 264
+ S ++T +I GT +G ++A+AR+ + V + + ++V
Sbjct: 289 AKGVLRSHQVVVTEFGNGEITSGTFSPTLG-HSVALARVPRSVKVGDTIEVEMRKKLIKV 347
Query: 265 KASFPH 270
+ + P
Sbjct: 348 QVTKPS 353
>gi|322834191|ref|YP_004214218.1| glycine cleavage system T protein [Rahnella sp. Y9602]
gi|321169392|gb|ADW75091.1| glycine cleavage system T protein [Rahnella sp. Y9602]
Length = 365
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E+ F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTVPGKALYTGMLNASGGVIDDLIVYFLNENYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + V + ++ +V +
Sbjct: 110 RLVVNSATREKDLAWISQHAEPYAVELTVRDDLALVAVQGPQA 152
>gi|156100279|ref|XP_001615867.1| aminomethyl transferase domain containing protein [Plasmodium vivax
SaI-1]
gi|148804741|gb|EDL46140.1| aminomethyl transferase domain containing protein [Plasmodium
vivax]
Length = 535
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 43/181 (23%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT--------------------LPYKIAR-- 40
L N++ +++CG + FLQ++ T D+ L A
Sbjct: 6 LCRLKNRTLVQICGTDSFRFLQSLTTNDLNKIITEKDFSLYKNVPKNVLSCLDDTSAYQL 65
Query: 41 --------------GSAILTPQGKILLYFLI----SKIEEDT---FILEIDRSKRDSLID 79
S L GKIL + EE++ F ++ + L+
Sbjct: 66 CGHNVKYKKWTKGLPSLFLQNNGKILADCFLYSVKYTHEENSFSLFYMDCNVKASRMLLS 125
Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139
L KL +V V + + E S + +++
Sbjct: 126 ILEKRKLSCDVHFSEMANIAVYQLLSGASVLRGGTSTAEVVSSGGDSATQLEDELPALSN 185
Query: 140 D 140
+
Sbjct: 186 N 186
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
F + P D D LN ++ KGCY+GQE ++R ++ I K
Sbjct: 327 FKFKDLSPFDLNYDKLNYLAKDKGCYVGQEAINRTRNEIFINK 369
>gi|296242147|ref|YP_003649634.1| aminomethyltransferase [Thermosphaera aggregans DSM 11486]
gi|296094731|gb|ADG90682.1| aminomethyltransferase [Thermosphaera aggregans DSM 11486]
Length = 374
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 105/313 (33%), Gaps = 51/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEEDTF 65
S+ I + G +P Q + T DV + + L ++ ++ KI ++ +
Sbjct: 54 SHMGRIVLRGPDVLPLAQYLYTKDVSKTKPSWMSGPTLALNQWARVKDDEMLYKISDEEW 113
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------------------NGVVLSWN-- 105
L + R+ +++ + +EI I + W
Sbjct: 114 YLVTNALAREKMVNYIKSVIAEKKFKVEITDITLDTSMLAVQGPRAAELMEKIGAKWATD 173
Query: 106 --------QEHTFSNSSFIDERFSIADVLLHRTWG-------------HNEKIASDIKTY 144
E+ + + R WG N + +
Sbjct: 174 LKTLEFRMGENIGEVKTLLVSRSGWTGEDGFEIWGGHHEIKSIVEKLIANGAKPAGLIAR 233
Query: 145 HELRINHGIVDPNTDFLPSTI-FPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LRI G V + ++ + FP + L I+ K ++G+E + + +
Sbjct: 234 DTLRIEMGFVLGDHEYGEDPLKFPCALSLRYGLGAITWEKKGFVGEEALRTCKREGVRWV 293
Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGM 255
R + G + +P +G P+ ++D+++G + + +A+A+A +D + +
Sbjct: 294 RVGLKFGKEAGRLVPRTGMPVYSEDVQVGWITSGTFSPILNRAIAMAYVDSRYAVFGEEL 353
Query: 256 ALTVHGVRVKASF 268
+ V + A
Sbjct: 354 EVLVRDKKYSAKI 366
>gi|192361648|ref|YP_001980945.1| glycine cleavage system aminomethyltransferase T [Cellvibrio
japonicus Ueda107]
gi|238692442|sp|B3PI82|GCST_CELJU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|190687813|gb|ACE85491.1| glycine cleavage system T protein [Cellvibrio japonicus Ueda107]
Length = 371
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY--KIARGSAILTPQGKILLYFLISKIEE 62
S+ + + V G A +LQ ++ DV L A S +L QG ++ ++ + +
Sbjct: 50 SHMTVVDVTGSDAKAYLQYLLANDVAKLDNLVGKALYSGMLNEQGGVIDDLIVYNMGD 107
>gi|261749518|ref|YP_003257204.1| aminomethyltransferase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497611|gb|ACX84061.1| aminomethyltransferase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 367
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/314 (19%), Positives = 105/314 (33%), Gaps = 58/314 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK++ FLQ T D+ + A+ S + G I+ +I KI E+ F+
Sbjct: 53 SHMGKFILKGKNSHNFLQYFTTNDLSNIKTGQAQYSCFINHLGGIIDDLVIYKISEEKFL 112
Query: 67 LEI------------------------DRSKRDSLI-----------DKLLFYKLRSNV- 90
L + D S+ SL+ KL L S +
Sbjct: 113 LIVNAANIEKNKKWINDHLNHKNLTFIDSSQEYSLLAIQGPKSLYSIQKLTNISL-SKIP 171
Query: 91 ----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143
I VL +T S I R A+ + + E I +
Sbjct: 172 FYCFEIGKFAEIDNVLISRTGYTGSKGVEIYIRNEYAENIWNEILKIGESFQIKPCGIAS 231
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D I P +A + + K +IG+E++ + + II+
Sbjct: 232 RDSLRLEMGYRLYGQDL-SEKITPIEAGLSWI--TKFNKK-FIGREILWNQKKKGIIKVY 287
Query: 204 PMIITGTDDLPPSGSPILTDDI--EIGTLGVVVG----KKALAIARIDKVDHAIKKGM-- 255
+P SG D+ +G + V KK + + I K + + K
Sbjct: 288 IFSCRKKGKIPRSGYS-FKDEKNFTVGRVTSGVYSPVLKKGIGLGYITKNNFNLDKNSIF 346
Query: 256 -ALTVHGVRVKASF 268
++ + ++
Sbjct: 347 VSIRNKNIPIQIVK 360
>gi|260469633|ref|ZP_05813797.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
gi|259028600|gb|EEW29912.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
Length = 371
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 50/305 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + G A + +I D + R S + G IL + ++ + F
Sbjct: 51 LSTMGKMDIKGPDAEALVNHVIVNDAAAMKPGQVRYSTVCREDGGILDDLTVFRLGTEHF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI---------------QPINGVVLSWNQEHTF 110
+L R ++ LL + + + + ++
Sbjct: 111 MLVTGSVNRLKMLPWLLHHAEGRKAYVTDITAAVPFPTIQGPRSRDLLKALVRDADLDGL 170
Query: 111 SNSSFIDERFSIADVLLHRT-----WGHNEKIASDIKT--YHELR--------------- 148
+F R VL+ RT G + +D + L
Sbjct: 171 KRWAFTSGRVGETKVLISRTGVTGELGFELFVPADEAASVWERLMQAGRDFGLKPYGVLA 230
Query: 149 -----INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ D + P +D I KG +IG+E + +++ + + +
Sbjct: 231 MFTLGLEKAYPAHGIDM-DESRTPFHVGLDRW--IKFDKGDFIGREALLKVRDKGLDERW 287
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVR 263
++ D + + ++ D + G + +L KV + T G
Sbjct: 288 TGLVLDGDKPATTDARVMADGEDAGIVTYSDHGYSLG-----KVLATAHLRLPFTAIGTE 342
Query: 264 VKASF 268
+
Sbjct: 343 LSIEI 347
>gi|184201792|ref|YP_001855999.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201]
gi|183582022|dbj|BAG30493.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201]
Length = 970
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/335 (14%), Positives = 105/335 (31%), Gaps = 72/335 (21%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I++ G A FL + T L + R + TP G + + ++
Sbjct: 630 MDATTL---GKIEIRGTDAGEFLNRVYTNAFKKLKPGMGRYGVMCTPDGMVFDDGVTLRL 686
Query: 61 EEDTFILEIDRSKRDSLIDKL---------LFYKLRSNVI-------------------- 91
+ED +++ ++++ L ++V
Sbjct: 687 DEDRYLMTTTTGNAAAVLEWLEEWSQTEWPELDVTFTSVTEQWTTVAVAGPRSRDVIAKL 746
Query: 92 ---IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-------LHRTWGHNEKIASDI 141
+++ +++ + S R S + L E + +
Sbjct: 747 APQLDVSQDAFPFMAFRETVLASGVPARICRISFSGELAYEVNVSGWYGLSVWEDVFAAG 806
Query: 142 KTY----------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+ + H LR D T+ P D M+ + +S TK +IG+
Sbjct: 807 EEFGITPYGTETMHVLRAEKAFPIVGQD-TDGTVTPQDLGMEWV--VSKTKD-FIGKRSY 862
Query: 192 SRIQHRNIIRKRPMIITGTD---------DLPPSGSPILTDDIE---IGTLGVVVGKKAL 239
R + RK+ + + TD L +G+P+ + +G + AL
Sbjct: 863 DRPSATDPQRKQLVAVLPTDRVTRLPEGAQLIAAGTPVTPEQGPVPMVGHVTSAYRSAAL 922
Query: 240 ----AIARIDKVDHAIKKGMALTVHGVRVKASFPH 270
+A ++ I + + + G V +
Sbjct: 923 DRTFGLALVENGRQRIGETLQAPLDGTLVDVTIAE 957
>gi|332142281|ref|YP_004428019.1| glycine cleavage system aminomethyltransferase T [Alteromonas
macleodii str. 'Deep ecotype']
gi|238693238|sp|B4RSJ5|GCST_ALTMD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|327552303|gb|AEA99021.1| glycine cleavage system aminomethyltransferase T [Alteromonas
macleodii str. 'Deep ecotype']
Length = 359
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E +
Sbjct: 50 SHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQ 106
L ++ + R+ ++ L+ S V I +P ++
Sbjct: 110 RLVVNSATREKDMNWLM-----SKAEGFDVTITERPEFAMIAVQGP 150
>gi|239996850|ref|ZP_04717374.1| glycine cleavage system aminomethyltransferase T [Alteromonas
macleodii ATCC 27126]
Length = 359
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E +
Sbjct: 50 SHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQ 106
L ++ + R+ ++ L+ S V I +P ++
Sbjct: 110 RLVVNSATREKDMNWLM-----SKAEGFDVTITERPEFAMIAVQGP 150
>gi|114769342|ref|ZP_01446968.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
gi|114550259|gb|EAU53140.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
Length = 386
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 62/294 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+++ G A F+Q + D+ L + I +G IL ++ ++EE+ F +
Sbjct: 70 VEINGPDAAEFVQLLTPRDLSKLAVGQCKYIIITNAEGGILNDPVLLRLEENKFWISLAD 129
Query: 69 ---------------IDRSKRDSLIDKLL---------FYKLRSNVIIEIQPINGVVLSW 104
+D S + + L KL N I + W
Sbjct: 130 SDILFWAQGLAINSGLDVSIHEPDVSPLQLQGPKSGKIMQKLFGN------GIKELKYYW 183
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELR 148
+ + + R + L + + + +++ R
Sbjct: 184 LEHLNLNGIDLVVSRTGWSSELGYEIYLQDSSRGTELWDTIMSAGKEFNLSPGHTSSIRR 243
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
I G++ + D P + +D L I L G +IG + +S+I+ + RK+ II
Sbjct: 244 IEGGMLSYHADM-DILTNPFELGLDRL--IDLDSGQKFIGHDALSKIKANGVSRKQVGII 300
Query: 208 TGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
+ L + I ++ IG + + ALA+ I+ + +
Sbjct: 301 IDCEPLAGPNTTFWKITKNNKVIGKVTSAIYSPRLEKNIALAMMSIEYSEIDTR 354
>gi|13476081|ref|NP_107651.1| aminomethyltransferase [Mesorhizobium loti MAFF303099]
gi|14026841|dbj|BAB53437.1| mll7302 [Mesorhizobium loti MAFF303099]
Length = 381
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 58/306 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G + LQ +T DV L SA+ G ++ + ++ +D F
Sbjct: 51 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 110
Query: 66 IL----EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94
++ KL LR S + I
Sbjct: 111 RWVGGDDLSGEWLRETAKKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVVWTSPLQPSI 170
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142
+ + + + + R L + W EK+ I
Sbjct: 171 DELEWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 230
Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+RI G++ +F T P +A + + +IG+E + R +
Sbjct: 231 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKSKTDDFIGREALIRRKEH 289
Query: 198 NIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGV-----VVGKKALAIARIDKVDHAI 251
+ + + ++ G + +IG + V+GK +A+AR+D AI
Sbjct: 290 PQTK--LVGLDIDSNVAVGHGDCVHVGRAQIGVVTSGMRSPVLGKN-IALARLDVTHAAI 346
Query: 252 KKGMAL 257
+ +
Sbjct: 347 GTEVEI 352
>gi|154247113|ref|YP_001418071.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
gi|154161198|gb|ABS68414.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
Length = 772
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 98/315 (31%), Gaps = 59/315 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A LQ +T D+ L +A+ G ++ I ++ F
Sbjct: 444 LSPLRKFEVTGPDAELLLQRTVTRDMRKLAVGQVVYTALTYDHGGMIDDATIFRLAPANF 503
Query: 66 ILEI--------------------------DRSKRDSLIDKLLFYKLRSNVI------IE 93
+ D+ ++ L L + VI
Sbjct: 504 RVVCGEEFTGAWLRDKAREWGLNAFVRSSTDQLHNIAVQGPLSREIL-AEVIWTGPTQPA 562
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139
I + + + + + R L + W H + +
Sbjct: 563 IAELKWFRFAVARLGGPMGPALVVSRTGYTGELGYEIWCHPKDAGAVFDAVWAAGVPKGM 622
Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LRI G+V DF T P +A + ++ + ++G+ + R +
Sbjct: 623 KPLGLAALDMLRIEAGLVFAGYDFCDQTD-PFEAGIGF--AVAEKEEDFVGKAALMRRKA 679
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIK 252
+ + I G D + G P+ ++G + L A+ARID A
Sbjct: 680 SPARKMVGLRIEGNDAVGH-GDPLYMGRAQVGVVTSATHSPILKGQIALARIDVAHGATG 738
Query: 253 KGMAL-TVHGVRVKA 266
+ + + G++ +
Sbjct: 739 TQVEIGKLDGLKKRI 753
>gi|326382501|ref|ZP_08204192.1| glycine cleavage system aminomethyltransferase T [Gordonia
neofelifaecis NRRL B-59395]
gi|326198620|gb|EGD55803.1| glycine cleavage system aminomethyltransferase T [Gordonia
neofelifaecis NRRL B-59395]
Length = 369
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 91/317 (28%), Gaps = 58/317 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A +T D+ + A+ + G ++ + + +D
Sbjct: 52 SHLGKALVAGPGAAAFINATLTNDLGKIEPGKAQYTLCCNETGGVIDDLITYLVSDDEVF 111
Query: 67 LEIDRSKRD--------------SLIDKLLFYKLRS-------NVIIEI-QPINGVVLSW 104
L + + ++ D+ Y + + V+ + P +++
Sbjct: 112 LVPNAANTPAVVAALSAVAPEGIAITDQHRDYAVFAVQGPKSTEVLAALGLPTEMAYMAY 171
Query: 105 NQEHTFSNSSFID-----------------ERFSIADVLLHRTWGH---NEKIASDIKTY 144
+D R+ A ++ + +
Sbjct: 172 ADASITVGGRDLDIRVCRTGYTGEHGYEVLPRWDDAGIVFDALLAEVTARGGQPAGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR G + I P A + K + G+E + + R R
Sbjct: 232 DTLRTEMGYALHGHELSVD-ITPVQARSSW--AVGWDKPAFFGREALLAERETGPAR-RL 287
Query: 205 MIITGTDDLPPSGS---PILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257
+ T P + +IG K+ +A+A ID V +KKG +
Sbjct: 288 YGLRATGRGVPRADCTVHLEAGGEQIGVCTSGTFSPTLKQGIALAFID-VSSGVKKGAEV 346
Query: 258 TVH----GVRVKASFPH 270
V + + P
Sbjct: 347 VVDVRGRALTCEVVLPP 363
>gi|153011184|ref|YP_001372398.1| glycine cleavage system aminomethyltransferase T [Ochrobactrum
anthropi ATCC 49188]
gi|151563072|gb|ABS16569.1| glycine cleavage system T protein [Ochrobactrum anthropi ATCC
49188]
Length = 367
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 49/267 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITA--DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ I++ G A L T D + L ++ + L G +L +++++ ED
Sbjct: 56 SHMKLIEISGADAAALL--AETCPLDPIVLKEGQSKYTFFLNDNGGVLDDLIVTRLGEDR 113
Query: 65 FILEIDRSKRDSLIDKLL------------FYKLR-------SNVIIEIQPINGVVLSW- 104
F++ + D+ I+ L ++ + +I + G L++
Sbjct: 114 FMVVANAGNADADIEHLTEAASGKDVKVNPLDRVFLALQGPEAEAVINDAGLAGAELAFM 173
Query: 105 ----------------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
E F DE A L + + LR
Sbjct: 174 SGFEPKAGWFMTRSGYTGEDGFEIGVPADE----ARALAMKLLADERVEWIGLAARDSLR 229
Query: 149 INHGIVDPNTDFLPSTIFPHDALM--DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ G+ D P T P A + + + K + G + V + KR +
Sbjct: 230 LEAGLCLHGQDITPETD-PVSAGLTWAITKAVR-EKAAFNGAKAVLDAIAKGASAKRVGL 287
Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGV 232
G+ + + +IGT+
Sbjct: 288 KPEGRQPVRGGADLFDESGRQIGTVTS 314
>gi|298492955|ref|YP_003723132.1| glycine cleavage system T protein ['Nostoc azollae' 0708]
gi|298234873|gb|ADI66009.1| glycine cleavage system T protein ['Nostoc azollae' 0708]
Length = 378
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 55/231 (23%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
I V G A +LQ+++TAD+ + + I G+ ED F + +D
Sbjct: 158 LIAVQGPKATSYLQSLVTADLTPIKAFAHLETTIF---GRPAFLARTGYTGEDGFEVMVD 214
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
L +L GV+ L R
Sbjct: 215 SEIGIELWQRL--------------YDAGVIPCG---------------------LGCR- 238
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
LR+ + D + P +A + L + TKG +IG+ V
Sbjct: 239 --------------DTLRLEAAMALYGQDI-DDSTTPLEAGLGWLVNLD-TKGDFIGRSV 282
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ + + + + RK + T ++P G +L+ +G + L
Sbjct: 283 LEQQKTKGVQRKLVGLQTQGRNIPRHGYSVLSSGKTVGQVTSGTFSPTLGY 333
>gi|163868818|ref|YP_001610044.1| glycine cleavage system aminomethyltransferase T [Bartonella
tribocorum CIP 105476]
gi|161018491|emb|CAK02049.1| glycine cleavage system T protein [Bartonella tribocorum CIP
105476]
Length = 370
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 98/306 (32%), Gaps = 51/306 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL D L +R + +L Q IL +I+++EED F+
Sbjct: 59 SHMKLIAVEGAQAVEFLSYAFPIDAAALKIGQSRYNYLLNEQAGILDDLIITRLEEDRFM 118
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSW-------------------- 104
L + + +L R+ V E + V+L+
Sbjct: 119 LVANAGNAQADFVELEK---RA-VDFECHVIALERVLLALQGPEAAAVLADADLPGNELF 174
Query: 105 -------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150
Q+ + S + E V + EK+ SD + LR+
Sbjct: 175 FMQGFEPQQDWFITRSGYTGEDGFEIAVPIGHAHALAEKLLSDSRVEWIGLAARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G+ D P T P DA + G+ K + G + + R R +
Sbjct: 235 AGLCLHGNDITPDTT-PIDAALTWAVPKGVR-EKAQFYGAKAFLEALQKGPARCRVGLKP 292
Query: 209 GTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHG 261
T +G+ +L D EIG + G A+ I + L
Sbjct: 293 QTRQPIRAGAVLLDDQGKEIGVVTSGGFGPSFDGPVAMGYVPIAYKVEGTEVFTELRGKK 352
Query: 262 VRVKAS 267
+ +
Sbjct: 353 IALSVH 358
>gi|260829623|ref|XP_002609761.1| hypothetical protein BRAFLDRAFT_280302 [Branchiostoma floridae]
gi|229295123|gb|EEN65771.1| hypothetical protein BRAFLDRAFT_280302 [Branchiostoma floridae]
Length = 874
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 77/280 (27%), Gaps = 54/280 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ ++ G + FL + +V S +LTP+G++ ISK+ ED
Sbjct: 532 IDLTPFGKFEIKGPDSAKFLDHLCANNVPK--TGKTCISHMLTPRGRVYAELTISKLGED 589
Query: 64 TFILEIDRSKRDSLIDKLLFYKL-----------------------RS-----NVIIEIQ 95
F + + + L RS +
Sbjct: 590 HFFAITGSGSEFHDLRWMEDHALKGGYDVTISNITDEVACLGIAGPRSRDVLEKLTSGDL 649
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA---------------SD 140
G + + R S L + E A D
Sbjct: 650 SEEGFKFLAVHDISLGGVDVRAIRISYTGELGWELYHAREDTARLYEALMSAGQEFGLGD 709
Query: 141 IKTYHE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY LR+ G + P +A +D I L K +IG++ + ++Q
Sbjct: 710 FGTYAMGSLRLEKGFRGWGAEMTVDN-NPLEAGLDFF--IKLNKPADFIGKQALQQLQQE 766
Query: 198 NIIRKRPMI---ITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ RK + + I +G
Sbjct: 767 GLTRKLVCLTVEVEENGPDAEGNETIWHQGKVVGNTTSGA 806
>gi|90577968|ref|ZP_01233779.1| glycine cleavage system protein T2 [Vibrio angustum S14]
gi|90441054|gb|EAS66234.1| glycine cleavage system protein T2 [Vibrio angustum S14]
Length = 372
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 97/271 (35%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L+ ++ D++ LP R + G I +++ D
Sbjct: 54 SHMGQVRLKGQNAATLLETLVPVDIVDLPEGKQRYAVFTNENGGIEDDLMVTNFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117
L ++ + ++ I L + L+ V +E+ ++ + S+ F+D
Sbjct: 113 LVVNAACKEQDIAHLKAH-LKDGVELEVIEDRALLALQGPKAAMVLAELNPAVSDMVFMD 171
Query: 118 E---------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L NE + LR+
Sbjct: 172 AAKVTLLGVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202
G+ D P T P +A + G+ +G + G +++ ++Q + + RK
Sbjct: 232 CGLCLYGHDLDP-TTTPFEASLMWAITPSRRAGGV--REGGFPGADIILEQLQTKQVSRK 288
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
R ++ ++ G+ + +D EIG +
Sbjct: 289 RVGLVGQSNAPVREGTKLFDAEDNEIGIVTS 319
>gi|157372150|ref|YP_001480139.1| glycine cleavage system aminomethyltransferase T [Serratia
proteamaculans 568]
gi|166989730|sp|A8GIS1|GCST_SERP5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157323914|gb|ABV43011.1| glycine cleavage system T protein [Serratia proteamaculans 568]
Length = 365
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + R+ + + + V + ++ +V + ++
Sbjct: 110 RLVVNSATREKDLAWIEEHAAPYGVALTVRDDLALVAVQGPQAKERAATLFTP 162
>gi|296268945|ref|YP_003651577.1| glycine cleavage system T protein [Thermobispora bispora DSM 43833]
gi|296091732|gb|ADG87684.1| glycine cleavage system T protein [Thermobispora bispora DSM 43833]
Length = 364
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 96/311 (30%), Gaps = 55/311 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A L + + L AR + I+ G I+ ++ ++ D +
Sbjct: 49 LSHMGEIFVTGPQAGEALDYALVGHLSALAEGRARYTMIVNEHGGIIDDLIVYRLAGDEY 108
Query: 66 IL------------------------EIDRSKRDSLIDK--------LLF---------- 83
++ DRS +LI L
Sbjct: 109 LVVANAANTATVAAELTARAGSFDAQVTDRSAEYALIALQGPNSVAILQKLADTDVAPIP 168
Query: 84 -YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDI 141
Y +RS + ++ F+ ++A L + +
Sbjct: 169 YYGVRS---GTVAGTPALIARTGYTGEDGFELFVRAEDAVATWQALTEAGTELGLVPVGL 225
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ + + P+DA + + + G ++G+ ++R R
Sbjct: 226 AARDTLRLEAGMPLYGNELSTE-LTPYDAGLGRVVRLD-KPGDFVGRAALARAADTGPTR 283
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255
+ ++ +P SG P+L D +G + A+A D V+ + +
Sbjct: 284 RLVGLVARGRRVPRSGYPVLRDGRVVGEVTSGAPSPWLGKPIAMAYVSADAVEEGGELAV 343
Query: 256 ALTVHGVRVKA 266
+ V
Sbjct: 344 DIRGRQEPVDV 354
>gi|126317546|ref|XP_001381588.1| PREDICTED: similar to dimethylglycine dehydrogenase, [Monodelphis
domestica]
Length = 873
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 60/318 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS KV GK ++ L +I + + S +LTP+G++ +S+
Sbjct: 541 IDLSPFGKFKVRGKDSLKLLDRLIANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 598
Query: 64 TFILEIDRS--------------------KRDSLIDKL---------LFYKLRSNVIIEI 94
F+L + +++ D+L L+ +
Sbjct: 599 EFLLVTGSGSELHDLRWIEEEIVKGGYNVEVENITDELGVLGVAGPSARRVLQ-KLTSAD 657
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------- 139
+ ++ T SN + S L + E A+
Sbjct: 658 LSNDAFKFLQSKPLTISNIPVTAIKISYTGELGWELYHRQEDSATLYGAIMEAGQEEGID 717
Query: 140 DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQH 196
+ TY + LR+ ++ T P +A +D I L K +IG++ + ++
Sbjct: 718 NFGTYAMNALRMEKAFRAWGSEMNCDT-NPLEAGLDHF--IKLNKPADFIGKQALRLMKE 774
Query: 197 RNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDH 249
+ + R+ + TD + P G+ I D +G + A A ++ +
Sbjct: 775 KGLKRRLVYLTLETDHVDPEGNESIWHDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSEV 834
Query: 250 AIKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 835 GQRLEVELLGKNYPATII 852
>gi|254489967|ref|ZP_05103162.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxidans DMS010]
gi|224465052|gb|EEF81306.1| Glycine cleavage T-protein (aminomethyl transferase) [Methylophaga
thiooxydans DMS010]
Length = 383
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 90/262 (34%), Gaps = 41/262 (15%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G SA+ L ++ DV L +R +A + G ++ ++ +DT+ L
Sbjct: 71 IVNVTGPSALKVLDQLVAIDVTELEPGTSRLAAEVNEAGALVDDIMVICDAKDTYRLSHG 130
Query: 71 RSKRDSLIDKL---------LFYKLR-------SNVIIEIQPINGVVL-----SWNQEHT 109
+ +L Y + +V I + P+ V L + E T
Sbjct: 131 SGATQDTLARLAEGHDVQIAQDYDVHILSLQGPKSVDI-LDPVVDVDLKTLPYFKHVETT 189
Query: 110 FSNSSFIDERFSIADVLLHRTWGHN-----------------EKIASDIKTYHELRINHG 152
+ R + + + I + + R+
Sbjct: 190 LFGCEVVISRGGYSGERGYEVYCSANDAVHLWDSILEKGHRYGAIPASWDSLDLTRVEAA 249
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ D P + M ++ KG YIG++ ++ ++ R ++ ++ ++
Sbjct: 250 LLFFPYDMPEGDTTPWEVNMGWCIDLN-KKGDYIGKQALTNLKGRERFKQAGLVCQSSEA 308
Query: 213 LPPSGSPILTDDIEIGTLGVVV 234
+ G+ I+ D EIG + +
Sbjct: 309 V-EIGAKIIKDGKEIGEVTSAI 329
>gi|224090905|ref|XP_002188408.1| PREDICTED: similar to dimethylglycine dehydrogenase [Taeniopygia
guttata]
Length = 836
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/319 (17%), Positives = 99/319 (31%), Gaps = 62/319 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS KV G ++ L + V + S +LTP+GK+ +S++
Sbjct: 502 IDLSPFGKFKVKGTDSVKLLDHLFANVVPKV--GSTNISHMLTPRGKVYAELTVSQLFPG 559
Query: 64 TFILEI-DRSKRDSLIDKLLFYKLRS---NVIIEI-QPINGVVLSWNQEHT--------- 109
F+L S+ L + + ++R V IE GV+
Sbjct: 560 EFMLVTGSGSELHDL--RWIEEEIRRGGYKVEIENMTDEMGVLSVAGPYARQVLQKLTNE 617
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139
SN + R S L + E
Sbjct: 618 DLSNASFKFLQCRHLKLSNIAVTAIRISYTGELGWELYHRKEDSVPLYSAIMEAGQKEGI 677
Query: 140 -DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195
D TY + LR+ G + T P +A ++ + L K + G++ + +I+
Sbjct: 678 DDFGTYALNALRLEKGFRAWGAEMNCDT-NPLEAGLEYF--VKLNKAADFTGKQALKQIK 734
Query: 196 HRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
+ I R+ + TD++ P G+ + + IG A A ++
Sbjct: 735 EKGIKRRLVYLTLETDNVDPEGNESVWHNGKVIGNTTSGCFSYGAQKSLAFAYVPMELSK 794
Query: 249 HAIKKGMALTVHGVRVKAS 267
K + L
Sbjct: 795 VGQKLEVELLGKNYPATII 813
>gi|195033602|ref|XP_001988718.1| GH10422 [Drosophila grimshawi]
gi|193904718|gb|EDW03585.1| GH10422 [Drosophila grimshawi]
Length = 415
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 94/304 (30%), Gaps = 59/304 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
V G A L++I TAD+L + + QG IL +++K+ + +
Sbjct: 92 VRGSDAAACLESISTADILGMLPGAGSLTVFTNEQGGILDDLIVNKVSDKELYVVSNAAM 151
Query: 69 -----------------------------IDRSK--------RDSLIDKL-------LFY 84
+D+S L L Y
Sbjct: 152 KQQDADIMSSAVSFFKSQGKDVSIEFLSPVDQSLIAVQGPQVAQELAKLLSQPKSLDQLY 211
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+RS + E+ I V ++ + + L + + +
Sbjct: 212 FMRSGI-FELAGIKNVRITRCGYTGEDGFEISVP-STKVESLTEALLAAGQLKLAGLGAR 269
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LR+ G+ +D + P +A + L G + G +++ + + R+R
Sbjct: 270 DSLRLEAGLCLYGSDI-DAKTTPVEAALAWLVAKRRRSTGDFPGAQLILQQLKEGVQRRR 328
Query: 204 P-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMAL 257
+ + G P +G I + ++G L + +A+ + + A + L
Sbjct: 329 IGLQMLGAKPPPARAGVTIYSGGKQVGQLTSGCPSPTTGRNIAMGYVAEQLKAPGTQLEL 388
Query: 258 TVHG 261
V
Sbjct: 389 KVRD 392
>gi|54023664|ref|YP_117906.1| glycine cleavage system aminomethyltransferase T [Nocardia
farcinica IFM 10152]
gi|59797669|sp|Q5YZ49|GCST_NOCFA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54015172|dbj|BAD56542.1| putative glycine cleavage system protein T [Nocardia farcinica IFM
10152]
Length = 366
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 52/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A +T D+ + A+ + + G ++ + + +D
Sbjct: 54 SHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIF 113
Query: 67 LEIDRSKRD--------------SLIDKLLFYKLR-------SNVIIEI------QPING 99
L + + ++ D+ Y + + V+ + + +
Sbjct: 114 LVPNAANTAAVVAELAAAAPAGVTVTDQHRDYAVFAVQGPRSAQVLAALGLPTEMEYMAF 173
Query: 100 VVLSWNQEH--------TFSNSSFIDERFSIADVLLHRTWGH---NEKIASDIKTYHELR 148
+W+ T + + R++ A+ + + + + LR
Sbjct: 174 ADAAWDGRPIRVCRTGYTGEHGYEVLPRWADAEPVFRALLEQVRAADGQPAGLGARDTLR 233
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + I P A + K + G+ + + + R+ M +
Sbjct: 234 TEMGYPLHGHELSRE-ISPVQARTGW--AVGWRKPQFWGKAALEQEKAAG-PRRILMGLK 289
Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH--- 260
D + G P+L D +G K +A+A +D ++ G + V
Sbjct: 290 AIDRGVLRQGQPVLRDGEPVGETTSGTFSPTLKVGIALALLD-TGAGLEPGAEVAVDVRG 348
Query: 261 -GVRVKASFPH 270
+R + P
Sbjct: 349 RRLRCEVVKPP 359
>gi|54296113|ref|YP_122482.1| glycine cleavage system aminomethyltransferase T [Legionella
pneumophila str. Paris]
gi|61213305|sp|Q5X8W1|GCST_LEGPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|53749898|emb|CAH11280.1| hypothetical protein lpp0132 [Legionella pneumophila str. Paris]
Length = 360
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 99/313 (31%), Gaps = 53/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
+ ++ + R + + + R+ V ++ + ++ S +
Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164
Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144
F DV L + +
Sbjct: 165 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLNAGVTPCGLGAR 224
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ D T P ++ + +IG ++ + + I RK
Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALASQKQQGIKRKMV 283
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + G ++ + G + +++A+AR+ V+ + + +
Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342
Query: 261 GVRVKASFPHWYK 273
+ K P + K
Sbjct: 343 LIPAKVGKPRFIK 355
>gi|331006917|ref|ZP_08330162.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC1989]
gi|330419237|gb|EGG93658.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC1989]
Length = 378
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/310 (18%), Positives = 106/310 (34%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G + L+ ++ DV L + + G IL +I++ EDTF
Sbjct: 57 SHMGQLTVSGDGIVEALEKLLPIDVGALDIHQQSYALLTNDDGGILDDLIITRWAEDTFF 116
Query: 67 LEIDRSKRDSLIDKLLFY-------KLRSNVIIEIQP-----INGVVLSWNQEHTFSNSS 114
+ ++ + ++ I + L S ++ +Q + V+ E TF +
Sbjct: 117 IVVNAACKEQDIAHFRKHLPNATIEILSSRALVALQGPSAKNVAEVIAPIACELTFMHGC 176
Query: 115 FI--------------------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148
F+ ++ F I AD + + A + LR
Sbjct: 177 FVTVDCNGTAVECYFTRSGYTGEDGFEISIPNEHADAVARLLLSFDCVEAIGLGARDSLR 236
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKR 203
+ G+ D T P DA + S G ++G + + + RKR
Sbjct: 237 LEAGLCLYGHDMNTET-NPIDASLLWSISKSRRPDGAKAGGFLGTDNIFSSIEKGSDRKR 295
Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALT 258
++I G + + DD +G + K +AI +K A+ +
Sbjct: 296 VGLLIDGRAPVREGAVLVDADDNTVGVVTSGGFGPSINKPIAIGYANKTSAALGTELFAL 355
Query: 259 VHGVRVKASF 268
V G ++ S
Sbjct: 356 VRGKKLPVSV 365
>gi|157376807|ref|YP_001475407.1| glycine cleavage system aminomethyltransferase T [Shewanella
sediminis HAW-EB3]
gi|189039475|sp|A8FZK6|GCST_SHESH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157319181|gb|ABV38279.1| glycine cleavage system T protein [Shewanella sediminis HAW-EB3]
Length = 364
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 46/308 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLTDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V I +P ++ + + F D + + +
Sbjct: 110 RVVVNSATREKDLAWIAEQVKGFDVEIVERPELAMIAVQGPNAKAKAATVFNDAQNAAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + + LR+
Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPEDEAQALWQGLLEAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P A M + G+E ++ I+ + +I+
Sbjct: 230 EAGMNLYGLDM-DETVNPLAANMGWTIAWEPQDRDFNGREALAAIKAAGTEKLVGLIMEA 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIARIDKVDHAIKKGMALTVHGV 262
+ P S TD + G + ++A+AR+ + + + V
Sbjct: 289 KGVIRPGMSVFFTDGEGVEQQGTITSGTFSPTLGYSIAMARVPRSIGD-TAEVEMRKKRV 347
Query: 263 RVKASFPH 270
VK P
Sbjct: 348 SVKVVAPS 355
>gi|89093756|ref|ZP_01166702.1| aminomethyltransferase [Oceanospirillum sp. MED92]
gi|89081886|gb|EAR61112.1| aminomethyltransferase [Oceanospirillum sp. MED92]
Length = 368
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 49/311 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS-----KI 60
S+ + + V G A +L+ ++ DV L A S +L ++ ++ +
Sbjct: 50 SHMTVVDVTGTDAKEYLRYLLANDVAKLQQKGKAMYSGMLNEDAGVIDDLIVYLMTEPGV 109
Query: 61 EEDTFILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFIDE 118
+ F + ++ + R+ + + +V + QP V + + + S +
Sbjct: 110 AGEWFRVVVNCATREKDLRWMSDQTASFDDVALTEQPDLAMVAVQGPKALELAKQSVSES 169
Query: 119 RFSIADVL-----------------------------------LHRTWGHNEKIASDIKT 143
R ++ D L + +
Sbjct: 170 RATLIDQLSVFQGLESEGWFIARTGYTGEDGLEIMLPEDEVADFWQALADAGVSPCGLGA 229
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G+ D T+ P A M + +IG+E + + I K
Sbjct: 230 RDTLRLEAGMNLYGADM-DETVSPLAANMGWTIAWEPQERIFIGREALQAKKEAGISEKL 288
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTV 259
++ + + + ++ + G + A+A+AR+ A + + +
Sbjct: 289 VGLVMESRGVLRAHQKVVVSGVGEGEITSGTFSPTLGCAIAMARV-PSATADQAEVDIRG 347
Query: 260 HGVRVKASFPH 270
V V+ P
Sbjct: 348 KLVPVRVIRPS 358
>gi|224001432|ref|XP_002290388.1| sarcosine dehydrogenase [Thalassiosira pseudonana CCMP1335]
gi|220973810|gb|EED92140.1| sarcosine dehydrogenase [Thalassiosira pseudonana CCMP1335]
Length = 895
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 55/277 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + TA+V + L G++ ++K++ED F++ +
Sbjct: 571 VTGNDAGTFLNYLSTANVDD-ECGTITYTQWLNEGGRMEADLTVAKLKEDKFLVVASDTM 629
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------------TFSNSSF 115
+ ++ + +++ N + + + G N + F +++
Sbjct: 630 HNQVLSHM-RHRISRNDHVYVSDVTGTYAQLNLQGPKSRKLLQQLTSVDMDMLPFRSATE 688
Query: 116 IDE--------RFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRIN 150
ID R + L + + E + + ++ LR+
Sbjct: 689 IDLGYARVWCMRITYVGELGYEVYIPVENASYCYDLIVERGESFGMAHAGLRALGSLRLE 748
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR----IQHRNIIRKRPM 205
G D D + + + K +IG++ V + + + +R+R +
Sbjct: 749 KGYRDFGHDMDNTDTL-LECGLSFTC--DFGKPVGFIGKDEVLKEKELSKSQGGLRRRMV 805
Query: 206 IITGTDDLP--PSGSPILTDDIEIGTLGVVVGKKALA 240
+ +D P G + + +G + L
Sbjct: 806 NVLVSDPKPLLHHGEILWRNGRRVGDIRSASYGHTLG 842
>gi|260205508|ref|ZP_05772999.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
tuberculosis K85]
Length = 367
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 64/317 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 55 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 114
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 115 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 174
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 175 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 234
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--------------RI 194
G + I P A + K + G+ + R+
Sbjct: 235 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAEPRRLLRGLRM 291
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKK 253
R ++R ++ G + + + S + +++G LA+ D ++ +
Sbjct: 292 VGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVG--------IGLALIDSDAGIEDGQQI 343
Query: 254 GMALTVHGVRVKASFPH 270
+ + V + P
Sbjct: 344 NVDVRGRAVECQVVCPP 360
>gi|254386545|ref|ZP_05001846.1| aminomethyltransferase [Streptomyces sp. Mg1]
gi|194345391|gb|EDX26357.1| aminomethyltransferase [Streptomyces sp. Mg1]
Length = 371
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G A+ L A++ + T+ AR + I G I+ ++ ++ E
Sbjct: 52 LSHMGEITLTGPEAVKALDYALVGN-ISTVGVGRARYTHICQEDGGIVDDLIVYRLGETE 110
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
F++ + S ++D L V+ + + ++ E +S D
Sbjct: 111 FMVVANASNAQVVLDALTERAAGFDTVVRDDRDAYALLAVQGPESPGILASLTDADLDGL 170
Query: 121 ----------SIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146
+ L+ RT E ++ +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPEHAVELWQALTKAGEGVGLVPAGLSC 230
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG--QEVVSRIQHRNII 200
LR+ G+ + ++ P DA + + + K G ++G + +
Sbjct: 231 RDTLRLEAGMPLYGHELTT-SLTPFDAGLGRV--VKFEKEGDFVGRAALEAAAERAAGNP 287
Query: 201 RKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
++ + + +P +G P++ IG + L A+A +D A
Sbjct: 288 PRKLVGLIAEGRRVPRAGFPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 342
>gi|270264929|ref|ZP_06193193.1| aminomethyltransferase [Serratia odorifera 4Rx13]
gi|270041227|gb|EFA14327.1| aminomethyltransferase [Serratia odorifera 4Rx13]
Length = 365
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + RD + + + + + ++ +V + ++
Sbjct: 110 RLVVNSATRDKDLAWIEEHAAPYGIELRVRDDLALVAVQGPQAKERAATLFTP 162
>gi|52627484|gb|AAU26225.1| glycine cleavage system T protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 367
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 98/317 (30%), Gaps = 61/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D +
Sbjct: 57 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
+ ++ + R + + + R+ V ++ + ++ S +
Sbjct: 117 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 171
Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144
F DV L H +
Sbjct: 172 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLHAGVTPCGLGAR 231
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ D T P ++ + +IG + + + I RK
Sbjct: 232 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 290
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + G ++ + G + +++A+AR+ ++ G + V
Sbjct: 291 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-----PMETGEQVLVD 345
Query: 261 ----GVRVKASFPHWYK 273
+ K P + K
Sbjct: 346 IRGKLIPAKVGKPRFIK 362
>gi|148262422|ref|YP_001229128.1| glycine cleavage system T protein [Geobacter uraniireducens Rf4]
gi|146395922|gb|ABQ24555.1| glycine cleavage system T protein [Geobacter uraniireducens Rf4]
Length = 363
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 86/249 (34%), Gaps = 41/249 (16%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LI 78
L+ + T V ++P +R +L G I+ ++ ++ ED ++ ++ + D+ +
Sbjct: 68 LENVFTFSVKSIPVGRSRYGFLLNENGGIIDDLIVFRLAEDAVMIVVNAATIDNDFSVIQ 127
Query: 79 DKLLFYKLRS-------NVIIE-IQPINGVVLSWNQEHT-----------FSNSSFIDER 119
+L + S + I+ + +V ++ E I R
Sbjct: 128 SRLKPGGVFSNTSADTGKLDIQGPLSRDVLVQAFGPEIGKIPYFKFIRMNILGVEAIVSR 187
Query: 120 FSIADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTI 165
L + + +K+ + + LR+ G +D
Sbjct: 188 TGYTGELGYEIFLPAQKVVELWDLLLGDERVKPAGLGARDVLRLEVGYSLYGSDI-DEVT 246
Query: 166 FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225
P +A + ++ K ++G+E + + Q + + + + P I ++
Sbjct: 247 TPLEAGLGAF--VNFDKQ-FVGREALLKQQQTGLTKAKAAFQVSSRRAPRHHYEICSEGA 303
Query: 226 EIGTLGVVV 234
+GT+ V
Sbjct: 304 AVGTVTSGV 312
>gi|167762610|ref|ZP_02434737.1| hypothetical protein BACSTE_00966 [Bacteroides stercoris ATCC
43183]
gi|167699716|gb|EDS16295.1| hypothetical protein BACSTE_00966 [Bacteroides stercoris ATCC
43183]
Length = 363
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + +V L + + G I+ L+ + E++ ++L ++ S
Sbjct: 56 VKGPHALDFLQTVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYRYEQEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D++ ++ I +Q + V LS +TF++ F
Sbjct: 116 IEKDWNWCMSHNTMGAELENASDRMAQLAVQGPKAIEALQKLTPVNLSELSYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E I + G E + IK ++ LR+ G
Sbjct: 176 AGEPDVIISNTGYTGAGGFELYFYPEAAIKIWNAVFEAGAEFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K +I + ++ + + +RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FINRPMLEKQKTEGTVRKLVGFEMVDRG 293
Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + + IG + + + + + + + ++
Sbjct: 294 IPRHGYELQNPEGTPIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVRPP 358
>gi|13474013|ref|NP_105581.1| aminomethyltransferase [Mesorhizobium loti MAFF303099]
gi|14024765|dbj|BAB51367.1| aminomethyltransferase [Mesorhizobium loti MAFF303099]
Length = 375
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/318 (13%), Positives = 98/318 (30%), Gaps = 63/318 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + G A + +I D + + R S + G I+ + ++ + F
Sbjct: 55 LSTMGKMDIKGPDAEALVNHVIVNDAVAMKPGQVRYSTVCREDGGIMDDLTVFRLGPEHF 114
Query: 66 ILEIDRSKRDSLIDKLLFYKL---------------------RS----NVIIEIQPINGV 100
+L R ++ L + RS +I ++G+
Sbjct: 115 MLVTGSVNRLKMLPWLQHHAQGRKAYVTDITAAVAFPTIQGPRSRELLKAMISDADLDGL 174
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELR---------- 148
+ F++ R I+ + G + +D + L
Sbjct: 175 -----KRWAFTSGHVNGTRVLISRTGVTGELGFELFVPADEAASVWDTLMRAGKDFGLKP 229
Query: 149 ----------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ D T P +D I KG +IG+E + +I+ +
Sbjct: 230 YGVLAMFTLGLEKAYPAHGIDM-DETRTPFHVGLDRW--IKFDKGDFIGREALLKIRDKG 286
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH------AIK 252
+ + +I + + + +L D + G + ++ ++ H AI
Sbjct: 287 LDERWTGLILDGNKPAATDARVLADGEDAGIVT--YSDHGYSLGKVLATAHLRLPFTAIG 344
Query: 253 KGMALTVHGVRVKASFPH 270
+++ + G +A
Sbjct: 345 TELSIDIDGRPTRAVVAP 362
>gi|254524776|ref|ZP_05136831.1| glycine cleavage system T protein [Stenotrophomonas sp. SKA14]
gi|219722367|gb|EED40892.1| glycine cleavage system T protein [Stenotrophomonas sp. SKA14]
Length = 370
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G PFL+ ++ V L A S +L P+G ++ ++ + +D F
Sbjct: 50 SHMTVVDLRGDQVKPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ S R+ + L V ++ +P ++ + E A
Sbjct: 110 RMVVNASTREKDLAWLREQAAPFGVSVQQRPDLAILAVQGPQARDIVIGLAGEADRAALG 169
Query: 126 LLHR 129
L R
Sbjct: 170 KLGR 173
>gi|270158570|ref|ZP_06187227.1| glycine cleavage system T protein [Legionella longbeachae D-4968]
gi|289166599|ref|YP_003456737.1| glycine cleavage system protein T [Legionella longbeachae NSW150]
gi|269990595|gb|EEZ96849.1| glycine cleavage system T protein [Legionella longbeachae D-4968]
gi|288859772|emb|CBJ13753.1| putative glycine cleavage system protein T [Legionella longbeachae
NSW150]
Length = 360
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G FL+ ++T DV L + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDVLGAGCRQFLRKLLTNDVDLLEHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDSLIDKLLF 83
+ ++ + R++ + +
Sbjct: 110 RIILNSATRENDLAWIRK 127
>gi|229270459|ref|YP_094172.2| glycine cleavage system aminomethyltransferase T [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|61213326|sp|Q5ZZ93|GCST_LEGPH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 360
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 98/317 (30%), Gaps = 61/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
+ ++ + R + + + R+ V ++ + ++ S +
Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164
Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144
F DV L H +
Sbjct: 165 VDAVSTLTSFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLHAGVTPCGLGAR 224
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ D T P ++ + +IG + + + I RK
Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + G ++ + G + +++A+AR+ ++ G + V
Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-----PMETGEQVLVD 338
Query: 261 ----GVRVKASFPHWYK 273
+ K P + K
Sbjct: 339 IRGKLIPAKVGKPRFIK 355
>gi|312216620|emb|CBX96570.1| similar to glycine cleavage T protein (aminomethyl transferase)
[Leptosphaeria maculans]
Length = 850
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 85/272 (31%), Gaps = 55/272 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A LQ + T+D+ + ++ G +L +S++E++ + ++ +
Sbjct: 515 EISGPGATNLLQGLTTSDISK-KPGNITHTLLVDAYGGVLSDIFVSRLEDNVY--QVGAN 571
Query: 73 KRDSLIDKLLFYKLRSNVII-------EIQPINGVVLSWNQEH-----TFSNSSFIDERF 120
L+ + +S +I + W T S+ F ++
Sbjct: 572 TATDLVHLARKARKQSKETPSQWAQVRDITGSTCCLGLWGPRAGDVILTVSSEDFSNKGL 631
Query: 121 SIADV-------------------------------------LLHRTWGHNEKIASDIKT 143
V +L ++ + +A+
Sbjct: 632 PYMGVKKTIIAGIPVTMFRKSFVGEYGWEIQTSPEYGLRLWDMLWQSGQPHGLVAAGRAA 691
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202
++ LRI GI +D P +A + + K Y+G+ + + + R+
Sbjct: 692 FNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQLD-KKTDYVGKTALEHLSKKAPKRRL 749
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R +I+ + P+ G +
Sbjct: 750 RCLIVDDGRSMILGKEPVFVAGKRAGYVTSAA 781
>gi|289574897|ref|ZP_06455124.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis K85]
gi|289539328|gb|EFD43906.1| aminomethyltransferase gcvT [Mycobacterium tuberculosis K85]
Length = 379
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 64/317 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + +T D+ + A+ + T G ++ + + +D
Sbjct: 67 SHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIF 126
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPIN--GVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q V+ + +
Sbjct: 127 LVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGY 186
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HELR 148
D +S V + RT E + + LR
Sbjct: 187 ADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLR 246
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS--------------RI 194
G + I P A + K + G+ + R+
Sbjct: 247 TEMGYPLHGHELSLD-ISPLQARCGW--AVGWRKDAFFGRAALLAEKAAEPRRLLRGLRM 303
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDK-VDHAIKK 253
R ++R ++ G + + + S + +++G LA+ D ++ +
Sbjct: 304 VGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVG--------IGLALIDSDAGIEDGQQI 355
Query: 254 GMALTVHGVRVKASFPH 270
+ + V + P
Sbjct: 356 NVDVRGRAVECQVVCPP 372
>gi|227819885|ref|YP_002823856.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234]
gi|36958750|gb|AAQ87218.1| Dimethylglycine dehydrogenase [Sinorhizobium fredii NGR234]
gi|227338884|gb|ACP23103.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234]
Length = 815
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 55/291 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+++ I++ G+ A FLQ + + + + +L +G I ++++ + F
Sbjct: 489 MTSFGKIRIEGRDATAFLQRVCANQMD-VEPGRIVYTQMLNQRGGIESDLTVTRLSQTAF 547
Query: 66 ILEIDRSKRDSLIDKLLF------YKLRSNVIIEIQ------PINGVVLSWNQEHTFSNS 113
+ + + L + + ++V P V++ + FSN
Sbjct: 548 FAVVPGATLQRDLAWLRKQLRPEEFVVITDVTASESVLVLMGPKARNVITRVSPNDFSNE 607
Query: 114 SFI---------------DERFSIADVLLHRTWGHNEKIA-----------------SDI 141
SF R + L + +++ A +
Sbjct: 608 SFPFGTAQEIEIGMGLARAHRVTYVGELGWELYVSSDQTAHVFEAIEEAGKSSGLKLCGL 667
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI D +A + + KG +IG++ V R + + R
Sbjct: 668 HALDSCRIEKAFRHFGHDITDEDHV-LEAGLGF--AVKTAKGEFIGRDAVLRKREEGLKR 724
Query: 202 KRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARID 245
+ + + L ++ D + + G L D
Sbjct: 725 RLVQFRLKDPEPLLFHNEALVRDGKIVSIVTSGNYGHHLGGAIGLGYVPCD 775
>gi|317493818|ref|ZP_07952235.1| glycine cleavage system T protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918145|gb|EFV39487.1| glycine cleavage system T protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L ++ ++ +EE+ F
Sbjct: 50 SHMTIVDLRGPRTREFLRYLLANDVAKLTVPGKALYTGMLNASAGVIDDLIVYFLEEEYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + +V I ++ ++ + ++
Sbjct: 110 RLVVNSATREKDLAWITEHAEPYHVDITVRDDLALIAVQGPQAQERAATL 159
>gi|29833493|ref|NP_828127.1| sarcosine dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29610616|dbj|BAC74662.1| putative sarcosine dehydrogenase [Streptomyces avermitilis MA-4680]
Length = 818
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 59/306 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ FL + T ++ + +L G I ++++ D F +
Sbjct: 512 LEVSGPGALDFLHRMTTNNLRK-KPGAVTYTLLLDHTGGIRSDLTVARLGPDRFQV---G 567
Query: 72 SKRDSLIDKLLFYK------------------------------------------LRSN 89
+ + +D L + R+
Sbjct: 568 ANSPADLDWLTRHAPDGVHIRDITSGTCCIGVWGPLARDLVQPLTRDDFSHEGFGYFRAK 627
Query: 90 VI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ P+ + LS+ E + + D + D L + IA+ ++ LR
Sbjct: 628 ETYLGHVPVTAMRLSYVGELGWELYTTADLGLRLWD-TLWEAGRKHGVIAAGRSAFNSLR 686
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G TD P +A + + + K ++G+E + +R +
Sbjct: 687 LEKGYRAWGTDMTDEHD-PFEAGVGF--AVRMDKE-FVGREALDAA---APPTRRLTPLL 739
Query: 209 GTDDLPP--SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVH--GVRV 264
D P+ D + G + L + G + + G +V
Sbjct: 740 LDDPAANVLGKEPVYVDGVPSGYVTSASYGYTLGRCVAYAWLPPLATGTGVHIEYFGEKV 799
Query: 265 KASFPH 270
A+
Sbjct: 800 PATVAE 805
>gi|302558258|ref|ZP_07310600.1| glycine cleavage system T protein [Streptomyces griseoflavus
Tu4000]
gi|302475876|gb|EFL38969.1| glycine cleavage system T protein [Streptomyces griseoflavus
Tu4000]
Length = 372
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 95/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + ++ AR + I G IL ++ ++ +
Sbjct: 53 LSHMGEIAVTGPQAAALLDHALVGN-IGSVKPGRARYTMICREDGGILDDLIVYRLGDTE 111
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
+++ + S ++D L + + + ++ E S D
Sbjct: 112 YLVVANASNAQVVLDALRERTAGFDAEVRDDRDAYALLAVQGPESPAILKSLTDADLDGL 171
Query: 121 ----------SIADVLLHRTWGHNE-------KIASDIKTYHE----------------- 146
+ L+ RT E K ++ +
Sbjct: 172 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVELWQALTKAGEGAGLVPCGLSC 231
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + ++ P DA + + + K G ++G+ ++ R
Sbjct: 232 RDTLRLEAGMPLYGNELST-SLTPFDAGLGRV--VKFEKEGDFVGRAALAEAAERAASEP 288
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
R ++ +P SG ++ IG + L A+A +D A
Sbjct: 289 PRVLVGLVAEGRRIPRSGYAVVAGGEVIGEVTSGAPSPTLGKPIAMAYVDAAHAA 343
>gi|116619623|ref|YP_821779.1| glycine cleavage system aminomethyltransferase T [Candidatus
Solibacter usitatus Ellin6076]
gi|116222785|gb|ABJ81494.1| glycine cleavage system T protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 367
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 47/270 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G A + T V L A S +L G + L+ K+ +D F
Sbjct: 55 SHMGEIEIRGPEAAKLTDHVTTNAVHKLKLGQAHYSGLLYEHGGFVDDILVHKVADDHFF 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWNQEHTFSNS---- 113
L ++ S +D + + + V+ I IQ +
Sbjct: 115 LCVNASNQDKDFEHIRAHNKFDAVVENNGDRYAQIAIQGPKAAATLQKLTPVDLGAIKYY 174
Query: 114 SFIDERFSIADVLLHRTWGHNEKIASDIKTY----HELRINHGIVDPNTDF--------- 160
F D S + T E + Y +R+ ++D +F
Sbjct: 175 WFTDGEVSGTPARIAHTGYTGED---GFEIYVPPSEAVRMWQLVMDAGAEFGIKPCGLGA 231
Query: 161 ----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+ ++I P +A + + + L KG ++G + + + I RK
Sbjct: 232 RNTLRLEAKMALYGHEIDASISPLEADLGWI--VKLDKGEFVGSAALRKQKESGIQRKLI 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ G + D G +
Sbjct: 290 GFEMCARGIGRDGYEVFLDGAAAGWVTSGS 319
>gi|226945249|ref|YP_002800322.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
gi|226720176|gb|ACO79347.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDT 64
L++ + + G FL ++ D+ L + + +L G ++ ++ +++ D
Sbjct: 52 LTH---LDIQGPDTRKFLLRLLANDIDRLDRPGKSLYTTMLNDDGGVMDDLIVHRLDYDR 108
Query: 65 FILEIDRSKRDSLIDKLL 82
+ L ID + D + +
Sbjct: 109 YRLIIDADRSDRDLAWIK 126
>gi|170023116|ref|YP_001719621.1| glycine cleavage system aminomethyltransferase T [Yersinia
pseudotuberculosis YPIII]
gi|238688502|sp|B1JNS6|GCST_YERPY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169749650|gb|ACA67168.1| glycine cleavage system T protein [Yersinia pseudotuberculosis
YPIII]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ ++ +
Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152
>gi|110835455|ref|YP_694314.1| glycine cleavage system T protein [Alcanivorax borkumensis SK2]
gi|122959246|sp|Q0VLA6|GCST_ALCBS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|110648566|emb|CAL18042.1| glycine cleavage system T protein [Alcanivorax borkumensis SK2]
Length = 359
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 45/278 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + + G A +L+ ++ DV + A + +L G ++ ++ K + D +
Sbjct: 50 SHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYKRDND-YR 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--- 123
L ++ + R++ + + + V I +P ++ + + ++ + A
Sbjct: 109 LVVNCATRETDLGWMEKHAGGFAVDIHERPELAMLAIQGPKARDILAGLLNGSRADAVKS 168
Query: 124 ----------DVLLHRTWGHNE-------KIASDIKTY----------------HELRIN 150
D ++ RT E A + + LR+
Sbjct: 169 LKVFAFAEDGDWMIARTGYTGEDGVEIMLPNADALTLWEQLLEAGVSPIGLGARDTLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D +I P +A M ++ + +IG++ + + + +I+ G
Sbjct: 229 AGLNLYGNDM-DESITPWEANMGWTVMLNDRE--FIGRQPLLNQKENGHSEQVGLILEGK 285
Query: 211 DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244
L ++ + E GT +GK +A+AR+
Sbjct: 286 GVLRAHQKVLMPNGEEGEITSGTFSPTLGKS-IALARL 322
>gi|91763114|ref|ZP_01265078.1| aminomethyl transferase family protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91717527|gb|EAS84178.1| aminomethyl transferase family protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 380
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 102/294 (34%), Gaps = 70/294 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A F+Q + D+ L + I+ G IL ++ +++E+ + L + D
Sbjct: 67 VEITGPDATKFIQLLTPRDLSKLAVGQCKYVLIVNNDGGILNDPVLLRLKENHYWLSLAD 126
Query: 71 RSKRDSLIDKLLFYKLRSN---------VII---EIQP-------------------ING 99
L + V I ++ P IN
Sbjct: 127 SDIL-----------LWAQGVAINSGLNVKIIEPDVSPLQLQGPNSGKIMEALFGESIND 175
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN--------EKIASDIKTYHE----- 146
+ W +E I R + L + + + EKI + K+Y
Sbjct: 176 LKYYWLRELDLDGIPLIVSRTGWSSELGYELYLRDGSKGDELWEKIMAAGKSYGLKPGHT 235
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
RI G++ + D +T P++ + L + +IG++ + +I + RK+
Sbjct: 236 SSIRRIEGGMLSYHADADINT-NPYELNLGRLVNLDTDIN-FIGKDALQKINKDGVKRKQ 293
Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
+I D L + IL D +G + V ALA+ I+ +
Sbjct: 294 VGMILDCDPLTGPNTTFWEILKDKQIVGKITSAVYSPRLKQNIALAMVTINNSE 347
>gi|301308815|ref|ZP_07214767.1| glycine cleavage system T protein [Bacteroides sp. 20_3]
gi|300833339|gb|EFK63957.1| glycine cleavage system T protein [Bacteroides sp. 20_3]
Length = 361
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 54/307 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ F+Q++ + D LP A+ + +G I+ L+ E + ++L ++
Sbjct: 56 VKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSN-----VIIEI 94
K ++ +L L S + E
Sbjct: 116 IDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFITGEF 175
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRIN 150
V++S + + + K + LR+
Sbjct: 176 AGCKNVIISNTGYTGAGGFELYF--YPSDGMTIWNAIFEAGKPEGIKPIGLGARDTLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G D T P +A + + + K + + + R + + RK
Sbjct: 234 MGFCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRAELERQKKEGVTRKLCAFELQE 291
Query: 211 DDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+P G I + IG + + + + + + ++
Sbjct: 292 KGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLK 351
Query: 264 VKASFPH 270
+
Sbjct: 352 AQVVKAP 358
>gi|188534918|ref|YP_001908715.1| glycine cleavage system aminomethyltransferase T [Erwinia
tasmaniensis Et1/99]
gi|238689740|sp|B2VF35|GCST_ERWT9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|188029960|emb|CAO97844.1| Aminomethyltransferase (Glycine cleavage system T protein) [Erwinia
tasmaniensis Et1/99]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 99/308 (32%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A SA+L ++ ++ I ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSAMLNASAGVIDDLIVYFISEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ERFSIA 123
L ++ + R+ + ++ + V + + ++ S D +R +++
Sbjct: 110 RLVVNSATREKDLAWIVEHAAAYGVQLTERDDLSLIAVQGPNAQQKAQSVFDDAQRDAVS 169
Query: 124 ---------------------DVLLHRTWGHNEKIASDIKTY-------------HELRI 149
+ NE A + LR+
Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNELAAEFWQQLLAAGVRPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + + P A M G + +IG+E++ + + R
Sbjct: 230 EAGMNLYGQEM-DEKVSPLAANMSWTIGWEPSDRQFIGREMLEIQRTKGTERLVGLIMTE 288
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
K + + +L I G+ +G +A+AR+ + + +
Sbjct: 289 KGVLRNALPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGEQAVVQIRNRA 346
Query: 262 VRVKASFP 269
+ V + P
Sbjct: 347 MPVTVTKP 354
>gi|119503920|ref|ZP_01626002.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
gi|119460428|gb|EAW41521.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
Length = 395
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F+Q + D+ L + I G IL ++ ++ ED F L +
Sbjct: 71 VQITGPDAARFVQLLTPRDLSKLAVGQCKYVMITNNDGCILNDPVLLRLAEDKFWLSLAD 130
Query: 72 SK----RDSLIDKLLFYK---------LR---------SNVIIEIQPINGVVLSWNQEHT 109
S + L+ + V+ I + W +E+T
Sbjct: 131 SDILLWAQGVAVNAGMDVHICEPDVSPLQLQGPNSGEIAKVLFG-DDIADLRYYWLREYT 189
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELRINHGI 153
I R + L + + + D+ RI G+
Sbjct: 190 LDGIPLIVSRTGWSSELGYEIYLLDGSRGDDLWEAIMAAGEPFGLKPGHTSTIRRIEGGM 249
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ + D + P + + I ++G+ ++ I+ + R++ + + L
Sbjct: 250 LSYHADM-DNQTNPFEVGLGHWAAIDTDLE-FVGKAALTAIRDAGVTRQQVGLEIDGEAL 307
Query: 214 PPSGS---PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV-HGVRVK 265
P + + D+ +G + V L A+A +D A+ +A+ + GVR+
Sbjct: 308 PAPNTRFWELSVDEAPVGKVTSAVYSPRLKKNIALAMVDCAAAALGTEIAVAMPDGVRLA 367
Query: 266 ASF 268
Sbjct: 368 TVV 370
>gi|90019987|ref|YP_525814.1| glycine cleavage system aminomethyltransferase T [Saccharophagus
degradans 2-40]
gi|123396728|sp|Q21NX7|GCST_SACD2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|89949587|gb|ABD79602.1| glycine cleavage system T protein [Saccharophagus degradans 2-40]
Length = 363
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 92/281 (32%), Gaps = 44/281 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLIS------- 58
S+ + + V G A FLQ ++ DV L A S +L +G ++ ++
Sbjct: 50 SHMTVVDVTGAGAKTFLQYVLANDVAKLTKNGKALYSGMLNHEGGVVDDLIVYLMEWGYR 109
Query: 59 -------KIEEDTFILEIDRSKRDSLIDK--LLFYKLR--------SNVIIEIQPINGVV 101
+ ++ +++E + +L ++ L ++ + ++ E+ ++ +
Sbjct: 110 VVVNCATREKDLAWMVEHAKGFEVALNERDDLAMIAVQGPAAREKTAQILPELLTMDLDI 169
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148
+ +F R R + LR
Sbjct: 170 FQGADVAALGDVTFFVARTGYTGEDGYEIMLPTSDADAFWRALMAVGVAPCGLGARDTLR 229
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ + +T P A M + +IG+E +S + + K ++
Sbjct: 230 LEAGMNLYGHEMDDNTS-PLVANMAWTIAWQPEERNFIGREAISAEKAAGVTHKLVGLVL 288
Query: 209 GTDDLPPSGSPILTDDIEI-GTLGVVVGKKAL----AIARI 244
+ + + + +E G + L A+AR+
Sbjct: 289 QDRGVLRAEQVVTCEGVEGEGVITSGTFSPTLSKSVALARV 329
>gi|239982431|ref|ZP_04704955.1| glycine cleavage system aminomethyltransferase T [Streptomyces
albus J1074]
gi|291454277|ref|ZP_06593667.1| glycine cleavage system aminomethyltransferase T [Streptomyces
albus J1074]
gi|291357226|gb|EFE84128.1| glycine cleavage system aminomethyltransferase T [Streptomyces
albus J1074]
Length = 374
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 57/298 (19%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISK---IE 61
LS+ I V G A FL A++ + T+ AR + I G IL ++ + +E
Sbjct: 52 LSHMGEITVLGPDATRFLAYALVGN-IATIGPGRARYTMICQEDGGILDDLIVYRRGPVE 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120
F++ + ++D L +V + + + ++ +S D
Sbjct: 111 SPEFMVVANAGNAQVVLDALTGRAASFDVEVRDDRDAYALIAVQGPASPAILASVTDADL 170
Query: 121 -------------SIADVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
+ + L+ RT E + +
Sbjct: 171 DGLKYYAGLPGTVAGVEALIARTGYTGEDGFELFVAPGDAVALWEALTAAGAGAGLVPCG 230
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199
LR+ G+ + + + P DA + + + K G ++G+ + +
Sbjct: 231 LSCRDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALEKAAADAA 287
Query: 200 ---IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHA 250
R ++ +P +G P++ D IG + L A+A +D A
Sbjct: 288 EQPPRTLVGLVAEGRRVPRAGYPVVMDGQVIGEVTSGAPSPTLGKPVAMAYVDAAHAA 345
>gi|94312411|ref|YP_585621.1| glycine cleavage system aminomethyltransferase T [Cupriavidus
metallidurans CH34]
gi|229807553|sp|Q1LHM4|GCST_RALME RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|93356263|gb|ABF10352.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Cupriavidus
metallidurans CH34]
Length = 375
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A FL+ ++ ++ L A S +L +G ++ ++ ED F
Sbjct: 51 SHMCVVDLSGIHARAFLRGLLANNIDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110
Query: 66 ILEIDRSKR 74
L ++ S
Sbjct: 111 RLVVNASTA 119
>gi|156932641|ref|YP_001436557.1| glycine cleavage system aminomethyltransferase T [Cronobacter
sakazakii ATCC BAA-894]
gi|166221548|sp|A7MR82|GCST_ENTS8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|156530895|gb|ABU75721.1| hypothetical protein ESA_00424 [Cronobacter sakazakii ATCC BAA-894]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFMTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + V + ++ ++ ++
Sbjct: 110 RLVVNSATREKDLAWINEHAEPYGVSVTVRDDLSLIAVQGPNAKAKAATL 159
>gi|104784214|ref|YP_610712.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
entomophila L48]
gi|95113201|emb|CAK17929.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudomonas entomophila L48]
Length = 360
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 13/174 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G +A P+LQ ++ DV L A S +L +G ++ + + E +
Sbjct: 50 SHMTVIDIEGCAATPWLQHLLANDVTRLESPGKALYSPLLNHEGGVIDDLIAYRTEA-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L + + RD +++ L + + V +P ++ + ++ + S
Sbjct: 109 RLVANAATRDKVLNWL--HAQSAGFKVSFTARPELAILAIQGPQAREKVAALV----SAP 162
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG 177
L R E A + R + D LP P DL+
Sbjct: 163 RAALIRELRPFEGFAE--GDWFIARTGYTGEDGLEIILPGEQAPAFFN-DLVGA 213
>gi|22127170|ref|NP_670593.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
KIM 10]
gi|45443338|ref|NP_994877.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
biovar Microtus str. 91001]
gi|108806357|ref|YP_650273.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
Antiqua]
gi|108813266|ref|YP_649033.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
Nepal516]
gi|145597914|ref|YP_001161990.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
Pestoides F]
gi|150260082|ref|ZP_01916810.1| aminomethyltransferase [Yersinia pestis CA88-4125]
gi|162421265|ref|YP_001608139.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
Angola]
gi|165924972|ref|ZP_02220804.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937207|ref|ZP_02225771.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010334|ref|ZP_02231232.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212706|ref|ZP_02238741.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399824|ref|ZP_02305342.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419345|ref|ZP_02311098.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425299|ref|ZP_02317052.1| glycine cleavage system T protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467675|ref|ZP_02332379.1| glycine cleavage system T protein [Yersinia pestis FV-1]
gi|186896613|ref|YP_001873725.1| glycine cleavage system aminomethyltransferase T [Yersinia
pseudotuberculosis PB1/+]
gi|218928080|ref|YP_002345955.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
CO92]
gi|229837595|ref|ZP_04457757.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
Pestoides A]
gi|229840819|ref|ZP_04460978.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842622|ref|ZP_04462777.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903723|ref|ZP_04518836.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
Nepal516]
gi|294502927|ref|YP_003566989.1| aminomethyltransferase [Yersinia pestis Z176003]
gi|24636861|sp|Q8ZHI6|GCST_YERPE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122383780|sp|Q1CB44|GCST_YERPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|122384267|sp|Q1CEZ7|GCST_YERPN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221579|sp|A4TIA5|GCST_YERPP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238687304|sp|A9R4K6|GCST_YERPG RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238691349|sp|B2K0Q5|GCST_YERPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|21960233|gb|AAM86844.1|AE013930_5 aminomethyltransferase of glycine cleavage system [Yersinia pestis
KIM 10]
gi|45438207|gb|AAS63754.1| aminomethyltransferase [Yersinia pestis biovar Microtus str. 91001]
gi|108776914|gb|ABG19433.1| aminomethyltransferase [Yersinia pestis Nepal516]
gi|108778270|gb|ABG12328.1| aminomethyltransferase [Yersinia pestis Antiqua]
gi|115346691|emb|CAL19574.1| aminomethyltransferase [Yersinia pestis CO92]
gi|145209610|gb|ABP39017.1| aminomethyltransferase [Yersinia pestis Pestoides F]
gi|149289490|gb|EDM39567.1| aminomethyltransferase [Yersinia pestis CA88-4125]
gi|162354080|gb|ABX88028.1| glycine cleavage system T protein [Yersinia pestis Angola]
gi|165914681|gb|EDR33294.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923172|gb|EDR40323.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990820|gb|EDR43121.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205998|gb|EDR50478.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166963339|gb|EDR59360.1| glycine cleavage system T protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050532|gb|EDR61940.1| glycine cleavage system T protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055699|gb|EDR65483.1| glycine cleavage system T protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186699639|gb|ACC90268.1| glycine cleavage system T protein [Yersinia pseudotuberculosis
PB1/+]
gi|229679493|gb|EEO75596.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
Nepal516]
gi|229690932|gb|EEO82986.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697185|gb|EEO87232.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704283|gb|EEO91294.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Yersinia pestis
Pestoides A]
gi|262360962|gb|ACY57683.1| aminomethyltransferase [Yersinia pestis D106004]
gi|262364902|gb|ACY61459.1| aminomethyltransferase [Yersinia pestis D182038]
gi|294353386|gb|ADE63727.1| aminomethyltransferase [Yersinia pestis Z176003]
gi|320014014|gb|ADV97585.1| glycine cleavage system aminomethyltransferase T [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ ++ +
Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152
>gi|302385924|ref|YP_003821746.1| glycine cleavage system T protein [Clostridium saccharolyticum WM1]
gi|302196552|gb|ADL04123.1| glycine cleavage system T protein [Clostridium saccharolyticum WM1]
Length = 360
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 95/308 (30%), Gaps = 54/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G A+ LQ ++T D + AR S + G + ++ K + + +
Sbjct: 51 SHMGEIICKGTDALENLQRMLTNDFTGMADGQARYSPMCNEMGGTVDDLIVYKKKAEEYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
+ ++ S ++ +L +K V+ E + ++ +
Sbjct: 111 IVVNASNKEKDYRWMLDHK-FGEVVFEDISDDITQIALQGPKSQEILRKLTGDIPEKYYY 169
Query: 110 ------FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146
+ I R + N E + K Y
Sbjct: 170 GNFNGRVAQIPCIVSRTGYTGEDGFELYLDNTYAETMWETLMEAGKEYGLIPCGLGARDT 229
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ + I P + + + + K +IG+ + +++RKR +
Sbjct: 230 LRLEAGMPLYGHEM-NDEINPVETGLGF--AVKMKKEDFIGKSHLP--DKDSLLRKRVGL 284
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVH 260
+ +L + + G A+AI + K + + V
Sbjct: 285 KVTGRGIIREQEEVLVNGKKAGFTTSGTHCPYLGYPAAMAILDKEYAIEGTK--VTVIVR 342
Query: 261 GVRVKASF 268
G V+A
Sbjct: 343 GRDVEAEV 350
>gi|300789372|ref|YP_003769663.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32]
gi|299798886|gb|ADJ49261.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32]
Length = 808
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 87/265 (32%), Gaps = 48/265 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
+++ G ++ FLQ++ T + + +L G + ++++E + F
Sbjct: 498 VEISGPGSLAFLQSLTTNQLDK-SVGSVTYTLMLDSAGGVRSDVTVARLEPEVFQVGING 556
Query: 67 -LEID-----------------------------RSKRDSL----IDK--LLFYKLRSNV 90
+++D R L L +++ R
Sbjct: 557 NIDVDHFVKHAPSGVRVRDITGGTCCVGVWGPLARDLVQPLSHEDFSHQGLKYFRAR-KA 615
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I P+ + LS+ E + + D + D L +A+ ++ LR+
Sbjct: 616 RIAGVPVVAMRLSYVGELGWEIYTSADNGLRLWDAL-WAAGQPLGVVAAGRAAFNSLRLE 674
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMIITG 209
G TD P++A + + KG ++G++ + R + R R + I
Sbjct: 675 KGYRLWGTDMTTEHD-PYEAGLAF--AVRPAKGDFLGRDAIEGRSEETASRRLRCLTIDD 731
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234
+ P+ + G +
Sbjct: 732 GRTVVLGKEPVFAGGVASGYVTSAA 756
>gi|195117468|ref|XP_002003269.1| GI23443 [Drosophila mojavensis]
gi|193913844|gb|EDW12711.1| GI23443 [Drosophila mojavensis]
Length = 410
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 55/273 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A L+++ TAD+L +P + QG IL +++K+ E + + +
Sbjct: 87 VRGKDAAACLESVCTADILEMPGGSGSLTVFTNEQGGILDDLIVNKVSEQELYVVSNAAM 146
Query: 73 -----------------------------------------KRDSLIDKL-------LFY 84
L L Y
Sbjct: 147 KQQDQEIMSSAVSRFKSQGKDVSIEFLSPADQSLIAVQGPQVAQQLAKLLPQPKALEQLY 206
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
+RS V E+ I V ++ +T + I + + + L E + +
Sbjct: 207 FMRSGV-FELAGIRNVRIT-RCGYTGEDGVEISVQSAQVEALTEALLAAGELRLAGLGAR 264
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR+ G+ D + I P +A + L + G + + + + R+R
Sbjct: 265 DSLRLEAGLCLYGNDI-DAQITPVEAALAWLVAKRRRTTADFPGAQPILQQLKEGVQRRR 323
Query: 204 PMIITGTDDLPP--SGSPILTDDIEIGTLGVVV 234
+ +PP +G I + ++G +
Sbjct: 324 IGLQMLGAKVPPARAGVAIFSGGQQVGRVTSGC 356
>gi|270487506|ref|ZP_06204580.1| aminomethyltransferase [Yersinia pestis KIM D27]
gi|270336010|gb|EFA46787.1| aminomethyltransferase [Yersinia pestis KIM D27]
Length = 310
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ ++ +
Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152
>gi|149201966|ref|ZP_01878940.1| aminomethyltransferase [Roseovarius sp. TM1035]
gi|149145014|gb|EDM33043.1| aminomethyltransferase [Roseovarius sp. TM1035]
Length = 390
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 80/279 (28%), Gaps = 54/279 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69
++ G A L ++T DV +P + +G ++ + + + + L
Sbjct: 67 RITGPDAARVLNRLVTRDVTKIPLHRVGYAIWCDEEGMVIDDGTLFHLGAEDWRLCCQEP 126
Query: 70 ------------DRSKRDSLID----KL---LFYKLRSNVIIEI-----QPINGVVLSWN 105
D D L Y + +++ + GV
Sbjct: 127 MLRWLLDAAWGFDVDILDESRKIAGLALQGPTAYAVLRAAGLDLGHLRPFDLAGVEPGLM 186
Query: 106 QEHTFSNSSFIDERFSIADVLLH---RTWGHNEKIASDIKTYHE---LRINHGIVDPNTD 159
T E ++ L R W E + Y RI G + D
Sbjct: 187 ISRTGFTGDLGYELWTAWGDALPLWDRLWQAGEDLGLRAIGYEAVNIARIEAGFMVAGVD 246
Query: 160 FLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
F P+ P + + + + LTKG + G+ R R M +
Sbjct: 247 FQPAHATERLHRGHTPIELGLGPM--VDLTKGHFNGR----RALLAAKPRSLLMRLDVEG 300
Query: 212 DLPPSGSPILTDD-IEIGTLGVVV------GKKALAIAR 243
P G+ + E+G + V ALA R
Sbjct: 301 FKPAQGALVYHAKRREVGHVTSGVWSPTAKRNIALAHVR 339
>gi|311747757|ref|ZP_07721542.1| glycine cleavage system T protein [Algoriphagus sp. PR1]
gi|126575746|gb|EAZ80056.1| glycine cleavage system T protein [Algoriphagus sp. PR1]
Length = 364
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 92/310 (29%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ +Q + + D L A+ S G I+ ++ K ++ ++
Sbjct: 53 SHMGEFMVEGPEALNLIQKVTSNDASKLVEGQAQYSCFPNETGGIVDDLIVYKFSDEKYM 112
Query: 67 LEIDRSKRDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEH 108
L ++ S + + + Y L + I +Q + V LS + +
Sbjct: 113 LVVNASNIEKDWNWVNKYNTMGAQLTNISDDISLFAVQGPKAIEAVQALTPVNLSEVKFY 172
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---Y--------------------H 145
F+ F + I + G E + +
Sbjct: 173 HFTLGEFAGVKDVIISGTGYTGAGGFEIYVKNEDAEQVWKAIFEAGKDFDIKPIGLGARD 232
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK + E + + I R+
Sbjct: 233 TLRMEMGYCLYGNDI-DDTTSPLEAGLGWI--TKFTKD-FTNSEALLAQKEAGITRRLVG 288
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALT 258
I +P I+ + EIG + L + + + + +
Sbjct: 289 FIMQDRGIPRGHYKIVDAEGNEIGEVTSGTQSPSMNVGIGLGYVKKEFAKAGTEIFIQVR 348
Query: 259 VHGVRVKASF 268
++
Sbjct: 349 NKNLKAIVEK 358
>gi|37927479|pdb|1PJ5|A Chain A, Crystal Structure Of Dimethylglycine Oxidase Of
Arthrobacter Globiformis In Complex With Acetate
gi|37927481|pdb|1PJ6|A Chain A, Crystal Structure Of Dimethylglycine Oxidase Of
Arthrobacter Globiformis In Complex With Folic Acid
gi|37927484|pdb|1PJ7|A Chain A, Structure Of Dimethylglycine Oxidase Of Arthrobacter
Globiformis In Complex With Folinic Acid
gi|13241956|gb|AAK16482.1|AF329477_2 N,N-dimethylglycine oxidase [Arthrobacter globiformis]
Length = 830
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 53/278 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ LQ + TAD+ + +L G + ++++ EDTF L +
Sbjct: 511 LEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSDITVARLSEDTFQLGANG 569
Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100
+ + ++ + ++R S V + +G+
Sbjct: 570 NIDTAYFERAARHQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGL 629
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
+ R S L + + IA+
Sbjct: 630 KYFRAKNVVIGGIPVTAMRLSYVGELGWELYTSADNGQRLWDALWQAGQPFGVIAAGRAA 689
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202
+ LR+ G TD P +A + + + K +IG+ + R + + R
Sbjct: 690 FSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKESFIGKGALEGRTEEASARRL 746
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
R + I + P+ + +G + +A
Sbjct: 747 RCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVA 784
>gi|51597492|ref|YP_071683.1| glycine cleavage system aminomethyltransferase T [Yersinia
pseudotuberculosis IP 32953]
gi|153950642|ref|YP_001399847.1| glycine cleavage system aminomethyltransferase T [Yersinia
pseudotuberculosis IP 31758]
gi|59797702|sp|Q666R5|GCST_YERPS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166989732|sp|A7FF19|GCST_YERP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|51590774|emb|CAH22420.1| Glycine cleavage system T-protein [Yersinia pseudotuberculosis IP
32953]
gi|152962137|gb|ABS49598.1| glycine cleavage system T protein [Yersinia pseudotuberculosis IP
31758]
Length = 365
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + RD + + + V + ++ ++ +
Sbjct: 110 RLVVNSATRDKDLAWISQHAEPYQVEVTVRDDLALIAVQGPQA 152
>gi|260171346|ref|ZP_05757758.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
D2]
gi|315919657|ref|ZP_07915897.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693532|gb|EFS30367.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 361
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ I + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEDGGIVDDLLVYRYEPEKYMLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 ME 117
>gi|124516327|gb|EAY57835.1| Glycine cleavage system T protein [Leptospirillum rubarum]
Length = 374
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 95/314 (30%), Gaps = 64/314 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ + +IT+++ +P A +L P G ++ + +
Sbjct: 48 SHMGHFVLRGKDALGAVNRLITSNLENVPPGKALYGHLLNPAGGVIDDIMAYHFGRERVD 107
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------------------- 107
L ++ S RD + + L + + +E V ++
Sbjct: 108 LVVNASNRDGDARWIREH-LPAGIELEDFSPGHVGMAVQGPRASRVLEDVLPGILDMRRR 166
Query: 108 -----HTFSNSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY 144
F+ R +G +
Sbjct: 167 ETRLLQIEGGEGFLVSRTGYTGEDGWEFFGPAGPGVSFYEKLLHAGKKAGILACCGLGAR 226
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G + P DA + +S TK +IG+ S ++ R P
Sbjct: 227 DLLRLEMGYPLYGQEL-NDRFSPFDAGLAF--AVSRTKSEFIGR--TSILESDGQPRTNP 281
Query: 205 -------MIITGTDDLPPSGSPI-LTDDIEIGTLGV------VVGKKALAIARIDKVDHA 250
++ G +P +G P+ TD +G + V LA D ++
Sbjct: 282 GHPSLGGFVVEGRG-IPRTGCPMEKTDGTRVGEVTSGGFSPRVGSGFGLAYLDRDFLEFF 340
Query: 251 IKKGM-ALTVHGVR 263
G + +HG+
Sbjct: 341 RNGGPGQVRIHGIA 354
>gi|30248621|ref|NP_840691.1| glycine cleavage system aminomethyltransferase T [Nitrosomonas
europaea ATCC 19718]
gi|34921593|sp|Q82WQ6|GCST_NITEU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|30180216|emb|CAD84518.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
Length = 363
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G++ FL+ ++ +V L A + +LTP G I+ +I + E F L ++
Sbjct: 55 VDIHGENVRQFLRGLVANNVDKLTLPGKALYTCMLTPTGGIIDDLIIYFLSESWFRLVVN 114
Query: 71 RSKRDSLIDKLL 82
D ID +
Sbjct: 115 AGTADKDIDWIT 126
>gi|329955526|ref|ZP_08296434.1| aminomethyltransferase [Bacteroides clarus YIT 12056]
gi|328525929|gb|EGF52953.1| aminomethyltransferase [Bacteroides clarus YIT 12056]
Length = 363
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G A+ FLQ + + +V L + + G I+ L+ + E++ ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEQEKYLLVVNASN 115
Query: 73 ----------------KRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ D++ ++ + +Q + V LS +TF++ F
Sbjct: 116 IEKDWNWCVSHNTEGAELENASDRMAQLAVQGPKAVEALQKLTPVNLSELPYYTFTHGEF 175
Query: 116 IDERFSIADVLLHRTWGHNEK---IASDIKTYHE--------------------LRINHG 152
E I + G E + +K ++ LR+ G
Sbjct: 176 AGEPDVIISNTGYTGAGGFELYFYPEAAMKIWNAVFEAGAEFSIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + + K + + ++ + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFAEGKN-FTNRPMLEKQKAEGTARKLVGFEMVDRG 293
Query: 213 LPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G + + + IG + + + + + + + ++
Sbjct: 294 IPRHGYELQSPEGAPIGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVRPP 358
>gi|315443872|ref|YP_004076751.1| aminomethyltransferase [Mycobacterium sp. Spyr1]
gi|315262175|gb|ADT98916.1| aminomethyltransferase [Mycobacterium sp. Spyr1]
Length = 365
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 93/308 (30%), Gaps = 46/308 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + T D+ + A+ + T G ++ + + +D
Sbjct: 53 SHLGKALVTGPGAAEFVNSAFTNDLRRIGPGKAQYTLCCTEDGGVIDDLIAYYVSDDEIF 112
Query: 67 LE----IDRSKRDSLIDKL-----LFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + +L D+ + + RS ++ +Q VV F
Sbjct: 113 LVPNAANTAAVVAALQDRAPDGITITDEHRSRAVLAVQGPRSADVVGGLGLPTDMDYMGF 172
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------RINHGIVDP---NTDFL 161
D + + RT E + + + R G
Sbjct: 173 ADGEVGGVETRVCRTGYTGEHGYELLPAWDQAEVVFDALVESVRAAGGEPAGLGARDTLR 232
Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+P H+ +D+ I K + G++ + + R+ +
Sbjct: 233 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFWGRDALLAEKEAG-PRRTLRGLRAVG 291
Query: 212 -DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GV 262
+ + +LTDD +G K +A+A ID I G +TV V
Sbjct: 292 RGVLRADLSVLTDDTPVGFTTSGTFSPTLKVGIALALIDTAAG-IADGDHVTVDVRGRRV 350
Query: 263 RVKASFPH 270
+ P
Sbjct: 351 ECEVVKPP 358
>gi|304396726|ref|ZP_07378606.1| glycine cleavage system T protein [Pantoea sp. aB]
gi|304355522|gb|EFM19889.1| glycine cleavage system T protein [Pantoea sp. aB]
Length = 365
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F
Sbjct: 50 SHMTIVDLTGPRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMSESFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119
L ++ + R++ + + + + + E + + + Q + + F +E+
Sbjct: 110 RLVVNSATRENDLAWITQHAQGYGITLMERDDLALIAVQGPQAQQKAQTLFSEEQRQAVA 169
Query: 120 --------------FSIADVLLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + LR+
Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPAGEAADFWQRLLAAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + P A M + +IG+E + + R +
Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMSWTVCWEPSDRDFIGREALELQRERGTEKLVGLILTE 288
Query: 202 ----KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + TDD I+T TLG +A+AR+ + +
Sbjct: 289 KGVLRNGQPVRFTDDQGQPQEGIITSGSFSPTLGCS-----IALARV-PASVGSTAIVEI 342
Query: 258 TVHGVRVKASFP 269
+ V+ + P
Sbjct: 343 RNRQMPVQVTRP 354
>gi|124809754|ref|XP_001348671.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7]
gi|23497569|gb|AAN37110.1| aminomethyltransferase, putative [Plasmodium falciparum 3D7]
Length = 524
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 44/128 (34%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLT------------LPYK------------- 37
L N++ I++ GK + FLQ++ T D+ LP
Sbjct: 6 LCKLKNRALIQLWGKDSFKFLQSLTTNDLNKIIPESDFILHKNLPENILCNNYDSYIYDI 65
Query: 38 -----------IARGSAILTPQGKILLYFLISKI----EED----TFILEIDRSKRDSLI 78
+ S L GKIL I I E++ F ++ + + L+
Sbjct: 66 NNKTTNYEKSAVGLPSLFLLNNGKILYDCFIYNIKYSYEKNLFFSLFYIDCNIHILNFLL 125
Query: 79 DKLLFYKL 86
D L KL
Sbjct: 126 DLLEKRKL 133
Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
F + P D D LN ++ KGCY+GQE ++R ++ I K + +
Sbjct: 337 FTFKNLTPFDLNYDNLNYLTKEKGCYVGQEAINRTRNEIFISKYSLTL 384
>gi|149912870|ref|ZP_01901404.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
gi|149813276|gb|EDM73102.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
Length = 417
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 97/304 (31%), Gaps = 54/304 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F+Q + D+ + + I +G IL ++ +++E+ F L +
Sbjct: 94 VEITGPDAAKFVQMLTPRDLSNMAVGQCKYVLITNAEGGILNDPILLRLDENHFWLSLAD 153
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------GVVLSWNQE 107
S ++ + S + + I + + W +E
Sbjct: 154 S---DILLWAQGVAVHSGLDVSICEPDVSPLQLQGPKSGEIMRALFGDEIMDLRYYWLRE 210
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151
I R + L + + + + T RI
Sbjct: 211 MDLDGIPLIVSRTGWSSELGYEIYLRDGTKGDALWERIMAAGMPFGLKPGHTSSIRRIEG 270
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ + D T P + +D L + + +IG+ + RI+ + RK+ ++
Sbjct: 271 GMLSYHADADIHT-NPFELGLDRLVNLDMEAD-FIGKFALQRIRDNGVTRKQIGLVIDGP 328
Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262
L + PI D +G + + ALA+ +D + + +
Sbjct: 329 KLTGPNTTFWPINHDGACVGRVTSAIYSPRLGKNIALAMVSVDCAELGTELEVVTHSGET 388
Query: 263 RVKA 266
Sbjct: 389 TATV 392
>gi|222081899|ref|YP_002541264.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
gi|221726578|gb|ACM29667.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
Length = 789
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 93/298 (31%), Gaps = 62/298 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516
Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96
F + + ++ L K R II P
Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139
+ + + F + + R L + + H + +
Sbjct: 575 QPTIGELEWFRFAVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDAVWKAGEP 634
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +RI G++ + +F T P +A + + + +IG+E + R
Sbjct: 635 YGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693
Query: 194 IQHRNIIRKRPMII--TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
R + MI ++ G I ++G + + +A+ARID
Sbjct: 694 ---RKENPRHLMIGLDVQANETVGHGDCIHIGRAQVGVITSATRSPILGQTIALARID 748
>gi|145223526|ref|YP_001134204.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
gilvum PYR-GCK]
gi|145216012|gb|ABP45416.1| aminomethyltransferase [Mycobacterium gilvum PYR-GCK]
Length = 369
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 93/308 (30%), Gaps = 46/308 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + T D+ + A+ + T G ++ + + +D
Sbjct: 57 SHLGKALVTGPGAAEFVNSAFTNDLRRIGPGKAQYTLCCTEDGGVIDDLIAYYVSDDEIF 116
Query: 67 LE----IDRSKRDSLIDKL-----LFYKLRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + +L D+ + + RS ++ +Q VV F
Sbjct: 117 LVPNAANTAAVVAALQDRAPDGITITDEHRSRAVLAVQGPRSADVVGGLGLPTDMDYMGF 176
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHEL-----------RINHGIVDP---NTDFL 161
D + + RT E + + + R G
Sbjct: 177 ADGEVGGVETRVCRTGYTGEHGYELLPAWDQAEVVFDALVESVRAAGGEPAGLGARDTLR 236
Query: 162 PSTIFP---HDALMDLLN-------GISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+P H+ +D+ I K + G++ + + R+ +
Sbjct: 237 TEMGYPLHGHELSLDISPLQARCGWAIGWKKDAFWGRDALLAEKEAG-PRRTLRGLRAVG 295
Query: 212 -DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH----GV 262
+ + +LTDD +G K +A+A ID I G +TV V
Sbjct: 296 RGVLRADLSVLTDDTPVGFTTSGTFSPTLKVGIALALIDTAAG-IADGDHVTVDVRGRRV 354
Query: 263 RVKASFPH 270
+ P
Sbjct: 355 ECEVVKPP 362
>gi|324503440|gb|ADY41498.1| Pyruvate dehydrogenase phosphatase regulatory subunit [Ascaris
suum]
Length = 867
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 90/289 (31%), Gaps = 56/289 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +S+ + +V G A+ +Q + +ADV P + + G + +S++
Sbjct: 524 LIDMSSFAKFEVTGPDAVKHMQRLCSADVDK-PVGTTIYTGMQNEAGGYVTDCTVSRVGP 582
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-------------QEHT 109
+ + ++ + L+ + Q + G+ + +
Sbjct: 583 QHYFVVAPTVQQLRFQHWFYRWALKWQHNVTSQDVTGLYTAVDVVGPASRYLMQDLTGRP 642
Query: 110 FSNSSFIDERF----------------SIADVLLHRTWGHNEKIASDIK----------- 142
S+S+F RF S L + NE + +
Sbjct: 643 ISSSNFPSFRFKELSIGIATGIRAISVSHCGELGWVLYIPNEVAQNVYELIVDAGHEYGL 702
Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+LRI V D +T+ P++ +S K ++G+E + +
Sbjct: 703 MHAGYYALRQLRIEKFYVYWQQDI-NATVTPNECGRSFR--VSFEKD-FLGKEALVKQNE 758
Query: 197 RNIIRKRPMIIT-----GTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
I ++ ++ TD P G I + +G L
Sbjct: 759 TGISKRFVQLLVDRHDMETDPWPQGGEVIYRNGRPVGRTTSAAYGFTLG 807
>gi|227355072|ref|ZP_03839483.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
gi|227164859|gb|EEI49706.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
Length = 382
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ +K+ G+ A L +I+AD+ ++ + + +L +GKI+ + E
Sbjct: 43 TDFSHYGMVKISGEDAWRLLNYLISADISSIRDEQLLYTLLLDKEGKIISDAYVLCDNEH 102
Query: 64 TFIL 67
F++
Sbjct: 103 YFLI 106
>gi|116672244|ref|YP_833177.1| sarcosine oxidase subunit alpha family protein [Arthrobacter sp.
FB24]
gi|116612353|gb|ABK05077.1| sarcosine oxidase, alpha subunit family [Arthrobacter sp. FB24]
Length = 984
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 87/281 (30%), Gaps = 62/281 (22%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I++ GK A FL I T L AR + G I + ++
Sbjct: 640 MDATTL---GKIEIRGKDAGEFLNRIYTNAFKKLAPGSARYGVMCMADGMIFDDGVTLRL 696
Query: 61 EEDTFILEIDRSKRDSLIDKL------------------------------LFYKLRSNV 90
+ED F + ++D L + + V
Sbjct: 697 DEDRFFMTTTTGGAAKVLDWLEEWLQTEWPELDVHCTSVTEQWSTIAVVGPKSRAVLAKV 756
Query: 91 IIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134
E+ G+ ++ + S R S + L + TW
Sbjct: 757 APELAAGGGLEAEAFPFMTFRETTLASGVQARICRISFSGELAYEINVPSWYGLNTWEAV 816
Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
++ +T H LR G D T+ P DA M+ + +S K +IG
Sbjct: 817 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWV--VSKAKE-FIG 872
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226
+ +R + RK + + D P G+ ++ I
Sbjct: 873 KRSYARADAKREDRKHLVSVLPVDGTLRLPEGTQLVEKGIP 913
>gi|320449768|ref|YP_004201864.1| glycine cleavage system T protein [Thermus scotoductus SA-01]
gi|320149937|gb|ADW21315.1| glycine cleavage system T protein [Thermus scotoductus SA-01]
Length = 349
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 83/282 (29%), Gaps = 51/282 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ A+ FLQ D L A+ S + +G ++ + ++ E+ ++
Sbjct: 49 SHMGEFLIRGREALAFLQWATANDAAKLKVGRAQYSMLPNARGGVVDDIYLYRLAEEEYL 108
Query: 67 LEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFS-------------- 111
+ ++ + L + + V + +L+ S
Sbjct: 109 MVVNAANIAKDFAHLKELSRGFA-VELTDLSEETALLALQGPKAASLLQGLTDADLSQRK 167
Query: 112 NSSFIDERFSIADVLLHRT-----------------------WGHNEKIASDIKTYHELR 148
+ R + L RT + + LR
Sbjct: 168 KNDVFSARVAGRPARLARTGYTGEDGFELFLAPKDAEAVFEALLEAGATPAGLGARDTLR 227
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G + P + + K + G+E + ++ + +
Sbjct: 228 LEAGFPLYGHELT-DDTNPLCTPWAWV--VKKEKD-FHGKEAMLAT----PCAEKLIGLV 279
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDK 246
+P G + + D +G + K +A+A ++K
Sbjct: 280 LEAGIPREGYRVYSGDRPVGRVTSGGYSPLLEKGIALAYVEK 321
>gi|197286738|ref|YP_002152610.1| aminomethyltransferase [Proteus mirabilis HI4320]
gi|194684225|emb|CAR45729.1| putative aminomethyltransferase [Proteus mirabilis HI4320]
Length = 382
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ +K+ G+ A L +I+AD+ ++ + + +L GKI+ + E
Sbjct: 43 TDFSHYGMVKISGEDAWRLLNYLISADISSIRDEQLLYTLLLDKAGKIISDAYVLCDNEH 102
Query: 64 TFIL 67
F++
Sbjct: 103 YFLI 106
>gi|269468387|gb|EEZ80052.1| Glycine cleavage T protein, aminomethyltransferase [uncultured
SUP05 cluster bacterium]
Length = 358
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 39/232 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A FLQ +I DV L A S +L +G ++ ++ + ++ +
Sbjct: 49 SHMTVVDFKGLQAKVFLQTLIANDVDKLKTEGKALYSCMLNEKGGVVDDLIVYYLNDEDY 108
Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNVIIEIQP-INGVVL 102
+ I+ + I L + R+ V E P + V
Sbjct: 109 RMVINAGTTEKDIAWINTQAEGFDVSVEPKFDLAMIAVQGPNARAKV-FEAMPGVEDVCG 167
Query: 103 SWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRI 149
+ S S R + + LR+
Sbjct: 168 ELKPFNAASLGSLFIARTGYTGEDGFEIMLPEKSAEFTWKMLLEVGVKPCGLGARDTLRL 227
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
G+ ++ + P +A + +S ++G++ + ++ + + +
Sbjct: 228 EAGMSLYGSEM-NDQVSPLEAALTWTVDLSDEDRHFVGRDALEALRDKGVKK 278
>gi|283788439|ref|YP_003368304.1| aminomethyltransferase (glycine cleavage system protein)
[Citrobacter rodentium ICC168]
gi|282951893|emb|CBG91610.1| aminomethyltransferase (glycine cleavage system protein)
[Citrobacter rodentium ICC168]
Length = 364
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 16/193 (8%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTRTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + + I ++ ++ + + F DE+ +
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIEITVRDDLSLIAVQGPNAQAKAATLFTDEQRQAVE 169
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI--SLTK 182
+ + Y + P++ D + + + K
Sbjct: 170 GMKPFFGVQAGDLFIATTGYT------------GEAGYEIAMPNEKAADFWHALVEAGVK 217
Query: 183 GCYIGQEVVSRIQ 195
C +G R++
Sbjct: 218 PCGLGARDTLRLE 230
>gi|34498886|ref|NP_903101.1| glycine cleavage system aminomethyltransferase T [Chromobacterium
violaceum ATCC 12472]
gi|59797838|sp|Q7NSJ3|GCST_CHRVO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|34104737|gb|AAQ61094.1| glycine cleavage system T protein [Chromobacterium violaceum ATCC
12472]
Length = 362
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS 58
S+ + I + G A +LQ +I DV L A S +LTP+G ++ ++
Sbjct: 52 SHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLTPEGTVVDDLIVY 104
>gi|320160891|ref|YP_004174115.1| serine hydroxymethyltransferase / aminomethyltransferase
[Anaerolinea thermophila UNI-1]
gi|319994744|dbj|BAJ63515.1| serine hydroxymethyltransferase / aminomethyltransferase
[Anaerolinea thermophila UNI-1]
Length = 1054
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 31/66 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A FL ++ D+ L + + L P+ ++ L+ + E+ ++
Sbjct: 695 SHMGVYQVEGPQACAFLDSVCGNDIAALEVGESCYTHFLDPEANVIDDTLVYRRGEEKYL 754
Query: 67 LEIDRS 72
+ ++ S
Sbjct: 755 VVVNAS 760
>gi|161612168|gb|AAI55631.1| Dmgdh protein [Danio rerio]
Length = 875
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 95/278 (34%), Gaps = 52/278 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +KV G + L ++ + + S +LTP+G++ ++ +
Sbjct: 543 IDLSPFGKMKVTGADSERLLDRLLANTLPKV--GQTNISHMLTPRGRVYAELTVTHTQPG 600
Query: 64 TFILE------------IDRSKRD--------SLIDKLLFY-----KLRS---NVIIEIQ 95
F+L I+R D ++ D++ K R+ +
Sbjct: 601 EFLLITGSGSELHDLRWIEREAADGGYDVCVTNVTDEIGVLGIAGPKARTILQKLTSADL 660
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---------------GHNEKIASD 140
+G + + ++ R S L + ++ D
Sbjct: 661 SESGFRFLQCRTIELAGATVQAIRISYTGELGWELYMDMRNMSAVYQALMEAGRDENIDD 720
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ G + T P +A +D I L K +IG++ + I+ +
Sbjct: 721 FGTYAMNSLRLEKGFRAWGAEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQALLEIKAQ 777
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234
+ R+ + TDD+ P G+ + + +G
Sbjct: 778 GLSRRLAFLTLNTDDIDPEGNESVWHNGEVVGNTTSGS 815
>gi|18977713|ref|NP_579070.1| glycine cleavage system aminomethyltransferase T [Pyrococcus
furiosus DSM 3638]
gi|24636855|sp|Q8U185|GCST_PYRFU RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|18893448|gb|AAL81465.1| aminomethyltransferase [Pyrococcus furiosus DSM 3638]
Length = 398
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ FLQ T D+ P + +L +G I L+ + + ++
Sbjct: 50 SHMGEILFKGKDALKFLQYTTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYL 109
Query: 67 LEIDRSKRDSL---IDKLLF-YKLRSNVIIEIQ 95
+ D + L L + + + +EI+
Sbjct: 110 MICDADAFEKLYAWFTYLKKTIEQFTKLDLEIE 142
>gi|37527466|ref|NP_930810.1| glycine cleavage system aminomethyltransferase T [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|59797833|sp|Q7N197|GCST_PHOLL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|36786901|emb|CAE15971.1| aminomethyltransferase (glycine cleavage system T protein)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 364
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 101/310 (32%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ D+ L A + +L G ++ ++ + D +
Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYLSNDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ + R+ + + + V I+++ ++ + S +++
Sbjct: 110 RLVVNSATREKDLAWINEHVANYPVDIQVRDDLALIAVQGPDAQAKVESLLNDEQKQTIA 169
Query: 120 -------FSIADVLLHRTWGHNEK---------IASDIK--------------TYHELRI 149
D+ + T E A+D LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEVALPKEQAADFWQKLLSVGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + TI P A M +IG+E + + + ++ + +
Sbjct: 230 EAGMNLYGQEM-DETISPLVANMGWTIAWKPEDRQFIGREALEKQREEGT--EQLVGLVM 286
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALTVH 260
+ G ++ E+GTL V +A+AR+ + + +
Sbjct: 287 REKGVLRGGLAVSFTDEMGTLHSGVITSGTFSPTLGFSIALARV-PQGIGEQAVVQIRNR 345
Query: 261 GVRVKASFPH 270
+ V+ P
Sbjct: 346 EMPVQVVKPS 355
>gi|313202136|ref|YP_004040794.1| glycine cleavage t protein (aminomethyl transferase) [Methylovorus
sp. MP688]
gi|312441452|gb|ADQ85558.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. MP688]
Length = 371
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 89/294 (30%), Gaps = 49/294 (16%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+KV G A + ++ D+ L + +A + G + ++ + F L
Sbjct: 57 IVKVSGPDAEAVIDQLVARDITKLEPGCSLLAAEVDETGALCDDIMVIRDSATDFRLSHG 116
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------------------PINGVVLSWNQE 107
K + L K NV +E + G+ +
Sbjct: 117 SGKTPEQLKLLSAGK---NVKVEPDLDVHILSLQGPLSLDILAPHLSFDLAGLPYFRHVP 173
Query: 108 HTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRIN 150
+ + R + + + I + + RI
Sbjct: 174 TVLFGKNIVIARGGYSGERGYEVYCTAADAVFLWDKILEVGAPFGAIPASWNSLELTRIE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISL-TKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
++ + P + M G+ L KG YIG+ V +++ R +R +I
Sbjct: 234 AALLFFPFEMPEGDTTPWEVNMGW--GVDLDKKGDYIGKAAVLKLKGRERVRH-VGLICR 290
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKK-GMALTVHG 261
+ +G+ + D EIG + + L + + V + G L VH
Sbjct: 291 SASAMEAGAKLFKDGKEIGVITSASYSRYLMLSLAMAHVKPELSAIGTTLEVHN 344
>gi|224113699|ref|XP_002316546.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex
[Populus trichocarpa]
gi|222859611|gb|EEE97158.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex
[Populus trichocarpa]
Length = 408
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 86/269 (31%), Gaps = 54/269 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK +PFL+ ++ ADV L + +G + +I+K+ +D + ++
Sbjct: 91 SLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNAG 150
Query: 73 ---------------------------------------KRDSLIDKLLFYKLRSNV--- 90
++ L L S V
Sbjct: 151 CRDKDLAHIEAHMKSFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDL-SKVYFG 209
Query: 91 IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
I ING + E F S + +A +L ++ G +
Sbjct: 210 EFRITDINGARCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTG--LGARD 267
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D I P +A ++ G +G ++G EV+ + + R
Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLNWAIGKRRKAEGGFLGAEVILKQLAEG-PKVRL 325
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ + T P S S I + IG +
Sbjct: 326 VGFSSTGPPPRSHSEIQDEKGTNIGEITS 354
>gi|149202245|ref|ZP_01879218.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
TM1035]
gi|149144343|gb|EDM32374.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
TM1035]
Length = 1003
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 51/266 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +L R + G ++ ++++I+EDTF+
Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTNVMSSLKPGKCRYGLMCNENGFLMDDGVVARIDEDTFL 729
Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLR---SNVIIEIQP 96
+S+ + Y K R + + +
Sbjct: 730 CHTTTGGAESIHGHMEDWLQCEWWDWKVYTANVTEQYAQIAVVGPKGRETLAKLTTDDLS 789
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD--IKTY 144
+ + + T + R S + L W + ++ + TY
Sbjct: 790 NDALPFMGWADLTLAGMPVRAYRISFSGELSYELAVPASHGRALWDALLEAGAEHSVTTY 849
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
H +R G + + T+ P D M IS K Y+G+ R +
Sbjct: 850 GTEGLHVMRAEKGFIMIGDE-TDGTVIPQDLGMGW--AISKKKDDYLGKRAQERSHMADP 906
Query: 200 IRKRPMII-TGTDDLPPSGSPILTDD 224
R + + + T + P G+
Sbjct: 907 NRWKLVGLETLDGSVLPDGAYATAPG 932
>gi|307544258|ref|YP_003896737.1| dimethyl sulfoniopropionate demethylase [Halomonas elongata DSM
2581]
gi|307216282|emb|CBV41552.1| putative dimethyl sulfoniopropionate demethylase [Halomonas
elongata DSM 2581]
Length = 475
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 44/224 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
I+V G A F + T DV +P + R + G++L ++ ++ ED F I D
Sbjct: 135 IRVKGPEAEAFCNYVCTRDVTRVPSMMGRYVVLCDEHGRVLNDPVMLRVAEDEFWFTISD 194
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------SNSSFIDE 118
+ + + +R +V I+ ++ + + + +
Sbjct: 195 SDLAYWF--RGVNHGMRFDVEIDEIDVSPLQVQGPKSEDLLADLVGEAVREVPYYGLMAA 252
Query: 119 RFSIADVLLHRTWGHNEK---------IASDIKTYHEL------------------RINH 151
R DV + +T EK + ++ + RI
Sbjct: 253 RIEGVDVFISQTGFSGEKGYEVYAHDSTLNAETVWNAILDVGEQYNLMVIAPAHHRRIAA 312
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
GI+ D P + + + YIG+E + R +
Sbjct: 313 GILSYGQDL-DHETNPFQCNLGHM-VPKAKEADYIGKEALERTR 354
>gi|227112611|ref|ZP_03826267.1| glycine cleavage system aminomethyltransferase T [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 371
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDHF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + V I + +V +
Sbjct: 110 RLVVNSATREKDLAWIGQHAAPFGVEIRERDDLALVAVQGPQA 152
>gi|126741331|ref|ZP_01757008.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
gi|126717587|gb|EBA14312.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
Length = 816
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 94/314 (29%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I+V G A FL I A++ ++P + L +G I ++++ E +
Sbjct: 491 MSSFGKIRVEGPDAEAFLNYICGANL-SVPTGKIVYTQFLNSRGGIEADVTVTRLSETAY 549
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL---------------------- 102
++ R + ++ +K NV+I ++ GV+
Sbjct: 550 LVVTPAVTRLADQTWMMRHKGDFNVVITDVTAGEGVLAVMGPNARKLLQKVSPNDFSNEV 609
Query: 103 ---SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------- 144
QE R + L + + +T
Sbjct: 610 NPFGTAQEIELGMGLARVHRVTYVGELGWEIYVGADMAGHAFETLFEAGQDMGLKLCGMH 669
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G D DA + + K +IG+ V + +
Sbjct: 670 MMDSCRIEKGFRHFGHDITCEDNV-IDAGLGF--AVKTDKEDFIGKAAVLERKESGPKNR 726
Query: 203 RP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARI----DKVDHAIKK 253
+T + L PI+ D +G L A+ + + + +
Sbjct: 727 MLQFKLTDAEPLLFHNEPIIRDGKYVGYLSSGNYGHTLGAAIGMGYVPCEGESAAEILGS 786
Query: 254 GMALTVHGVRVKAS 267
+ V G +VKA
Sbjct: 787 TYEIDVMGTKVKAE 800
>gi|227822724|ref|YP_002826696.1| dimethylglycine dehydrogenase precursor [Sinorhizobium fredii
NGR234]
gi|227341725|gb|ACP25943.1| dimethylglycine dehydrogenase precursor [Sinorhizobium fredii
NGR234]
Length = 815
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 92/316 (29%), Gaps = 55/316 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++ G+ A +L +IT V + +G+I+ + IEED F
Sbjct: 496 LPGFSRFRLKGEGARDWLSGLITGRVPK--PGRIGLAYFADDKGRIVTEMSVMAIEEDFF 553
Query: 66 ILEIDRSKRDSLIDKLLFYK----LR------------------SNVIIEIQPINGVVLS 103
L + + + LL ++ + S I+ +
Sbjct: 554 FLITAATAQWHDFEWLLKHRPAGAVFTLDDVTANFACQILSGPKSRAILAEVSDADLAKG 613
Query: 104 WNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144
W T + + R S A L E A+ ++
Sbjct: 614 WLTHQTAAIAGRYCQLVRVSFAGELGWEVHTKVEDTAAVFDAVWEAGQKHGLKPFGMEAL 673
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G D +D + +K + G+ + R + + + ++
Sbjct: 674 DSLRIEKGYRAWKGDLSTDYTI-LQGGLDRF--VDWSKPGFKGKAALEREKQQGVAKRFV 730
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHAIKKGMAL 257
+ + + P S + + +G AL + R D + + +
Sbjct: 731 TLTVEAGECDAPYMSTLWSGGEVVGETTSGNWGHRVGKSIALGMLRADLAVPGREIEVEI 790
Query: 258 TVH--GVRVKASFPHW 271
V+ P W
Sbjct: 791 FGDRFKATVEPDQPLW 806
>gi|222081893|ref|YP_002541258.1| aminomethyltransferase protein [Agrobacterium radiobacter K84]
gi|221726572|gb|ACM29661.1| aminomethyltransferase protein [Agrobacterium radiobacter K84]
Length = 377
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 55/305 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+ + G AI L +I T D+ + + +A+L +G ++ + ++++L
Sbjct: 59 VHLVGPHAIAVLDSITTRDMSKIYPGRSVYAAMLNDRGYFTDDCIVYRTGPNSWMLVHGS 118
Query: 71 RSKRDSLIDKL-----------LFYKLRSN--VIIE-----IQPINGVVLSWNQEHTFSN 112
S + L+ + + L V ++ + I + + + T
Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPVAVDYLAKYVPGIRDLKYFHHMQTTLFG 178
Query: 113 SSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINHGI-- 153
+ + R + + + I LR+ +
Sbjct: 179 APVMISRTGYTGERGYEIFVRGQDAPMVWDRIVAEGKEMGIIPCCFSVLDMLRVESYLLF 238
Query: 154 -------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ P D P + +D +S K + G E +R++ + + M+
Sbjct: 239 YPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGKERFKIFGML 295
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
I G + D ++G + + KK++AIAR+D VD A++ G L V G
Sbjct: 296 IDADGP-ADLGDEVFADGKKVGVITCPCYSALTKKSMAIARLD-VDKAVQ-GTKLEVRGK 352
Query: 263 RVKAS 267
+KAS
Sbjct: 353 SLKAS 357
>gi|268566597|ref|XP_002639764.1| Hypothetical protein CBG02210 [Caenorhabditis briggsae]
Length = 869
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 93/278 (33%), Gaps = 56/278 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A+ +LQ + +A+V P + + +G + +S++ + F + +
Sbjct: 537 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTIQ 595
Query: 74 RDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS- 111
++ ++ + + L++ V ++ I G+ +S N TF
Sbjct: 596 QERVLVWMKKWQSILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRC 655
Query: 112 -------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147
+ + L + N EKI K Y +L
Sbjct: 656 QEINIGMATGIRAISVTHCGELGWVIYIPNEVAQNVYEKILEAGKEYSLQHAGYYTLRQL 715
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI V D +T+ P + L + K +IG++ + R + ++ ++
Sbjct: 716 RIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVNKRFVQLL 771
Query: 208 -----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TD P G IL D +G L
Sbjct: 772 VDGHDKETDPWPQGGETILKDGRPVGLTTSAAYGFTLG 809
>gi|47212973|emb|CAF93361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 376
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 98/308 (31%), Gaps = 54/308 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV G+ + F+++++ AD+ L + +G I+ +++K ++ + +
Sbjct: 59 KVHGRDRVKFMESLVVADIAELRENQGTLTLFTNERGGIIDDLIVTKTDQGYLYVVSNAG 118
Query: 73 KRDSLIDKLL-----FYKLRS---NVIIEIQPINGVVLSWNQE----------HTFSNSS 114
D L + ++ +V +E ++ +
Sbjct: 119 CADKDSAHLKVKWAWLAEFKAAGFDVDLEFLEDAALIALQGPSMSRVLQEGLKEDLGKLT 178
Query: 115 FIDER----FSIADVLLHR------------------------TWGHNEKIASDIKTYHE 146
F+ + F + D + R H+E + +
Sbjct: 179 FMTSQMATVFGVPDCRITRCGYTGEDGVEISVPQSRVVEVTDKLLAHSEVKLAGLGARDS 238
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D T P +A + G + + G +VV RKR
Sbjct: 239 LRLEAGLCLYGNDI-DETTTPVEATLVWTIGKRRRQSKDFPGADVVIPQIKAKTARKRVG 297
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVH 260
+I+ T +PIL+ D IG + L A+ +D + + V
Sbjct: 298 LIS-TGPPVRQHTPILSPDGKVIGEVTSGCPSPCLKMNVAMGYVDTAFAKNGTAIQVEVR 356
Query: 261 GVRVKASF 268
V A+
Sbjct: 357 KRAVPATV 364
>gi|307202909|gb|EFN82129.1| Aminomethyltransferase, mitochondrial [Harpegnathos saltator]
Length = 454
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 47/266 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK A +L+++ T D+ L A + G IL +++K +ED + + + +
Sbjct: 136 HIIGKDAGEYLESLTTCDLKNLKNGAATLTVFTNDMGGILDDLIVTKDDEDKYFVVSNAA 195
Query: 73 KRDS----LIDKLLFYKLRSN-VIIEIQP--INGVVLSWNQEHTFSNSSFI--------- 116
+R+ L+++ +K V I+ G+V + S +
Sbjct: 196 RRNEDSQLLLERQEDFKRTGKNVRIDFLDPLQQGLVALQGPTAAAALQSLVKIDLQTLKF 255
Query: 117 ----------------------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELR 148
++ F I A L+ R + + + LR
Sbjct: 256 MNSVKTEVAGSQVRISRCGYTGEDGFEISVLAKDAVNLVERILEISHVKLAGLGARDSLR 315
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D + P +A + L + + G + + KR ++
Sbjct: 316 LEAGLCLYGNDM-NADTTPVEAALTWLIAKRRRVEANFPGAQRILSQIKTGAAEKRVGLL 374
Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGV 232
G G+PILT + +G +
Sbjct: 375 LGQGPPARQGAPILTPEGERVGKVTS 400
>gi|255712579|ref|XP_002552572.1| KLTH0C08030p [Lachancea thermotolerans]
gi|238933951|emb|CAR22134.1| KLTH0C08030p [Lachancea thermotolerans]
Length = 389
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 92/301 (30%), Gaps = 56/301 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A FL + D LP S +L +G I+ LI+K+ ++ F + +
Sbjct: 68 RLEGPGATQFLHRVTPTDFQALPAGQGTLSVLLNARGGIVDDTLITKVADNKFSIVTNAG 127
Query: 73 KRDSLIDKLL--------------------------FYKLRSNVIIEIQPINGVVLSWNQ 106
+ I L + L S V +Q + + +
Sbjct: 128 RAKEDIAFLNEQVQGFECRWEPVRDRALLALQGPEAKHVLGSLVAGGLQSLQDLYFGQRR 187
Query: 107 --------EHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
E + S + E S A L ++ A + LR+
Sbjct: 188 SFRAGTGVEIDVARSGYTGEDGFEVSVANSDATDLARMMLENSAVRAIGLAARDSLRLEA 247
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII------RKRP- 204
G+ + P +A ++ L S G +G E I R R
Sbjct: 248 GMCLYGHEL-DEDTTPVEASLNWLISKSRRDGS-LG-EFNGFSHIMGQIANKSATRARVG 304
Query: 205 MIITGTDDLPPSGSPILTDDIE--IGTLGVVVGKKALAIARIDKV---DHAIKKGMALTV 259
G + +P+ +D+ + +G + +LA I + K G L V
Sbjct: 305 FKYLGKGPAARTDAPVFSDEGKTQVGHVTSGSAAPSLAGINIGQAYVQKGLHKAGTQLFV 364
Query: 260 H 260
Sbjct: 365 G 365
>gi|99081014|ref|YP_613168.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
gi|99037294|gb|ABF63906.1| glycine cleavage T protein (aminomethyl transferase) [Ruegeria sp.
TM1040]
Length = 380
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 94/304 (30%), Gaps = 54/304 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F+Q + D+ T+ + I +G IL ++ ++ E+ F + +
Sbjct: 67 VEITGPDAAKFVQMLTPRDLSTMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 126
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPIN------------------------GVVLSWNQE 107
S ++ + S + ++I + + W +E
Sbjct: 127 S---DILLWAQGVAVHSGLDVQICEPDVSPLQLQGPKSGLVMQELFGESIMDLKYYWLRE 183
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151
I R + L + + + + T RI
Sbjct: 184 LDLDGIPLIVSRTGWSSELGYELYLRDGSQGDALWERIMAAGMQHGLKPGHTSSIRRIEG 243
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ + D T P + D L + + +IG+ + RIQ R + ++
Sbjct: 244 GMLSYHADADIHT-NPFELGFDRLVNLDMEAD-FIGKAALKRIQKEGPARLQVGLVIDAA 301
Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262
L + PI + IG + V ALA+ + + +T
Sbjct: 302 PLRGPNTTFWPITKNGETIGKVTSAVYSPRLEKNIALAMVDAEHAVIGSDVEVTMTSGAT 361
Query: 263 RVKA 266
Sbjct: 362 SASV 365
>gi|33864479|ref|NP_896039.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9313]
gi|59797841|sp|Q7TUI6|GCST_PROMM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33641259|emb|CAE22389.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9313]
Length = 374
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ G + LQA++ D+ + A + +L G IL +I K +
Sbjct: 51 SHMGVLRLEGTNPKDHLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVIYDLGTNKQD 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------EHTFSNSS 114
+ ++ I+ + + L + + + + NGV+L+ E S
Sbjct: 111 SQSLLIVINAACSKTDTIWLKQHLQPAGIALSDAKNNGVLLALQGPQATKVLERLSGESL 170
Query: 115 FIDERFSIADVLLHRTWGHNE--------------------KIASDIKTYHELRINHGIV 154
RF V + + K + + +L I
Sbjct: 171 ASLPRFGHRQVQFYGLGAKDPSSVFVARTGYTGEDGFELLLKAEAGRALWLKLLAEGVIP 230
Query: 155 D--PNTDFLPSTIFPHDALMDL-LNGISLTKGC-----------YIGQEVVSRIQHRNII 200
+ D L H D+ +N G ++G+ + + + I
Sbjct: 231 CGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAPFMGRTALEQQAEQGPI 290
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
R+ + + G P+L ++ ++G + +A+A+ + I +
Sbjct: 291 RRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVE 350
Query: 257 LTVHGVRVKASF 268
+ + G +A+
Sbjct: 351 VEIRGKHHRATV 362
>gi|119716534|ref|YP_923499.1| glycine cleavage system aminomethyltransferase T [Nocardioides sp.
JS614]
gi|119537195|gb|ABL81812.1| glycine cleavage system T protein [Nocardioides sp. JS614]
Length = 371
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 84/269 (31%), Gaps = 53/269 (19%)
Query: 22 FLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80
F+ +T D+ + A+ + G ++ ++ ED +L + + ++ +
Sbjct: 72 FVNRTLTNDLDRIGPGQAQYTLCCDDATGGVVDDLIVYLHAEDRVLLVPNAANTAEVVRR 131
Query: 81 LLFYKLRSNVIIEIQPINGVVLSWNQ----------------------EHTFSNSSFIDE 118
L V + + + VVL+ E TF++ + +
Sbjct: 132 LAA-VAPDGVTVTDRHRDFVVLAVQGTRSDEVLAEVGLPTGHDYMSFVEQTFADETVVVC 190
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY------------------HELRINHGIVDPNTDF 160
R + N +A + LR G D
Sbjct: 191 RTGYTGERGYELIAPN-AVAEPLWDALLAAGEEFGMLPCGLGARDTLRTEMGYPLHGQDI 249
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLPPSGSP 219
+ P++A + + K + G++ ++ + R+ R ++ TG P S
Sbjct: 250 SLD-VTPNEARLGW--AVGWRKDAFWGRDKLTAEKAAGPKRQLRGLVATGRGIPRPHMSV 306
Query: 220 ILTDDIEIGTLGVVV------GKKALAIA 242
LT D+ +G + LA+
Sbjct: 307 SLTPDVLLGEVTSGTFSPTLRKGIGLALI 335
>gi|299131740|ref|ZP_07024935.1| glycine cleavage system T protein [Afipia sp. 1NLS2]
gi|298591877|gb|EFI52077.1| glycine cleavage system T protein [Afipia sp. 1NLS2]
Length = 383
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 45/274 (16%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+ I+ D+L + R + +G IL +++
Sbjct: 60 SHMGQIRLRPKSGRIEDAATALERIVPQDILGIAPGRQRYALFTNDEGGILDDLMVANFG 119
Query: 62 EDTFILEIDRSKRDS---LIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
++ F++ K L D L L +I +Q V + + ++
Sbjct: 120 DELFLVVNAACKAADEAHLRDHLARDCEIIPLPDRALIALQGPKAVDVLAKFDAAIASMR 179
Query: 115 FID--ER-------------------------FSIADVLLHRTWGHNEKIASDIKTYHEL 147
F+D R + A+ L+ + + L
Sbjct: 180 FMDSGPRTLMGIPCFVSRSGYTGEDGFEISVPAADAERLVTTLLADAAVLPVGLGARDSL 239
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-----YIGQEVVSRIQHRNIIRK 202
R+ G+ D T P +A ++ + KG + G + R R+
Sbjct: 240 RLEAGLCLYGHDIDT-TTTPIEAALEWSIQKARRKGGAREGRFPGATTILRQLEEGAPRR 298
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
R + G+P+ D +G V
Sbjct: 299 RVGLKVEGRAPVREGAPLFADASSTNKIGRVTSG 332
>gi|332520482|ref|ZP_08396944.1| glycine cleavage system T protein [Lacinutrix algicola 5H-3-7-4]
gi|332043835|gb|EGI80030.1| glycine cleavage system T protein [Lacinutrix algicola 5H-3-7-4]
Length = 356
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 95/316 (30%), Gaps = 58/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + + D L A+ S + G I+ ++ K++E+T++
Sbjct: 49 SHMGEFLIEGPNALALIQKVCSNDASKLTVGKAQYSCMPNDDGGIVDDLIVYKLKEETYL 108
Query: 67 LEIDRSKRD--------------------------------------SLIDK----LLFY 84
L ++ S + L + FY
Sbjct: 109 LVVNASNIEKDWNWISSKNDVNADMRDLSEDYSLLAIQGPNAVEKMQPLSSHDLAEIKFY 168
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
V+ + I V++S + + + T + I +
Sbjct: 169 NF---VVGDFAGIENVIISATGYTGSGGFEIYCKNDEVKQIWDKVTQAGAKPIG--LAAR 223
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D T P +A + + TK + + + + + + RK
Sbjct: 224 DTLRLEMGYCLYGNDIT-DTTSPLEAGLGWI--TKFTKD-FTNSDALEEQKRQGVDRKLI 279
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+P G I+ + +IG + L I D K + +
Sbjct: 280 AFKLDERGIPRQGYDIVDNQGKKIGEVTSGTMSPSLGQGIGLGYVPIIFTDVNSKINIQI 339
Query: 258 TVHGVRVKASFPHWYK 273
V +YK
Sbjct: 340 RKKAVPATVVKLPFYK 355
>gi|237653863|ref|YP_002890177.1| glycine cleavage system aminomethyltransferase T [Thauera sp. MZ1T]
gi|237625110|gb|ACR01800.1| glycine cleavage system T protein [Thauera sp. MZ1T]
Length = 363
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A +L+ ++ DV L A S +L +G ++ ++ + + +
Sbjct: 53 SHMLALDLAGPDATTWLRGLLANDVAKLKDNGKALYSCMLNERGGVIDDLIVYRFSDADY 112
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 113 RIVVNAGTAD 122
>gi|45382157|ref|NP_990119.1| aminomethyltransferase, mitochondrial precursor [Gallus gallus]
gi|417042|sp|P28337|GCST_CHICK RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|222868|dbj|BAA01937.1| T-protein [Gallus gallus]
Length = 392
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 82/273 (30%), Gaps = 48/273 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ + FL++++ D+ L + + +G I+ +++ ED + +
Sbjct: 77 RVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNAG 136
Query: 73 KRDSLIDKLLFYK----LRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
D D+ + LR+ +V +E+ + + D+
Sbjct: 137 CAD--KDRAVMEGRAAELRAAGGDVHLEVSGQRAAGVQGPSMAQVLQAGLPDDLTKLTFM 194
Query: 119 ------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELR 148
A L R G E + + LR
Sbjct: 195 TSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSLR 254
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D + P +A + G + G ++ RKR +
Sbjct: 255 LEAGLCLYGNDI-DESTTPVEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLT 313
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ L P + + + +GT+ +L
Sbjct: 314 SVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLG 346
>gi|157364810|ref|YP_001471577.1| glycine cleavage system aminomethyltransferase T [Thermotoga
lettingae TMO]
gi|166989731|sp|A8F8M9|GCST_THELT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157315414|gb|ABV34513.1| glycine cleavage system T protein [Thermotoga lettingae TMO]
Length = 362
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 95/310 (30%), Gaps = 61/310 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ + F+ ++T L + + G I+ L + E +
Sbjct: 49 SHMGEIFVEGEDTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRFGEKQAM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWN----------------- 105
L ++ + + D + +S V + + G++
Sbjct: 109 LVVNAANIEKDFDWI---VNQSKQFNVTVRNLSDQYGLIAVQGPLSERFLKTFVSDIDSL 165
Query: 106 -----------------------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
E F D+ F++ + LL R K A +
Sbjct: 166 SYYTFASYSVFGKNCIVSRTGYTGEDGFEIYCHWDDTFTVWNELLQRGNNFGVKPAG-LG 224
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
R+ + D T P + + + + K +IG++ + + + + ++
Sbjct: 225 ARDVCRLEASYMLYGNDM-DETTTPLEVGLSWV--VKFDKD-FIGKDSLIKQKELGLQKR 280
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ + G + + +G + ALA+ + I +
Sbjct: 281 IRGLEISDRRIARHGMYVFKGEKRVGVVTSGTFSPTLEKPVALAML---SSEIKISDEIE 337
Query: 257 LTVHGVRVKA 266
+ + G +VKA
Sbjct: 338 VDIRGSKVKA 347
>gi|296139242|ref|YP_003646485.1| glycine cleavage system protein T [Tsukamurella paurometabola DSM
20162]
gi|296027376|gb|ADG78146.1| glycine cleavage system T protein [Tsukamurella paurometabola DSM
20162]
Length = 366
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 51/311 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ ++TAD+ + A+ + G ++ ++ + +D
Sbjct: 53 SHLGKATVAGPGAKDFVNRVLTADLDKIRPGKAQYTLCTNETGGVIDDLIVYYVSDDELF 112
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + +++ L R ++ +Q V+ + ++
Sbjct: 113 LVPNAANTAAVVAHLRERAPEGITITDQHRDYAVLAVQGPKSAEVLAAVGLPTDMEYMAY 172
Query: 116 IDERFSIADVLLHRT-------------WGHNEKI--------------ASDIKTYHELR 148
D + V + RT WG E + + + LR
Sbjct: 173 EDASLNGTPVRVCRTGYTGEHGYELIPAWGDAETVFRALLPEITVRDGQPAGLGARDTLR 232
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMII 207
G + I P A + K ++G++ + + R+ +
Sbjct: 233 TEMGYPLHGHELTVD-ITPVQARAGW--AVGWKKPEFVGRDALQAEKEAGPARRLWGLKA 289
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH--- 260
TG L + D IG+ +A+A ID ++KG +TV
Sbjct: 290 TGKGVLRADLPVLGADGARIGSTTSGTFSPTLKTGIALALIDS-GAGVEKGTVVTVDVRG 348
Query: 261 -GVRVKASFPH 270
+ + + P
Sbjct: 349 RAIECEVTLPP 359
>gi|152987967|ref|YP_001348169.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PA7]
gi|150963125|gb|ABR85150.1| glycine cleavage system T protein [Pseudomonas aeruginosa PA7]
Length = 373
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 84/292 (28%), Gaps = 54/292 (18%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85
++ D+L LP R + QG IL +++ + D +L ++ + + + L +
Sbjct: 74 LVPVDILDLPVGQQRYALFTDEQGGILDDLMVANLG-DCLLLVVNAACKHQDLAHLRRH- 131
Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI----------------------- 122
L +E +L+ + + +
Sbjct: 132 LEGRCSVEPLFEERALLALQGPAAVRVLERLAPQVAQMTFMQFARVELLGQDCYVSRSGY 191
Query: 123 --------------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
A+ L R E + LR+ G+ D +T P
Sbjct: 192 TGEDGYEISVPAEHAEALARRLLAEPEVAPIGLGARDSLRLEAGLCLYGHDMDSATT-PV 250
Query: 169 DALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-T 222
+A + + G + G E + Q + + KR + G+ I+
Sbjct: 251 EASLGWAISKARRADGVRAGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDA 310
Query: 223 DDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268
D IG + G LA+ + + + V G V
Sbjct: 311 DGRVIGKVSS--GGFGPTLNAPLAMGYVPSALAGLGSEVTAMVRGKPVTLVV 360
>gi|295687778|ref|YP_003591471.1| glycine cleavage system T protein [Caulobacter segnis ATCC 21756]
gi|295429681|gb|ADG08853.1| glycine cleavage system T protein [Caulobacter segnis ATCC 21756]
Length = 369
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 93/264 (35%), Gaps = 40/264 (15%)
Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ ++ G++ A F + +++AD L R +L G ++ + ++ +ED
Sbjct: 54 SHMGQARIRGENPAKSF-EKVVSADYQGLKPGKQRYGVLLNADGGVIDDLMTARPDEDGL 112
Query: 66 ILEIDRSKRD--------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ ++ + +D L + +L ++ +Q + + F+D
Sbjct: 113 FVVVNGACKDNDYAIIARELAGEATVTRLEDRALLALQGPEAAAVLAAHVPESAQMVFMD 172
Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150
+ + A + T +E++ + LR+
Sbjct: 173 AKAVTAFGVDAIVSRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSLRLE 232
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P +A ++ G S + G Y+G + ++R ++ R R +
Sbjct: 233 AGLPLYGHDL-DETVSPIEAGLNFAVGKSRREAGDYLGADRIARELAGDLTRVRVNLKVL 291
Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232
G+ I + IG +
Sbjct: 292 EGAPAREGAEIADEAGAVIGKVTS 315
>gi|220935921|ref|YP_002514820.1| glycine cleavage system aminomethyltransferase T [Thioalkalivibrio
sp. HL-EbGR7]
gi|254797884|sp|B8GNE2|GCST_THISH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|219997231|gb|ACL73833.1| glycine cleavage system aminomethyltransferase T [Thioalkalivibrio
sp. HL-EbGR7]
Length = 363
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 100/308 (32%), Gaps = 49/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +L+ ++ DV L A S +LTP+G ++ + + + +
Sbjct: 50 SHMTVVDVQGNGARDYLRFLLANDVAKLKVPGKALYSCMLTPEGGVVDDLITYYLSDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS- 121
L ++ + RD L + + R+ +V+++ + +V S +D +
Sbjct: 110 RLVVNAATRD---KDLAWMRDRATGFDVLLQERDDLAMVAVQGPHGRDKALSVLDGEIAR 166
Query: 122 ------------IADVLLHRTWGHNE-------KIASDIKTYHE---------------- 146
D + RT E A +
Sbjct: 167 VADALSPFVGGQAGDWFVGRTGYTGEDGFEIMLPAAEAPAFWDRLKVAGVQPAGLGARDT 226
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ G+ D + P ++ + + ++G+ + + + +R+ +
Sbjct: 227 LRLEAGMNLYGQDM-DEQVSPLESGLAWTVAFEPAERDFVGRAALEKQKAAGGLRRFVGL 285
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262
+ + +L G + ++A+AR+ + + +
Sbjct: 286 VLEGRGVLRGHMRVLCGAAGEGEITSGGFSPTLGVSIALARV-PAGTGERVEVDVRGKPQ 344
Query: 263 RVKASFPH 270
+ P
Sbjct: 345 PARLVKPP 352
>gi|114328490|ref|YP_745647.1| aminomethyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114316664|gb|ABI62724.1| aminomethyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 369
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 101/294 (34%), Gaps = 50/294 (17%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------------ 58
I V G A+ L ++T+D+ + + ++I+ +G I+ +I
Sbjct: 61 IINVSGPDAMAVLNNLVTSDLAKISSGSSLITSIVNDEGGIIDDVIIYVDSKTEFRVSHG 120
Query: 59 -------------------KIEEDTFILEIDRSKR-DSLIDKLLF------YKLRSNVII 92
+ ++D IL + D L Y + +
Sbjct: 121 GGTLEPVLMKDIVGHNVVAERDDDVHILSLQGPLSGDILQPHTELPLSSLSYFSHAQTTL 180
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+P+ ++ E + +E I D++L +R+ G
Sbjct: 181 FGKPVRIARGGYSGETGYEVFCTSEEAGPIWDMILE-AGKSYGAAPVSWSCLDIVRLEGG 239
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG-TD 211
++ D P + M I L K + G++ + + R R + + +
Sbjct: 240 LLFFPYDMPAENTTPWEVNMGWS--IDLQKTAFRGKKALEAL--RGQERSTIIGLEVLSK 295
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHG 261
+ +G+PI D +++G + + K+LAIA I A+ G A++V
Sbjct: 296 EAAEAGTPIFHDGVQVGQVTSSIFSQYLMKSLAIATIKPSLSAL--GTAVSVGE 347
>gi|326798588|ref|YP_004316407.1| aminomethyltransferase [Sphingobacterium sp. 21]
gi|326549352|gb|ADZ77737.1| Aminomethyltransferase [Sphingobacterium sp. 21]
Length = 359
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 94/308 (30%), Gaps = 52/308 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A+ +Q I + D L + + I G I+ FL+ +I+ T++L ++ S
Sbjct: 56 LKGERALELVQKISSNDASKLFDGKIQYACIPNETGGIVDDFLVYRIDAKTYLLVVNASN 115
Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115
D + Y L + +Q + + L + +TF F
Sbjct: 116 IQKDWDWISKYNTFGVEMKDISDKTSLFAVQGPKATEALQSLTSLDLGEMEYYTFKKGVF 175
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152
+ + G E + + LR+ G
Sbjct: 176 AGIDNVLVSATGYTGAGGFEIYVDNEHAKEVWEAIMNAGKPFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + TK ++ E + + + I RK
Sbjct: 236 FCLYGNDI-DDTTSPLEAGLGWV--TKFTKD-FVNAENLKKQKEEGIQRKLVGFEMIERG 291
Query: 213 LPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G ++ +D IG + L + + + + V+
Sbjct: 292 IPRHGYELVNENDQPIGHVTSGTQSPTLQKSIGLGYLSKEYSKEGTEIYVKIRDKKVKAV 351
Query: 266 ASFPHWYK 273
S P + K
Sbjct: 352 VSKPPFIK 359
>gi|89076036|ref|ZP_01162399.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34]
gi|89048271|gb|EAR53852.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34]
Length = 372
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 97/271 (35%), Gaps = 50/271 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ A L+ ++ D+L LP R + G I +++ D
Sbjct: 54 SHMGQVRLKGQHAATLLETLVPVDILDLPVGKQRYAVFTNENGGIEDDLMVTNFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---------TFSNSSFID 117
L ++ + ++ I L + L+ V +E+ ++ + T S+ F+D
Sbjct: 113 LVVNAACKEQDIAHLKAH-LKDGVELEVIEDRALLALQGPKAAMVLAELNPTVSDMVFMD 171
Query: 118 E---------------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
A+ L NE + LR+
Sbjct: 172 AAKMTLLDVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVV-SRIQHRNIIRK 202
G+ D P T P +A + G+ +G + G +++ ++Q + ++RK
Sbjct: 232 CGLCLYGHDLDP-TTTPFEASLMWAITPSRRAGGV--REGGFPGADIILEQLQTKQVLRK 288
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
R ++ + G+ + +D EIG +
Sbjct: 289 RVGLVGQSKAPVREGTKLFDAEDNEIGIVTS 319
>gi|261342308|ref|ZP_05970166.1| glycine cleavage system T protein [Enterobacter cancerogenus ATCC
35316]
gi|288315649|gb|EFC54587.1| glycine cleavage system T protein [Enterobacter cancerogenus ATCC
35316]
Length = 364
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119
L ++ + R+ + + + + I ++ ++ + + F DE+
Sbjct: 110 RLVVNSATREKDLSWISQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTDEQ 164
>gi|146329402|ref|YP_001210080.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A]
gi|146232872|gb|ABQ13850.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A]
Length = 365
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 93/271 (34%), Gaps = 44/271 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ I + G L+ I+ D L+LP R + +L QG I ++++
Sbjct: 47 SLFDVSHMGQILIRGADVAEKLERIMPMDFLSLPVGKQRYALLLNDQGTIEDDLMVTRRA 106
Query: 62 EDTFILEIDRSKRD---SLIDKLLFYKLRS---NVIIEIQP------------------- 96
+D F L ++ S+++ +++ K ++ +I +Q
Sbjct: 107 DD-FYLVVNASRKEHDFAILQKTFGDAMQWWQDRALIALQGPKSAAVLSVLNPAVKDLKF 165
Query: 97 ---------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
+S + IA L + + + + L
Sbjct: 166 MQAGMFKILEEDCWVSRSGYTGEDGFEISIP-AKIAMALANALLSDSRVHPAGLGARDSL 224
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRK 202
R+ G+ D T P +A + +G Y G E++++ + R+
Sbjct: 225 RLEAGLCLYGNDIDT-TTTPIEAGIAWAIQKVRKPEGEREGGYPGAEIIAQHIKNGVARR 283
Query: 203 RPMIITGTDDLPP-SGSPILTDDIEIGTLGV 232
R + + LP + I +D E+G +
Sbjct: 284 R-VGFSIEGKLPVRQHTKIFHNDKEVGEITS 313
>gi|56461194|ref|YP_156475.1| glycine cleavage system aminomethyltransferase T [Idiomarina
loihiensis L2TR]
gi|61213263|sp|Q5QVA8|GCST_IDILO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56180204|gb|AAV82926.1| Glycine cleavage system T protein [Idiomarina loihiensis L2TR]
Length = 359
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 45/304 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A+ +++L G ++ ++ E+ +
Sbjct: 50 SHMTIVDVEGSQAQAFLRYLLANDVAKLKTEGKAQYTSMLNENGGVIDDLIVYFFSENAY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPING-VVLSWNQEHTFSNSSFIDERFSIAD 124
+ ++ + RD + + +V + + G + L + E+++ D
Sbjct: 110 RMVVNSATRDRDLAWIEKVAADFDVTTKERDDMGMLALQGPKAADKIQGVLTAEQYAEID 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + + LR+
Sbjct: 170 GMKPFVGKDVGDYFIATTGYTGEKGYEIVVPAEQLEALWNDLLKADVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D I P +A M +IG++ + + + K ++
Sbjct: 230 EAGMNLYGQDM-DENITPLEANMGWSVAFEPADRDFIGRKALEQKKAEGHD-KLVGLVME 287
Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ G + + E GT +G ++A+AR+ + + + VK
Sbjct: 288 EKGVLRHGQKVTVEGGEGIITSGTFSPTLG-FSVAMARV-PSSVGDTAEVEMRKKQMPVK 345
Query: 266 ASFP 269
P
Sbjct: 346 VVKP 349
>gi|163748546|ref|ZP_02155800.1| aminomethyltransferase [Shewanella benthica KT99]
gi|161332124|gb|EDQ02801.1| aminomethyltransferase [Shewanella benthica KT99]
Length = 364
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 99/310 (31%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKIPGKALYGGMLDYNAGVIDDLITYYLTDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
+ ++ + R+ + + +V+I +P ++ +S +
Sbjct: 110 RIVVNSATREKDLAWIAQEVKGFDVVITERPELAMIAVQGPNAKVKAASVFNTNQNAAVE 169
Query: 118 ---ERFSI-ADVLLHRTWGHNEKI--------ASDIKTYHE----------------LRI 149
F + AD L T G+ + A + LR+
Sbjct: 170 GMKPFFGVQADSLFIATTGYTGETGYEIIVPEAEAEALWQALLEAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M + G+E ++ I+ K +I
Sbjct: 230 EAGMNLYGLDM-DESVNPLAANMGWTIAWEPEDRNFNGREALAAIKAAGT-EKLVGLIME 287
Query: 210 TDDLPPSGSPILTDDIEI---------GTLGVVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ G I D E GT +G ++A+AR+ + + +
Sbjct: 288 AKGVIRPGMSIFFTDSEGNEQQGIITSGTFSPTLG-YSIAMARVPRSIGD-TAEVEIRKK 345
Query: 261 GVRVKASFPH 270
V VK P
Sbjct: 346 RVAVKVIKPS 355
>gi|319784834|ref|YP_004144310.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317170722|gb|ADV14260.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 789
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 95/304 (31%), Gaps = 54/304 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G + LQ +T DV L SA+ G ++ + ++ +D F
Sbjct: 459 LSPLRKFEVTGPDSEALLQYTLTRDVKKLGVGQVVYSAMCYEHGGMIDDGTLLRLGKDNF 518
Query: 66 -IL---EIDRSKRDSLIDKL----------------------LFYKLR-----SNVIIEI 94
+ ++ KL LR S + I
Sbjct: 519 RWIGGDDLSGEWLRETATKLGLNVLVRSSTDQMHNVAVQGPKSRDILREVIWTSPLQPSI 578
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIK--------- 142
++ + + + + R L + W EK+ I
Sbjct: 579 DELDWFRFAVARIGGGNGIPVVVSRTGYTGELGYEIWCHPRDAEKVFDAIWEAGQPHGLK 638
Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+RI G++ +F T P +A + + ++G+E + R +
Sbjct: 639 PMGLQALDMVRIEAGLIFAGYEFSDQTD-PFEAGIGFTVPLKSKTDDFVGREALIRRKEH 697
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKK 253
+ + I D+ G + +IG + V K +A+AR+D A+
Sbjct: 698 PQTKLVGLDIDANVDVGH-GDCVHVGRAQIGVVTSGMRSPVLNKTIALARLDVTHSAVGT 756
Query: 254 GMAL 257
+ +
Sbjct: 757 EVEI 760
>gi|53802493|ref|YP_112882.1| glycine cleavage system aminomethyltransferase T [Methylococcus
capsulatus str. Bath]
gi|59797675|sp|Q60BW3|GCST_METCA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|53756254|gb|AAU90545.1| glycine cleavage system T protein [Methylococcus capsulatus str.
Bath]
Length = 360
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 34/259 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + V G A PFL+ ++ DV L +L G I+ ++ I++ F
Sbjct: 50 SHLGVVDVEGLQAAPFLRRVLANDVARLAEPGRMLYGCMLNQDGGIVDDLVVGFIDDRRF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI---------------NGVVLSWNQEHTF 110
L ++ R+ + L +V + + + VV + +
Sbjct: 110 RLILNAGTREKDLSWLHRQAAPFSVTVTPRDDLAMIALQGPDSPRIADAVVAAGSSGLKP 169
Query: 111 SNSSFIDERF-----------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
++ +RF L R + LR+ G+
Sbjct: 170 FTATQRGDRFIARTGYTGEDGFEIILPHAEAGSLWRQLFQAGARPCGLGARDTLRLEAGM 229
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D T+ P + + +IG+ + R + K +I +
Sbjct: 230 RLYGQDM-DETVTPLACGLGWTVAWEPEERDFIGRAALERERIGGSPSKFVGLILEEPGI 288
Query: 214 PPSGSPILTDDIEIGTLGV 232
SG + ++ G +
Sbjct: 289 LRSGQKVAVANVGEGVVTS 307
>gi|68535275|ref|YP_249980.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
jeikeium K411]
gi|260578514|ref|ZP_05846426.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC
43734]
gi|123651656|sp|Q4JXU5|GCST_CORJK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|68262874|emb|CAI36362.1| glycine cleavage system T protein [Corynebacterium jeikeium K411]
gi|258603353|gb|EEW16618.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC
43734]
Length = 389
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A FL A+I+ + + A+ S I T G I+ + ++ ++
Sbjct: 51 LSHMGEVRVTGPQAAEFLDHALIS-KLSAVKVGKAKYSMICTESGGIIDDLITYRLGDNE 109
Query: 65 FILEIDRSKRDSLIDKLL 82
F++ + D+++ L
Sbjct: 110 FLIVPNAGNVDNVVSALQ 127
>gi|325109415|ref|YP_004270483.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305]
gi|324969683|gb|ADY60461.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305]
Length = 364
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 100/312 (32%), Gaps = 58/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A FL + T DV L R + G LI ++ D F+
Sbjct: 49 SHMGRVRVSGSEADAFLNYVTTIDVTKLQPGRIRYALATNEHGGTKDDILIYRLA-DHFL 107
Query: 67 LEIDRSKRDSLID----KLLFYK-------LRSNVIIEIQPINGVVL------------- 102
+ ++ S R+ L++ +L + S +I +Q + +
Sbjct: 108 VVVNASNREKLLEAWQAELSNFAGTEMQDETFSTAMIAVQGPHAAAILESMSAGVDDLRY 167
Query: 103 -SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------- 144
W E T + + R G NE+I ++ +
Sbjct: 168 YRWR-EITLDGTQYFVSRTGYTGEDGFELIGPNEQI---VELWGQILQAGAEFGVTPCGL 223
Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ + + A + I +K ++G+E + R
Sbjct: 224 GCRDTLRLEAGMPLYGHEL-SEELDGVSAGLQF--AIDFSKTDFLGKEPLERRNSEGTQL 280
Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMA 256
R + + + + + +G + KA+A+A + I +
Sbjct: 281 IRVGLELEGRRIAREHAEVFNAEGETVGAVSSGTFSPTLNKAIAMAYVRPDVATIGTKLT 340
Query: 257 LTVHGVRVKASF 268
+ + G + AS
Sbjct: 341 IDIRGTKAPASV 352
>gi|134102066|ref|YP_001107727.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
gi|133914689|emb|CAM04802.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
Length = 815
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 49/263 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69
+V G+ A+ LQ + T + P + +L P G I ++++ D F +
Sbjct: 506 EVSGRGALELLQRLTTNQLDR-PPGYVTYTLMLEPTGGIRADITVARLSRDVFQVGCNGP 564
Query: 70 --------------------------------DRSKRDSLI------DKLLFYKLRSNVI 91
R L + F++ R +
Sbjct: 565 RDIAWLRGHADETVSVRDITGGTCCIGLWGPRARDILAPLAGEDISHEAFRFFRARR-LH 623
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ P+ + LS+ E + + + + D+L GH + + ++ LR+
Sbjct: 624 VREVPVTALRLSYVGELGWELYTSAEFGLRLWDLLAAEGAGHG-AVPAGRGAFNGLRMEK 682
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G TD S P +A +D + KG ++G++ + R + N R++ +T D
Sbjct: 683 GYRAWGTDMW-SVHDPDEAGLDF--AVKTGKGDFVGRDALLR-RRENPPRRKLCCVTIDD 738
Query: 212 DLPPSGS-PILTDDIEIGTLGVV 233
GS P+L +G
Sbjct: 739 GTVLMGSEPVLKGSETVGFTTSA 761
>gi|317968272|ref|ZP_07969662.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CB0205]
Length = 370
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 62/307 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS------KI 60
S+ +++ G + +Q ++ +D+ + A S +L +G I +I
Sbjct: 55 SHMGVLRLRGANVKDAMQGLVPSDLFRIGPGEACYSVLLNAEGGIRDDLIIYDRGWLENE 114
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVI---IEIQPI--NGVVLSWNQEHT------ 109
+ +L I+ + +S +RS + IE+ + +G +L+ T
Sbjct: 115 QVHELVLVINAACAESDTAW-----MRSQLEPAGIELIDLKGSGTLLALQGPETAQLLEE 169
Query: 110 FSNSSFID-ERF-------------------------------SIADVLLHRTWGHNEKI 137
+ S RF + A T
Sbjct: 170 LAGCSLAGLPRFGHRELTLPGLGEAFVGRTGYTGEDGFELLLSADAGQRFWTTCLERGVK 229
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ LR+ G+ +D ST P +A + L + + K +IG+ V+ +
Sbjct: 230 PCGLGARDTLRLEAGMHLYGSDMDASTS-PLEAGLGWLVHLEMPKD-FIGRPVLEQQTAD 287
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKK 253
+ R+ + +P G P+L + +GT+ +A+A + A K
Sbjct: 288 GLKRRLVGLKLQGRAIPRHGYPVLQNGEVVGTVTSGTWSPSLQAGIALASV--ATGAAKL 345
Query: 254 GMALTVH 260
G +L V
Sbjct: 346 GTSLAVE 352
>gi|86130709|ref|ZP_01049309.1| aminomethyltransferase [Dokdonia donghaensis MED134]
gi|85819384|gb|EAQ40543.1| aminomethyltransferase [Dokdonia donghaensis MED134]
Length = 363
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ A+ LQ + + DV + A+ + G I+ ++ +I+ED ++
Sbjct: 49 SHMGEFLVSGEKALDLLQWVCSNDVSKIKVGGAQYNCFPNATGGIVDDLIVYRIKEDQYM 108
Query: 67 LEIDRSKRD 75
L ++ S D
Sbjct: 109 LVVNASNID 117
>gi|257454446|ref|ZP_05619708.1| glycine cleavage system T protein [Enhydrobacter aerosaccus SK60]
gi|257448212|gb|EEV23193.1| glycine cleavage system T protein [Enhydrobacter aerosaccus SK60]
Length = 377
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 5/161 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIE--ED 63
S+ + G+ A +LQ ++ DV L + A SA+L G ++ ++ ++ E
Sbjct: 56 SHMVVTDIAGQDAKAWLQKLLANDVAKLKFVGKALYSAMLNENGGVIDDLIVYRMNDAET 115
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+ + + + RD + + V I +P +L+ + S ++ +
Sbjct: 116 EYRIVSNAATRDKDLAQFDKVAKDFAVTITERPEL-AMLAVQGPNALQKLSQAKPNWADS 174
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST 164
L G + + + R + D LP
Sbjct: 175 LATLKPFVGK-DLTDIEGADWFVARTGYTGEDGVEVILPQA 214
>gi|291004899|ref|ZP_06562872.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
Length = 822
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 49/263 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69
+V G+ A+ LQ + T + P + +L P G I ++++ D F +
Sbjct: 513 EVSGRGALELLQRLTTNQLDR-PPGYVTYTLMLEPTGGIRADITVARLSRDVFQVGCNGP 571
Query: 70 --------------------------------DRSKRDSLI------DKLLFYKLRSNVI 91
R L + F++ R +
Sbjct: 572 RDIAWLRGHADETVSVRDITGGTCCIGLWGPRARDILAPLAGEDISHEAFRFFRARR-LH 630
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ P+ + LS+ E + + + + D+L GH + + ++ LR+
Sbjct: 631 VREVPVTALRLSYVGELGWELYTSAEFGLRLWDLLAAEGAGHG-AVPAGRGAFNGLRMEK 689
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G TD S P +A +D + KG ++G++ + R + N R++ +T D
Sbjct: 690 GYRAWGTDMW-SVHDPDEAGLDF--AVKTGKGDFVGRDALLR-RRENPPRRKLCCVTIDD 745
Query: 212 DLPPSGS-PILTDDIEIGTLGVV 233
GS P+L +G
Sbjct: 746 GTVLMGSEPVLKGSETVGFTTSA 768
>gi|50119688|ref|YP_048855.1| glycine cleavage system aminomethyltransferase T [Pectobacterium
atrosepticum SCRI1043]
gi|59797740|sp|Q6D976|GCST_ERWCT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|49610214|emb|CAG73657.1| glycine cleavage system T protein (aminomethyltransferase)
[Pectobacterium atrosepticum SCRI1043]
Length = 371
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + V I + +V +
Sbjct: 110 RLVVNSATREKDLAWIEQHAAAFGVDIRERDELALVAVQGPQA 152
>gi|239624330|ref|ZP_04667361.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520716|gb|EEQ60582.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 384
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I GK A+ L ++T D + AR S + +G ++ ++ K+ +D +
Sbjct: 75 SHMGEIICKGKDALKNLNMLLTNDYTVMAEGQARYSPMCNEEGGVVDDLIVYKVRDDCYF 134
Query: 67 LEIDRSKRD 75
+ ++ S +D
Sbjct: 135 IVVNASNKD 143
>gi|148358276|ref|YP_001249483.1| glycine cleavage system T protein [Legionella pneumophila str.
Corby]
gi|296105627|ref|YP_003617327.1| glycine cleavage system T protein [Legionella pneumophila 2300/99
Alcoy]
gi|166221556|sp|A5I9T7|GCST_LEGPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|148280049|gb|ABQ54137.1| glycine cleavage system T protein [Legionella pneumophila str.
Corby]
gi|295647528|gb|ADG23375.1| glycine cleavage system T protein [Legionella pneumophila 2300/99
Alcoy]
Length = 360
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 53/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
+ ++ + R + + + R+ V ++ + ++ S +
Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164
Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144
F DV L + +
Sbjct: 165 VDAVSTLTPFECVDVDHWFFARTGYTGEDGLEIIVPNEFITQLWNDLLNAGVTPCGLGAR 224
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ D T P ++ + +IG + + + I RK
Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLAWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + G ++ + G + +++A+AR+ V+ + + +
Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342
Query: 261 GVRVKASFPHWYK 273
+ K P + K
Sbjct: 343 LIPAKVGKPRFIK 355
>gi|227329474|ref|ZP_03833498.1| glycine cleavage system aminomethyltransferase T [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 371
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDNF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + V I + +V +
Sbjct: 110 RLVVNSATREKDLAWIGQHAAPFGVEIRERDDLALVAVQGPQA 152
>gi|254503753|ref|ZP_05115904.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222439824|gb|EEE46503.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 813
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/319 (13%), Positives = 95/319 (29%), Gaps = 60/319 (18%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S+ I+V G A FL + AD+ ++P + +L G I ++++ E
Sbjct: 485 LYDMSSFGKIRVEGPDAERFLNHVCGADM-SVPTGRIVYTQMLNEAGGIEADVTVTRLSE 543
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+++ + R + L + V++ VL+ + I
Sbjct: 544 TAYLMVTPAATRLADQTWLRRHMGDHQVVLTDVTSGEAVLALMGPRSRELLGRISPNDFT 603
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHG----------------IVDPNTDFLPSTIF 166
+ +G + I + R+++ + + +
Sbjct: 604 NET---NPFGTAQDIEIGMALARAHRVSYVGELGWEIYVPTEFAAHVFETLREAGRDEGL 660
Query: 167 PHDALMDLLN------------------------GISL----TKGCYIGQEVVSRIQHRN 198
+ ++ G+ +K +IG++ V +
Sbjct: 661 KL-CGLHAMDSCRMEKAFRHFGHDITCEDHVIDAGLGFAAKTSKPGFIGRDAVLERKETG 719
Query: 199 IIRKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVVGKKAL-AIARI-------DKVD 248
+ R + D P PIL + G L AL A + +
Sbjct: 720 -PKSRLVQFQLQDPEPMLYHAEPILREGEVCGYLSSGAYGHALGAAIGLGYVPCDGESAA 778
Query: 249 HAIKKGMALTVHGVRVKAS 267
+ + + + G RV A+
Sbjct: 779 NVLGSAYEIEIAGTRVPAT 797
>gi|171056846|ref|YP_001789195.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix
cholodnii SP-6]
gi|170774291|gb|ACB32430.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix
cholodnii SP-6]
Length = 790
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 86/297 (28%), Gaps = 66/297 (22%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A +Q +T D+ L SA+ P G +L + ++ D F
Sbjct: 460 LSALRKFEVIGPDAEALMQHCLTRDIKKLAVGQVVYSAMCYPHGGMLDDGTLLRLGPDNF 519
Query: 66 ILEIDRSKR----DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111
KL V I+ + ++ +
Sbjct: 520 RWICGEDYAGIWLREQAQKLGM-----KVWIKSASDHIHNIAVQGPRSRELLSQMVSSPG 574
Query: 112 ----------------------NSSFIDERFSIADVLLH----------RTWGHNEKIAS 139
+ R L + R W ++ +
Sbjct: 575 TQPTLDKLGWFRFLVGRLDDHNGCPIMVSRTGYTGELGYEVWCHPSDAPRVWARIWELGA 634
Query: 140 D-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VV 191
++ LRI G+V +F T P +A + + +IG++ ++
Sbjct: 635 PLGLTPLGLEALDTLRIEAGLVFAGYEFCDQTD-PFEAGIGFCVPLKSKTDDFIGRDALI 693
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
R H RK ++ ++ G + ++G + + +A+ RI
Sbjct: 694 ERAAH--PQRKLVGLVLDGNETAAHGDGVYIGHAQVGVITSATRSPLTGQNIALCRI 748
>gi|239944453|ref|ZP_04696390.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 15998]
gi|239990910|ref|ZP_04711574.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 11379]
gi|291447917|ref|ZP_06587307.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 15998]
gi|291350864|gb|EFE77768.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 15998]
Length = 371
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 54/299 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E
Sbjct: 52 LSHMGEITVTGLEAAAFLSYALVGN-IATVGNGRARYTMIVQEDGGIVDDLIVYRLGETE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93
+++ + ++D L Y L + + +
Sbjct: 111 YMVVANAGNAQIVLDALTERVGGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170
Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143
+ + ++ F+ + A L + I +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEALWQALTEAGAPHGLIPCGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + + + P DA + + + K G +IG+E ++ R
Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFIGREALTAAAERAETAP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254
RK +I +P +G P++ D IG + L A+A +D A G
Sbjct: 288 PRKLVGLIAEGRRVPRAGFPVVADGKVIGEVTSGAPSPTLGKPIAMAYVDAAFAAPGTG 346
>gi|220914199|ref|YP_002489508.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
chlorophenolicus A6]
gi|219861077|gb|ACL41419.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
chlorophenolicus A6]
Length = 830
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 55/273 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ LQ + TA++ + +L QG + ++++ EDTF L +
Sbjct: 511 LEVSGPGALKLLQELTTAEMNK-KPGAVTYTLLLDEQGGVRSDITVARLSEDTFQLGANG 569
Query: 72 SKRDSLIDKLLFYK---------------------------------------------- 85
+ + D+ ++
Sbjct: 570 NIDTAYFDRAARHQTANGTAEDWVQVRDTTGGTCCIGLWGPLAREVVGEVSSDDFTNDGL 629
Query: 86 --LRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
RS V+I P+ + LS+ E + + D + D L + IA+
Sbjct: 630 KYFRSKQVVIGGVPVTAMRLSYVGELGWELYTSADNGQRLWDAL-WKAGQPFGIIAAGRA 688
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIR 201
+ LR+ G TD P +A + + + K ++G+ + R + + R
Sbjct: 689 AFSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKEDFVGKAALEGRTEETSARR 745
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + + P+ D +G +
Sbjct: 746 LRCLTVDDGRSIVLGKEPVFYKDQAVGYVTSAA 778
>gi|237729847|ref|ZP_04560328.1| glycine cleavage system aminomethyltransferase T [Citrobacter sp.
30_2]
gi|226908453|gb|EEH94371.1| glycine cleavage system aminomethyltransferase T [Citrobacter sp.
30_2]
Length = 364
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 96/312 (30%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123
L ++ + R+ + + + + I ++ ++ + + F DE R ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169
Query: 124 D----------------------------------VLLHRTWGHNEKIASDIKTYHELRI 149
R + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVQAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN----------- 198
G+ + I P +A M +IG+E + + +
Sbjct: 230 EAGMNLYGQEMDEG-ISPLEANMGWTIAWEPADRDFIGREALEMQREKGHEQLVGLVMTE 288
Query: 199 -IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 289 KGVLRNELPVRFTDASGNQHEGIITSGTFSPTLG-----YSIALARV-PAGIGETAIVQI 342
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 343 RNREMPVKVTKP 354
>gi|194762058|ref|XP_001963177.1| GF15818 [Drosophila ananassae]
gi|190616874|gb|EDV32398.1| GF15818 [Drosophila ananassae]
Length = 405
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 64/310 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK A L+++ TAD+L P + T QG IL +++K+ E + + +
Sbjct: 81 RVFGKDAAACLESVCTADILGTPNGSGTLTVFTTEQGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRDS----LIDKLLFYKLRSN-VIIE-IQPINGVVLSWNQEHTFSN-------------- 112
++ + + + +K + V IE + P + +++
Sbjct: 141 MKEQDTGIMSEAVNKFKSQGKDVTIEFLTPSDQSLVAVQGPQVAKELAKLLEKNVSLDEV 200
Query: 113 ---SSFIDERFSIADVLLHR------------------------TWGHNEKIASDIKTYH 145
SF+ I DV + R + +
Sbjct: 201 YFMQSFVTTLAGIPDVRITRCGYTGEDGVEISVKSSQVENLTECLLESGSLKLAGLGARD 260
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP 204
LR+ G+ +D + P +A + L + G + + R+R
Sbjct: 261 SLRLEAGLCLYGSDI-DAKTTPVEAALAWLVAKRRRTAQDFPGANTIIGQLKTGVSRRRV 319
Query: 205 -MIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258
+ + G P +G I + ++G + K +A+ + +L
Sbjct: 320 GLQMLGQKPPPARAGVAIFSQGQQVGQVTSGCPSPSAGKNIAMGYV---------AESLK 370
Query: 259 VHGVRVKASF 268
G +V+
Sbjct: 371 APGTKVELKI 380
>gi|73543011|ref|YP_297531.1| glycine cleavage system aminomethyltransferase T [Ralstonia
eutropha JMP134]
gi|123623801|sp|Q46VZ7|GCST_RALEJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|72120424|gb|AAZ62687.1| Glycine cleavage system T protein [Ralstonia eutropha JMP134]
Length = 375
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G + FL+ ++ +V L A S +L +G ++ ++ ED F
Sbjct: 51 SHMCVVDLNGANTRAFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRF 110
Query: 66 ILEIDRSKR 74
L ++ S
Sbjct: 111 RLVVNASTA 119
>gi|209546029|ref|YP_002277919.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209538886|gb|ACI58819.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 377
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/314 (16%), Positives = 100/314 (31%), Gaps = 73/314 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+ + G AI L A+ T D+ + + + +L +G ++ + + ++L
Sbjct: 59 VHLVGPHAIAVLDAMTTRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNAWMLVHGS 118
Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
D L +D L Y + I +
Sbjct: 119 GSGHEEIVRQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ +
Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + D ++G + + KK++AIAR+D VD A+
Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 343
Query: 254 GMALTVHGVRVKAS 267
G L V G VKAS
Sbjct: 344 GTKLEVRGKTVKAS 357
>gi|91792194|ref|YP_561845.1| glycine cleavage system aminomethyltransferase T [Shewanella
denitrificans OS217]
gi|123166418|sp|Q12R04|GCST_SHEDO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|91714196|gb|ABE54122.1| glycine cleavage system T protein [Shewanella denitrificans OS217]
Length = 364
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVTGQDARDFLRKLLANDVAKLTVPGKALYGGMLDDNAGVIDDLITYYLSDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++ + R+ + + +V I +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSAPFSVTITERPELAMIAVQGPNAKAKAATVFTP 162
>gi|145219266|ref|YP_001129975.1| aminomethyltransferase [Prosthecochloris vibrioformis DSM 265]
gi|189039315|sp|A4SDB4|GCST_PROVI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|145205430|gb|ABP36473.1| aminomethyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 365
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 48/277 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G+ A+ FLQ++ T D+ A+ + +L G I+ +I +I+ TF
Sbjct: 49 SHMGNFYVKGRRALEFLQSVTTNDLSRTVDGQAQYTIMLYENGGIVDDLIIYRIDSVTFF 108
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------ 119
L ++ D L + V + +++ FS S +
Sbjct: 109 LIVNAGNCDKDFAWLEEHAGAFEGVQLSNHSDQLSLIALQGPKAFSILSRVIPEIDADRL 168
Query: 120 ---------FSIADVLLHRTWGHNEK---------------------------IASDIKT 143
F A++++ RT E + +
Sbjct: 169 PSFHFRQLPFMGAELMVARTGYTGEAGVEICLPNALAQPLWEALLDAGREDGLVPVGLGA 228
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G + P +A + + +S+ KG +IG+E +++
Sbjct: 229 RDTLRLEMGYSLYGHEI-DQDTNPLEARLKWV--VSMEKGPFIGREACRQVELDPRFGVA 285
Query: 204 PMIITGTDDLPPSGSPILTDDI-EIGTLGVVVGKKAL 239
+ G L G + D EIG + L
Sbjct: 286 GFSLEGR-ALARQGCRVFNADRQEIGKVCSGTISPTL 321
>gi|159471752|ref|XP_001694020.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277187|gb|EDP02956.1| predicted protein [Chlamydomonas reinhardtii]
Length = 404
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 13/98 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S ++V G + L T D L + +T G+ L + + + +
Sbjct: 111 SHWSRLRVSGDDRLTLLHNQSTQDFKALRPGQGADTVFVTATGRCL-DLATALVLPSSVM 169
Query: 67 LEIDRSKRDS-----------LIDKLLFYKLR-SNVII 92
L + D L+++L R V +
Sbjct: 170 LMVAEGTSDEAARGARPAGAALLERLNKMIFRGDKVAV 207
>gi|302537058|ref|ZP_07289400.1| glycine cleavage system T protein [Streptomyces sp. C]
gi|302445953|gb|EFL17769.1| glycine cleavage system T protein [Streptomyces sp. C]
Length = 371
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 105/305 (34%), Gaps = 55/305 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G A+ L A++ + T+ AR + I G IL ++ ++ E+
Sbjct: 52 LSHMGEITLTGPEAVKALDYALVGN-ISTVGVGRARYTHICQEDGGILDDLIVYRLGENE 110
Query: 65 FILEIDRSKRDSLIDKLLFYK------LR----SNVIIEIQ--------------PINGV 100
+++ + S ++D L +R + +I +Q ++G+
Sbjct: 111 YMVVANASNAQVVLDALTERAAGFDTEVRDDRDAYALIAVQGPESPGILKSLTDADLDGL 170
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
T + + R + E + + +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPEHAVELWQALTAAGEGAGLVPAGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199
LR+ G+ + + + P DA + + + K G ++G+ E + +
Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALEAAAEVAATKP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
RK ++ +P +G P++ IG + L A+A +D +HA
Sbjct: 288 PRKLVGLVAEGRRVPRAGFPVVAGGEVIGEVTSGAPSPTLGKPIAMAYVD-AEHAAPGTS 346
Query: 256 ALTVH 260
+ V
Sbjct: 347 GVGVD 351
>gi|291515244|emb|CBK64454.1| aminomethyltransferase [Alistipes shahii WAL 8301]
Length = 366
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ LQ I T DV L + + + +G I+ L+ +++ +T++
Sbjct: 49 SHMGEIWVKGPRALDLLQRITTNDVSKLFDGKVQYTCMPNGRGGIVDDILVYRVDAETYM 108
Query: 67 LEIDRSKRDSLIDKL 81
L ++ + D +
Sbjct: 109 LCVNAANIDKDWKHI 123
>gi|28198080|ref|NP_778394.1| glycine cleavage system aminomethyltransferase T [Xylella
fastidiosa Temecula1]
gi|182680707|ref|YP_001828867.1| glycine cleavage system aminomethyltransferase T [Xylella
fastidiosa M23]
gi|31340112|sp|Q87EZ6|GCST_XYLFT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238691061|sp|B2I6Q1|GCST_XYLF2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|28056140|gb|AAO28043.1| aminomethyltransferase [Xylella fastidiosa Temecula1]
gi|182630817|gb|ACB91593.1| glycine cleavage system T protein [Xylella fastidiosa M23]
Length = 368
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
++ + R+ + + NV +E + ++ ++ + E
Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169
Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146
RF+ +V H RT E I ++
Sbjct: 170 KLGRFAALEVASHSKKPLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT E G + KA+ AR+ + + +
Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345
Query: 261 GVRVKASF 268
+ V+
Sbjct: 346 EIPVRVVK 353
>gi|326332985|ref|ZP_08199242.1| putative N,N-dimethylglycine oxidase [Nocardioidaceae bacterium
Broad-1]
gi|325949343|gb|EGD41426.1| putative N,N-dimethylglycine oxidase [Nocardioidaceae bacterium
Broad-1]
Length = 834
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 54/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A LQ + T DV + L QG I ++++E++ F + +
Sbjct: 516 LEVSGPGAEALLQRLTTGDVSK-KPGAVTYTLFLDEQGGIKSDITVARLEDEVFQVGANG 574
Query: 72 SKRDSLIDKLLFYKLR-------------------------------SNVIIEIQPINGV 100
+ + + KLR + V + +G+
Sbjct: 575 PVDLAYLRREAR-KLRAEDPALAAHVRDITGGTCCIGLWGPLARDLIAEVSADDFTNDGL 633
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
+ T R S L + E IA+
Sbjct: 634 KYFRGKRATIGGIPVTALRLSYVGELGWEIYASAENGQKLWDVLWEAGQEHGVIAAGRAA 693
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202
+ LR+ G D P++A + + K ++G+ + R + R
Sbjct: 694 FGALRLEKGYRSWGADMTTEHD-PYEAGVGF--AVKTAKEDFVGKAALEGRSVETSARRL 750
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + I + P+L+ + +G +
Sbjct: 751 RCLTIDDGKSMVLGKEPVLSGETSVGYVTSAA 782
>gi|15963857|ref|NP_384210.1| putative aminomethyltransferase protein [Sinorhizobium meliloti
1021]
gi|307309558|ref|ZP_07589213.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti BL225C]
gi|307320390|ref|ZP_07599807.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti AK83]
gi|15073032|emb|CAC41491.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021]
gi|306893956|gb|EFN24725.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti AK83]
gi|306900018|gb|EFN30639.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti BL225C]
Length = 789
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 88/296 (29%), Gaps = 58/296 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYEHGGMIDDGTLFRLGDK 516
Query: 64 TF-ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE-HTFSNSSFIDERFS 121
F + D L ++ R+ V ++ + + + + R
Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFRAWVRSSTDQMHNIAVQGPKSRDILKEIVWTAPRQP 576
Query: 122 IADVL----------------------------------------------LHRTWGHNE 135
L + R +
Sbjct: 577 TIGELEWFRFAVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWRAGEPHG 636
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
++ +RI G++ + DF T P +A + + +IG+E + R
Sbjct: 637 LRPMGLEALDMVRIEAGLIFAHYDFDDQTD-PFEAGIGFTVPLKSKHDDFIGREALIR-- 693
Query: 196 HRNIIRKRPMIIT--GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
R + M+ ++ G + +IG + K +A+ARID
Sbjct: 694 -RKENPRHLMVGLDIQANEAVGHGDCVHVGRAQIGVITSATRSPVLGKTIALARID 748
>gi|229820406|ref|YP_002881932.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333]
gi|229566319|gb|ACQ80170.1| glycine cleavage system T protein [Beutenbergia cavernae DSM 12333]
Length = 381
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 46/272 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + I+V G +A L A + + V L AR + +L P G +L ++ ++ D F
Sbjct: 57 LSHMAQIEVTGPAAAAGLDASVVSRVAALEVGRARYTMLLAPDGGVLDDVIVYRLAADDF 116
Query: 66 ILEIDRSKRDSLIDKLL------------FYKLRSNV----------------------- 90
++ + + R +++D L RS V
Sbjct: 117 LVVANAANRLTVLDALTARCPGTGVAVTDRTTQRSLVALQGPVAERVLGTLTDTDVTALR 176
Query: 91 --IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK----IASDIKTY 144
I + GV + F + + V + R I +
Sbjct: 177 YYTIAAATVAGVPALLARTGYTGEDGFEVSVPASSAVSVWRALLEAGAAEGVIPCGLAAR 236
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ + +T P +A + + + + ++G+ + R + R R
Sbjct: 237 DSLRLEAGMPLYGHEI-DATTTPFEAGLGRIVHLDPDRE-FVGRAALERRRDEPGAR-RL 293
Query: 205 MIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV 234
+ + G +G P+L D +GT+ V
Sbjct: 294 VGLAGEGRRAARAGYPVLDADGATVGTVTSGV 325
>gi|237713459|ref|ZP_04543940.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
D1]
gi|262407245|ref|ZP_06083793.1| glycine cleavage system T protein [Bacteroides sp. 2_1_22]
gi|294647320|ref|ZP_06724913.1| aminomethyltransferase [Bacteroides ovatus SD CC 2a]
gi|294809058|ref|ZP_06767780.1| aminomethyltransferase [Bacteroides xylanisolvens SD CC 1b]
gi|229446441|gb|EEO52232.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
D1]
gi|262354053|gb|EEZ03145.1| glycine cleavage system T protein [Bacteroides sp. 2_1_22]
gi|292637279|gb|EFF55704.1| aminomethyltransferase [Bacteroides ovatus SD CC 2a]
gi|294443783|gb|EFG12528.1| aminomethyltransferase [Bacteroides xylanisolvens SD CC 1b]
Length = 361
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71
V G A+ FLQ I + +V L + + +G I+ L+ + E + ++L ++
Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEEGGIVDDLLVYQYEPEKYMLVVNAAN 115
Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ ++ D + ++ ++ +Q + + L+ +TF +F
Sbjct: 116 MEKDWNWCVSHNTEGAELENSSDNIAQLAVQGPKAVLALQKLTDIDLASIPYYTFKVGTF 175
Query: 116 IDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------HELRINHG 152
E I + G E + + Y LR+ G
Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPSVADRIWKAVFEAGEEYGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K +I + ++ + + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKD-FINRPLLEKQKTEGVTRKLVGFEMVDRG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G ++ + ++G + + + + + + + ++
Sbjct: 294 IPRHGYELVNAEGEQVGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|283835329|ref|ZP_06355070.1| glycine cleavage system T protein [Citrobacter youngae ATCC 29220]
gi|291068491|gb|EFE06600.1| glycine cleavage system T protein [Citrobacter youngae ATCC 29220]
Length = 364
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + + I ++ ++ + + F DE+ +
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTDEQRHATE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAAAFWRALVQAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN----------- 198
G+ + I P +A M +IG+E + + +
Sbjct: 230 EAGMNLYGQEMDEG-ISPLEANMGWTIAWEPADRDFIGREALEMQREKGHEQLVGLVMTE 288
Query: 199 -IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 289 KGVLRNELPVRFTDTSGNQHEGIITSGTFSPTLG-----YSIALARV-PAGIGETAIVQI 342
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 343 RNREMPVKVTKP 354
>gi|160887359|ref|ZP_02068362.1| hypothetical protein BACOVA_05378 [Bacteroides ovatus ATCC 8483]
gi|237722659|ref|ZP_04553140.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
2_2_4]
gi|298482664|ref|ZP_07000848.1| glycine cleavage system T protein [Bacteroides sp. D22]
gi|299148936|ref|ZP_07041998.1| glycine cleavage system T protein [Bacteroides sp. 3_1_23]
gi|156107770|gb|EDO09515.1| hypothetical protein BACOVA_05378 [Bacteroides ovatus ATCC 8483]
gi|229448469|gb|EEO54260.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
2_2_4]
gi|295087137|emb|CBK68660.1| aminomethyltransferase [Bacteroides xylanisolvens XB1A]
gi|298271127|gb|EFI12704.1| glycine cleavage system T protein [Bacteroides sp. D22]
gi|298513697|gb|EFI37584.1| glycine cleavage system T protein [Bacteroides sp. 3_1_23]
Length = 361
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ I + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPQALAFLQKITSNNVAALAPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYMLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 ME 117
>gi|297182876|gb|ADI19027.1| glycine cleavage system t protein (aminomethyltransferase)
[uncultured alpha proteobacterium HF0070_05I22]
Length = 403
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 64/283 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F + D+ + + L G I+ ++ ++ ED F +
Sbjct: 83 VEISGPDAKSFANLVFARDLSRVAVGRCLYNFALYHNGNIITDGIMLRLAEDKFWMV--- 139
Query: 72 SKRD-SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH-------TFSNSSFIDE----- 118
+ D L + + +V I V +S Q + F D
Sbjct: 140 -QADGELFKWYMAHAHHFDVTIS---DPNVWVSQIQGPRSMDVLRGAIDGEFPDPWRYFD 195
Query: 119 --------------------------------RFSIADVLLHRTWGHNEKIASDIKTYHE 146
L+ + + I + +
Sbjct: 196 VATVSIAGENVIITRTGFSNELGWEFYLRPENNAEKVGNLIWKVGRKHGMILTSTPVFRA 255
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI G++ +F T P +A + + + K +IG+ + + R R
Sbjct: 256 RRIEAGLL-TQAEFDIETT-PFEAGLGHF--MEMEKENFIGKAALEKAD----KRSRTFG 307
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARID 245
+ + G IL D+ +G + +A+ R+D
Sbjct: 308 MRIRGGIANRGRTILIDNDFVGRVCSSAWSPFQECGVALVRMD 350
>gi|297180096|gb|ADI16320.1| glycine cleavage system t protein (aminomethyltransferase)
[uncultured bacterium HF0070_11A08]
Length = 388
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/298 (17%), Positives = 107/298 (35%), Gaps = 60/298 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G+ A+PFL+ +++ + T+ + TP G I + ++ K+ + F
Sbjct: 74 IEISGRDAVPFLEKVLSRRISTMEEGRGYYALACTPSGGIFMDGVVFKLGTNRFWYVQAD 133
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----FSNSSFIDE--------- 118
++ + L + +V I+ P + V+ ++ IDE
Sbjct: 134 GPFETWLMALS---VGFDVEIK-DPKSRVLQIQGPASIAIMNAASGGAIDETMRYFRSGY 189
Query: 119 -----------RFSIADVLLHRTWGHNEKIASDIKTYHEL-------------------- 147
R + L + EK + + L
Sbjct: 190 FDLGGQSLYVSRTGFTNELGFEIYCDGEKTNH-LALWDHLMASGEPHGMEFSSTRALTIR 248
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI GI+ TD +++ P +A + + L K +IG++ + R++ +
Sbjct: 249 RIEGGILGNTTDM-DASMTPFEAGLGAF--VDLEKDDFIGRDALIDADRRSL----LFGL 301
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHG 261
T ++ P SGS IL + +G + V + AR + + + MAL +
Sbjct: 302 TCSEATPSSGSEILDGQVVVGHITAGVPSPTLGLGIGYARFAEPGEWVCRAMALRLPD 359
>gi|254000172|ref|YP_003052235.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. SIP3-4]
gi|253986851|gb|ACT51708.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. SIP3-4]
Length = 371
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 82/272 (30%), Gaps = 47/272 (17%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+KV G A + ++ D+ L + +A + G + ++ + F L
Sbjct: 57 IVKVSGPDAEAVIDQLVARDITKLEPGCSLLAAEVDETGALCDDIMVIRDSATDFRLSHG 116
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQ-----------------------PINGVVLSWNQE 107
K + L K +V +E + G+ +
Sbjct: 117 SGKTPEQLKLLSAGK---SVKVEPDLDVHILSLQGPLSLDILAPHLSFDLAGLPYFRHVP 173
Query: 108 HTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRIN 150
+ + R + + + I + + RI
Sbjct: 174 TVLFGKNIVIARGGYSGERGYEVYCTAADAVFLWDKILEVGAPFGAIPASWNSLELTRIE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISL-TKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
++ + P + M G+ L KG YIG+ V +++ R +R +I
Sbjct: 234 AALLFFPFEMPEGDTTPWEVNMGW--GVDLDKKGDYIGKAAVLKLKGRERVRH-VGLICR 290
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ +G+ + D EIG + + L +
Sbjct: 291 SASAMEAGAKLFKDGKEIGVITSASYSRYLML 322
>gi|163756054|ref|ZP_02163170.1| aminomethyltransferase [Kordia algicida OT-1]
gi|161323928|gb|EDP95261.1| aminomethyltransferase [Kordia algicida OT-1]
Length = 360
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 100/315 (31%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + T D L A+ S + G I+ +I ++ E+ +I
Sbjct: 49 SHMGEFVISGPNALALIQKVTTNDASKLKDGKAQYSCMPNNDGGIVDDLIIYRVNEEKYI 108
Query: 67 LEIDRSKRDSLIDKLLF--------------YKLRS----NVIIEIQPINGVVLSWNQEH 108
L ++ S + + + Y L + + +Q + V L+ + +
Sbjct: 109 LVVNASNIEKDWNWISSHNDVGAEMRDVSDEYSLLAIQGPKAVEAMQSLTEVDLTNIKYY 168
Query: 109 TFSNSSFIDERFSIADVLLHRTWG------HNEKIAS-----------------DIKTYH 145
TF + F I + G NE +A +
Sbjct: 169 TFQIAKFAGVENVIVSATGYTGSGGFEIYCKNEDVAEVWEKVFEAGESFGIKPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK ++ +E + + RK
Sbjct: 229 TLRLEMGYCLYGNDI-DETTSPIEAGLGWI--TKFTKD-FVNREQIEDQKRLGTTRKLVA 284
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G I+ ++G + L D+ + +
Sbjct: 285 FEMQDRGIPRQGYDIVDGNGNKLGMVTSGTMSPSMRIGIGLGYVPTVFADYGSNIYIQIR 344
Query: 259 VHGVRVKASFPHWYK 273
+ V K +YK
Sbjct: 345 KNRVPAKVVKLPFYK 359
>gi|89893125|ref|YP_516612.1| hypothetical protein DSY0379 [Desulfitobacterium hafniense Y51]
gi|89332573|dbj|BAE82168.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 469
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
V G A+ FL +I D L K R + I QG++L ++ +I ED +
Sbjct: 76 VVGPDAVKFLNSICVNDFTNLTTKGLRHAVICNDQGQVLTDGVVIRIGEDRY 127
>gi|15836788|ref|NP_297476.1| glycine cleavage system aminomethyltransferase T [Xylella
fastidiosa 9a5c]
gi|11132409|sp|Q9PGW5|GCST_XYLFA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|9104982|gb|AAF82996.1|AE003872_7 glycine cleavage T protein [Xylella fastidiosa 9a5c]
Length = 368
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
++ + R+ + + NV +E + ++ ++ + E
Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169
Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146
RF+ +V H RT E I ++
Sbjct: 170 KLGRFAALEVASHSKKILFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT E G + KA+ AR+ + + +
Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345
Query: 261 GVRVKASF 268
+ V+
Sbjct: 346 EIPVRVVR 353
>gi|219666388|ref|YP_002456823.1| glycine cleavage T protein (aminomethyl transferase)
[Desulfitobacterium hafniense DCB-2]
gi|219536648|gb|ACL18387.1| glycine cleavage T protein (aminomethyl transferase)
[Desulfitobacterium hafniense DCB-2]
Length = 469
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
V G A+ FL +I D L K R + I QG++L ++ +I ED +
Sbjct: 76 VVGPDAVKFLNSICVNDFTNLTTKGLRHAVICNDQGQVLTDGVVIRIGEDRY 127
>gi|86360680|ref|YP_472568.1| aminomethyltransferase protein [Rhizobium etli CFN 42]
gi|86284782|gb|ABC93841.1| probable aminomethyltransferase protein [Rhizobium etli CFN 42]
Length = 789
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 97/297 (32%), Gaps = 56/297 (18%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + LS +V G A LQ +T DV L SA+ G ++ + ++
Sbjct: 455 AIIDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMMDDGTLFRLG 514
Query: 62 E-----------DTFILEIDRSKR------DSLIDKLLFYKL---RSNVIIE-------- 93
+ L K+ S D+L L RS I++
Sbjct: 515 DKNFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQLHNIALQGPRSRDILKGIIWTAPR 574
Query: 94 ---IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139
I + + + F + + R L + + H + +
Sbjct: 575 QPAIGELEWFRFTVGRMGGFEGAPVVISRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +RI G++ + +F T P +A + + + +IG+E + R
Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693
Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ R + + ++ G I ++G + K +A+ARID
Sbjct: 694 --RKEHPRHLLVGLDIKANESVGHGDCIHIGRAQVGVVTSATRSPVLGKTIALARID 748
>gi|150397399|ref|YP_001327866.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
gi|150028914|gb|ABR61031.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
Length = 815
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 55/316 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++ G+ A +L +IT V + +G+IL + IEED F
Sbjct: 496 LPGFSRFRLKGEGAREWLSGLITGRVPK--PGRIGLAYFADSKGRILTEMSVMAIEEDFF 553
Query: 66 ILEIDRSKRDSLIDKLLFYK-LRSNVIIEI-----------QPINGVVLSWNQEHTFSNS 113
L + + + L ++ + + ++ P + +L+ + +
Sbjct: 554 FLITAATAQWHDFEWLRKHRPVDAAFTLDDVTANFSCQILTGPKSRAILAEVCDADLAKG 613
Query: 114 SFIDE------------RFSIADVLLHRTWGHNEKIAS-----------------DIKTY 144
+ R S A L + + ++
Sbjct: 614 WLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKIDDTPAIFDAVWEAGQKHGLRPFGMEAL 673
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LRI G D ++ + +K + G+ + R + + + R+
Sbjct: 674 DSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWSKPDFKGKAALEREKQQGVTRRFV 730
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMAL 257
+ + P S + + +G AL + R D + + +
Sbjct: 731 TLTVEAEACDAPYMSTLWSGGEVVGETTSGNWGYRTGRSIALGMLRADLAVPGREVEVEI 790
Query: 258 TVH--GVRVKASFPHW 271
V+ P W
Sbjct: 791 FGDRFKAVVQPDQPLW 806
>gi|114331928|ref|YP_748150.1| glycine cleavage system aminomethyltransferase T [Nitrosomonas
eutropha C91]
gi|122313350|sp|Q0AEP7|GCST_NITEC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|114308942|gb|ABI60185.1| aminomethyltransferase [Nitrosomonas eutropha C91]
Length = 363
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G++ FL+ ++ ++ L A + +L P G I+ +I + E F L ++
Sbjct: 55 VDLHGENVRQFLRGLVANNIDKLTVPGKALYTCMLNPAGGIIDDLIIYFLSESWFRLVVN 114
Query: 71 RSKRDSLIDKLLF 83
D ID +
Sbjct: 115 AGTADKDIDWITL 127
>gi|54293079|ref|YP_125494.1| glycine cleavage system aminomethyltransferase T [Legionella
pneumophila str. Lens]
gi|61213294|sp|Q5X0A4|GCST_LEGPL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|53752911|emb|CAH14347.1| hypothetical protein lpl0117 [Legionella pneumophila str. Lens]
gi|307608862|emb|CBW98260.1| hypothetical protein LPW_01181 [Legionella pneumophila 130b]
Length = 360
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 53/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV + + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWNQEHTFSNSSFIDE-- 118
+ ++ + R + + + R+ V ++ + ++ S +
Sbjct: 110 RVVLNSATRQNDVAWI-----RAKSEGFAVGLQERRELSMLAVQGPNAIAKTLSILAPAH 164
Query: 119 --------RFSIADV--------------------------LLHRTWGHNEKIASDIKTY 144
F DV L + +
Sbjct: 165 VDAVSTLTPFECVDVDHWFFARTGYTGEDGLEIIVPNEFVTQLWNDLLNAGVTPCGLGAR 224
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G++ D T P ++ + +IG + + + I RK
Sbjct: 225 DTLRLEAGMLLYGQDM-DETTTPLESGLTWTVKWEPEDRGFIGMGALVSQKQQGIKRKMV 283
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVH 260
+ + G ++ + G + +++A+AR+ V+ + + +
Sbjct: 284 GLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARV-PVETGEQVLVDIRGK 342
Query: 261 GVRVKASFPHWYK 273
+ K P + K
Sbjct: 343 LIPAKVGKPRFIK 355
>gi|166368635|ref|YP_001660908.1| glycine cleavage system aminomethyltransferase T [Microcystis
aeruginosa NIES-843]
gi|166091008|dbj|BAG05716.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
Length = 368
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 100/307 (32%), Gaps = 51/307 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + + LQ ++ +++ L A+ S +L P G I+ + E +
Sbjct: 58 SHMGKFILTGDNLVQSLQTLVPSNLARLSAGKAQYSVLLNPDGGIIDDIIFYYQSESQGV 117
Query: 67 LEIDRSKRDS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-SSFIDERF- 120
L ++ S D ++ L S V ++ V+++ + S + E+
Sbjct: 118 LIVNASTTDKDREWILGNLEG----SGVKLKDLSQERVLIALQGPKAATILQSLVGEKLS 173
Query: 121 -----------------------------------SIADVLLHRTWGHNEKIASDIKTYH 145
L + + +
Sbjct: 174 DFGLFNHWESQLFGEKVFIARTGYTGEDGFEIMAPPEIGQRLWTEFLNLGVTPCGLGARD 233
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + D ST P +A ++ L + KG +IG+ V+ + + R+
Sbjct: 234 TLRLEAALALYGQDIDDSTS-PLEAGLNWLVHLP-EKGDFIGRNVLEDQKLNGVNRRLVG 291
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+ + P++ +G + A+A+A + AI + + + + G
Sbjct: 292 LQMSGKHIARHDYPVVFAGEVVGKVTSGTLSPTLNTAIALAYLPTPFAAIGQAIEVEIRG 351
Query: 262 VRVKASF 268
A+
Sbjct: 352 TTYPATV 358
>gi|308808814|ref|XP_003081717.1| unnamed protein product [Ostreococcus tauri]
gi|116060183|emb|CAL56242.1| unnamed protein product [Ostreococcus tauri]
Length = 421
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 48/267 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK A FL++++ AD+ L S + +G I+ +I+KI + + + ++
Sbjct: 102 SIRGKDATAFLESLVVADLKGLKNGTGTLSVMTNEKGGIIDDTVITKINDHDYYVVLNAG 161
Query: 73 KRDSLIDKLLFYKLRSNV----------------------------IIEIQPINGVVLSW 104
+ + + ++ ++ +
Sbjct: 162 CAEKDQKHINAHLAKAKANGMDVDFIVHSNRSLLAFQGPKTMEVLQRFTDFDLSKLYFGM 221
Query: 105 NQEHTFSNSSFIDERFSIADV--------------LLHRTWGHNEKIASDIKTYHELRIN 150
E T + R L G E + + LR+
Sbjct: 222 FTEMTVNGGKVWVTRTGYTGEDGFEISVPNEDAVKLAEALEGQPEVRFAALGPRDSLRLE 281
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR-IQHRNIIRKRPMIIT 208
G+ D I P +A + G + + C ++G E++ + +++ I +R + +T
Sbjct: 282 AGLCLYGNDL-NEDITPPEAGLTWTIGKARREKCDFVGGEIIKKQLENPASIPQRRVGLT 340
Query: 209 GTDDLPPSGSP---ILTDDIEIGTLGV 232
T P+ + D IG +
Sbjct: 341 FTGKGAPARQHSIILDMDGNTIGEVTS 367
>gi|255326831|ref|ZP_05367907.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296]
gi|255296048|gb|EET75389.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296]
Length = 372
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 103/289 (35%), Gaps = 62/289 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ +V G A FL A+++ + L A+ S ++ +G ++ + ++ ++
Sbjct: 50 LSHMGEFRVTGPDAGAFLDYALVSN-MSILKVGKAKYSILVNDKGGVIDDLITYRLGDEE 108
Query: 65 FILEIDRSKRD----------------------------------------------SLI 78
F++ + S D +
Sbjct: 109 FMVVPNASNIDTDFAAMSERLGDFNVEFVNESEQTSLVAVQGPRAEEILLAAGVSDEEAV 168
Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-- 136
+L +Y ++V + + ++ ++ F+ ++ L + E
Sbjct: 169 RELKYY---ASVPLTVAGVDVLLARTGYTGEDGFELFVPNENAV--ELWDKLAAAGEPFG 223
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSR 193
I + + + LR+ G+ + I P ++ + L I+L K ++G+E ++
Sbjct: 224 MIPAGLASRDSLRLEAGMPLYGHELGLE-ITPFESGLGRLVEIALEKKAADFVGREALTE 282
Query: 194 IQHRNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVVGKKALA 240
+ ++ ++ + + P +GS ++ + EIG + + L
Sbjct: 283 L-AKSESKRILVGLKAQAKRPARAGSKLVDAEGNEIGEVTSGIPSPTLG 330
>gi|229269505|ref|YP_136128.2| glycine cleavage system aminomethyltransferase T [Haloarcula
marismortui ATCC 43049]
gi|59797656|sp|Q5V230|GCST_HALMA RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
Length = 363
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63
S+ I V G A Q + T DV L A+ AI G +L ++ ++ E D
Sbjct: 51 SHMGQITVAGPDAATLTQRLTTNDVTVLDPGEAQYGAITDEDGIMLDDTVVYRLPEGAAD 110
Query: 64 TFI 66
F+
Sbjct: 111 EFL 113
>gi|55231003|gb|AAV46422.1| probable aminomethyltransferase [Haloarcula marismortui ATCC 43049]
Length = 384
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---D 63
S+ I V G A Q + T DV L A+ AI G +L ++ ++ E D
Sbjct: 72 SHMGQITVAGPDAATLTQRLTTNDVTVLDPGEAQYGAITDEDGIMLDDTVVYRLPEGAAD 131
Query: 64 TFI 66
F+
Sbjct: 132 EFL 134
>gi|328543569|ref|YP_004303678.1| sarcosine oxidase alpha subunit transmembrane protein [polymorphum
gilvum SL003B-26A1]
gi|326413313|gb|ADZ70376.1| Putative sarcosine oxidase alpha subunit transmembrane protein
[Polymorphum gilvum SL003B-26A1]
Length = 1006
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/325 (14%), Positives = 90/325 (27%), Gaps = 65/325 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL+ + T L R + +L G ++ ++ ++ +D F
Sbjct: 673 STLGKIEVVGPDAATFLERMYTNPFKGLKPGRCRYALMLNEAGFVIDDGVVGRLADDRFH 732
Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106
+ + + Y+ +V I V++
Sbjct: 733 VTTTTGGAARVFAAMEDYRQTEWPDLDVWITSTTEQWAVIAVQGPLARETIAPFVAGIDL 792
Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146
+ S RFS L R E +
Sbjct: 793 APDALPHMSVAAGRFSGLPCRLFRVSFTGELGFEVNVPARHGAAVWDALCHAAERRGGCA 852
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G + + T+ P D ++ I K ++G+ ++R
Sbjct: 853 YGTEAMHVLRAEKGYIIVGQE-TDGTVTPADLGLEW--AIGKAKPDFVGKRSLARPDLAA 909
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIEI------GTLGVVV------GKKALAIARI 244
RK+ + + D G+ + + G + ALA+
Sbjct: 910 AGRKQLVGLLTEDPARVLEEGAQVTLEAEPARGTPARGHVTSAYWSPAAGRSIALALVED 969
Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269
+ + + +RV+ P
Sbjct: 970 GRARTGETLHVPMPAGALRVRVVEP 994
>gi|254461511|ref|ZP_05074927.1| glycine cleavage system T protein [Rhodobacterales bacterium
HTCC2083]
gi|206678100|gb|EDZ42587.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 371
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/317 (14%), Positives = 94/317 (29%), Gaps = 63/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +KV G A L+ +I D+ L R + QG I+ +++ D
Sbjct: 53 SHMGQVKVSGAMAAAALETLIPVDIEGLAENRQRYGMLTNEQGGIMDDLMLANRG-DHIF 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----NGVVLSWNQEHTFSNSSFIDERFS 121
+ ++ + + + I + +E + I + +L+ + + S +D R +
Sbjct: 112 VVVNAACKGADIAHM-------KAHLEPEVIVTEIADRALLALQGPASEAVLSTLDPRAA 164
Query: 122 IADVLLHRTW-------------------------------------GHNEKIASDIKTY 144
+ T H + A +
Sbjct: 165 DMTFMDVATLDLNGAECWVSRSGYTGEDGYEISVPNADAVALAEALLAHEDVEAIGLGAR 224
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D ST AL + + + G + G +++S
Sbjct: 225 DSLRLEGGLCLYGHDIDTSTTPVEGALTWAIQKVRRSGNARAGGFPGADIISVQMENGAP 284
Query: 201 RKRPMIITGTDDLPPSGSPILT---DDIEIGTLGV------VVGKKALAIARIDKVDHAI 251
RKR ++ G + IGT+ V G A+ + D
Sbjct: 285 RKRVGLLPEGRAPMREGVELFATSEGGTSIGTITSGGFGPTVAGPVAMGLISADHSKLGA 344
Query: 252 KKGMALTVHGVRVKASF 268
L + + +
Sbjct: 345 TIYGELRGKRLPLTITK 361
>gi|88812452|ref|ZP_01127701.1| aminomethyltransferase [Nitrococcus mobilis Nb-231]
gi|88790238|gb|EAR21356.1| aminomethyltransferase [Nitrococcus mobilis Nb-231]
Length = 361
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + +++ G A L+ ++ DV L A + +L QG +L ++ + E +
Sbjct: 50 SHMAIVEITGARAQECLRHLLANDVAKLKEPGKALYTCLLNEQGGVLDDLIVYYLAEGRY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
++ + RD + + R V +E + ++ +
Sbjct: 110 RTVVNAATRDKDLSWIKIQGERFQVQVEYRADLAMLAVQGPQA 152
>gi|282900933|ref|ZP_06308866.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194024|gb|EFA68988.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii
CS-505]
Length = 383
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 100/319 (31%), Gaps = 76/319 (23%)
Query: 21 PF-LQA---------IITADVLTLPYKIARGSAILTPQ-------------GKILLYFLI 57
F LQ ++ +D+ L ++ + +L PQ GK
Sbjct: 68 KFNLQGKNLMAQLEKLVPSDLRRLQPGQSQYTVLLNPQGGIIDDIIIYRQSGK------- 120
Query: 58 SKIEEDTFILEIDRSKRDSLIDKL---------LFYKL-RSNVIIEIQPINGVVL----S 103
+ + ++ ++ S D + L F L R ++I +Q +
Sbjct: 121 -NTDNEKVVIIVNASTTDKDRNWLSQNLDLNQIQFEDLSRDKILIALQGPKATAILQSFV 179
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY------------ 144
+ ++ L RT E + ++ +
Sbjct: 180 ADDLTPIKAFGHLETEILGGVAFLARTGYTGEDGFEIMVDSQTGLEFWQRLHGAGVTPCG 239
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ + D +T P +A + L + KG +IG++++ R + + +
Sbjct: 240 LGCRDTLRLEAAMSLYGQDIDDNTT-PLEAGLAWLVHLD-RKGDFIGRDILERQKIQGVE 297
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254
RK + T ++P G +L+ IG + ALA + + +
Sbjct: 298 RKLVGLQTQGRNIPRHGYSLLSSGKIIGQVTSGTLSPTLNYPIALAYVTAELANIKQQIE 357
Query: 255 MALTVHGVRVKASFPHWYK 273
+ + + +YK
Sbjct: 358 VDIRGKTYPAQVVKRPFYK 376
>gi|241666511|ref|YP_002984595.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861968|gb|ACS59633.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 789
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 100/312 (32%), Gaps = 62/312 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516
Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96
F + + ++ L K R II P
Sbjct: 517 NFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139
+ + + F + + R L + + H + +
Sbjct: 575 QPTIGELEWFRFTVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +RI G++ + +F T P +A + + + +IG+E + R
Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGREALIR 693
Query: 194 IQHRNIIRKRPMIITG-TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVD 248
+ R + + +++ G I ++G + K +A+ARID V
Sbjct: 694 --RKEHPRHLLVGLDIKSNEAVGHGDCIHIGRAQVGVVTSATRSPVLGKTIALARID-VM 750
Query: 249 HAIKKGMALTVH 260
HA G + V
Sbjct: 751 HA-NPGTEVEVG 761
>gi|313619092|gb|EFR90895.1| glycine cleavage system T protein [Listeria innocua FSL S4-378]
Length = 257
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 32/69 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + +LQ +++ D+ + A+ + + G + ++ K E +I
Sbjct: 52 SHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYI 111
Query: 67 LEIDRSKRD 75
L ++ + +
Sbjct: 112 LVVNAANTE 120
>gi|295097442|emb|CBK86532.1| aminomethyltransferase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 347
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDER 119
L ++ + R+ + + + + I ++ ++ + S F DE+
Sbjct: 93 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAASLFSDEQ 147
>gi|227833538|ref|YP_002835245.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
gi|262184528|ref|ZP_06043949.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
gi|254797869|sp|C3PHK3|GCST_CORA7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|227454554|gb|ACP33307.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
Length = 370
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 104/307 (33%), Gaps = 59/307 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A FL +++ TL A+ S I G I+ + ++EE F
Sbjct: 51 LSHMGEIWVNGPDAAEFLSYCFISNLTTLKEGKAKYSMICAEDGGIIDDLITYRLEETKF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS----------N 112
++ + D++ D L R+ +V ++ + + +++
Sbjct: 111 LVVPNAGNADTVWDALNE---RAEGFDVDLKNESRDVAMIAVQGPKALEILVPLVEDTKQ 167
Query: 113 SSFID-ERFSIADVLLHRTWGHN------------------------EKIASDIKTY--- 144
+ +D ++ + R + E++ + Y
Sbjct: 168 QAVMDLPYYAAMTGKVARKYAFICRTGYTGEDGFELIVYNSDAPELWEELLKAGEEYGIK 227
Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G+ + I P +A M + + ++G EV+ +
Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELTRD-ITPVEAGMSR--AFAKKEQDFVGAEVLRQRAEE 284
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+++ +GS + + ++GT+ L A+A ID ++
Sbjct: 285 GPQAVITGLVSSQRRAARAGSEVYVGENKVGTVTSGQPSPTLGHPVALALIDTAAG-LEP 343
Query: 254 GMALTVH 260
G A+ V
Sbjct: 344 GAAVEVD 350
>gi|254497300|ref|ZP_05110108.1| glycine cleavage system aminomethyltransferase T [Legionella
drancourtii LLAP12]
gi|254353528|gb|EET12255.1| glycine cleavage system aminomethyltransferase T [Legionella
drancourtii LLAP12]
Length = 360
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 105/304 (34%), Gaps = 43/304 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++T DV L + A S + G I+ ++ + D +
Sbjct: 50 SHMTIVDILGAGGRQFLRKLLTNDVDQLEHNGKALYSCMCNEHGGIIDDLIVYQRASDNY 109
Query: 66 ILEIDRSKRDS---------------LIDK--LLFYKLR-----SN--VIIEIQPINGVV 101
+ ++ + R++ L ++ L ++ S ++ I+ V
Sbjct: 110 RIILNSATRETDLVWIHQMSEGFAVGLQERTELAMIAVQGPNAISKTLAVLNPAQIDAVS 169
Query: 102 LSWN------QEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
N ++ F+ + + E V L + + LR+
Sbjct: 170 TLTNFECVDVEQWFFARTGYTGEEGFEIIVPQEQAVQLWTDLKNAGVHPCGLAARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G++ D ST P ++ + T +IG + + + + K +
Sbjct: 230 EAGMLLYGQDMDTSTS-PLESGLAWTIKWEPTDRNFIGMGALFSQKQQGLKHKLVGLTLM 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ +G ++ G + +++A+AR+ ++ + +A+ V K
Sbjct: 289 DKGIMRNGQRVVVAGYADGVITSGSYSPTLEQSIALARV-PLETGAEVLVAIRDKLVPAK 347
Query: 266 ASFP 269
P
Sbjct: 348 VGKP 351
>gi|254486836|ref|ZP_05100041.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101]
gi|214043705|gb|EEB84343.1| sarcosine oxidase, alpha subunit family [Roseobacter sp. GAI101]
Length = 1005
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + S I V G A FL + T + +L R + + G ++ ++++I
Sbjct: 666 MGLLDASTLGKIIVKGPDAGKFLDMLYTNMMSSLKPGKCRYGLMCSENGFLIDDGVVARI 725
Query: 61 EEDTFILEIDRSKRDSLIDKL 81
++DTF+ D + +
Sbjct: 726 DDDTFLCHTTTGGADRIHQHM 746
>gi|260599246|ref|YP_003211817.1| glycine cleavage system aminomethyltransferase T [Cronobacter
turicensis z3032]
gi|260218423|emb|CBA33523.1| Aminomethyltransferase [Cronobacter turicensis z3032]
Length = 365
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + V + ++ ++ ++
Sbjct: 110 RLVVNSATREKDLAWINEHAEPYGVSVTVRDDLSLIAVQGPNAKAKAATL 159
>gi|300789813|ref|YP_003770104.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32]
gi|299799327|gb|ADJ49702.1| sarcosine dehydrogenase [Amycolatopsis mediterranei U32]
Length = 683
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 98/274 (35%), Gaps = 55/274 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
+ V G A+PFLQA+ T+D+ P + +L G + ++++ ++ F +
Sbjct: 399 LAVTGPGALPFLQAMTTSDLAAAP-GTVTTTLLLGEDGGVRGRLTVARLGDERFHVGAGG 457
Query: 68 EIDRSKRDSLIDKLLFYKLRSN--VIIEIQ-----------PINGVVLSW-------NQE 107
+D L + L + V I P+ G VL +E
Sbjct: 458 RVD-------FAWLRRH-LPRDGTVQIHETTSGTCCLGLWGPLAGEVLPGLSTTDLSAEE 509
Query: 108 HTFSNSSFIDERFSIADVLLH----------RTWGHNEKIASDIKTYHEL---RINHGIV 154
+ + R S R W + + L R+ G+
Sbjct: 510 TYAGDVPIVALRLSTVGEPGWELHTTADFGRRLWDTLRDRGVAVAGHQALAGLRLEAGVT 569
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
P DF P++A +D + + L KG ++G++ ++ + + +R +T T +
Sbjct: 570 TPGVDFTTEHD-PYEAGLD--SAVRLDKGYFLGRDALA-GRSAATVSRRLTRLT-TGAVV 624
Query: 215 PSGSPILTDDIEIGTLGVV----VGKKALAIARI 244
SG P+ D G + +A+A +
Sbjct: 625 GSGDPVYIDGRPAGYVTSAGYGHTAGRAIAYGWL 658
>gi|269128043|ref|YP_003301413.1| glycine cleavage system T protein [Thermomonospora curvata DSM
43183]
gi|268313001|gb|ACY99375.1| glycine cleavage system T protein [Thermomonospora curvata DSM
43183]
Length = 369
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 107/316 (33%), Gaps = 66/316 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59
LS+ I V G A QA+ D + T+ AR + + P G +L ++ +
Sbjct: 55 LSHMGEIFVQGPQAA---QAL---DYALVGRLSTVKVGRARYTMLCAPDGGVLDDLIVYR 108
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----------- 108
+ +D F++ + + ++ L + + + +++ H
Sbjct: 109 LADDRFLVVANAANVATVHRALTERAASFQAEVADRSDDYALIALQGPHSQRILSRFTDV 168
Query: 109 --------TFSNSSFIDERFSIADV-------------------LLHRTWGHNEKIASDI 141
++ + IA L G + + +
Sbjct: 169 PLAEVKYYAWAEGAVAGVPALIARTGYTGEDGFELFVAAGDAVRLWRELAGAEGVLPAGL 228
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200
LR+ G+ + T P++A + + + L K G ++G++ ++
Sbjct: 229 AARDTLRLEAGMPLYGNELTAETT-PYEAGLGRV--VKLDKPGDFVGKKALAAYADTPAG 285
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA--------LAIARIDKVDHAIK 252
R+ ++ P G ++ D G + VV A +A+A +D+ A+
Sbjct: 286 RRLVGLVARGRRAPRKGYQVVRADD--GAVCGVVTSGAPSPTLGRPIAMAYVDR--GAVG 341
Query: 253 KGMALTVHGVRVKASF 268
+A+ V G R +
Sbjct: 342 AELAVDVRGRRERVDV 357
>gi|59797837|sp|Q7NFJ5|GCST_GLOVI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 359
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 97/307 (31%), Gaps = 54/307 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + +Q ++ +D+ L A+ + +L Q I+ + + ++
Sbjct: 52 SHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWV 111
Query: 67 LEID-----------------------------------------RSKRDSLIDKLLFYK 85
+ ++ + D + +L ++
Sbjct: 112 VIVNGATNDKDRRWLAEHLQGVHFDDLTGTHTLLALQGPAAVETLQPLVDIDLARLGRFE 171
Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ V + +P + E F S E + L ++ +
Sbjct: 172 -HAQVSLAGKPAFLARTGYTGEDGFEIMSLEPE-----GIALWQSLTAAGVPPCGLGARD 225
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + D + P +A + + I K Y G+E++ + + R+
Sbjct: 226 TLRLEAAMHLYGQDM-DESTTPLEASLGWV--IDWDKPDYFGREILLAQKAQGTERRLVG 282
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+ + G + + ++G + + +A+A + K I + + + G
Sbjct: 283 LTVEGRQIARHGYGLFDGEQQVGVVTSGTLTPTVDRPIALAYVGKPFAPIGSRLEVDIRG 342
Query: 262 VRVKASF 268
R A+
Sbjct: 343 RRAMATV 349
>gi|37523099|ref|NP_926476.1| glycine cleavage system protein T [Gloeobacter violaceus PCC 7421]
gi|35214102|dbj|BAC91471.1| glycine cleavage system protein T [Gloeobacter violaceus PCC 7421]
Length = 367
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 97/307 (31%), Gaps = 54/307 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + +Q ++ +D+ L A+ + +L Q I+ + + ++
Sbjct: 60 SHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWV 119
Query: 67 LEID-----------------------------------------RSKRDSLIDKLLFYK 85
+ ++ + D + +L ++
Sbjct: 120 VIVNGATNDKDRRWLAEHLQGVHFDDLTGTHTLLALQGPAAVETLQPLVDIDLARLGRFE 179
Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ V + +P + E F S E + L ++ +
Sbjct: 180 -HAQVSLAGKPAFLARTGYTGEDGFEIMSLEPE-----GIALWQSLTAAGVPPCGLGARD 233
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ + D + P +A + + I K Y G+E++ + + R+
Sbjct: 234 TLRLEAAMHLYGQDM-DESTTPLEASLGWV--IDWDKPDYFGREILLAQKAQGTERRLVG 290
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
+ + G + + ++G + + +A+A + K I + + + G
Sbjct: 291 LTVEGRQIARHGYGLFDGEQQVGVVTSGTLTPTVDRPIALAYVGKPFAPIGSRLEVDIRG 350
Query: 262 VRVKASF 268
R A+
Sbjct: 351 RRAMATV 357
>gi|296119723|ref|ZP_06838277.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM
20306]
gi|295966877|gb|EFG80148.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM
20306]
Length = 367
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 105/307 (34%), Gaps = 62/307 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A PFL A+I+ + TL A+ S I+ G I+ + + +
Sbjct: 51 LSHMGEIWVNGPDAAPFLSYALISN-MDTLKNGKAKYSMIVAEDGGIIDDLISYRFSDTK 109
Query: 65 FILEIDRSKRDSLIDKLL------------------FYKLR---------------SNVI 91
F++ + D++ + L+ S
Sbjct: 110 FLVVPNAGNTDAVWEAFNQRTEGFDVELNNESLDVAMIALQGPDAAKILVEQVADESKDE 169
Query: 92 IEIQPINGVVLS--WNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIK 142
++ P ++ + + + + E + A + +
Sbjct: 170 VDNLPYYAATMAKVAGIDTIVARTGYTGEDGFELMIYNADATAMWQTFAAVEGVTPCGLA 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSRIQHRNII 200
+ LR+ G+ + + I P +A M G++ K ++G EV+ R +
Sbjct: 230 SRDSLRLEAGMPLYGNELSRA-ITPVEAGM----GVAFRKKTADFVGAEVL-RQRLEEGP 283
Query: 201 RKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKK 253
++ +T ++ +G+ I D +GT+ ALA+ D +++
Sbjct: 284 KQVIKALTSSERRAARTGAEIYLGDQVVGTVTSGQPSPTLGHPIALALVNTD---ANLEE 340
Query: 254 GMALTVH 260
G A+ V
Sbjct: 341 GTAVEVD 347
>gi|167758909|ref|ZP_02431036.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704]
gi|167663316|gb|EDS07446.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704]
Length = 362
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 54/309 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G+ A+ LQ I+T + + AR S + G + ++ K E+ +
Sbjct: 51 SHMGEILCEGEDALANLQMILTNNFDNMKDGQARYSPMCNENGGTVDDLIVYKKAENQYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
+ ++ + +D +L ++ L+
Sbjct: 111 IVVNAANKDKDYQWMLAHQ-FGKASFRDVSDQYAQLALQGPKAMEILRKIAKEEDIPKKY 169
Query: 113 -SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
+ D + + ++ +T E I +
Sbjct: 170 YHAVFDAKAAGIPCIISKTGYTGEDGVELYLDAGLAEKLWDILLEAGKEEGLIPCGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKR 203
LR+ + + + P + + + + K ++G++ ++++ + + RKR
Sbjct: 230 DTLRMEAAMPLYGHEM-DDEVTPLETGLGF--AVKMAKEDFVGKDALIAQGEPK---RKR 283
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTV 259
+ + + D IG + +A +D + + V
Sbjct: 284 IGLKVTGRGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYTEEGTKVEVEV 343
Query: 260 HGVRVKASF 268
G V+A
Sbjct: 344 RGRIVEAFV 352
>gi|126736022|ref|ZP_01751766.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
CCS2]
gi|126714579|gb|EBA11446.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
CCS2]
Length = 1003
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 53/263 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TLP R + T G ++ ++ ++ ED+++
Sbjct: 677 VKGPDAGKFLDMMYTNMMSTLPVGKCRYGLMCTENGFLMDDGVVVRMAEDSWLCHTTTGG 736
Query: 74 RDSLIDKL-----------LFY-------------------KLRSNV------------- 90
+++ + Y KL +
Sbjct: 737 AETIHAHMEDWLQCEWWDWKVYVANVTEQYAQIAVVGPNARKLLRKLGGMDVSAEALPFM 796
Query: 91 -----IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
I +S++ E ++ + + + D L+ + +T H
Sbjct: 797 QWREGKIGDFDARVFRISFSGELSYEIAVPAGQGAAFWDALME-AGEEFGIMPYGTETLH 855
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR G + + T+ P D + +S K Y+G+ R + R + +
Sbjct: 856 ILRAEKGFIMIGDE-TDGTVIPQDLNLQW--ALSKKKEDYLGKRAHLRSHMADPNRWKLV 912
Query: 206 II-TGTDDLPPSGSPILTDDIEI 227
+ T + P G+ + D
Sbjct: 913 GLETVDGSVLPDGAYAIADGDNA 935
>gi|148555606|ref|YP_001263188.1| glycine cleavage system aminomethyltransferase T [Sphingomonas
wittichii RW1]
gi|148500796|gb|ABQ69050.1| glycine cleavage system T protein [Sphingomonas wittichii RW1]
Length = 377
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 95/307 (30%), Gaps = 48/307 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + V G L+A++ D + L R S +L QG IL ++++ D ++
Sbjct: 63 SHMGQLLVSGDGVDTALEALMPGDFVQLGVDRMRYSLLLDDQGGILDDLMVTRRAGDFYL 122
Query: 67 LEIDRSKRDSL------------IDKLLFYKLRS-------NVIIEIQP-INGVVLSWNQ 106
+ +K D + ++ L + L + + + I P + +
Sbjct: 123 VVNGATKADDIAHLHEHLPEELTLNHLDEHALLALQGPKAVDALARICPGVEMLTFMTAG 182
Query: 107 EHTFSNSSFIDERFSIADVLLHRT--------------WGHNEKIASDIKTYHELRINHG 152
+ + R E + LR+ G
Sbjct: 183 AFELAGAPVWISRSGYTGEDGFEISLPADAAEAAATLLLAQPEVKPIGLGARDSLRLEAG 242
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMII 207
+ D T P A + G ++ K G + G + R RKR +I
Sbjct: 243 LPLYGHDLDTDTD-PATAGL----GFAVPKRRRAEGGFPGATRIVRDLREGAPRKRIGLI 297
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263
G+ I D +G + +L A+ + + + + + V G R
Sbjct: 298 LAGRLPAREGAAIFDGDTAVGAVSSGGFSPSLQVPIAMGYVLAASAELNRPLQIEVRGKR 357
Query: 264 VKASFPH 270
+ A
Sbjct: 358 LDAVVAP 364
>gi|205353979|ref|YP_002227780.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207858318|ref|YP_002244969.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|226697523|sp|B5QXI2|GCST_SALEP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226697524|sp|B5RE16|GCST_SALG2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|205273760|emb|CAR38755.1| Glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710121|emb|CAR34476.1| Glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326629092|gb|EGE35435.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 364
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ +I ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123
L ++ + R+ + + + + I ++ ++ + + F DE R ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169
Query: 124 DV 125
+
Sbjct: 170 GM 171
>gi|198246130|ref|YP_002217033.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|226697522|sp|B5FUG8|GCST_SALDC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|197940646|gb|ACH77979.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326624801|gb|EGE31146.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 364
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ +I ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123
L ++ + R+ + + + + I ++ ++ + + F DE R ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169
Query: 124 DV 125
+
Sbjct: 170 GM 171
>gi|116255742|ref|YP_771575.1| putative glycine degradation aminomethyltransferase [Rhizobium
leguminosarum bv. viciae 3841]
gi|115260390|emb|CAK03494.1| putative glycine degradation aminomethyltransferase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 789
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 60/297 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516
Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVII----- 92
F + + ++ L K R II
Sbjct: 517 NFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574
Query: 93 --EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139
+I + + + F + + R L + + H + +
Sbjct: 575 QPDIGELEWFRFTVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTVFDAVWEAGQP 634
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +RI G++ + +F T P +A + + + +IG+E + R
Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDEFIGREALIR 693
Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ R + + ++ G I ++G + K +A+ARID
Sbjct: 694 --RKEHPRHLLVGLDIKANEAVGHGDCIHIGRGQVGVITSATRSPILGKTIALARID 748
>gi|72383127|ref|YP_292482.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. NATL2A]
gi|123773748|sp|Q46I99|GCST_PROMT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|72002977|gb|AAZ58779.1| Glycine cleavage system T protein [Prochlorococcus marinus str.
NATL2A]
Length = 372
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ GK+ LQ ++ +DV + A + L G I +I
Sbjct: 51 SHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTN 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-VII-EIQPINGVVLSWNQEHTFSNSSFIDER 119
E++ +L I+ ++++S I+ L L + I E P ++ E + ++E
Sbjct: 111 EESIVLVINAARKESDIEWLS-SNLFKKEITISEFMPEGALIAIQGPESISTLEKILEEP 169
Query: 120 FSIADVLLHRTWGHNEKI 137
S HRT N +
Sbjct: 170 LSNLPRFGHRTITSNPNL 187
>gi|319954423|ref|YP_004165690.1| aminomethyltransferase [Cellulophaga algicola DSM 14237]
gi|319423083|gb|ADV50192.1| Aminomethyltransferase [Cellulophaga algicola DSM 14237]
Length = 361
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 105/309 (33%), Gaps = 51/309 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +AI +Q + + D L A+ S + G I+ +I +I+E+ ++
Sbjct: 49 SHMGEFLISGPNAISLIQKVSSNDASKLAVGKAQYSCMPNETGGIVDDLIIYQIKEEQYL 108
Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------NVIIEIQPINGVVLSWNQE 107
L ++ S + + + Y +R+ + +Q + V LS +
Sbjct: 109 LVVNASNIEKDWNHISKYNKDINADMRNLSEDYSLLAIQGPKAVEAMQSLTSVDLSAIKF 168
Query: 108 HTFSNSSFIDERFSIADVLLH----------------RTWGHNEKIASD-------IKTY 144
+TF + F I + + W + D +
Sbjct: 169 YTFEVAPFAGIDNVIISATGYTGSGGFEIYCKNTEVAQIWTKVFEAGKDFGIKPIGLAAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D T P +A + + TK ++ E +++ + RK
Sbjct: 229 DTLRLEMGYCLYGNDI-NDTTSPIEAGLGWV--TKFTKD-FVNSENLAKEKAEGSARKLI 284
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+P I+ + +IG + K + + + K A+ + + + +
Sbjct: 285 AFELDERGIPRHDYEIVNANGEKIGIVTSGTMSPSMNKGIGLGYVPKAVSAVGEKIYIQI 344
Query: 260 HGVRVKASF 268
+ A+
Sbjct: 345 RKKAIPATI 353
>gi|254455529|ref|ZP_05068958.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082531|gb|EDZ59957.1| aminomethyltransferase, putative [Candidatus Pelagibacter sp.
HTCC7211]
Length = 428
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 89/284 (31%), Gaps = 61/284 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A+ LQ I D+ + G I+ L+ +I+E+ + +
Sbjct: 105 EISGPDALKLLQRIFPRDISKVKKGRCSYQFACYHDGGIITDGLLLRIDENCYWF----A 160
Query: 73 KRDSLIDKLLFYKLRS---NVIIE----------------------IQPINGVVLSWN-Q 106
+ D + L +YK S +V I+ +PI ++
Sbjct: 161 QADGDM--LSWYKANSEGLDVEIKEPNVFVSQIQGPKSMELLDQLIDEPIANTWKYFDWV 218
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------------DIKTYHELR 148
E T +N I R + L + E A ++ R
Sbjct: 219 EITMANEKVIISRTGFTNELGWEIYFRPENDAEKLGNLILENGKKMGMIITATPSFRGRR 278
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
I G++ DF + P + + L K +IG++ + R I
Sbjct: 279 IEAGLLSAGQDF-SNETNPFSVGLGRF--VDLKKDNFIGKKALLNADKEC----RSWGIR 331
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVD 248
D + G I ++ IG + + I +DK D
Sbjct: 332 VVDGIAKKGRYIKINNQSIGKITSSTWSPYQVCGVGIVLLDKSD 375
>gi|166032436|ref|ZP_02235265.1| hypothetical protein DORFOR_02151 [Dorea formicigenerans ATCC
27755]
gi|166028159|gb|EDR46916.1| hypothetical protein DORFOR_02151 [Dorea formicigenerans ATCC
27755]
Length = 363
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 32/69 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ LQ ++T D + AR S + G + ++ K ++ +
Sbjct: 51 SHMGEVLCQGKDALANLQKLLTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRGDNDYF 110
Query: 67 LEIDRSKRD 75
+ ++ + +D
Sbjct: 111 IVVNAANKD 119
>gi|297559405|ref|YP_003678379.1| glycine cleavage system protein T [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843853|gb|ADH65873.1| glycine cleavage system T protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 372
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 47/278 (16%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I++ G A L A++ + + AR S I G +L ++ ++ ED
Sbjct: 57 LSHMGEIRLTGPQAAQALDHALV-GHLSQVKVGRARYSMITAEDGGVLDDLIVYRLREDE 115
Query: 65 FILEIDRSKR----DSLIDKLLFYKL-----------------RS-NVI--IEIQPINGV 100
+++ + + +L ++ + + R+ +V+ + ++G+
Sbjct: 116 YLVVANAANTAVVAPALAERAAGFDVEVRDESAEYALIAVQGPRAVDVLAPLTDADLDGI 175
Query: 101 VLSWNQEHTFSNSSF------------------IDERFSIADVLLHRTWGHNEKIASDIK 142
EHT + +R L + + + +
Sbjct: 176 RYYAGYEHTVAGEPVLLARTGYTGEDGFEIFVSPADRAPKVWDALMAEGERHGLVPAGLS 235
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ G+ + + + P DA + + + KG ++G+ + + R+
Sbjct: 236 ARDTLRMEAGMPLYGQELT-ADLTPFDAGLGRV--VKFDKGDFVGRAALEEASRSSRPRR 292
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
++ G +L D +GT+ L
Sbjct: 293 LIGLVARGRRPLRQGQEVLRDGTPVGTITSGAPSPTLG 330
>gi|260575690|ref|ZP_05843687.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
gi|259022088|gb|EEW25387.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
Length = 813
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 67/321 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S +V G +L A IT V + +G+I+ I+++ ED
Sbjct: 496 LPGFSRFRVKGGHVAAWLGAQITGKVPGV--GRLGLGYFADGKGRIVTEMSIARLAEDEV 553
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------NQEHTF 110
+L + + + L + +E+ + + T
Sbjct: 554 LLITAATAQAHDREWLQRH---LAAGLELSDETDAWACQILTGPSSRAILAQVCDADLTR 610
Query: 111 SNSSFIDERFSIADVLLHRT-------WGHNEKIASDIKTYHE----------------- 146
++ R A+VLL R W + ++A +
Sbjct: 611 PWLTWQAARIGGAEVLLFRVSFAGELGWEIHSRVADTAAVFDRVMQAGQGHGLRPFGMFA 670
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G D ++ + K + G+ ++R + + ++
Sbjct: 671 LNSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDFAKPAFRGRGALTRERDAGVAKRF 727
Query: 204 PMIITGTDDL-PPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256
++ D PP S + +G V AL + R D G+A
Sbjct: 728 VTLVVQAGDCDPPYMSTLWHGGAVVGETTSADWGHRVAACVALGMLRADLA----VPGVA 783
Query: 257 LTVH------GVRVKASFPHW 271
L V V+A P W
Sbjct: 784 LEVEVFGQRYPAVVQADAPLW 804
>gi|283457528|ref|YP_003362111.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18]
gi|283133526|dbj|BAI64291.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18]
Length = 378
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 104/289 (35%), Gaps = 62/289 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ +V G A FL A+++ + L A+ S ++ +G ++ + ++ ++
Sbjct: 56 LSHMGEFRVTGPDAGAFLDYALVSN-MSILKVGKAKYSILVNDKGGVIDDLITYRLGDEE 114
Query: 65 FI-------LEIDRSKR---------------------------------------DSLI 78
F+ ++ D + + +
Sbjct: 115 FMVVPNAANIDTDFAAMSERLGDFNVEFVNESEQTSLVAVQGPRAEEILLVAGVSDEEAV 174
Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-- 136
+L +Y ++V + + ++ ++ F+ ++ L + E
Sbjct: 175 RELKYY---ASVPLTVAGVDVLLARTGYTGEDGFELFVPNENAV--ELWDKLAAAGEPFG 229
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC--YIGQEVVSR 193
I + + + LR+ G+ + I P ++ + L I+L K ++G+E ++
Sbjct: 230 MIPAGLASRDSLRLEAGMPLYGNELGLE-ITPFESGLGRLVEIALEKKAANFVGREALTE 288
Query: 194 IQHRNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVVGKKALA 240
+ ++ ++ + + P +GS ++ + EIG + + L
Sbjct: 289 L-AKSESKRILVGLKAQAKRPARAGSKLVDAEGNEIGEVTSGIPSPTLG 336
>gi|256391033|ref|YP_003112597.1| glycine cleavage system aminomethyltransferase T [Catenulispora
acidiphila DSM 44928]
gi|256357259|gb|ACU70756.1| glycine cleavage system T protein [Catenulispora acidiphila DSM
44928]
Length = 369
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 51/291 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAIL-TPQGKILLYFLISKIEEDTF 65
S+ V G A F+ +++ D+ + A+ + G ++ + +
Sbjct: 56 SHLGKASVTGPGAAAFVNSVLANDLQRIEDGQAQYTLCCDDATGGVVDDLIAYLNGPEDV 115
Query: 66 ILEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
L + + ++ +L ++ + ++ V+ S
Sbjct: 116 FLIPNAANTSEVVRRLREAAPEGVTVQNRHRDFGVLAVQGPKSAAVLAELGLPTDHDYMS 175
Query: 115 FIDERFSIADVLLHRT-------------WGHNEKIASDIKTY--------------HEL 147
F F A + + RT W E + ++ L
Sbjct: 176 FTVASFENAPLTVCRTGYTGEHGYELVAPWDKTEALWDALQAAGEEFGIRPCGLGARDTL 235
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G D I P+ A + K + G+EV+ + ++ I
Sbjct: 236 RTEMGYPLHGQDLSME-ITPNMARAGW--AVGWKKPAFWGREVLLAEREAG-AKRLLRGI 291
Query: 208 TGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
D P ++ D +IG + LA+ + +
Sbjct: 292 RAVDRAIPRAHMVVNDADGKQIGEVTSGTFSPTLREGIGLALLDREYTEGD 342
>gi|329850272|ref|ZP_08265117.1| glycine cleavage system T protein [Asticcacaulis biprosthecum C19]
gi|328840587|gb|EGF90158.1| glycine cleavage system T protein [Asticcacaulis biprosthecum C19]
Length = 350
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/302 (17%), Positives = 98/302 (32%), Gaps = 40/302 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A+ L+ + D TL + S +L +G IL +++S+ E + F
Sbjct: 33 SHMGQARLTGADAVATLETLTPTDFATLVLGKQKYSLLLNAEGGILDDWMVSRPEGNGFF 92
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQP--------------------IN 98
L ++ + +D + L F L ++ +Q
Sbjct: 93 LVVNAACKDQDFEILAENIIGDSHFEVLGDRALLALQGPKAKDVMQSVCPAACELYFMEC 152
Query: 99 GVVLSWNQEHTFSNSSFIDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINH 151
G Q S S + E +I L H+ + LR+
Sbjct: 153 GSFDLLGQTAFVSRSGYTGEDGFEISVPNAIVGELWDLLLTHDVVKPIGLGARDSLRLEA 212
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ + L + LT+G G + + + + R R I
Sbjct: 213 GMPLYGHEMDVGYTLVEANLGFAMQKSRLTRGDIRGIDRIRQQLDGGLDRVRVAIRVLEG 272
Query: 212 DLPPSGSPILT-DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ IL+ D E+G + V +L A+ + A+ + L V G A
Sbjct: 273 PPAREGAKILSEDGAELGIVTSGVPSPSLGYSIAMGYVPPASSALGTKLKLEVRGKPYAA 332
Query: 267 SF 268
Sbjct: 333 EI 334
>gi|134142798|gb|ABO61733.1| mitochondrial glycine decarboxylase complex T-protein [Populus
tremuloides]
Length = 408
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 57/302 (18%), Positives = 97/302 (32%), Gaps = 58/302 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK IPFL+ ++ ADV L + +G + +I+K++ D + ++
Sbjct: 91 SLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQNDHMYIVVNAG 150
Query: 73 KRD---------------------------------------SLIDKLLFYKLRSNV--- 90
RD S + L L S +
Sbjct: 151 CRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLSASALQHLTKDDL-SKLYFG 209
Query: 91 IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
I ING + E F S + +A +L ++ G +
Sbjct: 210 EFRITDINGAHCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTG--LGARD 267
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D I P +A + G +G ++G EV+ + + R
Sbjct: 268 SLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGAEVILKQLAEG-PKIRL 325
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+ T T P S S I + IG + KK +A+ + H + V
Sbjct: 326 VGFTSTGPPPRSHSEIQDEKGTNIGEITSGGFSPCLKKNIAMGYVKSGSHKAGTKAKILV 385
Query: 260 HG 261
G
Sbjct: 386 RG 387
>gi|189485418|ref|YP_001956359.1| glycine cleavage system T protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287377|dbj|BAG13898.1| glycine cleavage system T protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 354
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 95/291 (32%), Gaps = 54/291 (18%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G++A FL + ++ LP K AR S IL +G I ++ K + +++
Sbjct: 50 HMGTFTVTGENAEKFLNYVTLGNISGLPDKKARYSMILNEEGGIKDDIIVYKFGSE-YMI 108
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
++ + + L +K+ V I+ + +++ + + E
Sbjct: 109 VVNAGNLEKDFNWLSKHKM-EKVEIKNISSDISLIAIQGPKSAEILQSVSETDIKSMKYF 167
Query: 119 ------------------RFSIADVLLHRTWGHNEKIASDIKTY-------------HEL 147
R + +++ + L
Sbjct: 168 TVSILKLKDISVDFYRVARTGYTGEDGFEIFISKDQVNKFWEKLMSLSVKPCGLGCRDTL 227
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ + + I P DA + I+ +IG+ + ++ +++ K+ +
Sbjct: 228 RLEACMPLHGHEIG-ENINPIDAGFQKI--INWDSD-FIGKNRLLLLKDKSM--KKSIAF 281
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
T + + + I + + ++G + +A+ D ++
Sbjct: 282 ECTSGIARNSNEIFSGNKKVGYVTSGSFSPTLKKAIGIALIDADAGTDELE 332
>gi|116255753|ref|YP_771586.1| putative aminomethyltransferase/glycine cleavage protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115260401|emb|CAK03505.1| putative aminomethyltransferase/glycine cleavage protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 377
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 73/313 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+ + G AI L +I T D+ + + + +L +G ++ + ++++L
Sbjct: 59 VHLVGPHAIAVLDSITTRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNSWMLVHGS 118
Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
D L +D L Y + I +
Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ +
Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQAPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + D ++G + + +K++AIAR+D VD A+
Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTQKSMAIARLD-VDKAVH- 343
Query: 254 GMALTVHGVRVKA 266
G L V G VKA
Sbjct: 344 GTKLEVRGKTVKA 356
>gi|296104568|ref|YP_003614714.1| glycine cleavage system aminomethyltransferase T [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059027|gb|ADF63765.1| glycine cleavage system aminomethyltransferase T [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 347
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + R+ + + + + I ++ ++ ++ + A
Sbjct: 93 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFNNEQREATA 152
Query: 126 LLHRTWG 132
+ +G
Sbjct: 153 GMKPFFG 159
>gi|320582443|gb|EFW96660.1| putative nuclear cohesin complex SMC ATPase [Pichia angusta DL-1]
Length = 1518
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G + FLQ + D+ +L + S +L G ++ +I+K +ED+F + +
Sbjct: 41 RIKGPNTTSFLQKLCPTDLRSLKPFHSTLSVLLNNNGGVIDDCMITKHDEDSFYIVTNAG 100
Query: 73 KRDSLIDKLL 82
R I+ +
Sbjct: 101 CRAKDIEFIK 110
>gi|261334973|emb|CBH17967.1| aminomethyltransferase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 375
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 114/310 (36%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G FL+ + + LP A + L + + ++++ +D +
Sbjct: 54 SHFGVVEVFGADREKFLEWLTPSAPSRLPSGKAALTMFLNDRAGVKDDCIVTRY-DDRLV 112
Query: 67 LEIDRSKRDSLIDKLLFYKL------------RSNVII-----------EIQPINGVVLS 103
+ ++ +D +I + R+ V + ++ ++ ++
Sbjct: 113 VVVNAGCKDKMIAYMRQSVADFTGDVALEMEDRAIVTVQGPKAASALAPHVEDLDKLLFM 172
Query: 104 WNQEH---------TFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147
++ T + S+ E R A ++ + + A+ + L
Sbjct: 173 QGRQDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRP 204
R G+ + + M + +T+G ++G E ++++ + + R R
Sbjct: 233 RTEAGLNLYSHELSEDIDPVAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRV 292
Query: 205 MIITGT--DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
I+ +P +G+P+L + +G + V + +A+ +D+ I + + L
Sbjct: 293 GILAAPERGPIPRNGTPVLVEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLD 352
Query: 259 VHGVRVKASF 268
V G VKA
Sbjct: 353 VRGKLVKAEI 362
>gi|262164342|ref|ZP_06032080.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus VM223]
gi|262026722|gb|EEY45389.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus VM223]
Length = 376
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 92/287 (32%), Gaps = 50/287 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + ++ I L + L ++
Sbjct: 80 DIIDLPAGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKEQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVANMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + ++A + + + + +
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEK 364
>gi|241666499|ref|YP_002984583.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861956|gb|ACS59621.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 377
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 101/314 (32%), Gaps = 73/314 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+ + G AI L +I + D+ + + + +L +G ++ + ++++L
Sbjct: 59 VHLVGPHAIAVLDSITSRDLTKIYPGRSVYATMLNERGHFTDDCIVYRTGPNSWMLVHGS 118
Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
D L +D L Y + I +
Sbjct: 119 GSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 229
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ +
Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGK 286
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + D ++G + + KK++AIAR+D VD A+
Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 343
Query: 254 GMALTVHGVRVKAS 267
G L V G VKAS
Sbjct: 344 GTKLEVRGKTVKAS 357
>gi|269140284|ref|YP_003296985.1| glycine cleavage system aminomethyltransferase T [Edwardsiella
tarda EIB202]
gi|267985945|gb|ACY85774.1| glycine cleavage system aminomethyltransferase T [Edwardsiella
tarda EIB202]
gi|304560110|gb|ADM42774.1| Aminomethyltransferase [Edwardsiella tarda FL6-60]
Length = 374
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A FL+ ++ DV L A SA+L G ++ ++ + + F
Sbjct: 50 SHMTIVDLHGVKARDFLRYLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFLADQHF 109
Query: 66 ILEIDRSKRDSLIDKL 81
L ++ + R+ + +
Sbjct: 110 RLVVNSATRERDLAWI 125
>gi|55376916|ref|YP_134767.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula
marismortui ATCC 43049]
gi|55229641|gb|AAV45061.1| sacrosine dehydrogenase/glycine cleavage T-protein [Haloarcula
marismortui ATCC 43049]
Length = 850
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 90/277 (32%), Gaps = 57/277 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G+ + FLQ + + D+ L R S +L G IL + K++++ F++
Sbjct: 536 IMVEGEGSQAFLQQVCSNDMD-LDTGQVRYSLLLNEGGGILADITVVKLDDEEFMVTTGG 594
Query: 72 SKRDSLI-DKLLFYKLRSNVIIEIQPINGV---VLSWNQ----------EHTFSNSSF-- 115
+ L + + + G + W + +N+ F
Sbjct: 595 GNSPGIHGGHLED---EAPATVSVHVEEGAKSTIGLWGPNARLLLQRCTDADVTNNGFPY 651
Query: 116 -------------IDERFSIADVLLH----------RTWGHNEKIASDI-------KTYH 145
I R S L R W + D+
Sbjct: 652 FSAKQMYVGDVPVIALRVSYVGELGWELWAPTEYGQRLWETLQDAGEDLGVRPMGGGALS 711
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RP 204
+R+ G TD + P +A + + +IG+E + + + I K P
Sbjct: 712 SMRLEKGYRLWGTDIDTDS-NPFEAGLPFAVDMDTE---FIGKEALETAREKGIESKITP 767
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ + + D+ SG P+ D IG + G +I
Sbjct: 768 LTLDDSTDIMLSGRPVTKDGDAIGYV--QAGNYGYSI 802
>gi|323349510|gb|EGA83734.1| Gcv1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355796|gb|EGA87610.1| Gcv1p [Saccharomyces cerevisiae VL3]
Length = 333
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 5 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 64
Query: 72 SKRD 75
+
Sbjct: 65 GCAE 68
>gi|323338337|gb|EGA79565.1| Gcv1p [Saccharomyces cerevisiae Vin13]
Length = 361
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 33 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 92
Query: 72 SKRD 75
+
Sbjct: 93 GCAE 96
>gi|323334266|gb|EGA75648.1| Gcv1p [Saccharomyces cerevisiae AWRI796]
Length = 361
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 33 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 92
Query: 72 SKRD 75
+
Sbjct: 93 GCAE 96
>gi|207346849|gb|EDZ73217.1| YDR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 400
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 131
Query: 72 SKRD 75
+
Sbjct: 132 GCAE 135
>gi|6320222|ref|NP_010302.1| Gcv1p [Saccharomyces cerevisiae S288c]
gi|1707880|sp|P48015|GCST_YEAST RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
AltName: Full=Glycine decarboxylase complex subunit T;
Flags: Precursor
gi|840872|emb|CAA89844.1| Gcv1p [Saccharomyces cerevisiae]
gi|1216226|emb|CAA65211.1| glycine cleavage T protein [Saccharomyces cerevisiae]
gi|1431446|emb|CAA98840.1| GCV1 [Saccharomyces cerevisiae]
gi|151942007|gb|EDN60363.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae
YJM789]
gi|190405007|gb|EDV08274.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae
RM11-1a]
gi|256273257|gb|EEU08200.1| Gcv1p [Saccharomyces cerevisiae JAY291]
gi|259145264|emb|CAY78528.1| Gcv1p [Saccharomyces cerevisiae EC1118]
gi|285811041|tpg|DAA11865.1| TPA: Gcv1p [Saccharomyces cerevisiae S288c]
Length = 400
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 131
Query: 72 SKRD 75
+
Sbjct: 132 GCAE 135
>gi|253687023|ref|YP_003016213.1| glycine cleavage system T protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259647495|sp|C6D8W9|GCST_PECCP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|251753601|gb|ACT11677.1| glycine cleavage system T protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 371
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + + I + +V +
Sbjct: 110 RLVVNSATREKDLAWIEQHAAPFGIEIREREDLALVAVQGPQA 152
>gi|238026645|ref|YP_002910876.1| FAD dependent oxidoreductase [Burkholderia glumae BGR1]
gi|237875839|gb|ACR28172.1| FAD dependent oxidoreductase [Burkholderia glumae BGR1]
Length = 829
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 57/291 (19%)
Query: 3 SVYLSNQSFIK---VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK 59
+V L ++S + V G+ A LQ+ + DV + S IL +G ++++
Sbjct: 495 AVALFDRSALAKLLVKGRDAESALQSRLANDVA-VAPGSIVRSGILNTRGGYESDVVLAR 553
Query: 60 IEEDTFILEIDRSKRDSLIDKLLF-----------------YKLRS-----------NVI 91
+ +D ++L ++ +D L Y L S V
Sbjct: 554 LADDRYLLLTGTTQATRDLDLLERHLEAGDRRCVALDVTGQYALFSLIGPHARALLQRVS 613
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHN 134
G +E +++ R +IA
Sbjct: 614 RADLRDAGFAAGTCREIELGHATVHALRHAIAGAPGWDLLVPVESAVPVHAALVHAGAAL 673
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+ + LRI +G + P ++ P +A + L +++ + +R
Sbjct: 674 GLVQAGEYALESLRIENGQAAWGRELSP-SLDPFEAGLAGLCKLAMPIPFTGSAALAARA 732
Query: 195 QHRNIIRKRPMIITGTDDLPP----SGSPILTDDIEIGTLGVVVGKKALAI 241
+ +R ++ + P G IL D +G L L +
Sbjct: 733 ---GLPCRRRVVALRVEGRPDVTLWGGEAILRDGAAVGLLSSAGFGHTLGL 780
>gi|282897570|ref|ZP_06305570.1| Glycine cleavage system T protein [Raphidiopsis brookii D9]
gi|281197493|gb|EFA72389.1| Glycine cleavage system T protein [Raphidiopsis brookii D9]
Length = 368
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 105/319 (32%), Gaps = 76/319 (23%)
Query: 21 PF-LQA---------IITADVLTLPYKIARGSAILTPQ-------------GKILLYFLI 57
F LQ ++ +D+ L ++ + +L PQ GK
Sbjct: 53 KFTLQGKNLMAELEKLVPSDLSRLEPGQSQYTVLLNPQGGIIDDIIIYCQSGK------- 105
Query: 58 SKIEEDTFILEIDRSKRDSLIDKL---------LFYKL-RSNVIIEIQP--INGVVLSWN 105
+ + ++ ++ S D + L F L R ++I +Q G++ S+
Sbjct: 106 -NTDNEKVVIIVNASTTDKDRNWLSQNLDLNQIQFEDLSRDKILIALQGPKATGILQSFV 164
Query: 106 QEHTFSNSSFIDERFSIADVL--LHRTWGHNE-------KIASDIKTY------------ 144
+ +F +I L RT E ++ +
Sbjct: 165 ADDLTPIKAFGHLETAILGGRAFLARTGYTGEDGFEIMVDSEPGLEFWQSLHGVGVTPCG 224
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ + D +T P +A + L + KG +IG++V+ R + + +
Sbjct: 225 LGCRDTLRLEAAMSLYGQDIDDNTT-PLEAGLAWLVHLD-RKGDFIGRDVLERQKIQGLE 282
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKG 254
RK + T ++P G +L+ IG + ALA + + +
Sbjct: 283 RKLVGLQTQGRNIPRHGYSVLSSGKIIGQVTSGTLSPTLNYPIALAYVSAELANIKQQLE 342
Query: 255 MALTVHGVRVKASFPHWYK 273
+ + + +YK
Sbjct: 343 VDIRGKTYPAQVVKRPFYK 361
>gi|153854094|ref|ZP_01995402.1| hypothetical protein DORLON_01393 [Dorea longicatena DSM 13814]
gi|149753143|gb|EDM63074.1| hypothetical protein DORLON_01393 [Dorea longicatena DSM 13814]
Length = 362
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 95/310 (30%), Gaps = 56/310 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ L I+T D + AR S + G + ++ K ++ +
Sbjct: 51 SHMGEVLCEGKDALANLNQILTNDFTNMVDGQARYSPMCNEHGGTVDDLIVYKKSDEHYF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN-------------- 112
+ ++ + +D +L ++ V + L+
Sbjct: 111 IVVNAANKDKDYQWMLRHQ-FGEVTFKDVSSGYAQLALQGPKAMQILKKLTAEENIPKKY 169
Query: 113 -SSFIDERFSIADVLLHRTWGHNEK---------------------------IASDIKTY 144
+ D + ++ +T E I +
Sbjct: 170 YHAVFDTEVAGIPCIISKTGYTGEDGVELYLASEKAEEMWNTLLEAGKEEGLIPCGLGAR 229
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI--IRK 202
LR+ + + I P + + + + K +IG+ S ++ + I++
Sbjct: 230 DTLRMEAAMPLYGHEM-NDDITPLETGLKF--AVKMAKNDFIGK---SALEEKGTPSIKR 283
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
+ +TG + + D +IG +A+A +D I +
Sbjct: 284 IGLKVTGRG-IIREHQDVYVGDKKIGHTTSGTHCPYLGYPIAMALVDADSVEIGDTVEAD 342
Query: 259 VHGVRVKASF 268
V G RV A
Sbjct: 343 VRGRRVAAEV 352
>gi|292493896|ref|YP_003529335.1| glycine cleavage system protein T [Nitrosococcus halophilus Nc4]
gi|291582491|gb|ADE16948.1| glycine cleavage system T protein [Nitrosococcus halophilus Nc4]
Length = 371
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 47/281 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G+ PFL+ ++ +V A S IL QG ++ ++ + E F
Sbjct: 50 SHMAVIDLKGEKVRPFLRRLLANNVDRSTVPGTALYSCILNEQGGVIDDLIVYFMAEQKF 109
Query: 66 ILEIDRSKRDSLIDK-----------------LLFYKL-----RSNV------II--EIQ 95
+ + RD + L + R+ V + ++
Sbjct: 110 RIVSNAGTRDKDLTWIETQADPFDVQVEERSDLAMIAVQGPEARTKVHEQLPETLKEKVS 169
Query: 96 PINGVVLSWNQEHTFSNSSFIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ W E + + + E + + + LR+
Sbjct: 170 SLKRFQAVWEDELFVARTGYTGEDGYELLLPGAKAQDWWQRLVASGVTPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ TD T P ++ + T+ +IG++ + Q R+ ++
Sbjct: 230 EAGMCLYGTDM-DETTTPLESGLGWTVAWEPTERDFIGRDALEAQQAAGCPRQLVGLLLQ 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARI 244
L +G ++T +G + G +++A+AR+
Sbjct: 289 GKGLMRNGQRVVT---PVGEGVITSGGFSPSLERSIALARV 326
>gi|71083990|ref|YP_266710.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
gi|71063103|gb|AAZ22106.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
Length = 775
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 58/297 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS ++ G A +Q +T +V L +A+ G +L + K+ +
Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSIGQVVYTAMCYENGCMLDDGTLFKLGQ 501
Query: 63 DTF-ILEIDRSKRDSLIDKLLF--YKLRSN--------------------------VIIE 93
D F + D + L ++ YK+ I+
Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKNYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTAPIQ 561
Query: 94 IQPINGVVLSWNQEHTF--SNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139
+N + + + R L + W H + A
Sbjct: 562 PSITELEWFRFNIARIDHETGTPIVISRTGYTGELGYEIWCHPKDAAEVWDKVWEAGKEF 621
Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
++ +RI G++ +F T P +A + + + +IG+E + I
Sbjct: 622 DITPLGLEALDMVRIEAGLIFYGYEFDDQTD-PFEAGIGFTVPLKTKEDDFIGKEEL--I 678
Query: 195 QHRNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VGKKALAIARID 245
+ + +K+ + + P G + ++G + +GK +A+ RID
Sbjct: 679 KRKANPQKKLVGLELVGHEPALHGDCVHVGRGQVGVITSGMLSPKLGKN-IALCRID 734
>gi|218295168|ref|ZP_03496004.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
gi|218244371|gb|EED10896.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
Length = 349
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 56/305 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ A+PFLQ DV L A+ S + + +G ++ + ++ E ++
Sbjct: 49 SHMGEFLIRGEEALPFLQWATVNDVGKLKVGRAQYSMLPSERGGVVDDIYLYRLGEAVYL 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------- 113
+ ++ + +D L L +E++ ++ + + +
Sbjct: 109 MVVNAANIAKDLDHLK--ALARGFRVEVEDVSEATALLALQGPEAAAILQSLTGADLSAR 166
Query: 114 ----------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------L 147
+ R + + + L
Sbjct: 167 RKNDVFEAQVAGRPARLARTGYTGEDGFELFLAPEDAEAIFEALLAAGARPCGLGARDTL 226
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G + P + + K ++G+E + R++ + +
Sbjct: 227 RLEAGFPLYGHELT-EATNPLCTPWAWV--VKREKD-FLGKEAMLAS----PCREKLVGL 278
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVR 263
+P G +L++ +G + K +A+A ++K + + V G
Sbjct: 279 VLETGIPREGYAVLSEKGPVGRVTSGGYSPLLEKGIALAYVEK---EAEGPFFVEVRGRA 335
Query: 264 VKASF 268
V AS
Sbjct: 336 VPASI 340
>gi|255264150|ref|ZP_05343492.1| aminomethyltransferase [Thalassiobium sp. R2A62]
gi|255106485|gb|EET49159.1| aminomethyltransferase [Thalassiobium sp. R2A62]
Length = 403
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 59/294 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A L + T V + G ++ ++ ++ ED F +
Sbjct: 83 IEISGPDAETLLNKVFTRSVSKVKPGRCSYQFACYHDGGMITDGVLLRLAEDRFWM---- 138
Query: 72 SKRD-SLIDKLLFYK-------------------------------------LR----SN 89
++ D L + R +
Sbjct: 139 AQADGDLFSWYKAHAEGLDVKIHDPNVWVSQIQGPRSLELLAAVLDGPMPDPFRYFDCAE 198
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
V I Q + E + D + + + + RI
Sbjct: 199 VSIAGQTCWISRSGFTNELGWEVYLLPDTNIPAIGDRIMEVGAAFGILLTGTPVFRARRI 258
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+++ +DF + P DA + + ++G++ + R M +TG
Sbjct: 259 EAGLLNAGSDFG-AETMPFDAGLGGF--VEFDDRDFVGRKALEAAD--KSCRTWGMRVTG 313
Query: 210 TDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTV 259
+ G + D E+G + + I R+D D A G + V
Sbjct: 314 --GVAQLGRVMTIDGKEVGLVCSSGYSPYQGCGVCIVRMD--DPAQGPGTKVEV 363
>gi|310766525|gb|ADP11475.1| glycine cleavage system aminomethyltransferase T [Erwinia sp.
Ejp617]
Length = 365
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L ++ ++ I ED F
Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTAMLNASAGVIDDLIVYFISEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------- 117
L ++ + R+ + + + V + + ++ D
Sbjct: 110 RLVVNSATREKDLAWVAEHAAAYGVELTERDDLSLIAVQGPNAQRKAQRVFDDIQRDAVS 169
Query: 118 -----------------------ERFSIA-----DVLLHRTWGHNEKIASDIKTYHELRI 149
+ IA L + + + LR+
Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNEQAAELWQQLLAAGVQPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + T+ P A M G + +IG+E++ + + R
Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRQFIGREMLELQRAKGTERLVGLIMTE 288
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
K + + +L I G+ +G +A+AR+ + + +
Sbjct: 289 KGVLRNALPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGDQAVVQIRNRA 346
Query: 262 VRVKASFP 269
+ V + P
Sbjct: 347 MPVTVTKP 354
>gi|254390790|ref|ZP_05006002.1| aminomethyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|294815230|ref|ZP_06773873.1| Aminomethyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|326443586|ref|ZP_08218320.1| glycine cleavage system aminomethyltransferase T [Streptomyces
clavuligerus ATCC 27064]
gi|197704489|gb|EDY50301.1| aminomethyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|294327829|gb|EFG09472.1| Aminomethyltransferase [Streptomyces clavuligerus ATCC 27064]
Length = 371
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 91/281 (32%), Gaps = 50/281 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + ++ AR + I G IL ++ ++ E
Sbjct: 52 LSHMGEITVLGPQAAALLDFALVGN-IGSVAVGRARYTMICQEDGGILDDLIVYRLGETE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSN---------VIIEIQPINGV 100
+++ + S +++D L Y L + + ++G+
Sbjct: 111 YMVVANASNAQTVLDALTARSAGFDAEVRDDREAYALLAVQGPASPGILAQLTDADLDGL 170
Query: 101 VLSWNQEHTFSN----------------SSFIDERFS-IADVLLHRTWGHNEKIASDIKT 143
T + F++ R++ L +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVEPRYAEKLWSALTEAGREAGLAPCGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQHRNI 199
LR+ G+ + ++ P DA + + + K G ++G+ E +
Sbjct: 231 RDTLRLEAGMPLYGNELTT-SLTPFDAGLGRV--VKFEKEGDFVGRAALEQAAERARTAP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
R ++ +P +G ++ D IGT+ L
Sbjct: 288 PRVLVGLVAEGRRVPRAGYDVVADGTVIGTVTSGAPSPTLG 328
>gi|62181566|ref|YP_217983.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|167554236|ref|ZP_02347977.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168242844|ref|ZP_02667776.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168261781|ref|ZP_02683754.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194443469|ref|YP_002042307.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194451730|ref|YP_002047040.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|224584845|ref|YP_002638643.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|75505570|sp|Q57K60|GCST_SALCH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238690650|sp|B4TGX5|GCST_SALHS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238693618|sp|B4T550|GCST_SALNS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797879|sp|C0PY28|GCST_SALPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|62129199|gb|AAX66902.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194402132|gb|ACF62354.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194410034|gb|ACF70253.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205321513|gb|EDZ09352.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205338233|gb|EDZ24997.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205348976|gb|EDZ35607.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224469372|gb|ACN47202.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322716047|gb|EFZ07618.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 364
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDE-RFSIA 123
L ++ + R+ + + + + I ++ ++ + + F DE R ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVE 169
Query: 124 DV 125
+
Sbjct: 170 GM 171
>gi|213582699|ref|ZP_03364525.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 174
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159
>gi|150398506|ref|YP_001328973.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
gi|150030021|gb|ABR62138.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
Length = 789
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 94/295 (31%), Gaps = 56/295 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYEHGGMIDDGTLFRLGDK 516
Query: 64 TF-ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------------- 109
F + D L ++ R+ V ++ + + +
Sbjct: 517 NFRWIGGDDYSGIWLREQAEKKGFRAWVRSSTDQMHNIAVQGPKSRDILREIIWTAPRQS 576
Query: 110 -----------------FSNSSFIDERFSIADVLLHRTWGHNEKIAS------------- 139
F + + R L + + H + +
Sbjct: 577 TISELEWFRFAVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDAVWQAGEPHG 636
Query: 140 ----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
++ +RI G++ + DF T P +A + + +IG+E + ++
Sbjct: 637 MKPMGLEALDMVRIEAGLIFAHYDFDDQTD-PFEAGIGFTVPLKSKPDDFIGRE--ALMR 693
Query: 196 HRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ R+ + + ++ G + +IG + K +A+ARID
Sbjct: 694 RKESPRQLMVGLDVLANEAIGHGDCVHVGRAQIGVVTSATRSPVLGKTIALARID 748
>gi|66523500|ref|XP_394029.2| PREDICTED: aminomethyltransferase, mitochondrial-like [Apis
mellifera]
Length = 455
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ A FL+++ T+D+ L A + G IL +++K ED + L +
Sbjct: 137 RVSGRDATQFLESLTTSDLKNLGNGCAVLAVFTDENGGILDDLIVTKDGEDRYFLVSNAG 196
Query: 73 KR 74
+R
Sbjct: 197 RR 198
>gi|161616005|ref|YP_001589969.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|189039318|sp|A9N3N3|GCST_SALPB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|161365369|gb|ABX69137.1| hypothetical protein SPAB_03805 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 364
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER 119
L ++ + R+ + + + + I ++ ++ ++ E+
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTEQ 163
>gi|323309501|gb|EGA62712.1| Gcv1p [Saccharomyces cerevisiae FostersO]
Length = 143
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-TFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +D F + +
Sbjct: 5 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNA 64
Query: 72 SKRD 75
+
Sbjct: 65 GCAE 68
>gi|126725469|ref|ZP_01741311.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales
bacterium HTCC2150]
gi|126704673|gb|EBA03764.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales
bacterium HTCC2150]
Length = 1003
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 53/270 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +L R + T G ++ ++++I++DT++
Sbjct: 670 STLGKIIVKGPDAGKFLDMMYTNMMSSLKPGKCRYGLVCTENGFLMDDGVVARIDDDTYL 729
Query: 67 LEIDRSKRDSLIDKL-----------LFY-----KLRSNVII---------------EIQ 95
D + + Y + + + + ++
Sbjct: 730 CHTTTGGADRIHAHMEEWLQTEWWDWKVYTANVTEQFAQIAVVGPNARKVLEKLGGMDVS 789
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139
++W + R S + L + + +
Sbjct: 790 KEALPFMTWA-DGIIGGFDCRAYRISFSGELSYEIAVPASQGQAFWDALIEAGQEFGVMP 848
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + + T+ P D + IS K ++G+ R +
Sbjct: 849 YGTETLHILRAEKGFIMIGDE-SDGTVIPQDLNLQW--AISKKKEDFLGKRAQLRSHMAD 905
Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIEI 227
R + + + T + P G+ ++ D
Sbjct: 906 PDRWKLVGLETLDGSVLPDGAYVVADGTNA 935
>gi|254476777|ref|ZP_05090163.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp.
R11]
gi|214031020|gb|EEB71855.1| Glycine cleavage T-protein (aminomethyl transferase) [Ruegeria sp.
R11]
Length = 806
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 13/145 (8%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A L + + + +L +G+I L I ++ ED F L
Sbjct: 489 VEGPDAYALLDRLTANRMPQ-KVGSITLTHMLNRRGRIELETTIVRMAEDKFYLVCAAFF 547
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERFSI 122
L+D L ++ ++V + LS N E N++F
Sbjct: 548 EQRLLDHLAAHRNSADVTVRALSDTWGALSLNGPKSRDVLGACTEARLDNAAFRWLSAQE 607
Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL 147
D+ H+ W A ++ +
Sbjct: 608 IDIAGHKVWAFRMSYAGELG-WELH 631
>gi|163800500|ref|ZP_02194401.1| glycine cleavage system protein T2 [Vibrio sp. AND4]
gi|159175943|gb|EDP60737.1| glycine cleavage system protein T2 [Vibrio sp. AND4]
Length = 372
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 90/271 (33%), Gaps = 42/271 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A FL+ ++ D++ L R + QG I+ +++ + D
Sbjct: 54 SHMGQLRLIGDGAAAFLETLVPVDIVDLEEGKQRYAFFTNDQGGIMDDLMVANLG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++ + ++ I L + + ++ +Q + + ++ F+D
Sbjct: 113 VVVNAACKEQDIAHLQAHLPPSVELEVIDDRALLALQGPKAAEVLASLAPEVADMLFMDV 172
Query: 119 R---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
R A L G E + LR+
Sbjct: 173 RNVELLGVECIVSRSGYTGEDGYEISVPADKAVELALELTGKEEVEWIGLGARDSLRLEC 232
Query: 152 GIVDPNTDF----LPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMI 206
G+ D P + + +G + G +++ ++I+ +++ RKR +
Sbjct: 233 GLCLYGHDLNTTTTPVEASLLWGIQKVRRAGGEREGGFPGVDIILNQIETKDVARKRIGL 292
Query: 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236
+ T G + D +IG +
Sbjct: 293 VGQTKAPVREGVELFDADGNKIGVVTSGTAG 323
>gi|157148444|ref|YP_001455763.1| glycine cleavage system aminomethyltransferase T [Citrobacter
koseri ATCC BAA-895]
gi|166221545|sp|A8APB4|GCST_CITK8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157085649|gb|ABV15327.1| hypothetical protein CKO_04269 [Citrobacter koseri ATCC BAA-895]
Length = 364
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
L ++ + R+ + + + + I ++ ++ ++ E A
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQAKAATLFTEEQRKA 167
>gi|317476877|ref|ZP_07936120.1| glycine cleavage system T protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907052|gb|EFV28763.1| glycine cleavage system T protein [Bacteroides eggerthii 1_2_48FAA]
Length = 373
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|309365375|emb|CAP23358.2| hypothetical protein CBG_02210 [Caenorhabditis briggsae AF16]
Length = 885
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 56/279 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G+ A+ +LQ + +A+V P + + +G + +S++ + F +
Sbjct: 552 HLQGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTI 610
Query: 73 KRDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS 111
+++ ++ + + L++ V ++ I G+ +S N TF
Sbjct: 611 QQERVLVWMKKWQSILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFR 670
Query: 112 --------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HE 146
+ + L + N EKI K Y +
Sbjct: 671 CQEINIGMATGIRAISVTHCGELGWVIYIPNEVAQNVYEKILEAGKEYSLQHAGYYTLRQ 730
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LRI V D +T+ P + L + K +IG++ + R + ++ +
Sbjct: 731 LRIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVNKRFVQL 786
Query: 207 I-----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ TD P G IL D +G L
Sbjct: 787 LVDGHDKETDPWPQGGETILKDGRPVGLTTSAAYGFTLG 825
>gi|84516541|ref|ZP_01003900.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
gi|84509577|gb|EAQ06035.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
Length = 379
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 91/286 (31%), Gaps = 54/286 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F Q + D+ + + I G IL ++ ++ E+ F + +
Sbjct: 66 VEITGPDAAQFTQMLTCRDLSKMAVGQCKYILITNADGGILNDPILLRLAENHFWISLAD 125
Query: 72 SKRDSLIDKLLFYKLRS--NVIIEI----------------------QPINGVVLSWNQE 107
S ++ + S NV I + I + W +E
Sbjct: 126 S---DILLWAQGVAIHSGLNVTIREPDVSPLQLQGPKSGEIMKALFGEDILDLRYYWLRE 182
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151
+ + R + L + + + + T RI
Sbjct: 183 VELNGIPLVVSRTGWSSELGYEIYLRDGAKGDLLWETIMAAGMEFGLKPGHTSSIRRIEG 242
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ + D T P + D L + + +IG+ + RI+ + RK+ +I D
Sbjct: 243 GMLSYHAD-ADMTTNPFELGFDRLVNLDMEAD-FIGKAALRRIKDEGVSRKQIGLIIDGD 300
Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
L + I IG + V ALA+ + +
Sbjct: 301 PLAGPNTTFWAINLGGDTIGKVTSAVYSPRLKQNIALAMVSAEHAN 346
>gi|71275486|ref|ZP_00651772.1| Glycine cleavage system T protein [Xylella fastidiosa Dixon]
gi|71900647|ref|ZP_00682772.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1]
gi|170729389|ref|YP_001774822.1| glycine cleavage system aminomethyltransferase T [Xylella
fastidiosa M12]
gi|238687914|sp|B0U270|GCST_XYLFM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|71163786|gb|EAO13502.1| Glycine cleavage system T protein [Xylella fastidiosa Dixon]
gi|71729582|gb|EAO31688.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1]
gi|167964182|gb|ACA11192.1| Aminomethyltransferase [Xylella fastidiosa M12]
Length = 368
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
++ + R+ + + NV +E + ++ ++ + E
Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169
Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146
RF+ +V H RT E I ++
Sbjct: 170 KLGRFAALEVASHSKKTLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVMLDEGRN-FIGRNVLEQQKTNGVSRQMI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT E G + KA+ AR+ + + +
Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345
Query: 261 GVRVKASF 268
+ V+
Sbjct: 346 AIPVRVVK 353
>gi|290476413|ref|YP_003469318.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Xenorhabdus bovienii
SS-2004]
gi|289175751|emb|CBJ82554.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Xenorhabdus bovienii
SS-2004]
Length = 365
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 88/284 (30%), Gaps = 49/284 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ D+ L A + +L G ++ ++ +D +
Sbjct: 50 SHMTIVDLHGTGCRDFLRYLLANDITKLTEQGKALYTGMLNVSGGVIDDLIVYFFTDDFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + RD + + + V I ++ ++ S +++ A
Sbjct: 110 RMVVNSATRDKDLAWIQQHATNYPVEITVRDDLALIAVQGPNAQSKAQSLLNDEQKQAVA 169
Query: 126 LLHRTWGHNE----------------------KIASDIK--------------TYHELRI 149
+ +G + A+D LR+
Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIALPKEQAADFWQKLLAAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + TI P A M +IG+E + R + + +I
Sbjct: 230 EAGMNLYGQEM-DETISPLAANMGWTIAWKPEDRQFIGREALERQREVGT-EQLVGLIMR 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARI 244
+ G + D G + V +A+AR+
Sbjct: 288 EKGVLRGGLTVHFTDK-AGEMRSGVITSGTFSPTLGFSIALARV 330
>gi|254423925|ref|ZP_05037643.1| Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus
sp. PCC 7335]
gi|196191414|gb|EDX86378.1| Glycine cleavage T-protein (aminomethyl transferase) [Synechococcus
sp. PCC 7335]
Length = 601
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 106/316 (33%), Gaps = 67/316 (21%)
Query: 4 VYLSNQSFIK---VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
V L + S ++ V G A+ LQ + +V L + +L P G ++ ++ ++
Sbjct: 266 VALMDLSALRKFEVIGPDALALLQWTFSRNVAKLAVGQSAYGCLLNPHGGMIDDGIVFRL 325
Query: 61 EE-----------DTFILE---------------------------IDRSKRDSL----- 77
E D L+ R + L
Sbjct: 326 GEVAYRYIGNCDTDGLWLQKVAKEKGFTVTISNSSDRLHNLALQGPYSRDLLEPLVEIDD 385
Query: 78 ------IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-RFSIADVLLHRT 130
+++L F++ V + + ++ F+ + + +L +
Sbjct: 386 GWEIENLNELKFFRF---VTGTVGEVPVLLSRTGYTGELGYELFVHPNQGAQLWDVLMKA 442
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
G + + ++ RI G++ +F I P+ + G+ TK +IG+
Sbjct: 443 GGAYDLLPLGMQGLDRARIEAGLLAAGREF-NDLISPYQVGIGWSVGLK-TKPDFIGRAA 500
Query: 191 VSRIQHRNIIRKRPMIITGTDDLP------PSGSPILTDDIEIGTLGVVVGKKALAIARI 244
+ +I+ R +++ G + P G + GT V+ +++A+A++
Sbjct: 501 LEKIRDRPPFVGVGLLLEGNEVAGGGQCVYPVGDYWRVGHVTSGTFSPVL-NRSIALAQV 559
Query: 245 DKVDHAIKKGMALTVH 260
+ G L V
Sbjct: 560 --APEYAQAGTELEVG 573
>gi|218129902|ref|ZP_03458706.1| hypothetical protein BACEGG_01485 [Bacteroides eggerthii DSM 20697]
gi|217988012|gb|EEC54337.1| hypothetical protein BACEGG_01485 [Bacteroides eggerthii DSM 20697]
Length = 362
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FLQ + + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPHASDFLQKVTSNNVAALTPGKVQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|322383441|ref|ZP_08057222.1| glycine cleavage system aminomethyltransferase T-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321152273|gb|EFX45098.1| glycine cleavage system aminomethyltransferase T-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 348
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 89/287 (31%), Gaps = 50/287 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS+ I V G + FL ++T D+ + + + +L G ++ + K ED
Sbjct: 25 IDLSSAGKIVVKGDEHVEFLDGLVTKDIQFMEEERTAYTLLLREDGTVIDLVNLFK-NED 83
Query: 64 TFILEIDRSKRDSLIDKLL--FYKLRSNVIIEIQPINGVVLSWNQE-------------- 107
+ + K++ ++ L K + + I + ++ +
Sbjct: 84 SITIITASEKKEQVLAWLQENREKQENQIEITDISESHSLIGFEGPYAWKLAQQFLHFEI 143
Query: 108 ----------HTFSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTYHELRIN---- 150
T + + R + ++ E + + ++ E+ +
Sbjct: 144 SSLPFQSFALTTLQGTEIVLARTGVTGEYGYQLLFGRELRDAVLETMNSFKEIDLQDVDK 203
Query: 151 -------HGIVDPNTDFLPSTIFPH-DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
I P +F + ++ + K +IG+E + + + ++
Sbjct: 204 EALETAMLEIRHPYFEFKTGQELSLFEVCLEWF--VDFYKDAFIGKEFLEQQLEKGFSQR 261
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL------AIAR 243
T ++ I + IG + + L + R
Sbjct: 262 IVGFTTNKENPVSLDDEIYVGEHAIGKVIEMKESPGLNAKLGIGLLR 308
>gi|254466289|ref|ZP_05079700.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium
Y4I]
gi|206687197|gb|EDZ47679.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium
Y4I]
Length = 1010
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 82/299 (27%), Gaps = 71/299 (23%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + T G ++ ++++I+EDTF+
Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCTENGFLMDDGVVARIDEDTFLCHTTTGG 738
Query: 74 RDSLIDKL-----------LFYKLRSNVI-------------IEIQPINGVVLSWNQE-- 107
+ + + Y +NV ++ +
Sbjct: 739 AERIHGHMEEWLQTEWWDWKVYV--ANVTEQYAQIAVVGPKARKVLEKLNAAAGGGMDVS 796
Query: 108 -HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------- 146
+ D + D +R E + +
Sbjct: 797 KEALPFMEWRDGKIGSFDARAYRISFSGELSYEIAVAASEGQAFWDALMDAGKEFGVMPY 856
Query: 147 -------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
LR G + + T+ P D + +S K Y+G+ +R +
Sbjct: 857 GTETLHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKDDYLGKRAQARSHMTDP 913
Query: 200 IRKRPMIIT------GTDDLPPSGSPILTDDIE--IGTLG----VVVGKKALAIARIDK 246
R + + + D G I + IG + + +A+ +
Sbjct: 914 DRWQLVGLETVDGSVLPDGAYAVGEGINANGQRNMIGRVTSTYYSATLGRGIAMGLVKH 972
>gi|170724176|ref|YP_001751864.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
putida W619]
gi|169762179|gb|ACA75495.1| glycine cleavage system T protein [Pseudomonas putida W619]
Length = 360
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G A +LQ ++ DV L A S +L +G ++ + + E+ +
Sbjct: 50 SHMTVIDIDGADATVWLQRLLANDVARLAGVGKALYSPLLNEEGGVIDDLIAYRT-ENGY 108
Query: 66 ILEIDRSKRDSLIDKL 81
L + + R +++ L
Sbjct: 109 RLITNAATRANVLAWL 124
>gi|300858857|ref|YP_003783840.1| glycine cleavage system T protein [Corynebacterium
pseudotuberculosis FRC41]
gi|300686311|gb|ADK29233.1| glycine cleavage system T protein [Corynebacterium
pseudotuberculosis FRC41]
gi|302206564|gb|ADL10906.1| Glycine cleavage system T protein [Corynebacterium
pseudotuberculosis C231]
gi|302331119|gb|ADL21313.1| Glycine cleavage system T protein [Corynebacterium
pseudotuberculosis 1002]
gi|308276807|gb|ADO26706.1| Glycine cleavage system T protein [Corynebacterium
pseudotuberculosis I19]
Length = 377
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 68/314 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A FL A+I+ + LP A+ S I++ G I+ + ++ +D
Sbjct: 52 LSHMGEIRVSGPQAGDFLDYALISQ-LSVLPVNKAKYSMIVSEDGGIIDDLITYRLADDE 110
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE----------------- 107
F++ + + ++L V + + + +++
Sbjct: 111 FLVVPNAGNAAVVAEELRSRAAGYQVTVADESTDTALIAVQGPRSQALLLSLIDASADPD 170
Query: 108 ---------------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE----- 146
+ S + R + N+K + Y
Sbjct: 171 TADLISNMRYYSCGNAVIAGFSVLLARTGYTGEDGFELYISNDKAPALWDAIYQAGQDER 230
Query: 147 -------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQE-VV 191
LR+ G+ + + P DA + +L +S K G ++G+E +
Sbjct: 231 YSLLPCGLASRDSLRLEAGMPLYGNELSRD-LSPRDAGLGML--VSKKKEGDFVGKEALS 287
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE-IGTLGVVVG----KKALAIARIDK 246
+ H ++ + + G+ IL D +GT+ +A+A ++K
Sbjct: 288 APSTHTRVL---VGLASSERRAARHGAEILDGDGNVVGTVTSGQPSPTLGHPIALAYVEK 344
Query: 247 VDHAIKKGMALTVH 260
+ G LT
Sbjct: 345 --ELSEVGTELTAD 356
>gi|153807754|ref|ZP_01960422.1| hypothetical protein BACCAC_02037 [Bacteroides caccae ATCC 43185]
gi|149129363|gb|EDM20577.1| hypothetical protein BACCAC_02037 [Bacteroides caccae ATCC 43185]
Length = 361
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 48/301 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + +V L + + G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPNALAFLQKVTSNNVAALTPGKIQYTCFPNEDGGIVDDLLVYHYEPEKYLLVVNAAN 115
Query: 74 RDSLIDKLLFY-----------------KLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
D D + + ++ I+ +Q + V LS +TF F
Sbjct: 116 MDKDWDWCVSHNTEGAELENSSDNIGQLAVQGPKAILALQKLTDVDLSSIPYYTFKVGKF 175
Query: 116 IDER--------------------FSIADVLLHRTWGHNEKI---ASDIKTYHELRINHG 152
E S AD + + E+ + LR+ G
Sbjct: 176 AGEDNVIISNTGYTGAGGFELYFYPSAADTIWTAIFEAGEEFGIKPVGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K +I + ++ + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKN-FINRPMLEKQKAEGTTRKLVGFEMIDRG 293
Query: 213 LPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+P G ++ + +IG + K + + + I + + + G ++KA
Sbjct: 294 IPRHGYELVNQEGEKIGVVTSGTMSPTRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAV 353
Query: 268 F 268
Sbjct: 354 V 354
>gi|114564312|ref|YP_751826.1| glycine cleavage system aminomethyltransferase T [Shewanella
frigidimarina NCIMB 400]
gi|122298883|sp|Q07YC7|GCST_SHEFN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|114335605|gb|ABI72987.1| glycine cleavage system T protein [Shewanella frigidimarina NCIMB
400]
Length = 364
Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 3/163 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L I+ + + + +
Sbjct: 50 SHMTVVDVTGSDACAFLRKLLANDVAKLTVPGKALYGGMLDENAGIIDDLITYYLTDTHY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + RD + + +V++ +P ++ + + F E+ + +
Sbjct: 110 RVVVNSATRDKDLAWINKQAAAFDVVVTERPELAMIAVQGPNAKAKAATVFSAEQNAAVE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIF 166
+ + + Y E + + + L +
Sbjct: 170 GMKPFFGVQSASLFIATTGYTGEAGYEIIVPETEAEALWQALL 212
>gi|86360689|ref|YP_472577.1| aminomethyltransferase protein [Rhizobium etli CFN 42]
gi|86284791|gb|ABC93850.1| probable aminomethyltransferase protein [Rhizobium etli CFN 42]
Length = 341
Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/314 (17%), Positives = 103/314 (32%), Gaps = 73/314 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
+ + G AI L I T D+ + + + +L +G ++ + ++++L
Sbjct: 23 VHLVGPHAIAVLDYITTRDLTKIYPGRSVYATMLNDRGHFTDDCIVYRTGPNSWMLVHGS 82
Query: 68 -----EIDRSKR---------DSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
E+ + D L +D L Y + I +
Sbjct: 83 GSGHEEVVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 133
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 134 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMGIIPCCFSVLDM 193
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ +
Sbjct: 194 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLEGK 250
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + D ++G + + KK++AIAR+D VD A+
Sbjct: 251 ERFKIFGMLIDADGP-ADLGDEVFADGKKVGVITCPSYSSLTKKSMAIARLD-VDKAVH- 307
Query: 254 GMALTVHGVRVKAS 267
G L V G VKAS
Sbjct: 308 GTKLEVRGKTVKAS 321
>gi|308188008|ref|YP_003932139.1| aminomethyltransferase [Pantoea vagans C9-1]
gi|308058518|gb|ADO10690.1| aminomethyltransferase [Pantoea vagans C9-1]
Length = 365
Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 94/308 (30%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + E F
Sbjct: 50 SHMTIVDLTGPRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMSETFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--RFSIA 123
L ++ + R+ + + + + + + ++ + + E R ++A
Sbjct: 110 RLVVNSATREKDLAWITQHAEGYGITLTERDDLALIAVQGPQAQQKAQTLFSEEQRLAVA 169
Query: 124 DV------------------LLHRTWGHNEKIASDIKTY----------------HELRI 149
+ + + LR+
Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPAEEAANFWQRLLAAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ + P A M +IG+E + + R K +I
Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTVCWEPADRDFIGREALELQRERGT-EKLVGLILT 287
Query: 210 TDDLPPSGSPI--LTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHG 261
+ +G P+ D ++ + G ++A+AR+ + +
Sbjct: 288 EKGVLRNGQPVRFTDDQGQLQEGIITSGSFSPTLGYSIALARV-PASIGSTAIVEIRNRQ 346
Query: 262 VRVKASFP 269
+ V+ + P
Sbjct: 347 MPVQVTRP 354
>gi|294083913|ref|YP_003550670.1| putative sarcosine oxidase (subunit alpha) oxidoreductase protein
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292663485|gb|ADE38586.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 980
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 97/291 (33%), Gaps = 66/291 (22%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A F+ + T D L + R +L+ G IL + K+ ++ F++
Sbjct: 657 ISGRDAAAFIDLLYTNDFSNLEIGMGRYGIMLSEDGLILDDGVTFKLGDNHFMMSTSTGH 716
Query: 74 RDSLIDKLLFYKLRSNVI-----IEIQPI--------------NGVVLSWNQEHTFSNSS 114
D + + Y L V + I PI V+ + + + S +
Sbjct: 717 ADIVFRHME-YVL--QVECPDWQVWITPITSQWCNATICGPKARDVMAALDIDIDISAEA 773
Query: 115 F-------------------------------IDERFSIADVLLHRTWGHN-EKIASDIK 142
F I R + A L G + +
Sbjct: 774 FPFMGIRDAIVAGIPARICRVSFTGEVSFEISIWPRHAEAMWLRIMEAGEPFGIVPVGSE 833
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T H LR+ G + + +T P+D M + +S K IG+ V + R+
Sbjct: 834 TSHVLRVEKGFLSLGHE-ADATADPYDLGMGWI--MSRNKMHAIGRRSVDIRRSSGRPRR 890
Query: 203 RPMII--TGTDDLPPSGSPILTDDIEIGTLG-------VVVGKKALAIARI 244
+ + +L P G+PI + + + G V K+ +A+ +
Sbjct: 891 ELVGLLPESGGELVPEGAPITPNGARVASEGFVSACVWSVANKQVIALGLL 941
>gi|161506398|ref|YP_001573510.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|189039316|sp|A9MRH0|GCST_SALAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|160867745|gb|ABX24368.1| hypothetical protein SARI_04596 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 364
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + R+ + + + + I ++ ++ ++ E
Sbjct: 110 RLVVNSATREKDLAWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATLFTE 162
>gi|769682|gb|AAB05000.1| glycine cleavage T protein [Saccharomyces cerevisiae]
Length = 400
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISK-IEEDTFILEIDR 71
K+ G ++ FLQ + D LP S +L PQG ++ +I+K +E+ F + +
Sbjct: 72 KLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDENEFYIVTNA 131
Query: 72 SKRD 75
+
Sbjct: 132 GCAE 135
>gi|307946494|ref|ZP_07661829.1| aminomethyltransferase [Roseibium sp. TrichSKD4]
gi|307770158|gb|EFO29384.1| aminomethyltransferase [Roseibium sp. TrichSKD4]
Length = 426
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 63/284 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL-EID 70
I++ G A L + T V + G ++ ++ ++ D F + ++D
Sbjct: 106 IEISGPDAETLLNMVFTRSVSKVKPGRCSYQFACYHDGGMITDGVLLRLSPDRFWMAQVD 165
Query: 71 RSKRDSLIDKLLFYKLRS---NVIIEI-------------QPINGVVLSWNQEHTF---- 110
+YK + +V I + VL F
Sbjct: 166 GDL-------FSWYKAHAEGLDVKIHDPNVWVSQIQGPRSLDLLAAVLDGPMPDPFRYFD 218
Query: 111 ------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------------YHE 146
+ + R + L + + I +
Sbjct: 219 CAEVSIAGQTCWISRSGFTNELGWEVYLLPDTDIQAIGDRIMEVGAVFDILLTGTPVFRA 278
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI G+++ +DF T P +A + + ++G++ + + R M
Sbjct: 279 RRIEAGLLNAGSDFGAETT-PFEAGLGGF--VEFDDRDFVGRK--ALEEACKSCRTWGMR 333
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDK 246
+TG + G + D ++G + + I R+D
Sbjct: 334 VTG--GVAQLGRVMTIDGKDVGQVCSSGYSPYQGCGVCIVRMDD 375
>gi|99081095|ref|YP_613249.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040]
gi|99037375|gb|ABF63987.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040]
Length = 799
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 77/267 (28%), Gaps = 45/267 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FL + + + P +A+L G+ + ++ D +
Sbjct: 485 SSFGKIDVTGPDSEAFLLHVCSGHMARAP-GSVIYTAMLNEHGRFESDITVHRLATDHYR 543
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---------------------- 104
L + + + LL + +V I +
Sbjct: 544 LFVGTAAIKRDMAWLLRHSREFDVKICDTTEDFATFGLMGPEAMRIARDLGAAELASLGY 603
Query: 105 --NQEHTFSNSSFIDERFSIADVLLHRT-------------WGHNEKIASDIKTYHELRI 149
+ E + R S + + +RI
Sbjct: 604 FKHGEAMIAGHPVRAARLSYVGEAGWEITCKTTSAQEVYTALLDAGATPAGLYAQTSMRI 663
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + S + P + + G +L K G +IG + + ++ +++ + ++
Sbjct: 664 EKGFCAMGHEL-DSDVSPLEVGL----GFALRKSGGFIGAQALEEMKKKSLNHQIVSLLF 718
Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVVV 234
D+ P G P+ IG
Sbjct: 719 EEVDVVPLGHEPVSARGDIIGHTTSCA 745
>gi|89067482|ref|ZP_01154995.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
gi|89047051|gb|EAR53105.1| aminomethyl transferase family protein [Oceanicola granulosus
HTCC2516]
Length = 365
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 103/300 (34%), Gaps = 48/300 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A Q + D+ + R + G ++ ++ K+ +D F L I
Sbjct: 65 VQLEGPDAARLAQVLTPRDIAGMEPGQGRYVPLCDHDGWLINDPVLLKLADDRFWLSIAD 124
Query: 72 S--------------------------------KRDSLIDKLLFYKLR--SNVIIEIQPI 97
S K + ++ LL +R E + +
Sbjct: 125 SDIGLWATAIGRERGLDVRVSEPDVAPLAVQGPKAEDVVAALLGEAVREIRPFRFEPREL 184
Query: 98 NGVVL-----SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
+G+ L W+++ F D R ++A R G I RI G
Sbjct: 185 DGIPLLLARSGWSKQGGFELY-LTDTRRALALWARVREAGQPFGIGPGAPN-DVERIESG 242
Query: 153 IVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITG 209
++ D T P++ + + +IG++ ++ + + R+R +++ G
Sbjct: 243 LISYGADMRRQTHPATPYEMGFGGMVDLGHD---FIGRDALAPLADQTPPRRRVGVVVEG 299
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKASF 268
P P+ D E+G + +V K L + + ++ G+++ V A
Sbjct: 300 DPPTPGHPVPLERDGAEVGFVSELVYSKRLGRTIAVGLLQSGVEDGLSVRVGETLYPAHL 359
>gi|300896199|ref|ZP_07114748.1| glycine cleavage system T protein [Escherichia coli MS 198-1]
gi|300359933|gb|EFJ75803.1| glycine cleavage system T protein [Escherichia coli MS 198-1]
Length = 387
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFSEDFF 132
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182
>gi|16761836|ref|NP_457453.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16766356|ref|NP_461971.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|29143323|ref|NP_806665.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|56415001|ref|YP_152076.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|167994120|ref|ZP_02575212.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168231162|ref|ZP_02656220.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168236115|ref|ZP_02661173.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168463774|ref|ZP_02697691.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168823052|ref|ZP_02835052.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194470268|ref|ZP_03076252.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735702|ref|YP_002116003.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251637|ref|YP_002147969.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263429|ref|ZP_03163503.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197363930|ref|YP_002143567.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|200388887|ref|ZP_03215499.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204927977|ref|ZP_03219177.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|213162880|ref|ZP_03348590.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213427306|ref|ZP_03360056.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646976|ref|ZP_03377029.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213865007|ref|ZP_03387126.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238909855|ref|ZP_04653692.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|289811788|ref|ZP_06542417.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|289823833|ref|ZP_06543445.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|54037177|sp|P64223|GCST_SALTI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|54041303|sp|P64222|GCST_SALTY RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|61213256|sp|Q5PJG4|GCST_SALPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226697521|sp|B5F5I0|GCST_SALA4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238690722|sp|B5BFM0|GCST_SALPK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238693698|sp|B4TV24|GCST_SALSV RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|25328330|pir||AE0873 aminomethyltransferase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16421606|gb|AAL21930.1| glycine cleavage complex protein T [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504138|emb|CAD02885.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138957|gb|AAO70525.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56129258|gb|AAV78764.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|194456632|gb|EDX45471.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711204|gb|ACF90425.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633701|gb|EDX52115.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197095407|emb|CAR60966.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197215340|gb|ACH52737.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241684|gb|EDY24304.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290889|gb|EDY30243.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199605985|gb|EDZ04530.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322299|gb|EDZ07496.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205327990|gb|EDZ14754.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334487|gb|EDZ21251.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205340621|gb|EDZ27385.1| glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|261248187|emb|CBG26023.1| Glycine cleavage system T protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995211|gb|ACY90096.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159611|emb|CBW19130.1| Aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312914077|dbj|BAJ38051.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320087486|emb|CBY97251.1| aminomethyltransferase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321225729|gb|EFX50783.1| Aminomethyltransferase glycine cleavage system T protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322613454|gb|EFY10395.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621046|gb|EFY17904.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322624110|gb|EFY20944.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322628151|gb|EFY24940.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633270|gb|EFY30012.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636152|gb|EFY32860.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322639490|gb|EFY36178.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647577|gb|EFY44066.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322648761|gb|EFY45208.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653816|gb|EFY50142.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657922|gb|EFY54190.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664025|gb|EFY60224.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322668964|gb|EFY65115.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673042|gb|EFY69149.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677967|gb|EFY74030.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681143|gb|EFY77176.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687927|gb|EFY83894.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323131411|gb|ADX18841.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323194877|gb|EFZ80064.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196628|gb|EFZ81776.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323202672|gb|EFZ87712.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323207841|gb|EFZ92787.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212607|gb|EFZ97424.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214910|gb|EFZ99658.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222640|gb|EGA07005.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323225080|gb|EGA09332.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230602|gb|EGA14720.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323235047|gb|EGA19133.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323239086|gb|EGA23136.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244556|gb|EGA28562.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323247171|gb|EGA31137.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323253346|gb|EGA37175.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323256347|gb|EGA40083.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323262477|gb|EGA46033.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267427|gb|EGA50911.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323269169|gb|EGA52624.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 364
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159
>gi|68473519|ref|XP_719084.1| hypothetical protein CaO19.5519 [Candida albicans SC5314]
gi|46440885|gb|EAL00186.1| hypothetical protein CaO19.5519 [Candida albicans SC5314]
Length = 394
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK A LQ I D+ LP + S +L G ++ +I+K ED + + +
Sbjct: 73 ISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNAGC 132
Query: 74 RDSLIDKLL 82
R+ + +
Sbjct: 133 REKDVKFIK 141
>gi|91762978|ref|ZP_01264943.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718780|gb|EAS85430.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 452
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 88/327 (26%), Gaps = 77/327 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
I+V G A F +IT D + AR + G +L ++ +I +D F
Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRISKDEFWFSLSD 161
Query: 67 ----------------------LE-IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103
++ + L+ + V ++ P G+
Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVCPVQIQGPKSKALMKDLIGDQVDLDNMPFYGLA-- 219
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTW-GHNEKIASDIKT----------------YHE 146
E S + + + + + K A D+ H
Sbjct: 220 ---EAKVGGRSCVISQSGFSGEAGYEIYLREATKYADDMWNAVLEAGKKHSLMVIAPAHH 276
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIR 201
RI GI+ D P + +S K Y+G+ + ++
Sbjct: 277 RRIQAGILSWGQDMDHQH-NPFQCNLGYQVSLSGKGEWNKKADYVGKAALEKMGADLKAG 335
Query: 202 KRPMIITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIAR 243
++P + L G PI + +G + A+
Sbjct: 336 QKPYKLQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKGQNIAMGYVP 394
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFPH 270
D +A G G + K P
Sbjct: 395 FDGTLNA--NGFPKGKVGTKYKVHLPA 419
>gi|332989922|gb|AEF08905.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 364
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPYAIDITVRDDLSLIAVQGPNAQEKAATL 159
>gi|328958050|ref|YP_004375436.1| glycine cleavage system aminomethyltransferase T [Carnobacterium
sp. 17-4]
gi|328674374|gb|AEB30420.1| glycine cleavage system aminomethyltransferase T [Carnobacterium
sp. 17-4]
Length = 370
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FL ++T DV L A+ +AI+ G + +I K+++ ++
Sbjct: 53 SHMGEILVKGTGSEGFLNHLLTNDVSKLTVGQAQYNAIVYENGGTIDDLIIFKLDKLGYL 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN-GVVLSWNQEHTFSNSSFIDERFS 121
+ + S + + + + +VI+E + + G++ D+ S
Sbjct: 113 VTPNASNTEKVFQWMKKEIV-EDVILENRSEDIGLIALQGPYAERILQKLADDDLS 167
>gi|325185478|emb|CCA19961.1| unnamed protein product [Albugo laibachii Nc14]
Length = 412
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 105/319 (32%), Gaps = 69/319 (21%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ +++ G FL++++ AD+ A+ S + G I+ +I+K
Sbjct: 81 SLFDVSHMGQLRITGHDREVFLESLVVADLAAAEIGEAKLSLLTNQNGGIIDDCVITKY- 139
Query: 62 EDTFILEIDRSKRDSLIDKLLFYK----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
ED F + ++ + + + ++ + + IEI +V + D
Sbjct: 140 EDHFYVVVNAGNKGNDLQH--MHRELEQFKGDANIEILEDRALVALQGPGAVD---ALRD 194
Query: 118 ERFSIADV------------------------------------------------LLHR 129
E F+ D +
Sbjct: 195 EMFASVDFEELEFMNGLYTSITSSSALKGLDVILTRCGYTGEDGFELSIPSAHVEQFTRQ 254
Query: 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQ 188
++ + + + LR+ G+ D P T P +A + +G + G
Sbjct: 255 LLRYDSVLEAGLGARDSLRLEAGLCLHGQDITP-TTTPIEATLAWTIAKRRREQGGFPGH 313
Query: 189 EVVS-RIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIA 242
++ +++++ +KR + +G+ + ++ +G + L +A
Sbjct: 314 AIIMDQLKNKTFSQKR-VGFGSEGTTFRTGTTLYDSNGRTVGKVTSGTFSPCLQSPIGMA 372
Query: 243 RIDKVDHAIKKGMALTVHG 261
IDK A K G + G
Sbjct: 373 YIDK--DAAKIGSEVRAKG 389
>gi|149918878|ref|ZP_01907364.1| glycine cleavage system T protein [Plesiocystis pacifica SIR-1]
gi|149820252|gb|EDM79669.1| glycine cleavage system T protein [Plesiocystis pacifica SIR-1]
Length = 367
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G A+ +Q ++T DV L A +A P G I+ ++ +
Sbjct: 52 SHMGEIDFAGPRALEAVQRLVTNDVSKLVDGQALYTATCRPSGGIVDDCIVYRRGAQELR 111
Query: 67 LEIDRSKRDSLIDKLLFYK 85
+ ++ S +
Sbjct: 112 IVVNASNIAKDEAHFREHV 130
>gi|126466007|ref|YP_001041116.1| glycine cleavage system aminomethyltransferase T [Staphylothermus
marinus F1]
gi|126014830|gb|ABN70208.1| aminomethyltransferase [Staphylothermus marinus F1]
Length = 370
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 61/295 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI-ARGSAILTPQGKILLYFLISKIEEDTF 65
S+ +++ G +Q I T D+ + + + L ++ ++ KI ++ +
Sbjct: 50 SHMGRVRLRGPDVFELIQYIYTKDLSKVKPGWMSGPTLALNQWARVKDDEMLYKISDEEW 109
Query: 66 ILEIDRSKRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQEHT--------FS 111
+L + R+ ++ L Y V+IE +++ +
Sbjct: 110 LLVPNALVREKMLSYLKSIIDSHQY----KVVIEDLTHKYSMIAVQGPKSPNIMEKIGLK 165
Query: 112 NSS------------------FIDERFSIADVLLHRTWGHNEKIA-------------SD 140
++ F+ R WG + IA +
Sbjct: 166 EAADLKPLQFITNIKLNDIKLFLVSRSGWTGEDGFEIWGEHSSIAKLLDILVKEGVKPAG 225
Query: 141 IKTYHELRINHGIVDPNTDFLPS-TIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRN 198
I LR+ G V + ++ T +P + L I+ +K Y+G+E + R R
Sbjct: 226 IIARDTLRMEMGFVLGDHEYGEDPTKYPCVISLRYGLGAITWSKKGYVGEEAL-RAYLRE 284
Query: 199 IIRKRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGK----KALAIARID 245
+R M I + +P +P+ +D +G + + +A A ID
Sbjct: 285 GVRWIRMGIKMSKKNARIIPREHTPVYVEDQVVGWVTSGTYSPILRRGIAQAYID 339
>gi|294955718|ref|XP_002788645.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904186|gb|EER20441.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 394
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 88/273 (32%), Gaps = 43/273 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ ++V GK + F++++ D+ L R + I TPQ I+ +I E
Sbjct: 70 SLFDVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-E 128
Query: 62 EDTFILEIDRSKRDSLIDKLL----------------------------FYKLR------ 87
D + ++ S + + + L+
Sbjct: 129 GDHLYVVLNASNTEKDMKHIETALADFDGDVSLEPHPEASLIALQGPKAMEVLQPMLAED 188
Query: 88 -SNVII------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD 140
+ V + + V ++ + + + + + +
Sbjct: 189 LTKVPFMVSFATTVNGVPNVTVTRCGYTGEDGFELSIPTSEGVNAIAEKMIENEAVLPAG 248
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LRI G+ D +T AL ++ + + G EV R + +
Sbjct: 249 LGARDTLRIEAGLCLYGHDISETTTIAEAALSWTVSKRRRNEANFPGVEVFLRQVKKGGV 308
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ + + T GS IL TD +IG +
Sbjct: 309 DRKRVGLLVTGPPAREGSTILDTDSNKIGEVTS 341
>gi|159904360|ref|YP_001551704.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9211]
gi|159889536|gb|ABX09750.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9211]
Length = 359
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 98/296 (33%), Gaps = 61/296 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62
S+ + + GKS LQ ++ +D+ + A + +L G I+ +I +
Sbjct: 33 SHMGVLLIQGKSVKDNLQKLVPSDLYQIGSGEACYTVLLNKHGGIIDDLIIYDLGVNDQN 92
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQE-----------HT 109
++ +L I+ S DS + + L++ + I +GV+L+ T
Sbjct: 93 IESLMLVINASCSDSDTNWIKA-NLQNQSISINDAKKDGVLLAVQGPDSEKSLNKIFGST 151
Query: 110 FSNSSFIDERFS------------------------------------IADVLLHRTWGH 133
F S RF + L
Sbjct: 152 FEESISNLPRFGHRKLKLQFQRTKKPCPVFIAKTGYTGEEGYELLLEKEMGITLWEELVK 211
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ + LR+ + D P +A + L + + K +IG+E + +
Sbjct: 212 SGVTPCGLGARDTLRLEAAMHLYGNDL-NEETTPFEAGLGWLVHLEMPK-TFIGREALEK 269
Query: 194 IQHRNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARI 244
+ + + ++I + G ++ ++ IG + KA+A+A I
Sbjct: 270 QIEKGVSKLLVGLVIQDERAIARKGYEVIYENKPIGKITSGSWSPTLEKAIALAYI 325
>gi|71898613|ref|ZP_00680783.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1]
gi|71731560|gb|EAO33621.1| Glycine cleavage system T protein [Xylella fastidiosa Ann-1]
Length = 368
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 50/308 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I + G P L+ ++ V L A S +L PQG ++ ++ + ED F
Sbjct: 50 SHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLILYYLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------- 118
++ + R+ + + NV +E + ++ ++ + E
Sbjct: 110 RFIVNAATREKDLAWINTQASAFNVRVEERADLAMLAVQGPAARAQVTNLLAETHRDAVE 169
Query: 119 ---RFSIADVLLH--------RTWGHNE-------KIASDIKTYHE-------------- 146
RF+ +V H RT E I ++
Sbjct: 170 KLGRFAALEVASHSKKPLFISRTGYTGEDGFEILLPQEETITLWNALLKTGVKPIGLGAR 229
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D + P++A + + + +IG+ V+ + + + R+
Sbjct: 230 DTLRLEAGMNLYGQDM-DEQVSPYEAALGWTVILDEGRN-FIGRNVLEQQKTNGVSRQMI 287
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
++ + G +LT E G + KA+ AR+ + + +
Sbjct: 288 GLLMDEKGVLRHGQKVLTAQGE-GHILSGTFSPTLNKAIGFARV-PAGKPSEVRVNIRDR 345
Query: 261 GVRVKASF 268
+ V+
Sbjct: 346 EIPVRVVK 353
>gi|257387939|ref|YP_003177712.1| glycine cleavage system aminomethyltransferase T [Halomicrobium
mukohataei DSM 12286]
gi|257170246|gb|ACV48005.1| glycine cleavage system T protein [Halomicrobium mukohataei DSM
12286]
Length = 363
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 95/290 (32%), Gaps = 51/290 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE---ED 63
S+ I V G A +Q + T DV L A +AI G +L ++ ++ E
Sbjct: 51 SHMGEIVVSGTEATGLMQRLTTNDVTDLRPGQAHYAAITREDGVMLDDTVVYRLPEAVEG 110
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQPINGVVLSWNQEHTFS-----NSSFI 116
++ + + + + Y + I+E + +++ S + +
Sbjct: 111 EYLFIPNAGHDEQMATRWREYADERDLDAIVENRTTEYGLIALQGPDAPSLLADETTLSL 170
Query: 117 DE--RFSIADVLLH---------------------------RTWGHNEKIASDIKTYHEL 147
DE RF IA + WG + + L
Sbjct: 171 DELGRFEIATATVAGVETLVATTGYTGEAGYELVVPWDETETVWGALDCQPCGLGARDTL 230
Query: 148 RINHGIVDPNTDFLPST--IFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
R+ G + DF P P++A + + + ++G++ + + K
Sbjct: 231 RLEMGFLLSGQDFDPEDDPRNPYEAGIGFVVDLDTE---FVGRDALEGVDVEGPAEKLTG 287
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVD 248
+ +P +G + T + +GT+ ALA D ++
Sbjct: 288 LSLIDRGVPRAGYDVTTPNGDRVGTVTSGTMSPTLGEPIALAYIDTDYIE 337
>gi|15963852|ref|NP_384205.1| putative aminomethyltransferase protein [Sinorhizobium meliloti
1021]
gi|15073027|emb|CAC41486.1| Putative aminomethyltransferase [Sinorhizobium meliloti 1021]
Length = 351
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 73/313 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+ + G AI L I T D+ + + + +L +G ++ + ++++L
Sbjct: 33 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYACMLNDRGHFTDDCIVYRTGPNSWMLVHGS 92
Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
D L +D L Y + I +
Sbjct: 93 GSGYEEIVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 143
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 144 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMIWDRIVAEGKEMGIIPCCFSVLDM 203
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ R
Sbjct: 204 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGR 260
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + + ++G + + K+++AIAR+D VD A++
Sbjct: 261 ERFKIFGMLIDADGP-ADLGDEVYAEGKKVGVITCPSYSTLTKRSMAIARLD-VDKAVQ- 317
Query: 254 GMALTVHGVRVKA 266
G L VHG + A
Sbjct: 318 GAKLEVHGKNLNA 330
>gi|218706410|ref|YP_002413929.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
UMN026]
gi|293406403|ref|ZP_06650329.1| gcvT [Escherichia coli FVEC1412]
gi|298382139|ref|ZP_06991736.1| aminomethyltransferase [Escherichia coli FVEC1302]
gi|226711372|sp|B7N7E8|GCST_ECOLU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218433507|emb|CAR14410.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
UMN026]
gi|291426409|gb|EFE99441.1| gcvT [Escherichia coli FVEC1412]
gi|298277279|gb|EFI18795.1| aminomethyltransferase [Escherichia coli FVEC1302]
Length = 364
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|332991991|gb|AEF02046.1| glycine cleavage system aminomethyltransferase T [Alteromonas sp.
SN2]
Length = 359
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +LQ ++ DV L A S +L +G ++ ++ +E +
Sbjct: 50 SHMTIVDVKGTQAKAYLQHLLANDVAKLQIKGKALYSGMLNEEGGVVDDLIVYYFDETNY 109
Query: 66 ILEIDRSKRDSLIDKLL 82
L ++ + R+ ++ L
Sbjct: 110 RLVVNSATREKDMNWLN 126
>gi|224369594|ref|YP_002603758.1| GcvT [Desulfobacterium autotrophicum HRM2]
gi|223692311|gb|ACN15594.1| GcvT [Desulfobacterium autotrophicum HRM2]
Length = 416
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 39/88 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + V G A+ LQ T D+ +L AIL QG + ++ I F+
Sbjct: 54 SHMACVTVRGNDALALLQRCHTRDLASLAQGRCVYGAILDEQGHTVDDAIVYCIGPGDFM 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEI 94
+ ++ ++ L + + +V+I+
Sbjct: 114 VCVNAGMGATVTAHLAGHGKKLDVVIKD 141
>gi|326572537|gb|EGE22526.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis CO72]
Length = 366
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G +A FLQ ++ DV L A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFAGKALYSAMLNDDGGVIDDLIVYRMNEDE 110
>gi|271499200|ref|YP_003332225.1| glycine cleavage system T protein [Dickeya dadantii Ech586]
gi|270342755|gb|ACZ75520.1| glycine cleavage system T protein [Dickeya dadantii Ech586]
Length = 366
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F
Sbjct: 50 SHMTIVDLRGARVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + +V I + ++ +
Sbjct: 110 RLVVNSATREKDLAWITEHAASFHVAITEREDLSLIAVQGPQA 152
>gi|311111988|ref|YP_003983210.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931]
gi|310943482|gb|ADP39776.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931]
Length = 372
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 98/291 (33%), Gaps = 64/291 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++ G A FL A+++ + L A+ S + +G ++ + ++ ++
Sbjct: 50 LSHMGEFRITGPDAAAFLDYALVSN-MSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108
Query: 65 FILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID 117
F++ + + D ++ ++L + +V + + +++ E + D
Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF----DVKFVNESDDTSLIAVQGPRAEEILLAAGASD 164
Query: 118 ER--------------FSIADVLLHRTWGHNE-------KIASDIKTYHE---------- 146
E + DVLL RT E A+ +K +
Sbjct: 165 EDAVRELKYYASVPVTIAGVDVLLARTGYTGEDGFELFVPNANAVKLWDALAAAGESFGL 224
Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
LR+ G+ + I P ++ + L I+L K + V R
Sbjct: 225 TPAGLAARDSLRLEAGMPLYGHELGLD-ITPFESGLGRLVEIALEKKTV---DFVGRTAL 280
Query: 197 RNIIR----KRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVGKKALAI 241
+ + + + + P IL + +IG + + L
Sbjct: 281 TELAKSPSERILVGLKAQAKRPARAGSILVDAEGNQIGEVTSGIPSPTLGY 331
>gi|242240714|ref|YP_002988895.1| glycine cleavage system aminomethyltransferase T [Dickeya dadantii
Ech703]
gi|242132771|gb|ACS87073.1| glycine cleavage system T protein [Dickeya dadantii Ech703]
Length = 366
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A SA+LTP ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTREFLRYLLANDVARLTQPGKALYSAMLTPSAGVIDDLIVYFLREDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106
L ++ + R+ + + +V I + ++
Sbjct: 110 RLVVNSATREKDLAWIREQAAPFSVEIRERDDLSLIAVQGP 150
>gi|222479665|ref|YP_002565902.1| glycine cleavage system T protein [Halorubrum lacusprofundi ATCC
49239]
gi|222452567|gb|ACM56832.1| glycine cleavage system T protein [Halorubrum lacusprofundi ATCC
49239]
Length = 390
Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I+V G A + + T DV L ++ +AI G +L ++ ++ +
Sbjct: 51 SHMGEIEVSGPDATRLMNRLTTNDVTALDPGDSQYAAITNEDGVMLDDTVVYRLPDG 107
>gi|313159459|gb|EFR58822.1| aminomethyltransferase [Alistipes sp. HGB5]
Length = 366
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ LQ I T DV L + + + +G I+ L+ +++ +T++
Sbjct: 49 SHMGEIWVKGPKALGLLQRITTNDVSKLYDGKVQYTCMPNGRGGIVDDILVYRVDAETYM 108
Query: 67 LEIDRSKRD 75
L ++ + +
Sbjct: 109 LCVNAANIE 117
>gi|254510526|ref|ZP_05122593.1| Glycine cleavage T-protein [Rhodobacteraceae bacterium KLH11]
gi|221534237|gb|EEE37225.1| Glycine cleavage T-protein [Rhodobacteraceae bacterium KLH11]
Length = 816
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 91/320 (28%), Gaps = 68/320 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLT----LPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ ++V G A +L + +P S L +G I I+++
Sbjct: 491 MSSFGKLRVEGPDATRYL-----NYIAGGEYDVPVGKIVYSQFLNRRGGIEADVTITRLA 545
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW----------------- 104
+ +++ + R D++ + R + + I + +
Sbjct: 546 GNIYLVVTPAATRY--HDQVWMERHRGDFNVTITDVTAAEATLAVMGPQSRALLEAVSPN 603
Query: 105 -----------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------ 147
QE R + L + ++ +T +E
Sbjct: 604 DFTNAVNPFGTAQEIEIGMGLARVHRVTYVGELGWEVYVSSDMAGHVFETLYEAGQDMGL 663
Query: 148 -----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
RI G D DA + + K +IG++ V R +
Sbjct: 664 KLCGMHMMDTCRIEKGFRHFGHDITCEDHV-IDAGLGF--AVKTDKPDFIGRDAVLRRKE 720
Query: 197 RNIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARI--DKV 247
+ +T + L PIL D +G L G L +
Sbjct: 721 TGPQSRMLQFRLTDPEPLLYHNEPILRDGEYVGYLASGAYGHHLGGAIGLGYVPCEGETA 780
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ + V GV+VKA
Sbjct: 781 SDVLASTYEIDVCGVKVKAE 800
>gi|116053363|ref|YP_793687.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296392072|ref|ZP_06881547.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
aeruginosa PAb1]
gi|115588584|gb|ABJ14599.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 360
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E+ +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-ENGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|110667715|ref|YP_657526.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109625462|emb|CAJ51889.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
Length = 852
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +++ S I V G A +LQ + + DV + R S +L G IL + ++
Sbjct: 528 SMFDMTSFSSIIVEGVDAESYLQRMCSNDVA-IDPGDVRYSLLLNEGGGILADITVVGLD 586
Query: 62 EDTFIL 67
++ +++
Sbjct: 587 DERYMV 592
>gi|32563613|ref|NP_492730.2| hypothetical protein Y106G6H.5 [Caenorhabditis elegans]
gi|25005037|emb|CAB63337.2| C. elegans protein Y106G6H.5, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 855
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 93/278 (33%), Gaps = 56/278 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A+ +LQ + +A+V P + + +G + +S++ E F + +
Sbjct: 523 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQ 581
Query: 74 RDSLIDKLLFY--KLRSNVIIEI-------------------QPINGVVLSWNQEHTFS- 111
++ ++ + + L++ V ++ I G+ +S N TF
Sbjct: 582 QERVLVWMKKWQAILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRC 641
Query: 112 -------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147
+ + L + N EKI K Y +L
Sbjct: 642 QEINIGMATGIRAISVTHCGELGWVIYVPNEVAQNVYEKILDAGKEYSLQHAGYYTLRQL 701
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
RI V D +T+ P + L + K +IG++ + R + ++ ++
Sbjct: 702 RIEKFYVYWGQDI-NATVTPVECG--RLFRVDFKKD-FIGKKALEEQVERGVSKRFVQLL 757
Query: 208 -----TGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
TD P G IL D +G L
Sbjct: 758 VDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTLG 795
>gi|84684671|ref|ZP_01012571.1| sarcosine oxidase, alpha subunit family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84667006|gb|EAQ13476.1| sarcosine oxidase, alpha subunit family protein [Rhodobacterales
bacterium HTCC2654]
Length = 1004
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 84/281 (29%), Gaps = 61/281 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP R + T G + ++++I E T++
Sbjct: 669 STLGKILVTGPDAGKFLDMLYTNVMSSLPVGKCRYGLMCTENGFVTDDGVVARIGEQTWL 728
Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLRSNVIIEIQPING 99
D + + Y K R V +E
Sbjct: 729 CHTTTGGADRIHGHMEDWLQCEWWDWKVYTANLTEQYAQVAVAGPKAR-KV-LEALGGMD 786
Query: 100 V------VLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASD--- 140
V ++W + T + R S L W + +
Sbjct: 787 VSKEAMPFMTWA-DGTLAGIPARVYRISFTGELSYEIAVPANRGAELWAKVAEAGAAHGI 845
Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ H +R G V + T+ P D M + IS K Y+G+ R
Sbjct: 846 QPYGTEAMHIMRAEKGFVMIGDE-TDGTVIPQDLNMGWI--ISKKKTDYLGKRAQERSHM 902
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK 237
+ R R + + D GS I +G G++
Sbjct: 903 ASPDRWRLVGLETLD-----GSVIPDGAYAVGEGFNANGQR 938
>gi|317049389|ref|YP_004117037.1| glycine cleavage system T protein [Pantoea sp. At-9b]
gi|316951006|gb|ADU70481.1| glycine cleavage system T protein [Pantoea sp. At-9b]
Length = 365
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLQGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFMTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123
L ++ + R+ + + + + + + + ++ + S +R ++A
Sbjct: 110 RLVVNSATREKDLAWIGEHAQQYGITLTERDDLALIAVQGPQAQQKAQSLFSAAQRDAVA 169
Query: 124 DV 125
+
Sbjct: 170 GM 171
>gi|254428321|ref|ZP_05042028.1| glycine cleavage system T protein [Alcanivorax sp. DG881]
gi|196194490|gb|EDX89449.1| glycine cleavage system T protein [Alcanivorax sp. DG881]
Length = 363
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 45/278 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + + G A +L+ ++ DV + A + +L G ++ ++ K +++ +
Sbjct: 54 SHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYK-QDNGYR 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI-DERFSI--- 122
L ++ + R++ +D + V I +P ++ + + + R
Sbjct: 113 LVVNCATRETDLDWMEKQAGGFAVDIHERPELAMLAIQGPKAREILAELLSGARAEAVSS 172
Query: 123 ---------ADVLLHRTWGHNE-------KIASDIKTY----------------HELRIN 150
D ++ RT E A + + LR+
Sbjct: 173 LKIFAFAQDGDWMIARTGYTGEDGVEIMLPNADAVTLWGQLLAAGVAPIGLGARDTLRLE 232
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D +TI P +A M ++ + +IG++ + Q + +I+ G
Sbjct: 233 AGLNLYGNDM-DNTITPWEANMGWTVMLNDRE--FIGRQPLLNQQKNGHGEQVGLILEGK 289
Query: 211 DDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI 244
L +L + E GT +GK +A+AR+
Sbjct: 290 GVLRAHQKVLLANGEEGEITSGTFSPTLGKS-IALARL 326
>gi|158313618|ref|YP_001506126.1| glycine cleavage system aminomethyltransferase T [Frankia sp.
EAN1pec]
gi|238686858|sp|A8LFB7|GCST_FRASN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|158109023|gb|ABW11220.1| glycine cleavage system T protein [Frankia sp. EAN1pec]
Length = 365
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 83/300 (27%), Gaps = 55/300 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A F+ +T D+ + A+ + G ++ + D
Sbjct: 54 SHLGKARVAGPGAAEFVNTCLTNDLRRVGPGQAQYTLCCDETGGVVDDLIAYYYAVDNVF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF------------SNSS 114
L + + ++ +L + V + VL+ + S
Sbjct: 114 LVPNAANTAEVVRRLAAQA-PAGVAVTDLHTEFAVLAVQGPAAPEVLRKLGLPADGAYMS 172
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTY---------------------------HEL 147
F D + V++ R+ E + + L
Sbjct: 173 FADAEWKGRPVIVCRSGYTGEAGFELLPRWADAVPLWDELLTVVTGLGGLPCGLGARDTL 232
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R G D +I P A + K + G+E + + R +
Sbjct: 233 RTEMGYPLHGQDLSL-SISPVQARSGW--AVGWDKPAFWGREALLAERAAGPARSLWGLR 289
Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ +P + D E+G + LA+ D ++ G + V
Sbjct: 290 SNDRGIPRPHMRVSGPDGAELGEVTSGTFSPTLRQGIGLALL-----DRSVTAGDEVAVD 344
>gi|284030627|ref|YP_003380558.1| glycine cleavage system T protein [Kribbella flavida DSM 17836]
gi|283809920|gb|ADB31759.1| glycine cleavage system T protein [Kribbella flavida DSM 17836]
Length = 363
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 91/309 (29%), Gaps = 49/309 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A ++ + +T D+ + A+ + G ++ + ++
Sbjct: 52 SHLGKARVVGPGAAAYVNSCLTNDLGKIGPGQAQYTLCCAEDGGVVDDLIAYLHADNDVF 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L + + ++ +L + V + + +L+ ++
Sbjct: 112 LIPNAANTAEVVRRLQADA-PAGVEVTNTHDDYAILAVQGRNSDEVVGAIGLPTGHDYMA 170
Query: 110 -----FSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY----------HEL 147
++ + + R + N + + + + Y L
Sbjct: 171 FAVAEYAGTPVVVCRTGYTGERGYELVIPNDAAVAVFDALLAAGEAYGIVPAGLGARDTL 230
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMI 206
R G D P I P A + K + G + + + + R +
Sbjct: 231 RTEMGYPLHGQDISPQ-ITPVQARSGW--AVGWKKQRFWGDQALRAEKEAGPAKILRGLR 287
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID-KVDHAIKKGMALTVHG 261
G P + D +G + KK +A+A +D +V + + +
Sbjct: 288 AVGRGIPRPHMTVADADGTALGEVTSGTFSPTLKKGVALALLDARVKEGDQVTVDIRGRQ 347
Query: 262 VRVKASFPH 270
+ P
Sbjct: 348 EPFEVVKPP 356
>gi|320104212|ref|YP_004179803.1| glycine cleavage system T protein [Isosphaera pallida ATCC 43644]
gi|319751494|gb|ADV63254.1| glycine cleavage system T protein [Isosphaera pallida ATCC 43644]
Length = 392
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 13/150 (8%)
Query: 8 NQSFIKVCGKSA--IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ + G A L + T V L A+ S IL Q ++ L+ ++ ED
Sbjct: 60 HMGRLDFDGPDADVTTLLDHVTTNAVTRLKPGRAQYSLILNDQAGVIDDVLVYRLPEDRL 119
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ + + R +++D++ V + P +V ++ + R
Sbjct: 120 FMVCNAANRAAVMDQIQR------VAARVAPQARLV---DRTADTVMVAIQGPRALEIVR 170
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN-HGIV 154
L E + +++K+Y LR GI
Sbjct: 171 DLANDPAQAEAL-TNLKSYGCLRATLAGIP 199
>gi|319898677|ref|YP_004158770.1| glycine cleavage system T protein [Bartonella clarridgeiae 73]
gi|319402641|emb|CBI76186.1| glycine cleavage system T protein [Bartonella clarridgeiae 73]
Length = 373
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 91/283 (32%), Gaps = 49/283 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G+ A FL + D L +R + +L Q IL ++++++E F+
Sbjct: 62 SHMQLIAVEGQKAAEFLSYALPIDASLLQKGQSRYNYLLNEQAGILDDLILTRLDECRFM 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + +L R+ V++ +Q + + + F
Sbjct: 122 LVVNAGNAQADFVELKK---RAFGFECQIVALERVLLALQGPQAAAVIADAGFPGNELLF 178
Query: 116 ------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
I S A L+ + + LR+
Sbjct: 179 MQGFEPQKNWFVTRSGYTGEDGFEIALPESQARSLVEKLLDDCRVEWIGLAARDSLRLEA 238
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D P I P +A + S+ K + G E + + R R + +
Sbjct: 239 GLCLHGNDITPD-ITPIEAALTWAVSKSVREKAKFYGAEAFLKAYQKGPSRCR-VGLKPQ 296
Query: 211 DDLPPSGSPILTDDI--EIGTLGVV------VGKKALAIARID 245
P +L DD +IG + G A+ ID
Sbjct: 297 GRQPIRAGAVLLDDKGNQIGVVTSGGFGPSFNGPVAMGYVPID 339
>gi|220904060|ref|YP_002479372.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868359|gb|ACL48694.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 360
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 82/270 (30%), Gaps = 51/270 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L ++ ++ TL R +LT +G +L +I + D+F+ ++ +
Sbjct: 57 RIEGPGATEALSRAVSHNLETLAPGKCRYGFLLTEKGGVLDDGIIYRFGPDSFMAVVNAA 116
Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE-------------HTFSNSSFIDE 118
+ L +L ++ I +I G V + H SF +
Sbjct: 117 CAPGDLATLRA-RLPESIRITDISAETGKVDLQGPDSLDVLEKIMGENFHDLGYFSFRES 175
Query: 119 RFSIADVLLHRTWGHNE-------KIASDIKTY-----------------HELRINHGIV 154
++ VL+ RT E + LR+ G+
Sbjct: 176 KWQGVPVLVSRTGYTGELGYELYLPTDKTEAFWKALLADERVKPVGLGARDTLRLEAGLP 235
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D P +A M + Y+G+E +R+ + +
Sbjct: 236 LYGHDL-DEEHTPAEAGMARMMTSQAD---YVGREGAQ------TVREVLVPLQIEGRRA 285
Query: 215 PSGSPILT--DDIEIGTLGVVVGKKALAIA 242
+L +G + +L
Sbjct: 286 ARHGDVLALPGGEAVGRITSGSFAPSLGYV 315
>gi|207722207|ref|YP_002252644.1| aminomethyltransferase( partial sequence n terminus) protein
[Ralstonia solanacearum MolK2]
gi|206587382|emb|CAQ17965.1| probable aminomethyltransferase( partial sequence n terminus)
protein [Ralstonia solanacearum MolK2]
Length = 133
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEED 63
S+ + + G FL+ ++ +V L A + +L +G ++ ++ +ED
Sbjct: 73 SHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYTCMLNHKGGVIDDLIVYFFQED 130
>gi|152987324|ref|YP_001351276.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
aeruginosa PA7]
gi|150962482|gb|ABR84507.1| glycine cleavage system T protein [Pseudomonas aeruginosa PA7]
Length = 360
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ ++ +
Sbjct: 50 SHMTVVDVAGEQARAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-DNGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFRVDLKERGDLAMLAIQGPNARMHTSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D L RT E + + LR+
Sbjct: 169 DLKPFQGRAEGDWFLARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMAWTVAWEPAARGFVGRRALEAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + + G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGVGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|121601850|ref|YP_989358.1| glycine cleavage system aminomethyltransferase T [Bartonella
bacilliformis KC583]
gi|120614027|gb|ABM44628.1| glycine cleavage system T protein [Bartonella bacilliformis KC583]
Length = 373
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 88/263 (33%), Gaps = 41/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL + D L + +R + +L Q IL +I+++ E F+
Sbjct: 62 SHMKLIVVEGPQAVEFLSYALPVDAALLKDRQSRYNYLLNEQAGILDDLIITRVGECRFM 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTF---SNSSFIDERF- 120
L ++ + +L R V + + + V+L+ +++ F
Sbjct: 122 LVVNAGNAQADFIELE----RRAVGFDCQVTACDRVLLALQGPQAAAVMADAGFPRNELF 177
Query: 121 ------SIADVLLHRTWGHNEK------------------IASDIKTY------HELRIN 150
D + R+ E ++ D + LR+
Sbjct: 178 FMQGFEPQQDWFVTRSGYTGEDGFEIALPVNQACSLAEKLLSDDRVEWIGLAARDSLRLE 237
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D P T AL + K + G + + R+R + T
Sbjct: 238 AGLCLHGNDITPDTNPIEAALTWAVPKTVREKAKFYGAKAFLEAYEKGPSRRRVGLRPQT 297
Query: 211 DDLPPSGSPILTD-DIEIGTLGV 232
+G+ +L + +IG +
Sbjct: 298 RQPVRAGAMLLDNEGNQIGVVTS 320
>gi|56697204|ref|YP_167568.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi
DSS-3]
gi|56678941|gb|AAV95607.1| sarcosine oxidase, alpha subunit family [Ruegeria pomeroyi DSS-3]
Length = 1010
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 73/300 (24%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I+EDTF+
Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTTTGG 738
Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE--------------- 107
+ + + Y +NV E VV ++
Sbjct: 739 AERIHGHMEEWLQTEWWDWKVYV--ANVT-EQYAQIAVVGPKARKVLEKLNAKAGGGMDL 795
Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146
+ D R D +R E + + +
Sbjct: 796 SVEALPFMEWRDGRIGEFDARAYRISFSGELSYEIAVPASQGLAFWEALVDAGKEFGVMP 855
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G + + T+ P D + +S K Y+G+ R +
Sbjct: 856 YGTETLHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKDDYLGKRAQERSHMAD 912
Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVG----KKALAIARIDK 246
R + + + T + P G+ + + + IG + + +A+ I
Sbjct: 913 RDRWKLVGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLGRGIAMGLIQH 972
>gi|206603170|gb|EDZ39650.1| Glycine cleavage system T protein [Leptospirillum sp. Group II
'5-way CG']
Length = 377
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 62/313 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A + +IT+++ +P A +L P G ++ + +
Sbjct: 48 SHMGHFVLRGIDARGAVNRLITSNLKNVPPGKALYGHLLNPAGGVIDDIMAYHFGPERVD 107
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L ++ S R+ + + L + + +E V ++
Sbjct: 108 LIVNASNREGDARWIRDH-LPAGIGLEDCSPGHVGIAVQGPRASRVLEDVLPGILDMRRR 166
Query: 110 -------FSNSSFIDERFSIADVLLHRTWGHNEK------------------IASDIKTY 144
F+ R +G +
Sbjct: 167 ETRLLTIEGGEEFLVGRTGYTGEDGWEFFGPAGPGISFYEKLLQAGKKTGVLACCGLGAR 226
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G + + DA +D + +S TK ++G+ S ++ R P
Sbjct: 227 DLLRLEMGYPLYGQEL-NERLSSFDAGLDFV--VSRTKPEFVGR--TSILESDGHPRMNP 281
Query: 205 M------IITGTDDLPPSGSPI-LTDDIEIGTLGV------VVGKKALAIARIDKVDHAI 251
+ +P +G PI D +G + V LA D +
Sbjct: 282 AHPALGGFVVEGRGIPRTGCPIEKMDGTPVGEVTSGGFSPRVGSGFGLAYLDRDFLAFFR 341
Query: 252 KKGM-ALTVHGVR 263
G + +HGV
Sbjct: 342 NGGPGQVRIHGVA 354
>gi|148653519|ref|YP_001280612.1| glycine cleavage system aminomethyltransferase T [Psychrobacter sp.
PRwf-1]
gi|148572603|gb|ABQ94662.1| aminomethyltransferase [Psychrobacter sp. PRwf-1]
Length = 381
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 3/139 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64
S+ V G A +LQ ++ DV L A S +L G ++ ++ I ED
Sbjct: 52 SHMVITDVEGAQAKAWLQKLLANDVAKLKTVGKALYSGMLNADGGVIDDLIVYLINEDET 111
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+ + + + RD + + +V + +P ++ +
Sbjct: 112 QYRIISNAATRDKDLAQFNKVAEDFDVRLTERPELAILAVQGPKAVAKLKRAKPAWADTL 171
Query: 124 DVLLHRTWGHNEKIASDIK 142
D L I +
Sbjct: 172 DALKPFVGADLTDIEGNDW 190
>gi|294084752|ref|YP_003551510.1| putative oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664325|gb|ADE39426.1| putative oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 823
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 13/151 (8%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ IK+ GK A LQ I DV + + L G I I+++ D F
Sbjct: 490 MSSFGKIKIIGKDAEAVLQTIAANDVA-VAPGKIVYTQFLNEAGHIEADVTITRLSSDEF 548
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
++ + +R ++ I + + T S S + D
Sbjct: 549 LIVTPAAT------------VRRDLHWINGHIPDTAHAIAIDVTVSESVLVVMGPQARDF 596
Query: 126 LLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
L T ++ I HGI
Sbjct: 597 LQPLIPQSLANDDFAFGTMQDIEIGHGIARA 627
>gi|121997980|ref|YP_001002767.1| glycine cleavage system aminomethyltransferase T [Halorhodospira
halophila SL1]
gi|166221554|sp|A1WWA3|GCST_HALHL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|121589385|gb|ABM61965.1| aminomethyltransferase [Halorhodospira halophila SL1]
Length = 360
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 18/174 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP--YKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + + G A L+ + DV L A S +L +G ++ ++ E+ +
Sbjct: 50 SHMAVTDLSGPGARALLREQLANDVAKLDGRPGQALYSCLLNGRGGVVDDLIVYLREDAS 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ + + + R+ + +LL + V E + ++ A
Sbjct: 110 YRVVSNAATREKVRPRLLEQAHAAGVTAEARDDLAMIAVQG---------------PRAA 154
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+L + +G A K + I I T + F D +
Sbjct: 155 SVLEQLFGDQAAAALACKPFQAAAIGE-IFAGRTGYTGEDGFELILPADQAPAL 207
>gi|107104317|ref|ZP_01368235.1| hypothetical protein PaerPA_01005391 [Pseudomonas aeruginosa PACS2]
Length = 360
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ALKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKSAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|84499197|ref|ZP_00997485.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
batsensis HTCC2597]
gi|84392341|gb|EAQ04552.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
batsensis HTCC2597]
Length = 998
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/322 (15%), Positives = 93/322 (28%), Gaps = 63/322 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A F+ + T + TL R + + G ++ ++++ +EDTF+
Sbjct: 666 STLGKIIVKGPDAGRFMDMMYTNMMSTLKPGRCRYGLMCSENGFLMDDGVVARWDEDTFM 725
Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNV-IIEIQPINGVVLSWNQEH------------- 108
D + + + V + + +
Sbjct: 726 CHTTTGGADRIHAHMEEWLQTEWWDWKVWTVNATEQYAQIGVVGPQARAVLQKLGARNIA 785
Query: 109 --TFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHEL------------ 147
F SF D R + + ++R E + + L
Sbjct: 786 NEDFPFMSFQDHRLAGIEARVYRISFSGELSYEIAVPAGQGLALWKALHEAGAEWNVMPY 845
Query: 148 --------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
R G + + T+ P D + IS K +IG+ R
Sbjct: 846 GTEALHVMRAEKGFIMIGDE-TDGTVIPQDLNLHW--AISKKKDDFIGKRAQQRADMTRP 902
Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247
R + + + T + P G+ L + V G + +A+ +
Sbjct: 903 DRWKLIGLETSDGSVLPEGAYALAEGKNANGQRNVQGRVTSTYHSPTLGRGIAMGLVLNG 962
Query: 248 DHAIKKGMAL-TVHGVRVKASF 268
+ + +A V G V A
Sbjct: 963 PDRMGETVAFNKVDGSTVPAKI 984
>gi|26249320|ref|NP_755360.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
CFT073]
gi|227888454|ref|ZP_04006259.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
83972]
gi|300980301|ref|ZP_07174955.1| glycine cleavage system T protein [Escherichia coli MS 45-1]
gi|301049311|ref|ZP_07196281.1| glycine cleavage system T protein [Escherichia coli MS 185-1]
gi|31340144|sp|Q8FE65|GCST_ECOL6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|26109728|gb|AAN81933.1|AE016766_21 Aminomethyltransferase [Escherichia coli CFT073]
gi|227834723|gb|EEJ45189.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
83972]
gi|300298910|gb|EFJ55295.1| glycine cleavage system T protein [Escherichia coli MS 185-1]
gi|300409309|gb|EFJ92847.1| glycine cleavage system T protein [Escherichia coli MS 45-1]
gi|307554881|gb|ADN47656.1| aminomethyltransferase (tetrahydrofolate-dependent) of glycine
cleavage system [Escherichia coli ABU 83972]
gi|315293862|gb|EFU53214.1| glycine cleavage system T protein [Escherichia coli MS 153-1]
Length = 364
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|313675723|ref|YP_004053719.1| glycine cleavage system t protein [Marivirga tractuosa DSM 4126]
gi|312942421|gb|ADR21611.1| glycine cleavage system T protein [Marivirga tractuosa DSM 4126]
Length = 362
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 54/301 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ +Q + + D TL A+ + G I+ LI +I E+ ++
Sbjct: 51 SHMGEFLISGPKALDLIQKVFSNDASTLVVGKAQYGYLPNDNGGIVDDLLIYRIGEEEYM 110
Query: 67 LEIDRSKRDSLIDKLLF---------------YKLRS----NVIIEIQPINGVV-LSWNQ 106
L ++ S + + + + L + +Q + + LS +
Sbjct: 111 LVVNASNIEKDWNWIAKQNEGFGAIMKDISDDFSLFAVQGPKAEDTLQKLTTAMDLSAIK 170
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD---IKTY------------------- 144
F + F D ++ I + G E + +
Sbjct: 171 PFHFQVAPFADTKYVIMSNTGYTGAGGFEIYLHNKDAESVWRKILDAGEEFGIKPIGLGA 230
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D T P +A + TK +I E + + + + + RK
Sbjct: 231 RDTLRMEMGFCLYGNDI-DDTTSPIEAKLGW--ATKFTKD-FINAEDLKKQKEQGVERKL 286
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMA 256
+P G IL D IG + + + D + +A
Sbjct: 287 IAFHMKDRGIPRKGYEILDMDGNTIGVVTSGTQSPTLGHGIGMGYVKTDFAKPETEIQIA 346
Query: 257 L 257
+
Sbjct: 347 V 347
>gi|56697287|ref|YP_167653.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
gi|56679024|gb|AAV95690.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
Length = 812
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 61/205 (29%), Gaps = 46/205 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G+ A FLQ T D+ LP + +L G I +++ D+F++
Sbjct: 493 LMVEGRDAEAFLQRACTNDMA-LPVGRVAYTLMLNDHGGIESDVTVARHGPDSFMVMSAI 551
Query: 72 SKRDSLIDKLL-----------FYKLRSNVIIEIQ-PINGVVLSWNQEHTFSNSSFI--- 116
S D L + ++ + P + +L+ + S+++F
Sbjct: 552 SHTRRDRDHLRNLIRPDEDVRLRDATSAYAVLSLCGPKSRQILADVADIDLSDAAFPFNS 611
Query: 117 ------------DERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147
+R S L + + + + L
Sbjct: 612 LARFHIGHAPVFAQRLSYTGDLGWEIFVTPDFAEHVFDVLMASGAPQGLRLVGGEALNAL 671
Query: 148 RINHGIVDPNTDFLPSTIFPHDALM 172
RI G D + PH +
Sbjct: 672 RIEAGFAHWGHDMAYTEA-PHQVGL 695
>gi|83943009|ref|ZP_00955469.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp.
EE-36]
gi|83846017|gb|EAP83894.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp.
EE-36]
Length = 1005
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 85/275 (30%), Gaps = 58/275 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + + G ++ ++++I++DTF+
Sbjct: 672 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDDDTFL 731
Query: 67 LEIDRSKRDSLIDK-----------LLFYKLRSNVI----------------------IE 93
+S+ Y +NV ++
Sbjct: 732 CHTTTGGAESIHQHMEEWLQTEWWDFNVYV--ANVTEQYAQIAVVGPNARKCLEKLGGMD 789
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141
+ + W + T R S + L W +D+
Sbjct: 790 VSKDALAFMEWA-DGTLGGFKCRVYRISFSGELSYEIAVDAGQGQAFWDALMVAGNDLGV 848
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ H LR G + + T+ P D ++ IS K Y+G+ R
Sbjct: 849 MPYGTECLHILRAEKGFIMIGDE-TDGTVIPQDLGLNW--AISKKKDDYLGKRAQQRSHM 905
Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229
+ R + + + TD LP + + E G
Sbjct: 906 VDPTRWKLVGLETTDGSTLPDGAYAVGEGENENGQ 940
>gi|225873692|ref|YP_002755151.1| glycine cleavage system T protein [Acidobacterium capsulatum ATCC
51196]
gi|254797863|sp|C1F933|GCST_ACIC5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|225792517|gb|ACO32607.1| glycine cleavage system T protein [Acidobacterium capsulatum ATCC
51196]
Length = 378
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/318 (16%), Positives = 107/318 (33%), Gaps = 65/318 (20%)
Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I++ G A+ Q I D L A SA+L PQG + ++ K ++
Sbjct: 57 SHMGDIQLRGPGSLDAV---QHICMNDASKLAVGQAHYSAMLYPQGTFVDDVIVHKFSDN 113
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN---------SS 114
+++ I+ R+ + + + + + L+ ++
Sbjct: 114 DYLIVINAGTREKDYEWIRSHAQPFHCHVSNYSDLYTQLAIQGPRAAETLAKLTSVDLAA 173
Query: 115 FIDERFSIADV------LLHRTWGHNEK-----IASDIKTYHELRINHGIVDPNTDF--- 160
+ RF+ V L+ RT E I SD T R+ + +++ +F
Sbjct: 174 IKNYRFTWGTVCNLHNTLIARTGYTGEDGFEIYIPSDEAT--SERVWNEVLEAGKEFGIV 231
Query: 161 ----------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ I +A +D L KG ++G E + ++ +
Sbjct: 232 PCGLGARNTLRLESAMALYGHEISQDIDVFEAGLDRYC--KLDKGTFVGSEALKQVVAQG 289
Query: 199 IIRKRPMIITGTD-DLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHA 250
+++ + + D + G +L D +G + ALA +
Sbjct: 290 GPKRKLVGLEMIDRGIARDGYRVLNDTQQAVGYVTSGSPAPFLKKNIALAYVPTELAT-- 347
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + + + VKA
Sbjct: 348 LDREVFVEIRNNPVKARI 365
>gi|309812633|ref|ZP_07706377.1| aminomethyltransferase [Dermacoccus sp. Ellin185]
gi|308433328|gb|EFP57216.1| aminomethyltransferase [Dermacoccus sp. Ellin185]
Length = 367
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 95/295 (32%), Gaps = 45/295 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ F+ + +T D+ + A+ + G ++ ++ ED
Sbjct: 54 SHLGKATVKGAGALDFVNSCLTNDLRKIGPGQAQYTMCCDESGGVVDDLIVYVKAEDDLF 113
Query: 67 LEIDRSKRDSLIDKL--------------LFYKL------RSNVIIE--IQPINGVVLSW 104
L + + ++ +L Y + +S+ ++ P++ +S+
Sbjct: 114 LIPNAANTAEVVRRLEEAAPEGIEVADAHEEYAVLAVQGPKSDEVVSALALPVDHDYMSF 173
Query: 105 NQEH------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------HELR 148
++ T + + ER + + Y LR
Sbjct: 174 DEADWQGRPVTVCRTGYTGERGYELVCRWDDALALWDALVEAAAPYEGLPCGLGARDTLR 233
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMII 207
G D I P A + K + G++ +++ + R R + +
Sbjct: 234 TEMGYPLHGQDLSLD-ITPVQARSGW--AVGWKKDAFWGKDALTKEKAEGPRRISRGLKL 290
Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVH 260
TG +P + + + E+G + L + + V + +G + V
Sbjct: 291 TGRG-IPRAHCIVRDAEGAELGEVTSGTFSPTLGMGVALALVSPMLAEGDQVVVD 344
>gi|303325422|ref|ZP_07355865.1| glycine cleavage system T protein [Desulfovibrio sp. 3_1_syn3]
gi|302863338|gb|EFL86269.1| glycine cleavage system T protein [Desulfovibrio sp. 3_1_syn3]
Length = 360
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 50/295 (16%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID-- 70
++ G A L ++ ++ TL R +L +G +L +I + D F++ ++
Sbjct: 57 RIEGPGADEALSRAVSHNLATLAPGKCRYGFLLNAEGGVLDDCIIYRFGPDVFMIVVNAA 116
Query: 71 --RSKRDSLIDKL-------LFYKLRSNVIIEIQPINGVV-LSWNQ-----------EHT 109
+L ++L + + V ++ GV+ + N+ E T
Sbjct: 117 CAAGDFAALRERLPQSVALTDLSAVTAKVDLQGPESVGVLEAALNENFHDLPYFGFRETT 176
Query: 110 FSNSSFIDERFSIADVL---LHRTWGHNEKIASD-----------IKTYHELRINHGIVD 155
F + + R L L+ W E + + LR+ G+
Sbjct: 177 FDGAPLLVSRTGYTGELGFELYLPWDKAEAFWTALLKDERVKPVGLGARDTLRLEAGLPL 236
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
D P +A M + + Y+G++ R +R+ + +
Sbjct: 237 YGHDL-DDKHSPAEAGMGRMLTSTAD---YVGKDGAQR------VREVLVPLRIEGRRSA 286
Query: 216 SGSPILT--DDIEIGTLGVVVGKKALA-IARIDKVDHAIKKGMALTVHGVRVKAS 267
+L E+G + +L + VD A + V R + +
Sbjct: 287 RHGDVLALPGGPEVGRVTSGSFAPSLGCVIAFAWVDAAQAEHADFVVRTARSELA 341
>gi|189199812|ref|XP_001936243.1| dimethylglycine dehydrogenase, mitochondrial precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983342|gb|EDU48830.1| dimethylglycine dehydrogenase, mitochondrial precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 850
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 59/274 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A+ LQ + T+DV + ++ G +L +S++EED F ++ +
Sbjct: 515 EVSGPGAVHLLQRLTTSDVSK-QPGSITHTLLVNTHGGVLSDIFVSRLEEDVF--QVGAN 571
Query: 73 KRDSLIDKLLFYKLRSNVI---------IEIQPINGVVLSWNQEH-----TFSNSSFIDE 118
L L R V +I + W T S+ F +
Sbjct: 572 TATDLA-YLARQA-RGQVKHTPGEWAQVRDITGSTCCLGLWGPRARDVIQTVSSDDFSNR 629
Query: 119 RFSIADVL------------------------------LHRTWG-------HNEKIASDI 141
V R W + +A+
Sbjct: 630 GLPYMGVKKTSIAGVPVTIFRKSFVGEYGWEIQTTPEYGQRLWDILWQSGKPHGLVAAGR 689
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
++ LRI GI +D P +A + + K ++G+ + + + R
Sbjct: 690 AAFNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFVGKAALESLSKKAAPR 747
Query: 202 K-RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ R + + + P+ D G +
Sbjct: 748 RLRCLTVDDGRSMVMGKEPVFVDGQRAGYITSAA 781
>gi|298373497|ref|ZP_06983486.1| glycine cleavage system T protein [Bacteroidetes oral taxon 274
str. F0058]
gi|298274549|gb|EFI16101.1| glycine cleavage system T protein [Bacteroidetes oral taxon 274
str. F0058]
Length = 363
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 52/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A F+Q I + D+ +L A+ + + +G I+ ++ E++ ++L ++ +
Sbjct: 57 VKGINATQFMQRICSNDIASLAVGRAQYNCLPNGKGGIVDDLIVYHYEDNKYMLVVNAAN 116
Query: 73 ---------------------------------KRDSLIDKLLFYKLRSNV------IIE 93
K ++ KL KL S++ + E
Sbjct: 117 IEKDWAWVNANKIEGVEIENASDNIAQLAIQGPKATEVLQKLTPIKL-SDIPYYAFEVGE 175
Query: 94 IQPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ V++S F + + + + LR+
Sbjct: 176 FAGVKDVIISNTGYTGAGGFELYFYPQHGQKIWDAIFEAGKEFDIKPIGLGARDTLRLEM 235
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G + T P +A + + + K G VS+ ++ + RK
Sbjct: 236 GFCLYGHEI-DDTTSPIEAGLGWITKPAEGKNLIDGDLYVSQRKN-GVSRKLIGFEMKEK 293
Query: 212 DLPPSGSPILTD-DIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P G + IG + L + + + + + V+
Sbjct: 294 AIPRQGYELTDGKGNIIGVVTSGCMSPTAKVGVGLGYVKPEFNKVGTEIAVLIRNKEVKA 353
Query: 265 KASFPH 270
+ P
Sbjct: 354 EVVKPP 359
>gi|126735829|ref|ZP_01751574.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. CCS2]
gi|126715016|gb|EBA11882.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. CCS2]
Length = 366
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 48/305 (15%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + D+ + I+ G +L + K+ ED + + I
Sbjct: 64 VELRGPDAARLMQMLTPRDLRGMLPGQCYYVPIVDETGGMLNDPVALKLSEDRWWISIAD 123
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------RFSIAD 124
S + L Y R +V+++ ++ + + F D RFS D
Sbjct: 124 SDLLFWVKALA-YGYRLDVLVDEPDVSPLAVQGPLAEDLMARVFGDAVRAIKFFRFSWFD 182
Query: 125 VLLHRTWGHN-------------EKIASDIKTYHEL------------------RINHGI 153
+ + + ++ L RI G+
Sbjct: 183 FQGVSMAVARSGYSKQGGYEIYVDGTKNGMPLWNALMEAGKDLDVHAGCPNLVERIEAGL 242
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDD 212
+ D PH+ + GC +G++ + R+ ++ R + I G
Sbjct: 243 LSYGNDMNRENT-PHECGLGRFCSTQTAIGC-VGRDALLRVAKEGPTQQIRAIAIDGDIP 300
Query: 213 LPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
+ PI+ +G + A+ + R+ D +
Sbjct: 301 VCDQVWPIMAKGKRVGQVTSAAKSPDYNTNVAIGMVRMTHWDEGTALDVQTQDGLRAATV 360
Query: 267 SFPHW 271
W
Sbjct: 361 HESFW 365
>gi|71278482|ref|YP_270503.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H]
gi|71144222|gb|AAZ24695.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H]
Length = 375
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 99/272 (36%), Gaps = 44/272 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ GK+A L+ ++ D++ LP R + QG +L ++S D
Sbjct: 57 SHMGQLKLVGKNAAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVSNFG-DHLF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSS---FID 117
+ ++ + + I + + L ++V IEI ++ + S+ F+D
Sbjct: 116 VVVNAACKAQDIAHMQKH-LPADVEIEILEGRALLALQGPKAGEVLKRLLPESADMVFMD 174
Query: 118 ER---FSIADVLLHRTWGHNEK------------------IASDIKTY------HELRIN 150
R F+ A ++ R E +A + + LR+
Sbjct: 175 SRVVDFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGI----SLTKGCYIGQEVVS-RIQHRNIIRKRPM 205
G+ D +T +L+ ++ I G + G +++ +I +++ RKR
Sbjct: 235 SGLCLYGHDIDQTTTPVEASLLWAISKIRRTDGARAGGFPGADIILDQIATKDVARKRIG 294
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236
++ G + EIG +
Sbjct: 295 MVGLGKAPVREGIKLFNAQGDEIGVVTSGTAG 326
>gi|254243903|ref|ZP_04937225.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 2192]
gi|126197281|gb|EAZ61344.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 2192]
Length = 360
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|83954184|ref|ZP_00962904.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp.
NAS-14.1]
gi|83841221|gb|EAP80391.1| sarcosine oxidase, alpha subunit family protein [Sulfitobacter sp.
NAS-14.1]
Length = 1005
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 85/275 (30%), Gaps = 58/275 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + + G ++ ++++I++DTF+
Sbjct: 672 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDDDTFL 731
Query: 67 LEIDRSKRDSLIDK-----------LLFYKLRSNVI----------------------IE 93
+S+ Y +NV ++
Sbjct: 732 CHTTTGGAESIHQHMEEWLQTEWWDFNVYV--ANVTEQYAQIAVVGPNARKCLEKLGGMD 789
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141
+ + W + T R S + L W +D+
Sbjct: 790 VSKDALAFMEWA-DGTLGGFKCRVYRISFSGELSYEIAVDAGQGQAFWDALMVAGNDLGV 848
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ H LR G + + T+ P D ++ IS K Y+G+ R
Sbjct: 849 MPYGTECLHILRAEKGFIMIGDE-TDGTVIPQDLGLNW--AISKKKDDYLGKRAQQRSHM 905
Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229
+ R + + + TD LP + + E G
Sbjct: 906 VDPTRWKLVGLETTDGSTLPDGAYAVGEGENENGQ 940
>gi|325982513|ref|YP_004294915.1| Aminomethyltransferase [Nitrosomonas sp. AL212]
gi|325532032|gb|ADZ26753.1| Aminomethyltransferase [Nitrosomonas sp. AL212]
Length = 360
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 59/306 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEI- 69
+ + G + FL+ ++ +V L A S +LTPQ I+ +I + E F + +
Sbjct: 52 VDIKGDNVRDFLRRLVANNVDKLTLPGKALYSCMLTPQAGIIDDLIIYFLSETWFRIVVN 111
Query: 70 ----DRSKRDSLIDK--------------LLFYKL-----RSNV------------IIEI 94
D+ L + L + R+ V ++
Sbjct: 112 AGTADKDVAWMLKKRDEWAPNLEITPRRDLAMIAVQGPNARAKVWQVIPNSQSATEELKQ 171
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLL-HRTWGHNEKIASDIKTYHELRINHGI 153
V + ++ + AD + ++ + + LR+ G+
Sbjct: 172 FQSAVVGQYFIARTGYTGEDGFEIILPAADAPVFWKSLYAAGVAPAGLGARDTLRLEAGM 231
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH-----------RNIIRK 202
D T P ++ + + + +IG++++S R ++R
Sbjct: 232 NLYGQDM-DETKNPLESGLAWTVDLKSERD-FIGKQILSDTVVTHQLVGLVLVDRGVLRS 289
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGV 262
++ D + SG I + +++A+ARI I + + V
Sbjct: 290 HQQVVGQKDGVEYSG-EITSGG------FSPTMNQSIALARI-PAQITIGDEVDVIVRDK 341
Query: 263 RVKASF 268
+++A
Sbjct: 342 KLRAKV 347
>gi|119483277|ref|ZP_01618691.1| aminomethyltransferase [Lyngbya sp. PCC 8106]
gi|119458044|gb|EAW39166.1| aminomethyltransferase [Lyngbya sp. PCC 8106]
Length = 391
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 89/301 (29%), Gaps = 53/301 (17%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFILE----IDR 71
LQ ++ +D+ L A+ + +LT QG IL + ED ++ R
Sbjct: 84 LQPLVPSDLSRLKPNQAQYTVLLTEQGGILDDIIFYYQGEDADTGTQRGVMIVNAATCSR 143
Query: 72 SKR---------DSLIDKLLFY-KLRS--------NVI-IEIQPINGVVLSWNQEHTFSN 112
K D ++ L Y L + + + + ++ + + T
Sbjct: 144 DKAWISAQLEPTDITLEDLSKYQALMAVQGPQTLEKLQPLVTENLDSIPFFGHLNATVLG 203
Query: 113 SSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
+ R V L + + LR+ + D
Sbjct: 204 HPALIARTGYTGEDGFEIMVAPEVAVQLWQRLLEAGVTPCGLGARDTLRLEAAMALYGQD 263
Query: 160 FLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS 218
T P +A + L I KG +IG+ ++ + + R+ + + G
Sbjct: 264 LDT-TTTPLEAGLSWL--IHWDSKGDFIGRSILESQKTEGVSRRLVGLEMQGRHIARHGY 320
Query: 219 PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
P+ + IG + ALA D + + + +Y
Sbjct: 321 PVKLNGEIIGEITSGTLSPTLGKAIALAYVPTDFARIGQSLDVEIRGKTYSAEVVKRPFY 380
Query: 273 K 273
+
Sbjct: 381 R 381
>gi|15600408|ref|NP_253902.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
aeruginosa PAO1]
gi|218894317|ref|YP_002443187.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
aeruginosa LESB58]
gi|254238088|ref|ZP_04931411.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa C3719]
gi|24636865|sp|Q9HTX5|GCST_PSEAE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|9951522|gb|AAG08600.1|AE004934_7 glycine-cleavage system protein T1 [Pseudomonas aeruginosa PAO1]
gi|126170019|gb|EAZ55530.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa C3719]
gi|218774546|emb|CAW30363.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa LESB58]
Length = 360
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|254577075|ref|XP_002494524.1| ZYRO0A03542p [Zygosaccharomyces rouxii]
gi|238937413|emb|CAR25591.1| ZYRO0A03542p [Zygosaccharomyces rouxii]
Length = 413
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 56/279 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK A+ FL + D L + S +L P G I+ LI+K F + + +
Sbjct: 92 TLQGKDAVNFLHKVTPTDFQQLHPGVGTLSVLLNPNGGIVDDTLITKQSAHDFYMVTNAA 151
Query: 73 KRDS----LIDKLL----------------------FYKLRSNVIIEIQPINGVVLSWNQ 106
+ L+D+L +++ +V+ Q + + +
Sbjct: 152 CAERDSQFLVDELKSVADAKWTPITDRSLLALQGPDAHRVLQHVLAWDQSLADLYFGQRR 211
Query: 107 EHTFSNSSFID-ERFSIADVLLHRTWGHNEKIAS--------------DIKTYHELRINH 151
+ N ++ID R NE + LR+
Sbjct: 212 SYKLFNGAYIDVARSGYTGEDGFEVSIPNEDALQFAQSLLDNEMTKPIGLAARDSLRLEA 271
Query: 152 GIVDPNTDFLPSTIFPHDALM---------DLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
G+ + +I P +A + ++ G+ I ++ ++ +
Sbjct: 272 GLCLYGHEL-DESITPVEAALSWVISKSRRNITEGVKFNGYDKIIDQINNKTHKSLRV-- 328
Query: 203 RPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVGKKAL 239
+GS I D E+G + +L
Sbjct: 329 -GYRYQTKGPAARTGSKIFLPDGKTEVGHVTSGSASPSL 366
>gi|194291148|ref|YP_002007055.1| glycine cleavage system aminomethyltransferase t [Cupriavidus
taiwanensis LMG 19424]
gi|238692785|sp|B3R7J7|GCST_CUPTR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|193224983|emb|CAQ70994.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Cupriavidus taiwanensis LMG
19424]
Length = 375
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G + FL+ ++ +V L A S +L G ++ ++ ED F
Sbjct: 51 SHMCVVDLAGPNTRAFLRGLLANNVDKLQTPGKALYSCMLDEHGGVIDDLIVYFFAEDRF 110
Query: 66 ILEIDRSKR 74
L ++
Sbjct: 111 RLVVNAGTA 119
>gi|209809288|ref|YP_002264826.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238]
gi|208010850|emb|CAQ81250.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238]
Length = 372
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 110/313 (35%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+A++ D++ LP + R + +G I+ +++ D
Sbjct: 54 SHMGQLRLKGDGAAAALEALVPVDIIDLPSQKQRYAFFTNEEGGIMDDLMVANFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117
+ ++ + ++ I L + L +V +E+ ++ + +N F+D
Sbjct: 113 VVVNAACKEQDIAHLQAH-LPKDVELEVIEDRALLALQGPKAADVLSRLQPAVANMLFMD 171
Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150
R + N+K A +T + LR+
Sbjct: 172 SITIDINGIECYVSRSGYTGEDGYEVSVPNDKAAELAETLTSFEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202
G+ D T P +A + L GIS + G + G +++ + I+ +++ RK
Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWGISKNRRADGERAGGFPGADIILKQIETKDVNRK 288
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255
R ++ T G + +D EIG + ++ R D +
Sbjct: 289 RVGLVGQTKAPVREGCKLFDANDTEIGVITSGTAGPTAGKPVSMGYLRTDLAVIGTEVFA 348
Query: 256 ALTVHGVRVKASF 268
+ + +
Sbjct: 349 EVRGKKLAMTVEK 361
>gi|13471020|ref|NP_102589.1| glycine cleavage system aminomethyltransferase T [Mesorhizobium
loti MAFF303099]
gi|14021764|dbj|BAB48375.1| glycine cleavage system protein T [Mesorhizobium loti MAFF303099]
Length = 366
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 37/261 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ L D L ++ S L G IL +++++ + F+
Sbjct: 55 SHMKLFEVSGPQAVALLNRACPLDAGALEISQSKLSFFLNEAGGILDDLIVTRLGDTRFM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
+ + + L +L +N ++++P++ V L+ ++ S
Sbjct: 115 VVANAGNAVADEKHLR--ELATNFDVKVEPLDRVFLAIQGPEAWAALSRAGIETGSLLFM 172
Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152
++ R AD L+ + + + LR+ G
Sbjct: 173 HGVEPRKDWFMSRSGYTGEDGFEIGLPEADARDLVAKLLEDERVLWIGLAARDSLRLEAG 232
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D P T ALM + G +IG + + R +KR +
Sbjct: 233 LCLHGQDITPETDPAAAALMWAIPRDIRASGAFIGADALRAAVERGPAQKRVGLKPEGRQ 292
Query: 213 LPPSGSPIL-TDDIEIGTLGV 232
+G + D G +
Sbjct: 293 PVRAGVALFDADGNPAGHVTS 313
>gi|313110284|ref|ZP_07796177.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 39016]
gi|310882679|gb|EFQ41273.1| glycine-cleavage system protein T1 [Pseudomonas aeruginosa 39016]
Length = 360
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E+ +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT-ENGY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALDAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|49086384|gb|AAT51348.1| PA5215 [synthetic construct]
Length = 361
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +LQ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLTEH-GY 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
+ ++ S RD I + V ++ + ++ +S + +
Sbjct: 109 RVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIR 168
Query: 123 ----------ADVLLHRTWGHNEK-----------------------IASDIKTYHELRI 149
D + RT E + + LR+
Sbjct: 169 ELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPAGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D ++ P A M ++G+ + + K ++
Sbjct: 229 EAGLNLYGQDM-DESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAGDQPKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + I G + K++A+AR+ + + + V+
Sbjct: 288 ERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGD-RAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPS 351
>gi|326330107|ref|ZP_08196419.1| glycine cleavage system T protein [Nocardioidaceae bacterium
Broad-1]
gi|325952117|gb|EGD44145.1| glycine cleavage system T protein [Nocardioidaceae bacterium
Broad-1]
Length = 374
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 81/271 (29%), Gaps = 48/271 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTF 65
S+ + + G+ A F+ A T D+ + A+ + G I+ + +++
Sbjct: 55 SHLGKVMISGQGAAEFVNASFTNDLGRIKPGKAQYTLCCDEETGGIVDDLIAYYRDDEHV 114
Query: 66 ILEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQ----PINGVVLSWNQEHTFSN 112
++ + + ++ +L R ++ +Q + H + +
Sbjct: 115 LIVPNAANTPEVVRRLQAAAPAGITLTDHHRDYAVLAVQGPKSDELLEAVGLPAGHEYMS 174
Query: 113 SSFIDERFSIADVL----------LHRTWGHNEKIASDIKTYHE---------------- 146
R + D + R + + +
Sbjct: 175 FVEAAARDVLGDEIGVVVCRSGYSGERGYELIVANEAAEALWDALLSRGEALGALPCGLG 234
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G D + P++A + + K + G++ + + R
Sbjct: 235 ARDTLRTEMGYPLHGQDITLD-VTPNEAGLGW--AVGWKKDAFWGRDKLVAEKEAGPKRA 291
Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
R ++ G P + LT D+ +G +
Sbjct: 292 LRGIVAVGRGIPRPHMTASLTADVPVGEVTS 322
>gi|297154966|gb|ADI04678.1| sarcosine oxidase alpha subunit family protein [Streptomyces
bingchenggensis BCW-1]
Length = 981
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A FL I T L +AR + P G I + ++EE+ +
Sbjct: 644 STLGKIEIWGADAGEFLNRIYTNAFKKLAPGLARYGVMCKPDGMIFDDGVTLRLEENRYF 703
Query: 67 LEIDRSKRDSLIDKL 81
+ S +++D L
Sbjct: 704 MTTTTSGAAAVLDWL 718
>gi|262274203|ref|ZP_06052015.1| aminomethyltransferase (glycine cleavage system T protein)
[Grimontia hollisae CIP 101886]
gi|262222013|gb|EEY73326.1| aminomethyltransferase (glycine cleavage system T protein)
[Grimontia hollisae CIP 101886]
Length = 372
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 94/270 (34%), Gaps = 48/270 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L+A++ D++ LP R + QG ++ +++ D
Sbjct: 54 SHMGQLRLHGENAAKALEALVPVDIIDLPVGKQRYALFTNEQGGLMDDLMVTNFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS----- 121
+ ++ + + I L L ++V +E + + +L+ + + ++ +
Sbjct: 113 VVVNAACKAQDIAHLRA-NLPADVELE-EVEDRALLALQGPKAAAVLATLNPAVADMVFM 170
Query: 122 --------------------------------IADVLLHRTWGHNEKIASDIKTYHELRI 149
A+ R E + LR+
Sbjct: 171 DAEKIELAGIECLVSRSGYTGEDGYEISVPANKAEEFARRLLIKEEVEWIGLGARDSLRL 230
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVS-RIQHRNIIRKR 203
G+ D T P +A + G + G +++ +I +++ RKR
Sbjct: 231 ECGLCLYGHDI-DQTTTPVEASLLWAISKPRRADGERAGGFPGADIILDQIATKDVSRKR 289
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ + G+ + DD EIG +
Sbjct: 290 VGLLGMSKAPVREGAVLFDADDNEIGVVTS 319
>gi|260466549|ref|ZP_05812738.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259029698|gb|EEW30985.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 817
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 54/278 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68
++ G A L I DV P + +L +G I ++++ E+TF +
Sbjct: 496 ELSGPDAAKALDWICANDVSK-PAGRLTYTQLLNTRGGIEADLTVARLAEETFYIVTGTG 554
Query: 69 ----------------IDRSKRD--SLIDKLLFYKLRS-NVIIEIQPINGVVLSWN---- 105
+D + D L R+ +V+ ++ + ++
Sbjct: 555 FRTHDASWISDHIGEGLDATLADVTEDFGTLSLMGPRARDVLADVTDADVSNAAFPFGHV 614
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELR 148
+E + + R + L + LR
Sbjct: 615 REIAIAGHTVRALRVTYVGELGWELHVPIAATGEVFDALMTAGKRHGIRPVGYRALESLR 674
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ G D P+ P +A + + L K ++G+ + + ++KR
Sbjct: 675 LEKGYRAWGADITPNDT-PQEAGLGW--AVKLRKNTDFVGRRALEKANGT-ALKKRFAGF 730
Query: 208 TGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
T D + IL + +G L G + +
Sbjct: 731 TVDDPDIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 766
>gi|120402214|ref|YP_952043.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
gi|119955032|gb|ABM12037.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
vanbaalenii PYR-1]
Length = 752
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 91/293 (31%), Gaps = 57/293 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A LQA +T DV L SA+ T G ++ + ++ ++ F
Sbjct: 421 LSALRKFEVLGPDAEELLQATLTRDVRRLSRGQVVYSAMCTEAGGVVDDCTVLRLGDNNF 480
Query: 66 ILE----IDRSKRDSLIDKLLFYKLRSN----------VIIEIQPINGVVLSWNQEHTFS 111
D + ++L ++ V L W+ +
Sbjct: 481 RFIGGDPYDGIWLRTQAERLGLGQVWIKDSSDHMHNLAVQGPSSRELLCELIWSPPGQPA 540
Query: 112 ------------------NSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY-- 144
+ R L + W H +++ + Y
Sbjct: 541 LRDLGWFRFLIGRLDGPEGPPLLVSRTGYTGELGYELWIHPNDAETLWDRVWEAGQAYGL 600
Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
LR+ G+V +F T P +A + + ++G++ + I+
Sbjct: 601 APLGLEALELLRVESGLVAAGHEFDEQTD-PFEAGIGFTVPLKSKSDDFVGRD--ALIER 657
Query: 197 RNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
+ ++ + + ++ G + ++G + + +A+ RI
Sbjct: 658 KAHPQRALVGLRLDGNEVAAHGDCVHIGRSQVGVVTSGIRSPVLGAGIALCRI 710
>gi|332292910|ref|YP_004431519.1| glycine cleavage system T protein [Krokinobacter diaphorus
4H-3-7-5]
gi|332170996|gb|AEE20251.1| glycine cleavage system T protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 363
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G++A+ LQ + + DV + A+ + G I+ ++ +I+ED ++
Sbjct: 49 SHMGEFLVSGENALSLLQWVCSNDVSKINVGGAQYNCFPNDTGGIVDDLIVYRIKEDQYM 108
Query: 67 LEIDRSKRD 75
L ++ S D
Sbjct: 109 LVVNASNID 117
>gi|119963904|ref|YP_949507.1| sarcosine oxidase alpha subunit [Arthrobacter aurescens TC1]
gi|119950763|gb|ABM09674.1| sarcosine oxidase alpha subunit [Arthrobacter aurescens TC1]
Length = 981
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 91/305 (29%), Gaps = 72/305 (23%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I++ GK A FL + T L AR + T G I + ++
Sbjct: 637 MDATTL---GKIEIRGKDAGEFLNRVYTNAFKKLAPGSARYGVMCTLDGMIFDDGVTLRL 693
Query: 61 EEDTFILEIDRSKRDSLIDKL------------------------------LFYKLRSNV 90
+ED + + ++D L + + V
Sbjct: 694 DEDRYFMTTTTGGAAKVLDWLEEWHQTEWPELDVVCTSVTEQWSTIAVVGPKSRAVIAKV 753
Query: 91 IIEIQPINGVVL------SWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134
++ G+ ++ + S R S + L + TW
Sbjct: 754 APQLAENGGLEAENFPFMTFRETTLASGVQARVCRISFSGELAYEINIPSWYGLNTWEAV 813
Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
++ +T H LR G D T+ P DA MD + +S K +IG
Sbjct: 814 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMDWI--VSKAKD-FIG 869
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIEI----------GTLGVVVG 235
+ R RK + + D P G+ ++ I + G +
Sbjct: 870 KRSYLRQDASREDRKHLVSVLPVDHSLRLPEGTQLVEKGIPVNPANGPVRMEGFVTSSYH 929
Query: 236 KKALA 240
AL
Sbjct: 930 SAALG 934
>gi|78185799|ref|YP_378233.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CC9902]
gi|123580950|sp|Q3AVT0|GCST_SYNS9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78170093|gb|ABB27190.1| Glycine cleavage system T protein [Synechococcus sp. CC9902]
Length = 365
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 52/304 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---- 62
S+ +++ G + LQ ++ +D+ + A + +L QG I +I +
Sbjct: 49 SHMGVLRLEGANPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDLIIYDLGAIDEK 108
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---- 117
+L I+ + DS + + + + NGV+L+ +
Sbjct: 109 RGALVLVINAACADSDTAWIRERMEPAGLTVTDIKNNGVLLALQGPQAIPLLEQLSGEDL 168
Query: 118 ---ERFSIADV--------------------------------LLHRTWGHNEKIASDIK 142
RF D+ LL +
Sbjct: 169 SGLPRFGHRDLQIQGLSNSVFTARTGYTGEDGAELLLTAEDGQLLWSQLLEKGVAPCGLG 228
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ + D + P +A + L + + +IG++ + R K
Sbjct: 229 ARDTLRLEAAMHLYGQDM-NADTNPFEAGLGWLVHLEMPAD-FIGRQALERAAETG-PNK 285
Query: 203 RPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMAL 257
R + + P+L + +G + L A+A I + +++
Sbjct: 286 RLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSV 345
Query: 258 TVHG 261
+ G
Sbjct: 346 EIRG 349
>gi|182435838|ref|YP_001823557.1| glycine cleavage system aminomethyltransferase T [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464354|dbj|BAG18874.1| putative glycine cleavage system protein T [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 371
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E
Sbjct: 52 LSHMGEITVTGPEAAAFLSYALVGN-IATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93
+++ + ++D L Y L + + +
Sbjct: 111 YMVVANAGNAQIVLDALTERVSGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170
Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143
+ + ++ F+ + L + I +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWRALTEAGAPHGLIPCGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + + + P DA + + + K G ++G+ ++ R
Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTAAAERAETAP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
RK +I +P +G ++ D IG + + +A+A +D A
Sbjct: 288 PRKLVGLIAEGRRVPRAGFAVVADGKVIGEVTSGAPSPTLGRPIAMAYVDAAFAA 342
>gi|103487355|ref|YP_616916.1| glycine cleavage system aminomethyltransferase T [Sphingopyxis
alaskensis RB2256]
gi|98977432|gb|ABF53583.1| glycine cleavage system T protein [Sphingopyxis alaskensis RB2256]
Length = 374
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 44/265 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G+ L+ ++ D+ L R S +L +G +L +I+ E D F
Sbjct: 59 SHMGQLALSGEGVAKALETLVPGDISALKPGRMRYSLLLNDEGGVLDDLMITN-EGDQFG 117
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-------------------- 106
+ ++ + + I L + L ++ + G++
Sbjct: 118 IVVNGAVKWDDIAHLREH-LPDDITLNHNEDYGLLALQGPKAVTALARLVPEAADLVFMQ 176
Query: 107 --EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRIN 150
T++ + R N+ + S LR+
Sbjct: 177 AMPATWNGHAIAISRSGYTGEDGFEISLPNDALESFADALCAMEEVKPIGLGARDSLRLE 236
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMII 207
G+ D +I P +A DL IS + G + G + RKR ++
Sbjct: 237 AGLPLYGHDL-DESIDPVEA--DLAFAISKRRREEGGFPGAARILGHLADGSPRKRVGLV 293
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV 232
G+ + + EIG +
Sbjct: 294 IDGKLPVREGAKLFDGNTEIGVVTS 318
>gi|187731813|ref|YP_001881675.1| glycine cleavage system aminomethyltransferase T [Shigella boydii
CDC 3083-94]
gi|238691769|sp|B2U0S2|GCST_SHIB3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|187428805|gb|ACD08079.1| glycine cleavage system T protein [Shigella boydii CDC 3083-94]
Length = 364
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|68473286|ref|XP_719201.1| hypothetical protein CaO19.12965 [Candida albicans SC5314]
gi|46441008|gb|EAL00308.1| hypothetical protein CaO19.12965 [Candida albicans SC5314]
gi|238883115|gb|EEQ46753.1| hypothetical protein CAWG_05118 [Candida albicans WO-1]
Length = 394
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK A LQ I D+ LP + S +L G ++ +I+K ED + + +
Sbjct: 73 ISGKDAQNLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNAGC 132
Query: 74 RDSLIDKLL 82
R+ + +
Sbjct: 133 REKDVKFIK 141
>gi|146103743|ref|XP_001469634.1| aminomethyltransferase, mitochondrial precursor [Leishmania
infantum]
gi|134074004|emb|CAM72744.1| putative glycine synthase [Leishmania infantum JPCM5]
gi|322503751|emb|CBZ38837.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 377
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G F++ + D+ + + QG I +++++ D
Sbjct: 55 SHMGQYEVRGADREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTRMA-DHLF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFID---- 117
L ++ ++ + + LR +++ P++ +++ + S F+D
Sbjct: 114 LVLNAGCKEKDVAHMER-VLREGAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPD 172
Query: 118 -------ERFSIADVLLHRT-------------------------WGHNEKIASDIKTYH 145
+R SI + + T + +
Sbjct: 173 MGFMQCRQRVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMSRKAEMIGLGARD 232
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQ---HRNI 199
LR+ G+ + I P A + IS + G +IG E + + +
Sbjct: 233 SLRLEAGLNLYGHELT-EDINPVAARF--MWAISKRRMAEGGFIGYEPIKYFRDNASKGA 289
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
+ + + + T + + I +G + L AI +D+ +
Sbjct: 290 VPRLRVGLVSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKV 349
Query: 256 ALTVHGVRVKASF 268
L V G RV A
Sbjct: 350 DLVVRGRRVAAEV 362
>gi|116695891|ref|YP_841467.1| glycine cleavage system T protein [Ralstonia eutropha H16]
gi|113530390|emb|CAJ96737.1| glycine cleavage system T protein [Ralstonia eutropha H16]
Length = 831
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 62/299 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
V G A LQ +++ DV +P +A+L +G ++++ D ++L
Sbjct: 500 VKGADAEAVLQYVMSNDVA-VPPGQTVYTAMLNDRGTYESDLTVTRLAHDQYLLVTGSAQ 558
Query: 69 -----------IDRSKRDSLIDKLLFYKL------RSN-----VIIEIQPINGVVLSWNQ 106
I KR +++D Y + RS V ++
Sbjct: 559 TTRDFNYIERLIPADKRCAIVDVTGQYAVLAVMGPRSRELLQSVSRTDFSNQAFPFGTSK 618
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-----------------LRI 149
E ++ R + L + E T HE LRI
Sbjct: 619 EIDLGYATVRATRLTYVGELGWELYVPVEFAVGVHDTLHEAGKRFGLVNAGYYAIESLRI 678
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRPMI 206
G + + I P +A + ++ + G+E + +++ +R+R +
Sbjct: 679 EKGYRAWSRELTTD-IHPFEAGLSFACKLNTDIP-FRGREALLKLRAAGGAAQVRRRVAV 736
Query: 207 ITGTDDLPP---SGSPILTDD-----IEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+T G IL G + L + + + D
Sbjct: 737 VTLDGASEAMLWGGEAILRTAPDGTVRPAGFVTSAAFGHTLGCPVGMGLLARADGPADA 795
>gi|260461580|ref|ZP_05809827.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
gi|259032650|gb|EEW33914.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
opportunistum WSM2075]
Length = 409
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 80/271 (29%), Gaps = 57/271 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A FL + DV L +A G +L + ++ F L
Sbjct: 78 RIEGPDAEAFLDRVTLRDVTKLKPGRVHYTAWCDDAGFVLDDGTLFRLSPTRFRLCSQER 137
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111
L+D + + V +E + L+ +F+
Sbjct: 138 HLPWLLDSAIGFS----VTVEEETEAVAGLALQGPTSFAVLRDAGFVGVEKLKVFDLTDF 193
Query: 112 ---NSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELRINH 151
+ R L + + +K S + R+
Sbjct: 194 PHDGGAVNISRTGFTGDLGYELFVPADKALSLWDRLMAAGELRGIRAIGYTALNRARLEA 253
Query: 152 GIVDPNTDFLPSTI--------FPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G++ N DF + P + +D + I KG + G+ + + + +R
Sbjct: 254 GLIVANADFTTAEHAIRADRLRMPDEIGLDFM--IDPEKGHFNGRRAILEARAKRRLRHV 311
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ + ++P + + + +G+V
Sbjct: 312 LVGLEIEGNVPAEHAIVYH--KKSQEVGLVS 340
>gi|134101025|ref|YP_001106686.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
gi|291009417|ref|ZP_06567390.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133913648|emb|CAM03761.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 947
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 90/292 (30%), Gaps = 59/292 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + G + + + E+ ++
Sbjct: 613 STLGKIDVQGPDAAEFLDLVYTNKMSTLKVGRIRYGLMCHADGMVFDDGTVMRTGENRYL 672
Query: 67 LEIDRSKRDSLID-----------KLLFY-----------KL---RSNVII-------EI 94
+ ++ L + L RS ++ ++
Sbjct: 673 ISTTSGGAAGVLQWLEDWLQTEWPHLRVHLTSVTEQWATIALVGPRSREVLARVASEMDL 732
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL---LHRTWGHNEKIASDI---------- 141
+ ++W + + R S + L ++ W H ++ +
Sbjct: 733 DNDDFPFMAWQDGSVAGQRARV-CRISFSGELAFEINVPWWHGREVWDALIDAGAPFGIT 791
Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G D T+ PHD M +S K ++G SR
Sbjct: 792 PYGTETMHVLRAEKGFPIVGQD-TDGTVTPHDLGMSW--AVSKKKDDFLGMRSFSRADTS 848
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDI----EIGTLGVVVGKKALAIAR 243
RK + + D+ + G+ ++ + LG V A+ R
Sbjct: 849 RTDRKHLVGLLPADEDLVLEEGAQLVEHSELPQPPVPMLGHVTSSYRSAVLR 900
>gi|328351619|emb|CCA38018.1| aminomethyltransferase [Pichia pastoris CBS 7435]
Length = 391
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G SA FLQ I +D+ L + S +L QG ++ +I+K +E+ F + +
Sbjct: 71 RVKGNSAAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAG 130
Query: 73 KRD 75
RD
Sbjct: 131 CRD 133
>gi|260944506|ref|XP_002616551.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720]
gi|238850200|gb|EEQ39664.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720]
Length = 364
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A+ FLQ I D+ L + S +L +G I+ +I+K ED F + +
Sbjct: 70 RFHGADAVKFLQKITPIDLSQLQPFTSSLSVLLNNEGGIIDDTIITKHGEDKFYMVTNAG 129
Query: 73 KRD 75
R+
Sbjct: 130 CRE 132
>gi|254569542|ref|XP_002491881.1| hypothetical protein [Pichia pastoris GS115]
gi|238031678|emb|CAY69601.1| hypothetical protein PAS_chr2-2_0492 [Pichia pastoris GS115]
Length = 392
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G SA FLQ I +D+ L + S +L QG ++ +I+K +E+ F + +
Sbjct: 72 RVKGNSAAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAG 131
Query: 73 KRD 75
RD
Sbjct: 132 CRD 134
>gi|74024930|ref|XP_829031.1| aminomethyltransferase [Trypanosoma brucei TREU927]
gi|70834417|gb|EAN79919.1| aminomethyltransferase, putative [Trypanosoma brucei]
Length = 375
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 111/310 (35%), Gaps = 49/310 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G FL+ + + +P A + L + + ++++ +D +
Sbjct: 54 SHFGVVEVFGADREKFLEWLTPSAPSRMPSGKAALTMFLNDRAGVKDDCIVTRY-DDRLV 112
Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEH---------------- 108
+ ++ +D +I + +V +E++ V + +
Sbjct: 113 VVVNAGCKDKMIAYMRQSVADFTGDVALEMEDRAIVTVQGPKAASALAPHVEGLDKLLFM 172
Query: 109 --------------TFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147
T + S+ E R A ++ + + A+ + L
Sbjct: 173 QGRQDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN---IIRKRP 204
R G+ + + M + +T+G ++G E ++++ + + R R
Sbjct: 233 RTEAGLNLYSHELSEDIDPVAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRV 292
Query: 205 MIITGT--DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
I+ +P +G+P+L + +G + V + +A+ +D+ I + + L
Sbjct: 293 GILAAPERGPIPRNGTPVLVEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLD 352
Query: 259 VHGVRVKASF 268
V G VKA
Sbjct: 353 VRGKLVKAEI 362
>gi|108803605|ref|YP_643542.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
gi|108764848|gb|ABG03730.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
Length = 812
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 52/275 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67
+V G A+ FLQ + T + P + +L P+G + +++I ED F L
Sbjct: 500 EVGGPGALAFLQRMTTGQLDR-PVGSVTYTLMLDPKGGVRSDITVARISEDLFRLGLNGP 558
Query: 68 --------EIDRS--------------------KRDSLIDKLL----------FYKLRSN 89
+ + L+ L F++ R
Sbjct: 559 QDIAWLEGHLPEDGSVWLRDISGGTCCVGVWGPQARELVQSLSPDDLSNEAFGFFQARR- 617
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ + P+ + +S+ E + + D + D LL+ G I + + LR+
Sbjct: 618 IHVGEVPVLALRVSYVGELGWELYASADMGLRLWD-LLYEAGGPLGVIPAGRGAFEGLRL 676
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G D P++A + + KG +IG+E V R + R+ ++
Sbjct: 677 EKGYRMWGVDVTTEHD-PYEAGLGF--AVKPEKGEFIGREAVLRRREEGPRRRLCCLLLD 733
Query: 210 TDDLPPSGS-PILTDDIEIGTLGVVVGKKALAIAR 243
GS P+ + +G + +I R
Sbjct: 734 DPRAVVMGSEPVYAEGRSVGYVTSA--GYGYSIGR 766
>gi|59713883|ref|YP_206658.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
ES114]
gi|59482131|gb|AAW87770.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
ES114]
Length = 372
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 55/313 (17%), Positives = 111/313 (35%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK+A L+A++ D++ LP + R + G I+ +++ D
Sbjct: 54 SHMGQLRLKGKNAAAALEALVPVDIIDLPSQKQRYAFFTNDNGGIMDDLMVANFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117
+ ++ + ++ I L+ L S+V IE+ ++ + SN F+D
Sbjct: 113 VVVNAACKEQDIAHLVA-NLPSDVEIEVIEDRALLALQGPQAADVLSRLQPSVSNMLFMD 171
Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150
R + N+K A +T + LR+
Sbjct: 172 TAVVEISGIECYVSRSGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202
G+ D T P +A + L IS + + G +V+ + I+ +++ RK
Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWAISKNRRADGERVAGFPGADVILKQIETKDVNRK 288
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255
R ++ T G + DD EIG + ++A R D +
Sbjct: 289 RVGLVGQTKAPVREGCKLYDADDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFA 348
Query: 256 ALTVHGVRVKASF 268
+ + +
Sbjct: 349 DVRGKKLPMTVEK 361
>gi|257093544|ref|YP_003167185.1| glycine cleavage system T protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046068|gb|ACV35256.1| glycine cleavage system T protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 362
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A PFL+ ++ ++ L A SA+L G +L ++ ++E +
Sbjct: 49 SHMCAVDLDGPDARPFLRRLLANNIDKLQLPGKALYSAMLNEGGGVLDDLIVYYLDETHY 108
Query: 66 ILEIDRSKR 74
+ ++
Sbjct: 109 RIVVNAGTA 117
>gi|331678893|ref|ZP_08379567.1| glycine cleavage system T protein [Escherichia coli H591]
gi|331073723|gb|EGI45044.1| glycine cleavage system T protein [Escherichia coli H591]
Length = 418
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 104 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 163
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 164 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 213
>gi|300815642|ref|ZP_07095866.1| glycine cleavage system T protein [Escherichia coli MS 107-1]
gi|300820710|ref|ZP_07100861.1| glycine cleavage system T protein [Escherichia coli MS 119-7]
gi|300921239|ref|ZP_07137611.1| glycine cleavage system T protein [Escherichia coli MS 115-1]
gi|300928157|ref|ZP_07143700.1| glycine cleavage system T protein [Escherichia coli MS 187-1]
gi|301327309|ref|ZP_07220563.1| glycine cleavage system T protein [Escherichia coli MS 78-1]
gi|300411781|gb|EFJ95091.1| glycine cleavage system T protein [Escherichia coli MS 115-1]
gi|300463848|gb|EFK27341.1| glycine cleavage system T protein [Escherichia coli MS 187-1]
gi|300526974|gb|EFK48043.1| glycine cleavage system T protein [Escherichia coli MS 119-7]
gi|300531571|gb|EFK52633.1| glycine cleavage system T protein [Escherichia coli MS 107-1]
gi|300846095|gb|EFK73855.1| glycine cleavage system T protein [Escherichia coli MS 78-1]
gi|324017273|gb|EGB86492.1| glycine cleavage system T protein [Escherichia coli MS 117-3]
Length = 417
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 103 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 162
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 163 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 212
>gi|254456244|ref|ZP_05069673.1| glycine cleavage T protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083246|gb|EDZ60672.1| glycine cleavage T protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 380
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 99/291 (34%), Gaps = 64/291 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F+Q + D+ L + I G IL ++ ++ E+ F L +
Sbjct: 66 VEITGPDAYKFIQLLTPRDLSKLAIGQCKYVLITNNDGGILNDPVLLRLAENHFWLSLAD 125
Query: 72 S------------------KRDSLIDKLL---------FYKLRSNVIIEIQPINGVVLSW 104
S ++ + L KL + I + W
Sbjct: 126 SDVLLWAQGVAVNSGLNVQIKEPDVSPLQLQGPNSGEIMVKLFG------EGIRELKYYW 179
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL----------------- 147
+E+ I R + L + + + +++ Y ++
Sbjct: 180 LREYDLDGIPLIVSRTGWSSELGYEIYLRDGSKGNEL--YEKIMEAGKTHGLQPGHTSSI 237
Query: 148 -RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
RI G++ + D +T P + +D L + ++G++ + +I+ I RK+ I
Sbjct: 238 RRIEGGMLSYHADADINT-NPFELGLDRLVNLDADIN-FVGKDALKKIKQDGIKRKQIGI 295
Query: 207 ITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
+ L + + D+ IG + V ALA+ I + +
Sbjct: 296 EIDCEPLKGPNTTFWELQKDNKIIGKVTSAVYSPRLKKNIALAMVEIQQTE 346
>gi|218438624|ref|YP_002376953.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
PCC 7424]
gi|218171352|gb|ACK70085.1| glycine cleavage system T protein [Cyanothece sp. PCC 7424]
Length = 381
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 85/281 (30%), Gaps = 49/281 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------QG----- 49
S+ GK I LQ ++ +++ L A+ + +L P QG
Sbjct: 59 SHMGKFVFQGKEIIKQLQGLVPSNLSRLKPGQAQYTVLLNPDAGIIDDIIIYYQGETTEG 118
Query: 50 ----KILLYF---------LISKIEEDTF----------ILEIDRSKRDSLID-----KL 81
+++ ++ + ++ ++ + ++ + L
Sbjct: 119 EQQVTMIVNAATTDKDKTWILDHLSSESIQFEDLSQQKALIAVQGISAETFLQTFVKENL 178
Query: 82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
KL ++ I G + +D L R +
Sbjct: 179 SQVKLFEHLNATILEQPGFIARTGYTGEDGFEVMVDPDI---GQQLWRKLSELGVTPCGL 235
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ + D T P +A + L + K +IG+ V+ + + + + R
Sbjct: 236 GARDTLRLEASLALYGQDI-DETTTPLEAGLGWLVHLKTLKDNFIGRAVLEQQKAQGVTR 294
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIA 242
+ + G P+++ +G + L +A
Sbjct: 295 CLVGLQMEGRHIARHGYPVISKGKTVGEVTSGTISPTLGVA 335
>gi|317153275|ref|YP_004121323.1| glycine cleavage system T protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943526|gb|ADU62577.1| glycine cleavage system T protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 360
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 91/285 (31%), Gaps = 57/285 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G A+ L +++ D+ TL R +L G I+ +I + ED ++L ++ +
Sbjct: 58 KLAGPGAMNALNTVVSHDLTTLGPGKCRYGFLLNASGGIIDDLIIYCLAEDEYMLVVNGA 117
Query: 73 KRDSLIDKLLFYKL----RSNV-----IIEIQPINGVVLS-------WN-------QEHT 109
RD ++ L +++ I++Q + + WN +
Sbjct: 118 CRDKDFSQIKANLLGGLSFTDISDETGKIDVQGPESLDVINALTGRKWNELKYFNFEATD 177
Query: 110 FSNSSFIDERFSIADVLLHRTWGHN-------EKIASD-------IKTYHELRINHGIVD 155
+ R L + + EK+A+D + LR+ G
Sbjct: 178 CLGFPMLISRTGYTGELGYELYLPADKALAVWEKLAADTRVEPVGLGARDTLRLEIGYPL 237
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D P +A G L K YIG+ + +R+ + +
Sbjct: 238 YGQDLDDEHT-PVEAGA----GFFLKKETDYIGRAGL------GTVRQMLVPLAIEGRRT 286
Query: 215 PS--GSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAI 251
L + G + ALA R + + +
Sbjct: 287 ARHYDEVFLPSGEKTGVVTSGSFAPSLGHCVALAYVRAEDAEKDL 331
>gi|326565028|gb|EGE15228.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis 103P14B1]
gi|326574135|gb|EGE24083.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis 101P30B1]
Length = 366
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 94/288 (32%), Gaps = 61/288 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118
+ + + + R+ + V + + P + V L+ + + +
Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLAVKP 165
Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141
+ V L W +
Sbjct: 166 EWTDKVNALKPFVGVDLGDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D + P +A M + ++G+ + +++ +
Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKDENRDFVGKSALIALKNDGVKM 284
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIAR 243
++ ++ + +G ++T+D G G +++AIAR
Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIAR 329
>gi|312195635|ref|YP_004015696.1| glycine cleavage system T protein [Frankia sp. EuI1c]
gi|311226971|gb|ADP79826.1| glycine cleavage system T protein [Frankia sp. EuI1c]
Length = 393
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A F+ A +T D+ + A+ + G ++ + +D
Sbjct: 82 SHLGKARVAGPGAAAFVNATLTNDLGRIRPGQAQYTLCCDESGGVVDDLIAYLYGDDDVF 141
Query: 67 LEIDRSKRDSLIDKL 81
L + S ++ +L
Sbjct: 142 LVPNASNTAEVVRRL 156
>gi|71083953|ref|YP_266673.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
gi|71063066|gb|AAZ22069.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1062]
Length = 452
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/322 (15%), Positives = 93/322 (28%), Gaps = 67/322 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
I+V G A F +IT D + AR + G +L ++ +I +D F
Sbjct: 102 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNAYGGVLNDPILLRISKDEFWFSLSD 161
Query: 67 ----------------------LE-IDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS 103
++ + L+ + V ++ P G+ +
Sbjct: 162 SDIGMYLQGVNADGRFDCTIEEIDVCPVQIQGPKSKALMKDLIGDQVDLDNMPFYGLAEA 221
Query: 104 --WNQEHTFSNSSF---------IDERFSIADVLLHRTWGHNEKIASD-IKTYHELRINH 151
++ S S F + E AD + + +K + I H RI
Sbjct: 222 KVGGRDCVISQSGFSGEAGYEIYLREATKYADDMWNAVLAAGKKHSLMVIAPAHHRRIQA 281
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGIS-----LTKGCYIGQEVVSRIQHRNIIRKRPMI 206
GI+ D P + +S K Y+G+ + ++ ++P
Sbjct: 282 GILSWGQDMDHQH-NPFQCNLGYQVSLSGKGEWNKKTDYVGKAALEKMGADLKAGQKPYK 340
Query: 207 ITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIARIDKVD 248
+ L G PI + +G + A+ D
Sbjct: 341 LQLVG-LELGGKPIEEYAPDFWLVSPESGGDPVGFITSPWYHPEKGQNIAMGYVPFDGTL 399
Query: 249 HAIKKGMALTVHGVRVKASFPH 270
+A G G + K P
Sbjct: 400 NA--NGFPKGKVGTKYKVHLPA 419
>gi|126737939|ref|ZP_01753669.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
gi|126721332|gb|EBA18036.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
Length = 819
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/325 (13%), Positives = 98/325 (30%), Gaps = 74/325 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V GK A FLQ T ++ + + +L +G I +++ +++F++
Sbjct: 493 LMVEGKDAESFLQRACTNNMA-MANGRVVYTLMLNERGGIESDVTVARHGDESFMVMSSI 551
Query: 72 SKRDSLIDKLL-------FYKLR----------------SNVIIEIQPINGVVLSWN--- 105
S L +LR +++ + I+ ++
Sbjct: 552 SHTRRDYLHLRDLIQLGEDLRLRDATSAYGVLGIMGPKSRDLLQRVSGIDASNAAFPFNS 611
Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147
Q ++ +R S + + + + + + L
Sbjct: 612 LQHFHIGHAPVFAQRLSYSGEMGWEIFITPDFAEHVFELLMQAGAQDGLCLIGGEALNAL 671
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQH--RNIIRKR 203
R+ G V + + PH M+ + C +E+ + R + R K
Sbjct: 672 RLEKGFVHWGHEMAYTEA-PHQLGMEFV--------CKTKKEIPFIGRDAYLARRAENKG 722
Query: 204 PMI----ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI--DKVDHAI 251
P + + + L P+L D G + + L + ++ + +
Sbjct: 723 PFLCSIKLQDPEPLLHHNEPVLRDGKIAGYVTAGAWGQSLGSAVGLCLLQLPQGQTEKDR 782
Query: 252 KKGMALTV----HGVRVKASFPHWY 272
A TV + S +Y
Sbjct: 783 VAKGAFTVLVEGKSIPADVSLAPFY 807
>gi|254166816|ref|ZP_04873670.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
gi|289596146|ref|YP_003482842.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
gi|197624426|gb|EDY36987.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
gi|289533933|gb|ADD08280.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
Length = 371
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A FL I+ D + A +A + +G ++ +++K+ ED ++
Sbjct: 49 SHMGDIIVEGPDATEFLSFILPTDFSKVKVWKATYTAFINHKGILIDDTIVTKLAEDRYL 108
Query: 67 LEIDRSKRDSLIDKL 81
L + + D + + L
Sbjct: 109 LVPNAATSDLIYNWL 123
>gi|254168905|ref|ZP_04875745.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
gi|197622169|gb|EDY34744.1| glycine cleavage system T protein [Aciduliprofundum boonei T469]
Length = 371
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A FL I+ D + A +A + +G ++ +++K+ ED ++
Sbjct: 49 SHMGDIIVEGPDATEFLSFILPTDFSKVKVWKATYTAFINHKGILIDDTIVTKLAEDRYL 108
Query: 67 LEIDRSKRDSLIDKL 81
L + + D + + L
Sbjct: 109 LVPNAATSDLIYNWL 123
>gi|146103747|ref|XP_001469635.1| aminomethyltransferase, mitochondrial precursor [Leishmania
infantum]
gi|134074005|emb|CAM72745.1| putative glycine synthase [Leishmania infantum JPCM5]
Length = 377
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G F++ + D+ + + QG I +++++ D
Sbjct: 55 SHMGQYEVRGADREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTRMA-DHLF 113
Query: 67 LEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFID---- 117
L ++ ++ + + LR +++ P++ +++ + S F+D
Sbjct: 114 LVLNAGCKEKDVAHMER-VLREGAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPD 172
Query: 118 -------ERFSIADVLLHRT-------------------------WGHNEKIASDIKTYH 145
+R SI + + T + +
Sbjct: 173 MGFMQCRQRVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMSRKAEMIGLGARD 232
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQ---HRNI 199
LR+ G+ + I P A + IS + G +IG E + + +
Sbjct: 233 SLRLEAGLNLYGHELT-EDINPVAARF--MWAISKRRMAEGGFIGYEPIKYFRDNASKGA 289
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
+ + + + T + + I +G + L AI +D+ +
Sbjct: 290 VPRLRVGLVSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKV 349
Query: 256 ALTVHGVRVKASF 268
L V G RV A
Sbjct: 350 DLVVRGRRVAAEV 362
>gi|307309553|ref|ZP_07589208.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti BL225C]
gi|307320385|ref|ZP_07599802.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti AK83]
gi|306893951|gb|EFN24720.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti AK83]
gi|306900013|gb|EFN30634.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
meliloti BL225C]
Length = 377
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 73/313 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
+ + G AI L I T D+ + + + +L +G ++ + ++++L
Sbjct: 59 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYACMLNDRGHFTDDCIVYRTGPNSWMLVHGS 118
Query: 69 ---------------IDRSKRDSL----------IDKLLFYKLRSNVIIEIQPINGVVLS 103
D L +D L Y + I +
Sbjct: 119 GSGYEEIVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKY---------VPGIRDLKYF 169
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHE 146
+ + T + + R + + + I
Sbjct: 170 HHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMIWDRIVAEGKEMGIIPCCFSVLDM 229
Query: 147 LRINHGI---------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ + + P D P + +D +S K + G E +R++ R
Sbjct: 230 LRVESYLLFYPYDNSQMYPFADQPPGDSLW-ELGLDFT--VSPGKTGFRGAEEHARLKGR 286
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKK 253
+ M+I G + + ++G + + K+++AIAR+D VD A++
Sbjct: 287 ERFKIFGMLIDADGP-ADLGDEVYAEGKKVGVITCPSYSTLTKRSMAIARLD-VDKAVQ- 343
Query: 254 GMALTVHGVRVKA 266
G L VHG + A
Sbjct: 344 GAKLEVHGKNLNA 356
>gi|300995663|ref|ZP_07181191.1| glycine cleavage system T protein [Escherichia coli MS 200-1]
gi|110344645|gb|ABG70882.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Escherichia coli 536]
gi|115514259|gb|ABJ02334.1| putative aminomethyltransferase of glycine cleavage system
[Escherichia coli APEC O1]
gi|300304771|gb|EFJ59291.1| glycine cleavage system T protein [Escherichia coli MS 200-1]
gi|315289432|gb|EFU48827.1| glycine cleavage system T protein [Escherichia coli MS 110-3]
gi|324005557|gb|EGB74776.1| glycine cleavage system T protein [Escherichia coli MS 57-2]
gi|324011745|gb|EGB80964.1| glycine cleavage system T protein [Escherichia coli MS 60-1]
Length = 387
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 132
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182
>gi|259909566|ref|YP_002649922.1| glycine cleavage system aminomethyltransferase T [Erwinia
pyrifoliae Ep1/96]
gi|224965188|emb|CAX56720.1| Aminomethyltransferase (Glycine cleavage system T protein) [Erwinia
pyrifoliae Ep1/96]
gi|283479644|emb|CAY75560.1| aminomethyltransferase [Erwinia pyrifoliae DSM 12163]
Length = 365
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+L ++ ++ I ED F
Sbjct: 50 SHMTIVDLRGARTREFLRYLLANDVAKLTRPGKALYTAMLNASAGVIDDLIVYFISEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + V + E ++ + + + F D +
Sbjct: 110 RLVVNSATREKDLAWVAEHAAVYGVELTERDDLSLIAVQGPNAQCKAQRVFDDAQRDAVS 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ L + + + LR+
Sbjct: 170 AMKPFFGVQAGELFIATTGYTGEPGYEIALPNEQAAELWQQLLAAGVQPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR-------- 201
G+ + T+ P A M G + +IG+E++ + + R
Sbjct: 230 EAGMNLYGQEM-DETVSPLAANMGWTIGWEPSDRQFIGREMLELQRAKGTERLVGLIMTE 288
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHG 261
K + + +L I G+ +G +A+AR+ + + +
Sbjct: 289 KGVLRNELPVRFSDADGNMLEGVITSGSFSPTLGCS-IALARV-PAGIGDQAVVQIRNRA 346
Query: 262 VRVKASFP 269
+ V + P
Sbjct: 347 MPVTVTKP 354
>gi|333000555|gb|EGK20133.1| glycine cleavage system T protein [Shigella flexneri K-272]
gi|333015236|gb|EGK34578.1| glycine cleavage system T protein [Shigella flexneri K-227]
Length = 347
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 97/313 (30%), Gaps = 58/313 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + + I ++ ++ + + F D + +
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQLQAVE 152
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 153 GMKPFFGVQVGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRL 212
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV--VSRIQ-----------H 196
G+ + TI P A M T +IG+E V R
Sbjct: 213 EAGMNLYGQEM-DETISPLAANMGWTIAWEPTDRDFIGREALEVQREHGTEKLVGLVMTE 271
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ ++R + TD I+T TLG ++A+AR+ + +
Sbjct: 272 KGVLRNEL-PVRFTDAQGNQHEGIITSGTFSPTLG-----YSIALARVPEGIGETAI-VQ 324
Query: 257 LTVHGVRVKASFP 269
+ + VK + P
Sbjct: 325 IRNREMPVKVTKP 337
>gi|326776463|ref|ZP_08235728.1| glycine cleavage system T protein [Streptomyces cf. griseus
XylebKG-1]
gi|326656796|gb|EGE41642.1| glycine cleavage system T protein [Streptomyces cf. griseus
XylebKG-1]
Length = 371
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 96/295 (32%), Gaps = 54/295 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A++ + T+ AR + I+ G I+ ++ ++ E
Sbjct: 52 LSHMGEITVTGPEAAAFLSYALVGN-IATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRS----------NVIIE------ 93
+++ + ++D L Y L + + +
Sbjct: 111 YMVVANAGNAQIVLDALTERVSGFDAEVRDDRDAYALLAVQGPESPAIMKAVTDADLDGL 170
Query: 94 ---------IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-LHRTWGHNEKIASDIKT 143
+ + ++ F+ + L + I +
Sbjct: 171 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWRALTEAGAPHGLIPCGLSC 230
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI--- 199
LR+ G+ + + + P DA + + + K G ++G+ ++ R
Sbjct: 231 RDTLRLEAGMPLYGHELTTA-LTPFDAGLGRV--VKFEKEGDFVGRAALTAAAERAETAP 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHA 250
RK +I +P +G ++ IG + + +A+A +D A
Sbjct: 288 PRKLVGLIAEGRRVPRAGFAVVAGGKVIGEVTSGAPSPTLGRPIAMAYVDAAFAA 342
>gi|218883610|ref|YP_002427992.1| glycine cleavage system aminomethyltransferase T [Desulfurococcus
kamchatkensis 1221n]
gi|218765226|gb|ACL10625.1| glycine cleavage system aminomethyltransferase T [Desulfurococcus
kamchatkensis 1221n]
Length = 369
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 106/313 (33%), Gaps = 51/313 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAI-LTPQGKILLYFLISKIEEDTF 65
S+ I + G +PF Q I T D+ G + L ++ ++ K+ ++ +
Sbjct: 49 SHMGRILLKGSDVLPFAQYIYTKDISKTKEHFMSGPMLALNQWARVKDDEMMYKVSDEEW 108
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI------------------NGVVLSWNQ- 106
+L + R+S+++ K +EI + + W
Sbjct: 109 LLVTNALARESMLNYFEKVKSEKGFRVEIADLTFNYSMIALQGPRAAEVMESLGAKWAGD 168
Query: 107 ---------EHTFSNSSFIDERFSIADVLLHRTWGHNEKI-------------ASDIKTY 144
E +F+ R WG + ++ + +
Sbjct: 169 LKVLEFRMNEEIHGVKTFLVSRSGWTGEDGFEIWGEHGEMRKLVDLLVSKGVKLAGLIAR 228
Query: 145 HELRINHGIVDPNTDFLPSTI-FPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LRI G V ++ + FP + L I+ K ++G+E + + +
Sbjct: 229 DTLRIEMGFVLGGHEYGEDPVKFPCALSLRYGLGAITWEKRGFVGEEALRACRREGVRWI 288
Query: 203 RPMIITGTDD---LPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGM 255
R + G + P + + +DD+ +G + V + +A+A +D + +
Sbjct: 289 RVGLKLGKEAGRLFPRQDAGVYSDDVWVGWVTSGTYSPVLNRGIAMAYVDARYAVFGEEL 348
Query: 256 ALTVHGVRVKASF 268
A+ + G R A
Sbjct: 349 AVDIRGKRYPAKI 361
>gi|84517358|ref|ZP_01004712.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis
SKA53]
gi|84508838|gb|EAQ05301.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis
SKA53]
Length = 1002
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 93/308 (30%), Gaps = 61/308 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + L R + + G ++ +++++ EDT++
Sbjct: 677 VKGPDAGKFLDMLYTNMMSNLGVGKCRYGLMCSENGFLIDDGVVARMSEDTWLCHTTTGG 736
Query: 74 RDSLIDKL-----------LFYKL--------------RSNVIIEI---QPINGVVLSWN 105
D + + Y ++ ++++ ++ +
Sbjct: 737 ADRIHAWMEDWLQCEWWDWKVYVANVTEQWAQVAVVGPKAKLLLDKLGGTDLSALPFMQW 796
Query: 106 QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-------KTYHELR 148
Q R S + L W ++ + H +R
Sbjct: 797 QAGQIGGFDARVFRISFSGELSYEIAVPAGQGRAFWDALVDAGAEFGIMPYGTEALHIMR 856
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII- 207
G + + T+ P D + +S K Y+G+ +R N R R + +
Sbjct: 857 AEKGFIMIGDE-TDGTVIPQDLNLHW--ALSKKKDDYLGKRAHARSFMDNPDRWRLVGLE 913
Query: 208 TGTDDLPPSGSPILTDDIEI-------GTLGVVVG----KKALAIARIDKVDHAIKKGMA 256
T + P G+ + D G + + +A+ + + + + +
Sbjct: 914 TLDGSVLPDGAYAIADGSNANGQRNTQGRVTSTYHSPTLGRGIAMGLVHRGPDRMGEVIT 973
Query: 257 L-TVHGVR 263
TV +
Sbjct: 974 FNTVDDAK 981
>gi|326568098|gb|EGE18182.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis BC7]
Length = 366
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110
>gi|326566021|gb|EGE16181.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis 12P80B1]
Length = 365
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110
>gi|301027380|ref|ZP_07190720.1| glycine cleavage system T protein [Escherichia coli MS 69-1]
gi|300395080|gb|EFJ78618.1| glycine cleavage system T protein [Escherichia coli MS 69-1]
Length = 387
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 73 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 132
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 133 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 182
>gi|254462773|ref|ZP_05076189.1| glycine cleavage T protein [Rhodobacterales bacterium HTCC2083]
gi|206679362|gb|EDZ43849.1| glycine cleavage T protein [Rhodobacteraceae bacterium HTCC2083]
Length = 392
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 70/294 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G +A F Q + D+ + + I+ G IL ++ ++ E+ F + + D
Sbjct: 79 VEITGPNAAKFTQMLTCRDLSKMAVGQCKYILIINADGGILNDPILLRLAENHFWISLAD 138
Query: 71 RSKRDSLIDKLLFYKLRSN---------VIIEI----------------------QPING 99
L + V I I
Sbjct: 139 SDIL-----------LWAKGVAINSGLDVTISEPDVSPLQLQGPKSGEILKALFGDDIMD 187
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------T 143
+ W +E I R + L + + + + T
Sbjct: 188 LRYYWLREVELKGIPLIVSRTGWSSELGYEIYLRDGSKGDLLWETIMAAGLEFGLKPGHT 247
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
RI G++ + D ST P + D L + + +IG+ + RI+ + RK+
Sbjct: 248 SSIRRIEGGMLSYHADADMST-NPFELGFDRLVNLDMEAD-FIGKAALQRIKDEGLSRKQ 305
Query: 204 PMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVD 248
+I L + I D IG + + ALA+ ++ +
Sbjct: 306 IGLIIDGAPLTCPNTTFWEINLDGTPIGKVTSAIYSPRLEQNIALAMVSVEHAN 359
>gi|110806807|ref|YP_690327.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri
5 str. 8401]
gi|123342543|sp|Q0T0Z3|GCST_SHIF8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|110616355|gb|ABF05022.1| aminomethyltransferase [Shigella flexneri 5 str. 8401]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|311898459|dbj|BAJ30867.1| putative aminomethyltransferase [Kitasatospora setae KM-6054]
Length = 372
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 96/310 (30%), Gaps = 58/310 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A L A++ + L AR + I G IL ++ + ED
Sbjct: 50 LSHMGEITVSGPQAGELLDHALV-GFISALGVLRARYTMICREDGGILDDLIVYRTAEDE 108
Query: 65 FILEIDRSKRDSLIDKLL-FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+++ + S ++D L V+ + + ++ E + D
Sbjct: 109 YLVVANASNAQVVLDALTERAAGFDAVVRDDRDAYALLAVQGPEANGILAKLTDADLPGL 168
Query: 124 -------------DVLLHRTWGHNE-------KIASDIKTY------------------- 144
+V L RT E A +
Sbjct: 169 KYYALLPATVAGREVWLARTGYTGEDGFEVFCAPADAAHLWTALTEAGTAEGLVPCGLSC 228
Query: 145 -HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQEVVSRIQHRNI 199
LR+ G+ + + P DA + + + K G ++G++ + +
Sbjct: 229 RDTLRLEAGMPLYGHELSTE-LTPFDAGLGRV--VRFDKTTNDGAFVGRKALEEAAAQAE 285
Query: 200 IR--KRPMIITGTDDLPPSG--SPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI 251
+ ++ + + P + + + IG + L AIA +D
Sbjct: 286 LNPPRKLVGLVSEGKRVPRAEYAVVDAEGAAIGRITSGSPSPTLGKPIAIAYLDAAHAEP 345
Query: 252 KKGMALTVHG 261
+A+ V G
Sbjct: 346 GSTVAVDVRG 355
>gi|209884574|ref|YP_002288431.1| glycine cleavage system T protein [Oligotropha carboxidovorans OM5]
gi|209872770|gb|ACI92566.1| glycine cleavage system T protein [Oligotropha carboxidovorans OM5]
Length = 382
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 79/260 (30%), Gaps = 42/260 (16%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L+ ++ D+L + R + G IL +++ D L ++ + +D+
Sbjct: 74 EDAAAALERLVPQDILGIAPGRQRYALFTNEDGGILDDLMVANFG-DALFLVVNAACKDA 132
Query: 77 LIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--ER------- 119
L + L +I +Q V + + T S F+D R
Sbjct: 133 DEAHLRAHLSSTCEIVPLTDRALIALQGPKAVAVLEKLDPTISAMRFMDSGPRTLLGIPC 192
Query: 120 ------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
+ A+ L+ + + LR+ G+ D
Sbjct: 193 FVSRSGYTGEDGFEISVPAADAERLVTTLLADPAVLPIGLGARDSLRLEAGLCLYGHDID 252
Query: 162 PSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
T P + ++ + K G + G + + R R+R +
Sbjct: 253 T-TTTPIEGALEWAIQKARRKGGAREGGFPGADTILRQLAEGAPRRRVGLKAEGRAPVRE 311
Query: 217 GSPILTDDIEIGTLGVVVGK 236
+P+ D LG V
Sbjct: 312 DAPLFADASSTNRLGRVTSG 331
>gi|34541215|ref|NP_905694.1| glycine cleavage system aminomethyltransferase T [Porphyromonas
gingivalis W83]
gi|188994414|ref|YP_001928666.1| glycine cleavage system aminomethyltransferase T [Porphyromonas
gingivalis ATCC 33277]
gi|59797832|sp|Q7MUG4|GCST_PORGI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238691465|sp|B2RI74|GCST_PORG3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|34397531|gb|AAQ66593.1| glycine cleavage system T protein [Porphyromonas gingivalis W83]
gi|188594094|dbj|BAG33069.1| aminomethyltransferase [Porphyromonas gingivalis ATCC 33277]
Length = 362
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 86/306 (28%), Gaps = 51/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V G +A+ FLQ + + D L + G I+ FL+ + EE+ +++ + +
Sbjct: 56 VKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAAN 115
Query: 73 ---------------------------------KRDSLIDKLLFYKLRS------NVIIE 93
K ++ +L L V
Sbjct: 116 IAKDWAWCRQQNTMGAILENASDNIAQLAVQGPKATEVMQRLTDIDLNEITYYTFKV-GS 174
Query: 94 IQPINGVVLSWNQEHTFSN-SSFIDERFSIADVLLHRTWGHNEKI-ASDIKTYHELRINH 151
V++S + +++ G E I + + LR+
Sbjct: 175 FAGCPDVIISATGYTGAGGFELYFYPQYAQKIWDALFEAGKPEGIKPAGLGARDTLRLEM 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D T P +A + + + K ++++ + + RK
Sbjct: 235 GFCLYGNDIC-DTTSPIEAGLGWITKFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDK 293
Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P I + IG + + + + G+ + ++
Sbjct: 294 GIPRQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKA 353
Query: 265 KASFPH 270
+ P
Sbjct: 354 EIVKPP 359
>gi|226887919|pdb|3GSI|A Chain A, Crystal Structure Of D552a Dimethylglycine Oxidase Mutant
Of Arthrobacter Globiformis In Complex With
Tetrahydrofolate
Length = 827
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 53/278 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ LQ + TAD+ + +L G + ++++ EDTF L +
Sbjct: 508 LEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSAITVARLSEDTFQLGANG 566
Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100
+ + ++ + ++R S V + +G+
Sbjct: 567 NIDTAYFERAARHQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGL 626
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
+ R S L + + IA+
Sbjct: 627 KYFRAKNVVIGGIPVTAMRLSYVGELGWELYTSADNGQRLWDALWQAGQPFGVIAAGRAA 686
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202
+ LR+ G TD P +A + + + K +IG+ + R + + R
Sbjct: 687 FSSLRLEKGYRSWGTDMTTEHD-PFEAGLGF--AVKMAKESFIGKGALEGRTEEASARRL 743
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
R + I + P+ + +G + +A
Sbjct: 744 RCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVA 781
>gi|194431642|ref|ZP_03063933.1| glycine cleavage system T protein [Shigella dysenteriae 1012]
gi|194419998|gb|EDX36076.1| glycine cleavage system T protein [Shigella dysenteriae 1012]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|262340965|ref|YP_003283820.1| glycine cleavage system aminomethyltransferase T [Blattabacterium
sp. (Blattella germanica) str. Bge]
gi|262272302|gb|ACY40210.1| glycine cleavage system aminomethyltransferase T [Blattabacterium
sp. (Blattella germanica) str. Bge]
Length = 367
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 56/287 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK ++ +Q + T D+ + A+ + + G I+ ++ KI E +
Sbjct: 54 SHMGKFILSGKDSMNLIQYLTTNDLSKIKIGQAQYNCFINEHGGIIDDLVVYKITEKKLL 113
Query: 67 LEIDRSKRDSLIDKLLFYKL---RSNVII------------------------------- 92
L ++ + + + + S++ +
Sbjct: 114 LIVNAANIEKNKKWINHHIKKNAFSDIELIDFSSEYSLLAIQGPFSLFYIQKLTNIPLQK 173
Query: 93 ---------EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
E I V++S A+ + ++ + I I +
Sbjct: 174 IPFYHFEIGEFAEIQKVLISCTGYTGSKGVEIYIPN-EYAEKIWNKILEIKKIIPCGIAS 232
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
+ LR+ G D P +A + + K ++ +E++ + +++ +K
Sbjct: 233 RNSLRLEMGYRLWGKDLC-EKTTPIEAGLSWI--TKFEKK-FLAKEILQKQKNKGEYKKF 288
Query: 204 P-MIITGTDDLPPSG-SPILTDDIEIGTLGVVV------GKKALAIA 242
+I +P G S I D+ IG + L
Sbjct: 289 ISFVIEEKGKIPRDGYSLIDKDNNIIGNVTSGTFSPILKKGIGLGYL 335
>gi|331674389|ref|ZP_08375149.1| glycine cleavage system T protein [Escherichia coli TA280]
gi|331068483|gb|EGI39878.1| glycine cleavage system T protein [Escherichia coli TA280]
Length = 405
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 91 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 150
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 151 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 200
>gi|258653766|ref|YP_003202922.1| glycine cleavage T protein (aminomethyl transferase) [Nakamurella
multipartita DSM 44233]
gi|258556991|gb|ACV79933.1| glycine cleavage T protein (aminomethyl transferase) [Nakamurella
multipartita DSM 44233]
Length = 767
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/327 (15%), Positives = 101/327 (30%), Gaps = 69/327 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +L R + P G ++ + ++ +D F+
Sbjct: 430 STLGKIDVQGPDAGWFLDMLYTNLMSSLKVGFIRYGVMCGPDGMVIDDGTVIRVAQDRFL 489
Query: 67 LEIDRSKRDSLIDKLL--------FYKLRS------NVIIEIQPI--NGVVLSWNQEHTF 110
+ ++D + K+ + V I + V+ + +
Sbjct: 490 VTTTTGNAAKILDWMQEWLQTEWPQRKVTATSVTEHWVTIPLVGPRSRDVLAAVTTDLDV 549
Query: 111 SNSSF-----IDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146
SN +F D + A V + R E + ++ +
Sbjct: 550 SNDAFGFMTWRDTSIAGAPVRVCRISFSGELAYEVNVRAWEGLEVWQALIAAGEPFGITP 609
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G + T+ P D M +S K ++G+ +R +++
Sbjct: 610 YGTETMHVLRAEKGFPIIGQE-TDGTVTPQDLGMSW--AVSKKKVDFLGKRSFARPENQR 666
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDI----------EIGTLGVVVGKK------ALA 240
RK+ + I D + P GS I+ +G + + ALA
Sbjct: 667 ADRKQLIGILPDDPTIVLPEGSQIVETATLTVPVTTPVPMLGHVTSSYHSEALGRGFALA 726
Query: 241 IARIDKVDHAIKKGMALTVHGVRVKAS 267
+ R + + V +
Sbjct: 727 MIRAGRDRIGQHLHAYAGADLIPVTVT 753
>gi|241956604|ref|XP_002421022.1| aminomethyltransferase, mitochondrial precursor, putative; glycine
decarboxylase complex subunit, putative [Candida
dubliniensis CD36]
gi|223644365|emb|CAX41178.1| aminomethyltransferase, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 394
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK A LQ I D+ LP + S +L G ++ +I+K E+ + + +
Sbjct: 73 INGKDAQKLLQKITPIDLNKLPVNTSSLSVLLNNNGGVIDDCIITKHGEEDYYMVTNAGC 132
Query: 74 RDSLIDKLL 82
RD I +
Sbjct: 133 RDKDIKFIK 141
>gi|331648651|ref|ZP_08349739.1| glycine cleavage system T protein [Escherichia coli M605]
gi|331042398|gb|EGI14540.1| glycine cleavage system T protein [Escherichia coli M605]
Length = 405
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 91 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 150
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 151 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 200
>gi|307305580|ref|ZP_07585327.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C]
gi|307317521|ref|ZP_07596960.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83]
gi|306896679|gb|EFN27426.1| FAD dependent oxidoreductase [Sinorhizobium meliloti AK83]
gi|306902283|gb|EFN32879.1| FAD dependent oxidoreductase [Sinorhizobium meliloti BL225C]
Length = 815
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 90/317 (28%), Gaps = 57/317 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++ G+ A +L +IT V + +G+IL + IEED F
Sbjct: 496 LPGFSRFRLKGEGAREWLSGLITGRVPK--PGRIGLAYFADDKGRILTEMSVMAIEEDFF 553
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------------NGVVL 102
L + + + L ++ ++ + + +
Sbjct: 554 FLITAATAQWHDFEWLRKHR-PADAAFTLDDVTVKFACQILTGPKSRAILAEVSDADLAK 612
Query: 103 SWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143
W T + R S A L E A+ ++
Sbjct: 613 GWLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKVEDTAAVFDAVWDAGQKHGLKPFGMEA 672
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G D ++ + K + G+ + R + + + ++
Sbjct: 673 LDSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWAKPDFKGKAALEREKQQGVTKRF 729
Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256
+ + D P S + + +G AL + R D + +
Sbjct: 730 VTLTVEAGDCDAPYMSTLWSGGEVVGETTSGNWGYRTGKSIALGMLRADLAVPGQEVEVE 789
Query: 257 LTVHGVR--VKASFPHW 271
+ + V+ P W
Sbjct: 790 IFGDRFKAIVQPDQPLW 806
>gi|288871243|ref|ZP_06116917.2| glycine cleavage system T protein [Clostridium hathewayi DSM 13479]
gi|288864203|gb|EFC96501.1| glycine cleavage system T protein [Clostridium hathewayi DSM 13479]
Length = 218
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 37/80 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I G+ A+ L ++T D + AR S + +G ++ ++ KI ++ +
Sbjct: 68 SHMGEILCEGEGALDNLNHLLTNDFTGMSDGQARYSPMCNEEGGVVDDLIVYKIRDNHYF 127
Query: 67 LEIDRSKRDSLIDKLLFYKL 86
+ ++ + +D + + L
Sbjct: 128 IVVNAANKDKDFAWMTAHSL 147
>gi|229576679|ref|YP_861538.2| glycine cleavage system aminomethyltransferase T [Gramella forsetii
KT0803]
Length = 360
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 46/268 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G++A+ +Q I + D L A+ S + +G I+ +I +I+ + ++
Sbjct: 49 SHMGEFLISGENALKLIQKISSNDASKLVDGKAQYSCMPNHEGGIVDDLIIYRIDAEKYL 108
Query: 67 LEIDRSKRDS----LIDKLLFYK-LRS-----------------------NVIIEI---- 94
L ++ S + + +R +V +E
Sbjct: 109 LVVNASNIEKDWNWIAQHNTMDATVRDMSDEMSLLAIQGPKAAEAMQSITDVDLENMKFY 168
Query: 95 -------QPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ V++S F +E + + +
Sbjct: 169 TFQVDKFADVEKVIISATGYTGSGGFEIYFRNEDAAQVWNAVMEAGKEYGIKPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + +K +I E + + RK
Sbjct: 229 TLRLEMGYSLYGNDI-NDTTSPIEAGLGWI--TKFSKD-FINSEELKAQKENGPERKLVA 284
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGV 232
+P G I+ + +IG +
Sbjct: 285 FEMDERGIPRQGYDIVDENGKKIGEVTS 312
>gi|117578002|emb|CAL66471.1| aminomethyltransferase (glycine cleavage system T protein)
[Gramella forsetii KT0803]
Length = 373
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 46/268 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G++A+ +Q I + D L A+ S + +G I+ +I +I+ + ++
Sbjct: 62 SHMGEFLISGENALKLIQKISSNDASKLVDGKAQYSCMPNHEGGIVDDLIIYRIDAEKYL 121
Query: 67 LEIDRSKRDS----LIDKLLFYK-LRS-----------------------NVIIEI---- 94
L ++ S + + +R +V +E
Sbjct: 122 LVVNASNIEKDWNWIAQHNTMDATVRDMSDEMSLLAIQGPKAAEAMQSITDVDLENMKFY 181
Query: 95 -------QPINGVVLSWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ V++S F +E + + +
Sbjct: 182 TFQVDKFADVEKVIISATGYTGSGGFEIYFRNEDAAQVWNAVMEAGKEYGIKPIGLAARD 241
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + +K +I E + + RK
Sbjct: 242 TLRLEMGYSLYGNDI-NDTTSPIEAGLGWI--TKFSKD-FINSEELKAQKENGPERKLVA 297
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGV 232
+P G I+ + +IG +
Sbjct: 298 FEMDERGIPRQGYDIVDENGKKIGEVTS 325
>gi|72162750|ref|YP_290407.1| glycine cleavage system aminomethyltransferase T [Thermobifida
fusca YX]
gi|71916482|gb|AAZ56384.1| aminomethyltransferase [Thermobifida fusca YX]
Length = 372
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 94/285 (32%), Gaps = 60/285 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
LS+ I+V G A L ++ L AR + I+T QG +L ++ ++
Sbjct: 56 LSHMGEIRVHGPQAADCLDYALVGQLST----LAVGRARYTMIVTEQGGVLDDLIVYRLA 111
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWN------------- 105
+D +++ + + ++ L R+ I + + +L+
Sbjct: 112 DDDYLVVANAANTGTVAAALTE---RAAGFTATITDETADYALLALQGPQSAAILGPLTD 168
Query: 106 -----------QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------- 144
Q T + ++ + R + A +
Sbjct: 169 VDLSALRPYAAQHGTVAGTAVLLSRTGYTGEDGFEIYLRPGTAAPALWDTLVEAGQPHGL 228
Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQ 195
LR+ G+ + + + P+DA + + + L K G ++G+ ++
Sbjct: 229 LPAGLAARDTLRLEAGMPLYGNELT-AELTPYDAGLGRV--VKLDKPGDFVGRAALAARA 285
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ ++ +P G P+L D + +GT+ L
Sbjct: 286 SSGPTQVLVGLVGRGRRVPRKGYPVLRDGVPVGTVTSGAPSPTLG 330
>gi|296775686|gb|ADH42963.1| glycine cleavage system T protein (aminomethyltransferase)
[uncultured SAR11 cluster alpha proteobacterium
H17925_23J24]
Length = 455
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 83/279 (29%), Gaps = 61/279 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A F +IT D + R + +G +L ++ ++ +D F +
Sbjct: 110 IRVKGPDAEKFTDYVITRDATKISTMRGRYVILCNYKGGVLNDPVLMRVADDEFWFSLSD 169
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118
S + + K R NV I+ V + + N D+
Sbjct: 170 SDIGIYLQGVNADK-RFNVEIDEIDSCPVQIQGPKSKALMNDLIGDQVDLDNMPFYGLAE 228
Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150
+ + + + N + A D+ H RI
Sbjct: 229 AKVGGRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 288
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGIS----LTKGC-YIGQEVVSRIQHRNIIRKRPM 205
GI+ D P + +S K YIG+E + +++ + ++P
Sbjct: 289 AGILSWGQDMDHQN-NPFQCNLGYQVSLSGKGEWNKQSDYIGKEALEKMKEQLKNGEKPY 347
Query: 206 IITGTDDLPPSGSPILT------------DDIEIGTLGV 232
+ L G+P+ +G +
Sbjct: 348 KLQLVG-LELGGNPVEDYANDFWLISNDKGGKPVGFITS 385
>gi|315614938|gb|EFU95576.1| glycine cleavage system T protein [Escherichia coli 3431]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|330916154|ref|XP_003297312.1| hypothetical protein PTT_07671 [Pyrenophora teres f. teres 0-1]
gi|311330080|gb|EFQ94589.1| hypothetical protein PTT_07671 [Pyrenophora teres f. teres 0-1]
Length = 850
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 59/274 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A+ LQ + T+DV + ++ G +L +S++E+D F ++ +
Sbjct: 515 EVAGPGAVHLLQRLTTSDVSK-QPGSITHTLLVNTHGGVLSDLFVSRLEQDVF--QVGAN 571
Query: 73 KRDSLIDKLLFYKLRSNV---------IIEIQPINGVVLSWNQEH--------------- 108
L L R V + +I + W
Sbjct: 572 TATDLA-YLAREA-RRQVNHTPGEWAQVRDITGSTCCLGLWGPRARDVIQMVSSDDFSNK 629
Query: 109 -----------------TFSNSSFIDE---RFSIADVLLHRTWG-------HNEKIASDI 141
T SF+ E R W + +A+
Sbjct: 630 GLPYMGVKKTSIAGVPVTMFRKSFVGEYGWEIQTTPEYGQRLWDTLWQSGKPHGLVAAGR 689
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
++ LRI GI +D P +A + + K +IG+ + + + R
Sbjct: 690 AAFNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFIGKAALESLSKKAAPR 747
Query: 202 K-RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+ R + + + P+ D G +
Sbjct: 748 RLRCLTVDDGRSMVMGKEPVFVDGQRAGYVTSAA 781
>gi|184200245|ref|YP_001854452.1| aminomethyltransferase [Kocuria rhizophila DC2201]
gi|183580475|dbj|BAG28946.1| aminomethyltransferase [Kocuria rhizophila DC2201]
Length = 381
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/328 (15%), Positives = 113/328 (34%), Gaps = 70/328 (21%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A FL A++ + + A+ S I+ G++L + ++ E+
Sbjct: 50 LSHMGEVEVTGPQAGAFLDHALVGV-LSGIGVGRAKYSVIVDEAGRVLDDLITYRLGEER 108
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFS--NSSFIDE- 118
+++ + +D++++ L R+ +V ++ + +++ ++ +D
Sbjct: 109 YLVVPNAGNQDTVVEALQ---QRAEAFDVTVQDRGPETSLIAVQGPRALEVLRATGLDPA 165
Query: 119 --------------RFSIADVLLHRTWGHNE-------KIASDIKTYHE----------- 146
R DVL RT E A ++
Sbjct: 166 EEVAGLKYYACAVARCGGVDVLAARTGYTGEDGFELYCANADAETLWNALLATAEELGTE 225
Query: 147 --------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
LR+ G+ + I P +A + L ++L K G V
Sbjct: 226 DAPVQPAGLAARDSLRLEAGMPLYGHELSTE-ITPVEAGLGKLVEVALRKKDESGTRTVG 284
Query: 193 R----IQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLGVVVGK------KALAI 241
R+ + + + G P +G +L+ + IG + + A+A+
Sbjct: 285 HDALAAMLRSTPERTLIGLEGLGRKPIRAGYTVLSGERTIGEVTSGLPSPTLGKPVAMAL 344
Query: 242 ARIDKVDHAIKKGMALT-VHGVRVKASF 268
D +D +++ G V+ +
Sbjct: 345 VATDALDEIAAGTVSVQDARGRGVEVAR 372
>gi|24114158|ref|NP_708668.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri
2a str. 301]
gi|30064216|ref|NP_838387.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri
2a str. 2457T]
gi|59797859|sp|Q83JU1|GCST_SHIFL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|24053299|gb|AAN44375.1| aminomethyltransferase (T protein; tetrahydrofolate-dependent) of
glycine cleavage system [Shigella flexneri 2a str. 301]
gi|30042473|gb|AAP18197.1| aminomethyltransferase (T protein; tetrahydrofolate-dependent) of
glycine cleavage system [Shigella flexneri 2a str.
2457T]
gi|281602238|gb|ADA75222.1| Aminomethyltransferase [Shigella flexneri 2002017]
gi|313647945|gb|EFS12391.1| glycine cleavage system T protein [Shigella flexneri 2a str. 2457T]
gi|332765836|gb|EGJ96049.1| glycine cleavage system T protein [Shigella flexneri 2930-71]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|15803440|ref|NP_289473.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 EDL933]
gi|15833030|ref|NP_311803.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. Sakai]
gi|168747616|ref|ZP_02772638.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4113]
gi|168753843|ref|ZP_02778850.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4401]
gi|168760033|ref|ZP_02785040.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4501]
gi|168766898|ref|ZP_02791905.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4486]
gi|168775782|ref|ZP_02800789.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4196]
gi|168778918|ref|ZP_02803925.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4076]
gi|168785751|ref|ZP_02810758.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC869]
gi|168800038|ref|ZP_02825045.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC508]
gi|195936523|ref|ZP_03081905.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. EC4024]
gi|208805880|ref|ZP_03248217.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4206]
gi|208814507|ref|ZP_03255836.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4045]
gi|208819863|ref|ZP_03260183.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395867|ref|YP_002272379.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4115]
gi|217327658|ref|ZP_03443741.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
TW14588]
gi|254794854|ref|YP_003079691.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. TW14359]
gi|261226217|ref|ZP_05940498.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256528|ref|ZP_05949061.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
O157:H7 str. FRIK966]
gi|24636856|sp|Q8XD32|GCST_ECO57 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226697519|sp|B5YQ97|GCST_ECO5E RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|12517432|gb|AAG58032.1|AE005520_10 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of
glycine cleavage system [Escherichia coli O157:H7 str.
EDL933]
gi|13363248|dbj|BAB37199.1| aminomethyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|187768751|gb|EDU32595.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017802|gb|EDU55924.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4113]
gi|189003467|gb|EDU72453.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4076]
gi|189358568|gb|EDU76987.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4401]
gi|189363777|gb|EDU82196.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4486]
gi|189369328|gb|EDU87744.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4501]
gi|189373970|gb|EDU92386.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC869]
gi|189377616|gb|EDU96032.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC508]
gi|208725681|gb|EDZ75282.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4206]
gi|208735784|gb|EDZ84471.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4045]
gi|208739986|gb|EDZ87668.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157267|gb|ACI34700.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
EC4115]
gi|209760480|gb|ACI78552.1| aminomethyltransferase [Escherichia coli]
gi|209760482|gb|ACI78553.1| aminomethyltransferase [Escherichia coli]
gi|209760486|gb|ACI78555.1| aminomethyltransferase [Escherichia coli]
gi|217320025|gb|EEC28450.1| glycine cleavage system T protein [Escherichia coli O157:H7 str.
TW14588]
gi|254594254|gb|ACT73615.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
O157:H7 str. TW14359]
gi|320189249|gb|EFW63908.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. EC1212]
gi|326339011|gb|EGD62826.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. 1044]
gi|326343107|gb|EGD66875.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. 1125]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|296113495|ref|YP_003627433.1| glycine cleavage system T protein [Moraxella catarrhalis RH4]
gi|295921189|gb|ADG61540.1| glycine cleavage system T protein [Moraxella catarrhalis RH4]
Length = 366
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDISGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110
>gi|167042027|gb|ABZ06763.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_141F21]
Length = 470
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 91/323 (28%), Gaps = 69/323 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A F +IT D + R + +G +L ++ ++ +D F +
Sbjct: 118 IRVKGPDAEKFTDYVITRDATKISTMRGRYVILCNYKGGVLNDPVLMRVADDEFWFSLSD 177
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------- 118
S + + K R NV I+ V + + D+
Sbjct: 178 SDIGMYLQGVNADK-RFNVEIDEIDACPVQIQGPKAKALMQDLIGDQVDMNNIPFYGLAE 236
Query: 119 -----------RFSIADVLLHRTWGHNEKI-ASDIKT----------------YHELRIN 150
+ + + + N + A D+ H RI
Sbjct: 237 AKVGGRSCVISQSGFSGEAGYEIYLRNATLYAEDMWNAVLKAGKKHKLMVIAPAHHRRIQ 296
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGIS----LTKGC-YIGQEVVSRIQHRNIIRKRPM 205
GI+ D P + +S K Y+G++ + ++ + +P
Sbjct: 297 AGILSWGQDM-DQEHNPFQCNLGYQVSLSGKGEWNKQTDYVGKDALETMKEQLKNGVKPY 355
Query: 206 IITGTDDLPPSGSPI------------LTDDIEIGTLGV------VVGKKALAIARIDKV 247
+ L G PI + +G + A+ +
Sbjct: 356 KLQLVG-LELGGKPIEEYAPDFWLISNSSGGKPVGYITSPWHHPEKRQNIAMGYVPYE-- 412
Query: 248 DHAIKKGMALTVHGVRVKASFPH 270
+ KG + G + K P
Sbjct: 413 GNLNTKGFPIGNFGKKYKVHLPK 435
>gi|320640548|gb|EFX10087.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. G5101]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|293412263|ref|ZP_06654986.1| glycine cleavage system T protein [Escherichia coli B354]
gi|331664478|ref|ZP_08365384.1| glycine cleavage system T protein [Escherichia coli TA143]
gi|331684530|ref|ZP_08385122.1| glycine cleavage system T protein [Escherichia coli H299]
gi|291469034|gb|EFF11525.1| glycine cleavage system T protein [Escherichia coli B354]
gi|331058409|gb|EGI30390.1| glycine cleavage system T protein [Escherichia coli TA143]
gi|331078145|gb|EGI49351.1| glycine cleavage system T protein [Escherichia coli H299]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|218691029|ref|YP_002399241.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
ED1a]
gi|254797874|sp|B7MZ57|GCST_ECO81 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218428593|emb|CAR09374.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
ED1a]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|82778330|ref|YP_404679.1| glycine cleavage system aminomethyltransferase T [Shigella
dysenteriae Sd197]
gi|309785284|ref|ZP_07679915.1| glycine cleavage system T protein [Shigella dysenteriae 1617]
gi|123561624|sp|Q32BW7|GCST_SHIDS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|81242478|gb|ABB63188.1| aminomethyltransferase of glycine cleavage system [Shigella
dysenteriae Sd197]
gi|308926404|gb|EFP71880.1| glycine cleavage system T protein [Shigella dysenteriae 1617]
Length = 364
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|332087642|gb|EGI92769.1| glycine cleavage system T protein [Shigella dysenteriae 155-74]
Length = 347
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142
>gi|320195023|gb|EFW69652.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
WV_060327]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|323966707|gb|EGB62139.1| glycine cleavage system T protein [Escherichia coli M863]
gi|327251669|gb|EGE63355.1| glycine cleavage system T protein [Escherichia coli STEC_7v]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|323960798|gb|EGB56419.1| glycine cleavage system T protein [Escherichia coli H489]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|323978802|gb|EGB73883.1| glycine cleavage system T protein [Escherichia coli TW10509]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|170766017|ref|ZP_02900828.1| glycine cleavage system T protein [Escherichia albertii TW07627]
gi|170125163|gb|EDS94094.1| glycine cleavage system T protein [Escherichia albertii TW07627]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|91212283|ref|YP_542269.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
UTI89]
gi|191173206|ref|ZP_03034737.1| glycine cleavage system T protein [Escherichia coli F11]
gi|215488204|ref|YP_002330635.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O127:H6 str. E2348/69]
gi|218550153|ref|YP_002383944.1| glycine cleavage system aminomethyltransferase T [Escherichia
fergusonii ATCC 35469]
gi|218559897|ref|YP_002392810.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
S88]
gi|218701613|ref|YP_002409242.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
IAI39]
gi|229560214|ref|YP_670783.2| glycine cleavage system aminomethyltransferase T [Escherichia coli
536]
gi|229775962|ref|YP_854123.2| glycine cleavage system aminomethyltransferase T [Escherichia coli
APEC O1]
gi|237706451|ref|ZP_04536932.1| glycine cleavage system aminomethyltransferase T [Escherichia sp.
3_2_53FAA]
gi|254037949|ref|ZP_04872007.1| glycine cleavage system aminomethyltransferase T [Escherichia sp.
1_1_43]
gi|293416157|ref|ZP_06658797.1| glycine cleavage system T protein [Escherichia coli B185]
gi|306812193|ref|ZP_07446391.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
NC101]
gi|312964835|ref|ZP_07779075.1| glycine cleavage system T protein [Escherichia coli 2362-75]
gi|331654404|ref|ZP_08355404.1| glycine cleavage system T protein [Escherichia coli M718]
gi|331659034|ref|ZP_08359976.1| glycine cleavage system T protein [Escherichia coli TA206]
gi|122422546|sp|Q1R7C6|GCST_ECOUT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711369|sp|B7MM91|GCST_ECO45 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711370|sp|B7NHW6|GCST_ECO7I RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711374|sp|B7LPB9|GCST_ESCF3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797872|sp|B7UHV3|GCST_ECO27 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|91073857|gb|ABE08738.1| Aminomethyltransferase [Escherichia coli UTI89]
gi|190906457|gb|EDV66065.1| glycine cleavage system T protein [Escherichia coli F11]
gi|215266276|emb|CAS10705.1| aminomethyltransferase,tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
O127:H6 str. E2348/69]
gi|218357694|emb|CAQ90335.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia
fergusonii ATCC 35469]
gi|218366666|emb|CAR04420.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
S88]
gi|218371599|emb|CAR19438.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
IAI39]
gi|222034599|emb|CAP77341.1| Aminomethyltransferase [Escherichia coli LF82]
gi|226839573|gb|EEH71594.1| glycine cleavage system aminomethyltransferase T [Escherichia sp.
1_1_43]
gi|226899491|gb|EEH85750.1| glycine cleavage system aminomethyltransferase T [Escherichia sp.
3_2_53FAA]
gi|281179909|dbj|BAI56239.1| aminomethyltransferase [Escherichia coli SE15]
gi|291432346|gb|EFF05328.1| glycine cleavage system T protein [Escherichia coli B185]
gi|294492281|gb|ADE91037.1| glycine cleavage system T protein [Escherichia coli IHE3034]
gi|305854231|gb|EFM54669.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
NC101]
gi|307625523|gb|ADN69827.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
UM146]
gi|312290391|gb|EFR18271.1| glycine cleavage system T protein [Escherichia coli 2362-75]
gi|312947437|gb|ADR28264.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O83:H1 str. NRG 857C]
gi|315295693|gb|EFU55013.1| glycine cleavage system T protein [Escherichia coli MS 16-3]
gi|323951657|gb|EGB47532.1| glycine cleavage system T protein [Escherichia coli H252]
gi|323957375|gb|EGB53097.1| glycine cleavage system T protein [Escherichia coli H263]
gi|325498466|gb|EGC96325.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Escherichia fergusonii
ECD227]
gi|330908936|gb|EGH37450.1| aminomethyltransferase (glycine cleavage system T protein)
[Escherichia coli AA86]
gi|331047786|gb|EGI19863.1| glycine cleavage system T protein [Escherichia coli M718]
gi|331053616|gb|EGI25645.1| glycine cleavage system T protein [Escherichia coli TA206]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|332753741|gb|EGJ84120.1| glycine cleavage system T protein [Shigella flexneri K-671]
gi|332754644|gb|EGJ85010.1| glycine cleavage system T protein [Shigella flexneri 2747-71]
gi|333015077|gb|EGK34420.1| glycine cleavage system T protein [Shigella flexneri K-304]
Length = 347
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142
>gi|291284223|ref|YP_003501041.1| Glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Escherichia coli O55:H7 str.
CB9615]
gi|209760478|gb|ACI78551.1| aminomethyltransferase [Escherichia coli]
gi|209760484|gb|ACI78554.1| aminomethyltransferase [Escherichia coli]
gi|290764096|gb|ADD58057.1| Glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Escherichia coli O55:H7 str.
CB9615]
gi|320645795|gb|EFX14780.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H- str. 493-89]
gi|320651095|gb|EFX19535.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H- str. H 2687]
gi|320656591|gb|EFX24487.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320662110|gb|EFX29511.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O55:H7 str. USDA 5905]
gi|320667185|gb|EFX34148.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
O157:H7 str. LSU-61]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|261820158|ref|YP_003258264.1| glycine cleavage system aminomethyltransferase T [Pectobacterium
wasabiae WPP163]
gi|261604171|gb|ACX86657.1| glycine cleavage system T protein [Pectobacterium wasabiae WPP163]
Length = 371
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L G ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDDF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + V I + ++ +
Sbjct: 110 RLVVNSATREKDLAWIEQHAAPFGVAINERKDLALIAVQGPQA 152
>gi|254284910|ref|ZP_04959876.1| glycine cleavage system T protein [Vibrio cholerae AM-19226]
gi|150424913|gb|EDN16690.1| glycine cleavage system T protein [Vibrio cholerae AM-19226]
Length = 376
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIGGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWVGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GVVTSGTAG 326
>gi|16130807|ref|NP_417381.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
str. K-12 substr. MG1655]
gi|82545473|ref|YP_409420.1| glycine cleavage system aminomethyltransferase T [Shigella boydii
Sb227]
gi|89109684|ref|AP_003464.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
str. K-12 substr. W3110]
gi|157156090|ref|YP_001464243.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
E24377A]
gi|157162365|ref|YP_001459683.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
HS]
gi|170018849|ref|YP_001723803.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
ATCC 8739]
gi|191169453|ref|ZP_03031189.1| glycine cleavage system T protein [Escherichia coli B7A]
gi|193063577|ref|ZP_03044666.1| glycine cleavage system T protein [Escherichia coli E22]
gi|193070530|ref|ZP_03051469.1| glycine cleavage system T protein [Escherichia coli E110019]
gi|194426217|ref|ZP_03058772.1| glycine cleavage system T protein [Escherichia coli B171]
gi|194436710|ref|ZP_03068810.1| glycine cleavage system T protein [Escherichia coli 101-1]
gi|209920359|ref|YP_002294443.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
SE11]
gi|218555453|ref|YP_002388366.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
IAI1]
gi|218696501|ref|YP_002404168.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
55989]
gi|238902030|ref|YP_002927826.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
BW2952]
gi|253772254|ref|YP_003035085.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162817|ref|YP_003045925.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
B str. REL606]
gi|256019296|ref|ZP_05433161.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9]
gi|256024584|ref|ZP_05438449.1| glycine cleavage system aminomethyltransferase T [Escherichia sp.
4_1_40B]
gi|260845574|ref|YP_003223352.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O103:H2 str.
12009]
gi|260857028|ref|YP_003230919.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O26:H11 str.
11368]
gi|260869582|ref|YP_003235984.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O111:H- str.
11128]
gi|293449228|ref|ZP_06663649.1| glycine cleavage system T protein [Escherichia coli B088]
gi|300906542|ref|ZP_07124235.1| glycine cleavage system T protein [Escherichia coli MS 84-1]
gi|300925112|ref|ZP_07141027.1| glycine cleavage system T protein [Escherichia coli MS 182-1]
gi|300947630|ref|ZP_07161800.1| glycine cleavage system T protein [Escherichia coli MS 116-1]
gi|300954252|ref|ZP_07166717.1| glycine cleavage system T protein [Escherichia coli MS 175-1]
gi|301303064|ref|ZP_07209191.1| glycine cleavage system T protein [Escherichia coli MS 124-1]
gi|301643743|ref|ZP_07243782.1| glycine cleavage system T protein [Escherichia coli MS 146-1]
gi|307139593|ref|ZP_07498949.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
H736]
gi|307310476|ref|ZP_07590124.1| glycine cleavage system T protein [Escherichia coli W]
gi|309793978|ref|ZP_07688403.1| glycine cleavage system T protein [Escherichia coli MS 145-7]
gi|312972853|ref|ZP_07787026.1| glycine cleavage system T protein [Escherichia coli 1827-70]
gi|331643596|ref|ZP_08344727.1| glycine cleavage system T protein [Escherichia coli H736]
gi|331669641|ref|ZP_08370487.1| glycine cleavage system T protein [Escherichia coli TA271]
gi|332280410|ref|ZP_08392823.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9]
gi|121086|sp|P27248|GCST_ECOLI RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123558642|sp|Q31WG6|GCST_SHIBS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166989726|sp|A7ZR14|GCST_ECO24 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166989727|sp|A8A446|GCST_ECOHS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|189039313|sp|B1IT97|GCST_ECOLC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226697520|sp|B6I738|GCST_ECOSE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226711371|sp|B7LYG9|GCST_ECO8A RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|254797873|sp|B7LF91|GCST_ECO55 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|259647491|sp|C5A0H7|GCST_ECOBW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|293651790|pdb|3A8I|A Chain A, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
gi|293651791|pdb|3A8I|B Chain B, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
gi|293651792|pdb|3A8I|C Chain C, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
gi|293651793|pdb|3A8I|D Chain D, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
gi|293651796|pdb|3A8J|A Chain A, Crystal Structure Of Et-Ehred Complex
gi|293651797|pdb|3A8J|B Chain B, Crystal Structure Of Et-Ehred Complex
gi|293651798|pdb|3A8J|C Chain C, Crystal Structure Of Et-Ehred Complex
gi|293651799|pdb|3A8J|D Chain D, Crystal Structure Of Et-Ehred Complex
gi|148040|gb|AAC36843.1| T-protein [Escherichia coli]
gi|403343|emb|CAA52144.1| aminomethyltransferase [Escherichia coli str. K-12 substr. W3110]
gi|882435|gb|AAA69073.1| ORF_f364 [Escherichia coli str. K-12 substr. MG1655]
gi|1789272|gb|AAC75943.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
str. K-12 substr. MG1655]
gi|81246884|gb|ABB67592.1| aminomethyltransferase of glycine cleavage system [Shigella boydii
Sb227]
gi|85675717|dbj|BAE76970.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
str. K12 substr. W3110]
gi|157068045|gb|ABV07300.1| glycine cleavage system T protein [Escherichia coli HS]
gi|157078120|gb|ABV17828.1| glycine cleavage system T protein [Escherichia coli E24377A]
gi|169753777|gb|ACA76476.1| glycine cleavage system T protein [Escherichia coli ATCC 8739]
gi|190900500|gb|EDV60313.1| glycine cleavage system T protein [Escherichia coli B7A]
gi|192930854|gb|EDV83459.1| glycine cleavage system T protein [Escherichia coli E22]
gi|192956113|gb|EDV86577.1| glycine cleavage system T protein [Escherichia coli E110019]
gi|194415525|gb|EDX31792.1| glycine cleavage system T protein [Escherichia coli B171]
gi|194424192|gb|EDX40179.1| glycine cleavage system T protein [Escherichia coli 101-1]
gi|209913618|dbj|BAG78692.1| aminomethyltransferase [Escherichia coli SE11]
gi|218353233|emb|CAU99160.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
55989]
gi|218362221|emb|CAQ99839.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
IAI1]
gi|238859980|gb|ACR61978.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
BW2952]
gi|242378436|emb|CAQ33217.1| aminomethyltransferase, subunit of glycine cleavage system
[Escherichia coli BL21(DE3)]
gi|253323298|gb|ACT27900.1| glycine cleavage system T protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974718|gb|ACT40389.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
B str. REL606]
gi|253978884|gb|ACT44554.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
BL21(DE3)]
gi|257755677|dbj|BAI27179.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O26:H11 str.
11368]
gi|257760721|dbj|BAI32218.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O103:H2 str.
12009]
gi|257765938|dbj|BAI37433.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit of
glycine cleavage complex [Escherichia coli O111:H- str.
11128]
gi|260448049|gb|ACX38471.1| glycine cleavage system T protein [Escherichia coli DH1]
gi|284922852|emb|CBG35941.1| aminomethyltransferase (glycine cleavage system protein)
[Escherichia coli 042]
gi|291322318|gb|EFE61747.1| glycine cleavage system T protein [Escherichia coli B088]
gi|300318836|gb|EFJ68620.1| glycine cleavage system T protein [Escherichia coli MS 175-1]
gi|300401718|gb|EFJ85256.1| glycine cleavage system T protein [Escherichia coli MS 84-1]
gi|300418774|gb|EFK02085.1| glycine cleavage system T protein [Escherichia coli MS 182-1]
gi|300452745|gb|EFK16365.1| glycine cleavage system T protein [Escherichia coli MS 116-1]
gi|300841728|gb|EFK69488.1| glycine cleavage system T protein [Escherichia coli MS 124-1]
gi|301077945|gb|EFK92751.1| glycine cleavage system T protein [Escherichia coli MS 146-1]
gi|306909371|gb|EFN39866.1| glycine cleavage system T protein [Escherichia coli W]
gi|308122385|gb|EFO59647.1| glycine cleavage system T protein [Escherichia coli MS 145-7]
gi|309703265|emb|CBJ02600.1| aminomethyltransferase (glycine cleavage system protein)
[Escherichia coli ETEC H10407]
gi|310332795|gb|EFQ00009.1| glycine cleavage system T protein [Escherichia coli 1827-70]
gi|315062209|gb|ADT76536.1| minomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Escherichia coli
W]
gi|315137504|dbj|BAJ44663.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
DH1]
gi|315256789|gb|EFU36757.1| glycine cleavage system T protein [Escherichia coli MS 85-1]
gi|320184549|gb|EFW59350.1| glycine cleavage system aminomethyltransferase T [Shigella flexneri
CDC 796-83]
gi|320202566|gb|EFW77136.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
EC4100B]
gi|323154597|gb|EFZ40796.1| glycine cleavage system T protein [Escherichia coli EPECa14]
gi|323162502|gb|EFZ48352.1| glycine cleavage system T protein [Escherichia coli E128010]
gi|323173903|gb|EFZ59532.1| glycine cleavage system T protein [Escherichia coli LT-68]
gi|323183460|gb|EFZ68857.1| glycine cleavage system T protein [Escherichia coli 1357]
gi|323377207|gb|ADX49475.1| glycine cleavage system T protein [Escherichia coli KO11]
gi|323936088|gb|EGB32383.1| glycine cleavage system T protein [Escherichia coli E1520]
gi|323942004|gb|EGB38183.1| glycine cleavage system T protein [Escherichia coli E482]
gi|324119698|gb|EGC13578.1| glycine cleavage system T protein [Escherichia coli E1167]
gi|331037067|gb|EGI09291.1| glycine cleavage system T protein [Escherichia coli H736]
gi|331063309|gb|EGI35222.1| glycine cleavage system T protein [Escherichia coli TA271]
gi|332090930|gb|EGI96021.1| glycine cleavage system T protein [Shigella boydii 3594-74]
gi|332102762|gb|EGJ06108.1| glycine cleavage system aminomethyltransferase T [Shigella sp. D9]
gi|332344802|gb|AEE58136.1| glycine cleavage system protein GcvT [Escherichia coli UMNK88]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|293370789|ref|ZP_06617335.1| aminomethyltransferase [Bacteroides ovatus SD CMC 3f]
gi|292634149|gb|EFF52692.1| aminomethyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 361
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 50/305 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR-- 71
V G A+ FLQ I + +V L + + +G I+ L+ + E + ++L ++
Sbjct: 56 VKGPHALAFLQKITSNNVAALAPGKIQYTCFPNEEGGIVDDLLVYQYEPEKYMLVVNAAN 115
Query: 72 ---------------SKRDSLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEHTFSNSSF 115
++ ++ D + ++ ++ +Q + + L+ +TF +F
Sbjct: 116 MEKDWNWCVSHNTEGAELENSSDNIAQLAVQGPKAVLALQKLTDIDLASIPYYTFKVGTF 175
Query: 116 IDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------HELRINHG 152
E I + G E + + Y LR+ G
Sbjct: 176 AGEENVIISNTGYTGAGGFELYFYPSVADRIWKAVFEAGEEYGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K +I + ++ + + + RK
Sbjct: 236 FCLYGNDL-DDTTSPIEAGLGWITKFVEGKD-FINRPLLEKQKTEGVTRKLVGFEMVDRG 293
Query: 213 LPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P G ++ + ++G + + + + + + + ++
Sbjct: 294 IPRHGYELVNAEGEQVGVVTSGTMSPTRKIGIGMGYVKPEYSKVGTEICIDMRGRKLKAV 353
Query: 266 ASFPH 270
P
Sbjct: 354 VVKPP 358
>gi|261212793|ref|ZP_05927077.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC341]
gi|260837858|gb|EEX64535.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC341]
Length = 376
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 91/287 (31%), Gaps = 50/287 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + ++A + + + + +
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEK 364
>gi|163840467|ref|YP_001624872.1| glycine cleavage system aminomethyltransferase T [Renibacterium
salmoninarum ATCC 33209]
gi|162953943|gb|ABY23458.1| glycine cleavage system T protein [Renibacterium salmoninarum ATCC
33209]
Length = 382
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 72/335 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A++ + + A+ S I TP G I+ + + ED
Sbjct: 50 LSHMGEIWVRGAQAAAFLDYALVGN-LSAIQVGKAKYSLICTPDGGIIDDLISYRRAEDV 108
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + D++ + + R+ +V ++ + ++ E +
Sbjct: 109 YLVVPNAGNADAVYAE---FVKRAEGFDVELDNVSAQTSLIALQGPEAERILLGLVPAEQ 165
Query: 121 SIA-----------------DVLLHRTWGHNE-------KIASDIKTY------------ 144
+ A +LL RT E + + +
Sbjct: 166 AEAVRELKYYAATEVTVSGLPILLARTGYTGEDGFELYIDNSEAAQLWNSLLTADEVVTP 225
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALM----DLLNGISLTKGCYIGQEVVSRI 194
LR+ + + P +A + L + +G ++G+E +++I
Sbjct: 226 CGLASRDSLRLEAAMPLYGNELGLDG-NPFEAGLGPVVSLAPAKTAKEGDFVGKEALAKI 284
Query: 195 QHRN---------IIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KA 238
+ ++ + + G G P++ + +G + + A
Sbjct: 285 KAERAQTPEGQSVTGKRILVGLQGQGRRAARGHYPVVLNGETVGEVTSGLPSPTLGYPVA 344
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
LA + + + + L +YK
Sbjct: 345 LAYVNAEHSEVGTELQVDLRGKTEPFTVVALPFYK 379
>gi|332999661|gb|EGK19246.1| glycine cleavage system T protein [Shigella flexneri VA-6]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLIVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|255080476|ref|XP_002503818.1| glycine cleavage system t-protein [Micromonas sp. RCC299]
gi|226519085|gb|ACO65076.1| glycine cleavage system t-protein [Micromonas sp. RCC299]
Length = 412
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 100/300 (33%), Gaps = 57/300 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK AI F+++I+ D+ L S + +G I+ +++K+ ++ + ++ +
Sbjct: 94 SMRGKDAIEFVESIVVGDIRGLKNGTGTLSVVTNDKGGIIDDTVVTKVNDEDVYIVLNGA 153
Query: 73 KRDSLI----DKLLFYKL------------RS-------NVIIEIQPINGVVLS------ 103
+ L +K RS + +QP+ + LS
Sbjct: 154 CSEKDQAHINKHLKAFKAKGKDCEFIVHGDRSLLAFQGPKAVDVLQPLTDIDLSKLYFGM 213
Query: 104 -----------WNQEHTFSNSSFIDERFSIAD--VLLHRTWGHNEKIASDIKTYHELRIN 150
W ++ + D L + + + + LR+
Sbjct: 214 FTETSIAGKPVWLTRTGYTGEDGFEISLKKTDTVALTKKLLENPDARMCGLGARDSLRLE 273
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR--NIIRKRPMII 207
G+ D I P +A + G S + C ++G +V+ ++ ++R +
Sbjct: 274 AGLCLYGNDL-NEDIGPIEAGLTWTIGKSRREKCDFVGGDVIKAQLETPASVTKRRIGLK 332
Query: 208 TGTDDLPPSGSPILT-DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260
G +GS IL D E+G + A+ + K G L V
Sbjct: 333 VGKGAPARAGSKILAPDGAEVGEVTSGGFSPVLQENIAMGYV----LKSHAKAGTELQVE 388
>gi|188494031|ref|ZP_03001301.1| glycine cleavage system T protein [Escherichia coli 53638]
gi|188489230|gb|EDU64333.1| glycine cleavage system T protein [Escherichia coli 53638]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|325280446|ref|YP_004252988.1| glycine cleavage system T protein [Odoribacter splanchnicus DSM
20712]
gi|324312255|gb|ADY32808.1| glycine cleavage system T protein [Odoribacter splanchnicus DSM
20712]
Length = 366
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 31/71 (43%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A +Q + T DV L + S +G I+ L+ + + ++L ++ +
Sbjct: 57 IKGPKAFELVQKLTTNDVAALIDGKVQYSCFPNDKGGIVDDLLVYRFSAEKYLLVVNAAN 116
Query: 74 RDSLIDKLLFY 84
+ + ++ Y
Sbjct: 117 IEKDWNWVVKY 127
>gi|323188697|gb|EFZ73982.1| glycine cleavage system T protein [Escherichia coli RN587/1]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|255647916|gb|ACU24416.1| unknown [Glycine max]
Length = 407
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK A+PFL+ ++ ADV L + +G + +I+K+
Sbjct: 79 SLFDVSHMCGLSLKGKDAVPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVT 138
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
+D L ++ ++ L
Sbjct: 139 DDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 198
Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + + ING + E F S + +A +L ++ G
Sbjct: 199 KEDL-SKLFFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKV 257
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G +V+ +
Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 314
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232
+R + + P S S I IG +
Sbjct: 315 QLEEGPKIRRVGFFS-SGPPPRSHSEIQDEGGNNIGEITS 353
>gi|170683423|ref|YP_001745057.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
SMS-3-5]
gi|226711373|sp|B1LDA5|GCST_ECOSM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|170521141|gb|ACB19319.1| glycine cleavage system T protein [Escherichia coli SMS-3-5]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|74313463|ref|YP_311882.1| glycine cleavage system aminomethyltransferase T [Shigella sonnei
Ss046]
gi|123616236|sp|Q3YXW5|GCST_SHISS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|73856940|gb|AAZ89647.1| aminomethyltransferase of glycine cleavage system [Shigella sonnei
Ss046]
Length = 364
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|296127963|ref|YP_003635213.1| glycine cleavage system T protein [Cellulomonas flavigena DSM
20109]
gi|296019778|gb|ADG73014.1| glycine cleavage system T protein [Cellulomonas flavigena DSM
20109]
Length = 401
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I+V G A FL + ++ L AR + I+ P G ++ ++ + +DT+
Sbjct: 64 LSHMGEIEVTGPDAGAFLDRALVGNLTALRVLGARYTMIVQPDGGVIDDLVVYRTGDDTY 123
Query: 66 ILEIDRSKRDSLIDKLL 82
++ + S + ++ +L
Sbjct: 124 LVVANASNHEVVLAELQ 140
>gi|317126682|ref|YP_004100794.1| aminomethyltransferase [Intrasporangium calvum DSM 43043]
gi|315590770|gb|ADU50067.1| aminomethyltransferase [Intrasporangium calvum DSM 43043]
Length = 366
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 51/311 (16%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A L A++ D+ + A+ + I G IL ++ ++EED
Sbjct: 49 LSHMGEIEVVGPQAAALLDHALV-GDISAVAVTKAKYTMICQEDGGILDDLIVYRLEEDR 107
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------- 111
+++ + S ++++ L + ++ + + +++ +
Sbjct: 108 YMVVANASNAETVLGALQERAAGFDAEVQDRRDDWALVAIQGPQASAILAELTDADLAGL 167
Query: 112 ------NSSFID--ERFSIADVLLHRTWGHNEKIASDIKTYHE----------------- 146
+S D R + + A +
Sbjct: 168 KYYAILETSVADRPARLARTGYTGEDGFEIFSDPADAPAIWEALSAAGADRGLIPAGLAC 227
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ + + T P+ A + + + G ++G++ ++ + + I R R
Sbjct: 228 RDSLRLEAAMPLYGNELST-TTTPYAAGLGRVVKLDKPDG-FVGRDALAAVSEQPIQRVR 285
Query: 204 PMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257
+ P G ++ +G + +A+A +D+ + +
Sbjct: 286 VGLRPEGRRAPRHGYAVIDPASGETVGEVTSGAPSPTLGHPIAMAYVDQALAQPGTRLDV 345
Query: 258 TVHGVRVKASF 268
V G V A
Sbjct: 346 DVRGTHVPAEV 356
>gi|301027795|ref|ZP_07191101.1| glycine cleavage system T protein [Escherichia coli MS 196-1]
gi|299879129|gb|EFI87340.1| glycine cleavage system T protein [Escherichia coli MS 196-1]
gi|320175907|gb|EFW50985.1| glycine cleavage system aminomethyltransferase T [Shigella
dysenteriae CDC 74-1112]
gi|320182191|gb|EFW57094.1| glycine cleavage system aminomethyltransferase T [Shigella boydii
ATCC 9905]
gi|323180350|gb|EFZ65902.1| glycine cleavage system T protein [Escherichia coli 1180]
gi|323946609|gb|EGB42632.1| glycine cleavage system T protein [Escherichia coli H120]
gi|332086830|gb|EGI91966.1| glycine cleavage system T protein [Shigella boydii 5216-82]
Length = 347
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142
>gi|323971745|gb|EGB66973.1| aminomethyltransferase folate-binding domain-containing protein
[Escherichia coli TA007]
Length = 153
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 63 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 122
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 123 RLVVNSATREKDLSWITQHA 142
>gi|301099343|ref|XP_002898763.1| aminomethyltransferase [Phytophthora infestans T30-4]
gi|262104836|gb|EEY62888.1| aminomethyltransferase [Phytophthora infestans T30-4]
Length = 406
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 103/268 (38%), Gaps = 43/268 (16%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ +++ GK + FL++++ D+ L A+ S I QG I+ ++S+
Sbjct: 62 SLFDVSHMGQLRITGKDRLQFLESVVVGDLQALGSGEAKLSLITNDQGGIIDDCVVSRY- 120
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKL---------------RSNVIIEIQPINGVVLSWNQ 106
+D + ++ +D + +KL R+ V ++ VV + N
Sbjct: 121 DDHLYVVVNAGNQDVDLVH--MHKLSEGFKGDASIERIQDRALVALQGPGAVDVVETLNP 178
Query: 107 EHTFSNSSFIDERFS--------IADVLLHRTWGHNEK------IASDIKTY-----HEL 147
+ F+ F+ DV+L R E ++ D +T+ +
Sbjct: 179 NVNLKDLEFMHGVFTPLKLKDGKQVDVILTRCGYTGEDGFEISVLSKDAETFARALLDDE 238
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS-RIQHRNIIRKRPM 205
R+ G+ D I P +A + G +G + G ++ +++++ +KR
Sbjct: 239 RV-AGLCLHGHDIT-DKITPIEATLAWTIGKRRREEGGFPGHSIIMDQLKNKTATKKRVG 296
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232
+ G+ + DD +G +
Sbjct: 297 FVV-DGAAAREGAELFDADDNVVGHVTS 323
>gi|195386654|ref|XP_002052019.1| GJ23941 [Drosophila virilis]
gi|194148476|gb|EDW64174.1| GJ23941 [Drosophila virilis]
Length = 414
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 85/275 (30%), Gaps = 57/275 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS- 72
V GK A L++I TAD+L +P + QG IL +++K+ + + + +
Sbjct: 89 VRGKDAAACLESICTADILDMPAGSGSLTVFTNDQGGILDDLIVNKVSDKELYVVSNAAM 148
Query: 73 -----------------------------------------KRDSLIDKL---------L 82
L L
Sbjct: 149 KQQDMQIMTAAVSNFKSQGKDVSIEFLSPAHQSLIAVQGPQAAQELSKLLPQPKAKALEQ 208
Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
Y +RS + E+ I+ V ++ +T + I + + L + + +
Sbjct: 209 LYFMRSGI-FELAGISNVRIT-RCGYTGEDGVEISVPSTQVETLTEALLAAGQLKLAGLG 266
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201
LR+ G+ +D T P +A + L + G + + + R
Sbjct: 267 ARDSLRLEGGLCLYGSDIDAQTT-PVEAALAWLVAKRRRSTSDFPGAQTILQQLKEGAQR 325
Query: 202 KRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV 234
+R + PP +G I + ++G L
Sbjct: 326 RRVGLQMLGAKAPPARAGVAIFSGGKQVGQLTSGC 360
>gi|1707878|sp|P54260|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438254|emb|CAA81081.1| T-protein [Solanum tuberosum]
Length = 406
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 89/280 (31%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK IPFL+ ++ ADV L + +G + +++K+
Sbjct: 79 SLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVT 138
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
D L ++ ++ L
Sbjct: 139 NDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHIHDERSLLALQGPLAAPVLQYLT 198
Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + + ING + E F S + +A LL ++ G
Sbjct: 199 KDDL-SKMYFGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKI 257
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D T P +A + G +G ++G EV+ +
Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDMEQHTT-PVEAGLTWAIGKRRRAEGGFLGAEVILK 314
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
+R + + P S S I ++ IG +
Sbjct: 315 QIEEGPKIRRVGFFS-SGPPPRSHSEIQDSNGQNIGEITS 353
>gi|163746880|ref|ZP_02154237.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus
indolifex HEL-45]
gi|161379994|gb|EDQ04406.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus
indolifex HEL-45]
Length = 1005
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + G ++ ++++++E TF+
Sbjct: 679 VRGPDAARFLDMLYTNMMSTLKPGKCRYGLMCNENGFLIDDGVVARLDEQTFLCHTTTGG 738
Query: 74 RDSLIDKL 81
DS+ +
Sbjct: 739 ADSIHAHM 746
>gi|323168052|gb|EFZ53741.1| glycine cleavage system T protein [Shigella sonnei 53G]
Length = 347
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142
>gi|153217258|ref|ZP_01951022.1| glycine cleavage system T protein [Vibrio cholerae 1587]
gi|124113713|gb|EAY32533.1| glycine cleavage system T protein [Vibrio cholerae 1587]
Length = 376
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GVVTSGTAG 326
>gi|300936029|ref|ZP_07150977.1| glycine cleavage system T protein [Escherichia coli MS 21-1]
gi|300458821|gb|EFK22314.1| glycine cleavage system T protein [Escherichia coli MS 21-1]
Length = 364
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTRSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|297518394|ref|ZP_06936780.1| glycine cleavage system aminomethyltransferase T [Escherichia coli
OP50]
Length = 364
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV+ L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVVKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|109899893|ref|YP_663148.1| glycine cleavage system aminomethyltransferase T [Pseudoalteromonas
atlantica T6c]
gi|123360344|sp|Q15PU4|GCST_PSEA6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|109702174|gb|ABG42094.1| glycine cleavage system T protein [Pseudoalteromonas atlantica T6c]
Length = 359
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +L+ ++ DV L A S +L +G ++ ++ E +
Sbjct: 50 SHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R +D L +V I +P ++ +
Sbjct: 110 RLVVNSATRQKDMDWLNAQAEGFDVTITERPEFAMIAVQGPQA 152
>gi|323448967|gb|EGB04859.1| hypothetical protein AURANDRAFT_31886 [Aureococcus anophagefferens]
Length = 874
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 112/319 (35%), Gaps = 65/319 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ-GKILLYFLISKIEEDTF 65
S+ + + V G+ A +Q + DV + A + +L + G ++K+ +D F
Sbjct: 534 SSFAKLLVKGRDAEACMQRLCCGDVSVV--DRAVYTGMLNAEGGGYESDCTVTKLGDDEF 591
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEH---------------- 108
++ D + + L + +++ V+ E
Sbjct: 592 LVVSPTGSATRDADWIRRH-LTGDATLVDVSNQLAVLAVMGPESLNLLKACVTQPSVFDD 650
Query: 109 ----------TFSNSSFIDERFSIADVLLHRTW---------------GHNEKIASDIKT 143
+S +R + L + E ++D++
Sbjct: 651 FPFGASRALDIGHAASVRAQRITYVGELGFELYVPVESAAHVYRSLHAASAEHPSADLRD 710
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR + P + P +A + I +K +IG++ +++++
Sbjct: 711 CGYYAIDSLRTEKAYRAWGHELDP-FVTPFEAGLGFT--IDWSKD-FIGKDALAKLKKEP 766
Query: 199 IIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVV------GKKALAIARIDK--VDH 249
+ ++ + T +DLP G P+L D +G + G+ ALAI + + V
Sbjct: 767 LKQRVVALHTHEEDLPIWGNEPVLRDGELVGNVTTANYAHSLGGQVALAIVKHPEVGVKG 826
Query: 250 AIKKGM-ALTVHGVRVKAS 267
+K G + V G R+KA+
Sbjct: 827 FVKAGTYEIDVGGTRLKAT 845
>gi|297157023|gb|ADI06735.1| glycine cleavage system aminomethyltransferase T [Streptomyces
bingchenggensis BCW-1]
Length = 373
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 99/309 (32%), Gaps = 56/309 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I + G A L + + L AR + I G IL ++ ++ E F
Sbjct: 54 LSHMGEITLTGPQAGAALDRALVGHLSALAVGRARYTMICDADGGILDDLIVYRLGEQEF 113
Query: 66 ILEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF--- 120
++ + S ++D L+ L + V + + ++ + D
Sbjct: 114 LVVANASNAQVVLDALIERAEGLDAAVR-DDREAYALIAVQGPASAAILAGLTDADLDGL 172
Query: 121 ----------SIADVLLHRTWGHNEK-------IASDIKTYHE----------------- 146
+ L+ RT E + +
Sbjct: 173 KYYAGLPGTVAGVPALIARTGYTGEDGFELFVSPGDAERLWQALTEAGAPAGLVPCGLSC 232
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIG-QEVVSRIQHRNIIR 201
LR+ G+ + T P DA + + + K G ++G Q + + +
Sbjct: 233 RDTLRLEAGMPLYGHELTRGTT-PFDAGLGRV--VKFDKPGDFVGRQALEAAARRAETAP 289
Query: 202 KRPMI--ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAI-KK 253
R ++ + +P +G ++ D IG + L AIA +D A
Sbjct: 290 PRVLVGLVAAGRRVPRAGYAVVGADGAVIGEVTSGAPSPTLGKPIAIAYVDAAHAAPGTA 349
Query: 254 GMALTVHGV 262
G+++ + G
Sbjct: 350 GVSVDIRGT 358
>gi|229522959|ref|ZP_04412373.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TM 11079-80]
gi|229340176|gb|EEO05184.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TM 11079-80]
Length = 376
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GVVTSGTAG 326
>gi|87300391|gb|ABD37382.1| GcvT [Shigella boydii]
gi|87300393|gb|ABD37383.1| GcvT [Shigella dysenteriae]
gi|87300401|gb|ABD37387.1| GcvT [Shigella boydii]
gi|87300403|gb|ABD37388.1| GcvT [Shigella boydii]
gi|87300427|gb|ABD37400.1| GcvT [Shigella boydii]
gi|87300435|gb|ABD37404.1| GcvT [Shigella boydii]
Length = 138
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|291237444|ref|XP_002738645.1| PREDICTED: CG6415-like [Saccoglossus kowalevskii]
Length = 414
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 89/311 (28%), Gaps = 59/311 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK I F++++I DV LP S +G I ++SK ED + +
Sbjct: 96 KVYGKDRIQFIESLIVGDVAGLPDNTGTLSLFTNHKGGIQDDLIVSKTTEDYLYIVSNAG 155
Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVL------------------------- 102
D I + ++ V E ++
Sbjct: 156 CIDKDIANMKAQEVAMKSQGFDVTFEPITDRALLALQGPLMTKVLQNGIRSDLKDFTFMK 215
Query: 103 -----------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
+ E S I + D L+ E + +
Sbjct: 216 TAEMSVYGVPNCRVTRCGYTGEDGVEISIPIKHVLEVVDSLMSCQLA--EVKLAGLGARD 273
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D P +A + + + G E++ + Q + +++
Sbjct: 274 SLRLEAGLCLYGNDI-DEDTTPIEATLAWTIAKRRRQESNFPGAEIILK-QLKEKPKRKR 331
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+ I + +G+ IL + IG L A+ + K + +
Sbjct: 332 VGIVSSGPPARAGTQILDESGEPIGHLTSGCPSPTLKKNVAMGYVTTKHAKNGTKLKLQV 391
Query: 258 TVHGVRVKASF 268
+ +
Sbjct: 392 RKKQIDAQVCK 402
>gi|123969429|ref|YP_001010287.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. AS9601]
gi|166221564|sp|A2BTR9|GCST_PROMS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123199539|gb|ABM71180.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. AS9601]
Length = 370
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 52/305 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ I + G + ++Q + ++ + + +L +G I+ +I K +
Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFCEGQGLYTVMLNDKGGIIDDLIIYDLGIQKND 110
Query: 62 EDTFILEIDRSKRDSLIDK----LLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109
+L ++ S+ + L ++ + V++ +Q N G+ W +
Sbjct: 111 ISELLLIVNASRYEEDFQWIKNNLNMSEISITNFKKDKVLLALQGKNSFGLFEEWIESSI 170
Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144
+F I + FS + I +
Sbjct: 171 SHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFLISKNVAPCG 230
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D T P++A + L + +IG+ V+ I
Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FIGRRVLEEQSRLGIQ 288
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
+K + + G +L D IGT+ +A+A A I+ I +
Sbjct: 289 KKLVGLSIKGKAIGRKGCAVLKGDENIGTITSGSWSPTKHQAIAFAYINTSHALINNEVE 348
Query: 257 LTVHG 261
+ + G
Sbjct: 349 ILIRG 353
>gi|229514758|ref|ZP_04404219.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TMA 21]
gi|229348738|gb|EEO13696.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TMA 21]
Length = 376
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFKEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GVVTSGTAG 326
>gi|221116132|ref|XP_002161350.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 378
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ + FL+ ++ AD+ + S + +G I+ +I D + +
Sbjct: 66 IHGRDRVKFLEELVVADIKNMSENAGGLSLFMNAKGGIIDDCII-NNAGDHIYVVSNAGC 124
Query: 74 RDSLIDKLLFYKLRSNVIIEIQ 95
+ + L ++I
Sbjct: 125 AYKIKPLIEMQFLHRKTELDID 146
>gi|209546041|ref|YP_002277931.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209538898|gb|ACI58831.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 789
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 60/297 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +V G A LQ +T DV L SA+ G ++ + ++ +
Sbjct: 457 IDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDK 516
Query: 64 TF------------------------ILEIDRSKRDSLIDKLLFYKLRS--NVIIEIQP- 96
F + + ++ L K R II P
Sbjct: 517 NFRWIGGDDFSGVWLRQQAEKKGFKAWVRSSTDQMHNIA--LQGPKSRDILKEIIWTAPR 574
Query: 97 ------INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS----------- 139
+ + + F + + R L + + H + +
Sbjct: 575 QPTIGELEWFRFTVGRIGGFEGAPVVVSRTGYTGELGYEIFCHPKDALTVFDGVWEAGQP 634
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +RI G++ + +F T P +A + + + +IG++ + R
Sbjct: 635 HGLKPMGLEALDMVRIEAGLIFAHHEFTDQTD-PFEAGIGFTVPLKSKQDDFIGRDALIR 693
Query: 194 IQHRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ R + + ++ G + ++G + K +A+ARID
Sbjct: 694 --RKEHPRHLLVGLDVKANEAVGHGDCVHIGRAQVGVVTSATRSPILGKTIALARID 748
>gi|324115076|gb|EGC09041.1| glycine cleavage system T protein [Escherichia fergusonii B253]
Length = 364
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDFSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|171058244|ref|YP_001790593.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6]
gi|170775689|gb|ACB33828.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6]
Length = 374
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 54/292 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L++++ DV+ L R + G +L +I++ E+D F+
Sbjct: 56 SHMGQVRLIGSDADRALESLVPVDVVDLAIGKQRYAFFTNEAGGLLDDLMITRREDDLFL 115
Query: 67 LEIDRSKRDSLIDKLLFYK--------LRSNVIIEIQPINGVVLSWNQEHTFSNSSF--- 115
+ ++ + + I L+ + + + ++ +Q V + +F
Sbjct: 116 V-VNAGCKAADIRHLITHIGHRCQIVPMPDHALLALQGPQAVTALARLNAGVAGLTFMSG 174
Query: 116 ------------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
I + A L E + + LR+
Sbjct: 175 GHFALAGADCFVTRSGYTGEDGFEISVPATHAVALARSLLAQPEVQPAGLGARDTLRLEA 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D ++ P +A + G G Y G +V+ + KR
Sbjct: 235 GLCLYGHDI-HASTTPVEAGLTWAIQKVRRPGGA--RAGGYPGAKVIEGQLAQGPSHKRV 291
Query: 205 MIITGTDDLPPSGSPIL--TDDIEIGTLG------VVVGKKALAIARIDKVD 248
++ G+ ++ ++GT+ V A+A +
Sbjct: 292 GLVGLERAPVREGATLVDNHGSHKLGTVTSGTTGPSVNQPIAMAYVATNHAG 343
>gi|153827552|ref|ZP_01980219.1| glycine cleavage system T protein [Vibrio cholerae MZO-2]
gi|149738485|gb|EDM52881.1| glycine cleavage system T protein [Vibrio cholerae MZO-2]
Length = 376
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFS------ 121
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 122 --------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
A L + G E + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTGFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GIVTSGTAG 326
>gi|153829058|ref|ZP_01981725.1| glycine cleavage system T protein [Vibrio cholerae 623-39]
gi|148875487|gb|EDL73622.1| glycine cleavage system T protein [Vibrio cholerae 623-39]
Length = 376
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 84/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEINGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GVVTSGTAG 326
>gi|124003958|ref|ZP_01688805.1| glycine cleavage system T protein [Microscilla marina ATCC 23134]
gi|123990537|gb|EAY30017.1| glycine cleavage system T protein [Microscilla marina ATCC 23134]
Length = 365
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 90/284 (31%), Gaps = 52/284 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ A+ +Q + + D L + S + QG I+ +I I E+ +
Sbjct: 56 SHMGEFLLKGEGALDLIQKVSSNDASKLYPGRVQYSCLPNDQGGIVDDLVIYMIAENEYY 115
Query: 67 LEIDRSKRD-----------------SLIDKLLFYKLRS-NVIIEIQPINGVVLSWNQEH 108
L ++ S +L D+ ++ +Q + V L + +
Sbjct: 116 LVVNASNVQKDWDWISKHNTYGVEMTNLSDQTSMLAIQGPKATQALQSLTDVKLDDMKFY 175
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTYH---------- 145
TF ++F I + G E KI K YH
Sbjct: 176 TFEKATFAGVPDVIISATGYTGLGGVELYVPNEHAETIWNKIFEAGKDYHIQAIGLGARD 235
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK ++ E + + + + RK
Sbjct: 236 TLRLEKGYCLYGNDI-DDTTSPLEAGLGWV--TKFTKD-FVNSEALKKQKEEGVKRKLVA 291
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIA 242
+P G +L TD IG + L
Sbjct: 292 FKMVDKGIPRHGYELLDTDGKNIGKVTSGSMSPSLNIGIGLGYV 335
>gi|325285204|ref|YP_004260994.1| Aminomethyltransferase [Cellulophaga lytica DSM 7489]
gi|324320658|gb|ADY28123.1| Aminomethyltransferase [Cellulophaga lytica DSM 7489]
Length = 361
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 99/316 (31%), Gaps = 53/316 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + + D L A+ S + G I+ ++ K++++ ++
Sbjct: 49 SHMGEFLIEGPNALDLIQKVTSNDASKLVVGKAQYSCLPNETGGIVDDLIVYKLKDEQYL 108
Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------NVIIEIQPINGVVLSWNQE 107
L ++ S D + + Y ++R+ I +Q + V L+ +
Sbjct: 109 LVVNASNIDKDWNHISKYNETINAEMRNISEGYSLLAIQGPKAIEAMQSVTSVDLAAIKF 168
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-----------------------IKTY 144
+TF + F I + G E + +
Sbjct: 169 YTFEVADFAGIDNVIISATGYTGSGGFEIYCKNEDVKQIWDNVFKAGLDFGIAPIGLAAR 228
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
LR+ G D +T P +A + + TK ++ E ++ + RK
Sbjct: 229 DTLRLEMGYCLYGNDINDNTS-PFEAGLGWI--TKFTKD-FVNSEALAEQKANGTERKLI 284
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMAL 257
+P I+ D +IG + L + + +
Sbjct: 285 AFELTERGIPRHDYDIVDADGAKIGVVTSGTMSPSLNKGIGLGYVPTALSSAGTEIFIQI 344
Query: 258 TVHGVRVKASFPHWYK 273
V +YK
Sbjct: 345 RKKAVAATVVKLPFYK 360
>gi|256072831|ref|XP_002572737.1| aminomethyltransferase [Schistosoma mansoni]
gi|238657901|emb|CAZ28969.1| aminomethyltransferase [Schistosoma mansoni]
Length = 450
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ +YL ++V GK + FL+++ AD+ LP S L G IL +I K +
Sbjct: 112 TYIYLQQ---MQVSGKDRVSFLESLTCADIEELPISSGTLSVFLLNSGGILDDTIIMKCK 168
Query: 62 EDTFILEIDRSKRDSLIDKLL 82
E + + + +I +
Sbjct: 169 EPYLYIVSNAACSSKIIAHVT 189
>gi|87300429|gb|ABD37401.1| GcvT [Shigella boydii]
Length = 138
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVNLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|265762735|ref|ZP_06091303.1| glycine cleavage system T protein [Bacteroides sp. 2_1_16]
gi|263255343|gb|EEZ26689.1| glycine cleavage system T protein [Bacteroides sp. 2_1_16]
Length = 361
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|302527130|ref|ZP_07279472.1| FAD dependent oxidoreductase [Streptomyces sp. AA4]
gi|302436025|gb|EFL07841.1| FAD dependent oxidoreductase [Streptomyces sp. AA4]
Length = 807
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 48/265 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
++V G ++ FLQ + T + + +L G + ++++E + F +
Sbjct: 497 VEVSGPGSLEFLQGLTTNQLAK-SVGSVTYTLMLDDAGGVRSDITVARLEPELFQVGING 555
Query: 68 -----------------------------------EIDRSKRDSLIDK--LLFYKLRSNV 90
++ + + L +++ R
Sbjct: 556 NIDVAYLRSRAPEGVRVVDTTGGTCCIGVWGPLARDLVQPLSAEDLSHTGLKYFRGRR-A 614
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
I P+ + LS+ E + + D + D L R IA+ ++ LR+
Sbjct: 615 RIAGVPVTILRLSYVGELGWEIYTSADNGQRLWDAL-WRAGQSLGVIAAGRGAFNSLRLE 673
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV-SRIQHRNIIRKRPMIITG 209
G TD P++A + + KG ++G+ + R + R R + +
Sbjct: 674 KGYRLWGTDMTTEHD-PYEAGVGF--AVRPAKGEFVGRAAIEGRSEETAARRLRCLTVDD 730
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV 234
+ P+ D G +
Sbjct: 731 GRTVVLGKEPVFVDGAAAGYVTSAA 755
>gi|254454805|ref|ZP_05068242.1| glycine cleavage T protein [Octadecabacter antarcticus 238]
gi|198269211|gb|EDY93481.1| glycine cleavage T protein [Octadecabacter antarcticus 238]
Length = 380
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 100/308 (32%), Gaps = 73/308 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A F+Q + D+ + + I G +L ++ ++ E+ F + + D
Sbjct: 67 VEITGPDAAKFVQILTPRDLSKMAVGQCKYILITNADGGLLNDPILLRLAENHFWISLAD 126
Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90
+S++D L +Y LR
Sbjct: 127 SDILLWAQGVAVHSGMDVQIVEPDVSPLQLQGPNSGLIMQELFGESIMD-LKYYWLR--- 182
Query: 91 IIEIQPINGVVL--SWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
+E+ I VV W+ E S + ER A + GH I
Sbjct: 183 EVELDGIPLVVSRTGWSSELGYELYLRDGSRGDLLWERIMAAGMEYGLKPGHTSSI---- 238
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI G++ + D T P++ D L + + +IG+ + RI+ R
Sbjct: 239 -----RRIEGGMLSYHADADIHT-NPYELGFDRLVNLDMDAD-FIGKAALRRIKDEGPKR 291
Query: 202 KRPMIITGTDDLPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALT 258
K+ ++ + L + I +IG + V R++K
Sbjct: 292 KQVGLVIDCEPLTGPNTMFWTINQGGADIGKVTSAVYSP-----RLEKNIALAMVAADAA 346
Query: 259 VHGVRVKA 266
V G V+
Sbjct: 347 VIGAEVEV 354
>gi|149913153|ref|ZP_01901687.1| aminomethyltransferase, glycin cleavage system T protein
[Roseobacter sp. AzwK-3b]
gi|149813559|gb|EDM73385.1| aminomethyltransferase, glycin cleavage system T protein
[Roseobacter sp. AzwK-3b]
Length = 405
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
I+V G A F+ +IT D + + + + +G IL ++ +++ D F
Sbjct: 66 IRVRGPDAEAFVNRVITRDATKIAPMRGKYTILCNEKGGILNDPVLLRLDRDEFW 120
>gi|53712595|ref|YP_098587.1| glycine cleavage system aminomethyltransferase T [Bacteroides
fragilis YCH46]
gi|60680808|ref|YP_210952.1| glycine cleavage system aminomethyltransferase T [Bacteroides
fragilis NCTC 9343]
gi|253563379|ref|ZP_04840836.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
3_2_5]
gi|59797696|sp|Q64WS3|GCST_BACFR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|81316124|sp|Q5LFT6|GCST_BACFN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|52215460|dbj|BAD48053.1| putative aminomethyltransferase [Bacteroides fragilis YCH46]
gi|60492242|emb|CAH07007.1| putative aminomethyltransferase [Bacteroides fragilis NCTC 9343]
gi|251947155|gb|EES87437.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
3_2_5]
gi|301162305|emb|CBW21850.1| putative aminomethyltransferase [Bacteroides fragilis 638R]
Length = 361
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|237839053|ref|XP_002368824.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma
gondii ME49]
gi|211966488|gb|EEB01684.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma
gondii ME49]
Length = 988
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI 38
V + + F++V G A FLQ ++T D+ L
Sbjct: 53 LVAVPKRRFLRVEGPDAASFLQGLVTQDLRYLESPH 88
>gi|315446061|ref|YP_004078940.1| glycine cleavage system protein T (aminomethyltransferase)
[Mycobacterium sp. Spyr1]
gi|315264364|gb|ADU01106.1| glycine cleavage system T protein (aminomethyltransferase)
[Mycobacterium sp. Spyr1]
Length = 763
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 95/293 (32%), Gaps = 57/293 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A LQA +T D+ L SA+ + G ++ + ++ ++ F
Sbjct: 432 LSALRKFEVLGPDAEALLQATLTRDIRRLSRGQVVYSAMCSESGGVVDDCTVLRLGDNNF 491
Query: 66 IL---EIDRSK-RDSLIDKLLFYKLRSNVI------IEIQP------INGVVLSWNQEHT 109
+ + ++L +++ + IQ ++G++ + +
Sbjct: 492 RFIGGDPHGGVWLRTQAERLGLHQVWIKDSTDQMHNLAIQGPASRAVLDGLIWTPPGQPA 551
Query: 110 F----------------SNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139
+ + R L + W H +
Sbjct: 552 LRDLGWFRFLTGRLDGPDGAPLLVSRTGYTGELGYEVWVHPGDAETLWDRLWDAGRPHGL 611
Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
++ +RI G+V +F T P +A + + ++G+ + ++
Sbjct: 612 TPLGLEALEMVRIEAGLVAGGHEFDDQTD-PFEAGIGFTVPLKTKTDDFVGR--AALVER 668
Query: 197 RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
+ ++ + + ++ G + ++G + ++A+ RI
Sbjct: 669 KAHPQRTLVGLRLDSNETTAQGDCVHLGRTQVGVVTSATRSPLLGASIALCRI 721
>gi|282861232|ref|ZP_06270297.1| glycine cleavage system T protein [Streptomyces sp. ACTE]
gi|282563890|gb|EFB69427.1| glycine cleavage system T protein [Streptomyces sp. ACTE]
Length = 371
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 103/309 (33%), Gaps = 57/309 (18%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ + V G A FL A++ + T+ AR + I+ G IL ++ ++ E
Sbjct: 52 LSHMGEVGVSGPQAAAFLNHALVGN-IATVGVGRARYTMIVAEDGGILDDLIVYRLGETE 110
Query: 65 FILEIDRSKRDSLIDKLL---------------FYKLRSNVI----------IEIQPING 99
+++ + ++D L Y L + V + ++G
Sbjct: 111 YMVVANAGNAQLVLDTLTERVAGFDAEVRDDRDAYALLA-VQGPASPAVLKSVTDADLDG 169
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIK 142
+ T + + R + E + +
Sbjct: 170 LKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWKALTEAGAPHGLVPCGLS 229
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI-- 199
LR+ G+ + + + P +A + + + K G ++G+E + R
Sbjct: 230 CRDTLRLEAGMPLYGHELTTA-LTPFEAGLGRV--VKFEKEGDFVGREALRAAAERAETA 286
Query: 200 -IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAI-KK 253
RK ++ +P +G ++ +G + L A+A +D A +
Sbjct: 287 PPRKLVGLVARGRRVPRAGFAVVVAGETVGEVTSGAPSPTLGKPIAMAYVDAAHAAPGTE 346
Query: 254 GMALTVHGV 262
G+A+ + G
Sbjct: 347 GVAVDIRGT 355
>gi|227822099|ref|YP_002826070.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234]
gi|227341099|gb|ACP25317.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234]
Length = 474
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 85/300 (28%), Gaps = 51/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ DVL L R P G IL +I+ D L ++ + +D+
Sbjct: 166 ADAALALERLVPVDVLGLAEGRQRYGLFTNPDGGILDDLMIANRG-DHLFLVVNAACKDA 224
Query: 77 LIDKLL--------FYKLRSNVIIEIQPINGVVL---SWNQ----------EHTFSNSSF 115
L L +I +Q + + W E + +
Sbjct: 225 DFAHLKEGLGDSCDVTLLDDRALIALQGPHAEAVLCELWADVASMRFMDVAEADLHDVTC 284
Query: 116 IDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
I R R H + +A + LR+ G+ D
Sbjct: 285 IISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSLRLEAGLCLYGNDID 344
Query: 162 PSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
T P +A ++ G + G + + R+R +
Sbjct: 345 TGTT-PVEAALEWAIQKSRRAGGERAGGFPGADRILAEFAGGTSRRRVGLRPEGRAPVRG 403
Query: 217 GSPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G+ + D + IG++ + G A+ + + + + V S
Sbjct: 404 GATLFADADGTVPIGSVTSGGFGPSIDGPVAMGYVETAHAGNGTQIFAEVRGKYLPVTVS 463
>gi|87300425|gb|ABD37399.1| GcvT [Shigella dysenteriae]
Length = 138
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGSVIDDLIVYYFTEDFF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|159899387|ref|YP_001545634.1| glycine cleavage system T protein [Herpetosiphon aurantiacus ATCC
23779]
gi|238687083|sp|A9B2Q5|GCST_HERA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|159892426|gb|ABX05506.1| glycine cleavage system T protein [Herpetosiphon aurantiacus ATCC
23779]
Length = 361
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 45/297 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G + F+Q I T D+ + + G I+ + D +++ +
Sbjct: 56 VTGPDSERFIQLIDTFDISKTAIGQSDYGIMCYEDGGIVDDIFTYHLGPDEWMVVANAGN 115
Query: 74 RDS----LIDKLLFYKL----RSN----------------VIIEIQPINGVVLSWNQEHT 109
+ L Y + RS + + + + T
Sbjct: 116 AEKDWAWLNQHTAGYDVVLTDRSQELAMIALQGPKAESLLAPLTDADVVNLAFHGITKAT 175
Query: 110 FSNSSFIDERFSIADVL----------LHRTWGHNEKIASD---IKTYHELRINHGIVDP 156
++ R + R W ++ + + LR G+
Sbjct: 176 VEGAAGYISRTGYTGEDGFELFLPAGEIERIWDRLLEVGATPIGLGARDSLRFEPGLALY 235
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
+ I P++A + + + L KG +IG E + I+ +R + +
Sbjct: 236 GHEIERD-INPYEAKLGWV--VKLDKGPFIGSEALHDIKANGPVRTLVGLEMTGRGIARQ 292
Query: 217 GSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G P++ D E+G + K LA A + I + + + V+A+
Sbjct: 293 GYPVVALDGSELGVVTTGMPSPSLGKNLAYALVKAGSLKIGAEVDVLIREKPVRATV 349
>gi|56681813|gb|AAW21506.1| putative aminomethyl transferase protein [Methylophaga
aminisulfidivorans]
Length = 684
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L+ I + G A+ FLQ ++T +V + SAI G ++ I ++ + F
Sbjct: 444 LTPLRKIDITGPDAVAFLQYVLTQNVRRMAVGEIAHSAICLETGGMIDDGTIFRMADQAF 503
>gi|73952357|ref|XP_546052.2| PREDICTED: similar to Dimethylglycine dehydrogenase, mitochondrial
precursor (ME2GLYDH) [Canis familiaris]
Length = 875
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/325 (16%), Positives = 98/325 (30%), Gaps = 74/325 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ ++ L + + + S +LTP+G++ +S
Sbjct: 541 IDLSPFGKFNIKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 598
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVIIE-IQPINGVVLSWNQEHT--- 109
F+L + LR +V I+ I GV+
Sbjct: 599 EFLLITGSGS--------ELHDLRWIEEEAVNGGYDVEIKNITDELGVLGIAGPHARKVL 650
Query: 110 --FSNSSFIDE--------------------RFSIADVLLHRTWGHNEKIAS-------- 139
+ D+ R S L + E A+
Sbjct: 651 QKLTAEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIVMDA 710
Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189
+ TY + LR+ ++ T P +A +D I L K +IG++
Sbjct: 711 GQEEGIDNFGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQ 767
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIA 242
+ +I+ + + R+ + TDD+ P G+ I D +G + A A
Sbjct: 768 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWFDGKVVGNTTSGTYSYSIQKSLAFAYV 827
Query: 243 RIDKVDHAIKKGMALTVHGVRVKAS 267
I+ + + L
Sbjct: 828 PIELSKVGQQVEVELLGRNYPASII 852
>gi|221502120|gb|EEE27864.1| protein phosphatases PP1 regulatory subunit, putative [Toxoplasma
gondii VEG]
Length = 967
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKI 38
V + + F++V G A FLQ ++T D+ L
Sbjct: 53 LVAVPKRRFLRVEGPDAASFLQGLVTQDLRYLESPH 88
>gi|89891313|ref|ZP_01202819.1| aminomethyltransferase, glycine cleavage complex protein T
[Flavobacteria bacterium BBFL7]
gi|89516344|gb|EAS19005.1| aminomethyltransferase, glycine cleavage complex protein T
[Flavobacteria bacterium BBFL7]
Length = 360
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A+ +Q + + D L A+ + + G I+ ++ KI+ED ++
Sbjct: 49 SHMGEFLISGPEALNLVQKVSSNDASKLTVGRAQYAYLPNETGGIVDDMIVYKIKEDQYL 108
Query: 67 LEIDRSKRDSLIDKLLFY 84
L ++ S D D + +
Sbjct: 109 LVVNASNIDKDWDHITKH 126
>gi|115657906|ref|XP_785085.2| PREDICTED: similar to Aminomethyltransferase [Strongylocentrotus
purpuratus]
gi|115961663|ref|XP_001187387.1| PREDICTED: similar to Aminomethyltransferase [Strongylocentrotus
purpuratus]
Length = 391
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK + F++++ ADV L S + G I+ +I++ ED + +
Sbjct: 71 RIYGKDRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAG 130
Query: 73 KRDSLIDKLL 82
D +
Sbjct: 131 CADKDQAHIK 140
>gi|115642063|ref|XP_001204364.1| PREDICTED: similar to Aminomethyltransferase, partial
[Strongylocentrotus purpuratus]
gi|115660595|ref|XP_001201403.1| PREDICTED: similar to Aminomethyltransferase, partial
[Strongylocentrotus purpuratus]
Length = 154
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK + F++++ ADV L S + G I+ +I++ ED + +
Sbjct: 58 RIYGKDRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAG 117
Query: 73 KRDSLIDKLL 82
D +
Sbjct: 118 CADKDQAHIK 127
>gi|94500172|ref|ZP_01306706.1| putative aminomethyltransferase [Oceanobacter sp. RED65]
gi|94427745|gb|EAT12721.1| putative aminomethyltransferase [Oceanobacter sp. RED65]
Length = 397
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S +KV G A L ++ DV + + + IL +G+I+ + ++DT+I
Sbjct: 45 SHYSKVKVEGDEAFDLLDLVVAGDVAEIRDEQTLYTVILNDEGEIITDLYVMN-DDDTYI 103
Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
L + DSLI L YK L +V IE + +++ +++ ++ + D
Sbjct: 104 LLCEHITADSLIALLEPYKEDL-DDVEIEDLTKSHAMIAVEGPYSWELATEVY----GMD 158
Query: 125 VLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
V+ + IA D T+ HG +F + P D +L + KG
Sbjct: 159 VIG---IPFHGFIALDEDTFILRAGKHG------EFGYKVVLPVDQAQELWDTFE-EKG 207
>gi|312963748|ref|ZP_07778219.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
gi|311281783|gb|EFQ60393.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
Length = 360
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L +G ++ ++ + E +
Sbjct: 50 SHMTVIDVTGPQAREWLRHLLANDVDRLHGCGRALYSAMLNERGGVVDDMIVYRT-ETGY 108
Query: 66 ILEIDRSKRD 75
L ++ + RD
Sbjct: 109 RLVVNAATRD 118
>gi|254501330|ref|ZP_05113481.1| Glycine cleavage T-protein C-terminal barrel domain [Labrenzia
alexandrii DFL-11]
gi|222437401|gb|EEE44080.1| Glycine cleavage T-protein C-terminal barrel domain [Labrenzia
alexandrii DFL-11]
Length = 380
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/310 (16%), Positives = 101/310 (32%), Gaps = 59/310 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-- 69
+++ G A F+Q + ++ + + I G ++ ++ ++ E+ F + I
Sbjct: 67 VEITGPDAAAFVQMLTPRNLSKMAVGQCKYILITNAAGGLINDPILLRLGENHFWISISD 126
Query: 70 ----------------DRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHT 109
D + + + L +S V+ Q I + W++E
Sbjct: 127 SDVLLWAQGVAINSGMDVTIGEPDVSPLQLQGPKSGMIMQVLFG-QEIMDLRYYWHREVE 185
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINHGI 153
I R + L + + + ++ T RI G+
Sbjct: 186 LDGIPLIVSRTGWSSELGYELYLRDGSRGDELWEKIMAAGVPLGLQPGHTSSIRRIEGGM 245
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+ + D T P + MD L +S+ +IG+ + RI+ + RK+ ++ G L
Sbjct: 246 LSYHADADMQT-NPFELCMDRLVDLSMDAD-FIGKAALQRIREAGVSRKQVGLLIGGAPL 303
Query: 214 PPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH---- 260
+ + D IG + V ALA+ G L V
Sbjct: 304 RGPNTTFWTVRKDGAAIGKVTSAVYSPRLQQNIALAMV----SADCDGLGTELQVDIPEG 359
Query: 261 -GVRVKASFP 269
V V P
Sbjct: 360 QEVAVIVEKP 369
>gi|126729463|ref|ZP_01745277.1| sarcosine oxidase, alpha subunit family protein [Sagittula stellata
E-37]
gi|126710453|gb|EBA09505.1| sarcosine oxidase, alpha subunit family protein [Sagittula stellata
E-37]
Length = 1008
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 81/270 (30%), Gaps = 53/270 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + T G + ++++I+EDTF+
Sbjct: 674 STLGKIIVKGPDAGRFLDMLYTNMMSTLKPGKCRYGLMCTENGFLTDDGVVARIDEDTFL 733
Query: 67 LEIDRSKRDSLIDKL-----------LFY---KLRSNVIIEIQPING------------- 99
D + + Y + I + N
Sbjct: 734 CHTTTGGADRIHAHMEEWLQTEWWDWKVYTANVTEAYAQIAVVGPNARNLLEKLGGMDVS 793
Query: 100 ----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTYHE-- 146
+ W ++ T R S + L + +K+ K Y
Sbjct: 794 KEAMAFMEW-KDGTLGGFPVRIYRISFSGELSYEIAVPASQGRALWDKLLEAGKEYDATP 852
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+R G + + T+ P D + IS K YIG+ +R N
Sbjct: 853 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKEDYIGKRAQARSYMDN 909
Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIEI 227
R + + + T + P G+ +
Sbjct: 910 PDRWQLVGLETVDGSVLPDGAYAASPGRNA 939
>gi|87300419|gb|ABD37396.1| GcvT [Shigella dysenteriae]
Length = 138
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|254821881|ref|ZP_05226882.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
intracellulare ATCC 13950]
Length = 271
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ A +T D+ + A+ + T G ++ + +++D
Sbjct: 55 SHLGKALVRGPGAARFVNAALTNDLNRIGPGKAQYTLCCTESGGVVDDLIAYYVDDDEIF 114
Query: 67 LEIDRSKRDSLIDKLL 82
L + + +++D L
Sbjct: 115 LVPNAANTAAVVDALQ 130
>gi|83943070|ref|ZP_00955530.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
gi|83846078|gb|EAP83955.1| aminomethyl transferase family protein [Sulfitobacter sp. EE-36]
Length = 371
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + T D+ R + QG+++ ++ + +D + L I
Sbjct: 65 VELSGPDAARLIQYLTTRDMSKTRIGQGRYVPMCDHQGRLINDPVLLMLAQDRYWLSIAD 124
Query: 72 S 72
S
Sbjct: 125 S 125
>gi|87300359|gb|ABD37366.1| GcvT [Shigella flexneri]
gi|87300361|gb|ABD37367.1| GcvT [Shigella flexneri]
gi|87300363|gb|ABD37368.1| GcvT [Shigella flexneri]
gi|87300365|gb|ABD37369.1| GcvT [Shigella boydii]
gi|87300367|gb|ABD37370.1| GcvT [Shigella flexneri]
gi|87300375|gb|ABD37374.1| GcvT [Shigella flexneri]
gi|87300379|gb|ABD37376.1| GcvT [Shigella flexneri]
gi|87300381|gb|ABD37377.1| GcvT [Shigella dysenteriae]
gi|87300383|gb|ABD37378.1| GcvT [Shigella dysenteriae]
gi|87300385|gb|ABD37379.1| GcvT [Shigella dysenteriae]
gi|87300387|gb|ABD37380.1| GcvT [Shigella dysenteriae]
gi|87300389|gb|ABD37381.1| GcvT [Shigella dysenteriae]
gi|87300395|gb|ABD37384.1| GcvT [Shigella dysenteriae]
gi|87300397|gb|ABD37385.1| GcvT [Shigella boydii]
gi|87300405|gb|ABD37389.1| GcvT [Shigella boydii]
gi|87300407|gb|ABD37390.1| GcvT [Shigella dysenteriae]
gi|87300409|gb|ABD37391.1| GcvT [Shigella boydii]
gi|87300411|gb|ABD37392.1| GcvT [Shigella boydii]
gi|87300413|gb|ABD37393.1| GcvT [Shigella boydii]
gi|87300415|gb|ABD37394.1| GcvT [Shigella boydii]
gi|87300417|gb|ABD37395.1| GcvT [Shigella boydii]
gi|87300421|gb|ABD37397.1| GcvT [Shigella boydii]
gi|87300423|gb|ABD37398.1| GcvT [Shigella boydii]
gi|87300437|gb|ABD37405.1| GcvT [Escherichia coli]
gi|87300439|gb|ABD37406.1| GcvT [Escherichia coli]
gi|87300441|gb|ABD37407.1| GcvT [Escherichia coli]
Length = 138
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|89068316|ref|ZP_01155726.1| putative sarcosine oxidase, alpha subunit [Oceanicola granulosus
HTCC2516]
gi|89046233|gb|EAR52291.1| putative sarcosine oxidase, alpha subunit [Oceanicola granulosus
HTCC2516]
Length = 993
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 105/323 (32%), Gaps = 65/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TLP R + + G ++ +++++++DT++
Sbjct: 660 STLGKIVVKGPDAGRFLDMLYTNMMSTLPVGRCRYGLMCSENGFLIDDGVVARLDDDTWL 719
Query: 67 LEIDRSKRDSLIDKL-----------LFY----------------KLRS--------NVI 91
D + + Y K R+ +V
Sbjct: 720 CHTTTGGSDRIHAHMEEWLQTEWWDWQVYTANLTEQYAQIAVVGPKARAVLEKLGGMDVS 779
Query: 92 IEI-------------QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138
+ QP+ +S++ E ++ ++ R L +
Sbjct: 780 ADALKFMDWRDGELGGQPVRVFRISFSGELSYEIATPAG-RGRELWDRLFEAGAEFGVMP 838
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K ++G+ R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLGW--AISKKKDDFLGKRAQERSHMTD 895
Query: 199 IIRKRPM-IITGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDK 246
R + + ++T + P G+ I+ D V G + +A+A + +
Sbjct: 896 PNRWQLVGLLTEDGSVLPDGAYIVEDGTNANGQRNVQGRVTSTYHSPTLGRGIAMALLHR 955
Query: 247 VDHAI-KKGMALTVHGVRVKASF 268
+ + A V G V A
Sbjct: 956 GPARMGEVVEANKVDGGTVAAKV 978
>gi|119504777|ref|ZP_01626855.1| sarcosine oxidase, alpha subunit family protein [marine gamma
proteobacterium HTCC2080]
gi|119459382|gb|EAW40479.1| sarcosine oxidase, alpha subunit family protein [marine gamma
proteobacterium HTCC2080]
Length = 966
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 100/318 (31%), Gaps = 57/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S I++ G A F+ I T L P R +A+ QG I+ + +++ ED
Sbjct: 638 IDVSTLGGIELRGPDAAEFMNRIYTYGFLKQPVGKTRYAALANEQGVIIDDGVAARLAED 697
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
F + + D + ++L + + + ++I + + N FS
Sbjct: 698 HFYVTATTTGVDRVYSEMLRWNAQWRLDLDIAQVTSAYSAVNVAGPFSRDVLEQAGCNIE 757
Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
+ I R + + + + +
Sbjct: 758 LSSESFPYLACREGMVAGIPARLMRVGFVGELGFELHVPSLMAQTLWDKLMVAGEPFNIK 817
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G + D P + + I+ K ++G+ V + +
Sbjct: 818 PFGVETQRLLRLEKGHIIIGQD-TDGMSHPGEVGLAW--AINRKKAFFVGRRSVDILMSQ 874
Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHA 250
+ R+ ++ + P G +L D +GT+ LA D
Sbjct: 875 PLKRQLVGFTLSPSAPKPEEGHLVLRDGDIVGTVTSCEYSPTLAKVIGLAYVHPDDAQPD 934
Query: 251 IKKGMALTVHGVRVKASF 268
+ + T GV V+A
Sbjct: 935 SEVTIR-TADGVCVQAPI 951
>gi|258543477|ref|YP_003188910.1| glycine cleavage system protein T [Acetobacter pasteurianus IFO
3283-01]
gi|256634555|dbj|BAI00531.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-01]
gi|256637613|dbj|BAI03582.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-03]
gi|256640665|dbj|BAI06627.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-07]
gi|256643722|dbj|BAI09677.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-22]
gi|256646777|dbj|BAI12725.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-26]
gi|256649830|dbj|BAI15771.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-32]
gi|256652818|dbj|BAI18752.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655874|dbj|BAI21801.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-12]
Length = 378
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ AD+ L + R + +G IL +++++ ED +L ++ + +++
Sbjct: 70 DDAALALEKLVPADIAALKHGRQRYTQFTNAKGGILDDLMVARL-EDGLLLVVNAACKEA 128
Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
++ L +L + ++E+Q ++ E + + F D+
Sbjct: 129 DLELLQ-SELVAECVVELQEDRALLALQGPEAEQTLAVFADD 169
>gi|114767317|ref|ZP_01446140.1| probable glycine cleavage system T protein [Pelagibaca bermudensis
HTCC2601]
gi|114540570|gb|EAU43644.1| probable glycine cleavage system T protein [Roseovarius sp.
HTCC2601]
Length = 811
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 85/273 (31%), Gaps = 52/273 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A LQ I D+ P + +L G I ++++ E++F +
Sbjct: 493 LEGPDAEAVLQEIAANDMSG-PVGRLTYTQMLNDHGGIEADLTVARLAEESFYIVTGTGF 551
Query: 74 RDSLIDKLLF----------------YKL----------------RSNV----------- 90
D + Y + R++V
Sbjct: 552 ATRDFDWIRRGIPEGANARLSDVTSGYAVLSLMGPKARDILARVTRADVSNAALPFGSAA 611
Query: 91 --IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + +S+ E + ++ ++ D L H + + + + LR
Sbjct: 612 RIAIAGAPVWALRVSYVGELGWELHLPVEYAATVYDAL-HMAGASHGLVDAGYRAIETLR 670
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G D P + P +A +D + L G + G+ ++ + + KR T
Sbjct: 671 LEKGYRAWGGDIGPDST-PLEAGLDF--AVKLDTGAFRGRAAIAAQKAAG-VSKRLATFT 726
Query: 209 GTDDLPPSG-SPILTDDIEIGTLGVVVGKKALA 240
++ G I + +G L L
Sbjct: 727 ADPEVILLGRETIFRNGERVGYLSSGGYGHTLG 759
>gi|91762946|ref|ZP_01264911.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718748|gb|EAS85398.1| putative aminomethyltransferase protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 775
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 97/297 (32%), Gaps = 58/297 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS ++ G A +Q +T +V L +A+ G +L + K+ +
Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSVGQVVYTAMCYENGCMLDDGTLFKLGQ 501
Query: 63 DTF-ILEIDRSKRDSLIDKLLF--YKLRSN----------------------------VI 91
D F + D + L ++ YK+ +
Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKNYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTPPIQ 561
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139
I + + + + + I R L + W H + A
Sbjct: 562 PSITELEWFRFNIARIDHETGTPIIISRTGYTGELGYEIWCHPKDAAEVWDKVWEAGKEF 621
Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
++ +RI G++ +F T P +A + + + +IG+E + I
Sbjct: 622 NITPLGLEALDMVRIEAGLIFYGYEFDDQTD-PFEAGIGFTVPLKTKEDDFIGKEEL--I 678
Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV-----VGKKALAIARID 245
+ + +K+ + + P G + ++G + +GK +A+ +ID
Sbjct: 679 KRKANPQKKLVGLELVGHEPAVNGDCVHVGRGQVGVITSGMLSPKLGKN-IALCKID 734
>gi|229526103|ref|ZP_04415507.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae bv. albensis VL426]
gi|254225953|ref|ZP_04919554.1| glycine cleavage system T protein [Vibrio cholerae V51]
gi|125621487|gb|EAZ49820.1| glycine cleavage system T protein [Vibrio cholerae V51]
gi|229336261|gb|EEO01279.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae bv. albensis VL426]
Length = 376
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GIVTSGTAG 326
>gi|301621821|ref|XP_002940239.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 870
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ V GK +I L + + + S ILTP+G++ +S++
Sbjct: 539 IDLTPFGKFTVKGKDSIHLLDHLFANTIPKV--GFTNISHILTPRGRVYAELTVSQLSPG 596
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----IDE- 118
F+L + + +R +I + + + D+
Sbjct: 597 EFLLITGSGSELHDLRWIEEVTVRGKYNTDIANVTDEIGVLGIAGPLARKVLQKLTPDDL 656
Query: 119 -----------------------RFSIADVLLHRTWGHNEKIAS---------------D 140
R S L + + ++ +
Sbjct: 657 GNTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGQEEGIDN 716
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ G + T P +A + I L K +IG++ +++I+ +
Sbjct: 717 FGTYAMNALRLEKGFRAWGAEMNCDT-NPLEAGLQYF--IKLNKPADFIGKQALTKIKEK 773
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
+ RK + TD++ P G+ + + +G A A ++
Sbjct: 774 GLQRKLVYLTLNTDNVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTG 833
Query: 251 IKKGMALTVHGVRVKAS 267
K + L +
Sbjct: 834 QKLEVELLGNKYPATVI 850
>gi|86142202|ref|ZP_01060712.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217]
gi|85830954|gb|EAQ49411.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217]
Length = 360
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G+ A+ LQ + + D+ L A+ + + +G I+ ++ +I E+ ++L ++ S +
Sbjct: 58 GEQALELLQKVCSNDISKLKVGGAQYNCLPNNEGGIVDDLIVYRIRENEYLLVVNASNIE 117
>gi|324515608|gb|ADY46258.1| Aminomethyltransferase [Ascaris suum]
Length = 402
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 103/309 (33%), Gaps = 54/309 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ GK + F++++ TADV L S +G I +++K + + +
Sbjct: 80 HITGKDRVEFIESLTTADVQGLQDNQGTLSVFTNERGGIKDDLIVTKTDLGYIYMVTNAG 139
Query: 73 KRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSW--------NQEHTFSNS------ 113
D + L + R V ++ G+V E F S
Sbjct: 140 CIDKDLPYLLEKSEEWRKKGKDVEVKPLEGRGLVAVQGPGMAKLLQGETDFDLSKLYFMH 199
Query: 114 SFIDERFSIADVLLHRTWGHNEKIA--------------------------SDIKTYHEL 147
S + F I D + R E + + L
Sbjct: 200 STVGTVFGIRDCRVTRCGYTGEDGVEISVEPRYAAELVENLLRSTKEKVRMAGLGARDAL 259
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE-VVSRIQHRNIIRKRPM 205
R+ G+ D +T P +A + + + + G E +VS+++ +N ++R
Sbjct: 260 RLEAGLCLYGNDIDENTT-PVEAGLAFVVAKRRRQTKDFPGAEVIVSQLEKKNWPKRRVG 318
Query: 206 IITGTDDLPPSGSPILT--DDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259
+++ P S PI+ +G + L +A +DK D + K + +
Sbjct: 319 LLSDKGRAPRSHLPIIDPISKAVVGFVTSGCPSPNLKKNIGMAYVDKQDSKVGKELMVDF 378
Query: 260 HGVRVKASF 268
G + K +
Sbjct: 379 GGRQSKVTV 387
>gi|229527754|ref|ZP_04417145.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 12129(1)]
gi|229334116|gb|EEN99601.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 12129(1)]
Length = 376
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR ++ T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GIVTSGTAG 326
>gi|124026866|ref|YP_001015981.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. NATL1A]
gi|166221561|sp|A2C5F7|GCST_PROM1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123961934|gb|ABM76717.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. NATL1A]
Length = 372
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ GK+ LQ ++ +DV + A + L G I +I
Sbjct: 51 SHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTN 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQEHTFSNSSFIDE 118
E++ +L I+ ++++S ++ L L S I I P ++ E + ++E
Sbjct: 111 EESVVLVINAARKESDVEWLS-SNL-SKKEITISEFMPEGALIAIQGPESISTLEKILEE 168
Query: 119 RFSIADVLLHRTWGHNEKI 137
S HRT N +
Sbjct: 169 PLSNLPRFGHRTITSNPNL 187
>gi|332307934|ref|YP_004435785.1| glycine cleavage system T protein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175263|gb|AEE24517.1| glycine cleavage system T protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 359
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G+ A +L+ ++ DV L A S +L +G ++ ++ E +
Sbjct: 50 SHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L ++ + R +D L +V I +P ++ +
Sbjct: 110 RLVVNSATRQKDMDWLNGQAEGFDVTITERPEFAMIAVQGPQA 152
>gi|307136227|gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]
Length = 407
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 80/269 (29%), Gaps = 52/269 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK +IPFL+ ++ ADV L + +G + +I+K+ +D L ++
Sbjct: 89 LSLKGKDSIPFLEKLVVADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 72 S---------------------------------------KRDSLIDKLLFYKLRSNV-- 90
++ L L S +
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQYLTKDDL-SKLYF 207
Query: 91 -IIEIQPINGV-----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
I ING + E F S + +A +L ++ G +
Sbjct: 208 GEFRILDINGARCFLTRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTG--LGAR 265
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKR 203
LR+ G+ D I P +A + G +G ++G EV+ + +R
Sbjct: 266 DSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRRAEGGFLGAEVILKQLEDGPAIRR 324
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ IG +
Sbjct: 325 VGFFSSGPPARSHSEIQNEGGKNIGEVTS 353
>gi|189425731|ref|YP_001952908.1| glycine cleavage system protein T [Geobacter lovleyi SZ]
gi|189421990|gb|ACD96388.1| glycine cleavage system T protein [Geobacter lovleyi SZ]
Length = 366
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 93/276 (33%), Gaps = 48/276 (17%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKL 81
+ T + +P ++ +L QG I+ ++ ++ D ++ ++ + + + +L
Sbjct: 75 LFTFSISAIPVGRSKYGFLLNEQGGIIDDLIVFRMAADEVMIVVNAATAPNDFKVIQSRL 134
Query: 82 LFYKLRSNVIIEIQPIN-----------GVVLSWNQE--------HTFSNSSFIDERFSI 122
S++ ++ ++ W E T I R
Sbjct: 135 KG-GQFSDITAATAKLDLQGPRSREVLVDLLGGWVAEIPYFKFVQQTVLGVPAIVSRTGY 193
Query: 123 ADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
L + + +K+ + + LR+ G +D P
Sbjct: 194 TGELGYEIFLPADKVGELWEKLLADERVKPAGLGARDVLRLEVGYSLYGSDI-DEATTPL 252
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIG 228
+A + + L K ++G+E + + Q + + R + + P G I + +IG
Sbjct: 253 EADLAAF--VKLDKQ-FVGKEALLKQQKQPLKRVKVAFKVTSRRTPRHGFGIFDGERQIG 309
Query: 229 TLGVVVGKK----ALAIARIDKVDHAIKKGMALTVH 260
+ V + + ++ A+ G ALT+
Sbjct: 310 EVTSGVFSPMLGCGIGLGYVEPGYAAL--GTALTIK 343
>gi|332752942|gb|EGJ83326.1| glycine cleavage system T protein [Shigella flexneri 4343-70]
gi|333000083|gb|EGK19666.1| glycine cleavage system T protein [Shigella flexneri K-218]
Length = 347
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 33 SHMTIVDLRGSRTREFLRYLLANDVAKLTKRGKALYSGMLNASGGVIDDLIVYYFTEDFF 92
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 93 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 142
>gi|295134431|ref|YP_003585107.1| glycine cleavage system aminomethyltransferase T [Zunongwangia
profunda SM-A87]
gi|294982446|gb|ADF52911.1| glycine cleavage system aminomethyltransferase T [Zunongwangia
profunda SM-A87]
Length = 360
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 97/312 (31%), Gaps = 53/312 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G++A+ +Q I + D L A+ + + +G I+ +I ++ + ++
Sbjct: 49 SHMGEFLVTGENALALIQLISSNDASKLVDGQAQYTCMPNEKGGIVDDMIIYRMNAEKYL 108
Query: 67 LEIDRSKRDS----LIDKLLFYK----------LRS----NVIIEIQPINGVVLSWNQEH 108
L ++ + + + L + +Q + V LS + +
Sbjct: 109 LVVNAANIEKDWNWISKHNTMDANLTDLSEELSLLAIQGPKAAEAMQSLTDVDLSAMKFY 168
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------H 145
TF +F I + G E K+ K Y
Sbjct: 169 TFEIGTFAGMEKVIISATGYTGSGGFEIYFKNECAQEIWDKVMEAGKDYGIQPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK +I E + + + RK
Sbjct: 229 TLRLEMGFCLYGNDI-DDTTSPIEAKLGWI--TKFTKD-FINAEALKQEKEEGPKRKLVA 284
Query: 206 IITGTDDLPPSGSPILTDDIEI-GTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G I+ D+ E+ G + L + + K + +
Sbjct: 285 FELDERGIPRQGYDIVNDEGEVIGNVTSGTMSPSLEKGIGLGYVKSEYTGFGKKINIQIR 344
Query: 259 VHGVRVK-ASFP 269
V P
Sbjct: 345 KKAVSATQVKLP 356
>gi|149187585|ref|ZP_01865882.1| glycine cleavage system protein T2 [Vibrio shilonii AK1]
gi|148838465|gb|EDL55405.1| glycine cleavage system protein T2 [Vibrio shilonii AK1]
Length = 377
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 100/272 (36%), Gaps = 44/272 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L++++ D++ LP R + +G I+ +++ + D
Sbjct: 59 SHMGQVRLYGENAAKILESLVPVDIIDLPEGKQRYAFFTNEEGGIMDDLMVANLG-DHLF 117
Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+ ++ + ++ I L + ++ +Q + + ++ F+D
Sbjct: 118 VVVNAACKEQDITHLEAHLTDGVEMEVIEDRALLALQGPKAAEVLARVQPEVADMLFMDV 177
Query: 119 R----------FSIADVLLHRTW------GHNEKIASDIKTYHE-----------LRINH 151
R S + + + E +A + + E LR+
Sbjct: 178 RKLDINGVECIVSRSGYTGEDGYEISVPSANAEALAKSLTDFEEVEWIGLGARDSLRLEC 237
Query: 152 GIVDPNTDFLPSTIFPHDALM-----DLLNGISLTKGCYIGQEVVSR-IQHRNIIRKRPM 205
G+ D T P +A + + G + G +++ + I+ +++ RKR
Sbjct: 238 GLCLYGHDLDT-TTTPVEASLLWGIQKVRRADGERAGGFPGADIILKQIETKDVARKRVG 296
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK 236
++ T G+ + +D EIG +
Sbjct: 297 LVGQTKAPVREGAKLFDANDNEIGIVTSGTAG 328
>gi|145225710|ref|YP_001136388.1| aminomethyltransferase [Mycobacterium gilvum PYR-GCK]
gi|145218196|gb|ABP47600.1| Aminomethyltransferase [Mycobacterium gilvum PYR-GCK]
Length = 757
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 92/293 (31%), Gaps = 57/293 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A LQA +T D+ L SA+ + G ++ + ++ ++ F
Sbjct: 426 LSALRKFEVLGPDAEALLQATLTRDIRRLSRGQVVYSAMCSESGGVVDDCTVLRLGDNNF 485
Query: 66 IL---EIDRSK-RDSLIDKLLFYKLRSN----------VII--EIQPINGVVLSWNQEHT 109
+ + ++L +++ V ++G++ + +
Sbjct: 486 RFIGGDPHGGVWLRTQAERLGLHQVWIKDSTDQMHNLAVQGPASRAVLDGLIWTPPGQPA 545
Query: 110 F----------------SNSSFIDERFSIADVLLHRTWGHNEKIAS-------------- 139
+ + R L + W H +
Sbjct: 546 LRDLGWFRFLTGRLDGPDGAPLLVSRTGYTGELGYEVWVHPGDAETLWDRLWDAGRPHGL 605
Query: 140 ---DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
++ +RI G+ +F T P +A + + ++G+ + ++
Sbjct: 606 TPLGLEALEMVRIEAGLAAGGHEFDDQTD-PFEAGIGFTVPLKTKTDDFVGR--AALVER 662
Query: 197 RNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARI 244
+ ++ + + ++ G + ++G + ++A+ RI
Sbjct: 663 KAHPQRTLVGLRLDSNETTAHGDCVHLGRTQVGVVTSATRSPLLGASIALCRI 715
>gi|295395101|ref|ZP_06805310.1| glycine cleavage system T protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294972049|gb|EFG47915.1| glycine cleavage system T protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 378
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/321 (12%), Positives = 102/321 (31%), Gaps = 79/321 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPY------KIARGSAILTPQGKILLYFLISK 59
LS+ ++V G A +L D L A+ ++ G ++ + +
Sbjct: 49 LSHMGEVRVKGAQAGDYL------DYAMLSKYSTMKVGKAKYGLLIDENGHLIDDLITYR 102
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLR----------SNVIIEIQPINGVVLSWNQEHT 109
+ +D +++ + S + ++ R ++V + + + +++ +
Sbjct: 103 LADDEYLIVPNASNTPADVEAFTK---RVEAFLAANPGADVTVTDESADTALIAVQGPAS 159
Query: 110 -------------------FSNSSFIDERFSIADVLLHRT-------------------- 130
+ ++ + D+LL RT
Sbjct: 160 EDILLSTQDTEEGRNAIKELAYYAWAPLKVGGLDILLARTGYTGEDGFELYLPNAGAQEL 219
Query: 131 WGHNEKIASD-------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-NGISLTK 182
W K +D + LR+ G+ + + I P +A M + G K
Sbjct: 220 WNVLTKAGADFDLKPAGLAARDSLRLEAGMPLFGNELT-NDITPVEAGMGGMVAGALKNK 278
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GK 236
++G+E + ++ + R + + SG+ + + +G +
Sbjct: 279 TEFVGREALEKLDTSKVDRTLVGLSSSGRRAARSGAELKAGEQTVGVITSGQPSPTLGHP 338
Query: 237 KALAIARIDKVDHAIKKGMAL 257
ALA +D+ + + +
Sbjct: 339 IALAYVDVDQAEAGTELEADI 359
>gi|255008020|ref|ZP_05280146.1| glycine cleavage system aminomethyltransferase T [Bacteroides
fragilis 3_1_12]
gi|313145736|ref|ZP_07807929.1| aminomethyltransferase [Bacteroides fragilis 3_1_12]
gi|313134503|gb|EFR51863.1| aminomethyltransferase [Bacteroides fragilis 3_1_12]
Length = 361
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + G I+ L+ + E + ++L ++ S
Sbjct: 56 VKGPHALAFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|121587119|ref|ZP_01676895.1| glycine cleavage system T protein [Vibrio cholerae 2740-80]
gi|121728088|ref|ZP_01681125.1| glycine cleavage system T protein [Vibrio cholerae V52]
gi|147671841|ref|YP_001215785.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|153819585|ref|ZP_01972252.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457]
gi|227811903|ref|YP_002811913.1| glycine cleavage system T protein [Vibrio cholerae M66-2]
gi|229506565|ref|ZP_04396074.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae BX 330286]
gi|229510639|ref|ZP_04400119.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae B33]
gi|229517230|ref|ZP_04406675.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC9]
gi|229606044|ref|YP_002876748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae MJ-1236]
gi|254850520|ref|ZP_05239870.1| glycine cleavage system T protein [Vibrio cholerae MO10]
gi|255745920|ref|ZP_05419867.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholera CIRS 101]
gi|262163522|ref|ZP_06031268.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae INDRE 91/1]
gi|262168220|ref|ZP_06035918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC27]
gi|298500126|ref|ZP_07009932.1| glycine cleavage system T protein [Vibrio cholerae MAK 757]
gi|121548655|gb|EAX58705.1| glycine cleavage system T protein [Vibrio cholerae 2740-80]
gi|121629636|gb|EAX62057.1| glycine cleavage system T protein [Vibrio cholerae V52]
gi|126509867|gb|EAZ72461.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457]
gi|146314224|gb|ABQ18764.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|227011045|gb|ACP07256.1| glycine cleavage system T protein [Vibrio cholerae M66-2]
gi|227014948|gb|ACP11157.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|229345266|gb|EEO10239.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC9]
gi|229353084|gb|EEO18024.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae B33]
gi|229356916|gb|EEO21834.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae BX 330286]
gi|229372530|gb|ACQ62952.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae MJ-1236]
gi|254846225|gb|EET24639.1| glycine cleavage system T protein [Vibrio cholerae MO10]
gi|255735674|gb|EET91072.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholera CIRS 101]
gi|262023463|gb|EEY42166.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC27]
gi|262028089|gb|EEY46748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae INDRE 91/1]
gi|297542107|gb|EFH78158.1| glycine cleavage system T protein [Vibrio cholerae MAK 757]
Length = 376
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 138 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 197
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 198 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 257
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR +I T G+ + +I
Sbjct: 258 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 317
Query: 228 GTLGVVVGK 236
G +
Sbjct: 318 GIVTSGTAG 326
>gi|319780439|ref|YP_004139915.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166327|gb|ADV09865.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 376
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/318 (12%), Positives = 99/318 (31%), Gaps = 63/318 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + + G A + +I + + R S + G I+ + ++ + F
Sbjct: 56 LSTMGKMDIKGPDAEALVNHVIVNNAAAMKPGQVRYSTVCREDGGIMDDLTVFRLGPEHF 115
Query: 66 ILEIDRSKRDSLIDKLLFYKL---------------------RS----NVIIEIQPINGV 100
+L R ++ LL + RS +I ++G+
Sbjct: 116 MLVTGSVNRLKMLPWLLHHAQGRKAYVTDITAAIAFPTIQGPRSRELLKAMISDADLDGL 175
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT--YHELR---------- 148
+ +F++ R I+ + G + +D + L
Sbjct: 176 -----KRWSFTSGHINGTRVLISRTGVTGELGFELFVPADEAASVWDALMRTGRDFGLKP 230
Query: 149 ----------INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ D + P +D I KG ++G++ + +++ +
Sbjct: 231 YGVLAMFTLGLEKAYPAHGIDM-DESRTPFHVGLDRW--IKFDKGDFVGRQALLKVRDKG 287
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH------AIK 252
+ + +I D + + +L D + G + ++ ++ H AI
Sbjct: 288 LDEQWVGLILDGDKPAATDARVLADGEDAGIVT--YSDHGYSLGKVLATAHLRLPFTAIG 345
Query: 253 KGMALTVHGVRVKASFPH 270
+++ + G +A
Sbjct: 346 TELSIDIDGRPTRAVVAP 363
>gi|255554837|ref|XP_002518456.1| aminomethyltransferase, putative [Ricinus communis]
gi|223542301|gb|EEF43843.1| aminomethyltransferase, putative [Ricinus communis]
Length = 407
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK +PFL+ ++ ADV L + + +G + +I+K++
Sbjct: 79 SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAHGTGTLTVFTNEKGGAIDDSVITKVK 138
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
+D + ++ ++ L
Sbjct: 139 DDLLYIVVNAGCRDKDLAHIEEHMKAFKTKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 198
Query: 83 FYKLRSNVIIEIQPINGVVLSW--------NQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + + + S E F S + +A +L ++ G
Sbjct: 199 KEDL-SKIYFGEFHMIDINGSHCFLTRTGYTGEDGFEISVASEHAVDLAKAILEKSEGKI 257
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G EV+ +
Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRKSEGGFLGAEVILK 314
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+R + T + P S S I D IG +
Sbjct: 315 QLAEGPKIRR-VGFTSSGPPPRSHSEIQNDKGENIGEITS 353
>gi|257055902|ref|YP_003133734.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
gi|256585774|gb|ACU96907.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
Length = 819
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 50/267 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
I+V G A+ LQ + T + + +L G I ++++ E+ F
Sbjct: 507 IEVSGPGALGLLQRLTTGRMDR-SVGSVTYTLMLDEAGGIRSDVTVARLGEELFQVGANG 565
Query: 67 -LEID-------------------------------RSKRDSLI------DKLLFYKLRS 88
L++D R L + L +++LR
Sbjct: 566 NLDLDYLLRQARDEPGVQVRDITGGTCCIGVWGPLARDLVQPLSGDDFSNEALKYFRLRR 625
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + LS+ E + + + + DVL IA+ ++ LR
Sbjct: 626 -AHIGGIPVIAMRLSYVGELGWEIYTSAEYGMRLWDVL-WEAGRPLGAIAAGRAAFNSLR 683
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G D P++A + ++ K Y+G E ++ +++ R+ +
Sbjct: 684 LEKGYRSWGNDMTTEH-NPYEAGLGF--AVNKKKTGYVGYEAIAGLENETPARRLTCLTV 740
Query: 209 GTDDLPPSGS-PILTDDIEIGTLGVVV 234
GS P+ D +G +
Sbjct: 741 DDGRSVVMGSEPVFLDGDAVGYVTSAA 767
>gi|147906134|ref|NP_001090416.1| aminomethyltransferase [Xenopus laevis]
gi|114108200|gb|AAI23374.1| MGC154901 protein [Xenopus laevis]
Length = 404
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 87/271 (32%), Gaps = 46/271 (16%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68
KV GK IPF+++++ AD+ L S +G I+ +++K + +
Sbjct: 89 KVLGKDRIPFMESMVVADIAELKENQGTLSLFTNEKGGIIDDLIVTKTSDGYLYVVSNAG 148
Query: 69 IDRSKRDSLIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+++KL +K +V +E + + + D+
Sbjct: 149 CSEKDSAHMLNKLQAFKAAGRDVDLEHIDCALLAVQGPLSARVLQAGLTDDLSKLTFMTS 208
Query: 119 ----RFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRIN 150
F I + R +++ + + LR+
Sbjct: 209 VYTTVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSLRLE 268
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P +A + G + G V+ Q + ++ + + +T
Sbjct: 269 AGLCLYGNDI-DETTTPVEASLVWTLGKRRRTAMDFPGASVIV-PQIKGKVKHKRVGLTS 326
Query: 210 TDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239
T +PIL + IG + +L
Sbjct: 327 TGPPVRQHAPILNLEGRVIGEVTSGCPSPSL 357
>gi|284929690|ref|YP_003422212.1| aminomethyltransferase [cyanobacterium UCYN-A]
gi|284810134|gb|ADB95831.1| aminomethyltransferase [cyanobacterium UCYN-A]
Length = 373
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 94/274 (34%), Gaps = 60/274 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP----------------QGK 50
S+ + + G +P LQ+++ +D+ L A+ + L +
Sbjct: 57 SHMGKLLIEGDDLVPLLQSLVPSDIKKLAPGKAQYTTFLNSAGGIIDDIIIYYQNSRKAL 116
Query: 51 IL-------------------LYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91
I+ I+ + ++ +L + + KL + V
Sbjct: 117 IITNSSTKDKDIKWIKLNAESTSIKITDLSQEKVLL---AIQGPQALKKLQLF-----VD 168
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFI-------DERFSIA-----DVLLHRTWGHNEK-IA 138
I+I ++ + S+FI ++ F + L + +EK +
Sbjct: 169 IDITNLS--FFEHIETEILGCSAFISRTGYTGEDGFEVMVSNVIGKKLWKLLVDDEKVVP 226
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ LR+ + D +T P +A + L + +KG +IG+EV+ + +
Sbjct: 227 CGLGARDTLRLEASMCLYGQDINDNTT-PLEAGLHKLVHLD-SKGDFIGREVLEKQTNEG 284
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ + ++ + G I + ++ T+
Sbjct: 285 VGKLLVVLEMEGKQIARRGYNIFSHGKQVSTITS 318
>gi|298384348|ref|ZP_06993908.1| glycine cleavage system T protein [Bacteroides sp. 1_1_14]
gi|298262627|gb|EFI05491.1| glycine cleavage system T protein [Bacteroides sp. 1_1_14]
Length = 361
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAAN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|29349992|ref|NP_813495.1| glycine cleavage system aminomethyltransferase T [Bacteroides
thetaiotaomicron VPI-5482]
gi|253572763|ref|ZP_04850163.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
1_1_6]
gi|31340122|sp|Q89YZ6|GCST_BACTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|29341903|gb|AAO79689.1| putative aminomethyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837663|gb|EES65754.1| glycine cleavage system aminomethyltransferase T [Bacteroides sp.
1_1_6]
Length = 361
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ FLQ + + +V L + + +G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAAN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|313225569|emb|CBY07043.1| unnamed protein product [Oikopleura dioica]
Length = 375
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 95/294 (32%), Gaps = 53/294 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G+SAI ++++ TADV L + QG IL +++KI + + + S
Sbjct: 63 RITGESAIAAIESVCTADVAALSDNSGSLALFTNQQGGILDDLIVNKISSEEIYVVSNAS 122
Query: 73 KRD---SLID--------KLLFYKLRSNVIIEIQPINGV---------------VLSWNQ 106
+ +++ KL + +I +Q +
Sbjct: 123 MAEQDFAILKNAAEIFDCKLEKIET---ALIAVQGPKAAELLQKGTSLDLSKLSFMQGAD 179
Query: 107 EHTFSNSSFIDER-------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
F S R + A + + + + + + LR+ G+
Sbjct: 180 LTLFGTSGIRATRCGYTGEDGFELSIPAEAVETITKQLIEDGALMAGLGARDTLRLEAGL 239
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG-QEVVSRIQHRNIIRKRPMIITGTDD 212
D +T+ P L+ + +G + G E+V + + + ++ +I
Sbjct: 240 CLYGNDIDETTLPPSAVLLFTVPKSRRAQGNFPGCAEIVKQQKTKPEEKRVGLIFQKGKP 299
Query: 213 LPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260
G+ + D +IG + + ++ K G L V
Sbjct: 300 PARQGAELFNDGEKIGRVTSGGPSPTLGRNIGMGYVPLE----LTKPGTKLQVK 349
>gi|238921211|ref|YP_002934726.1| glycine cleavage system T protein, [Edwardsiella ictaluri 93-146]
gi|259647492|sp|C5BAT2|GCST_EDWI9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|238870780|gb|ACR70491.1| glycine cleavage system T protein, putative [Edwardsiella ictaluri
93-146]
Length = 374
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A SA+L G ++ ++ + + F
Sbjct: 50 SHMTIVDLHGVRVRDFLRHLLANDVARLTQPGKALYSAMLNASGGVIDDLIVYFMADHHF 109
Query: 66 ILEIDRSKRDSLIDKL 81
L ++ + R+ + +
Sbjct: 110 RLVVNSATRERDLAWI 125
>gi|22298287|ref|NP_681534.1| putative aminomethyltransferase [Thermosynechococcus elongatus
BP-1]
gi|31340141|sp|Q8DKV6|GCST_THEEB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|22294466|dbj|BAC08296.1| tll0745 [Thermosynechococcus elongatus BP-1]
Length = 366
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 84/263 (31%), Gaps = 42/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G+ + LQ ++ ++ L A+ + +L G I+ ++ + +
Sbjct: 54 SHMGKLVLRGEGVLGALQTLVPTNLSQLQPGQAKYTVLLNEAGGIVDDVILY-MGDGQVR 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER------- 119
++ + Y L +++ + + + V+++ + S + +R
Sbjct: 113 CIVNAATTAKDWAWFQKY-LPASIEVIDESASQVLIALQGPAATATLSPLCDRPLGEIKT 171
Query: 120 ------------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ L +T + LR+
Sbjct: 172 YRHAPVNLLGQPAWIARTGYTGEDGWEILVPAELGQQLWQTLLAAGVTPCGLGARDTLRL 231
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
++ D T P +A +D L I K ++G+ + + + I R+ +
Sbjct: 232 EAAMLLYGQDMDEQTT-PLEAGLDGL--IDWQKPDFVGRAALLAQKQQGIERQLVGLELL 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232
+ G PI +G +
Sbjct: 289 GKGIARHGYPIYAGAQAVGEVTS 311
>gi|283780905|ref|YP_003371660.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068]
gi|283439358|gb|ADB17800.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068]
Length = 815
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 60/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + +++ G A+ L + A++ T + +L +G ++ + + DTF
Sbjct: 487 SSLTRLRISGPDALALLNRLCAANIDT-EAGRIVYTPMLNQRGGCESDVIVVRDDADTFY 545
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLS--------------------WNQ 106
L ++ +D + + R++ +EI+ I+ +
Sbjct: 546 LVTSSTQAIRDVDWIERNR-RNDEQVEIEDISAATAVIGVMGPRSRELLALLSDADLQST 604
Query: 107 EHTFSNSSFID----------------------ERFSIADVLLHRTWGHNEKIASDIKTY 144
++ S ID R A L + + + Y
Sbjct: 605 HFPYNTSRTIDVGLARVRAMRMTYVGELGYELHLRADQAPQLYDELLSAGQSLGARPAGY 664
Query: 145 HE---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNII 200
+ LR+ +D P +A + I K ++G+E + + + +
Sbjct: 665 YAMNSLRLEKAYRAWGSDLSVDDT-PLEAGLGFT--IDWNKPAGFLGKEALLQQRSTG-L 720
Query: 201 RKRPMIITGTDDLPP--SGSPILTDDIEIGTLGVVV------GKKALAIAR 243
RKR + I D G I + IG AL +
Sbjct: 721 RKRLVQIVLHDSRAQLWGGERIFRGESCIGYTSSAAYGHTFGASVALGYLK 771
>gi|302539695|ref|ZP_07292037.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302457313|gb|EFL20406.1| FAD dependent oxidoreductase/aminomethyl transferase [Streptomyces
himastatinicus ATCC 53653]
Length = 808
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 91/283 (32%), Gaps = 59/283 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
++V G+ A FLQ + T +V + L G I ++++ D F
Sbjct: 496 LEVTGRGAARFLQHLTTGNVDK-SVGSVTYTLTLDHDGGIRSDVTVARLGRDHFQVGANG 554
Query: 67 -LEID-------------------------------RSKRDSLIDK------LLFYKLRS 88
L++D R L D+ L F+ R+
Sbjct: 555 NLDLDWFARHLPEDGSVQVRDITAGTCCVGLWGPKAREVLQPLADQDFSHQCLKFF--RA 612
Query: 89 N-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
I P+ + LS+ E + + D + D L + IA+ ++ L
Sbjct: 613 KRAHIGAVPVTAMRLSYVGELGWELYTTADMGAKLWD-TLWDAGREHGIIAAGRGAFNSL 671
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G D P++A + + K +IG+ + R + +R +
Sbjct: 672 RLEKGYRSFGHDMTYEHD-PYEAGVGF--AVKRDKDDFIGKAALER--RAESVTRRLTCL 726
Query: 208 TGTDDLPP--SGSPILTDDIEIGTLGVVV----GKKALAIARI 244
T D P+ D +G + K +A A +
Sbjct: 727 TIDDPASVVMGKEPVYDGDRPVGYVTSAAFGYTVGKGIAYAWL 769
>gi|271965323|ref|YP_003339519.1| sarcosine oxidase subunit alpha [Streptosporangium roseum DSM
43021]
gi|270508498|gb|ACZ86776.1| sarcosine oxidase alpha subunit [Streptosporangium roseum DSM
43021]
Length = 937
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/324 (16%), Positives = 102/324 (31%), Gaps = 67/324 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T + TLP R + P G + ++++ ED F+
Sbjct: 606 STLGKIDLQGPDAAELLDRLYTTMMGTLPVGAIRYGVMCRPDGTVFDDGTVARLAEDRFL 665
Query: 67 LEIDRSKRDSLIDK-----------LLFY-----KLRSNVIIEIQPINGVVLSWN----- 105
+++D L Y + + V + V+
Sbjct: 666 ATTTTGNAAAVLDWMEEWLQTEWPSLRVYCTSVTEQWATVALAGPGSRAVLARLAPGLAV 725
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNE-KIASDIKTY-------------------- 144
+F ++ D R + + + R E ++ +
Sbjct: 726 DRESFPFMTWRDARVAGIEARVCRISFSGELAYEINVSAWDGLALWEAVQGSGAVTPYGT 785
Query: 145 ---HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
H LR G D T+ P D +D +S K Y+G+ +R R
Sbjct: 786 ETMHVLRAEKGYPIVGQD-TDGTVTPADLGLDW--AVSRKKADYVGKRSHARPGDLRPDR 842
Query: 202 KRPMIITGTDD--LPPSGSPILTDDI----EIGTLGVV-VGKKALAIARI---------- 244
K + + D L P G+ ++ + TLG V G ++ A+ R
Sbjct: 843 KHLVGLLPDDPDRLLPEGAHLVATARLPEPPVPTLGHVTSGYRSAALGRTFALALVSGGR 902
Query: 245 DKVDHAIKKGMALTVHGVRVKASF 268
++V + + + V V +
Sbjct: 903 ERVGERLY--VPVGADQVPVTVTR 924
>gi|120404545|ref|YP_954374.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
vanbaalenii PYR-1]
gi|119957363|gb|ABM14368.1| aminomethyltransferase [Mycobacterium vanbaalenii PYR-1]
Length = 369
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 90/310 (29%), Gaps = 50/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ + T D+ + A+ + T G ++ + + +D
Sbjct: 57 SHLGKALVKGPGAAEFVNSAFTNDLRRIGPGQAQYTLCCTEDGGVIDDLIAYYVSDDEIF 116
Query: 67 LEIDRSKRDSLIDKLLFYK---------LRSNVIIEIQPI--NGVVLSWNQEHTFSNSSF 115
L + + +++ L RS ++ +Q VV +
Sbjct: 117 LVPNAANTAAVVAALQQRAPGGLTITDEHRSRAVLAVQGPVSADVVGGLGLPTDMDYMGY 176
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------------------LR 148
D F +V + RT E + + + LR
Sbjct: 177 ADAEFRGVEVRVCRTGYTGEHGYELLPPWDQAAVVFDALVEAVQSAGGEPAGLGARDTLR 236
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + I P A I K + G++ + + R+ +
Sbjct: 237 TEMGYPLHGHELSLD-ISPLQARCGW--AIGWKKDAFWGRDALLAEKAAG-PRRTLRGLR 292
Query: 209 GTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARID-KVDHAIKKGMALTVHG- 261
+ +L + +G K +A+A ID + D + + V G
Sbjct: 293 AVGRGVLRQDLTVLDGENRVGVTTSGTFSPTLKVGIALALIDTEADITDGAHVDVDVRGR 352
Query: 262 -VRVKASFPH 270
+ + P
Sbjct: 353 RIECEVVKPP 362
>gi|298208797|ref|YP_003716976.1| aminomethyltransferase [Croceibacter atlanticus HTCC2559]
gi|83848724|gb|EAP86593.1| aminomethyltransferase [Croceibacter atlanticus HTCC2559]
Length = 360
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 35/78 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + T D L A+ S + +G I+ +I + + ++
Sbjct: 49 SHMGEFLISGPNALELIQKVSTNDASKLSDGKAQYSCLTNTEGGIVDDLIIYCLNPEKYL 108
Query: 67 LEIDRSKRDSLIDKLLFY 84
L ++ S + D + +
Sbjct: 109 LVVNASNIEKDWDWISMH 126
>gi|332285408|ref|YP_004417319.1| glycine cleavage system aminomethyltransferase T [Pusillimonas sp.
T7-7]
gi|330429361|gb|AEC20695.1| glycine cleavage system aminomethyltransferase T [Pusillimonas sp.
T7-7]
Length = 364
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
I + G A FL+ ++ DV L A S +L G +L ++ D + L ++
Sbjct: 58 IDINGAGAEDFLKRLLANDVTKLSIPGKALYSCMLNLDGGVLDDLIVYFFSSDQWRLIVN 117
Query: 71 RSKRDSLIDKLL 82
+ + +
Sbjct: 118 AGTAEKDLAWIQ 129
>gi|326388776|ref|ZP_08210364.1| glycine cleavage T protein (aminomethyl transferase)
[Novosphingobium nitrogenifigens DSM 19370]
gi|326206750|gb|EGD57579.1| glycine cleavage T protein (aminomethyl transferase)
[Novosphingobium nitrogenifigens DSM 19370]
Length = 730
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 100/311 (32%), Gaps = 68/311 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A +Q +T D+ L +A+ G ++ + ++ F
Sbjct: 404 LSALRKFEVIGPDAEALMQLAVTRDITKLAVGQVVYTAMCHETGGMIDDGTVFRLGPTNF 463
Query: 66 ILEIDRS----KRDSLIDK--LLFYK---------------LRSNVI--IEIQPINGVVL 102
L +K L + L ++ + P + +
Sbjct: 464 RWVCGEDWCGVWLRELAEKNGLKVWVKSSTDQLHNLALQGPLARKILAPLVTTPAHRATV 523
Query: 103 SWNQEHTFSNSSFID-----ERFSIADVLLHRTWGHNEKIASDIKTYHEL---------- 147
+ F+ D R L + W H ++ A+ + L
Sbjct: 524 EELKWFRFTTGKLGDIPVMISRTGYTGELGYEIWCHPDQGAA---LWDALMAAGEPYGLM 580
Query: 148 ----------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRI 194
RI G+V +F T P +A + G ++ K Y+G E ++
Sbjct: 581 PFGLDGLDMVRIEAGLVFAGYEFCDQTD-PFEAGI----GFAVPKAKTAPYVGSEALA-- 633
Query: 195 QHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249
R ++ + + + G P+ +++G + K +A+AR+D
Sbjct: 634 LRREHPQRVLVGLDVAGAEAVGHGDPVFDGRLQVGVVTSATRSPVLGKTIALARVDVRKS 693
Query: 250 AIKKGMALTVH 260
A+ G AL +
Sbjct: 694 AL--GQALEIG 702
>gi|254460065|ref|ZP_05073481.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2083]
gi|206676654|gb|EDZ41141.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium HTCC2083]
Length = 813
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/319 (14%), Positives = 93/319 (29%), Gaps = 64/319 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVL----TLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A F+ V ++ + L +G I ++++
Sbjct: 488 MSSFGKIRVEGRDAEAFM-----NYVGGGDYSVANGKIVYTQFLNRRGGIEADVTVTRLT 542
Query: 62 EDTFILEIDRSKRDSLIDKLLF----YKL-----------------RSNVIIEIQPINGV 100
E ++++ + R + L +++ RS ++E N
Sbjct: 543 EQSYLVVTPAATRLADETWLRRNQGDFEVVITDVTSGEGVLAIMGPRSRELLEAVSPNDF 602
Query: 101 VLSWNQEHTFSN-----SSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------- 144
+ N T R + L + + +
Sbjct: 603 TNASNPFGTAQEIEIGMGLARAHRVTYVGELGWEIYVSADMAGHVFERLAEPGLEMGMRL 662
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
RI G D +A + + K YIG+E + Q
Sbjct: 663 CGMHMMDTCRIEKGFRHFGHDITSEDHV-MEAGLGF--AVKKDKANYIGREAILAKQENG 719
Query: 199 IIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI----DKVDH 249
+ + ++ + L P+L D + L A+ + I +K+
Sbjct: 720 LDMRLLQFKLSDPEPLLYHAEPVLRDGEIVSYLTSGAYGHHEGAAMGMGYIPCKGEKLAD 779
Query: 250 AIKKGMALTVHGVRVKASF 268
+ + V G RVKA
Sbjct: 780 VLGSTFEIDVAGTRVKAEV 798
>gi|167044745|gb|ABZ09414.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_APKG8C21]
Length = 823
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 81/273 (29%), Gaps = 50/273 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A LQ I DV +P +++L +G I +++ ED +++ +
Sbjct: 504 LQGRDAEGVLQRICANDVA-VPTGGVVYTSMLNQRGGIECDLTVTRTAEDRYLIVTSGAT 562
Query: 74 RDSLIDKLL----------------FYKL------RSNVIIE-----IQPINGVVLSWNQ 106
+ + Y + RS ++ + ++
Sbjct: 563 ERRDFEWIKSNIPNEAHAFLTNVTSAYAVLGVMGPRSRELLSQLTDVDLSSDAFPFLSSR 622
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIA-----------------SDIKTYHELRI 149
E ++ R + L + E + + LR
Sbjct: 623 EIGLGYATGRATRITYVGELGWELYIPTEFATAVYDAIIDRGAGLGLRHAGVHAMESLRS 682
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
D P +A + + + +IG++ + R + + R R +I T
Sbjct: 683 EKAYRAWGHDLTDQDT-PLEAGLGFAVALD-KETPFIGRDALLRQREAGLNR-RLVIFTL 739
Query: 210 TDDLP--PSGSPILTDDIEIGTLGVVVGKKALA 240
D P PI D + +G + L
Sbjct: 740 DDPEPLLLGDEPIYRDGVLVGRITSGAFGHTLG 772
>gi|294509140|ref|YP_003566068.1| aminomethyl transferase [Bacillus megaterium QM B1551]
gi|294352064|gb|ADE72388.1| aminomethyl transferase [Bacillus megaterium QM B1551]
Length = 360
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+F+KV G SA FLQ +IT D+ L + +L G ++ ++ +E + ++LEI
Sbjct: 51 TFLKVSGDSASSFLQELITKDLDYLTEEQTVTCLMLDEDGHLVTELIVYVMENE-YLLEI 109
Query: 70 DRSKRDSLIDKLLFYKLRSNVIIE 93
+ S + D L + ++ V+IE
Sbjct: 110 EPSLSEKAEDYLQSH-IKDGVLIE 132
>gi|91065111|gb|ABE03943.1| sarcosine dehydrogenase [Theonella swinhoei bacterial symbiont
clone pSW1H8]
Length = 823
Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 83/273 (30%), Gaps = 51/273 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + I+V G A L+ + + P +++LTP+G I I ++++D +
Sbjct: 502 STLAVIEVGGPGATGLLERVAANRIER-PIGKIVYTSLLTPKGGIAGDLTIMRLDQDRYW 560
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN--VIIEIQ-----------PINGVVLSWNQEHTFSNS 113
+ + + L + + V I P VL H SN
Sbjct: 561 VVTGGALLTRDMAWLRRHA-PDDGSVTITDHSSRYMPIGLWGPNARRVLQKATGHDVSNE 619
Query: 114 SF---------------IDERFSIADVLLHRTWGHNE-----------------KIASDI 141
+F + R S L + E IA+
Sbjct: 620 AFPYYTARSIEIGCAPVVALRISYVGELGWELYPPAEYALSVWDDLWAAGREFGMIAAGA 679
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ LR+ G D P +A + L + ++G+ + + + + R
Sbjct: 680 GAFDSLRLEKGYRLWGQDI-HQDYNPFEAGTGW--AVRLDRSEFVGRAALLKAKAGGLAR 736
Query: 202 -KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
R + + PI D IG +
Sbjct: 737 LLRCLTFDTATGMALGKEPIFDGDHCIGYVTSA 769
>gi|146277911|ref|YP_001168070.1| sarcosine oxidase alpha subunit family protein [Rhodobacter
sphaeroides ATCC 17025]
gi|145556152|gb|ABP70765.1| sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides
ATCC 17025]
Length = 993
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 80/282 (28%), Gaps = 60/282 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP R + G ++ ++++I ED+++
Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVARISEDSWL 719
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95
D + + + + V I ++
Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVHTANLTEQFAQVAIVGPNARRLLEKLGGMDVS 779
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLL-----------------HRTWGHNEKIA 138
+ W E T + R S + L H +
Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACHEAGAEFGAMP 838
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K +IG+ + R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVIPQDLNLGW--AISKKKADFIGKRGMERAFLAS 895
Query: 199 IIRKRPMIITGTDD--------LPPSGSPILTDDIEIGTLGV 232
R + + + D P GS G +
Sbjct: 896 PDRWKLVGLETLDGSVLPDGAIAPAPGSNANGQRNTQGRVTS 937
>gi|326559384|gb|EGE09809.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis 46P47B1]
gi|326568515|gb|EGE18587.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis BC1]
gi|326575570|gb|EGE25494.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis O35E]
Length = 366
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 95/289 (32%), Gaps = 61/289 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118
+ + + + R+ + V + + P + V L+ + + +
Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLAVKP 165
Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141
+ V L W +
Sbjct: 166 EWTDKVNALKPFVGVDLGDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D + P +A M + +IG+ + +++ +
Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKDENRDFIGKSALIALKNDGVKM 284
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIARI 244
++ ++ + +G ++T+D G G +++AIAR+
Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIARV 330
>gi|300742070|ref|ZP_07072091.1| glycine cleavage system T protein [Rothia dentocariosa M567]
gi|300381255|gb|EFJ77817.1| glycine cleavage system T protein [Rothia dentocariosa M567]
Length = 372
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 97/291 (33%), Gaps = 64/291 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++ G A FL A+++ + L A+ S + +G ++ + ++ ++
Sbjct: 50 LSHMGEFRITGPDAAAFLDYALVSN-MSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108
Query: 65 FILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---EHTFSNSSFID 117
F++ + + D ++ ++L + +V + + +++ E + D
Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF----DVKFVNESDDTSLIAVQGPRAEEILLAAGASD 164
Query: 118 ER--------------FSIADVLLHRTWGHNE-------KIASDIKTYHE---------- 146
E + DVLL RT E A+ +K +
Sbjct: 165 EDAVRELKYYASVPVTIAGVDVLLARTGYTGEDGFELFVPNANAVKLWEALAAAGEPFGL 224
Query: 147 ----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
LR+ G+ + I P ++ + L I+L K + V R
Sbjct: 225 TPAGLAARDSLRLEAGMPLYGHELGLD-ITPFESGLGRLVEIALEKKTV---DFVGRTAL 280
Query: 197 RNIIR----KRPMIITGTDDLPPSGSP--ILTDDIEIGTLGVVVGKKALAI 241
+ + + + + P + + +IG + + L
Sbjct: 281 TELAKSPSERILVGLKAQAKRPARAGSFLVDAEGNQIGEVTSGIPSPTLGY 331
>gi|255264879|ref|ZP_05344221.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62]
gi|255107214|gb|EET49888.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62]
Length = 1003
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 100/323 (30%), Gaps = 65/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL R + + G + ++++I+EDTF+
Sbjct: 670 STLGKIIVKGPDAGKFLDMMYTNMMSTLKVGRCRYGLMCSENGFLSDDGVVARIDEDTFL 729
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR--------SNVII---------------EIQ 95
D + + +K+ + V + ++
Sbjct: 730 CHTTTGGADRIHAHMEEWLQTEWWDWKVWTVNATEQYAQVAVVGPKARKVLQKLGGMDVS 789
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IA 138
++W S+ + R S + L + + +
Sbjct: 790 REALSFMAWADGEIGGFSARVY-RISFSGELSYEIAVKASEGRAFWDALLEAGEEFGVMP 848
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K ++G+ R +
Sbjct: 849 YGTEALHIMRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKDDFLGKRAQQRSHMTD 905
Query: 199 IIRKRPMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVGK----KALAIARIDK 246
R + + + T + P G+ +T+ IG + + +A+ +
Sbjct: 906 PDRWQLVGLETVDGSVLPDGAYAVTEGENANGQRNMIGRVTSTYHSPTLERGIAMGLVKH 965
Query: 247 VDHAIKKGMAL-TVHGVRVKASF 268
+ + + + G V A
Sbjct: 966 GPDRMGERLEFPKIDGTSVFAKI 988
>gi|150396403|ref|YP_001326870.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
medicae WSM419]
gi|150027918|gb|ABR60035.1| glycine cleavage system T protein [Sinorhizobium medicae WSM419]
Length = 379
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 87/302 (28%), Gaps = 55/302 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L+ ++ DVL+L R G IL +I D L ++ + +D+
Sbjct: 71 EDAALALEKLVPVDVLSLAEGRQRYGLFTNATGGILDDLMIVNRG-DHLFLVVNAACKDA 129
Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113
L L +I +Q P G VL W E +
Sbjct: 130 DFAHLKNGLGSLCDVTM--LTDRALIALQGPRAGAVLCELWADVASMRFMDVAEADLHDV 187
Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
S I R R H + + + LR+ G+ D
Sbjct: 188 SCIISRSGYTGEDGFEISIPTEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247
Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
ST P +A ++ G + G + + + R+R +
Sbjct: 248 IDTSTS-PIEAGLEWAIQKSRRADGERAGGFPGADRILAEFTHGVSRRRVGLKPEGRAPV 306
Query: 215 PSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
G + D + GT+ V G A+ + + + + + V
Sbjct: 307 RGGVRLFADAEGNTAAGTVTSGGFGPSVDGPIAMGYVDAEHAETGTRLFAEVRGKFLPVA 366
Query: 266 AS 267
S
Sbjct: 367 VS 368
>gi|307326478|ref|ZP_07605673.1| glycine cleavage system T protein [Streptomyces violaceusniger Tu
4113]
gi|306887886|gb|EFN18877.1| glycine cleavage system T protein [Streptomyces violaceusniger Tu
4113]
Length = 375
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 64/314 (20%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G A L A++ + L AR + + +G IL ++ ++ ++
Sbjct: 55 LSHMGEISLIGSQAGEALDHALVGR-LSALAVGRARYTMVCDDEGGILDDLIVYRLGDEE 113
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVII-EIQPINGVVLSWNQEHTFSNSSFIDERF 120
F++ + S ++D L R+ + + + ++ E S D
Sbjct: 114 FLVVANASNAQVVLDALTE---RAGGFEATVRDDRDAYALIAVQGPESPGILGSLTDADL 170
Query: 121 -------------SIADVLLHRTWGHNEK-----IASDIKT--YHE-------------- 146
+ ++ RT E +A D +
Sbjct: 171 EGLKYYAGLPGTVAGVPAMIARTGYTGEDGFELFLAPDDAERVWDALTEAGAPVGLVPCG 230
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQ---EVVSRIQH 196
LR+ G+ + T P DA + + + K G ++G+ E SR
Sbjct: 231 LSCRDTLRLEAGMPLYGNELTTDTT-PFDAGLGRV--VKFDKPGDFVGRQALEAASREAD 287
Query: 197 RNIIRKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KALAIARIDKVDH 249
R ++ +P +G + + D +IG + A+A +
Sbjct: 288 TVSPRTLVGLVAEGRRVPRAGYAVVAADGSQIGQVTSGAPSPTLGRPIAMAYVDPEYAKP 347
Query: 250 AIKKGMALTVHGVR 263
+G+++ + G R
Sbjct: 348 G-TEGVSVDIRGTR 360
>gi|319442015|ref|ZP_07991171.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
variabile DSM 44702]
Length = 397
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A FL A+I+ + + A+ S I G I+ + + +
Sbjct: 49 LSHMGEVRVTGPDAAAFLDHALISR-ISAVKVGKAKYSMICREDGGIIDDLITYVLAPEE 107
Query: 65 FILEIDRSKRDSLIDKLL 82
+++ + ++ L
Sbjct: 108 YLVVPNAGNAPAVFAALT 125
>gi|307945169|ref|ZP_07660505.1| sarcosine oxidase subunit alpha [Roseibium sp. TrichSKD4]
gi|307771042|gb|EFO30267.1| sarcosine oxidase subunit alpha [Roseibium sp. TrichSKD4]
Length = 983
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 23/212 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I V G A FL + + LP AR +L G ++ ++ E
Sbjct: 646 CDVSSLGKIAVQGPDAAEFLNRVYSNGFAKLPIGKARYGIMLRDDGFVMDDGTTWRLGET 705
Query: 64 TFIL---EIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSF-- 115
F++ + K +++LL + R V + +S + +
Sbjct: 706 EFLMTTTTTNAGKVMVFMEELL--QTRWPDLKVHVSSVSDEWAAVSVAGPKARATIAACL 763
Query: 116 ------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
+E V + + I EL + + + ++P
Sbjct: 764 AEGEYISNEALPFMGVRKITLANGIPGLIARISFSGELAYELYVPAGHGAAMMDLLWPEA 823
Query: 170 -------ALMDLLNGISLTKGCYIGQEVVSRI 194
++ L + + KG G E+ R+
Sbjct: 824 ERQGGCLYGLEALGTLRIEKGHVTGAELDGRV 855
>gi|153824035|ref|ZP_01976702.1| glycine cleavage system T protein [Vibrio cholerae B33]
gi|126518444|gb|EAZ75667.1| glycine cleavage system T protein [Vibrio cholerae B33]
Length = 368
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 44/249 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 72 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 129
Query: 90 VIIEIQPINGVVLSWNQEHT----------------------FSNSSFIDERFSIADVLL 127
V +E+ ++ + + I R
Sbjct: 130 VEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAECIVSRSGYTGEDG 189
Query: 128 HRTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMD 173
+ +K A+ + LR+ G+ D P+T +L+
Sbjct: 190 YEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLCLYGHDLDPTTTPVEASLLW 249
Query: 174 LLNGI----SLTKGCYIGQEVV-SRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEI 227
+ + +G + G E++ S+I+ + + RKR +I T G+ + +I
Sbjct: 250 AIQPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 309
Query: 228 GTLGVVVGK 236
G +
Sbjct: 310 GIVTSGTAG 318
>gi|119504941|ref|ZP_01627018.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2080]
gi|119459227|gb|EAW40325.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2080]
Length = 366
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 100/290 (34%), Gaps = 57/290 (19%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85
++ D+ LP S + T G +L +I++ +ED ++L ++ S+RD+ ++ L +
Sbjct: 71 LLPTDIRALPIGRQCYSLLTTESGGVLDDLMIARRQED-YLLVVNASRRDADLEHLGRH- 128
Query: 86 LRSNVIIEIQPI-------------------------NGVVLSWNQEHTF-SNSSFIDER 119
++ V I+ + + + V+ W + S S + E
Sbjct: 129 IKDVVTIDDRALLALQGPCAEAVLMPLIPDVTHMRFMDVAVVYWQAHEIWISRSGYTGED 188
Query: 120 -------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
S A+ H + + + LR+ G+ + I P +A +
Sbjct: 189 GFEISILVSAAEDFTHALLENEDVALCGLGARDSLRMEAGMPLYGHEL-KEDISPIEAGL 247
Query: 173 DLLNGISLTK-------GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT--- 222
I ++ G ++G + + R R+R + G +
Sbjct: 248 SW--AIHRSRRATGKFPGEFLGADRILRELDHGAARRRIGLKPQGRAPMRDGVLLYDSPE 305
Query: 223 DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
IG + A+A+ + + A G V G R++A
Sbjct: 306 GSEPIGVITSGGFSPSLRAPIAMALIKSEVDSRATVFGE---VRGRRLEA 352
>gi|323507968|emb|CBQ67839.1| probable GCV1-glycine decarboxylase, subunit T, mitochondrial
[Sporisorium reilianum]
Length = 453
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 101/299 (33%), Gaps = 61/299 (20%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+ FLQ + A + ++P + S +L+ QG IL +I+K +D+F + + R
Sbjct: 139 GPGALKFLQHLTPASLTSMPAFSSTLSVLLSEQGGILDDLIITKHADDSFYVVTNAGCRT 198
Query: 76 SLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEH----------------TFSNSSF 115
+ +L + V ++ G++ TF S+F
Sbjct: 199 DDLAWFKK-QLDAWTGDAVEHKVMDDWGLLALQGPTAAKVLEKLAGDFDLNQLTFGKSAF 257
Query: 116 ID------------ERFSIAD--------------VLLHRTWGHNEKIASDIKTYHELRI 149
+ R L +E + + LR+
Sbjct: 258 VPLSVNGDKVECHVARAGYTGEDGFEISIPPASTVALAETLLADSEVQLAGLAARDSLRL 317
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
G+ D +T+ P + + + G ++G E V + R+R ++
Sbjct: 318 EAGMCLYGHDL-DATVSPIEGALAWVVGKDRRAAADFLGAERVLKELKEGPPRRRVGLLI 376
Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ G+ + T + E +G + + A+A+ + + KKG L V
Sbjct: 377 -DGGIAREGANLFTPEGELVGRVTSGIPSPTLGKNIAMALVQ----NGQHKKGTKLKVE 430
>gi|326559763|gb|EGE10173.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis 7169]
Length = 366
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 94/288 (32%), Gaps = 61/288 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDES 111
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNV----IIEIQPINGVV-LSWNQEHTFSNSSFIDE 118
+ + + + R+ + V + + P + V L+ + + +
Sbjct: 112 AYRIISNGATREKDSAH------FAKVGGAFGVTLTPRHDVAMLAIQGPNAITKLLTVKP 165
Query: 119 RF--------SIADVLLHRTW-----------------------------GHNEKIASDI 141
+ V L W +
Sbjct: 166 EWTDKVNALKPFVGVDLSDDWFVAYTGYTGEDGVEVVMPADEATGFFDELIKAGVAPCGL 225
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ D + P +A M + ++G+ + +++ +
Sbjct: 226 GARDTLRMEAGMNLYGNDMT-DDVSPLEAGMAWTVDLKNENRDFVGKSALIALKNDGVKM 284
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIAR 243
++ ++ + +G ++T+D G G +++AIAR
Sbjct: 285 RQVGLLLAKGGVLRAGMEVITED---GFGITTSGVFSPTLNQSIAIAR 329
>gi|170596929|ref|XP_001902948.1| pyruvate dehydrogenase phosphatase regulatory subunit precursor
[Brugia malayi]
gi|158589053|gb|EDP28205.1| pyruvate dehydrogenase phosphatase regulatory subunit precursor,
putative [Brugia malayi]
Length = 844
Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 56/287 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS+ + + G + + FLQ + + +V +P + + QG + I ++EED
Sbjct: 497 IDLSSFAKFNIEGPNVVEFLQYLCSGNVN-VPVGSIVYTGMQNEQGGFVSDCAICRLEED 555
Query: 64 TFILEIDRSKRDSLIDKLLFY--KLRSNVII-EIQPINGVVLSWNQEH------------ 108
F + ++ L + KL + + ++ V+
Sbjct: 556 QFFAIVPPVQQLRFCLWLKKWVKKLGHKIYVGDVTGHYTVLDVVGPSSRALMEKLTGESM 615
Query: 109 ---TFSNSSFIDERFSIADVLLHRTWGHN------------------EKIASDIKTY--- 144
F + S + +A + + H E++ K Y
Sbjct: 616 SRCDFPSFSIREIAIGMATGIRALSLTHTGELEWEMYIPNEVVQNVYERLMERGKEYGVM 675
Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+LRI V D + P + + K +IG++ + +
Sbjct: 676 HAGYYALRQLRIEKFFVCWGQDISTD-VTPLECG--RTYRVDFHKN-FIGKDALLEQKRN 731
Query: 198 NIIRKRPMIITGTDDL-----PPSGSPILTDDIEIGTLGVVVGKKAL 239
I ++ ++ G DL P G I +G L
Sbjct: 732 GIRKRFVQLLVGNHDLDHDPWPQGGELIYRYGEPVGRTTSAAYGYTL 778
>gi|251791007|ref|YP_003005728.1| glycine cleavage system aminomethyltransferase T [Dickeya zeae
Ech1591]
gi|247539628|gb|ACT08249.1| glycine cleavage system T protein [Dickeya zeae Ech1591]
Length = 366
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F
Sbjct: 50 SHMTIVDLRGARVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH 108
L ++ + R+ + + + + V I + ++ +
Sbjct: 110 RLVVNSATREKDLAWITEH---AKPFMVAITEREDLSLIAVQGPQA 152
>gi|3915699|sp|P49364|GCST_PEA RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438217|emb|CAA81080.1| T-protein [Pisum sativum]
gi|3021553|emb|CAA10976.1| T protein [Pisum sativum]
Length = 408
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK + FL+ ++ ADV L + + +G + +I+K+
Sbjct: 80 SLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVT 139
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
+D L ++ ++ L
Sbjct: 140 DDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199
Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + + ING + E F S + +A LL ++ G
Sbjct: 200 KEDL-SKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKI 258
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G +V+ +
Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDLE-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 315
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232
+R I+ + P S S I IG +
Sbjct: 316 QLADGPSIRRVGFIS-SGPPPRSHSEIQDEGGNNIGEVTS 354
>gi|186477749|ref|YP_001859219.1| glycine cleavage system aminomethyltransferase T [Burkholderia
phymatum STM815]
gi|238691314|sp|B2JJ71|GCST_BURP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|184194208|gb|ACC72173.1| glycine cleavage system T protein [Burkholderia phymatum STM815]
Length = 372
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + I + G L+ ++ + A
Sbjct: 112 RVVVNAGTAEKDIAWFNK----------LNDEEGFGLTITPRRDYAIVAVQGPN---ARE 158
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ T H + +K ++ R+
Sbjct: 159 KVWATVPHARAASEALKPFNAARVA 183
>gi|323697862|ref|ZP_08109774.1| glycine cleavage system T protein [Desulfovibrio sp. ND132]
gi|323457794|gb|EGB13659.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
ND132]
Length = 361
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 91/302 (30%), Gaps = 55/302 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ GK A L I++ D+ TL R +L G I ++ + ED ++L ++ +
Sbjct: 58 KLSGKGAKDALNTIVSHDLNTLAPGKCRYGFLLNASGGINDDLIVYCLAEDEYMLVVNGA 117
Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH----------------------- 108
R D + L S ++ +I G + E
Sbjct: 118 CRQKDFDHIAA-NLPSGLVFTDISDETGKIDVQGPESLEVVNALLGCKWNHLKYFNFEQT 176
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHN-------EKIASD-------IKTYHELRINHGIV 154
I R L + + + EK+ +D + LR+ G
Sbjct: 177 DVLGFPMIVSRTGYTGELGYELYLPSDKALDVWEKLMADERVEPVGLGARDTLRLEIGYP 236
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P +A +G L K YIG+ + R+ I P+ I G
Sbjct: 237 LYGQDLDEQRT-PVEAG----SGFFLKKESEYIGKSGLGRVDECLI----PLTIDGRRTA 287
Query: 214 PPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ L + G + ALA R D+ K S
Sbjct: 288 RHNDEVCLPGGEKTGVVTSGSFAPSLGHCVALAYVRAKDADNETFIIKTARAELEAKKTS 347
Query: 268 FP 269
P
Sbjct: 348 LP 349
>gi|254503741|ref|ZP_05115892.1| sarcosine oxidase, alpha subunit family [Labrenzia alexandrii
DFL-11]
gi|222439812|gb|EEE46491.1| sarcosine oxidase, alpha subunit family [Labrenzia alexandrii
DFL-11]
Length = 1000
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 58/325 (17%), Positives = 94/325 (28%), Gaps = 65/325 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL+ I T L R +L G I+ +I ++ +D F
Sbjct: 667 STLGKIEVVGPDAAEFLERIYTNPWKKLAPGRCRYGLLLNDAGFIVDDGVIGRLADDRFH 726
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----PINGVVLSWNQEHTFSNSSFIDERFS 121
+ S+ + Y +++ V + + FI+
Sbjct: 727 VTTTTGGAPSVFATMEDYLQTEWPDLDVWITSTTEQYAVAAVQGPKAREVIAPFIEGIDL 786
Query: 122 IADVLLH----------------------------------------RTWGHNEK---IA 138
AD H G EK A
Sbjct: 787 SADAFPHMSVKEGTFCGVPCRLFRISFTGELGFEINVPRRHGKMMWETLAGEIEKHNGTA 846
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P DA M I K ++G+ + R
Sbjct: 847 YGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSW--AIGKKKHDFVGKRGLERPDLVA 903
Query: 199 IIRKRPMIITGTDDLP--PSGSPILTDDIEI------GTLGVVV------GKKALAIARI 244
RK+ + + D G+ I + G + ALAI +
Sbjct: 904 ENRKQFVGLLTKDPKVKLEEGAQITVEQNPATGTPAEGHVTSSYYSPAMGRTIALAIVKN 963
Query: 245 DKVDHAIKKGMALTVHGVRVKASFP 269
H + + G+ V+ + P
Sbjct: 964 GHALHGKSLYVPMPDGGIEVEVTSP 988
>gi|16127585|ref|NP_422149.1| glycine cleavage system T protein [Caulobacter crescentus CB15]
gi|221236401|ref|YP_002518838.1| aminomethyltransferase [Caulobacter crescentus NA1000]
gi|13425059|gb|AAK25317.1| glycine cleavage system T protein [Caulobacter crescentus CB15]
gi|220965574|gb|ACL96930.1| aminomethyltransferase [Caulobacter crescentus NA1000]
Length = 375
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 91/264 (34%), Gaps = 40/264 (15%)
Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ ++ G++ A F + +++AD L R +L G I+ + ++ +ED
Sbjct: 60 SHMGQARIRGENPAKSF-EKVVSADYQGLKAGKQRYGVLLNADGGIVDDLMTARPDEDGL 118
Query: 66 ILEIDRSKRD--------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ ++ + +D L + +L ++ +Q + + F+D
Sbjct: 119 FVVVNGACKDNDYAIIARELAGEATVTRLEDRALLALQGPEAAAVLAAHVPEAAQMVFMD 178
Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIAS-DIKTYHELRIN 150
+ + A + T +E++ + LR+
Sbjct: 179 AKALSAFGVDAIISRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSLRLE 238
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P +A ++ G S + G Y+G +++ + R R +
Sbjct: 239 AGLPLYGHDL-DETVSPIEAGLNFAVGRSRREAGDYLGAARIAKELAGELSRVRVNLKVL 297
Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232
G+ I + IG +
Sbjct: 298 EGAPAREGAEIADEAGNVIGKVTS 321
>gi|99080275|ref|YP_612429.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040]
gi|99036555|gb|ABF63167.1| FAD dependent oxidoreductase [Ruegeria sp. TM1040]
Length = 819
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 60/310 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI---- 69
V G+ A L I D+ +P +A G +++++ D F++ +
Sbjct: 498 VQGRDACTLLNRISCNDID-VPIGKVVYTAWTNQAGGFEADLTVTRMDVDRFMVVVGENS 556
Query: 70 ---------DRSKRDSL---------IDKLLFY--KLR---SNVIIEIQPINGVVLSWNQ 106
D I ++ + K R + V Q
Sbjct: 557 HGHTETWMRRHIGADEFVTITDMTDGITQINLHGPKARDILAKVSAADLSQEAFPFMTAQ 616
Query: 107 EHTFSNSSFIDERFSIADVLLH-----------------RTWGHNEKIASDIKTYHELRI 149
R + L + + + ++T LR+
Sbjct: 617 HIDVGLFRIHALRVTYVGELGWELHVPSLHAVQVYDLLMQAGADHGLRNAGMQTLSSLRL 676
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP--MI 206
D D +T P +A + + L K G +IG++ +++I+ ++R +
Sbjct: 677 EKAYRDFGVDL-DNTDTPIEAGLGF--AVKLDKPGGFIGRDALAKIKAAGAPKRRMLQFL 733
Query: 207 ITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARID---KVDHAIKKGMAL 257
+ + L I DD +G + + G + A I+ + A ++
Sbjct: 734 LRDPEPLLHGNEIIYLDDKPVGYIQVGAYGHTLQGAVGIGFAEIETPLTSEIATSGAWSI 793
Query: 258 TVHGVRVKAS 267
+ G ++ A+
Sbjct: 794 DIAGTKIAAT 803
>gi|300770688|ref|ZP_07080567.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861]
gi|300763164|gb|EFK59981.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861]
Length = 360
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 92/305 (30%), Gaps = 52/305 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G + + LQ + + DV L + + + G ++ FL +I+E T+ L ++ S
Sbjct: 57 LKGDNVLDLLQKVSSNDVSKLYDGKVQYAYLPNENGGVVDDFLTYRIDEKTYFLVVNASN 116
Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ + + Y L + +Q + + L+ + +TF+ +F
Sbjct: 117 IEKDWNWISKYNTYGVEMKNISDQTSLFAVQGPKAAEALQSLTDIELAPMEYYTFAKGTF 176
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152
+ + G E ++ + LR+ G
Sbjct: 177 AGVDNVLVSATGYTGAGGFEIYVANEDAQKVWDAIFEAGAAYGIKPIGLGARDTLRLEMG 236
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D +T P A + + TK ++ + + + +K
Sbjct: 237 FCLYGNDIDDNTS-PLAAGLGWV--TKFTKD-FVNSANLKAEKEAGVKQKLVGFEMIDRG 292
Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P I+ D IG + L + + + ++ K
Sbjct: 293 IPRHDYEIVDADGNVIGRVTSGTQSPSLKKSIGLGYVDQAFAKEGTEIFIHIRNQKIKAK 352
Query: 266 ASFPH 270
+ P
Sbjct: 353 VAKPP 357
>gi|257055375|ref|YP_003133207.1| glycine cleavage system aminomethyltransferase T [Saccharomonospora
viridis DSM 43017]
gi|256585247|gb|ACU96380.1| aminomethyltransferase [Saccharomonospora viridis DSM 43017]
Length = 370
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/320 (14%), Positives = 101/320 (31%), Gaps = 68/320 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAI---ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
LS+ I+V G A QA+ + ++ L AR + + G +L ++ ++ E
Sbjct: 53 LSHMGEIEVTGAEAA---QALDYALVGNLSALKVGRARYTLLCAADGGVLDDLVVYRLSE 109
Query: 63 DTFILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+++ + ++L ++ + + V ++ P ++
Sbjct: 110 RRYLVVANAGNTAVVVEALRERAATFD--AEVT-DVSPQTALIAVQGPASAAIVEQVTGA 166
Query: 119 RFSI-------------ADVLLHRTWGHNE-------KIASDIKTY-------------- 144
A++LL RT E S + +
Sbjct: 167 ELDSLRYFASMPATVDGAEILLARTGYTGEDGFELFLDADSAVSVWRRITEAGASHGLLP 226
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR 197
LR+ G+ + S + P A + + K G ++G+ S ++ +
Sbjct: 227 AGLACRDTLRLEAGMPLYGNEL-SSELTPFHAGLGRT--VKFDKPGDFVGR---SALEDK 280
Query: 198 NIIRKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVV------GKKALAIARIDKVDHA 250
K + + G P S +L D +G + V A+A + +
Sbjct: 281 REPEKVLVGLRGEGRRAPRHSYRVLDGDRVVGEITSGVLSPTLGYPIAMAYVTPEVAEPG 340
Query: 251 IKKGMALTVHGVRVK-ASFP 269
+ + V+ S P
Sbjct: 341 TALLVDIRGRSTPVEVVSLP 360
>gi|260430236|ref|ZP_05784210.1| glycine cleavage T-protein [Citreicella sp. SE45]
gi|260418708|gb|EEX11964.1| glycine cleavage T-protein [Citreicella sp. SE45]
Length = 788
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A L ++T +V TL SA+ P G ++ + ++ E F
Sbjct: 458 LSALRKFEVTGPDAEALLNWVLTRNVETLGIGQVVYSAMCYPHGGMIDDGTLFRLGEHNF 517
>gi|312890318|ref|ZP_07749855.1| glycine cleavage system T protein [Mucilaginibacter paludis DSM
18603]
gi|311297088|gb|EFQ74220.1| glycine cleavage system T protein [Mucilaginibacter paludis DSM
18603]
Length = 359
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 52/308 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A+ +Q + + D L + S + G I+ L+ +++ T++L ++ S
Sbjct: 56 LKGDHALDLIQKVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRVDAKTYMLVVNASN 115
Query: 74 RDSLIDKLLFYKLRS------------------NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ D + Y +Q + + L+ + +TFS F
Sbjct: 116 IEKDWDWISKYNTFGVDMKNISDRTSLLAIQGPKAAEALQSLTDLDLASMEYYTFSKGKF 175
Query: 116 IDERFSIADVLLHRTWGHNEKIASD---IKTY--------------------HELRINHG 152
+ + G E + + + LR+ G
Sbjct: 176 AGVDNVLVSATGYTGAGGFEVYFDNEYAEEIWKAIFKAGEPFGIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + K + + + + R+ I
Sbjct: 236 FCLYGNDI-DDTTSPLEAGLGWV--TKFNKE-FTNSAALQAQKQAGVSRRLVGIEMIDRG 291
Query: 213 LPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P I D IG + + + + + + + ++ K
Sbjct: 292 IPRHDYEITDADGNTIGKVTSGTQSPSLQKPIGMGYVNTEFAKEGTEIYIKIRDNQIKAK 351
Query: 266 ASFPHWYK 273
+ P +YK
Sbjct: 352 VAKPPFYK 359
>gi|260433283|ref|ZP_05787254.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417111|gb|EEX10370.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis
ITI-1157]
Length = 1004
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 84/273 (30%), Gaps = 57/273 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 678 VKGPDAGKFLDMMYTNMMSTLKVGKCRYGLMCSENGFLIDDGVVARIDEDTWLCHTTTGG 737
Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110
+ + + Y +NV E VV ++
Sbjct: 738 AERIHAHMEEWLQCEWWDWKVYV--ANVT-EQYAQVAVVGPNARKVLEKLGGMDVSREAL 794
Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---KIASDIKT----YHE----------------- 146
+ D R D +R E +IA +
Sbjct: 795 PFMEWRDGRIGGFDCRAYRISFSGELSYEIAVPASQGQAFWDALMEAGKEFGVMPYGTEC 854
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G + + T+ P D + IS K ++G+ R + R +
Sbjct: 855 LHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--AISKKKEDFLGKRAQERSHMTDPDRWK 911
Query: 204 PMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG 235
+ + T + P G+ + + + V+G
Sbjct: 912 LVGLETVDGSVLPDGAYAVGEGVNANGQRNVIG 944
>gi|163734282|ref|ZP_02141722.1| FAD dependent oxidoreductase, putative [Roseobacter litoralis Och
149]
gi|161392290|gb|EDQ16619.1| FAD dependent oxidoreductase, putative [Roseobacter litoralis Och
149]
Length = 720
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 55/239 (23%)
Query: 6 LSNQSFIKVCGKSAIPFLQ----AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+S+ I+V G+ A+ F+ DV P + L QG I ++++
Sbjct: 489 MSSFGKIRVEGRDAVAFMNHVGGGQY--DV---PVGKIVYTQFLNHQGGIEADVTVTRLS 543
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVL------------------ 102
E F++ + R + ++ ++ NV+I ++ GV+
Sbjct: 544 ETAFLVVTPAATRLADQTWMMRHRGDFNVVITDVTAGEGVLAIMGPNARKLLQQVSPADF 603
Query: 103 -------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------- 146
QE R + L + ++ A + HE
Sbjct: 604 SNEVNPFGTAQEIELGMGLARVHRVTYVGELGWEVYVSSDMAAHAFEVLHEAGQDLGVKL 663
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
R+ G D +A + + K +IG++ V R +HR
Sbjct: 664 CGMHMMDCARMEKGFRHFGHDITCEDHV-LEAGLGF--AVKTDKPDFIGRDAVLRRRHR 719
>gi|83646575|ref|YP_435010.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396]
gi|83634618|gb|ABC30585.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396]
Length = 376
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 79/323 (24%)
Query: 7 SNQSFIKVC-------------GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL 53
S+ +++ G D++ L R + +G IL
Sbjct: 59 SHMGQVRLKGAGAAEALEALVPG-------------DIVGLENGAQRYTLFTNDKGGILD 105
Query: 54 YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPIN--------------- 98
+++ ED F++ ++ + ++ I L + L V IE+
Sbjct: 106 DLMVTNTGEDLFLV-VNAACKEQDIAHLRKH-LGDKVEIEVLEDRALLALQGPAAAGVME 163
Query: 99 -------------GVVLSWNQEHTF-SNSSFIDE-------RFSIADVLLHRTWGHNEKI 137
G + + F + S + E A+ L + H +
Sbjct: 164 QLAPELTKLVFMTGAWATLDGAECFVTRSGYTGEDGYEISVPADRAEALARKLLAHPDVE 223
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL-----NGISLTKGCYIGQEVVS 192
A + LR+ G+ D T A + + G + G +V
Sbjct: 224 AIGLGARDSLRLEAGLCLYGHDLDTDTNL-VAANLKWVLSKPRRADGERAGGFPGADVTL 282
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKA------LAIARID 245
RKR + G I+ +G + G +A+ ++
Sbjct: 283 SEFAEGSPRKRVGLAPQGRAPVREGVEIVNGEGKVVGVVTS--GGYGPSVEKPVAMGYVN 340
Query: 246 KVDHAIKKGMALTVHGVRVKASF 268
A+ + V G V +
Sbjct: 341 ADCSAMGTELKAIVRGKEVPVTV 363
>gi|58039556|ref|YP_191520.1| aminomethyltransferase (glycine cleavage system T protein)
[Gluconobacter oxydans 621H]
gi|58001970|gb|AAW60864.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Gluconobacter oxydans 621H]
Length = 383
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 101/315 (32%), Gaps = 58/315 (18%)
Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G A L+ ++ AD + L R + +G IL +++ +
Sbjct: 60 SHMGQIRIAAKSGDVKDAAAALETLVPADFVGLAAGRQRYGLLTNEKGGILDDLMVANMG 119
Query: 62 EDTFILE------IDRSKRD-SLIDKLLFYKLRSNVIIEIQ------------------- 95
+D ++ D + + +L D+ + + ++ +Q
Sbjct: 120 KDLLVVVNAGCKVQDADRIEKALSDRCVVTRQFDRALMALQGPAAEAALAPLCPAVKDMR 179
Query: 96 -------PINGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHEL 147
+ GV ++ ++ F I + A+ + + + + L
Sbjct: 180 FMDVIETELAGVPVTVSRSGYTGEDGFEIGCAGADAEKVARAILAQPDVLPIGLGARDSL 239
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNII 200
R+ G+ D T P +A + G+ +G Y G +VV + +
Sbjct: 240 RLEAGLCLYGNDIDV-TTTPVEASLGWAIQKARREGGV--REGGYPGADVVLKQTRDGVA 296
Query: 201 RKRPMIITGTDDLPPSGSPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAI 251
RKR ++ +G+ + D EIG + V A+ +
Sbjct: 297 RKRVGLVADGRAPVRAGAKLFADAEGQKEIGVVTSGAFGPSVKAPVAMGYVTPEYAAVDT 356
Query: 252 KKGMALTVHGVRVKA 266
L V +
Sbjct: 357 PVFAELRGKYVPLHV 371
>gi|83954245|ref|ZP_00962965.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
gi|83841282|gb|EAP80452.1| aminomethyl transferase family protein [Sulfitobacter sp. NAS-14.1]
Length = 371
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 60/311 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + T D+ R + +G+++ ++ + +D + L I
Sbjct: 65 VELSGPDAARLIQYLTTRDMSKTRIGQGRYVPMCDHRGRLINDPVLLMLAQDRYWLSIAD 124
Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92
S K +++I L L Y +
Sbjct: 125 SDIALWASAIAAERGWDVTVAEPDVSPLAVQGPKAEAVITALFGDWVRDLRYFGFKQTQL 184
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIKTYHELRI 149
P+ W+++ F R ++ +G +D++ RI
Sbjct: 185 GDIPLVLARSGWSKQGGFEMYLQDSSRGGELWAMVKAAGAPFGIRPGAPNDVE-----RI 239
Query: 150 NHGIVDPNTD--FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
G+V D + P+D + L + + +IG+E + RI R+R +
Sbjct: 240 ESGLVSYGADGRLQTNPSTPYDIGLGKLVDLETPED-FIGKEALRRIADEGAQRERSGFV 298
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVG---------KKALAIARIDKVDHAIKKGMALT 258
L +G I D + GV+ + + D ++ +
Sbjct: 299 IAGAPLTAAGHSIPVLDDKGQPRGVLSDYVYSKRFKANIGVGMIASDAKQASLHVVIGDE 358
Query: 259 VHGVRVKASFP 269
V ++ S P
Sbjct: 359 ARNVTLR-SLP 368
>gi|156538178|ref|XP_001601025.1| PREDICTED: similar to Aminomethyltransferase [Nasonia vitripennis]
Length = 413
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G+ + FL+++ TAD+ +L A + QG IL +I+K +D F + +
Sbjct: 95 HVTGRDSGEFLESLTTADLQSLKQGSAGLTVFTNDQGGILDDLIITKDRDDKFFVVSNAG 154
Query: 73 KR 74
+R
Sbjct: 155 RR 156
>gi|326572418|gb|EGE22410.1| glycine cleavage system aminomethyltransferase T [Moraxella
catarrhalis BC8]
Length = 366
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G +A FLQ ++ DV L + A SA+L G ++ ++ ++ ED
Sbjct: 52 SHMLVTDINGDNAKAFLQKLLANDVAKLGFVGKALYSAMLNDDGGVIDDLIVYRMNEDE 110
>gi|328722670|ref|XP_003247633.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like isoform 2 [Acyrthosiphon pisum]
Length = 899
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 104/312 (33%), Gaps = 81/312 (25%)
Query: 4 VYLSNQSFIKVCG-----KSA-------IPFLQAIITADVLTLPYKIARGSAILTPQGKI 51
+ +S+ S +K+ G + +LQ++ T DV +P + +L +G
Sbjct: 527 IDMSSFSKMKIQGKQDMNDDTESQCNGVVDWLQSLCTNDVN-IPVGGIVHTGMLNERGGY 585
Query: 52 LLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
L+ + E+ +++ S++ ++D L + L + I++ I + N
Sbjct: 586 ENDCLLVRERENCYLMVSPTSQQTRVLDWLKDH-LPKDESIQLADITSMYTVVNI--IGP 642
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKI----ASD-----------------------IKTY 144
+ + S D+ ++ + + ASD + Y
Sbjct: 643 KAGALISELSQTDIDINVQPFTYKTVNIGYASDVMMMAFTHTGEPGFCLYIPSEYALHVY 702
Query: 145 HEL--------------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
L RI I D T P +A + + + L K
Sbjct: 703 DRLISVGFDYGIRDVGSLTQRFMRIEKFIPFWAEDLTRDTT-PFEAGCN--HVVKLDKEY 759
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGS-------PILTDDIEIGTLGVVVGK- 236
+IG+ + R + + I +K M I DDL P PI + +GT+
Sbjct: 760 FIGKFALQRQKDQGITKKLVMFIL--DDLDPDKDIWSWGLEPIYRNGKFVGTVTSAGYGF 817
Query: 237 -----KALAIAR 243
LA R
Sbjct: 818 TMEKLVCLAYIR 829
>gi|224824001|ref|ZP_03697109.1| glycine cleavage system T protein [Lutiella nitroferrum 2002]
gi|224603420|gb|EEG09595.1| glycine cleavage system T protein [Lutiella nitroferrum 2002]
Length = 374
Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 98/310 (31%), Gaps = 52/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G A L+ ++ DV+ LP + R + G IL +++
Sbjct: 56 SHMGQVKLIGAEAAAALETLVPIDVIDLPVGLQRYALFTNDDGGILDDLMVANFGGGVLY 115
Query: 67 LEIDRSKRDSLIDKLLF---YK-----LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117
+ ++ + + I L ++ L ++ +Q + + +F+
Sbjct: 116 VVVNAACKAQDIAHLKSKIGHRCEVVELTDRALLALQGPAAATVLARHAPAVAELTFMHC 175
Query: 118 ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHELRINH 151
R +A V L E A + LR+
Sbjct: 176 TRVELAGVECYVSRSGYTGEDGYEISVPADHAEALARLLLAEPEVQAIGLGARDSLRLEA 235
Query: 152 GI------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G+ +D +T + ++ + G G Y G VV+R + RKR
Sbjct: 236 GLCLYGHDIDTSTTPIEGSLLWAISKARRPGGE--RAGGYPGAAVVARHIAEGVQRKRVG 293
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALT 258
++ G+ ++ D IG + G LA+ + A+ +
Sbjct: 294 LLVKDKVPVREGAELVDADGHTIGKVTS--GGFGPTLGAPLAMGYVASAHAALGTPLFAM 351
Query: 259 VHGVRVKASF 268
V G V
Sbjct: 352 VRGKPVAVEV 361
>gi|328722668|ref|XP_003247632.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like isoform 1 [Acyrthosiphon pisum]
Length = 889
Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 69/284 (24%)
Query: 20 IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79
+ +LQ++ T DV +P + +L +G L+ + E+ +++ S++ ++D
Sbjct: 545 VDWLQSLCTNDVN-IPVGGIVHTGMLNERGGYENDCLLVRERENCYLMVSPTSQQTRVLD 603
Query: 80 KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI-- 137
L + L + I++ I + N + + S D+ ++ + +
Sbjct: 604 WLKDH-LPKDESIQLADITSMYTVVNI--IGPKAGALISELSQTDIDINVQPFTYKTVNI 660
Query: 138 --ASD-----------------------IKTYHEL--------------------RINHG 152
ASD + Y L RI
Sbjct: 661 GYASDVMMMAFTHTGEPGFCLYIPSEYALHVYDRLISVGFDYGIRDVGSLTQRFMRIEKF 720
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
I D T P +A + + + L K +IG+ + R + + I +K M I DD
Sbjct: 721 IPFWAEDLTRDTT-PFEAGCN--HVVKLDKEYFIGKFALQRQKDQGITKKLVMFIL--DD 775
Query: 213 LPPSGS-------PILTDDIEIGTLGVVVGK------KALAIAR 243
L P PI + +GT+ LA R
Sbjct: 776 LDPDKDIWSWGLEPIYRNGKFVGTVTSAGYGFTMEKLVCLAYIR 819
>gi|149908670|ref|ZP_01897331.1| glycine cleavage system T protein [Moritella sp. PE36]
gi|149808212|gb|EDM68151.1| glycine cleavage system T protein [Moritella sp. PE36]
Length = 364
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G A FL+ ++ DV L A + +L G ++ ++ ++ +
Sbjct: 50 SHMTIVDIKGADAKSFLRYLLANDVAKLTVSGKALYTGMLQQDGGVIDDLIVYFFNDEYY 109
Query: 66 ILEIDRSKR 74
L ++ + R
Sbjct: 110 RLVVNSATR 118
>gi|83951062|ref|ZP_00959795.1| aminomethyltransferase [Roseovarius nubinhibens ISM]
gi|83838961|gb|EAP78257.1| aminomethyltransferase [Roseovarius nubinhibens ISM]
Length = 377
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 92/303 (30%), Gaps = 63/303 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A + T D+ L + + +L QGK + +I ++ +F++ +
Sbjct: 59 VHVIGPHASHVIDRATTRDIEKLKPGRSTYACMLNDQGKFVDDCVIYRMGPHSFMV-VHG 117
Query: 72 SKRDSLIDKLLFYKLRSNVII----------------------EIQPINGVVLSWNQEHT 109
S ++L NV + + I VV + T
Sbjct: 118 SGAG--HEQLTMAATGRNVSVLFDDDMHDISLQGPLAVDYLEKHVPGIRDVVYFSHIHTT 175
Query: 110 FSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHELRINHG 152
R + + I + T LR
Sbjct: 176 LFGKPVTISRTGYTGERGYEIFCRRQDAPLIWDTIVEEGAEMGIIPTRFTTLDLLRAESY 235
Query: 153 I---VDPNTDFLPSTIFPHDALMDLLNGISLT----KGCYIGQEVVSRIQHRNIIRKRPM 205
+ N++ P PH + L G+ T K + G E R++ R +
Sbjct: 236 LLFFPYDNSEMYPFEDEPHGDTLWEL-GLDFTVSKGKTGFRGAEEHYRLK--GKERFKIY 292
Query: 206 IITGTDDLPPS-GSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
+ P + G+P+L D +E+G + + +A +D G ALT
Sbjct: 293 GVKLDGTEPAAEGAPLLKDGVEVGVVTIGMYSPLNEHNVGIARMPVDCAVE----GTALT 348
Query: 259 VHG 261
V
Sbjct: 349 VKN 351
>gi|332665554|ref|YP_004448342.1| Aminomethyltransferase [Haliscomenobacter hydrossis DSM 1100]
gi|332334368|gb|AEE51469.1| Aminomethyltransferase [Haliscomenobacter hydrossis DSM 1100]
Length = 377
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED-------TFI 66
V GK A+ +Q I T D L A+ SA+ QG I+ L+ ++ ED ++
Sbjct: 56 VRGKQALELIQQITTNDASKLGIGQAQYSAMPNEQGGIIDDLLVYRLPEDNCADGERAYM 115
Query: 67 LEIDRSKRD 75
+ ++ S +
Sbjct: 116 MVVNASNIE 124
>gi|326330489|ref|ZP_08196797.1| glycine cleavage system T protein [Nocardioidaceae bacterium
Broad-1]
gi|325951764|gb|EGD43796.1| glycine cleavage system T protein [Nocardioidaceae bacterium
Broad-1]
Length = 367
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 51/317 (16%), Positives = 98/317 (30%), Gaps = 72/317 (22%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A L A++ + AR S I G I+ ++ ++EE+
Sbjct: 51 LSHMGEIEVTGPEAGRALDHALVGRP-SAIGIGRARYSMICAEDGGIIDDLVVYRLEEER 109
Query: 65 FILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + S +L + Y V+ + ++ ++ D
Sbjct: 110 YLVVANASNVHVVAPALASRAEGY---DAVVRDASAEWALIAVQGPASAAIVAALTDLDV 166
Query: 121 SIA-------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
+VLL RT E AS +
Sbjct: 167 PSLRYYAIDAGTVAGVEVLLARTGYTGEDGFEIYCAPASAAAVWEALTEAGTPHGLQPAG 226
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199
LR+ G+ + T P +A + + +S K ++G+ ++ +
Sbjct: 227 LACRDTLRLEAGMPLYGHELNRDTT-PFEAGLGRV--VSFDKPDGFVGEAALAVRRDEGP 283
Query: 200 IRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVVGK------KALAIARIDKVDHAI 251
++ P +G ++ EIG + A+A R D
Sbjct: 284 RSVLVGLVAAGRRSPRAGYAVVDPASGDEIGVVTSGSPSPTLGRPIAMAYVRPD------ 337
Query: 252 KKGMALTVHGVRVKASF 268
L GV+V+
Sbjct: 338 -----LAAAGVKVQVDV 349
>gi|308178399|ref|YP_003917805.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
gi|307745862|emb|CBT76834.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
Length = 375
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 53/307 (17%), Positives = 101/307 (32%), Gaps = 58/307 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G A L + ++ + A+ S IL +GKI+ ++ ++EE+ F
Sbjct: 55 LSHMGEVYLTGPEAGKALNTALAGNLNVMKVGKAKYSLILNAEGKIIDDLIVYRLEEEKF 114
Query: 66 IL---------------------EI---DRSKRDSLID---------------------- 79
++ ++ D S R SLI
Sbjct: 115 LVVPNAGNAPVVAAELAARAAGFDVVVDDASDRQSLIAVQGPNAEAILKNLSADEATVQA 174
Query: 80 --KLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-EK 136
+L +Y + V + + IN ++ I+ + A G + E
Sbjct: 175 VTELKYY---AAVNVVLGGINVLLARTGYTGEDGFELIIENEDAAAMWEKTVEAGKDHEL 231
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQ 195
+ + + LR+ G+ + P DA + +S K ++G+E + ++
Sbjct: 232 VPCGLASRDSLRLEAGMPLYGNELSLERT-PFDAGFGPV--VSFKKEENFVGREALEALR 288
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAI-KK 253
RK + G I+ D IG + L + VD +
Sbjct: 289 GATPARKLVGLKGLGKRAGRGGYAIVKDGATIGEITSGQPSPTLGYPVALGYVDAEFGEV 348
Query: 254 GMALTVH 260
G L V
Sbjct: 349 GTELEVD 355
>gi|293651802|pdb|3A8K|A Chain A, Crystal Structure Of Etd97n-Ehred Complex
gi|293651803|pdb|3A8K|B Chain B, Crystal Structure Of Etd97n-Ehred Complex
gi|293651804|pdb|3A8K|C Chain C, Crystal Structure Of Etd97n-Ehred Complex
gi|293651805|pdb|3A8K|D Chain D, Crystal Structure Of Etd97n-Ehred Complex
Length = 364
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 50 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDNLIVYYFTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ ++ ++
Sbjct: 110 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATL 159
>gi|23014343|ref|ZP_00054164.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase)
[Magnetospirillum magnetotacticum MS-1]
Length = 371
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A+ L++++ D+ L R S G IL +ISK+ ED
Sbjct: 57 SHMGQAEIKGARAVELLESLVPGDIRALGLGKTRYSVFTNDHGGILDDLMISKLAEDHLF 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L I+ + + + L + L V + + ++ + ++
Sbjct: 117 LVINAACKHADFAHLKAH-LEGKVELRMIEDRSLLALQGPGAAAAMATL 164
>gi|146300317|ref|YP_001194908.1| glycine cleavage system aminomethyltransferase T [Flavobacterium
johnsoniae UW101]
gi|146154735|gb|ABQ05589.1| glycine cleavage system T protein [Flavobacterium johnsoniae UW101]
Length = 360
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 101/315 (32%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + + D TL A+ S + +G I+ +I K++E+ ++
Sbjct: 49 SHMGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIIYKMKEEQYL 108
Query: 67 LEIDRSKRDSLIDKLLFY-----KLRS-------------NVIIEIQPINGVVLSWNQEH 108
L ++ S + + + Y ++R+ + +Q + V LS +
Sbjct: 109 LVVNASNIEKDWNWISSYNDLGVEMRNLSDDYSLLAIQGPKAVEAMQALTSVDLSAITYY 168
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE-------------KIASDIKTY----------H 145
F F I + G E K+ Y
Sbjct: 169 HFEVGDFAGIEHVIISATGYTGSGGFEIYCKNNEVEQIWNKVFEAGAAYGIKPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK + E + + + + RK
Sbjct: 229 TLRLEMGFCLYGNDI-NDTTSPLEAGLGWI--TKFTKD-FTNSEALKKQKEAGVARKLIA 284
Query: 206 IITGTDDLPPSGSPILTDDIEI------GTLG-VVVGKKALAIARIDKVDHAIKKGMALT 258
+P I+ + + GT+ + L + + +
Sbjct: 285 FEMQERAVPRHDYEIVDGEGNVIGIVTSGTMSPSMNKGIGLGYVTVANSAVDSDIFIRIR 344
Query: 259 VHGVRVKASFPHWYK 273
+ V K +YK
Sbjct: 345 KNDVPAKVVKLPFYK 359
>gi|197336879|ref|YP_002158336.1| glycine cleavage system T protein [Vibrio fischeri MJ11]
gi|197314131|gb|ACH63580.1| glycine cleavage system T protein [Vibrio fischeri MJ11]
Length = 372
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 51/313 (16%), Positives = 111/313 (35%), Gaps = 56/313 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L+A++ D++ LP + R + G I+ +++ D
Sbjct: 54 SHMGQLRLKGQNAAAALEALVPVDIIDLPSQKQRYAFFTNDDGGIMDDLMVANFG-DHLF 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------SNSSFID 117
+ ++ + ++ I L L ++V IE+ ++ + +N F+D
Sbjct: 113 VVVNAACKEQDIAHLAA-NLPADVEIEVIEDRSLLALQGPQAADVLSRLQSSVANMLFMD 171
Query: 118 -------------ERFSIADVLLHRTWGHNEKIASDIKT--------Y------HELRIN 150
R + N+K+A +T + LR+
Sbjct: 172 TAVVEINGIECYVSRSGYTGEDGYEISVPNDKVAELAETLTSFEEVEWIGLGARDSLRLE 231
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-------GCYIGQEVVSR-IQHRNIIRK 202
G+ D T P +A + L IS + + G +V+ + I+ +++ RK
Sbjct: 232 CGLCLYGHDLDT-TTTPVEASL--LWAISKNRRADGERAAGFPGADVILKQIETKDVNRK 288
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255
R ++ T G + +D EIG + ++A R D +
Sbjct: 289 RVGLVGQTKAPVREGCKLYDANDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFA 348
Query: 256 ALTVHGVRVKASF 268
+ + +
Sbjct: 349 DVRGKKLPMTVEK 361
>gi|290991875|ref|XP_002678560.1| aminomethyltransferase [Naegleria gruberi]
gi|284092173|gb|EFC45816.1| aminomethyltransferase [Naegleria gruberi]
Length = 446
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ +KV G A FL+ + A+++ L AR + G IL +I+K E
Sbjct: 92 SHMGQVKVSGADAQEFLEKVTPANIIQLKINQARLTQFTNENGGILDDLMITKKSESNGV 151
Query: 64 -TFILEIDRSKRDSLIDKL 81
F + I+ + DS + L
Sbjct: 152 FDFYVVINAACVDSDMAHL 170
>gi|169614295|ref|XP_001800564.1| hypothetical protein SNOG_10285 [Phaeosphaeria nodorum SN15]
gi|111061500|gb|EAT82620.1| hypothetical protein SNOG_10285 [Phaeosphaeria nodorum SN15]
Length = 850
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 82/272 (30%), Gaps = 55/272 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A+ LQ + T+DV + +L G IL IS+++ D F ++ +
Sbjct: 515 EVAGPGAVHLLQRLATSDVTK-QAGSITHTLLLNSHGGILSDIFISRLDGDLF--QVGAN 571
Query: 73 KRDSLI----------DK-----------------LLFYKLRS-NVIIEIQPINGVVLSW 104
L L + R+ +VI I P + S
Sbjct: 572 TATDLAYLAREARKQTKHTPGQWAQVRDITGSTCCLGLWGPRARDVIRAISPEDFSNKSL 631
Query: 105 -----------NQEHTFSNSSFIDE---RFSIADVLLHRTWG-------HNEKIASDIKT 143
T SF+ E R W +A+
Sbjct: 632 PYMGVKKTSLAGIPVTMFRKSFVGEHGWEIQTTPEYGQRLWDLLWQSGKPQGLVAAGRAA 691
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202
++ LRI GI +D P +A + + K + G+ + + + R+
Sbjct: 692 FNGLRIEKGIRASGSDMTSEH-NPWEAGVTYAIQMD-KKADFAGKAALEPLSRKTSARRL 749
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + + P+ + G +
Sbjct: 750 RCLTVDDGRSMCLGKEPVFYNGKAAGYVTTAA 781
>gi|307325892|ref|ZP_07605091.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
violaceusniger Tu 4113]
gi|306888384|gb|EFN19371.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
violaceusniger Tu 4113]
Length = 832
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 83/275 (30%), Gaps = 59/275 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A+ FLQ + T + + +L G I ++++ E F + +
Sbjct: 512 LTVTGPGALDFLQRMTTNQLAK-KPGAVTYTLLLDEAGGIRSDLTVARLSERHFQVGANG 570
Query: 72 SKRDSLIDKLLFYK-----LRSN---VII-EIQPINGVVLSWNQ----------EHTFSN 112
+D LL + RS V I +I P + W FS+
Sbjct: 571 GL---DLDWLLRHAPEGGTSRSKTGGVHIADITPGTCCIGVWGPLARDLVQPLTRDDFSH 627
Query: 113 SSF---------------IDERFSIADVLLHRTWGHNE-----------------KIASD 140
+F R S L + + IA+
Sbjct: 628 EAFGYFKARQTYIGHVPVTAMRLSYVGELGWELYTTADMGLRLWDTLWEAGRRHGVIAAG 687
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
++ LR+ G D P++A + + + KG +IG+ + R
Sbjct: 688 RSAFNSLRLEKGYRAWGHDMTTEHD-PYEAGVGF--AVRMDKGDFIGRAALKGRGERTAA 744
Query: 201 RKRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVV 234
RK + G P+ D + G +
Sbjct: 745 RKLTCLTLDDPAAVVMGKEPVYADGVPAGYVTSAS 779
>gi|227539214|ref|ZP_03969263.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300]
gi|227240896|gb|EEI90911.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300]
Length = 360
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 52/305 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G + + LQ + + DV L + + G ++ FL +I+E T+ L ++ S
Sbjct: 57 LKGDNVLDLLQKVSSNDVSKLYDGKVQYGYLPNENGGVVDDFLTYRIDEKTYFLVVNASN 116
Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ + + Y L + +Q + + L+ + +TF+ +F
Sbjct: 117 IEKDWNWISKYNTYGVEMKDISDQTSLFAVQGPKAAEALQSLTDIELAPMEYYTFAKGTF 176
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152
+ + G E ++ + LR+ G
Sbjct: 177 AGVDNVLVSATGYTGAGGFEIYVANEDAQKVWDAIFEAGAAYGIKPIGLGARDTLRLEMG 236
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D +T P A + + TK ++ + + + +K
Sbjct: 237 FCLYGNDIDDNTS-PLAAGLGWV--TKFTKD-FVNSANLKAEKEAGVKQKLVGFEMIDRG 292
Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+P I+ D IG + L + + + ++ K
Sbjct: 293 IPRHDYEIVDADGNVIGRVTSGTQSPSLKKSVGLGYVDQAFAKEGTEIFIHIRNQKIKAK 352
Query: 266 ASFPH 270
+ P
Sbjct: 353 VAKPP 357
>gi|300718217|ref|YP_003743020.1| aminomethyltransferase [Erwinia billingiae Eb661]
gi|299064053|emb|CAX61173.1| Aminomethyltransferase [Erwinia billingiae Eb661]
Length = 364
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L ++ ++ + ED F
Sbjct: 50 SHMTIVDLKGARTREFLRYLLANDVAKLTVPGKALYTGMLNASAGVIDDLIVYFMTEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L ++ + R+ + + + V + ++ ++ + + DE
Sbjct: 110 RLVVNSATREKDLAWIGEHATPFGVELTLRDDLSLIAVQGPQAQEKAQTLFDE 162
>gi|19114927|ref|NP_594015.1| glycine decarboxylase T subunit [Schizosaccharomyces pombe 972h-]
gi|12643537|sp|O14110|GCST_SCHPO RecName: Full=Probable aminomethyltransferase, mitochondrial;
AltName: Full=Glycine cleavage system T protein;
Short=GCVT; Flags: Precursor
gi|2388965|emb|CAB11698.1| glycine decarboxylase T subunit [Schizosaccharomyces pombe]
Length = 387
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 91/267 (34%), Gaps = 42/267 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G++A +L++I + + L + SA G I+ +ISK +E+T+ + + +
Sbjct: 79 VRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIVTNAAC 138
Query: 74 RDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT----------------FSNSSFI 116
+ L + V +E ++ E F S+++
Sbjct: 139 SEKDEANLKKHIENWKGVELERVQGRALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYV 198
Query: 117 DER-----FSIADVLLHRTWGHN--EKIASDIK---------------TYHELRINHGIV 154
D + FS + + + E+++ D LR+ G+
Sbjct: 199 DFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGARDTLRLEAGMC 258
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
+D T P + + + G K G ++G + + R+R I
Sbjct: 259 LYGSDI-DDTTSPVEGSLSWIIGKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPA 317
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKALA 240
GS + D +E+G + L
Sbjct: 318 RH-GSAVEVDGVEVGQVTSGCPSPTLG 343
>gi|254466353|ref|ZP_05079764.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
gi|206687261|gb|EDZ47743.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
Length = 789
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q I T ++ L +A+ P G ++ + ++ +D F
Sbjct: 459 LSALRKFEITGPDAEALCQYIFTRNIKKLAVGQVVYTAMCYPHGGMIDDGTVFRLGKDNF 518
>gi|320163428|gb|EFW40327.1| glycine cleavage system protein T [Capsaspora owczarzaki ATCC
30864]
Length = 408
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 49/269 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G + FL++++ ADV L A S +G I+ +IS + T + +
Sbjct: 91 RLHGAQRVQFLESLVVADVAGLAETAATLSVFTNEKGGIIDDTVISNAGQ-TLYVVSNAG 149
Query: 73 KRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDER--------- 119
D + L + + +Q + +L+ + +
Sbjct: 150 CADKDLAHLNAQLARFNAEKKADVRLQIVETALLALQGPKAAAALQALVPSKDLSKLPFM 209
Query: 120 --------FSIADVLLHR------------------------TWGHNEKIASDIKTYHEL 147
+A+ + R + + + L
Sbjct: 210 HGVDGVTVDGVANCRVTRCGYTGEDGFEISIPNQHAVQIAEKLLTNPAVKLAGLGPRDSL 269
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206
R G+ D T P +A + +G ++G +V+ + + R R +
Sbjct: 270 RTEAGLCLYGNDI-DETTTPVEAALKWTIAKRRREQGGFLGDKVILQQLKDGVSRTRIGL 328
Query: 207 ITGTDDLPPSGSPI-LTDDIEIGTLGVVV 234
+ S I D IG +
Sbjct: 329 VADVGPAARQHSKILTADGEVIGEVTSGC 357
>gi|198472757|ref|XP_001356055.2| GA19575 [Drosophila pseudoobscura pseudoobscura]
gi|198139149|gb|EAL33114.2| GA19575 [Drosophila pseudoobscura pseudoobscura]
Length = 410
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 105/310 (33%), Gaps = 57/310 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK A L+++ TAD+L +P + QG IL +++K+ E + + +
Sbjct: 87 VRGKDAAACLESVCTADILGIPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNAAM 146
Query: 74 RDS----LIDKLLFYKLR-SNVIIE-IQPINGVVLSWNQEHTFSN--------------- 112
+ + +K + +V +E + P + +++ +
Sbjct: 147 KQQDMNIISAAASSFKSQGRDVSVEFLAPSDQSLIAVQGPRVAAELAKLLAPATALDQLY 206
Query: 113 --SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKTYHE 146
SF+ I +V + R GH + + +
Sbjct: 207 FMQSFVGTMAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDS 266
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ +D T P +A + L + G +VV Q + +++R +
Sbjct: 267 LRLEAGLCLYGSDIDAQTT-PVEAALAWLVAKRRRAARDFPGADVVL-SQLKGGVQRRRV 324
Query: 206 IITGTDDLPPS---GSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258
+ PP G I + ++G + + +A+ + + A + L
Sbjct: 325 GLQMLGAKPPPARSGVAIFSGGQQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELK 384
Query: 259 VHGVRVKASF 268
V +A
Sbjct: 385 VRDKVYEAEI 394
>gi|328849009|gb|EGF98199.1| hypothetical protein MELLADRAFT_51063 [Melampsora larici-populina
98AG31]
Length = 413
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 92/268 (34%), Gaps = 44/268 (16%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G SA FL ++ A + T+ + S +L +G I+ +I+K + + L + +
Sbjct: 99 KISGPSATEFLLKLLPASLKTMKPFTSTLSVMLNEEGGIIDDCMITKWSDQEWYLVTNAN 158
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------------ 120
+R ++ + + + IE+ G++ + + + +D+
Sbjct: 159 RRQRDLNWINQHIQSFDAKIEVMENWGLIALQGPKSSEILQTLLDDSSLKLNDTFFFGQS 218
Query: 121 ---SIADVLLH--------------------------RTWGHNEKIASDIKTYHELRINH 151
I + +H + + LR+
Sbjct: 219 VHTEINGIQVHIARSGYTGEDGFEISIPPNQSESITSSLLNQPGVTLAGLAARDSLRLEA 278
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ TD T+ +A + + I + ++G+E + I R+R ++
Sbjct: 279 GLCLYGTDL-DETVGVGEAGLGWV--IGNQRTGFLGEERTRKEIGSEIKRRRVGLLIEKG 335
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKAL 239
SG+ I +G + + +L
Sbjct: 336 APARSGAMIFNKKNPVGVITSGIPSPSL 363
>gi|296194260|ref|XP_002744877.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Callithrix
jacchus]
Length = 866
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 99/317 (31%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + G+ +I L + + + S +LTP+G++ +S
Sbjct: 532 IDLTPFGKFNIKGRDSIRLLDRLFANIIPKV--GFTNISHMLTPKGRVYAELTVSHQCPG 589
Query: 64 TFILEI-DRSKRDSL---------------IDKLL--FYKL-----RS-----NVIIEIQ 95
F+L S+ L I + F L R+ + E
Sbjct: 590 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDEFGVLGVAGPRARKILQKLTSEDL 649
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------D 140
+ + SN R S L + E + +
Sbjct: 650 SEDVFKFLQTKSLKISNIPVTAIRISYTGELGWELYHRREDSVALYDMIMNAGQEEGIDN 709
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ ++ T P +A ++ + L K +IG++ + +I+ +
Sbjct: 710 FGTYAMNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKAK 766
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TDD+ P G+ I + +G + A A I+ +
Sbjct: 767 GLKRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPIELSEVG 826
Query: 251 IKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 827 QQVEVELLGKNYPAVII 843
>gi|87300431|gb|ABD37402.1| GcvT [Shigella boydii]
Length = 138
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ E+ F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTENFF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|407475|emb|CAA52800.1| T-protein of the glycine decarboxylase complex [Pisum sativum]
Length = 408
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 88/280 (31%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK I FL+ ++ ADV L + +G + +I+K+
Sbjct: 80 SLFDVSHMCGLSLKGKDVISFLEKLVIADVAALANGTGTLTVFTNEKGGAIDDSVITKVT 139
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
ED L ++ ++ L
Sbjct: 140 EDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199
Query: 83 FYKLRSNV---IIEIQPING-----VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + + ING + E F S + +A LL ++ G
Sbjct: 200 KEDL-SKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKI 258
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G +V+ +
Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDLE-QHITPIEAGLTWAIGKRRRAEGGFLGADVILK 315
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEIGTLGV 232
+R I+ + P S S I IG +
Sbjct: 316 QLADGPSIRRVGFIS-SGPPPRSHSEIQDEGGNNIGEVTS 354
>gi|149201270|ref|ZP_01878245.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
gi|149145603|gb|EDM33629.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
Length = 404
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 102/308 (33%), Gaps = 55/308 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F+Q + D+ + + I +G IL ++ ++ E+ F + +
Sbjct: 91 VEITGPDAARFVQMLTPRDLSKMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 150
Query: 72 SKRDSLIDKLLFYKLRS--NVII---EIQPIN-------------------GVVLSWNQE 107
S ++ + S +V I ++ P+ + W +E
Sbjct: 151 S---DILLWAQGVAVHSGMDVTIGEPDVSPLQLQGPKSGLIMQELFGESIMELKYYWLRE 207
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------TYHELRINH 151
+ R + L + + + + T RI
Sbjct: 208 LELDGIPLLVSRTGWSSELGYEIYLRDSAHGDALWERIMAAGMPFGLKPGHTSSIRRIEG 267
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ + D P++ +D L + + +IG+ + I+ + RK+ +I
Sbjct: 268 GMLSYHAD-ADIKTNPYELGLDRLVNVDIEAE-FIGKAALRHIKAQGPSRKQIGLIIDGA 325
Query: 212 DLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262
L + I +++G + V ALA+ + + + + + V
Sbjct: 326 PLKGPNTTFWAINVAGVQVGKVTSAVYSPRLERNIALAMVAAEHANIGAEVEIVTSQGPV 385
Query: 263 R-VKASFP 269
R V P
Sbjct: 386 RAVMVERP 393
>gi|119385078|ref|YP_916134.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222]
gi|119374845|gb|ABL70438.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222]
Length = 370
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A L+ ++ AD+ L R +G IL +I+ D +
Sbjct: 53 SHMGQVILRGPGAAEALEGLVPADITGLAEGRQRYGLFTNAEGGILDDLMIANKG-DHLL 111
Query: 67 LEIDRSKRDSLIDKLL 82
L ++ + + I L
Sbjct: 112 LVVNAACAEQDIAHLR 127
>gi|254455685|ref|ZP_05069114.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Candidatus Pelagibacter sp. HTCC7211]
gi|207082687|gb|EDZ60113.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Candidatus Pelagibacter sp. HTCC7211]
Length = 775
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 58/297 (19%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS ++ G A +Q +T +V L +A+ G +L + K +
Sbjct: 442 ATDLSPLRKFEILGPDAENLMQYTLTRNVKKLSVGQVVYTAMCYENGCMLDDGTLFKFGQ 501
Query: 63 DTF------------------------ILEIDRSKRDSLI-------DKLLFYKLRSNVI 91
D F ++ ++ L + + +
Sbjct: 502 DNFRWIGGDEYSGEWLKEQAKKKKYKVWIKSATDHIHNIAVQGPNSRKILEKFVWTAPIQ 561
Query: 92 IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139
I + + + + + + R L + W H + +
Sbjct: 562 PSITELEWFRFNIARIEHETGTPIVISRTGYTGELGYEIWCHPKDASEVWDKVWEAGKEF 621
Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
++ +RI G++ +F T P +A + + +IG+E + I
Sbjct: 622 DITPLGLEALDMVRIEAGLIFYGYEFNDQTD-PFEAGIGFTVPLKTKDDDFIGKEEL--I 678
Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVV-----VGKKALAIARID 245
+ + +++ + + P G + +IG + +GK +A+ RID
Sbjct: 679 KRKANPQRKLVGLELVGHEPAVNGDCVHVGRAQIGEITSGMLSPKLGKN-IALCRID 734
>gi|66801565|ref|XP_629708.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4]
gi|74851073|sp|Q54DD3|GCST_DICDI RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|60463092|gb|EAL61287.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4]
Length = 403
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK + F ++I+ AD+ LP ++ S +G I+ +I+ D+
Sbjct: 73 SHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNAG-DSLY 131
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ D I +
Sbjct: 132 VVVNAGCADKDISHIN 147
>gi|190891940|ref|YP_001978482.1| aminomethyltransferase [Rhizobium etli CIAT 652]
gi|190697219|gb|ACE91304.1| aminomethyltransferase protein [Rhizobium etli CIAT 652]
Length = 356
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 94/300 (31%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L+L R G IL +I+ + +D + ++ S +++
Sbjct: 49 EDAALALESLVPVDILSLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKEA 107
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 108 DLAHLQAHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 167
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A+ + R H + A + LR+ G+ D
Sbjct: 168 VSRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 227
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G + G + R+R + + P G
Sbjct: 228 TTS-PVEAALEWAMQKARRAGGTRAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 285
Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D EIG + V G A+ + + + + V S
Sbjct: 286 HARLYADAEGQTEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTQVYAEVRGKFLPVTVS 345
>gi|119946355|ref|YP_944035.1| glycine cleavage system T protein [Psychromonas ingrahamii 37]
gi|119864959|gb|ABM04436.1| glycine cleavage system T protein [Psychromonas ingrahamii 37]
Length = 376
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 93/269 (34%), Gaps = 46/269 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G++A L+A++ D++ LP R + QG I ++ + D +
Sbjct: 58 SHMGQVRLFGENAAEGLEALVPVDIMDLPVGKQRYAFFTNEQGGINDDLMVGNLG-DFLL 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH----TFSNSSFIDERF-- 120
+ ++ + + I L L S+V +E+ ++ + N + + RF
Sbjct: 117 VVVNAACKQQDIAHLRA-NLPSDVRLEVIEDRALLALQGPQAVEVLAKINPAVNNMRFMD 175
Query: 121 ------------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
+ A+ L E + LR+
Sbjct: 176 AMKIQLAGVECYVSRSGYTGEDGFEISVPAAQAEALARELLAFAEVEWIGLGARDSLRLE 235
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVV-SRIQHRNIIRKRP 204
G+ D T P +A + G + G +++ +I+ +NI RKR
Sbjct: 236 AGLCLYGHDL-DETTTPVEASLLWGISKARRAEGSRPGGFPGADIILEQIKSKNITRKRV 294
Query: 205 MIITGTDDLPPSGSPIL-TDDIEIGTLGV 232
++ + G + D +IG +
Sbjct: 295 GLLGTSKAPVREGCELFDAADNKIGIVTS 323
>gi|260461847|ref|ZP_05810093.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|319785372|ref|YP_004144848.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|259032488|gb|EEW33753.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|317171260|gb|ADV14798.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 825
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 83/270 (30%), Gaps = 53/270 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEEDTFILEI 69
++V G A F+ +I LP K R + +L G+I L I ++ +D F
Sbjct: 494 VQVSGPGAAKFIDRLIPN---RLPSKPGRIALTHLLNENGRIELETTIVRLADDRFYFTC 550
Query: 70 DRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQE-----------HTFSNSSFID 117
L+D L F + +V I L+ N +N +F
Sbjct: 551 AAFFEQRLLDYLRFARTDHDDVTITNLSDAWGALALNGPRSREILAPNTSAALTNEAFPW 610
Query: 118 E---------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD------- 155
R S A + G E I + HE+ G++D
Sbjct: 611 LTAQEIEIAGEKVWAFRMSYAGEVGWEFHGPKESIPAVYDALHEIGDAMGLIDYGSFAMN 670
Query: 156 ---------PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
+ P D++ + K + G++ + +
Sbjct: 671 VMRLEKMFKGAGELTNEVTLPE---ADVMRFVKTDKAEFRGKQATLAALEKGPSWICAYL 727
Query: 207 ITGTDDLPP--SGSPILTDDIEIGTLGVVV 234
+D + G +L D ++G++ +
Sbjct: 728 QIESDGVSDGNGGEAVLMGDRQVGSVTSIA 757
>gi|163795042|ref|ZP_02189011.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199]
gi|159179861|gb|EDP64388.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199]
Length = 367
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 41/302 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+ ++ D++ L R + G IL +++ D
Sbjct: 56 SHMGQLRIDGHDAGSRLETLVPGDIVGLGTGRMRYTQFTNADGGILDDLMVTNAG-DHLF 114
Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ ++ + +++ L +L ++ +Q + + +F
Sbjct: 115 VVVNAACKEADTALLKGSLGKAVVELPDRALLALQGPAAEGVLKTLAPAAAEMAFMTYAA 174
Query: 116 ----------------------IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGI 153
I A L + H + + LR+ G+
Sbjct: 175 MDVAGIPCFVTRSGYTGEDGYEISVPADRAATLAEQLLAHPDVEPIGLGARDSLRLEAGL 234
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D +T AL + +G + G + R+R I
Sbjct: 235 CLYGHDIDTTTSPIEAALTWSIGKRRREEGGFPGAVRIQSEIANGPARRRVGIKPEGRAP 294
Query: 214 PPSGSPIL-TDDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ I D IG + V G A+ + + + +
Sbjct: 295 AREGTEITDADGRAIGQVTSGGFGPSVDGPVAMGYVETGFAKDGTAVQLVVRGKPMPARV 354
Query: 267 SF 268
+
Sbjct: 355 TR 356
>gi|134102150|ref|YP_001107811.1| glycine cleavage system aminomethyltransferase T [Saccharopolyspora
erythraea NRRL 2338]
gi|291007598|ref|ZP_06565571.1| glycine cleavage system aminomethyltransferase T [Saccharopolyspora
erythraea NRRL 2338]
gi|166221565|sp|A4FLG1|GCST_SACEN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|133914773|emb|CAM04886.1| putative glycine cleavage system protein T (aminomethyltransferase)
[Saccharopolyspora erythraea NRRL 2338]
Length = 367
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 50/310 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L++ I++ G A L + A+ + AR + I +G +L ++ ++ E +
Sbjct: 51 LTHMGEIRISGPQAPEALDYALVANASAITVGRARYTMICNSEGGVLDDLIVYRLGEQEY 110
Query: 66 I----LEIDRSKRDSLIDKLLFY-KLRSNV-----IIEIQPINGVVLSWNQEHTFSNSS- 114
+ L +++ + +V +I +Q V + T ++
Sbjct: 111 LVVANAANAAVVSAELAERVARFEASHEDVSDDYALIAVQGPKAVDILAPLTSTDLSTVK 170
Query: 115 -FIDERFSIAD--VLLHRTWGHNEK-------IASDIKTYHE------------------ 146
+ R +A V+L RT E A +
Sbjct: 171 YYAGYRSEVAGARVMLARTGYTGEDGFELFTSPADAPAVWQALADSGAEHGLRPAGLSCR 230
Query: 147 --LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKR 203
LR+ G+ + + + P A + + + L K G ++G+ ++ + RK
Sbjct: 231 DTLRLEAGMPLYGNEL-SAELTPFHANLGRV--VKLDKPGDFVGKAPLAAAAEKPTERKL 287
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
+ T P G +L EIG + +A+A +D+ + +
Sbjct: 288 VGLRTDQRRAPRHGYRVLDAGGAEIGVVTSGAPSPTLGHPIAMAYVDRDHAEPGTALQVD 347
Query: 259 VHGVRVKASF 268
+ G V
Sbjct: 348 IRGTAVPVEV 357
>gi|68005366|ref|XP_670005.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56484827|emb|CAI01638.1| conserved hypothetical protein [Plasmodium berghei]
Length = 222
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
F + P D D N IS KGCYIGQEV++R +++ +I K
Sbjct: 64 FTFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 106
>gi|85704211|ref|ZP_01035314.1| aminomethyl transferase family protein [Roseovarius sp. 217]
gi|85671531|gb|EAQ26389.1| aminomethyl transferase family protein [Roseovarius sp. 217]
Length = 369
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 98/307 (31%), Gaps = 64/307 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A +Q + D+ + I+ G +L + K+ ED + + I D
Sbjct: 66 VELRGPDAAKLMQMLTPRDLRGMTAGQCYYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118
+ + + R +V+++ ++ + + + + F D
Sbjct: 126 SDLLYWI--RATAHGWRLDVLVDEPDVSPLAVQGPRADDLMAAVFGDAVRDLRFFRFGHF 183
Query: 119 RFSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINHG 152
F D+++ R+ + + +H L RI G
Sbjct: 184 DFQGRDMVIARSGYSKQGGFEIYVEGGDIGMPLWHALMEAGKGMDVHAGCPNLIERIEGG 243
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTD 211
++ D PH+ + GC IG++ + R+ +++ R + I G
Sbjct: 244 LLSYGNDMTDDNT-PHECGLGKFCNTHTAIGC-IGRDALLRVAKEGPVQQIRALEIEG-A 300
Query: 212 DLPPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVR 263
+P P++ +G + A+A+ R+ D G
Sbjct: 301 AVPRCDRWWPVMAGGKRVGRVSSATWSPDFGVNVAIAMVRMTHWDA-----------GTE 349
Query: 264 VKASFPH 270
V P
Sbjct: 350 VTVETPE 356
>gi|82753086|ref|XP_727534.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483427|gb|EAA19099.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 346
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
F + P D D N IS KGCYIGQEV++R +++ +I K
Sbjct: 202 FTFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 244
>gi|310825894|ref|YP_003958251.1| putative glycine cleavage system T protein [Eubacterium limosum
KIST612]
gi|308737628|gb|ADO35288.1| putative glycine cleavage system T protein [Eubacterium limosum
KIST612]
Length = 342
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 87/284 (30%), Gaps = 51/284 (17%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
++V G A FL ++ A + + A+ + +L G I+ ++ ++E++ +
Sbjct: 33 LLEVKGPDAQAFLNKMLVASIGKMEIGEAKYTTMLNDDGIIIDDVIVFRVEKEVLWI--S 90
Query: 71 RSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDE----------- 118
D+LI +K + V +I + + + F+ +
Sbjct: 91 TLYIDALIAWFDAHKENAKVEYRDITEKTTMYAVQGPDSRAVLNDFLKDNIDSMKYFTIE 150
Query: 119 ------------RFSIADVLLHRTWGHN-------EKIASDIKTYHELRINHGIVDPNTD 159
R L + EK+A K + +I ++ +
Sbjct: 151 NNMVGDIPVKIARSGYTGELGFEIYCFPEDKTFIEEKLADSGKQFDIKKITTDVIITSLP 210
Query: 160 FLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGT 210
+ P +A + K ++G+ + +++ RK +
Sbjct: 211 REKGFVLMSDLAGTNPLEADFGWT--VDWNKD-FVGKSALEKVKANGAKRKLIGFTVEDD 267
Query: 211 DDLPPSGSPILTDDIEIGTLG------VVVGKKALAIARIDKVD 248
G+ + I G + V A+ +DK
Sbjct: 268 AAQVKPGADVKVGGIVAGKVTMFTYGYTVEKNIGFALVDVDKAK 311
>gi|182677726|ref|YP_001831872.1| glycine cleavage system T protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633609|gb|ACB94383.1| glycine cleavage system T protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 384
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 95/300 (31%), Gaps = 47/300 (15%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT----FILEI 69
+ G+ A L+ ++ D+ TL R + +L P+G IL +++++ +D L +
Sbjct: 73 LEGQGAAARLETLVPGDLTTLAPGRMRYTQLLNPEGGILDDLMVTRLADDAAGERLFLVV 132
Query: 70 DRSKRDSLIDK-------LLFYKLRSNVIIEIQPINGVVL---SWNQEHTFSNSSFIDER 119
+ + + L L ++ +Q + + + T S I+
Sbjct: 133 NAATKAQDFAHIGASLPDLRLTLLEDRALLALQGPSAATVLAKHFPAVATMPFMSLIETE 192
Query: 120 FSIADVLLHR-----------------TWGHNEKIASDIKTY-------HELRINHGIVD 155
A + R E + D + + LR+ G+
Sbjct: 193 REGALWRISRSGYTGEDGFEIAVPAGAAEAFAETLLGDEEVWPIGLGARDSLRLEAGLCL 252
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLP 214
D P T L+ ++ G + G V R R+R + I G
Sbjct: 253 YGHDIDPITTPIEAGLLWSISKRRREGGGFPGAARVQREIAEGPARRRVGLKIEGKIPAR 312
Query: 215 PSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ IG + G A +A+ + A + + V G + A+
Sbjct: 313 EGAKIETLEGEVIGLVTS--GGFAPSLGAPIAMGYVASAHAANGTALQVIVRGKPLAATI 370
>gi|254509474|ref|ZP_05121541.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium
KLH11]
gi|221533185|gb|EEE36173.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium
KLH11]
Length = 1004
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 89/295 (30%), Gaps = 68/295 (23%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 678 VKGPDAGKFLDMLYTNMMSTLKVGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 737
Query: 74 RDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQE------------HTF 110
+ + + Y +NV E VV ++
Sbjct: 738 AERIHGHMEEWLQTEWWDWKVYV--ANVT-EQYAQVAVVGPNARKVLEKLGGMDVSREAL 794
Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---KIASDIKT----YHE----------------- 146
+ D R D +R E +IA +
Sbjct: 795 PFMEWRDGRIGDFDCRAYRISFSGELSYEIAVPASQGQAFWDALMEAGKEFGVMPYGTEC 854
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR G + + T+ P D + +S K Y+G+ SR + R +
Sbjct: 855 LHILRAEKGFIMIGDE-TDGTVIPQDLGLHW--ALSKKKEDYLGKRAHSRSHMADPERWK 911
Query: 204 PMII-TGTDDLPPSGSPILTDDIE-------IGTLGVVVGK----KALAIARIDK 246
+ T + P G+ + + + IG + + +A+ I
Sbjct: 912 LAGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLERGIAMGLIKH 966
>gi|307946990|ref|ZP_07662325.1| glycine cleavage T protein [Roseibium sp. TrichSKD4]
gi|307770654|gb|EFO29880.1| glycine cleavage T protein [Roseibium sp. TrichSKD4]
Length = 789
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 89/296 (30%), Gaps = 62/296 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62
+V G A +Q +T ++ L +A+ G ++ + ++ E
Sbjct: 464 EVVGPDAEELMQLCVTRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 523
Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPIN 98
L+ D+ ++ + L S + IE P
Sbjct: 524 TSGLWLQEQALKRNMNVWVRNSTDQLHNIAVQGRNSREIL-SKIFWTPPQQPTIEELPWF 582
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DI 141
+ ++ + S + R + L + + H +
Sbjct: 583 RLTVA--RVGDVQGKSVVISRTGYSGELGYEIFCHPNDAVEVFDHVWEVGQEYGVAPLGL 640
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LRI G++ ++F T P +A + + +IG+ + + +
Sbjct: 641 AALDMLRIEGGLIFAGSEFDDQTD-PFEAGIGFTVPLKSKPDDFIGRAAIE--ERKTHPH 697
Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIK 252
++ + P G + ++G + + K +A+ R+ V A+
Sbjct: 698 RKLVGFEIEGGTVPLPGDCVRVGKAQVGEITSAIKSPMLGKVIALGRVSPVHAALD 753
>gi|227503236|ref|ZP_03933285.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
accolens ATCC 49725]
gi|227076297|gb|EEI14260.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
accolens ATCC 49725]
Length = 370
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 79/317 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL + I+ + +L A+ S I G I+ + + EE+
Sbjct: 51 LSHMGEIWVNGPDAGKFLSYSFISN-LDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110
F++ + D++ D+L R+ +V ++ + + +++
Sbjct: 110 FLVVPNAGNADTVWDELNK---RAEGFDVELKNESRDVAMIAVQGPKAAEILVPLVEDNK 166
Query: 111 -----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD--- 140
+ + I R + W K ++
Sbjct: 167 QEAVYELGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGAEYDI 226
Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LR+ G+ + I P +A M + + ++G EV
Sbjct: 227 KPCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMSR--AFAKKEADFVGAEV------ 277
Query: 197 RNIIRKRP-----MIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIAR 243
IRKR ++I+G +G+ + +D ++GT+ L AIA
Sbjct: 278 ---IRKRAEEGPQVVISGLTSDQRRAARAGAEVFLNDTKVGTVTSGQPSPTLGHPVAIAL 334
Query: 244 IDKVDHAIKKGMALTVH 260
+D ++ G A+ V
Sbjct: 335 LD-TSAELEPGTAVEVE 350
>gi|167041555|gb|ABZ06303.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_008G09]
Length = 998
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 54/327 (16%), Positives = 109/327 (33%), Gaps = 69/327 (21%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ I + G FL + T L LP AR +L G + ++I E+
Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRMYTNAWLKLPIGKARYGVMLREDGIVFDDGTTTRISEN 721
Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHT-----FSN 112
+ + ++ +++ L +Y +L NV+ + G ++ + F N
Sbjct: 722 HYHMTTTTAQAPTVLSHLEYYLQVVWPELNVNVVSTTEQWAGAAIAGPKSRELLSKLFPN 781
Query: 113 SSFIDERFSIADVLLHRTWGHNEKI---------------ASDIKTYHE----------- 146
+E + +G +I AS+ T+
Sbjct: 782 KDISNEGLPFMGYMEADLFGIPARIFRISFSGELAYEINVASNFGTFMWEKTIEQGQQFN 841
Query: 147 -----------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
LRI G V L P+D ++ G+ K ++G+ ++R+
Sbjct: 842 IQPYGTEALSNLRIEMGHVAGPE--LDGRTIPYDVSLE---GLVNKKKDFVGKRSLNRVA 896
Query: 196 HRNIIRKRPMIITGTD--DLPPSGSPILTDDI------EIGTLGVVVGKK------ALAI 241
R++ + + D + P GS ++ D ++G + ALAI
Sbjct: 897 FTLSTRQKVVGLVPIDKKTVIPEGSYLVKDAKAKLPNPKLGHISSSCWSVEYNNPFALAI 956
Query: 242 ARIDK--VDHAIKKGMALTVHGVRVKA 266
+ K + + L + V+
Sbjct: 957 LQDGKNMIGEKLYAFSPLQNKTIPVEI 983
>gi|312112826|ref|YP_004010422.1| glycine cleavage system protein T [Rhodomicrobium vannielii ATCC
17100]
gi|311217955|gb|ADP69323.1| glycine cleavage system T protein [Rhodomicrobium vannielii ATCC
17100]
Length = 383
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 84/271 (30%), Gaps = 46/271 (16%)
Query: 7 SNQSFIKVCGKS----AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ ++ G A F + ++ D+ L R + +L +G I+ + ++ +
Sbjct: 64 SHMGQARIAGPDFATVAAAF-ERLVPGDIAGLKPGQIRYTQLLNDEGGIIDDLMATREAD 122
Query: 63 DT-FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH------------- 108
T L ++ S+++ + + S V + +V E
Sbjct: 123 GTGLFLVVNASRKEVDFAHIAAHLPPS-VTLAPLADRSLVALQGPEAARVLKRQMPEAGG 181
Query: 109 -TFSNSSFIDERFS----------------------IADVLLHRTWGHNEKIASDIKTYH 145
F ++ +D R + A+ H E +
Sbjct: 182 LAFMTAAPLDWRGTAVFVSRSGYTGEDGFEISVPADAAEAFARSLLAHPEVAPIGLGARD 241
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRP 204
LR+ G+ D T P +A ++ G + G +IG E V R R R
Sbjct: 242 TLRLEAGLPLYGQDM-DETTSPIEAALEFSIGKRRRRDGGFIGAERVQRELAEGPARVRV 300
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVV 234
+ + I ++ +G +
Sbjct: 301 GLRLEGRSAARTHMKIASETGETMGEITSGA 331
>gi|329297010|ref|ZP_08254346.1| glycine cleavage system aminomethyltransferase T [Plautia stali
symbiont]
Length = 365
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A + +L ++ ++ + ED F
Sbjct: 50 SHMTIVDLHGARTHEFLRYLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMSEDFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--IDERFSIA 123
L ++ + R+ + + + V + + ++ +R ++A
Sbjct: 110 RLVVNSATREKDLTWIAEHAQPFGVALTERDDLALIAVQGPNAQQKAQGLFSAAQRDAVA 169
Query: 124 DV 125
+
Sbjct: 170 GM 171
>gi|114767319|ref|ZP_01446142.1| probable aminomethyltransferase protein [Pelagibaca bermudensis
HTCC2601]
gi|114540572|gb|EAU43646.1| probable aminomethyltransferase protein [Roseovarius sp. HTCC2601]
Length = 787
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 96/298 (32%), Gaps = 64/298 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A L +T ++ L +A+ G ++ + ++ E F
Sbjct: 453 LSPLRKFEVTGPDAETLLNHCVTRNMEKLAVGQVVYTAVCATHGGMIDDGTVFRLGEHNF 512
Query: 66 ILE--IDRS---KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--------TFSN 112
D S R+ ++L L ++V + V L T +
Sbjct: 513 RWIGGCDGSGMFMREE-AERL---GLDAHVRSSTDQLCNVALQGRHAQTILSQLFWTAPD 568
Query: 113 SSFIDE----RFSIA------------------DVLLHRTWGHNEKIAS----------- 139
S IDE RF++A L + + H +
Sbjct: 569 RSSIDELGWFRFTVARLGDFQGTPVMISRTGYTGELGYEIFCHPKDAGEVFEAIWEAGQP 628
Query: 140 ------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ LRI G+ +F T P +A + + + + G+ +
Sbjct: 629 YGLKPLGLAALDMLRIESGLAFAGHEFDDQTD-PFEAGIGFTVPLKSKQADFSGR--AAL 685
Query: 194 IQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246
+ + +++ + + +P G + +++G + K +A+AR+D
Sbjct: 686 EERKAHPQRKLVGLEIDATTVPAHGDCVRLGRVQVGVVTSGTRSPTLGKTIALARLDA 743
>gi|302144120|emb|CBI23225.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++
Sbjct: 29 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVK 88
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
++ L ++ ++ L
Sbjct: 89 DNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 148
Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + +I ING + E F S + +A +L ++ G
Sbjct: 149 KEDL-SKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 207
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D + P +A + G +G ++G EV+ +
Sbjct: 208 RLTG--LGARDSLRLEAGLCLYGNDME-QHVTPVEAGLTWAIGKRRRAEGGFLGAEVILK 264
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+R + + S S I D IG +
Sbjct: 265 QLEEGPSVRRVGFFS-SGPPARSHSEIQDDKGNNIGEITS 303
>gi|2498933|sp|Q46337|SOXA_CORS1 RecName: Full=Sarcosine oxidase subunit alpha; Short=Sarcosine
oxidase subunit
gi|2127435|pir||I40889 sarcosine oxidase (EC 1.5.3.1) alpha chain [validated] -
Corynebacterium sp
gi|927591|gb|AAC43461.1| sarcosine oxidase alpha subunit [Corynebacterium sp.]
Length = 967
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 87/288 (30%), Gaps = 63/288 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A FL I T L +AR + G + + ++ ED F++
Sbjct: 637 IEIRGADAAEFLNRIYTNGYTKLKVGMARYGVMCKADGMVFDDGVTLRLAEDRFLMHTTT 696
Query: 72 SKRDSLIDKL-------------------------------LFYKLRSNVI-IEIQPING 99
++D L + V +++
Sbjct: 697 GGAAGVLDWLEEWLQTEWPELDVTCTSVTEQLATVAVVGPRSRDVVAKLVTGLDVSNDAF 756
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWG---HNEKIASDI--------------K 142
+S+ S R S + L + H ++ D+ +
Sbjct: 757 KFMSFQDVTLDSGIEARISRISFSGELAYEIAIPSWHGLRVWEDVYAAGQEFNITPYGTE 816
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
T H LR G + D T+ P DA M+ + +S K ++G+ SR + RK
Sbjct: 817 TMHVLRAEKGFIIVGQD-TDGTVTPQDAGMEWV--VSKLKD-FVGKRSFSREDNLREDRK 872
Query: 203 RPMIITGTDDL--PPSGSPILTDDIE--------IGTLGVVVGKKALA 240
+ + D G+ ++ D G + AL
Sbjct: 873 HLVSVLPVDTALRLAEGAALVADGAVETEGCTPMEGWVTSSYNSPALG 920
>gi|307129418|ref|YP_003881434.1| aminomethyltransferase [Dickeya dadantii 3937]
gi|306526947|gb|ADM96877.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Dickeya dadantii
3937]
Length = 366
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A +A+LTP ++ ++ ED F
Sbjct: 50 SHMTIVDLRGVRVREFLRYLLANDVAKLTQPGKALYTAMLTPSAGVIDDLIVYFQTEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH 108
L ++ + R+ + ++ + + V I + ++ +
Sbjct: 110 RLVVNSATREKDLAWIVEH---AKPFMVEITEREDLSLIAVQGPQA 152
>gi|297203890|ref|ZP_06921287.1| sarcosine oxidase alpha subunit [Streptomyces sviceus ATCC 29083]
gi|197713077|gb|EDY57111.1| sarcosine oxidase alpha subunit [Streptomyces sviceus ATCC 29083]
Length = 937
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 91/275 (33%), Gaps = 55/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A FL I T L R + P G I + +++++ +
Sbjct: 602 STLGKIEIWGADAGEFLNRIYTNAFKKLKPGTGRYGVMCKPDGMIFDDGVTLRLDDNRYF 661
Query: 67 LEIDRSKRDSLIDKLLFYKL---------------------------RSNV-----IIEI 94
+ +++D L + R+ V +++
Sbjct: 662 MTTTTGGAANVLDWLEEWSQTEWPELDVRCTSVTEQWATIAVVGPQSRAVVGHLAPDLDL 721
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDI-------- 141
+++ + S R S + L + +G D
Sbjct: 722 SNEAFPFMAFRETTLASGIPARVCRISFSGELAYEINVSAWYGLAVWEEVDAAGRPYGIT 781
Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G + D T+ P DA M + +S K +IG+ +R
Sbjct: 782 PYGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSWV--VSKQKD-FIGKRSFARADTA 837
Query: 198 NIIRKRPMIITGTDDL--PPSGSPILTDDIEIGTL 230
RK+ + + D P G+ ++ D+++GT+
Sbjct: 838 RTDRKQLVGLLPADRTTRLPEGTQLVAPDVDLGTV 872
>gi|114046132|ref|YP_736682.1| glycine cleavage system aminomethyltransferase T [Shewanella sp.
MR-7]
gi|123030919|sp|Q0HZ30|GCST_SHESR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|113887574|gb|ABI41625.1| glycine cleavage system T protein [Shewanella sp. MR-7]
Length = 364
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 56/165 (33%), Gaps = 3/165 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L I+ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F E+ + +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168
+ + Y E+ + + + L +
Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEVGYEIIVPETEAEALWQALLDQ 214
>gi|24372368|ref|NP_716410.1| glycine cleavage system aminomethyltransferase T [Shewanella
oneidensis MR-1]
gi|31340142|sp|Q8EIQ8|GCST_SHEON RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|24346323|gb|AAN53855.1|AE015522_10 glycine cleavage system T protein [Shewanella oneidensis MR-1]
Length = 364
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 55/165 (33%), Gaps = 3/165 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L I+ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F E+ + +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168
+ + Y E + + + L +
Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEAGYEIIVPETEAEALWQALLDQ 214
>gi|119963309|ref|YP_946292.1| N,N-dimethylglycine oxidase [Arthrobacter aurescens TC1]
gi|119950168|gb|ABM09079.1| putative N,N-dimethylglycine oxidase [Arthrobacter aurescens TC1]
Length = 830
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 88/272 (32%), Gaps = 53/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ LQ + T D+ + +L G + ++++ EDTF L +
Sbjct: 511 LEVSGPGALKLLQELTTGDLAK-KPGAVTYTLLLDEAGGVRSDITVARLSEDTFQLGANG 569
Query: 72 SKRDSLIDKLLFY-----------KLR--------------------SNVIIEIQPINGV 100
+ + ++ + ++R S V + +G+
Sbjct: 570 NMDTAYFERAARHQTENGGAGDWVQVRDTTGGTCCIGLWGPLARDLISTVSSDDFSNDGL 629
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKT 143
++ T + R S L + + IA+
Sbjct: 630 KYFRAKKVTIGGVTVTAMRLSYVGELGWELYTSADNGQRLWDALWKAGQPFGVIAAGRAA 689
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQ-EVVSRIQHRNIIRK 202
+ LR+ G +D P++A + + +TK ++G+ + R + + R
Sbjct: 690 FSSLRLEKGYRSWGSDMTTEHD-PYEAGLGF--AVKMTKENFVGKAALEGRSEESSARRL 746
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + L P+ D +G +
Sbjct: 747 RCLTVDDGRSLVLGKEPVFYKDQAVGYVTSAA 778
>gi|67906602|gb|AAY82706.1| predicted glycine cleavage system T protein [uncultured bacterium]
Length = 302
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
I+V G A F +IT D + AR + +G +L ++ +I +D F
Sbjct: 137 IRVKGPDAEKFTDYVITRDATKISPMRARYVILCNYKGGVLNDPILLRISQDEFW 191
>gi|291615314|ref|YP_003525471.1| glycine cleavage system T protein [Sideroxydans lithotrophicus
ES-1]
gi|291585426|gb|ADE13084.1| glycine cleavage system T protein [Sideroxydans lithotrophicus
ES-1]
Length = 361
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ +V L A SA+L P G ++ ++ + E+ F
Sbjct: 52 SHMRVVDMKGAGVRQFLRYLLANNVDKLTMPGKALYSAMLRPDGHVIDDLIVYFMTEEWF 111
Query: 66 ILEIDRSKRDSLIDKLL 82
+ ++ D I +
Sbjct: 112 RIVVNAGTADKDIAWMK 128
>gi|71908081|ref|YP_285668.1| aminomethyltransferase [Dechloromonas aromatica RCB]
gi|123774347|sp|Q47D83|GCST_DECAR RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|71847702|gb|AAZ47198.1| aminomethyltransferase [Dechloromonas aromatica RCB]
Length = 363
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ V G FL ++ DV L A +A+L G ++ +I + + F + ++
Sbjct: 55 VDVVGADCRTFLSRLVANDVAKLKVSGKALYAAMLNEAGGVIDDLIIYFLTDTRFRIVVN 114
Query: 71 RSKRDSLIDKLLFYKLRSNV 90
+ + + + V
Sbjct: 115 AGTAEKDLAWMQ-----AKV 129
>gi|221067273|ref|ZP_03543378.1| glycine cleavage system T protein [Comamonas testosteroni KF-1]
gi|220712296|gb|EED67664.1| glycine cleavage system T protein [Comamonas testosteroni KF-1]
Length = 378
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A L++++ DV+ L R +L QG IL + ED F+
Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGQHKQRYGLLLNEQGGILDDLMFVNRGEDLFL 118
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + +++ I +
Sbjct: 119 I-VNGACKEADIAHIQ 133
>gi|259418976|ref|ZP_05742893.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B]
gi|259345198|gb|EEW57052.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B]
Length = 1011
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 680 VKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 739
Query: 74 RDSLIDKL 81
D + +
Sbjct: 740 ADRIHAHM 747
>gi|229496016|ref|ZP_04389740.1| glycine cleavage system T protein [Porphyromonas endodontalis ATCC
35406]
gi|229317108|gb|EEN83017.1| glycine cleavage system T protein [Porphyromonas endodontalis ATCC
35406]
Length = 362
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G +A+ FLQ + + D L + T +G I+ FL+ + EE+ +++ + +
Sbjct: 56 VKGPNALAFLQKVSSNDASKLAVGQVQYCCFPTEEGGIVDDFLLYRYEEEKYMMVPNAAN 115
Query: 74 RD 75
+
Sbjct: 116 VE 117
>gi|225021868|ref|ZP_03711060.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii
ATCC 33806]
gi|224945371|gb|EEG26580.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii
ATCC 33806]
Length = 369
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A FL A+I+ + + A+ S I+ G I+ + ++ E+
Sbjct: 51 LSHMGEIRVTGPDAGAFLDYALISH-LSIIKVGKAKYSMIVNEDGHIIDDLITYRLGENE 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
F++ + D++ + + +V + + + +++ + +
Sbjct: 110 FLVVPNAGNADTVFQAFVDRAAKFDVKLVNESTDTALIAVQGPNAEA 156
>gi|196001899|ref|XP_002110817.1| hypothetical protein TRIADDRAFT_54121 [Trichoplax adhaerens]
gi|190586768|gb|EDV26821.1| hypothetical protein TRIADDRAFT_54121 [Trichoplax adhaerens]
Length = 870
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 57/318 (17%), Positives = 101/318 (31%), Gaps = 78/318 (24%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIE 61
LS+ + V GK A F+ ++ LP S ++TP+G++ + + ++E
Sbjct: 554 LYDLSSYGKVTVKGKDAAKFISKVLAN---KLPEVGQVNVSHMITPKGRVYGEYEVLRLE 610
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRS--------NVIIEIQPINGVVLSWNQEHT---- 109
ED F L + + LR +V I L+ + +
Sbjct: 611 EDNFFLTCGAAA--------EKHHLRWLIENSAEYDVEINNVTEEWNCLAISGPKSREIL 662
Query: 110 --------FSNSSFIDE-----------------------------RFSIADVLLHRTWG 132
FS ++F + R S + L + W
Sbjct: 663 AKATGSSNFSEANFPNHTCQMVLINGVEVGAVAMSFTGQFGWEFYVRSSDMEALHNNLWE 722
Query: 133 HNEKIA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE 189
+ LR+ GI +F +T P +A ++ I TK +IG+E
Sbjct: 723 AGSEFDIGHVGSYALSNLRVKAGIRALGLEFSVNT-NPIEAGLE--KYIDFTKP-FIGKE 778
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG-------KKALAIA 242
V + + R+ + T D+ G+ + + + G A A
Sbjct: 779 AVLAEKLKEASRQLVFLNVDTFDVDAEGNESIWVNDAVQGYTTSGGFDYEAKKGIAFAYL 838
Query: 243 RIDKVDHAIKKGMALTVH 260
V A G +L V
Sbjct: 839 PPHLVKEA---GQSLQVD 853
>gi|24940586|gb|AAN65213.1|AF329398_3 sarcosine oxidase alpha subunit [Streptomyces roseochromogenes
subsp. oscitans]
Length = 962
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 87/295 (29%), Gaps = 65/295 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A FL I T L +AR + P G I + +++++ +
Sbjct: 625 STLGKIEIWGADAGEFLNRIYTNAFKKLKPGMARYGVMCKPDGMIFDDGVTLRLDDNRYF 684
Query: 67 LEIDRSKRDSLIDKLLFY---------------------------KLRSNV-----IIEI 94
+ ++D L + + R V +++
Sbjct: 685 MSTTTGGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWATIAVVGPRSREVVAQIAPQVDL 744
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKI 137
+++ + S R S + L ++
Sbjct: 745 SNDEFPFMAFRETTLASGVPARICRISFSGELAYEINVCAWYGLAVWEEVYAIGRPYGIT 804
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G + D T+ PHDA M + +S K +IG+ SR
Sbjct: 805 PYGTETMHVLRAEKGYIIVGQD-TDGTVTPHDAGMSWV--VSKQKD-FIGKRSFSRTDTS 860
Query: 198 NIIRK---------RPMIITGTDDLPPSGSPILTDDIEI---GTLGVVVGKKALA 240
RK R + L G PI + + G + AL
Sbjct: 861 RTGRKQLVGLLPADRTTRLPEGTQLVAPGVPITPESGPVPMLGHVTSSYHSPALG 915
>gi|50286351|ref|XP_445604.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524909|emb|CAG58515.1| unnamed protein product [Candida glabrata]
Length = 391
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A L ++ D LP S +L G ++ +I+K +++ + + +
Sbjct: 69 RLTGAEATKLLHSVTPTDFANLPQGTGSLSVLLNEHGGVVDDTIITKEQDNQYYIVTNAG 128
Query: 73 KRDSLIDKLL 82
D + L
Sbjct: 129 CVDRDTEFLK 138
>gi|86133346|ref|ZP_01051928.1| glycine cleavage system T protein [Polaribacter sp. MED152]
gi|85820209|gb|EAQ41356.1| glycine cleavage system T protein [Polaribacter sp. MED152]
Length = 361
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 48/317 (15%), Positives = 98/317 (30%), Gaps = 55/317 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G++A+ +Q + + D L A+ S + I+ + +I+ED ++
Sbjct: 49 SHMGEFLVSGENALALIQKVTSNDASKLEIGDAQYSCFPNTENGIVDDLICYRIKEDQYL 108
Query: 67 LEIDRSKRDSLIDKLLFY------KLRS-------------------------------- 88
L ++ S + + + Y LR
Sbjct: 109 LVVNASNIEKDWNWISKYNEEFGADLRDLSDDYSLLAIQGPKAVEAMQSLSSLDLADIPF 168
Query: 89 -NVII-EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI---ASDIKT 143
+ + I V++S T S I + S + + +R + + +
Sbjct: 169 YKFKVGDFAGIEHVIISATGY-TGSGGFEIYCKNSEVEQIWNRVFLAGAEFGIKPIGLAA 227
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G D T P +A + + TK ++ E +++ + RK
Sbjct: 228 RDTLRLEMGYCLYGNDI-DDTTSPIEAGLGWI--TKFTKD-FVNSEALAKQKEEKPSRKL 283
Query: 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMA 256
I +P G I+ D +IG + L + +
Sbjct: 284 VAFILNERGIPRQGYDIVDDEGAKIGNVTSGTMSPNLSKGIGLGYVPTASSKVGSQILIQ 343
Query: 257 LTVHGVRVKASFPHWYK 273
+ + +YK
Sbjct: 344 IRKKAIPATVVKLPFYK 360
>gi|297180197|gb|ADI16418.1| glycine cleavage system t protein (aminomethyltransferase)
[uncultured bacterium HF770_09N20]
Length = 766
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A +Q ++T +V L SAI P G +L + ++ D F
Sbjct: 436 LSPLRKFEVLGPDAEALMQHVLTRNVRRLAIGQVVYSAICYPHGGMLDDGTLLRLGPDNF 495
>gi|87300399|gb|ABD37386.1| GcvT [Shigella dysenteriae]
Length = 138
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKTLYSGMLNASGGVIDDLIVYYFTEDFF 108
Query: 66 ILEIDRSKRDSLIDKLLFY 84
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQH 127
>gi|255640227|gb|ACU20404.1| unknown [Glycine max]
Length = 407
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK ++PFL+ ++ ADV L + +G + +I+K++
Sbjct: 79 SLFDVSHMCGLSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVK 138
Query: 62 EDTFILEIDRSKRDSLIDKL 81
+D L ++ RD + +
Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158
>gi|254784590|ref|YP_003072018.1| glycine cleavage system aminomethyltransferase T [Teredinibacter
turnerae T7901]
gi|259647496|sp|C5BM95|GCST_TERTT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|237685380|gb|ACR12644.1| glycine cleavage system T protein [Teredinibacter turnerae T7901]
Length = 363
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 91/302 (30%), Gaps = 41/302 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS-KIEEDT 64
S+ + + + G A FL+ ++ DV L A + +L G ++ ++ +
Sbjct: 50 SHMTVVDIQGTGARDFLRYLLANDVDRLKLPGKALYTGMLNESGGVIDDLIVYLMVNGYR 109
Query: 65 FILEIDRSKRD-------------SLIDK--LLFYKL-----RSNVIIEIQPINGVVLSW 104
++ ++D ++I++ L + R V I L
Sbjct: 110 LVVNCATREKDLAWINSQAEAYDVTVIERPELAMIAVQGPLARGKVHDLIGAAVLEELKI 169
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----------------HELR 148
Q S + D + + + ++ + LR
Sbjct: 170 FQGVPLSGEGYADWFVARTGYTGEDGYEIILPAEAAVQLWQDLARIGVTPCGLGARDTLR 229
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G+ + T P A M + +IG+E ++ + I K ++
Sbjct: 230 LEAGMNLYGHEMDDDTS-PLVANMAWTVAWEPAERNFIGREALTAEKSAGISHKLVGLVY 288
Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRVKA 266
+ + + ++ +G + L + +V + V +++
Sbjct: 289 TGKGVLRAEQEVTAPGVDGVGVITSGTFSPTLGYSIALARVPVGFTDQAVVNVRNRQLEV 348
Query: 267 SF 268
Sbjct: 349 KI 350
>gi|222086091|ref|YP_002544623.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
gi|221723539|gb|ACM26695.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
Length = 356
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 90/302 (29%), Gaps = 56/302 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ S +++
Sbjct: 49 EDAALALESLVPIDILGLAEGRQRYGFFTDDNGGILDDLMITHM-DDYLFVVVNASCKEA 107
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L +I +Q V + + F+D R
Sbjct: 108 DLKHLQDHIGDTCEVTLLDRALIALQGPRAVAVLAELWADLAYMKFMDVRHCRLHDVSCL 167
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A+ + R H + + LR+ G+ D
Sbjct: 168 VSRSGYSGEDGFEISVPADKAEDIAKRLLEHPDVQPIGLGARDSLRLEAGLCLYGNDI-D 226
Query: 163 STIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T P +A ++ G+ G + G + R+R + + P
Sbjct: 227 QTTTPVEAALEWGMQKARKTGGV--RAGGFPGSTRILAELDNGASRRR-VGLKPEGKAPV 283
Query: 216 SG-SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
G + + D EIG + V A+ + + + V
Sbjct: 284 RGHAKLYADAGGKTEIGEVTSGGFGPSVESPVAMGYVPVSFAAPGTPIFAEVRGKYLPVT 343
Query: 266 AS 267
+
Sbjct: 344 VA 345
>gi|145351666|ref|XP_001420189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580422|gb|ABO98482.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 414
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 92/268 (34%), Gaps = 50/268 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V GK A FL++++ AD+ L S + +G I+ +I+K+ + F + ++
Sbjct: 94 SVRGKDATAFLESLVVADLKGLKDGTGTLSVMTNEKGGIIDDTVITKVNSNDFYVVLNAG 153
Query: 73 KRD---------------------------------------SLIDKLLFYKLRSNVIIE 93
+ S++ +L + L S +
Sbjct: 154 CAEKDQAHINAALAKAKAKGMDVEFVVHSDRSLLAFQGPKTMSVLQRLTDFDL-SKLYFG 212
Query: 94 IQPINGVVLS--WNQEHTFSNSSFIDERFSIADV--LLHRTWGHNEKIASDIKTYHELRI 149
+ + + W ++ + AD L R E + + LR+
Sbjct: 213 MFTSMKINGADCWVTRTGYTGEDGFEISVPNADAMKLAERLESEKEVRMAALGPRDSLRL 272
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI--QHRNIIRKRP-M 205
G+ D I P +A + G + + C + G E++ + + I ++R +
Sbjct: 273 EAGLCLYGNDL-NEDITPPEAGLAWTIGKARRELCDFTGGEIIKKQLEDPKAIPQRRVGL 331
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGV 232
TG S IL TD +IG +
Sbjct: 332 TFTGKGAPARQHSLILDTDGNQIGEVTS 359
>gi|302542341|ref|ZP_07294683.1| glycine cleavage system T protein [Streptomyces hygroscopicus ATCC
53653]
gi|302459959|gb|EFL23052.1| glycine cleavage system T protein [Streptomyces himastatinicus ATCC
53653]
Length = 375
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G A L A++ + L AR + I +G IL ++ ++ E
Sbjct: 55 LSHMGEIALTGPQAADALDHALV-GHLSALAVGRARYTMICDSEGGILDDLIVYRLAEQE 113
Query: 65 FILEIDRSKRDSLIDKLL 82
+++ + S ++D L
Sbjct: 114 YLVVANASNAQVVLDALT 131
>gi|119504737|ref|ZP_01626815.1| sarcosine dehydrogenase [marine gamma proteobacterium HTCC2080]
gi|119459342|gb|EAW40439.1| sarcosine dehydrogenase [marine gamma proteobacterium HTCC2080]
Length = 863
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 18/184 (9%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTL----PYKIARGSAILTPQGKILLYFLISK 59
+ LS+ + V G A L+ + V L P + L G + I +
Sbjct: 518 INLSHFAIFDVVGADAEALLEYLS---VAKLGTNTPIGKGVYTHFLDHTGGVRSDLTIVR 574
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI----IEIQPINGVVLSWNQEHTFSNSSF 115
+ ED F + + ++ + + I+ + W E +
Sbjct: 575 LAEDAFRVICGGDTGYRDYVWMKKFRGKLGLTNVEFIDQSEQLATLGLWGPEARSTLQKL 634
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+D+ S++ T E +K + RI++ + + + FP + L
Sbjct: 635 MDDPDSVSGEAFPYT-MTREIDVLGVKVW-AFRISY-VGEQGWEL----YFPFADGLKLW 687
Query: 176 NGIS 179
+ ++
Sbjct: 688 DALA 691
>gi|299532151|ref|ZP_07045545.1| glycine cleavage system T protein [Comamonas testosteroni S44]
gi|298719813|gb|EFI60776.1| glycine cleavage system T protein [Comamonas testosteroni S44]
Length = 378
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A L++++ DV+ L R +L QG IL + +D F+
Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNRGDDLFL 118
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ ++ + +++ I + ++ S + P ++ + + S I
Sbjct: 119 I-VNGACKEADIAHIQ-SRIASRCEVVPLPERALLALQGPQAVTALSRLI 166
>gi|85704597|ref|ZP_01035699.1| aminomethyl transferase family protein [Roseovarius sp. 217]
gi|85671005|gb|EAQ25864.1| aminomethyl transferase family protein [Roseovarius sp. 217]
Length = 380
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 53/318 (16%), Positives = 106/318 (33%), Gaps = 75/318 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A F+Q + D+ + + I +G IL ++ ++ E+ F + + D
Sbjct: 67 VEITGPDAARFVQMLTPRDLSKMAVGQCKYILITNAEGGILNDPILLRLAENHFWISLAD 126
Query: 71 RSKR----------------------------------------DSLIDKLLFYKLRSNV 90
+S++D L +Y LR
Sbjct: 127 SDILLWAQGVAVHSGLDVTIGEPDVSPLQLQGPKSGLIMQELFGESIMD-LKYYWLR--- 182
Query: 91 IIEIQPINGVVL--SWNQE-------HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
+E+ I +V W+ E ++ + ER A + GH I
Sbjct: 183 ELELDGIPLLVSRTGWSSELGYEIYLRDSAHGDALWERIMAAGMPFGLKPGHTSSI---- 238
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
RI G++ + D +T P++ +D L + + +IG+ + ++ R
Sbjct: 239 -----RRIEGGMLSYHADADINT-NPYELGLDRLVNLDIEAE-FIGKAALRGLRDAGPRR 291
Query: 202 KRPMIITGTDDLPPSGS---PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
K+ +I + L + I +G + V ALA+ + + +
Sbjct: 292 KQIGLIIDSAPLKEPNTTFWAINVAGTPVGKVTSAVYSPRLERNIALAMVAAEHANVGAE 351
Query: 253 KGMALTVHGVR-VKASFP 269
+ VR V P
Sbjct: 352 VEVVTGQGPVRAVMVERP 369
>gi|162148100|ref|YP_001602561.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786677|emb|CAP56260.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter
diazotrophicus PAl 5]
Length = 409
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 56/315 (17%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+ ++ AD+L+L R + + QG I+ ++S++
Sbjct: 86 SHMGQIRLRARSGRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSRVG 145
Query: 62 EDTFILEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
DT +L ++ + +D+ + + L +I +Q ++
Sbjct: 146 -DTLLLVVNAACKDADLAHITAALDDACIVESLPDRALIALQGPLAGAALARLAPASADM 204
Query: 114 SFID-ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHE 146
F+D F +A V + E +
Sbjct: 205 RFMDVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDS 264
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ +D P T P + ++ G + G +++ R
Sbjct: 265 LRLEAGLCLYGSDIGPDTT-PVEGALEWSIQKSRRAGGARAGGFPGADIILARIQDGAAR 323
Query: 202 KRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHAIK 252
+R I G+ + D +G + A+ I
Sbjct: 324 RRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGAPVAMGYVDIAHAATGTA 383
Query: 253 KGMALTVHGVRVKAS 267
L V V +
Sbjct: 384 LFAELRGKYVPVTVA 398
>gi|209550886|ref|YP_002282803.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536642|gb|ACI56577.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 816
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 88/317 (27%), Gaps = 57/317 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++ G+ A +L +IT V + +G+I+ + +EE+ F
Sbjct: 497 LPGFSRYRLQGEGARDWLLGLITGKVPK--PGRIGLAYFADDKGRIVTEMSVMALEENLF 554
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW---NQEHTFSNSSFIDE---- 118
L + + L + L + + + + + + D
Sbjct: 555 FLTTAATAQWHDFAWLQKH-LPKDASFTLDDVTDNLACQILSGPQSRAILAEVTDADLSK 613
Query: 119 ------------------RFSIADVLLHRTWGHNEKIAS-----------------DIKT 143
R S L + A+ ++
Sbjct: 614 PWLTHLSCQIAGRRLQLVRVSFVGELGWELHTEMDDTATVFDAVWAAGGKHGLKPFGMEA 673
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G D ++ + K + G+ ++R + + + ++
Sbjct: 674 LDSLRIEKGYRAWKGDLSTDYTM-LQGGLERF--VDWAKPDFKGKAALAREKQQGVTKRF 730
Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMA 256
+ + + P S + D +G V AL + R D + +
Sbjct: 731 VTLAVEAGECDAPYMSTLWRDGQLVGETTSGNWGYRVGKSVALGMLRSDLAVPGTELEVE 790
Query: 257 LTVH--GVRVKASFPHW 271
+ V+ P W
Sbjct: 791 IFGDRFKAVVQPDRPLW 807
>gi|327541818|gb|EGF28330.1| glycine cleavage system aminomethyltransferase T [Rhodopirellula
baltica WH47]
Length = 388
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 55/306 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63
S+ ++ G A FL ++T V + R + +G +L L+S E
Sbjct: 67 SHMGRLRFDGDHAAEFLDHVLTRRVTDMVPGQVRYGMVCNAEGGVLDDVLVSFLQTPSER 126
Query: 64 TF-ILEIDRSKRDSLIDKLLFY------KLRSN-----VIIEIQPINGVVLSWNQEHTFS 111
F +L ++ S R+ ++ + S+ +I IQ + +
Sbjct: 127 RFHLLVVNASNREKILKWFEPHLADFPTVTMSDRTELTAMIAIQGPMAIEVCKKLFSIDP 186
Query: 112 N-----SSFIDERFSIADVL-------------------LHRTW-------GHNEKIASD 140
+ ++FI ++F ++ HR W + +
Sbjct: 187 SRLKNYNAFITDQFKKPVIVSRTGYTGEDGLELIVRAEEAHRVWENVLLAGREAGFVPAG 246
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ G+ + TI P A + G +L +IG++ + + +
Sbjct: 247 LGARDTLRMEAGMPLYGHEL-DETIDPITAGLKF--GCNLKDRHFIGEDALRAVAEQGPT 303
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
R R ++ G +L D +IG + L A+A ID HA
Sbjct: 304 RCRIGLLPTGKRPAREGCDVLNADGEKIGQVTSGGPSPTLGVPIAMATID-AKHAKDPSF 362
Query: 256 ALTVHG 261
+ + G
Sbjct: 363 QIDIRG 368
>gi|294463461|gb|ADE77260.1| unknown [Picea sitchensis]
Length = 254
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK +PFL+ ++ ADV L + +G + +++K++
Sbjct: 21 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLSPGSGTLTVFTNEKGGAIDDSIVTKVK 80
Query: 62 EDTFILEIDRSKRDSLIDKL----LFYKLR 87
+D + ++ RD + + +K R
Sbjct: 81 DDHIYIVVNAGCRDKDLAHIESHMKAFKAR 110
>gi|55670453|pdb|1VLO|A Chain A, Crystal Structure Of Aminomethyltransferase (T Protein;
Tetrahydrofolate-Dependent) Of Glycine Cleavage System
(Np417381) From Escherichia Coli K12 At 1.70 A
Resolution
Length = 381
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S L G ++ ++ ED F
Sbjct: 62 SHXTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGXLNASGGVIDDLIVYYFTEDFF 121
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L ++ + R+ + + + + I ++ + ++
Sbjct: 122 RLVVNSATREKDLSWITQHAEPFGIEITVRDDLSXIAVQGPNAQAKAATL 171
>gi|114321723|ref|YP_743406.1| glycine cleavage system aminomethyltransferase T [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228117|gb|ABI57916.1| glycine cleavage system T protein [Alkalilimnicola ehrlichii
MLHE-1]
Length = 364
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 90/279 (32%), Gaps = 42/279 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP---YKIARGSAILTPQGKILLYFLISKIEED 63
S+ + + G+ A L+ I+ ADV L A +L G I+ ++ + +
Sbjct: 49 SHMAITDLEGQGARDALRLILAADVARLDEAAPGKALYGCLLNEAGGIIDDLIVFRRGAE 108
Query: 64 TFILEIDRSKRDSLIDKLLF----YKL----RSNVI------------IEIQPINGVVLS 103
+ + + + R S+ L + L R+++ IE P +
Sbjct: 109 RYRIVSNAATRGSVQRWLERLTAAFGLQPEARTDLAMIALQGPAAPSLIEQLPEAAAAVG 168
Query: 104 WNQEHTFSNSSFIDER----------FSIADVLLHRTWGHNEKIAS---DIKTYHELRIN 150
R + +TW H + + LR+
Sbjct: 169 LGAFEALDGERIFVSRTGYTGEDGFELILPGPRASQTWDHLVAAGARPCGLAARDSLRLE 228
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT 210
G+ D P T P + + + +IG+ + + R ++
Sbjct: 229 AGLNLNGQDMTPETT-PLECGLGWTVHWTPEDRDFIGRHPLEAQRREGAPWCRQGLVLRE 287
Query: 211 DDLPPSGSPIL-TDDIEIGTLGVV----VGKKALAIARI 244
+P G +L D IG + V ++ +A+AR+
Sbjct: 288 RGVPRHGHAVLDAADRVIGEVTSGGWSPVLQRGIALARV 326
>gi|42522271|ref|NP_967651.1| aminomethyltransferase [Bdellovibrio bacteriovorus HD100]
gi|59797772|sp|Q6MQ03|GCST_BDEBA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|39574802|emb|CAE78644.1| aminomethyltransferase [Bdellovibrio bacteriovorus HD100]
Length = 360
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++V G A+ L+ + T DV L A+ S + QG ++ ++ + +D+
Sbjct: 49 SHMGEVRVKGPKALETLEWLTTNDVSKLNDGEAQYSLLPNDQGGLVDDIIVYCLSKDSDY 108
Query: 67 LEI-DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
L + S +D + + +++ + + G + +
Sbjct: 109 LVCVNASNKDKDFAWMTKHNKGADIT-DESDLWGQIAIQGPKA 150
>gi|260463905|ref|ZP_05812101.1| glycine cleavage system T protein [Mesorhizobium opportunistum
WSM2075]
gi|259030280|gb|EEW31560.1| glycine cleavage system T protein [Mesorhizobium opportunistum
WSM2075]
Length = 366
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 37/261 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A+ L D L ++ S L G IL +I+++ + F+
Sbjct: 55 SHMKLFEVSGPQAVALLDRACPLDAGALEISQSKLSFFLNEAGGILDDLIITRLGDARFM 114
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
+ + + L L + ++P++ V L+ ++ S
Sbjct: 115 VVANAGNAVADEKHLR--DLAKDFDATVEPLDRVFLAIQGPEAWAVLSRAGIETGSLLFM 172
Query: 115 -FIDER-------------------FSIADV--LLHRTWGHNEKIASDIKTYHELRINHG 152
++ R + D L+ + + + LR+ G
Sbjct: 173 HGVEPRKSWFMSRSGYTGEDGFEIGLPVTDARDLVTKLLEDERVLWIGLAARDSLRLEAG 232
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D P T ALM + G +IG + + R +KR +
Sbjct: 233 LCLHGQDITPETDPAAAALMWAIPKEIRATGAFIGADALRAAVERGPTQKRVGLKPEGRQ 292
Query: 213 LPPSGSPIL-TDDIEIGTLGV 232
+G+ + D G +
Sbjct: 293 PVRAGAALFDADGNPAGHVTS 313
>gi|85702849|ref|ZP_01033953.1| putative aminomethyltransferase protein [Roseovarius sp. 217]
gi|85671777|gb|EAQ26634.1| putative aminomethyltransferase protein [Roseovarius sp. 217]
Length = 789
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G + Q + T D+ LP +A+ P G ++ + ++ +D F
Sbjct: 459 LSALRKFEITGPDSEALCQYVFTRDIKKLPVGGVVYTAMCYPHGGMIDDGTVFRLGQDNF 518
>gi|108800275|ref|YP_640472.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp.
MCS]
gi|119869403|ref|YP_939355.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp.
KMS]
gi|108770694|gb|ABG09416.1| aminomethyltransferase [Mycobacterium sp. MCS]
gi|119695492|gb|ABL92565.1| aminomethyltransferase [Mycobacterium sp. KMS]
Length = 364
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 60/303 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A ++ + +T D+ + A+ + G ++ + + +D
Sbjct: 52 SHLGKALVRGPGAAAYVNSALTNDLNRIGPGKAQYTLCCNDSGGVIDDLIAYYVSDDEIF 111
Query: 67 LE---------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHT 109
L + RS ++ +Q V+
Sbjct: 112 LVPNAANTAAVVAALAERAPDGVTVTDEH------RSYAVLAVQGPKSAEVLGGLGLPTD 165
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------------- 146
++D + V + RT E+ + + +
Sbjct: 166 MDYMGYVDAELNGTAVRVCRTGYTGEQGYELLPAWDDAPAVFDALVSAVRDAAGELAGLG 225
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR- 201
LR G + P I P A + K + G++ + + R
Sbjct: 226 ARDTLRTEMGYPLHGHELSPE-ISPLQARCGW--AVGWRKDAFWGRDALLAEKEAGPKRL 282
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
R + G L P + + D +G K +A+A +D H I G +
Sbjct: 283 LRGLRAVGRGVLRPDLT-VFDGDTAVGVTTSGTFSPSLKVGIALALVDTA-HDIADGSRV 340
Query: 258 TVH 260
V
Sbjct: 341 EVD 343
>gi|332526792|ref|ZP_08402894.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2]
gi|332111195|gb|EGJ11227.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2]
Length = 379
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 56/314 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT-- 64
S+ +++ G A L+ ++ DV+ L R + G +L +IS+ T
Sbjct: 57 SHMGQVRLSGADAAAALETLVPVDVVDLAVGRQRYAFFTNEHGGLLDDLMISRPAPGTGF 116
Query: 65 --FILEIDRSKRDSLIDKLLF---YK-----LRSNVIIEIQ-------------PINGVV 101
L ++ +D+ + L ++ L ++ +Q + +V
Sbjct: 117 GDLFLVVNAGCKDADLRHLQTNIGHRCTVVGLPERALLALQGPLAADALARLNPGVKDLV 176
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------------ASDIKTYHEL 147
+++ R E+ + + L
Sbjct: 177 FMTGGVFELADAPCFVTRSGYTGEDGFEISVPAERAEALASALLALPEVKPAGLGARDTL 236
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQHRNII 200
R+ G+ D +T P +A + G +G Y G + R +
Sbjct: 237 RLEAGLCLYGHDIDANTS-PVEAGLSWAIQKVRRPGGA--REGGYPGTAAIERHLAGGAL 293
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGV------VVGKKALAIARIDKVDHAIKK 253
RKR ++ G+ I+ +G + V A+A D +
Sbjct: 294 RKRVGLVGLERVPVREGTAIVDAHGHALGRVTSGTLAPGVDRPIAMAYLPRDHAAPEHEV 353
Query: 254 GMALTVHGVRVKAS 267
+ + ++ +
Sbjct: 354 YAEVRGKRLPMRVT 367
>gi|227504649|ref|ZP_03934698.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
striatum ATCC 6940]
gi|227198759|gb|EEI78807.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
striatum ATCC 6940]
Length = 370
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 102/304 (33%), Gaps = 53/304 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G+ A FL +D+ L A+ S I G I+ + +++E F
Sbjct: 51 LSHMGEIWVNGEDAAKFLSYSFISDLTNLKVGKAKYSMICAEDGGIIDDLITYRLDETKF 110
Query: 66 ILEIDRSKRD----SLIDKLLFYKL------RSNVIIEIQ-PINGVVLSWNQEHTFSNSS 114
++ + D +L ++ + + R +I +Q P +L E T +
Sbjct: 111 LVVPNAGNADVVWEALNERAEGFDVDLNNESRDVAMIAVQGPKAAEILIPLVEDTKQEAV 170
Query: 115 FIDERFSIADVLLHRTWGHN------------------------EKIASDIKTYH----- 145
++ + R + +++ Y
Sbjct: 171 MELPYYAAMTGKVARKYAFICRTGYTGEDGFELIVYNSDAPELWQELLKAGAEYDIRPCG 230
Query: 146 -----ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ + I P +A M + + ++G +V+ +
Sbjct: 231 LAARDSLRLEAGMPLYGNELTRD-ITPVEAGMSR--AFAKKEQDFVGAKVLRQRAEEGPQ 287
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMA 256
+++ +GS + + ++GT+ L A+A ID ++ G A
Sbjct: 288 AVITGLVSSQRRAARAGSEVFVGENKVGTVTSGQPSPTLGHPVALALIDTAAG-LEPGAA 346
Query: 257 LTVH 260
+ V
Sbjct: 347 VEVD 350
>gi|170101120|ref|XP_001881777.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643132|gb|EDR07385.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 371
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 53/311 (17%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
G++A FL+ + + + L + S +L G I+ +I+K D F + + +R
Sbjct: 61 RGQTATEFLEWLTPSSLTALSPYTSTLSVLLNENGGIIDDTIITKHAPDAFYVVTNAGRR 120
Query: 75 DS----LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH---------------TFSNSSF 115
D KL + + V +E+ G++ TF S+F
Sbjct: 121 DVDLPWFTKKLEEWNAKGKVEMEVLEDWGLLALQGPAAATYLQALTSFDLRLLTFGKSAF 180
Query: 116 IDER---------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
+ V + + + + LR+ G+
Sbjct: 181 VPIEGFNLHVARGGYTGEDGFEISIPPSQTVEVAKLLSKTPVQLTGLGARDSLRLEAGMC 240
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D T P +A + + G + G +IG E V + R+R ++
Sbjct: 241 LYGHDL-DETTSPIEAGLSWVIGKDRKEAGDFIGAEGVRQHLKDGPPRRRVGLVVEGAPA 299
Query: 214 PPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKA--- 266
E+G + + +L A+ + H + + V R KA
Sbjct: 300 REGAKIFTPSGEELGIVTSGIPSPSLQKNIAMGYVKSGSHKKGTEVEVEVRNKRRKAVVT 359
Query: 267 ----SFPHWYK 273
P++++
Sbjct: 360 PMPFIKPNYWR 370
>gi|291333949|gb|ADD93627.1| probable sarcosine dehydrogenase protein [uncultured marine
bacterium MedDCM-OCT-S04-C448]
Length = 446
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 50/264 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ S ++ G A+ LQ + + + P + L +G I IS+ E+ F
Sbjct: 127 TSFSKFRISGPGALDLLQYLTVSKIDK-PIGKIIYTQFLNSRGGIEADLTISRTGEEEFY 185
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHT---------------- 109
+ + + + R V+I+ V++ H
Sbjct: 186 MVTGSAFGVHDRSWIQKHSPRDGSVVIDELTEEFGVINLCGPHARDVLQNVTDDDISNEN 245
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKTY-------- 144
SSF D R + V R E +A Y
Sbjct: 246 LPFSSFADIRVAGHPVRAMRIGYVGELGWEMHTGRENMPAVYRALAEAGSKYDIADVGYR 305
Query: 145 --HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ G + ++D P P +A + +++ KG +IG++ + I+ RK
Sbjct: 306 AIDSLRMEKGYLYWSSDISPD-YNPFEAGLGFR--VNMKKGDFIGRDALISIREM-EDRK 361
Query: 203 RPMIITGTDDLPPSGS-PILTDDI 225
+ T +P GS PI+ +
Sbjct: 362 KIAYFTLEKYMPVYGSEPIMREGR 385
>gi|157877272|ref|XP_001686963.1| aminomethyltransferase, mitochondrial precursor [Leishmania major
strain Friedlin]
gi|68130038|emb|CAJ09346.1| putative glycine synthase [Leishmania major strain Friedlin]
Length = 394
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G FL+ + D+ + + + QG I +++K+ D L ++
Sbjct: 61 EVRGADRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTKMA-DHLFLVLNAG 119
Query: 73 KRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFIDE--------- 118
++ + + LR +++ P++ +++ + S F+D+
Sbjct: 120 CKEKDVAHME-SVLRESAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPGMGFMQC 178
Query: 119 --------------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151
R N I + + LR+
Sbjct: 179 RQRVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMSRKAEMIGLGARDSLRLEA 238
Query: 152 GIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMII 207
G+ + I P A M +++ + +G +IG E + ++ + + + + +
Sbjct: 239 GLNLYGHELT-EDINPVAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGL 297
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263
T + + I +G + L AI +D+ + L V G R
Sbjct: 298 VSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRR 357
Query: 264 VKASF 268
V A
Sbjct: 358 VAAVV 362
>gi|260905974|ref|ZP_05914296.1| sarcosine oxidase alpha subunit [Brevibacterium linens BL2]
Length = 981
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 88/286 (30%), Gaps = 64/286 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAII-TADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S I++ G A FL I T L R + P G + + ++ +D +
Sbjct: 644 STLGKIEIRGTDAGAFL-GQIYTNGFAKLKVGKGRYGLMCKPDGMVFDDGVTLRVADDRY 702
Query: 66 ILEIDRSKRDSLIDKL---------LFYKLRSNVI-----------------------IE 93
+ ++++ L + ++V ++
Sbjct: 703 YMTTTTGGAATVLEWLEEWHQTEWPELDVVFTSVTEEWSTVAVAGPKSREVIAKLAPHLD 762
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY-- 144
+ + + + R S + L N E +A +
Sbjct: 763 VSNEAFEFMGFRETTLAGGIPARICRISFSGELAFEINVENFYGLAVWEAVAEAGAEFDI 822
Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
H LR G + D T+ P DA M+ + +S K +IG+ SRI
Sbjct: 823 TPYGTETMHVLRAEKGFIIVGQD-TDGTVTPQDAGMEWI--VSKLKD-FIGKRSYSRIDT 878
Query: 197 RNIIRKRP---MIITGTDDLPP------SGSPILTDDIEIGTLGVV 233
RK + + GT L SG+P+ + + +G V
Sbjct: 879 AREDRKHLVGVLPVDGTTRLAEGAQLITSGTPVTPEAGPVPMIGHV 924
>gi|254513007|ref|ZP_05125073.1| sarcosine oxidase alpha subunit [Rhodobacteraceae bacterium KLH11]
gi|221533006|gb|EEE36001.1| sarcosine oxidase alpha subunit [Rhodobacteraceae bacterium KLH11]
Length = 956
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 97/317 (30%), Gaps = 64/317 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G+ FL + + + +L R +L+ G IL + +++E +++
Sbjct: 632 ELKGRDVPKFLDFLYSNVMSSLKPGDGRYGLMLSDDGLILDDGVAFRLDEHRWLISTSTG 691
Query: 73 KRDSL---IDKLL-------------------------------FYKL------------ 86
D++ + KLL L
Sbjct: 692 HADAVNQHMKKLLQTEFPGWQVMITTVTSQWNNATICGPRARDVMQALGTDINLSPKAFP 751
Query: 87 ---RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
+ + P V +S+ E +F + ++ D ++ +
Sbjct: 752 FMSFRDGTVAGLPARVVRVSFTGELSFEVNVAPRHMATLWDKVMEAGEPFGILPVGSEAS 811
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
H LR+ G + + + T+ +D M +S K Y+G+ V + R+
Sbjct: 812 -HVLRVEKGFLSLGHE-VDGTVDAYDLGMGW--AMSQKKPDYLGKRSVQLRRQSGHPRRA 867
Query: 204 PMIITGTDD--LPPSGSPILTDDIEIGTLGVVVG---------KKALAIARIDKVDHAIK 252
+ + D P G+P+ T G++ LA+
Sbjct: 868 LVGVLPEDPNRQIPEGAPLTPGGRREATEGLITACVWSVMNDRWVGLALLENGHARQGET 927
Query: 253 KGMALTVHGVRVKASFP 269
+ L + V+ + P
Sbjct: 928 AHVRLKDGVIPVRVTKP 944
>gi|33862243|ref|NP_893804.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|59797840|sp|Q7TU18|GCST_PROMP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33634461|emb|CAE20146.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 370
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 94/305 (30%), Gaps = 52/305 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63
S+ I + G + ++Q ++ + + +L +G I+ +I + EED
Sbjct: 51 SHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLMLNEKGGIIDDLIIYDLGQQEED 110
Query: 64 --TFILEIDRSKRDSLIDKLL------------------FYKLRSNVIIEI------QPI 97
L ++ S+ + + + L+ ++ I
Sbjct: 111 ISEIFLIVNASRYQTDFSWIKNNLNTNNISISNAKKDKVLFALQGKNSFKLFEEWIKSSI 170
Query: 98 NGVVLSWNQEHTFSNSSFIDE-RFSIADVLLHRTWGHNEKIASDIKTY------------ 144
+ + + F + S ++ FS + I +
Sbjct: 171 SHIPYFGCEYKIFKHISSKEKIFFSKTGYTGENGLEILLSAKAAINLWDFLVSKNIKPCG 230
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D T P++A + L + + G+E + + I
Sbjct: 231 LGARDTLRLEAGMHLYGQDL-NETTTPYEAGLGWLVHLENNHD-FFGREFLEKQSRFGIN 288
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
+K + + G + D IGT+ KA+A A I + +
Sbjct: 289 KKLVGLNIEGRAIGRKGCEVFKDGENIGTITSGSWSPTKQKAIAFAYIQNSYATLNNVVE 348
Query: 257 LTVHG 261
+ + G
Sbjct: 349 ILIRG 353
>gi|113971661|ref|YP_735454.1| glycine cleavage system aminomethyltransferase T [Shewanella sp.
MR-4]
gi|123130080|sp|Q0HEX0|GCST_SHESM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|113886345|gb|ABI40397.1| glycine cleavage system T protein [Shewanella sp. MR-4]
Length = 364
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L I+ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + R+ + + +V + +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159
>gi|305681169|ref|ZP_07403976.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266]
gi|305659374|gb|EFM48874.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266]
Length = 369
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A FL A+I+ + + A+ S I+ G I+ + ++ E+
Sbjct: 51 LSHMGEIRVTGPDAGAFLDYALISH-LSIIKVGKAKYSMIVNEDGHIIDDLITYRLGENE 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
F++ + +++ + + +V + + + +++ + +
Sbjct: 110 FLVVPNAGNAETVFQAFVDRAAKFDVELVNESTDTALIAVQGPNAEA 156
>gi|104784072|ref|YP_610570.1| sarcosine oxidase (subunit alpha) oxidoreductase protein
[Pseudomonas entomophila L48]
gi|95113059|emb|CAK17787.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Pseudomonas entomophila L48]
Length = 1005
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 51/290 (17%), Positives = 88/290 (30%), Gaps = 57/290 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNV-IIEIQ 95
+ ++ L Y KL ++V I++
Sbjct: 731 MTTTTGGAARVLQWLELYHQTEWPDMKVYFTSVTDHWATMTLSGPNSRKLLADVSDIDLD 790
Query: 96 PINGVVLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144
+SW + SF E +V + G E+I K Y
Sbjct: 791 KEGFPFMSWKEGLVGGVPARVFRISFTGELSYEINVQANYAMGVLEQIVEAGKKYNLTPY 850
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
H LR G + D ++ P D M G + +IG ++R
Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMSWCVGRN-KPFSWIGLRGMNREDTVRE 908
Query: 200 IRKRPMIITGTDDLP--PSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 909 NRKQLVGLKPVDPNVWLPEGAQLVFDPKQPIPMDMVGHVTSSYAANSLGY 958
>gi|159028726|emb|CAO88198.1| gcvT [Microcystis aeruginosa PCC 7806]
Length = 368
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 92/310 (29%), Gaps = 45/310 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + + LQ ++ +++ L A+ S +L P+G I+ + E +
Sbjct: 58 SHMGKFILTGDNLVQSLQTLVPSNLARLKAGKAQYSVLLNPEGGIIDDIIFYYQSESQGV 117
Query: 67 LEIDRSKRDSLIDKL----------LFYKLRSNVIIEIQPINGV---------------V 101
L ++ S D + + L R V+I +Q +
Sbjct: 118 LIVNASTTDKDREWILGNLEGSGVKLKDLSRERVLIALQGPKAATILQPLIGEKLSDFGL 177
Query: 102 LSWNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
+ + F FI L + + + LR+
Sbjct: 178 FNHWESQLFGEKVFIARTGYTGEDGFEIMAPPEIGQQLWTEFLNLGVTPCGLGARDTLRL 237
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
+ D ST P +A ++ L + KG +IG+ V+ + + R +
Sbjct: 238 EAALALYGQDIDDSTS-PLEAGLNWLVHLP-EKGDFIGRNVLEDQKLNGVNRLLVGLQMS 295
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVR 263
+ P++ +G + ALA + +
Sbjct: 296 GKHIARHDYPVVFAGEVVGKVTSGTLSPTLNTAIALAYLPTPFASIGQAIEVEIRGSTYP 355
Query: 264 VKASFPHWYK 273
+YK
Sbjct: 356 ATVVKKPFYK 365
>gi|117921938|ref|YP_871130.1| glycine cleavage system aminomethyltransferase T [Shewanella sp.
ANA-3]
gi|166221571|sp|A0L105|GCST_SHESA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|117614270|gb|ABK49724.1| glycine cleavage system T protein [Shewanella sp. ANA-3]
Length = 364
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 56/165 (33%), Gaps = 3/165 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L I+ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-EHTFSNSSFIDERFSIAD 124
+ ++ + R+ + + +V + +P ++ + + F ++ + +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSADQNAAIE 169
Query: 125 VLLHRTWGHNEKIASDIKTYH-ELRINHGIVDPNTDFLPSTIFPH 168
+ + Y E+ + + + L +
Sbjct: 170 GMKPFFGKQAGSLFIATTGYTGEVGYEIIVPETEAEALWQALLDQ 214
>gi|325106087|ref|YP_004275741.1| glycine cleavage system T protein [Pedobacter saltans DSM 12145]
gi|324974935|gb|ADY53919.1| glycine cleavage system T protein [Pedobacter saltans DSM 12145]
Length = 360
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 92/301 (30%), Gaps = 50/301 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A+ +Q I D L + S G ++ L+ +I+E T++L ++ S
Sbjct: 56 LKGEKALDLIQKISANDASKLFDGKIQYSYFPNENGGVIDDLLVYRIDEKTYMLVVNASN 115
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD--------- 124
+ D + + +I+I ++ + +S D +
Sbjct: 116 IEKDWDWIQKHNTEGVELIDISDRTSLLAVQGPNAAKALASLTDIELENMEYYTFKKGVF 175
Query: 125 ---------VLLHRTWGHNE---KIASDIKTY--------------------HELRINHG 152
+ G E + LR+ G
Sbjct: 176 AGIPNVLISATGYTGAGGFEIYFDAVHSETIWDTIFEAGKPYGIQPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + TK ++ E + + + + RK
Sbjct: 236 FCLYGNDI-DETTCPIEAGLGWV--TKFTKD-FVNSESLKVRKEQGVERKLVGFEMVERG 291
Query: 213 LPPSGSPILTD-DIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+P G I+ + D IG + KA+ + + K + + + ++KA
Sbjct: 292 IPRHGYEIVDEHDQTIGVVTSGTQSPSLQKAIGLGYVSKAFAKADSDIYIKIRDKKIKAK 351
Query: 268 F 268
Sbjct: 352 V 352
>gi|3415128|gb|AAC31611.1| aminomethyltransferase [Bartonella grahamii]
Length = 189
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL D L +R + +L Q IL +I+++EE F+
Sbjct: 35 SHMKLIAVEGAQAVEFLSYAFPIDAAALKIGHSRYNYLLNGQAGILDDLIITRLEESRFM 94
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSWNQEH 108
L + + +L R+ V E Q + V+L+
Sbjct: 95 LVANAGNAQADFVELEK---RA-VDFECQVIALERVLLALQGPE 134
>gi|32474910|ref|NP_867904.1| aminotransferase-glycine cleavage system T protein [Rhodopirellula
baltica SH 1]
gi|32445450|emb|CAD75451.1| probable aminotransferase-glycine cleavage system T protein
[Rhodopirellula baltica SH 1]
Length = 388
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 55/306 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63
S+ ++ G A FL ++T V + R + +G +L L+S E
Sbjct: 67 SHMGRLRFDGDHAAEFLDHVLTRRVTDMVPGQVRYGMVCNAEGGVLDDVLVSFLQTPSER 126
Query: 64 TF-ILEIDRSKRDSLIDKLLFY------KLRSN-----VIIEIQPINGVVLSWNQEHTFS 111
F +L ++ S R+ ++ + S+ +I IQ + +
Sbjct: 127 RFHLLVVNASNREKILKWFEPHLADFPTVTMSDRTELTAMIAIQGPMAIEVCKKLFSIDP 186
Query: 112 N-----SSFIDERFSIADVL-------------------LHRTW-------GHNEKIASD 140
+ ++FI ++F ++ HR W + +
Sbjct: 187 SRLKNYNAFITDQFKKPVIVSRTGYTGEDGLELIVRAEEAHRVWENVLLAGREAGFVPAG 246
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ LR+ G+ + TI P A + G +L +IG++ + + +
Sbjct: 247 LGARDTLRMEAGMPLYGHEL-DETIDPITAGLKF--GCNLKDRHFIGEDALRAVAEQGPT 303
Query: 201 RKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
R R ++ G +L D +IG + L A+A ID HA
Sbjct: 304 RCRIGLLPTGKRPAREGCDVLNADGAKIGQVTSGGPSPTLGVPIAMATID-AKHAKDPSF 362
Query: 256 ALTVHG 261
+ + G
Sbjct: 363 QIDIRG 368
>gi|225444472|ref|XP_002272701.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 408
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK IPFL+ ++ ADV L + +G + +I+K++
Sbjct: 80 SLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVK 139
Query: 62 EDTFILEIDRS---------------------------------------KRDSLIDKLL 82
++ L ++ ++ L
Sbjct: 140 DNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDERSLLALQGPLAAPVLQHLT 199
Query: 83 FYKLRSNV---IIEIQPINGVV-----LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + +I ING + E F S + +A +L ++ G
Sbjct: 200 KEDL-SKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 258
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D + P +A + G +G ++G EV+ +
Sbjct: 259 RLTG--LGARDSLRLEAGLCLYGNDME-QHVTPVEAGLTWAIGKRRRAEGGFLGAEVILK 315
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+R + + S S I D IG +
Sbjct: 316 QLEEGPSVRRVGFFS-SGPPARSHSEIQDDKGNNIGEITS 354
>gi|149202465|ref|ZP_01879437.1| putative aminomethyltransferase protein [Roseovarius sp. TM1035]
gi|149143747|gb|EDM31781.1| putative aminomethyltransferase protein [Roseovarius sp. TM1035]
Length = 789
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G + Q + T D+ LP +A+ P G ++ + ++ +D F
Sbjct: 459 LSALRKFEITGPDSEALCQYVFTRDIKKLPVGGVVYTAMCYPHGGMIDDGTVFRLGQDNF 518
>gi|87300369|gb|ABD37371.1| GcvT [Shigella flexneri]
gi|87300371|gb|ABD37372.1| GcvT [Shigella flexneri]
gi|87300373|gb|ABD37373.1| GcvT [Shigella flexneri]
gi|87300377|gb|ABD37375.1| GcvT [Shigella flexneri]
Length = 138
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ ED F
Sbjct: 49 SHMTIVDLRGSRTWEFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFF 108
Query: 66 ILEIDRSKRDSLIDKLLFYK 85
L ++ + R+ + + +
Sbjct: 109 RLVVNSATREKDLSWITQHA 128
>gi|290955273|ref|YP_003486455.1| sarcosine oxidase subunit alpha [Streptomyces scabiei 87.22]
gi|260644799|emb|CBG67884.1| putative sarcosine oxidase alpha subunit [Streptomyces scabiei 87.22]
Length = 1071
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 87/291 (29%), Gaps = 60/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL + R + P G + + ++ +D ++
Sbjct: 737 STLGKIDVQGPDAGVFLDLLYTNMMSTLKVGMIRYGVMCRPDGMVFDDGTVIRVAQDRYL 796
Query: 67 LEIDRSKRDSLIDK-----------LLFY-----KLRSNVIIEIQPINGVVLSWNQEHTF 110
+ +++D L + + + V + V+ S E
Sbjct: 797 VTTTTGNAATVLDWMEEWLQTEWPELKVHCTSVTEQWATVALVGPKSREVIGSLAPELAV 856
Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
SN F I+ R + N + +
Sbjct: 857 SNEDFPFMAWRGTTVAGIEARVCRISFSGELAYEINVSPWEALTLWEALYEAGAPYGITP 916
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G D T+ P D M + +S K ++G+ +R
Sbjct: 917 YGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSWV--VSKKKSDFVGKRSYTRPDTVR 973
Query: 199 IIRKRPMIITGTD--DLPPSGSPILTDDI-------EIGTLGVVVGKKALA 240
RK + + D D P G+ ++ D + +G + AL
Sbjct: 974 PDRKHLVGLLPEDPGDFLPEGTHLVADSVLPAPPVPMLGHVTSSYRSAALG 1024
>gi|217072060|gb|ACJ84390.1| unknown [Medicago truncatula]
Length = 228
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK A+ FL+ ++ ADV L + +G + +I+K+ + L ++
Sbjct: 89 LSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDHHIYLVVNA 148
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 149 GCRDKDLAHI 158
>gi|114794036|pdb|2GAG|A Chain A, Heteroteterameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
gi|63146666|gb|AAY34152.1| heterotetrameric sarcosine oxidase alpha-subunit [Stenotrophomonas
maltophilia]
Length = 965
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ GK A FL I T L + R + G I + ++ ED F+L
Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFLLHTTT 694
Query: 72 SKRDSLIDKL 81
++D L
Sbjct: 695 GGAADVLDWL 704
>gi|284991323|ref|YP_003409877.1| glycine cleavage T protein (aminomethyl transferase)
[Geodermatophilus obscurus DSM 43160]
gi|284064568|gb|ADB75506.1| glycine cleavage T protein (aminomethyl transferase)
[Geodermatophilus obscurus DSM 43160]
Length = 821
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 52/268 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
++V G A+ LQ + T ++ + L G + ++++ E F
Sbjct: 509 LEVSGPGALALLQRLTTGEMDK-SVGAVTYALALDEAGGVRSDLTVARLGEQLFQVGANG 567
Query: 67 -LEIDRSKRDS---------------------------LIDKLL---------FYKLRSN 89
L+ D R++ L+ ++ Y R+
Sbjct: 568 PLDHDLLLREAPDDGSVQVRDVTGGTCCIGLWGPRARDLVQRVSADDFTNGGLKY-FRAK 626
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + LS+ E + + D + DVL R IA+ ++ LR
Sbjct: 627 RARIGGVPVTAMRLSYVGELGWEIYTSADNGQRLWDVL-WRAGQDLGVIAAGRAAFNSLR 685
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G D P++A + + K Y+GQE ++ + + + +R +T
Sbjct: 686 LEKGYRAWGHDMTTEHD-PYEAGLGF--AVRKQKQGYVGQEALA-GRSDDTVSRRLSCLT 741
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234
D + P+ D G +
Sbjct: 742 IDDGRSVVLGHEPVYVDGRPAGYVTSAA 769
>gi|126462115|ref|YP_001043229.1| sarcosine oxidase alpha subunit family protein [Rhodobacter
sphaeroides ATCC 17029]
gi|126103779|gb|ABN76457.1| sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides
ATCC 17029]
Length = 993
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP R + G ++ ++ ++ ED+++
Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95
D + + + + V I ++
Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139
+ W E T + R S + L + + +
Sbjct: 780 KEALPFMHWA-EGTLAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K +IG+ + R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895
Query: 199 IIRKRPMII-TGTDDLPPSGS 218
R + + + T + P G+
Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916
>gi|195578305|ref|XP_002079006.1| GD23726 [Drosophila simulans]
gi|194191015|gb|EDX04591.1| GD23726 [Drosophila simulans]
Length = 405
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 94/276 (34%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 141 MKEQDMGIIKAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
SSFI I +V + R E + +
Sbjct: 199 QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESSQAQKLTESLLESGVLKLAGLGA 258
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D S P +A + L ++ + + G +V+ R +
Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILRQLKEGVS 315
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I + ++G +
Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGKQVGQVTSGC 351
>gi|327395075|dbj|BAK12497.1| aminomethyltransferase GcvT [Pantoea ananatis AJ13355]
Length = 365
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ DV L A + +L ++ ++ ++E F
Sbjct: 50 SHMTIVDLKGERTREFLRFLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMDETFF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119
L ++ + R+ + + + V + E + + + Q + + F D +
Sbjct: 110 RLVVNSATREKDLAWIGEHAQGYGVALTERDDLALIAVQGPQAQQKAQTLFSDAQRQAVQ 169
Query: 120 -----------------------------FSIADVLL-HRTWGHNEKIASDIKTYHELRI 149
AD + + + + LR+
Sbjct: 170 GMKPFFGVQAGELFIATTGYTGEAGYEIALPAADAVGFWQRLLSAGVKPAGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG--CYIGQEVVSRIQHRNIIRKRPMII 207
G+ + ++ P A M IS G +IG+E + + + K +I
Sbjct: 230 EAGMNLYGQEM-DESVSPLAANMGWT--ISWEPGDRHFIGREALESQREKGT-EKLVGLI 285
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALT 258
+ +G P+ D + G L V +A+AR+ + +
Sbjct: 286 LTEKGVLRNGLPVRFTDQQ-GQLQQGVITSGSFSPTLGYSIALARV-PAGIGENAIVEIR 343
Query: 259 VHGVRVKASFP 269
+ VK + P
Sbjct: 344 NREMPVKVTKP 354
>gi|308178494|ref|YP_003917900.1| heterotetrameric sarcosine oxidase subunit alpha [Arthrobacter
arilaitensis Re117]
gi|307745957|emb|CBT76929.1| heterotetrameric sarcosine oxidase alpha-subunit [Arthrobacter
arilaitensis Re117]
Length = 965
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ GK A FL I T L + R + G I + ++ ED F+L
Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFLLHTTT 694
Query: 72 SKRDSLIDKL 81
++D L
Sbjct: 695 GGAADVLDWL 704
>gi|70919599|ref|XP_733451.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56505261|emb|CAH87045.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 205
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 160 FLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
F + P D D N IS KGCYIGQEV++R +++ +I K
Sbjct: 142 FNFKDLSPFDINYDKQNYISKDKGCYIGQEVINRTRNKLLINK 184
>gi|149059060|gb|EDM10067.1| dimethylglycine dehydrogenase precursor, isoform CRA_b [Rattus
norvegicus]
Length = 805
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 20/272 (7%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S
Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
F+L + + +R +EI+ I + ++
Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK- 182
+ + SDI +RI++ + N D P +A +D I L K
Sbjct: 643 SDDVFKFLQTKSLKISDIPV-TAIRISY--TEMNCD-----TNPLEAGLDYF--IKLNKP 692
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVG 235
+ G++ + +I+ + + R+ + TD++ P G+ + IG +
Sbjct: 693 ANFTGKQALKQIKAKGLKRRLVCLTLATDNVDPEGNESVWYKGKVIGNTTSGSYSYSIQK 752
Query: 236 KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
A A ++ + + + L
Sbjct: 753 SLAFAYVPVELSEVGQQVEVELLGKNYPATII 784
>gi|157877283|ref|XP_001686964.1| aminomethyltransferase, mitochondrial precursor [Leishmania major
strain Friedlin]
gi|68130039|emb|CAJ09347.1| putative glycine synthase [Leishmania major strain Friedlin]
Length = 377
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G FL+ + D+ + + + QG I +++K+ D L ++
Sbjct: 61 EVRGADRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTKMA-DHLFLVLNAG 119
Query: 73 KRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSN-SSFIDE--------- 118
++ + + LR +++ P++ +++ + S F+D+
Sbjct: 120 CKEKDVAHME-SVLRESAMKGADVQLVPLDRSLIALQGPQAAAILSEFMDDVPGMGFMQC 178
Query: 119 --------------RFSIADVLLHRTWGHNEKIAS-------------DIKTYHELRINH 151
R N I + + LR+
Sbjct: 179 RQRVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMSRKAEMIGLGARDSLRLEA 238
Query: 152 GIVDPNTDFLPSTIFPHDAL-MDLLNGISLTKGCYIGQEVVSRIQ---HRNIIRKRPMII 207
G+ + I P A M +++ + +G +IG E + ++ + + + + +
Sbjct: 239 GLNLYGHELT-EDINPVAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGL 297
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVR 263
T + + I +G + L AI +D+ + L V G R
Sbjct: 298 VSTGPVAREKTVIEVGGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRR 357
Query: 264 VKASF 268
V A
Sbjct: 358 VAAVV 362
>gi|114769737|ref|ZP_01447347.1| sarcosine dehydrogenase [alpha proteobacterium HTCC2255]
gi|114549442|gb|EAU52324.1| sarcosine dehydrogenase [alpha proteobacterium HTCC2255]
Length = 848
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN + ++ G+ A FL ++T ++ L + +L GK++ F I+K + F+
Sbjct: 490 SNFAKYEISGEDAEIFLDYLMTNNMPKL--GQIILTPMLNENGKLIGDFTIAKEANNKFL 547
Query: 67 L 67
L
Sbjct: 548 L 548
>gi|88856124|ref|ZP_01130785.1| aminomethyltransferase [marine actinobacterium PHSC20C1]
gi|88814692|gb|EAR24553.1| aminomethyltransferase [marine actinobacterium PHSC20C1]
Length = 385
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 44/317 (13%), Positives = 101/317 (31%), Gaps = 63/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + I V G A FL + + + A+ S +L G I+ + ++ +D F+
Sbjct: 67 SHMAEIHVRGADAGAFLDYALAGKLSGIALAQAKYSLLLNEAGGIIDDLVTYRLADDHFL 126
Query: 67 LEIDR----SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ---------------- 106
+ + + +L+++ + +V + + + +++
Sbjct: 127 VVANAGNRYAAASALMERASGF----DVAVTDESDDYALIAVQGPVSRAILETTAGLTDF 182
Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRTWGHNEK----------------- 136
TFS I R + H +
Sbjct: 183 ATPLDELKYYRETAATFSGHDLIIGRTGYTGEDGFELYIHVDAATELWAALTVAGEPLGL 242
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ + + LR+ G+ + T FP A + + +S +G ++G+ +
Sbjct: 243 VPAGLACRDTLRLEAGMPLYGHELNL-TTFPVQAGLGRVVALS-KEGDFVGRSAIEAGPD 300
Query: 197 RNIIRKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + + + D E+G + +A+A +D I
Sbjct: 301 AGA--RVLVGLAAEGRRAGRADYTLFSGDAEVGVITSGALSPTLGHPIAMAYVDPDVSEI 358
Query: 252 KKGMALTVHGVRVKASF 268
+ + V G R+ AS
Sbjct: 359 GTELHIDVRGSRIAASV 375
>gi|154247116|ref|YP_001418074.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
gi|154161201|gb|ABS68417.1| glycine cleavage T protein (aminomethyl transferase) [Xanthobacter
autotrophicus Py2]
Length = 376
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 98/302 (32%), Gaps = 50/302 (16%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
I V GK A+ FL ++TAD+ +P + ++I+ G ++ LI + F L
Sbjct: 61 IINVGGKDALAFLNQLVTADITKVPAGRSAIASIVGDDGGLIDDVLIYVDGDGAFRLSHG 120
Query: 71 RSKRDSLIDKLL--FYKLRS---NVII---------------EIQPINGVVLSWNQEHT- 109
+ + + F S +V I + G+ + T
Sbjct: 121 GGALEDALPLVAEGFDVTFSRDNDVHILSLQGPKALDILAPHTPMDLKGLPYFGHGRTTL 180
Query: 110 ------FSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + ER A L + + + ++ L I V+
Sbjct: 181 FGVPVSLARGGYSAERGYEVFCAAKDAVALWDKILEAGKPFGAMPVSWDCLDIVR--VEG 238
Query: 157 NT-----DFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D P + LMD + L+K + G+ + + + R +
Sbjct: 239 ALLFFPFDMPHKDTTPFEVLMDWS--VDLSKPDFRGK--AALLARKGTERTHQAGLEVLA 294
Query: 212 DLP-PSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G+ I D E+G + + +LA+ + A+ G+++ +A
Sbjct: 295 AKAITPGAKIFKDGEEVGVVNSTTYSRHLMKSLALVSLRPDVTALGTGVSVVDGEESFEA 354
Query: 267 SF 268
+
Sbjct: 355 NV 356
>gi|311742853|ref|ZP_07716661.1| glycine cleavage system T protein [Aeromicrobium marinum DSM 15272]
gi|311313533|gb|EFQ83442.1| glycine cleavage system T protein [Aeromicrobium marinum DSM 15272]
Length = 425
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 47/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ +T D+ + A+ + G + +
Sbjct: 112 SHLGKAVVRGTGAADFVNECLTNDLGRIGPGQAQYTLCCADDGGTVDDLIAYLRSPFEVF 171
Query: 67 LEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
L + + ++ +L ++ + + ++ + VV + + SF
Sbjct: 172 LIPNAANTAEVVARLRAEAPEGVEVVDQHRDFAVLAVQGTLSDEVVSALGLPTDHAYMSF 231
Query: 116 IDERFSIADVLLHRTWGHNEK-------IASDIKTYHE--------------------LR 148
D R + DV + RT E+ + + + LR
Sbjct: 232 ADARIAGHDVTVCRTGYTGERGYELVVPTDAAVDVWDAVLAAGRPHGIRACGLGARDTLR 291
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G + + I P A + +K + G+E + R + +R ++
Sbjct: 292 TEMGYPLHGHEL-SAEISPVMARAGW--AVGWSKPRFWGREALQRQREEKTVRTLRGLLA 348
Query: 209 GTDDLPPSGSPILTDDIE-IGTLGVVVGK----KALAIARIDK-VDHAIKKGMALTVHGV 262
+P G + D +G + + +A+A ++ V+ G+ +
Sbjct: 349 QGRGIPRPGMVVRNGDGAVVGEVTSGTFSPTLRQGVALALLEPGVEVGASVGVEVRTRQE 408
Query: 263 RVKASFPH 270
P
Sbjct: 409 PFTVVAPP 416
>gi|149277085|ref|ZP_01883227.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp.
BAL39]
gi|149231962|gb|EDM37339.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp.
BAL39]
Length = 359
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 99/301 (32%), Gaps = 50/301 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G++A+ +Q + + D L + S + G I+ L+ +I+E T++L ++ S
Sbjct: 56 LKGENALDLIQRVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRIDELTYMLVVNASN 115
Query: 74 RDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ + + Y L + +Q + V L+ + ++F+ +F
Sbjct: 116 IEKDWNWIQKYNDKGVEMHNISDKTSLLAIQGPKAAEALQSLTEVDLASMEYYSFTKGTF 175
Query: 116 IDERFSIADVLLHRTWGHNEKIASDIKT---YHE--------------------LRINHG 152
+ + G E + + LR+ G
Sbjct: 176 AGVGNVVISATGYTGAGGFEIYFDNEHANEIWEAIFAAGAALNIKPIGLGARDTLRLEMG 235
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D T P +A + + +K + E + + + RK
Sbjct: 236 FCLYGNDI-DDTTSPIEAGLGWI--TKFSK-VFTNSEALQAQKEAGVSRKLIGFEMIDRG 291
Query: 213 LPPSGSPIL-TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+P I+ + IG + +KA+ + IDK + + + R+KA
Sbjct: 292 IPRHDYEIVDAEGQVIGRVTSGTQAPSLQKAIGMGYIDKAFAKEGTEIFINIRNSRIKAK 351
Query: 268 F 268
Sbjct: 352 V 352
>gi|167648342|ref|YP_001686005.1| glycine cleavage system T protein [Caulobacter sp. K31]
gi|167350772|gb|ABZ73507.1| glycine cleavage system T protein [Caulobacter sp. K31]
Length = 370
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 90/264 (34%), Gaps = 40/264 (15%)
Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ ++ G + A F + +++AD L R + +L QG ++ + ++ ++D
Sbjct: 55 SHMGQARLRGANPAKSF-EKLVSADYQGLKPGKQRYAVLLNDQGGVIDDLMTARPDDDGL 113
Query: 66 ILEIDRSKRDS----LIDKL----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ ++ + +D+ + L +L ++ +Q + + F+D
Sbjct: 114 FIVVNGACKDNDYAIIAKALEGEATVERLEDRALLALQGPEAAAVLAAHVPEAAGMVFMD 173
Query: 118 ERFSIA--------------------------DVLLHRTWGHNEKIAS-DIKTYHELRIN 150
A + T +E++ + + LR+
Sbjct: 174 TAALTAFGTDAIISRSGYTGEDGYEISVPASEAARIWNTLLQDERVKAIGLGARDSLRLE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T+ P +A M G S + G + G + + ++ R R +
Sbjct: 234 AGLPLYGHDM-DETVSPIEAGMPFAVGKSRREAGDFPGAARILKELAGDLKRVRVNLKVL 292
Query: 210 TDDLPPSGSPILTD-DIEIGTLGV 232
G+ I + +G +
Sbjct: 293 EGAPAREGAEIADETGAVVGVVTS 316
>gi|209542714|ref|YP_002274943.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530391|gb|ACI50328.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 377
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 56/315 (17%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+ ++ AD+L+L R + + QG I+ ++S++
Sbjct: 54 SHMGQIRLRARSGRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSRVG 113
Query: 62 EDTFILEIDRSKRDSLIDKLL--------FYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
DT +L ++ + +D+ + + L +I +Q ++
Sbjct: 114 -DTLLLVVNAACKDADLAHITAALDDACIVESLPDRALIALQGPLAGAALARLAPASADM 172
Query: 114 SFID-ERFSIADV--------------------------LLHRTWGHNEKIASDIKTYHE 146
F+D F +A V + E +
Sbjct: 173 RFMDVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDS 232
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ +D P T P + ++ G + G +++ R
Sbjct: 233 LRLEAGLCLYGSDIGPDTT-PVEGALEWSIQKSRRAGGARAGGFPGADIILARIQDGAAR 291
Query: 202 KRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKVDHAIK 252
+R I G+ + D +G + A+ I
Sbjct: 292 RRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGAPVAMGYVDIAHAATGTA 351
Query: 253 KGMALTVHGVRVKAS 267
L V V +
Sbjct: 352 LFAELRGKYVPVTVA 366
>gi|284054077|ref|ZP_06384287.1| glycine cleavage system aminomethyltransferase T [Arthrospira
platensis str. Paraca]
gi|291572053|dbj|BAI94325.1| putative glycine cleavage T-protein [Arthrospira platensis NIES-39]
Length = 370
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 83/294 (28%), Gaps = 55/294 (18%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLIS------KIEEDTFILEIDRSKRDS----LIDK 80
+ L A+ + +L G IL + ++ ++ + + ++
Sbjct: 77 LSRLQPGQAQYTVLLNSSGGILDDVIFYYQGLDPATGNQRGMMIVNAATKSRDKAWVVAH 136
Query: 81 LLFYKL------RSNVIIEIQ--------------PINGVVLSWNQEHTFSNSSFIDERF 120
L + RS V+I +Q ++ V + E T R
Sbjct: 137 LEGTGVALEDLSRSQVLIAVQGPQAEAVLGPLVEADLSAVANFGHIETTLLGKPAFIART 196
Query: 121 -------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
V L R + LR+ + D T P
Sbjct: 197 GYTGEDGFEVMVNPHTGVNLFRHLIEVGATPCGLGARDTLRLEAAMALYGQDIDTHTT-P 255
Query: 168 HDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDI 225
+A + L I KG +IG+E + Q + +R + + + G P+
Sbjct: 256 LEAGLGWL--IHWDEKGDFIGRESL-ESQKSGGLSRRLVGLEMQGRYIARHGYPVKAGGE 312
Query: 226 EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+G + ALA ++ + + + +Y+
Sbjct: 313 VVGEITSGTMSPTLEKAIALAYVPVELAKIGRQVEVEIRNKIYPATVVKRPFYR 366
>gi|195161607|ref|XP_002021654.1| GL26626 [Drosophila persimilis]
gi|194103454|gb|EDW25497.1| GL26626 [Drosophila persimilis]
Length = 410
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 104/310 (33%), Gaps = 57/310 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK A L+++ TAD+L P + QG IL +++K+ E + + +
Sbjct: 87 VRGKDAAACLESVCTADILGTPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNAAM 146
Query: 74 RDS----LIDKLLFYKLR-SNVIIE-IQPINGVVLSWNQEHTFSN--------------- 112
+ + +K + +V +E + P + +++ +
Sbjct: 147 KQQDMNIISAAASSFKSQGRDVSVEFLTPSDQSLIAVQGPRVAAELAKLLAPTTALDQLY 206
Query: 113 --SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKTYHE 146
SF+ I +V + R GH + + +
Sbjct: 207 FMQSFVGTLAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDS 266
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ +D T P +A + L + G +VV Q + +++R +
Sbjct: 267 LRLEAGLCLYGSDIDAQTT-PVEAALAWLVAKRRRAARDFPGADVVL-SQLKGGVQRRRV 324
Query: 206 IITGTDDLPPS---GSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALT 258
+ PP G I + ++G + + +A+ + + A + L
Sbjct: 325 GLQMLGAKPPPARSGVAIFSGGQQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELK 384
Query: 259 VHGVRVKASF 268
V +A
Sbjct: 385 VRDKVYEAEI 394
>gi|217974770|ref|YP_002359521.1| glycine cleavage system aminomethyltransferase T [Shewanella
baltica OS223]
gi|254797880|sp|B8EB47|GCST_SHEB2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|217499905|gb|ACK48098.1| glycine cleavage system T protein [Shewanella baltica OS223]
Length = 364
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ ++ + R+ + + +V + +P ++ ++ +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160
>gi|87300433|gb|ABD37403.1| GcvT [Shigella dysenteriae]
Length = 138
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G FL+ ++ DV L A S +L G ++ ++ E+ F
Sbjct: 49 SHMTIVNLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTENFF 108
Query: 66 ILEIDRSKRD 75
L ++ + R+
Sbjct: 109 RLVVNSATRE 118
>gi|126172866|ref|YP_001049015.1| glycine cleavage system aminomethyltransferase T [Shewanella
baltica OS155]
gi|166221567|sp|A3D083|GCST_SHEB5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|125996071|gb|ABN60146.1| glycine cleavage system T protein [Shewanella baltica OS155]
Length = 364
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ ++ + R+ + + +V + +P ++ ++ +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160
>gi|240851020|ref|YP_002972420.1| glycine cleavage system protein T [Bartonella grahamii as4aup]
gi|240268143|gb|ACS51731.1| glycine cleavage system protein T [Bartonella grahamii as4aup]
Length = 370
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 58/305 (19%), Positives = 98/305 (32%), Gaps = 49/305 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL D L +R + +L Q IL +I+++EE F+
Sbjct: 59 SHMKLIAVEGTQAVEFLSYAFPIDAAALKIGHSRYNYLLNEQAGILDDLIITRLEESRFM 118
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ--PINGVVLSW-------------------- 104
L + + +L R+ V E Q + V+L+
Sbjct: 119 LVANAGNAQADFVELEK---RA-VDFECQVIALERVLLALQGPEAAAVLADADLPGNELF 174
Query: 105 -------NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150
Q+ + S + E + + EK SD + LR+
Sbjct: 175 FMQGFEPQQDWFITRSGYTGEDGFEIALPIGHAHMLAEKFLSDSRVEWIGLAARDSLRLE 234
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D P T P DA + S+ K + G + + R R +
Sbjct: 235 AGLCLHGNDITPDTT-PIDAALTWAVPKSVREKAQFYGAKAFLEALQKGPARCRVGLKPQ 293
Query: 210 TDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGV 262
T +G+ +L D EIG + G A+ +D + L +
Sbjct: 294 TRQPIRAGAVLLDDQGNEIGVVTSGGFGPSFDGPVAMGYVPVDCKVEGTQVFTELRGKKI 353
Query: 263 RVKAS 267
+
Sbjct: 354 VLSVH 358
>gi|330845252|ref|XP_003294508.1| aminomethyltransferase [Dictyostelium purpureum]
gi|325075021|gb|EGC28969.1| aminomethyltransferase [Dictyostelium purpureum]
Length = 404
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 102/284 (35%), Gaps = 58/284 (20%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ ++ GK + F ++I+ AD+ +L ++ S T G I+ +I+
Sbjct: 73 SLFDVSHMGQLRFHGKDRVKFFESIVVADLQSLAAGHSKLSVFTTENGGIIDDTMITNAG 132
Query: 62 EDTFILEIDRSKRDSLIDKL-LFYKLRS----NVIIEIQPINGVVL-------------- 102
D+ + ++ D I + KL +V +E+ ++
Sbjct: 133 -DSLYVVVNAGCADKDIAHINQQMKLFKEKGNDVSMELLEDLSLIAIQGPATEVILQKMV 191
Query: 103 ---------------------------SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
+ E F S ++ +A++LL + ++E
Sbjct: 192 KQDITNMEFMTQRVMNIAGIDCIVTRCGYTGEDGFEISVPSNKAVQLAEILLSTSNANSE 251
Query: 136 K--IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEV 190
+ + LR+ G+ D I P +A ++ L IS + G + G
Sbjct: 252 HGIKPAGLGARDSLRLEAGLCLYGHDL-NDQISPIEASLNWL--ISKRRREEGGFPGASK 308
Query: 191 VSRIQHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232
+ + + +KR +I GS IL +++ EIG +
Sbjct: 309 IQQQLKDGVSQKRVGLIV-EGSPAREGSLILDPSNNQEIGRVTS 351
>gi|289806992|ref|ZP_06537621.1| putative global regulator [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 49
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADV 31
++ + L + + + G + ++Q +TADV
Sbjct: 19 LTLIALDDWALSSITGVDSEKYIQGQVTADV 49
>gi|126737928|ref|ZP_01753658.1| sarcosine oxidase alpha subunit [Roseobacter sp. SK209-2-6]
gi|126721321|gb|EBA18025.1| sarcosine oxidase alpha subunit [Roseobacter sp. SK209-2-6]
Length = 990
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 69/213 (32%), Gaps = 19/213 (8%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
+ +S+ I V G A FL I + L AR +L G ++ ++
Sbjct: 650 LGICDVSSLGKIAVQGPDASEFLNRIYSNAFAKLAVGKARYGIMLRDDGMVMDDGTTWRL 709
Query: 61 EEDTFILEIDRSKRDSLIDKL-LFYKLRS-----NVIIEIQPINGVVLSWNQEHTFSNSS 114
E+ F+L + ++ L +LR +V GV ++ + +
Sbjct: 710 SENDFLLTTTTTGAGKVMVWLEELLQLRWPELEVHVTSVSDQWAGVSVAGPKSRAAIAAC 769
Query: 115 FIDER------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV----DPNTDFLPST 164
D V R + + + I EL + + D L +
Sbjct: 770 LTDPEMISAESLPFMGVRETRLKSGIKCLIARISFSGELAYELYVPANQGEAMMDLLWAA 829
Query: 165 IFPHD---ALMDLLNGISLTKGCYIGQEVVSRI 194
P ++ L + + KG G E+ R+
Sbjct: 830 SEPLGGCLYGLEALGTLRIEKGHVTGAELDGRV 862
>gi|187251759|ref|YP_001876241.1| glycine cleavage system T protein [Elusimicrobium minutum Pei191]
gi|186971919|gb|ACC98904.1| Glycine cleavage system T protein [Elusimicrobium minutum Pei191]
Length = 371
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 42/263 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G+ FL+ + + + + +L +G ++ + EE F+
Sbjct: 67 SHMGQLLMTGRDVHKFLEYVTSNKIKN-SPSQGTYTHVLNEKGGVVDDVVAFCKEEGKFL 125
Query: 67 LEIDRSKRDSLIDKL-LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-----ERF 120
+ ++ + V+ ++ G+V E + RF
Sbjct: 126 VVVNSATTHKDFKYFSKMTAGFDVVVEDLSSEFGMVAVQGPEAMSHAEKLVPGISELPRF 185
Query: 121 SIADV-------LLHRTWGHNE---------KIASDIKTY--------------HELRIN 150
+I +V L+ RT E K DI + LR+
Sbjct: 186 NIKEVVLFGQRCLITRTGYTGEDGLEIMAPHKAIVDIWNFFIDLGAAPCGLGARDVLRLE 245
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-IRKRPMIITG 209
G + D + + + L K ++ + ++++ + + I+ +TG
Sbjct: 246 AGYLLYGVDVDDEHTSYEASCGWV---VKLDKPDFVAKAILAKQKEEGVKIKLTSFQLTG 302
Query: 210 TDDLPPSGSPILTDDIEIGTLGV 232
+P + EIG+L
Sbjct: 303 PG-VPREHCKVFFKGEEIGSLTS 324
>gi|307822834|ref|ZP_07653065.1| glycine cleavage system T protein [Methylobacter tundripaludum
SV96]
gi|307736438|gb|EFO07284.1| glycine cleavage system T protein [Methylobacter tundripaludum
SV96]
Length = 360
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 102/294 (34%), Gaps = 46/294 (15%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A+P L +I +D+ L + + + G I+ +I++I + ++ ++ + +D
Sbjct: 60 GDDAVPELGQLIPSDISGLKSGDQKYTVLTNSDGGIMDDIIITRI-DTGLMIVVNAACKD 118
Query: 76 SLIDKL--------LFYKLRSNVIIEIQPINGV-----VLSWNQEHTF------------ 110
L F +L S + +Q + E +F
Sbjct: 119 KDFKHLYSHLGGRCCFNELTSQALFALQGPAAASIMEKFSAQAAELSFMQACGTNIKGIK 178
Query: 111 ---SNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
S S + E A+ L ++ + LR+ G+ +
Sbjct: 179 CNVSRSGYTGEDGFEISVGHHYAEQLARLLLAEDDVEPIGLAARDTLRLEAGLCLYGHEL 238
Query: 161 LPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITGTDDLPPSGSP 219
+I P +A + L I + G E +++++QH + R ++ + GS
Sbjct: 239 -NESITPVEAGLQWL--IKKADNNFPGAEKILAQLQH-GSEKIRVGLLIDSKIPVREGSV 294
Query: 220 I-LTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268
I ++ I +G + L A+A +D + + V R+ +
Sbjct: 295 ICNSEGIAVGYVTSGSFSPCLDQPIAMAMLDPYTVDLGSPLYTMVRDHRITVTL 348
>gi|160876905|ref|YP_001556221.1| glycine cleavage system aminomethyltransferase T [Shewanella
baltica OS195]
gi|189039319|sp|A9L332|GCST_SHEB9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|160862427|gb|ABX50961.1| glycine cleavage system T protein [Shewanella baltica OS195]
gi|315269109|gb|ADT95962.1| glycine cleavage system T protein [Shewanella baltica OS678]
Length = 364
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ ++ + R+ + + +V + +P ++ ++ +
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVL 160
>gi|82701348|ref|YP_410914.1| glycine cleavage system aminomethyltransferase T [Nitrosospira
multiformis ATCC 25196]
gi|82409413|gb|ABB73522.1| aminomethyltransferase [Nitrosospira multiformis ATCC 25196]
Length = 360
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G+SA FL+ ++ ++ L A S +L P G ++ +I + E F
Sbjct: 49 SHMLAVDIEGESARAFLRQLVANNIDKLTQLGKALYSCMLNPDGGVIDDLIIYFLTESHF 108
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 109 RMVVNAGTAD 118
>gi|294083805|ref|YP_003550562.1| aminomethyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663377|gb|ADE38478.1| aminomethyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 377
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 88/308 (28%), Gaps = 57/308 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A + +T D+ L + + +L +GK + +I ++ ++F++
Sbjct: 59 VHVAGPHASHVIDRAVTRDIEKLRPGRSTYACMLNDEGKFIDDCVIYRMGPNSFMVVHGS 118
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------------- 117
+ ++L +V + + ++D
Sbjct: 119 GQG---HEQLTMAATGRDVSLRFDDNLHDISLQGPLAVEFLDKYVDSIRQLNYFNHTQTM 175
Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD---PNTDFLPSTIF 166
R + + + + T GI+ D L + +
Sbjct: 176 LFDCPVMISRTGYSGERGYELFCRGQDAPKIWDTLVTEGAAMGIIPTRFTTLDLLRAESY 235
Query: 167 PHDALMDLLN----------------GISLT----KGCYIGQEVVSRIQHRNIIRKRPMI 206
D + G+ T K + G E ++ + R +
Sbjct: 236 LLFFPYDNSDMYPFENEKHGDTLWELGLDFTVSPGKTGFRGCE--EHMRLKGKERFKIYG 293
Query: 207 ITGTDDLPP-SGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV 259
+ P G+P++ D ++G + V + +A +D + +
Sbjct: 294 VLLDGTEPADEGAPLMKDGKQVGIVTVGMYSTLNKHNVGIARMPVDCAVDGVAMSVKNAS 353
Query: 260 HGVRVKAS 267
+ +A
Sbjct: 354 GDIACQAH 361
>gi|324503230|gb|ADY41408.1| Dimethylglycine dehydrogenase [Ascaris suum]
Length = 833
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 60/324 (18%), Positives = 114/324 (35%), Gaps = 67/324 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + I+V G A FL I+T V L + +LT +G IL + ++
Sbjct: 499 IDLSWKGKIEVRGPDAEVFLDRILTNAVPPLAAITS--GLMLTRRGNILAPLKVFHHDQY 556
Query: 64 T--FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------- 106
FIL D + + + + +EI ++ + S
Sbjct: 557 RTNFILLTDPERESRDLYWIQRAADEMKMNVEISAVSEYLASLALVGPHSREVLQELTKS 616
Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHNEKI--------ASDIKTYHEL-------- 147
+ F + R S + RT ++ A +K Y+ +
Sbjct: 617 DVSDEGFPQRTTKLLRLSNVPAIAARTSTSTGQLSFEFFHNRADTLKLYNAIMNEGKNYG 676
Query: 148 ------------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
R+ HG + T P++ + L + L+K +IG+ V +
Sbjct: 677 VVNFGQATLNMMRLEHGFKLWGRELTLDT-NPYECGLGHL--VDLSKKNFIGKAAVLELS 733
Query: 196 HRNIIRKRPM----IITGTDD--LPPSGSPIL---TDDIEIGTLG----VVVGKKALAIA 242
H+ RK+ + + G D P G ++ + IG + V + LA A
Sbjct: 734 HKKWNRKQVLLTCDPLEGVQDWASVPKGMEVVRKQGAEERIGQITSGTYSVRLHRPLAYA 793
Query: 243 RIDKVDHAIKKGMALTVHGVRVKA 266
++ D ++ + + + G+R+ A
Sbjct: 794 WVN-ADISVNDALTVDIGGLRIGA 816
>gi|146302182|ref|YP_001196773.1| glycine cleavage system aminomethyltransferase T [Flavobacterium
johnsoniae UW101]
gi|146156600|gb|ABQ07454.1| aminomethyltransferase [Flavobacterium johnsoniae UW101]
Length = 369
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 19/150 (12%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + GK A+ +Q I + D L + S + G I+ LI + E ++
Sbjct: 56 SHMGEILIQGKDALALIQKISSNDASKLFPGKIQYSCMPNKTGGIVDDLLIYMMSEKDYL 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L ++ S + + + T +N S I ++ L
Sbjct: 116 LVVNASNIQ-----------------KDWDWISTIALDYLDLTITNLSDIISLLAVQGPL 158
Query: 127 LHRTWGHNEKIASDIKTYHELRIN--HGIV 154
++ I + Y+ I GI
Sbjct: 159 AAKSLQKLTSINLNEMKYYTFEIGEFAGIP 188
>gi|255727144|ref|XP_002548498.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis
MYA-3404]
gi|240134422|gb|EER33977.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis
MYA-3404]
Length = 394
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ GK+A LQ I D+ TLP S +L +G ++ +I+K ED F + +
Sbjct: 72 KITGKNARKLLQKITPIDLDTLPVNTFSLSVLLNNEGGVIDDCIITKHGEDDFYMVTNAG 131
Query: 73 KRDSLIDKLL 82
RD I +
Sbjct: 132 CRDKDIKFIK 141
>gi|119504062|ref|ZP_01626143.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
gi|119460065|gb|EAW41159.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
Length = 805
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + +CG A FL ++ + IA + L+ G+IL ++++ +
Sbjct: 483 IDLTGFAKYDICGADAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 541
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120
F L S +D L ++ S V I GV+ + + D
Sbjct: 542 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 600
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ W ++ I LRIN+ + + + P AL D + G
Sbjct: 601 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 654
Query: 181 TKG 183
+G
Sbjct: 655 DQG 657
>gi|326521632|dbj|BAK00392.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 90/277 (32%), Gaps = 48/277 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+
Sbjct: 85 SLFDVSHMCGLSLQGRQAIPFLESLVVADVAALKDGTGSLTVFTNDKGGAIDDSVVTKVN 144
Query: 62 EDTFILEIDRSKRDSLIDKL--LFYKLRSN---VIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ L ++ RD + + + V + ++ +
Sbjct: 145 DHHVYLVVNAGCRDKDLAHIGAHMEAFQKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 204
Query: 117 DERFSIA-------------DVLLHRTWGHNE---------KIASDIK------------ 142
E S L RT E + A D+
Sbjct: 205 KEDLSKMYFSDFKMIDINGSACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVR 264
Query: 143 -----TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQH 196
LR+ G+ D I P +A + G +G ++G EV+ + Q
Sbjct: 265 LTGLGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGAEVILK-QL 322
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ + R + I P S S I++ IG +
Sbjct: 323 KEGPKIRRVGIFSQGPPPRSHSEIVSGAGENIGEVTS 359
>gi|170782567|ref|YP_001710900.1| glycine cleavage system T protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157136|emb|CAQ02316.1| glycine cleavage system T protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 399
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + I V G+ A FL +++ + + A+ + +L P G I+ ++ + E++F+
Sbjct: 59 SHMAEIAVEGEGAAAFLDSVLAGKLSAIAEWQAKYTLLLDPSGGIVDDLIVYRTGEESFL 118
Query: 67 LEIDRSKRDSLIDKL 81
+ + D +I L
Sbjct: 119 VVANAGNHDPVIAVL 133
>gi|77463241|ref|YP_352745.1| putative sarcosine oxidase, alpha subunit [Rhodobacter sphaeroides
2.4.1]
gi|77387659|gb|ABA78844.1| putative sarcosine oxidase, alpha subunit [Rhodobacter sphaeroides
2.4.1]
Length = 993
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP R + G ++ ++ ++ ED+++
Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95
D + + + + V I ++
Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139
+ W E T + R S + L + + +
Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K +IG+ + R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895
Query: 199 IIRKRPMII-TGTDDLPPSGS 218
R + + + T + P G+
Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916
>gi|332558119|ref|ZP_08412441.1| sarcosine oxidase alpha subunit family protein [Rhodobacter
sphaeroides WS8N]
gi|332275831|gb|EGJ21146.1| sarcosine oxidase alpha subunit family protein [Rhodobacter
sphaeroides WS8N]
Length = 993
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 53/261 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP R + G ++ ++ ++ ED+++
Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVGRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95
D + + + + V I ++
Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139
+ W E T + R S + L + + +
Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K +IG+ + R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895
Query: 199 IIRKRPMII-TGTDDLPPSGS 218
R + + + T + P G+
Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916
>gi|254422458|ref|ZP_05036176.1| glycine cleavage system T protein [Synechococcus sp. PCC 7335]
gi|196189947|gb|EDX84911.1| glycine cleavage system T protein [Synechococcus sp. PCC 7335]
Length = 376
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G+ I LQ ++ +D+ L A+ + +L QG I+ ++
Sbjct: 52 SHMGKFVLTGEDVIIHLQKLVPSDLSRLTSGKAQYTVLLNEQGGIIDDLIVYHQG----- 106
Query: 67 LEIDRSKRD-SLIDKLLFYKLRSNVII 92
E++ K + ++ + R V +
Sbjct: 107 -EVEEGKVEGAVGKR------REKVTL 126
Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-Y 185
L + + + LR+ + D ++ P +A + L + L K +
Sbjct: 223 LWQQLIEIAVVPCGLGARDTLRLEAAMALYGQDI-DNSTTPLEAGLSWL--VHLDKSSDF 279
Query: 186 IGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
IG+ V+ + + R+ + ++ PI+ + +GT+ L
Sbjct: 280 IGRSVLEKQKSTGPSRRLVGLTLAGRNIARHDYPIMHNATPVGTITSGTLSPTLGY 335
>gi|284991776|ref|YP_003410330.1| glycine cleavage system T protein [Geodermatophilus obscurus DSM
43160]
gi|284065021|gb|ADB75959.1| glycine cleavage system T protein [Geodermatophilus obscurus DSM
43160]
Length = 372
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 90/317 (28%), Gaps = 57/317 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQ-----GKILLYFLISKIE 61
S+ V G A F+ + +T D+ + A+ + P G ++ ++
Sbjct: 53 SHLGTATVRGPGAAAFVDSCLTNDLSRIGPGQAQYTMCCLPDGDPRAGGVVDDLIVYLHG 112
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI----- 116
D +L + + ++ +L + V + + VL+ + +F+
Sbjct: 113 PDDVLLVPNAANAAEVVARLAG-AAPAGVTVTDRHTEVAVLAVQGPRSPQLLAFLGLPGE 171
Query: 117 -----------------------------------DERFSIADVLLHRTWGHNEKIASDI 141
+R +L T +
Sbjct: 172 LPYMSFVTGVGGGSAEVTVCRSGYTGEHGYELLVAADRAGELWDVLVETGQDEGLRLCGL 231
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR G + P I P A + K + G+E + + R
Sbjct: 232 GARDTLRTEMGYPLHGHELSPE-ITPVQARAGW--AVGWRKPAFWGREALLAEREAGPAR 288
Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKK----ALAIARIDKVDH-AIKKGM 255
+ +P G +L D +G + +A+A +D A +
Sbjct: 289 LLWGLRAPGRGIPRPGMAVLDADGARVGEVTSGTFSPSLRTGIALALLDTASGVAEGSEL 348
Query: 256 ALTVHGVR--VKASFPH 270
A+ V G V+ P
Sbjct: 349 AVDVRGRPQTVQVVLPP 365
>gi|157414293|ref|YP_001485159.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9215]
gi|166989729|sp|A8G7J2|GCST_PROM2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157388868|gb|ABV51573.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9215]
Length = 370
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63
S+ I + G + ++Q + ++ + + +L +G I+ +I + E D
Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110
Query: 64 --TFILEIDRSKRDSLIDK----LLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109
+L ++ S+ + L ++ + V++ +Q N + W +
Sbjct: 111 LSELLLIVNASRYEEDFQWIKNNLNMSEISITNFKKDKVLLALQGKNSFDLFEEWIESSI 170
Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144
+F I + FS + I +
Sbjct: 171 SYIPTFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVTPCG 230
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D T P++A + L + + G+ + I
Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGIQ 288
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
+K + + G +L + IGT+ +A+A A I+ I +
Sbjct: 289 KKLVGLSIEGKAIGRKGCAVLKGEENIGTITSGSWSPTKQQAIAFAYINTTHALINNEVQ 348
Query: 257 LTVHG 261
+++ G
Sbjct: 349 ISIRG 353
>gi|221133460|ref|ZP_03559765.1| glycine cleavage system aminomethyltransferase T [Glaciecola sp.
HTCC2999]
Length = 359
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 98/310 (31%), Gaps = 55/310 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +L+ ++ DV L A S ++ G ++ ++ +E +
Sbjct: 50 SHMTIVDVKGVQAQAYLRYLLANDVAKLQDKGKALYSGMINEAGGVVDDLIVYFFDETNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
L ++ + ++ ++ L +V + + ++ A
Sbjct: 110 RLVVNSATKEKDLNWLNKQAQGFDVTVTERDEFAMIAVQGPNAKAQAGKLFSAAQQEAVA 169
Query: 126 LLHRTWGHNE----------------------KIASDIKTY--------------HELRI 149
+ +G A+D LR+
Sbjct: 170 GMKPFYGVQAEDLFIATTGYTGETGYEIMVPNAQAADFWQQLLDLGVAPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D TI P A M ++G++V+++ + K ++
Sbjct: 230 EAGMNLYGQDM-DETISPLAANMGWTISWEPENRNFVGRDVLTQQRAAGTD-KLVGLVMK 287
Query: 210 TDDLPPSGSPILTDDIEI----GTLGVVVGKKALAIARI-----DKVDHAIKKGMALTVH 260
+ +G + E GT +G ++A+AR+ D + ++K
Sbjct: 288 EKGVLRAGQKVTVAGGEGVITSGTFSPTLG-HSVALARVSNTVTDTAEVEMRKKW----- 341
Query: 261 GVRVKASFPH 270
V V+ P
Sbjct: 342 -VTVEVVKPS 350
>gi|322436672|ref|YP_004218884.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX9]
gi|321164399|gb|ADW70104.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX9]
Length = 381
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 47/324 (14%), Positives = 106/324 (32%), Gaps = 75/324 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G ++ +Q ++ D L A SA+L G + ++ K+ ++ ++
Sbjct: 56 SHMGDIQLRGPGSLAAVQRLLMNDASKLQTGQAHYSAMLYENGTFVDDVVLHKLSDNDYL 115
Query: 67 LEIDRS------------------------------------KRDSLIDKLLFYKLRSNV 90
+ I+ K ++ + KL
Sbjct: 116 IVINAGTREKDVQWVRKQIGAMPGVHINDFSDYYTQLAIQGPKAEATLQKLT-------- 167
Query: 91 IIEIQPINGVVLSWNQEHT-----FSNSSFIDER-----FSIADVLLHRTWGHNEKIASD 140
++ I +W Q + + + E + R WG ++
Sbjct: 168 TTDLSVIKNYWFAWGQVCGCHNVMIARTGYTGEDGFEIYIPSDEPTSSRVWGEVLDAGAE 227
Query: 141 -------IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVS 192
+ + LR+ + + TI +A + + KG ++G++ +S
Sbjct: 228 FGIIPCGLGARNTLRLESAMALYGHEI-SDTINVFEANLGRYCKMD--KGTDFVGRDALS 284
Query: 193 RIQHRNIIRKRPMIITGTD-DLPPSGSPILT-DDIEIGTLGVVV------GKKALAIARI 244
I+ +++ + + D + G P+ T +IG + ALA
Sbjct: 285 EIEFTGGPKRKLVGLEMIDRGIGRDGYPVFTVGGEKIGEITSGSPAPFLKKNIALAYVPT 344
Query: 245 DKVDHAIKKGMALTVHGVRVKASF 268
+ + +A+ + G VKA
Sbjct: 345 QYA--VVDEILAVEIRGALVKAKV 366
>gi|299138136|ref|ZP_07031316.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX8]
gi|298600066|gb|EFI56224.1| glycine cleavage system T protein [Acidobacterium sp. MP5ACTX8]
Length = 383
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 107/316 (33%), Gaps = 59/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I++ G +++ +Q ++ D L A SA+L P G + ++ K+ ++ ++
Sbjct: 57 SHMGDIQLRGPNSLAAVQKLLMNDASKLQTGQAHYSAMLYPNGTFVDDVVLHKLGDNDYL 116
Query: 67 LEIDRSKRDSLIDKLL-----FYKL----RS-----------NVIIEIQPINGV------ 100
+ I+ R+ + + + S +Q + GV
Sbjct: 117 IVINAGTREKDVQWVRQVIGGMSGVHVNDFSDYYTQLAIQGPKAAATLQKLTGVDLSTIK 176
Query: 101 --VLSWNQEHT-----FSNSSFIDER-----FSIADVLLHRTWGHNEKIASD-------I 141
+W Q + + + E + R WG + +
Sbjct: 177 NYWFTWGQVCGCHNVMIARTGYTGEDGFEIYIPSDEPTSARVWGEVLAAGEEFGIIPCGL 236
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNII 200
+ LR+ + + TI +A + L KG ++G+E + +Q+
Sbjct: 237 GARNTLRLESAMALYGHEI-SDTINVFEANLGRYC--KLDKGTDFVGREALLEVQNSGGP 293
Query: 201 RKRPMIITGTDDLPPSGSPILT--DDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
++ + + D ++ D +IG + ALA + + +
Sbjct: 294 SRKLVGLEMVDRGIGRDGYLVATLDGTKIGEITSGSPAPFLKKNIALAYVPVAYTE--LG 351
Query: 253 KGMALTVHGVRVKASF 268
+A+ + G VKA
Sbjct: 352 TELAVEIRGQLVKAQV 367
>gi|324997847|ref|ZP_08118959.1| FAD dependent oxidoreductase [Pseudonocardia sp. P1]
Length = 802
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V LS + ++V G A FLQ ++ +DV P + +L G +L ++++
Sbjct: 464 VDLSAERRVEVTGPHAAEFLQRLVCSDVDG-PAGHVVETLMLDADGGVLAAPTVARLGPQ 522
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQE 107
F++ + +RD + L Y R+ V I ++ + W
Sbjct: 523 RFLVVL-AERRD--VAALRRYA-RTGVEITDVSTTTACLGLWGPA 563
>gi|332224808|ref|XP_003261560.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Nomascus
leucogenys]
Length = 866
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 98/326 (30%), Gaps = 74/326 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS + G+ +I L + + + S +LTP+G++ +S
Sbjct: 532 TDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQSPG 589
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVIIE-IQPINGVVLSWNQEHT--- 109
F+L + LR +V I+ I GV+ +
Sbjct: 590 EFLLITGSGS--------ELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVL 641
Query: 110 --FSNSSFIDE--------------------RFSIADVLLHRTWGHNEKIAS-------- 139
++ D+ R S L + E +
Sbjct: 642 QKLTSEDLSDDVFKFLQTKFLKVSSIPVTATRISYTGELGWELYHRREDSLALYDAIMNA 701
Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189
+ TY + LR+ + T P +A ++ + L K +IG++
Sbjct: 702 GQEEGIDNFGTYAMNALRLEKAFRAWGLEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQ 758
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIA 242
+ +I+ + + R+ + TDD+ P G+ I + +G + A A
Sbjct: 759 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYV 818
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASF 268
++ + + + L
Sbjct: 819 PVELSEVGQQVEVELLGKNYPAVIIR 844
>gi|330970923|gb|EGH70989.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 1006
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 56/322 (17%), Positives = 98/322 (30%), Gaps = 71/322 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967
Query: 240 AIARI-DKVDHAIKKGMALTVH 260
+AR+ ++V + G +
Sbjct: 968 GLARMGERVFAPLADGSVIEAE 989
>gi|66047939|ref|YP_237780.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas
syringae pv. syringae B728a]
gi|63258646|gb|AAY39742.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas
syringae pv. syringae B728a]
Length = 1006
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 56/322 (17%), Positives = 98/322 (30%), Gaps = 71/322 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 RDAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967
Query: 240 AIARI-DKVDHAIKKGMALTVH 260
+AR+ ++V + G +
Sbjct: 968 GLARMGERVFAPLADGSVIEAE 989
>gi|322828503|gb|EFZ32270.1| glycine cleavage T-protein, putative [Trypanosoma cruzi]
Length = 373
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47
S+ F +V G F + + + V L + + +
Sbjct: 54 SHVGFFEVRGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSNYSDHLLA 113
Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86
+GKI+ + +++ + D ++E+DR S +++L K
Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173
Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
R +V ++ I S++ E F I + ++LL + + + +
Sbjct: 174 GRRSVRVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200
LR G+ + + I P A LM + + +G +IG E V R + +
Sbjct: 230 SLRTEAGLCLYSHEL-SEEINPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287
Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255
R R I++ + +G PIL D+ +G + V + +A+ ID+ + +
Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETV 347
Query: 256 ALTVHGVRV--KASFP 269
L V G R+ + + P
Sbjct: 348 ELEVRGKRLPGEVTLP 363
>gi|301614085|ref|XP_002936519.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 404
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 88/271 (32%), Gaps = 46/271 (16%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK IPF+++++ AD+ L S +G I+ +++ + + +
Sbjct: 89 KVLGKDRIPFMESLVVADIGELKENQGTLSLFTNEKGGIIDDLIVTNTSDGYLYVVSNAG 148
Query: 73 KRDS----LIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE--------- 118
+ +++KL +K +V +E + + + D+
Sbjct: 149 CAEKDSAHMLNKLQEFKAAGRDVDLEHIDCALLAVQGPLSARVLQAGMNDDLSKLPFMTS 208
Query: 119 ----RFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRIN 150
F I + R +++ + + LR+
Sbjct: 209 VYTAVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSLRLE 268
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P +A + G + G ++ Q + ++ + + +T
Sbjct: 269 AGLCLYGNDI-DETTSPVEASLVWTLGKRRRTAMDFPGASIIV-PQIKGKVKHKRVGLTS 326
Query: 210 TDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239
T +PIL + IG + +L
Sbjct: 327 TGPPVRQHAPILNQEGRIIGEVTSGCPSPSL 357
>gi|257069117|ref|YP_003155372.1| glycine cleavage system T protein (aminomethyltransferase)
[Brachybacterium faecium DSM 4810]
gi|256559935|gb|ACU85782.1| glycine cleavage system T protein (aminomethyltransferase)
[Brachybacterium faecium DSM 4810]
Length = 425
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 71/292 (24%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A F ++T D+ + + G IL ++ ++EE+ F L +
Sbjct: 69 IEISGPDAFDFTNLLVTRDLSKCAVGQCKYVFLTDQHGGILNDPILLRLEENRFWLSLAD 128
Query: 72 SK----RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------------- 106
S + +V IE + V + +
Sbjct: 129 SDILLWARGVATHAGM-----DVSIEEIDVGPVQVQGPKSYAVMRDLLGEAVADLRYYYL 183
Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY------------------HEL 147
+ T R + + + H+ ++ K + H
Sbjct: 184 HDFTLDGIDVTVSRTGYTGEIGYEIYVHDASQNAE-KLWQLVLEAGEPHGLRVIGPCHIR 242
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
RI G++ D T P + M + L + ++G++ + R++ R +
Sbjct: 243 RIEGGMLAHGADITVQTT-PFEVGMGYDWMVDLEQEADFVGKDALRRLKAEG---PRCKL 298
Query: 207 ITGTDDLPPSGS----------PILTDDIEIGTLGVVVG------KKALAIA 242
+ P GS P+ D +G + LA+
Sbjct: 299 VGLEIGGEPLGSYNDGSMIDAFPVHHDGAVVGQVTSACHSPRLEKNIGLALV 350
>gi|302188546|ref|ZP_07265219.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas
syringae pv. syringae 642]
Length = 1006
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 89/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVPACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA+ K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAAAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|294677836|ref|YP_003578451.1| sarcosine oxidase subunit alpha [Rhodobacter capsulatus SB 1003]
gi|294476656|gb|ADE86044.1| sarcosine oxidase, alpha subunit [Rhodobacter capsulatus SB 1003]
Length = 984
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 51/317 (16%), Positives = 92/317 (29%), Gaps = 62/317 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TLP R + + G ++ ++ ++ EDT++
Sbjct: 651 STLGKIVVKGPDAGRFLDMMYTNLMSTLPVGKCRYGLMCSDNGFLIDDGVVVRLSEDTWL 710
Query: 67 LEIDRSKRDSLIDKL-----------LFY-------------------KLRSNVIIEIQP 96
D + + Y KL +
Sbjct: 711 CHTTSGGADRIHGHMEDWLQCEWWDWKVYTANLTEQYAQVAVVGPKARKLLEKLGGMDVS 770
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKIAS 139
+ QE T R S + L LH+ +
Sbjct: 771 KEALPFMTYQEGTLGGFPARVFRISFSGELSYEIAVPANMGLAFWEALHKAGEEFGVMPY 830
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ H +R G + + T+ P D + IS K Y+G+ R +
Sbjct: 831 GTEALHVMRAEKGFIMIGDE-TDGTVIPQDLGLGW--AISKKKADYLGKRAQERKHMTDP 887
Query: 200 IRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAIARIDKV 247
R + + T + P G + + + V G KK +A+ +
Sbjct: 888 DRWTLVGLETLDGSVLPDGVYAIDEGVNENGQRKVQGRVTSTYYSPMLKKGIAMGLVRHG 947
Query: 248 DHAIKKGMALTVHGVRV 264
+ + + G +V
Sbjct: 948 PARMGEVLEFPADGGKV 964
>gi|50418743|ref|XP_457891.1| DEHA2C04708p [Debaryomyces hansenii CBS767]
gi|49653557|emb|CAG85941.1| DEHA2C04708p [Debaryomyces hansenii]
Length = 395
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G++ FLQ + ++ L + S L QG ++ +I+K E+ + + +
Sbjct: 72 RLSGQNVADFLQKVTPINLSELEVNSSSLSVFLNEQGGVIDDCIITKHGENEYYMVSNAG 131
Query: 73 KRDSLIDKLLF 83
R+ I L
Sbjct: 132 CREKDIAFLKK 142
>gi|226355345|ref|YP_002785085.1| aminomethyltransferase [Deinococcus deserti VCD115]
gi|259647490|sp|C1D0F7|GCST_DEIDV RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226317335|gb|ACO45331.1| putative aminomethyltransferase (Glycine cleavage system T protein)
[Deinococcus deserti VCD115]
Length = 357
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 41/105 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G+ A+ FLQ + DV L A+ + + +G ++ I + E+ ++
Sbjct: 57 SHMGEFRIQGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENEYL 116
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+ ++ S D L V + + +L+
Sbjct: 117 MVVNASNIDKDWAHLQTLAAGFGVTLTNESDRWALLAVQGPKAAE 161
>gi|330954947|gb|EGH55207.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae Cit 7]
Length = 1006
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|264678308|ref|YP_003278215.1| glycine cleavage system protein T [Comamonas testosteroni CNB-2]
gi|262208821|gb|ACY32919.1| glycine cleavage system T protein [Comamonas testosteroni CNB-2]
Length = 378
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A L++++ DV+ L R +L QG IL + ED F+
Sbjct: 59 SHMGQLLLRGPDAAAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNRGEDLFL 118
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + +++ I +
Sbjct: 119 I-VNGACKEADIAHIQ 133
>gi|291618742|ref|YP_003521484.1| GcvT [Pantoea ananatis LMG 20103]
gi|291153772|gb|ADD78356.1| GcvT [Pantoea ananatis LMG 20103]
Length = 393
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 54/311 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + + G+ FL+ ++ DV L A + +L ++ ++ ++E F
Sbjct: 78 SHMTIVDLKGERTREFLRFLLANDVAKLTQPGKALYTGMLNASAGVIDDLIVYFMDETFF 137
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFIDER----- 119
L ++ + R+ + + + V + E + + + Q + + F D +
Sbjct: 138 RLVVNSATREKDLAWIGEHAQGYGVALTERDDLVLIAVQGPQAQQKAQTLFSDAQRQAVE 197
Query: 120 -----------------------------FSIADVLL-HRTWGHNEKIASDIKTYHELRI 149
AD + + + + LR+
Sbjct: 198 GMKPFFGVQAGELFIATTGYTGEAGYEIALPAADAVGFWQRLLSAGVKPAGLGARDTLRL 257
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG--CYIGQEVVSRIQHRNIIRKRPMII 207
G+ + ++ P A M IS G +IG+E + + + K +I
Sbjct: 258 EAGMNLYGQEM-DESVSPLAANMGWT--ISWEPGDRHFIGREALESQREKGT-EKLVGLI 313
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA---------LAIARIDKVDHAIKKGMALT 258
+ +G P+ D + G L V +A+AR+ + +
Sbjct: 314 LTEKGVLRNGLPVRFTDQQ-GQLQQGVITSGSFSPTLGYSIALARV-PAGIGENAIVEIR 371
Query: 259 VHGVRVKASFP 269
+ VK + P
Sbjct: 372 NREMPVKVTKP 382
>gi|172041472|ref|YP_001801186.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
urealyticum DSM 7109]
gi|171852776|emb|CAQ05752.1| glycine cleavage system T protein [Corynebacterium urealyticum DSM
7109]
Length = 396
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 107/325 (32%), Gaps = 79/325 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A L A+I+ + + A+ S + T G I+ + ++ +D
Sbjct: 55 LSHMGEVEVSGPQAAELLDYALISR-LSAVKVGKAKYSMLCTEDGGIVDDLITYRLADDD 113
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110
F++ + + + L R+ +V + Q +++
Sbjct: 114 FLVVPNAGNAPRVAEAL---AQRAEGFDVTVVDQTAEKSLVAIQGPKAAEVMHAIVENVT 170
Query: 111 ----SNSSFIDERFSIAD---------------VLLHRT--------------------- 130
++ + D R ++ L+ RT
Sbjct: 171 DAPEASGATEDVRGAVDGLGYYAAFKGIVAGQPALIARTGYTGEDGFEIIVDNDAAEQVW 230
Query: 131 ------WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
+ + + LR+ G+ + + P DA + +L +K
Sbjct: 231 NIALAKATELDGLPCGLAARDTLRLEAGMPLYGNEL-NDELTPVDAGLGILAATK-SKDS 288
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPP-SGSPILTDD----IEIGTLGVVVGKKAL 239
++G++ + + + R + + G SG +L + IG + L
Sbjct: 289 FVGRDAIVAAKEKGAAR-VLIGLQGEGRRAARSGYAVLAGEGEDAQPIGEVTSGALSPTL 347
Query: 240 ----AIARIDKVDHAIKKGMALTVH 260
A+A +DK A ++G A TV
Sbjct: 348 GYPVAMAYVDKT--ATEEGGAATVG 370
>gi|15637153|gb|AAL04443.1| glycine decarboxylase subunit T [Beta vulgaris]
Length = 127
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK IPFL+ ++ D+ L S +G ++ +I+K+++D L ++
Sbjct: 36 LSLKGKDCIPFLEKLVVGDLAGLAPGTGTLSVFTNEKGGVIDDSVITKVKDDHIYLVVNA 95
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 96 GCRDKDLAHI 105
>gi|330938588|gb|EGH42161.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 957
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 622 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 681
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 682 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 741
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 742 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 800
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 801 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 858
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 859 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 909
>gi|327191046|gb|EGE58099.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CNPAF512]
Length = 378
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 56/302 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ S +++
Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFIVVNASCKEA 129
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 130 DLAHLQTHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A+ + R H + A + LR+ G+ D
Sbjct: 190 VSRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249
Query: 163 STIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
+T P +A ++ G G + G + R+R + + P
Sbjct: 250 TTS-PVEAALEWAMQKARRTGGA--RAGGFPGSGRILSELENGAARRR-VGLKPEGKAPV 305
Query: 216 SG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
G + + D EIG + V G A+ + + + + V
Sbjct: 306 RGHARLYADAEGRTEIGEVTSGGFGPSVEGPVAMGYVPVSYAAAGTQVYAEVRGKFLPVT 365
Query: 266 AS 267
S
Sbjct: 366 VS 367
>gi|153002184|ref|YP_001367865.1| glycine cleavage system aminomethyltransferase T [Shewanella
baltica OS185]
gi|166221568|sp|A6WSL3|GCST_SHEB8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|151366802|gb|ABS09802.1| glycine cleavage system T protein [Shewanella baltica OS185]
Length = 364
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + R+ + + +V + +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159
>gi|332971110|gb|EGK10077.1| aminomethyltransferase [Psychrobacter sp. 1501(2011)]
Length = 381
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 5/176 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDT- 64
S+ + G A +LQ ++ DV L A S +L +G I+ ++ + E+
Sbjct: 52 SHMVITDIEGSQAKAWLQKLLANDVAKLKTVGKALYSGMLNEEGGIIDDLIVYLMNEEET 111
Query: 65 -FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+ + + + RD + V + +P ++
Sbjct: 112 QYRIVSNAATRDKDLANFNKVAKGFEVTLTERPELAILAIQGPNAVAKLKQAKPTWSETL 171
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
+ L I ++ + R + D LP + L NGI
Sbjct: 172 EGLKPFVGADLTDIEAN--NWFVARTGYTGEDGVEVILPGDSAEEFYKLMLENGIK 225
>gi|260809869|ref|XP_002599727.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae]
gi|229285008|gb|EEN55739.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae]
Length = 379
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A+ F++++ DV L + +G I+ ++SK E + +
Sbjct: 56 RIHGKDAVKFIESLTVGDVAGLQENQGTLTLFTNDRGGIMDDLIVSKTSEGFLYVVTNAG 115
Query: 73 KRDSLIDKLL 82
+ I +
Sbjct: 116 CAEKDIAHMQ 125
>gi|304410728|ref|ZP_07392346.1| glycine cleavage system T protein [Shewanella baltica OS183]
gi|307304823|ref|ZP_07584573.1| glycine cleavage system T protein [Shewanella baltica BA175]
gi|304351212|gb|EFM15612.1| glycine cleavage system T protein [Shewanella baltica OS183]
gi|306912225|gb|EFN42649.1| glycine cleavage system T protein [Shewanella baltica BA175]
Length = 364
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A +L ++ + + + +
Sbjct: 50 SHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + R+ + + +V + +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAV 159
>gi|217977401|ref|YP_002361548.1| glycine cleavage system T protein [Methylocella silvestris BL2]
gi|217502777|gb|ACK50186.1| glycine cleavage system T protein [Methylocella silvestris BL2]
Length = 377
Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 47/256 (18%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT----FILEIDRSKRDSLIDKLLF-- 83
D+ +L R + +L G IL +++++ + L ++ + + + +
Sbjct: 82 DIASLNPGQMRYTQLLDANGHILDDLMVTRLANEGGRQRLFLVVNAASKAADFAHISAAL 141
Query: 84 --YKLR--------------------------SNVII---EIQPINGVVLSWNQEHTFSN 112
+ L S + ++GV L ++
Sbjct: 142 PGFALTPLPQLALLALQGPQAAEVLEKIVPVVSRLTFMRSAEFEVDGVRLRISRSGYTGE 201
Query: 113 SSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
F I + A+V + LR+ G+ D P +A
Sbjct: 202 DGFEISLPAAKAEVFARTLLSDPRVFPVGLGARDSLRLEAGLCLCGHDI-DGATDPVEAG 260
Query: 172 MDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEI 227
+ L IS + G + G ++++ R R+R +I G+ I D I
Sbjct: 261 L--LWSISKRRRVEGGFPGFARLAQVMARGPERRRVGLILDGKAPAREGAEIETPDGRAI 318
Query: 228 GTLGVVVGKKALAIAR 243
G L G A ++ R
Sbjct: 319 GRLTS--GGYAPSLGR 332
>gi|240978642|ref|XP_002403006.1| dimethylglycine dehydrogenase, putative [Ixodes scapularis]
gi|215491270|gb|EEC00911.1| dimethylglycine dehydrogenase, putative [Ixodes scapularis]
Length = 758
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 96/294 (32%), Gaps = 61/294 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + ++V GK FL ++ + + S +LTP+GK+ ++++ +D
Sbjct: 430 IDLTPFAKLEVTGKDVNVFLDRLLANKLPKVNS--INISHMLTPKGKVYAEVTVTRLAQD 487
Query: 64 TFILEI-DRSKRDSLI---DKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNS 113
+ + S+ L D + +++ +V I L H+ ++
Sbjct: 488 KYFVITGSGSELHDLRWMEDHVREWRI-EDVEINNVTDRIAALGIAGPHSANLLSKLTDV 546
Query: 114 SFIDERFSIA--------------------DVLLHRTWGHNEKIAS-------------- 139
S D++F L + + ++
Sbjct: 547 SLDDDKFPFLHAREMSVAGIPVTALRISYTGELGWELYHDRTQTSALYEALLDAGQAYSI 606
Query: 140 -DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195
D TY + LRI G D + P +A + I + K ++G+E + +
Sbjct: 607 GDFGTYALNSLRIEKGFRLWGADMTVDS-NPFEAGLGPF--IRMKKPADFVGKEALQKSL 663
Query: 196 HRNIIRKRPMI-ITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIA 242
+K + + T+ P + +G V A+A
Sbjct: 664 REGFRKKLVHLSVDATEVDPEGNETVWCSGKVVGYTTSGSYGCQVRQSLAMAYL 717
>gi|99080812|ref|YP_612966.1| sarcosine oxidase alpha subunit family protein [Ruegeria sp.
TM1040]
gi|99037092|gb|ABF63704.1| sarcosine oxidase alpha subunit family [Ruegeria sp. TM1040]
Length = 1011
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 680 VKGPDAGKFLDMLYTNMMSTLKIGKCRYGLMCSENGFLVDDGVVARIDEDTWLCHTTTGG 739
Query: 74 RDSLIDKL 81
D + +
Sbjct: 740 ADRIHAHM 747
>gi|237802379|ref|ZP_04590840.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025236|gb|EGI05292.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 792
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 457 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 516
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 517 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 576
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 577 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYALGVLEKIAEAGKQYNLTP 635
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 636 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 693
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 694 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 744
>gi|71003822|ref|XP_756577.1| hypothetical protein UM00430.1 [Ustilago maydis 521]
gi|46096108|gb|EAK81341.1| hypothetical protein UM00430.1 [Ustilago maydis 521]
Length = 454
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 95/298 (31%), Gaps = 53/298 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K G A+ FLQ + A + ++P + S +++ QG IL +I+K +D+F + +
Sbjct: 137 KFKGPGALKFLQHLTPASLTSMPAFSSTLSVLMSEQGGILDDLIITKHADDSFYVVTNAG 196
Query: 73 KRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEH----------------TFSNS 113
R + V E+ G++ TF S
Sbjct: 197 CRTEDLAWFKKQLDAWKGDAVKHEVMDDWGLLALQGPTAAKVLEKLVGDFDLNTLTFGKS 256
Query: 114 SFIDERFSIADVLLH--------------------------RTWGHNEKIASDIKTYHEL 147
F+ + + V H +E + + L
Sbjct: 257 VFVPLKIAGDKVECHVARAGYTGEDGFEISIPPASTVKVAEALLSDSEVQLAGLAARDSL 316
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ G+ D +++ P + + G ++G E V + R+R +
Sbjct: 317 RLEAGMCLYGHDL-DASVSPVEGALAWCVGKDRRAAADFLGAERVLKELKEGPPRRRIGL 375
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVH 260
+ + +G + + K +A+A ++ H KKG L V
Sbjct: 376 FIDGGIAREGANLFTPEGKVVGRVTSGIPSPTLGKNIAMALVENGQH--KKGTKLKVE 431
>gi|13241964|gb|AAK16489.1|AF329478_4 sarcosine oxidase subunit A [Arthrobacter sp. 1IN]
Length = 967
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ GK A FL I T L +AR + G + + ++ ED F++
Sbjct: 637 IEIRGKDAAEFLNRIYTNGYTKLKVGMARYGVMCKADGMVFDDGVTLRLAEDRFLMHTTT 696
Query: 72 SKRDSLIDKL 81
++D L
Sbjct: 697 GGAAGVLDWL 706
>gi|116252318|ref|YP_768156.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256966|emb|CAK08060.1| putative aminomethyltransferase (glycine cleavage system t protein)
[Rhizobium leguminosarum bv. viciae 3841]
Length = 378
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 91/300 (30%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ + +++
Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGCILDDLMITHL-DDHLFIVVNAACKEA 129
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + + +I +Q V + + F+D R
Sbjct: 130 DVAHLKAHIGDQCDITVLDRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A R H + A + LR+ G+ D
Sbjct: 190 VSRSGYSGEDGFEISIPSDKAVDATMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G G + G + R+R + + P G
Sbjct: 250 TTS-PVEAALEWAMQKARRGNGARAGGFPGSGRILSELENGASRRR-VGLKPEGKAPVRG 307
Query: 218 -SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D +EIG + V G A+ + + + + S
Sbjct: 308 HAKLYADAEGKVEIGEVTSGGFGPSVEGPVAMGYVPLSHAAAGTLVYAEVRGKYLPITVS 367
>gi|86136319|ref|ZP_01054898.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
gi|85827193|gb|EAQ47389.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
Length = 373
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + T DV R I +G ++ ++ K+ D + L I
Sbjct: 65 VEISGPDAAQLIQYLTTRDVSKTKIGQGRYVPICNHEGMLINDPVLLKLASDRYWLSIAD 124
Query: 72 SKRD 75
S +
Sbjct: 125 SDIE 128
>gi|149914513|ref|ZP_01903043.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
gi|149811306|gb|EDM71141.1| glycine cleavage T protein (aminomethyl transferase) [Roseobacter
sp. AzwK-3b]
Length = 369
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 51/307 (16%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI-D 70
+++ G A +Q + D+ + I+ G +L + K+ ED + + I D
Sbjct: 66 VELRGPDAGRLMQMLTPRDLRGMTPGQCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE-------RFSIA 123
+ + + R +V+++ ++ + + + + F D+ RF +
Sbjct: 126 SDLLYWV--RATAHGWRLDVLVDEPDVSPLAVQGPRADDLMAAVFGDKVRDIRFFRFGVF 183
Query: 124 DVLLHRTWGHNEKIA-----------SDI--KTYHEL------------------RINHG 152
D + SDI +H L RI G
Sbjct: 184 DFQGRDMVIARSGYSKQGGFEIYVEGSDIGMPLWHALMEAGAGMDVHAGCPNLIERIEGG 243
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ D PH+ + GC IG++ + R+ +++ +
Sbjct: 244 LLSYGNDMTDDNT-PHECGLGRFCNTHTAIGC-IGRDALLRVAKEGPVQQIRAVAIDGPK 301
Query: 213 LPPSGS--PILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTVHGVRV 264
+PP P+L +G + A+ + R+ D + +
Sbjct: 302 VPPCDHWWPLLAQGKPVGRISSAAWSPDFGTNVAIGMVRMTHWDAGTRLQVQTPNGIREA 361
Query: 265 KASFPHW 271
+ W
Sbjct: 362 EVREAFW 368
>gi|77461426|ref|YP_350933.1| sarcosine oxidase, alpha subunit, heterotetrameric [Pseudomonas
fluorescens Pf0-1]
gi|77385429|gb|ABA76942.1| sarcosine oxidase alpha subunit [Pseudomonas fluorescens Pf0-1]
Length = 1005
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 87/290 (30%), Gaps = 57/290 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLELYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKLLSAVTDIDLA 790
Query: 96 PINGVVLSWNQ------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144
++W + SF E +V G EKI K Y
Sbjct: 791 NEAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVEAGKQYNLTPY 850
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
H LR G + D ++ P D M G + +IGQ ++R
Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGQRGMNREDCVRD 908
Query: 200 IRKRPMIITGTDDLP--PSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ + + +G + +L
Sbjct: 909 QRKQLVGLKPIDPNVWLPEGAQLVFNTKQSIPMTMVGHVTSSYAHNSLGY 958
>gi|330874532|gb|EGH08681.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 360
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L QG ++ ++ D +
Sbjct: 50 SHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQGGVIDDMIVYLTA-DGY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|311741484|ref|ZP_07715308.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303654|gb|EFQ79733.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 370
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 98/312 (31%), Gaps = 60/312 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A FL ++ L A+ S I G I+ + + EED F
Sbjct: 51 LSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDKF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF------------ 110
++ + D++ D+L R+ +V ++ + + +++
Sbjct: 111 LVVPNAGNADTVWDELNN---RAEGFDVTLKNESRDVAMIAVQGPKAAEILVPLVEDNKQ 167
Query: 111 ----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD---- 140
+ + I R + W K +
Sbjct: 168 DEVYNLGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGEEYDIK 227
Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ LR+ G+ + I P +A M + + ++G EV+ R +
Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMAR--AFAKKEADFVGAEVI-RQRAA 283
Query: 198 NIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ +T T +G+ + D ++GT+ L V A+ + A
Sbjct: 284 EGPQVAITGLTSTQRRAARAGAEVFMGDKKVGTVTSGQPSPTLGH----PVAIALLETSA 339
Query: 257 LTVHGVRVKASF 268
G V+
Sbjct: 340 ELEPGAEVEVEI 351
>gi|49474552|ref|YP_032594.1| glycine cleavage system aminomethyltransferase T [Bartonella
quintana str. Toulouse]
gi|49240056|emb|CAF26481.1| Glycine cleavage system protein t [Bartonella quintana str.
Toulouse]
Length = 372
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 35/260 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL D L +R + +L Q IL +++++ E F+
Sbjct: 61 SHMQLITVEGAQAVEFLSYAFPIDAALLKIGQSRYNYLLNEQAGILDDLILTRLAECRFM 120
Query: 67 LEIDRSKRDSLIDKLLFYKL----R----SNVIIEIQPINGVVLSW-------------- 104
L + + + +L + R V++ +Q +
Sbjct: 121 LVANAGNAQADLAELEKRAVGFECRVIALERVLLALQGPEAAAVIADAGLPGNELLFMQG 180
Query: 105 ---NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRINHGIV 154
Q+ + S + E + + EK+ D + LR+ G+
Sbjct: 181 FEPQQDWFIARSGYTGEDGFEIALPQRQAQALAEKLLCDSRVEWVGLAARDSLRLEAGLC 240
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D P T P DA + ++ K + G + + R R + T
Sbjct: 241 LHGNDITPDTT-PIDAALAWAVPKNVREKAQFYGAKAFLEALEKGPSRCRVGLKPQTRQP 299
Query: 214 PPSGSPILTD-DIEIGTLGV 232
+G+ +L D +IG +
Sbjct: 300 IRAGAVLLDDLGNQIGVVTS 319
>gi|83951959|ref|ZP_00960691.1| putative aminomethyltransferase protein [Roseovarius nubinhibens
ISM]
gi|83836965|gb|EAP76262.1| putative aminomethyltransferase protein [Roseovarius nubinhibens
ISM]
Length = 779
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 89/288 (30%), Gaps = 62/288 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62
+V G A +Q +T ++ L +A+ G ++ + ++ E
Sbjct: 449 EVTGPDAEELMQLCVTRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 508
Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV--------IIEIQPIN 98
L D+ ++ + L S + I+ P
Sbjct: 509 TSGLWLREQAERHGLNAWVRNSTDQLHNIAVQGRHSRDIL-SKIFWTPPQQPTIDELPWF 567
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DI 141
+ ++ + S S + R + L + + H + +
Sbjct: 568 RLTIA--RLGDLSGPSVVISRTGYSGELGYEIFCHPKHAVEIFDKVWEAGAPYGITPLGL 625
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LRI G++ ++F T P +A + + + +IG+ V R +
Sbjct: 626 AALDMLRIEGGLIFAGSEF-DDTTDPFEAGIGFTVPLKSMEDDFIGRVAVER--RKASPH 682
Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVG----KKALAIARI 244
++ + + P G + ++G + + K +A+ R+
Sbjct: 683 RKLVGFEVQGGVVPVPGDCVRVGKAQVGEITSAMKSPILGKVIALGRV 730
>gi|296536598|ref|ZP_06898677.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296263076|gb|EFH09622.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 367
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 50/285 (17%)
Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRS 88
AD+ L + +L P+G I+ F+++ + D L ++ S++ + L+ L +
Sbjct: 76 ADIRILKPGRQKYGLLLNPEGGIVDDFMVANLGGDRLFLVVNASRKAVDLP-LIEAALPA 134
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------------------------ 118
V + P ++ + +
Sbjct: 135 GVRLTPLPDRALLAFQGPQAVPLLAGLAPAVAALPFMGVAETEIDGIPVLVSRSGYTGED 194
Query: 119 ------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
A+ L R + + + LR+ G+ D T P +A +
Sbjct: 195 GVEISVPAERAEALAKRLLSLPGVVPAGLGARDSLRLEAGLCLYGNDI-DETTSPVEAAL 253
Query: 173 DLLNG----ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEI 227
G + + G E R R I+ + + I +
Sbjct: 254 VWTIGKRRRMEWN---FPGAERTRAELENGPSRLRVGILPEGRQPARAHTAIHAPGGAAM 310
Query: 228 GTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + +L A+ + + A + L V G + A
Sbjct: 311 GEITSGTFGPSLNGPCAMGYVARGHAADGTALELQVRGKALPARV 355
>gi|290955276|ref|YP_003486458.1| dehydrogenase [Streptomyces scabiei 87.22]
gi|260644802|emb|CBG67887.1| putative dehydrogenase [Streptomyces scabiei 87.22]
Length = 807
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 57/282 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A L+ + T V + L G I ++++ DTF + +
Sbjct: 495 LEVSGPGAADLLERLCTGKVAK-SVGSVTYTLFLDHDGGIRSDVTVARLAHDTFQIGANG 553
Query: 72 SK-RDSLIDKL-----------------------------------------LFYKLRSN 89
+ D + L L Y R+
Sbjct: 554 NIDLDWITRHLPADGTVQVRDITPGTCCIGLWGPLARKVLQPLTDADFSNDGLKY-FRAK 612
Query: 90 -VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + LS+ E + + D+ + D L + + ++ LR
Sbjct: 613 QAYIGSVPVTAMRLSYVGELGWEIYTTADQGQKLWD-TLWEAARPLGGVIAGRGAFNSLR 671
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G TD P++A + + L K +IG++ + R + +R++ +
Sbjct: 672 LEKGYRSFGTDMTYEHD-PYEAGVGF--AVKLDKDDFIGKDALLR--RKENVRRKLSCLV 726
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244
D + P+L D +G + K +A A +
Sbjct: 727 VDDPRSVVLGKEPVLDGDRPVGYVTSAAYGYTIGKGIAYAWL 768
>gi|271965320|ref|YP_003339516.1| dimethylglycine dehydrogenase precursor [Streptosporangium roseum
DSM 43021]
gi|270508495|gb|ACZ86773.1| dimethylglycine dehydrogenase precursor [Streptosporangium roseum
DSM 43021]
Length = 808
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 88/285 (30%), Gaps = 62/285 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G+ A FL+ I T DV P +L G I ++++ D F + +
Sbjct: 495 IEVGGRGAAAFLRRISTGDVGR-PVGSVTYCLLLNADGGIRGDITVARLGPDLFQIGANG 553
Query: 72 SK-RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE------------ 118
+ D L L S VI +I V W
Sbjct: 554 NLDLDWLHRHLPADG--SVVIRDITAGTCCVGVWGPRARDLMVPLAGPDFSRDGFRYFRG 611
Query: 119 -------------RFSIADVLLHRTWGHNEK-----------------IASDIKTYHELR 148
R S L + + IA + LR
Sbjct: 612 KRGHVGTVPVTALRLSYIGELGWELYTTADLGAKLWDTLWEEGLRHGVIAGGRGAFDSLR 671
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNIIRKRP- 204
+ G TD P++A + G ++ K G +IG+E + + R +R+R
Sbjct: 672 LEKGYRSFGTDMTYEHD-PYEAGL----GSAVRKAGTGDFIGRE--ALQERRASVRRRLT 724
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARI 244
+ I G D + P+ +G + + +A A +
Sbjct: 725 CLTIDGPDAVVMGKEPVYDGGKCVGYVTSAAYGHTIGRGVAYAWL 769
>gi|126435898|ref|YP_001071589.1| glycine cleavage system aminomethyltransferase T [Mycobacterium sp.
JLS]
gi|126235698|gb|ABN99098.1| glycine cleavage system T protein [Mycobacterium sp. JLS]
Length = 364
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 60/303 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A ++ A +T D+ + A+ + G ++ + + +D
Sbjct: 52 SHLGKALVRGPGAAAYVNAALTNDLNRIGPGKAQYTLCCNDSGGVIDDLIAYYVSDDEIF 111
Query: 67 LE---------------IDRSKRDSLIDKLLFYKLRSNVIIEIQPI--NGVVLSWNQEHT 109
L + RS ++ Q V+
Sbjct: 112 LVPNAANTAAVVAALAERAPDGVTVTDEH------RSYAVLAAQGPKSAEVLGGLGLPTD 165
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------------- 146
++D + V + RT E+ + + +
Sbjct: 166 MDYMGYVDAELNGTAVRVCRTGYTGEQGYELLPAWDDAPAVFDALVSAVRDAGGELAGLG 225
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR- 201
LR G + P I P A + K + G++ + + R
Sbjct: 226 ARDTLRTEMGYPLHGHELSPE-ISPLQARCGW--AVGWRKDAFWGRDALLAEKEAGPKRL 282
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMAL 257
R + G L P + + D +G K +A+A +D H I G +
Sbjct: 283 LRGLRAVGRGVLRPDLT-VFDGDTAVGVTTSGTFSPSLKVGIALALVDTA-HDIADGSRV 340
Query: 258 TVH 260
V
Sbjct: 341 EVD 343
>gi|3334196|sp|O23936|GCST_FLATR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|2467117|emb|CAB16917.1| T-Protein precursor [Flaveria trinervia]
Length = 407
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 91/280 (32%), Gaps = 54/280 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK + FL+ ++ ADV L + +G + +I+K+
Sbjct: 79 SLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVT 138
Query: 62 EDTFILEIDRSKRD---------------------------------------SLIDKLL 82
+D L ++ RD S + L
Sbjct: 139 DDHIYLVVNAGCRDKDLAHIEQHMKAFKAKGGDVSWHIHDERSLLALQGPLAGSTLQHLT 198
Query: 83 FYKLRSNV------IIEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
L S + II+I + + E F S + +A +L ++ G
Sbjct: 199 KDDL-SKMYFGDFRIIDISGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKV 257
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ LR+ G+ D I P +A + G +G ++G EV+ +
Sbjct: 258 RLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLTWAIGKRRRAEGGFLGAEVILK 314
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+R + + T S S I + IG +
Sbjct: 315 QIADGPAIRR-VGLFSTGPPARSHSEIQNEQGENIGEVTS 353
>gi|294676692|ref|YP_003577307.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003]
gi|294475512|gb|ADE84900.1| glycine cleavage T protein-1 [Rhodobacter capsulatus SB 1003]
Length = 369
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 58/289 (20%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A+ L+A++ D+ L R + G IL +++ D L ++ + ++
Sbjct: 66 EAVAALEALVPVDIAGLGLNRQRYAMFTNEAGGILDDLMVANRG-DHLFLVVNAACAEAD 124
Query: 78 IDKLLFYKLRSNV----------IIEIQPINGVVLSWNQEHTFSNSSFID-ERFSIADVL 126
I L R++V ++ +Q + F+D RF
Sbjct: 125 IAHL-----RAHVPGVTVVEGRGLLALQGPLAETALARLVPGVAAMRFMDSARFVWEGAD 179
Query: 127 LH--------------------------RTWGHNEKIASDIKTYHELRINHGIVDPNTDF 160
L E + LR+ G+ D
Sbjct: 180 LWVSRSGYTGEDGFEISVPDAVIEGFARALLAMAEVAPIGLGARDSLRLEAGMPLYGHDI 239
Query: 161 LPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
T P +A + +G + G + + R RKR +
Sbjct: 240 DTETT-PVEAGLSWAIQKARRSGGAREGGFPGADRILRELTEGAARKRIGLRPEGRAPMR 298
Query: 216 SGSPILT---DDIEIGTLG------VVVGKKALAIARIDKVDHAIKKGM 255
G I IG + + G A+A +D A G
Sbjct: 299 EGVEIYAEATGGSPIGRVTSGGFGPSIDGPMAMAYLPVDLAPGATVYGE 347
>gi|83945324|ref|ZP_00957672.1| glycine cleavage system T protein [Oceanicaulis alexandrii
HTCC2633]
gi|83851158|gb|EAP89015.1| glycine cleavage system T protein [Oceanicaulis alexandrii
HTCC2633]
Length = 364
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 53/308 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G + L+ +ITAD+ L + + +L +G I ++S+ +++
Sbjct: 53 SHMGQARLIGDESA--LEKLITADLAALQSGEQKYTLLLNSEGGIKDDLMVSRPDDEGLF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118
L ++ + + S D Y + + ++E+ + L Q D
Sbjct: 111 LVVNAACKRSDFD----YIIEATKGVAELVELDGRALLALQGPQAGAVMAELCPDAAKMV 166
Query: 119 -----RFSIADVLL--------------------------HRTWGHNEKIASDIKTYHEL 147
F + + L + + L
Sbjct: 167 FMQAGWFEVDGLRLMISRSGYTGEDGFEISVANEHASDFARKLLSDARVKPIGLGARDSL 226
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206
R+ G+ D +T P +A + S + + G + + +KR I
Sbjct: 227 RLEAGLCLYGHDMDEATS-PIEAALTWAVAKSRRERADFPGAARILKDIADKPAKKRVGI 285
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVH 260
G+ I + +G + V A+ R D + + +
Sbjct: 286 ALKDRAPAREGTEIAVNGEVVGVVTSGGFGPTVGAPIAMGYVRTDLATPGTQVDLMVRGK 345
Query: 261 GVRVKASF 268
+
Sbjct: 346 ARPAEVVK 353
>gi|86136100|ref|ZP_01054679.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
gi|85826974|gb|EAQ47170.1| aminomethyl transferase family protein [Roseobacter sp. MED193]
Length = 818
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 13/147 (8%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A L + + + +L G+I L I ++ ED L
Sbjct: 499 IEVAGPDAYALLDRLTANRMPQ-KVGSITLTHMLNRAGRIELETTIVRMAEDRLYLVCAA 557
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------EHTFSNSSFIDERF 120
L+D L ++ ++ I+ LS N + N+SF
Sbjct: 558 FFEQRLLDHLEAHRDGADAIVTALSSTWGALSLNGPRSRDVLGACTDAALDNASFRWLSA 617
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHEL 147
+ H+ W A ++ +
Sbjct: 618 QKITIAGHKVWALRVSYAGELG-WELH 643
>gi|307307892|ref|ZP_07587617.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C]
gi|306901508|gb|EFN32111.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C]
Length = 379
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L+ ++ ADVL L R G IL +I D L ++ + +D+
Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129
Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113
+ L L +I +Q P G VL W E +
Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVTEADLHDV 187
Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
S I R R H + + + LR+ G+ D
Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247
Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+T P +A ++ G + G + + R+R + + P
Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAARILAELTDGVSRRR-VGLRPEGRAP 305
Query: 215 PSG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G + + D+ GT+ V G A+ + + + + + +
Sbjct: 306 VRGNANLFADEEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365
Query: 265 KAS 267
+
Sbjct: 366 AVT 368
>gi|89054677|ref|YP_510128.1| sarcosine oxidase alpha subunit family protein [Jannaschia sp.
CCS1]
gi|88864226|gb|ABD55103.1| sarcosine oxidase alpha subunit family [Jannaschia sp. CCS1]
Length = 1009
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A F+ + T + +L R + + G ++ ++ +++EDTF+
Sbjct: 675 STLGKIIVKGPDAPKFMDMLYTNMMSSLKPGKCRYGLMCSENGFLMDDGVVVRLDEDTFL 734
Query: 67 LEIDRSKRDSLIDKL 81
D + +
Sbjct: 735 AHTTSGGADHVHAHM 749
>gi|294938730|ref|XP_002782170.1| Dimethylglycine dehydrogenase, putative [Perkinsus marinus ATCC
50983]
gi|239893668|gb|EER13965.1| Dimethylglycine dehydrogenase, putative [Perkinsus marinus ATCC
50983]
Length = 885
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S+ + V G A+ LQ + TA++ P +A+ G +L F + ++ ED
Sbjct: 527 IDMSSFGKLIVKGHGALDLLQWVCTANIDR-PVGSIVYTAMANDLGGMLADFTVCRLGED 585
Query: 64 TFILEIDRSKRDSLIDKL 81
+F + ++ + + D L
Sbjct: 586 SFYITTTSNQPEMIKDHL 603
>gi|304393092|ref|ZP_07375021.1| sarcosine oxidase subunit alpha [Ahrensia sp. R2A130]
gi|303294857|gb|EFL89228.1| sarcosine oxidase subunit alpha [Ahrensia sp. R2A130]
Length = 1007
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 23/211 (10%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL-YFLISKIEE 62
V +S I + G A F+ I + LP AR +L G IL ++++
Sbjct: 673 VDVSTLGKIDIQGPDATEFINRIYSNAFAKLPVGKARYGLMLREDG-ILFDDGTTWRLDD 731
Query: 63 DTFILEIDRSKRDSLIDKLLFYK------LRSNVIIE--IQPINGVVLSWNQ-----EHT 109
+++ + +++ L +++ L V + GV ++ +
Sbjct: 732 HRYLMTTTTAGAGLVMEHLEYHRDVVWPDL--KVALTSVTDEWAGVAVAGPKSRDLLAAC 789
Query: 110 FSNSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIF 166
+ D V G K+A + G D L +
Sbjct: 790 VEDCDVSDTGLPFMGVRDGTIGGIPVKLARLSFSGEMAFEVYCGFTHGQAIWDALLAAGE 849
Query: 167 PH---DALMDLLNGISLTKGCYIGQEVVSRI 194
P ++ L + + KG G E+ R
Sbjct: 850 PLGVTPYGLEALGTLRIEKGHVAGPELNGRT 880
>gi|2498527|sp|Q63342|M2GD_RAT RecName: Full=Dimethylglycine dehydrogenase, mitochondrial;
AltName: Full=ME2GLYDH; Flags: Precursor
gi|56689|emb|CAA39468.1| dimethylglycine dehydrogenase [Rattus norvegicus]
Length = 857
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 48/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S
Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582
Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHT-----FSNSSF 115
F+L + + +R +V I I GV+ ++
Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642
Query: 116 IDE--------------------RFSIADVLLHRTWGHNEKIAS---------------D 140
D+ R S L + E A+ +
Sbjct: 643 SDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDN 702
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ ++ T P +A +D I L K + G++ + +I+ +
Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPADFTGKQALKQIKAK 759
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TDD+ P G+ + IG + A A ++ +
Sbjct: 760 GLKRRLVCLTLATDDVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEVG 819
Query: 251 IKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 820 QQVEVELLGKNYPATII 836
>gi|71411618|ref|XP_808051.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener]
gi|70872174|gb|EAN86200.1| glycine cleavage T-protein, putative [Trypanosoma cruzi]
Length = 373
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 57/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47
S+ F +V G F + + + V L + + +
Sbjct: 54 SHVGFFEVRGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLA 113
Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86
+GKI+ + +++ + D ++E+DR S +++L K
Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173
Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
R +V ++ I S++ E F I + ++LL + + + +
Sbjct: 174 GRRSVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200
LR G+ + + + P A LM + + +G +IG E V R + +
Sbjct: 230 SLRTEAGLCLYSHEL-SEEVNPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287
Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255
R R I++ + +G PIL D+ +G + V + +A+ ID+ + +
Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETV 347
Query: 256 ALTVHGVRV--KASFP 269
L V G R+ + + P
Sbjct: 348 ELEVRGKRLPGEVTLP 363
>gi|330979974|gb|EGH78244.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 735
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 400 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 459
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 460 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 519
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 520 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 578
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 579 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 636
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 637 EQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 687
>gi|260426340|ref|ZP_05780319.1| sarcosine dehydrogenase [Citreicella sp. SE45]
gi|260420832|gb|EEX14083.1| sarcosine dehydrogenase [Citreicella sp. SE45]
Length = 811
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 74/270 (27%), Gaps = 52/270 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A LQ I D+ P + +L +G I + + ED F +
Sbjct: 493 LKGPDAESALQWICAGDIGG-PVGTLTYTQMLNDRGGIEADLTVLRRAEDEFYIVTGTGF 551
Query: 74 RDSLIDKLLF------------------------YKLR---SNVIIEIQPINGVVLSWNQ 106
D + + R + V + +
Sbjct: 552 ATRDFDWIKRGIPKGANAQLIDVTSGHAVLSLMGPRARDILARVTRADLTNAALPFGTAR 611
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH-----------------ELRI 149
+ + + R S L E A+ H LR+
Sbjct: 612 QIAIAGAPVWALRVSYVGELGWELHMPVESAATVFDALHMAGASHGLVDAGYRAIETLRL 671
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G D P + P +A + + KG + G+E + + + +RK +T
Sbjct: 672 EKGYRAWAGDIGPDST-PLEAGLGF--AVKPGKGEFRGREAIVAQKAKG-LRKMLATVTA 727
Query: 210 TDDLPPSG-SPILTDDIEIGTLGVVVGKKA 238
++ G I + +G L G
Sbjct: 728 APEVILLGRETIFRNGERVGYLSS--GGYG 755
>gi|254477430|ref|ZP_05090816.1| sarcosine oxidase, alpha subunit family [Ruegeria sp. R11]
gi|214031673|gb|EEB72508.1| sarcosine oxidase, alpha subunit family [Ruegeria sp. R11]
Length = 1010
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTWL 731
Query: 67 LEIDRSKRDSLIDKL 81
+ + +
Sbjct: 732 CHTTTGGAERIHGHM 746
>gi|3334197|sp|O49849|GCST_FLAAN RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|2894400|emb|CAA94902.1| T-protein [Flaveria anomala]
Length = 407
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK + FL+ ++ ADV L + +G + +I+K+
Sbjct: 79 SLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVT 138
Query: 62 EDTFILEIDRSKRDSLIDKL 81
+D L ++ RD + +
Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158
>gi|330874745|gb|EGH08894.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 1006
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 56/322 (17%), Positives = 97/322 (30%), Gaps = 71/322 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTKQAIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967
Query: 240 AIARI-DKVDHAIKKGMALTVH 260
+ RI ++V + G +
Sbjct: 968 GLKRIGERVFAPLADGSVIEAE 989
>gi|327263078|ref|XP_003216348.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like
[Anolis carolinensis]
Length = 787
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 64/320 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + G ++ L + + + S +LTP+G++ +S +
Sbjct: 452 IDLTPFGKFSIKGSDSVKLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHLRPG 509
Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLF--- 83
F+L I ++ KL
Sbjct: 510 EFMLVTGSGSELHDLRWIEEEAIRGEYNVDIKNVTDEIGVLGIAGPYAREVLQKLTTEDL 569
Query: 84 ------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137
+ L ++ I P+ + +S+ E + ER A + +E+
Sbjct: 570 SDAAFNFLLSRHLKIADIPVTAIRISYTGELGWE---LYHERKDSAALYSAIMEAGHERG 626
Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194
+ TY + LR+ G + T P +A + I L K +IG++ + +I
Sbjct: 627 IDNFGTYAMNTLRLEKGFRAWGAEMNCDT-NPLEAGLKYF--IKLNKPADFIGKQALKQI 683
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV------GKKALAIARIDKV 247
+ + + R+ + TD++ P G+ + D+ IG A A ++
Sbjct: 684 KEKGLERQLVYLTLKTDNVDPEGNESVWYDNKVIGNTTSGCYSYSTRQSLAFAYVPVELS 743
Query: 248 DHAIKKGMALTVHGVRVKAS 267
K + L
Sbjct: 744 KVGQKMEVELLGEKYPATII 763
>gi|15966028|ref|NP_386381.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021]
gi|15075298|emb|CAC46854.1| Probable dimethylglycine dehydrogenase [Sinorhizobium meliloti
1021]
Length = 815
Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 89/317 (28%), Gaps = 57/317 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S ++ G+ A +L IT V + +G+IL + IEED F
Sbjct: 496 LPGFSRFRLKGEGAREWLSGPITGRVPK--PGRIGLAYFADDKGRILTEMSVMAIEEDFF 553
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPI-----------------------NGVVL 102
L + + + L ++ ++ + + +
Sbjct: 554 FLITAATAQWHDFEWLRKHR-PADAAFTLDDVTVKFACQILTGPKSRAILAEVSDADLAK 612
Query: 103 SWNQEHTFSNSS--FIDERFSIADVLLHRTWGHNEKIAS-----------------DIKT 143
W T + R S A L E A+ ++
Sbjct: 613 GWLTHQTAQIAGRYCQLVRVSFAGELGWEIHTKVEDTAAVFDAVWDAGQKHGLKPFGMEA 672
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G D ++ + K + G+ + R + + + ++
Sbjct: 673 LDSLRIEKGYRAWKGDLSTDYTV-LQGGLERF--VDWAKPDFKGKAALEREKQQGVTKRF 729
Query: 204 P-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMA 256
+ + D P S + + +G AL + R D + +
Sbjct: 730 VTLTVEAGDCDAPYMSTLWSGGEVVGETTSGNWGYRTGKSIALGMLRADLAVPGQEVEVE 789
Query: 257 LTVHGVR--VKASFPHW 271
+ + V+ P W
Sbjct: 790 IFGDRFKAIVQPDQPLW 806
>gi|262196485|ref|YP_003267694.1| glycine cleavage system protein T [Haliangium ochraceum DSM 14365]
gi|262079832|gb|ACY15801.1| glycine cleavage system T protein [Haliangium ochraceum DSM 14365]
Length = 389
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A +Q ++T DV L A + + G I+ ++ + + ++
Sbjct: 59 SHMGEASLRGPRAAEAVQRLVTNDVGKLVDGAAMYTVMCYEHGGIVDDCIVYRRSAENYL 118
Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTF 110
+ ++ + + + + L + V+ E + + +
Sbjct: 119 IVLNAANTAKDLAWIREHAEPLGAEVVDESDDTALIAVQGPKAVAL 164
>gi|313202090|ref|YP_004040748.1| glycine cleavage t protein (aminomethyl transferase) [Methylovorus
sp. MP688]
gi|312441406|gb|ADQ85512.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. MP688]
Length = 966
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 84/275 (30%), Gaps = 63/275 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A FL+ T T R + +L G ++ + +I ED F +
Sbjct: 647 LEVRGPDAAEFLERFYTGSFKTQKIGRTRYALLLDEAGVMVDDGIACRIAEDYFYITAST 706
Query: 72 SKRDSLIDKLLFY-------------------------KLR---SNVIIEIQPINGVVLS 103
+ ++ ++ + R S + + +
Sbjct: 707 TNAAAVYREMQRWLQIWQLDVGLVNVTGAYGGINLAGPAARGILSKLTLRPLDDASLPF- 765
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + R + + + S ++ L + +G+ + F
Sbjct: 766 --GAVCDTEIAGVPARLIRVGFVSDLAFEMHVPAGSAQHVWNAL-LENGVAEGLRPFGTD 822
Query: 164 T--------------------IFPHDALMDLLNGISLTKGCYIGQ---EVVSRIQHRNII 200
T P +A D I K +IGQ ++++R +
Sbjct: 823 TQRLLRLEMGNHLIGQDTDGLTQPFEAGSD--GAIQFAKPFFIGQRSLQIIAR----KPL 876
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
KR + T ++ G I ++ IG G + G
Sbjct: 877 NKRLVPFTLSEGY--QGETINECNLVIGADGNIKG 909
>gi|220914329|ref|YP_002489638.1| sarcosine oxidase subunit alpha family [Arthrobacter
chlorophenolicus A6]
gi|219861207|gb|ACL41549.1| sarcosine oxidase, alpha subunit family [Arthrobacter
chlorophenolicus A6]
Length = 980
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 53/281 (18%), Positives = 91/281 (32%), Gaps = 62/281 (22%)
Query: 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
M + L I++ GK A FL + T L AR + G I + ++
Sbjct: 636 MDATTL---GKIEIRGKDAGEFLNRVYTNAFKKLAPGSARYGVMCLADGMIFDDGVTLRL 692
Query: 61 EEDTFILEIDRSKRDSLIDKLLFY---------------------------KLR---SNV 90
+EDTF + ++D L + K R + V
Sbjct: 693 DEDTFFMTTTTGGAAKVLDHLEEWLQTEWPELDVQCTSVTEQWNTIAVVGPKSREVIAKV 752
Query: 91 IIEIQPINGV------VLSWNQEHTFSNSSFIDERFSIADVLLHR----------TWGHN 134
E+ G+ +++ + S R S + L + TW
Sbjct: 753 APELAANGGLDAENFPFMTFRETTLASGVRARVCRISFSGELAYEINVPAWYGLNTWESV 812
Query: 135 EKIASDI-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
++ +T H LR G D T+ P DA M+ + +S K +IG
Sbjct: 813 AAAGAEFNITPYGTETMHVLRAEKGYPIVGQD-TDGTVTPQDAGMEWI--VSKAKD-FIG 868
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDL--PPSGSPILTDDIE 226
+ SR+ + RK + + D P G+ ++
Sbjct: 869 KRSYSRVDAQREDRKHLVSVLPVDRTLRLPEGTQLVEKGRS 909
>gi|78357039|ref|YP_388488.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219444|gb|ABB38793.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 367
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 93/280 (33%), Gaps = 55/280 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A L ++T ++ TL R +L QG IL ++ + D ++L ++ +
Sbjct: 66 LKGEGAREALSQVVTHNLATLAPGKCRYGFLLNEQGGILDDLIVYCLNTDEYMLVVNGAC 125
Query: 74 RDSLIDKLLFY---------KLRSNVIIEIQPINGVVL--------------SWNQEHTF 110
+S + + + + I++Q + + ++ T
Sbjct: 126 TESDFEWIQSHMPATAVLDDVSSATAKIDLQGPESLNVLEKCFARDFRSLGYFGFEQVTL 185
Query: 111 SNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ I R ++ A +L + + + LR+ G+
Sbjct: 186 DGACVIVSRTGYTGELGYEFYLPWTKALMLWELLLQDSRVQPAGLGARDTLRLEVGLPLY 245
Query: 157 NTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D + P +A + ++ YIG+ IR++ + +
Sbjct: 246 GQDLDAAHT-PAEAGY---GMMLKSEAAYIGK------GKDTQIREQLIPLIIRGRRSAR 295
Query: 217 GSPILT--DDIEIGTLG------VVVGKKALAIARIDKVD 248
+ I+T D E+G + V ALA + D
Sbjct: 296 HNDIVTLPDGREVGVVTSGSFAPSVGSAVALAYINAEYAD 335
>gi|93005636|ref|YP_580073.1| glycine cleavage system aminomethyltransferase T [Psychrobacter
cryohalolentis K5]
gi|92393314|gb|ABE74589.1| aminomethyltransferase [Psychrobacter cryohalolentis K5]
Length = 390
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLIS--KIEED 63
S+ + + G A +LQ ++ DV L A S +L +G I+ ++ +E
Sbjct: 60 SHMVIVDIKGTDAKAWLQKLLANDVDKLKTAGKALYSPMLNEEGGIIDDLIVYLSNSDET 119
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+ + + + RD + +
Sbjct: 120 EYRIVSNAATRDKDMAQFDK 139
>gi|56696446|ref|YP_166803.1| glycine cleavage system T protein, putative [Ruegeria pomeroyi
DSS-3]
gi|56678183|gb|AAV94849.1| glycine cleavage system T protein, putative [Ruegeria pomeroyi
DSS-3]
Length = 381
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G + Q I T ++ TLP +A+ P G ++ + ++ +D F
Sbjct: 51 LSALRKFEITGPDSEALCQYIFTRNMKTLPVGGVVYTAMCYPHGGMIDDGTVFRLGKDNF 110
>gi|160899760|ref|YP_001565342.1| glycine cleavage system T protein [Delftia acidovorans SPH-1]
gi|160365344|gb|ABX36957.1| glycine cleavage system T protein [Delftia acidovorans SPH-1]
Length = 391
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G A L++++ DVL L R +L G IL + + E+D F+
Sbjct: 72 SHMGQISLRGPDAGAALESLLPMDVLGLGEHRQRYGLLLNDAGGILDDLMFVRREDDLFL 131
Query: 67 LEIDRSKRDSLI 78
+ K + L
Sbjct: 132 IVNGACKHEDLA 143
>gi|114794040|pdb|2GAH|A Chain A, Heterotetrameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
Length = 965
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ GK A FL I T L R G I + ++ ED F+L
Sbjct: 635 IEIRGKDAAEFLNRIYTNGYTKLKVGXGRYGVXCKADGXIFDDGVTLRLAEDRFLLHTTT 694
Query: 72 SKRDSLIDKL 81
++D L
Sbjct: 695 GGAADVLDWL 704
>gi|71736224|ref|YP_276853.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556777|gb|AAZ35988.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 1006
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|320326401|gb|EFW82454.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330614|gb|EFW86592.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330985878|gb|EGH83981.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011737|gb|EGH91793.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 1006
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|315103175|gb|EFT75151.1| glycine cleavage system T protein [Propionibacterium acnes
HL050PA2]
Length = 371
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 34/317 (10%), Positives = 98/317 (30%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTW----------------GHNEKI 137
+ R + + G +
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFNKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + +TG +G ++ +D +G + + +A+A +D I
Sbjct: 286 DTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|289624811|ref|ZP_06457765.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|330871158|gb|EGH05867.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 1006
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|298489214|ref|ZP_07007233.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156296|gb|EFH97397.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 1006
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|224826871|ref|ZP_03699970.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002]
gi|224600858|gb|EEG07042.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002]
Length = 1005
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 54/268 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I + L R +L G ++ + + I +D F
Sbjct: 671 STLGKIDIKGPDAREFLNRIYSNAWTKLDPGKCRYGLMLDENGMVMDDGVTACIADDHFY 730
Query: 67 LEIDRSKRDSLIDKLLFY--------KLR-----------------SNVI-------IEI 94
+ +++ L + K+R S + I++
Sbjct: 731 MTTTTGGAARVLNWLERWHQTEWPELKVRFTSVTDHWSTTAVVGPKSRAVLQKLSSDIDL 790
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI--- 141
+ W E T + R S + L H W + +
Sbjct: 791 SADTFKFMDWR-EGTVAGVPARVCRISFSGELAYEINVDACYGHYIWEQVMEAGKEFGIT 849
Query: 142 ----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G + D ++ P D M G+ ++G+ +SR
Sbjct: 850 PYGTETMHVLRAEKGFIIVGQD-TDGSMSPIDLNMAWAVGMK-KPFSFLGKRSLSRSDTS 907
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + G+ IL+
Sbjct: 908 RSDRKQLVGLYTEDPKVVLAEGAQILSS 935
>gi|171056864|ref|YP_001789213.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix
cholodnii SP-6]
gi|170774309|gb|ACB32448.1| glycine cleavage T protein (aminomethyl transferase) [Leptothrix
cholodnii SP-6]
Length = 376
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 90/306 (29%), Gaps = 61/306 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A + +T +V L + + +L GK + +I + + F++
Sbjct: 58 VHVIGPHAEALINQAVTRNVSKLYPGKSVYACMLNEAGKFIDDCVIYRNGPNAFMVVHGA 117
Query: 72 SKRDSLIDK----LLFYKLRSNVIIEIQPINGVVLS----------------WNQEHTFS 111
+ ++ + L + + + G + + + T
Sbjct: 118 GQGHEILTRGAVGRNVAVLFDD-DLHDLSLQGPLAVEYLSRHVPGIRQLPYFHHLQTTLF 176
Query: 112 NSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRINHGI- 153
+ R + + + LR+ +
Sbjct: 177 GRPVMISRTGYTGERGYELFCKAADAPTIWDTIVAEGKAMGIVPCAFTALDWLRVESCLL 236
Query: 154 --VDPNTDFLPSTIFPH-----DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
N+D P P + +D +S K + G + R R+R I
Sbjct: 237 FYPYDNSDMYPMDGEPIGDTLWELGLDFT--VSPGKTEFRG----AAEHFRLQGRERFKI 290
Query: 207 I---TGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTV 259
+ + +G + D ++G + + +++AIAR+D G L +
Sbjct: 291 FGIELDSTEAAQAGDALYDGDTKVGFVTCGMYSRLSGRSMAIARMDTAYAV--PGRKLAL 348
Query: 260 HGVRVK 265
G +
Sbjct: 349 RGAALN 354
>gi|281353469|gb|EFB29053.1| hypothetical protein PANDA_009045 [Ailuropoda melanoleuca]
Length = 831
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 64/314 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS V G+ ++ L + + + S +LTP+G++ +S
Sbjct: 498 IDLSPFGKFNVKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 555
Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLFYKL 86
F+L + ++ KL L
Sbjct: 556 EFLLITGSGSELHDLRWIEEEAVNGGYNVEIKNITDELGVLGVAGPHARKVLQKLTTEDL 615
Query: 87 RSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137
+V + P+ + +S+ E + ++ ++ D +++ E+
Sbjct: 616 SDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDAIMN---AGQEEG 672
Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194
+ TY + LR+ ++ T P +A ++ I L K +IG++ + +I
Sbjct: 673 IDNFGTYAMNVLRLEKAFRAWGSEMNCDT-NPLEAGLEYF--IKLNKPADFIGKQALKQI 729
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKV 247
+ + + R+ + TDD+ P G+ I D +G + A A ++
Sbjct: 730 KAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELS 789
Query: 248 DHAIKKGMALTVHG 261
+ + L
Sbjct: 790 KVGQQVEVELLGKN 803
>gi|289650612|ref|ZP_06481955.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 1006
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGY 958
>gi|312794910|ref|YP_004027832.1| aminomethyltransferase [Burkholderia rhizoxinica HKI 454]
gi|312166685|emb|CBW73688.1| Aminomethyltransferase (EC 2.1.2.10) [Burkholderia rhizoxinica HKI
454]
Length = 413
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G A FL+ + ++ L A S +L G ++ ++ +D F
Sbjct: 93 SHMCVVDIAGAGARAFLRMALANNIDKLQTPGRALYSCMLNASGGVVDDLIVYYFADDAF 152
Query: 66 ILEIDRSKRDSLIDKL 81
+ ++ D I L
Sbjct: 153 RVVVNAGTADKDIGWL 168
>gi|56751803|ref|YP_172504.1| glycine cleavage system aminomethyltransferase T [Synechococcus
elongatus PCC 6301]
gi|81301117|ref|YP_401325.1| glycine cleavage system aminomethyltransferase T [Synechococcus
elongatus PCC 7942]
gi|61213229|sp|Q5N136|GCST_SYNP6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123728131|sp|Q31KT1|GCST_SYNE7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56686762|dbj|BAD79984.1| aminomethyltransferase [Synechococcus elongatus PCC 6301]
gi|81169998|gb|ABB58338.1| aminomethyltransferase [Synechococcus elongatus PCC 7942]
Length = 372
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 96/291 (32%), Gaps = 48/291 (16%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE-----EDTFILEIDRSKRDSL 77
LQ ++ +D+ TL A+ S +L G L ++ E F++ ++ + DS
Sbjct: 73 LQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLI-VNAATTDSD 131
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID------ERF----------- 120
L + + ++++ +V + + RF
Sbjct: 132 RLWLTEHLPPAIALLDLSQDLALVAIQGPQAIAFLQPLVSCDLAELPRFSHTVTSIAGQP 191
Query: 121 -------------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFL 161
A + L + + + LR+ + +
Sbjct: 192 AFVARTGYTGEDGCEVMLPPAAAITLWQQLTAAGVVPCGLGARDTLRLEAAMPLYGHELD 251
Query: 162 PSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL 221
T P +A + + + ++G++ + + + + R+ + ++ G P+
Sbjct: 252 TDT-NPLEAGLGWVVHLDRNPD-FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVA 309
Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
D +G + KA+A+A + + + + + + G +V A+
Sbjct: 310 IADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATV 360
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP 35
+ + + + G AI FLQ +++ D+ LP
Sbjct: 151 DLALVAIQGPQAIAFLQPLVSCDLAELP 178
>gi|154346172|ref|XP_001569023.1| aminomethyltransferase, mitochondrial precursor [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066365|emb|CAM44156.1| putative aminomethyltransferase, mitochondrial precursor
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 377
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 30/254 (11%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL-------L 82
DV + + G+ +G + +E L+ + +++ +
Sbjct: 124 DVAHMEEVLHEGAM----KG---ADVRLVPLERSLIALQGP--QAAAILSEFMDGVPDMD 174
Query: 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
F R V I+ + + E F ++ + ++ ++LL R A D
Sbjct: 175 FMHCRQKVKIKGMEVQVTRCGYTGEDGFEIAASDRDVATLVELLLSRKAELIGLGARDS- 233
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQEVVSRIQ---HRN 198
LR+ G+ + I P A LM ++ + +G +IG E + + +
Sbjct: 234 ----LRLEAGLGLYGHEMT-EDINPVAARLMWTISKRRMEEGGFIGYEAIKNFRDNASKG 288
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKG 254
+ + + + T + + I D ++G + L A+ +D+ A
Sbjct: 289 AVPRLRVGLVSTGPVAREKTVIEVDGKQVGEVTSGCPSPCLKKNIALGYVDRGLAAKGVK 348
Query: 255 MALTVHGVRVKASF 268
+ L V G RV A
Sbjct: 349 VDLVVRGRRVPAEV 362
>gi|48477575|ref|YP_023281.1| aminomethyltransferase [Picrophilus torridus DSM 9790]
gi|48430223|gb|AAT43088.1| aminomethyltransferase [Picrophilus torridus DSM 9790]
Length = 365
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 92/295 (31%), Gaps = 66/295 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISKI 60
S+ I + G A F D + + +A L GKI+ +I ++
Sbjct: 54 SHMGDIVIKGDDAAAF------CDYIFPGKISDMENGQCMYTAFLNNDGKIIDDTIIYRL 107
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------- 110
E F + + D + + + K V I+ N ++ +
Sbjct: 108 SEKRFFFIPNAANIDRIYNWVNSNKNDYKVEIKNYSYNISHIAIQGPDSLKILDEMGIKY 167
Query: 111 ------------------SNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY- 144
++S I + N E++ IK Y
Sbjct: 168 PGEFKFNYHNTESYNDVSEDNSIIVSGTGYTGEIGVEIIVPNKDATILWEELIKKIKDYY 227
Query: 145 ---------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
LR+ G++ DF P++A + + + +IG+E + + +
Sbjct: 228 GKPCGLGSRDTLRMEKGMLLSGQDFNEDRT-PYEASISFIINYNHD---FIGKEALIKNR 283
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDK 246
+ R I+ G + +P I+ ++ +G + + + + I K
Sbjct: 284 NEYNEVFRGFILNGRN-IPRQNCDIIYNNKVVGRISSGSYSPSLNRGIGLGYIKK 337
>gi|148273381|ref|YP_001222942.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|147831311|emb|CAN02267.1| putative aminomethyltransferase (Glycine cleavage system T protein)
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 406
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 70/194 (36%), Gaps = 29/194 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + I V G+ A FL +++ + + A+ + +L P G I+ ++ + E++F+
Sbjct: 66 SHMAEIAVEGEGAAAFLDSVLAGKLSAIAEWQAKYTLLLDPSGGIVDDLIVYRTGEESFL 125
Query: 67 LEIDRSKRDSLIDKLLFYKL-RSNVIIEIQPINGVVLSWNQ-------EHTFSNSS---- 114
+ + D ++ L R +V ++ + +++ E T +
Sbjct: 126 VVANAGNHDPVLAVLAEAAAGRDDVEVDDASDDVALIAVQGPVSRAILEATAGLETETPL 185
Query: 115 -------FIDERFSIADVLLHRTWGHNE-------KIASDIKTYHELRINHGIVDP--NT 158
RF+ DVL+ RT E + + L + G NT
Sbjct: 186 EALRYYRATAARFAGQDVLVARTGYTGEDGYELYVATEDAVALWEAL-VAAGTPLGLLNT 244
Query: 159 DFLPSTIFPHDALM 172
+A M
Sbjct: 245 GLACRDTLRLEAGM 258
>gi|63002613|dbj|BAD97818.1| subunit alpha of sarocosine oxidase [Corynebacterium sp. U-96]
Length = 965
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ GK A FL + T L + R + G I + ++ ED F+
Sbjct: 630 STLGKIEIRGKDAAEFLNRMYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFL 689
Query: 67 LEIDRSKRDSLIDKL 81
+ ++D L
Sbjct: 690 MHTTTGGAADVLDWL 704
>gi|71041783|pdb|1VRQ|A Chain A, Crystal Structure Of Heterotetrameric Sarcosine Oxidase
From Corynebacterium Sp. U-96 In Complex With Folinic
Acid
gi|71041933|pdb|1X31|A Chain A, Crystal Structure Of Heterotetrameric Sarcosine Oxidase
From Corynebacterium Sp. U-96
gi|304445717|pdb|3AD7|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium
Sp. U-96 In Complex With Methylthio Acetate
gi|304445721|pdb|3AD8|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium
Sp. U-96 In Complex With Pyrrole 2-Carboxylate
gi|304445725|pdb|3AD9|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium
Sp. U-96 Sarcosine-Reduced Form
gi|304445729|pdb|3ADA|A Chain A, Heterotetrameric Sarcosine Oxidase From Corynebacterium
Sp. U-96 In Complex With Sulfite
Length = 964
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ GK A FL + T L + R + G I + ++ ED F+
Sbjct: 629 STLGKIEIRGKDAAEFLNRMYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLRLAEDRFL 688
Query: 67 LEIDRSKRDSLIDKL 81
+ ++D L
Sbjct: 689 MHTTTGGAADVLDWL 703
>gi|326677478|ref|XP_002665871.2| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Danio
rerio]
Length = 899
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 95/282 (33%), Gaps = 61/282 (21%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS +KV G + L ++ TLP + TP+G++ ++ +
Sbjct: 568 IDLSPFGKMKVTGADSERLLDRLLAN---TLPKVKHTHTHKHTPRGRVYAELTVTHTQPG 624
Query: 64 TFILE------------IDRSKRD-------------------------SLIDKL----- 81
F+L I+R D +++ KL
Sbjct: 625 EFLLITGSGSELHDLRWIEREAADGGYDVCVTNVTDEIGVLGIAGPKSRTVLQKLTSADL 684
Query: 82 -----LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136
F + R IE+ + V ++D R A G +E
Sbjct: 685 SESSFRFLQCR---TIELXXVCVCVCVCVCTGELGWELYMDMRNMSAVYQALMEAGRDEN 741
Query: 137 IASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSR 193
I D TY + LR+ G + T P +A +D I L K +IG++ +
Sbjct: 742 I-DDFGTYAMNSLRLEKGFRAWGAEMNCDT-NPLEAGLDYF--IKLNKPADFIGKQALLE 797
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234
I+ + + R+ + TDD+ P G+ + + +G
Sbjct: 798 IKAQGLSRRLAFLTLNTDDIDPEGNESVWHNGEVVGNTTSGS 839
>gi|241204812|ref|YP_002975908.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858702|gb|ACS56369.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 378
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 52/283 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ + +++
Sbjct: 71 EDAALALESLVPVDILGLGEGRQRYGFFTDDTGCILDDLMIAHV-DDHLFVVVNAACKEA 129
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + + +I +Q V + + F+D R
Sbjct: 130 DVAHLQAHISDQCDITVLDRALIALQGPRAVAVLAELWADVAAMKFMDVRHCRLHDVSCL 189
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A + R H + A + LR+ G+ D
Sbjct: 190 VSRSGYSGEDGFEISIPSDKAVDVTKRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G G + G + R+R + + P G
Sbjct: 250 TTS-PVEAALEWAMQKARRGSGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307
Query: 218 -SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHA 250
+ + TD EIG + V G A+ ++
Sbjct: 308 HAKLYTDAEGKIEIGEVTSGGFGPSVEGPVAMGYVQLSHAAAG 350
>gi|126740173|ref|ZP_01755862.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
gi|126718628|gb|EBA15341.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. SK209-2-6]
Length = 811
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 87/317 (27%), Gaps = 66/317 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQG-------------------KIL 52
I++ G FL + V +L G +I
Sbjct: 490 IEITGTDRHSFLGRMFCTKVTQ-KPGRVGLGYLLNHHGMVKGEATLANLPASDRGPERIW 548
Query: 53 L----------------------YFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90
I + D IL + + ++ +
Sbjct: 549 YGSAAASELHDMDWLCQHIQPGEDVQIRSLTNDQTILVLAGPRARDVLSRAARGDWSRQA 608
Query: 91 I---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
I I P + +S++ E + + A L +
Sbjct: 609 FPWLSARECFIGIAPATVLGVSFSGELAY-EIHVPNASLYAAYQALCEAGKEHGLQLFGA 667
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ +R+ G + D L P++ ++ + KG +IG+ + R +
Sbjct: 668 RAVDSMRMEKGFLHWKADLLTE-FDPYETGLERF--VHPDKGDFIGKPALMEHLQRGPRK 724
Query: 202 KRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKG 254
K + + +P G+ ++ + IGT+ G LA A +D I
Sbjct: 725 KLVTLKIASTSMPAHGGASLMLGEEVIGTVTS--GDWGHRTGLNLAYAFVDPAQAEIGNT 782
Query: 255 MALTVHG--VRVKASFP 269
+ L G V + P
Sbjct: 783 LQLDACGERVPAEVIVP 799
>gi|255505305|ref|ZP_05345308.3| putative glycine cleavage system T protein [Bryantella
formatexigens DSM 14469]
gi|255268690|gb|EET61895.1| putative glycine cleavage system T protein [Bryantella
formatexigens DSM 14469]
Length = 343
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 69/295 (23%)
Query: 5 YLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT----PQGKILLYFLISKI 60
Y +++ I+V G A+ L+ + + L + + +LT PQ +I++
Sbjct: 34 YFTHR-LIEVTGADALVLLERLYPCRISKLDITKGKYTMLLTEEGIPQ----DDCVITRQ 88
Query: 61 EEDTFI---LEIDRSKR-------------DSLIDKLLFYKL---RSNVIIEIQPINGVV 101
E T+ L + R R + + K+ Y + R+ ++E + V
Sbjct: 89 GETTYWISTLHVPRIMREMENASDGLDAKWEEITKKIDMYAVQGPRAEEMVE--QLLEVN 146
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHG--IVDPNTD 159
+ + D I T +I D+K ++ + +
Sbjct: 147 PHGQKRFQMVENRLGD--IQIKAAKGGYTGEKGYEIYCDVKDTEAVKQMLCAEVGKYGGE 204
Query: 160 FLPS---------------------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
F+ P + MD + I TK ++G++ V + +
Sbjct: 205 FVDEFDVIAYTLATEAGLYLVTDFDDATPFETGMDWM--IDWTKEEFLGRDAVLAAKDQ- 261
Query: 199 IIRKRPMIITGTDDLP-----PSGSPILTDDIEIGTLG------VVVGKKALAIA 242
++K+ + IT D P G+ + + EIG + V +A+
Sbjct: 262 PMKKKLVGITVDDPNVKVHGGPYGAVVSKNGKEIGRVTKFTYGFTVGKWVGMALI 316
>gi|257076373|ref|ZP_05570734.1| aminomethyltransferase [Ferroplasma acidarmanus fer1]
Length = 368
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 14/176 (7%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G + ++ I + + L +A L P G ++ +I ++ + F
Sbjct: 56 SHMGDIVISGPGSDNYVDYIFPSRISLLKNNECMYTAFLNPSGNMIDDTIIYRLSGEKFF 115
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL 126
L + S D + ++ K +V IE ++ + + F
Sbjct: 116 LIPNASNIDKIYKWMIDNKKDYDVTIENYSNIISHIAVQGPKSVDVLKNLGMEFPEQFKF 175
Query: 127 LHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPST----IFPHDALMDLLNGI 178
L+ SD K Y+ + + I+ T + I P++ D+ N +
Sbjct: 176 LY----------SDAKKYNAITGKNEIIISGTGYTGEKGVELIVPNELAADMWNSV 221
>gi|126737341|ref|ZP_01753076.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
gi|126721926|gb|EBA18629.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
Length = 367
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 94/307 (30%), Gaps = 59/307 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL---- 67
+++ G A QAI D+ + + + +G ++ ++ K++ED F L
Sbjct: 64 VQLKGPDAAKLAQAISARDLSKCQIGQGKYAPVCNYKGTVINDPVVMKLDEDLFWLSIAD 123
Query: 68 -------------------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH 108
D + ++ ++V+ E ++ + W +E
Sbjct: 124 SDIWLWSTAIGAERGLDVEICDPGVSPMALQGPRAEEVVADVLGEW--VHNIRYFWFKET 181
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT----------------YHELRINHG 152
+ +R + + + + + R G
Sbjct: 182 QVEGIPIVVQRAGYSKQGGFEIYLRDSSKGTALWNIFKEAGQPYGIGPGSPQTAERTESG 241
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
++ +D +T P + + I L G +G + +I R + ++ D
Sbjct: 242 LLSVGSD-TDATTNPFEVRLGKFTDIDLE-GDVVGLPALRQISEAGPKRHQLGLVLEGKD 299
Query: 213 LPPSG---SPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTV--HG 261
P G I D ++G + + A+ + G + V +G
Sbjct: 300 PAPLGFTWDEIYKDGAKVGDMTNCIWSPRMKANIGYALI-----SADLMPGQEVAVVRNG 354
Query: 262 VRVKASF 268
V V A+
Sbjct: 355 VSVSANL 361
>gi|15965302|ref|NP_385655.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
meliloti 1021]
gi|15074482|emb|CAC46128.1| Probable aminomethyltransferase (glycine cleavage system T protein)
[Sinorhizobium meliloti 1021]
Length = 379
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L+ ++ ADVL L R G IL +I D L ++ + +D+
Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129
Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113
+ L L +I +Q P G VL W E +
Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVTEADLHDV 187
Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
S I R R H + + + LR+ G+ D
Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247
Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+T P +A ++ G + G + + R+R + + P
Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAGRILAELTDGVSRRR-VGLRPEGRAP 305
Query: 215 PSG-SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G + + D+ GT+ V G A+ + + + + + +
Sbjct: 306 VRGNANLFADEEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365
Query: 265 KAS 267
+
Sbjct: 366 AVT 368
>gi|18645112|gb|AAL76413.1| glycine cleavage system T protein, putative [uncultured marine
proteobacterium]
Length = 774
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + +CG A FL ++ + IA + L+ G+IL ++++ +
Sbjct: 452 IDLTGFAKYDICGTDAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 510
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120
F L S +D L ++ S V I GV+ + + D
Sbjct: 511 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 569
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ W ++ I LRIN+ + + + P AL D + G
Sbjct: 570 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 623
Query: 181 TKG 183
+G
Sbjct: 624 DQG 626
>gi|330993209|ref|ZP_08317146.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759760|gb|EGG76267.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 377
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 66/320 (20%)
Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ +++ G+ A L+ ++ AD++ L R + TP G I +++ +
Sbjct: 54 SHMGQVRIRPKSGRNTDAARALETLVPADIVALRPGRQRYALFTTPDGGISDDLMVANMG 113
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
E +L ++ + + + + + + +E+ ++ + +S + R
Sbjct: 114 E-WLLLVVNAACKQADFAHV--HAALAQTCTVEMLDGRALMALQGPAAEVALASL-NPRA 169
Query: 121 SIADVL-------------------------------------LHRTWGHNEKIASDIKT 143
+ + + + +
Sbjct: 170 AGMRFMDVVEMELAGMACIISRSGYTGEDGYEIGMASGDALTVARALLACPDVAPAGLGA 229
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLL-------NGISLTKGCYIGQEVVSRIQH 196
LR+ G+ D T P +A ++ G+ G Y G +V+
Sbjct: 230 RDSLRLEAGLCLYGADIDL-TTTPVEAALEWSIQKSRKPGGV--RAGGYPGAAIVADQLA 286
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARIDKV 247
R+R + G+ + D+ +G + G A+ D
Sbjct: 287 DGTTRRRVGLRAEGRAPVRGGTDLFADEAGAQPVGRVTSGAFGPSAGGPVAMGYVAADHA 346
Query: 248 DHAIKKGMALTVHGVRVKAS 267
+ A+ + V+ S
Sbjct: 347 GVGTRLFAAVRGRLLPVQVS 366
>gi|1346121|sp|P49363|GCST_FLAPR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438005|emb|CAA81077.1| T protein [Flaveria pringlei]
Length = 407
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + GK +PFL+ ++ ADV L + +G + +I+K+
Sbjct: 79 SLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVT 138
Query: 62 EDTFILEIDRSKRDSLIDKL 81
+D L ++ RD + +
Sbjct: 139 DDHIYLVVNAGCRDKDLAHI 158
>gi|254462442|ref|ZP_05075858.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2083]
gi|206679031|gb|EDZ43518.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium HTCC2083]
Length = 799
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 100/311 (32%), Gaps = 64/311 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q + T ++ TL +A+ G ++ + ++ +D F
Sbjct: 468 LSPLRKFEITGPDAEALCQYVFTRNMKTLAIGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 527
Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEH- 108
+ + DKL + V ++ V + W H
Sbjct: 528 RWIGGNDYGGEWIREQADKLGLKVM---VRSSTDQLHNVAVQGPESRDLLKKIVWTAPHN 584
Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT-YHE---- 146
S + F+ R L + H + A + +
Sbjct: 585 PEFEQLEWFRHTPARLNDESGTPFVVSRTGYTGELGYEVMCHPKDCAEIWQAIWDAGQEH 644
Query: 147 ------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+RI G++ + DF T P +A + + +IG++ + R
Sbjct: 645 GIKPMGLEALDMVRIEAGLIFADYDFSDQTD-PFEAGIGFTVPLKSKTDDFIGRDALIR- 702
Query: 195 QHRNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDH 249
+ ++ + + ++ G I +IG + + K +A+AR+D
Sbjct: 703 -RKETPARKLVGLEIDSNVDVEHGDCIHVGRAQIGEVTSSMRSPLLGKNIAMARVDVAHS 761
Query: 250 AIKKGMALTVH 260
A+ G AL V
Sbjct: 762 AV--GTALEVG 770
>gi|301382406|ref|ZP_07230824.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
Max13]
gi|302061201|ref|ZP_07252742.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
K40]
gi|302132427|ref|ZP_07258417.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 1006
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958
>gi|213967770|ref|ZP_03395917.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
T1]
gi|213927546|gb|EEB61094.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
T1]
Length = 1006
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPVDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958
>gi|183222533|ref|YP_001840529.1| glycine cleavage system aminomethyltransferase T [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189912568|ref|YP_001964123.1| glycine cleavage system aminomethyltransferase T [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|259647539|sp|B0SQA1|GCST_LEPBP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|259647540|sp|B0SGN8|GCST_LEPBA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|167777244|gb|ABZ95545.1| Aminomethyltransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780955|gb|ABZ99253.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 370
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 87/293 (29%), Gaps = 54/293 (18%)
Query: 7 SNQSFIKVCGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ I V G + FL+++ + T+ + +A++ G ++ + K +
Sbjct: 51 SHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTK 110
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS------------- 111
+++ + S +++ LL Y ++ NV I N ++ +
Sbjct: 111 YMICSNASNFEAVTQHLLKY-VKGNVSIANDSKNWHQIALQGPKADAIFTKYLGKDLSSI 169
Query: 112 -----------NSSFIDERFSIAD----------VLLHRTWGHNEKIASD-------IKT 143
+ I R L W +I D +
Sbjct: 170 LYYHFEEMNWRGETIIVSRTGYTGEDGFEIYTSNALGVTLWKELLEIGKDFGLVPVGLGA 229
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ + + P ++ ++ + + Y+G + + + K
Sbjct: 230 RDTLRLEAKYPLYGHEL-NAEWTPVESGINFI--VKEKSKPYLGYDRIIADKKNGPKSKV 286
Query: 204 PMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDH 249
+ + PI D EIG LAI + + +
Sbjct: 287 VGVRLLEPGVLRENFPIFAADGKEIGKTTSGTHSPSRKESLGLAILQTEFAKN 339
>gi|40063518|gb|AAR38318.1| oxidoreductase, FAD-binding [uncultured marine bacterium 581]
Length = 805
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 11/183 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ L+ + +CG A FL ++ + IA + L+ G+IL ++++ +
Sbjct: 483 IDLTGFAKYDICGTDAESFLNRVLANRMPKRDGGIA-LAHFLSRNGRILGEATVTRVTSE 541
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS--NVIIE-IQPINGVVLSWNQEHTFSNSSFIDERF 120
F L S +D L ++ S V I GV+ + + D
Sbjct: 542 HFYLLSAASAEMRDLDHLTQ-QVESGEQVTIRNTTDERGVLALVGPKSRDVLAKLTDAPL 600
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ W ++ I LRIN+ + + + P AL D + G
Sbjct: 601 DNENFR----WRSSQDIEISGMKVRALRINY-VGELGWELHPKME-DLSALYDAVWGAGQ 654
Query: 181 TKG 183
+G
Sbjct: 655 DQG 657
>gi|317047927|ref|YP_004115575.1| glycine cleavage T protein [Pantoea sp. At-9b]
gi|316949544|gb|ADU69019.1| glycine cleavage T protein (aminomethyl transferase) [Pantoea sp.
At-9b]
Length = 391
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 95/292 (32%), Gaps = 59/292 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + + +AD+ + + + +L G + + E +
Sbjct: 47 SHMSIVSVVGDDAWSLVNHLASADISIIRDEQGIYTLLLNEDGSVWGDAYMLCTAE-GYY 105
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF---------------- 110
+ + +I++L L + ++IQ I + QE
Sbjct: 106 ILSESLSSGEVIERLKC-ILENREDLDIQEIPEINALEAQEWGAILLEGPYAWELLSEIY 164
Query: 111 --------------SNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------- 142
++ + R + G +K+ K
Sbjct: 165 GFDIIGLPYHEYMNTDDGLMTFRCGRHGEFSYLVVGEQQKLVGVWKQLVDKGDKYQLKIA 224
Query: 143 --TYHEL-RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
Y ++ RI + D + + T P + M I K +IG+ V I
Sbjct: 225 GLDYQQIVRIENPCWDASI-YQNYTRNPLELQMQW--AIQYDKESFIGKSAVEAFSRSGI 281
Query: 200 IRK--RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARID 245
RK M + G D+ + S +L D +++G + A +A+A ID
Sbjct: 282 ERKLVGIMPVAGCSDI-AADSKVLVDGVQVGVIVKGGYSPARQSYIALALID 332
>gi|221639104|ref|YP_002525366.1| Sarcosine oxidase subunit alpha family [Rhodobacter sphaeroides
KD131]
gi|221159885|gb|ACM00865.1| Sarcosine oxidase, alpha subunit family [Rhodobacter sphaeroides
KD131]
Length = 993
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 53/261 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + +LP + R + G ++ ++ ++ ED+++
Sbjct: 660 STLGKILVKGPDAGRFLDMLYTNVMSSLPVRRCRYGLMCNENGFLMDDGVVVRLSEDSWL 719
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNVII---------------EIQ 95
D + + + + V I ++
Sbjct: 720 CHTTSGGADRIHAHMEDWLQCEWWDWQVYTANLTEQFAQVAIVGPNARLLLEKLGGMDVS 779
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------------- 139
+ W E T + R S + L + + +
Sbjct: 780 KEALPFMHWA-EGTIAGIPARVFRISFSGELSYEVAVPAGQGLAFWQACLEAGAEFGLMP 838
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D + IS K +IG+ + R +
Sbjct: 839 YGTEALHVMRAEKGFIMIGDE-TDGTVVPQDLNLGW--AISKKKADFIGKRGMERTFLSS 895
Query: 199 IIRKRPMII-TGTDDLPPSGS 218
R + + + T + P G+
Sbjct: 896 PDRWKLVGLETLDGSVLPDGA 916
>gi|119962346|ref|YP_949678.1| glycine cleavage system aminomethyltransferase T [Arthrobacter
aurescens TC1]
gi|119949205|gb|ABM08116.1| glycine cleavage system T protein [Arthrobacter aurescens TC1]
Length = 373
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59
LS+ + V G A FL D + + A+ S I G I+ + +
Sbjct: 50 LSHMGEVWVSGPDAAAFL------DYALVGKLSAIAVGKAKYSLICNADGGIIDDLISYR 103
Query: 60 IEEDTFILEIDRSKR----DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
ED +++ + +L+ + + +V++E +++ +
Sbjct: 104 RAEDKYLVVPNAGNAKVVSAALLKRAAGF----DVVVEDVSAETSLIAVQGPTAEA 155
>gi|114570761|ref|YP_757441.1| glycine cleavage system T protein [Maricaulis maris MCS10]
gi|114341223|gb|ABI66503.1| glycine cleavage system T protein [Maricaulis maris MCS10]
Length = 365
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 101/304 (33%), Gaps = 47/304 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G A L+A++T D+ + + + + +G I ++S+ + +
Sbjct: 54 SHMGQARYVGDEAA--LEALLTCDLSEIGAGEQKYTLLPNERGGIRDDLMVSRPDGNGIY 111
Query: 67 LEIDRSKRDSLIDKL--------LFYKLRSNVIIEIQP---------------------- 96
L ++ + +D+ + ++ ++ +Q
Sbjct: 112 LVVNAATKDADFAHIEAATAGKGTLTRIPERALLALQGPAAKDVMARLCPQACKMVFMQC 171
Query: 97 ----INGVVLSWNQEHTFSNSSF-IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
++GV + ++ F I + AD + +E A + LR+
Sbjct: 172 GLFTLDGVEVMMSRSGYTGEDGFEISIPEADADRIARLLLAQDEVAAIGLGARDSLRLEA 231
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G+ D + +L+ L +G + G +V++ +KR + +T T
Sbjct: 232 GLCLYGHDMDENRTAVEASLIWALAKTRRERGDFPGADVIATQIEEKTCQKR-VGLTLTG 290
Query: 212 DLPPSGSPILT-DDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G+ I IG + V G A+ D+ A + + V G
Sbjct: 291 APAREGAEIADKSGNIIGIVTSGGFGPTVSGPVAMGYV--DRDFMAPGTEVDILVRGKPR 348
Query: 265 KASF 268
A
Sbjct: 349 AAII 352
>gi|13473169|ref|NP_104736.1| aminomethyltransferase [Mesorhizobium loti MAFF303099]
gi|14023917|dbj|BAB50522.1| aminomethyltransferase [Mesorhizobium loti MAFF303099]
Length = 419
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 57/273 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A FL + DV L +A +G +L + ++ F L
Sbjct: 88 RIEGPDAEAFLDRVTLRDVTRLRPGRVHYTAWCDDEGFVLDDGTLFRLSPTRFRLCSQER 147
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS--------------------- 111
L+D + + +V +E + L+ +F+
Sbjct: 148 HLPWLLDSAIGF----DVTVEEETEAVAGLALQGPTSFAVLREAGFAGVEKLKVFDLADF 203
Query: 112 ---NSSFIDERFSIADVLLHRTWGHNEKI-----------------ASDIKTYHELRINH 151
+++ I R L + + +K A + R+
Sbjct: 204 PHDDTTVIISRTGFTGDLGYELFVPADKALSLWDRLMTAGELRGIRAVGYTALNRARLEA 263
Query: 152 GIVDPNTDFLPSTIF--------PHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G++ N DF + P + + + I K + G+ V + + +R
Sbjct: 264 GLIVANADFTTAGHAIRADRLRKPDEIGLGFM--IDPEKTHFNGRRAVLEARAKRKLRHV 321
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
+ + ++P + + + +G+V G
Sbjct: 322 LVGLEIEGNIPAEHAMVYH--KKHQEVGLVSGA 352
>gi|301769829|ref|XP_002920333.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 866
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 64/314 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS V G+ ++ L + + + S +LTP+G++ +S
Sbjct: 532 IDLSPFGKFNVKGQDSVRLLDHLFANVIPKV--GFTNISHMLTPKGRVYAELTVSHQTPG 589
Query: 64 TFILE-------------------------------------IDRSKRDSLIDKLLFYKL 86
F+L + ++ KL L
Sbjct: 590 EFLLITGSGSELHDLRWIEEEAVNGGYNVEIKNITDELGVLGVAGPHARKVLQKLTTEDL 649
Query: 87 RSNV---------IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137
+V + P+ + +S+ E + ++ ++ D +++ E+
Sbjct: 650 SDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDAIMN---AGQEEG 706
Query: 138 ASDIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194
+ TY + LR+ ++ T P +A ++ I L K +IG++ + +I
Sbjct: 707 IDNFGTYAMNVLRLEKAFRAWGSEMNCDT-NPLEAGLEYF--IKLNKPADFIGKQALKQI 763
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKV 247
+ + + R+ + TDD+ P G+ I D +G + A A ++
Sbjct: 764 KAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELS 823
Query: 248 DHAIKKGMALTVHG 261
+ + L
Sbjct: 824 KVGQQVEVELLGKN 837
>gi|50842231|ref|YP_055458.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes KPA171202]
gi|59797725|sp|Q6A9R6|GCST_PROAC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|50839833|gb|AAT82500.1| glycine cleavage system protein T [Propionibacterium acnes
KPA171202]
gi|315107064|gb|EFT79040.1| glycine cleavage system T protein [Propionibacterium acnes
HL030PA1]
Length = 371
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 34/317 (10%), Positives = 98/317 (30%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTW----------------GHNEKI 137
+ R + + G +
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + +TG +G ++ +D +G + + +A+A +D I
Sbjct: 286 DTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|284991325|ref|YP_003409879.1| sarcosine oxidase subunit alpha family protein [Geodermatophilus
obscurus DSM 43160]
gi|284064570|gb|ADB75508.1| sarcosine oxidase, alpha subunit family [Geodermatophilus obscurus
DSM 43160]
Length = 955
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 55/266 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A L + T + +L R + G ++ + ++ ED F+
Sbjct: 618 STLGKIDVQGPDAAVLLDRLYTNLMSSLKVGSVRYGVMCGVDGMVIDDGTVLRLAEDRFL 677
Query: 67 LEIDRSKRDSLIDKLLFYK------LR--------------------SNVI------IEI 94
+ ++D + + LR +V+ +++
Sbjct: 678 VLTTTGGAAKILDWMEEWAQTEWPDLRVHCTSVTEQWVTFPVVGPRSRDVVGAVFPHVDV 737
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS--------------- 139
++W + T R S + L + + + +
Sbjct: 738 SAEAFPFMTWR-DTTLDGVPVRLARISFSGELAYEVYVNPWYAVAVWQRLLDAGRPYGIT 796
Query: 140 --DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G D T+ PHD M +S K ++G+ +R +
Sbjct: 797 PYGTETMHVLRAEKGYPIIGQD-TDGTVTPHDLGMAW--AVSKKKPDFVGKRSFARPANA 853
Query: 198 NIIRKRPMIITGTD--DLPPSGSPIL 221
+ +RK+ + + D + P GS I+
Sbjct: 854 DPLRKQLVGLLPVDRQTVLPEGSQII 879
>gi|314923261|gb|EFS87092.1| glycine cleavage system T protein [Propionibacterium acnes
HL001PA1]
Length = 371
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 33/317 (10%), Positives = 96/317 (30%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAMKIVLAALQKGNTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ +D +G + + +A+A +D I
Sbjct: 286 DTTADRVLVGVAGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|282854272|ref|ZP_06263609.1| aminomethyltransferase [Propionibacterium acnes J139]
gi|282583725|gb|EFB89105.1| aminomethyltransferase [Propionibacterium acnes J139]
gi|314967027|gb|EFT11126.1| glycine cleavage system T protein [Propionibacterium acnes
HL082PA2]
gi|314980984|gb|EFT25078.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA3]
gi|315091643|gb|EFT63619.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA4]
gi|315093051|gb|EFT65027.1| glycine cleavage system T protein [Propionibacterium acnes
HL060PA1]
gi|327327847|gb|EGE69623.1| glycine cleavage system T protein [Propionibacterium acnes
HL103PA1]
Length = 371
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 33/317 (10%), Positives = 96/317 (30%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKGNTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ +D +G + + +A+A +D I
Sbjct: 286 DTTADRVLVGVAGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKI 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|254466550|ref|ZP_05079961.1| aminomethyltransferase [Rhodobacterales bacterium Y4I]
gi|206687458|gb|EDZ47940.1| aminomethyltransferase [Rhodobacterales bacterium Y4I]
Length = 378
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 68/306 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G A + T +V + + + +L GK + +I ++ +++++
Sbjct: 59 VHIVGPHASHVIDRATTRNVEKIKPGRSTYACMLNDDGKFVDDCVIYRMGPNSWMVVHGS 118
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQP-----------------------INGVVLSWNQEH 108
+ ++L +V I I VV +
Sbjct: 119 GQG---HEQLTMAAQGRDVDIRFDDNLHDISLQGPLAVDFLEEQGVPGIRDVVYFSHIHT 175
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP-------NTDFL 161
T + R + + + + L + G D L
Sbjct: 176 TLFDKPVTISRTGYTGERGYEIFCRGQDAPH---IWDNL-VEKGAPMGIIPTRFTTLDLL 231
Query: 162 PSTIFPHDALMDLLN----------------GISLT----KGCYIGQEVVSRIQHRNIIR 201
+ + D G+ T K + G E R++ + +
Sbjct: 232 RAESYLLFFPFDNSEMYPFENEKCGDTLWELGLDFTVSPGKTGFRGAEEHYRLKGKERFK 291
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGM 255
+ + GT+ G+P+L D ++G + + +A +D + GM
Sbjct: 292 IYGVKLEGTEP-AEEGAPLLRDGKQVGVVTIGMYSPLNEHNVGIARMPVDCAE----PGM 346
Query: 256 ALTVHG 261
LTV
Sbjct: 347 PLTVKN 352
>gi|209551592|ref|YP_002283509.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537348|gb|ACI57283.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 816
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 80/278 (28%), Gaps = 56/278 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
+ G+ A L I + DV P + +L +G I +++I ED + +
Sbjct: 496 LKGRDAEAALSWIASNDVAR-PVGSLIYTQMLNDKGGIECDLTVARIAEDEYYIVTGTGF 554
Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106
I L+D Y + R+ V ++ + Q
Sbjct: 555 ATHDFNWIARNIPAEMHAELVDVTSSYCVLSLMGPNARAVLEKVTGS--DVSNAAFPFGQ 612
Query: 107 EHT--FSNSSFIDERFSIADVLLHRT-----------------WGHNEKIASDIKTYHEL 147
T S R + L + G + + +
Sbjct: 613 VRTIGISGCPVRALRITYVGELGYELHVPIEYATTVYDLLMASGGKLGLVNAGYRAIESC 672
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ G +D P P +A + + + K + G+E + R + ++
Sbjct: 673 RLEKGYRAWGSDIGPDHT-PVEAGLGW--AVKIRKSIPFRGREAIERQLKEGVKKRLACF 729
Query: 207 ITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALAIAR 243
+ D G I + +G L G + +
Sbjct: 730 VPEDPDTVLLGRETIYRNGKRVGWLSS--GGFGYTLGK 765
>gi|83952528|ref|ZP_00961259.1| putative oxidoreductase protein [Roseovarius nubinhibens ISM]
gi|83836201|gb|EAP75499.1| putative oxidoreductase protein [Roseovarius nubinhibens ISM]
Length = 791
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 84/278 (30%), Gaps = 44/278 (15%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ + LS + I + G + L + TA + +P A S IL P+G I + +S++
Sbjct: 469 ALIDLSPFTKIDLRGPNVAQALNDLCTAQMD-VPLGRAIYSQILNPRGGIEMDVTVSRLA 527
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF----------- 110
ED F + + R + L L S V + + L
Sbjct: 528 EDHFHITSGAATRARDLAYLRR-ALPSAVTLTDRTEAYCTLGVMGAGAAHMLRAWDADTA 586
Query: 111 ----SNSSFID-------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------ 147
D R + + W + + + L
Sbjct: 587 WAAAPLGELRDLLIDGHRARATRISFVGEYGWELTLPNSIAPRVFDRLYTAGARPLGHFA 646
Query: 148 ----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
RI G D P+ I P +A + I K + G+E ++ Q + + R+
Sbjct: 647 LDGCRIEKGFKHWGHDLSPA-ITPLEAGLGFT--IDWRKS-FTGKEALAAQQSQGLRRRL 702
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
++ L P+ +G +
Sbjct: 703 LLLQVTGAPLLLHDEPVFEAGRHVGFTTSGARGPRTGL 740
>gi|149374584|ref|ZP_01892358.1| sarcosine dehydrogenase [Marinobacter algicola DG893]
gi|149361287|gb|EDM49737.1| sarcosine dehydrogenase [Marinobacter algicola DG893]
Length = 856
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADV-LTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ LS+ + + G A L+ + A V T+P+ + L +G I I + +
Sbjct: 511 INLSHFAIFDISGDDAETLLEYLSVAKVGGTIPHGKGVYTHFLDARGGIRSDLTIIRRGD 570
Query: 63 DTFILEI 69
+ + +
Sbjct: 571 NDYRVVC 577
>gi|302555895|ref|ZP_07308237.1| sarcosine oxidase oxidoreductase [Streptomyces viridochromogenes DSM
40736]
gi|302473513|gb|EFL36606.1| sarcosine oxidase oxidoreductase [Streptomyces viridochromogenes DSM
40736]
Length = 1079
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 85/291 (29%), Gaps = 60/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TL + R + P G + + ++ D F
Sbjct: 745 STLGKIDVQGPDADVFLDLLYTNMMSTLKVGMIRYGVMCRPDGMVFDDGTVIRLARDRFT 804
Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQE------------- 107
+ +++D + + +LR + + V L +
Sbjct: 805 VTTTTGNAAAVLDWMEEWLQTEWPELRVHCTSVTEQWATVALVGPKSREVLGLLAPRLAV 864
Query: 108 --HTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146
F ++ D + D + R E + +
Sbjct: 865 ANDDFPFMAWRDTTVAGIDARVCRISFSGELAYEINVSPWEALTLWEALHEAGAPYGITP 924
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G D T+ P D M+ + +S K +IG+ +R
Sbjct: 925 YGTETMHVLRAEKGYPIVGQD-TDGTVTPQDLGMNWV--VSKKKRDFIGKRSYARADTAR 981
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDI-------EIGTLGVVVGKKALA 240
RK + + D P G+ ++ + +G + AL
Sbjct: 982 PDRKHLVGLLPEDPGTFLPEGTHLVAGGVLPEPPVPMLGHVTSSYRSAALG 1032
>gi|319427660|gb|ADV55734.1| glycine cleavage system T protein [Shewanella putrefaciens 200]
Length = 364
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A S +L I+ + + + +
Sbjct: 50 SHMTVVDVTGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + R+ + + ++ + +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDITVTERPELAMIAVQGPNAKAKAAAV 159
>gi|126435080|ref|YP_001070771.1| FAD dependent oxidoreductase [Mycobacterium sp. JLS]
gi|126234880|gb|ABN98280.1| FAD dependent oxidoreductase [Mycobacterium sp. JLS]
Length = 830
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 56/266 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A FLQ + T ++ + +L G I ++++ TF + +
Sbjct: 523 EVAGPGAAAFLQRMTTNNIDK-SVGSVTYTLMLDEAGGIRSDLTVARLGPTTFQV---GA 578
Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSFID---- 117
D L ++ +V++ +I + W + S+++F
Sbjct: 579 NSPRDFDWLDRHR-PDDVVLRDITGGTCCIGVWGPLARDMVQPLCKDDLSHNAFRYFRAL 637
Query: 118 -----------ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHELRI 149
R S L + + IA+ ++ LRI
Sbjct: 638 RTYLGALPVTMMRVSYVGELGWEIYTSADYGGALWDLLFEAGRDHGVIAAGRVAFNSLRI 697
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G TD P +A +D + + KG ++G+ + ++ +K I
Sbjct: 698 EKGYRSWGTDMTTEH-RPAEAGLDF--AVRMDKGDFVGR---AALEQAPPPQKTLRSIVF 751
Query: 210 TDDLPP--SGSPILTDDIEIGTLGVV 233
D P+ +G +
Sbjct: 752 DDPAAVVLGKEPVYAAGDCVGYVTSA 777
>gi|108799426|ref|YP_639623.1| FAD dependent oxidoreductase [Mycobacterium sp. MCS]
gi|119868539|ref|YP_938491.1| FAD dependent oxidoreductase [Mycobacterium sp. KMS]
gi|108769845|gb|ABG08567.1| FAD dependent oxidoreductase [Mycobacterium sp. MCS]
gi|119694628|gb|ABL91701.1| FAD dependent oxidoreductase [Mycobacterium sp. KMS]
Length = 830
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 84/266 (31%), Gaps = 56/266 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A FLQ + T +V + +L G I ++++ TF + +
Sbjct: 523 EVAGPGAAAFLQRMTTNNVDK-SVGSVTYTLMLDEAGGIRSDLTVARLGPTTFQV---GA 578
Query: 73 KRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ----------EHTFSNSSFID---- 117
D L ++ +V++ +I + W + S+++F
Sbjct: 579 NSPRDFDWLDRHR-PDDVVLRDITGGTCCIGVWGPLARDMVQLLCKDDLSHNAFRYFRAM 637
Query: 118 -----------ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHELRI 149
R S L + + IA+ ++ LRI
Sbjct: 638 RTYLGALPVTMMRVSYVGELGWEIYASADYGGALWDLLFEAGRDHGVIAAGRVAFNSLRI 697
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G TD P +A +D + +G ++G+ + ++ R+ I
Sbjct: 698 EKGYRSWGTDMTTEH-RPAEAGVDF--AVRTDRGDFVGR---AALEQAPPPRRTLRSIVF 751
Query: 210 TDDLPP--SGSPILTDDIEIGTLGVV 233
D P+L D +G +
Sbjct: 752 DDPAAVVLGKEPVLLDGTCVGYVTSA 777
>gi|255324157|ref|ZP_05365280.1| glycine cleavage system T protein [Corynebacterium
tuberculostearicum SK141]
gi|255298783|gb|EET78077.1| glycine cleavage system T protein [Corynebacterium
tuberculostearicum SK141]
Length = 370
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 60/312 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A FL ++ L A+ S I G I+ + + EED F
Sbjct: 51 LSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDKF 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF------------ 110
++ + D++ D+L R+ +V ++ + + +++
Sbjct: 111 LVVPNAGNADTVWDELNN---RAEGFDVTLKNESRDVAMIAVQGPKAAEILVPLVEDNKQ 167
Query: 111 ----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD---- 140
+ + I R + W K ++
Sbjct: 168 DEVYNLGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWEELLKAGAEYDLK 227
Query: 141 ---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ LR+ G+ + I P +A M + + ++G EV+ R +
Sbjct: 228 PCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMAR--AFAKKEADFVGAEVI-RQRAA 283
Query: 198 NIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+ +T T +G+ + D ++GT+ L V A+ + A
Sbjct: 284 EGPQVAITGLTSTQRRAARAGAEVFVGDKKVGTVTSGQPSPTLGH----PVAIALLETSA 339
Query: 257 LTVHGVRVKASF 268
G V+
Sbjct: 340 GLEPGAEVEVEI 351
>gi|13471519|ref|NP_103085.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022261|dbj|BAB48871.1| probable dimethylglycine dehydrogenase [Mesorhizobium loti
MAFF303099]
Length = 803
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 60/303 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G SA +L ++ AR + +L P G++ + + + L
Sbjct: 491 SVSGPSARAWLDRLLAC--RLPKAGQARLAPMLGPDGRLKGDLTVINWGDGDYWLMGSYY 548
Query: 73 KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSW-----NQEHTFSNSSFID---------- 117
R+ + +++ R+ + + I+ + N ++ D
Sbjct: 549 LREF---HMRWFETRAGEGVTVTDISDATGGFLLTGPNARKILERTTHQDVSSAALPFMA 605
Query: 118 -------------ERFSIADVLLHR--------------TWGHNEKIASDIKTYHEL--- 147
R SIA L E + Y+ L
Sbjct: 606 CGAFDIGMVQARLARLSIAGELGFEINCPVTMHAALRETLLAAGEDLGLAEIGYYALNSL 665
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ + +F +D I+ KG ++G+E + + ++ +
Sbjct: 666 RLEKSFGIWSREFTQG-YTSRQTGLDRF--IAFDKGDFVGREAALKERDTGTAQRIVTLE 722
Query: 208 TGTDDLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGV 262
D SG P+ D +G + +++A+A +D ++G AL+VH V
Sbjct: 723 INALDADASGFEPVWRDGRRVGFVTSGGFGYTIGRSVALALVD--GDFAEEGTALSVHIV 780
Query: 263 RVK 265
V+
Sbjct: 781 GVE 783
>gi|327265707|ref|XP_003217649.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Anolis
carolinensis]
Length = 407
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 90/301 (29%), Gaps = 62/301 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK + FL++++ D+ L S G I+ +++ ED + +
Sbjct: 92 KVFGKDRVKFLESLVVGDIAELKPNQGTLSLFTNENGGIIDDLIVTSTSEDHLYVVSNAG 151
Query: 73 KRDS----LIDKLLFYKLR-SNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117
+ + +K K S+V +E+ + L S D
Sbjct: 152 CMEKDFALMQNKAKEMKASGSDVHLEVSENALLALQGPAMSQVLQSGVNDSLAKMPFMSS 211
Query: 118 ---ERFSIADVLLH-----------------RTWGHNEKIASDIKTYHE-------LRIN 150
F + + R E + + + LR+
Sbjct: 212 AAMAVFGVQGCRVTRCGYTGEDGVEISVPASRVVELAELLLKNPTVWLAGLAARDSLRLE 271
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRIQHRNIIRKRP 204
G+ D + P +A + G + G ++ Q + +++
Sbjct: 272 AGLCLYGNDI-DESTTPVEASLVWTLGKRRRVAMDF-----PGASIIL-AQIKEKPKRKR 324
Query: 205 MIITGTDDLPPSGSPILTD-DIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTV 259
+ +T PIL D IG + L A+ ++ K G +LTV
Sbjct: 325 VGLTSIGPPIRQHVPILGPKDKAIGEITSGCPSPCLQKNVAMGYVE--SEYSKVGTSLTV 382
Query: 260 H 260
Sbjct: 383 E 383
>gi|306836535|ref|ZP_07469505.1| glycine cleavage system T protein [Corynebacterium accolens ATCC
49726]
gi|304567559|gb|EFM43154.1| glycine cleavage system T protein [Corynebacterium accolens ATCC
49726]
Length = 370
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 54/317 (17%), Positives = 107/317 (33%), Gaps = 79/317 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL + I+ + +L A+ S I G I+ + + EE+
Sbjct: 51 LSHMGEIWVNGPDAGKFLSYSFISN-LDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTF----------- 110
F++ + D++ D+L R+ +V ++ + + +++
Sbjct: 110 FLVVPNAGNADTVWDELNK---RAEGFDVELKNESRDVAMIAVQGPKAAEILVPLVEDNK 166
Query: 111 -----------------SNSSFIDERFSIADVLL----------HRTWGHNEKIASD--- 140
+ + I R + W K ++
Sbjct: 167 QEAVYELGYYAATMGKVARTFAIIARTGYTGEDGFELIVYNSDAPQLWDELLKAGAEYDI 226
Query: 141 ----IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LR+ G+ + I P +A M + + ++G EV
Sbjct: 227 KPCGLAARDSLRLEAGMPLYGNELSRD-ITPVEAGMSR--AFAKKEADFVGAEV------ 277
Query: 197 RNIIRKRP-----MIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIAR 243
IRKR ++I+G + + + +D ++GT+ L AIA
Sbjct: 278 ---IRKRAEEGPQVVISGLTSDQRRAARADAEVFLNDTKVGTVTSGQPSPTLGHPVAIAL 334
Query: 244 IDKVDHAIKKGMALTVH 260
+D ++ G A+ V
Sbjct: 335 LD-TSAELEPGTAVEVE 350
>gi|224026155|ref|ZP_03644521.1| hypothetical protein BACCOPRO_02911 [Bacteroides coprophilus DSM
18228]
gi|224019391|gb|EEF77389.1| hypothetical protein BACCOPRO_02911 [Bacteroides coprophilus DSM
18228]
Length = 361
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 52/306 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ F+Q + + + L + + G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPHALEFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYAYEPEKYMLVVNAAN 115
Query: 74 RD----------------------------------SLIDKLLFYKLRSN-----VIIEI 94
+ + + KL L + E+
Sbjct: 116 IEKDWNWCVSHNQVGAELENSSDHIGQLAVQGPKALATLQKLTSVDLSAIPYYTFCTGEL 175
Query: 95 QPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
+ V++S + F + + +I D + R + LR+
Sbjct: 176 AGVKNVIISNTGYTGAGGFELYFYPQDAMTIWDA-VFRAGEEFGIKPIGLGARDTLRLEM 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D T P +A + + K + + + R + + RK
Sbjct: 235 GFCLYGNDI-DDTTSPLEAGLGWITKFVDGKN-FTNRAALERQKAEGVTRKLVGFEMIDR 292
Query: 212 DLPPSGSPIL-TDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRV 264
+P G + + EIG + + + + + + ++
Sbjct: 293 GIPRHGYTLTDAEGNEIGHVTSGTMSPIRKIGIGMGYVKAEYAKPGTEIWLDNRGRKLKA 352
Query: 265 KASFPH 270
+ P
Sbjct: 353 QVVKPP 358
>gi|126697216|ref|YP_001092102.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9301]
gi|166221560|sp|A3PFH6|GCST_PROM0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|126544259|gb|ABO18501.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9301]
Length = 370
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 95/306 (31%), Gaps = 54/306 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63
S+ I V G + ++Q ++ + + +L +G I+ +I + E D
Sbjct: 51 SHMGVISVKGINPKDYIQKFFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110
Query: 64 --TFILEIDRSKRDSLIDKLL-----------FYKLRSNVIIEIQP--INGVVLSWNQEH 108
+L ++ S+ + + +K ++ V++ +Q + W
Sbjct: 111 ITELLLIVNASRYEEDFQWIKNNLNKDEISITNFK-KAKVLLALQGKKSFDLFEEWIDSS 169
Query: 109 TFSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY----------- 144
+F I + FS + I +
Sbjct: 170 ISHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVAPC 229
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
LR+ G+ D T P++A + L + + G+ + I
Sbjct: 230 GLGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGI 287
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGM 255
+K + + G +L + IGT+ +A+A A I+ I +
Sbjct: 288 QKKLVGLFIEGKAIGRKGCTVLKGEENIGTITSGSWSPTKQQAIAFAYINTSHALINNEV 347
Query: 256 ALTVHG 261
+ + G
Sbjct: 348 QVLIRG 353
>gi|20804063|emb|CAD31640.1| PROBABLE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN
[Mesorhizobium loti R7A]
Length = 988
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+VCGK A FL + + L LP AR +L G I S++ +D F +
Sbjct: 658 IEVCGKDAAEFLNRVYSNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLADDRFFMTTTT 717
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 718 AYAAGVMTHLEF 729
>gi|331696369|ref|YP_004332608.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190]
gi|326951058|gb|AEA24755.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190]
Length = 370
Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 55/306 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++ G A L + + + A+ S + P G +L ++ ++ +D F
Sbjct: 54 LSHMGEVEFVGPQAAEALDHALAGKLSAVQVGRAKYSLLCAPDGGVLDDLVVYRLADDRF 113
Query: 66 ILEIDRSK----RDSLIDKLLFY-----------------------KLRSNVIIEIQPIN 98
++ ++ S LI + + LRS +
Sbjct: 114 LVVVNASNAAQDAAELISRAKGFDVDVTDRAAETALIAVQGPRSPDVLRSAEPGVASILE 173
Query: 99 GVVLSWNQEHTFSNSS-----------------FIDERFSIADVLLHRTWGHNEKIASDI 141
G+ ++ T DE L G + + +
Sbjct: 174 GLRYYASEPATIGGIDVLLARTGYTGEDGFELYVPDEHAPALWNTLLAAGGQHALHPAGL 233
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ + + P A + + + ++G++ ++ +
Sbjct: 234 ACRDTLRLEAGMALYGHELT-AETNPFAAGLRRVVALDKE---FVGRDTLA-ALAEDEPA 288
Query: 202 KRPMIITGTDDLP--PSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
+ +TGT + + DD +G + V L A+A ID+ + +
Sbjct: 289 RVLAGLTGTGRRAGRAGATVLGADDAPVGVVTSGVLSPTLGVPIALAYIDRGLSEVGTEL 348
Query: 256 ALTVHG 261
+ V G
Sbjct: 349 RVDVRG 354
>gi|260220917|emb|CBA28964.1| Aminomethyltransferase, mitochondrial [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 386
Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 7 SNQSFIKVCGKSA-IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ +++ G A F ++++ DV+ LP R +LT +G I+ + K +D
Sbjct: 57 SHMGQLRLSGPDACAAF-ESLMPVDVIDLPLGKQRYGLLLTIEGTIIDDLMFFKKAQDEL 115
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
+ ++ + + I + K+ S + P ++ + +
Sbjct: 116 FVIVNGACKVGDIAHIQA-KIGSRCQVTPLPDYALLALQGPQAVTA 160
>gi|255530320|ref|YP_003090692.1| glycine cleavage system aminomethyltransferase T [Pedobacter
heparinus DSM 2366]
gi|255343304|gb|ACU02630.1| glycine cleavage system T protein [Pedobacter heparinus DSM 2366]
Length = 359
Score = 45.6 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 52/281 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G++A+ +Q + + D L + S + G I+ L+ +I+E T++L ++ S
Sbjct: 56 LKGENALDLIQRVTSNDASKLYDGKVQYSCLPNENGGIVDDLLVYRIDELTYMLVVNASN 115
Query: 74 RDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFIDERFSIAD-------- 124
+ + + + R V + I ++ + + S D + D
Sbjct: 116 IEKDWNWIQKFNTR-GVEMHNISDKTSLLAIQGPKAAEALQSLTDVDLASMDYYNFVKGK 174
Query: 125 ----------VLLHRTWGHNEKIASDIKT---YHE--------------------LRINH 151
+ G E + ++ LR+
Sbjct: 175 FAGVDNVLISATGYTGAGGFEIYFDNEHADAIWNAIFEAGKPFNIKPIGLGARDTLRLEM 234
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G D T P +A + + +K + E + + + RK
Sbjct: 235 GFCLYGNDIDDHTS-PIEAGLGWI--TKFSK-IFTNSEALLAQKEAGVARKLVGFEMIDR 290
Query: 212 DLPPSGSPILTDDIEI-GTLGVVVGK----KALAIARIDKV 247
+P I+ + + G + KA+ + IDK
Sbjct: 291 GIPRHDYEIVDGEGNVIGKVTSGTQSPSLQKAIGMGYIDKA 331
>gi|254525819|ref|ZP_05137871.1| glycine cleavage system T protein [Prochlorococcus marinus str. MIT
9202]
gi|221537243|gb|EEE39696.1| glycine cleavage system T protein [Prochlorococcus marinus str. MIT
9202]
Length = 370
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 52/305 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI---EED 63
S+ I + G + ++Q + ++ + + +L +G I+ +I + E D
Sbjct: 51 SHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQEND 110
Query: 64 --TFILEIDRSK-RDSLI---DKLLFYKL------RSNVIIEIQPIN--GVVLSWNQEHT 109
+L ++ S+ ++ + L ++ + V++ +Q N + W +
Sbjct: 111 LSELLLIVNASRYKEDFQWIKNHLNISEISITNFKKDKVLLALQGKNSFDLFEEWIESSI 170
Query: 110 FSNSSF---------IDER----FSIADVLLHRTWGHNEKIASDIKTY------------ 144
+F I + FS + I +
Sbjct: 171 SHIPNFGCEYKIFEHISPKEKIFFSKTGYTGENGLEILLSKKAAINLWDFSISKNVTPCG 230
Query: 145 ----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D T P++A + L + + G+ + I
Sbjct: 231 LGARDTLRLEAGMHLYGQDINEETS-PYEAGLGWLVHLENNHE-FFGRRFLEEQSRLGIQ 288
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKKGMA 256
+K + + G +L + IGT+ +A+A A I+ I +
Sbjct: 289 KKLVGLSIEGKAIGRKGCAVLKGEENIGTITSGSWSPTKQQAIAFAYINTSHALINNEVQ 348
Query: 257 LTVHG 261
+++ G
Sbjct: 349 ISIRG 353
>gi|190889725|ref|YP_001976267.1| sarcosine dehydrogenase [Rhizobium etli CIAT 652]
gi|190695004|gb|ACE89089.1| probable sarcosine dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 816
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 76/277 (27%), Gaps = 54/277 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
+ G A L I DV P + +L +G I +++I E+ + +
Sbjct: 496 LKGSDAEAALSWIAANDVAR-PVGSLIYTQMLNDKGGIECDLTVARIAENEYYIVTGTGF 554
Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106
I LID Y + R+ V + +
Sbjct: 555 ATHDFDWIARNIPAEMHAELIDVTSAYSVLSLMGPNARAVLEKVTGSDVSNTAIPFGQVK 614
Query: 107 EHTFSNSSFIDERFSIADVLLHRT-----------------WGHNEKIASDIKTYHELRI 149
S R + L + G + + + R+
Sbjct: 615 TIGISGCPVRALRITYVGELGYELHVPIEYATAVYDALMASGGELGLVNAGYRAIESCRL 674
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
G +D P P +A + + + K + G+E + R Q ++KR
Sbjct: 675 EKGYRAWGSDIGPDHT-PVEAGLGW--AVKIRKNIPFRGREAIER-QLAGGVKKRLACFV 730
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
D + I + +G L G + +
Sbjct: 731 PDDPDIVLLGRETIYRNGKRVGWLSS--GGFGYTLGK 765
>gi|15963836|ref|NP_384189.1| putative sarcosine oxidase alpha subunit transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307309537|ref|ZP_07589192.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
BL225C]
gi|307320369|ref|ZP_07599786.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
AK83]
gi|7388257|sp|O87386|SOXA_RHIME RecName: Full=Sarcosine oxidase subunit alpha; Short=Sarcosine
oxidase subunit
gi|15073011|emb|CAC41470.1| Putative sarcosine oxidase alpha subunit transmembrane protein
[Sinorhizobium meliloti 1021]
gi|306893935|gb|EFN24704.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
AK83]
gi|306899997|gb|EFN30618.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
BL225C]
Length = 987
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A FL + L LP AR +L G I S++EE+ F +
Sbjct: 657 IEITGSDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLEENRFFMTTTT 716
Query: 72 SKRDSLIDKLLF 83
+ +++ L F
Sbjct: 717 AYAAGVMNHLEF 728
>gi|23009095|ref|ZP_00050272.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase)
[Magnetospirillum magnetotacticum MS-1]
Length = 566
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 24/64 (37%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A +Q +T DV L +A+ G ++ + ++ + F
Sbjct: 304 LSALRKFEVIGPDAEALMQRALTRDVRKLAVGQIVYAAMCYEHGGMIDDGTLFRLGPNNF 363
Query: 66 ILEI 69
Sbjct: 364 RWIC 367
>gi|317486597|ref|ZP_07945417.1| aminomethyltransferase folate-binding domain-containing protein
[Bilophila wadsworthia 3_1_6]
gi|316922149|gb|EFV43415.1| aminomethyltransferase folate-binding domain-containing protein
[Bilophila wadsworthia 3_1_6]
Length = 414
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + + V G A+ LQ T D+ +L A A L G ++ ++ + E + +
Sbjct: 52 HMAGLMVSGPDALEALQWAFTKDL-SLSGPRAAYGAFLDASGGVVDDAIVYPLSEGRYFV 110
Query: 68 EIDRSKRDSLIDKLL 82
++ K + + + L
Sbjct: 111 VLNVGKGERIAESLS 125
>gi|308500235|ref|XP_003112303.1| hypothetical protein CRE_29621 [Caenorhabditis remanei]
gi|308268784|gb|EFP12737.1| hypothetical protein CRE_29621 [Caenorhabditis remanei]
Length = 871
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A+ +LQ + +A+V P + + +G + +S++ + F + +
Sbjct: 523 ITGEDAVEYLQFLCSANVDE-PIGTTVYTGMQHQKGGYVTDCTLSRLGDKKFFMVAPTIQ 581
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105
++ ++ + ++ + +Q + G + +
Sbjct: 582 QERVLVWMKKWQAILKARVHVQDVTGAYTALD 613
>gi|269219427|ref|ZP_06163281.1| glycine cleavage system T protein [Actinomyces sp. oral taxon 848
str. F0332]
gi|269211123|gb|EEZ77463.1| glycine cleavage system T protein [Actinomyces sp. oral taxon 848
str. F0332]
Length = 364
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 57/303 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V G A L + T+P AR S +L P G I+ ++ ++EE +
Sbjct: 51 LSHMGQVEVEGPQAAAVLDYSLCTKPSTMPAGRARYSMMLAPDGGIIDDLIVYRLEEARY 110
Query: 66 ILEIDRSKRDSLIDKLLF------------------YKLRSNVIIEIQP---INGVVLSW 104
++ + + R +++++L + +I +Q + VV
Sbjct: 111 LVVPNGANRITVVEELTRRGREWCAKNEASESHSIVDRTLERALIAVQGPESLEAVVALL 170
Query: 105 NQEHTFSNSSF-----IDERFSIADVLLHRT--------------------WGHNEKIAS 139
E ++ ++ + ++ RT W E A
Sbjct: 171 GPEDAERVAALGYYRALEAKVDGVPAMIARTGYTGETGYEIMLPASAAPDVWRKIEAKAC 230
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ + LR+ G+ + + P DA L ++G ++ +
Sbjct: 231 GLASRDTLRLEAGMPLYGNELGRD-VTPADAGAARLPADHE----FVGGAALAERKPTWD 285
Query: 200 IRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMAL 257
+ G +G+ +++ E+G + L + +++ I +G L
Sbjct: 286 ----LYALVGEGRRAARAGNTAMSEGREVGKVTSGALSPTLGYPIALARLEPGIVEGAVL 341
Query: 258 TVH 260
V
Sbjct: 342 DVD 344
>gi|227821989|ref|YP_002825960.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234]
gi|227340989|gb|ACP25207.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234]
Length = 987
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G+ A FL + L LP AR +L G I S++EE+ F +
Sbjct: 657 IEISGRDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGMIYDDGTTSRLEENRFFMTTTT 716
Query: 72 SKRDSLIDKLLF 83
+ +++ L F
Sbjct: 717 AYAAGVMNHLEF 728
>gi|89095375|ref|ZP_01168291.1| glycine cleavage system T protein [Oceanospirillum sp. MED92]
gi|89080380|gb|EAR59636.1| glycine cleavage system T protein [Oceanospirillum sp. MED92]
Length = 371
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 46/271 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G++A L+ ++ D++ LP R + +G I+ +++ D
Sbjct: 53 SHMGQVILKGENAAAELEKLVPVDIIDLPAGKQRYALFTNDEGGIMDDLMVTNYG-DHLY 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------SFID 117
+ ++ + ++ I + L V +E+ +V E + S F+D
Sbjct: 112 VVVNAACKEQDIAHMQA-NLGEGVELEVLDDRALVALQGPEAAQALSRICPEVNELVFMD 170
Query: 118 ERF---------------------------SIADVLLHRTWGHNEKIASDIKTYHELRIN 150
R + A+ L E + LR+
Sbjct: 171 SRHIAIDGVDCFVSRSGYTGEDGYEISIPSAEAERLCRLFLEQPEVEFIGLGARDSLRLE 230
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQE-VVSRIQHRNIIRKRP 204
G+ D P T P + + G + G E ++ +I ++N RKR
Sbjct: 231 SGLCLYGHDLDP-TTTPIEGSLIWAISKCRRADGERAGGFPGAEKILDQIANKNYTRKRV 289
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+I +G + + + +IG +
Sbjct: 290 GLIASGKAPIREGADLVNAEGEKIGVVTSGS 320
>gi|255021021|ref|ZP_05293074.1| Aminomethyltransferase (glycine cleavage system T protein)
[Acidithiobacillus caldus ATCC 51756]
gi|254969435|gb|EET26944.1| Aminomethyltransferase (glycine cleavage system T protein)
[Acidithiobacillus caldus ATCC 51756]
Length = 381
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 109/314 (34%), Gaps = 52/314 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP--YKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + V G A FL+ + DV L A + ++ G IL ++++
Sbjct: 53 SHMRPLDVSGPQARDFLRYALANDVARLDGQDGKALYTVMVQEDGGILDDLIVTRRTARE 112
Query: 65 FILEIDRSKRDSLIDKLLFYK------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID- 117
+ L ++ ++ +S L R+ I+ +P G++ ++ +D
Sbjct: 113 YRLVLNAARAESDTVHLRCLARRWAGSQRAAPEIQERPDLGILACQGPVAARQLAAVLDF 172
Query: 118 ----ERFSIAD----------------------VLLHRTWGHNEKIASD------IKTYH 145
+R + R G + + + +
Sbjct: 173 PELLQRKPFSTLERDQLFLSRTGYTGEDGFEIIAPGDRLLGLADALVAAGVKPAGLAARD 232
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D + P + +D + + ++G+ ++ + + R+
Sbjct: 233 SLRLEAGLNLYGQDMTVADS-PARSNLDWTVDLRDPEREFLGRSALAAERAQG-ARQALR 290
Query: 206 IITGTDDLPPSGSPILT-DDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+ D + +G + + + + +G + ++ +A+AR+ D + + +++
Sbjct: 291 GLILKDGIARAGCAVSSREGLPLGQVTSGLFAPSLRRGIALARL-TSDTPLGATVFVSLR 349
Query: 261 G---VRVKASFPHW 271
G V + P W
Sbjct: 350 GREHVALVVQPPFW 363
>gi|15221119|ref|NP_172650.1| aminomethyltransferase, putative [Arabidopsis thaliana]
gi|30682471|ref|NP_849646.1| aminomethyltransferase, putative [Arabidopsis thaliana]
gi|18206365|sp|O65396|GCST_ARATH RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|3157944|gb|AAC17627.1| Very strong similarity to aminomethyltransferase precursor
gb|U79769 from Mesembryanthemum crystallinum. ESTs
gb|T43167, gb|T21076, gb|H36999, gb|T22773, gb|N38038,
gb|T13742, gb|Z26545, gb|T20753 and gb|W43123 come from
this gene [Arabidopsis thaliana]
gi|21928147|gb|AAM78101.1| At1g11860/F12F1_30 [Arabidopsis thaliana]
gi|30102502|gb|AAP21169.1| At1g11860/F12F1_30 [Arabidopsis thaliana]
gi|332190681|gb|AEE28802.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332190682|gb|AEE28803.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332190683|gb|AEE28804.1| aminomethyltransferase [Arabidopsis thaliana]
Length = 408
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK +PFL+ ++ ADV L + +G + +I+K+ ++ L ++
Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 150 GCRDKDLAHI 159
>gi|222106743|ref|YP_002547534.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4]
gi|221737922|gb|ACM38818.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4]
Length = 987
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++CG A FL + L LP AR +L G I S+++E+ + +
Sbjct: 657 IEICGPDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRMDENRYFMTTTT 716
Query: 72 SKRDSLIDKLLF 83
+ +++ L F
Sbjct: 717 AYAAGVMNHLEF 728
>gi|55742723|ref|NP_620802.2| dimethylglycine dehydrogenase, mitochondrial precursor [Rattus
norvegicus]
gi|55715821|gb|AAH85697.1| Dimethylglycine dehydrogenase [Rattus norvegicus]
Length = 857
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 47/317 (14%), Positives = 97/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S
Sbjct: 525 IDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRGRVYAELTVSHQSPG 582
Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEHT-----FSNSSF 115
F+L + + +R +V I I GV+ ++
Sbjct: 583 EFLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDL 642
Query: 116 IDE--------------------RFSIADVLLHRTWGHNEKIAS---------------D 140
D+ R S L + E A+ +
Sbjct: 643 SDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDN 702
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHR 197
TY + LR+ ++ T P +A +D I L K + G++ + +I+ +
Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLDYF--IKLNKPANFTGKQALKQIKAK 759
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TD++ P G+ + IG + A A ++ +
Sbjct: 760 GLKRRLVCLTLATDNVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEVG 819
Query: 251 IKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 820 QQVEVELLGKNYPATII 836
>gi|254479868|ref|ZP_05093116.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214039430|gb|EEB80089.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 383
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 90/298 (30%), Gaps = 54/298 (18%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE--- 68
I+V G AI F Q + DV + P R G ++ ++ ++EE F L
Sbjct: 70 IEVSGSDAIEFTQLLTPRDVASCPVGRCRYVVFTDHDGGVINDAIMLRLEESRFWLSPGD 129
Query: 69 ---------------IDRSKRDSLIDKLLFY-----KLRSNVIIEIQPINGVVLSWNQEH 108
+D + + L K+ + ++ G E
Sbjct: 130 GDVLLWAQGVAARSGMDVKLTEPDVSPLQLQGPLAPKVARKLFGDVAVEMGYYHLHELE- 188
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY---------------HELR-INHG 152
+ + R + L + + + +++ +R I G
Sbjct: 189 -LNGIPLVLSRTGWSGELGYEIYLRDGSRGTELWDLVMAAGEEFGIKPACPSAMRTIEGG 247
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIITGTD 211
I+ +D P M+ L + L K YIG+ + +I R R + I
Sbjct: 248 ILSYASDITREDT-PFTIGMERL--LDLDKSQDYIGKAALQQIAKEGTPR-RLVGIEIDG 303
Query: 212 DLPPSGS---PILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
D + + ++G L R+++ + L G +K
Sbjct: 304 DPIGGNDRFWDVFENQDKVGHLTRCAWSP-----RLERNIGLVNLPTELAEPGTALKV 356
>gi|217979705|ref|YP_002363852.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella
silvestris BL2]
gi|217505081|gb|ACK52490.1| glycine cleavage T protein (aminomethyl transferase) [Methylocella
silvestris BL2]
Length = 378
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 89/262 (33%), Gaps = 42/262 (16%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
I V G ++ L A++T+D+ + + S I+ +G ++ L+ + + +
Sbjct: 59 LRLIDVSGPDSLAALNAMLTSDIARIKPGQSSISNIVDDEGSLIDDVLVYCDGPNAYRIS 118
Query: 69 IDRSKRDSLIDKLLFYK---LRSNVIIEIQPING----VVLS------------------ 103
+ ++ + R + I + G +L+
Sbjct: 119 HGGGALEDVLPAFAEGRNVQFRKDNDTHILSLQGPKALEILAPHTPMNLADLRYFEHQRT 178
Query: 104 --WNQEHTFSNSSFIDER-------FSIADVLLHRTWGHNEKIASDIKTY---HELRINH 151
+ ++ + + + ER + A L + + + ++ +R+
Sbjct: 179 TLFGRDVSIARGGYSAERGYEVFCKAADAVFLWDQILEAGKPFGATAVSWSCLDIVRVEG 238
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGT- 210
++ D P +A +D + L+K + G++ + R R +R I
Sbjct: 239 ALLFFPFDMPEGDTTPWEAGVDWS--VDLSKPAFRGKQALER--RRAEVRTAQAGIEIDH 294
Query: 211 DDLPPSGSPILTDDIEIGTLGV 232
+ G+ I D EIG +
Sbjct: 295 HEAVEPGAKIFKDGREIGVVNS 316
>gi|254459509|ref|ZP_05072925.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2083]
gi|206676098|gb|EDZ40585.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium HTCC2083]
Length = 1005
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 80/262 (30%), Gaps = 51/262 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G ++ ++++I++ TF+
Sbjct: 679 VKGPDAGKFLDMLYTNMMSTLKVGKCRYGLMCSENGFLIDDGVVARIDDVTFLCHTTTGG 738
Query: 74 RDSLIDKL-----------LFY-------------------KLRSNVIIEIQPINGVVLS 103
+++ + Y K+ + + +
Sbjct: 739 AETIHGHMEEWLQTEWWDWNVYVANVTEQYAQIAVVGPNARKVLEKLGGMDVSKDALGFM 798
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------- 146
+ T R S + L + + + + + H
Sbjct: 799 EWADGTIGGFDARVYRISFSGELSYEIAVPSSQGLAFWEALHAAGEEFGVMPYGTETLHI 858
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR G + + T+ P D + +S K Y+G+ R + R + +
Sbjct: 859 LRAEKGFIMIGDE-TDGTVIPQDLNLQW--ALSKKKEDYLGKRAHQRSHMADPERWKLVG 915
Query: 207 I-TGTDDLPPSGSPILTDDIEI 227
+ T + P G+ + + ++
Sbjct: 916 LETVDKSVLPDGAYAVEEGVKA 937
>gi|260834879|ref|XP_002612437.1| hypothetical protein BRAFLDRAFT_214256 [Branchiostoma floridae]
gi|229297814|gb|EEN68446.1| hypothetical protein BRAFLDRAFT_214256 [Branchiostoma floridae]
Length = 822
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 80/277 (28%), Gaps = 62/277 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++ G + +LQ + +V +P + +L G ++++ E+ +++
Sbjct: 495 VRSSGDEVVTYLQRLCCNEVD-VPVGTVLHTGMLNHYGGYENDCSLARLAENLYLIISPS 553
Query: 72 SKR----DSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEHTFSNSSFID--------- 117
++ + L L V I +I P + + D
Sbjct: 554 NQMVRSWEWLHRHLPKEGT---VQIRDITPYYAAINVLGPRSRELMAELTDAVTMSSQYF 610
Query: 118 -------------ER-----FSIADVLLHRTWGHNEKIAS---------------DIKTY 144
R S + L + E ++ Y
Sbjct: 611 PSFTCRELSIGFAPRIRAMSLSHSGELGWMLYVPQEYALHVYDHIMHKGRDFGIRNVGYY 670
Query: 145 HE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIR 201
LR+ D +++ P + + + KG +IG+ + + + + +
Sbjct: 671 TIAHLRMERAFAFWGIDL-DASVTPFEC--QREHRVKFGKGVDFIGRSALLKQKQEGVRQ 727
Query: 202 KRPMIITGTDDL-----PPSGSPILTDDIEIGTLGVV 233
K M + DL P G PI +G
Sbjct: 728 KFVMFLLDNHDLDNDLWPWGGEPIWEGGRVVGRTTSA 764
>gi|260462119|ref|ZP_05810363.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259031979|gb|EEW33246.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 803
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 100/299 (33%), Gaps = 54/299 (18%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED------TFIL 67
V G A +L ++ + AR + +L P G++ + + ++ L
Sbjct: 492 VSGPGAQAWLDRLLACKLPK--PGQARLAPMLGPDGRLKGDLTVINWDGGDYWLMGSYYL 549
Query: 68 E-----------IDRSKRDSLIDKLLFYKLR---SNVIIEI---QPINGVVLSWNQEHTF 110
D L D + + L + I+E Q ++ L + F
Sbjct: 550 REFHMRWFESHAADGVTVTDLSDAMSGFLLTGPNARKILERTTHQDVSAAALPFMACGAF 609
Query: 111 SNS--SFIDERFSIADVLLHR--------------TWGHNEKIASDIKTY---HELRINH 151
R SIA L E + Y + LR+
Sbjct: 610 DIGMVRARVARLSIAGELGFEISCPVAMHATLRETLLAAGEGLGLAEIGYYALNALRLEK 669
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ +F P +D I+ KG +IG+E R + ++ +
Sbjct: 670 SFGIWSREFTQGYA-PRQTGLDRF--IAFDKGDFIGREAALRERQTGTSQRIVTLEIDAL 726
Query: 212 DLPPSG-SPILTDDIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVK 265
D SG P+ D +G + K++A+A +D D + ++G AL+VH V V+
Sbjct: 727 DADASGFEPVWRDGRRVGFVTSGGFGYTIGKSVALALVD--DDSAEEGTALSVHIVGVE 783
>gi|55376909|ref|YP_134760.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
gi|55229634|gb|AAV45054.1| probable aminomethyltransferase [Haloarcula marismortui ATCC 43049]
Length = 458
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 46/220 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A ++T DV + + + G +L ++ + +ED F I
Sbjct: 100 IRVKGPDAEALTNYVVTRDVTGMDAMDGKYVILCNEDGGVLNDPVLLRPKEDEFWFSISD 159
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING--------------VVLSWNQEHTFSNSSFID 117
S +L+ L + ++ +EI I+ V + ++ ++
Sbjct: 160 S---TLMQWLQGVNVDNDFDVEIDEIDVAPMQIQGPRALDVMVDVVGDKVKDVPYYGLME 216
Query: 118 ERFSIADVLLHRTWGHNEK---------IASDIKTY------------------HELRIN 150
DVL+ +T EK + + + + H RI
Sbjct: 217 AEIDGCDVLISQTGFSGEKGFEVYVKDAMENAERVWDPVMESVKDHGGRQIAPGHHRRIA 276
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEV 190
GI+ D T P + + + YIG+EV
Sbjct: 277 AGIMSWGQDLDHETS-PFQVNLGY-HVPDDKEADYIGKEV 314
>gi|38481924|gb|AAR21108.1| mitochondrial glycine decarboxylase T-protein [Thalassiosira
weissflogii]
Length = 414
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ I+ GK F++ ++ D+ +LP S I QG I+ +I+
Sbjct: 81 SLFDVSHMGQIRWHGKDRTAFIEKLVVGDIASLPAGSGCLSLITNAQGGIIDDTVITNAG 140
Query: 62 EDTFILEIDRSKRDSLIDKLL 82
D + ++ + + +
Sbjct: 141 -DYIYMVVNGATKFGDMKHFK 160
>gi|198433859|ref|XP_002125419.1| PREDICTED: similar to aminomethyltransferase [Ciona intestinalis]
Length = 405
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 91/282 (32%), Gaps = 53/282 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK F++++ DV LP + +G I+ +I++ ++D +
Sbjct: 91 KVYGKDKESFIESMTVCDVKGLPENGGSLTVFTNAEGGIMDDAIINQTQQDYLYCVSNAG 150
Query: 73 KRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHTFSNSSF------------ 115
D + L + V++E+ + + + +
Sbjct: 151 CSDKISTCLRENLIDFTAKGGEVVLELLDCGLLAVQGPKMAEVLQTGTDTDLSKLYFMQN 210
Query: 116 -------IDERFSIADVLL----------HRTWGHNEKIA-------SDIKTYHELRINH 151
+D R + +R E I + + LR+
Sbjct: 211 VEANLFGVDCRITRCGYTGEDGVEISVAKNRAVELAENICSHEDVELAGLGARDSLRLEA 270
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQE-VVSRIQHRNIIRKRPMIITG 209
G+ D P +A + G K + G E +V++I+ + R+ +I++
Sbjct: 271 GLCLYGNDI-DEMTTPVEAGLTWCIGKRRRKEKNFPGAEKIVAQIKSKPSKRRSGLIVS- 328
Query: 210 TDDLPPSGSPILTD-DIEIGTLGVVV------GKKALAIARI 244
+ +G+ + EIG++ A+A +
Sbjct: 329 -SAIARNGAIVQDGNGNEIGSVTSGCPSPTLSANIAMAYLPL 369
>gi|330957054|gb|EGH57314.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 1006
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 56/322 (17%), Positives = 97/322 (30%), Gaps = 71/322 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLD 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKPYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKAL----------- 239
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPIDPTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGYSFAMGVVKG 967
Query: 240 AIARI-DKVDHAIKKGMALTVH 260
+ RI ++V + G +
Sbjct: 968 GLKRIGERVFAPLADGSVIEAE 989
>gi|297844036|ref|XP_002889899.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp.
lyrata]
gi|297335741|gb|EFH66158.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK +PFL+ ++ ADV L + +G + +I+K+ ++ L ++
Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 150 GCRDKDLAHI 159
>gi|242074370|ref|XP_002447121.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor]
gi|241938304|gb|EES11449.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor]
Length = 407
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G+ AIPFL++++ ADV L + +G + +++K+ + L ++
Sbjct: 89 LSLRGRDAIPFLESLVIADVAALRDGTGTLTVFTNDKGGAIDDSVVTKVTDHHIYLVVNA 148
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 149 GCRDKDLAHI 158
>gi|39995483|ref|NP_951434.1| glycine cleavage system T protein [Geobacter sulfurreducens PCA]
gi|39982246|gb|AAR33707.1| glycine cleavage system T protein [Geobacter sulfurreducens PCA]
gi|298504483|gb|ADI83206.1| glycine cleavage system T protein [Geobacter sulfurreducens KN400]
Length = 362
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 87/240 (36%), Gaps = 40/240 (16%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR----DSLIDKL----- 81
V ++P +R +L G I+ ++ ++ ++ ++ ++ + ++ +L
Sbjct: 76 VASIPVGRSRYGFLLNGDGGIMDDLIVFRLAQNEAMVVVNAATIGKDFAAISARLGGGGF 135
Query: 82 -LFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-----WGH 133
+ + ++ + V + + FI + AD ++ RT G+
Sbjct: 136 QDISAATAKLDLQGPLSREVLVEVIGPEIAAIPYFKFIRTKVLGADAIVSRTGYTGELGY 195
Query: 134 NEKIASD--IKTYHE-----------------LRINHGIVDPNTDFLPSTIFPHDALMDL 174
+ SD ++ + LR+ G +D + P +A ++
Sbjct: 196 EIFLPSDRVVELWQRLLADPRVRPAGLGARDVLRLEVGYSLYGSDI-DESTTPLEAGLES 254
Query: 175 LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
+S K ++G++ + + ++R+R + P IL ++G + V
Sbjct: 255 F--VSFDKS-FVGKDALLAQRAEGVMRRRVAFQVASRRSPRHDYEILFQGEQVGAVTSGV 311
>gi|28867688|ref|NP_790307.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850923|gb|AAO54002.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331015002|gb|EGH95058.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 1006
Score = 45.2 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 88/291 (30%), Gaps = 59/291 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ ++ L Y KL S V I++
Sbjct: 731 MTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLSEVTDIDLG 790
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY---- 144
++W +E + R S L + G EKIA K Y
Sbjct: 791 REAFPFMTW-KEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAGKQYNLTP 849
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P D M G + +IG ++R
Sbjct: 850 YGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMGWCVGRT-KPFSWIGWRGMNREDCVR 907
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 908 EQRKQLVGLKPIDSTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGY 958
>gi|254452771|ref|ZP_05066208.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Octadecabacter antarcticus 238]
gi|198267177|gb|EDY91447.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Octadecabacter antarcticus 238]
Length = 756
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 98/308 (31%), Gaps = 62/308 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q T ++ TL +A+ G ++ + ++ +D F
Sbjct: 425 LSPLRKFEITGPDAEALCQYAFTRNMKTLAIGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 484
Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL------------SWNQEH- 108
+ + L +KL L V ++ V + W H
Sbjct: 485 RWIGGSDYGGEWLRELAEKLGLKVL---VRASTDQMHNVAVQGPESRDLLRKIVWTAPHN 541
Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS------------ 139
T S ++F+ R L + H + A
Sbjct: 542 PEFDQLGWFRFTPARLNTESGTAFVLSRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQDH 601
Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
++ +RI G++ DF T P +A + + ++G++ + R
Sbjct: 602 GIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKTDDFVGRDALIR- 659
Query: 195 QHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDH 249
+ K+ + + ++ G I +IG + + L A+ARID
Sbjct: 660 -RKEHPMKKLVGLEIDSNVDVGHGDCIHIGRAQIGEVTSAMRSPLLKKHVALARIDVAHS 718
Query: 250 AIKKGMAL 257
A+ + +
Sbjct: 719 AVGTEVEI 726
>gi|328769709|gb|EGF79752.1| hypothetical protein BATDEDRAFT_16867 [Batrachochytrium
dendrobatidis JAM81]
Length = 415
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 53/272 (19%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
GK + F+++++ D+ L + S +G I+ +I++ ++ + +
Sbjct: 94 SGKDHVKFMESLVVGDIAGLQMGSSTLSVFTNEKGGIIDDTVINRQDDKGLYVVSNAGCA 153
Query: 75 DSLIDKLLFY-------------KLRSNV-IIEIQPINGVVLSWNQE-HTFSNSSFIDER 119
D + + K+ NV +I +Q + + + S F+ R
Sbjct: 154 DKDLAHIRKQLADFQNKGGDVDVKVLDNVSLIALQGPDAATVVQSLTKEDLSKFGFMTSR 213
Query: 120 ---------------------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHG 152
A L + H + + LR+ G
Sbjct: 214 HMDIAGVDVYASRCGYTGEDGFEISVAHKDAVALTQKLLDHPHVELAGLGARDSLRLEAG 273
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQE-------VVSRIQHRNIIRKRP 204
+ D I P + + G +G ++G + V ++ + + R
Sbjct: 274 LCLYGHDL-NEDITPAEGGLTWTIGKRRRAEGGFLGADKILSQLKVTAKGNVQLDVANRR 332
Query: 205 MIITGTDDLPPSGSPILT--DDIEIGTLGVVV 234
+ + G+ I + +IGT+
Sbjct: 333 VGFIVSGAPAREGAEIYDKVNGTKIGTITSGC 364
>gi|313837471|gb|EFS75185.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA2]
gi|314929319|gb|EFS93150.1| glycine cleavage system T protein [Propionibacterium acnes
HL044PA1]
gi|314971678|gb|EFT15776.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA3]
gi|328906983|gb|EGG26749.1| aminomethyltransferase [Propionibacterium sp. P08]
Length = 371
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 37/317 (11%), Positives = 102/317 (32%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G A L + + + A+ S +LT G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDAGAALDYALAGKLSAVAEGRAKYSLLLTDDGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------EHTFS 111
++ + + ++ + + + +V + + +++ + T +
Sbjct: 111 LVVANAANAETDLAEFTKRCAQFDVTVTDESAQTALVAVQGPKAVEIVLAALQKADTTLN 170
Query: 112 NSSFIDERF-------------------------------SIADVLLHRTW---GHNEKI 137
D R+ + A L + G + I
Sbjct: 171 PDEVRDVRYYRCLTGELDGFPVLVARTGYTREDGYELYVPAEAAEHLWQLLLDAGGGDLI 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + + I+P A + + I+ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTN-IYPSQAGLGRV--INFKKEGDFVGR--SALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ + +G + + +A+A +D +
Sbjct: 286 DATADRVLVGLAGEGRRAGRAGYAVVNEGKAVGAITSGILSPTLGHPIAMAFVDPDVAEV 345
Query: 252 KKGMALTVHGVRVKASF 268
+ + V G +
Sbjct: 346 GTSLNVDVRGKAFTVTV 362
>gi|225698148|pdb|3GIR|A Chain A, Crystal Structure Of Glycine Cleavage System
Aminomethyltransferase T From Bartonella Henselae
Length = 393
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 39/201 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL + D L +R S +L + IL +++++ E F+
Sbjct: 82 SHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFM 141
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSW----------- 104
L + + +L R+ V++ +Q +
Sbjct: 142 LVANAGNAQADFAELEK---RAFGFECQVIALERVLLALQGPQAAAVLADAGLPGNELLF 198
Query: 105 ------NQEHTFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
Q+ + S + E A L + G + + LR+
Sbjct: 199 MQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEKLLGDSRVEWVGLAARDSLRLEA 258
Query: 152 GIVDPNTDFLPSTIFPHDALM 172
G+ D P T P DA +
Sbjct: 259 GLCLHGNDITPDTT-PIDAAL 278
>gi|289426216|ref|ZP_06427962.1| aminomethyltransferase [Propionibacterium acnes SK187]
gi|289426829|ref|ZP_06428555.1| aminomethyltransferase [Propionibacterium acnes J165]
gi|289153381|gb|EFD02096.1| aminomethyltransferase [Propionibacterium acnes SK187]
gi|289159918|gb|EFD08096.1| aminomethyltransferase [Propionibacterium acnes J165]
gi|313764749|gb|EFS36113.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA1]
gi|313791799|gb|EFS39910.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA1]
gi|313802114|gb|EFS43346.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA2]
gi|313815814|gb|EFS53528.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA1]
gi|313818277|gb|EFS55991.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA2]
gi|313820039|gb|EFS57753.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA1]
gi|313823152|gb|EFS60866.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA2]
gi|313825571|gb|EFS63285.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA1]
gi|313827809|gb|EFS65523.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA2]
gi|313838446|gb|EFS76160.1| glycine cleavage system T protein [Propionibacterium acnes
HL086PA1]
gi|314915241|gb|EFS79072.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA4]
gi|314919794|gb|EFS83625.1| glycine cleavage system T protein [Propionibacterium acnes
HL050PA3]
gi|314925461|gb|EFS89292.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA3]
gi|314931808|gb|EFS95639.1| glycine cleavage system T protein [Propionibacterium acnes
HL067PA1]
gi|314955965|gb|EFT00363.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA1]
gi|314958360|gb|EFT02463.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA1]
gi|314960288|gb|EFT04390.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA2]
gi|314963097|gb|EFT07197.1| glycine cleavage system T protein [Propionibacterium acnes
HL082PA1]
gi|314968067|gb|EFT12166.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA1]
gi|314978275|gb|EFT22369.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA2]
gi|314987739|gb|EFT31830.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA2]
gi|314990217|gb|EFT34308.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA3]
gi|315077561|gb|EFT49619.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA2]
gi|315080345|gb|EFT52321.1| glycine cleavage system T protein [Propionibacterium acnes
HL078PA1]
gi|315084604|gb|EFT56580.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA2]
gi|315085940|gb|EFT57916.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA3]
gi|315088642|gb|EFT60618.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA1]
gi|315098251|gb|EFT70227.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA2]
gi|315108251|gb|EFT80227.1| glycine cleavage system T protein [Propionibacterium acnes
HL030PA2]
gi|327332223|gb|EGE73960.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA3]
gi|327442845|gb|EGE89499.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA2]
gi|327451067|gb|EGE97721.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA3]
gi|327452851|gb|EGE99505.1| glycine cleavage system T protein [Propionibacterium acnes
HL092PA1]
gi|327453578|gb|EGF00233.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA2]
gi|328753101|gb|EGF66717.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA1]
gi|328753755|gb|EGF67371.1| glycine cleavage system T protein [Propionibacterium acnes
HL020PA1]
gi|328759155|gb|EGF72771.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA2]
gi|332675161|gb|AEE71977.1| aminomethyltransferase [Propionibacterium acnes 266]
Length = 371
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ + +G + + +A+A +D
Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|313807231|gb|EFS45718.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA2]
Length = 371
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ + +G + + +A+A +D
Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|319779098|ref|YP_004130011.1| Aminomethyltransferase (glycine cleavage system T protein)
[Taylorella equigenitalis MCE9]
gi|317109122|gb|ADU91868.1| Aminomethyltransferase (glycine cleavage system T protein)
[Taylorella equigenitalis MCE9]
Length = 359
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 12 IKVCGKSAIPFLQAIITADVLTL--PYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
I + G + FL+ +++ D+L + A S +L +G I+ + +++ + L +
Sbjct: 56 IDLSGTRIVDFLRKLLSNDILKISESPGKALYSCMLNEEGGIIDDLITYYVDDGDWRLVV 115
Query: 70 DRSKRDSLIDKLLF 83
+ DS ++ +
Sbjct: 116 NAGCADSDLEWISK 129
>gi|238490422|ref|XP_002376448.1| N,N-dimethylglycine oxidase, putative [Aspergillus flavus NRRL3357]
gi|220696861|gb|EED53202.1| N,N-dimethylglycine oxidase, putative [Aspergillus flavus NRRL3357]
Length = 846
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+V G ++ LQ + T D+ + +L G I +S++ ED F +
Sbjct: 511 EVSGPGSVDLLQRLTTGDITA-KPGTITYTLLLNDHGGIRSDIFVSRLSEDAFQI 564
>gi|169772507|ref|XP_001820722.1| NAD dehydrogenase [Aspergillus oryzae RIB40]
gi|83768583|dbj|BAE58720.1| unnamed protein product [Aspergillus oryzae]
Length = 846
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+V G ++ LQ + T D+ + +L G I +S++ ED F +
Sbjct: 511 EVSGPGSVDLLQRLTTGDITA-KPGTITYTLLLNDHGGIRSDIFVSRLSEDAFQI 564
>gi|87119851|ref|ZP_01075747.1| sarcosine oxidase, alpha subunit family protein [Marinomonas sp.
MED121]
gi|86164553|gb|EAQ65822.1| sarcosine oxidase, alpha subunit family protein [Marinomonas sp.
MED121]
Length = 973
Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 45/109 (41%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S ++V G A F+ I T L P R + + QG ++ + +IE+D
Sbjct: 639 IDVSTLGGLEVRGPDAAEFVNRIYTFAFLKQPVGKTRYAVLTNEQGVVIDDGVACRIEDD 698
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
+ + S D++ ++ + + + ++I + + N S
Sbjct: 699 HYYITATTSGVDAVYREMTKWNAQWRLDVDIANVTSAFSAVNVAGPLSR 747
>gi|163788409|ref|ZP_02182855.1| aminomethyltransferase [Flavobacteriales bacterium ALC-1]
gi|159876729|gb|EDP70787.1| aminomethyltransferase [Flavobacteriales bacterium ALC-1]
Length = 360
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G +A+ +Q + + D L A+ S + G ++ +I KI+++T++
Sbjct: 49 SHMGEFLIEGPNALALIQKVSSNDASKLEIGKAQYSCLPNDDGGVVDDLIIYKIKDETYL 108
Query: 67 LEIDRSKRD 75
L ++ S +
Sbjct: 109 LVVNASNIE 117
>gi|71065359|ref|YP_264086.1| glycine cleavage system aminomethyltransferase T [Psychrobacter
arcticus 273-4]
gi|71038344|gb|AAZ18652.1| aminomethyltransferase [Psychrobacter arcticus 273-4]
Length = 390
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLIS--KIEED 63
S+ + + G A +LQ ++ DV L A S +L +G I+ ++ EE
Sbjct: 60 SHMVIVDIKGLDAKAWLQKLLANDVDKLKTIGKALYSPMLNEEGGIIDDLIVYLSNSEET 119
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ 106
+ + + RD + + +V + + ++
Sbjct: 120 EYRIVSNAGTRDKDMAQFEKVAKDFDVTLTERTDLAMLAVQGP 162
>gi|27380862|ref|NP_772391.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
japonicum USDA 110]
gi|27354028|dbj|BAC51016.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA
110]
Length = 382
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 52/275 (18%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ +++ G + A L+ ++ D++ + R + G IL +++
Sbjct: 59 SHMGQLRLLPKSGRVEDAARALERLVPQDIVAIALGRQRYAQFTNADGGILDDLMVANFG 118
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--EHTFSNSSFIDER 119
D L ++ + + L + L + +I+ ++ E +
Sbjct: 119 -DHLFLVVNAACKAEDEAHLRAH-LSDDCVIDSLADRALIALQGPKAEAVLAKFCAKAPS 176
Query: 120 FSIADVLLHRTWG----------------HNEKIASDIKTY------------------H 145
D H G A+D +
Sbjct: 177 MKFMDAGPHEVAGIKCFVSRSGYTGEDGFEISVPAADAERLAKTLLENPDVVPIGLGARD 236
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D +T P +A ++ G + G E + +
Sbjct: 237 SLRLEAGLCLYGHDIDTATT-PVEAALEWSVQKSRRSGGARAGGFPGAEKILAHFDQGAA 295
Query: 201 RKRPMIITGTDDLPPSGSPILTDD---IEIGTLGV 232
R+R + G+ + D IG +
Sbjct: 296 RRRVGLRAQGRAPVREGALLFADSASAEPIGQVTS 330
>gi|295130319|ref|YP_003580982.1| aminomethyltransferase [Propionibacterium acnes SK137]
gi|291376985|gb|ADE00840.1| aminomethyltransferase [Propionibacterium acnes SK137]
gi|313772501|gb|EFS38467.1| glycine cleavage system T protein [Propionibacterium acnes
HL074PA1]
gi|313809736|gb|EFS47457.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA1]
gi|313830646|gb|EFS68360.1| glycine cleavage system T protein [Propionibacterium acnes
HL007PA1]
gi|313833866|gb|EFS71580.1| glycine cleavage system T protein [Propionibacterium acnes
HL056PA1]
gi|314973648|gb|EFT17744.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA1]
gi|314976241|gb|EFT20336.1| glycine cleavage system T protein [Propionibacterium acnes
HL045PA1]
gi|314983550|gb|EFT27642.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA1]
gi|315096267|gb|EFT68243.1| glycine cleavage system T protein [Propionibacterium acnes
HL038PA1]
gi|327325904|gb|EGE67694.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA2]
gi|327446217|gb|EGE92871.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA2]
gi|327447801|gb|EGE94455.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA1]
gi|328760599|gb|EGF74167.1| glycine cleavage system T protein [Propionibacterium acnes
HL099PA1]
Length = 371
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 31/317 (9%), Positives = 94/317 (29%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLTCRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ + +G + + +A+A +D
Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|18848284|gb|AAH24126.1| Dmgdh protein [Mus musculus]
Length = 633
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S+
Sbjct: 289 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 346
Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110
F+L + + R +V I+ I GV+
Sbjct: 347 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 406
Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140
S+ +F R S L + E A+ D
Sbjct: 407 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 466
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ ++ T P +A ++ + L K +IG++ + +I+
Sbjct: 467 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKAE 523
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TDD+ P G+ I +G + A A + +
Sbjct: 524 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 583
Query: 251 IKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 584 QQVEVELLGKNYPATII 600
>gi|88802806|ref|ZP_01118333.1| aminomethyltransferase [Polaribacter irgensii 23-P]
gi|88781664|gb|EAR12842.1| aminomethyltransferase [Polaribacter irgensii 23-P]
Length = 361
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ LQ +++ D L A+ S I+ L +++E+ ++
Sbjct: 49 SHMGEFLVSGAQALALLQKVMSNDASKLEIGDAQYSCFPNEDDGIVDDLLCYRLQENEYL 108
Query: 67 LEIDRSKRD 75
L ++ S +
Sbjct: 109 LVVNASNIE 117
>gi|300711406|ref|YP_003737220.1| sacrosine dehydrogenase/glycine cleavage T-protein [Halalkalicoccus
jeotgali B3]
gi|299125089|gb|ADJ15428.1| sacrosine dehydrogenase/glycine cleavage T-protein [Halalkalicoccus
jeotgali B3]
Length = 831
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 99/314 (31%), Gaps = 58/314 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS + I++ G+ A+ +Q + D+ + R S +L G +L ++++ E+ F
Sbjct: 510 LSRYTGIEITGEGALDCVQHLFANDLDS-SVGQVRYSPMLDHDGGVLADMAVTRLGENRF 568
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQ---------EHTFSNSS 114
+ + + + +V I+ + G+ + E SN +
Sbjct: 569 VATTGGGASATEHTRWIREHAPDDVRIDAHVSDQCGLGVWGPNAREVLQPLTEEDLSNDA 628
Query: 115 F---------------IDERFSIADVLLHRTWGHNEKIASDIKT--YHE----------- 146
F + R S L + E + + +
Sbjct: 629 FGYFRAKEFYIDSIPVLALRVSYVGELGWELYAPTE-YGGRLWDLIWEQGREHDMVALGN 687
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G TD P P +A + + +IG++ + + ++
Sbjct: 688 GAFLGSLRLEKGYRLWGTDLTPEHD-PDEAGIGF--AVDTDTD-FIGRDALVEARETDLD 743
Query: 201 RKR-PMIITGTDDLPPSGSPILTDDIEIGTL------GVVVGKKALAIARIDKVDHAIKK 253
R+ PM ++ G+PIL + +G + + A + + +
Sbjct: 744 REIVPMTFDRDGEIVDGGTPILDGEEVLGHVKAADYGYSIDAGIAYGYLPPEYAEAGVAL 803
Query: 254 GMALTVHGVRVKAS 267
V +
Sbjct: 804 ETEFEGKRYPVTVA 817
>gi|89056111|ref|YP_511562.1| glycine cleavage system T protein [Jannaschia sp. CCS1]
gi|88865660|gb|ABD56537.1| glycine cleavage system T protein [Jannaschia sp. CCS1]
Length = 366
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 75/253 (29%), Gaps = 48/253 (18%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82
L+A++ DVL L R G +L +I++ D L ++ + + I L
Sbjct: 68 LEALVPVDVLGLAEGRQRYGFFTNDTGGVLDDLMIAR-GPDGLFLVVNAGCKAADIAHLR 126
Query: 83 FY-----KLRSNVIIEIQPI-------------------NGVVLSWNQEHTFS------- 111
+ + ++ +Q + ++W+ +
Sbjct: 127 AHMNGVEVIEDRALLALQGPKADAALAKLIPGAADMRFMDSTRMAWDGAELWISRSGYTS 186
Query: 112 ----NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
S D+R A+ + + LR+ G+ D P +I P
Sbjct: 187 EDGFEISIPDKR---AEAFARALLADDRVQPIGLGARDSLRLEAGLPLYGQDMTP-SISP 242
Query: 168 HDALMDLLNGI-----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
+A G G + G EV+ R+R ++ +G I
Sbjct: 243 VEAGQAWAIGKVRRTGGDRAGGFPGAEVLLDQLANGAPRRRAGLLPEGRAPMRAGVEIFA 302
Query: 223 D---DIEIGTLGV 232
IG +
Sbjct: 303 SPDTQTPIGVVTS 315
>gi|49475981|ref|YP_034022.1| glycine cleavage system aminomethyltransferase T [Bartonella
henselae str. Houston-1]
gi|49238789|emb|CAF28058.1| Glycine cleavage system protein t [Bartonella henselae str.
Houston-1]
Length = 372
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 39/201 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G A+ FL + D L +R S +L + IL +++++ E F+
Sbjct: 61 SHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFM 120
Query: 67 LEIDRSKRDSLIDKLLFYKLRS-----------NVIIEIQPINGVVLSW----------- 104
L + + +L R+ V++ +Q +
Sbjct: 121 LVANAGNAQADFAELEK---RAFGFECQVIALERVLLALQGPQAAAVLADAGLPGNELLF 177
Query: 105 ------NQEHTFSNSSFIDE-------RFSIADVLLHRTWGHNEKIASDIKTYHELRINH 151
Q+ + S + E A L + G + + LR+
Sbjct: 178 MQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEKLLGDSRVEWVGLAARDSLRLEA 237
Query: 152 GIVDPNTDFLPSTIFPHDALM 172
G+ D P T P DA +
Sbjct: 238 GLCLHGNDITPDTT-PIDAAL 257
>gi|241667113|ref|YP_002985197.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240862570|gb|ACS60235.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 985
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 63/302 (20%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL I L AR +L G I S+ +
Sbjct: 646 LCDVSTLGKIEISGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 705
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
+ F + + ++ L F +++ P + +L +
Sbjct: 706 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILQEIVD 765
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160
S+++F + + G +I+ + +EL + G + D
Sbjct: 766 EDLSDAAFPFMSARKVSLFGGQLEGRLFRISFSGELAYELAVPAGYGEGVADAIMAAGEK 825
Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ T+ P D + +S TK +IG+ +++R
Sbjct: 826 HGICAYGAEALGVMRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKALLAREG 883
Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241
++ R+R + + + +GS IL D + G + LA+
Sbjct: 884 LQDPDRQRLVGVKPLNPATGFRTGSHILADGVAATLENDQGYVTSSAFSPGLGHTIGLAL 943
Query: 242 AR 243
R
Sbjct: 944 VR 945
>gi|254282757|ref|ZP_04957725.1| aminomethyltransferase [gamma proteobacterium NOR51-B]
gi|219678960|gb|EED35309.1| aminomethyltransferase [gamma proteobacterium NOR51-B]
Length = 381
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 43/319 (13%), Positives = 94/319 (29%), Gaps = 80/319 (25%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67
+V G A FL I T + + + QG ++ + + E F +
Sbjct: 61 QVTGTDAQVFLDKISTRSMA-IKPGRVTYTCWTNAQGMLVDDGTVFRFSETEFRMLPNSR 119
Query: 68 --EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF--------------- 110
+ + + L +V + N L+ +
Sbjct: 120 DDDYYAQQAEGL-----------DVEVTDVSHNSAALTVQGKTAATVLTRMGIKNLVDMK 168
Query: 111 ---------SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE--------------- 146
+ R L + W +++ + +
Sbjct: 169 PFDFATFDSPAGELMISRTGFFGDLGYELWFSLDQVEA---VWDAVLAAGALPVGIVTLC 225
Query: 147 -LRINHG--IVDPNTDFLPSTI----------FPHDALMDLLNGISLTKGCYIGQEVVSR 193
R+ G I D + P+ P D + + I+L KG ++G++ +
Sbjct: 226 NARLEAGHIIPDNEFELEPAKYDGSEPDSFNRTPFDLGLGFV--INLDKGDFVGRDALIA 283
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDH 249
+ R + + D + + +E+G + V K++A+A +
Sbjct: 284 EKERGSTWQLVALELDCDHGAAQRDVVAVNGVEVGFVTSGLFSVNLGKSIALATVKSGST 343
Query: 250 AIKKGMALTVHGVRVKASF 268
+ ++ V+GV+V A
Sbjct: 344 SPGGSASVVVNGVKVDAVV 362
>gi|258544884|ref|ZP_05705118.1| sarcosine oxidase, alpha subunit [Cardiobacterium hominis ATCC
15826]
gi|258519804|gb|EEV88663.1| sarcosine oxidase, alpha subunit [Cardiobacterium hominis ATCC
15826]
Length = 999
Score = 44.8 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 97/308 (31%), Gaps = 68/308 (22%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ S I++ GK A FL + + L R +L G ++ + + I +
Sbjct: 657 AIDASTLGKIQIDGKDAREFLNRVYSNAWSKLEPGKCRYGLMLDENGMVMDDGVTACIHD 716
Query: 63 DTFILEIDRSKRDSLIDKLLFY--------------KLRSNVIIEIQPINGVVLSWN--- 105
+ F + ++D L + I + + +
Sbjct: 717 NQFYMTTTTGGAARVLDWLERWHQIEWPELDVWLTSVTDHWATIAVVGPESRAILQSLCD 776
Query: 106 --------------QEHTFSNSSFIDERFSIADVL-------------LHRTWGHNEKIA 138
+ T + + R S + L + +
Sbjct: 777 DIDFDRDAFKFMEWRAGTVAGIAARVFRISFSGELAYEINVAAGYGRHIWEAVMAAGAVP 836
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG-CYIGQEVVSRIQHR 197
+T H LR G + D +T P D M ++L K ++GQ ++R
Sbjct: 837 YGTETMHVLRAEKGFIIVGQD-TDATQTPFDLGMPW--AVNLKKPYSFLGQRSLARSDTA 893
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILT-----------DDIEIGTLG-------VVVGKK 237
RK+ + + D + P G+ I+ DD + +LG V +
Sbjct: 894 RAGRKQLVGLLAADPHTVLPEGAQIIATADPAVPRAGSDDPPVASLGYITSSYHSVALGR 953
Query: 238 ALAIARID 245
++A+A I+
Sbjct: 954 SIALANIE 961
>gi|218462210|ref|ZP_03502301.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli
Kim 5]
Length = 321
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 93/300 (31%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ S +++
Sbjct: 14 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHV-DDHLFVVVNASCKET 72
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 73 DLAHLQAHIGDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 132
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A + R H + A + LR+ G+ D
Sbjct: 133 VSRSGYSGEDGFEISIPTDKAVDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 192
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G G + G + R+R + + P G
Sbjct: 193 TTS-PVEAALEWAMQKARRGNGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 250
Query: 218 -SPILTDD---IEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D +EIG + V G A+ + + + + S
Sbjct: 251 HARLYADAEGKVEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTLIYAEVRGKYLPITVS 310
>gi|219127634|ref|XP_002184037.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404760|gb|EEC44706.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 661
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 45/168 (26%)
Query: 143 TYHELRINHGIVDPNTDFLPST-------IFPHDALMDLLNGISLTKGCYIGQEVVSR-I 194
+ LRI G V + L + P + +D I++ KGCY+GQE ++ +
Sbjct: 300 EFESLRIESGSVGFEREMLANQKDSFLAPPTPLELHLDYT--INMEKGCYLGQEGIASVV 357
Query: 195 QHRNIIRKRPMIITGTDD--------------------LPPSGSPIL----TDDIEIGTL 230
++ + + DD +P +G + +IE+G L
Sbjct: 358 KNPRGPPRMLYQVVFDDDFNVYDYQSAGDRSIVENLTRVPRAGDKVFVLGSNAEIEVGVL 417
Query: 231 GVVVG--------KKALAIARIDKVDHAIKKGMALTVH-GVRVKASFP 269
V LA+ R + D IKK A + R++ P
Sbjct: 418 TSVAEPGSTGEPVTVGLALVR--RADSIIKKMKAKNLEINRRIEVDTP 463
>gi|75675478|ref|YP_317899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter
winogradskyi Nb-255]
gi|74420348|gb|ABA04547.1| glycine cleavage system T protein [Nitrobacter winogradskyi Nb-255]
Length = 383
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 84/277 (30%), Gaps = 51/277 (18%)
Query: 7 SNQSFIKV---CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I + G A L+ ++ D++ + R + P G +L +++
Sbjct: 60 SHMGQIALRPKSGDVRDAALALERLVPQDIVAVAPGRQRYAQFTNPAGGLLDDLMVANFG 119
Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
D L ++ + + + L + L +I +Q + +
Sbjct: 120 -DHLFLVVNGACKAADEAHLREHLSDACAIEVLTDRALIALQGPKAASVLAKKCPEVPAM 178
Query: 114 SFID--ER-------------------------FSIADVLLHRTWGHNEKIASDIKTYHE 146
F++ R + A+ ++ + +
Sbjct: 179 KFMEAGPRQVGGVACFVSRSGYTGEDGYEISIPAARAEDVVSALLDDPDVAPVGLGARDS 238
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNI 199
LR+ G+ D +T P +A ++ G+ G + G V+ +
Sbjct: 239 LRLEAGLCLYGHDIG-ATTTPVEAALEWSVQKSRRSGGV--RAGGFPGANVILPQFEQGA 295
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK 236
R+R + G+P+ D ++G V
Sbjct: 296 ARRRVGLRPEGRAPVREGAPLFADAASADSIGAVTSG 332
>gi|222081882|ref|YP_002541247.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter
K84]
gi|221726561|gb|ACM29650.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter
K84]
Length = 977
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 95/301 (31%), Gaps = 63/301 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I++ GK A FL I L AR +L G I S++ E+
Sbjct: 639 CDVSTLGKIEIHGKDAATFLDRIYCNGFAKLAVGKARYGIMLREDGMIYDDGTTSRLSEE 698
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQEH 108
F + + ++ L F +E+ P + +LS +
Sbjct: 699 HFFMTTTTALAAGVLTHLEFCAQTLWPELEVYFASSTDQWAQMAVAGPKSRAILSEIVDE 758
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF-------- 160
S+++F + + G +I+ + +EL + G + D
Sbjct: 759 DLSDAAFPFMSARPVTLFGGKLEGRLFRISFSGELAYELAVPAGYGEWVADAIMQAGEKH 818
Query: 161 ------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ T+ P D + +S TK +IG+ +++R
Sbjct: 819 GICPYGAEALGVMRIEKGHVTHAEINGTVTPGDLGFGRM--VSATKTDFIGKAMLAREGL 876
Query: 197 RNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAIA 242
++ R R + + D +G+ IL D G + LA+
Sbjct: 877 QSSDRPRLVGVKPLDPATSFRTGAHILADGAAATLENDQGYVTSSAFSPTLGHTIGLALV 936
Query: 243 R 243
+
Sbjct: 937 K 937
>gi|219120440|ref|XP_002180958.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217407674|gb|EEC47610.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
Length = 854
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 94/289 (32%), Gaps = 61/289 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G A FL + TA+V + + + L QG + I+K+ E+ F++
Sbjct: 529 HVQGNDAGKFLNRLSTANVDG-DWGMITYTQWLDEQGYMAADLTITKMAENHFMVV---- 583
Query: 73 KRDSLIDKLLFYKLRSNVIIE---IQPINGVVLSWNQEHTFSN-----------SSFIDE 118
D++++K+ + L V E + + G N + S ++F
Sbjct: 584 ATDTMLNKVYSHMLDRLVHGEHVFVTDVTGRYAQLNLQGPRSRELLQGLTSVDLNNFAFR 643
Query: 119 RFSIADVLLHRTWGHNEKIASDI------KTYHELRINHGIVDPNTDFLPSTIFP----- 167
R D+ L R ++ + IV+ +F S
Sbjct: 644 RAEEIDIGLARVLCIRITYVGELGYELFVPVEQARHVYDCIVELGREFSLSHAGLKALGS 703
Query: 168 -------HDALMDLLN-------GISL-----TKGCYIGQEVVS----RIQHRNIIRKRP 204
D D+ N G+ +G +IGQ+ V + R + KR
Sbjct: 704 LRMEKGYRDYGHDMDNTDRLLDCGLGFTCDFEKEGGFIGQKHVLAQKDAAKERGGLLKRI 763
Query: 205 MIITGTDDLP--PSGSPILTDDIEIGTLG------VVVGKKALAIARID 245
+ + D P G + D I + V G L++ D
Sbjct: 764 VNVLVLDPAPLLHHGEILWKDGRRISDIRAASYGHTVGGAVGLSMLTRD 812
>gi|307727855|ref|YP_003911068.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1003]
gi|307588380|gb|ADN61777.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1003]
Length = 1000
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 83/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G I + ++ E ++
Sbjct: 666 STLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLGEQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99
+ ++ L ++R V+ ++ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144
++ +E T + ++ R S + L + E + + Y
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEYDITP 845
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ PHD M L S ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGMSGLVAKSKD---FLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLADDPSFVIPEGSQIVAG 928
>gi|86605926|ref|YP_474689.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
JA-3-3Ab]
gi|86554468|gb|ABC99426.1| glycine cleavage system T protein [Synechococcus sp. JA-3-3Ab]
Length = 378
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 95/313 (30%), Gaps = 65/313 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G L ++ +D+ + AR + +L P G I+ + + + +
Sbjct: 54 SHMGKFDLWGPELGSHLSRLVPSDLGAVAVGSARYTVLLNPLGGIVDDVIFYRHPPEGEL 113
Query: 67 ----LEIDRSKRD--------------SLIDKLLFYKLRSNVIIEIQPING-------VV 101
L ++ + R L D S V++ +Q +
Sbjct: 114 EHWSLIVNAATRQKDWEWLHQQGIPGLELQDHTE-----SQVLLAVQGPAAEEVLQPFLA 168
Query: 102 LSWNQEHTFSNSSFID--ERFSIADVLLHRTWGHNEK-------IASDIKTY-------- 144
S F + F ER S A V + RT E A + +
Sbjct: 169 GSLRALRRFQHGQFATRKERSSGAGVFVARTGYTGEDGFELLLGPADGLWLWEQLVQAGV 228
Query: 145 --------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
LR+ D + P +A + L +S G YIG+ + +
Sbjct: 229 QPCGLGCRDTLRLEAAFCLYGQDI-DESTTPLEADLGWL--VS-NPGDYIGKPALESQRQ 284
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVG----KKALAIARIDKVDHA 250
+ I R+ +P G I + IG + + + +D
Sbjct: 285 QGIPRRLVGFRLLERAIPRRGYAIYAPNSPEPIGRVTSGTHSPTLGYGIGLGYVDSTWAK 344
Query: 251 IKKGMALTVHGVR 263
+ + + + G R
Sbjct: 345 VGSRLEIEIRGQR 357
>gi|86138496|ref|ZP_01057070.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
MED193]
gi|85825021|gb|EAQ45222.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
MED193]
Length = 1010
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TL R + + G + ++++I+EDT++
Sbjct: 679 VKGPDAGKFLDMMYTNMMSTLKVGKCRYGLMCSENGFLSDDGVVARIDEDTWLCHTTTGG 738
Query: 74 RDSLIDKL 81
DS+ +
Sbjct: 739 ADSIHAHM 746
>gi|307317067|ref|ZP_07596508.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83]
gi|306897155|gb|EFN27900.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83]
Length = 379
Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 90/303 (29%), Gaps = 57/303 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L+ ++ ADVL L R G IL +I D L ++ + +D+
Sbjct: 71 EDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNRG-DHLFLVVNAACKDA 129
Query: 77 LIDKLL----------FYKLRSNVIIEIQ-PINGVVLS--WNQ----------EHTFSNS 113
+ L L +I +Q P G VL W E +
Sbjct: 130 DLAHLKDGLGSVCDVTM--LTDRALIALQGPRAGAVLCELWADVSSMRFMDVAEADLHDV 187
Query: 114 SFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYHELRINHGIVDPNTD 159
S I R R H + + + LR+ G+ D
Sbjct: 188 SCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSLRLEAGLCLYGND 247
Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
+T P +A ++ G + G + + R+R + + P
Sbjct: 248 IDTNTS-PIEAGLEWAIQKSRRAGGERAGGFPGAGRILAELTDGVSRRR-VGLRPEGRAP 305
Query: 215 PSGSPILTDDIE----IGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRV 264
G+ L D E GT+ V G A+ + + + + + +
Sbjct: 306 VRGNANLFADAEGRTAAGTVTSGGFGPSVDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPI 365
Query: 265 KAS 267
+
Sbjct: 366 AVT 368
>gi|218674309|ref|ZP_03523978.1| FAD dependent oxidoreductase [Rhizobium etli GR56]
Length = 394
Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 79/278 (28%), Gaps = 56/278 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
+ G+ A L I DV P + +L +G I +++I ED + +
Sbjct: 74 LKGRDAEAALSWIAANDVAR-PEGSLIYTQMLNDKGGIECDLTVARIAEDEYYIVTGTGF 132
Query: 69 -----------IDRSKRDSLIDKLLFYKL--------RS---NVIIEIQPINGVVLSWNQ 106
I L+D Y + R+ V ++ + Q
Sbjct: 133 ATHDFNWIARNIPAELHAELVDVTSAYSVLSLMGPNARAVLEKVTGS--DVSNAAFPFGQ 190
Query: 107 EHT--FSNSSFIDERFSIADVLLH-----------------RTWGHNEKIASDIKTYHEL 147
T S R + L + G + + +
Sbjct: 191 VRTIGISGCPVRALRITYVGELGYELHIPIEYATTVYDVLMAAGGELGLVNAGYRAIESC 250
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ G +D P P +A + + + K + G++ + R + ++
Sbjct: 251 RLEKGYRAWGSDIGPDHT-PVEAGLGW--AVKVRKNIPFRGRQAIERQLKEGVKKRLACF 307
Query: 207 ITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALAIAR 243
+ D G I D +G L G + +
Sbjct: 308 VPDDPDTVLLGRETIYRDGKRVGWLSS--GGFGYTLGK 343
>gi|17017279|gb|AAL33597.1| glycine cleavage complex T-protein [Zea mays]
Length = 401
Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 95/304 (31%), Gaps = 52/304 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK IPFL+ ++ D+ L S + +G + +I+K+ +D L ++
Sbjct: 89 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 148
Query: 72 SKRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHT---------------FS 111
R+ + + ++ V I ++ F
Sbjct: 149 GCREKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSQVYFG 208
Query: 112 NSSFID--------ERFSIADVLLHRTWGHNEKIA----------------SDIKTYHEL 147
+F+D R NE + + L
Sbjct: 209 QFTFLDINGFPCYLTRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGLGARDSL 268
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206
R+ G+ D I P +A + G +G ++G EV+ + ++R
Sbjct: 269 RLEAGLCLYGNDLE-QHITPIEAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVGF 327
Query: 207 ITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVHG 261
I+ + S I + IG + KK +A+ + +H + + V G
Sbjct: 328 IS-SGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVRG 386
Query: 262 VRVK 265
+
Sbjct: 387 KPYE 390
>gi|294083833|ref|YP_003550590.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663405|gb|ADE38506.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 786
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 80/282 (28%), Gaps = 48/282 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A L + ++ P A + ++ +G I + +++++
Sbjct: 467 SSFGKISITGRDAESMLNRLCANNMSR-PAGRATYTTMVNEKGGIKSDLTSLRFDDESYR 525
Query: 67 LEIDRSKRDSLIDKLLFYK-LRSNVIIEIQPINGVVLS------------WNQEHTFSNS 113
L + S + L + V I I ++ + +
Sbjct: 526 LYVGSSAIKRDLAWLREHVNANEQVEIHDHTIQFATIAVMGPKASVMMRSLGADWLDALG 585
Query: 114 SFIDERFSIADVL---------LHRTWGHNEKIASDIKTYHEL----------------R 148
F R IA ++ W + Y+ L R
Sbjct: 586 YFTHARNEIAGIMVDAVRLSYVGEAGWELTCACEDAERLYNVLNEAGARPAGTLAQSSMR 645
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MII 207
I + + P A + + +IG E + + + + +
Sbjct: 646 IEKQFLAYGHELDTDVS-PMMAGLAFTIDMQYP---FIGHEAIQKAMETPAKQTIVSLRL 701
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARID 245
D +P P+ D IG LA+A ID
Sbjct: 702 ADVDAVPLGNEPVYHDGQIIGKTTSASFGYRIGCPLALAYID 743
>gi|257055900|ref|YP_003133732.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
gi|256585772|gb|ACU96905.1| glycine cleavage system T protein (aminomethyltransferase)
[Saccharomonospora viridis DSM 43017]
Length = 925
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 90/267 (33%), Gaps = 57/267 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G + L + T + TL R + G +L + +++E+ ++
Sbjct: 588 STLGKIDVQGPDSGVLLDRLYTNMMSTLRVGRVRYGVMCGNDGMVLDDGTVLRLDENRYL 647
Query: 67 LEIDRSKRDSLID---------------KLL--------FYKL--RS-NVIIEIQPINGV 100
+ +++D L F + RS +VI + P V
Sbjct: 648 ITTTTGGAATVLDWMEEWLQTEWPELRVHLTSVTEQWSVFPVVGPRSRDVIGAVFPDLDV 707
Query: 101 ------VLSWNQEHTFSNSSFIDERFSI--------------ADVLLHRTWGHNEK---I 137
++W + T + R S A L R EK
Sbjct: 708 SNEAFPFMTWR-DTTLDDIPVRIARISFSGELAYEVNVNSWYAPALWQRLLAAGEKYGIT 766
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G D T+ P D M + +S K +IG+ +R ++
Sbjct: 767 PYGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSWV--VSKKKDDFIGKRSFARPENN 823
Query: 198 NIIRKR---PMIITGTDDLPPSGSPIL 221
N RK+ + + G LP GS I+
Sbjct: 824 NPQRKQLVSLLPVDGRTRLPE-GSQIV 849
>gi|195435113|ref|XP_002065546.1| GK14613 [Drosophila willistoni]
gi|194161631|gb|EDW76532.1| GK14613 [Drosophila willistoni]
Length = 409
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 64/308 (20%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK A ++ I TAD+L LP + G IL +++K+ E + + +
Sbjct: 84 VRGKDAATCMETICTADILGLPNGSGTLTVFTNDNGGILDDLIVNKVNEKELYVVSNAAM 143
Query: 74 RD-------SLIDKLLFYKLRSNVIIE--IQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ S + +V IE ++ + + + + D
Sbjct: 144 KQQDMNIMSSAVSHFKSQG--KDVSIEFLTPSDQSLIAIQGPQAVAELAKLLAPQTQSLD 201
Query: 125 V-----------------------------------------LLHRTWGHNEKIASDIKT 143
L + + + +
Sbjct: 202 QLYFMNSSTFNVNGLTNIRITRCGYTGEDGVEVSVPSTQVTSLTEALLANGKLKLAGLGA 261
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ G+ +D T P +A + L TK + G E V + + +
Sbjct: 262 RDSLRLEAGLCLYGSDIDTQTT-PIEAALAWLVAKRRRATKD-FPGAETVLKQLKEGVSK 319
Query: 202 KRP-MIITGTDDLPP-SGSPILTDDIE--IGTLGVVV----GKKALAIARIDKVDHAIKK 253
+R + + GT P SG I D+ + +G + +A+ I + +
Sbjct: 320 RRVGLKMLGTKPPPARSGIQIFNDEGKELVGQITSGCPSPSIGSNIAMGYIQEKLKKVGT 379
Query: 254 GMALTVHG 261
+ L V
Sbjct: 380 RVQLKVRD 387
>gi|167041170|gb|ABZ05929.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_001B09]
Length = 998
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ I + G FL I T + LP AR +L G + ++I E+
Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 721
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122
F + ++ +++ L +Y V + P V VLS ++ + + + R +
Sbjct: 722 HFHMTTTTAQAVNVLAHLEYY---LQV---VWPELNVNVLSTTEQWAGAALAGPNSR-EL 774
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLT 181
L T NE + Y E + G+ S ++ ++ G
Sbjct: 775 LSKLFPETNILNEAL--PFMGYKESDL-FGVPARIFRISFSGELAYEINVESSYGTFMWE 831
Query: 182 KGCYIGQEVVS 192
K GQE+
Sbjct: 832 KIIEFGQEMNI 842
>gi|33593499|ref|NP_881143.1| sarcosine oxidase alpha subunit [Bordetella pertussis Tohama I]
gi|33572855|emb|CAE42788.1| sarcosine oxidase alpha subunit [Bordetella pertussis Tohama I]
gi|332382907|gb|AEE67754.1| sarcosine oxidase alpha subunit [Bordetella pertussis CS]
Length = 979
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 66/327 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V +S I+V G A FL + + TL AR +L G + I++ E
Sbjct: 646 VDVSTLGKIEVQGPDAGVFLDRVYANRISTLKVGKARYGVLLREDGIVFDDGTIARWGER 705
Query: 64 TFILEIDRSKRDSLIDKLLF--------YKLR---------------------------- 87
FIL + +++ F ++R
Sbjct: 706 LFILSTTTANAAAVMSHFEFLLATAWPTLRVRVTSVTDHYAQIALAGPKSREVLERLQIS 765
Query: 88 SNVIIEIQPINGVVLS-WNQEHTFS-NSSFIDER---FSIADVLLHRTWGHNEKIASDI- 141
++V P V + WN SF ER +IA R W + +
Sbjct: 766 ADVTDSALPHMAVCETVWNGLKLLIYRVSFSGERAYELAIAAAYGQRLWDQLLAVGAPFS 825
Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ LRI G L D + G+ +G ++G+ ++ R
Sbjct: 826 IMPYGTEAMGALRIEKGHPAGPE--LDGRTTAADLGL---GGLVKKEGAFVGKALLGREG 880
Query: 196 HRNIIRKRPMIITGTDDLP-PSGSPIL----TDDIEIGTLGVVV------GKKALAIA-- 242
+ R + + SGS ++ E+G + AL
Sbjct: 881 LQAADRPTLVGLRSKSGAAIQSGSMLVLRAEVGAQELGWVASATYSPTLGQHIALGFLVN 940
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFP 269
+ + ++ ALT V V+ P
Sbjct: 941 GANALGRSVLAWSALTSSQVEVEVVNP 967
>gi|323527817|ref|YP_004229970.1| glycine cleavage system T protein [Burkholderia sp. CCGE1001]
gi|323384819|gb|ADX56910.1| glycine cleavage system T protein [Burkholderia sp. CCGE1001]
Length = 372
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGARVRAFFEYALANNVGKLQTPGRALYSCLLNPQGGVIDDLIVYYFGEEHF 111
Query: 66 ILEIDRSKRDSLIDKLL 82
+ ++ + I
Sbjct: 112 RVVVNAGTAEKDIAWFK 128
>gi|158334699|ref|YP_001515871.1| glycine cleavage system T protein [Acaryochloris marina MBIC11017]
gi|158304940|gb|ABW26557.1| glycine cleavage system T protein [Acaryochloris marina MBIC11017]
Length = 374
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 82/284 (28%), Gaps = 63/284 (22%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS--------------------KIEE 62
LQ ++ +D+ L A+ S L Q I+ + ++
Sbjct: 75 LQPLVPSDLSQLEPGQAKYSVFLNEQAGIIDDLIFYFEGISDSGAEIGKLIVNASTTAKD 134
Query: 63 DTFILE-IDRSKR----------------DSLIDKLLF-----------YKLRSNVIIEI 94
++LE + I L Y+ +S I
Sbjct: 135 KAWLLENVSAEAIGFEDVSDSHVLIAVQGPDAISTLQRFTPTDLSAIRNYRHQSG-TILE 193
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIV 154
QP + E F +D L +T + LR+ +
Sbjct: 194 QPAWFARTGYTGEDGFE--VMVDPE---TGKKLWQTLLEAGVAPCGLGARDTLRLEAAMA 248
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
D T P++A + L ++L +G +IGQ+ + + Q RK + +
Sbjct: 249 LYGQDI-NDTTTPYEAGLGWL--VNLDQGEFIGQDTLKKQQAEGPPRKLVALEMQGRHIA 305
Query: 215 PSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIK 252
P+ +D E+G + ALA +
Sbjct: 306 RHDYPVWVNDQEVGIVTSGSFSPTLGKSIALAYVPTAYAKSGTE 349
>gi|209524452|ref|ZP_03273001.1| glycine cleavage system T protein [Arthrospira maxima CS-328]
gi|209495243|gb|EDZ95549.1| glycine cleavage system T protein [Arthrospira maxima CS-328]
Length = 370
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 55/294 (18%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLIS------KIEEDTFILEIDRSKRDS----LIDK 80
+ L A+ + +L G IL + ++ ++ + + ++
Sbjct: 77 LSRLQPGQAQYTVLLNGSGGILDDVIFYYQGLDPATGNQRGMMIVNAATKSRDKAWVVAH 136
Query: 81 LLFYKL------RSNVIIEIQ--------------PINGVVLSWNQEHTFSNSSFIDERF 120
L + RS V+I +Q ++ V + E T R
Sbjct: 137 LEGTGVALEDLSRSQVLIAVQGPQAEAVLGSLVEADLSAVANFGHIETTLFGKPAFIART 196
Query: 121 -------------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
V L R + LR+ + D + P
Sbjct: 197 GYTGEDGFEVMVNPDTGVNLFRELIEVGATPCGLGARDTLRLEAAMALYGQDIDTHST-P 255
Query: 168 HDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDD-LPPSGSPILTDDI 225
+A + L I KG +IG+E + Q + +R + + + G +
Sbjct: 256 LEAGLGWL--IHWDEKGDFIGRESL-EAQKSGGLSRRLVGLEMQGRYIARHGYSVKAGGE 312
Query: 226 EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+G + ALA ++ + + + +Y+
Sbjct: 313 VVGEITSGTMSPTLGKAIALAYVPVELAKIGSQVEVEIRNQIYPATVVKRPFYR 366
>gi|163739969|ref|ZP_02147374.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter
gallaeciensis BS107]
gi|161386714|gb|EDQ11078.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter
gallaeciensis BS107]
Length = 1010
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + V G A FL + T + TL R + + G ++ ++++I+EDT++
Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCSENGFLIDDGVVARIDEDTWL 731
Query: 67 LEIDRSKRDSLIDKL 81
+ + +
Sbjct: 732 CHTTTGGAERIHGHM 746
>gi|84514578|ref|ZP_01001942.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
gi|84511629|gb|EAQ08082.1| aminomethyl transferase family protein [Loktanella vestfoldensis
SKA53]
Length = 814
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ LRI G D + +D I+ K ++G+ + + R + ++
Sbjct: 670 ALNALRIEKGYRAWKGDLSTDYSL-LEGGLDRF--INFDKPDFVGKPALLAEKQRGVAKR 726
Query: 203 RPMIITGTDDL--PPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKG 254
++ D P + I D +G V AL + R D K
Sbjct: 727 FVTLVLDDADAYDAPYMATISHDGAVVGETTSGAFGYRVGKSIALGMLRADLAVAGTKVA 786
Query: 255 MAL--TVHGVRVKASFPHW 271
+ + T V+ P W
Sbjct: 787 IDIYGTQVSATVQPDAPLW 805
>gi|303246601|ref|ZP_07332879.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ]
gi|302491941|gb|EFL51819.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ]
Length = 362
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 78/278 (28%), Gaps = 67/278 (24%)
Query: 13 KVCGKSAIPFLQAI-ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ G+ A L + +T D+ TL R +L G ++ +I ++ D+++L ++
Sbjct: 58 HLSGEGAASAL-GLAVTHDLETLAPGKCRYGFLLNDAGGVVDDLIIYCLDVDSYMLVVNG 116
Query: 72 SKRD--------------------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWN 105
++ L L F LR V + + +W
Sbjct: 117 ARIAVDFETVKSRLPAGLTFTDASAETAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFAWT 176
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------------HELRINH 151
F + R L + + +K + + LR+
Sbjct: 177 D---FDGQKLMVSRTGYTGELGYELFLPADKAVALWEALLADPRVAPAGLGARDTLRLEM 233
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-----IRKRPMI 206
G D P +A L + S ++ +R++ +
Sbjct: 234 GYPLYGQDL-DEEHTPAEAGYGWL--------------LTSPAEYAGKKGAGAVRQKLIA 278
Query: 207 ITGTDDLPPSGSPILTD--DIEIGTLGVVVGKKALAIA 242
+ + D +G + +L A
Sbjct: 279 LEIPGRRSARHGDAVKDKAGKTVGVVTSASFAPSLGHA 316
>gi|59808083|gb|AAH89599.1| Dimethylglycine dehydrogenase precursor [Mus musculus]
Length = 869
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S+
Sbjct: 525 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 582
Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110
F+L + + R +V I+ I GV+
Sbjct: 583 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 642
Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140
S+ +F R S L + E A+ D
Sbjct: 643 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 702
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ ++ T P +A ++ + L K +IG++ + +I+
Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKTE 759
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TDD+ P G+ I +G + A A + +
Sbjct: 760 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 819
Query: 251 IKKGMALTVHGVRVKAS 267
+ L
Sbjct: 820 QQVEAELLGKNYPATII 836
>gi|327330601|gb|EGE72347.1| glycine cleavage system T protein [Propionibacterium acnes
HL097PA1]
Length = 371
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 42/104 (40%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGSALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKA 154
>gi|33598020|ref|NP_885663.1| sarcosine oxidase alpha subunit [Bordetella parapertussis 12822]
gi|33574449|emb|CAE38787.1| sarcosine oxidase alpha subunit [Bordetella parapertussis]
Length = 979
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 66/327 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V +S I+V G A FL + + TL AR +L G + I++ E
Sbjct: 646 VDVSTLGKIEVQGPDAGVFLDRVYANRISTLKVGKARYGVLLREDGIVFDDGTIARWGER 705
Query: 64 TFILEIDRSKRDSLIDKLLF--------YKLR---------------------------- 87
FIL + +++ F ++R
Sbjct: 706 LFILSTTTANAAAVMSHFEFLLATAWPTLRVRVTSVTDHYAQIALAGPKSREVLERLQIS 765
Query: 88 SNVIIEIQPINGVVLS-WNQEHTFS-NSSFIDER---FSIADVLLHRTWGHNEKIASDI- 141
++V P V + WN SF ER +IA R W + +
Sbjct: 766 ADVTDSALPHMAVCETVWNGLKLLIYRVSFSGERAYELAIAAAYGQRLWDQLLAVGAPFS 825
Query: 142 ------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ LRI G L D + G+ +G ++G+ ++ R
Sbjct: 826 IMPYGTEAMGALRIEKGHPAGPE--LDGRTTAADLGL---GGLVKKEGAFVGKALLGREG 880
Query: 196 HRNIIRKRPMIITGTDDLP-PSGSPIL----TDDIEIGTLGVVV------GKKALAIA-- 242
+ R + + SGS ++ E+G + AL
Sbjct: 881 LQAADRPTLVGLRSKSGAAIQSGSMLVLRAEVGAQELGWVASATYSPTLGQHIALGFLVN 940
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFP 269
+ + ++ ALT V V+ P
Sbjct: 941 GANALGRSVLAWSALTSSQVEVEVVNP 967
>gi|83594381|ref|YP_428133.1| glycine cleavage system aminomethyltransferase T [Rhodospirillum
rubrum ATCC 11170]
gi|83577295|gb|ABC23846.1| Glycine cleavage system T protein [Rhodospirillum rubrum ATCC
11170]
Length = 375
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 45/266 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G I L+A++ D+ L R + + QG IL +++K +D F+
Sbjct: 61 SHMGQARLVGPQRIAALEALVPGDLEILKEGRQRYTVLTNDQGGILDDLMVTKRADDLFL 120
Query: 67 LEIDRSKRDSLIDKLLFY---------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ ++ + +D+ +D + + +L ++ +Q V + + + F+
Sbjct: 121 V-VNAACKDADLDHIEAHLAGFDARLERLPDTALLALQGPLAVSVLAGLDARAAEMGFMS 179
Query: 118 ERF--------------------------SIADVLLHRTWGHNEKIA-SDIKTYHELRIN 150
R+ + A + L +T NE +A + LR+
Sbjct: 180 GRWLSLCGVDCFVTRSGYTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSLRLE 239
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ +D T P +A + + G +G + G + + + R R
Sbjct: 240 AGLCLYGSDIDT-TTTPVEAGLSWIIGKRRRAEGGFPGASAIQQDLAQGPKRCRV----- 293
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG 235
P +P+ +G G VVG
Sbjct: 294 -GLRPEGKAPVRAHSAILGPQGEVVG 318
>gi|163761533|ref|ZP_02168605.1| sarcosine oxidase alpha subunit [Hoeflea phototrophica DFL-43]
gi|162281247|gb|EDQ31546.1| sarcosine oxidase alpha subunit [Hoeflea phototrophica DFL-43]
Length = 988
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A FL + L LP AR +L G I S++ + F +
Sbjct: 658 IEIMGADAAEFLNRVYANGFLKLPVGKARYGLMLREDGHIFDDGTTSRLGDQHFFMTTTT 717
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 718 AYAAEVMTHLEF 729
>gi|3334202|sp|P93256|GCST_MESCR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|1724108|gb|AAB38502.1| aminomethyltransferase precursor [Mesembryanthemum crystallinum]
Length = 408
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 96/305 (31%), Gaps = 54/305 (17%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + GK IPFL+ ++ D+ L S + +G + +I+K+ +D L ++
Sbjct: 90 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 149
Query: 72 SKRDSLIDKLL--FYKLRSN---VIIEIQPINGVVLSWNQEHT---------------FS 111
R+ + + ++ V I ++ F
Sbjct: 150 GCREKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSKFYFG 209
Query: 112 NSSFID--------ERFSIADVLLHRTWGHNEKIASDIK-----------------TYHE 146
+F+D R NE A D+
Sbjct: 210 QFTFLDINGFPCYLTRTGYTGEDGFEISVPNE-YAVDLAKAMLEKSEGKVRLTGRGARDS 268
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D I P +A + G +G ++G EV+ + ++R
Sbjct: 269 LRLEAGLCLYGNDLE-QHITPIEAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVG 327
Query: 206 IITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
I+ + S I + IG + KK +A+ + +H + + V
Sbjct: 328 FIS-SGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVR 386
Query: 261 GVRVK 265
G +
Sbjct: 387 GKPYE 391
>gi|255261195|ref|ZP_05340537.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62]
gi|255103530|gb|EET46204.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62]
Length = 383
Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 26/56 (46%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G A + + T +V + + ++IL GK + +I + +++++
Sbjct: 62 VHVTGPDAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHLAVNSWLV 117
>gi|301770371|ref|XP_002920589.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281338347|gb|EFB13931.1| hypothetical protein PANDA_009348 [Ailuropoda melanoleuca]
Length = 403
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 85/272 (31%), Gaps = 48/272 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G + +++++ D+ L S G IL +++ E + +
Sbjct: 88 KILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSNAG 147
Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
RD + L+ K+R S+V +E+ + L + D
Sbjct: 148 CRDKDLA-LMQDKVRELQNEGSDVSLEVVDNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149
E F ++ + R + E + + LR+
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVHLATALLENPEVKLAGLAARDSLRL 266
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
G+ +D P + + G + G V+ Q + +++R + +
Sbjct: 267 EAGLCLYGSDI-DEHTTPVEGSLSWTLGKRRRAAVDFPGASVIV-AQLKGKVQRRRVGLM 324
Query: 209 GTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL 239
+ SPIL T+ IGT+ L
Sbjct: 325 CEGAPMRAHSPILNTEGTVIGTVTSGCPSPCL 356
>gi|242279398|ref|YP_002991527.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM
2638]
gi|242122292|gb|ACS79988.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM
2638]
Length = 353
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ K+ GK A L +++ ++ TL R + +G +L +I + ED+++
Sbjct: 52 SHMGEFKLSGKGAKDGLNKLVSQNLDTLAPGKCRYGFLPNDKGGVLDDLIIYCLAEDSYM 111
Query: 67 LEI 69
L +
Sbjct: 112 LVV 114
>gi|296415481|ref|XP_002837415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633286|emb|CAZ81606.1| unnamed protein product [Tuber melanosporum]
Length = 421
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71
++ G A+PFL + +D+ LP + S L P G I+ +I+ + F + +
Sbjct: 92 RLTGPGALPFLHFVTPSDLTRLPQFQSTLSVFLHPTTGGIVDDLIITSHGPEDFYIVTNA 151
Query: 72 SKRDSLIDKLLF 83
+ +D + +
Sbjct: 152 ACKDKDLAYMAR 163
>gi|226362069|ref|YP_002779847.1| glycine cleavage system aminomethyltransferase T [Rhodococcus
opacus B4]
gi|226240554|dbj|BAH50902.1| aminomethyltransferase [Rhodococcus opacus B4]
Length = 371
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G + L + ++ + A+ S + G ++ ++ ++ + F
Sbjct: 53 LSHMGEIAVTGTESGALLDYALAGELSKIGVGRAKYSLLCNADGGVIDDLVVYRLANEHF 112
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSN---VIIEIQPINGVVLSWNQEHT 109
++ + S ++ +L R+ ++ Q +++
Sbjct: 113 LVVANASNAPAVYREL---AARAEGFSATVDDQSAETALIAVQGPAA 156
>gi|260576517|ref|ZP_05844506.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2]
gi|259021240|gb|EEW24547.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2]
Length = 975
Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T +LP R +L G +L +++ +
Sbjct: 645 CDVSTLGKIDIQGADAARFLDLVYTNTFSSLPVGRVRYGLMLREDGHVLDDGTTARLGDS 704
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 705 HFLMTTTTAAAGLVMRHLDF 724
>gi|124027706|ref|YP_001013026.1| glycine cleavage system aminomethyltransferase T [Hyperthermus
butylicus DSM 5456]
gi|123978400|gb|ABM80681.1| Aminomethyltransferase [Hyperthermus butylicus DSM 5456]
Length = 378
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 60/289 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + I V G A L ++ + + P + +A L + ++ + + +
Sbjct: 50 LSHMARIIVSGPDAGKLLDKLVPRYLESEPGTMLGPTAFLNENAGFVDDVMLYNLGGNQW 109
Query: 66 ILEIDR-------------------------------------SKRDSLIDK-------- 80
++ + K L+++
Sbjct: 110 MIVANAVNREKVLGWLNDWLSRLGFTASVEDKTLELAMFAVQGPKAAELMERLGAPREVL 169
Query: 81 -LLFYKLRSNVIIEIQPINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK 136
L + R NV + ++S W E F + + E A+ +L + +
Sbjct: 170 ELKLLRFRLNVELSEAKARAFLVSRSGWTGEDGFEIIAPVGE----AEKILRKAAEIVRE 225
Query: 137 IA---SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ + LR+ G V + P DA + + C +G + +
Sbjct: 226 LGGRLCGLGARDSLRMEMGFVLYGHEI-DEETTPVDARYWWVYQPGPKEDC-VGCKALRE 283
Query: 194 IQHRNIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALA 240
R ++ R I +P G I + +E+G + L
Sbjct: 284 ALRRGAVKVRVGIRLSKKARIVPRQGDKIYVEGVEVGHVTSGAYSPVLG 332
>gi|114765450|ref|ZP_01444560.1| sarcosine oxidase, alpha subunit family protein [Pelagibaca
bermudensis HTCC2601]
gi|114542160|gb|EAU45191.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
HTCC2601]
Length = 1012
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 42/319 (13%), Positives = 89/319 (27%), Gaps = 74/319 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TLP R + G ++ ++ ++ ED+++
Sbjct: 672 STLGKILVKGPDAGRFLDMMYTNMMSTLPVGKCRYGLMCNENGFLMDDGVVVRLSEDSWL 731
Query: 67 LEIDRSKRDSLIDKL-----------LFYKLRSNVIIEIQPINGVVLSWNQEH------- 108
D + + Y + +
Sbjct: 732 CHTTSGGADHVHAHMEDWLQCEWWDWKVY------TANLTEQYAQIAVVGPNARKLLEKL 785
Query: 109 --------TFSNSSFIDERFSIADVLLHRT--------------------WGHNEKIASD 140
++ D R + V ++R WG + ++
Sbjct: 786 GGMDVSKEAMPFMTWADGRLADTPVRVYRISFSGELSYEIAVPANRGRAFWGKLLEAGAE 845
Query: 141 I-------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
+ H +R G + + T+ P D + IS K ++G+ R
Sbjct: 846 WNITPYGTEALHVMRAEKGFIMIGDE-SDGTVIPQDLGLHW--AISKKKEDFLGKRAQQR 902
Query: 194 IQHRNIIRKRPMII-TGTDDLPPSGSPILTDDIEIGTLGVVVG-----------KKALAI 241
R + + + T + P G+ + G K +A+
Sbjct: 903 PDMARDGRWQLVGLETLDGSVLPDGAYAIAAGKNANGQRNTQGRVTSTYFSPTLNKGIAM 962
Query: 242 ARIDKVDHAIKKGMALTVH 260
++ + + ++ T
Sbjct: 963 GLVEHGPDRMGEVLSFTAE 981
>gi|71409827|ref|XP_807238.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener]
gi|70871196|gb|EAN85387.1| glycine cleavage T-protein, putative [Trypanosoma cruzi]
Length = 373
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 59/316 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP------------------- 47
S+ F +V G F + + + V L + + +
Sbjct: 54 SHVGFFEVWGADRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLA 113
Query: 48 ------QGKILLYF--LISKIEEDTFILEIDR-----------SKRDSLIDKLLFYKL-- 86
+GKI+ + +++ + D ++E+DR S +++L K
Sbjct: 114 VINAGCKGKIITHLKDRLAEFKGDATLVELDRAMVSLQGPKAASVMAPFVEELDRVKFMW 173
Query: 87 -RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYH 145
R +V ++ I S++ E F I + ++LL + + + +
Sbjct: 174 GRRSVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQ----NPDVQLAGLGARD 229
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDA-LMDLLNGISLTKGCYIGQE----VVSRIQHRNII 200
LR G+ + + + P A LM + + +G +IG E V R + +
Sbjct: 230 SLRTEAGLCLYSHEL-SEEVNPVAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKEL-VP 287
Query: 201 RKRPMIIT-GTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGM 255
R R I++ + +G PIL D+ +G + V + +AI ID+ + +
Sbjct: 288 RLRMGILSVARGPVARTGMPILVGDVVVGEVTSGVPSPTLSRNIAIGYIDRAKARAGETV 347
Query: 256 ALTVHGVRV--KASFP 269
L V G R+ + + P
Sbjct: 348 ELEVRGKRLPGEVTLP 363
>gi|167571718|ref|ZP_02364592.1| glycine cleavage system aminomethyltransferase T [Burkholderia
oklahomensis C6786]
Length = 372
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|15890760|ref|NP_356432.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
gi|15159038|gb|AAK89217.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
Length = 987
Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 18/190 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++CGK A FL + L LP AR +L G I S++EE+ F +
Sbjct: 657 IEICGKDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGMIYDDGTTSRLEENRFFMTTTT 716
Query: 72 SKRDSLIDKLLF--YKLRSNVIIEIQPINGVVLSWNQ-------------EHTFSNSSFI 116
+ +++ L F L ++ + + + + S+ +F
Sbjct: 717 AYAAGVMNHLEFCAQALWPDLDVRLASVTDQWAQMAIAGPKARDILQRIVDDDISDEAFP 776
Query: 117 DERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP---HDALMD 173
+ + G +I+ + +EL + G + D L P ++
Sbjct: 777 FLAAKEVSLFGGQLHGRLFRISFSGELAYELAVPAGYGESVADALMEAGAPEGIMPYGVE 836
Query: 174 LLNGISLTKG 183
L + + KG
Sbjct: 837 ALGVLRIEKG 846
>gi|254516183|ref|ZP_05128243.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3]
gi|219675905|gb|EED32271.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3]
Length = 370
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 46/291 (15%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82
L++++ D+ L + + +G + +I++ F L ++ S + +
Sbjct: 68 LESLVPVDLQALGEHRQSYALLTNDEGGVRDDLIITRWGAHAFFLVVNASCKAQDRTWIE 127
Query: 83 F-----YKLR---------------SNVIIEIQPINGVVLSWNQEHTFSN--------SS 114
LR +V+ + P + H + S
Sbjct: 128 SNLSAGQSLRELDGQGLLALQGPRARDVLSSLLPETAALTFLQGAHCELDGMPVYVTCSG 187
Query: 115 FIDER-------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
+ E + + H + LR+ G+ + P TI P
Sbjct: 188 YTGEDGYELSMAAEHTGIFARKLLSHEATEPVGLGARDSLRLESGLCLYGHELSP-TITP 246
Query: 168 HDALMDLLNGISLT-----KGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLPPSGSPIL 221
+A ++ S G Y G E ++R R R M + G + +
Sbjct: 247 IEAKLNWSISKSRRPDGERAGGYPGAERIARQLSEGTARVRIGMRVLGKRPVREGQEVLN 306
Query: 222 TDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
D +G + +A+A +D A+ + + V G +
Sbjct: 307 GDGEVVGVITSGAYAATVDAPIAMAFVDSAYAALDTELGVYVRGKTLPVVV 357
>gi|212704331|ref|ZP_03312459.1| hypothetical protein DESPIG_02386 [Desulfovibrio piger ATCC 29098]
gi|212672293|gb|EEB32776.1| hypothetical protein DESPIG_02386 [Desulfovibrio piger ATCC 29098]
Length = 360
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 78/256 (30%), Gaps = 51/256 (19%)
Query: 27 ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKL 86
++ ++ TL R +LT +G +L ++ + D F++ ++ + L +L
Sbjct: 71 MSHNLATLAPGRCRYGFLLTEKGTVLDDCIVYRFGPDDFMVVVNAACAAGDFATLRA-RL 129
Query: 87 RSNV----------IIEIQPINGV----VLSWNQEHTFSNSSFIDERFSIADVLLHRTWG 132
V I++Q V L F E + ++L+ RT
Sbjct: 130 PEGVALDDISEQTGKIDLQGPEAVDVLETLLGRSLRDMPYFGFRSEGWQGCELLVSRTGY 189
Query: 133 HNE-------KIASDIKTYHE-----------------LRINHGIVDPNTDFLPSTIFPH 168
E + LR+ G+ + + P
Sbjct: 190 TGELGFELYVPAGQTQALWEALLADERVKPVGLGARDTLRLEAGLPLYGHELDENHT-PA 248
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP--SGSPILTDDIE 226
+A M + + Y+G+E +R++ + ++ + +L D
Sbjct: 249 EAGM---GRMLTSTAPYVGREGAQ------EVRQKLLALSIEGRRAARNGDALLLEDGTP 299
Query: 227 IGTLGVVVGKKALAIA 242
G + +L
Sbjct: 300 AGVVTSGSFAPSLGHV 315
>gi|167582792|ref|ZP_02375666.1| glycine cleavage system T protein [Burkholderia thailandensis
TXDOH]
gi|167620912|ref|ZP_02389543.1| glycine cleavage system T protein [Burkholderia thailandensis Bt4]
Length = 372
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|167838377|ref|ZP_02465236.1| glycine cleavage system aminomethyltransferase T [Burkholderia
thailandensis MSMB43]
Length = 372
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|260427603|ref|ZP_05781582.1| sarcosine oxidase, alpha subunit [Citreicella sp. SE45]
gi|260422095|gb|EEX15346.1| sarcosine oxidase, alpha subunit [Citreicella sp. SE45]
Length = 1012
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TLP R + G ++ ++ ++ ED+++
Sbjct: 672 STLGKILVKGPDAGRFLDMMYTNMMSTLPVGKCRYGLMCNENGFLMDDGVVVRLSEDSWL 731
Query: 67 LEIDRSKRDSLIDKL 81
D + +
Sbjct: 732 CHTTSGGADHVHAHM 746
>gi|330965678|gb|EGH65938.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 360
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L QG ++ ++ D +
Sbjct: 50 SHMNVIDVLGGEAKAWLRRLLANDVDKLKTPGRALYSAMLDEQGGVIDDMIVYLT-TDGY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|123967111|ref|YP_001012192.1| glycine cleavage system aminomethyltransferase T [Prochlorococcus
marinus str. MIT 9515]
gi|166221563|sp|A2BZ74|GCST_PROM5 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|123201477|gb|ABM73085.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Prochlorococcus marinus str. MIT 9515]
Length = 370
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 94/315 (29%), Gaps = 58/315 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63
S+ I + G + ++Q ++ + + IL +G I+ +I + E D
Sbjct: 51 SHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLILNEKGGIIDDLIIYDLGRQEGD 110
Query: 64 --TFILEIDRSKRDSLIDKLL----------FYKLRSNVIIEIQPINGVVLS--WNQ--- 106
L ++ S+ + V++ IQ N L W
Sbjct: 111 ISEIFLIVNASRYQDDFLWIKNNLNTNQVSVSNAKTDKVLLSIQGRNSFTLFEEWIGSSI 170
Query: 107 -------------EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY--------- 144
+H + F FS S I +
Sbjct: 171 SHIPYFGCEYKNFDHISTEGKFF---FSKTGYTGENGLEILLPAQSAINLWDFLVSRNIQ 227
Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G+ D P++A + L + + G++ + +
Sbjct: 228 PCGLGARDTLRLEAGMHLYGQDL-DEKTTPYEAGLGWLVNLENNHE-FFGRDFLEKQSKL 285
Query: 198 NIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIARIDKVDHAIKK 253
I +K + + G + D+ IG + KA+A A I A+
Sbjct: 286 GIKKKLVGLTIEGRAIGRKGCEVFKDEKYIGIITSGTWSPTTEKAIAFAYIQNSYAALNN 345
Query: 254 GMALTVHGVRVKASF 268
+ + + G + KA+
Sbjct: 346 VVEVLIRGKKFKATI 360
>gi|289739909|gb|ADD18702.1| mitochondrial aminomethyltransferase precursor [Glossina morsitans
morsitans]
Length = 420
Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 62/283 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V GK AI +++I TAD+ + G IL +++++ + + + +
Sbjct: 97 VHGKDAIECIESICTADIHNTSNANGSLTVFTNSAGCILDDLIVTRVNDKQLYVVSNAAM 156
Query: 74 RDSLIDKLLFYKLRSN-----VIIE-IQPINGVVLSWNQEHTFSN--------------- 112
+ + + + V IE + P + +++ +
Sbjct: 157 KQQDMALMEAAVAKRKAEGKDVSIEFLSPKDQSLIALQGPSSVKALANLTKANLQQLYFM 216
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIA--------------------------SDIKTYHE 146
++ I E + D + R E + +
Sbjct: 217 TTIISEVAGVNDCRITRCGYTGEDGVEISVPSSKIKHVTESLLQQTNGNVKMAGLGARDS 276
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D +T P + + L ++ G E++ +
Sbjct: 277 LRLEAGLCLYGNDIDSNTT-PIEGALAWLVAKRRRAELNF-----PGAEIIVNQLKSGVQ 330
Query: 201 RKRPMIITGTDDLPPS---GSPILTDDIEIGTLGVVVGKKALA 240
++R + T PP G+ I +++E+G + +L
Sbjct: 331 KRRIGLKLSTAGKPPPARSGAHIYHNNVEVGYVTSGCPSPSLG 373
>gi|167564570|ref|ZP_02357486.1| glycine cleavage system aminomethyltransferase T [Burkholderia
oklahomensis EO147]
Length = 372
Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|163743195|ref|ZP_02150577.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter
gallaeciensis 2.10]
gi|161383612|gb|EDQ07999.1| sarcosine oxidase, alpha subunit family protein [Phaeobacter
gallaeciensis 2.10]
Length = 1010
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S + V G A FL + T + TL R + + G ++ ++++I++DT++
Sbjct: 672 STLGKLVVKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCSENGFLIDDGVVARIDDDTWL 731
Query: 67 LEIDRSKRDSLIDKL 81
+ + +
Sbjct: 732 CHTTTGGAERIHGHM 746
>gi|83719545|ref|YP_443749.1| glycine cleavage system T protein [Burkholderia thailandensis E264]
gi|83653370|gb|ABC37433.1| glycine cleavage system T protein [Burkholderia thailandensis E264]
Length = 584
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 264 SHMCVVDFTGPRVRAFFEHALANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 323
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 324 RVVVNAGTAD 333
>gi|21311901|ref|NP_083048.1| dimethylglycine dehydrogenase, mitochondrial precursor [Mus
musculus]
gi|48428488|sp|Q9DBT9|M2GD_MOUSE RecName: Full=Dimethylglycine dehydrogenase, mitochondrial;
AltName: Full=ME2GLYDH; Flags: Precursor
gi|12836171|dbj|BAB23536.1| unnamed protein product [Mus musculus]
gi|151357477|emb|CAO77970.1| dimethylglycine dehydrogenase precursor [Mus musculus]
Length = 869
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 58/317 (18%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ + L + + + S +LTP+G++ +S+
Sbjct: 525 IDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRGRVYAELTVSQQSPG 582
Query: 64 TFILEIDRSKRDSLIDKLLFYKLR--SNVIIE-IQPINGVVLSWNQEH----------TF 110
F+L + + R +V I+ I GV+
Sbjct: 583 EFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDL 642
Query: 111 SNSSF---------------IDERFSIADVLLHRTWGHNEKIAS---------------D 140
S+ +F R S L + E A+ D
Sbjct: 643 SDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGD 702
Query: 141 IKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
TY + LR+ ++ T P +A ++ + L K +IG++ + +I+
Sbjct: 703 FGTYALNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQALKQIKTE 759
Query: 198 NIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLG------VVVGKKALAIARIDKVDHA 250
+ R+ + TDD+ P G+ I +G + A A + +
Sbjct: 760 GLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVG 819
Query: 251 IKKGMALTVHGVRVKAS 267
+ + L
Sbjct: 820 QQVEVELLGKNYPATII 836
>gi|288933610|ref|YP_003437669.1| glycine cleavage system protein T [Klebsiella variicola At-22]
gi|288888339|gb|ADC56657.1| glycine cleavage system T protein [Klebsiella variicola At-22]
Length = 364
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 64/316 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERF 120
L ++ + R+ + + Y L I ++ ++ Q + + F D +
Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGL----EITVRDDLSLIAVQGPQAKAKAATLFTDAQR 165
Query: 121 SIADVL-----------------------------------LHRTWGHNEKIASDIKTYH 145
+ + R +
Sbjct: 166 QAVEGMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARD 225
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI------ 199
LR+ G+ + P A M +IG+E + + +
Sbjct: 226 TLRLEAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQMVGL 284
Query: 200 ------IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
+ + + + TD I+T TLG ++A+AR+
Sbjct: 285 VMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTA 338
Query: 254 GMALTVHGVRVKASFP 269
+ + + VK + P
Sbjct: 339 VVQIRNREMPVKVTKP 354
>gi|156101487|ref|XP_001616437.1| aminomethyltransferase, mitochondrial precursor [Plasmodium vivax
SaI-1]
gi|148805311|gb|EDL46710.1| aminomethyltransferase, mitochondrial precursor, putative
[Plasmodium vivax]
Length = 400
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 90/304 (29%), Gaps = 75/304 (24%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE 68
+ +K+ G FL+ + +D+ L R S +L +G I+ +I + E+ +L
Sbjct: 79 RPILKISGADKTHFLEKYVGSDIKGLWENECRISLLLNEKGGIVDDIVII-LRENHLLLY 137
Query: 69 IDRSKRDSLIDKL--------LFYKLRSNVIIEIQPINGVVLSW------------NQEH 108
++ +D + L +V IE + + +
Sbjct: 138 LNIQCKDKVFSYLNEKLLENTKM-----DVKIEEYTSHRSICIQGSKSANVLNEIIGDDT 192
Query: 109 TFSNSSFIDE--------------RFSIADVLLHRTWGHNEKIAS--------------D 140
N SF+ R++ N+ +
Sbjct: 193 YLENCSFMSSNVTKLNKIEGCVLNRYTCTGEDGFDILVPNKHVGELYQCILNNSLVKPGG 252
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG------ISLTKGCYIGQEVVSRI 194
++ + LR+ G D + P ++ + G + G V+
Sbjct: 253 LEVLNTLRLESGFCVYGKDI-NEKLTPIESNYKWVLGQRRLKELDFN-----GAHVIINQ 306
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDD---IEIGTLGVVV------GKKALAIARID 245
KR +I + +P S I T++ EIG + V A+ + +
Sbjct: 307 IKNGTTIKRVGLIMDSTIVPKENSKIYTNENAHEEIGYITSSVFSPLLQKPIAMGYIKTE 366
Query: 246 KVDH 249
Sbjct: 367 HAAA 370
>gi|126135056|ref|XP_001384052.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054]
gi|126091250|gb|ABN66023.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054]
Length = 393
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
G A LQ I D+ LP + S +L G ++ +I+K E+ + + + R
Sbjct: 74 SGVDAKNLLQKITPIDLSQLPVNSSSLSVLLNENGGVIDDCIITKHGEEKYYMVTNAGCR 133
Query: 75 DSLIDKLLF 83
I +
Sbjct: 134 AKDISFIKK 142
>gi|221214248|ref|ZP_03587220.1| glycine cleavage system T protein [Burkholderia multivorans CGD1]
gi|221165903|gb|EED98377.1| glycine cleavage system T protein [Burkholderia multivorans CGD1]
Length = 372
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G A F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRARAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|254461091|ref|ZP_05074507.1| aminomethyl transferase family protein [Rhodobacterales bacterium
HTCC2083]
gi|206677680|gb|EDZ42167.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 381
Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 26/56 (46%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G A + + T +V + + ++IL GK + +I + +++++
Sbjct: 62 VHVTGPDAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHLAVNSWLV 117
>gi|221202132|ref|ZP_03575167.1| glycine cleavage system T protein [Burkholderia multivorans CGD2M]
gi|221209060|ref|ZP_03582055.1| glycine cleavage system T protein [Burkholderia multivorans CGD2]
gi|221171055|gb|EEE03507.1| glycine cleavage system T protein [Burkholderia multivorans CGD2]
gi|221177926|gb|EEE10338.1| glycine cleavage system T protein [Burkholderia multivorans CGD2M]
Length = 372
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G A F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRARAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|291415243|ref|XP_002723863.1| PREDICTED: dimethylglycine dehydrogenase [Oryctolagus cuniculus]
Length = 832
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 85/281 (30%), Gaps = 58/281 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS + G+ ++ L + V + S +LTP+G++ +S
Sbjct: 498 IDLSPFGKFHIKGRDSVTLLDNLFANVVPKV--GFTNISHMLTPRGRVYAELTVSHQAPG 555
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---PINGVVLSWNQ----------EHTF 110
F+L + + +R +EI GV+
Sbjct: 556 DFLLVTGSGSELHDLRWIEEAAIRGGYEVEISNTTDELGVLGVAGPRARQVLQKLTSEDL 615
Query: 111 SNSSF----IDE-----------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
S+ +F + R S L + E Y L +N G +
Sbjct: 616 SDGAFKFLQVKPLKVAHVPVTAIRISYTGELGWELYHRRED---SPALYEAL-MNAGQEE 671
Query: 156 PNTDFLPS--------------------TIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194
DF P +A ++ + L K +IG+ + +I
Sbjct: 672 GIADFGTYALNVLRLEKAFRAWGAEMNCDTNPLEAGLEPF--VKLDKPADFIGKHALRQI 729
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVV 234
+ + R+ + TDD+ P G+ + + +G
Sbjct: 730 KASGLKRRLVCLTLATDDVDPEGNESVWYEGKVVGNTTSGA 770
>gi|262042551|ref|ZP_06015708.1| aminomethyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011904|ref|ZP_08307188.1| aminomethyltransferase [Klebsiella sp. MS 92-3]
gi|259040111|gb|EEW41225.1| aminomethyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534051|gb|EGF60699.1| aminomethyltransferase [Klebsiella sp. MS 92-3]
Length = 375
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 61 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 120
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + I ++ ++ Q + + F D + +
Sbjct: 121 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 180
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 181 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 240
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199
G+ + P A M +IG+E + + +
Sbjct: 241 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 299
Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 300 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 353
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 354 RNREMPVKVTKP 365
>gi|156848479|ref|XP_001647121.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156117805|gb|EDO19263.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 31/70 (44%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A+ FL + + L S +L G I+ +I+KI ++ F + +
Sbjct: 71 RLSGKEAMDFLHRVTPTEYKGLQSNNGTLSVLLNSTGGIVDDTMITKINDEEFYIVTNAG 130
Query: 73 KRDSLIDKLL 82
+ ++ +
Sbjct: 131 CVERDLEFIK 140
>gi|152971859|ref|YP_001336968.1| glycine cleavage system aminomethyltransferase T [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|166221555|sp|A6TDR7|GCST_KLEP7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|150956708|gb|ABR78738.1| aminomethyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 364
Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + I ++ ++ Q + + F D + +
Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIVMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199
G+ + P A M +IG+E + + +
Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288
Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 343 RNREMPVKVTKP 354
>gi|206579883|ref|YP_002236632.1| glycine cleavage system T protein [Klebsiella pneumoniae 342]
gi|206568941|gb|ACI10717.1| glycine cleavage system T protein [Klebsiella pneumoniae 342]
Length = 375
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 61 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 120
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + I ++ ++ Q + + F D + +
Sbjct: 121 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 180
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 181 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 240
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199
G+ + P A M +IG+E + + +
Sbjct: 241 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 299
Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 300 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 353
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 354 RNREMPVKVTKP 365
>gi|330965472|gb|EGH65732.1| sarcosine oxidase, subunit alpha [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 1006
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 731 MTTTTGGAARVLQWLEIY 748
>gi|238896450|ref|YP_002921188.1| glycine cleavage system aminomethyltransferase T [Klebsiella
pneumoniae NTUH-K2044]
gi|238548770|dbj|BAH65121.1| aminomethyltransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 364
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + I ++ ++ Q + + F D + +
Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 170 GMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199
G+ + P A M +IG+E + + +
Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288
Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 343 RNREMPVKVTKP 354
>gi|257481789|ref|ZP_05635830.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 360
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMNVIDVVGRQARTWLRHLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|326388296|ref|ZP_08209899.1| hypothetical protein Y88_0328 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207462|gb|EGD58276.1| hypothetical protein Y88_0328 [Novosphingobium nitrogenifigens DSM
19370]
Length = 819
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 96/308 (31%), Gaps = 55/308 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----I 69
+ G A +L ++++ V S +LT +G + F + K T+ L +
Sbjct: 504 ITGPGAEDWLNSLLSNTVPK-KVGKVALSYLLTDEGGVRAEFTVYKKAPQTYYLVSAGAL 562
Query: 70 DRSKRDSLIDKL------LFYKLR-----------------SNVIIEIQPINGVVLSWNQ 106
+R +D L+ L F +L + V Q
Sbjct: 563 ERHDQDYLLKALPNDGSVRFERLTTAMGVLVLAGPKARDVLAKVTRTDLSNEAFPWLTGQ 622
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNE------------KIASDIKTYHELRINHGIV 154
+ + R + L E DIK + + +
Sbjct: 623 SISIGGAKVDALRVNFIGELGWEFHHPIEMQNYIFDKLMEAGAEFDIKPFGIRAMTSMAL 682
Query: 155 DPNTDFLPSTIFP----HDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRKRPMIITG 209
+ + +P + ++ +D IS K + G+E +++R + + + + G
Sbjct: 683 EKSYKLIPRELSIEYAALESGLDRF--ISFKKPAFKGREGLLARKEAGLKWKLVTLEVFG 740
Query: 210 TDDLPPSGS-PILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGV 262
D GS PI D + +G V ALA+ + + +++ G
Sbjct: 741 VTDADARGSEPIYRDGVLVGRATSGGYGWRVGKSLALAMVAPEHGALGTELEISILGKGH 800
Query: 263 RVKASFPH 270
+ P
Sbjct: 801 KA-VVIPD 807
>gi|290511324|ref|ZP_06550693.1| glycine cleavage system T protein [Klebsiella sp. 1_1_55]
gi|289776317|gb|EFD84316.1| glycine cleavage system T protein [Klebsiella sp. 1_1_55]
Length = 364
Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 56/312 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G FL+ ++ DV L A + +LT ++ ++ + ED F
Sbjct: 50 SHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYF 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN-QEHTFSNSSFIDERFSIAD 124
L ++ + R+ + + + I ++ ++ Q + + F D + +
Sbjct: 110 RLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVE 169
Query: 125 VL-----------------------------------LHRTWGHNEKIASDIKTYHELRI 149
+ R + LR+
Sbjct: 170 GMKPFFGVQSGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI---------- 199
G+ + P A M +IG+E + + +
Sbjct: 230 EAGMNLYGQEMDEGVS-PLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTE 288
Query: 200 --IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMAL 257
+ + + + TD I+T TLG ++A+AR+ + +
Sbjct: 289 KGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLG-----YSIALARV-PAGIGDTAVVQI 342
Query: 258 TVHGVRVKASFP 269
+ VK + P
Sbjct: 343 RNREMPVKVTKP 354
>gi|120597561|ref|YP_962135.1| glycine cleavage system aminomethyltransferase T [Shewanella sp.
W3-18-1]
gi|146294298|ref|YP_001184722.1| glycine cleavage system aminomethyltransferase T [Shewanella
putrefaciens CN-32]
gi|166221570|sp|A4YAE0|GCST_SHEPC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221572|sp|A1RFY6|GCST_SHESW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|120557654|gb|ABM23581.1| glycine cleavage system T protein [Shewanella sp. W3-18-1]
gi|145565988|gb|ABP76923.1| glycine cleavage system T protein [Shewanella putrefaciens CN-32]
Length = 364
Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A FL+ ++ DV L A S +L I+ + + + +
Sbjct: 50 SHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFY 109
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ ++ + R+ + + ++ + +P ++ ++
Sbjct: 110 RVVVNSATREKDLAWIAKQSQGFDITVTERPELAMIAVQGPNAKAKAAAV 159
>gi|331009423|gb|EGH89479.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 360
Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMNVIDVVGRQARTWLRHLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|118378042|ref|XP_001022197.1| glycine cleavage system T protein [Tetrahymena thermophila]
gi|89303964|gb|EAS01952.1| glycine cleavage system T protein [Tetrahymena thermophila SB210]
Length = 1724
Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 48/278 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ +K+ GK ++ F++ +I D+ P S IL I+ +++K
Sbjct: 66 SLFDVSHMGQVKIRGKDSVDFIEKLIVGDIRGKPVAEGFLSLILNKNAGIIDDTIVTKF- 124
Query: 62 EDTFILEIDRSKRDSLIDKLLFYK--LR--SNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+D + ++ + + ++ + K S+V IE ++ + + D
Sbjct: 125 DDHIHMVVNGANKYIDLEHMKKLKEEFFANSDVSIEYLDTRQLIAIQGPKAAQVLQNLTD 184
Query: 118 ERFSI--------------------------------------ADVLLHRTWGHNEKIAS 139
S A L + +
Sbjct: 185 TDLSKIKFMHHVDLTLKGGMKVNACRCGYTGEDGFEISVSEQEAVQLAELLLANPLLKPA 244
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT----KGCYIGQEVVSRIQ 195
+ LR+ G+ D P L+ + K ++G EV+++ +
Sbjct: 245 GLGARDSLRVEAGLCLHGQDMSPQISPAEATLLWTVRKTKDNPFPEKQKFLGSEVLAKQR 304
Query: 196 HRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ +KR + + G +L + ++G +
Sbjct: 305 KEGVSQKRVGFAVKNNGIIRQGCDVLDEQGNKVGHVSS 342
>gi|70733011|ref|YP_262784.1| sarcosine oxidase subunit alpha [Pseudomonas fluorescens Pf-5]
gi|68347310|gb|AAY94916.1| sarcosine oxidase, alpha subunit [Pseudomonas fluorescens Pf-5]
Length = 1005
Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 731 MTTTTGGAARVLQWLEIY 748
>gi|312963485|ref|ZP_07777967.1| sarcosine oxidase, subunit alpha [Pseudomonas fluorescens WH6]
gi|311282291|gb|EFQ60890.1| sarcosine oxidase, subunit alpha [Pseudomonas fluorescens WH6]
Length = 1005
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 731 MTTTTGGAARVLQWLEIY 748
>gi|90419837|ref|ZP_01227746.1| glycine cleavage system T protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335878|gb|EAS49626.1| glycine cleavage system T protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 380
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 82/264 (31%), Gaps = 55/264 (20%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ DV L R + G IL +I+ D L ++ + +D
Sbjct: 71 ADAALALETLVPVDVAGLKEGRQRYAVFTNADGGILDDLMIANRG-DHLFLVVNAACKDQ 129
Query: 77 LIDKLLFYKLRSNVII--EIQPI-NGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW-- 131
I L R+ + E++P+ + +L+ + + ++ + + R
Sbjct: 130 DIAHL-----RAGLEDTCEVEPLTDRALLALQGPAAEAALATLNPAVAEMRFMDLRALDL 184
Query: 132 ----------------GHNEKIASDIK-------------------TYHELRINHGIVDP 156
G+ I +D LR+ G+
Sbjct: 185 VGAACIVSRSGYTGEDGYEISIPADAAEKLAKALLALETVEPIGLGARDSLRLEAGLCLY 244
Query: 157 NTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D + +T P + ++ +G + G +++ + R+R ++
Sbjct: 245 GND-VDTTTTPVEGALEWSMQKVRKAGGDREGGFPGADIILKQLAEGATRRRVGLLPEGR 303
Query: 212 DLPPSGSPILT---DDIEIGTLGV 232
G+ + +GT+
Sbjct: 304 APVRGGTSLFAEAEGGAPVGTVTS 327
>gi|330816065|ref|YP_004359770.1| FAD dependent oxidoreductase [Burkholderia gladioli BSR3]
gi|327368458|gb|AEA59814.1| FAD dependent oxidoreductase [Burkholderia gladioli BSR3]
Length = 825
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G+ A LQ++ AD+ + +AIL +G I+++ +D F+L
Sbjct: 505 LLVKGRDAERALQSLAAADLT-VAPGTVLRAAILNARGGYESDPDIARLADDQFLLVTGV 563
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
++ +D L + ++ ++GV + ++ FS+
Sbjct: 564 AQVTRDLDLLERH-------LDATGLHGVAVDVTGQYAL---------FSLLGPRSRALL 607
Query: 132 GHNEKIASDIKTY 144
K A D +
Sbjct: 608 QSVSKAALDAAAF 620
>gi|307944642|ref|ZP_07659982.1| dimethylglycine dehydrogenase [Roseibium sp. TrichSKD4]
gi|307772391|gb|EFO31612.1| dimethylglycine dehydrogenase [Roseibium sp. TrichSKD4]
Length = 811
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++ G A FL ++T + + + +L P+GK++ F I+++ E+ F +
Sbjct: 495 EITGPGAEAFLDLLMTNTMPKV--GRIILTPMLNPEGKLIGDFTIARVSEEHFYM 547
>gi|92113128|ref|YP_573056.1| sarcosine oxidase alpha subunit family protein [Chromohalobacter
salexigens DSM 3043]
gi|91796218|gb|ABE58357.1| sarcosine oxidase, alpha subunit family [Chromohalobacter
salexigens DSM 3043]
Length = 1019
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 84/270 (31%), Gaps = 55/270 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L R + G ++ S + E+ F+
Sbjct: 685 STLGKIDIQGPDAREFLGRIYTNKWQKLAPGRVRYGLMCGDDGMVMDDGTTSCLAENHFL 744
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ +++ L + KL +++ I++
Sbjct: 745 MTTTTGNAAPVLEWLELWHQTEWPELEVYFNSVTDHWATMTVTGPEARKLLTDLTDIDLD 804
Query: 96 PINGVVLSWNQEHTFSNSSFIDERFSIADVL--------------LHRTWGHNEK---IA 138
+ W + H + + R S L + H +K
Sbjct: 805 REAFKFMDWREGHVAGVPARVF-RISFTGELAFEINVQAHYAMHVWEALFAHGDKYNLTP 863
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHR 197
+T H LR G + D ++ P D M I K ++G+ ++R R
Sbjct: 864 YGTETMHVLRAEKGFIIVGQD-TDGSVTPEDLGMHW--AIGYDKPFPWVGKRALTRSDTR 920
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDI 225
RK+ + + D + G+P++ D
Sbjct: 921 REGRKQLVGLKPKDASVVLEEGAPVVFDPK 950
>gi|295699473|ref|YP_003607366.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1002]
gi|295438686|gb|ADG17855.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1002]
Length = 1000
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 84/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ E ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWTKLEVGKCRYGLMLDENGMIFDDGVTVRLAEQHYM 725
Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEI-QPING 99
+ ++ L + ++R V+ ++ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDLRVRLASVTDHWATFAVVGPQSRKVLRKVCDDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ +E T + ++ R S + L W + DI
Sbjct: 786 ANAAFPFMTYREGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ PHD M G+ ++G+ +SR
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGM---GGLVAKSKDFLGKRSLSRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLSEDASFVIPEGSQIVAG 928
>gi|302539725|ref|ZP_07292067.1| sarcosine oxidase, alpha subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302457343|gb|EFL20436.1| sarcosine oxidase, alpha subunit [Streptomyces himastatinicus ATCC
53653]
Length = 964
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 86/290 (29%), Gaps = 65/290 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A FL I T L +AR + P G I + ++EE+ + +
Sbjct: 632 IEVWGTDAGEFLGRIYTNGFKKLKPGMARYGVMCKPDGMIFDDGVTLRLEENRYFMTTTT 691
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQ----------------PINGVVLSWNQEHTFSNSSF 115
++D L + +++ VV + S +F
Sbjct: 692 GGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWTTIAVVGPQSREVVAGLAPDVDLSAEAF 751
Query: 116 -------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE---------------- 146
+ R + N + + E
Sbjct: 752 PFMAFRETTLASGVPARICRISFSGELAYEVNVPAWYGLAVWEEVYAIGRPYDITPYGTE 811
Query: 147 ----LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR G + D T+ P DA M +S KG ++G+ SR RK
Sbjct: 812 TMHVLRAEKGYIIVGQD-TDGTVTPQDAGMSW--AVSKVKG-FVGKRSYSRPDTSRTDRK 867
Query: 203 RPMIITGTDDL--PPSGSPILTDDIE----------IGTLGVVVGKKALA 240
+ + + +D P G+ ++ D+ +G + AL
Sbjct: 868 QLVGLLPSDGTTRLPEGAQLVAPDVPLTPETGPVPMLGHVTSSYHSPALG 917
>gi|91216429|ref|ZP_01253396.1| glycine cleavage system aminomethyltransferase T [Psychroflexus
torquis ATCC 700755]
gi|91185567|gb|EAS71943.1| glycine cleavage system aminomethyltransferase T [Psychroflexus
torquis ATCC 700755]
Length = 360
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 93/315 (29%), Gaps = 52/315 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ +Q I + D L A+ + + G I+ +I K + F+
Sbjct: 49 SHMGEFFIEGKEALQLIQKITSNDASILIDGQAQYTCMPNETGGIIDDLIIYKFHNEKFM 108
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------------ 114
+ ++ S + + + + + ++ + + S
Sbjct: 109 MVVNASNIEKDWKWVNQHNTFDAIPTNLSDEYSLLAIQGPKALEAMQSISPLDLSAIKFY 168
Query: 115 --FIDERFSIADVLLHRT--------------------WGHNEKIASD-------IKTYH 145
+ E DV++ T W D +
Sbjct: 169 HFAVGEFAGAQDVIISATGYTGSGGFEIYFKNKDAELIWTSVFAAGKDFGIKPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G+ D T P +A + + TK +I E + + RK
Sbjct: 229 TLRLEMGMCLYGNDI-DDTTSPIEAKLGWI--TKFTKD-FINAEALKAEKENGPCRKLVA 284
Query: 206 IITGTDDLPPSGSPILTDDI-EIGTLGVVV------GKKALAIARIDKVDHAIKKGMALT 258
+P G I+ ++ +IG + + + + + +
Sbjct: 285 FELQEKGIPRHGYAIVDEEGHDIGHVTSGTMSPSLKKAIGMGYVKTEHSKFGTSICIQIR 344
Query: 259 VHGVRVKASFPHWYK 273
++ P +YK
Sbjct: 345 KKTIKATIVKPPFYK 359
>gi|13475212|ref|NP_106776.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
gi|14025963|dbj|BAB52562.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
Length = 988
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+VCGK A FL + + L LP AR +L G I S++ +D F +
Sbjct: 658 IEVCGKDAAEFLNRVYSNVFLKLPVGKARYGLMLREDGFIYDDGTTSRLADDRFFMTTTT 717
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 718 AYAAGVMTHLEF 729
>gi|293603717|ref|ZP_06686136.1| sarcosine oxidase [Achromobacter piechaudii ATCC 43553]
gi|292817891|gb|EFF76953.1| sarcosine oxidase [Achromobacter piechaudii ATCC 43553]
Length = 1003
Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 81/270 (30%), Gaps = 58/270 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G + + ++ E ++
Sbjct: 665 STLGKIDIQGPDAATLLNWVYTNAWSKLEVGKGRYGLMLDENGMVFDDGVTMRLGEQHYL 724
Query: 67 LEIDRSKRDSLI----------------------DKLLFYK----LRSNVIIEIQP-ING 99
+ ++ D + L V+ + P I+
Sbjct: 725 MSTTTGGAARVLAWMERWLQTEWPHLDVHLTTVTDHFATFAVAGPLARKVLRTVCPDIDF 784
Query: 100 VVLSWN----QEHTFSNSSFIDE----RFSIADV----------LLHRTWGHNEKIAS-- 139
++ +E T + S + R S + L R W
Sbjct: 785 SNHAFPFMSFREGTIAGSGWSSPTRIMRISFSGELSYEVNVPANLGQRVWNALMAAGQQY 844
Query: 140 -----DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+T H LR G + D ++ P D M ++ +K C +G+ +SR
Sbjct: 845 GITPYGTETMHVLRAEKGYIIVGQD-TDGSMTPQDLGMG--GMVTKSKDC-LGKRSLSRA 900
Query: 195 QHRNIIRKRPMIITGTDDLP--PSGSPILT 222
RK+ + + D P GS I+
Sbjct: 901 HTAGPNRKQFVGLLARDPAVVLPEGSQIMH 930
>gi|330825112|ref|YP_004388415.1| glycine cleavage system T protein [Alicycliphilus denitrificans
K601]
gi|329310484|gb|AEB84899.1| glycine cleavage system T protein [Alicycliphilus denitrificans
K601]
Length = 387
Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 36/76 (47%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G +A L++++ DV+ LP R +L +G ++ + +DT
Sbjct: 67 SHMGQLKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGVIDDLMFFNQGDDTLF 126
Query: 67 LEIDRSKRDSLIDKLL 82
L ++ + + I +
Sbjct: 127 LIVNGACKAGDIAHIQ 142
>gi|315101059|gb|EFT73035.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA1]
Length = 371
Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 43/106 (40%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
++ + + ++ + + R +V + + +++ +
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVT 156
>gi|258652090|ref|YP_003201246.1| glycine cleavage system aminomethyltransferase T [Nakamurella
multipartita DSM 44233]
gi|258555315|gb|ACV78257.1| glycine cleavage system T protein [Nakamurella multipartita DSM
44233]
Length = 368
Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A F+ ++ D+ + A+ + T G +L + + D
Sbjct: 55 SHLGKATVTGPGAAAFVNDCLSNDLNRIGPGQAQYTLCCTGDGGVLDDLIAYLVSPDEVF 114
Query: 67 L 67
L
Sbjct: 115 L 115
>gi|255038295|ref|YP_003088916.1| glycine cleavage system aminomethyltransferase T [Dyadobacter
fermentans DSM 18053]
gi|254951051|gb|ACT95751.1| glycine cleavage system T protein [Dyadobacter fermentans DSM
18053]
Length = 360
Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ V G A+ +Q + D L + S + G ++ L+ +I ED +
Sbjct: 49 SHMGEFSVKGPGALALIQKVSANDASALYDGKVQYSYLPNATGGVVDDLLVYRIAEDDYF 108
Query: 67 LEIDRSKRD 75
L ++ S +
Sbjct: 109 LVVNASNIE 117
>gi|313813221|gb|EFS50935.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA1]
Length = 371
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 43/106 (40%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
++ + + ++ + + R +V + + +++ +
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVT 156
>gi|126733834|ref|ZP_01749581.1| FAD dependent oxidoreductase [Roseobacter sp. CCS2]
gi|126716700|gb|EBA13564.1| FAD dependent oxidoreductase [Roseobacter sp. CCS2]
Length = 817
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 55/317 (17%), Positives = 96/317 (30%), Gaps = 60/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S + G+ A FL+ +I + + + QG+IL + + ++D F
Sbjct: 501 LPGFSRFNLEGEGAAEFLRGMIAGALPKI--GRMNLAYFPDSQGRILTEMSLIRHDDDHF 558
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEI----------------------QPINGVVLS 103
L S + D L Y L + + + + L
Sbjct: 559 TLITAASAQWHDYDILDKY-LPAGLTLTDITRDFSTLIVTGPKARDLFTAMGTDADLSLG 617
Query: 104 W--NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELR 148
W +Q T + R A L +KI + + LR
Sbjct: 618 WLTHQSATVAGQPCKLARVIFAGELGWEIHARMDKIPALYDAVLAAGATPFGMFALNALR 677
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
I G D + M+ I K + G+ + + R R ++
Sbjct: 678 IEKGYRAWKGDLSTDYTL-LEGGMERF--IKFDKPQDFPGKAALLGEKQRGRSR-GFAML 733
Query: 208 TGTDDLPPSG---SPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALT 258
T P SPI D ++G V AL + R D + + + +
Sbjct: 734 TIDTPGPADAPYMSPIWVGDEKVGETTSGDWGFRVNKSIALGMLRTD--VNTLGSKVEVE 791
Query: 259 VHG----VRVKASFPHW 271
++G V+ + P W
Sbjct: 792 IYGERYVATVQENQPLW 808
>gi|308448078|ref|XP_003087608.1| hypothetical protein CRE_11637 [Caenorhabditis remanei]
gi|308254356|gb|EFO98308.1| hypothetical protein CRE_11637 [Caenorhabditis remanei]
Length = 407
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A FL ++ + T+ A+ S +L +G ++ ++ + E TF++ +
Sbjct: 80 IEGPDAGAFLDGVLAGLISTMRVGKAKYSLLLNERGGVVDDLIVYRTAEHTFLIIANAGN 139
Query: 74 RD 75
RD
Sbjct: 140 RD 141
>gi|116327162|ref|YP_796882.1| glycine cleavage system aminomethyltransferase T [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|122284992|sp|Q055P6|GCST_LEPBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|116119906|gb|ABJ77949.1| Aminomethyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 371
Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 7 SNQSFIKVCGKS--AIPFLQAIITAD-VLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I + G+ + FL+ ++T + V +L + +AIL G ++ I K +
Sbjct: 52 SHMGEIFITGEPKIVLDFLE-LVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSAE 110
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+++ + S +++ LL Y S V + Q N ++
Sbjct: 111 KYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWHQIALQGPKA 156
>gi|319763032|ref|YP_004126969.1| glycine cleavage system t protein [Alicycliphilus denitrificans BC]
gi|317117593|gb|ADV00082.1| glycine cleavage system T protein [Alicycliphilus denitrificans BC]
Length = 377
Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G +A L++++ DV+ LP R +L +G I+ + +DT
Sbjct: 57 SHMGQLKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGIIDDLMFFNQGDDTLF 116
Query: 67 LEIDRSKRDSLIDKLL 82
L ++ + + I +
Sbjct: 117 LIVNGACKAGDIAHIQ 132
>gi|170724039|ref|YP_001751727.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida
W619]
gi|169762042|gb|ACA75358.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida W619]
Length = 1005
Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 86/292 (29%), Gaps = 60/292 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I + L AR + G + + + + ++ F
Sbjct: 670 STLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFY 729
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI--IEI 94
+ ++ L Y KL S + I++
Sbjct: 730 MTTTTGGAARVLQWLELYHQTEWPEMKVYFTSVTDHWATLTLSGPNSRKLLSELTDDIDL 789
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVLLH-------RTWGHNEKIASDIKTY--- 144
++W +E T R S L + G EK+ K Y
Sbjct: 790 DKDAFPFMTW-KEGTVGGVPARVFRISFTGELSYEVNVQANYAMGVLEKVIEAGKKYNLT 848
Query: 145 -------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
H LR G + D ++ P D M G + +IG ++R
Sbjct: 849 PYGTETMHVLRAEKGFIIVGQD-TDGSMTPDDLNMSWCVGRN-KPFSWIGLRGMNREDCV 906
Query: 198 NIIRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKKALAI 241
RK+ + + D P G+ ++ D + +G + +L
Sbjct: 907 RENRKQLVGLKPVDPTKWLPEGAQLVFDPKQPIPMDMVGHVTSSYAANSLGY 958
>gi|289640859|ref|ZP_06473030.1| glycine cleavage system T protein [Frankia symbiont of Datisca
glomerata]
gi|289509435|gb|EFD30363.1| glycine cleavage system T protein [Frankia symbiont of Datisca
glomerata]
Length = 444
Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTF 65
S+ +V G A + + +T D+ + A+ + P G ++ +
Sbjct: 97 SHLGKARVRGPGAADLVDSALTNDLSRIGPGQAQYTLCCDPETGGVVDDLIAYLYSASEV 156
Query: 66 ILEIDRSKRDSLIDKL 81
L + + ++ +L
Sbjct: 157 FLIPNAANTAEVVRRL 172
>gi|314918530|gb|EFS82361.1| glycine cleavage system T protein [Propionibacterium acnes
HL050PA1]
Length = 371
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 95/317 (29%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I++ G + L + + + A+ S +LT +G ++ + S + + +
Sbjct: 51 LSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTSHLPDGDY 110
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT---------------- 109
++ + + ++ + + R +V + + +++
Sbjct: 111 LVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPKAVTIVLAALQKANTTLD 170
Query: 110 ----------------FSNSSFIDERFSIADVLLHRTWGHNEK----------------I 137
+ R + + E
Sbjct: 171 SDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAEAAEHLWQLLMDAGGEDLT 230
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQH 196
+ LR+ G+ + I P A + + ++ K G ++G+ +
Sbjct: 231 PCGLACRDTLRLEAGMPLYGHELGTD-IHPSQAGLGRV--VNFKKEGDFVGR--CALENR 285
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAI 251
+ + + G +G ++ + +G + + +A+A +D
Sbjct: 286 DTTTDRMLVGLAGEGRRAGRAGYAVVNEGKTVGAITSGILSPTLGHPIAMAFVDPDVAKT 345
Query: 252 KKGMALTVHGVRVKASF 268
+++ V G + +
Sbjct: 346 GTSLSVDVRGKALNTTV 362
>gi|149236221|ref|XP_001523988.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452364|gb|EDK46620.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces
elongisporus NRRL YB-4239]
Length = 397
Score = 43.7 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G + FLQ + D+ L + S +L G ++ +I+K E+ + + +
Sbjct: 76 ISGSESKLFLQKVTPIDLDLLAINSSSLSVLLNKDGGVIDDCIITKHGENAYYMVTNAGC 135
Query: 74 RDSLIDKLLF 83
R +D L
Sbjct: 136 RAKDVDFLKK 145
>gi|90417509|ref|ZP_01225431.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2207]
gi|90330662|gb|EAS45946.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2207]
Length = 373
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 105/310 (33%), Gaps = 51/310 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I + G+ A L+ ++ D+ +L + + QG ++ ++++ E+TF
Sbjct: 56 SHMGQIIIEGEGAAQALEKLMPVDLESLGINQQTYATLTNEQGGVMDDLIVTRWAENTFF 115
Query: 67 LEIDRSKR----DSLIDKLLFYKLR---------------SNVIIEIQPINGVVLSWNQE 107
L ++ + + + L + +R ++ E+ P ++ N
Sbjct: 116 LIVNAGCKMQDLEHIRSHLPDFDIRYLGEQGLLALQGLHAREIMAELSPEANKLVFMNGC 175
Query: 108 HT--------FSNSSFIDER-FSIADVLLHRTWGHNEKIASDIKTY------HELRINHG 152
H+ + S + E F I+ ++ ++ ++ + LR+ G
Sbjct: 176 HSTIDGIDCYITRSGYTGEDGFEISVDPSDALRLADKLLSYELVNWIGLGARDSLRLEAG 235
Query: 153 IVDPNTDFLPSTIFPHDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP- 204
+ D T P +A + ++G G ++G +V+ + +KR
Sbjct: 236 LCLYGHDM-NETTSPVEAGIIWSISKSRRVDGA--KAGGFLGADVILGQIANGVSKKRVG 292
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALT 258
++ G + + +G + A+ I+ + +
Sbjct: 293 FLVDGRAPVREGAEIVDQAGNVVGAITSGGFGPTLQAPVAMGYVSIEFAALGTQLNALVR 352
Query: 259 VHGVRVKASF 268
+ + S
Sbjct: 353 GRSLPITVSK 362
>gi|89069346|ref|ZP_01156705.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Oceanicola granulosus HTCC2516]
gi|89045113|gb|EAR51184.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Oceanicola granulosus HTCC2516]
Length = 372
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 79/284 (27%), Gaps = 47/284 (16%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL------F 83
DV L R G +L +++ D L ++ +++ + L
Sbjct: 79 DVAGLAEGRQRYGLFTDDSGGLLDDLMLANRG-DHLFLVVNAARKAHDLAHLRTLQGVEV 137
Query: 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID-------------------------- 117
+++ ++ +Q + + ++ F+D
Sbjct: 138 HEITDRALLALQGPAAEAVLADLAPEAADMRFMDVATLTLEGAECWVSRSGYTGEDGYEI 197
Query: 118 -ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
A+ L R H + + LR+ G+ D ST AL +
Sbjct: 198 SVPADRAEALARRLLAHGDVAPIGLGARDSLRLEAGLCLYGHDIDESTTPAEAALGWAIQ 257
Query: 177 GI----SLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT---DDIEIGT 229
+ G + G E + R R+R + G P+ DD +G
Sbjct: 258 KVRRRDGARAGGFPGAETILRELADGPARRRVGLRPEGRAPMREGVPLYAGADDDTPVGR 317
Query: 230 LGV------VVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ V G A+ + L + + +
Sbjct: 318 ITSGGFGPTVGGPVAMGYVPAELAAPGTVVHGELRGKRLPLTVT 361
>gi|328871677|gb|EGG20047.1| aminomethyltransferase [Dictyostelium fasciculatum]
Length = 433
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 57/276 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G+ I F+++I AD+ ++ S T G I+ +I+K D+
Sbjct: 112 SHMGQLRLHGRDRIEFMESISVADLQAAQENKSKLSVFTTENGGIIDDTMITKKA-DSLY 170
Query: 67 LEIDRSKRDSLIDKL--LFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
+ ++ D I + + R+ +V +E+ + +V E S + S
Sbjct: 171 VVVNAGCADKDIAHMNNKIAEFRASGKDVAMELMGDSALVAVQGPETERIVSQVLGRDLS 230
Query: 122 IADVLLH------------------------------------RTWGHNEK----IASDI 141
+ + R E + +
Sbjct: 231 KMEFMTQMDMTLDGIDLIVTRCGYTGEDGFEISVPNKHAEQFTRMLLDAESGVVVKPAGL 290
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQH 196
LR+ G+ D TI P +A + L +TK G + G ++ +
Sbjct: 291 GARDSLRLEAGLCLYGHDM-DETITPIEASLAWL----ITKRRREQGGFPGASIIQQQLK 345
Query: 197 RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
+ +KR +++G + + D IG +
Sbjct: 346 EGVSKKRVGLLSGI-PVREGAVIVDNDGKAIGKITS 380
>gi|102139787|gb|ABF69972.1| aminomethyltransferase, mitochondrial (glycine cleavage system T
protein), putative [Musa acuminata]
Length = 424
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G+ PFL+ ++ ADV L + +G + +++K+ +D L ++
Sbjct: 94 LSLRGRDCAPFLETLVIADVAGLRPGTGTLTVFTNERGGAIDDSVVTKVGDDHIYLVVNA 153
Query: 72 SKRDSLIDKL 81
RD + +
Sbjct: 154 GCRDKDLAHI 163
>gi|126664297|ref|ZP_01735287.1| glycine cleavage system aminomethyltransferase T [Flavobacteria
bacterium BAL38]
gi|126623690|gb|EAZ94388.1| glycine cleavage system aminomethyltransferase T [Flavobacteria
bacterium BAL38]
Length = 360
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 46/278 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G++A+ +Q + + D L A+ S + G I+ ++ KI ++ ++
Sbjct: 49 SHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNDGGIVDDLIVYKIADNHYM 108
Query: 67 LEIDRSKRDS----LIDKLLF----------YKLRS----NVIIEIQPINGVVLSWNQEH 108
L ++ S + + Y L + +Q + + L+ +
Sbjct: 109 LVVNASNIEKDWNWISSHNDLGVDMQNLSEGYSLLAIQGPKAAAAMQSLTSINLTNMGYY 168
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT---Y--------------------H 145
TF F + I + G E + +
Sbjct: 169 TFQIGEFAGKSDVIVSATGYTGSGGFEIYFKNEDAEYIWNKVFEAGAAFGIKPIGLAARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + K + E + + + + RK
Sbjct: 229 TLRLEMGFCLYGNDI-NDTTSPLEAGLGWI--TKFDKE-FTNSENLKKQKEAGVARKLVG 284
Query: 206 IITGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKALAIA 242
+P I + +G + ++ IA
Sbjct: 285 FEMVERGIPRHDYEIADANGNIVGIVTSGTQSPSMGIA 322
>gi|161523323|ref|YP_001578335.1| glycine cleavage system aminomethyltransferase T [Burkholderia
multivorans ATCC 17616]
gi|189351904|ref|YP_001947532.1| glycine cleavage system aminomethyltransferase T [Burkholderia
multivorans ATCC 17616]
gi|238687009|sp|A9ACU5|GCST_BURM1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|160340752|gb|ABX13838.1| glycine cleavage system T protein [Burkholderia multivorans ATCC
17616]
gi|189335926|dbj|BAG44996.1| aminomethyltransferase [Burkholderia multivorans ATCC 17616]
Length = 372
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G A F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRARAFFEYAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|163735502|ref|ZP_02142935.1| dimethylglycine dehydrogenase, putative [Roseobacter litoralis Och
149]
gi|161391315|gb|EDQ15651.1| dimethylglycine dehydrogenase, putative [Roseobacter litoralis Och
149]
Length = 811
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+R+ G + D L P + +D + KG +IGQE + + RK
Sbjct: 671 DSMRMEKGFMHWKADLLTE-FDPFETALDRF--VKPEKGPFIGQEALQKRMAHGPTRKLV 727
Query: 205 MIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMAL 257
+ G+ P G+ ++ D +GT+ VG A A D + + L
Sbjct: 728 TLKIGSTTTPAHGGASLMQGDTVVGTITSGDWGYRVGLNLAYAFVMPDMAEIGRVMQLDL 787
Query: 258 TVHGVRVKASFPH 270
V + P
Sbjct: 788 CGELVAAEVITPS 800
>gi|157125617|ref|XP_001660716.1| aminomethyltransferase [Aedes aegypti]
gi|108873536|gb|EAT37761.1| aminomethyltransferase [Aedes aegypti]
Length = 412
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK I ++I TAD+ L + +G IL ++S++ EDT + + S+
Sbjct: 90 LRGKDVISCFESICTADIKGLRNGTGTLTVFTNGKGGILDDLIVSRVSEDTLYVVSNASR 149
Query: 74 RDS 76
+D+
Sbjct: 150 KDT 152
>gi|150024926|ref|YP_001295752.1| glycine cleavage system aminomethyltransferase T [Flavobacterium
psychrophilum JIP02/86]
gi|166221549|sp|A6GXW3|GCST_FLAPJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149771467|emb|CAL42936.1| Aminomethyltransferase [Flavobacterium psychrophilum JIP02/86]
Length = 360
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G++A+ +Q + + D L A+ S + +G I+ +I KI ++ ++
Sbjct: 49 SHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNEGGIVDDLIIYKIADNHYM 108
Query: 67 LEIDRSKRD 75
L ++ S +
Sbjct: 109 LVVNASNIE 117
>gi|125591691|gb|EAZ32041.1| hypothetical protein OsJ_16220 [Oryza sativa Japonica Group]
Length = 357
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 56/281 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+
Sbjct: 29 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 88
Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81
+ L ++ RD + +
Sbjct: 89 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 148
Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133
Y S+ I+I + + E F S + +A LL ++ G
Sbjct: 149 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 206
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192
+ LR+ G+ D I P +A + G +G ++G +V+
Sbjct: 207 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 263
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ +R +++ P S S I+++ IG +
Sbjct: 264 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTS 303
>gi|126739037|ref|ZP_01754731.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
SK209-2-6]
gi|126719654|gb|EBA16362.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
SK209-2-6]
Length = 1010
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
V G A FL + T + TL R + T G ++ ++++I+EDT++
Sbjct: 679 VKGPDAGKFLDMMYTNMMSTLKIGKCRYGLMCTENGFLMDDGVVARIDEDTWL 731
>gi|289672400|ref|ZP_06493290.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv.
syringae FF5]
Length = 115
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 16 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 75
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 76 MTTTTGGAARVLQWLEIY 93
>gi|257483027|ref|ZP_05637068.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 678
Score = 43.7 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ F+
Sbjct: 466 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 525
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 526 MTTTTGGAARVLQWLEIY 543
>gi|302879997|ref|YP_003848561.1| glycine cleavage system T protein [Gallionella capsiferriformans
ES-2]
gi|302582786|gb|ADL56797.1| glycine cleavage system T protein [Gallionella capsiferriformans
ES-2]
Length = 362
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + V G + FL ++ + + A SA+L P G ++ +I + ED F
Sbjct: 52 HMRVVDVKGANVRSFLCYLLANNANKITLPGKALYSAMLRPDGGVIDDLIIYFMTEDWFR 111
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ D I +
Sbjct: 112 IVVNAGTADKDIAWMK 127
>gi|150398477|ref|YP_001328944.1| sarcosine oxidase subunit alpha family protein [Sinorhizobium
medicae WSM419]
gi|150029992|gb|ABR62109.1| sarcosine oxidase, alpha subunit family [Sinorhizobium medicae
WSM419]
Length = 987
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I++ G A FL + L LP AR +L G I S++ E+ F +
Sbjct: 657 IELSGSDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLAENRFFMTTTT 716
Query: 72 SKRDSLIDKLLF 83
+ +++ L F
Sbjct: 717 AYAAGVMNHLEF 728
>gi|297172049|gb|ADI23032.1| glycine cleavage system T protein (aminomethyltransferase)
[uncultured Planctomycetales bacterium HF0770_03I01]
Length = 382
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 61/309 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F I T D+ + + I G I+ ++S+++++ F L I
Sbjct: 70 VQIKGPDAFKFTNYITTKDLNKCKVNQCKYTLICDGSGGIINDPVLSRLDDNLFWLSISD 129
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ------------------------E 107
S ++ S +E+ + + E
Sbjct: 130 S---DVLLWAKGLAHNSKWNVELSEPDVAPMQVQGPKSKPLMISIFGPKVESLRYYHSME 186
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------RI 149
T S + + R + + + N K IK ++ + R+
Sbjct: 187 TTLSGMNMLVTRTGYTGEIGYEIYLKNAK-KDGIKLWNTMLEAGKLYNISPGGPSLIRRL 245
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
HGI + D P++ + + L + +IG++ + +I+ + + +K I
Sbjct: 246 EHGIRNYGQDMRLEN-NPYEVGLGF--AVDLDQEADFIGKKALIQIKKQELKQKIAGIEF 302
Query: 209 GTDDLPPSGS---PILTDDIEIGTLGVVVGKKAL------AIARIDKVDHAIKKGMALTV 259
GT+ + P++ + + G + L A+ I+K + K + +
Sbjct: 303 GTERMKGWNEDFWPVMENGKQTGWVSTAAYSPGLKKNIGYAMLPIEKTEIGTK--IIILA 360
Query: 260 HGVRVKASF 268
GV+ +A+
Sbjct: 361 RGVKTEATV 369
>gi|319779906|ref|YP_004139382.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165794|gb|ADV09332.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 817
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 54/278 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE---- 68
++ G A+ L + DV P + +L +G I ++++ E+ F +
Sbjct: 496 ELSGPDALKALDWVCANDVSK-PVGRLTYTQLLNTRGGIEADLTVARLAEEKFYIVTGTG 554
Query: 69 ----------------IDRSKRD--SLIDKLLFYKLRS-NVIIEIQPINGVVLSWN---- 105
+D D L R+ +V+ + + +S+
Sbjct: 555 FRTHDSSWIGDHIGEGLDARLVDVTEDFGTLSLMGPRARDVLSAVTEADVSNVSFPFGHV 614
Query: 106 QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHELR 148
+E + + R + L + LR
Sbjct: 615 REIAIAGHTIRALRVTYVGELGWELHVPIAATGEVFDALMAAGKKHDIRPIGYRALESLR 674
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMII 207
+ G +D P+ P +A + + L K +IG+ + + ++KR
Sbjct: 675 LEKGYRAWGSDITPNDT-PQEAGLGW--AVKLRKNTDFIGRRALEKTSGT-AMKKRFAGF 730
Query: 208 TGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
T D + IL + +G L G + +
Sbjct: 731 TVDDPEIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 766
>gi|296137002|ref|YP_003644244.1| glycine cleavage system T protein [Thiomonas intermedia K12]
gi|295797124|gb|ADG31914.1| glycine cleavage system T protein [Thiomonas intermedia K12]
Length = 386
Score = 43.7 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 60/294 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61
S+ + + G A L+ ++ D+ LP R + QG +L ++ +
Sbjct: 58 SHMGQVALRGDDAAAALETLVPMDIHGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGA 117
Query: 62 EDTFILEI-------DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
L + D + +L D+ + ++ +Q V ++
Sbjct: 118 GQELFLIVNAACKVQDVALLQTLSDRCEVVPMPEQALLALQGPQAVQTFARLVPEAADLV 177
Query: 115 FIDERF-------------------------------SIADVLLHRTWGHNEKIASDIKT 143
F+ R+ + A L E +
Sbjct: 178 FMTGRWMDVSTEGGAIRIFATRSGYTGEDGLEISVAAADAQRLARLLLSLPEVEPIGLGA 237
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVV-SRIQH 196
LR+ G+ D ST P +A + +G G + G EV+ ++I
Sbjct: 238 RDTLRLEAGLCLYGHDIDTSTT-PVEAGLTWAIQKVRRHG-GARAGGFPGAEVILAQIDQ 295
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV------GKKALAIA 242
N+ +R + + G D P G+ +L D G + G A+A
Sbjct: 296 PNLAPRRRIGLIGLDRTPVREGTELLAADGRSAGRVSSGSFAPSAGGPVAMAYV 349
>gi|304569707|ref|YP_010902.2| glycine cleavage system T protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233907|gb|ADP86761.1| glycine cleavage system T protein [Desulfovibrio vulgaris RCH1]
Length = 376
Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L +T ++ TL R +L G +L ++ + ED ++L ++ +
Sbjct: 73 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 132
Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109
S L +L +++ E I + G++ +E T
Sbjct: 133 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 191
Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
F ++ + R + A+ L R + + + + LR+ G+
Sbjct: 192 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 251
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208
D T P +A + + + + + + R R P+ I
Sbjct: 252 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 296
Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + L D +G + G A+A + V + + + RV+
Sbjct: 297 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKKPHAEEDSFIIKAARVEL 355
Query: 267 S 267
Sbjct: 356 E 356
>gi|329113560|ref|ZP_08242340.1| Aminomethyltransferase [Acetobacter pomorum DM001]
gi|326697082|gb|EGE48743.1| Aminomethyltransferase [Acetobacter pomorum DM001]
Length = 389
Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK 85
++ AD+ L + R + +G IL +++++ ED +L ++ + +++ ++ L
Sbjct: 90 LVPADIAALKHGRQRYTQFTNAEGGILDDLMVARL-EDGLLLVVNAACKEADLELLQ-SA 147
Query: 86 LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
L + ++E Q ++ E ++F ++
Sbjct: 148 LVAECVVEPQEDRALLALQGPEAEQVLAAFAED 180
>gi|312131227|ref|YP_003998567.1| glycine cleavage system t protein [Leadbetterella byssophila DSM
17132]
gi|311907773|gb|ADQ18214.1| glycine cleavage system T protein [Leadbetterella byssophila DSM
17132]
Length = 362
Score = 43.7 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 89/287 (31%), Gaps = 50/287 (17%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + GK A+ +Q + + D TL + S + G ++ L+ ++ E+ ++
Sbjct: 49 SHMGEFLLKGKGALDLIQKVTSNDASTLFDGKIQYSYLPNETGGVVDDLLVYRVSEEEYL 108
Query: 67 LEIDRSKRDSLIDKLLFY--------------KLRS----NVIIEIQPINGVVLSWNQEH 108
L ++ D + Y L + N + +Q + + LS +
Sbjct: 109 LVVNAGNIKKDWDWISKYNTEGVEMTDLSPETSLFAVQGPNAVKTLQKLTDIDLSTISYY 168
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNE---KIASDIKTY--------------------H 145
TF F + + G E A + +
Sbjct: 169 TFVKGKFAGHEDILISATGYTGAGGFEIYLPNAIAEEVWKKIFEAGAEFDIKPIGLGARD 228
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
LR+ G D T P +A + + TK + + + + RK
Sbjct: 229 TLRLEMGYCLYGNDITDETS-PLEAGLGWV--TKFTKE-FTNSAALKAEKEAGLKRKLVA 284
Query: 206 IITGTDDLPPSGSPI-LTDDIEIGTLGVV----VGKKALAIARIDKV 247
I +P S I D +IG + K +A+ +
Sbjct: 285 IEIIDKGIPRSHYEICTADGEKIGEVTSGTMSPSLNKGIALGYVSAA 331
>gi|71736897|ref|YP_272539.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71557450|gb|AAZ36661.1| glycine cleavage system T protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322212|gb|EFW78308.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. glycinea str. B076]
gi|320331872|gb|EFW87810.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330873050|gb|EGH07199.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330986836|gb|EGH84939.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 360
Score = 43.7 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|167041920|gb|ABZ06659.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_133I24]
Length = 998
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ I + G FL I T + LP AR +L G + ++I E+
Sbjct: 662 CDVTSLGKIDIKGPDTAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 721
Query: 64 TFILEIDRSKRDSLIDKLLFY 84
F + ++ +++ L +Y
Sbjct: 722 HFHMTTTTAQAVNVLAHLEYY 742
>gi|222054356|ref|YP_002536718.1| glycine cleavage system T protein [Geobacter sp. FRC-32]
gi|221563645|gb|ACM19617.1| glycine cleavage system T protein [Geobacter sp. FRC-32]
Length = 363
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 87/241 (36%), Gaps = 41/241 (17%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKLLFYKL 86
V ++P +R +L G I+ ++ ++ E+ ++ ++ + D+ + +L
Sbjct: 76 VKSIPVGRSRYGFLLNENGGIIDDLIVFRLGEEEAMVVVNAATIDNDFAVIQSRLKQGTS 135
Query: 87 RSNV-----IIEIQ-PINGVVLS---WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-- 135
+N+ +++Q P++ +L+ + F+ R D ++ RT E
Sbjct: 136 FTNISAATGKLDLQGPLSRQLLAEKFGPELAAIPYFKFVKTRLLGVDAIVSRTGYTGELG 195
Query: 136 -----KIASDIKTYHE-----------------LRINHGIVDPNTDFLPSTIFPHDALMD 173
+ + LR+ G +D + P +A +
Sbjct: 196 YEIFLPAEKVAELWDLLLADQRVKPAGLGARDVLRLEVGYSLYGSDI-DESTTPLEAGLG 254
Query: 174 LLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVV 233
++L K +IG+E + + Q + R + + P I + +GT+
Sbjct: 255 AF--VNLDKE-FIGREALRKQQQTGLPRVKAAFQVQSRRSPRHHYEICFEGETVGTVTSG 311
Query: 234 V 234
V
Sbjct: 312 V 312
>gi|289624824|ref|ZP_06457778.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289647725|ref|ZP_06479068.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. aesculi str. 2250]
gi|330866559|gb|EGH01268.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 360
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|85715196|ref|ZP_01046180.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A]
gi|85698111|gb|EAQ35984.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A]
Length = 387
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 73/264 (27%), Gaps = 48/264 (18%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A L+ ++ D++ + R + G IL ++ + D L ++ + + +
Sbjct: 76 DAALALERLVPQDIVAVAPGRQRYAQFTNAAGGILDDLMVVNLG-DHLFLVVNGACKAAD 134
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS----FIDERFSIADVLLHRTWGH 133
L + L IE+ +V + + RF A + R G
Sbjct: 135 EAHLREH-LSDACTIEVLADRALVALQGPKAASVLAKICPEAPAMRFMDASARIMRVAGD 193
Query: 134 NEKIASDIKTY------------------------------------HELRINHGIVDPN 157
Y LR+ G+
Sbjct: 194 AVDCLVSRSGYTGEDGYEISIPGAHAENVVSALLDDPDVMPVGLGARDSLRLEAGLCLYG 253
Query: 158 TDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
D +T P +A ++ G + G +V+ + R+R +
Sbjct: 254 HDI-DATTTPIEAALEWSVQKSRRSGGARAGGFPGADVILSQFEQGAARRRVGMKPEGRA 312
Query: 213 LPPSGSPILTDDIEIGTLGVVVGK 236
G+ + D + +G V
Sbjct: 313 PVREGALLFADAGSVDPIGTVTSG 336
>gi|298484852|ref|ZP_07002952.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298160706|gb|EFI01727.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 360
Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E +
Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|84502755|ref|ZP_01000874.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
batsensis HTCC2597]
gi|84389150|gb|EAQ01948.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
batsensis HTCC2597]
Length = 971
Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + + + TL R +L G I+ ++I D
Sbjct: 636 CDVSTLGKIDVQGPDAAAFLDFVYSNTMSTLKQGKVRYGLMLREDGHIMDDGTCARIGPD 695
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122
+++ + ++ + F + V ++P V ++S ++ + + + R +
Sbjct: 696 HYLVSTTTAAAGEVMRHMEF---AAQV---LRPELDVHLVSVTEQWAQTAIAGPESRDLL 749
Query: 123 ADVL 126
+VL
Sbjct: 750 NEVL 753
>gi|315498576|ref|YP_004087380.1| glycine cleavage system t protein [Asticcacaulis excentricus CB 48]
gi|315416588|gb|ADU13229.1| glycine cleavage system T protein [Asticcacaulis excentricus CB 48]
Length = 370
Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A+ L+A+ D L + S +L G IL +++S+ + D F
Sbjct: 54 SHMGQARLSGMDAVYTLEALTPTDFAALKPGKQKYSLLLNEAGGILDDWMVSRPQTDGFF 113
Query: 67 LEIDRSKRD 75
L ++ + +D
Sbjct: 114 LVVNAACKD 122
>gi|114706135|ref|ZP_01439038.1| aminomethyltransferase [Fulvimarina pelagi HTCC2506]
gi|114538981|gb|EAU42102.1| aminomethyltransferase [Fulvimarina pelagi HTCC2506]
Length = 373
Score = 43.3 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
I V GK + L A++T+D+ + + S I+ G ++ L+ + ED F L
Sbjct: 56 LRMINVSGKDSEAVLNAMLTSDIAKMKPGQSAISNIVDENGSLIDDVLVYRDGEDVFRL 114
>gi|186470763|ref|YP_001862081.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
gi|184197072|gb|ACC75035.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
Length = 376
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 91/301 (30%), Gaps = 67/301 (22%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A L T D+ L + +AIL +GK + ++ + + F++
Sbjct: 63 GPHAESLLDWATTRDIGKLYPGKSAYAAILNEEGKFIDDCIVYRTGPNAFMVVHGAGTGY 122
Query: 76 SLIDKLLFYKLRSNVII------------EIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+L+ V + Q ++ + + R
Sbjct: 123 E---RLVRSAQGRQVAVLFDDDLHDLSLQGPQAVDFLAEHVPGIRDLPYFHHVQTRLFGR 179
Query: 124 DVLLHRTWGHNEK---------------------------IASDIKTYHELRINHGI--- 153
V++ RT E+ + LR+ +
Sbjct: 180 PVMISRTGYTGERGYEIFCKAADAPLIWDTILAEGAAFGIVPCAFLALDWLRVESYLLFY 239
Query: 154 ------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR--NIIRKRPM 205
+ P D + +D +S K + G +R R R R
Sbjct: 240 PYDNSEMYPFADEKAGDTLW-ELGLDFT--VSPGKTEFCG----AREHFRLAGKERFRIY 292
Query: 206 IIT-GTDDLPPSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVH 260
+ +G + D ++G + + ++LAIAR++ V HA + G+AL V
Sbjct: 293 GVDIAASKAASAGDTLWRDGEQVGVVTCGMYSRLTNRSLAIARMN-VAHA-RNGVALEVK 350
Query: 261 G 261
G
Sbjct: 351 G 351
>gi|115359290|ref|YP_776428.1| sarcosine oxidase alpha subunit family protein [Burkholderia
ambifaria AMMD]
gi|115284578|gb|ABI90094.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
AMMD]
Length = 1003
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNDAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D ++ P+D M L ++ +K C +G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGMGGL--VAKSKDC-LGKRSLSRSDTS 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935
>gi|226193245|ref|ZP_03788855.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
gi|225934845|gb|EEH30822.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pakistan 9]
Length = 353
Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 33 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 92
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 93 RVVVNAGTAE 102
>gi|289610116|emb|CBI60319.1| unnamed protein product [Sordaria macrospora]
Length = 295
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60
S+ + + G A L+A++ D+ L R S +L QG IL +++++
Sbjct: 75 SHMGQLLIHGPDATAALEALLPGDLKILKPAKMRYSLLLDDQGGILDDLMVTRLGSEQPF 134
Query: 61 ----EEDTFILEIDRSKRDSLIDKLL 82
+D F + ++ + + I L
Sbjct: 135 GEVEGDDAFYMVVNGATKYDDIGHLR 160
>gi|134281505|ref|ZP_01768213.1| glycine cleavage system T protein [Burkholderia pseudomallei 305]
gi|254194593|ref|ZP_04901024.1| glycine cleavage system T protein [Burkholderia pseudomallei S13]
gi|134247172|gb|EBA47258.1| glycine cleavage system T protein [Burkholderia pseudomallei 305]
gi|169651343|gb|EDS84036.1| glycine cleavage system T protein [Burkholderia pseudomallei S13]
Length = 391
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 71 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 130
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 131 RVVVNAGTAE 140
>gi|53720969|ref|YP_109955.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei K96243]
gi|53726142|ref|YP_104498.1| glycine cleavage system aminomethyltransferase T [Burkholderia
mallei ATCC 23344]
gi|124385115|ref|YP_001027523.1| glycine cleavage system aminomethyltransferase T [Burkholderia
mallei NCTC 10229]
gi|126441730|ref|YP_001060919.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 668]
gi|126449179|ref|YP_001082581.1| glycine cleavage system aminomethyltransferase T [Burkholderia
mallei NCTC 10247]
gi|126451834|ref|YP_001068216.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 1106a]
gi|167740740|ref|ZP_02413514.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 14]
gi|167817958|ref|ZP_02449638.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 91]
gi|167826318|ref|ZP_02457789.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 9]
gi|167847832|ref|ZP_02473340.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei B7210]
gi|167896396|ref|ZP_02483798.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 7894]
gi|167904802|ref|ZP_02492007.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei NCTC 13177]
gi|167913077|ref|ZP_02500168.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 112]
gi|167921015|ref|ZP_02508106.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei BCC215]
gi|228969295|ref|YP_331543.2| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei 1710b]
gi|229008327|ref|YP_994588.2| glycine cleavage system aminomethyltransferase T [Burkholderia
mallei SAVP1]
gi|254175233|ref|ZP_04881894.1| glycine cleavage system T protein [Burkholderia mallei ATCC 10399]
gi|254183983|ref|ZP_04890574.1| glycine cleavage system T protein [Burkholderia pseudomallei 1655]
gi|254186449|ref|ZP_04892966.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254260189|ref|ZP_04951243.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710a]
gi|254298745|ref|ZP_04966196.1| glycine cleavage system T protein [Burkholderia pseudomallei 406e]
gi|254357467|ref|ZP_04973741.1| glycine cleavage system T protein [Burkholderia mallei 2002721280]
gi|59797676|sp|Q62FM9|GCST_BURMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|59797689|sp|Q63PL4|GCST_BURPS RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221539|sp|A3MQP5|GCST_BURM7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221540|sp|A2S6F4|GCST_BURM9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221541|sp|A3P0U5|GCST_BURP0 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166221542|sp|A3NEZ8|GCST_BURP6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|52211383|emb|CAH37373.1| aminomethyltransferase [Burkholderia pseudomallei K96243]
gi|52429565|gb|AAU50158.1| glycine cleavage system T protein [Burkholderia mallei ATCC 23344]
gi|124293135|gb|ABN02404.1| aminomethyltransferase [Burkholderia mallei NCTC 10229]
gi|126221223|gb|ABN84729.1| aminomethyltransferase [Burkholderia pseudomallei 668]
gi|126225476|gb|ABN89016.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106a]
gi|126242049|gb|ABO05142.1| aminomethyltransferase [Burkholderia mallei NCTC 10247]
gi|148026531|gb|EDK84616.1| glycine cleavage system T protein [Burkholderia mallei 2002721280]
gi|157808499|gb|EDO85669.1| glycine cleavage system T protein [Burkholderia pseudomallei 406e]
gi|157934134|gb|EDO89804.1| glycine cleavage system T protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160696278|gb|EDP86248.1| glycine cleavage system T protein [Burkholderia mallei ATCC 10399]
gi|184214515|gb|EDU11558.1| glycine cleavage system T protein [Burkholderia pseudomallei 1655]
gi|254218878|gb|EET08262.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710a]
Length = 372
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|115401072|ref|XP_001216124.1| hypothetical protein ATEG_07503 [Aspergillus terreus NIH2624]
gi|114190065|gb|EAU31765.1| hypothetical protein ATEG_07503 [Aspergillus terreus NIH2624]
Length = 869
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 82/273 (30%), Gaps = 59/273 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ LQ + DV T + +L G IL ++++ E+ + +I +
Sbjct: 535 VSGPGAVHLLQRLTARDVAT-KPGTVTYTLLLDDHGYILGDIFVTRLGENEY--QIGANS 591
Query: 74 RDSLIDKLLFYK-------------LR--------------------SNVIIEIQPINGV 100
L+ L + +R N+ + G+
Sbjct: 592 ATDLV-YLTRHARHHRETRPSEWVEVRDITGGTCCLGLWGPRAGDVLRNICSDDLSDTGL 650
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143
++ S I R S E I +
Sbjct: 651 PYFNAKQTILSGIPVIMLRKSYVGEFGWEIQTTAEYGQRLWDVVLQAGKLHGLIPAGRSA 710
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRK 202
++ LR+ G D P +A + L+ + L K G ++G+ + R N RK
Sbjct: 711 FNSLRLEKGYRTFGIDMTTEHD-PLEAGL--LSAVDLDKNGDFLGKAALRRRVLDNPARK 767
Query: 203 -RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R +++ + P+ D G +
Sbjct: 768 LRCLVVNDGRSVVMGKEPVFYDKKPSGYVTAAA 800
>gi|46449510|gb|AAS96161.1| glycine cleavage system T protein [Desulfovibrio vulgaris str.
Hildenborough]
Length = 362
Score = 43.3 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L +T ++ TL R +L G +L ++ + ED ++L ++ +
Sbjct: 59 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 118
Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109
S L +L +++ E I + G++ +E T
Sbjct: 119 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 177
Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
F ++ + R + A+ L R + + + + LR+ G+
Sbjct: 178 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 237
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208
D T P +A + + + + + + R R P+ I
Sbjct: 238 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 282
Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + L D +G + G A+A + V + + + RV+
Sbjct: 283 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKKPHAEEDSFIIKAARVEL 341
Query: 267 S 267
Sbjct: 342 E 342
>gi|167721762|ref|ZP_02404998.1| glycine cleavage system aminomethyltransferase T [Burkholderia
pseudomallei DM98]
Length = 372
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|296392279|ref|ZP_06881754.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAb1]
Length = 1006
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 88/289 (30%), Gaps = 57/289 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNVI-IEIQ 95
+ +++ L Y KL + V I++
Sbjct: 731 MTTTTGGAARVLEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLD 790
Query: 96 PINGVVLSWNQEHTFS------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY----- 144
++W + SF E +V G E +A Y
Sbjct: 791 KDAFPFMTWKEGKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPY 850
Query: 145 -----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
H LR G + D +++ P D M G S +IG ++R
Sbjct: 851 GTETMHVLRAEKGFIIVGQD-TDASVTPDDLNMGWAVGRS-KPFSWIGWRGMNRTDCLRE 908
Query: 200 IRKRPMIITGTDD--LPPSGSPILTDD------IEIGTLGVVVGKKALA 240
RK+ + + ++ + P G+ ++ D +G + +L
Sbjct: 909 DRKQLVGLRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLG 957
>gi|237814300|ref|YP_002898751.1| glycine cleavage system T protein [Burkholderia pseudomallei
MSHR346]
gi|237506294|gb|ACQ98612.1| glycine cleavage system T protein [Burkholderia pseudomallei
MSHR346]
Length = 398
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 78 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 137
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 138 RVVVNAGTAE 147
>gi|217423966|ref|ZP_03455466.1| aminomethyltransferase [Burkholderia pseudomallei 576]
gi|238561586|ref|ZP_00441876.2| glycine cleavage system T protein [Burkholderia mallei GB8 horse 4]
gi|242314700|ref|ZP_04813716.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106b]
gi|251767081|ref|ZP_04819947.1| glycine cleavage system T protein [Burkholderia mallei PRL-20]
gi|254201577|ref|ZP_04907941.1| glycine cleavage system T protein [Burkholderia mallei FMH]
gi|254206911|ref|ZP_04913262.1| glycine cleavage system T protein [Burkholderia mallei JHU]
gi|76581070|gb|ABA50545.1| glycine cleavage system T protein [Burkholderia pseudomallei 1710b]
gi|121228292|gb|ABM50810.1| glycine cleavage system T protein [Burkholderia mallei SAVP1]
gi|147747471|gb|EDK54547.1| glycine cleavage system T protein [Burkholderia mallei FMH]
gi|147752453|gb|EDK59519.1| glycine cleavage system T protein [Burkholderia mallei JHU]
gi|217393029|gb|EEC33051.1| aminomethyltransferase [Burkholderia pseudomallei 576]
gi|238524383|gb|EEP87816.1| glycine cleavage system T protein [Burkholderia mallei GB8 horse 4]
gi|242137939|gb|EES24341.1| glycine cleavage system T protein [Burkholderia pseudomallei 1106b]
gi|243063901|gb|EES46087.1| glycine cleavage system T protein [Burkholderia mallei PRL-20]
Length = 398
Score = 43.3 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 78 SHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 137
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 138 RVVVNAGTAE 147
>gi|170078310|ref|YP_001734948.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
PCC 7002]
gi|254797882|sp|B1XP99|GCST_SYNP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169885979|gb|ACA99692.1| glycine cleavage system T protein [Synechococcus sp. PCC 7002]
Length = 363
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 93/313 (29%), Gaps = 50/313 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G++ I +Q ++ +++ L A+ + +L G I+ + +
Sbjct: 51 SHMGKFQLAGENLIAAMQKLVPSNLARLAPGQAQYTVLLNDHGGIIDDVIYYHQGDRQGF 110
Query: 67 LEIDRSKRDSLIDKLLFYKLRSN-VIIEIQPINGVVLS---------------------- 103
L ++ + D L + L + + + ++L+
Sbjct: 111 LIVNAATTQKDWDWLTHH-LTAQGITLTDVSQENILLAIQGPQAEKALQPVVENLDLATL 169
Query: 104 ----WNQEHTFSNSSFIDE------------RFSIADVLLHRTWGHNEKIASDIKTYHEL 147
Q F ++FI A L + + L
Sbjct: 170 KLFNHGQGQIFGETAFIARTGYTGEDGFEVMVAPTAGKKLWSALIDAGVMPCGLGARDTL 229
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMI 206
R+ G+ D P +A + L I K +I ++++ + + R+ +
Sbjct: 230 RLEAGLHLYGQDM-DDDTTPLEAGLGWL--IHWQEKDAFIAKDILQTQKAAGVQRRLVGL 286
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ +L + +G + ALA ++ + +
Sbjct: 287 EMQGRGIARHDYSVLVNGEAVGLVTSGTMSPTLEKAIALAYLPLEFSKVGQAVTVEIRGK 346
Query: 261 GVRVKASFPHWYK 273
+ +Y+
Sbjct: 347 QYPAQVVKKPFYR 359
>gi|116255763|ref|YP_771596.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum
bv. viciae 3841]
gi|115260411|emb|CAK03515.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum
bv. viciae 3841]
Length = 985
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 29/81 (35%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ GK A FL I L AR +L G I S+ +
Sbjct: 646 LCDVSTLGKIEISGKDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTASRFSD 705
Query: 63 DTFILEIDRSKRDSLIDKLLF 83
D F + + ++ L F
Sbjct: 706 DHFFMTTTTALAAGVLTHLEF 726
>gi|321461805|gb|EFX72833.1| hypothetical protein DAPPUDRAFT_308047 [Daphnia pulex]
Length = 403
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK + FL++++ D+ +LP S T G I+ F+++K + +
Sbjct: 85 IHGKDNVKFLESLMVGDIQSLPNNHGTLSVFTTDSGGIIDDFIVNKTSLGYLYVVSNAGC 144
Query: 74 RDSLIDKL-LFYKLRSN----VIIEIQPINGVVLSWNQ 106
RD + L L V IE+ G++
Sbjct: 145 RDKDLALLNSKLALAKKEGLDVDIEVLKERGLLAIQGP 182
>gi|319783089|ref|YP_004142565.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168977|gb|ADV12515.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 856
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 89/298 (29%), Gaps = 70/298 (23%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67
+V G +A FL ++T + + + +L GK++ F I+K ED F++
Sbjct: 495 EVSGPAAEDFLNRLMTNRMPK--TRRIVLTPMLNEFGKLIGDFTIAKAAEDRFMIWGSSA 552
Query: 68 -----------EIDRS--------------------KRDSLIDKLLFYKLRSNVIIEIQP 96
+ + K L+ KL V +++
Sbjct: 553 AQKYHMRWFEKHLPKDGTVRIHRFDQTLVGLSIAGPKSRDLLQKL--------VDVDVST 604
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139
+ + + ++ R + L + W +
Sbjct: 605 KAFRFMDFREMAVGGAPCMVN-RITYTGDLGYEIWMAPAYERLVYKAIKDAGEEFGLVDF 663
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN- 198
++ +R+ + P P + MD I L K +IG+E ++ Q
Sbjct: 664 GMRALLSMRLEKNFPTWFRELRP-IYGPFEGAMDRF--IKLEKNDFIGREAAAKEQAEGP 720
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+R+ I+ TD PI G V R DK I+ A
Sbjct: 721 KLRRVSFIVDATDADVMGDEPIWA--KVSKDYGTVEKPHGYGAPRFDKGGKEIRGSKA 776
>gi|254449580|ref|ZP_05063017.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238]
gi|198263986|gb|EDY88256.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238]
Length = 1007
Score = 43.3 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TLP R + G + ++++I++DT++
Sbjct: 681 VKGPDAGKFLDMMYTNMMSTLPVGKCRYGLMCGENGFLSDDGVVARIDDDTWLCHTTTGG 740
Query: 74 RDSLIDKL 81
D++ +
Sbjct: 741 ADTVHAHM 748
>gi|330972174|gb|EGH72240.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 360
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGPQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|319781765|ref|YP_004141241.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167653|gb|ADV11191.1| glycine cleavage T protein (aminomethyl transferase) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 418
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 93/328 (28%), Gaps = 79/328 (24%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI------- 66
+ G A + A+I D+ L + G ++ L+ +++E TF
Sbjct: 77 IAGPDAERMMDALIPRDIKKLQVGQIYYAPWCDENGHVVGDGLVFRMDETTFRVSADPGL 136
Query: 67 ---------LEID------------------RSKRDSL---IDKLLFYKLRSNVIIEIQP 96
L++ R +++ + +L F +L + V I +
Sbjct: 137 SWWKQHAEGLDVRVTDISDSYGILTLQGPRSREVLEAVTQSVQELPFSRL-AIVTIAGRR 195
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP 156
+ + + EH + D+ ++ D + + + R+ G++
Sbjct: 196 VEILRQGFTGEHGYELWVKADDGAAVWDA-VEAAGKPFGILPAGAWALDIARLEAGLLIV 254
Query: 157 NTDFLPS---------------TIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
D+ + P D + L + K +IG+ + R+ + R
Sbjct: 255 GYDYTSAGPDHGGASIQAAGKYRASPFDLGLGRL--VDFRKADFIGKAALQRMSNTGDHR 312
Query: 202 KRP-MIITGTDDLPPSGSP----------------ILTDDIEIGTLGVVVGK------KA 238
+ + I + L G E+G V
Sbjct: 313 QLVGLDIDWSQALDGKGLESNAPGNLRRVQWYPLKAFRGGKEVGHASSVAWSPSTGRMIG 372
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKA 266
R + + + + GV
Sbjct: 373 FGHLRREAAETGTELTLKWNKDGVAADV 400
>gi|225713952|gb|ACO12822.1| Aminomethyltransferase, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 391
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 101/306 (33%), Gaps = 51/306 (16%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
KV GK F++++ T D+ TL + +G I+ ++ D L +
Sbjct: 75 KVYGKDRRQFIESLTTLDLKTLKEDSGSLTIFTNEKGGIVDDLIVMNTSLDFLYLVTNAG 134
Query: 73 KRDSLIDKLLFYKLRSN-----VIIEIQPINGVVLSWN-------QEHTFSN-------- 112
++ I + L + +EI + ++ Q HT +
Sbjct: 135 CKEKDILLMKKKVLEMKSDNMDIELEIINDHALIAIQGPKMAEYFQPHTDVDLKKLKFMQ 194
Query: 113 ------SSFIDERFSI-----------------ADVLLHRTWGHNEKI-ASDIKTYHELR 148
R + A+ +L + N I + + LR
Sbjct: 195 TSLGTVCGVPMCRITRCGYTGEDGVEVSIPNEHAEAVLQKLTNSNSSIKLAGLGARDSLR 254
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ D I P +A ++ L S K G + G ++ + + + + +
Sbjct: 255 LEAGLCLYGNDM-NEDITPVEASLNWLISKSRRKEGGFPGHSIILNQLSKKDFQSKRIGL 313
Query: 208 TGTDDLPPSGSPIL-TDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALTVHGV 262
P SG IL + + +IG + L A+ I+K I + + V
Sbjct: 314 VSNGPPPRSGMEILDSKENQIGVITSGCPSPTLKHNVAMGYINKSMSKIGNTVYVKVRNK 373
Query: 263 RVKASF 268
V+A+
Sbjct: 374 IVEATI 379
>gi|255935673|ref|XP_002558863.1| Pc13g04270 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583483|emb|CAP91496.1| Pc13g04270 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 850
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A+ LQ + T+D+ T + +L G I + ++++D F +
Sbjct: 516 VRGPGAVGLLQRLTTSDITT-KPGTVTYTLLLNDHGGIRGDIFVLRLDDDVFQI 568
>gi|78214098|ref|YP_382877.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CC9605]
gi|78198557|gb|ABB36322.1| glycine cleavage system T protein [Synechococcus sp. CC9605]
Length = 375
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 87/317 (27%), Gaps = 52/317 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ G + LQ ++ +D+ + A S +L +G I ++ E
Sbjct: 59 SHMGVLRLEGANPKDALQRLLPSDLHRIGPGEACYSVLLNERGGIRDDLIVYDCGAIDAE 118
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF-------SNSS 114
+L I+ + DS + + + + +GV+L+
Sbjct: 119 RGALMLVINAACADSDTAWIREQMEPAGLKVTDIKKDGVLLALQGPEAIGVLQELSGEEL 178
Query: 115 FIDERF--------------------------------SIADVLLHRTWGHNEKIASDIK 142
RF + L + +
Sbjct: 179 SGLPRFGHRMLNLKGLRQPVFSARTGYTGEDGAELLLNADDGQKLWQLLLDRGVTPCGLG 238
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ + D P +A + L + + ++G++ + + ++
Sbjct: 239 ARDTLRLEAAMHLYGQDM-NDETNPFEAGLGWLVHLEMPVN-FVGRQALEQAAESGPTKR 296
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMA 256
+ + P++ + +G + ALA + +
Sbjct: 297 LVGLKLQGRAIARHDYPVVHNGETVGIVTSGTWSPTLEEAIALAYVPPSLAKLGTELSVE 356
Query: 257 LTVHGVRVKASFPHWYK 273
+ +YK
Sbjct: 357 IRGKAQPATVVRKPFYK 373
>gi|13471332|ref|NP_102901.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
gi|14022077|dbj|BAB48687.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
Length = 1002
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 17/211 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V +S I V G A FL + T TL AR +L G ++ E
Sbjct: 667 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDGFAFDDGTTWRLGEQ 726
Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQ-----EHTFSN 112
F++ + ++ L ++ L+ +V G + + +
Sbjct: 727 DFLMTTTTANAGKVMQHLEYFLDVIWPDLKVHVTSVTDEWAGAAIGGPKARQILAACVTG 786
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIFPH- 168
++ + ++ + G I + G + L P
Sbjct: 787 TAVDNATLPFMGIVHGQIAGVPVMICRLSFSGEMAFEVYSGAGHGTHVWEALIEAGKPFG 846
Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRIQHR 197
++ L + + KG G E+ R R
Sbjct: 847 LVTYGLEALGTMRIEKGHVTGAEIDGRTTAR 877
>gi|88809468|ref|ZP_01124976.1| glycine cleavage system T protein [Synechococcus sp. WH 7805]
gi|88786687|gb|EAR17846.1| glycine cleavage system T protein [Synechococcus sp. WH 7805]
Length = 369
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 90/299 (30%), Gaps = 66/299 (22%)
Query: 1 MSSVYLSNQSFIKVCG---KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI 57
M +S+ +++ G K A LQ ++ D+ + A S +L G I +I
Sbjct: 45 MGLFDISHMGVLRIHGINPKDA---LQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLII 101
Query: 58 SKIEEDT------------------------------FILEIDRSKRDSL---------- 77
+ E T + L+I K D +
Sbjct: 102 YDLGESTADHGKASLIVVINAACAAADTAWITEQLTPWGLQITDEKADGVLLALQGPEAL 161
Query: 78 ----------IDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL 127
+ KL + R E+ ++ V +T + + L
Sbjct: 162 AWMQHLSGVDLKKLPRFAHR---TFEVPGLSRPVFCARTGYTGEDGVELLLGRDDGRSLW 218
Query: 128 HRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIG 187
+R + LR+ + D + P +A + L + + + G
Sbjct: 219 NRLVAEG-VTPCGLGARDTLRLEAAMHLYGQDM-DADTTPFEAGLGWLVHLEMP-ATFTG 275
Query: 188 QEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK----KALAIA 242
+ + R R+ + + G P++ + + G++ +A+A+A
Sbjct: 276 RSALERAVETGPSRRLVGLKLKGRAIARHGYPVIHNGEQAGSITSGSWSPTLQEAIALA 334
>gi|296157518|ref|ZP_06840353.1| glycine cleavage system T protein [Burkholderia sp. Ch1-1]
gi|295892290|gb|EFG72073.1| glycine cleavage system T protein [Burkholderia sp. Ch1-1]
Length = 372
Score = 43.3 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPNGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ D I + + G+ ++ + + + + A
Sbjct: 112 RVVVNAGTADKDIAWFGR--------LNAEGGFGLTIT-----PRRDYAIVAVQGPNARE 158
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ +T +K ++ RI
Sbjct: 159 KVWQTVPATRAATEALKPFNAARIA 183
>gi|114707355|ref|ZP_01440252.1| sarcosine oxidase, alpha subunit [Fulvimarina pelagi HTCC2506]
gi|114537236|gb|EAU40363.1| sarcosine oxidase, alpha subunit [Fulvimarina pelagi HTCC2506]
Length = 994
Score = 43.3 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ I T L R +L G ++ +++++ ED F
Sbjct: 661 STLGKIEVVGPDAAEFMNRIYTNAWAKLKVGGCRYGLMLGENGFVMDDGVVARLAEDRFH 720
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ + + Y
Sbjct: 721 VTTTTGGAPRVFQHMEDY 738
>gi|126727990|ref|ZP_01743811.1| aminomethyl transferase family protein [Rhodobacterales bacterium
HTCC2150]
gi|126702727|gb|EBA01839.1| aminomethyl transferase family protein [Rhodobacterales bacterium
HTCC2150]
Length = 382
Score = 43.3 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 26/56 (46%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G A + + T +V + + ++IL GK + +I I +++++
Sbjct: 62 VHVSGADAAYVIDRVTTRNVEKIAPGRSTYASILNSDGKFIDDCIIYHIAVNSWLV 117
>gi|330812232|ref|YP_004356694.1| sarcosine oxidase, alpha subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380340|gb|AEA71690.1| sarcosine oxidase, alpha subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 1005
Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 731 MTTTTGGAARVLQWLEIY 748
>gi|149916228|ref|ZP_01904749.1| probable aminomethyltransferase protein [Roseobacter sp. AzwK-3b]
gi|149809888|gb|EDM69739.1| probable aminomethyltransferase protein [Roseobacter sp. AzwK-3b]
Length = 790
Score = 43.3 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 60/288 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------- 65
+V G A +Q +T ++ L +A+ G ++ + ++ +D F
Sbjct: 464 EVTGPDAEALMQLCVTRNMKKLAVGQVVYTAMCYDHGGMIDDGTVFRLGQDNFRWIGGND 523
Query: 66 ----ILE---------------IDRSKRDSLIDKLLFYKLRS-------NVIIEIQPING 99
L D+ ++ L L + I+
Sbjct: 524 TSGLWLRQQAQERGMNAFVRNSTDQLHNIAVQGPLSREILSALIWTPPTQPTIDELEWFR 583
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTW---GHNEKIASDIKTYHEL--------- 147
++ + + + R + L + + H ++ I L
Sbjct: 584 FTIARIGD--YDGIPLVVSRTGYSGELGYEVFCHPKHAPQVFDAIWAEGALKGMLPLGLE 641
Query: 148 -----RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
RI G++ N +F P +A + + + +IG+ + + ++
Sbjct: 642 ALDMLRIESGLIFANAEFC-DRTDPFEAGIGFAVPLKTQEDDFIGR--TALENRKAHPQR 698
Query: 203 RPMIITGTDDLPPSGSP-ILTDDIEIGTLGVVVG----KKALAIARID 245
+ + + + PSG + +IG + + K +A+AR+D
Sbjct: 699 KLVGLEIESGIVPSGGDCVRMGRAQIGEITSAMRSPILGKTIALARLD 746
>gi|215708742|dbj|BAG94011.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 409
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 56/336 (16%), Positives = 108/336 (32%), Gaps = 72/336 (21%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+
Sbjct: 80 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 139
Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81
+ L ++ RD + +
Sbjct: 140 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 199
Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133
Y S+ I+I + + E F S + +A LL ++ G
Sbjct: 200 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 257
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192
+ LR+ G+ D I P +A + G +G ++G +V+
Sbjct: 258 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 314
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGVV----VGKKALAIARIDKV 247
+ +R +++ P S S I+++ IG + KK +A+ +
Sbjct: 315 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTSGGFSPCLKKNIAMGYVKSG 373
Query: 248 DHAIKKGMALTVHG------------VRVKASFPHW 271
H + V G V K P W
Sbjct: 374 LHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKPSW 409
>gi|172064078|ref|YP_001811729.1| sarcosine oxidase alpha subunit family protein [Burkholderia
ambifaria MC40-6]
gi|171996595|gb|ACB67513.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
MC40-6]
Length = 1003
Score = 42.9 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTS 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935
>gi|74316196|ref|YP_313936.1| glycine cleavage system aminomethyltransferase T [Thiobacillus
denitrificans ATCC 25259]
gi|74055691|gb|AAZ96131.1| glycine cleavage system T protein [Thiobacillus denitrificans ATCC
25259]
Length = 362
Score = 42.9 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+ + G + FL+ ++ +V L A S +L G ++ +I ++E F L ++
Sbjct: 58 LDIRGTNVRAFLRRLVANNVDKLQVAGKALYSCMLNEAGGVIDDLIIYFMDESWFRLVVN 117
Query: 71 RSKRDSLIDKLLFY 84
+ + +
Sbjct: 118 AGTAEKDLAWMEKM 131
>gi|227543091|ref|ZP_03973140.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181079|gb|EEI62051.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 391
Score = 42.9 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A +L AD L A+ + ++ G+I+ +I +E+ F
Sbjct: 74 LSHMGEIIVSGPEATEYLNYAFIADYSKLAVGRAKYNHMVEKDGRIIDDLIIYHVEDGIF 133
Query: 66 ILEIDRSKRDSL 77
+ + +++
Sbjct: 134 WVVPNAGNAETV 145
>gi|120602448|ref|YP_966848.1| glycine cleavage system T protein [Desulfovibrio vulgaris DP4]
gi|120562677|gb|ABM28421.1| glycine cleavage system T protein [Desulfovibrio vulgaris DP4]
Length = 376
Score = 42.9 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 64/301 (21%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G A L +T ++ TL R +L G +L ++ + ED ++L ++ +
Sbjct: 73 LRGPGAKQALARAVTHNLETLKPGRCRYGFLLNEAGCVLDDLIVYCLAEDDYMLVVNGAC 132
Query: 74 RDSLIDKLLFYKLRSNVIIE----------------IQPINGVVLSWNQE--------HT 109
S L +L +++ E I + G++ +E T
Sbjct: 133 IASDFAAL-RERLPASLHFEDISAATAKLDLQGPKSIDALEGLLGRSFRELGYFAFTHTT 191
Query: 110 FSNSSFIDER--------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD 155
F ++ + R + A+ L R + + + + LR+ G+
Sbjct: 192 FDGANLMVSRTGYTGELGYELYLPWDKAETLWTRLLENADVKPAGLGARDTLRLEVGLPL 251
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR-------PMIIT 208
D T P +A + + + + + + R R P+ I
Sbjct: 252 YGQDLDT-THTPAEAGYEGM--------------LTNTVDYVGKGRDREVREVLVPLAIP 296
Query: 209 GTDDLPPSGSPILTDDIEIGTL--GVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + L D +G + G A+A + V + + + RV+
Sbjct: 297 GRRAARHGDAVALPDGTVVGVVTSGSFAPSVGHAVA-LAYVKRPHAEEDSFIIKAARVEL 355
Query: 267 S 267
Sbjct: 356 E 356
>gi|170695670|ref|ZP_02886813.1| sarcosine oxidase, alpha subunit family [Burkholderia graminis
C4D1M]
gi|170139469|gb|EDT07654.1| sarcosine oxidase, alpha subunit family [Burkholderia graminis
C4D1M]
Length = 1000
Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 83/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ + ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99
+ ++ L ++R V+ ++ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ +E T + ++ R S + L W + DI
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ PHD M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDVGM---GGLVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLADDPSFVIPEGSQIVAG 928
>gi|148553866|ref|YP_001261448.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
gi|148499056|gb|ABQ67310.1| glycine cleavage T protein (aminomethyl transferase) [Sphingomonas
wittichii RW1]
Length = 974
Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 61/314 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A L I + TL R +L G ++ + ++ ED F++
Sbjct: 650 IEVRGPDAGKLLDFIYANTMSTLKLGKVRYGLMLNELGVVIDDGVCVRLGEDHFLVGASS 709
Query: 72 SKRDSLI----DKLLFYKLRSNVIIEIQPINGVVLSWNQ-----------------EHTF 110
+ D + + L + +V++ + V++ F
Sbjct: 710 AGADRIAAWLEEWLQCEFVDHDVLVAPLTTSWSVVTLTGPRARDLLAEAGTSFPLGAEAF 769
Query: 111 SNSSF---------------------------IDERFSIADVLLHRTWGHNEKIASDIKT 143
+ SF R + +L R G I
Sbjct: 770 PHMSFQAGTVAGIEARVMRVSYTGETSYEINVPTGRTAELWDVLMRLGGRYGLTPIGIDA 829
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
++ LR+ G + D T P + D + KG + G+ + H++ R +
Sbjct: 830 WNLLRLEKGYLHIGAD-TDGTTTPLNIGWD---HVLRRKGDFAGKRSLMLALHQDPARLQ 885
Query: 204 PMIITGTDDLP-PSGSPILTDD----IEIGTLGVVVG----KKALAIARIDKVDHAIKKG 254
+ + P P G+ ++ + G + V + +A+A + + +
Sbjct: 886 LVGLRAEGMEPLPIGAHLVRGEGADRASDGFVTSSVHSPVFGRGVALALVHGGTGRVGET 945
Query: 255 MALTVHGVRVKASF 268
+AL G R+ A+
Sbjct: 946 VALEHGGRRLTATI 959
>gi|91785717|ref|YP_560923.1| glycine cleavage system aminomethyltransferase T [Burkholderia
xenovorans LB400]
gi|91689671|gb|ABE32871.1| Glycine cleavage system T protein [Burkholderia xenovorans LB400]
Length = 384
Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 64 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPNGGVIDDLIVYYFGEDHF 123
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 124 RVVVNAGTAD 133
>gi|300934213|ref|ZP_07149469.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
resistens DSM 45100]
Length = 392
Score = 42.9 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V GK A +L + + + A+ S I T G I+ + ++ ED F
Sbjct: 54 LSHMGEVRVKGKDAGAYLDYAFISKMSAVKIGKAKYSMICTESGGIIDDLITYRLGEDEF 113
Query: 66 ILEIDRSKRDSLID 79
++ + +++
Sbjct: 114 LVVPNAGNVANVVS 127
>gi|254503405|ref|ZP_05115556.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222439476|gb|EEE46155.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 811
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 54/267 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G A +L ++T + + + +L GK++ F I + ++TF + S
Sbjct: 495 KITGAGAEDYLSYLMTNTMPKV--GRIVLTPMLNEAGKLIGDFTIVRASDETFYM-FGSS 551
Query: 73 KRDS-----LIDKL------------------------LFYKLRSNVIIEIQPINGVVLS 103
+ + L L + V + +
Sbjct: 552 QAEVYHMRWFEKHLPDDGSVAIEAINLSLVGLSIAGPRARDVL-AKVAGDDVSNDAFRFM 610
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY----------HE 146
+E +N+ R S L + W E + +
Sbjct: 611 DFREMDVANAPCKVNRISYTGDLGYEIWMTPEYERQVYTALMEAGAEFGIQNFGMRALLA 670
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-M 205
+R+ +F P P +A + + L K +IGQE R R R
Sbjct: 671 MRLEKNFGTWFREFRP-IYGPFEADLGRF--VKLGKNNFIGQEAARREFEDGPKRSRVSF 727
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGV 232
++ D PI + IG +
Sbjct: 728 VVDALDADVMGDEPIWHGNDVIGWITS 754
>gi|209515757|ref|ZP_03264620.1| glycine cleavage system T protein [Burkholderia sp. H160]
gi|209503784|gb|EEA03777.1| glycine cleavage system T protein [Burkholderia sp. H160]
Length = 372
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVTKLQTPGRALYSCMLNPNGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|15921469|ref|NP_377138.1| glycine cleavage system aminomethyltransferase T [Sulfolobus
tokodaii str. 7]
gi|15622255|dbj|BAB66247.1| 346aa long hypothetical aminomethyltransferase [Sulfolobus tokodaii
str. 7]
Length = 346
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 87/269 (32%), Gaps = 56/269 (20%)
Query: 6 LSNQSFIKVCGK-SAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEED 63
LS+ +K+ GK L I D+ Y G +A L +G + + K+ +
Sbjct: 48 LSHMGRLKITGKIDEFDLL---IAKDIKKASYNTMIGPTAFLNDKGGFIDDVMTYKLSDT 104
Query: 64 TFILEIDRSKRDSLIDKLL------------FYKLRSNVII------------EIQPING 99
F++ + R+ +I+ + Y + + I ++QP+
Sbjct: 105 EFLIVTNAINREKVINWIKSNSSLEVEDLTFKYAM---IAIQGRNVWNYIEKTDLQPLEF 161
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HE 146
+ F+ R WG E I+ I+
Sbjct: 162 KI----NTKFLGEEVFLISRSGWTGEDGVEVWGSPEVISKIIQRLISVGVKPSGLICRDS 217
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR--P 204
+R G V D I P +A + SL K +IG+E + + + R
Sbjct: 218 IRQEMGFVLYGEDI-DENITPVEARYWV---FSLDKQ-FIGREKIVEQLKNGVEKIRVGL 272
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV 233
+ G +P + I D EIG +
Sbjct: 273 KLKKGERSIPRKDNKIKILDNEIGYVTSS 301
>gi|148545602|ref|YP_001265704.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida
F1]
gi|148509660|gb|ABQ76520.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida F1]
Length = 1004
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 730 MTTTTGGAARVLQWMELY 747
>gi|294341178|emb|CAZ89579.1| putative Aminomethyltransferase (Glycine cleavage system T protein)
GcvT [Thiomonas sp. 3As]
Length = 386
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 60/294 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE----- 61
S+ + + G A L+ ++ D+ LP R + QG +L ++ +
Sbjct: 58 SHMGQVALRGDDAAAALETLVPMDIQGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGA 117
Query: 62 EDTFILEI-------DRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
L + D + +L D+ + ++ +Q V ++
Sbjct: 118 GQELFLIVNAACKVQDVALLQTLSDRCEVVPMPEQALLALQGPQAVQTFARLVPEAADLV 177
Query: 115 FIDERF-------------------------------SIADVLLHRTWGHNEKIASDIKT 143
F+ R+ + A L E +
Sbjct: 178 FMTGRWMDVPVEGGAIRIFATRSGYTGEDGLEISVSAADAQRLARLLLSLPEVEPIGLGA 237
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVV-SRIQH 196
LR+ G+ D ST P +A + +G G + G EV+ ++I
Sbjct: 238 RDTLRLEAGLCLYGHDIDTSTT-PVEAGLTWAIQKVRRHG-GARAGGFPGAEVILAQIDQ 295
Query: 197 RNIIRKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGVVV------GKKALAIA 242
N+ +R + + G D P G+ +L D G + G A+A
Sbjct: 296 PNLAPRRRIGLIGLDRTPVREGTELLAADGRLAGRVSSGSFAPSAGGPVAMAYV 349
>gi|332672212|ref|YP_004455220.1| glycine cleavage system T protein [Cellulomonas fimi ATCC 484]
gi|332341250|gb|AEE47833.1| glycine cleavage system T protein [Cellulomonas fimi ATCC 484]
Length = 403
Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 54/142 (38%), Gaps = 8/142 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++V G A L A + + L AR + I+ G +L ++ ++ + F
Sbjct: 74 LSHMGELEVTGPQAGSALDAALVGHLSALAEGRARYTMIVDEHGGVLDDLVVYRLAPERF 133
Query: 66 ILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
++ + S RD+L ++L + + ++ + +++ + E
Sbjct: 134 VVVANASNVAVVRDALRERLTGF----DAALDDASLRTALVAVQGPRAEEIVASATEPAD 189
Query: 122 IADVLLHRTWGHNEKIASDIKT 143
+ V + + + +
Sbjct: 190 VDAVRALKYYAAVPATVAGLSA 211
>gi|313496689|gb|ADR58055.1| SoxA_2 [Pseudomonas putida BIRD-1]
Length = 1004
Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 730 MTTTTGGAARVLQWMELY 747
>gi|111019922|ref|YP_702894.1| glycine cleavage system aminomethyltransferase T [Rhodococcus
jostii RHA1]
gi|110819452|gb|ABG94736.1| aminomethyltransferase [Rhodococcus jostii RHA1]
Length = 371
Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G + L + ++ + A+ S + G ++ ++ ++ + F
Sbjct: 53 LSHMGEIAVTGPESGAVLDYALAGELSKIGVGRAKYSLLCNAGGGVIDDLVVYRLANEHF 112
Query: 66 ILEIDRSKRDSLIDKL 81
++ + + ++ +L
Sbjct: 113 LVVANAANAPTVHREL 128
>gi|26987067|ref|NP_742492.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida KT2440]
gi|24981690|gb|AAN65956.1|AE016223_10 sarcosine oxidase, alpha subunit [Pseudomonas putida KT2440]
Length = 1004
Score = 42.9 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 730 MTTTTGGAARVLQWMELY 747
>gi|325273743|ref|ZP_08139941.1| sarcosine oxidase, subunit alpha [Pseudomonas sp. TJI-51]
gi|324101128|gb|EGB98776.1| sarcosine oxidase, subunit alpha [Pseudomonas sp. TJI-51]
Length = 904
Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 730 MTTTTGGAARVLQWMELY 747
>gi|187925849|ref|YP_001897491.1| glycine cleavage system aminomethyltransferase T [Burkholderia
phytofirmans PsJN]
gi|187717043|gb|ACD18267.1| glycine cleavage system T protein [Burkholderia phytofirmans PsJN]
Length = 372
Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPDGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ D I + + G+ ++ + + + + A
Sbjct: 112 RVVVNAGTADKDIAWFG--------QLNAEGSFGLTIT-----PRRDYAIVAVQGPNARE 158
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ +T +K ++ RI
Sbjct: 159 KVWQTVPAARAATEALKPFNAARIE 183
>gi|300022070|ref|YP_003754681.1| glycine cleavage system protein T [Hyphomicrobium denitrificans
ATCC 51888]
gi|299523891|gb|ADJ22360.1| glycine cleavage T protein (aminomethyl transferase)
[Hyphomicrobium denitrificans ATCC 51888]
Length = 373
Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 58/306 (18%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILT------------------------ 46
+ V G A+ FL ++T+D+ + S I+
Sbjct: 61 MVNVEGPDALAFLNHLLTSDISKAKRGDSHISNIVNEDGALIDDVLVYVDGDGKYRVSHG 120
Query: 47 ----------PQGKILLYFLISKIEEDTFI-LEIDRSKRDSLIDKLLF------YKLRSN 89
+G+ +++ ++ + L+ +S + L Y
Sbjct: 121 GGSFEEAAAAAKGR--FNVTVARDDDVHILSLQGPKSL-EVLAPHTPMKLAELPYFHHEK 177
Query: 90 VIIEIQPINGVVLSWNQEHTFS-NSSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHEL 147
+ +P+ ++ E + S D F +L G ++ + +
Sbjct: 178 TTLFGRPVEIARGGYSAERGYEVFCSAKDAEFMWDSIL---AAGKDQGVTPISWSCLDII 234
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ G++ D P + D + L+K +IG++ + + R +
Sbjct: 235 RVEGGLLFFPFDMTHGDTTPWEVRADWT--VDLSKPDFIGKK--ALTAKKGKERSLITGL 290
Query: 208 -TGTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGV 262
+ S I +D E+G + + +LA+A+I + + + +G
Sbjct: 291 DVLHSEAIAPLSKIFSDGKEVGIVTSTTYSQHLMKSLAMAQISPAFTKLGTELTIRDNGR 350
Query: 263 RVKASF 268
A+
Sbjct: 351 DFTATV 356
>gi|91762961|ref|ZP_01264926.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718763|gb|EAS85413.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
Length = 998
Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 14/181 (7%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G A L + T L LP AR +L G ++ ++I E+ + +
Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
++ +++ L +Y + + +N V+S ++ + + R LL + +
Sbjct: 730 AQAANVLSHLEYY-----LQLVWPELNVNVVSTTEQWAGAAIAGPKSRD-----LLQKLF 779
Query: 132 GHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQ 188
+ + + Y E + G+ S ++ ++ NG K +GQ
Sbjct: 780 PNIDASNEGLPFMGYLEADL-FGVHARIFRISFSGELAYEVNVESDNGNFMWEKIMEVGQ 838
Query: 189 E 189
E
Sbjct: 839 E 839
>gi|71083970|ref|YP_266690.1| sarcosine oxidase subunit alpha [Candidatus Pelagibacter ubique
HTCC1062]
gi|71063083|gb|AAZ22086.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1062]
Length = 998
Score = 42.9 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 14/181 (7%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G A L + T L LP AR +L G ++ ++I E+ + +
Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
++ +++ L +Y + + +N V+S ++ + + R LL + +
Sbjct: 730 AQAANVLSHLEYY-----LQLVWPELNVNVVSTTEQWAGAAIAGPKSRD-----LLQKLF 779
Query: 132 GHNEKIASDIKT--YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLTKGCYIGQ 188
+ + + Y E + G+ S ++ ++ NG K +GQ
Sbjct: 780 PNIDASNEGLPFMGYLEADL-FGVHARIFRISFSGELAYEVNVESDNGNFMWEKIMEVGQ 838
Query: 189 E 189
E
Sbjct: 839 E 839
>gi|260829619|ref|XP_002609759.1| hypothetical protein BRAFLDRAFT_78592 [Branchiostoma floridae]
gi|229295121|gb|EEN65769.1| hypothetical protein BRAFLDRAFT_78592 [Branchiostoma floridae]
Length = 828
Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 82/298 (27%), Gaps = 64/298 (21%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
+ L+ +V G A L + V LP R S +LT G + ++++ +
Sbjct: 507 IDLTPFGKFEVSGPDAASLLDYLF---VNELPQVGRTRISHMLTTSGGVYAEMTVTRLGQ 563
Query: 63 DTFIL-----------------------EIDRSKRDSLIDKL------LFYKLRSNVIIE 93
D F L ++ + + L L + +
Sbjct: 564 DHFFLVTGSGSELHDLRWIENHVWKGGYDVTIANVTDDMGVLGIAGPRSRDVL-AKLTSG 622
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA--------------- 138
G Q+ + R S L + E A
Sbjct: 623 DLSEEGFKFLSCQQLSLGGVRVRAVRISYTGELGWELYHAREDTARLYEALMSAGQEFGL 682
Query: 139 SDIKTYHE--LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQ 195
D TY LR+ G + P +A +D I + K +IG++ + ++Q
Sbjct: 683 GDFGTYAMGSLRLEKGFRGWGAEMTVDN-NPLEAGLDSF--IKMNKPADFIGKQALQQLQ 739
Query: 196 HRNIIRKRPMI---ITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARI 244
+ RK + + I +G ALA +
Sbjct: 740 QEGLTRKLVCLTVEVEENGPDAEGNETIWHQGKVVGFTTSGAYGYQAQKSLALAYVPL 797
>gi|118588889|ref|ZP_01546296.1| sarcosine oxidase, alpha subunit [Stappia aggregata IAM 12614]
gi|118438218|gb|EAV44852.1| sarcosine oxidase, alpha subunit [Stappia aggregata IAM 12614]
Length = 1000
Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL+ + T L R +L G I +I ++ ED F
Sbjct: 667 STLGKIEVVGPDAAEFLERMYTNPWKKLAPGRCRYGLLLNDAGFITDDGVIGRLAEDRFH 726
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ S+ + Y
Sbjct: 727 VTTTTGGAPSVFATMEDY 744
>gi|167031366|ref|YP_001666597.1| sarcosine oxidase subunit alpha family protein [Pseudomonas putida
GB-1]
gi|166857854|gb|ABY96261.1| sarcosine oxidase, alpha subunit family [Pseudomonas putida GB-1]
Length = 1004
Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I T L AR + G + + + + ++ FI
Sbjct: 670 STLGKIDIQGPDAREFLNRIYTNTWTKLDVGKARYGLMCKEDGMVFDDGVTACVGDNHFI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 730 MTTTTGGAARVLQWMELY 747
>gi|115460656|ref|NP_001053928.1| Os04g0623800 [Oryza sativa Japonica Group]
gi|38344172|emb|CAE03503.2| OSJNBa0053K19.11 [Oryza sativa Japonica Group]
gi|113565499|dbj|BAF15842.1| Os04g0623800 [Oryza sativa Japonica Group]
gi|116309756|emb|CAH66799.1| H0215F08.10 [Oryza sativa Indica Group]
Length = 408
Score = 42.9 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 56/281 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ + + G+ AIPFL++++ ADV L + +G + +++K+
Sbjct: 80 SLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVT 139
Query: 62 EDTFILEIDRSKRDSLIDKL---------------------------------------- 81
+ L ++ RD + +
Sbjct: 140 DQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKWHVHDERSLLALQGPLAAPTLQLLT 199
Query: 82 -----LFYKLRSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGH 133
Y S+ I+I + + E F S + +A LL ++ G
Sbjct: 200 KEDLSKMY--FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGK 257
Query: 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVS 192
+ LR+ G+ D I P +A + G +G ++G +V+
Sbjct: 258 VRLTG--LGARDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRKAEGGFLGADVIL 314
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPILTD-DIEIGTLGV 232
+ +R +++ P S S I+++ IG +
Sbjct: 315 KQLQEGPKIRRVGLLS-QGPPPRSHSEIVSNSGENIGEVTS 354
>gi|283851944|ref|ZP_06369220.1| glycine cleavage system T protein [Desulfovibrio sp. FW1012B]
gi|283572668|gb|EFC20652.1| glycine cleavage system T protein [Desulfovibrio sp. FW1012B]
Length = 362
Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 84/297 (28%), Gaps = 59/297 (19%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ G+ A L +T D+ TL R +L G ++ +I + D ++L ++ S+
Sbjct: 59 LSGQGAAKALSTALTHDLDTLAPGKCRYGFLLNEAGGVIDDLIIYCLGPDHYMLVVNGSR 118
Query: 74 RD--------------------------SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107
L L F LR V + + ++ +
Sbjct: 119 IAMDFETIKSRLPAGLSLVDASPDTAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFAFTE- 177
Query: 108 HTFSNSSFIDERFSIADVLLHRTW--------------GHNEKIASDIKTYHELRINHGI 153
F + R L + + + + LR+ G
Sbjct: 178 --FQGVKLMVSRTGYTGELGYELFLPAAAAEALWEALVADPRVAPAGLGARDTLRLEMGY 235
Query: 154 VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT--GTD 211
D P +A L Y+G+ + +R++ + + G
Sbjct: 236 PLYGQDL-DEEHTPAEAGYGWLLTSPAD---YVGKGKAA------TVRQKLLALEIPGRR 285
Query: 212 DLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+ + +G + +L A V A A RV+A+
Sbjct: 286 SARHGDAVLDKAGKTVGVVTSASFAPSLGHA----VALAYVDAPAAEAKEFRVQAAR 338
>gi|254250940|ref|ZP_04944258.1| Glycine cleavage system T protein [Burkholderia dolosa AUO158]
gi|124893549|gb|EAY67429.1| Glycine cleavage system T protein [Burkholderia dolosa AUO158]
Length = 377
Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 57 SHMCVVDFTGSRVRAFFERAIANNVGKLRTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 116
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 117 RVVVNAGTAD 126
>gi|325300486|ref|YP_004260403.1| Aminomethyltransferase [Bacteroides salanitronis DSM 18170]
gi|324320039|gb|ADY37930.1| Aminomethyltransferase [Bacteroides salanitronis DSM 18170]
Length = 361
Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 27/62 (43%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ F+Q + + + L + + G I+ L+ E + ++L ++ +
Sbjct: 56 VKGPHALDFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYGYEPEKYLLVVNAAN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|311249750|ref|XP_003123790.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial-like [Sus
scrofa]
Length = 823
Score = 42.9 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 67/290 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS V G+ +I L + + + S +LTP+G++ +S
Sbjct: 532 IDLSPFGKFTVKGQDSIRLLDHLFANVIPQV--GCTNISHMLTPKGRVYAELTVSHQSPG 589
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRS----------NVII----EIQPINGVVLSWNQ--- 106
F+L + LR NV I ++ + GV +
Sbjct: 590 EFLLITGSGS--------ELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVL 641
Query: 107 ----EHTFSNSSF---------------IDERFSIADVLLHRTWGHNEKIAS-------- 139
S+ +F R S L + E A+
Sbjct: 642 QKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNA 701
Query: 140 -------DIKTY--HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQE 189
+ TY + LR+ ++ T P +A ++ + L K +IG++
Sbjct: 702 GQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDT-NPLEAGLEYF--VKLNKPADFIGKQ 758
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
+ +I+ + + R+ + TDD+ P G+ + D ++ V +G+K L
Sbjct: 759 ALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKLAASYVSIGEKTL 808
>gi|163734627|ref|ZP_02142066.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Roseobacter litoralis Och 149]
gi|161392120|gb|EDQ16450.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Roseobacter litoralis Och 149]
Length = 506
Score = 42.9 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 68/313 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q I T ++ TL +A+ G ++ + ++ +D F
Sbjct: 175 LSPLRKFEITGPDAEALCQYIFTRNMKTLAVGGVVYTAMCYEHGGMIDDGTVFRLGKDNF 234
Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVL------------SWNQE 107
+ + +KL V+I ++ V + W
Sbjct: 235 RWIGGNDYGGEWIREQAEKLGL-----KVLIRSSTDQLHNVAVQGPESRDLLRKLVWTAP 289
Query: 108 H------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------- 139
H S + F+ R L + H + A
Sbjct: 290 HNPEFDQLGWFRFSPARLNDESGTPFVISRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQ 349
Query: 140 -------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
++ +RI G++ DF T P +A + + +IG++ +
Sbjct: 350 AHGIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGVGFTVPLKSKTDDFIGRDALL 408
Query: 193 RIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKV 247
R + ++ + + ++ G + ++G + + K +A+AR+D V
Sbjct: 409 R--RKENPMRKLVGLEIDSNVDVGHGDCLHVGRAQVGEVTSSMRSPLLGKNIALARVD-V 465
Query: 248 DHAIKKGMALTVH 260
HA G L V
Sbjct: 466 AHA-DVGTVLEVG 477
>gi|260459631|ref|ZP_05807885.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
gi|259034433|gb|EEW35690.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
Length = 1007
Score = 42.9 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 17/211 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V +S I V G A FL + T TL AR +L G ++ E
Sbjct: 672 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDGFAFDDGTTWRLGEQ 731
Query: 64 TFILEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQ-----EHTFSN 112
F++ + ++ L ++ +L+ +V G + + +
Sbjct: 732 DFLMTTTTANAGKVMQHLEYFLDMVWPELKVHVTSVTDEWAGAAIGGPKARQILAACVTG 791
Query: 113 SSFIDERFSIADVLLHRTWGHNEKIAS-DIKTYHELRINHGIVDPNT--DFLPSTIFPH- 168
++ + ++ G I + G + L P
Sbjct: 792 TAVDNATLPFMGIVRGEVAGVPVMICRLSFSGEMAFEVYSGAGHGTHVWEALIEAGKPFG 851
Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRIQHR 197
++ L + + KG G E+ R R
Sbjct: 852 LVTYGLEALGTMRIEKGHVTGAEIDGRTTAR 882
>gi|254456394|ref|ZP_05069823.1| sarcosine oxidase alpha subunit [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083396|gb|EDZ60822.1| sarcosine oxidase alpha subunit [Candidatus Pelagibacter sp.
HTCC7211]
Length = 998
Score = 42.9 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G A L + T L LP AR +L G ++ ++I E+ + +
Sbjct: 670 IDIKGPDAAELLNRVYTNAWLKLPVGKARYGVMLREDGIVMDDGTTTRISENHYHMTTTT 729
Query: 72 SKRDSLIDKLLFY 84
++ +++ L +Y
Sbjct: 730 AQAANVLSHLEYY 742
>gi|195471950|ref|XP_002088265.1| GE18481 [Drosophila yakuba]
gi|194174366|gb|EDW87977.1| GE18481 [Drosophila yakuba]
Length = 405
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 81 RVFGKDAAACLESVCTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 141 MKEQDMGIMSAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
+SF+ I +V + R E + +
Sbjct: 199 QLYFMTSFVTTLAGIPNVRITRCGYTGEDGVEISVESSQVQKLTESILESGVLKLAGLGA 258
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D S P +A + L +S + + G +V+ +
Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VSKRRRTTRDFPGADVILGQLKEGVS 315
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + GT P SG IL+ ++G +
Sbjct: 316 RRRVGFQMLGTKPPPARSGVAILSQGQQVGQVTSGC 351
>gi|194862154|ref|XP_001969934.1| GG23666 [Drosophila erecta]
gi|190661801|gb|EDV58993.1| GG23666 [Drosophila erecta]
Length = 405
Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK A L++I TAD+L P + G IL +++K+ E + + +
Sbjct: 81 RVFGKDAAACLESICTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 141 MKEQDMGIMSAAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEAALD 198
Query: 113 -----SSFIDERFSIADVLLHR-------------TWGHNEKIASD-----------IKT 143
SS + I +V + R G +++ +
Sbjct: 199 QLYFMSSLVTSFAGIPNVRITRCGYTGEDGVEISVESGQAQRLTESLLESGVLKLAGLGA 258
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D + P +A + L +S + + G +V+ +
Sbjct: 259 RDSLRLEAGLCLYGSDI-DAKTTPVEAALAWL--VSKRRRTTRDFPGADVILGQLKEGVS 315
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I++ ++G +
Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIISQGQQVGQVTSGC 351
>gi|294896047|ref|XP_002775377.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239881569|gb|EER07193.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 1131
Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ ++V GK + F++++ D+ L R + I TPQ I+ +I E
Sbjct: 71 SLFDVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-E 129
Query: 62 EDTFILEIDRSKRDSLIDKL 81
D + ++ S + + +
Sbjct: 130 GDHLYVVLNASNTEKDMKHI 149
>gi|91774794|ref|YP_544550.1| aminomethyltransferase [Methylobacillus flagellatus KT]
gi|91708781|gb|ABE48709.1| aminomethyltransferase [Methylobacillus flagellatus KT]
Length = 372
Score = 42.5 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 62/302 (20%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-- 68
+ V G A + ++ D+ L + +A + G I ++ + ++F +
Sbjct: 57 IVNVTGPDAERAVDRLVARDITRLKPGHSLLAAEVNEAGAICDDIMVIRDAANSFRISHG 116
Query: 69 --------------IDRSKRDSLIDKL-------LFYKLRSNVIIEIQPINGVVLSWNQE 107
+D L + L+ + ++ + +++
Sbjct: 117 SGATKQQLAKAAEGLDVKVEPDLDAHILSLQGPKSLSVLK---PLLAFDLDELAYFQHKQ 173
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEK-----------------IASDIKTYHELRIN 150
+ R + L + + E I + + RI
Sbjct: 174 TQLFGKTVYIARGGYSGELGYEIYCRAEDAVLLWDEILKAGEPFGVIPASWNSLELTRIE 233
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIR-KRPMIIT 208
++ + + P + M G+ + K G YIG+ V + R R ++ +I
Sbjct: 234 AALLFFPFEMIEGDTTPWEVNMAW--GVDIDKPGDYIGKAAV--LASRGKERFRQVGLIC 289
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKK----ALAIARIDKVDHAIKKGMALTVHGVRV 264
+G+ I + ++G + + +LA+A I AL V+G V
Sbjct: 290 RAATAVEAGAAIYHEGRQVGVVTSASYSRYLMQSLALAHI---------APALAVNGTAV 340
Query: 265 KA 266
+
Sbjct: 341 EV 342
>gi|312077311|ref|XP_003141248.1| hypothetical protein LOAG_05663 [Loa loa]
gi|307763588|gb|EFO22822.1| hypothetical protein LOAG_05663 [Loa loa]
Length = 868
Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 94/283 (33%), Gaps = 59/283 (20%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62
+ LS + I+V GK + L ++ + L +LT +G I + ++
Sbjct: 497 IDLSWRGKIEVRGKDSEKLLSYVLANEPPQL--GKLSSGLMLTKKGNIFGSLDLFHHDQY 554
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------------Q 106
FIL D + ++ L + +EI I+ + S
Sbjct: 555 RSEFILITDPERESRELNWLKRAAIEIEANVEISGISEYLASLAVVGPKSREVLKELTKS 614
Query: 107 EHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI------------------------- 141
+ F S+ R A V+ RT +++ ++
Sbjct: 615 DLDFEQSAARLMRLGSAPVIAVRTTAATGQLSYELYHSRGDTLALYNSLMEVGRNYGIVN 674
Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T + +RI HG + +T P++ + + + L K +IG+ + +
Sbjct: 675 FGQSTLNMMRIEHGYKIWGRELTLNT-NPYECGL--SHMVDLNKENFIGRTSCMELSQKQ 731
Query: 199 IIRKRPMII-------TGTDDLPPSGSPILTDDIE--IGTLGV 232
RK+ ++I G +P I + E +G +
Sbjct: 732 WNRKQVLLICEPLTEPQGWRMIPKRMEVIRKEGSEDRVGQITS 774
>gi|225024534|ref|ZP_03713726.1| hypothetical protein EIKCOROL_01409 [Eikenella corrodens ATCC
23834]
gi|224942685|gb|EEG23894.1| hypothetical protein EIKCOROL_01409 [Eikenella corrodens ATCC
23834]
Length = 389
Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G+ A F + ++ DV L + A SA+L QG ++ ++ + E
Sbjct: 75 SHMLVTDVTGEKAKAFFRKLLANDVAKLGFVGKALYSAMLNDQGGVIDDLIVYRGNE 131
>gi|163758641|ref|ZP_02165728.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
gi|162283931|gb|EDQ34215.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
Length = 815
Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 85/318 (26%), Gaps = 59/318 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S +V G A +L +IT V QG+I+ I + ED F
Sbjct: 496 LPGFSRFRVEGTGARDWLSTLITGVVPK--PGRIGLGYFADAQGRIVTEMSIMAMSEDFF 553
Query: 66 ILEIDRSKR----DSLIDKLLFYKLRSNVI----------------------IEIQPING 99
L + + + L+ L L + I +
Sbjct: 554 FLITAATAQWHDYEWLLKHL-PDGLNIKIEDVTEQFSCHILTGPKSREILSGITDADLGK 612
Query: 100 VVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK----------------- 142
L+ + R S A L E +
Sbjct: 613 PWLTHQSAQVAGIWCQLI-RVSFAGELGWEIHSKVEDTPAVFDAVMAAGKPHGLKPFGMF 671
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
+ LR+ D +D + K ++G++ + + + + ++
Sbjct: 672 ALNSLRLEKSYRAWKGDLSTDYTV-LQGGLDRF--VKWDKPEFVGKQALEVERQQGVSKR 728
Query: 203 RPMIITGTDDLPPS-------GSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGM 255
++ D GS ++ + G + AL + R D K +
Sbjct: 729 FVTLVIEAGDCDAPYMSTLWDGSEVVGETTSGGWGHRIDKSIALGMVRHDLTAPGTKLEV 788
Query: 256 ALTVH--GVRVKASFPHW 271
+ V+A P W
Sbjct: 789 EIFGERFAATVQADQPLW 806
>gi|50303773|ref|XP_451833.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640965|emb|CAH02226.1| KLLA0B06754p [Kluyveromyces lactis]
Length = 393
Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G +I FL + D L K S +L G I+ LI+KI ++ F + +
Sbjct: 73 TLKGPKSIEFLHKVTPTDFKALEPKNGTLSVLLNENGGIVDDTLITKINDEEFYIVTNAG 132
Query: 73 KRDSLIDKLL 82
+ + L
Sbjct: 133 CIERDTEFLK 142
>gi|146308477|ref|YP_001188942.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
mendocina ymp]
gi|145576678|gb|ABP86210.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
mendocina ymp]
Length = 781
Score = 42.5 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS +V G A L +T DV L SA+ G +L + ++ D F
Sbjct: 450 LSALRKFEVLGPDAEALLNYCLTRDVRKLAVGQVVYSAMCYEHGGMLDDGTLLRLGPDAF 509
>gi|330890959|gb|EGH23620.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. mori str. 301020]
Length = 360
Score = 42.5 bits (99), Expect = 0.061, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L +G ++ ++ E
Sbjct: 50 SHMNVIDVVGRQARTWLRYLLANDVEKLKTPGRALYSAMLDERGGVIDDMIVYLTPEGYR 109
Query: 66 I 66
+
Sbjct: 110 L 110
>gi|326388301|ref|ZP_08209904.1| sarcosine oxidase, subunit alpha [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207467|gb|EGD58281.1| sarcosine oxidase, subunit alpha [Novosphingobium nitrogenifigens
DSM 19370]
Length = 954
Score = 42.5 bits (99), Expect = 0.061, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 88/298 (29%), Gaps = 65/298 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL + T +L R +L G I+ + ++I ED F
Sbjct: 621 STLGKIEVVGPDAAEFLNRMYTNPWKSLQPGRCRYGLLLREDGFIMDDGVSARIAEDRFH 680
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQ----PINGVVLSWNQ---------------- 106
L ++ + Y +++ + V++
Sbjct: 681 LTTTTGGAPRVLSMMEDYLQTEWADLDVWLTSTTEHWAVIALQGPRARDVIAPLVEGIDL 740
Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE------------ 146
F + + + + L R E + K +
Sbjct: 741 SPKAFPHMAVREGTIAGVPTRLFRVSFTGELGFEINVPASEGQKVWDAIFASGKQYGITP 800
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G + D T+ P+D +D + K ++G+ ++R
Sbjct: 801 YGTEAMHVLRAEKGYIIVGQD-TDGTMTPYDMGLDW--AVGKKKADFVGKRSLARPDIVA 857
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVV------GKKALAIA 242
RK+ + + D + G+ I+ E IG + ALA+
Sbjct: 858 KGRKQFVGLLTEDPYEVLEEGAQIVVHPDEPVPMTMIGHVTSSYRSTTLGRSIALAVL 915
>gi|190895657|ref|YP_001985949.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652]
gi|190699602|gb|ACE93686.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652]
Length = 981
Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 96/302 (31%), Gaps = 63/302 (20%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL I L AR +L G I S++ +
Sbjct: 642 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRLSD 701
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
+ F + + ++ L F +++ P + +LS +
Sbjct: 702 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILSEIVD 761
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160
S+++F + R G +I+ + +EL + G + D
Sbjct: 762 EDLSDAAFPFMSARKVSLFAGRLEGRLFRISFSGELAYELAVPAGYGESVADAIMAAGEK 821
Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ T+ P D + +S TK +IG+ +++R
Sbjct: 822 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKAMLAREG 879
Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241
++ R R + + + +GS IL + G + K LA+
Sbjct: 880 LQDPERPRLVGVKPLNPASSFRTGSHILAEGAAATLENDQGYVTSSAFSPTLGHKIGLAL 939
Query: 242 AR 243
R
Sbjct: 940 VR 941
>gi|116332181|ref|YP_801899.1| glycine cleavage system aminomethyltransferase T [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|122280091|sp|Q04PM9|GCST_LEPBJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|116125870|gb|ABJ77141.1| Aminomethyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 371
Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 7 SNQSFIKVCGKS--AIPFLQAIITAD-VLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ I + G+ + FL+ ++T + V +L + +AIL G ++ I K +
Sbjct: 52 SHMGEIFITGEPKIVLDFLE-LVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSVE 110
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+++ + S +++ LL Y S V + Q N ++
Sbjct: 111 KYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWHQIALQGPKA 156
>gi|226946735|ref|YP_002801808.1| glycine cleavage system aminomethyltransferase T [Azotobacter
vinelandii DJ]
gi|226721662|gb|ACO80833.1| Glycine cleavage system T protein [Azotobacter vinelandii DJ]
Length = 360
Score = 42.5 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + V G A +L+ ++ DV L A S +L +G ++ ++ + + +
Sbjct: 50 SHMTVVDVLGADAGIWLRRLLANDVAHLKSPGKALYSVMLNERGGVIDDLIVY-LADFGY 108
Query: 66 ILEIDRSKRDSLIDKLL 82
L ++ + R+ +D +
Sbjct: 109 RLVLNAATRERDLDWIR 125
>gi|198275602|ref|ZP_03208133.1| hypothetical protein BACPLE_01767 [Bacteroides plebeius DSM 17135]
gi|198271231|gb|EDY95501.1| hypothetical protein BACPLE_01767 [Bacteroides plebeius DSM 17135]
Length = 361
Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ F+Q + + + L + + G I+ L+ E D ++L ++ +
Sbjct: 56 VKGPHALEFIQEVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYAYEPDKYMLVVNAAN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|107104520|ref|ZP_01368438.1| hypothetical protein PaerPA_01005598 [Pseudomonas aeruginosa PACS2]
Length = 1005
Score = 42.5 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 730 MTTTTGGAARVLEWLELY 747
>gi|152985384|ref|YP_001351517.1| sarcosine oxidase subunit alpha [Pseudomonas aeruginosa PA7]
gi|150960542|gb|ABR82567.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PA7]
Length = 1005
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 730 MTTTTGGAARVLEWLELY 747
>gi|218894521|ref|YP_002443391.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa LESB58]
gi|254242970|ref|ZP_04936292.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 2192]
gi|126196348|gb|EAZ60411.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 2192]
gi|218774750|emb|CAW30567.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa LESB58]
Length = 1005
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 730 MTTTTGGAARVLEWLELY 747
>gi|15600611|ref|NP_254105.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAO1]
gi|116053566|ref|YP_793893.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa UCBPP-PA14]
gi|9951745|gb|AAG08803.1|AE004954_5 sarcosine oxidase alpha subunit [Pseudomonas aeruginosa PAO1]
gi|115588787|gb|ABJ14802.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa UCBPP-PA14]
Length = 1005
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 730 MTTTTGGAARVLEWLELY 747
>gi|218961326|ref|YP_001741101.1| aminomethyltransferase (Glycine cleavage system T protein)
[Candidatus Cloacamonas acidaminovorans]
gi|167729983|emb|CAO80895.1| aminomethyltransferase (Glycine cleavage system T protein)
[Candidatus Cloacamonas acidaminovorans]
Length = 463
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+ + + G + L +T + + + + +L QG + ++ ++ + +FI
Sbjct: 74 DHMTQLLFYGPDVVALLNRALTGNFTEMKVGQCKYTLLLNEQGGMQDDMILMRVSDTSFI 133
Query: 67 LEIDRSK 73
L I+
Sbjct: 134 LVINAGH 140
>gi|110667714|ref|YP_657525.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109625461|emb|CAJ51888.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
Length = 865
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
++V G A F+Q + T D+ L + + + G + +++ + + +++
Sbjct: 550 MEVAGSGAGTFIQQLCTNDMD-LDIGEVKYTLMCNEGGGVRADITVTRTDTNRYLV 604
>gi|254237897|ref|ZP_04931220.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa C3719]
gi|126169828|gb|EAZ55339.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa C3719]
Length = 1005
Score = 42.5 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 670 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 730 MTTTTGGAARVLEWLELY 747
>gi|33866955|ref|NP_898514.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
WH 8102]
gi|59797839|sp|Q7TTS1|GCST_SYNPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|33639556|emb|CAE08940.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. WH 8102]
Length = 367
Score = 42.5 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 92/303 (30%), Gaps = 50/303 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ G + LQ ++ +D+ + A + +L G I ++ E
Sbjct: 51 SHMGVLRLEGPNPKDALQQLVPSDLHRIGPGEACYTVLLNESGGIRDDLIVYDCGAVDAE 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT------FSNSSF 115
+L I+ + ++ + + + + GV+L+ + S S
Sbjct: 111 RGALVLVINAACAEADTAWIRDQMEPAGLTVSDLKAGGVLLALQGPQSIPLLEELSGESL 170
Query: 116 ID-ERF--------------------------------SIADVLLHRTWGHNEKIASDIK 142
D RF + L + +
Sbjct: 171 SDLPRFGHRTLSLKDIAHPVFTGRTGYTGEDGAELLLTAADGQKLWQILLDRGVSPCGLG 230
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ + D + P +A + L + + ++G++ + + ++
Sbjct: 231 ARDTLRLEAAMHLYGMDM-NAETTPFEAGLGWLVHLEMPVD-FVGRQALEQAAESGPTKR 288
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGMALT 258
+ + P+L + +G + L A+A + + +++
Sbjct: 289 LVGLKLQGRAIARHDYPVLHNGETVGVVTSGTWSPTLEEPIALAYVPTALAKLGAELSVE 348
Query: 259 VHG 261
+ G
Sbjct: 349 IRG 351
>gi|260834877|ref|XP_002612436.1| hypothetical protein BRAFLDRAFT_214317 [Branchiostoma floridae]
gi|229297813|gb|EEN68445.1| hypothetical protein BRAFLDRAFT_214317 [Branchiostoma floridae]
Length = 828
Score = 42.5 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 83/286 (29%), Gaps = 62/286 (21%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
G + +LQ + +V +P + +L G I+++ + +++ ++
Sbjct: 504 SGDEVVTYLQRLCCNEVD-VPVGTVLHTGMLNHYGGYENDCRIARLANNHYVIISPPNQL 562
Query: 75 ----DSLIDKL-------LFYKLRSNVIIEIQPING--VVLSWNQEHTFSNSSFI----- 116
L L + RS ++ + ++ S T S+ +F
Sbjct: 563 VRSWAWLTRHLPRDGSVQIKDVTRSYAVLNVLGPRARELMSSLTDVVTMSSHNFPPNVCR 622
Query: 117 ------DERFSIADV--LLHRTWGHNEKIASDIKTYHE--------------------LR 148
R + + W + Y L
Sbjct: 623 ELSIGFAPRVRAMTISHVGELGWMLYVPQEYALHLYLYIMKRGRAFGIRNVGHYVISHLC 682
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ HGI TD S++ P + + + L K +IG+ + + + +K M +
Sbjct: 683 LEHGIPSLGTDL-DSSVTPFEC--QQEHTVKLDKD-FIGRSALLEQKQEGVRQKFVMFLL 738
Query: 209 GTDDL-----PPSGSPILTDDIEIGTLGVVVGK------KALAIAR 243
DL P PI +G L + R
Sbjct: 739 DNHDLENDLWPWGREPIWEGGRVVGMTTSASYGYTLKKQICLGLVR 784
>gi|150398501|ref|YP_001328968.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
gi|150030016|gb|ABR62133.1| glycine cleavage T protein (aminomethyl transferase) [Sinorhizobium
medicae WSM419]
Length = 377
Score = 42.5 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPP 215
P D P + +D +S K + G E +R++ + + M+I
Sbjct: 248 PFADQPPGDSLW-ELGLDFT--VSPGKAGFRGAEEHARLKGKERFKIFGMLIDADGP-AD 303
Query: 216 SGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKA 266
G + +D ++G + + KK++AIAR+D VD A++ G L V G + A
Sbjct: 304 LGDEVYAEDRKVGVITCPSYSTLTKKSMAIARLD-VDKAVQ-GAKLEVRGKNLDA 356
>gi|86741818|ref|YP_482218.1| glycine cleavage system aminomethyltransferase T [Frankia sp. CcI3]
gi|86568680|gb|ABD12489.1| aminomethyltransferase [Frankia sp. CcI3]
Length = 371
Score = 42.5 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 24/61 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ ++ G A F+ A +T D+ + A+ + G ++ + ++
Sbjct: 60 SHLGKARIAGPGAAAFVNACLTNDLRRIGPGQAQYTLCCEETGGVVDDLIAYLYSDEEVF 119
Query: 67 L 67
L
Sbjct: 120 L 120
>gi|289673356|ref|ZP_06494246.1| aminomethyltransferase [Pseudomonas syringae pv. syringae FF5]
Length = 448
Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 120 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 179
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 180 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 239
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
E F V L G ++ + H LR+ +V+ F
Sbjct: 240 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 299
Query: 161 --------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ H +D+ +S +K ++G+ V ++ R +
Sbjct: 300 PFGVETQRLLRLEKGHVIISQDTDCMTHPVEIDMGWAVSRSKPFFVGRRSVDILEARPLK 359
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 360 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 419
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 420 PIRVE-DGVVVQATV 433
>gi|255264249|ref|ZP_05343591.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62]
gi|255106584|gb|EET49258.1| aminomethyl transferase family protein [Thalassiobium sp. R2A62]
Length = 370
Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 98/313 (31%), Gaps = 64/313 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A Q + ++ R + G ++ ++ K++ED + L +
Sbjct: 65 VQLQGPDAGKLAQYLTPRNLSKTKIGQGRYVLLCDHDGWVVNDPVLLKLDEDRYWLSVAD 124
Query: 72 S--------------------------------KRDSLIDKL-------LFYKLRSNVII 92
S K + ++ KL Y + +
Sbjct: 125 SDIHLWAAAIGRERGWDVQVSEPDVSPLALQGPKAEDVVAKLFGEHIREFKYFGFAQTDL 184
Query: 93 EIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT-WGHNEKIASDIKTYHELRINH 151
+ P+ W+++ F + + DVL + E + R+
Sbjct: 185 DGIPLVLARSGWSKQGGFELYL---QNSAQGDVLWDKVKEAGAEFVLGPGAPNDIERLES 241
Query: 152 GIVDPNTDFLPST--IFPHDALM----DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM 205
G++ D T P++ DL G +G+ + +I R
Sbjct: 242 GLLSYGADMRLQTHRANPYEVGFGGLVDLAGGHDF-----VGKVALEKIAQEGANRTLVG 296
Query: 206 IITGTDDLPPSGS-PILTDDIEIGTLGVVV------GKKALAIARIDKV--DHAIKKGMA 256
+I PP ++ D ++G + + + R D D A+ +A
Sbjct: 297 LIIDGHPTPPGHQVALMRDAEQVGYVSEFAFSKRLDKTIGIGLLRADLAGIDTALSITIA 356
Query: 257 LTVHGVRVKASFP 269
T+HG +A+ P
Sbjct: 357 DTIHGAH-QAAIP 368
>gi|238023951|ref|YP_002908183.1| sarcosine oxidase subunit alpha family protein [Burkholderia glumae
BGR1]
gi|237878616|gb|ACR30948.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia
glumae BGR1]
Length = 1003
Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 81/271 (29%), Gaps = 54/271 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E ++
Sbjct: 666 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYM 725
Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEIQ-PING 99
+ ++ L + K+R V+ ++ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDLKVRLSSVTDHWATFAVVGPNSRKVVQKVCRDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144
++ +E T + R S + L + E I + Y
Sbjct: 786 ANAAFPFMSYREGTVAGVKARVMRISFSGELAYEINVPANAGRAVWEAIMAAGAEYDITP 845
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D +I PHD M L S ++G+ +SR
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMSGLVAKSKD---FLGRRSLSRSDTMR 901
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTDDIEI 227
RK+ + + D G I+ D
Sbjct: 902 ENRKQFVGLLTEDPALVLEEGGQIVEPDASA 932
>gi|227488485|ref|ZP_03918801.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091563|gb|EEI26875.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 391
Score = 42.5 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A +L AD L A+ + ++ G+I+ +I +E+ F
Sbjct: 74 LSHMGEIIVSGPQATEYLNYAFIADYSKLAVGRAKYNHMVEKDGRIIDDLIIYHVEDGIF 133
Query: 66 ILEIDRSKRDSL 77
+ + +++
Sbjct: 134 WVVPNAGNAETV 145
>gi|241764044|ref|ZP_04762083.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN]
gi|241366649|gb|EER61121.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN]
Length = 377
Score = 42.5 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 33/76 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A ++++ DV+ LP R +L G I+ + ++ D
Sbjct: 57 SHMGQLRLVGPDAATAFESLMPVDVIDLPVGKQRYGLLLNDDGGIIDDLMFFRVARDELF 116
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + + I +
Sbjct: 117 VIVNGACKVGDIAHIQ 132
>gi|163734639|ref|ZP_02142078.1| aminomethyltransferase, putative [Roseobacter litoralis Och 149]
gi|161392132|gb|EDQ16462.1| aminomethyltransferase, putative [Roseobacter litoralis Och 149]
Length = 387
Score = 42.5 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 26/56 (46%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + G A + + T +V + + +AIL +GK + +I + + +++
Sbjct: 68 VHLVGPDAAYVIDRVTTRNVEKIAPGRSTYAAILNSEGKFIDDCVIYHLNVNQWLV 123
>gi|149915487|ref|ZP_01904014.1| aminomethyl transferase family protein [Roseobacter sp. AzwK-3b]
gi|149810776|gb|EDM70617.1| aminomethyl transferase family protein [Roseobacter sp. AzwK-3b]
Length = 814
Score = 42.5 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 94/311 (30%), Gaps = 50/311 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G A +L+ +T + + A +G++L F ++ D+F
Sbjct: 500 LPGFTRLWIEGAGADDWLRGFVTGGLPKVGRMNLVYVA--DARGRVLTEFSCIRLAPDSF 557
Query: 66 ILEIDR------------------SKRDSLIDK--LLFYKLRSNVIIEIQPINGVVLSW- 104
+L S R++ ++ LL S ++ + L W
Sbjct: 558 VLITAATAQWHDGELVRNALPEGLSLRETTAERDALLLAGPTSRAVLGPLTDADLSLPWL 617
Query: 105 -NQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRIN 150
+Q T + + R S L N I LRI
Sbjct: 618 SHQHCTVAGQNAFLIRVSFTGELGWEIHAENAAIPVIYDALLAAGAKPFGMYALNSLRIE 677
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MIIT 208
G D +A ++ + K + G+ + Q R ++ +I+
Sbjct: 678 KGYRAWKGDLSTDYSM-LEAGLERF--VKFDKPQDFPGKAALLAEQQRGPSKRFVTLIVE 734
Query: 209 GTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL--TVH 260
P S + D +G V ALA+ R D + + T H
Sbjct: 735 AGSTDAPYMSTLWHDGQIVGETTSGAWGYRVGASVALAMVRADLAQPGTTLEVEIYGTRH 794
Query: 261 GVRVKASFPHW 271
V+ P W
Sbjct: 795 RATVQPDGPLW 805
>gi|295678117|ref|YP_003606641.1| glycine cleavage system T protein [Burkholderia sp. CCGE1002]
gi|295437960|gb|ADG17130.1| glycine cleavage system T protein [Burkholderia sp. CCGE1002]
Length = 372
Score = 42.5 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCMLNPNGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|66043516|ref|YP_233357.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. syringae B728a]
gi|63254223|gb|AAY35319.1| Glycine cleavage system T protein [Pseudomonas syringae pv.
syringae B728a]
Length = 360
Score = 42.5 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGRQARAWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|28867547|ref|NP_790166.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971656|ref|ZP_03399764.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
gi|301385625|ref|ZP_07234043.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. tomato Max13]
gi|302061507|ref|ZP_07253048.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. tomato K40]
gi|302134609|ref|ZP_07260599.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|31340120|sp|Q88AS0|GCST_PSESM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|28850782|gb|AAO53861.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213923612|gb|EEB57199.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
gi|331014846|gb|EGH94902.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 360
Score = 42.1 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L Q ++ ++ D +
Sbjct: 50 SHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQAGVIDDMIVYLTA-DGY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|330809037|ref|YP_004353499.1| aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377145|gb|AEA68495.1| putative aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 376
Score = 42.1 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 89/299 (29%), Gaps = 63/299 (21%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G A LQ T D+ L + +++L GK + ++ + + F++
Sbjct: 63 GPHAESLLQWATTRDIAKLYPGKSVYASMLDEDGKFVDDCIVYRTGPNAFMVVHGAGTGH 122
Query: 76 SLIDKLLFYKLRSNVIIEIQP------------INGVVLSWNQEHTFSNSSFIDERFSIA 123
+ L+ L V + ++ + + R
Sbjct: 123 EM---LVRSALGRQVAVLFDDDLHDLSLQGPLAVDFLAEHVPGVRQLPYFHHLQTRLFER 179
Query: 124 DVLLHRTWGHNEK---------------------------IASDIKTYHELRINHGI--- 153
V++ RT E+ I LR+ +
Sbjct: 180 PVMISRTGYTGERGYEIFCKAADAPFLWDSILEQGASLGIIPCAFTALDWLRVESSLMFF 239
Query: 154 ------VDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ P D + +D +S K + G E R+ R R + +
Sbjct: 240 PYDNSQMYPFADQKAGDTLW-EMGLDFT--VSPGKQAFRGAEEHLRL--RGQERFKITGV 294
Query: 208 TGTDDLP-PSGSPILTDDIEIGTLG----VVVGKKALAIARIDKVDHAIKKGMALTVHG 261
P +G + + ++G + + K+++AIAR+ G+AL V G
Sbjct: 295 LLEGVRPAEAGDTLWQGNQQVGVITCGMYSRLSKRSMAIARLSVA--CSVPGIALQVRG 351
>gi|313111649|ref|ZP_07797446.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 39016]
gi|310883948|gb|EFQ42542.1| sarcosine oxidase alpha subunit [Pseudomonas aeruginosa 39016]
Length = 810
Score = 42.1 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 475 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 534
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 535 MTTTTGGAARVLEWLELY 552
>gi|71083755|ref|YP_266475.1| sarcosine oxidase subunit alpha [Candidatus Pelagibacter ubique
HTCC1062]
gi|91763209|ref|ZP_01265173.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062868|gb|AAZ21871.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1062]
gi|91717622|gb|EAS84273.1| sarcosine oxidase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
Length = 1002
Score = 42.1 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L R +L G + + ++++E+ +I
Sbjct: 670 STLGKIDIQGTDASEFLNRVYTNAWSKLAIGKCRYGLMLNEDGMVYDDGVTTRLDENHYI 729
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ KL Y
Sbjct: 730 MTTTTGGAANVLGKLEDY 747
>gi|294084625|ref|YP_003551383.1| sarcosine oxidase subunit alpha [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664198|gb|ADE39299.1| sarcosine oxidase, alpha subunit [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 1013
Score = 42.1 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 67/300 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + GK A FL I T L R +L G ++ + +++ E+ F
Sbjct: 679 STLGKIDIQGKDAAEFLNRIYTNSWSKLAVGKCRYGLMLKDDGMVMDDGVTTRLGENHFH 738
Query: 67 LEIDRSKRDSLIDK-----------LLFY--------------------KLR-SNVIIEI 94
+ ++D L Y L+ + + I++
Sbjct: 739 MTTTTGGAAGVLDWMEEWLQTEWPELDVYLTSVTEQWAVATLSGPKAAKILKDAQIDIDL 798
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKI--ASDIK 142
N +S H + I R S L W H K A DI
Sbjct: 799 SASNFPFMSMQDCHIGGIPARIF-RISFTGELSFEINVHARHGLALWTHLMKAGKAHDIT 857
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + + ++ P D MD + +S K +IG+ ++R
Sbjct: 858 PYGTEAMHVLRAEKGFIIVGQE-TDGSVTPTDLNMDWI--VSKQKPDFIGKRALARQSMA 914
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGV------VVGKKALAIAR 243
RK+ + + D + G+ ++ D + +G + V A+A+ +
Sbjct: 915 LENRKQLVGLQTKDPKRVIVEGAHVVVDPDQPMPMEMLGQVTSSYYSPNVNRSIAMAMLK 974
>gi|324998540|ref|ZP_08119652.1| glycine cleavage system aminomethyltransferase T [Pseudonocardia
sp. P1]
Length = 310
Score = 42.1 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G A + +T D+ + A+ + G +L +I +D +
Sbjct: 54 SHLGTVPIAGPGAAAHVNTCLTNDLGRIGPGRAQYTLACNEAGGVLDDMIIYMASDDDLL 113
Query: 67 LEIDRSKRDSLIDKLL 82
L + + ++ L
Sbjct: 114 LVPNAANSTRIVTMLQ 129
>gi|89901790|ref|YP_524261.1| glycine cleavage system T protein [Rhodoferax ferrireducens T118]
gi|89346527|gb|ABD70730.1| glycine cleavage system T protein [Rhodoferax ferrireducens T118]
Length = 403
Score = 42.1 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A L+++I DV+ LP R +L +G I+ + D F+
Sbjct: 79 SHMGQLRLVGPDAGAALESLIPVDVIDLPVGKQRYGLLLNDEGGIIDDLMFVNRGSDIFV 138
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + + I +
Sbjct: 139 I-VNGACKAGDIAHIQ 153
>gi|330720471|gb|EGG98775.1| aminomethyltransferase [gamma proteobacterium IMCC2047]
Length = 342
Score = 42.1 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 46/314 (14%), Positives = 95/314 (30%), Gaps = 68/314 (21%)
Query: 2 SSVYLSNQSFIKVCGKSA---IPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS 58
+ + LS + G A + +L + ++ + + S ILT +G + +I
Sbjct: 29 ALIDLSGLRREHIKGPDASAVVDYL---LPRNMDVIYPGKSGYSTILTDEGGVADDVIIY 85
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQP---------------------- 96
++ +D +++ D+ + K K +V +E
Sbjct: 86 RLADDHYLMASGTGDSDTAMAKATAGK---DVTVEEDDNLHIIALQGPIAHEILDANSPD 142
Query: 97 -INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT------------ 143
I V E T I R + + + D+
Sbjct: 143 NIAEVAFFHQIEITAFGKPAIVSRTVFTGERGYEIIAAAD-VVGDLWDAILEAGKDKGVM 201
Query: 144 ------YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+ LRI ++ D + +A + + KG YIG+ + +
Sbjct: 202 PLSFVGLNILRIEAALLFHPFDVSENESVW-EAGLGWS--VGKEKGDYIGK--AANEARK 256
Query: 198 NIIRKRPMIITGTDDLP-----PSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVD 248
K+ I D+ G I + E+G + + K++A+ +
Sbjct: 257 GQETKKFSGIIADADVAVGEPIAGGEKIFQNGEEVGYVTAALYSTRLNKSIALCYLKP-- 314
Query: 249 HAIKKGMALTVHGV 262
+ G + V G
Sbjct: 315 -GLNVGDKVEVKGA 327
>gi|114771785|ref|ZP_01449178.1| sarcosine oxidase, alpha subunit family protein [alpha
proteobacterium HTCC2255]
gi|114547601|gb|EAU50492.1| sarcosine oxidase, alpha subunit family protein [alpha
proteobacterium HTCC2255]
Length = 1004
Score = 42.1 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL I T + L R + T G + ++++++E+TF+
Sbjct: 670 STLGKIIVKGSDAGKFLDMIYTNLMSNLKVGHCRYGLMCTENGFLSDDGVVARLDENTFL 729
>gi|319793005|ref|YP_004154645.1| glycine cleavage system t protein [Variovorax paradoxus EPS]
gi|315595468|gb|ADU36534.1| glycine cleavage system T protein [Variovorax paradoxus EPS]
Length = 392
Score = 42.1 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A + ++ DV+ LP R +L +G IL + +
Sbjct: 62 SHMGQLRLVGPDAAAAFETLMPVDVIDLPAGKQRYGLLLNDEGGILDDLMFFNEGHCSIF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERF 120
+ ++ + + + I + K+ + ++ P + ++ T + S ERF
Sbjct: 122 VIVNGACKVADIAHIQQ-KIGARCEVQPLPDHALLALQGPQAAATLARLSPGIERF 176
>gi|209549483|ref|YP_002281400.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209535239|gb|ACI55174.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 378
Score = 42.1 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 91/300 (30%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +IS + +D + ++ S +++
Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMISHL-DDHLFVVVNASCKEA 129
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 130 DLAHLQTHIGDRCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A + R H + A + LR+ G+ D
Sbjct: 190 VSRSGYSGEDGFEISIPADKAVDVTMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G + G + R+R + + P G
Sbjct: 250 TTS-PVEAALEWAMQKARRSGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307
Query: 218 -SPILTDDI---EIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D EIG + V G A+ + + + + S
Sbjct: 308 HAKLYADAEGKAEIGEVTSGGFGPSVEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPITVS 367
>gi|171316831|ref|ZP_02906041.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
MEX-5]
gi|171098001|gb|EDT42818.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
MEX-5]
Length = 1003
Score = 42.1 bits (98), Expect = 0.083, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLARSDTS 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ +
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935
>gi|325520084|gb|EGC99298.1| glycine cleavage system aminomethyltransferase T [Burkholderia sp.
TJI49]
Length = 372
Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|254000127|ref|YP_003052190.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. SIP3-4]
gi|253986806|gb|ACT51663.1| glycine cleavage T protein (aminomethyl transferase) [Methylovorus
sp. SIP3-4]
Length = 966
Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 83/275 (30%), Gaps = 63/275 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A FL+ T T R + +L G ++ + +I ED F +
Sbjct: 647 LEVRGPDAAEFLERFYTGSFKTQKIGRTRYALLLDEAGVMVDDGIACRIAEDYFYITAST 706
Query: 72 SKRDSLIDKLLFY-------------------------KLR---SNVIIEIQPINGVVLS 103
+ ++ ++ + R S + + +
Sbjct: 707 TNAAAVYREMQRWLQIWQLDVGLVNVTGAYGGINLAGPAARGILSKLTLRPLDDASLPF- 765
Query: 104 WNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPS 163
+ + + + + + S ++ L + +G+ D F
Sbjct: 766 --GAVCDTEIAGVPACLIRVGFVSDLAFEMHVPAGSAQHVWNAL-LENGVADGLRPFGTD 822
Query: 164 T--------------------IFPHDALMDLLNGISLTKGCYIGQ---EVVSRIQHRNII 200
T P +A D I K +IGQ ++++R +
Sbjct: 823 TQRLLRLEMGNHLIGQDTDGLTQPFEAGSD--GAIQFAKPFFIGQRSLQIIAR----KPL 876
Query: 201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
KR + T ++ G I ++ IG G + G
Sbjct: 877 NKRLVPFTLSEGY--QGETINECNLVIGADGNIKG 909
>gi|170697517|ref|ZP_02888607.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
IOP40-10]
gi|170137540|gb|EDT05778.1| sarcosine oxidase, alpha subunit family [Burkholderia ambifaria
IOP40-10]
Length = 1003
Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNDAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLTRSDTS 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTV 935
>gi|115280177|gb|ABI85694.1| glycine cleavage system T protein [Burkholderia ambifaria AMMD]
Length = 377
Score = 42.1 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 57 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 116
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + I + Q G+ ++ + + + + A
Sbjct: 117 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 163
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ T S++K ++ R+
Sbjct: 164 KVWTTVPAARAATSELKPFNAARVA 188
>gi|254480466|ref|ZP_05093713.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214039049|gb|EEB79709.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 809
Score = 42.1 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V GK A+ LQ + A++ + + + L +G I I+++ + F
Sbjct: 485 SSFGKFEVTGKDAVTTLQNLSCANID-VDHGQVVYTQWLNERGGIEADLTIARLAANRFW 543
Query: 67 L 67
+
Sbjct: 544 V 544
>gi|167042042|gb|ABZ06778.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_141F21]
Length = 932
Score = 42.1 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ I + G FL I T + LP AR +L G + ++I E+
Sbjct: 596 CDVTSLGKIDIKGPDIAEFLNRIYTNAWMKLPVGKARYGVMLREDGIVFDDGTTTRISEN 655
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122
F + ++ +++ L +Y V + P V VLS ++ + + + R +
Sbjct: 656 HFHMTTTTAQAVNVLAHLEYY---LQV---VWPELNVNVLSTTEQWAGAALAGPNSR-EL 708
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNG-ISLT 181
L T NE + Y E + G+ S ++ ++ G
Sbjct: 709 LSKLFPETNILNEAL--PFMGYKESDL-FGVPARIFRISFSGELAYEINVESSYGTFMWE 765
Query: 182 KGCYIGQEVVS 192
K GQE+
Sbjct: 766 KIIEFGQEMNI 776
>gi|197116793|ref|YP_002137220.1| glycine cleavage system T protein [Geobacter bemidjiensis Bem]
gi|197086153|gb|ACH37424.1| glycine cleavage system T protein [Geobacter bemidjiensis Bem]
Length = 363
Score = 42.1 bits (98), Expect = 0.086, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS----LIDKLL 82
V +P +R +L P G ++ ++ ++ ED ++ ++ + + + +L
Sbjct: 76 VKGIPIGRSRYGFLLNPSGGVIDDLIVFRLAEDEVMIVVNAATAPNDFKVIASRLK 131
>gi|189461998|ref|ZP_03010783.1| hypothetical protein BACCOP_02667 [Bacteroides coprocola DSM 17136]
gi|189431392|gb|EDV00377.1| hypothetical protein BACCOP_02667 [Bacteroides coprocola DSM 17136]
Length = 362
Score = 42.1 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A+ F+Q + + + L + + G I+ L+ E D ++L ++ +
Sbjct: 56 VKGPHALEFIQQVTSNNAAVLTPGKVQYTCFPNETGGIVDDLLVYFYEPDKYMLVVNAAN 115
Query: 74 RD 75
+
Sbjct: 116 IE 117
>gi|254482374|ref|ZP_05095614.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214037379|gb|EEB78046.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 384
Score = 42.1 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 98/303 (32%), Gaps = 60/303 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F Q + D+ + + I G I+ ++ K+ E+ F L I
Sbjct: 70 VEITGPDAAKFTQFLSCRDLSKMQVGQCKYVLITDQDGGIINDPIMLKLGENHFWLSIAD 129
Query: 72 S------------------KRDSLIDKLL------FYKLRSNVIIEIQPINGVVLSWNQE 107
S + + L LR+ P + W E
Sbjct: 130 SDVLLWAKGVAVSSGMDVRITEPDVSPLQLQGPKSRDVLRA--AFGDTPTDLKYY-WFME 186
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------------LRINH 151
+ + I R + L + + + + + RI
Sbjct: 187 YDWEGVPLIISRTGWSSELGYEIFLRDGSAGDKLWEHLMAVGTPLGLKPGHTSSIRRIEA 246
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ + D + P++ MD L + + ++ + ++ I+ R + + I +
Sbjct: 247 GMLSYHADMTLAN-NPYEMGMDRLVDLEMDAD-FVSKAALTSIRERGVD--QYFIGLEIE 302
Query: 212 DLPPSGS-----PILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
P GS PI + ++G L + ALA+ D G+ + ++
Sbjct: 303 GAPLIGSNDAHHPIFSAGTKVGQLNSSIYSPRLKKNIALAMVATDASSEG--SGLQIDIN 360
Query: 261 GVR 263
G R
Sbjct: 361 GDR 363
>gi|76155538|gb|AAX26829.2| SJCHGC04473 protein [Schistosoma japonicum]
Length = 157
Score = 42.1 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G + FL+++ AD+ L + S L G IL +I K +E + +
Sbjct: 40 MQVFGNDRVNFLESLTCADISGLSSSVGTLSVFLLDDGGILDDTIIVKCKEPYLYIVSNA 99
Query: 72 SKRDSLIDKLLFY 84
+ + +
Sbjct: 100 ACSSKIQAHVTKM 112
>gi|88704858|ref|ZP_01102571.1| Glycine cleavage T protein (aminomethyl transferase)
[Congregibacter litoralis KT71]
gi|88701179|gb|EAQ98285.1| Glycine cleavage T protein (aminomethyl transferase)
[Congregibacter litoralis KT71]
Length = 370
Score = 42.1 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 97/308 (31%), Gaps = 48/308 (15%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G L++++ D+ L + + +G + +I++ DTF
Sbjct: 52 SHMGQFILEGPGITTTLESLVPVDLEALGEHRQSYALLTNDEGGVRDDLIITRWGPDTFF 111
Query: 67 LEIDRSKRDS-------------LIDKLLFYKL--------RSNVIIEIQPINGVVLSWN 105
L ++ + + + +L L R+ V+ E+ P +
Sbjct: 112 LVVNAACKAEDRAWIESQLAPGQTLRELEGQGLLAVQGPKARA-VLAELLPFAEDLTFLQ 170
Query: 106 QEHTFSNSSFI---------------DERFSIADVLLHRTWGHNEKIASDIKTYHELRIN 150
H N + I + + + H++ + LR+
Sbjct: 171 GAHGELNGAPIYVTCSGYTGEDGYELSVPEAQVEAVARSLLAHDDVAPIGLGARDSLRLE 230
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP- 204
G+ + P+ P +A ++ G Y G E ++R R R
Sbjct: 231 SGLCLYGHELSPAIS-PIEAKLNWSISKSRRSGGAKAGGYPGAERIAREMSEGTSRVRVG 289
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVH 260
M + G + + + IG + +A+A +D A+ +++ V
Sbjct: 290 MRVLGKRPVREGQNVLNAAGEVIGAVSSGAFAATVDAPVAMAFVDSSYAALDTELSVDVR 349
Query: 261 GVRVKASF 268
G +
Sbjct: 350 GKALAVVV 357
>gi|209522406|ref|ZP_03271015.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. H160]
gi|209497162|gb|EDZ97408.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. H160]
Length = 813
Score = 42.1 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ E ++
Sbjct: 479 STLGKIDIQGPDSAKLLNWVYTNPWTKLEVGKCRYGLMLDENGMIFDDGVTVRLAEQHYM 538
Query: 67 LEIDRSKRDSLIDKLLFY--------KLR------------------SNVIIEI-QPING 99
+ ++ L + ++R V+ ++ I+
Sbjct: 539 MTTTTGGAARVLTWLERWLQTEWPDLRVRLASVTDHWATFAVVGPMSRKVLQKVCDDIDF 598
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI---- 141
++ +E T + ++ R S + L W ++
Sbjct: 599 ANAAFPFMTYREGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFNITP 658
Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D ++ PHD M G+ ++G+ +SR
Sbjct: 659 YGTETMHVLRAEKGYIIVGQD-TDGSMTPHDLGM---GGLVAKSKDFLGKRSLSRSDTAK 714
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 715 SGRKQLVGLLADDASFVIPEGSQIVAG 741
>gi|110633372|ref|YP_673580.1| glycine cleavage system aminomethyltransferase T [Mesorhizobium sp.
BNC1]
gi|110284356|gb|ABG62415.1| glycine cleavage system T protein [Chelativorans sp. BNC1]
Length = 364
Score = 42.1 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 82/261 (31%), Gaps = 37/261 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + G + FL D L ++ + +L + I+ +++++ D F+
Sbjct: 53 SHMQLFTIEGANTAAFLSRACPLDAAALEAGKSKYTVLLNEKAGIIDDLIVTRLGSDRFM 112
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------FSNSSFI 116
+ + F + + ++I ++ V L+ ++ SF+
Sbjct: 113 VVANAGNAAKDEAHFRF--VARDFDVKIDALDRVFLALQGPEAESILLGAGLDLADLSFM 170
Query: 117 DERFSIADVLLHR-----------------TWGHNEKIASD-------IKTYHELRINHG 152
+ R EKI +D + LR+ G
Sbjct: 171 TAAEPRENWFAARSGYTGEDGFEVALPEEEARRFAEKILADERVIWIGLAARDSLRLEAG 230
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDD 212
+ D + A++ + G +IG E + R +R R +
Sbjct: 231 LCLHGQDLDETIDPASAAILWAIPKKIRESGDFIGAEALRRTIAEGPVRVRVGLKPDGRQ 290
Query: 213 LPPSGSPILT-DDIEIGTLGV 232
+G+ +L + +G +
Sbjct: 291 PVRTGALLLNEEGQTVGKVTS 311
>gi|292493461|ref|YP_003528900.1| sarcosine oxidase subunit alpha [Nitrosococcus halophilus Nc4]
gi|291582056|gb|ADE16513.1| sarcosine oxidase, alpha subunit family [Nitrosococcus halophilus
Nc4]
Length = 979
Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 9/178 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + L AR +L G + +++ E+
Sbjct: 641 ADVSTLGKIDIQGADASEFLNRVYINHWSKLAVGKARYGVMLREDGYVFDDGTTARLAEN 700
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122
+++ + ++ L FY+ I P V + S + + R +
Sbjct: 701 HYLMSTTTTNASAVQSHLEFYQQM------IWPDLDVKITSVTDHWAVVALAGPNSRAVL 754
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDP--NTDFLPSTIFPHDALMDLLNGI 178
+ R G+ + + I + + P D + L +
Sbjct: 755 EGLFERRDVGNQALPFLGVMETELHGVQARIARLSFSGERAYEIAVPADYGLALWEAL 812
>gi|325002231|ref|ZP_08123343.1| FAD dependent oxidoreductase [Pseudonocardia sp. P1]
Length = 827
Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 55/276 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65
++V G A FL ++T + + +L G + ++++ E F
Sbjct: 514 LEVTGPGACAFLDGLVTGKMDK-SVGSVTYTLMLDEAGGVRSDLTVARLGEQLFQVGANS 572
Query: 66 ILEID-------------------------------RSKRDSL----IDK--LLFYKLRS 88
L++D R L + L F++ R+
Sbjct: 573 HLDLDHLRRALPADGSARVRDITGGTCCIGVWGPLARDLVQPLTGDDLSHEGLKFFRARA 632
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
I P+ + LS+ E + + + + DVL + +A+ ++ LR
Sbjct: 633 -AHIAGIPVTVMRLSYVGELGWEIYTGAEYGQKLWDVL-YAAGRPLGVVAAGRAAFNSLR 690
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLT---KGCYIGQEVVSRIQHRNIIRKRPM 205
+ G D P++A + G ++ KG ++G+ V + + R+
Sbjct: 691 LEKGYRSWGADMTTEHD-PYEAGL----GFAVRPQTKGDFVGRAAVEALDPEAVTRRLTC 745
Query: 206 IITGTDDLPPSG-SPILTDDIEIGTLGVVVGKKALA 240
+ G +L D G + L
Sbjct: 746 LTVDDGRSVVLGHEVVLVDGEPAGYVTSAAYAYTLG 781
>gi|172059211|ref|YP_001806863.1| glycine cleavage system aminomethyltransferase T [Burkholderia
ambifaria MC40-6]
gi|238689148|sp|B1YQQ3|GCST_BURA4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|171991728|gb|ACB62647.1| glycine cleavage system T protein [Burkholderia ambifaria MC40-6]
Length = 372
Score = 42.1 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + I + Q G+ ++ + + + + A
Sbjct: 112 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 158
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ T S++K ++ R+
Sbjct: 159 KVWTTVPAARAATSELKPFNAARVA 183
>gi|170701968|ref|ZP_02892890.1| glycine cleavage system T protein [Burkholderia ambifaria IOP40-10]
gi|229221144|ref|YP_772028.2| glycine cleavage system aminomethyltransferase T [Burkholderia
ambifaria AMMD]
gi|170133117|gb|EDT01523.1| glycine cleavage system T protein [Burkholderia ambifaria IOP40-10]
Length = 372
Score = 42.1 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADV 125
+ ++ + I + Q G+ ++ + + + + A
Sbjct: 112 RVVVNAGTAEKDIAWFN--------QLNEQGGYGLTIA-----PRRDFAIVAVQGPNARE 158
Query: 126 LLHRTWGHNEKIASDIKTYHELRIN 150
+ T S++K ++ R+
Sbjct: 159 KVWTTVPAARAATSELKPFNAARVA 183
>gi|254254535|ref|ZP_04947852.1| hypothetical protein BDAG_03838 [Burkholderia dolosa AUO158]
gi|124899180|gb|EAY71023.1| hypothetical protein BDAG_03838 [Burkholderia dolosa AUO158]
Length = 1003
Score = 42.1 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLAEQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
F N +F + R + N + +
Sbjct: 785 FGNDAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ T+
Sbjct: 901 KEGRKQFVGLLTDDEQFVLPEGAQIVAKDTQVSTV 935
>gi|297171566|gb|ADI22563.1| glycine cleavage system T protein (aminomethyltransferase)
[uncultured Rhizobium sp. HF0500_10F10]
Length = 380
Score = 42.1 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 49/261 (18%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ DV L R + G IL +I+ D L ++ + +D
Sbjct: 71 ADAALALETLVPVDVAGLKEGRQRYAVFTGSDGGILDDLMIANRG-DHLFLVVNAACKDQ 129
Query: 77 LIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW----- 131
I L L ++ +E + +L+ + + ++ + + R
Sbjct: 130 DIAHLRA-GLEASCEVEPLT-DRALLALQGPAAEAALATLNPAIAEMRFMDVRALDLLGA 187
Query: 132 -------------GHNEKIASDIK-------------------TYHELRINHGIVDPNTD 159
G+ + +D LR+ G+ D
Sbjct: 188 ACIVSRSGYTGEDGYEISVPADAAEKLAKALLALETVEPIGLGARDSLRLEAGLCLYGND 247
Query: 160 FLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLP 214
T P + ++ +G + G +++ + R+R ++
Sbjct: 248 IDT-TTTPVEGALEWSMQKVRKAGGDREGGFPGADIILKQLAEGATRRRVGLLPDGRAPV 306
Query: 215 PSGSPILT---DDIEIGTLGV 232
G+ + +GT+
Sbjct: 307 RGGTSLFAEAEGGAPVGTVTS 327
>gi|169848891|ref|XP_001831150.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130]
gi|116507877|gb|EAU90772.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130]
Length = 410
Score = 42.1 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N + + G A +LQ++ + D+ L + A A + +G L ED F
Sbjct: 184 LENWGLLALQGPKAASYLQSLTSFDLNQLLFGKA---AFVPIEGFNLHVARGGYTGEDGF 240
Query: 66 ILEIDRSKRDSLIDKLLF 83
+ I S+ + + L
Sbjct: 241 EISIPPSQTEEVARLLSK 258
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 93/299 (31%), Gaps = 59/299 (19%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
G +A FL+ + + + +LP + S +L +G I+ +I+K D F + + +R
Sbjct: 95 RGATATEFLEWLTPSSLSSLPAYSSTLSLLLNEKGGIIDDTIITKHAADAFYVVTNAGRR 154
Query: 75 DSLIDKLLFYKLR--------SN--VIIEIQPINGVVLSWNQEHT--------------- 109
+ + + KL V +E+ G++ +
Sbjct: 155 ERDLAWIK-EKLEEWNNSEAGKKGPVELEVLENWGLLALQGPKAASYLQSLTSFDLNQLL 213
Query: 110 FSNSSFID--------ERFSIADVLL-------------HRTWGHNEKIASDIKTYHELR 148
F ++F+ R R N + + LR
Sbjct: 214 FGKAAFVPIEGFNLHVARGGYTGEDGFEISIPPSQTEEVARLLSKNPVQLTGLGARDSLR 273
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNIIRKRPMII 207
+ G+ + P +A + + + G +IG + + + R+R +I
Sbjct: 274 LEAGMCLYGNEI-DENTGPVEAGLTWVIPKERREAGEFIGADAIRKQIKEGPSRRRIGLI 332
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIARIDKVDHAIKKGMALTVH 260
+ + EIG + + A+ + + KKG L V
Sbjct: 333 VEGAPARQGAKIVGPGNEEIGVVTSGIPSPTLGKNIAMGYVK----NGLHKKGTELQVD 387
>gi|187919753|ref|YP_001888784.1| sarcosine oxidase subunit alpha family protein [Burkholderia
phytofirmans PsJN]
gi|187718191|gb|ACD19414.1| sarcosine oxidase, alpha subunit family [Burkholderia phytofirmans
PsJN]
Length = 1000
Score = 41.7 bits (97), Expect = 0.099, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 96/314 (30%), Gaps = 57/314 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ + ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99
+ ++ L ++R V+ ++ Q I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ +E T + ++ R S + L W + DI
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD---DIEIGTLGVVVGKKALAIARIDKVDHAIKK 253
RK+ + + D + P GS I+ LG V I + +K
Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGETAAMLGHVTSSYYSPILKRSIAMAVVKG 961
Query: 254 GMALTVHGVRVKAS 267
G+ V + S
Sbjct: 962 GLDKIGETVTIPLS 975
>gi|323135588|ref|ZP_08070671.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242]
gi|322398679|gb|EFY01198.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242]
Length = 383
Score = 41.7 bits (97), Expect = 0.100, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 39/245 (15%)
Query: 26 IITADVLTLPYKIARGSAILTPQGKILLYFLISKIE--EDTFILEIDRSKRDS----LID 79
+ AD+ L R + +L G IL L++++ E+ L ++ S++ + +
Sbjct: 80 LTPADLAGLAPGRTRYTQLLDESGGILDDLLVTRLPGVEERLFLVVNASRKTADFALIAA 139
Query: 80 KLLFYKL-----RSNVIIE---IQPINGVVLSWNQEHTFSNSSFID-------------- 117
+L + L R+ + ++ I G +L ++ F + D
Sbjct: 140 RLPHFDLNILNDRALIALQGPCAASILGALLPGAEDLPFMSWRAFDFDGASFFVSRTGYT 199
Query: 118 --------ERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHD 169
R A+ + R H + + LR+ G+ D T P +
Sbjct: 200 GEDGFEISLRADRAEDFVMRLLAHEDVAPVGLGARDALRLEAGLPLYGHDI-DETTDPVE 258
Query: 170 ALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT-DDIEI 227
A + G +G + G +S R R ++ + G+ +L + EI
Sbjct: 259 AGLAWSIGKRRRAEGGFPGFARISAALGDGPSRLRVGLLPQSKAPVRDGATLLAPNGEEI 318
Query: 228 GTLGV 232
G +
Sbjct: 319 GLVTS 323
>gi|229593024|ref|YP_002875143.1| sarcosine oxidase subunit alpha [Pseudomonas fluorescens SBW25]
gi|229364890|emb|CAY52963.1| sarcosine oxidase alpha subunit [Pseudomonas fluorescens SBW25]
Length = 1005
Score = 41.7 bits (97), Expect = 0.100, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL I + L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 731 MTTTTGGAARVLQWLEIY 748
>gi|134099691|ref|YP_001105352.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
gi|291005405|ref|ZP_06563378.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
gi|133912314|emb|CAM02427.1| FAD dependent oxidoreductase [Saccharopolyspora erythraea NRRL
2338]
Length = 810
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 86/268 (32%), Gaps = 52/268 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI----- 66
+++ G+ A+ FLQ + T + + R + +L G + ++++E D F
Sbjct: 497 LEISGRGALDFLQHMTTNQMA-VRPGTVRYTLLLDEAGGVRSDLTVARLERDRFQIGVNG 555
Query: 67 -LEID-------------------------------RSKRDSL------IDKLLFYKLRS 88
L++D R L F+K
Sbjct: 556 NLDLDWFLRHAPADGSVVVRDITAGTCCVGVWGPLARDLVQPLSRDDFSHKGFGFFKA-K 614
Query: 89 NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELR 148
+ I P+ + +S+ E + + D + D L G A ++ LR
Sbjct: 615 HARIAGVPVTAMRVSYVGELGWEIYADSDVGLRLWDALWEAGQG-LGVTAGGRSAFNSLR 673
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G TD P +A + + + K ++G+ + R+R + +
Sbjct: 674 LEKGYRSWGTDMTTEH-NPFEAGVGF--AVRMDKADFVGRSALVEAAAE-QPRRRLVPLL 729
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234
+ P+ T D +G +
Sbjct: 730 MDQPEHVVMGKEPVHTADGSVGYVTSAA 757
>gi|83950160|ref|ZP_00958893.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
gi|83838059|gb|EAP77355.1| aminomethyl transferase family protein [Roseovarius nubinhibens
ISM]
Length = 803
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 56/317 (17%), Positives = 103/317 (32%), Gaps = 59/317 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIA--RGSAILTPQGKILLYFLISKIEED 63
LS+ + V G A L + LP K + +L+ G+I + I+++ +D
Sbjct: 486 LSSFAKFDVSGPGAEALLDRLTAN---RLPRKQGGITLTHVLSENGRIEGEWTITRLGDD 542
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQ----------EHTFSN 112
F + D+L ++V I + G+++ + SN
Sbjct: 543 RFYVLSGAGTERMARDQLSL-AAGADVEISNVTDRYGMLVVAGPKSRDVLAPLTDADLSN 601
Query: 113 SSFI---DERFSIADVLLHRT---------WGHNEKIASDIKTYHELRIN---HGIVDPN 157
+ F + IA + + W + +A + Y + + HGI D
Sbjct: 602 AGFRWLSGQEIEIAGIPVRALRVNYVGELGWELHAPMADLARLYDAIWASGTDHGIADFG 661
Query: 158 TDF----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
L + I +A + KG +IG+ ++ I+
Sbjct: 662 VQAVNSLRMEKGYRGYAAELTNEITLIEADCQRF--YAPDKGDFIGRAATEKVHQEGIVT 719
Query: 202 KRPM-IITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIAR---IDKVDHAIKKGMAL 257
K + TD G ++ D +G G A + V I +G+ +
Sbjct: 720 KLVYGEVAATDCDIYGGEAVMQGDRVVGVCTS--GGYGHATGKSLAFAYVSPEITEGLEV 777
Query: 258 TVHGVRVKASF---PHW 271
V G R + P W
Sbjct: 778 VVLGERRAFTLHDAPVW 794
>gi|254463805|ref|ZP_05077216.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium
Y4I]
gi|206684713|gb|EDZ45195.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium
Y4I]
Length = 981
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T+ TL R +L G ++ +++ E+
Sbjct: 646 CDVSTLGKIDIQGPDAGKFLDFLYTSTFSTLKAGKVRYGLMLREDGFVMDDGTTARLGEN 705
Query: 64 TFILEIDRSKRDSLIDKL 81
F++ + ++ L
Sbjct: 706 HFLMTTTTAAAGQVMAHL 723
Score = 35.2 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 8 NQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-----SAILTPQGKILLYFLISKIEE 62
+ V G + L ++ DV + + +L +G++ F IS E
Sbjct: 744 QWAQFAVAGPKSQELLNGLVDEDVNS---GTWPFMGCGEATVLGVKGRL---FRISFSGE 797
Query: 63 DTFILEIDRSKRDSLIDKLLF 83
+ L + +SL +LL
Sbjct: 798 HAYELAVPARYGESLFRELLK 818
>gi|239834743|ref|ZP_04683071.1| FAD dependent oxidoreductase domain protein [Ochrobactrum
intermedium LMG 3301]
gi|239822806|gb|EEQ94375.1| FAD dependent oxidoreductase domain protein [Ochrobactrum
intermedium LMG 3301]
Length = 813
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+V G A +L I+ S LTP+G + ++++++++ +F +
Sbjct: 498 EVSGPGAEAWLDGILAN--RLPKAGRVNLSHHLTPKGGVQAEYVVARLDDGSFYM 550
>gi|213406629|ref|XP_002174086.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275]
gi|212002133|gb|EEB07793.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275]
Length = 399
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 50/278 (17%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G++A FL++I + + L + S G I+ +ISK ++ T+ + + +
Sbjct: 89 VRGENATAFLESITPSSLQELKPMHSTLSVFTNETGGIVDDTIISKHDDKTYYIVTNAAC 148
Query: 74 RD----SLIDKLLF--------YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
D +L L ++ +I +Q V TF S + +
Sbjct: 149 ADKDTENLSKNLNKWTKGGVTIDRIEGRALIALQGPEAVAALAKLAVTFDFPSLKFGKSA 208
Query: 122 IADVLLHRTWGH----------------------NEKIASD-------IKTYHELRINHG 152
DVL E + +D + LR+ G
Sbjct: 209 YIDVLGANCLVSRSGYTGEDGVEMSVPADDSMKIAETLLADSRVQPIGLGARDSLRLEAG 268
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
+ D T P + + + G +G ++G + + + +R +
Sbjct: 269 MCLYGNDI-DDTTSPVEGSLSWVIGKRRRSEGNFVGSSRILK-ELMGGPSRRRVGFLVQG 326
Query: 212 DLPPSGSPILTDDIEIGTLGVVV------GKKALAIAR 243
GS + D + +G + A+ R
Sbjct: 327 APAREGSAVEVDGVNVGRVTSGCPSPSLGKNIAMGYVR 364
>gi|220934867|ref|YP_002513766.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
gi|219996177|gb|ACL72779.1| glycine cleavage T protein (aminomethyl transferase)
[Thioalkalivibrio sp. HL-EbGR7]
Length = 963
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 51/305 (16%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +S ++V G A F+ + T + T+ + R + ++ G ++ + ++ E
Sbjct: 627 LIDVSTLGKVEVFGPDAARFMDQLYTLKLSTVKQGMTRYALMVDEAGVVIDDGVCARWGE 686
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID----- 117
+ F + + +++ ++ N+ +++ + S N +
Sbjct: 687 EHFYVSTTTTGAEAIFRQMQRMIGEWNLKVDVVNRTSQLASMNIAGPLTRDVLQPLTDVD 746
Query: 118 ---ERFSIADVLLHRTWGHNE-----------------KIASDIKTYHE----------- 146
F R G A + +
Sbjct: 747 LSQAAFPFLGARQGRVAGVPAWLFRVGFVGELGFEIHVPAAQALHVWEALMEAGASRGIR 806
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G + D T P DA M + K + G+ + ++ R
Sbjct: 807 PFGVEAQRQLRLEKGHLIVGQD-TDGTSSPFDANMAW--AVKFDKPFFQGKRSLQILKER 863
Query: 198 NIIRKRPMIITGTDDLPPSGS--PILTDDIEIGTLGVVVGKKAL-AIARIDKVDHAIKKG 254
R + G+ P ++ DD G + + +L A + VD +
Sbjct: 864 AANRLVGFRLPGSHPGPIPRECHLVIHDDDIAGRVTSIGYSPSLKAWVGLAMVDKTLADA 923
Query: 255 MALTV 259
L++
Sbjct: 924 AQLSI 928
>gi|111224531|ref|YP_715325.1| glycine cleavage system aminomethyltransferase T [Frankia alni
ACN14a]
gi|123044103|sp|Q0RFF6|GCST_FRAAA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|111152063|emb|CAJ63788.1| Aminomethyltransferase (Glycine cleavage system T protein) [Frankia
alni ACN14a]
Length = 365
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 41/320 (12%), Positives = 89/320 (27%), Gaps = 71/320 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +V G A F+ A ++ D+ + A+ + +G ++ + + +
Sbjct: 54 SHLGKAEVTGAGAAEFVNACLSNDLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVL 113
Query: 67 LEIDRS----------------------------------KRDSLIDKLLFYKLRSNVII 92
L + + +L+ L
Sbjct: 114 LVPNAANNAEVVARLAAAAPAGVSVTDRHTGFGVLAVQGPAAPTLVAALGL--------- 164
Query: 93 EIQPINGVVLSWNQEH------TFSNSSFIDER-------FSIADVLLHRTWGHNEKIAS 139
P +G +S+ + S + ER + L + E + +
Sbjct: 165 ---PTDGAYMSFVEAAWKGRPVIVCRSGYTGERGYELLPRWDDTPALWDALFAAGEGLGA 221
Query: 140 D---IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ LR G D P TI P A + K + G+E + +
Sbjct: 222 SPVGLGARDTLRTEMGYPLHGQDLSP-TITPVQARSGW--AVGWGKERFWGREALLAERA 278
Query: 197 RNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK----KALAIARIDK-VDHA 250
R + + +P P+ D +G + + + +A +D+ V
Sbjct: 279 AGPARLLWGLASTGRAIPRPHMPVTAADGAPVGEVTSGTFSPTLRQGIGLALLDRGVAEG 338
Query: 251 IKKGMALTVHGVRVKASFPH 270
+ + + P
Sbjct: 339 DTVNVDVRGRPGPMTVVRPP 358
>gi|260905573|ref|ZP_05913895.1| glycine cleavage system aminomethyltransferase T [Brevibacterium
linens BL2]
Length = 427
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 18/186 (9%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ +++ G A FL + A + A+ ++ G +L + +I ++ F
Sbjct: 54 LSHMGEVRLTGSDAAAFLDYALVAKYSKMKIGKAKYGVLVNEAGYLLDDLITYRIGDEEF 113
Query: 66 ILEIDRS----KRDSLIDKLLFYKLR-------SNVIIEIQPINGVVLSWNQEHTFSNSS 114
++ + S +L ++L + LR + + + + ++
Sbjct: 114 LIVPNASNTPTVVAALKERLQAF-LRDESPGADAKL-FDESDVTALIAVQGPNSEAIILR 171
Query: 115 FIDERF--SIADVLLHRTWGHNEKIASDIKTYHELRINHGI--VDPNTDFLPSTIFPHD- 169
+DE A D + GI + + P
Sbjct: 172 ALDEGAHGEFGPATTSADGSSANDAAVDGSANDSAVNSTGITVGEAVRELKYYAWMPLTI 231
Query: 170 ALMDLL 175
A +DL+
Sbjct: 232 AGIDLM 237
>gi|221209327|ref|ZP_03582308.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1]
gi|221170015|gb|EEE02481.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1]
Length = 1003
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
F N +F + R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D +I T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935
>gi|154318225|ref|XP_001558431.1| hypothetical protein BC1G_03280 [Botryotinia fuckeliana B05.10]
gi|150842803|gb|EDN17996.1| hypothetical protein BC1G_03280 [Botryotinia fuckeliana B05.10]
Length = 475
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 82/293 (27%), Gaps = 66/293 (22%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71
+ G A FLQ I A + L S +L P G I+ +I+++ + F + +
Sbjct: 132 RFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTNA 191
Query: 72 SKRDSLIDKL--LFYKLRS----NVIIEIQPINGVVLSWNQEHT---------------- 109
R+ + L V E+ G+V E
Sbjct: 192 GCREKDLKYLGEELEAFTKEGGEKVGWEVLDGWGLVALQGPESEEILKELLAEEMKEGGF 251
Query: 110 ----FSNSSFIDERFSIADVLLH-------------------------------RTWGHN 134
F S F+ R + + ++ G
Sbjct: 252 DNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTGEDGFEISIPESETVMVTESLLKSAGET 311
Query: 135 EKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSR 193
+ + LR+ G+ D T P +A + + G +G + G EV+ +
Sbjct: 312 RLQLAGLGARDSLRLEAGMCLYGHDL-DDTTTPVEAALGWVVGKERRTEGGFHGAEVILK 370
Query: 194 IQH------RNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALA 240
+ R+R +I + +IG + L
Sbjct: 371 QLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGNITSGCPSPTLG 423
>gi|51244153|ref|YP_064037.1| glycine cleavage system, T protein [Desulfotalea psychrophila
LSv54]
gi|50875190|emb|CAG35030.1| related to glycine cleavage system, T protein [Desulfotalea
psychrophila LSv54]
Length = 429
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT--------LPYKIARGSAILTPQGKILLYFLIS 58
S+ S + V G + LQ T D+ LP L G +L L+
Sbjct: 55 SHMSVLTVQGAGSRAVLQHCFTKDLERAIGPKKLALPVGRCVYGLFLLEDGSVLDDALVY 114
Query: 59 KIEEDTFILEIDRSKRDSLIDKL 81
+ E+++++ ++ S++ L
Sbjct: 115 MLAENSYMVVVNAGMGGSVVSHL 137
>gi|260434105|ref|ZP_05788076.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417933|gb|EEX11192.1| sarcosine oxidase subunit alpha [Silicibacter lacuscaerulensis
ITI-1157]
Length = 977
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 31/80 (38%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G+ A FL + T TL R +L G ++ +++ +
Sbjct: 642 CDVSTLGKIDIQGRDAAQFLDFVYTNTFSTLKVGRVRYGLMLREDGFVMDDGTTARLGDS 701
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 702 HFLMTTTTAAAGDVMKHLEF 721
>gi|256379661|ref|YP_003103321.1| glycine cleavage system aminomethyltransferase T [Actinosynnema
mirum DSM 43827]
gi|255923964|gb|ACU39475.1| glycine cleavage system T protein [Actinosynnema mirum DSM 43827]
Length = 365
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 60/306 (19%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
L++ I + G A L A++ + AR + I G ++ ++ ++ E
Sbjct: 50 LTHMGEIVLSGPEAGAALDHALV-GHCSAIGVGRARYTMICAESGGVVDDLIVYRLAEQE 108
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+++ + S ++ +L R+ +++ ++ T +
Sbjct: 109 YLVVANASNATTVAAEL---VERAKGFDTEVVDRSEDYALIAVQGPASTTILAGLTSTDL 165
Query: 121 SIA-------------DVLLHRTWGHNE-------KIASDIKTYHE-------------- 146
+ VLL RT E A +
Sbjct: 166 ASVKYYASYPAEVAGKPVLLARTGYTGEDGFELFTAPADAAHVWRALLEAGQPHDLKPAG 225
Query: 147 ------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-GCYIGQEVVSRIQHRNI 199
LR+ G+ + P +A + + + L K G ++G+ ++
Sbjct: 226 LGCRDTLRLEAGMPLYGNELGLDRT-PFEANLGRV--VKLDKPGDFVGRAALAAAAEAGA 282
Query: 200 IRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKG 254
+ T + P G P+L D EIG + ++A+A + + + + G
Sbjct: 283 DSTLVGLRTASRRAPRHGYPVLDADGAEIGVVTSGALSPTLGHSVAMAYVTRANA--EPG 340
Query: 255 MALTVH 260
ALTV
Sbjct: 341 TALTVD 346
>gi|222086826|ref|YP_002545360.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter
K84]
gi|221724274|gb|ACM27430.1| sarcosine oxidase alpha subunit protein [Agrobacterium radiobacter
K84]
Length = 985
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 31/81 (38%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ GK A FL + + L LP AR +L G + S +
Sbjct: 647 LCDVSTLGKIEIFGKDAAEFLNRLYSNAFLKLPIGKARYGLMLREDGIVFDDGTTSHLSP 706
Query: 63 DTFILEIDRSKRDSLIDKLLF 83
+ F L + ++ + F
Sbjct: 707 NHFFLTTTTAMAGEVMTHMEF 727
>gi|161520055|ref|YP_001583482.1| sarcosine oxidase alpha subunit family protein [Burkholderia
multivorans ATCC 17616]
gi|189353764|ref|YP_001949391.1| sarcosine oxidase alpha subunit [Burkholderia multivorans ATCC
17616]
gi|160344105|gb|ABX17190.1| sarcosine oxidase, alpha subunit family [Burkholderia multivorans
ATCC 17616]
gi|189337786|dbj|BAG46855.1| sarcosine oxidase alpha subunit [Burkholderia multivorans ATCC
17616]
Length = 1003
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
F N +F + R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D +I T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935
>gi|126740291|ref|ZP_01755980.1| probable aminomethyltransferase protein [Roseobacter sp. SK209-2-6]
gi|126718746|gb|EBA15459.1| probable aminomethyltransferase protein [Roseobacter sp. SK209-2-6]
Length = 790
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 95/299 (31%), Gaps = 58/299 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE---------- 62
+V G A +Q ++ ++ L +A+ G ++ + ++ E
Sbjct: 464 EVTGPDAEELMQLCVSRNMKKLSVGQVVYTAMCYEHGGMIDDGTVYRLGETNFRWIGGND 523
Query: 63 -DTFILE---------------IDRSKRDSLIDKLLFYKLRSNV------IIEIQPINGV 100
L+ D+ ++ + L S + ++ +
Sbjct: 524 TSGLWLQEQAGKRGLNVWVRNSTDQLHNIAVQGRHSREIL-SRIFWTPPQQPAVEELPWF 582
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLH--------------RTWGHNEK---IASDIKT 143
L+ + + +S + R + L + R W ++ ++
Sbjct: 583 RLTVARVGDVAGTSVVISRTGYSGELGYEIFCHPKDAVEIFDRVWEEGQEFGITPLGLEA 642
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LRI G++ ++F T P +A + + + +IG+ + + + ++
Sbjct: 643 LDMLRIEGGLIFAGSEFDDQTD-PFEAGIGFTVPLKSMEDDFIGR--TAVEERKAHPHRK 699
Query: 204 PMIITGTDD-LPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMAL 257
+ +P G + ++G + + K +A+ R+ I + +
Sbjct: 700 LVGFEVEGGTIPAPGDCVRIGRAQVGEITSAMKSPILGKVIALGRVSTTHAEIGTEIEI 758
>gi|307946364|ref|ZP_07661699.1| glycine cleavage T protein [Roseibium sp. TrichSKD4]
gi|307770028|gb|EFO29254.1| glycine cleavage T protein [Roseibium sp. TrichSKD4]
Length = 228
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A F Q + D+ + + I +G IL ++ K+ E+ F L +
Sbjct: 66 VEITGPDAARFTQMLTPRDLSNMSVGQCKYVLITNAEGGILNDPILLKLGENHFWLSLAD 125
Query: 72 S 72
S
Sbjct: 126 S 126
>gi|323530100|ref|YP_004232252.1| sarcosine oxidase subunit alpha family [Burkholderia sp. CCGE1001]
gi|323387102|gb|ADX59192.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. CCGE1001]
Length = 1000
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 83/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ E ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLGEQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99
+ ++ L ++R V+ ++ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCHDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVLLHRTWGHN-------EKIASDIKTY---- 144
++ +E T + ++ R S + L + E + + Y
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRVSFSGELAYEVNVPANVGRAVWEALMAAGAEYDITP 845
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLADDPTFVIPEGSQIVAG 928
>gi|209546018|ref|YP_002277908.1| sarcosine oxidase subunit alpha [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538875|gb|ACI58808.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 984
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 63/302 (20%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL I L AR +L G I S+ +
Sbjct: 645 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLALGKARYGIMLREDGFIYDDGTTSRFGD 704
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
+ F + + ++ L F +++ P + +L+ +
Sbjct: 705 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAIAGPKSRAILAEIVD 764
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160
S+++F + R G +I+ + +EL + G + D
Sbjct: 765 EDLSDAAFPFMSARKVSLFGGRLEGRLFRISFSGELAYELAVPAGYGESVADAVMASGEK 824
Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ T+ P D + +S TK +IG+ +++R
Sbjct: 825 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSSTKPDFIGKAMLAREG 882
Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241
++ R R + + + +GS IL + G + LA+
Sbjct: 883 LQDPERPRLVGVKPLNPASGFRTGSHILAEGAAATLENDQGYISSSAFSPTLGHTIGLAL 942
Query: 242 AR 243
R
Sbjct: 943 VR 944
>gi|325526210|gb|EGD03841.1| sarcosine oxidase alpha subunit family protein [Burkholderia sp.
TJI49]
Length = 543
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 53/326 (16%), Positives = 99/326 (30%), Gaps = 77/326 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 206 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 265
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 266 MTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVCQDIDF 325
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 326 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 384
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P+D M G+ ++G+ +SR
Sbjct: 385 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGVVAKSKDFLGKRSLSRSDTA 440
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI---------GTLGVVV------GKKALA 240
RK+ + + D+ + P G+ I+ D ++ G + ALA
Sbjct: 441 KQGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTTEPTPMIGHVTSSYYSPILKRSIALA 500
Query: 241 IAR--IDKVDH----AIKKGMALTVH 260
+ + +DK+ + G +T
Sbjct: 501 VVKGGLDKLGESVVIPLANGKRITAK 526
>gi|300124013|emb|CBK25284.2| Aminomethyltransferase [Blastocystis hominis]
Length = 390
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 59/313 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65
S+ IK GK + FL+ ++ +D+ +L R + + G I+ +I+ + +
Sbjct: 73 SHMGQIKWTGKDRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNAGDYHYE 132
Query: 66 -------------------------------------ILEIDRSKRDSLIDKLLFYKLRS 88
++ + + +++ + +
Sbjct: 133 VVNGACKYGDMEHFKKEMAKFQAEGKEVQMEYLGDIGLIALQGAMAPAVLRRFTEF---- 188
Query: 89 NVI---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139
+V I++ +N V I SI L+ E +
Sbjct: 189 DVTKMPFMTGQDIKVGGVNCRVTRCGYTGEDGYEVQIPAADSIP--LVKEILKEKEVLPC 246
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ LR+ G+ TD + LM ++ G +IG + + ++
Sbjct: 247 GLGARDSLRLEAGLCLYGTDLSTAVSPVEGTLMWTISKQRRADGGFIGHKAI--MERMKT 304
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
K+ + G+ I ++ +G + +L A+ I K H +
Sbjct: 305 CEKKRVGFMVQGAPARHGAKIYSNGELVGEITSGTLSPSLKKPVAMGYIKKGLHTAGTQV 364
Query: 256 ALTVHGVRVKASF 268
+ V + A
Sbjct: 365 EVEVRNKKYPAVV 377
>gi|300121816|emb|CBK22390.2| unnamed protein product [Blastocystis hominis]
Length = 452
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 59/313 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF- 65
S+ IK GK + FL+ ++ +D+ +L R + + G I+ +I+ + +
Sbjct: 135 SHMGQIKWTGKDRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNAGDYHYE 194
Query: 66 -------------------------------------ILEIDRSKRDSLIDKLLFYKLRS 88
++ + + +++ + +
Sbjct: 195 VVNGACKYGDMEHFKKEMAKFQAEGKEVQMEYLGDIGLIALQGAMAPAVLRRFTEF---- 250
Query: 89 NVI---------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139
+V I++ +N V I SI L+ E +
Sbjct: 251 DVTKMPFMTGQDIKVGGVNCRVTRCGYTGEDGYEVQIPAADSIP--LVKEILKEKEVLPC 308
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ LR+ G+ TD + LM ++ G +IG + + ++
Sbjct: 309 GLGARDSLRLEAGLCLYGTDLSTAVSPVEGTLMWTISKQRRADGGFIGHKAI--MERMKT 366
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKKGM 255
K+ + G+ I ++ +G + +L A+ I K H +
Sbjct: 367 CEKKRVGFMVQGAPARHGAKIYSNGELVGEITSGTLSPSLKKPVAMGYIKKGLHTAGTQV 426
Query: 256 ALTVHGVRVKASF 268
+ V + A
Sbjct: 427 EVEVRNKKYPAVV 439
>gi|119505803|ref|ZP_01627870.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
gi|119458370|gb|EAW39478.1| aminomethyl transferase family protein [marine gamma
proteobacterium HTCC2080]
Length = 389
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
I++ G A F Q + DV P R L I+ ++ ++EE+ F L
Sbjct: 77 IEISGPDAAAFTQLLTPRDVENCPVGRCRYVIFLDENAGIVNDAVLFRLEENRFWL 132
>gi|78061338|ref|YP_371246.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia
sp. 383]
gi|77969223|gb|ABB10602.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia
sp. 383]
Length = 1003
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P+D M G+ ++G+ ++R
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGVVAKSKDFLGKRSLARSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ +
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935
>gi|238014916|gb|ACR38493.1| unknown [Zea mays]
Length = 357
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 54/270 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G+ AIPFL++++ ADV L + QG + +I+K+ + L ++
Sbjct: 39 LSLKGRGAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNA 98
Query: 72 SKRDSLIDKL---------------------------------------------LFYKL 86
RD + + Y
Sbjct: 99 GCRDKDLAHIEAHMEAFNKKGGDVKWHIHDDRSLLALQGPLAAPTLQLLTKEDLSKMY-- 156
Query: 87 RSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
S+ I+I + + E F S + +A+ +L R+ G +
Sbjct: 157 FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTG--LGA 214
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRK 202
LR+ G+ D I P +A + G +G ++G +V+ + +
Sbjct: 215 RDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGADVILKQLQEGPKIR 273
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
R ++T + IG +
Sbjct: 274 RVGMVTQGPPARSHSELVSGSGERIGEVTS 303
>gi|221200289|ref|ZP_03573331.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD2M]
gi|221205968|ref|ZP_03578982.1| putative pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2]
gi|221173980|gb|EEE06413.1| putative pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2]
gi|221179630|gb|EEE12035.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD2M]
Length = 1003
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSFIDERFSIADVLLHR------------TWGHNEKIASDIKTYHE----------- 146
F N +F + V R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGVRARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D +I T+
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQISTV 935
>gi|170737490|ref|YP_001778750.1| sarcosine oxidase alpha subunit family protein [Burkholderia
cenocepacia MC0-3]
gi|169819678|gb|ACA94260.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia
MC0-3]
Length = 1003
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 84/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ +
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAV 935
>gi|310816085|ref|YP_003964049.1| glycine cleavage system T protein [Ketogulonicigenium vulgare Y25]
gi|308754820|gb|ADO42749.1| glycine cleavage system T protein [Ketogulonicigenium vulgare Y25]
Length = 371
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 82/275 (29%), Gaps = 52/275 (18%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
DVL L R + G IL L+ D + + ++ + +++ I L + S+
Sbjct: 83 DVLALQPGRQRYGLLTNAAGGIL-DDLMFANRGDHYYVVVNAACKETDIAHLTAHL--SD 139
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDE-----RF------------------------ 120
V I + +L+ + I RF
Sbjct: 140 VADVIPVTDRALLALQGPEAEAVLEAIVPGTAAMRFMDVAIFGDLWISRSGYTGEDGYEI 199
Query: 121 ----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-- 174
+AD + + + LR+ G+ D +T P +A +
Sbjct: 200 SLPEDLADAFARKLLADPRVLPIGLGARDSLRLEAGMCLYGHDIDTTTS-PVEAGLTWAI 258
Query: 175 -----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGT 229
G G + G + R R ++ G P++ D IG
Sbjct: 259 QKSRRTGGA--RAGGFPGAARILHELEHGPARLRVGLLPEGRAPLREGVPLVEDGAVIGQ 316
Query: 230 LGVV----VGKKALAIARIDKVDHAIKKGMALTVH 260
+ G++ +A+ + A +G LT
Sbjct: 317 ITSGGFSPSGERPIAMGYVPTPHAA--EGTPLTAE 349
>gi|307326389|ref|ZP_07605585.1| sarcosine oxidase, alpha subunit family [Streptomyces
violaceusniger Tu 4113]
gi|306888052|gb|EFN19042.1| sarcosine oxidase, alpha subunit family [Streptomyces
violaceusniger Tu 4113]
Length = 974
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A FL + T L +AR + P G I + ++EE +
Sbjct: 637 STLGKIEIWGADAGEFLNRVYTNAFKKLKPGMARYGVMCKPDGMIFDDGVTLRLEETRYF 696
Query: 67 LEIDRSKRDSLIDKL 81
+++D L
Sbjct: 697 TTTTTGGAAAVLDWL 711
>gi|17548269|ref|NP_521609.1| sarcosine oxidase subunit alpha [Ralstonia solanacearum GMI1000]
gi|17430515|emb|CAD17199.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 1028
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 691 STLGKIDIQGPDAVKLLNWMYTNPWGKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 750
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L ++R V+ I+
Sbjct: 751 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 810
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 811 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 869
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I PHD M ++ TK C +G+ ++R
Sbjct: 870 PYGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMG--GMVAKTKDC-LGKRSLTRSDTA 925
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + D + P G+ I+T+ ++
Sbjct: 926 KEGRKQFVGLLTDDAQFVLPEGAQIVTNGTQV 957
>gi|67903334|ref|XP_681923.1| hypothetical protein AN8654.2 [Aspergillus nidulans FGSC A4]
gi|40741498|gb|EAA60688.1| hypothetical protein AN8654.2 [Aspergillus nidulans FGSC A4]
gi|259483127|tpe|CBF78245.1| TPA: N,N-dimethylglycine oxidase, putative (AFU_orthologue;
AFUA_8G06470) [Aspergillus nidulans FGSC A4]
Length = 948
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A+ LQ + T DV + + +L G I ++++ T+ +
Sbjct: 606 VSGPGAVALLQGLGTVDVD-VRPGTIVYALLLNENGGIYSDVFVTRLGSFTYQI 658
>gi|195339921|ref|XP_002036565.1| GM18702 [Drosophila sechellia]
gi|194130445|gb|EDW52488.1| GM18702 [Drosophila sechellia]
Length = 405
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 141 MKEQDMGIMKTAVDNFKSQG--KDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
SSFI I +V + R E + +
Sbjct: 199 QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESRQAQKLTESLLESGVLKLAGLGA 258
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D + P +A + L ++ + + G +V+ +
Sbjct: 259 RDSLRLEAGLCLYGSDI-DAKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 315
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I + ++G +
Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGEQVGQVTSGC 351
>gi|86281958|gb|ABC91021.1| aminomethyltransferase protein [Rhizobium etli CFN 42]
Length = 356
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ S +D+
Sbjct: 49 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKDA 107
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 108 DLAHLRAHISDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 167
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A+ + R H + A + LR+ G+ D
Sbjct: 168 VSRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 227
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G + G + R+R + + P G
Sbjct: 228 TTS-PVEAALEWAMPKARRAGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 285
Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D EIG + V G A+ + + + V S
Sbjct: 286 HARLYADAEGQTEIGEVTSGGFGPSVDGPVAMGYVPVSHAAPGTLIYAEVRGKYLPVTIS 345
>gi|289674454|ref|ZP_06495344.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. syringae FF5]
Length = 360
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGVQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|167041189|gb|ABZ05947.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_001L24]
Length = 781
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ LS ++ G + +Q +T +V L SA+ G ++ I ++ +
Sbjct: 448 AIDLSPLRKFEIMGPDSENLMQHALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 507
Query: 63 DTF 65
D F
Sbjct: 508 DNF 510
>gi|254249935|ref|ZP_04943255.1| hypothetical protein BCPG_04816 [Burkholderia cenocepacia PC184]
gi|124876436|gb|EAY66426.1| hypothetical protein BCPG_04816 [Burkholderia cenocepacia PC184]
Length = 1003
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + D+ + P G+ I+ D ++
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQV 932
>gi|107025575|ref|YP_623086.1| sarcosine oxidase alpha subunit family protein [Burkholderia
cenocepacia AU 1054]
gi|116693242|ref|YP_838775.1| sarcosine oxidase alpha subunit family protein [Burkholderia
cenocepacia HI2424]
gi|105894949|gb|ABF78113.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia
AU 1054]
gi|116651242|gb|ABK11882.1| sarcosine oxidase, alpha subunit family [Burkholderia cenocepacia
HI2424]
Length = 1003
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGVVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + D+ + P G+ I+ D ++
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQV 932
>gi|330977310|gb|EGH77263.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 211
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGVQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|260463580|ref|ZP_05811779.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
gi|259030671|gb|EEW31948.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
Length = 982
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 13/149 (8%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + LP AR +L G +L +++ E+ F
Sbjct: 650 STLGKIDVQGPDAAIFLDRVYANGFAKLPVGRARYGVMLRDDGIVLDDGTTTRLAENRFF 709
Query: 67 LEIDRSKRDSLIDKLLFY------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF 120
+ +K ++ +L F LR V + +S ++ + +
Sbjct: 710 MTTSTAKAADVLSRLEFLLDAAWPDLR--VAVTSVSDEWAAMSVAGPNSRAILAAAFPAL 767
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRI 149
+++ L + LRI
Sbjct: 768 DVSNAALPHM-----GLLESEWEGRALRI 791
>gi|158422794|ref|YP_001524086.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571]
gi|158329683|dbj|BAF87168.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571]
Length = 1002
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 83/298 (27%), Gaps = 65/298 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I L L R +L G + +++++ D F
Sbjct: 661 STLGKIEVVGPDAAEFLNRIYPNAWLKLEPGRCRYGLMLKEDGFVFDDGVVARVAPDRFH 720
Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQEHT-------FSNSSF 115
+ ++ + Y V + V++
Sbjct: 721 VTTTTGGAARVLAHMEDYLQTEWPDLKVFVTSTSEQWAVIALQGPKAREVLAPFIEGIDL 780
Query: 116 IDERFSIADVLLHRTWGHNEKI-------------------------------------A 138
E F + R G ++
Sbjct: 781 SPEAFPHMAMRTGRILGVPTRLFRVSFTGELGFEINVPTDYARTVWEALYARGAEFGITP 840
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P D + +S K ++G+ ++R
Sbjct: 841 YGTETMHVLRAERGFIIVGQD-TDGTVTPDDLGLG--GMVSKQKPDFVGKRSLTRPDMLL 897
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD-DIEI-----GTLGVVVGK------KALAIA 242
RK+ + + D L G+ I+ D + + G + ALA+
Sbjct: 898 PDRKQLVGLLSEDSRTLLEEGAQIVADVNQPVPMTMLGHVTSSYDSAACGRPIALALV 955
>gi|320534459|ref|ZP_08034932.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133326|gb|EFW25801.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 168
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDTFIL 67
+ + V G + +L + + + TL + +L QG I L + + T L
Sbjct: 23 RDVVTVTGPDRLSWLTTLSSQVLTTLEPGDGGAETLLLDAQGHITH-ALAALDDGLTLWL 81
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ + L L + V + +P + + + + D
Sbjct: 82 VTEAGNGEDLATFLDSMRFMLRVEVAERPDVMALGALGEGLEALAQAARD 131
>gi|256419645|ref|YP_003120298.1| glycine cleavage system aminomethyltransferase T [Chitinophaga
pinensis DSM 2588]
gi|256034553|gb|ACU58097.1| glycine cleavage system T protein [Chitinophaga pinensis DSM 2588]
Length = 362
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 88/313 (28%), Gaps = 69/313 (22%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE-DTFILEIDRS 72
+ G+ A+ +Q + T D L A+ S + +G I+ L+ IEE + ++L ++ S
Sbjct: 56 LKGEHALDLIQRVTTNDASKLTVGKAQYSCLPNEEGGIVDDLLVYCIEENNVYMLVVNAS 115
Query: 73 ----------------------------------KRDSLIDKLL-------FYKLRSNVI 91
S++ L Y +
Sbjct: 116 NIEKDWNWISKFNTKGVEMHNISDKTCLLAIQGPNAASILQPLTTVELVNLKYYTFAK-- 173
Query: 92 IEIQPINGVVLSWNQEHTFSNSS-FIDERFSIADVLLHRTW---GHNEKIASDIKTYHEL 147
E + VV+S + +++ AD + + G + L
Sbjct: 174 GEFAGVPNVVISATGYTGAGGIEIYFEDKDGAADKIWDAIFEVGGPKGLKPIGLAARDTL 233
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR-----NIIRK 202
R+ G D T P +A + + TK E SR + + RK
Sbjct: 234 RLEMGFCLYGNDI-DDTTSPMEAGLGWI--TKFTK------EFTSREKFEQQKAAGVTRK 284
Query: 203 RPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGM 255
+P I IG + L + + +
Sbjct: 285 LVGFEMVDKGIPRHDYEIKDASGQVIGKVTSGTQSPSMQKAIGLGYVNTEFAAQDSEIFI 344
Query: 256 ALTVHGVRVKASF 268
A+ ++ K
Sbjct: 345 AVRDKLLKAKVVK 357
>gi|294939168|ref|XP_002782345.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239893931|gb|EER14140.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 160
Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V GK + F++++ D+ L R + I TPQ I+ +I E D + ++
Sbjct: 4 LRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICN-EGDHLYVVLNA 62
Query: 72 SKRDSLIDKL-LFYKLRSNVIIEIQPINGVVL 102
S + + + +V +E P ++
Sbjct: 63 SNTEKDMKHIVSRGDFDGDVSLEPHPEASLIA 94
>gi|254513725|ref|ZP_05125788.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
gi|221531955|gb|EEE35012.1| aminomethyl transferase family protein [Rhodobacteraceae bacterium
KLH11]
Length = 381
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 29/56 (51%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G+ A + + T +V + + ++IL +GK + +I ++ +T+++
Sbjct: 62 VHVVGEDAAYVIDRVTTRNVEKIMPGRSIYASILNAEGKFVDDCIIYRLSVNTWLV 117
>gi|40063519|gb|AAR38319.1| oxidoreductase, FAD-binding [uncultured marine bacterium 581]
Length = 814
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G+ A L I +V + + L G I I+++ E+ F
Sbjct: 486 LSSFAKFRCEGRDAADVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544
Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98
++ L L ++ ++ + P +
Sbjct: 545 LVVSAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141
G + ++E R + L + E + +
Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199
+ LR+ + D P +A + + I K G +IG+E + R Q + +
Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720
Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
R+ + + + L PI D +G + G L
Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770
>gi|18645113|gb|AAL76414.1| glycine cleavage system T protein, putative [uncultured marine
proteobacterium]
Length = 814
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G+ A L I +V + + L G I I+++ E+ F
Sbjct: 486 LSSFAKFRCEGRDAADVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544
Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98
++ L L ++ ++ + P +
Sbjct: 545 LVVSAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141
G + ++E R + L + E + +
Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199
+ LR+ + D P +A + + I K G +IG+E + R Q + +
Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720
Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
R+ + + + L PI D +G + G L
Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770
>gi|73538653|ref|YP_299020.1| sarcosine oxidase, alpha subunit, heterotetrameric [Ralstonia
eutropha JMP134]
gi|72121990|gb|AAZ64176.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Ralstonia
eutropha JMP134]
Length = 1003
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 78/273 (28%), Gaps = 54/273 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E F+
Sbjct: 666 STLGKIDIQGPDAVTLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQPI--- 97
+ ++ L K+R V+ ++
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPHMKVRLSSVTDHWATFAVVGPNSRKVLRKVCEDIDF 785
Query: 98 -----------NGVVLSWNQEH---TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
NG+V +FS + DI
Sbjct: 786 ANDAFPFMSYRNGIVAGAKARVMRISFSGELAYEVNVPANAGRAAWEALMTAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGVVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229
RK+ + + D + P G+ IL + T
Sbjct: 902 EGRKQFVGLLTDDAEFVLPEGAQILAPGTRVST 934
>gi|260905605|ref|ZP_05913927.1| putative aminomethyltransferase protein [Brevibacterium linens BL2]
Length = 406
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
I+V G A F+ +IT D +P AR + G IL ++ ++ D F
Sbjct: 66 IQVKGPDAEAFVNYVITRDATKIPVMRARYVILCNEAGGILNDPILLRVAIDEFW 120
>gi|330720821|gb|EGG99025.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC2047]
Length = 319
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+S+ I V G + L+ ++ D+ TLP R S + +G + ++ + E +
Sbjct: 1 MSHMGQIIVSGPTVSADLEKLLPIDLDTLPVNQQRYSLLTNQKGGVRDDVMVCRRGEADY 60
Query: 66 ILEIDRSKRDSLIDKLLFY 84
+L ++ + + L +
Sbjct: 61 LLVVNAACKSDDYAYLRAH 79
>gi|312092130|ref|XP_003147229.1| hypothetical protein LOAG_11663 [Loa loa]
gi|307757604|gb|EFO16838.1| hypothetical protein LOAG_11663 [Loa loa]
Length = 67
Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 216 SGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272
+GS + ++ G + GKK LA+ I + ++ P W+
Sbjct: 3 TGSLVNSEGRRAGKVIACTGKKGLALVPISRNTSPTH----FQSMNEDIEIFLPPWW 55
>gi|111018820|ref|YP_701792.1| sarcosine oxidase [Rhodococcus jostii RHA1]
gi|110818350|gb|ABG93634.1| sarcosine oxidase [Rhodococcus jostii RHA1]
Length = 954
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 89/271 (32%), Gaps = 61/271 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A L I T + TL + R + G ++ + ++++D F
Sbjct: 617 STLGKIDVQGPDAGVLLDMIYTNMMSTLKVGMVRYGVMCGVDGMVIDDGTVMRLDDDRFQ 676
Query: 67 LEIDRSKRDSLID-----------KLLFYKLR------------------SNVIIEIQPI 97
+ ++D L ++R +VI E+ P
Sbjct: 677 VFTTTGGAAKILDWMEEWLQTEWPHL---RVRLTSVTEQWATFPVVGPRSRDVIGEVFPD 733
Query: 98 NGV------VLSWNQEHTFSNSSFIDERFSIADVL--------------LHRTWGHNEK- 136
V ++W + + R S + L R EK
Sbjct: 734 LDVTNDAFGFMAWR-DTSLGGVHVRVARISFSGELAFEVNVDGWHAPAVWARLIAAGEKF 792
Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+T H LR G D T+ P D M +S K +IG+ +R
Sbjct: 793 DITPYGTETMHVLRAEKGYPIIGQD-TDGTVTPQDLGMSW--AVSKKKRDFIGKRSFTRA 849
Query: 195 QHRNIIRKRPMIITGTD--DLPPSGSPILTD 223
+++N +RK + + D + P G+ I+ +
Sbjct: 850 ENQNPLRKEFVGLLPLDKQTVLPEGAQIIEE 880
>gi|110680999|ref|YP_684006.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Roseobacter denitrificans OCh 114]
gi|109457115|gb|ABG33320.1| glycine cleavage T-protein (aminomethyl transferase) family protein
[Roseobacter denitrificans OCh 114]
Length = 790
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 68/313 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q I T ++ TL +A+ G ++ + ++ +D F
Sbjct: 459 LSPLRKFEIMGPDAEALCQYIFTRNMKTLAVGGVVYTAMCYEHGGMIDDGTVFRLAKDNF 518
Query: 66 -IL---EIDRSKRDSLIDKLLFYKLRSNVII--EIQPINGVVL------------SWNQE 107
+ + +KL V+I ++ V + W
Sbjct: 519 RWIGGSDYGGEWIREQAEKLGL-----KVLIRSSTDQLHNVAVQGPESRDLLRKLVWTAP 573
Query: 108 H------------------TFSNSSFIDERFSIADVLLHRTWGHNEKIAS---------- 139
H + + F+ R L + H + A
Sbjct: 574 HNPEFDQLGWFRFTPARLRDETGTPFVVSRTGYTGELGYEVMCHPKDCAEIFDAIWEAGQ 633
Query: 140 -------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
++ +RI G++ DF T P +A + + +IG++ +
Sbjct: 634 AHGIKPMGLEALDMVRIEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKTDDFIGRDALI 692
Query: 193 RIQHRNIIRKRPMIITGTDDLPPS-GSPILTDDIEIGTLGVVVG----KKALAIARIDKV 247
R + ++ + + ++ G + ++G + + K +A+AR+D V
Sbjct: 693 R--RKENPMRKLVGLEIDSNVDVGHGDCLHVGRAQVGEVTSSMRSPLLGKNIALARVD-V 749
Query: 248 DHAIKKGMALTVH 260
HA+ G AL V
Sbjct: 750 AHAV-AGTALEVG 761
>gi|226502434|ref|NP_001145825.1| hypothetical protein LOC100279332 [Zea mays]
gi|195639442|gb|ACG39189.1| aminomethyltransferase [Zea mays]
gi|219884573|gb|ACL52661.1| unknown [Zea mays]
Length = 409
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 54/270 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ + G+ AIPFL++++ ADV L + QG + +I+K+ + L ++
Sbjct: 91 LSLKGRGAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNA 150
Query: 72 SKRDSLIDKL---------------------------------------------LFYKL 86
RD + + Y
Sbjct: 151 GCRDKDLAHIEAHMEAFNKKGGDVKWHIHDDRSLLALQGPLAAPTLQLLTKEDLSKMY-- 208
Query: 87 RSNVI-IEIQPINGVV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKT 143
S+ I+I + + E F S + +A+ +L R+ G +
Sbjct: 209 FSDFKMIDINGYACFLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTG--LGA 266
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRK 202
LR+ G+ D I P +A + G +G ++G +V+ + +
Sbjct: 267 RDSLRLEAGLCLYGNDME-QHITPVEAGLSWAIGKRRRAEGGFLGADVILKQLQEGPKIR 325
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
R ++T + IG +
Sbjct: 326 RVGMVTQGPPARSHSELVSGSGERIGEVTS 355
>gi|302680791|ref|XP_003030077.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8]
gi|300103768|gb|EFI95174.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8]
Length = 392
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 75/275 (27%), Gaps = 69/275 (25%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARG----SAILTPQGKILLYFLISKIE 61
L + + G A +LQ + + D+ TL + + L
Sbjct: 162 LEGWGLLALQGPEAAGYLQTLTSFDLRTLTFGKSAFVPIDGGFN------LHVARGGYTG 215
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS 121
ED F + I + + L
Sbjct: 216 EDGFEISIPPDQTYDVAQLLSK----------------------------------PDNV 241
Query: 122 IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLT 181
L R LR+ G+ +D T P +A + + G
Sbjct: 242 QLTGLGAR---------------DSLRLEAGMCLYGSDL-DETTTPIEAGLGWVIGKERK 285
Query: 182 K-GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTD---DIEIGTLGVVVG-- 235
K G +IG E V + R+R +I G+ IL IG + +
Sbjct: 286 KTGGFIGTEGVLKHIQEGPPRRRVGLIV-EGAPARHGAQILESPTMSEAIGVVTSGIPSP 344
Query: 236 --KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
K +A+ + H +A+ V G KA
Sbjct: 345 TLGKNIAMGYVKNGLHKKGTELAVAVRGKARKAVI 379
>gi|163733988|ref|ZP_02141429.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149]
gi|161392524|gb|EDQ16852.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149]
Length = 975
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T TL R +L G ++ +++ E
Sbjct: 640 CDVSTLGKIDIQGPDAGRFLDFVYTNTFSTLKVGCVRYGLMLREDGHVMDDGTTARLAET 699
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 700 HFLMTTTTAAAGPVMRHLEF 719
>gi|330952091|gb|EGH52351.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae Cit 7]
Length = 360
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|28572801|ref|NP_789581.1| aminomethyltransferase gcvT [Tropheryma whipplei TW08/27]
gi|28410934|emb|CAD67319.1| aminomethyltransferase gcvT [Tropheryma whipplei TW08/27]
Length = 356
Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 52/216 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAI-----ITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
LS+ + I V G +A + +T + A+ + IL QG I ++ +I
Sbjct: 51 LSHMAEIFVSGVNA-----GLELDIALTGHFSDMTCGRAKYTLILNEQGGIEDDLIVYRI 105
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
++ +++ + R + L S++ E I+ V + + + F
Sbjct: 106 DDKNYMVVANAINRKKVFSLLRDRVHTSDIKDETDSISLVAVQGPESESLIRDLFHESGN 165
Query: 116 -----------------------IDERFSIAD-------------VLLHRTWGHNEKIAS 139
I R V + R
Sbjct: 166 LRYFSHRCYPHGGTDRSEKLSCSIVARTGYTGEDGFEIFTPNDSVVSIWRALIERGATPC 225
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ + LRI G+ + + + P A ++
Sbjct: 226 GLAARNTLRIEAGMPLYGHEL-RADLNPVQAGLERF 260
>gi|90418125|ref|ZP_01226037.1| dimethylglycine dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
gi|90337797|gb|EAS51448.1| dimethylglycine dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
Length = 837
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 76/316 (24%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A +L ++ + +LTP G + F + K +++ L
Sbjct: 522 VSGPGAAAWLDGLLANRIPK-TPGRVALCHLLTPVGGVRSEFTVYKAGAESYYLV--SGG 578
Query: 74 RDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT--- 130
ID +++ + P +G V H R L RT
Sbjct: 579 AYEGIDH--------DILQKALPGDGSVAMQPVTHALGVLVVAGPRSREVLAKLTRTDLS 630
Query: 131 -----WGHNEKIASDIKTYHELRI----NHGI----------------VDPNTDF----- 160
W + ++ LR+ G ++ +F
Sbjct: 631 NAAFPWLTGQPLSVGPVACTALRVNFVGELGWELHHPIEMQNALYDLLMEAGAEFGIRPF 690
Query: 161 --------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
L ++ ++ + +KG +IG++ V + +
Sbjct: 691 GIRAMGAMALEKSYRQIPRELSIEYNAFESGLERF--VHPSKGDFIGRDAVVAARENGLR 748
Query: 201 -RKRPMIITGTDDLPPSGS-PILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIK 252
+ + + G D GS P+ D + +G + G LA+A +D
Sbjct: 749 WQFATLEVHGVTDADARGSEPVYADGVLVGRVT--NGGFGWRVGKSLALAMLDPAHAGEG 806
Query: 253 KGMALTVHGVRVKASF 268
+ + + G R A+
Sbjct: 807 TRLTIRILGTRHDATV 822
>gi|260436058|ref|ZP_05790028.1| glycine cleavage system T protein [Synechococcus sp. WH 8109]
gi|260413932|gb|EEX07228.1| glycine cleavage system T protein [Synechococcus sp. WH 8109]
Length = 367
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS-----KIE 61
S+ +++ G + LQ +I +D+ + A S +L +G I ++ E
Sbjct: 51 SHMGVLRLEGANPKDALQRLIPSDLHRIGPGEACYSVLLNERGGIRDDLIVYDCGAIDAE 110
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT 109
+L I+ + DS + + + + +GV+L+
Sbjct: 111 RGALVLVINAACADSDTAWIREQMEPAGLTLTDIKKDGVLLALQGPEA 158
>gi|229589819|ref|YP_002871938.1| putative aminomethyltransferase [Pseudomonas fluorescens SBW25]
gi|229361685|emb|CAY48566.1| putative aminomethyltransferase [Pseudomonas fluorescens SBW25]
Length = 376
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
G A LQ T D+ L + +++L GK + ++ + + F++
Sbjct: 63 GPHAESLLQWATTRDIAKLYPGKSVYASMLDEDGKFVDDCIVYRTGPNAFMV 114
>gi|330943299|gb|EGH45684.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 360
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|302184895|ref|ZP_07261568.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. syringae 642]
Length = 360
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|224006530|ref|XP_002292225.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335]
gi|220971867|gb|EED90200.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335]
Length = 418
Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 37/325 (11%), Positives = 89/325 (27%), Gaps = 62/325 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ I+ G+ FL+ I+ D+ L S + G I+ +I+
Sbjct: 85 SLFDVSHMGQIRWRGRDRAAFLEKIVVGDIAGLSEGSGCLSLVTNVNGGIIDDTVITNAG 144
Query: 62 EDTFILEIDRSKRDSLIDK----------------------------------------- 80
D + ++ + + +
Sbjct: 145 -DYIYMVVNGATKFGDMKHFKEQMESFDGDVNMEYLEDSMQLLAIQGPGAAEAVSKLLPG 203
Query: 81 ---LLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKI 137
L + V + ++G ++ A + +
Sbjct: 204 AFDLTKMAFMTGVDTTLDGVDGCRITRCGYTGEDGFEIAMP-AEHAVSIASKLLSDPSVN 262
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTK---GCYIGQEVVSR 193
+ + LR+ G+ D P +A + + G + G ++G E + +
Sbjct: 263 PTGLGARDSLRLEAGLCLYGHDL-DENTNPIEATLGWTMGGPKSRRRTEGGFLGAEHILK 321
Query: 194 I--QHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGVVV------GKKALAIAR 243
+ + + RKR + I G + I + +IG + A+
Sbjct: 322 PDGKFQKVARKR-VGIKGMKAPAREHAEIFDANGETKIGEVTSGTFSPCLKAPIAMGYVE 380
Query: 244 IDKVDHAIKKGMALTVHGVRVKASF 268
+ + + + + +
Sbjct: 381 TELAKAGTEVNVQIRGKMQKAEIVR 405
>gi|206558479|ref|YP_002229239.1| glycine cleavage system aminomethyltransferase T [Burkholderia
cenocepacia J2315]
gi|238693128|sp|B4EF28|GCST_BURCJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|198034516|emb|CAR50381.1| aminomethyltransferase [Burkholderia cenocepacia J2315]
Length = 372
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|134294274|ref|YP_001118009.1| glycine cleavage system aminomethyltransferase T [Burkholderia
vietnamiensis G4]
gi|166221543|sp|A4JA71|GCST_BURVG RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134137431|gb|ABO53174.1| glycine cleavage system T protein [Burkholderia vietnamiensis G4]
Length = 372
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHALANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|330895731|gb|EGH28020.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 285
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A SA+L G ++ ++ E +
Sbjct: 50 SHMNVIDVLGRQARVWLRRLLANDVDKLKTPGRALYSAMLDESGGVIDDMIVYLTPE-GY 108
Query: 66 ILEIDRS 72
L ++ +
Sbjct: 109 RLVVNAA 115
>gi|326795674|ref|YP_004313494.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
mediterranea MMB-1]
gi|326546438|gb|ADZ91658.1| glycine cleavage T protein (aminomethyl transferase) [Marinomonas
mediterranea MMB-1]
Length = 978
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 44/109 (40%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S +++ G A F+ + T L P R + + QG ++ + +I +D
Sbjct: 645 IDVSTLGGLEIRGADAAEFINRMYTFAFLKQPVGKTRYAVLTNEQGVVIDDGVSCRIADD 704
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D++ ++ + + + ++I + + N +
Sbjct: 705 HFYVTATTSGVDAVFREMTKWNAQWRLDVDIANVTSAYSAVNVAGPLAR 753
>gi|304392639|ref|ZP_07374579.1| dimethylglycine dehydrogenase [Ahrensia sp. R2A130]
gi|303295269|gb|EFL89629.1| dimethylglycine dehydrogenase [Ahrensia sp. R2A130]
Length = 830
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 80/293 (27%), Gaps = 49/293 (16%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----- 68
+ G A +L+ IT + + +G+I+ + + ED F L
Sbjct: 522 LKGDGAADWLRQQITGGIPKV--GRLNLGYFADYKGRIVTEMSVIRHGEDDFTLMTAAVA 579
Query: 69 -----------IDRSKRDSLIDKLLFYKL-------RSNVIIEIQPINGVVLSW--NQEH 108
+ +L + + + +V+ I + W +Q+
Sbjct: 580 EWHDFEWLKKALPEDGSIALTNHSTEFAVLLVTGPTSRDVLSSIADEADLDAGWLTHQKA 639
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRINHGIVD 155
+ R S A L I + LR+ G
Sbjct: 640 KIAGVDCALARVSFAGELGWEIHAAFGDIPALYDAVLGAGAKPFGMFALDSLRLEKGYRT 699
Query: 156 PNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLP 214
D + MD + K ++G+ + + + + + M + D
Sbjct: 700 WKGDLSTDYTI-LEGGMDRF--VRWQKEDFVGKAAMETEKQQGVKKGFVTMTVDAGDFDA 756
Query: 215 PSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
P S I D +G RI+K LT G ++
Sbjct: 757 PYMSTIWNGDQVVGETTSGGWGH-----RINKSIALGVVQSDLTTPGTELEVE 804
>gi|296156315|ref|ZP_06839154.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. Ch1-1]
gi|295893821|gb|EFG73600.1| sarcosine oxidase, alpha subunit family [Burkholderia sp. Ch1-1]
Length = 1000
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G + + ++ + ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99
+ ++ L ++R V+ ++ Q I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ +E T + ++ R S + L W + DI
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAG 928
>gi|170694334|ref|ZP_02885488.1| glycine cleavage system T protein [Burkholderia graminis C4D1M]
gi|170140757|gb|EDT08931.1| glycine cleavage system T protein [Burkholderia graminis C4D1M]
Length = 372
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P G ++ ++ ED F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVGKLQIPGRALYSCMLNPDGGVIDDLIVYYFGEDHF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|251736945|gb|ACT10334.1| glycine cleavage system T protein [Sinorhizobium fredii]
Length = 387
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 85/316 (26%), Gaps = 58/316 (18%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I + G A L+ ++ DVL L R P+G IL +I+
Sbjct: 64 SHMGQIAIRPKSGRIADAALALEKLVPVDVLGLAEGRQRYGLFTNPEGGILDDLMIANRG 123
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQ--------------- 106
D L ++ + +D+ L L + + +V
Sbjct: 124 -DHLFLVVNAACKDADHAHLK-DGLGDACDVTLLDDRALVALQGPRAEAVLCELWADVAS 181
Query: 107 -------EHTFSNSSFIDERFSIADVLL--------------HRTWGHNEKIASDIKTYH 145
E + + I R R H + +A +
Sbjct: 182 MRFMDLAEADLHDVACIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARD 241
Query: 146 ELRINHGIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNII 200
LR+ G+ D T P +A ++ G + G + +
Sbjct: 242 SLRLKAGLCLYGNDIDTGTT-PIEAALEWAIQKSRRAGGERAGGFPGADRILAELAGGTD 300
Query: 201 RKRP-------MIITGTDDL-PPSGSPILTDDIEIGTLGVVVG-KKALAIARIDKVDHAI 251
R+R + G L +L + G G V A+ +
Sbjct: 301 RRRVGLKPEGRAPVRGGAKLFTDPDGTVLVGSVTSGGFGPSVDCPVAMGYVETAHARNGT 360
Query: 252 KKGMALTVHGVRVKAS 267
K + + + S
Sbjct: 361 KLFAEVRGKYLPITVS 376
>gi|85705597|ref|ZP_01036695.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
gi|85670022|gb|EAQ24885.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
Length = 811
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 23/130 (17%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+R+ G + D + P + +D + KG +IG+E + + RK+
Sbjct: 671 DSMRMEKGFMHWKADLITE-FDPFETALDRF--VKPEKGDFIGKEALLKRIEEG-PRKKL 726
Query: 205 MIITGTDDLPPS--GSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMA 256
+ + P+ G+ ++ D +GT+ G LA A ++ A
Sbjct: 727 VTLKVDATNAPAHGGASLMQDGKVVGTITS--GDWGHRVGMNLAYAFVE---------PA 775
Query: 257 LTVHGVRVKA 266
L V G ++
Sbjct: 776 LAVPGTKIDL 785
>gi|296444881|ref|ZP_06886843.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b]
gi|296257549|gb|EFH04614.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b]
Length = 382
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 39/265 (14%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE--EDTFILEIDR 71
+ G+ A L+ ++ AD+ L + R + +L G IL + +++ E+ +L ++
Sbjct: 69 LTGRGAARLLETLVPADLDGLEPQRTRYTQLLAEDGGILDDLMATRLPGREERLLLVVNA 128
Query: 72 SKRD---SLID----KLLFYKL-----------RSNVIIEI---QPINGVVLSWNQEHTF 110
+ ++ +L+ +L L R+ + + + W
Sbjct: 129 AGKEQDFTLLRQELPQLQLSVLSGRALLALQGPRAAATLSTILPGVEDAPFMGWLPAEYE 188
Query: 111 SNSSFI-------DERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
S F+ ++ F I A L R + + + + LR+ G+
Sbjct: 189 GASVFVSRSGYTGEDGFEISAPAYLATRLAERLLANEDVAPAGLAARDSLRLEAGLCLYG 248
Query: 158 TDFLPSTIFPHDALMDLLNGISLT-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS 216
D +T P +A + G +G + G + R+R ++ +
Sbjct: 249 HDI-DATTDPVEAGLIWSIGKRRREQGGFPGFARIRAAIDNGPARRRVGLLPQSKAPLRD 307
Query: 217 GSPILT-DDIEIGTLGVVVGKKALA 240
G+ + D +G + +LA
Sbjct: 308 GATLTAPDGRIVGRITSGGYSPSLA 332
>gi|298292964|ref|YP_003694903.1| sarcosine oxidase subunit alpha family [Starkeya novella DSM 506]
gi|296929475|gb|ADH90284.1| sarcosine oxidase, alpha subunit family [Starkeya novella DSM 506]
Length = 1011
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ I T L R +L G ++ ++ ++ ED F
Sbjct: 678 STLGKIEVVGPDAAEFMNRIYTNAWAKLEPGRLRYGVMLREDGFVMDDGVVGRLAEDRFH 737
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 738 VTTTTGGAPRVLAHMEDY 755
>gi|239816273|ref|YP_002945183.1| glycine cleavage system T protein [Variovorax paradoxus S110]
gi|239802850|gb|ACS19917.1| glycine cleavage system T protein [Variovorax paradoxus S110]
Length = 392
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A + ++ DV+ L R +L +G IL + +
Sbjct: 62 SHMGQLRLVGPDAAAAFETLMPVDVIDLAPGKQRYGLLLNDEGGILDDLMFFNEGHGSIF 121
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTF 110
+ ++ + + + I + K+ + ++ P + ++ +
Sbjct: 122 VIVNGACKVADIAHIQQ-KIGARCDVQPMPDHALLALQGPQAAA 164
>gi|229260087|ref|YP_469748.2| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CFN 42]
Length = 378
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 52/300 (17%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
+ A L++++ D+L L R G IL +I+ + +D + ++ S +D+
Sbjct: 71 EDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITHL-DDHLFVVVNASCKDA 129
Query: 77 LIDKLLFYK-------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFS-------- 121
+ L + L + +I +Q V + + F+D R
Sbjct: 130 DLAHLRAHISDQCDITLLNRALIALQGPRAVEVLAELWADVAAMKFMDVRHCRLHDVSCL 189
Query: 122 -------------------IADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
A+ + R H + A + LR+ G+ D
Sbjct: 190 VSRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARDSLRLEAGLCLYGNDIDT 249
Query: 163 STIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSG 217
+T P +A ++ G + G + R+R + + P G
Sbjct: 250 TTS-PVEAALEWAMPKARRAGGARAGGFPGSGRILSELENGAARRR-VGLKPEGKAPVRG 307
Query: 218 -SPILTD---DIEIGTLG------VVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
+ + D EIG + V G A+ + + + V S
Sbjct: 308 HARLYADAEGQTEIGEVTSGGFGPSVDGPVAMGYVPVSHAAPGTLIYAEVRGKYLPVTIS 367
>gi|218529909|ref|YP_002420725.1| sarcosine oxidase subunit alpha family [Methylobacterium
chloromethanicum CM4]
gi|218522212|gb|ACK82797.1| sarcosine oxidase, alpha subunit family [Methylobacterium
chloromethanicum CM4]
Length = 1008
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 20/205 (9%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++
Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS------FIDERF----- 120
+ ++ L F + +++Q + V W Q + +D F
Sbjct: 739 ANAARVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAGPRARDTLRRIVDPGFDLSNE 797
Query: 121 -----SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP---HDALM 172
+ ADV + +I+ + +EL + D + P
Sbjct: 798 AFPFLACADVTVGGIPARLFRISFSGELAYELAVPAAYGDAAWRAIMQAGLPYGITAYGS 857
Query: 173 DLLNGISLTKGCYIGQEVVSRIQHR 197
+ L+ + + KG G E+ + R
Sbjct: 858 EALSVMRIEKGHAAGAEINGQTTAR 882
>gi|167041907|gb|ABZ06646.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_133I24]
Length = 794
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ LS ++ G + +Q +T +V L SA+ G ++ I ++ +
Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520
Query: 63 DTF 65
D F
Sbjct: 521 DNF 523
>gi|167041609|gb|ABZ06356.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_009A22]
Length = 794
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ LS ++ G + +Q +T +V L SA+ G ++ I ++ +
Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520
Query: 63 DTF 65
D F
Sbjct: 521 DNF 523
>gi|167041157|gb|ABZ05916.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_001B09]
Length = 794
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
++ LS ++ G + +Q +T +V L SA+ G ++ I ++ +
Sbjct: 461 AIDLSPLRKFEIMGPDSENLMQYALTRNVKKLSIGQVSYSAMCYENGCMIDDGTIFRLGK 520
Query: 63 DTF 65
D F
Sbjct: 521 DNF 523
>gi|156053183|ref|XP_001592518.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980]
gi|154704537|gb|EDO04276.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 475
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTP-QGKILLYFLISKIEEDTFILEIDR 71
+ G A FLQ I A + L S +L P G I+ +I+++ + F + +
Sbjct: 132 RFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTNA 191
Query: 72 SKRDSLIDKL 81
R+ + L
Sbjct: 192 GCREKDLKYL 201
>gi|320659652|gb|EFX27215.1| putative aminomethyltransferase [Escherichia coli O55:H7 str. USDA
5905]
Length = 386
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISAAELIAS 119
>gi|320643035|gb|EFX12236.1| putative aminomethyltransferase [Escherichia coli O157:H- str.
493-89]
gi|320648492|gb|EFX17147.1| putative aminomethyltransferase [Escherichia coli O157:H- str. H
2687]
Length = 386
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISAAELIAS 119
>gi|291282041|ref|YP_003498859.1| putative aminomethyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|290761914|gb|ADD55875.1| Putative aminomethyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|320637474|gb|EFX07274.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|320653808|gb|EFX21882.1| putative aminomethyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320664422|gb|EFX31573.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
LSU-61]
Length = 386
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISAAELIAS 119
>gi|312195153|ref|YP_004015214.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EuI1c]
gi|311226489|gb|ADP79344.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EuI1c]
Length = 768
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 81/268 (30%), Gaps = 58/268 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A FLQ + + V P + +L + ++++ F L ++
Sbjct: 461 LAVTGPGAAAFLQRMCSNHVDR-PVGAVTYALLLDEGAGVRGDITVARLGPREFQLGVNS 519
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQEH----------TFSNSSF----- 115
S + L + ++V + +I V W ++ +F
Sbjct: 520 SL---DLAWLRAHA-PADVHVADITGGTCCVGVWGPAARDLLAPLTTLDLAHEAFGYFTA 575
Query: 116 ----IDE------RFSIADVLLHRTWGHNE-----------------KIASDIKTYHELR 148
+D R S L + E +A+ LR
Sbjct: 576 RRTHLDAVPVTMLRVSYVGELGWEVYASAELGPRLWDTLWAAGASVGAVAAGRSALTSLR 635
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
+ G D P+ A + ++L G ++G R R + +T
Sbjct: 636 LEKGYRAWGVDMTAQDD-PYSAGLGF--AVNLAHGDFVG-----RAALRPDGPRALCCLT 687
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVVV 234
D +P P+L D + +G +
Sbjct: 688 VDDGRTVPAGREPVLADGVPVGHVTSAA 715
>gi|15801036|ref|NP_287052.1| putative aminomethyltransferase [Escherichia coli O157:H7 EDL933]
gi|12514416|gb|AAG55663.1|AE005304_8 putative aminomethyltransferase [Escherichia coli O157:H7 str.
EDL933]
Length = 386
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISAAELIAS 119
>gi|15830542|ref|NP_309315.1| aminomethyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|168747334|ref|ZP_02772356.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|168754371|ref|ZP_02779378.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168760763|ref|ZP_02785770.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168767548|ref|ZP_02792555.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168773738|ref|ZP_02798745.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168781066|ref|ZP_02806073.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168788788|ref|ZP_02813795.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168799175|ref|ZP_02824182.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195935299|ref|ZP_03080681.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4024]
gi|208807412|ref|ZP_03249749.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208815307|ref|ZP_03256486.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208822807|ref|ZP_03263126.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209395879|ref|YP_002269770.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|217328553|ref|ZP_03444635.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254792302|ref|YP_003077139.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|261227105|ref|ZP_05941386.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255779|ref|ZP_05948312.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
FRIK966]
gi|13360748|dbj|BAB34711.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187770372|gb|EDU34216.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188018140|gb|EDU56262.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|189001179|gb|EDU70165.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189358139|gb|EDU76558.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189363108|gb|EDU81527.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189368703|gb|EDU87119.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189371434|gb|EDU89850.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189378233|gb|EDU96649.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727213|gb|EDZ76814.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208731955|gb|EDZ80643.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208738292|gb|EDZ85975.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209157279|gb|ACI34712.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|217318980|gb|EEC27406.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254591702|gb|ACT71063.1| putative aminomethyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|320192451|gb|EFW67093.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str.
EC1212]
gi|326338506|gb|EGD62333.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str.
1125]
gi|326345593|gb|EGD69333.1| Putative aminomethyltransferase [Escherichia coli O157:H7 str.
1044]
Length = 386
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISAAELIAS 119
>gi|114769460|ref|ZP_01447086.1| putative aminomethyltransferase protein [alpha proteobacterium
HTCC2255]
gi|114550377|gb|EAU53258.1| putative aminomethyltransferase protein [alpha proteobacterium
HTCC2255]
Length = 789
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G + Q I T ++ TL +A+ G ++ + ++ D F
Sbjct: 459 LSPLRKFEITGPDSEALCQYIFTRNMKTLGDGHVVYTAMCYEHGGMIDDGTVFRLGRDNF 518
>gi|319783034|ref|YP_004142510.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317168922|gb|ADV12460.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 997
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILL--YFLISKIE 61
V +S I V G A FL + T TL AR +L G L ++
Sbjct: 662 VDVSTLGKIAVQGPDAAAFLDRVYTNMFSTLAVGKARYGLMLREDG--LAFDDGTTWRLG 719
Query: 62 EDTFILEIDRSKRDSLIDKLLFY 84
E F++ + ++ L ++
Sbjct: 720 EQDFLMTTTTANAGKVMQHLEYF 742
>gi|91778508|ref|YP_553716.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia
xenovorans LB400]
gi|91691168|gb|ABE34366.1| Sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia
xenovorans LB400]
Length = 1000
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 54/267 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G + L + T L R +L G I + ++ + ++
Sbjct: 666 STLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLADQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99
+ ++ L ++R V+ ++ Q I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVCQDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ +E T + ++ R S + L W + DI
Sbjct: 786 ANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ P+D M G+ ++G+ ++R
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSMTPYDLGM---GGLVAKSKDFLGKRSLTRSDTAK 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P GS I+
Sbjct: 902 AGRKQLVGLLSDDPSFVIPEGSQIVAG 928
>gi|85374842|ref|YP_458904.1| glycine cleavage system aminomethyltransferase T [Erythrobacter
litoralis HTCC2594]
gi|84787925|gb|ABC64107.1| glycine cleavage system T protein [Erythrobacter litoralis
HTCC2594]
Length = 379
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 47/274 (17%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLI---S 58
S +S+ + + G+ A L+A++ + +L R + +L G IL ++ S
Sbjct: 56 SLFDVSHMGQLVISGEGATEALEALVPGKLSSLKPGNIRYTLLLNEDGGILDDLMVTNMS 115
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF--- 115
+ + + F L ++ + + I L + L + + G+V + + +
Sbjct: 116 REDVEEFYLVVNGATKWDDIAHLREH-LPDEITMNHLDGRGLVALQGPKAAEALETVFPG 174
Query: 116 IDERFSIADVLLHRTWGH---------------------------NEKIASD-------I 141
+ ER G E + +D +
Sbjct: 175 VAERLVFMQGTGFEWRGDMIGVARCGYTGEDGFEINISASHIEQLAEALVADDRVRPAGL 234
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRN 198
LR+ G+ D T DL ++ ++ G ++G +++
Sbjct: 235 GARDSLRLEAGLPLYGHDLTVET---DPVSADLTFALTKSRRETGGWMGHGRIAQALMSG 291
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGV 232
KR + G+ + D EIG +
Sbjct: 292 PETKRVGLKIEGRMPAREGALVYIGDAEIGRVTS 325
>gi|110667811|ref|YP_657622.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109625558|emb|CAJ51984.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
Length = 474
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 72/225 (32%), Gaps = 46/225 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A +IT D + + + G IL ++ ++ ED F I
Sbjct: 116 IRVKGPDAEALTNYVITRDATEIDPMHGKYVILCNEDGGILNDPILLRVAEDEFWFSISD 175
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPING--------------VVLSWNQEHTFSNSSFID 117
S +L+ + + + +E+ I+ V + + ++
Sbjct: 176 S---TLMQWIEGVNVGMDFDVEVDEIDVAPMQIQGPRSEDVMVDVVGEEVSEIPYYGLME 232
Query: 118 ERFSIADVLLHRTWGHNEK---------IASDIKTY------------------HELRIN 150
A+VL+ +T EK + + + + H RI
Sbjct: 233 AEIGGAEVLISQTGFSGEKGFEIYVRDAMETAERVWDPVLDSVKDHGGMQIAPGHHRRIA 292
Query: 151 HGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
GI+ D T P + + YIG+E + R Q
Sbjct: 293 AGILSWGQDMDHETS-PFQVNLGY-QVPDNKQADYIGKEELERQQ 335
>gi|206564226|ref|YP_002234989.1| putative sarcosine oxidase subunit alpha [Burkholderia cenocepacia
J2315]
gi|198040266|emb|CAR56251.1| putative sarcosine oxidase alpha subunit [Burkholderia cenocepacia
J2315]
Length = 1003
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 56/275 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGTL 230
RK+ + + D+ + P G+ I+ D ++ +
Sbjct: 901 KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQVSAV 935
>gi|89055938|ref|YP_511389.1| sarcosine oxidase alpha subunit family protein [Jannaschia sp.
CCS1]
gi|88865487|gb|ABD56364.1| sarcosine oxidase alpha subunit family [Jannaschia sp. CCS1]
Length = 976
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 18/208 (8%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
V +S I++ G A FL + T TL AR +L G ++ + + ++
Sbjct: 641 VDVSTLGKIEIFGADAGAFLDFLYTNTFSTLKPGRARYGLMLREDGHVMDDGTTACLADN 700
Query: 64 TFILEIDRSKRDSLIDKLLF--YKLRSNVIIEIQPINGVV----LSWNQEHTFSNSSFID 117
+++ + ++ + F LR ++ + + ++ T N
Sbjct: 701 HYVMTTTTAAAGPVMAHMDFASQVLRPDLDVAFTSVTEQWAQFSVAGPHARTLINGVLDQ 760
Query: 118 E----RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH----- 168
F R G ++ I E + D L +
Sbjct: 761 PIDGDSFPFMQCGAVRVHGVPGRLFR-ISFSGEHAYEVAVPAAYGDALYRDLVARAEALG 819
Query: 169 --DALMDLLNGISLTKGCYIGQEVVSRI 194
M+ LN + + KG E+ R+
Sbjct: 820 GGAYGMEALNVLRIEKGFITHSEIHGRV 847
>gi|149203546|ref|ZP_01880516.1| aminomethyl transferase family protein [Roseovarius sp. TM1035]
gi|149143379|gb|EDM31418.1| aminomethyl transferase family protein [Roseovarius sp. TM1035]
Length = 814
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 60/316 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L + + + G A +L+ +T + + A +G+I+ F +++ED+F
Sbjct: 500 LPGFTRLWIEGAGADDWLRGFVTGGLPKVGRMNLVYVA--DKRGRIVTEFSCIRLQEDSF 557
Query: 66 ILEIDR------------------SKRDSLIDK----LLFYKLRSNVI-IEIQPINGVVL 102
+L S R++ ++ L K R + + ++ L
Sbjct: 558 VLITASTAQWHDGELVRRALPEGLSLRETTAERDALLLAGPKSREILTGLTDADLSLPWL 617
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK-------------TYHELRI 149
S +F+ R S L N I + + + LRI
Sbjct: 618 SHQHASVAGQKAFL-ARVSFTGELGWEIHAENAAIPAIYEALIGAGVKPFGMFALNSLRI 676
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR----IQHRNIIRKRP- 204
G D + ++ + K QE + + + ++KR
Sbjct: 677 EKGYRAWKGDLSTDYSM-LEGGLERF--VKFDK----PQEFTGKAALLAEKQAGVKKRFV 729
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMAL 257
+I+ P S + + +G V AL + R D + + +
Sbjct: 730 TLIVEAKAADAPYMSTLWHEGQIVGETTSGAWGYRVNASVALGMLRADLAVQGTRIEVEI 789
Query: 258 TVH--GVRVKASFPHW 271
V+A P W
Sbjct: 790 YGERCAAVVQADAPLW 805
>gi|149374589|ref|ZP_01892363.1| putative aminomethyltransferase protein [Marinobacter algicola
DG893]
gi|149361292|gb|EDM49742.1| putative aminomethyltransferase protein [Marinobacter algicola
DG893]
Length = 453
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A F+ +IT D + + + G IL ++ ++ ED F +
Sbjct: 112 IQVKGPDAERFVNYVITRDATKIKPMRGKYVILCNEDGGILNDPVLLRVAEDEFWFSLSD 171
Query: 72 SKRD 75
S +
Sbjct: 172 SDLE 175
>gi|78064802|ref|YP_367571.1| glycine cleavage system aminomethyltransferase T [Burkholderia sp.
383]
gi|123569607|sp|Q39KT9|GCST_BURS3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|77965547|gb|ABB06927.1| Glycine cleavage system T protein [Burkholderia sp. 383]
Length = 372
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|145223667|ref|YP_001134345.1| FAD dependent oxidoreductase [Mycobacterium gilvum PYR-GCK]
gi|315443993|ref|YP_004076872.1| glycine cleavage system protein T (aminomethyltransferase)
[Mycobacterium sp. Spyr1]
gi|145216153|gb|ABP45557.1| FAD dependent oxidoreductase [Mycobacterium gilvum PYR-GCK]
gi|315262296|gb|ADT99037.1| glycine cleavage system T protein (aminomethyltransferase)
[Mycobacterium sp. Spyr1]
Length = 816
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 77/269 (28%), Gaps = 62/269 (23%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G A FLQ + T +V + +L G I ++++ + F + +
Sbjct: 509 EVSGSGAAAFLQQMTTNNVDK-SVGSVTYTLLLDESGGIRSDLTVARLGPEHFQV---GA 564
Query: 73 KRDSLIDKLLFYKLRSN----VIIEIQPINGVVLSWNQ---------------------- 106
D L R V+ +I + W
Sbjct: 565 NSPMDFDWLS----RRKPPGVVVRDITGGTCCLGVWGPRAREVIAPLCPDNLSHKAFAYF 620
Query: 107 ---EHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----DIK------------TYHE 146
+ R S L + E A+ D ++
Sbjct: 621 RAMHTHLGAIPVVMMRVSYVGELGWEIYAGAEYGAALWDLIDEAGAAHGIIPAGRIAFNS 680
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE--VVSRIQHRNIIRKRP 204
LRI G TD + P A +D + + KG ++G++ + + + R
Sbjct: 681 LRIEKGYRSWGTDMT-AEHRPAAAGLDF--AVRVDKGDFVGRQALLTAGSPDATL---RS 734
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVV 233
++ D P+ D +G +
Sbjct: 735 IVFDDPDAAVLGKEPVSVGDTCVGYVTSA 763
>gi|324503980|gb|ADY41718.1| Dimethylglycine dehydrogenase [Ascaris suum]
Length = 836
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 49/289 (16%), Positives = 92/289 (31%), Gaps = 64/289 (22%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V L+ + I+V G +I L ++T V L S +LT +G IL F I +
Sbjct: 503 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 560
Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEI----------------QPINGVV 101
+ FIL D + + L V I I + G+
Sbjct: 561 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLAVVGPSSRDVLQGLT 620
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI-------------------- 141
S + F S R + + RT +++ ++
Sbjct: 621 KSDMSDKGFGQRSTRLLRLNNVPAVAARTSTLTGQLSFELFHDRADTLNLYNTLMREGES 680
Query: 142 --------KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSR 193
++ +R+ HG + T P + + L + L K +IG+
Sbjct: 681 YGITNCGQDAFNIMRLEHGFKLWGRELTLDT-NPFECGLHHL--VDLNKKDFIGKTSAVE 737
Query: 194 IQHRNIIRKRPMIITGTD-------DLPPSGSPIL---TDDIEIGTLGV 232
+ + RK ++ + P G+ ++ + IG +
Sbjct: 738 LSQKKWNRK-LALLACDTLQEGQDWESIPKGNEVIRRQGAEERIGQITS 785
>gi|255264108|ref|ZP_05343450.1| glycine cleavage system T protein [Thalassiobium sp. R2A62]
gi|255106443|gb|EET49117.1| glycine cleavage system T protein [Thalassiobium sp. R2A62]
Length = 367
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 59/312 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G L+ I+ +V+ L R G IL +I+ D
Sbjct: 53 SHMGQVILRGADPAATLETIVPVNVVGLAEGRQRYGLFTNDAGGILDDLMIANRG-DHLF 111
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI--- 122
L ++ + +D+ + + +N+ ++++ I+ +L+ + + + I + +
Sbjct: 112 LVVNAACKDADVAHMQ-----ANLTGVDLEVIDRSLLALQGPASEAAFATIAPQVAAMKF 166
Query: 123 ----------ADVLLHR------------------------TWGHNEKIASDIKTYHELR 148
D+ + R ++ + LR
Sbjct: 167 MDVGIYPSDYGDLWVSRSGYSGEDGYEISVDNAHATDFACALLALDDVAPIGLGARDSLR 226
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDL-------LNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ G+ +D T P +A ++ G G + G +V+ R
Sbjct: 227 LEAGLCLYGSDLDT-TTTPVEADLNWAIQKIRRTGG--DRAGGFPGADVILPQLENGAAR 283
Query: 202 KRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMA 256
KR ++ +G + D +IGT+ ++ +A+A +D A +
Sbjct: 284 KRIGLLPEGRAPMRAGVTLHDADGTQIGTVTSGAFGPTIERPMAMAYVDTAHAATGTEIF 343
Query: 257 LTVHGVRVKASF 268
V G + A
Sbjct: 344 GNVRGKMLPAVV 355
>gi|326773677|ref|ZP_08232960.1| glycine cleavage system T protein [Actinomyces viscosus C505]
gi|326636907|gb|EGE37810.1| glycine cleavage system T protein [Actinomyces viscosus C505]
Length = 421
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ +KV G A L A++ A + + AR + I++P G ++ ++ + ++
Sbjct: 59 LSHMGEVKVAGPEAGAALDHALVGA-LSAVAVGRARYTMIVSPSGGVIDDLIVYHVGDEE 117
Query: 65 FILEIDRSKRDSLIDKL 81
+++ + R+ + +L
Sbjct: 118 YLVVPNAGNRERVAAEL 134
>gi|84502875|ref|ZP_01000988.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597]
gi|84388858|gb|EAQ01728.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597]
Length = 370
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 50/309 (16%)
Query: 7 SNQSFIKVCGKS-AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + + G++ A F +A++ DV+ L R + G IL + S + F
Sbjct: 53 SHMGQVLLRGENPARAF-EALMPVDVVGLKEGRQRYGLLTDDTGGILDDLMFSNRGDHLF 111
Query: 66 ILEIDRSKRDSLI-----------------DKLLFYKLRSNVIIEIQ----------PIN 98
+ K D + L R+ ++ +
Sbjct: 112 TVVNAACKADDIAHMRAAMPGVEVEEVTDRALLALQGPRAQAVLAALAPEVADMRFMDVR 171
Query: 99 GVVLSWNQEHTFSNSSFIDERFSI------ADVLLHRTWGHNEKIASDIKTYHELRINHG 152
V L + + ++ + I A+ L H + + + LR+ G
Sbjct: 172 TVALCGAECWVSRSGYTGEDGYEISVPADSAETLARALLDHPDTLPIGLGARDSLRLEAG 231
Query: 153 IVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
+ D T P +A + G + G + + + RKR +
Sbjct: 232 LCLYGHDIDT-TTTPVEAGLQWAIQKVRRAGGDRAGGFPGADRILKQLAEGAERKRVGLR 290
Query: 208 TGTDDLPPSGSPILTDD---IEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALT 258
G P+ + +GT+ V A+ ID L
Sbjct: 291 PQGRAPMREGVPLFAGEAATDPVGTITSGAFGPTVQAPVAMGYLPIDLAAQGTIISAELR 350
Query: 259 VHGVRVKAS 267
V+ +
Sbjct: 351 GRRAPVEVA 359
>gi|153803453|ref|ZP_01958039.1| glycine cleavage system T protein [Vibrio cholerae MZO-3]
gi|124121003|gb|EAY39746.1| glycine cleavage system T protein [Vibrio cholerae MZO-3]
Length = 189
Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSN 89
D++ LP R + QG I+ +++ + D + ++ + + I L + L ++
Sbjct: 80 DIIDLPVGKQRYAFFTNAQGGIMDDLMVANMG-DHLFVVVNAACKAQDIAHLKAH-LPAD 137
Query: 90 VIIEIQPINGVVLSWNQEHT 109
V +E+ ++ +
Sbjct: 138 VEMEVIEDRALLALQGPKAA 157
>gi|260459679|ref|ZP_05807933.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259034481|gb|EEW35738.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 860
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 82/292 (28%), Gaps = 54/292 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL-EIDR 71
+V G A FL ++T + + ++ GK++ F I+K ED F++
Sbjct: 495 EVSGPGAEEFLNRLMTNRMPK--TGRIVLTPMINEFGKLIGDFTIAKAGEDRFMIWGSSA 552
Query: 72 SKRDSLI---DKLLFYKLR-SNVIIEIQPINGVVLSWNQEH------------------- 108
+++ + L R S V I V LS
Sbjct: 553 AQKYHMRWFEKHLPKDGPRGSEVRIHRFDQTLVGLSIAGPKSRDLLQKLVDVDISTKAFR 612
Query: 109 -------TFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKTY 144
+ + R + L + W + ++
Sbjct: 613 FMDFREMAVGGAPCMVNRITYTGDLGYEIWMAPAYERLVYKAIKDAGEEFGLVDFGMRAL 672
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+R+ + P P + MD I L K +IG+E ++ Q +R
Sbjct: 673 LSMRLEKNFPTWFRELRP-IYGPFEGSMDRF--IKLEKNDFIGREAAAKEQAEGPKLRRV 729
Query: 205 MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
I D G + + G V R D ++ A
Sbjct: 730 SFIVDAADADVMGDEPIWAKVSK-DFGTVEKPHGYGAPRFDDKGKEVRGSKA 780
>gi|255264165|ref|ZP_05343507.1| glycine cleavage T-protein [Thalassiobium sp. R2A62]
gi|255106500|gb|EET49174.1| glycine cleavage T-protein [Thalassiobium sp. R2A62]
Length = 794
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 95/294 (32%), Gaps = 58/294 (19%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q I T ++ TLP +A+ G ++ + ++ +D F
Sbjct: 463 LSPLRKFEINGPDAEALCQYIFTRNMKTLPIGGVVYTAMCYEHGGMIDDGTVFRLAKDNF 522
Query: 66 ---------------------ILEIDRSKRDSLIDKL-----LFYKLRSNVI------IE 93
+ + RS D L + LR + E
Sbjct: 523 RWIGGNDYGGEWIREQAEKLGLKVLARSSTDQLHNVAVQGPESRDILR-KITWTAPHNPE 581
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT---WGHNEKIASDIK-------- 142
+ + + + + F+ R L + H +I I
Sbjct: 582 FDQLGWFRFTPARLNNEGGTPFVLSRTGYTGELGYEVMCHPKHAPEIFDAIWEAGQGHGL 641
Query: 143 ------TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+R+ G++ DF T P +A + + +IG++ + R
Sbjct: 642 TPMGLEALDMVRVEAGLIFAGYDFSDQTD-PFEAGIGFTVPLKSKPDDFIGRDALIR--R 698
Query: 197 RNIIRKRPMIITGTDDL-PPSGSPILTDDIEIGTLGVVVG----KKALAIARID 245
+ +++ + + ++ G I +IG + + + +A+ARID
Sbjct: 699 KEHPQRKLVGLDIDSNVDVEHGDCIHIGRAQIGEVTSAMRSPLLGRNIAMARID 752
>gi|325961675|ref|YP_004239581.1| glycine cleavage system protein T (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
gi|323467762|gb|ADX71447.1| glycine cleavage system T protein (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
Length = 835
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 54/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65
+ V G A L + T ++ +L G I ++++ E+ F
Sbjct: 517 LSVVGPGAQALLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEDFQLGVNS 575
Query: 66 -----ILEIDRSKRDS--------------------LIDKLLFYKLRSNVIIEIQPINGV 100
L ++ K+ + L L + V + +G+
Sbjct: 576 NVDFDYLRVEARKQSAADPSQWVHVSDITGSTCCIGLWGPLAREVI-GKVSSDDLTNDGL 634
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143
+E + R S L + E IA+
Sbjct: 635 KYFRTKEISVGGIPVTAMRLSYVGELGWELYTTAEYGLKLWDLLFEAGREHGIIAAGRGA 694
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202
++ +R+ G TD P+++ + ++ K ++G E ++ + + R
Sbjct: 695 FNSMRLEKGYRLWGTDMTSEH-HPYESGLGFS--VAKDKAGFVGAEALAERKEQPATRAL 751
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + + P+ +G +
Sbjct: 752 RCLTVDDGTSIVLGKEPVYVAGEAVGYVTSAA 783
>gi|237797931|ref|ZP_04586392.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331020782|gb|EGI00839.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 360
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 92/305 (30%), Gaps = 44/305 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G+ A +L+ ++ DV L A S +L G I+ ++ E +
Sbjct: 50 SHMNVIDVLGRDARSWLRYLLANDVDRLKTPGRALYSVMLDDAGGIIDDMIVYLTAE-GY 108
Query: 66 ILEIDRSKRDSLIDKLL---------------FYKL-----RSNVIIEIQPINGVVLSWN 105
L ++ + + + L RS I + N
Sbjct: 109 RLVVNAANGAKDLAWMKSQLGDAEVQLNERSEMAILAIQGPRSRARIADLVTSSRARLIN 168
Query: 106 QEHTFSNSSFID---ERFSIADVLLHRTWGHNEKIASDIKTY-------------HELRI 149
+ F D R E+ S LR+
Sbjct: 169 ELKPFEGRDDADWFIARTGYTGEDGLEIMLPAEQAPSFFNDLVGAGISPIGLGARDTLRL 228
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D P + + ++ +IG++ + R + I K ++
Sbjct: 229 EAGMNLYGQDIGEGVS-PLVSNIAWSIAWEPSERDFIGRKALERERVDGIASKLVGLVLE 287
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + + +I G + K++A+AR+ + A + + + V+
Sbjct: 288 ERGVLRAHQVVRIAEIGEGEITSGSFSPTLSKSIALARV-PMATADRAEVEIRGKWYPVR 346
Query: 266 ASFPH 270
P
Sbjct: 347 VVQPA 351
>gi|119504061|ref|ZP_01626142.1| putative oxidoreductase protein [marine gamma proteobacterium
HTCC2080]
gi|119460064|gb|EAW41158.1| putative oxidoreductase protein [marine gamma proteobacterium
HTCC2080]
Length = 814
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 58/290 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G+ A L I +V + + L G I I+++ E+ F
Sbjct: 486 LSSFAKFRCEGRDAAGVLNRICANNVD-VSVGRVIYTQWLNELGGIEADLTITRLSENAF 544
Query: 66 ILEIDRSKRDSLIDKLL-----------------FYKL-----RSNVII-EIQPIN---- 98
++ L L ++ ++ + P +
Sbjct: 545 LVVTAAETEVRDFYWLKQHIPETAHCVLTNVTSGMGVLSIMGPQARALLQSLSPDDLSHK 604
Query: 99 GVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDI 141
G + ++E R + L + E + +
Sbjct: 605 GFPFATSREIELGLGYVRASRITFVGELGWELYIPTEFMQDIYDRIVSTGQAFGLVHAGY 664
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK--GCYIGQEVVSRIQHRNI 199
+ LR+ + D P +A + + I K G +IG+E + R Q + +
Sbjct: 665 HALNSLRLEKAYRHWSHDITDEDS-PLEAGLGFV--IKFDKPQG-FIGREALLRQQEQGL 720
Query: 200 IRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVV------GKKALAIA 242
R+ + + + L PI D +G + G L
Sbjct: 721 SRQLLQLKLCDPEPLIYHNEPIWRDGALVGHITSGAYGHTLGGAIGLGYV 770
>gi|86137901|ref|ZP_01056477.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
MED193]
gi|85825493|gb|EAQ45692.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
MED193]
Length = 981
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A L + T TL R +L G ++ +++ E
Sbjct: 646 CDVSTLGKIDIQGPDAAKLLDFVYTNTFSTLKQGRVRYGLMLREDGFVMDDGTCARLGES 705
Query: 64 TFILEIDRSKRDSLIDKLLF 83
++L + ++ L F
Sbjct: 706 HYVLTTTTAAAGEVMAHLEF 725
>gi|119961253|ref|YP_946778.1| glycine cleavage system aminomethyltransferase T [Arthrobacter
aurescens TC1]
gi|119948112|gb|ABM07023.1| glycine cleavage system T protein [Arthrobacter aurescens TC1]
Length = 377
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 44/331 (13%), Positives = 103/331 (31%), Gaps = 69/331 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + V G A FL + + + A+ S I G I+ + + + F
Sbjct: 50 LSHMGEVWVTGPEAAAFLDYALVGKISAMADGKAKYSLICQEDGGIIDDLITYRRGSEKF 109
Query: 66 ILEIDRS----KRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------N 112
++ + +L+++ + +V ++ +++ +
Sbjct: 110 LVVPNAGNAKVVATALLERAAGF----DVEVQDASAETSLIAVQGPLAEAILLRLVPVEQ 165
Query: 113 SSFIDE-------------RFSIADVLLHRTWGHNEK-----IASDIKT--YHE------ 146
+ + E D+LL RT E +A+D +
Sbjct: 166 HALVTELKYYAAVEVPFTFDGGTQDLLLARTGYTGEDGFEIFVANDSAAALWQAIAGAAE 225
Query: 147 --------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVS 192
LR+ G+ + P A + + +S +G ++G++ ++
Sbjct: 226 EGELTPAGLASRDSLRLEAGMPLYGNELSREG-NPFAAGLGPVVALS-KEGDFVGKDALA 283
Query: 193 RIQHRNIIR---KRPMIITGTDDLPPSG-SPILTDDIEIGTLGVVVGK------KALAIA 242
++ ++ + + G G P+L D +G + ALA
Sbjct: 284 ALKADGAGSTSGRKLVGLKGLGRRAGRGHYPVLKDGAVVGEVTSGQPSPTLGYPVALAYV 343
Query: 243 RIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
++ + + L + +YK
Sbjct: 344 DVEHSELGTALDIDLRGKSEPFEVVALPFYK 374
>gi|254452855|ref|ZP_05066292.1| aminomethyl transferase family protein [Octadecabacter antarcticus
238]
gi|198267261|gb|EDY91531.1| aminomethyl transferase family protein [Octadecabacter antarcticus
238]
Length = 382
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ V GK A + T +V + A +A+L +GK + +I + +T+++ I
Sbjct: 62 LHVTGKDAAYVIDRCTTRNVEKIAPGRAVYAAMLNGEGKFIDDCVIYHLAVNTWMVVI 119
>gi|110679087|ref|YP_682094.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh
114]
gi|109455203|gb|ABG31408.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh
114]
Length = 975
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T TL R +L G ++ +++ E
Sbjct: 640 CDVSTLGKIDIQGPDAGRFLDFVYTNMFSTLNVGRVRYGLMLREDGHVMDDGTTARLAET 699
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 700 HFLMTTTTAAAGPVMRHLEF 719
>gi|87307268|ref|ZP_01089413.1| probable aminotransferase-glycine cleavage system T protein
[Blastopirellula marina DSM 3645]
gi|87290008|gb|EAQ81897.1| probable aminotransferase-glycine cleavage system T protein
[Blastopirellula marina DSM 3645]
Length = 367
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 94/312 (30%), Gaps = 52/312 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED--- 63
S+ + + G A FL ++T +P R S + +G IL LI + E
Sbjct: 51 SHMARFRFDGAGAGDFLDKLLTRKASVVPMGKIRYSLVCNDEGGILDDVLIYNLGEGDNQ 110
Query: 64 TFILEIDRSKRDSLIDKLLFY-----KLRS--------------NVIIEIQPINGVVLSW 104
F L ++ R + + + + + I +QP+ V +S
Sbjct: 111 YFWLVVNAGNRQKIAAWIEQHLPSEGVVFTDHTLETAMIAVQGPKAIAAVQPLCDVPISD 170
Query: 105 -----NQEHTFSNSSFIDER--------------FSIADVLLHRTWGHNEK---IASDIK 142
T + R + A + + + + +
Sbjct: 171 LKYYSGALGTLCGEPALISRTGYTGEDGVEVTVPAAAAIAIWDQILNAAQPLGGLPCGLG 230
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK 202
LR+ + + +I P A + G+S +IG++ + +
Sbjct: 231 ARDTLRLEAAMPLYGHEL-SESIDPITAGLTF--GVSFDHD-FIGKDRLEAARDAAPPMV 286
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALT 258
R +P + D ++G + + +A+ +D + +
Sbjct: 287 RVGFRCADRRVPREHCTVHIGDQQVGEVTSGTFSPTLNQPIAMGYVDPAIAVSGTAVEID 346
Query: 259 VHGVRVKASFPH 270
+ G RV A
Sbjct: 347 IRGKRVAAEVAP 358
>gi|75758497|ref|ZP_00738618.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74494024|gb|EAO57119.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 347
Score = 40.6 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 43/267 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ LS I V G+ + FL ++T D++ + + + +L G ++ + K E+
Sbjct: 25 IDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEEETTLFTLLLKEDGTVIDIINLFKNEDS 84
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVV-----LSWNQEHTF-------- 110
++ K+D+++ L K II+I + ++ +W F
Sbjct: 85 ITVITTPH-KKDTVLAWLENQKTNGIEIIDISQTHSLLGFEGPYAWRLAQQFLDFEISSL 143
Query: 111 SNSSFIDERFSIADVLLHRTWGHNE---------------------KIASDIK----TYH 145
SF+ + ++LL RT E DI +
Sbjct: 144 PFQSFVLNQLFGKEILLARTGVTAEYGYQLLFEKYLEPIVFETINSFKDDDINLKKVDWE 203
Query: 146 ELR-INHGIVDPNTDFLP-STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
L + I P +F + +A ++ I K + G++ + + + ++
Sbjct: 204 TLETLMLEIRHPYFEFKHLEELNIFEASLEWF--IDFYKDEFYGRDSLEQQSEAGVNKRI 261
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTL 230
TG + I ++ IG +
Sbjct: 262 VGFTTGIESQITVNDEIFIEEQLIGKV 288
>gi|300024300|ref|YP_003756911.1| glycine cleavage system protein T [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526121|gb|ADJ24590.1| glycine cleavage system T protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 382
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 91/293 (31%), Gaps = 51/293 (17%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE----DTFILEIDRSKRDSLI 78
L+A++ AD++ L R S +L G ++ ++++ EE IL ++ S++D I
Sbjct: 81 LEALVPADIVELVPGQQRYSQLLNASGGVIDDLMVTRPEESDESGRLILVLNASRKDIDI 140
Query: 79 DKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF-IDER------------------ 119
+ + +L IE P ++ + D R
Sbjct: 141 EHIAR-QLCEGTRIESCPDLALLALQGPKSGDVLEPICPDSRKLAFMQATRTQIAGCDCF 199
Query: 120 -----------------FSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLP 162
S A L ++E + LR+ G+ +
Sbjct: 200 VSRSGYTGEDGFEISVGASDAVTLWRALLANDEVRPCGLGARDSLRLEAGLCLYGHEL-D 258
Query: 163 STIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILT 222
TI P +A + G + G E + + R R + G+ IL+
Sbjct: 259 ETISPVEAGLTWSIPKRRRTGGFPGAERILGEISASPARTRVGLHFIGRAPAREGAKILS 318
Query: 223 D-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
EIG + ALA + + + V G + A
Sbjct: 319 KMGDEIGVVTSGGYSPTLKQPIALAYVPPEYASA--DTPLTVIVRGEPLDAKV 369
>gi|225718822|gb|ACO15257.1| Aminomethyltransferase, mitochondrial precursor [Caligus clemensi]
Length = 268
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V GK + F+ ++ T D L + +G I+ ++ E L +
Sbjct: 79 RVMGKDRMKFIGSLTTLDGEALGDNSGSLTIFTNERGGIIDDLIVMNTGEGYLFLVTNAG 138
Query: 73 KRD---SLID----KLLFYKLRSNVIIEIQPINGVVLSWNQE 107
+D L+ L L +V +E+ +G++ +
Sbjct: 139 CKDKDIPLMKTKAETLKKNGL--DVELELIDDHGLIAIQGPQ 178
>gi|170061082|ref|XP_001866082.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus]
gi|167879333|gb|EDS42716.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus]
Length = 413
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK I +++ TADV L + +G IL +++++ +DT + + S+
Sbjct: 91 LRGKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVSDDTLYVVSNASR 150
Query: 74 RDS 76
+++
Sbjct: 151 KET 153
>gi|92117170|ref|YP_576899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter
hamburgensis X14]
gi|91800064|gb|ABE62439.1| glycine cleavage system T protein [Nitrobacter hamburgensis X14]
Length = 387
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 75/262 (28%), Gaps = 49/262 (18%)
Query: 18 SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSL 77
A L+ ++ D++ + R + G +L +++ D L ++ + + +
Sbjct: 76 DAALALERLVPQDIVAVAPGRQRYALFTNAAGGLLDDLMVANFG-DHLFLVVNGACKAAD 134
Query: 78 IDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----------- 118
L + L ++ +Q + F+D
Sbjct: 135 EAHLREHLSDVCTIEVLADRALVALQGPKAASVLAKACPEAPAMRFMDAGPHQVRIAGGA 194
Query: 119 --------------------RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNT 158
+ A+ L+ + + + LR+ G+
Sbjct: 195 IACFVSRSGYTGEDGFEISIPAAQAEALVSGLLDDPDVMPVGLGARDSLRLEAGLCLYGH 254
Query: 159 DFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDL 213
D +T P +A ++ G + G V+ + R+R +
Sbjct: 255 DI-DATTTPVEAALEWSVQKSRRSGGARAGGFPGANVILPQFEQGASRRRVGLRPEGRAP 313
Query: 214 PPSGSPILTD---DIEIGTLGV 232
G+P+ D IGT+
Sbjct: 314 VREGAPLFADASSSDPIGTVTS 335
>gi|218460207|ref|ZP_03500298.1| sarcosine oxidase, alpha subunit family protein [Rhizobium etli Kim
5]
Length = 468
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 18/199 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL I L AR +L G I S+ +
Sbjct: 195 LCDVSTLGKIEIFGRDAATFLDRIYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 254
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
+ F + + ++ L F +++ P + +L+ +
Sbjct: 255 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 314
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
S+++F + R G +I+ + +EL + G + D + ++
Sbjct: 315 EDISDAAFPFMSARKVSLFGGRLEGRLFRISFSGERAYELAVPAGYGESVADAIMASGEK 374
Query: 168 H---DALMDLLNGISLTKG 183
H + L + + KG
Sbjct: 375 HGICAYGAEALGVLRIEKG 393
>gi|167587896|ref|ZP_02380284.1| glycine cleavage system aminomethyltransferase T [Burkholderia
ubonensis Bu]
Length = 372
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + + +V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAVANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|84515376|ref|ZP_01002738.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis
SKA53]
gi|84510659|gb|EAQ07114.1| sarcosine oxidase, alpha subunit family [Loktanella vestfoldensis
SKA53]
Length = 965
Score = 40.6 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A P L + T + TL R +L G ++ +++ D
Sbjct: 630 CDVSTLGKIDVQGPDAAPLLDFVYTNRMSTLKVGRVRYGLMLREDGFVMDDGTAARLGPD 689
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 690 HFVITTTTAAAGQVMRHLEF 709
>gi|163851079|ref|YP_001639122.1| sarcosine oxidase alpha subunit family protein [Methylobacterium
extorquens PA1]
gi|163662684|gb|ABY30051.1| sarcosine oxidase, alpha subunit family [Methylobacterium
extorquens PA1]
Length = 1009
Score = 40.6 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 49/241 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++
Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
+ ++ L F + +++Q + V W Q A L R
Sbjct: 739 ANAPRVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAG---------PRARDTLRR-- 786
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL--NGISLTKGCYIGQE 189
IVDP D + FP A D+ GI
Sbjct: 787 ---------------------IVDPGFDL-SNEAFPFLACADVTVGGGIPAR-------- 816
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDH 249
+ RI + + D ++ + G G +AL++ RI+K
Sbjct: 817 -LFRISFSGEVAYELAVPAAYGDAAWRA--VMQAGLPYG--ITAYGSEALSVMRIEKGHA 871
Query: 250 A 250
A
Sbjct: 872 A 872
>gi|163744119|ref|ZP_02151484.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
gi|161382617|gb|EDQ07021.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
2.10]
Length = 815
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 96/314 (30%), Gaps = 56/314 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S + G+ A FL+ ++T + + + +G+IL + ED F
Sbjct: 501 LPGFSRFNLSGEGAAEFLRGLVTGGLPKVGRMNLVYVS--DDRGRILTEMSCIRHGEDHF 558
Query: 66 ILEIDRSKR---DSLIDKLLFYKLRSN----------VI----------IEIQPINGVVL 102
+ S + ++ K L LR V I ++ L
Sbjct: 559 TMITAGSAQWHDFEILKKALPAGLRLTDHTTEFATMIVTGPQSRDLFAGISDADLSLGWL 618
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRI 149
+ + +F+ R S A L NE + LRI
Sbjct: 619 THQEATVAGKPAFL-ARVSYAGELGWEVHCANEHQPAIYDALLAGGAKPFGMYALNSLRI 677
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MII 207
G D + ++ + L K + G+ + + + + + +I+
Sbjct: 678 EKGYRTWKGDLSTDYSL-LEGGLERF--VKLDKPQDFPGKAAIQSEKQQGVKKSIVTLIV 734
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261
D P S I D +G V AL + R D + + + ++G
Sbjct: 735 EAGDADAPYMSCIWKDGEIVGETTSGDWGYRVNASIALGMVRSDAAVPGTE--LEVEIYG 792
Query: 262 VRVKAS----FPHW 271
+ +A P W
Sbjct: 793 EKCRAVVQEDKPLW 806
>gi|83952529|ref|ZP_00961260.1| dimethylglycine dehydrogenase [Roseovarius nubinhibens ISM]
gi|83836202|gb|EAP75500.1| dimethylglycine dehydrogenase [Roseovarius nubinhibens ISM]
Length = 792
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 10/174 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
LS S ++ G PFL+ + LTP G +L F ++++ ED
Sbjct: 484 ADLSVFSKFEITGADLAPFLETLGAN--RAPDLGRIGLCHGLTPAGGVLSEFTVTRLAED 541
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSN---VIIE-IQPINGVVLSWNQEHTFSNSSFID-E 118
L + + +D L +LR+ V I + V+ + + D
Sbjct: 542 HAYLTSAAAAEEIDLDLL---RLRAKGMDVEIRNVTDDLAVIAVMGPKAPETCPELADMP 598
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALM 172
S + L +++ + EL + G + L PH
Sbjct: 599 WLSARETTLDGIAIRALRLSYIGECGWELHVARGAATTLFEALERRATPHGLGF 652
>gi|126740661|ref|ZP_01756347.1| probable glycine cleavage system T protein [Roseobacter sp.
SK209-2-6]
gi|126718176|gb|EBA14892.1| probable glycine cleavage system T protein [Roseobacter sp.
SK209-2-6]
Length = 815
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 51/272 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ + + G A L I DV P + +L +G I + ++ D F
Sbjct: 489 TSFAKFSLKGPDAQAVLNWICANDVAK-PIGSLIYTQMLNDKGGIECDLTVGRVAHDEFY 547
Query: 67 LEIDRSKRDSLIDKLLF--------------------------------YKLRSNVI--- 91
+ D + R +V
Sbjct: 548 IVTGTGYATHDFDWIRRNIPAGLNCQLFDITSSNAVLSLMGPKAREILSVVTRDDVSNEG 607
Query: 92 ----------IEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDI 141
I P+ + +++ E + ++ ++ D L+H + +
Sbjct: 608 FEFGTIRTIGIAGCPVQALRVTYVGELGWELHLPVEYAQTVYDALMH-AGRPLGLVNAGY 666
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+ LR+ G + P P +A + + L + + + N ++
Sbjct: 667 RAIESLRLEKGYRAWGAEIGPDHS-PFEAGLGW--AVKLKQATPFKGRAAAELHKTNGVK 723
Query: 202 KRPMIITGTDDLPPSG-SPILTDDIEIGTLGV 232
K T ++ G I + +G L
Sbjct: 724 KMMAGFTVEPEVVLLGRETIYRNGKRVGWLTS 755
>gi|330898045|gb|EGH29464.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 485
Score = 40.2 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 157 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGLVIDDGVCARFAEQ 216
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------NSS 114
F + S D + ++L + + + ++I + + + N +S +
Sbjct: 217 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPYSRKVLEQVCTDLD 276
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
F V L G ++ + H LR+ +V+ F
Sbjct: 277 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGEPGYEIHVPARHALRLWDALVEAGKAFDMR 336
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ R +
Sbjct: 337 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEARPLK 396
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 397 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 456
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 457 PIRVE-DGVVVQATV 470
>gi|134292174|ref|YP_001115910.1| sarcosine oxidase alpha subunit family protein [Burkholderia
vietnamiensis G4]
gi|134135331|gb|ABO56445.1| sarcosine oxidase, alpha subunit family [Burkholderia vietnamiensis
G4]
Length = 1003
Score = 40.2 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
F N +F + R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRADTS 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + DD + P G+ I+ D ++
Sbjct: 901 KEGRKQFVGLLTADDQLVLPEGAQIIAKDTQV 932
>gi|332704196|ref|ZP_08424284.1| glycine cleavage system T protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554345|gb|EGJ51389.1| glycine cleavage system T protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 361
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE----I 69
+ G+ A L ++T ++ TL R +L G +L +I + +D ++L
Sbjct: 59 LRGQGAAKALSQVVTHNLDTLQPGKCRYGFMLNEHGGVLDDLIIYCLAQDEYMLVVNGAC 118
Query: 70 DRSKRDSLIDKL 81
+RS + + L
Sbjct: 119 ERSDFEWIKSHL 130
>gi|299067070|emb|CBJ38266.1| sarcosine oxidase (Alpha subunit) oxidoreductase protein [Ralstonia
solanacearum CMR15]
Length = 1003
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWGKLDVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSFIDERFSIADVLLHR------------TWGHNEKIASDIKTYHE----------- 146
F N +F + V R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGARARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D +I P+D M L ++ TK C +G+ ++R
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPYDLGMGGL--VAKTKDC-LGKRSLARSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + D + P G+ I+ D ++
Sbjct: 901 KAGRKQFVGLLTDDAQCVLPEGAQIIAPDTQV 932
>gi|289706043|ref|ZP_06502416.1| aminomethyltransferase [Micrococcus luteus SK58]
gi|289557245|gb|EFD50563.1| aminomethyltransferase [Micrococcus luteus SK58]
Length = 388
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I+V G A L A+ + + TL A+ + LT G IL ++ ++++
Sbjct: 52 LSHMGEIRVTGPEAGAMLDHALSSV-LSTLKPGRAKYALCLTDAGTILDDTIVYRMDDGE 110
Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+++ + ++ L + VV E S ++ +
Sbjct: 111 AGSEPDYLVVPNAGNIAAVHTALNQ---------RASGWDAVV-----EDESSTTALVAV 156
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY 144
+ A+ +L R +++K Y
Sbjct: 157 QGPQAERILARAMPEAAAQLAELKYY 182
>gi|237839583|ref|XP_002369089.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii
ME49]
gi|211966753|gb|EEB01949.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii
ME49]
Length = 866
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ +
Sbjct: 498 SLFDLAYRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 556
Query: 62 EDTFILEIDRSKRDSLIDKL 81
D ++ + + ++ +L
Sbjct: 557 RDFLLIIGNACNKSKILSRL 576
>gi|126733206|ref|ZP_01748953.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
CCS2]
gi|126716072|gb|EBA12936.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
CCS2]
Length = 968
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A L + T T+ R +L G ++ +++ E
Sbjct: 633 CDVSTLGKIDIQGPDAAALLDFVYTNMFSTVKVGRVRYGLMLREDGHVMDDGTTARLGEQ 692
Query: 64 TFILEIDRSKRDSLIDKLLF--YKLR----SNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
F++ + ++ L F LR + V I I + ++ +D
Sbjct: 693 HFVMTTTTAAAGLVMRHLEFVLQVLRPDLDAKV-ISITEQWAQFAVAGPQARALLNTVLD 751
Query: 118 ERF 120
+
Sbjct: 752 QEL 754
>gi|126727814|ref|ZP_01743644.1| probable aminomethyltransferase protein [Rhodobacterales bacterium
HTCC2150]
gi|126702941|gb|EBA02044.1| probable aminomethyltransferase protein [Rhodobacterales bacterium
HTCC2150]
Length = 794
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS ++ G A Q I T ++ TLP + + G ++ + ++ +D F
Sbjct: 463 LSPLRKFEITGPDAEALCQYIFTRNMKTLPIGGVVYTTMCYEHGGMIDDGTVFRLAKDNF 522
>gi|330819791|ref|YP_004348653.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia
gladioli BSR3]
gi|327371786|gb|AEA63141.1| Sarcosine oxidase, alpha subunit family protein [Burkholderia
gladioli BSR3]
Length = 1003
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 87/281 (30%), Gaps = 57/281 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G ++ L + T L AR +L G + + ++ E ++
Sbjct: 666 STLGKIDIQGPDSVKLLNWMYTNPWGKLEVGRARYGLMLDENGMVFDDGVTVRLGEQHYM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEI-QPING 99
+ ++ + K+R V+ ++ Q I+
Sbjct: 726 MTTTTGGAARVLTWMERWLQTEWPDMKVRLSSVTDHWATFAVVGPNSRKVVQKVCQDIDF 785
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ ++ T + + R S + L W + DI
Sbjct: 786 ANAAFPFMSYRDGTVAGARARVMRISFSGELAYEVNVPANAGRAVWEAIMAAGAEFDITP 845
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D +I PHD M L S ++G+ +SR
Sbjct: 846 YGTETMHVLRAEKGYIIVGQD-TDGSITPHDLGMSGLVAKSKD---FLGRRSLSRSDTTK 901
Query: 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKAL 239
RK+ + + D + +L + +I + L
Sbjct: 902 SNRKQFVGLLTDDP-----ATVLEEGGQIVEPNAAANAEGL 937
>gi|160872687|ref|ZP_02062819.1| glycine cleavage system T protein [Rickettsiella grylli]
gi|159121486|gb|EDP46824.1| glycine cleavage system T protein [Rickettsiella grylli]
Length = 362
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 101/308 (32%), Gaps = 43/308 (13%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ + + G++A+P+L + + L A + +L G +L ++ ++ E +
Sbjct: 50 SHMLAVDIIGQAALPYLSFLFANNPQRLIPGKALYTCMLNDAGGVLDDLIVYQLSEHIYR 109
Query: 67 LEIDRSKRDSLIDKLLFYKL---------RSN-VIIEIQPINGV--------------VL 102
+ I+ + R S +D + R++ II IQ + + +
Sbjct: 110 IVINAANRHSDLDWMKKQAQNFPTISIVERTDLAIIAIQGPHAITKTLQAFNAHQQSLIS 169
Query: 103 SWNQEHTFSNSSFIDERFSIADVLL-------------HRTWGHNEKIASDIKTYHELRI 149
+ H ++ + R + + LR+
Sbjct: 170 ALKPFHCLHDNHWFIARTGYTGEDGLEVILPLHEAENFWQRLIELGSKPCGLGARDTLRL 229
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ +D T P ++ + +IG++ +++ + + +++
Sbjct: 230 EAGLNLQGSDM-DITTTPLESNLAWTVAWDPIDRSFIGRQALNQQKENLTRKLVGLVLEE 288
Query: 210 TDDLPPSGSPILTDDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVK 265
+ + I+T E G + ++A+ RI H + + +
Sbjct: 289 KGRILRNHQKIITPKGE-GEITSGSYSPTLGTSIALGRIPYAHHEDYCDVIMGTKQYTAR 347
Query: 266 ASFPHWYK 273
P + +
Sbjct: 348 IVKPPFIR 355
>gi|330981689|gb|EGH79792.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 448
Score = 40.2 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 102/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 120 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 179
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 180 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 239
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
F V L G ++ + H LR+ +V+ F
Sbjct: 240 LSGAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 299
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ R
Sbjct: 300 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEARPQK 359
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 360 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 419
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 420 PIRVE-DGVVVQATV 433
>gi|319781544|ref|YP_004141020.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167432|gb|ADV10970.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 998
Score = 40.2 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 94/326 (28%), Gaps = 73/326 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F++ + T L R +L G I ++ ++ D F
Sbjct: 665 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 724
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFI-- 116
+ +++ + Y I V+ + + +
Sbjct: 725 VTTTTGGAPRVMNHMEDY---LQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEG 781
Query: 117 ----DERFSIADVL----------------------------------LHRTWGHNEKIA 138
DE V W +K
Sbjct: 782 IDMSDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHG 841
Query: 139 SDI---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ + H LR G + D T+ P+DA +D + K ++G ++R
Sbjct: 842 AAAYGTEAMHVLRAEKGYIIVGQD-TDGTVTPNDAGLDW--AVGKKKTDFVGIRGMARPD 898
Query: 196 HRNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAI 241
RK+ + + D + G+ I+ D + IG + + ALA+
Sbjct: 899 LVAKGRKQLVGLKTKDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSENCGRSIALAL 958
Query: 242 A--RIDKVDHAIKKGMALTVHGVRVK 265
D++ + M V V V
Sbjct: 959 VAGGRDRIGETLYVPMPNGVIEVEVT 984
>gi|307546036|ref|YP_003898515.1| sarcosine oxidase subunit alpha [Halomonas elongata DSM 2581]
gi|307218060|emb|CBV43330.1| sarcosine oxidase, alpha subunit [Halomonas elongata DSM 2581]
Length = 1012
Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L R + G ++ S + E+ F+
Sbjct: 678 STLGKIDIQGPDAREFLGRVYTNKWAKLAPGRVRYGLMCKDDGMVMDDGTTSCLAENHFL 737
Query: 67 LEIDRSKRDSLIDKL 81
+ ++++ L
Sbjct: 738 MTTSTGGAATVLEWL 752
>gi|86360700|ref|YP_472588.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42]
gi|86284802|gb|ABC93861.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42]
Length = 984
Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 63/302 (20%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL + L AR +L G I S+ +
Sbjct: 645 LCDVSTLGKIEIFGRDAATFLDRVYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 704
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
+ F + + ++ L F +++ P + +L+ +
Sbjct: 705 EHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 764
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDF------- 160
S+++F + R G +I+ + +EL + G + D
Sbjct: 765 EDISDAAFPFMSAREISLFGGRLEGRLFRISFSGERAYELAVPAGYGESVADAIMAAGEK 824
Query: 161 -------------------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ T+ P D + +S TK +IG+ +++R
Sbjct: 825 HGICAYGAEALGVLRIEKGHVTHAEINGTVTPGDLGFGRM--VSTTKLDFIGKAMLAREG 882
Query: 196 HRNIIRKRPMIITGTDDLPP--SGSPILTDDIEI------GTLGVVV------GKKALAI 241
++ R R + + + +GS IL + G + K LA+
Sbjct: 883 LQDPERPRLVGVMPLNPASSFRTGSHILAEGAAATLENDQGYVTSSAFSPTLGHKIGLAL 942
Query: 242 AR 243
R
Sbjct: 943 VR 944
>gi|163758120|ref|ZP_02165208.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43]
gi|162284409|gb|EDQ34692.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43]
Length = 379
Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 85/288 (29%), Gaps = 56/288 (19%)
Query: 11 FIKV-CGK--SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
I+ G A L+AI DVL L R +G + F+++ + +++
Sbjct: 62 LIRARSGDVTDAARALEAITPVDVLGLKPGRQRYGLFTNDKGGLEDDFMVANRGDHLYLV 121
Query: 68 EIDRSKRDSLIDKLLFYKLRSNVIIEIQ-----------PINGVVLSWNQEHTF------ 110
K + L + L + IE Q V+ S+ +
Sbjct: 122 VNAACKHEDLAR--IRTALSDSCEIEAQFGRGLIALQGPVAEAVLASYAPDAEDMLFMDV 179
Query: 111 -----SNSSFIDERFSIAD-------------VLLHRTWGHNEKIAS-DIKTYHELRINH 151
+ + R + + R ++++ + + LR+
Sbjct: 180 ADLKIGGTPVVVSRSGYSGEDGFEISIPADETERVARLLLADDRVEAIGLGARDSLRLEA 239
Query: 152 GIVDPNTDFLPSTIFPHDALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
G+ D T P +A + +G + G +V+ R R +
Sbjct: 240 GLCLYGNDI-DETTTPVEANLKWAIQKARRAGGEREGGFPGADVILNQFDTGPARLRVGL 298
Query: 207 ITGTDDLPPSGSPIL---TDDIEIGTLG------VVVGKKALAIARID 245
+G+ + + IGT+ V G A+ D
Sbjct: 299 QPSGKAPVRAGAELYDSESGGAAIGTVTSGGFGPSVGGPVAMGYVPAD 346
>gi|66045462|ref|YP_235303.1| aminomethyltransferase [Pseudomonas syringae pv. syringae B728a]
gi|63256169|gb|AAY37265.1| Aminomethyltransferase [Pseudomonas syringae pv. syringae B728a]
Length = 968
Score = 40.2 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
E F V L G ++ + H LR+ +V+ F
Sbjct: 760 LSAEAFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ +
Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLDMIIGMAYAAFDQSTPGQQI 939
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 940 PIRVE-DGVVVQATV 953
>gi|16182554|gb|AAL13520.1| GH04419p [Drosophila melanogaster]
Length = 329
Score = 40.2 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 5 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 64
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 65 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 122
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
SSF+ I +V + R E + +
Sbjct: 123 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 182
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D S P +A + L ++ + + G +V+ +
Sbjct: 183 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 239
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I + ++G +
Sbjct: 240 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 275
>gi|307731435|ref|YP_003908659.1| glycine cleavage system T protein [Burkholderia sp. CCGE1003]
gi|307585970|gb|ADN59368.1| glycine cleavage system T protein [Burkholderia sp. CCGE1003]
Length = 372
Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ F + + +V L A S +L P+G ++ ++ E F
Sbjct: 52 SHMCVVDFTGERVRAFFEYALANNVAKLQTPGRALYSCLLNPEGGVIDDLIVYYFGEQHF 111
Query: 66 ILEIDRSKRD 75
+ ++ D
Sbjct: 112 RVVVNAGTAD 121
>gi|87122243|ref|ZP_01078126.1| sarcosine oxidase, alpha subunit [Marinomonas sp. MED121]
gi|86162563|gb|EAQ63845.1| sarcosine oxidase, alpha subunit [Marinomonas sp. MED121]
Length = 1005
Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 30/77 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + GK A FL + T L R +L G I+ + S I +D FI
Sbjct: 670 STLGKIDIQGKDAREFLNRVYTNAWSKLAVGKCRYGLMLKEDGMIMDDGVTSCIADDHFI 729
Query: 67 LEIDRSKRDSLIDKLLF 83
L ++++ L
Sbjct: 730 LTTTTGGAANVLEWLEL 746
>gi|297180189|gb|ADI16410.1| uncharacterized nad(fad)-dependent dehydrogenases [uncultured
bacterium HF770_09N20]
Length = 994
Score = 40.2 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 19/211 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+++ I V G A FL + T LP AR +L G ++ ++ E
Sbjct: 656 LCDVTSLGKIAVQGPGATEFLNRVYTNPFAKLPIGKARYGIMLRDDGLVMDDGTTWRLSE 715
Query: 63 DTFILEIDRSKRDSLIDKL-LFYKLRS---NVIIEIQPINGVVLSWN--------QEHTF 110
+ + + ++ L + R V + ++ + +
Sbjct: 716 TDYFMTTTTAHAAKVMVWLEELLQTRWPDLKVHVTSVSEQWTGIAVAGPKSREVLEANVT 775
Query: 111 SNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVD----PNTDFLPSTIF 166
S +E F V+ G + I EL + P D L +++
Sbjct: 776 HPSEVSNEVFPFMGVIETILKGDIPCRIARISFSGELAYEVYVPADFGPPAMDRLWASVK 835
Query: 167 PHD---ALMDLLNGISLTKGCYIGQEVVSRI 194
+ ++ L + + KG G E+ R+
Sbjct: 836 AMEGCLYGLEALGAMRIEKGHVTGAELDGRV 866
>gi|254501203|ref|ZP_05113354.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
gi|222437274|gb|EEE43953.1| Glycine cleavage T-protein (aminomethyl transferase) [Labrenzia
alexandrii DFL-11]
Length = 966
Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S+ I V G A FL + + L AR +L G ++ ++ +
Sbjct: 629 CDVSSLGKIAVQGPDAAEFLNRVYSNGFAKLSVGKARYGIMLRDDGMVMDDGTTWRLADT 688
Query: 64 TFI 66
F+
Sbjct: 689 EFL 691
>gi|170579599|ref|XP_001894901.1| dimethylglycine dehydrogenase, mitochondrial precursor, putative
[Brugia malayi]
gi|158598353|gb|EDP36265.1| dimethylglycine dehydrogenase, mitochondrial precursor, putative
[Brugia malayi]
Length = 836
Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 50/258 (19%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE- 62
+ LS + I+V GK + L ++ + L +LT +G I + ++
Sbjct: 497 IDLSWRGKIEVRGKDSEKLLSYVLANEPPQL--GEVSSGLMLTKKGNIFGSLDLFHHDQY 554
Query: 63 -DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN----------QEHTFS 111
FIL D + ++ L + +EI ++ + S +E T S
Sbjct: 555 RSEFILLTDPERESRELNWLKRAAIEMEANVEISGVSEYLASLAIVGPKSREVLEELTKS 614
Query: 112 NSSFIDE-----RFSIADVLLHRTWGHNEKIASDI------------------------- 141
+ F R A V+ RT +++ ++
Sbjct: 615 DLGFKQNAARLMRLGSAPVIAVRTTDATGQLSYELYHSRGDTLGLYNSLMEVGKNYGIVN 674
Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
T + +RI +G + +T P++ + + + L K +IG+ + +
Sbjct: 675 FGQSTLNMMRIENGYKIWGRELTLNT-NPYECGLSQM--VDLNKENFIGKTSCMELSQKQ 731
Query: 199 IIRKRPMIITGTDDLPPS 216
RK+ ++I P S
Sbjct: 732 WNRKQVLLICEPLTEPQS 749
>gi|90418778|ref|ZP_01226689.1| sarcosine oxidase, alpha subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90336858|gb|EAS50563.1| sarcosine oxidase, alpha subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 993
Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 103/324 (31%), Gaps = 63/324 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S +++ G A FL + + L R + +L G I+ ++++I E+ F
Sbjct: 660 STLGKVELVGPDAGAFLDLMYATPLSRLAVGKCRYALMLNEAGFIIDDGIVARIAENRFH 719
Query: 67 LEIDRSKRDSLIDKLLFYKLR-----SNVIIEIQPINGVVLSWN---------------- 105
+ +++ + Y+ + I V+
Sbjct: 720 VTTTTGGAPRVLNLMEDYRQTEFPEMAVWTSSISEQWAVIAVQGPRARDLIAPFVEGLGI 779
Query: 106 QEHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASDI--KTYHELR---INHGIVD 155
F++ S + RF L R G + SD + LR + G+
Sbjct: 780 GPDAFAHMSVAECRFMGLPCRLFRVSFTGELGFEVNVPSDYGRSVWDTLRERGRSLGVEP 839
Query: 156 PNTDF----------------LPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
TD T+ P DA M +S K ++G+ + R
Sbjct: 840 YGTDAMHVLRAEKGYIIVGQETDGTVTPADAGMAW--AVSRKKADFVGKRGLERPDLSAP 897
Query: 200 IRKRPMIITGTDDL--PPSGSPILTDDIE------IGTLGVVVGKK------ALAIARID 245
RK+ + + + L G+ ++ D + +G + + ALA+ +
Sbjct: 898 GRKQLVGLKTANPLTVLEEGAQLVADPNQRVPMTMLGHVTSAYRSQTLGRSIALAMVKDG 957
Query: 246 KVDHAIKKGMALTVHGVRVKASFP 269
+ + + + V+ + P
Sbjct: 958 RKLVGQTLYVPMPTETIAVEVTEP 981
>gi|164656126|ref|XP_001729191.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966]
gi|159103081|gb|EDP41977.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966]
Length = 373
Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%)
Query: 121 SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISL 180
+ + + E + + LR+ G+ D ++ P + + G
Sbjct: 207 EATETVTQAILDNPEVQLAGLAARDSLRLEAGMCLYGHDL-DESVSPVEGALAWTVGKDR 265
Query: 181 T-KGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIE--IGTLGVVV--- 234
G ++G E V R R+R ++ G+ + T D + IG + +
Sbjct: 266 RVTGDFLGAERVLRELKEGPPRRRVGLLVSPGSPAREGTKVFTPDGKTHIGRITSGIPSP 325
Query: 235 ---GKKALAIA 242
A+A+
Sbjct: 326 TLGQNIAMALV 336
>gi|255291998|dbj|BAH90482.1| hypothetical protein [uncultured bacterium]
Length = 390
Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G A FLQ + A+ +P G ++ ++ +E F++
Sbjct: 78 LHVRGADAEAFLQFLSVNTFRNFGVGAAKQLLACSPDGFVIGDAILYHLEPAHFLV 133
>gi|227823426|ref|YP_002827399.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234]
gi|227342428|gb|ACP26646.1| sarcosine oxidase, alpha subunit [Sinorhizobium fredii NGR234]
Length = 997
Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 79/267 (29%), Gaps = 53/267 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL + T L R +L G + ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAQFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQE--------------- 107
+ ++ + Y V + V++
Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIAPLVEGIDL 783
Query: 108 --HTFSNSSFIDERFSIADVLLHR------------------------TWGHNEKIAS-- 139
F + S + R L R W E + +
Sbjct: 784 SNEAFPHMSVAEGRICGVPTRLFRMSFTGELGFEVNVPADYGQAVWEAIWARAEPMGACA 843
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ PHDA + +S K ++G + R
Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPHDAALSW--AVSKKKPDFVGIRGLKRPDLVK 900
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + G+ I+ D
Sbjct: 901 DGRKQLVGLLTKDPKVVLEEGAQIVAD 927
>gi|85705215|ref|ZP_01036314.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
217]
gi|85670088|gb|EAQ24950.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
217]
Length = 976
Score = 40.2 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + T TL R +L G ++ +++ E
Sbjct: 641 CDVSTLGKIDVQGPDAARFLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTCARMGET 700
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 701 HFVMTTTTAAAGQVMRHLEF 720
>gi|90423081|ref|YP_531451.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisB18]
gi|90105095|gb|ABD87132.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisB18]
Length = 384
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 61/304 (20%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ D+L + R + QG IL +++ L ++ + + +
Sbjct: 76 ADAARALERLVPQDILAIAPGRQRYAQFTNEQGGILDDLMVANSGR-HLFLVVNAACKAA 134
Query: 77 LIDKLL----------------------------FYKLRSNVI---------IEIQPING 99
L +L S V + + ++
Sbjct: 135 DEAHLRDGLSDVCDIVSRPDRALLALQGPHAEAALSRLCSQVDTLRFMDTAPLTVMGLDC 194
Query: 100 VV--LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPN 157
+V + E + S D ++A+ LL E + + LR+ G+
Sbjct: 195 LVSRSGYTGEDGYEISVPADGAVALAEALL----DDPEVLPIGLGARDSLRLEAGLCLYG 250
Query: 158 TDFLPSTIFPHDALMDL------LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
D ++ P +A ++ NG G + G V+ R+R +
Sbjct: 251 HDI-DASTTPVEAALEWSIQKSRRNG-GPRPGGFAGAAVILDQLETGAPRRRVGLRPDGR 308
Query: 212 DLPPSGSPILTDD---IEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGV 262
G+P+ DD IGT+ G A+ + H L +
Sbjct: 309 APVREGAPLFGDDSATDSIGTISSGGFGPSLGGPLAMGYLPTPQARHDAVIFAELRGQRL 368
Query: 263 RVKA 266
++
Sbjct: 369 PLRV 372
>gi|29135267|ref|NP_803451.1| aminomethyltransferase, mitochondrial precursor [Bos taurus]
gi|121084|sp|P25285|GCST_BOVIN RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|163771|gb|AAA30786.1| T-protein [Bos taurus]
gi|296474756|gb|DAA16871.1| aminomethyltransferase precursor [Bos taurus]
Length = 397
Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 82/277 (29%), Gaps = 58/277 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G + +++++ D+ L S G IL +++ E + +
Sbjct: 82 KIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAG 141
Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
R+ + L+ K+R S+V +E+ + L + D
Sbjct: 142 CREKDLT-LMQDKVRELQNKGSDVALEVMDNALLALQGPTAAQVLQAGVADDLRKLPFMT 200
Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149
E F ++ + R + E + + LR+
Sbjct: 201 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSLRL 260
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLL------NGISLTKGCYIGQEVVSRIQHRNIIRKR 203
G+ D P + + + G V+ Q ++ ++R
Sbjct: 261 EAGLCLYGNDI-DEHTTPVEGSLSWTLGKRRRAAMDF-----PGASVIV-PQLKSKAQRR 313
Query: 204 PMIITGTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239
+ + + SPIL+ + IG + L
Sbjct: 314 RVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCL 350
>gi|330974137|gb|EGH74203.1| aminomethyltransferase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 968
Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
E F V L G ++ + H LR+ +V+ F
Sbjct: 760 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ +
Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRHSVDILEAQPQK 879
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 940 PIRVE-DGVVVQATV 953
>gi|254438049|ref|ZP_05051543.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus
307]
gi|198253495|gb|EDY77809.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus
307]
Length = 1007
Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 30/68 (44%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G A FL + T + TLP R + G + ++++I+++T++
Sbjct: 681 VKGSDAGKFLDMMYTNMMSTLPIGKCRYGLMCGENGFLSDDGVVARIDDNTWLCHTTTGG 740
Query: 74 RDSLIDKL 81
D++ +
Sbjct: 741 ADTVHAHM 748
>gi|60677753|gb|AAX33383.1| RH05648p [Drosophila melanogaster]
Length = 409
Score = 39.8 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 85 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 144
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 145 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 202
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
SSF+ I +V + R E + +
Sbjct: 203 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 262
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D S P +A + L ++ + + G +V+ +
Sbjct: 263 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 319
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I + ++G +
Sbjct: 320 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 355
>gi|330957190|gb|EGH57450.1| glycine cleavage system aminomethyltransferase T [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 360
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + I V G A +L+ ++ DV L A SA+L G I+ ++ D +
Sbjct: 50 SHMNVIDVTGLQANAWLRYLLANDVDRLKTSGRALYSAMLDEAGGIIDDMIVYLTA-DGY 108
Query: 66 ILEIDRSKRDSLIDKLL 82
L ++ + + +
Sbjct: 109 RLVVNAANGAKDLAWMK 125
>gi|121634369|ref|YP_974614.1| glycine cleavage system aminomethyltransferase T [Neisseria
meningitidis FAM18]
gi|120866075|emb|CAM09813.1| putative aminomethyltransferase [Neisseria meningitidis FAM18]
Length = 368
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 54 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 110
>gi|325127669|gb|EGC50582.1| glycine cleavage system T protein [Neisseria meningitidis N1568]
gi|325131753|gb|EGC54454.1| glycine cleavage system T protein [Neisseria meningitidis M6190]
gi|325137643|gb|EGC60220.1| glycine cleavage system T protein [Neisseria meningitidis ES14902]
gi|325144038|gb|EGC66348.1| glycine cleavage system T protein [Neisseria meningitidis
M01-240013]
gi|325197786|gb|ADY93242.1| glycine cleavage system T protein [Neisseria meningitidis G2136]
Length = 366
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|240138213|ref|YP_002962685.1| putative Sarcosine oxidase alpha subunit [Methylobacterium
extorquens AM1]
gi|240008182|gb|ACS39408.1| putative Sarcosine oxidase alpha subunit [Methylobacterium
extorquens AM1]
Length = 1009
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++
Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 739 ANAARVMQHLEF 750
>gi|161869507|ref|YP_001598674.1| glycine cleavage system aminomethyltransferase T [Neisseria
meningitidis 053442]
gi|161595060|gb|ABX72720.1| aminomethyltransferase [Neisseria meningitidis 053442]
Length = 366
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|261393056|emb|CAX50651.1| glycine cleavage system T protein (aminomethyltransferase)
[Neisseria meningitidis 8013]
Length = 366
Score = 39.8 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|254560773|ref|YP_003067868.1| sarcosine oxidase subunit alpha [Methylobacterium extorquens DM4]
gi|254268051|emb|CAX23922.1| sarcosine oxidase, alpha subunit [Methylobacterium extorquens DM4]
Length = 1009
Score = 39.8 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++
Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFILDDGTIARMGETHYVMTAST 738
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 739 ANAARVMQHLEF 750
>gi|297172775|gb|ADI23740.1| uncharacterized NAD(FAD)-dependent dehydrogenases [uncultured
Rhodospirillales bacterium HF4000_38H21]
Length = 997
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R +L G I +I ++ +D F
Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWTKLAPGRTRYGLLLGDDGFIRDDGVIGRLSDDRFH 723
Query: 67 LEIDRSKRDSLID 79
+ +++
Sbjct: 724 ITTTTGGAARVLN 736
>gi|145543448|ref|XP_001457410.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425226|emb|CAK90013.1| unnamed protein product [Paramecium tetraurelia]
Length = 395
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +KV G+ + F++ + T D T + IL + I+ +++K +D
Sbjct: 70 SHMGQVKVFGEDRMKFVETLTTGDFQTKKSGQSVLCLILNEKAGIIDDTIVAKR-DDHIH 128
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ + + ++
Sbjct: 129 IVVNAGNKFIDMKQMDK 145
>gi|13474360|ref|NP_105928.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
gi|14025113|dbj|BAB51714.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
Length = 961
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 4/139 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ + + TL R +L+ G + ++ +++E F+
Sbjct: 630 STLGKIEVIGPKAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFV 689
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+ S ++ +L ++ R V I + L+ + + +D S+
Sbjct: 690 VSCSSSHVAAVHARLEEWRQDRFGREAVYIHNATSDMATLTVSGPNACKLLETVDLGLSL 749
Query: 123 ADVLLHRTWGHNEKIASDI 141
D L + D
Sbjct: 750 DDADLPHMAIGHGSYGGDA 768
>gi|59802899|sp|Q9JVP2|GCST_NEIMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|319409952|emb|CBY90279.1| glycine cleavage system T protein (aminomethyltransferase)
[Neisseria meningitidis WUE 2594]
gi|325203666|gb|ADY99119.1| glycine cleavage system T protein [Neisseria meningitidis
M01-240355]
Length = 366
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|218767697|ref|YP_002342209.1| glycine cleavage system aminomethyltransferase T [Neisseria
meningitidis Z2491]
gi|121051705|emb|CAM08008.1| putative aminomethyltransferase [Neisseria meningitidis Z2491]
Length = 368
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 54 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 110
>gi|13472722|ref|NP_104289.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
gi|14023469|dbj|BAB50075.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
Length = 997
Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 89/298 (29%), Gaps = 65/298 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F++ + T L R +L G I ++ ++ D F
Sbjct: 664 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQPI--NGVVLSWNQEHTF 110
+ +++ + Y L S +I +Q ++ +
Sbjct: 724 VTTTTGGAPRVMNHMEDYLQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEGIDM 783
Query: 111 SNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE------------ 146
S+ + + R R + N +
Sbjct: 784 SDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHGATA 843
Query: 147 --------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
LR G + D T+ P+DA +D + K ++G ++R
Sbjct: 844 YGTESMHVLRAEKGYIIVGQD-TDGTVTPNDAGLDW--AVGKKKTDFVGIRGMARSDLVA 900
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAIA 242
RK+ + + D + G+ I+ D + IG + + ALA+
Sbjct: 901 KGRKQLVGLKTRDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSQNCGRSIALALV 958
>gi|325135836|gb|EGC58448.1| glycine cleavage system T protein [Neisseria meningitidis M0579]
gi|325202637|gb|ADY98091.1| glycine cleavage system T protein [Neisseria meningitidis
M01-240149]
gi|325207617|gb|ADZ03069.1| glycine cleavage system T protein [Neisseria meningitidis NZ-05/33]
Length = 366
Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|219114339|ref|XP_002176340.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217402586|gb|EEC42576.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
Length = 421
Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 54/282 (19%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S +S+ I+ GK + FL+ ++ D+ +L + S + +G I+ +I+
Sbjct: 88 SLFDVSHMGQIRWHGKDRVAFLERVVVGDIASLKEGMGCLSLVTNEKGGIIDDTVITNAG 147
Query: 62 EDTFILEIDRSKRDSLIDKL--LFYKLRSNVIIEIQPINGVVLSWNQEHTFSN------S 113
+ F++ ++ + + + +V +E + +L+ ++ S
Sbjct: 148 DHVFMV-VNGATKFGDMKHFEEQMAVFDGDVTMEYLEDSMQLLAVQGPGAAASVAKLLPS 206
Query: 114 SFIDERFSIADVLLHRTWG-----------------------------------HNEKIA 138
F R G +
Sbjct: 207 DFDMTRMPFMSGRPTTLDGVDGCRITRCGYTGEDGFEIAMPTEHAVSIASKLMEDSSVNP 266
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK----GCYIGQE--VVS 192
+ + LR+ G+ D I P + ++ G + ++ G ++G E +
Sbjct: 267 TGLGARDSLRLEAGLCLYGNDL-NEDITPVEGVLGWTLGPAKSRRRTEGGFLGAEHILTP 325
Query: 193 RIQHRNIIRKRPMIITGTDDLPPSGSPIL--TDDIEIGTLGV 232
+ + + RKR + I G + I + +IG +
Sbjct: 326 DGKLQKVNRKR-VGIMGMKAPARDHTEIFDENGENKIGEVTS 366
>gi|330813961|ref|YP_004358200.1| aminomethyltransferase (glycine cleavage system T protein)
[Candidatus Pelagibacter sp. IMCC9063]
gi|327487056|gb|AEA81461.1| aminomethyltransferase (glycine cleavage system T protein)
[Candidatus Pelagibacter sp. IMCC9063]
Length = 364
Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 94/288 (32%), Gaps = 48/288 (16%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR--------------- 74
D+ L ++ S ++ QG I +++++ ++ + ++ + +
Sbjct: 76 DLSVLKMNQSKYSFLMNEQGGIDDDLIVTRV-KNGINIVLNAACKHSDVKTLKNILPNPD 134
Query: 75 -DSLIDKLLFYKLRSNVIIEIQP--INGVV---LSWNQEHTFSNSSFIDERFSIADVLLH 128
+L D L ++ + + I + GV E +++ + R +
Sbjct: 135 CATLHDHLALIAVQGPLAVSILEEIVPGVADLKFMNGGEFSYNGETIYITRSGYTGEDGY 194
Query: 129 RTWGHNEKIAS--------------DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
NEKI + LR+ G+ D T P +A DL
Sbjct: 195 EISISNEKITKLCEELLSKNKIAMIGLGARDSLRLEAGLCLYGHDL-DKTTSPIEA--DL 251
Query: 175 LNGISLTKGC---YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+ GI+ + ++G +VV + + RKR I + G+ I + E+G +
Sbjct: 252 MFGIAKNRRATFDFVGGDVVKAHVEKGVTRKRVGIKLEGKIIAREGAKIFQSEKEVGVVT 311
Query: 232 VVV------GKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ D + + + K +YK
Sbjct: 312 SGCFGPSVGSAVVIGYVNFDCSEEGTSVELEVRGKQYPAKICLLPFYK 359
>gi|167646326|ref|YP_001683989.1| sarcosine oxidase subunit alpha family protein [Caulobacter sp.
K31]
gi|167348756|gb|ABZ71491.1| sarcosine oxidase, alpha subunit family [Caulobacter sp. K31]
Length = 984
Score = 39.8 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 80/256 (31%), Gaps = 38/256 (14%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T TL AR +L G + ++ D
Sbjct: 648 CDVSTLGKIDIHGPDAGAFLDRLYTGTFSTLAVGRARYGVMLREDGFVFDDGTTTRFAPD 707
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGV-VLSWNQEHTFSNSSFIDERFSI 122
+ L ++ + Y V + P V +S ++ + + R I
Sbjct: 708 RYFLTTTTVNAGRVMQHID-YA--RQV---LWPELDVQAVSVTEQWASFSIAGPASRALI 761
Query: 123 ADVL--LHRTWGHNEKIASDIKTYH-------------ELRINHGIVDPNTDFLPSTIFP 167
AD+L + +A+ + EL + D L +F
Sbjct: 762 ADLLSGFDVSNASFAPMAAAELEWEGLPARLFRLSFSGELAYELCVPASAGDALVRRLFE 821
Query: 168 HDALM-------DLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPM---------IITGTD 211
A + L + + KG G E+ + ++ R M +++G
Sbjct: 822 LGAPYGVTPYGTEALGVMRIEKGHVAGPELNGQTTAADLGLGRMMSTKKDYIGRVLSGRP 881
Query: 212 DLPPSGSPILTDDIEI 227
L P+L + +
Sbjct: 882 ALVDPDRPVLVGLVPV 897
>gi|20129441|ref|NP_609441.1| CG6415 [Drosophila melanogaster]
gi|7297745|gb|AAF52996.1| CG6415 [Drosophila melanogaster]
Length = 405
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 59/276 (21%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ GK A L+++ TAD+L P + G IL +++K+ E + + +
Sbjct: 81 RIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAA 140
Query: 73 KRD-------SLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSN------------ 112
++ + +D +V IE + P + +++
Sbjct: 141 MKEQDMGIMKTAVDNFKSQG--KDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 198
Query: 113 -----SSFIDERFSIADVLLHRTWGHNEKIA------------------------SDIKT 143
SSF+ I +V + R E + +
Sbjct: 199 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 258
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC---YIGQEVVSRIQHRNII 200
LR+ G+ +D S P +A + L ++ + + G +V+ +
Sbjct: 259 RDSLRLEAGLCLYGSDI-DSKTTPVEAALAWL--VTKRRRTTRDFPGADVILGQLKEGVS 315
Query: 201 RKRP-MIITGTDDLPP-SGSPILTDDIEIGTLGVVV 234
R+R + + GT P SG I + ++G +
Sbjct: 316 RRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSGC 351
>gi|13476083|ref|NP_107653.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
gi|14026843|dbj|BAB53439.1| sarcosine oxidase alpha subunit [Mesorhizobium loti MAFF303099]
Length = 993
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 73/252 (28%), Gaps = 63/252 (25%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + L AR +L G + S++ ED
Sbjct: 655 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 714
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+ L +K ++ L F VL + ++ S +FSIA
Sbjct: 715 HYFLTTTTAKAGLVMQHLEF--------------CRQVLFPELDVQLTSVSDQWAQFSIA 760
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
A D+ + FP
Sbjct: 761 GPKTRDLLKEIVDPAEDLS--------------------NEGFP---------------- 784
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLP-PSGSPILTDDIEIGTLG--------VVV 234
++G V+ R I+ R I+ + ++ P + G L
Sbjct: 785 -FMGAREVA---LRGGIKARLFRISFSGEMAFEISVPARYGEAMAGNLMLAGKPFGVTPY 840
Query: 235 GKKALAIARIDK 246
G +AL + RI+K
Sbjct: 841 GTEALGVMRIEK 852
>gi|254512362|ref|ZP_05124429.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium KLH11]
gi|221536073|gb|EEE39061.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium KLH11]
Length = 819
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 56/168 (33%), Gaps = 9/168 (5%)
Query: 12 IKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
++V G A L +TA+ + + +L +G+I L I+++ D + L
Sbjct: 498 VEVSGPGAYALLDH--LTANRMPQKDGAITLTHMLNRRGRIELETTITRMAHDRYYLVCA 555
Query: 71 RSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRT 130
L+D L ++ +I + + + + + R
Sbjct: 556 AFFEQRLLDHLRNARIFDENSTDILNRSSQWSALSLNGPRARDVLAACTDADLSNAGFRW 615
Query: 131 WGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI 178
+ ++ + R+++ + P+ A +D+ +
Sbjct: 616 LSARQITVAEHDVW-AFRMSYA-----GELGWELHMPNAACLDVYTAL 657
>gi|296314946|ref|ZP_06864887.1| glycine cleavage system T protein [Neisseria polysaccharea ATCC
43768]
gi|296838142|gb|EFH22080.1| glycine cleavage system T protein [Neisseria polysaccharea ATCC
43768]
Length = 366
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|254673437|emb|CBA08791.1| glycine cleavage system T protein [Neisseria meningitidis alpha275]
Length = 366
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|221507757|gb|EEE33344.1| aminomethyltransferase, putative [Toxoplasma gondii VEG]
Length = 867
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ +
Sbjct: 499 SLFDLAFRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 557
Query: 62 EDTFILEIDRSKRDSLIDKL 81
D ++ + + ++ +L
Sbjct: 558 RDFLLIIGNACNKSKILSRL 577
>gi|221483265|gb|EEE21584.1| aminomethyltransferase, putative [Toxoplasma gondii GT1]
Length = 867
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S L+ + ++ G +A FL+ ++ D+ +L +R + QG I +++ +
Sbjct: 499 SLFDLAFRQHYRIRGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VH 557
Query: 62 EDTFILEIDRSKRDSLIDKL 81
D ++ + + ++ +L
Sbjct: 558 RDFLLIIGNACNKSKILSRL 577
>gi|222110934|ref|YP_002553198.1| glycine cleavage system t protein [Acidovorax ebreus TPSY]
gi|221730378|gb|ACM33198.1| glycine cleavage system T protein [Acidovorax ebreus TPSY]
Length = 376
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 34/76 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G A + ++ DV+ LP R +L +G I+ + ++ +D
Sbjct: 56 SHMGQLKLVGPDAAAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELF 115
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + + I +
Sbjct: 116 VIVNGACKVGDIAHIQ 131
>gi|13471285|ref|NP_102854.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022029|dbj|BAB48640.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 856
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 84/297 (28%), Gaps = 68/297 (22%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL----- 67
+V G A FL ++T + + ++ GK++ F I+K ED F++
Sbjct: 495 EVSGPGAEEFLNRLMTNRMPK--TGRIVLTPMINEFGKLIGDFTIAKAGEDRFMIWGSSA 552
Query: 68 -----------EIDRS--------------------KRDSLIDKLLFYKLRSNVIIEIQP 96
+ + K L+ KL V ++I
Sbjct: 553 AQKYHMRWFEKHLPKDGSVRIHRFDQTLVGLSIAGPKSRDLLQKL--------VDVDIST 604
Query: 97 INGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIAS 139
+ + + ++ R + L + W +
Sbjct: 605 KAFRFMDFREMAVGGAPCMVN-RITYTGDLGYEIWMAPAYQRLVYKAIKDAGEEFGLVDF 663
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
++ +R+ + P P + MD I L K +IG+E ++ Q
Sbjct: 664 GMRALLSMRLEKNFPTWFRELRP-IYGPFEGSMDRF--IKLEKNDFIGREAAAKEQAEGP 720
Query: 200 IRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARIDKVDHAIKKGMA 256
+R I D G + + G V R D ++ A
Sbjct: 721 KLRRVSFIVDAADADVMGDEPIWAKVSK-DYGTVEKPHGYGAPRFDDKGKEVRGSKA 776
>gi|325141797|gb|EGC64245.1| glycine cleavage system T protein [Neisseria meningitidis 961-5945]
Length = 276
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|319639334|ref|ZP_07994085.1| aminomethyltransferase [Neisseria mucosa C102]
gi|317399518|gb|EFV80188.1| aminomethyltransferase [Neisseria mucosa C102]
Length = 366
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|282859538|ref|ZP_06268643.1| tRNA modification GTPase TrmE [Prevotella bivia JCVIHMP010]
gi|282587766|gb|EFB92966.1| tRNA modification GTPase TrmE [Prevotella bivia JCVIHMP010]
Length = 446
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFL--ISK-----IE 61
I++ G AIPF+ +I + D+ + IL GK++ + + +
Sbjct: 16 LGIIRIAGSEAIPFVNSIFSKDITSAKANTIHYGNILDQSGKVIDEVVVSLWRAPHSYTG 75
Query: 62 EDTFILEIDRS 72
ED + S
Sbjct: 76 EDAIEISCHGS 86
>gi|304388192|ref|ZP_07370313.1| glycine cleavage system T protein [Neisseria meningitidis ATCC
13091]
gi|304337803|gb|EFM03951.1| glycine cleavage system T protein [Neisseria meningitidis ATCC
13091]
Length = 366
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|255067565|ref|ZP_05319420.1| glycine cleavage system T protein [Neisseria sicca ATCC 29256]
gi|255048186|gb|EET43650.1| glycine cleavage system T protein [Neisseria sicca ATCC 29256]
Length = 366
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|254486681|ref|ZP_05099886.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
gi|214043550|gb|EEB84188.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
Length = 806
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 93/286 (32%), Gaps = 66/286 (23%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +SN + + G A +L ++ + + + ++ +G I F ++++ ED
Sbjct: 481 IDISNFAKYRCAGPGAEDWLNSLFANTMPK-AVGRSCLTPLIGVRGGIAGDFTVTRMAED 539
Query: 64 TFILE-----------------------------------IDRSKRDSLIDKLL------ 82
F + + K ++ +L
Sbjct: 540 EFWIIGSGMAERYHQRFFNALPLPDGTIFESRTVDMCGFNVAGPKSREMLQRLTNTSFET 599
Query: 83 --FYKLRSN-VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS 139
F +RS V + + + +S+ + + +++ + LL
Sbjct: 600 ADFPFMRSKWVEMAGIRVLALRVSFTGDLGWELHCATEDQPQLYAALLE-AGRDLGAGPV 658
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI 199
+ LRI G ++ P +P + +D L C + +E +++ ++
Sbjct: 659 GSRALMSLRIEKGYGSWGREYSPE-YWPQEVGLDRL--------CKLDKEFLNKAAVMDV 709
Query: 200 I----RKRPMIITGTDDL-------PPSGSPILTDDIEIGTLGVVV 234
+ R+R +++ D G PI D + +G +
Sbjct: 710 LEKPARERLVVLALDADATDASNADATGGEPIFKDGVGVGRVTSGA 755
>gi|319780026|ref|YP_004139502.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317165914|gb|ADV09452.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 958
Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ + + TL R +L+ G + ++ +++E FI
Sbjct: 627 STLGKIEVIGPQAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFI 686
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHT 109
+ S ++ +L ++ RS V I + L+ + +
Sbjct: 687 VSCSSSHVAAVHARLEEWRQDRFGRSAVYIHNATPDMATLTVSGPNA 733
>gi|309379578|emb|CBX21749.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 366
Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|260459585|ref|ZP_05807839.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
gi|259034387|gb|EEW35644.1| FAD dependent oxidoreductase [Mesorhizobium opportunistum WSM2075]
Length = 812
Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 88/307 (28%), Gaps = 57/307 (18%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-IDR 71
+V G A +L I+ + L + LTP G + ++++++ D F L R
Sbjct: 497 EVSGPGAERWLDGILANRLPKL--GRIALAHHLTPAGGVQAEYVVARLGSDLFYLVSTPR 554
Query: 72 SKR---DSLIDKLLFYK---LR----------------SNV-----IIEIQPINGVVLSW 104
++R D L L LR V I++ S
Sbjct: 555 AERWNHDDLSRLLPMDGSVHLRNVTNDRGSFTVVGPKAREVLQPLTEIDLSNEAFPWFSV 614
Query: 105 NQEHTFSNSSFIDERFSIADVLLHRTW-----------------GHNEKIASDIKTYHEL 147
S R + + L + + ++ L
Sbjct: 615 RSATVGLASDVRLMRVNYSGELGWELYHPLCYQRHLLDALLASGQAHGLRLVGLQALESL 674
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R++ D ++ +D + L KG +IG+ ++ Q + R+ +
Sbjct: 675 RLDKSYRAMYRDMNLELSAW-ESGLDRF--VRLDKGDFIGRAALAAKQKQGTTRRIVTLS 731
Query: 208 TGTDDLPPSGSP-ILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260
TD + D +G + ALA+ + +++
Sbjct: 732 IDTDGASAFAYEGVYRDGKLVGRVTSAGYSYTFGHDIALALLPAELGTPGTALEVSILGE 791
Query: 261 GVRVKAS 267
K
Sbjct: 792 RRPAKVI 798
>gi|158423118|ref|YP_001524410.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571]
gi|158330007|dbj|BAF87492.1| sarcosine oxidase alpha subunit [Azorhizobium caulinodans ORS 571]
Length = 987
Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 76/253 (30%), Gaps = 63/253 (24%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +S I V G A FL + +L AR +L G ++ +++E
Sbjct: 648 LIDVSTFGKIDVQGPDAAVFLDRVYINTFSSLSVGKARYGVMLREDGIVMDDGTTARLEP 707
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
D FI+ + + L F + + W + +D + +
Sbjct: 708 DHFIMTTTTANAAKVFQHLEF---------------CLQVLWPE---------LDVQLAS 743
Query: 123 ADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK 182
+ K + +VD N D + P
Sbjct: 744 VSEQWAQISISGPK---------SREVLAKVVDANVD-VSGEALP--------------- 778
Query: 183 GCYIGQEVVSRIQHRNIIRKRPMIITGTDDL-------PPSGSPILTDDIEIGTLGVVV- 234
Y+G V + ++ R ++ +L G + + G +
Sbjct: 779 --YMG---VLQASVMGGVKARIFRLSFAGELGYEIAVSASHGEELTRALMSAGEPFGITP 833
Query: 235 -GKKALAIARIDK 246
G +ALA+ RI+K
Sbjct: 834 YGTEALAVMRIEK 846
>gi|28493605|ref|NP_787766.1| aminomethyltransferase [Tropheryma whipplei str. Twist]
gi|28476647|gb|AAO44735.1| aminomethyltransferase [Tropheryma whipplei str. Twist]
Length = 356
Score = 39.8 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 52/216 (24%)
Query: 6 LSNQSFIKVCGKSAIPFLQAI-----ITADVLTLPYKIARGSAILTPQGKILLYFLISKI 60
LS+ + I V G +A + +T + A+ + IL QG I ++ +I
Sbjct: 51 LSHMAEIFVSGVNA-----GLELDIALTGHFSDMTCGRAKYTLILNEQGGIEDDLIVYRI 105
Query: 61 EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
++ +++ + R + L S++ E I+ V + + + F
Sbjct: 106 DDKNYMVVANGINRKKVFSLLRDRVHTSDIKDETDSISLVAVQGPESESLIRDLFHESGN 165
Query: 116 -----------------------IDERFSIAD-------------VLLHRTWGHNEKIAS 139
I R V + R
Sbjct: 166 LRYFSHRCYPHGGTDRSEKLSCSIVARTGYTGEDGFEIFTPNDSVVSIWRALIERGATPC 225
Query: 140 DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLL 175
+ + LRI G+ + + + P A ++
Sbjct: 226 GLAARNTLRIEAGMPLYGHEL-RADLNPVQAGLERF 260
>gi|298370093|ref|ZP_06981409.1| glycine cleavage system T protein [Neisseria sp. oral taxon 014
str. F0314]
gi|298281553|gb|EFI23042.1| glycine cleavage system T protein [Neisseria sp. oral taxon 014
str. F0314]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|261379960|ref|ZP_05984533.1| glycine cleavage system T protein [Neisseria subflava NJ9703]
gi|284797158|gb|EFC52505.1| glycine cleavage system T protein [Neisseria subflava NJ9703]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|261378007|ref|ZP_05982580.1| glycine cleavage system T protein [Neisseria cinerea ATCC 14685]
gi|269145879|gb|EEZ72297.1| glycine cleavage system T protein [Neisseria cinerea ATCC 14685]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|218680472|ref|ZP_03528369.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CIAT 894]
Length = 530
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 18/199 (9%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ G+ A FL + L AR +L G I S+ +
Sbjct: 284 LCDVSTLGKIEIFGRDAATFLDRVYCNGFSKLALGKARYGIMLREDGFIYDDGTTSRFSD 343
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQ---------------PINGVVLSWNQE 107
D F + + ++ L F +++ P + +L+ +
Sbjct: 344 DHFFMTTTTALAAGVLTHLEFCAQTLWPELDVCFASSTDQWAQMAVAGPKSRAILAEIVD 403
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFP 167
S+++F + R G +I+ + +EL + G + D + +
Sbjct: 404 EDISDAAFPFMSARKVSLFAGRLEGRLFRISFSGELAYELAVPAGYGESVADAIMAAGEK 463
Query: 168 H---DALMDLLNGISLTKG 183
H ++ L + + KG
Sbjct: 464 HGISAYGVEALGVMRIEKG 482
>gi|254390744|ref|ZP_05005957.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|197704444|gb|EDY50256.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 816
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ FLQ + T + P + +L + I ++++ ED F L
Sbjct: 505 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 560
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106
+ + +D LL + + V I +I + W
Sbjct: 561 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 595
>gi|121594298|ref|YP_986194.1| glycine cleavage system T protein [Acidovorax sp. JS42]
gi|120606378|gb|ABM42118.1| glycine cleavage system T protein [Acidovorax sp. JS42]
Length = 376
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 34/76 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G A + ++ DV+ LP R +L +G I+ + ++ +D
Sbjct: 56 SHMGQLKLVGPDAAAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELF 115
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + + I +
Sbjct: 116 VIVNGACKVGDIAHIQ 131
>gi|308388760|gb|ADO31080.1| glycine cleavage system aminomethyltransferase T [Neisseria
meningitidis alpha710]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|294812677|ref|ZP_06771320.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294325276|gb|EFG06919.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 840
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ FLQ + T + P + +L + I ++++ ED F L
Sbjct: 529 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 584
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106
+ + +D LL + + V I +I + W
Sbjct: 585 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 619
>gi|254804457|ref|YP_003082678.1| glycine cleavage system T protein [Neisseria meningitidis alpha14]
gi|254667999|emb|CBA04335.1| glycine cleavage system T protein [Neisseria meningitidis alpha14]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|225077404|ref|ZP_03720603.1| hypothetical protein NEIFLAOT_02465 [Neisseria flavescens
NRL30031/H210]
gi|224951264|gb|EEG32473.1| hypothetical protein NEIFLAOT_02465 [Neisseria flavescens
NRL30031/H210]
Length = 366
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|326441169|ref|ZP_08215903.1| sarcosine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 803
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
++V G A+ FLQ + T + P + +L + I ++++ ED F L
Sbjct: 492 LEVTGPGALAFLQRMTTNQLAR-PVGSVSYTLLLDERAGIRSDLTVTRLGEDRFQL---G 547
Query: 72 SKRDSLIDKLLFYKLRSNVII-EIQPINGVVLSWNQ 106
+ + +D LL + + V I +I + W
Sbjct: 548 ANTPADLDWLLRHA-PAAVQIRDITSGTCCIGVWGP 582
>gi|254671484|emb|CBA09047.1| glycine cleavage system T protein [Neisseria meningitidis alpha153]
Length = 366
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|241759409|ref|ZP_04757513.1| glycine cleavage system T protein [Neisseria flavescens SK114]
gi|241320191|gb|EER56524.1| glycine cleavage system T protein [Neisseria flavescens SK114]
Length = 366
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|261366008|ref|ZP_05978891.1| glycine cleavage system T protein [Neisseria mucosa ATCC 25996]
gi|288565395|gb|EFC86955.1| glycine cleavage system T protein [Neisseria mucosa ATCC 25996]
Length = 366
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|15676479|ref|NP_273618.1| glycine cleavage system aminomethyltransferase T [Neisseria
meningitidis MC58]
gi|11132399|sp|Q9K0L8|GCST_NEIMB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|7225802|gb|AAF41002.1| glycine cleavage system T protein [Neisseria meningitidis MC58]
gi|316985444|gb|EFV64392.1| glycine cleavage system T protein [Neisseria meningitidis H44/76]
gi|325133909|gb|EGC56565.1| glycine cleavage system T protein [Neisseria meningitidis M13399]
gi|325139774|gb|EGC62307.1| glycine cleavage system T protein [Neisseria meningitidis CU385]
gi|325200738|gb|ADY96193.1| glycine cleavage system T protein [Neisseria meningitidis H44/76]
gi|325206575|gb|ADZ02028.1| glycine cleavage system T protein [Neisseria meningitidis
M04-240196]
Length = 366
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|171319388|ref|ZP_02908496.1| glycine cleavage system T protein [Burkholderia ambifaria MEX-5]
gi|171095387|gb|EDT40362.1| glycine cleavage system T protein [Burkholderia ambifaria MEX-5]
Length = 372
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I V L A S +L PQG ++ ++ ED F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|319950638|ref|ZP_08024542.1| hypothetical protein ES5_13655 [Dietzia cinnamea P4]
gi|319435680|gb|EFV90896.1| hypothetical protein ES5_13655 [Dietzia cinnamea P4]
Length = 195
Score = 39.8 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S++ + + G + +L+ ++ V + + +L G+I + +++ ++ T +
Sbjct: 55 SHRDVLTIGGGERLTWLEGFVSQHVADIGDGGGGETLVLDANGRIEHHAVLADVDA-TVV 113
Query: 67 LEIDRSKRDSLIDKLLFYKL 86
++ + + SL+ L
Sbjct: 114 MDTEPGRGASLLQFLTKMVF 133
>gi|150397948|ref|YP_001328415.1| sarcosine oxidase subunit alpha family protein [Sinorhizobium
medicae WSM419]
gi|150029463|gb|ABR61580.1| sarcosine oxidase, alpha subunit family [Sinorhizobium medicae
WSM419]
Length = 997
Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 65/323 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL + T L R +L G + ++ ++ +D F
Sbjct: 664 STLGKIEVVGPDAAAFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLADDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE---- 118
+ ++ + Y V + V++ + + E
Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPRAREIIAPLVEGIDL 783
Query: 119 -----------------------RFSIADVLL--------------HRTWGHNEKIAS-- 139
R S L W E + +
Sbjct: 784 SKEAFPHMSVAEGSICGVPTRLFRMSFTGELGFEVNVPADFGQAVWEAIWARAEPMGACA 843
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P DA + +S K ++G + R
Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPEDAGLSW--AVSKKKPDFVGIRGMKRPDLVK 900
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGV------VVGKKALAIARI 244
RK+ + + D + G+ I+ D + +G + ALA+
Sbjct: 901 EGRKQLVGLLAKDPQVVLEEGAQIVADPNQPKPMTMLGHVTSSYWSPNCGRSIALAVVAG 960
Query: 245 DKVDHAIKKGMALTVHGVRVKAS 267
+ H + + + V+ S
Sbjct: 961 GRARHGQTLYVPMADRTIAVEVS 983
>gi|89069878|ref|ZP_01157212.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
granulosus HTCC2516]
gi|89044554|gb|EAR50673.1| sarcosine oxidase, alpha subunit family protein [Oceanicola
granulosus HTCC2516]
Length = 972
Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 2/113 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + + TL R +L G ++ +++ ++
Sbjct: 644 STLGKIDVQGPDAAAFLDFVYANRMSTLAEGRVRYGIMLREDGFVMDDGTCARLGPAHYL 703
Query: 67 LEIDRSKRDSLIDKLLFYK--LRSNVIIEIQPINGVVLSWNQEHTFSNSSFID 117
+ + ++ L F + LR ++ + I + + + D
Sbjct: 704 VTTTTAAAGQVMRHLDFARQVLRPDLDVGIASATEQWAQFAVAGPRAGALLAD 756
>gi|15966606|ref|NP_386959.1| putative sarcosine oxidase alpha subunit transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307300359|ref|ZP_07580139.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
BL225C]
gi|307319642|ref|ZP_07599068.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
AK83]
gi|15075878|emb|CAC47432.1| Putative sarcosine oxidase alpha subunit transmembrane protein
[Sinorhizobium meliloti 1021]
gi|306894764|gb|EFN25524.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
AK83]
gi|306904525|gb|EFN35109.1| sarcosine oxidase, alpha subunit family [Sinorhizobium meliloti
BL225C]
Length = 997
Score = 39.4 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 78/267 (29%), Gaps = 53/267 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL + T L R +L G + ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAEFLNLMYTNAWDNLKPGRCRYGIMLRDDGFVYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYKL----RSNVIIEIQPINGVVLSWNQE--------------- 107
+ ++ + Y V + V++
Sbjct: 724 VTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIAPLVEGIDL 783
Query: 108 --HTFSNSSFIDERFSIADVLLHR------------------------TWGHNEKIAS-- 139
F + S + R L R W E + +
Sbjct: 784 SNEAFPHMSVAEGRICGVPTRLFRMSFTGELGFEVNVPADYGQAVWEAIWARAEPMGACA 843
Query: 140 -DIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P DA + +S K ++G + R
Sbjct: 844 YGTETMHVLRAEKGYIIVGQD-TDGTLTPDDAGLSW--AVSKKKQDFVGIRGMKRPDLVK 900
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + G+ I+ D
Sbjct: 901 EGRKQLVGLLTKDPQVVLEEGAQIVAD 927
>gi|312881987|ref|ZP_07741741.1| sarcosine oxidase, alpha subunit [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370282|gb|EFP97780.1| sarcosine oxidase, alpha subunit [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 1007
Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + GK A FL + T L R + G I + S I ++ FI
Sbjct: 672 STLGKIDIQGKDAREFLNRVYTNAWSKLEPGRCRYGIMCKDDGMIFDDGVTSCISDNHFI 731
Query: 67 LEIDRSKRDSLIDKLLF 83
+ +++D L
Sbjct: 732 MTTTSGGAAAVLDWLEL 748
>gi|294084911|ref|YP_003551671.1| putative aminomethyltransferase (glycine cleavage system t protein)
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664486|gb|ADE39587.1| putative aminomethyltransferase (glycine cleavage system t protein)
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 376
Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 64/283 (22%)
Query: 1 MSSVYLSNQSFIKVCGKS-AIPFLQAIIT-ADVLTLPYKIARGSAILTPQGKILLYFLIS 58
M+ + L + G A + A +T D+ + R S L G +L +I+
Sbjct: 54 MAQISLDS------VGDDKAADAMLAQLTPTDLGLINEGRVRYSMFLDDNGGVLDDLMIA 107
Query: 59 KIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT--------- 109
+++ L + + D I L + L +V + + ++ +
Sbjct: 108 RLDG-RLQLVANAGRADHDIAHLKAH-LGEHVRMTVHDDLSLIALQGPKAATVLEDLGIK 165
Query: 110 ----FSNSSFIDERFS---------------------------IADVLLHRTWGHNEKIA 138
+N +F+D R + + HN+
Sbjct: 166 LDVDMANFAFMDIRHATLMGTKVTLTRSGYTGEDGFEISIPNTAVVEITTALAAHNDVHL 225
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSR 193
+ LR+ G+ + TI P +A + G +L+K G + G +
Sbjct: 226 VGLGARDTLRMEAGLPLWGHEL-SETINPVEAGL----GFALSKRRRDAGDFPGANPILA 280
Query: 194 IQHRNIIRKRPMIITGTDDLPPSGSPILTDDI----EIGTLGV 232
+ RK ++ G+ + D EIG +
Sbjct: 281 DLNNGPARKLVGLLPEGGRPVRDGTILKHGDEGDETEIGFVSS 323
>gi|163739832|ref|ZP_02147239.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
BS107]
gi|161386866|gb|EDQ11228.1| aminomethyl transferase family protein [Phaeobacter gallaeciensis
BS107]
Length = 815
Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 93/312 (29%), Gaps = 52/312 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L S + G+ A FL+ ++T + + + +G+IL + ED F
Sbjct: 501 LPGFSRFNLSGEGAAEFLRGLVTGGLPKVGRMNLVYVS--DDRGRILTEMSCIRHGEDHF 558
Query: 66 ILEIDRSKR---DSLIDKLLFYKLR-----------------SN---VIIEIQPINGVVL 102
+ S + ++ K L LR S I ++ L
Sbjct: 559 TMITAGSAQWHDFEILKKALPAGLRLTDHTTEFATMIVTGPQSRDLFAGISDADLSLGWL 618
Query: 103 SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHE-------------LRI 149
+ + +F+ R S A L NE + LRI
Sbjct: 619 THQEATVAGKPAFL-ARVSYAGELGWEVHCANEHQPAIYDALLAGGAKPFGMYALNSLRI 677
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRP-MII 207
G D + ++ + L K + G+ + + + + + +I+
Sbjct: 678 EKGYRTWKGDLSTDYSL-LEGGLERF--VKLDKPQDFPGKAAIQSEKQQGVKKSFVTLIV 734
Query: 208 TGTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHG 261
D P S I D +G V AL + R D + + +
Sbjct: 735 EAGDADAPYMSCIWKDGEIVGETTSGDWGYRVNASIALGMVRSDAAVPGTELEVEIYGEK 794
Query: 262 VR--VKASFPHW 271
R V+ P W
Sbjct: 795 FRAVVQEDKPLW 806
>gi|186472191|ref|YP_001859533.1| sarcosine oxidase alpha subunit family protein [Burkholderia
phymatum STM815]
gi|184194523|gb|ACC72487.1| sarcosine oxidase, alpha subunit family [Burkholderia phymatum
STM815]
Length = 999
Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 80/266 (30%), Gaps = 54/266 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAAKLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVIIEIQ-PING 99
+ ++ + K+R V+ ++ I+
Sbjct: 725 MTTTTGGAARVLTWMERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCSDIDF 784
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIKT 143
++ + T + R S + L W + DI
Sbjct: 785 ANEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANMGRAVWEALMAAGAEFDITP 844
Query: 144 Y-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
Y H LR G + D ++ PHD M G+ ++G+ ++R
Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGSVTPHDLGM---GGLVAKTKDFLGRRSLARSDTTK 900
Query: 199 IIRKRPMIITGTDD--LPPSGSPILT 222
RK+ + + D + P GS I+
Sbjct: 901 DNRKQFVGLLSDDPQFVIPEGSQIVA 926
>gi|254500876|ref|ZP_05113027.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11]
gi|222436947|gb|EEE43626.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11]
Length = 383
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 55/306 (17%)
Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66
+ G L+A+ ++ + L + R + +L G I+ ++++ ++ +
Sbjct: 66 LIGPDHETTAKALEALTPSNFVELGHGRQRYTVLLNEDGGIIDDLMVTRPLDKNDDGRLL 125
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L ++ +++D L L V +E+ ++ E
Sbjct: 126 LVVNAARKDIDYAHLRA-NLPDTVKLEVADDRALIAVQGPEAVAAVAAHAPAAAELGFMA 184
Query: 110 ------------FSNSSFIDERFSIADVLLHRTWGHNEKIASD-------IKTYHELRIN 150
+ + + E V + +D + LR+
Sbjct: 185 AAPMEFDGIACHIARAGYTGEDGVEMSVPAGAAEAIARALLADDRVEAIGLGARDSLRLE 244
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIIT 208
G+ D T P + + + +G ++G E + + R R + +
Sbjct: 245 AGLCLYGHDI-DETTSPVEGNITFCMQKRRRDEGGFLGAERIQKELADGTDRIRVGLRLD 303
Query: 209 GTDDLPPSGSPILTDDIEIGTLGV------VVGKKALAIARIDKVDHAIKKGMALTVHGV 262
G L D IG+L V A+ + + + L V
Sbjct: 304 GKAPAREGAEIALPDGDVIGSLTSGGFAPTVGAPIAMGYVPAEHASEGTQ--LELIVRNR 361
Query: 263 RVKASF 268
R+ A+
Sbjct: 362 RLPATV 367
>gi|152967989|ref|YP_001363773.1| glycine cleavage system T protein [Kineococcus radiotolerans
SRS30216]
gi|151362506|gb|ABS05509.1| glycine cleavage system T protein [Kineococcus radiotolerans
SRS30216]
Length = 391
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 44/329 (13%), Positives = 95/329 (28%), Gaps = 83/329 (25%)
Query: 6 LSNQSFIKVCGKS----------AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYF 55
LS+ I+V G P + A ++ +G I+
Sbjct: 70 LSHMGEIRVSGPQAGAALDAALAGRP----------SAMAIGRAAYGLLVDHEGGIVDDL 119
Query: 56 LISKIEEDTFILEIDRSKRD----SLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEH--- 108
+ ++ E F++ + + + +L D+ + + + + +++
Sbjct: 120 VTYRLGEQEFLVVANAANVEPVVVALADRARPF----DAHVADETARWALVAVQGPASAA 175
Query: 109 -----------------TFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTY 144
+ +VLL RT E + + +
Sbjct: 176 IVGPLVDADLTALGYYRCAPATLTTGPGAPGVEVLLARTGYTGEDGFEVFVPVDDAVAAW 235
Query: 145 HE--------------------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC 184
LR+ G+ + +T P A + + + G
Sbjct: 236 DALLAATREHGGVPAGLACRDTLRLEAGMPLYGHELTTATS-PFAAGLGRVVKLDKDPGP 294
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGVVVGKKAL---- 239
+G E + R+ R + + GT P +G P++ +G + L
Sbjct: 295 -VGLEALQRLAATPPAR-VLVGLRGTGRRAPRAGYPVVAGGSPVGEVTSGALSPTLGYPV 352
Query: 240 AIARIDKVDHAIKKGMALTVHGVRVKASF 268
A+A +D A +A+ V G +
Sbjct: 353 AMAYVDAALSAPGTALAVDVRGTELPVEV 381
>gi|294012768|ref|YP_003546228.1| aminomethyltransferase [Sphingobium japonicum UT26S]
gi|292676098|dbj|BAI97616.1| aminomethyltransferase [Sphingobium japonicum UT26S]
Length = 389
Score = 39.4 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 100/315 (31%), Gaps = 62/315 (19%)
Query: 7 SNQSFIKVCGK---SAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
S+ + G+ A+ L + +D+ L R S +L +G IL ++S++ +
Sbjct: 70 SHMGQLGFSGEGVDDALEIL---LPSDIKGLKPFRQRYSMLLDEEGGILDDLMVSRLGDG 126
Query: 64 TF-----ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
F + ++ + + + ++ + L V++ ++ E + ++ I E
Sbjct: 127 AFGGADIYMVVNGATKYDDMGWMIEH-LPDEVVMNHMDEQALLALQGPEAGEALATLIPE 185
Query: 119 -------RFSIADVLLHRTWGHNEKIASD-----------------------------IK 142
+ + W + +
Sbjct: 186 TADLIFMQSGLFTWRGVPLWISRSGYTGEDGFEISVPAADAALLADALCALPQVKPIGLG 245
Query: 143 TYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRNI 199
LR+ G+ D P+ DL I + G +IG V +
Sbjct: 246 ARDSLRLEAGLPLYGHDLTPAVS---TIGADLGFAIQKRRREEGGFIGHARVMKELADGP 302
Query: 200 IRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVV-----VGKKALAIARIDKVDHAIKK 253
KR + + LP G+PI +G + VG +A+ + AI
Sbjct: 303 GSKR-VGLRIQGRLPAREGAPIFAGGARVGEVTSGGFAPTVGAP-IAMGWVSLPHSAIGA 360
Query: 254 GMALTVHGVRVKASF 268
+ + V G R+ A
Sbjct: 361 ALEIEVRGKRIAAEV 375
>gi|152996771|ref|YP_001341606.1| sarcosine oxidase subunit alpha family protein [Marinomonas sp.
MWYL1]
gi|150837695|gb|ABR71671.1| sarcosine oxidase, alpha subunit family [Marinomonas sp. MWYL1]
Length = 1010
Score = 39.4 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + GK A FL + T LP R + G + + S + E+ F+
Sbjct: 676 STLGKIDIQGKDAREFLGRVYTNAWAKLPVGKCRYGLMCGEDGMVFDDGVTSCLAENHFL 735
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ L Y
Sbjct: 736 MTTTSGGAARVLSWLEIY 753
>gi|332186698|ref|ZP_08388441.1| sarcosine oxidase, alpha subunit [Sphingomonas sp. S17]
gi|332013350|gb|EGI55412.1| sarcosine oxidase, alpha subunit [Sphingomonas sp. S17]
Length = 993
Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 95/326 (29%), Gaps = 70/326 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ L R +L G +L ++ ++ D F
Sbjct: 663 STLGKIEVVGPDAAEFMNRFFVNAWTKLGVGKCRYGVLLREDGFVLDDGVVGRLAADRFH 722
Query: 67 LEIDRSKRDSLIDKLLFYKL-------------------------RSNVIIEIQPINGVV 101
+ +++ + Y R+ +I I G+
Sbjct: 723 VTTTTGGAARVLNMMEDYLQTEWPNLNVWLTSTTEQWSVIAVQGPRAREVIAPL-IEGLD 781
Query: 102 LSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEK------------------------- 136
+S F + S D R + L R E
Sbjct: 782 VS---AEAFPHMSIADARICGVPMRLMRVSFTGELGFEVNVPSGYGRMVWEAIWERGKTC 838
Query: 137 --IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRI 194
+A +T H LR G + + T+ P D + I K ++G+ ++R
Sbjct: 839 DMVAYGTETMHVLRAEKGYIIVGQE-TDGTVTPDDVGLSW--AIGKAKPDFVGKRSLARP 895
Query: 195 QHRNIIRKRPMIITGTDD--LPPSGSPILTD---DIEIGTLGVVV------GKKALAIAR 243
RK+ + + D + G+ ++ IG + ALA+ R
Sbjct: 896 AMAAPDRKQLVGLRSKDGRSVLEEGAQVVAPSAPGTPIGHVTSSYYSAVLDAPIALALVR 955
Query: 244 IDKVDHAIKKGMALTVHGVRVKASFP 269
+ + + + V+ P
Sbjct: 956 GGRARMGETLHIPMPGGAIPVEIVQP 981
>gi|316932873|ref|YP_004107855.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1]
gi|315600587|gb|ADU43122.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1]
Length = 382
Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+A+I D++ LP R + G IL +++ +
Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118
Query: 62 EDTFILEIDRSKRDSLIDKLLFY--------KLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
D L ++ + +D+ L + L +I +Q +
Sbjct: 119 -DRLFLVVNAACKDADEAHLRAHLADACDITALTDRALIALQGPKAEAALAKICADVTTM 177
Query: 114 SFID 117
F+D
Sbjct: 178 KFMD 181
>gi|330505362|ref|YP_004382231.1| sarcosine oxidase subunit alpha family protein [Pseudomonas
mendocina NK-01]
gi|328919648|gb|AEB60479.1| sarcosine oxidase alpha subunit family protein [Pseudomonas
mendocina NK-01]
Length = 1005
Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 731 MTTTTGGAGRVMEWLEIY 748
>gi|331652072|ref|ZP_08353091.1| putative aminomethyltransferase [Escherichia coli M718]
gi|331050350|gb|EGI22408.1| putative aminomethyltransferase [Escherichia coli M718]
Length = 386
Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISATELIAS 119
>gi|293414320|ref|ZP_06656969.1| aminomethyltransferase [Escherichia coli B185]
gi|291434378|gb|EFF07351.1| aminomethyltransferase [Escherichia coli B185]
Length = 386
Score = 39.4 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ S + V G A + +++ADV + + A S +L +G I + + ++
Sbjct: 47 SHLSIVSVMGDDAWALINQLVSADVSIIRDEQAIYSLVLNEEGTIRGDVYVLCSIDGYYL 106
Query: 67 LEIDRSKRDSLID 79
L D S + +
Sbjct: 107 LSEDISATELIAS 119
>gi|91976211|ref|YP_568870.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisB5]
gi|91682667|gb|ABE38969.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisB5]
Length = 382
Score = 39.4 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G A L+ ++ D+ LP R + G IL +++ +
Sbjct: 59 SHMGQIELRAKSGKLDDAARALERLVPQDIAALPPGRQRYAQFTNESGGILDDLMVTNLG 118
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
D L ++ + + L + L I P ++ + + F
Sbjct: 119 -DRLFLVVNAACKAEDEAHLRAH-LSETCEITALPERALLALQGPKAEAALGHF 170
>gi|124266626|ref|YP_001020630.1| aminomethyltransferase [Methylibium petroleiphilum PM1]
gi|124259401|gb|ABM94395.1| aminomethyltransferase [Methylibium petroleiphilum PM1]
Length = 381
Score = 39.4 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 43/244 (17%)
Query: 30 DVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYK---- 85
DVL L R + G +L ++++ E D +L ++ + +D+ + L +
Sbjct: 87 DVLGLGVGKQRYAFFTNAGGGLLDDLMVTRREND-LLLIVNAACKDTDLHHLQAHIGHRC 145
Query: 86 ----LRSNVIIEIQPINGVVLSWNQEHTFSNSSF-------------------------- 115
L ++ +Q V S +F
Sbjct: 146 TVQPLPERALLALQGPKAVTALARLNPGVSALTFMTGGAFTLVGSDCYLTRSGYTGEDGF 205
Query: 116 -IDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
I + A+ L E + + LR+ G+ D +T P +A +
Sbjct: 206 EISVPATHAEALARELLAQPEVAPAGLGARDTLRLEAGLCLYGHDIHTATT-PIEAGLSW 264
Query: 175 -----LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIG 228
G Y G V+ + +R +I G+ ++ + IG
Sbjct: 265 AIQKVRRAGGARAGGYPGATVIDAQLAGGVSERRVGLIGLERVPVREGTELVDSQGHRIG 324
Query: 229 TLGV 232
+
Sbjct: 325 RVTS 328
>gi|167042021|gb|ABZ06757.1| putative glycine cleavage T-protein (aminomethyl transferase)
[uncultured marine microorganism HF4000_141F21]
Length = 810
Score = 39.4 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQGKILLYFLISKIEEDTFIL 67
++ G +A FL ++ LP KI R L +G + F I K E++F L
Sbjct: 494 RIKGPNAEEFLNKLVAN---KLPKKIGRINLCHALNTKGGVHSEFTIMKESENSFYL 547
>gi|254461083|ref|ZP_05074499.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2083]
gi|206677672|gb|EDZ42159.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacteraceae bacterium HTCC2083]
Length = 811
Score = 39.4 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+R+ G + D L P + +D + KG +IGQ+ + + + R
Sbjct: 671 DSMRMEKGFLHWKADLLTE-FDPFETALDRF--VWPEKGAFIGQKALKKRMAKGPTRSLV 727
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVV-----VG-KKALAIARIDKVDHAIKKGMAL 257
+ + T G+ ++ D +GT+ VG A A + + K + L
Sbjct: 728 TLKVDSTRTPAHGGASLMQGDTVVGTITSGDWGYRVGMNLAYAFVMPELAEAGCKMQLDL 787
Query: 258 TVHGVRVKASFPH 270
V + P
Sbjct: 788 CGELVAAEVIAPS 800
>gi|220911657|ref|YP_002486966.1| glycine cleavage system aminomethyltransferase T [Arthrobacter
chlorophenolicus A6]
gi|219858535|gb|ACL38877.1| glycine cleavage system T protein [Arthrobacter chlorophenolicus
A6]
Length = 382
Score = 39.4 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 31/152 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59
LS+ + V G +A FL D + +P A+ S I G I+ + +
Sbjct: 50 LSHMGEVWVTGPAAAAFL------DYALVGRISAMPVGKAKYSLICDTDGGIIDDLITYR 103
Query: 60 I-----EEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
D F++ + + V+ E E + +S
Sbjct: 104 RPSPAEGGDRFLVVPNAGN--------------AKVVAEALQERAAGFDVAVEDASAETS 149
Query: 115 FIDERFSIADVLLHRTWGHNEKIASDIKTYHE 146
I + A LL R N+ Y+
Sbjct: 150 LIAVQGPKAQDLLLRLVPANQHPDVAGLKYYA 181
>gi|260462814|ref|ZP_05811019.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
gi|259031458|gb|EEW32729.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
Length = 957
Score = 39.4 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ + + TL R +L+ G + ++ +++E F+
Sbjct: 626 STLGKIEVIGPQAAAFVDFLYYNTMSTLKPGRCRYGFMLSENGVVFDDGVLVRLDEHRFV 685
Query: 67 LEIDRSKRDSLIDKL 81
+ S ++ +L
Sbjct: 686 ISCSSSHVAAVHARL 700
>gi|324503085|gb|ADY41346.1| Dimethylglycine dehydrogenase [Ascaris suum]
Length = 540
Score = 39.4 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V L+ + I+V G +I L ++T V L S +LT +G IL F I +
Sbjct: 421 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 478
Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103
+ FIL D + + L V I I L+
Sbjct: 479 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLA 524
>gi|146309143|ref|YP_001189608.1| sarcosine oxidase alpha subunit family protein [Pseudomonas
mendocina ymp]
gi|145577344|gb|ABP86876.1| sarcosine oxidase, alpha subunit family [Pseudomonas mendocina ymp]
Length = 1005
Score = 39.4 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L AR + G + + + + ++ F+
Sbjct: 671 STLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFV 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 731 MTTTTGGAGRVMEWLEIY 748
>gi|324503711|gb|ADY41607.1| Dimethylglycine dehydrogenase [Ascaris suum]
Length = 540
Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
+ V L+ + I+V G +I L ++T V L S +LT +G IL F I +
Sbjct: 421 AIVDLTWRGKIEVRGPDSIILLDQVMTNTVPGL--GSITSSLMLTRRGNILAPFTIFHHD 478
Query: 62 --EDTFILEIDRSKRDSLIDKLLFYKLRSN--VIIEIQPINGVVLS 103
+ FIL D + + L V I I L+
Sbjct: 479 QYKTNFILLTDPERESRDLYWLQKEAAERKLNVQITIVSEYLASLA 524
>gi|167584134|ref|ZP_02376522.1| sarcosine oxidase, alpha subunit family protein [Burkholderia
ubonensis Bu]
Length = 1003
Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 84/274 (30%), Gaps = 56/274 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWMYTNPWGKLEVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR-SNVIIEIQPINGVVLSWN--------QEHT 109
+ ++ L K+R ++V + VV + Q+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVT-DHWATFAVVGPKSRKVVQKVCQDID 784
Query: 110 FSNSSF------------IDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
F N +F + R + N + +
Sbjct: 785 FGNEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR G + D ++ P+D M G+ ++G+ +SR
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSVTPYDLGM---GGLVAKSKDFLGKRSLSRSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEIGT 229
RK+ + + D+ + P G+ I+ D ++ T
Sbjct: 901 KEGRKQFVGLLTDDEQFVLPEGAQIVAKDTQVST 934
>gi|118588265|ref|ZP_01545674.1| sarcosine dehydrogenase [Stappia aggregata IAM 12614]
gi|118438971|gb|EAV45603.1| sarcosine dehydrogenase [Stappia aggregata IAM 12614]
Length = 827
Score = 39.0 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 52/266 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
++ G A FL ++T + + + +L GK++ F I++ + TF + S
Sbjct: 511 EITGPGAESFLSLLMTNTMPKV--GRIVLTPMLNENGKLIGDFTIARASDQTFYMW-GSS 567
Query: 73 KRDS-----LIDKLLFYK---LRS----------------NV--IIEIQPINGVVLSWNQ 106
+ + L +R+ V I ++G +
Sbjct: 568 QAEIYHMRWFEKHLPEDGSVTIRAINLGWVGLSIAGPNSRKVLEKITGDDVSGEAFRFMD 627
Query: 107 --EHTFSNSSFIDERFSIADVLLHRTWGHNE-------KIASDIKTYHE----------L 147
E +N+ R + L + W E + + ++ L
Sbjct: 628 FREMDVANAPCKVNRITYTGDLGYEIWMAPEYQRQVYDALMTAGAEFNIVNFGMRALLCL 687
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MI 206
R+ +F P P +A + + L+K +IG++ + R R +
Sbjct: 688 RLEKNFGTWFREFRP-IYGPFEADLGRF--VKLSKDAFIGKDAAQKEFDEGPKRLRVSFV 744
Query: 207 ITGTDDLPPSGSPILTDDIEIGTLGV 232
+ +D P+ D IG +
Sbjct: 745 VDASDADVMGDEPVWHDGKVIGWVTS 770
>gi|46202678|ref|ZP_00052785.2| COG0404: Glycine cleavage system T protein (aminomethyltransferase)
[Magnetospirillum magnetotacticum MS-1]
Length = 458
Score = 39.0 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G +L I+++ E +++
Sbjct: 224 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGFVLDDGTIARLAETHYVMTAST 283
Query: 72 SKRDSLIDKLLF 83
+ ++ L F
Sbjct: 284 ANAAKVMQHLEF 295
>gi|114326744|ref|YP_743901.1| sarcosine oxidase alpha subunit [Granulibacter bethesdensis
CGDNIH1]
gi|114314918|gb|ABI60978.1| sarcosine oxidase alpha subunit [Granulibacter bethesdensis
CGDNIH1]
Length = 995
Score = 39.0 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 85/265 (32%), Gaps = 51/265 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL + L R +L G I +I +I +D F
Sbjct: 664 STLGKIEVVGPDAAEFLNRLYVNAWDKLKPGKCRYGLLLREDGFITDDGVIGRIAQDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQ-----PINGVVLSWNQE 107
+ S ++ + Y+ L S +I +Q I ++
Sbjct: 724 VTTTTSGAPRVLAMMEDYRQTEWPELNVWLTSTTEQWAVIAVQGPKARDIIAPLIEGVDL 783
Query: 108 HTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASD---------------------- 140
+ F++ S D + L R G+ + +D
Sbjct: 784 NDFAHMSVADATIAGVPGRLFRVSFTGELGYELNVPADYGRAIWEAVYERGQDFGIVPYG 843
Query: 141 IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+T H LR G V + T P D + I K ++G+ + R ++
Sbjct: 844 TETMHVLRAEKGYVIVGQE-TDGTATPDDVGLAW--AIGKAKKDFVGKRSLERTSMKDPN 900
Query: 201 RKRPMIITGTDDL--PPSGSPILTD 223
RK+ + + D G+ I+ D
Sbjct: 901 RKQLVGLLTDDPAIVLEEGAQIVAD 925
>gi|302188791|ref|ZP_07265464.1| aminomethyltransferase [Pseudomonas syringae pv. syringae 642]
Length = 968
Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 102/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
F V L G ++ + H LR+ +V+ F
Sbjct: 760 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKAFDMR 819
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ +
Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 940 PIRVE-DGVVVQATV 953
>gi|183984391|ref|YP_001852682.1| aminomethyltransferase GcvT_2 [Mycobacterium marinum M]
gi|183177717|gb|ACC42827.1| aminomethyltransferase GcvT_2 [Mycobacterium marinum M]
Length = 814
Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+V G A+ LQ + T D+ + +L G I ++++ F
Sbjct: 507 EVSGAGAVDLLQRLTTNDIDK-GVGSVTYTLMLDETGGIRSDLTVARLGTARF 558
>gi|326794962|ref|YP_004312782.1| sarcosine oxidase subunit alpha family [Marinomonas mediterranea
MMB-1]
gi|326545726|gb|ADZ90946.1| sarcosine oxidase, alpha subunit family [Marinomonas mediterranea
MMB-1]
Length = 1005
Score = 39.0 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + GK A FL + T L R + G + + S + E+ F+
Sbjct: 671 STLGKIDIQGKDAREFLGRVYTNAWAKLAVGKCRYGLMCGEDGMVFDDGVTSCLGENHFL 730
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ L Y
Sbjct: 731 MTTTSGGAAHVLEWLELY 748
>gi|320354821|ref|YP_004196160.1| glycine cleavage T protein (aminomethyl transferase) [Desulfobulbus
propionicus DSM 2032]
gi|320123323|gb|ADW18869.1| glycine cleavage T protein (aminomethyl transferase) [Desulfobulbus
propionicus DSM 2032]
Length = 429
Score = 39.0 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLT--------LPYKIARGSAILTPQGKILLYFLIS 58
S+ + + + G + LQ + D+ L L G ++ ++
Sbjct: 54 SHMAVLTLHGPAVRELLQRCFSKDLEQCIGPGKGPLVPGRCVYGVFLDDNGWVIDDAIVY 113
Query: 59 KIEEDTFILEIDRSKRDSLIDKL 81
+ E ++L ++ + + L
Sbjct: 114 QCGETDYMLVVNAAMGGPVSAHL 136
>gi|154244817|ref|YP_001415775.1| sarcosine oxidase alpha subunit family protein [Xanthobacter
autotrophicus Py2]
gi|154158902|gb|ABS66118.1| sarcosine oxidase, alpha subunit family [Xanthobacter autotrophicus
Py2]
Length = 1003
Score = 39.0 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I L L R +L G I +++++ D F
Sbjct: 661 STLGKIEVKGPDAAEFLNRIYPNAWLKLEPGKCRYGLMLKEDGFIFDDGVVARLAPDLFH 720
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 721 VTTTTGGAPRVLAHMEDY 738
>gi|254451414|ref|ZP_05064851.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238]
gi|198265820|gb|EDY90090.1| sarcosine oxidase, alpha subunit [Octadecabacter antarcticus 238]
Length = 973
Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 28/78 (35%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + TL R +L G ++ +++ +
Sbjct: 638 CDVSTLGKIDIAGPDAAAFLDFVYCNTFSTLKENRVRYGLMLREDGHVMDDGTTARLGAN 697
Query: 64 TFILEIDRSKRDSLIDKL 81
+++ + ++ L
Sbjct: 698 HYVMTTTTAAAGQVMKHL 715
>gi|329896457|ref|ZP_08271535.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC3088]
gi|328921775|gb|EGG29147.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC3088]
Length = 369
Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 90/292 (30%), Gaps = 47/292 (16%)
Query: 23 LQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82
L+A++ AD+ L S + G ++ ++++ D F+L I+ +D ++ L
Sbjct: 68 LEALMPADLEGLAVNAQTYSLLTNEAGGVIDDLIVTRWAADQFMLVINAGCKDKDLEHLR 127
Query: 83 FY--------------------KLRS---NVIIEIQPINGVVLSWNQEH----------- 108
+ K R+ +++ E Q + + +W Q
Sbjct: 128 SHLASVNLEVLSQHSLLALQGPKARAVMNDLLPETQNLVFMTGTWAQFEGEQVYVTCSGY 187
Query: 109 TFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
T + I S + L + H + + + LR+ G+ + I P
Sbjct: 188 TGEDGFEISVPNSHVEALAQKLLAHADVLPIGLGARDSLRLEAGLCLYGHELE-EDISPI 246
Query: 169 DALMDL-----LNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIITGTDDLPPSGSPILT 222
A + G Y+G ++ R + + G +
Sbjct: 247 QAGLKWAIAKARRHEGARAGGYLGSAIIEAQWAEGTDTVRVGLKVLGKRPVREGAVVFDA 306
Query: 223 DDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
++GT+ A+A D+ + V V+ +
Sbjct: 307 QQQQVGTVCSGGFGATLEQPVAMAYVNADQAALGTHLFADVRGKLVEVEVAK 358
>gi|126738770|ref|ZP_01754466.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
SK209-2-6]
gi|126719951|gb|EBA16658.1| sarcosine oxidase, alpha subunit family protein [Roseobacter sp.
SK209-2-6]
Length = 981
Score = 39.0 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + T L R +L G I+ +++ E
Sbjct: 646 CDVSTLGKIDIQGADAGKFLDFVYTNGFSKLKVGKTRYGLMLREDGFIMDDGTTARLGEH 705
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+++ + ++ L F
Sbjct: 706 HYVMTTTTAAAGQVMAHLEF 725
>gi|326676315|ref|XP_002665475.2| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like [Danio rerio]
Length = 885
Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
G A+ LQ + D+ +P + +L +G + ++ +++F + +
Sbjct: 544 SGDQALHLLQRLCANDLD-VPVGHIVHTGMLNARGGYENDCSVVRLSKNSFFIISPTDQ 601
>gi|213971226|ref|ZP_03399343.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
T1]
gi|301383925|ref|ZP_07232343.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
Max13]
gi|302061522|ref|ZP_07253063.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
K40]
gi|302131036|ref|ZP_07257026.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923979|gb|EEB57557.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
T1]
Length = 968
Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + + G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759
Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
+ I R + + + +K +
Sbjct: 760 LSAEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVAARHALKLWDALSEAGKAFDMR 819
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G V + D P + M +S TK ++G+ V ++
Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRAVDILEAL 876
Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250
RK + LP G +L G + + +A A D+
Sbjct: 877 PQKRKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCENSQTLDMIIGMAYAAFDQSTPG 936
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + GV V+A+
Sbjct: 937 QQIPIRVE-DGVVVQATV 953
>gi|239916847|ref|YP_002956405.1| aminomethyltransferase [Micrococcus luteus NCTC 2665]
gi|281414692|ref|ZP_06246434.1| aminomethyltransferase [Micrococcus luteus NCTC 2665]
gi|239838054|gb|ACS29851.1| aminomethyltransferase [Micrococcus luteus NCTC 2665]
Length = 388
Score = 39.0 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ ++V G A L A+ + + TL A+ + LT G IL ++ ++++
Sbjct: 52 LSHMGEVRVTGPEAGAMLDHALSSV-LSTLKPGRAKYALCLTDAGTILDDTIVYRMDDGE 110
Query: 65 ------FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
+++ + ++ L + VV E S ++ +
Sbjct: 111 AGSEPDYLVVPNAGNIAAVHTALNQ---------RASGWDAVV-----EDESSTTALVAV 156
Query: 119 RFSIADVLLHRTWGHNEKIASDIKTY 144
+ A+ +L R +++K Y
Sbjct: 157 QGPQAERILARAMPEAAAQLAELKYY 182
>gi|321254109|ref|XP_003192968.1| aminomethyltransferase, mitochondrial precursor [Cryptococcus
gattii WM276]
gi|317459437|gb|ADV21181.1| aminomethyltransferase, mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 410
Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 30/68 (44%)
Query: 15 CGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKR 74
G +A FL + + + +L + S +L QG I+ +I+K + +F + + +
Sbjct: 88 TGPTAQEFLLTLCPSSLDSLTPFTSTLSVLLNEQGGIIDDTIITKHSDTSFYVVTNAGRA 147
Query: 75 DSLIDKLL 82
D +
Sbjct: 148 DEDKAHIT 155
>gi|167577637|ref|ZP_02370511.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis TXDOH]
Length = 1002
Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|91787747|ref|YP_548699.1| glycine cleavage system T protein [Polaromonas sp. JS666]
gi|91696972|gb|ABE43801.1| glycine cleavage system T protein [Polaromonas sp. JS666]
Length = 398
Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI------ 60
S+ +++ G + L+ ++ DV+ LP R +L G I+ +
Sbjct: 71 SHMGQLRLVGPDSAAALETLLPVDVIDLPAGKQRYGLLLNDDGGIIDDLMFFNRNMHDSA 130
Query: 61 -EEDTFIL 67
D F++
Sbjct: 131 NGGDLFLI 138
>gi|167840012|ref|ZP_02466696.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis
MSMB43]
Length = 520
Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E F+
Sbjct: 183 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 242
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 243 MTTTTGGAARVLTWLER 259
>gi|83717636|ref|YP_439195.1| sarcosine oxidase subunit alpha [Burkholderia thailandensis E264]
gi|167615778|ref|ZP_02384413.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis Bt4]
gi|257142316|ref|ZP_05590578.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis E264]
gi|83651461|gb|ABC35525.1| sarcosine oxidase, alpha subunit [Burkholderia thailandensis E264]
Length = 1002
Score = 39.0 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ E F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|158425869|ref|YP_001527161.1| glycine cleavage system T protein [Azorhizobium caulinodans ORS
571]
gi|158332758|dbj|BAF90243.1| glycine cleavage system T protein [Azorhizobium caulinodans ORS
571]
Length = 387
Score = 39.0 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 42/245 (17%)
Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISK----IEEDTFILEIDRSKRDSLIDKLLFY 84
AD+L L R S +L G IL ++++ ++ T +L ++ + + +
Sbjct: 84 ADILNLKPGQQRYSQLLAEDGGILDDLMVARPADPAQDGTLLLVVNAACKTDDYAHIAA- 142
Query: 85 KLRSNVIIEIQPINGVVLSWNQEH-----------------------------TFSNSSF 115
+L + V + ++ + S S +
Sbjct: 143 RLPAGVTLVTHEDRALLALQGPKAVEVMARHAPGAADMAFMTVLVTTYDGLPIAISRSGY 202
Query: 116 IDERF-------SIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
E + A+ L + + + LR+ G+ D +T
Sbjct: 203 TGEDGYEISVANADAETLWTKLLAEPDVKPIGLGARDSLRLEAGLCLYGHDIDTTTSPVE 262
Query: 169 DALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPI-LTDDIEI 227
AL+ + G + G E + R R R + G+ I D +
Sbjct: 263 GALVWSIQKRRREDGGFPGAERIQRELKDGPARLRVGLAFEGRAPAREGAEIATKDGTIV 322
Query: 228 GTLGV 232
G +
Sbjct: 323 GRVTS 327
>gi|313668940|ref|YP_004049224.1| aminomethyltransferase [Neisseria lactamica ST-640]
gi|313006402|emb|CBN87865.1| putative aminomethyltransferase [Neisseria lactamica 020-06]
Length = 366
Score = 39.0 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGVNAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|194099194|ref|YP_002002284.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae NCCP11945]
gi|240017108|ref|ZP_04723648.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae FA6140]
gi|240116189|ref|ZP_04730251.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae PID18]
gi|254494202|ref|ZP_05107373.1| glycine cleavage system T protein [Neisseria gonorrhoeae 1291]
gi|268601852|ref|ZP_06136019.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID18]
gi|193934484|gb|ACF30308.1| aminomethyltransferase [Neisseria gonorrhoeae NCCP11945]
gi|226513242|gb|EEH62587.1| glycine cleavage system T protein [Neisseria gonorrhoeae 1291]
gi|268585983|gb|EEZ50659.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID18]
Length = 366
Score = 39.0 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|59801751|ref|YP_208463.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae FA 1090]
gi|239999484|ref|ZP_04719408.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae 35/02]
gi|240014661|ref|ZP_04721574.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae DGI18]
gi|240081253|ref|ZP_04725796.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae FA19]
gi|240113464|ref|ZP_04727954.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae MS11]
gi|240118473|ref|ZP_04732535.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae PID1]
gi|240121183|ref|ZP_04734145.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae PID24-1]
gi|240124016|ref|ZP_04736972.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae PID332]
gi|240126362|ref|ZP_04739248.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae SK-92-679]
gi|240128681|ref|ZP_04741342.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae SK-93-1035]
gi|260439998|ref|ZP_05793814.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae DGI2]
gi|268595296|ref|ZP_06129463.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae 35/02]
gi|268597363|ref|ZP_06131530.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae FA19]
gi|268599538|ref|ZP_06133705.1| glycine cleavage system T protein [Neisseria gonorrhoeae MS11]
gi|268604183|ref|ZP_06138350.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID1]
gi|268682641|ref|ZP_06149503.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID332]
gi|268684947|ref|ZP_06151809.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-92-679]
gi|268687068|ref|ZP_06153930.1| glycine cleavage system T protein [Neisseria gonorrhoeae
SK-93-1035]
gi|291043288|ref|ZP_06569011.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae DGI2]
gi|293398606|ref|ZP_06642784.1| glycine cleavage system T protein [Neisseria gonorrhoeae F62]
gi|59718646|gb|AAW90051.1| putative aminomethyltransferase [Neisseria gonorrhoeae FA 1090]
gi|268548685|gb|EEZ44103.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae 35/02]
gi|268551151|gb|EEZ46170.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae FA19]
gi|268583669|gb|EEZ48345.1| glycine cleavage system T protein [Neisseria gonorrhoeae MS11]
gi|268588314|gb|EEZ52990.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID1]
gi|268622925|gb|EEZ55325.1| glycine cleavage system T protein [Neisseria gonorrhoeae PID332]
gi|268625231|gb|EEZ57631.1| glycine cleavage system T protein [Neisseria gonorrhoeae SK-92-679]
gi|268627352|gb|EEZ59752.1| glycine cleavage system T protein [Neisseria gonorrhoeae
SK-93-1035]
gi|291012894|gb|EFE04877.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae DGI2]
gi|291611077|gb|EFF40174.1| glycine cleavage system T protein [Neisseria gonorrhoeae F62]
gi|317164732|gb|ADV08273.1| glycine cleavage system aminomethyltransferase T [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 366
Score = 39.0 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|330942967|gb|EGH45444.1| aminomethyltransferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 635
Score = 39.0 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 475 IDVSTLGGLDVRGPDAAELLNRLYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 534
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 535 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 583
>gi|218885445|ref|YP_002434766.1| glycine cleavage system protein T [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756399|gb|ACL07298.1| glycine cleavage system T protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 362
Score = 39.0 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+ G A L ++ ++ TL R +L G IL ++ + ED ++L ++ +
Sbjct: 59 TLRGPGARDALSRAVSHNLETLKPGRCRYGFLLNEAGGILDDLIVYCVAEDDYMLVVNGA 118
Query: 73 KRDSLIDKLL 82
+S L
Sbjct: 119 CTESDFAALR 128
>gi|215259949|gb|ACJ64459.1| mitochondrial aminomethyltransferase [Culex tarsalis]
Length = 291
Score = 39.0 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
GK I +++ TADV L + +G IL +++++ +DT + + S+++
Sbjct: 1 GKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVADDTLYVVSNASRKE 60
Query: 76 S 76
+
Sbjct: 61 T 61
>gi|319784832|ref|YP_004144308.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317170720|gb|ADV14258.1| sarcosine oxidase, alpha subunit family protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 993
Score = 38.6 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + L AR +L G + S++ ED
Sbjct: 655 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 714
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+ L +K ++ L F
Sbjct: 715 HYFLTTTTAKAGLVMQHLEF 734
>gi|222080880|ref|YP_002540243.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
gi|221725559|gb|ACM28648.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
Length = 813
Score = 38.6 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 86/267 (32%), Gaps = 53/267 (19%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILE-IDR 71
++ G A +L I+ + + S LT G + +++S++E+ F L R
Sbjct: 498 EISGPGAEAWLDGILANRLPKV--GRVNLSHHLTRNGGVQAEYIVSRLEDGMFYLISTPR 555
Query: 72 SKR---DSLIDKLLFY---KLR----------------SNVI--IEIQPINGVVLSWNQE 107
++R D L L +LR V+ + I+ W
Sbjct: 556 AERWNFDDLSKLLPKDGTVQLRNATNERGCFTIVGPKAREVLQGLTEMDISNEAFPWFGV 615
Query: 108 HTFSNSSFIDERFSIADVLLHRTWGHNEKIA--------------------SDIKTYHEL 147
+ + D R + W + ++ L
Sbjct: 616 KSGTVGLATDVRLLRVNYEGELGWELYHPLCYQRHLLEALLAAGAPHGLRLIGLQALESL 675
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII 207
R+ D P ++ +D I L KG +IG+E + R + + +++R + I
Sbjct: 676 RLEKSYRAMYRDMNPELTAW-ESGLDRF--IRLDKGEFIGREALLRQKEQG-VKQRSVTI 731
Query: 208 TGTDDLPPS--GSPILTDDIEIGTLGV 232
+ D S + + +G +
Sbjct: 732 SIDTDGASSLIHEGVYRNGKLVGRITS 758
>gi|110677986|ref|YP_680993.1| dimethylglycine dehydrogenase, putative [Roseobacter denitrificans
OCh 114]
gi|109454102|gb|ABG30307.1| dimethylglycine dehydrogenase, putative [Roseobacter denitrificans
OCh 114]
Length = 811
Score = 38.6 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP 204
+R+ G + + L P + +D + K +IGQ+ + + IRK
Sbjct: 671 DSMRMEKGFLHWKAELLTE-FDPFETGLDRF--VKPEKRPFIGQQALQKRMANGPIRKLV 727
Query: 205 -MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
+ I T G+ ++ D +GT+ + +
Sbjct: 728 TLKIDCTTAPAHGGASLMQDGAVVGTITSGAWGYRVGL 765
>gi|82408428|gb|ABB73054.1| dimethylglycine oxidase [Arthrobacter globiformis]
Length = 835
Score = 38.6 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 93/312 (29%), Gaps = 63/312 (20%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65
+ V G A L + T ++ +L G I ++++ E+ F
Sbjct: 517 LAVNGPGAQELLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEDFQLGVNS 575
Query: 66 -----ILEIDRSKRDSL--IDK------------------LLFYKLRSNVIIEIQPINGV 100
L ++ K+ + L + V + +G+
Sbjct: 576 NVDFDYLRVEARKQSAADPAKWVHVTDITGSTCCIGLWGPLAREVI-GKVSSDDLTNDGL 634
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143
+E + R S L + E IA+
Sbjct: 635 KYFRTKEISVGGIPVTAMRLSYVGELGWELYTTAEYGLKLWDLLFEAGREHGIIAAGRGA 694
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQE-VVSRIQHRNIIRK 202
++ LR+ G TD P+ + + ++ K ++G E + +R +
Sbjct: 695 FNSLRLEKGYRLWGTDMTTEH-HPYQSGLGFS--VAKDKVGFVGAEALAARKEQPAEKVL 751
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKA----LAIARIDKVDHAIKKGMALT 258
R + + + P+ + G + + +A A + A+ +G A+
Sbjct: 752 RCLTVDDGTSIVLGKEPVYVGGVAAGYVTSAAYGYSIRKPIAYAWL---PAAVSEGDAVE 808
Query: 259 VH--GVRVKASF 268
+ G RV A+
Sbjct: 809 IEYFGRRVAATV 820
>gi|260469714|ref|ZP_05813874.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
gi|259028497|gb|EEW29813.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
Length = 992
Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + L AR +L G + S++ ED
Sbjct: 654 CDVSTLGKIDVHGPDAGAFLDRVYINTFSNLAVGKARYGLMLREDGIVYDDGTTSRLAED 713
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+ L +K ++ L F
Sbjct: 714 HYFLTTTTAKAGLVMQHLEF 733
>gi|254246733|ref|ZP_04940054.1| Glycine cleavage system T protein [Burkholderia cenocepacia PC184]
gi|124871509|gb|EAY63225.1| Glycine cleavage system T protein [Burkholderia cenocepacia PC184]
Length = 372
Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|254480770|ref|ZP_05094017.1| sarcosine oxidase, alpha subunit family [marine gamma
proteobacterium HTCC2148]
gi|214039353|gb|EEB80013.1| sarcosine oxidase, alpha subunit family [marine gamma
proteobacterium HTCC2148]
Length = 1004
Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 83/268 (30%), Gaps = 54/268 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L L R +L G + + + + E+ ++
Sbjct: 669 STLGKIDIQGSDAAEFLNRVYTNGYLKLAAGKCRYGLMLKEDGMVFDDGVTACLAENHYL 728
Query: 67 LEIDRSKRDSLIDKLLFY------------------------------KLRSNV--IIEI 94
+ ++ L + K+ V I++
Sbjct: 729 MFTTTGGAAGVLSWLELWHQTEWPELNVFFTSATDHWATATITGPNARKVLEKVCDDIDL 788
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHRTWGHNEKI 137
+ W + T ++ + R S L L+ +
Sbjct: 789 SADAFKFMDWR-DGTVADVAARVFRISFTGELTFEVNVPAHHGRHVWEKLYEAGQEFDIT 847
Query: 138 ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
+T H LR G + D ++ P D M + G + +IG ++R +
Sbjct: 848 PYGTETMHVLRAEKGFIIVGQD-TDGSMTPQDLNMGWVVGKN-KDFSFIGHRGLNREDCQ 905
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTD 223
RK+ + + D + P G+ I+ D
Sbjct: 906 REDRKQLVGLKTLDPKTVLPEGAQIVVD 933
>gi|188580833|ref|YP_001924278.1| sarcosine oxidase subunit alpha [Methylobacterium populi BJ001]
gi|179344331|gb|ACB79743.1| sarcosine oxidase, alpha subunit family [Methylobacterium populi
BJ001]
Length = 1009
Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 81/250 (32%), Gaps = 67/250 (26%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I + G+ A+ F++ + TLP AR + +L G IL I+++ E +++
Sbjct: 679 IDIQGRDALAFIERVCANPFATLPVGKARYAVLLREDGLILDDGTIARMGETHYVMTAST 738
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
+ ++ L F + +++Q + V W Q A L R
Sbjct: 739 ANAAKVMQHLEFCRQWLWPELDVQ-LASVSEQWAQYAVAG---------PRARDTLRR-- 786
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
IVDP D + FP A D+ G
Sbjct: 787 ---------------------IVDPGFDI-SNDAFPFLACADVTVG-------------- 810
Query: 192 SRIQHRNIIRKRPMIITGTDDL-------PPSGS----PILTDDIEIGTLGVVVGKKALA 240
I R I+ + +L G I+ + G G +AL+
Sbjct: 811 ------GGIPARLFRISFSGELAYELAVPAAYGDAAWRAIMQAGLPYG--ITAYGSEALS 862
Query: 241 IARIDKVDHA 250
+ RI+K A
Sbjct: 863 VMRIEKGHAA 872
>gi|260575160|ref|ZP_05843161.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2]
gi|259022782|gb|EEW26077.1| sarcosine oxidase, alpha subunit family [Rhodobacter sp. SW2]
Length = 1003
Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A FL + T + TLP R + G + ++++I +DT++
Sbjct: 670 STLGKIIVKGPDAGRFLDMLYTGVMSTLPVGKCRYGLMCNENGFLSDDGVVARISDDTWL 729
Query: 67 LEIDRSKRDSL 77
D +
Sbjct: 730 CHTTSGGADRI 740
>gi|167723968|ref|ZP_02407204.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei DM98]
Length = 531
Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 194 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 253
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 254 MTTTTGGAARVLTWLER 270
>gi|167573131|ref|ZP_02366005.1| sarcosine oxidase, alpha subunit [Burkholderia oklahomensis C6786]
Length = 1002
Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|167566053|ref|ZP_02358969.1| sarcosine oxidase, alpha subunit [Burkholderia oklahomensis EO147]
Length = 1002
Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|229220685|ref|YP_622778.2| glycine cleavage system aminomethyltransferase T [Burkholderia
cenocepacia AU 1054]
gi|229220798|ref|YP_833793.2| glycine cleavage system aminomethyltransferase T [Burkholderia
cenocepacia HI2424]
Length = 372
Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|126444992|ref|YP_001062947.1| sarcosine oxidase subunit alpha, heterotetrameric [Burkholderia
pseudomallei 668]
gi|126224483|gb|ABN87988.1| sarcosine oxidase, alpha subunit, heterotetrameric [Burkholderia
pseudomallei 668]
Length = 1002
Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|237507609|ref|ZP_04520324.1| sarcosine oxidase, subunit alpha [Burkholderia pseudomallei
MSHR346]
gi|234999814|gb|EEP49238.1| sarcosine oxidase, subunit alpha [Burkholderia pseudomallei
MSHR346]
Length = 1002
Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|126455912|ref|YP_001075894.1| sarcosine oxidase subunit alpha [Burkholderia pseudomallei 1106a]
gi|134282520|ref|ZP_01769224.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 305]
gi|167820114|ref|ZP_02451794.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 91]
gi|167849944|ref|ZP_02475452.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei B7210]
gi|167906899|ref|ZP_02494104.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei NCTC
13177]
gi|167915256|ref|ZP_02502347.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 112]
gi|167923087|ref|ZP_02510178.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei BCC215]
gi|242313017|ref|ZP_04812034.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106b]
gi|254186673|ref|ZP_04893189.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pasteur
52237]
gi|254193887|ref|ZP_04900319.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei S13]
gi|254301642|ref|ZP_04969086.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 406e]
gi|254356626|ref|ZP_04972901.1| sarcosine oxidase, alpha subunit [Burkholderia mallei 2002721280]
gi|126229680|gb|ABN93093.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106a]
gi|134246077|gb|EBA46167.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 305]
gi|148025653|gb|EDK83776.1| sarcosine oxidase, alpha subunit [Burkholderia mallei 2002721280]
gi|157810902|gb|EDO88072.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 406e]
gi|157934357|gb|EDO90027.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei Pasteur
52237]
gi|169650638|gb|EDS83331.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei S13]
gi|242136256|gb|EES22659.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1106b]
Length = 1002
Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|53722393|ref|YP_111378.1| sarcosine oxidase alpha subunit [Burkholderia pseudomallei K96243]
gi|76818599|ref|YP_335552.1| putative sarcosine oxidase subunit alpha [Burkholderia pseudomallei
1710b]
gi|167742939|ref|ZP_02415713.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei
14]
gi|226199029|ref|ZP_03794591.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei
Pakistan 9]
gi|254183760|ref|ZP_04890352.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1655]
gi|254263647|ref|ZP_04954512.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1710a]
gi|52212807|emb|CAH38839.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei
K96243]
gi|76583072|gb|ABA52546.1| putative sarcosine oxidase alpha subunit [Burkholderia pseudomallei
1710b]
gi|184214293|gb|EDU11336.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1655]
gi|225928804|gb|EEH24829.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei
Pakistan 9]
gi|254214649|gb|EET04034.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 1710a]
Length = 1002
Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|170731514|ref|YP_001763461.1| glycine cleavage system aminomethyltransferase T [Burkholderia
cenocepacia MC0-3]
gi|238688541|sp|B1JSZ4|GCST_BURCC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169814756|gb|ACA89339.1| glycine cleavage system T protein [Burkholderia cenocepacia MC0-3]
Length = 372
Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I V L A S +L PQG ++ ++ E+ F
Sbjct: 52 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 111
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 112 RVVVNAGTAE 121
>gi|217425307|ref|ZP_03456801.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 576]
gi|217391558|gb|EEC31586.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 576]
Length = 1002
Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|167898550|ref|ZP_02485951.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 7894]
Length = 1002
Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 665 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 725 MTTTTGGAARVLTWLER 741
>gi|261401046|ref|ZP_05987171.1| glycine cleavage system T protein [Neisseria lactamica ATCC 23970]
gi|269209057|gb|EEZ75512.1| glycine cleavage system T protein [Neisseria lactamica ATCC 23970]
Length = 366
Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEE 62
S+ V G +A F + +I DV L + A SA+L G ++ ++ + E
Sbjct: 52 SHMLVTDVAGANAKVFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNE 108
>gi|105894640|gb|ABF77805.1| glycine cleavage system T protein [Burkholderia cenocepacia AU
1054]
gi|116646259|gb|ABK06900.1| glycine cleavage system T protein [Burkholderia cenocepacia HI2424]
Length = 401
Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G F + I V L A S +L PQG ++ ++ E+ F
Sbjct: 81 SHMCVVDFTGSRVRAFFEHAIANHVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFF 140
Query: 66 ILEIDRSKRD 75
+ ++ +
Sbjct: 141 RVVVNAGTAE 150
>gi|331697182|ref|YP_004333421.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190]
gi|326951871|gb|AEA25568.1| Aminomethyltransferase [Pseudonocardia dioxanivorans CB1190]
Length = 369
Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 54/145 (37%), Gaps = 8/145 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ ++ G A L +T + + A+ S + G +L ++ ++ E+ F
Sbjct: 55 LSHMGEVEFEGPQAGAALDHALTGAMSAMRVGRAKYSLLCADDGGVLDDLVVYRLAEERF 114
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
++ ++ + + +L R+ +V + + + +++ + ++
Sbjct: 115 LVVVNAANAGADATELAR---RAEGFDVRVRDRSADTALVAVQGPRAAEIVRGLVPDPAV 171
Query: 123 ADVLLHRTWGHNEKIASDIKTYHEL 147
D L R + + I+
Sbjct: 172 VDEL--RYYAATPAAVAGIEILLAR 194
>gi|301629455|ref|XP_002943855.1| PREDICTED: hypothetical protein LOC100488488 [Xenopus (Silurana)
tropicalis]
Length = 829
Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +K+ G A + ++ DV+ LP R +L G I+ + DT
Sbjct: 509 SHMGQLKLVGPGAAAAFETLVPVDVIGLPEGKQRYGLLLNDAGGIIDDLMFFNQGGDTLF 568
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
+ ++ + + + + ++ + P G++ + + S +
Sbjct: 569 VIVNGACKAGDVAHIQA-RIGDRCRVLPMPDYGLLALQGPQAATALSRLV 617
>gi|239906460|ref|YP_002953201.1| aminomethyltransferase [Desulfovibrio magneticus RS-1]
gi|239796326|dbj|BAH75315.1| aminomethyltransferase [Desulfovibrio magneticus RS-1]
Length = 362
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 66/302 (21%)
Query: 13 KVCGKSAIPFLQAI---ITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ G A QA+ +T D+ TL R +L G ++ +I + D ++L +
Sbjct: 58 TLSGDGAA---QALGKAVTHDLATLAPGKCRYGFLLNENGGVIDDLIIYCLGVDDYMLVV 114
Query: 70 DRSKR----DSLIDKL----LFYKLRSN-VIIEIQ-PINGVVLSWNQEHTFSN---SSFI 116
+ S+ +++ +L F + + I++Q P+ VL FS +F+
Sbjct: 115 NGSRIVVDFETIKGRLPAGSNFRNVSAETAKIDLQGPLAFEVLRDRLPGDFSGLKYFNFV 174
Query: 117 DERFSIADVLLHRTWGHNE-------KIASDIKTYHE-----------------LRINHG 152
F +++ RT E + + + +R+ G
Sbjct: 175 WTDFQGVKMMVSRTGYTGELGYELFLPASHAVALWEAITADPRVAPAGLGARDTIRLEMG 234
Query: 153 IVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI-----IRKRPMII 207
D P +A L + S + +R++ + +
Sbjct: 235 YPLYGQDL-DEEHTPAEAGYGWL--------------LTSPADYVGKGKAAGLRQKLIGL 279
Query: 208 TGTDDLPPSGSPILTD--DIEIGTLGVVVGKKALAI-ARIDKVDHAIKKGMALTVHGVRV 264
+ D +G + +L + VD + + V RV
Sbjct: 280 EIPGRRSARHGDAVCDKSGKTVGVVTSASFAPSLGHAVALAYVDASAAEAKDFVVKAARV 339
Query: 265 KA 266
+
Sbjct: 340 EL 341
>gi|226291388|gb|EEH46816.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb18]
Length = 534
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52
L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L
Sbjct: 278 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 336
Query: 53 LYFLISKIEEDTFILEIDRS 72
+ ED F + I
Sbjct: 337 IS-RTGYTGEDGFEISIPTD 355
>gi|77358750|ref|YP_338415.1| sarcosine oxidase, alpha subunit, truncation [Burkholderia mallei
ATCC 23344]
gi|66967548|gb|AAY59105.1| sarcosine oxidase, alpha subunit, truncation [Burkholderia mallei
ATCC 23344]
Length = 889
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 552 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 611
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 612 MTTTTGGAARVLTWLER 628
>gi|67640590|ref|ZP_00439391.1| sarcosine oxidase, subunit alpha [Burkholderia mallei GB8 horse 4]
gi|166999516|ref|ZP_02265353.1| sarcosine oxidase, alpha subunit [Burkholderia mallei PRL-20]
gi|254200377|ref|ZP_04906742.1| sarcosine oxidase, alpha subunit [Burkholderia mallei FMH]
gi|254204402|ref|ZP_04910755.1| sarcosine oxidase, alpha subunit [Burkholderia mallei JHU]
gi|147747989|gb|EDK55064.1| sarcosine oxidase, alpha subunit [Burkholderia mallei FMH]
gi|147753988|gb|EDK61052.1| sarcosine oxidase, alpha subunit [Burkholderia mallei JHU]
gi|238521337|gb|EEP84789.1| sarcosine oxidase, subunit alpha [Burkholderia mallei GB8 horse 4]
gi|243064358|gb|EES46544.1| sarcosine oxidase, alpha subunit [Burkholderia mallei PRL-20]
Length = 892
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 555 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 614
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 615 MTTTTGGAARVLTWLER 631
>gi|167828490|ref|ZP_02459961.1| sarcosine oxidase, alpha subunit [Burkholderia pseudomallei 9]
Length = 541
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 204 STLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGDQHFM 263
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ L
Sbjct: 264 MTTTTGGAARVLTWLER 280
>gi|325117544|emb|CBZ53096.1| glycine cleavage T-protein domain containing protein [Neospora
caninum Liverpool]
Length = 1872
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKI 60
+ V G+ + L +++ D+ + A+ + +L +G IL ++K+
Sbjct: 1152 RRVWHVHGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLILDDCFVAKL 1204
>gi|156121039|ref|NP_001095666.1| obscurin [Bos taurus]
gi|154425668|gb|AAI51373.1| MGC166429 protein [Bos taurus]
gi|296486223|gb|DAA28336.1| hypothetical protein LOC537193 [Bos taurus]
Length = 813
Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 12/72 (16%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLTLPYKIARG---SAILTPQGKILLYFLISKIEEDTF 65
++ V G+ A IT + PY R A+LTP GK +S+
Sbjct: 321 RAMPFVDGEDA------QITCTIEGAPYPQIRWYKDGALLTPGGKYQT---LSEPRSGLL 371
Query: 66 ILEIDRSKRDSL 77
+LEI + + L
Sbjct: 372 VLEIRAAGTEDL 383
>gi|156083058|ref|XP_001609013.1| glycine cleavage T-protein (aminomethyl transferase) domain
containing protein [Babesia bovis T2Bo]
gi|154796263|gb|EDO05445.1| glycine cleavage T-protein (aminomethyl transferase) domain
containing protein [Babesia bovis]
Length = 732
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 11/141 (7%)
Query: 121 SIADVLLHRTWGHNEKI-ASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS 179
A L +T ++E + + Y R+ GI+ + D ++ L+
Sbjct: 407 PGAIRALAKTLANHELVLPAGFTVYDAARMEAGIMRTDVDIPTEASPIQTSVTWSLDMKR 466
Query: 180 LTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDD--IEIGTLGVVVGKK 237
L G G+ + + + R +++ +++ + IL +D IG + +
Sbjct: 467 LRYGTMFGKPHIIAQMTNGVAKVRVGVMS--NEMLTTDCYILKEDTRKPIGFITSSTWSQ 524
Query: 238 AL------AIARIDKVDHAIK 252
L A + H +
Sbjct: 525 GLQMYLSQAYVNTEHARHDMT 545
>gi|110679550|ref|YP_682557.1| putative dimethyl sulfoniopropionate demethylase [Roseobacter
denitrificans OCh 114]
gi|109455666|gb|ABG31871.1| aminomethyl transferase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 367
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 95/311 (30%), Gaps = 72/311 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + D+ + I+ G +L + K+ ED + + I
Sbjct: 64 VELRGPDAARLMQMLTPRDLRGMLPGRCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 123
Query: 72 SKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117
S L+ + Y+L +V+I+ ++ + + + + F D
Sbjct: 124 S---DLLLWVKGISNGYRL--DVLIDEPDVSPLAIQGPKADELAARIFGDSIRDIKFFRF 178
Query: 118 ------------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------ 147
R + + IA + + L
Sbjct: 179 GLFEFEGREMVVARSGYSKQGGFEVYVEGSDIAMPL--WDALFKAGEDLNVRAGCPNGIE 236
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206
RI G++ D PH+ + GC IG++ + R+ +++ R +
Sbjct: 237 RIEGGLLSYGNDMTDDNT-PHECGLGRFCDTQTAIGC-IGRDALLRVAKEGPVQQIRAIA 294
Query: 207 ITGTD-DLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259
I G L + D +G + A+ + R+ D
Sbjct: 295 IEGDRLPLCDRAWGLYAGDTRVGQVTSAAWSPDHHTNVAIGMVRMTHWDT---------- 344
Query: 260 HGVRVKASFPH 270
G R++ P
Sbjct: 345 -GTRLRVETPD 354
>gi|163794496|ref|ZP_02188467.1| sarcosine oxidase, alpha subunit family protein [alpha
proteobacterium BAL199]
gi|159180220|gb|EDP64743.1| sarcosine oxidase, alpha subunit family protein [alpha
proteobacterium BAL199]
Length = 1003
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 69/325 (21%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A FL + T L R +L G ++ + +++ +D F
Sbjct: 670 STLGKIDIRGGDAAEFLNRVYTNAWAKLGTGRCRYGFMLKEDGMVMDDGVTTRLADDHFH 729
Query: 67 LEIDRSKRDSLIDKLLFY----------KLRSNVI-----------------------IE 93
+ +++ L Y +L S V I+
Sbjct: 730 MTTTTGGAARVMNWLEEYLQTEWPEMDVRLTS-VTEQWAVASICGPKCRELLGRLCSDID 788
Query: 94 IQPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI-- 141
+ ++ + T + R S L W +D+
Sbjct: 789 LGNDAFPFMAMR-DGTVAEIPARVFRISFTGELSFEINVPTRYGLALWEALMTAGADLGI 847
Query: 142 -----KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
+ H LR G + D ++ P D MD + +S +K +IG+ ++R
Sbjct: 848 TPYGTEAMHVLRAEKGFIIVGQD-TDGSVTPLDLGMDWI--VSKSKPDFIGKRGLARPDL 904
Query: 197 RNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVV------GKKALAIA 242
RK+ + + D + P G ++ +G + A+A+
Sbjct: 905 HKPDRKQLVGLLTEDPTFVLPEGGHVVETVKPKPPMAMLGHVTSSYYSPSAGRSIAMALV 964
Query: 243 RIDKVDHAIKKGMALTVHGVRVKAS 267
+ + L + V +
Sbjct: 965 KGGHARKGQTLYVPLEGRTIPVTVA 989
>gi|332717003|ref|YP_004444469.1| sarcosine oxidase, alpha subunit [Agrobacterium sp. H13-3]
gi|325063688|gb|ADY67378.1| sarcosine oxidase, alpha subunit [Agrobacterium sp. H13-3]
Length = 974
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 73/248 (29%), Gaps = 64/248 (25%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A FL + + +L + R +L G +++ ED +I+
Sbjct: 646 VDVQGADAAEFLDRLYCNAMKSLKVGMVRYGLMLREDGHAYDDGTCARLGEDHYIVTTTT 705
Query: 72 SKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTW 131
++ + + F + + + + W
Sbjct: 706 AQAGPVYRHMEFAR----------------------------QCLWPELDVQLISATDAW 737
Query: 132 GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVV 191
+ R+ IVD L + FP A +L
Sbjct: 738 AQLAVAGPN-----ARRLIERIVDGFD--LSNAAFPFMACAELTVC-------------- 776
Query: 192 SRIQHRNIIRKRPMIITGTDDLPPS-------GSPILTDDIEIGT--LGVVVGKKALAIA 242
+R R I+ + +L G+ +++ +EIG G +AL +
Sbjct: 777 ------GGLRARLFRISFSGELAYEIAVPARYGNALMSRLMEIGADLGATAYGTEALGVM 830
Query: 243 RIDKVDHA 250
RI+K A
Sbjct: 831 RIEKGHAA 838
>gi|163735102|ref|ZP_02142538.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
gi|161391560|gb|EDQ15893.1| aminomethyl transferase family protein, putative [Roseobacter
litoralis Och 149]
Length = 349
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 72/311 (23%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + D+ + I+ G +L + K+ ED + + I
Sbjct: 46 VELRGPDAARLMQMLTPRDLRGMLPGRCFYIPIVDETGGMLNDPVAVKLAEDRWWISIAD 105
Query: 72 SKRDSLIDKLL----FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID---------- 117
S L+ + Y+L +V+I+ ++ + + + + F D
Sbjct: 106 S---DLLLWVKGISNGYRL--DVLIDEPDVSPLAIQGPKADELAARIFGDSIRDIKFFRF 160
Query: 118 ------------ERFSIADVLLHRTWGHNEKIASDIKTYHEL------------------ 147
R + + IA + + L
Sbjct: 161 GLFAFEGREMVVARSGYSKQGGFEVYVEGADIAMPL--WDALFKAGEDLNVRAGCPNGIE 218
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPMI 206
RI G++ D PH+ + GC IG++ + R+ +++ R +
Sbjct: 219 RIEGGLLSYGNDMTDDNT-PHECGLGRFCDTQTAIGC-IGRDALLRVAKEGPVQQIRAIA 276
Query: 207 ITGTD-DLPPSGSPILTDDIEIGTLGVVVG------KKALAIARIDKVDHAIKKGMALTV 259
+ G L + D +G L A+ + R+ D
Sbjct: 277 VEGDQLPLCDRAWGLYAGDTRVGQLTSAAWSPDHQTNVAIGMVRMTHWDT---------- 326
Query: 260 HGVRVKASFPH 270
G +++ P
Sbjct: 327 -GTKLRVETPD 336
>gi|110679006|ref|YP_682013.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh
114]
gi|109455122|gb|ABG31327.1| sarcosine oxidase, alpha subunit [Roseobacter denitrificans OCh
114]
Length = 1000
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R +L G I +I +I +D F
Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRIRDDLFH 724
Query: 67 LEIDRSKRDSLID 79
+ S+++
Sbjct: 725 VTTTTGGAASVLN 737
>gi|295667902|ref|XP_002794500.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb01]
gi|226285916|gb|EEH41482.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb01]
Length = 490
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52
L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L
Sbjct: 234 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 292
Query: 53 LYFLISKIEEDTFILEIDRS 72
+ ED F + I
Sbjct: 293 IS-RTGYTGEDGFEISIPTD 311
>gi|17545822|ref|NP_519224.1| sarcosine oxidase subunit alpha [Ralstonia solanacearum GMI1000]
gi|17428116|emb|CAD14805.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 1003
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 85/272 (31%), Gaps = 56/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A+ L + T L R +L G + + ++ + F+
Sbjct: 666 STLGKIDIQGPDAVKLLNWVYTNPWGKLDVGKCRYGLMLDENGMVFDDGVTVRLADQHFM 725
Query: 67 LEIDRSKRDSLIDKLLF--------YKLR------------------SNVI------IEI 94
+ ++ L K+R V+ I+
Sbjct: 726 MTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCQDIDF 785
Query: 95 QPINGVVLSWNQEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIAS--DIK 142
+S+ T + + R S + L W + DI
Sbjct: 786 GNEAFPFMSYRN-GTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAEFDIT 844
Query: 143 TY-----HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
Y H LR G + D +I P D M L ++ TK C +G+ ++R
Sbjct: 845 PYGTETMHVLRAEKGYIIVGQD-TDGSITPSDLGMGGL--VAKTKDC-LGKRSLARSDTA 900
Query: 198 NIIRKRPMIITGTDD--LPPSGSPILTDDIEI 227
RK+ + + D + P G+ I+ D ++
Sbjct: 901 KAGRKQFVGLLTDDAQCVLPEGAQIIDKDTQV 932
>gi|149202120|ref|ZP_01879093.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
TM1035]
gi|149144218|gb|EDM32249.1| sarcosine oxidase, alpha subunit family protein [Roseovarius sp.
TM1035]
Length = 976
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I V G A FL + T TL R +L G ++ +++ E
Sbjct: 641 CDVSTLGKIDVQGADAARFLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTCARMAET 700
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ + ++ L F
Sbjct: 701 HFVMTTTTAAAGQVMRHLEF 720
>gi|163734075|ref|ZP_02141516.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149]
gi|161392611|gb|EDQ16939.1| sarcosine oxidase, alpha subunit [Roseobacter litoralis Och 149]
Length = 1000
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R +L G I +I +I +D F
Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRIRDDLFH 724
Query: 67 LEIDRSKRDSLID 79
+ S+++
Sbjct: 725 VTTTTGGAASVLN 737
>gi|77404199|ref|NP_001029165.1| aminomethyltransferase, mitochondrial precursor [Canis lupus
familiaris]
gi|11132475|sp|Q9TSZ7|GCST_CANFA RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|6562361|emb|CAB62567.1| glycine cleavage system T-protein [Canis lupus familiaris]
Length = 403
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 48/272 (17%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
K+ G + +++++ D+ L S G I +++ E + +
Sbjct: 88 KILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAG 147
Query: 73 KRDSLIDKLLFYKLR------SNVIIEIQPINGVVLSWNQEHTFSNSSFID--------- 117
D + L+ K+R S+V +E+ + L + D
Sbjct: 148 CWDKDLA-LMQGKVRELQNMGSDVSLEVVDNALLALQGPTATQVLQAGVADDLRKLPFMT 206
Query: 118 ----ERFSIADVLLHR------------------------TWGHNEKIASDIKTYHELRI 149
E F ++ + R + E + + LR+
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSLRL 266
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMIIT 208
G+ +D P + + G + G V+ Q + +++R + +T
Sbjct: 267 EAGLCLYGSDI-DEHTTPVEGSLSWTLGKRRRAAMDFPGASVII-AQLKGKVQRRRVGLT 324
Query: 209 GTDDLPPSGSPILT-DDIEIGTLGVVVGKKAL 239
+ SPIL + IGT+ L
Sbjct: 325 CEGAPVRAHSPILNMEGTVIGTVTSGCPSPCL 356
>gi|153810338|ref|ZP_01963006.1| hypothetical protein RUMOBE_00719 [Ruminococcus obeum ATCC 29174]
gi|149833517|gb|EDM88598.1| hypothetical protein RUMOBE_00719 [Ruminococcus obeum ATCC 29174]
gi|295108354|emb|CBL22307.1| Glycine cleavage system T protein (aminomethyltransferase)
[Ruminococcus obeum A2-162]
Length = 329
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 11 FIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEID 70
+++ GK A+ LQ I +++ + ++ +A L G+I+ ++ + + + +
Sbjct: 29 IVEITGKDALEVLQKIYISNISKVAVGRSKYTASLDENGEIIDDVIVMHMADGLYW--VS 86
Query: 71 RSKRDSLIDKLLFYKLRSNVIIE-IQPINGVVLSWNQEHTFSNSSFID 117
L+ + +K +++ + I + + + ++ +D
Sbjct: 87 DLYGPRLLPWIEKHKGTADIQTKIITYDWDMYAIQGPDSINAMNAMLD 134
>gi|293378111|ref|ZP_06624282.1| glycine cleavage T-protein (aminomethyl transferase) [Enterococcus
faecium PC4.1]
gi|292643268|gb|EFF61407.1| glycine cleavage T-protein (aminomethyl transferase) [Enterococcus
faecium PC4.1]
Length = 459
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
V G F L R + +G+I+ ++ KI +DTF
Sbjct: 59 VSGPDVAEFFNRFFVNKFSKLKVGGIRHGILCNEKGQIMTDGVVMKINDDTF 110
>gi|220914205|ref|YP_002489514.1| FAD dependent oxidoreductase [Arthrobacter chlorophenolicus A6]
gi|219861083|gb|ACL41425.1| FAD dependent oxidoreductase [Arthrobacter chlorophenolicus A6]
Length = 835
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 34/272 (12%), Positives = 79/272 (29%), Gaps = 54/272 (19%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF------ 65
++V G A L + T ++ +L G I ++++E++ F
Sbjct: 517 LQVVGPGAEALLHRLSTGNITK-KPGAVTYCLLLEHDGGIRSDVTVARLEQEKFQLGVNS 575
Query: 66 -----ILEIDR---SKRDSLI-DK----------------LLFYKLRSNVIIEIQPINGV 100
L ++ S+ D L + + + +G+
Sbjct: 576 NVDFDYLRVEARKQSEADPAQWAHVTDITGSTCCIGLWGPLAREVI-GKLSSDDLSNDGL 634
Query: 101 VLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE-----------------KIASDIKT 143
+E + R S L + E +A
Sbjct: 635 RYFRTKEISVGGIPVSAWRLSYVGELGWELYTTAEYGLKLWDLLFEAGQEFGIVAGGRGA 694
Query: 144 YHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK- 202
++ +R+ G TD P+++ + I+ K ++G E ++ + + R
Sbjct: 695 FNSMRLEKGYRLWGTDMTSEH-HPYESGLGFS--IAKDKTGFVGAESLAERKEQPATRVL 751
Query: 203 RPMIITGTDDLPPSGSPILTDDIEIGTLGVVV 234
R + + + P+ +G +
Sbjct: 752 RCLTVDYGTSVVLGKEPVYVGGEAVGYVTSAA 783
>gi|225679650|gb|EEH17934.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb03]
Length = 491
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIIT-------ADVLTLPYKIARGSAILT-PQG-----KIL 52
L +++ + + G S+ LQ++IT +D+ TL + +R S L P G ++L
Sbjct: 235 LDSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSR-SLHLNLPDGTHTPSRLL 293
Query: 53 LYFLISKIEEDTFILEIDRS 72
+ ED F + I
Sbjct: 294 IS-RTGYTGEDGFEISIPTD 312
>gi|39936909|ref|NP_949185.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris CGA009]
gi|39650766|emb|CAE29289.1| glycine cleavage system protein T2 [Rhodopseudomonas palustris
CGA009]
Length = 382
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+A+I D++ LP R + G IL +++ +
Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF 115
D L ++ + + L + L I ++ + + + F
Sbjct: 119 -DRLFLVVNAACKTEDEAHLRAH-LSDACDITALTDRALIALQGPKAEAALAKF 170
>gi|220911316|ref|YP_002486625.1| glycine cleavage system aminomethyltransferase T [Arthrobacter
chlorophenolicus A6]
gi|219858194|gb|ACL38536.1| glycine cleavage system T protein [Arthrobacter chlorophenolicus
A6]
Length = 382
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 30/167 (17%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59
LS+ + V G A FL D + + A+ S I G I+ + +
Sbjct: 50 LSHMGEVWVTGPDAAAFL------DYALVGKLSAIAVGKAKYSLICDTDGGIIDDLITYR 103
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKLR----SNVIIEIQPINGVVLSWNQEHTFSNSSF 115
+ D L + + V+ E + + +S
Sbjct: 104 LPAG----------ADGTAKYL---VVPNAGNAKVVAEALQERAAGFDVTVQDASAETSL 150
Query: 116 IDERFSIADVLLHRTWGHNE-KIASDIKTYHELRINHGIVDPNTDFL 161
I + A+ +L + + +++K Y + + + D L
Sbjct: 151 IAVQGPAAEAILLALVPAGQHSLVTELKYYAAVEVGITVNGAVQDLL 197
>gi|325964757|ref|YP_004242663.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470844|gb|ADX74529.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3]
Length = 373
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 48/329 (14%), Positives = 102/329 (31%), Gaps = 69/329 (20%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + V G A FL + + + A+ S I G I+ + + ED +
Sbjct: 50 LSHMGEVWVTGPDAGAFLDYALAGKLSAVAVGKAKYSLICQEDGGIIDDLISYRRSEDKY 109
Query: 66 ILE------------------------------------------------IDRSKRDSL 77
++ + + L
Sbjct: 110 LVVPNAGNAAVVAAALAERAANFDVRVQDASAETSLIAVQGPNAEAVLLTLVPAEQHP-L 168
Query: 78 IDKLLFYKLRSNVIIEIQPINGVVL--SWNQEHTFSNSSFIDERFSIADVLLHRTWGHNE 135
+ +L +Y + V +EI ++ + E F ++ + + LL GH
Sbjct: 169 VTELKYY---AAVEVEINGQELLLARTGYTGEDGFEIYIPNEDAAGLWEALLEAGSGHG- 224
Query: 136 KIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRI 194
I + + LR+ G+ + P A + + +SL K ++G+ ++ +
Sbjct: 225 LIPAGLACRDSLRLEAGMPLYGNELSREG-NPFAAGLGPV--VSLKKESDFMGKAALAEL 281
Query: 195 QHRN---IIRKRPMIITGTDDLPP-SGSPILTDDIEIGTLGVVVGK------KALAIARI 244
+ ++ + + G S P+L D +G + ALA +
Sbjct: 282 KELGAGSTSGRKLVGLKGLGRRAGRSHYPVLKDGNVVGEVTSGQPSPTLGYPIALAYVDV 341
Query: 245 DKVDHAIKKGMALTVHGVRVKASFPHWYK 273
+ + + L + +YK
Sbjct: 342 EHSEPGTALDIDLRGKAEPFEVVALPFYK 370
>gi|296282995|ref|ZP_06860993.1| glycine cleavage system aminomethyltransferase T [Citromicrobium
bathyomarinum JL354]
Length = 376
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 48/281 (17%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNV 90
V +L R + +L G IL +++ + L ++ + + I L + L ++
Sbjct: 87 VSSLKPGRMRYTLLLAEDGGILDDLMVTNTGQ-HVALVVNGACKWDDIAFLREH-LPDDI 144
Query: 91 IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA-------DVLLHRTW------------ 131
+ ++ E + + + D W
Sbjct: 145 TLTHHEDQALLALQGPEAVDALGELVPAAAELVFMTAGFYDWNGVPLWISRAGYTGEDGF 204
Query: 132 ------GHNEKIASDIK-----------TYHELRINHGIVDPNTDFLPSTIFPHDALMDL 174
H EK+A+ + LR+ G+ D + + P A +L
Sbjct: 205 EISVPADHAEKLAAALTEDKRVKPIGLGARDSLRLEAGLPLYGHDLT-AEVDPVTA--EL 261
Query: 175 LNGISLTK---GCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLG 231
+S + G Y G +S +KR ++ GS I D ++GT+
Sbjct: 262 TFALSKKRREAGGYHGHARISGALSDGAAQKRVGLVLDGRLPAREGSEIFAGDAQVGTVT 321
Query: 232 VV----VGKKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
+A+ +D I + + V R+ A
Sbjct: 322 SGGFSPTLGHPIAMGYVDAAHAEIDTALEVQVRNKRLPARV 362
>gi|330951916|gb|EGH52176.1| aminomethyltransferase [Pseudomonas syringae Cit 7]
Length = 968
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 51/315 (16%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWN---------QEHTFSNSS 114
F + S D + ++L + + + ++I + + + N E ++
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759
Query: 115 FIDERFSIADVLLHRTWGHNEKI-----------ASDIKTYHELRINHGIVDPNTDF--- 160
E F V L G ++ + H LR+ +V+ F
Sbjct: 760 LSAEGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALVEAGKVFDMR 819
Query: 161 ----LPSTIFPHD----------------ALMDLLNGISLTKGCYIGQEVVSRIQHRNII 200
+ + A +D+ +S +K ++G+ V ++ +
Sbjct: 820 PFGVETQRLLRLEKGHVIISQDTDGMTHPAEIDMGWAVSRSKPFFVGRRSVDILEAQPQK 879
Query: 201 RKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKK 253
RK + LP G +L G + +A A D+ +
Sbjct: 880 RKLVGFTLPKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPGQQI 939
Query: 254 GMALTVHGVRVKASF 268
+ + GV V+A+
Sbjct: 940 PIRVE-DGVVVQATV 953
>gi|126726828|ref|ZP_01742667.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2150]
gi|126703786|gb|EBA02880.1| glycine cleavage T protein (aminomethyl transferase)
[Rhodobacterales bacterium HTCC2150]
Length = 368
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A +Q + D+ + ++ QG +L ++ K+ ED + + I
Sbjct: 64 IAVRGPDAKSLMQVLTPRDLRRMVVGQCMYIPVVDEQGGMLNDPVLVKLAEDEYWISIAD 123
Query: 72 S 72
S
Sbjct: 124 S 124
>gi|301061882|ref|ZP_07202612.1| aminomethyltransferase [delta proteobacterium NaphS2]
gi|300443986|gb|EFK08021.1| aminomethyltransferase [delta proteobacterium NaphS2]
Length = 415
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 64/288 (22%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKI--ARGSAILTPQGKILLYFLISKIEEDT 64
S+ + GK + FLQ ++T + L A+ + I T G + + + +D
Sbjct: 53 SHMGRFIIRGKDGLAFLQHVLTNNAAALDIYRVGAQYTLIPTETGGAVDDAYLYRFRQDQ 112
Query: 65 FILEIDRSKR----------------DSLIDKLLFYKL---------------------- 86
F+L ++ + R L+D +
Sbjct: 113 FLLVVNAANRKKDWQHFRQFMNDFHGLELLDHTAEMAMLSLQGPNSREILHNIISHGQLP 172
Query: 87 --RSNV--IIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIK 142
R N + I ++ ER + R + +
Sbjct: 173 EPRRNAVSTVSISGTEVLLACTGYTGEPIGFELFMERAHGPG--IWRRLLNEGATPVGLG 230
Query: 143 TYHELRINHGIVDPNTDFLPST---IFPHDALMDLLNGISLT--KGCYIGQE-------- 189
LR+ G+ + T P + +S + KG ++G++
Sbjct: 231 ARDTLRLEAGLPLYGHELGVDTDGGEIPILSCPTAKPAVSFSPLKGDFVGKQALKNQFKD 290
Query: 190 ----VVSRIQHRNIIRKRPMIITGTD-DLPPSGSPILTDDIEIGTLGV 232
+ Q+ + + I + + GS +L + +G +
Sbjct: 291 LERIINHDCQNLAHLPRIIRPIALIERGVARPGSMVLKEGNPVGVITS 338
>gi|167033108|ref|YP_001668339.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida GB-1]
gi|166859596|gb|ABY98003.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
putida GB-1]
Length = 967
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 43/114 (37%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ +S + V G A L+ + T LP R + + G ++ + +++ E
Sbjct: 638 LIDVSTLGGLDVRGPDAAELLERLYTFGFAKLPVGRTRYALMTNEHGVVIDDGVCARLGE 697
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFI 116
F + S D + ++L + + + ++I + + + N S
Sbjct: 698 QHFYVTATTSGVDRIYQQMLKWNAQWRLDVDITNVTAALAAVNLAGPLSRQVLA 751
>gi|300024623|ref|YP_003757234.1| sarcosine oxidase subunit alpha family [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526444|gb|ADJ24913.1| sarcosine oxidase, alpha subunit family [Hyphomicrobium
denitrificans ATCC 51888]
Length = 994
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S ++V G A FL + + TL AR A+L G ++ ++ ED
Sbjct: 656 CDVSTLGKVEVHGADAGKFLDRVYINMMSTLQVGKARYGAMLREDGIMMDDGTAARFAED 715
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+ + ++ L
Sbjct: 716 RYFVTTTTVNAIKVVQHLEL 735
>gi|253699039|ref|YP_003020228.1| glycine cleavage system protein T [Geobacter sp. M21]
gi|251773889|gb|ACT16470.1| glycine cleavage system T protein [Geobacter sp. M21]
Length = 363
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 31 VLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLID 79
V +P +R +L G ++ ++ ++ ED ++ ++ + +
Sbjct: 76 VKGIPIGRSRYGFLLNQSGGVIDDLIVFRLAEDEVMIVVNAATAPNDFK 124
>gi|227548872|ref|ZP_03978921.1| aminomethyltransferase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079093|gb|EEI17056.1| aminomethyltransferase [Corynebacterium lipophiloflavum DSM 44291]
Length = 359
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 107/310 (34%), Gaps = 66/310 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQ-AIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I V G A FL A+I++ + TL A+ S I+ G I+ + K+ ED
Sbjct: 48 LSHMGEIDVIGPDAGAFLDYALISS-LSTLKVGKAKYSMIVAEDGGIVDDLISYKLAEDR 106
Query: 65 FILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQE------HTFSNSSF 115
+++ + + D++ L F R+ +V + + +++ + S
Sbjct: 107 YLVVPNAANTDAV--WLAFQS-RAGDFDVELTNRSEEIALIAVQGPRSLEVLEPLIDGSP 163
Query: 116 ID------------ERFSIADVLLHRTWGHNEK----------------------IASDI 141
D E D+++ RT E A +
Sbjct: 164 GDLSYYSAGEMKLGEGADAIDIIVARTGYTGEDGFEIYSTFENAPAVWEAVISHGTACGL 223
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
LR+ + + + I P +A M + + ++G++ + R
Sbjct: 224 AARDSLRLEASMPLYGHELT-ADITPVEAGMGR--AFAKKEADFVGKQAL-------TGR 273
Query: 202 KRPMIITGTDD----LPPSGSPILTDDIEIGTLGVVVGKKAL----AIARIDKVDHAIKK 253
+ ++I G G+ + D +IG + L A+A +D I
Sbjct: 274 EPSVVIAGLTSQDRRAAREGAEVFIGDDKIGVVTSGQPSPTLGYPVALAHLDPERAEIGT 333
Query: 254 GMALTVHGVR 263
+ + + G R
Sbjct: 334 DVEIDIRGRR 343
>gi|84514731|ref|ZP_01002095.1| sarcosine oxidase, alpha subunit [Loktanella vestfoldensis SKA53]
gi|84511782|gb|EAQ08235.1| sarcosine oxidase, alpha subunit [Loktanella vestfoldensis SKA53]
Length = 1000
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F+ + T L AR +L G I +I ++ D F
Sbjct: 665 STLGKIEVSGPDATEFMNRMYTNPWTKLGVGRARYGLLLGEDGFIRDDGVIGRMRHDLFH 724
Query: 67 LEIDRSKRDSLID 79
+ +++
Sbjct: 725 VTTTTGGAARVLN 737
>gi|260460563|ref|ZP_05808814.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
gi|259033668|gb|EEW34928.1| sarcosine oxidase, alpha subunit family [Mesorhizobium
opportunistum WSM2075]
Length = 997
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 85/301 (28%), Gaps = 71/301 (23%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A F++ + T L R +L G I ++ ++ D F
Sbjct: 664 STLGKIEVVGPDAAKFMELLYTNPWEKLEPGRCRYGIMLREDGFIYDDGVVGRLAPDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVII--------EIQPINGVVLSWNQEHTFSNSSFI-- 116
+ +++ + Y I V+ + + +
Sbjct: 724 VTTTTGGAPRVMNHMEDY---LQTEFPHLNVWLTSITEQWAVIAVQGPKSRDIIAPLVEG 780
Query: 117 ----DERFSIADVL----------------------------------LHRTWGHNEKIA 138
DE V W +K
Sbjct: 781 IDMSDEALPHMSVREGKICGVPTRLFRMSFTGERGFEVNVPADYGQAVWEALWAEGQKHG 840
Query: 139 SDI---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195
+ + H LR G + D T+ P DA +D + K ++G ++R
Sbjct: 841 AAAYGTEAMHVLRAEKGYIIVGQD-TDGTVTPGDAGLDW--AVGKKKADFVGIRGLTRPD 897
Query: 196 HRNIIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKK------ALAI 241
RK+ + + D + G+ I+ D + IG + + ALA+
Sbjct: 898 LVAKGRKQLVGLKTKDPKVVLEEGAQIVEDPKQAIPMKMIGHVTSSYWSENCGRSIALAL 957
Query: 242 A 242
Sbjct: 958 V 958
>gi|163759509|ref|ZP_02166594.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
gi|162283106|gb|EDQ33392.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
Length = 851
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
SN + +V G+ A FL ++T + + +L GK++ F I+K+ + F+
Sbjct: 490 SNFAKYEVSGEGAEAFLNHLMTNTMPK--TGRIVLTPMLNDNGKLIGDFTIAKLSDTRFM 547
Query: 67 L 67
+
Sbjct: 548 V 548
>gi|1507668|dbj|BAA12709.1| ORF N313 [Schizosaccharomyces pombe]
Length = 313
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 33/71 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
V G++A +L++I + + L + SA G I+ +ISK + +T+ + + +
Sbjct: 79 VRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDGNTYYIVTNAAC 138
Query: 74 RDSLIDKLLFY 84
+ L +
Sbjct: 139 SEKDEANLKKH 149
>gi|148256735|ref|YP_001241320.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. BTAi1]
gi|146408908|gb|ABQ37414.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. BTAi1]
Length = 384
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ D++ +P R + +G IL +++ E +L ++ + +D+
Sbjct: 76 ADAAAALERLVPQDIIGIPPGRQRYAQFTNAEGGILDDLMVANFGE-HLVLVVNAACKDA 134
Query: 77 LIDKLL 82
I L
Sbjct: 135 DIQLLR 140
>gi|91774809|ref|YP_544565.1| aminomethyltransferase [Methylobacillus flagellatus KT]
gi|91708796|gb|ABE48724.1| aminomethyltransferase [Methylobacillus flagellatus KT]
Length = 961
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 85/275 (30%), Gaps = 51/275 (18%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+V G A FL+ T +R + +L G ++ L ++ ++ F
Sbjct: 642 SSFGKIEVRGPEAGLFLERFFTGRYADQAIGESRYTMLLDESGVVVDDGLAHRLGDELFY 701
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS------------- 113
L S ++ ++ ++ + I + + G + N +
Sbjct: 702 LTSGTSNAAAVYREMQRWQQIWQLDIGLVNVTGAYAAINVAGPLARQVLSGLVNFNLAEQ 761
Query: 114 ---SFIDERFSIADVLLHR-------TWGHNEKIASDIKTYHE----------------- 146
S D + L R T+ + + +
Sbjct: 762 QPHSARDTEIAGVPTRLLRVAFVSDSTYELHVPTPQAAFVWEQVMRAGSSLGLKPFGTDA 821
Query: 147 ---LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKR 203
LR+ G P D P + + I++ K +IG+ + I R ++K
Sbjct: 822 QRILRLEMGHPMPGID-TDGLTNPLEIGAQ--HAIAMDKPDFIGKRSLQIIAKR-PLKKA 877
Query: 204 PMIIT----GTDDLPPSGSPILTDDIEIGTLGVVV 234
+ +LP + ++ + G + +
Sbjct: 878 LVAFALKPGFAGELPFECNLVIRNGEIEGRVTSIA 912
>gi|321477545|gb|EFX88503.1| hypothetical protein DAPPUDRAFT_310693 [Daphnia pulex]
Length = 110
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 4/71 (5%)
Query: 115 FIDERFSIADVLLHRTWGHNEKIAS----DIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
F+D R + + I + Y RI GI + + +
Sbjct: 40 FVDPRLQALGLRVLTVSQTPFPIQNIPRGTEDDYQFFRIQLGISEAPGNLISGKSIILQH 99
Query: 171 LMDLLNGISLT 181
L S
Sbjct: 100 GFQDLKAFSWN 110
>gi|186470708|ref|YP_001862026.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
gi|184197017|gb|ACC74980.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
phymatum STM815]
Length = 988
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 31/72 (43%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I+V G A FL+ + + L + R + + G ++ +I+++ +D F
Sbjct: 649 IEVRGPQAAEFLERVYVSKYAGLKAGMTRYAVMCDESGVVIDDGVIARLADDHFYFTTTT 708
Query: 72 SKRDSLIDKLLF 83
S ++ +L
Sbjct: 709 SGAAAIYRELSR 720
>gi|255264758|ref|ZP_05344100.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62]
gi|255107093|gb|EET49767.1| sarcosine oxidase subunit alpha [Thalassiobium sp. R2A62]
Length = 975
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 49/332 (14%), Positives = 96/332 (28%), Gaps = 75/332 (22%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G+ A L T + TL R +L G +L +++ +
Sbjct: 641 CDVSTLGKIDIQGQDAAALLDLAYTNMMSTLKVARVRYGLMLREDGHVLDDGTCARLGDQ 700
Query: 64 TFILEIDRSKRDSLIDKLLFYK--LR--SNVIIEIQPINGVVLSWNQEHT------FSNS 113
+++ + ++ L F + LR V + + + F +S
Sbjct: 701 HYVITTTTTAAGLVMRHLEFIRQALRPDWRVSLASATEQWAQFAVAGPKSRELLSRFLDS 760
Query: 114 SFIDERFSIADV-------------------------------------LLHRTWGHNEK 136
+ DE + LL T
Sbjct: 761 TIDDENWPFMACGNVEVAGVSGRLFRISFSGEHAYEIAVPARYGDSLFRLLTATAETMGG 820
Query: 137 IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQH 196
++ + LRI G + + + D MD + +S+ K C IG+ + +R+
Sbjct: 821 GPYGMEALNVLRIEKGFITHAE--IHGRVTAFDIGMDRM--VSVKKDC-IGKTMAARV-- 873
Query: 197 RNIIRKR-----PMIITGTDDLPPSGSPILTDDI------EIGTLGVV------VGKKAL 239
++ R I +L +G+ + G + V L
Sbjct: 874 -GLVEDRDELIGLRPIAFDGEL-TAGAHLFERGADATRQNSAGYVTSVCYSPTLCQNLGL 931
Query: 240 AIAR--IDKVDHAIKKGMALTVHGVRVKASFP 269
R D++ I+ L + P
Sbjct: 932 GFLRDGRDRMGETIRLVDHLRSVETLCEVVNP 963
>gi|326936022|ref|XP_003214058.1| PREDICTED: aminomethyltransferase, mitochondrial-like, partial
[Meleagris gallopavo]
Length = 205
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
+V G+ + FL++++ D+ L + + G I+ +++ ED + +
Sbjct: 1 RVYGRDRVRFLESLVVGDIAELLPGQGTLTLLTNECGGIVDDLIVTNTVEDHLYVVSNAG 60
Query: 73 KRDSLIDKLLFY----KLR---SNVIIEIQPINGVVLSWNQEHTFSNSSFIDE 118
D D+ + +LR S+V +E+ + L + D+
Sbjct: 61 CAD--KDRAVMEGRAAELRAAGSDVHLEVSDNALLALQGPSMAQVLQAGLPDD 111
>gi|13474476|ref|NP_106044.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14025229|dbj|BAB51830.1| sarcosine dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 869
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 80/279 (28%), Gaps = 56/279 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI--- 69
++ G A L I DV P + +L +G I ++++ E+ F +
Sbjct: 548 ELGGPDAAKALDWICANDVSK-PVGRLTYTQLLNTRGGIEADLTVARLAEEKFYIVTGTG 606
Query: 70 -----------------DRSKRD--SLIDKLLFY--KLRSNVIIEIQPINGVVLSWN--- 105
D D L K R +V+ + + S+
Sbjct: 607 FRTHDASWICDHIGEGHDAELTDVTEDFGTLSLMGPKAR-DVLAAVTDADVSNASFPFGH 665
Query: 106 -QEHTFSNSSFIDERFSIADVLLHRTWGHNEKIAS-----------------DIKTYHEL 147
+E + + R + L + L
Sbjct: 666 VREIAIAGHTVRALRVTYVGELGWELHVPIAATGEVFDALMAAGKTHGIRPVGYRALESL 725
Query: 148 RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKRPMI 206
R+ G +D P+ P +A + + L K ++G+ + ++ ++KR
Sbjct: 726 RLEKGYRAWGSDITPNDT-PQEAGLGW--AVKLRKNTDFVGRRALEKV-VGAPLKKRFAG 781
Query: 207 ITGTDD--LPPSGSPILTDDIEIGTLGVVVGKKALAIAR 243
+ + IL + +G L G + +
Sbjct: 782 FAVDNPEIVLLGRETILRNGEPVGYLTS--GGYGYTLGK 818
>gi|195132885|ref|XP_002010870.1| GI21784 [Drosophila mojavensis]
gi|193907658|gb|EDW06525.1| GI21784 [Drosophila mojavensis]
Length = 935
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 576 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 634
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 635 RSMSWIRKHMPEHLRAKVNVAD 656
>gi|86359191|ref|YP_471083.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42]
gi|86283293|gb|ABC92356.1| sarcosine oxidase alpha subunit protein [Rhizobium etli CFN 42]
Length = 997
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|120611805|ref|YP_971483.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1]
gi|120590269|gb|ABM33709.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1]
Length = 376
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A + +I DV+ L R +L +G I+ + +D F+
Sbjct: 57 SHMGQLRLVGPDAAAAFETLIPVDVIGLGIGKQRYGLLLNDEGGIIDDLMFVNRGDDLFV 116
Query: 67 L 67
+
Sbjct: 117 I 117
>gi|218660010|ref|ZP_03515940.1| sarcosine oxidase alpha subunit protein [Rhizobium etli IE4771]
Length = 274
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ ED F
Sbjct: 130 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 189
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 190 VTTTTGGAPRVLHHMEDY 207
>gi|13472226|ref|NP_103793.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022971|dbj|BAB49579.1| dimethylglycine dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 812
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 94/283 (33%), Gaps = 59/283 (20%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPY-KIARGSAILTPQGKILLYFLISKIEEDTFILE-ID 70
+V G +A +L I+ LP A + LT G + ++++ + ED+F L
Sbjct: 497 EVSGPNAAAWLDRILAN---RLPAVGKATLAHHLTAGGGVQAEYMVAGLGEDSFYLVSTP 553
Query: 71 RSKR---DSLIDKL----------------LFYKLRSNVIIEIQPINGVVLS-----WNQ 106
R++R D L L F + +QP+ + LS W
Sbjct: 554 RAERWNFDDLSKLLPADGSVSLKNVTNERGCFTIVGPKARDVLQPLTEIDLSNAGFPWFG 613
Query: 107 EHTFSNSSFIDERF-----------------SIADVLLHRTWGHNEKIA---SDIKTYHE 146
T S + D R + LL G EK +
Sbjct: 614 VKTGSVALASDVRLLRVNYEGELGWELYHPMAYQRQLLDAILGEGEKHGMRLVGLHALES 673
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMI 206
LR+ D P + ++ ++ I L KG ++G++ V + + RN R+ +
Sbjct: 674 LRLEKSYRAMYRDMNPE-LNALESGLERF--IRLDKGDFVGRDAVLKYKARNDQRRSVTL 730
Query: 207 ITGTDDLPPSGSP-ILTDDIEIGTLGVV------VGKKALAIA 242
TD S + +G + ALA+
Sbjct: 731 RIETDGASTLASEGLYIGGELVGRITSGGYGYTLGHDVALALL 773
>gi|288961696|ref|YP_003452006.1| sarcosine oxidase, subunit alpha [Azospirillum sp. B510]
gi|288913976|dbj|BAI75462.1| sarcosine oxidase, subunit alpha [Azospirillum sp. B510]
Length = 1000
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 90/320 (28%), Gaps = 64/320 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A F+ + T L R +L G I +I ++ D F
Sbjct: 667 STLGKIEIVGPDAAEFMNRMYTNAWTKLAPGRCRYGLLLGEDGFIRDDGVIGRLAHDRFH 726
Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106
+ ++ + Y V + V++
Sbjct: 727 VTTTTGGAARVLGMMEDYLQTEWPDLKVWLTSTTEQWSVIALQGPNARKLIEPFVEGIDL 786
Query: 107 -EHTFSNSSFIDERFSIADVLLHRTWGHNEK---------------------------IA 138
E F + + R L R E
Sbjct: 787 SEGAFPHMAVATGRICGVPTRLFRVSFTGELGFEINVPARYGRAVWEKLFEAGQRFGITP 846
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P DA + I TK ++G+ +SR
Sbjct: 847 YGTETMHVLRAEKGYIIVGQD-TDGTLTPDDAGLSW--AIGKTKPDFVGKRSLSRPDMLA 903
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKKALAIARIDKVDHA 250
RK+ + + +D + G+ I+ D + +G + A
Sbjct: 904 TNRKQLVGLLTSDPKTVLEEGAQIILDPNQPVPMEMVGHVTSSYWS---AELGRSIALAV 960
Query: 251 IKKGMALTVHGVRVKASFPH 270
I+ G A+ G V P
Sbjct: 961 IQGGRAM--EGRTVHVPMPD 978
>gi|255261321|ref|ZP_05340663.1| FAD dependent oxidoreductase/aminomethyl transferase [Thalassiobium
sp. R2A62]
gi|255103656|gb|EET46330.1| FAD dependent oxidoreductase/aminomethyl transferase [Thalassiobium
sp. R2A62]
Length = 811
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 98/318 (30%), Gaps = 72/318 (22%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIAR--GSAILTPQG-------------------K 50
I++ G A FL +I LP K R + +L Q +
Sbjct: 490 IEITGDDAQNFLDRMIC---GRLPRKAGRVGLTYLLNHQAMVKAEATIANIPASNRGPDR 546
Query: 51 ILL----------------------YFLISKIEEDTFILEIDRSKRDSLIDKLLFYK--- 85
I + + D IL + K ++ +
Sbjct: 547 IWYGSAAASEQHDMDWLASHIQDVEDVQLKSLTNDQTILVLAGPKARDVLSRASRGDWSA 606
Query: 86 -------LRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIA 138
+R + I P + +S++ E + ++ L H+ ++
Sbjct: 607 AGFPWLTVR-ECFVGIAPATVMAVSFSGELAYEIHVPNASLYAAYLALREAGAAHDLRLF 665
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ +R+ G + +D L P + + I + K ++G++ + + Q
Sbjct: 666 GALAI-DSMRMEKGYLHWKSDILTE-FDPFETGLSRF--IKIDKPDFVGRQALIQRQSEG 721
Query: 199 IIRKRPMIITGTD--DLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHA 250
RK + ++ G+ ++ D +GT+ G +A A +D
Sbjct: 722 -PRKLLVNLSLDSRHAAAHPGASVMLDGAVVGTVTS--GDWGRRTGLNIAYAFVDPPLAD 778
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + V G + A
Sbjct: 779 LGTTLEIDVLGTMIAAQV 796
>gi|50085627|ref|YP_047137.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Acinetobacter sp. ADP1]
gi|49531603|emb|CAG69315.1| sarcosine oxidase (alpha subunit) oxidoreductase protein
[Acinetobacter sp. ADP1]
Length = 973
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 45/110 (40%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S +++ G + F+ + T LP R + + G ++ + +++ E
Sbjct: 645 IDVSTLGGLEIRGPDSAEFINRLYTFGFTKLPVGKTRYAVMSNEHGVVIDDGVAARLSEH 704
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS 113
F + S D + ++L + + + ++I + + + N S +
Sbjct: 705 HFYVTATTSGVDRIYQQMLKWNAQWRLNLDITNVTTALAAVNIAGPQSRA 754
>gi|327194870|gb|EGE61702.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CNPAF512]
Length = 997
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|304394587|ref|ZP_07376506.1| aminomethyl transferase family protein [Ahrensia sp. R2A130]
gi|303293248|gb|EFL87629.1| aminomethyl transferase family protein [Ahrensia sp. R2A130]
Length = 367
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
+++ G A Q + D+ + A+ G I+ ++ K++ED F
Sbjct: 64 VQLKGPDAAELAQILSPRDLTKCKVGQGKYVAMCNHDGAIVNDPILLKLDEDLFW 118
>gi|190893443|ref|YP_001979985.1| sarcosine oxidase subunit alpha [Rhizobium etli CIAT 652]
gi|190698722|gb|ACE92807.1| sarcosine oxidase protein, alpha subunit [Rhizobium etli CIAT 652]
Length = 997
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|330958766|gb|EGH59026.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 968
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748
>gi|242003124|ref|XP_002422618.1| aminomethyltransferase,putative [Pediculus humanus corporis]
gi|212505419|gb|EEB09880.1| aminomethyltransferase,putative [Pediculus humanus corporis]
Length = 404
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILT-PQGKILLYFLISKIEEDTFILEIDR 71
K+ GK I ++ I TADV LP + G IL +++K + + +
Sbjct: 83 KIHGKDRIELIERITTADVGGLPENKGSLTVFTDKVTGGILDDLIVTKTGDGYLYVVSNA 142
Query: 72 SKRD 75
+RD
Sbjct: 143 GRRD 146
>gi|298487431|ref|ZP_07005477.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298158050|gb|EFH99124.1| Sarcosine oxidase alpha subunit [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 968
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 45/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ +
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLEQVCTDLD 759
Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
+ I R + + + + +
Sbjct: 760 LSAAGFPYLGVRLGTVAGIKARLLRVGFVGELGYEIHVPARHALTLWDALTEAGKAFDMR 819
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G V + D P + M +S +K ++G+ V ++ +
Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPAEIDMGW--AVSRSKPFFVGRRSVDILEAQ 876
Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHA 250
RK ++ LP G +L G + +A A D+
Sbjct: 877 PQKRKLVGFTLSKASPLPLEGHLVLKGPDISGNVTSCEYSSTLGMIIGMAYAAFDQSTPG 936
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + GV V+A+
Sbjct: 937 QQIPIRVE-DGVVVQATV 953
>gi|269954855|ref|YP_003324644.1| glycine cleavage system T protein [Xylanimonas cellulosilytica DSM
15894]
gi|269303536|gb|ACZ29086.1| glycine cleavage system T protein [Xylanimonas cellulosilytica DSM
15894]
Length = 379
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 49/144 (34%), Gaps = 2/144 (1%)
Query: 6 LSNQSFIKVCGKSAIPFL-QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
LS+ I + G+ A L A++ ++ AR S + G +L ++ ++ E
Sbjct: 51 LSHMGEIHLEGRQAAAALDHALVGN-ATSIAVGRARYSMLCAEDGSVLDDLIVYRLGEVH 109
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
F++ + + + +L+ +V + + +++ + + +
Sbjct: 110 FLVVANAGNAELVSRELVARAADFDVAVTDRSATTALIAVQGPRAEQIVAELTAPDDVET 169
Query: 125 VLLHRTWGHNEKIASDIKTYHELR 148
+ + S R
Sbjct: 170 LRGLPYYAAAPVTLSTGARALAAR 193
>gi|119476054|ref|ZP_01616406.1| hypothetical protein GP2143_05675 [marine gamma proteobacterium
HTCC2143]
gi|119450681|gb|EAW31915.1| hypothetical protein GP2143_05675 [marine gamma proteobacterium
HTCC2143]
Length = 837
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A +L +++ ++ +L+ G + F I K +D + L
Sbjct: 520 SVKGAGAGEWLNSLVANNIPK-GNGRVGLCHMLSKNGGVRAEFTIYKKGKDDYYL 573
>gi|145550293|ref|XP_001460825.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428656|emb|CAK93428.1| unnamed protein product [Paramecium tetraurelia]
Length = 375
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +KV G+ + F++ + T + T + IL + I+ +++K +D
Sbjct: 60 SHMGQVKVFGEDRVKFVETLTTGEFQTKKSGQSVLCLILNEKAGIIDDTIVAKR-DDHIH 118
Query: 67 LEIDRSKRDSLIDKLLF 83
+ ++ + + ++
Sbjct: 119 IVVNAGNKFIDMKQMDK 135
>gi|257068416|ref|YP_003154671.1| glycine cleavage system aminomethyltransferase T [Brachybacterium
faecium DSM 4810]
gi|256559234|gb|ACU85081.1| aminomethyltransferase [Brachybacterium faecium DSM 4810]
Length = 377
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ + + G A L + + + A+ S +LT G ++ + ++ ED F
Sbjct: 53 LSHMGEVHLRGPQAAEALDHALAGKMSAMAVGRAKYSLLLTEDGGVIDDVITYRLAEDHF 112
Query: 66 ILEIDRSKRDSLIDKLLFYKLRS---NVIIEIQPINGVVLSWNQEHT 109
++ + S + +L + R+ +V ++ +++ +
Sbjct: 113 LVIPNASNAEVDAAEL---RTRAAGFDVEVDDASDRTSLIAVQGPAS 156
>gi|119383267|ref|YP_914323.1| sarcosine oxidase alpha subunit family protein [Paracoccus
denitrificans PD1222]
gi|119373034|gb|ABL68627.1| sarcosine oxidase, alpha subunit family [Paracoccus denitrificans
PD1222]
Length = 977
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 71/254 (27%), Gaps = 51/254 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I V G A +L + T + +LP R I + G ++ + +++ EDT++
Sbjct: 643 STLGKIIVKGPDAGRYLDMMYTGMMSSLPIGKCRYGLICSENGFLIDDGVAARLSEDTWL 702
Query: 67 LEIDRSKRDSLIDKL----------------LFYKLRSNV----------------IIEI 94
+ + + + + V I++
Sbjct: 703 VHTTTGGAERMHGHFEDWLQCEWWDWKVWTANVTEQWAQVAVVGPKARVLLERLGGKIDL 762
Query: 95 QPINGVVLSWNQEHTFS----------------NSSFIDERFSIADVLLHRTWGHNEKIA 138
P + W + + R LH
Sbjct: 763 SPEALPFMGWIEGEIAGIPARVYRISFSGELSFEVAVPANRGLELWEKLHEAGRDLNVTP 822
Query: 139 SDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+ H +R G + + T+ P D M IS K YIG+ R +
Sbjct: 823 YGTEAMHVMRAEKGFIMIGDE-TDGTVIPQDLGMSW--AISKKKADYIGKRAQERSFMTD 879
Query: 199 IIRKRPMIITGTDD 212
R + + + D
Sbjct: 880 PGRWKLVGLESLDG 893
>gi|163793022|ref|ZP_02186998.1| sarcosine oxidase alpha subunit [alpha proteobacterium BAL199]
gi|159181668|gb|EDP66180.1| sarcosine oxidase alpha subunit [alpha proteobacterium BAL199]
Length = 1013
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 2/121 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I V G + FL + + LP AR +L G + S++ + F+
Sbjct: 677 SSLGKIDVQGPDSAEFLNRVYSNGFAALPVGKARYGLMLREDGLVDDDGTTSRLSDTHFL 736
Query: 67 LEIDRSKRDSLIDKLLFY--KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIAD 124
+ ++ L +Y + + + + + + AD
Sbjct: 737 MTTTTVHAAKVLADLEWYLQVVWPELDVRVSSVTEQWAGMALPGPKAREVLAAAVDPGAD 796
Query: 125 V 125
V
Sbjct: 797 V 797
>gi|56696623|ref|YP_166984.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi
DSS-3]
gi|56678360|gb|AAV95026.1| sarcosine oxidase, alpha subunit family [Ruegeria pomeroyi DSS-3]
Length = 977
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 30/80 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A L + T TL R +L G ++ +++ ED
Sbjct: 642 ADVSTLGKIDIQGTDAARLLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTTARLGED 701
Query: 64 TFILEIDRSKRDSLIDKLLF 83
+++ + ++ L F
Sbjct: 702 HYLMTTTTAAAGQVMAHLEF 721
>gi|218662038|ref|ZP_03517968.1| sarcosine oxidase, alpha subunit family protein [Rhizobium etli
IE4771]
Length = 528
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+S I++ GK A FL + L AR +L G I S+ +
Sbjct: 212 LCDVSTLGKIEIFGKDAGTFLDRVYCNGFAKLAVGKARYGIMLREDGFIYDDGTTSRFSD 271
Query: 63 DTFILEIDRSKRDSLIDKLLF 83
+ F + + ++ L F
Sbjct: 272 EHFFMTTTTALAAGVLTHLEF 292
>gi|311897618|dbj|BAJ30026.1| hypothetical protein KSE_42410 [Kitasatospora setae KM-6054]
Length = 342
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 12/110 (10%)
Query: 11 FIKVCGKSAIPFLQAIITADV------LTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
+++ G FL D+ + R + L G L +I +D+
Sbjct: 29 LVRISGGDRYEFL------DLFLAKSSEYVEPDSVREALALNADGTPFAILLHFEIGDDS 82
Query: 65 FILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSS 114
++L + L L ++ +E+ P ++ +S ++
Sbjct: 83 WLLPRTPVTAEELTAYLAAVDAPADATVEVAPEGWGASAFEGPQAWSAAA 132
>gi|213025585|ref|ZP_03340032.1| glycine cleavage system aminomethyltransferase T [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 98
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLY 54
S+ + + + G FL+ ++ DV L A S +L G ++
Sbjct: 50 SHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDD 98
>gi|84999130|ref|XP_954286.1| glycine cleavage complex t-protein [Theileria annulata]
gi|65305284|emb|CAI73609.1| glycine cleavage complex t-protein, putative [Theileria annulata]
Length = 672
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
+TY R+ GI+ P+ D P + H +LM L+ + K G + + R + +
Sbjct: 377 ETYDIARLESGIIRPDLDLTPESTPMHCSLMWNLDINKIRKRIVFGHKHLGRAMVDGVSK 436
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
R +I+ P + + IG + AL +
Sbjct: 437 VRVGLISNKMITPSCTILTSSTRMPIGKITSSAFSPALGM 476
>gi|209550932|ref|YP_002282849.1| sarcosine oxidase subunit alpha family [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536688|gb|ACI56623.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 997
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ +D F
Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|71736006|ref|YP_275145.1| sarcosine oxidase subunit alpha family protein [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71556559|gb|AAZ35770.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320323636|gb|EFW79720.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas
syringae pv. glycinea str. B076]
gi|320328275|gb|EFW84279.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 968
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ +
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNMAGPDSR 748
>gi|15890670|ref|NP_356342.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
gi|15158935|gb|AAK89127.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
Length = 996
Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R +L G I +I ++ ED F
Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWTKLAPGRCRYGLLLGDDGFIRDDGVIGRMTEDRFH 723
Query: 67 LEIDRSKRDSLID 79
+ +++
Sbjct: 724 VTTTTGGAARVLN 736
>gi|330876858|gb|EGH11007.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 968
Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + + G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPIGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759
Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
+ I R + + + ++ +
Sbjct: 760 LSAEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVPARHALRLWDALSEAGKAFDMR 819
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G V + D P + M +S TK ++G+ V ++
Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRSVDILEAL 876
Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250
RK + LP G +L G + + +A A D+
Sbjct: 877 PQKRKLVGFTLPNASPLPLEGHLVLKGADISGNVTSCEYSQNLGMIIGMAYAAFDQSTPG 936
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + GV V+A+
Sbjct: 937 QQIPIRVE-DGVVVQATV 953
>gi|332716790|ref|YP_004444256.1| probable sarcosine oxidase oxidoreductase protein, alpha subunit
[Agrobacterium sp. H13-3]
gi|325063475|gb|ADY67165.1| probable sarcosine oxidase oxidoreductase protein, alpha subunit
[Agrobacterium sp. H13-3]
Length = 986
Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL R + G + ++ ++ ED F
Sbjct: 653 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLSEDRFH 712
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 713 VTTTTGGAPRVLQHMEDY 730
>gi|221213731|ref|ZP_03586705.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1]
gi|221166520|gb|EED98992.1| sarcosine oxidase, alpha subunit [Burkholderia multivorans CGD1]
Length = 998
Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G + + ++ E ++
Sbjct: 665 STLGKIDIQGPDAATLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYL 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ +++ +
Sbjct: 725 MTTTTGGAARVLNWMER 741
>gi|146304426|ref|YP_001191742.1| glycine cleavage system aminomethyltransferase T [Metallosphaera
sedula DSM 5348]
gi|145702676|gb|ABP95818.1| aminomethyltransferase [Metallosphaera sedula DSM 5348]
Length = 347
Score = 37.1 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 58/307 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQ---AIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIE 61
LS+ +++ GK LQ ++ V G +A L + + + K+
Sbjct: 48 LSHMGRLRITGK-----LQEFENLVAKKVSDSSPGTMVGPTAFLNDKAGFVDDVMTYKVS 102
Query: 62 EDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS---------- 111
E F++ + R+ +I+ + S++ +E + V+++ +
Sbjct: 103 ESEFLVVTNAINREKVINWIRK---NSSLEVEDLTFDLVMIALQGRGIWEVAEKPDLSPL 159
Query: 112 ----------NSSFIDERFSIADVLLHRTWGHNEKIASDIKTY-------------HELR 148
+ F+ R W E S ++ LR
Sbjct: 160 QFKLNAKFEGHEVFLLSRSGWTGEDGLEFWAKPEVAQSILERLIARGVKGAGLVARDSLR 219
Query: 149 INHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIIT 208
G V D + P +A + SL K +IG+ + I + R R I
Sbjct: 220 QEMGFVLYGEDIG-EDVNPVEARYWV---YSLDKD-FIGKGALLDILRTGVDRLRIGIKL 274
Query: 209 GTDD--LPPSGSPILTDDIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVH 260
+ +P + S I E+G + + + +
Sbjct: 275 PKNQRVIPRNSSKIKIAGKEVGYVTSSTFSPYLSRVIGMGYLSSRHFLMGGNAEVEVRGK 334
Query: 261 GVRVKAS 267
VK S
Sbjct: 335 DYSVKLS 341
>gi|146308473|ref|YP_001188938.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
mendocina ymp]
gi|145576674|gb|ABP86206.1| glycine cleavage T protein (aminomethyl transferase) [Pseudomonas
mendocina ymp]
Length = 376
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 21/52 (40%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
G A L T D+ L + + +L GK + ++ + + F++
Sbjct: 63 GPHAESLLDYATTRDIGKLYPGKSVYACLLDEDGKFIDDCIVYRTGPNAFMV 114
>gi|294083811|ref|YP_003550568.1| sarcosine oxidase subunit alpha family protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663383|gb|ADE38484.1| sarcosine oxidase, alpha subunit family [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 990
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 63/256 (24%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+++ I + G+ A F+ + LP R +L G ++ +++ E
Sbjct: 652 CDVTSLGKIDIQGRDATTFINRVYANGFAKLPIGKTRYGLMLREDGIVMDDGTTARLAES 711
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA 123
+++ + + L F + D +
Sbjct: 712 HYVMTTTTANAVGVFRHLEF--------------------------CRQCLWPD--LDVQ 743
Query: 124 DVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
+ +W + ++ I+DP D + FP A
Sbjct: 744 LISTTESWAQYAIAGPN-----ARKLLEKIIDPEFDL-SNDAFPFMAC------------ 785
Query: 184 CYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPS-------GSPILTDDIEIGTLGVVV-- 234
G+ V +R R I+ + +L G ++ +E G +V
Sbjct: 786 ---GKVTVC-----GGLRARLFRISFSGELAYELAVPTRYGDALIRRIMEAGEAYDIVPY 837
Query: 235 GKKALAIARIDKVDHA 250
G +AL + RI+K A
Sbjct: 838 GTEALGVMRIEKGHAA 853
>gi|312796400|ref|YP_004029322.1| aminomethyltransferase family protein [Burkholderia rhizoxinica HKI
454]
gi|312168175|emb|CBW75178.1| Aminomethyltransferase family protein [Burkholderia rhizoxinica HKI
454]
Length = 93
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 190 VVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAIARID 245
+V+R Q+R I++R + +G + + G+VV A +D
Sbjct: 1 MVARSQYRGTIKRRT--VLAHTAQAHAGVEVFHSEDPNQPCGMVVNAAAAPEGGVD 54
>gi|254469679|ref|ZP_05083084.1| sarcosine oxidase, alpha subunit family [Pseudovibrio sp. JE062]
gi|211961514|gb|EEA96709.1| sarcosine oxidase, alpha subunit family [Pseudovibrio sp. JE062]
Length = 1000
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S I+V G A F+ + T L R +L G I +I +I +D F
Sbjct: 667 STLGKIEVVGPDAAEFMNRMYTNPWTKLAPGRCRYGLLLGEDGFIRDDGVIGRISQDRF 725
>gi|298712644|emb|CBJ48669.1| Aminomethyltransferase [Ectocarpus siliculosus]
Length = 419
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ I+ GK A F++ + D+ L R + I G I+ +++ D
Sbjct: 94 SHMGQIRWTGKDAADFIERCVVGDIKGLKAGEGRLTLITNANGGIVDDTVVTNAG-DYIY 152
Query: 67 LEIDRSKRDSLIDKLL 82
+ ++ + + +
Sbjct: 153 MVVNGACKHGDMAHFK 168
>gi|294827627|ref|NP_710543.3| glycine cleavage system aminomethyltransferase T [Leptospira
interrogans serovar Lai str. 56601]
gi|293385471|gb|AAN47561.2| glycine cleavage T protein [Leptospira interrogans serovar Lai str.
56601]
Length = 396
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FL++I V +L + +AIL G ++ I K + +++ + S +++ + L
Sbjct: 94 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 153
>gi|28869645|ref|NP_792264.1| sarcosine oxidase subunit alpha [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852887|gb|AAO55959.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 968
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 57/318 (17%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + + G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNS---------- 113
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSRKVLAQVCSDLD 759
Query: 114 ----------------SFIDERFSIADVLLHRTWGHNEKIASDIKTYHE----------- 146
+ I R + + + +K +
Sbjct: 760 LSTEGFPYLGVRQGTVAGIKARLLRVGFVGELGYEIHVAARHALKLWDALSEAGKAFDMR 819
Query: 147 ---------LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR 197
LR+ G V + D P + M +S TK ++G+ V ++
Sbjct: 820 PFGVETQRLLRLEKGHVIISQD-TDGMTHPGEIDMGW--AVSRTKPFFVGRRAVDILEAL 876
Query: 198 NIIRKRP-MIITGTDDLPPSGSPILTDDIEIGTLGVVVGKK------ALAIARIDKVDHA 250
RK + LP G +L G + + +A A D+
Sbjct: 877 PQKRKLVGFTLPKASPLPLEGHLVLKGADISGNVTSCEYSQTLDMIIGMAYAAFDQSTPG 936
Query: 251 IKKGMALTVHGVRVKASF 268
+ + + GV V+A+
Sbjct: 937 QQIPIRVE-DGVVVQATV 953
>gi|45599449|gb|AAS68938.1| glycine cleavage T protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 375
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FL++I V +L + +AIL G ++ I K + +++ + S +++ + L
Sbjct: 73 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 132
>gi|229259641|ref|YP_000301.2| glycine cleavage system aminomethyltransferase T [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|31340143|sp|Q8F935|GCST_LEPIN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|59797810|sp|Q72VI6|GCST_LEPIC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 371
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 22 FLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL 81
FL++I V +L + +AIL G ++ I K + +++ + S +++ + L
Sbjct: 69 FLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHL 128
>gi|289650519|ref|ZP_06481862.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 501
Score = 37.1 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ +
Sbjct: 173 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 232
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 233 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 281
>gi|119184181|ref|XP_001243020.1| hypothetical protein CIMG_06916 [Coccidioides immitis RS]
Length = 1023
Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52
L N++ + + G S+ LQ+++T D+ TL + R L P G ++L
Sbjct: 695 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 753
Query: 53 LYFLISKIEEDTFILEIDRSK 73
+ ED F + I
Sbjct: 754 IS-RTGYTGEDGFEISIPTDH 773
>gi|15890903|ref|NP_356575.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
gi|15159208|gb|AAK89360.1| sarcosine oxidase alpha subunit [Agrobacterium tumefaciens str.
C58]
Length = 986
Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 86/267 (32%), Gaps = 53/267 (19%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL R + G + ++ ++ ED F
Sbjct: 653 STLGKIEVVGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFH 712
Query: 67 LEIDRSKRDSLIDKLLFYK----------LRS----NVIIEIQP--INGVVLSWNQ---- 106
+ ++ + Y L S +I +Q V+ + +
Sbjct: 713 VTTTTGGAPRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDL 772
Query: 107 -EHTFSNSSFIDERFSIADVLLHRT-----WGHNEKIASD-------------------- 140
F + + + +F L R G + +D
Sbjct: 773 SPEAFPHMAVAEGKFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRDRTEAVGGCL 832
Query: 141 --IKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D T+ P DA + +S K ++G + RI
Sbjct: 833 YGTETMHILRAEKGYIIVGQD-TDGTVTPDDAGLAW--AVSKKKTDFVGIRGLKRIDLTR 889
Query: 199 IIRKRPMIITGTDDL--PPSGSPILTD 223
RK+ + + D L P G I+TD
Sbjct: 890 TGRKQLVGLKTKDRLTVPDEGGQIVTD 916
>gi|289624007|ref|ZP_06456961.1| sarcosine oxidase, alpha subunit family protein [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|330868174|gb|EGH02883.1| sarcosine oxidase, subunit alpha family protein [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 968
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + V G A L + T L P +R + + QG ++ + ++ +
Sbjct: 640 IDVSTLGGLDVRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFADQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748
>gi|116672260|ref|YP_833193.1| FAD dependent oxidoreductase [Arthrobacter sp. FB24]
gi|116612369|gb|ABK05093.1| dimethylglycine oxidase [Arthrobacter sp. FB24]
Length = 835
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+ V G A L + T ++ +L G I ++++ E+ F L ++
Sbjct: 517 LAVVGPGAQALLHRLSTGNIAK-KPGAVTYCLLLEHDGGIRSDVTVARLAEEQFQLGVNS 575
Query: 72 SK 73
+
Sbjct: 576 NV 577
>gi|159044658|ref|YP_001533452.1| sarcosine oxidase subunit alpha [Dinoroseobacter shibae DFL 12]
gi|157912418|gb|ABV93851.1| sarcosine oxidase subunit alpha [Dinoroseobacter shibae DFL 12]
Length = 1000
Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 86/290 (29%), Gaps = 59/290 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R +L G I +I ++ +D F
Sbjct: 665 STLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRMRDDLFH 724
Query: 67 LEIDRSKRDSLIDKLLFYKLRS----NVIIEIQPINGVVLSWNQ---------------- 106
+ +++ + Y V + ++ N
Sbjct: 725 VTTTTGGAARVLNMMEDYLQTEWPELKVWLTSTTEEWATIALNGPNARKLLAPFVEGADI 784
Query: 107 -EHTFSNSSFIDE----------RFSIADVLLHRTWGHN-------EKIASDIKTY---- 144
F + S ++ R S L EK+ + Y
Sbjct: 785 SADAFPHMSVVECTVAGFPSRLFRISFTGELGFEINVPARHGKALWEKLWEAGQQYDICP 844
Query: 145 ------HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
H LR G + D T+ P DA + I K ++G+ + R
Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGTVTPQDAGIGW--AIGKAKPDFVGKRSLQRPDIVA 901
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIE------IGTLGVVVGKKALA 240
RK+ + + D + G+ I+ D + IG + + L
Sbjct: 902 PGRKQLVGLLTEDPKTVLAEGAQIVDDPKQAKPMKMIGHVTSSYWSETLG 951
>gi|254480488|ref|ZP_05093735.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214039071|gb|EEB79731.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 805
Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAIL--TPQGKILLYFLISKIEEDTFIL 67
++ G A FL + + LP + R L P G I+ I++I E+ F L
Sbjct: 491 EISGADAHTFLNRLSSN---KLPGRDGRLGLTLFHGPNGGIMTEQSITRINEEQFYL 544
>gi|118795262|ref|XP_322034.3| AGAP001124-PA [Anopheles gambiae str. PEST]
gi|116116686|gb|EAA01036.3| AGAP001124-PA [Anopheles gambiae str. PEST]
Length = 415
Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSK 73
+ GK I ++I TAD+ L + G IL +++++ +D + + S+
Sbjct: 93 LKGKDVISCFESICTADIKGLRNGTGTLTVFTNSSGGILDDLIVNRVADDVLYVVSNASR 152
Query: 74 RD 75
+D
Sbjct: 153 KD 154
>gi|222149771|ref|YP_002550728.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4]
gi|221736753|gb|ACM37716.1| sarcosine oxidase alpha subunit [Agrobacterium vitis S4]
Length = 997
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T +L R + G I ++ ++ ED F
Sbjct: 664 STLGKIEVVGPDAAKFLNLIYTNPWDSLKPGKCRYGIMTRDDGFIYDDGVVGRLAEDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ +++ + Y
Sbjct: 724 VTTTTGGAARVLNHMEDY 741
>gi|16263621|ref|NP_436414.1| aminomethyltransferase [Sinorhizobium meliloti 1021]
gi|14524330|gb|AAK65826.1| aminomethyltransferase [Sinorhizobium meliloti 1021]
Length = 418
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 22/52 (42%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
+ G A + +I D+ L + G ++ L+ +++E+TF
Sbjct: 77 IAGPDAEAMMDRLIPRDIRKLQVGQIYYAPWCDENGYVVGDGLVFRMDENTF 128
>gi|192292739|ref|YP_001993344.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris TIE-1]
gi|192286488|gb|ACF02869.1| glycine cleavage system T protein [Rhodopseudomonas palustris
TIE-1]
Length = 382
Score = 36.7 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 7 SNQSFIKV---CG--KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIE 61
S+ I++ G + A L+A+I D++ LP R + G IL +++ +
Sbjct: 59 SHMGQIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTNLG 118
Query: 62 EDTFILEIDRSKRDSLIDKLL 82
D L ++ + + L
Sbjct: 119 -DRLFLVVNAACKTEDEAHLR 138
>gi|330815072|ref|YP_004358777.1| Glycine cleavage system T protein [Burkholderia gladioli BSR3]
gi|327367465|gb|AEA58821.1| Glycine cleavage system T protein [Burkholderia gladioli BSR3]
Length = 372
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 28/196 (14%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTL-PYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S+ + G+ A F + I +V L A S +L P+G ++ ++ E F
Sbjct: 52 SHMCVVDFRGERARTFFEHAIANNVGKLHTPGKALYSCLLNPEGGVIDDLIVYYFTETFF 111
Query: 66 ILEIDRSKRDSLIDKLLF------YKL-----RSNVIIEIQPINGVVLSWNQEHTF---- 110
++ + I + L R II +Q N +W+
Sbjct: 112 RTVVNAGTAEKDIAWFQRLNEEGGFGLEITPRRELAIIAVQGPNARAKAWDTVPAARAAT 171
Query: 111 ----SNSSFIDERFSIADVLLHRTWGHNEK------IASDIKTYHELRINHGIVDPNTDF 160
++ D+ + RT E AS ++ + I HG+
Sbjct: 172 SELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPASHVQALWDALIAHGVRPAG--L 229
Query: 161 LPSTIFPHDALMDLLN 176
+A M+L
Sbjct: 230 GARDTLRLEAGMNLYG 245
>gi|303320227|ref|XP_003070113.1| glycine cleavage system T protein [Coccidioides posadasii C735
delta SOWgp]
gi|240109799|gb|EER27968.1| glycine cleavage system T protein [Coccidioides posadasii C735
delta SOWgp]
Length = 489
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52
L N++ + + G S+ LQ+++T D+ TL + R L P G ++L
Sbjct: 233 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 291
Query: 53 LYFLISKIEEDTFILEIDRSK 73
+ ED F + I
Sbjct: 292 IS-RTGYTGEDGFEISIPTDH 311
>gi|224826914|ref|ZP_03700013.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002]
gi|224600901|gb|EEG07085.1| sarcosine oxidase, alpha subunit family [Lutiella nitroferrum 2002]
Length = 998
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 26/77 (33%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G + + +++ E F+
Sbjct: 665 STLGKIDIQGPDATTLLNWLYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTTRLAEHHFL 724
Query: 67 LEIDRSKRDSLIDKLLF 83
+ +++ +
Sbjct: 725 MTTTTGGAARVLNWMER 741
>gi|320031962|gb|EFW13919.1| glycine cleavage system T protein [Coccidioides posadasii str.
Silveira]
Length = 489
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 15/81 (18%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52
L N++ + + G S+ LQ+++T D+ TL + R L P G ++L
Sbjct: 233 LDNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQ-LHLDFPDGSHTPARLL 291
Query: 53 LYFLISKIEEDTFILEIDRSK 73
+ ED F + I
Sbjct: 292 IS-RTGYTGEDGFEISIPTDH 311
>gi|319441636|ref|ZP_07990792.1| glycine cleavage system T protein (aminomethyltransferase)
[Corynebacterium variabile DSM 44702]
Length = 873
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 52/281 (18%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYK--IARGSAILTPQGKILLYFLISK 59
+ +++ + I V G A FL+ + + + S +L G +L +++
Sbjct: 547 ALYDMTSLTRILVRGAGATEFLEEQCSNLIDKPVGRTLPVVYSLLLDEAGGVLSDVTVTR 606
Query: 60 IEEDTFILEIDRSKRDSLIDKLLFYKL-RSNVII-EIQPINGVVLSWNQ----------E 107
+ ++ ++L ++ + + +L + R V + +I + W E
Sbjct: 607 LGDEEYMLGVNGA---MDVTRLTTRAVGRGAVTVDDITTSTCCLGLWGPRARDILTPLVE 663
Query: 108 HTFSNSSF---------------IDERFSIADVLLHRTWGHNEK---------------- 136
SN + +R S L +
Sbjct: 664 GDISNDGLKYFRGQKMFIAGVPVLIQRVSYVGDLGWEIYTPAAHGLRLWDAVSAAGAVHG 723
Query: 137 -IASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRI 194
+ + ++ LR G V D P DA +D + G + GQ+ ++
Sbjct: 724 LVPAGRLAFNSLRTEKGYVSWGADVTRENT-PADAGLDFAVKGADRKPTPFTGQDALAEQ 782
Query: 195 QHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG 235
R + + P +GSP+ D G G
Sbjct: 783 PSRGMSL-VTFVARLDAGTPEAGSPVRVGDATGWVTGADSG 822
>gi|332717055|ref|YP_004444521.1| sarcosine oxidase alpha subunit [Agrobacterium sp. H13-3]
gi|325063740|gb|ADY67430.1| sarcosine oxidase alpha subunit [Agrobacterium sp. H13-3]
Length = 996
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
S I+V G A+ F+ + T L R +L G I +I ++ ED F
Sbjct: 664 STLGKIEVVGPDAVEFMNRMYTNPWSKLAPGRCRYGLLLGDDGFIRDDGVIGRMTEDRF 722
>gi|331019496|gb|EGH99552.1| sarcosine oxidase, alpha subunit [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 805
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 43/109 (39%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+ +S + + G A L + T L P +R + + QG ++ + ++ E
Sbjct: 640 IDVSTLGGLDIRGPDAAELLNRMYTFAFLKQPVGRSRYALMTNEQGVVIDDGVCARFAEQ 699
Query: 64 TFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSN 112
F + S D + ++L + + + ++I + + + N S
Sbjct: 700 HFYVTATTSGVDRIYQQMLKWNAQWRLNVDITNVTAAIAAVNVAGPDSR 748
>gi|259416964|ref|ZP_05740884.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B]
gi|259348403|gb|EEW60180.1| sarcosine oxidase subunit alpha [Silicibacter sp. TrichCH4B]
Length = 981
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A L + T TL R +L G ++ +++ E+
Sbjct: 646 CDVSTLGKIDIQGPDAAKLLDLVYTNLFSTLKLGRVRYGLMLREDGFVMDDGTTARLGEN 705
Query: 64 TFILEIDRSKRDSLIDKL 81
+++ + ++ L
Sbjct: 706 HYVMTTTTAAAGQVMAHL 723
>gi|313619089|gb|EFR90893.1| aminomethyltransferase [Listeria innocua FSL S4-378]
Length = 107
Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 185 YIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKA 238
+IG++ + + + + RK I +P P+ +D EIG +
Sbjct: 10 FIGKQALIKQKEAGLTRKLVGIELIERGIPRHDYPVFLNDKEIGVITSGTQSPTLGTNIG 69
Query: 239 LAIARIDKVDHAIKKGMALTVHGVRVKASF 268
LA+ ID + + + + + +VKA
Sbjct: 70 LAL--IDTAYTELDQELEVGIRNKKVKAKV 97
>gi|218680811|ref|ZP_03528708.1| glycine cleavage T protein (aminomethyl transferase) [Rhizobium
etli CIAT 894]
Length = 289
Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 26/56 (46%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + G AI L I T D+ + + +A+L +G ++ + ++++L
Sbjct: 59 VHLVGPHAIAVLDYITTRDMTKIYPGRSVYAAMLNDRGHFTDDCIVYRTGPNSWML 114
>gi|104780577|ref|YP_607075.1| glycosidase [Pseudomonas entomophila L48]
gi|95109564|emb|CAK14265.1| putative glycosidase, family 5 [Pseudomonas entomophila L48]
Length = 392
Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 19/132 (14%)
Query: 29 ADVLTLPYKIARGSAILTPQG------KILLY--------FLISKIEEDTFILEIDRSKR 74
LP A A+ +G ++ FL+ ++ ++E D +
Sbjct: 34 NSFNRLPPDQAYFDAL---KGYGASWVRLSYDKWRPARRDFLLGDADDYQGLVEADLKQL 90
Query: 75 DSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHN 134
+++D+ L V+I + G+ + N F + + D+RF R
Sbjct: 91 VAVLDRAHAAGL--KVVITPLSLPGMRWAQNNHGQFDDRLWQDKRFWEQSARFWRDLARA 148
Query: 135 EKIASDIKTYHE 146
K I Y+
Sbjct: 149 LKDHPAIAAYNL 160
>gi|300780790|ref|ZP_07090644.1| aminomethyltransferase [Corynebacterium genitalium ATCC 33030]
gi|300532497|gb|EFK53558.1| aminomethyltransferase [Corynebacterium genitalium ATCC 33030]
Length = 362
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 38/106 (35%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
LS+ I V G A +L ++ + + L A+ S I+ G I+ + K +D F
Sbjct: 48 LSHMGEIDVKGPDAGAYLDYVLISSLSALKVGKAKYSMIVNDDGGIIDDLITYKFADDHF 107
Query: 66 ILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFS 111
++ + ++ +V I +++
Sbjct: 108 MVVPNAGNTGAVWAAFEARVGDFDVEIRNDSEAVALVAVQGPRALE 153
>gi|119477616|ref|ZP_01617766.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2143]
gi|119449119|gb|EAW30359.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2143]
Length = 373
Score = 36.7 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 35/77 (45%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ GK L+ ++ D+ +LP + + I+ +I++ +D F
Sbjct: 53 SHMGQLRIKGKGITEALEKLVPVDLASLPLLKQTYAVFTNNEAGIIDDLIITRWADDEFF 112
Query: 67 LEIDRSKRDSLIDKLLF 83
L ++ + + ID L
Sbjct: 113 LVVNAGCKLNDIDHLQK 129
>gi|254452949|ref|ZP_05066386.1| dimethylglycine dehydrogenase [Octadecabacter antarcticus 238]
gi|198267355|gb|EDY91625.1| dimethylglycine dehydrogenase [Octadecabacter antarcticus 238]
Length = 796
Score = 36.3 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
L N ++ G A +L I+ + + + +L+ +GK+L F +S + +D F
Sbjct: 484 LHNFGKYRITGPKARDWLNRIMAGRIPKI--GRLALTPMLSHKGKLLGDFTVSCLADDKF 541
Query: 66 IL 67
L
Sbjct: 542 HL 543
>gi|254513145|ref|ZP_05125211.1| dimethylglycine dehydrogenase [Rhodobacteraceae bacterium KLH11]
gi|221533144|gb|EEE36139.1| dimethylglycine dehydrogenase [Rhodobacteraceae bacterium KLH11]
Length = 809
Score = 36.3 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A +L ++ + L S +L +G + + I + +D F L
Sbjct: 498 TVRGPGAAQWLDGLMANKLPKL--GRMTLSLMLNDKGGMDAEYTIVRKAQDDFYL 550
>gi|227495818|ref|ZP_03926129.1| glycine cleavage system aminomethyltransferase T [Actinomyces
urogenitalis DSM 15434]
gi|226834640|gb|EEH67023.1| glycine cleavage system aminomethyltransferase T [Actinomyces
urogenitalis DSM 15434]
Length = 422
Score = 36.3 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 88/275 (32%), Gaps = 49/275 (17%)
Query: 10 SFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEI 69
+ I V G A L+ ++T +A+ E+ +
Sbjct: 153 ALIAVQGPRAEEVLRGVVT-------SGAGIQAAL---------------RPEEPADEDC 190
Query: 70 DRSKR--DSLIDKLLFY-KLRS-----NVIIE---IQPINGVVLSWNQEHTFSNSSFIDE 118
+++ +L +Y +R+ +V++ +G L E S I +
Sbjct: 191 GADVLCGPTILRRLRYYAAVRATAAGHSVLLARTGYTGEDGFELFCEAEAAEDLWSVITD 250
Query: 119 RFSIADVLLHRTWGH--NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLN 176
+ G + LR+ G+ + I P DA + +
Sbjct: 251 HAATLAPTPAAQEGETLAALTPCGLAARDSLRLEAGMPLYGHELT-EEITPFDASLGAV- 308
Query: 177 GISLTKGCYIG-QEVVSRIQHRNII-RKRPMIITGTDDLPP-SGSPIL-TDDIEIGTLGV 232
+ L K ++G Q + +R + K + + G +G +L +D IG++
Sbjct: 309 -VKLAKSEFVGRQALAARAEREGQPGTKVLVALAGEGRRAARAGCTVLGSDGQAIGSVTS 367
Query: 233 VV------GKKALAIARIDKVDH-AIKKGMALTVH 260
+ ALA+ ++ A G L V
Sbjct: 368 GLLSPTLGHPIALALVAPASLEEPAWAPGTELAVD 402
>gi|255262503|ref|ZP_05341845.1| dimethylglycine dehydrogenase [Thalassiobium sp. R2A62]
gi|255104838|gb|EET47512.1| dimethylglycine dehydrogenase [Thalassiobium sp. R2A62]
Length = 801
Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+V G A +L I+ + S +L+P+G++L F IS + +D F L
Sbjct: 491 EVHGPGARDWLDRIMAGRIPK--PGRLSLSPMLSPKGRLLGDFTISCLADDQFQL 543
>gi|149201556|ref|ZP_01878530.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
gi|149144604|gb|EDM32633.1| glycine cleavage T protein (aminomethyl transferase) [Roseovarius
sp. TM1035]
Length = 370
Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 98/308 (31%), Gaps = 65/308 (21%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
+++ G A +Q + D+ + I+ G +L + K+ ED + + I
Sbjct: 66 VELRGPDAGRLMQMLTPRDLRGMTPGQCFYVPIVDETGGMLNDPVAVKLAEDRWWISIAD 125
Query: 72 SKRDSLIDKLLFYKL--RSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----------- 118
S L+ + R +V+++ ++ + + + + F D
Sbjct: 126 S---DLLYWVKGIAQGWRLDVLVDEPEVSPLAIQGPRADDLMAAVFGDAVRDVRFFRFGH 182
Query: 119 -RFSIADVLLHRTWGHNEKIAS--------DIKTYHEL------------------RINH 151
F D+++ R+ + + ++ L RI
Sbjct: 183 FDFQGRDMVIARSGYSKQGGFEIYVEGGDIGMPLWNALMEAGKSMDVHAGCPNLIERIEG 242
Query: 152 GIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTD 211
G++ D PH+ + GC IG++ + R+ +++ I
Sbjct: 243 GLLSYGNDMTDDNT-PHECGLGKFCNTHTAIGC-IGRDALLRVAKEGPVQQIRAIAIEGT 300
Query: 212 DLPPSGS--PILTD-DIEIGTLGVV------VGKKALAIARIDKVDHAIKKGMALTVHGV 262
+PP P+L++ +G + A+ + R+ + G
Sbjct: 301 AVPPCREWWPVLSEKGARVGRVSSATWSPDFATNVAIGMMRMTHWEA-----------GT 349
Query: 263 RVKASFPH 270
++ P
Sbjct: 350 ELRVVTPD 357
>gi|170748903|ref|YP_001755163.1| sarcosine oxidase alpha subunit family protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655425|gb|ACB24480.1| sarcosine oxidase, alpha subunit family [Methylobacterium
radiotolerans JCM 2831]
Length = 995
Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A F+ + L R +L G IL +++++ + F
Sbjct: 662 STLGKIEIVGPDAAEFMNRLYINPWAKLEPGRCRYGLMLKEDGYILDDGVVARVSPECFH 721
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 722 VTTTTGGAARVLAHMEDY 739
>gi|70607139|ref|YP_256009.1| glycine cleavage system aminomethyltransferase T [Sulfolobus
acidocaldarius DSM 639]
gi|68567787|gb|AAY80716.1| aminomethyltransferase [Sulfolobus acidocaldarius DSM 639]
Length = 351
Score = 36.3 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 7 SNQSFIKVCGKSAI-PFLQAIITADVLTLPYKIARG-SAILTPQGKILLYFLISKIEEDT 64
S+ +KV G FL ++ ++ G +A L +G +I K+ E+
Sbjct: 49 SHMGRLKVSGNQNELEFL---VSKEISKNKPNSMIGPTAFLNDKGGFEDDVMIYKVSENE 105
Query: 65 FILEIDRSKRDSLIDKLLF 83
F++ + R+ +I+ +
Sbjct: 106 FLIVTNAINREKIINWIGK 124
>gi|327289405|ref|XP_003229415.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like [Anolis carolinensis]
Length = 879
Score = 36.3 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I G+ A+ LQ + + D+ +P + +L G I ++ + +F +
Sbjct: 534 ISSTGEQALDVLQYLFSNDLD-VPVGHIVHTGMLNHSGGYENDCSIVRVNKRSFFMISPT 592
Query: 72 SK 73
+
Sbjct: 593 DQ 594
>gi|146341852|ref|YP_001206900.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. ORS278]
gi|146194658|emb|CAL78683.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS278]
Length = 385
Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ D++ + R + G IL +++ E +L ++ + +++
Sbjct: 77 ADAAAALERLVPQDIVGMSAGRQRYAQFTNADGGILDDLMVANFGE-HLVLVVNAACKEA 135
Query: 77 LIDKLL 82
I L
Sbjct: 136 DIQLLR 141
>gi|121605577|ref|YP_982906.1| glycine cleavage system T protein [Polaromonas naphthalenivorans
CJ2]
gi|120594546|gb|ABM37985.1| glycine cleavage system T protein [Polaromonas naphthalenivorans
CJ2]
Length = 384
Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLIS---KIEED 63
S+ +++ G A ++++ DV+ L R +L +G I+ +
Sbjct: 61 SHMGQLRLVGPDAAAAFESLMPVDVIDLAPGRQRYGLLLNDEGGIIDDLMFFNRDHANGG 120
Query: 64 TFILEIDRSKRDSLIDKLL 82
+ ++ + + I +
Sbjct: 121 DIFVIVNGACKAGDIAHIQ 139
>gi|260429827|ref|ZP_05783803.1| sarcosine oxidase subunit alpha [Citreicella sp. SE45]
gi|260419310|gb|EEX12564.1| sarcosine oxidase subunit alpha [Citreicella sp. SE45]
Length = 979
Score = 36.3 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 27/73 (36%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A+ F+ + T L R + G I +I ++ +D F
Sbjct: 647 STLGKIEVVGPDAVEFMNRMYTNPWTKLGVGRCRYGLLCGDDGFIRDDGVIGRMGQDRFH 706
Query: 67 LEIDRSKRDSLID 79
+ +++
Sbjct: 707 VTTTTGGAARVLN 719
>gi|254461146|ref|ZP_05074562.1| sarcosine oxidase, alpha subunit family [Rhodobacterales bacterium
HTCC2083]
gi|206677735|gb|EDZ42222.1| sarcosine oxidase, alpha subunit family [Rhodobacteraceae bacterium
HTCC2083]
Length = 979
Score = 36.3 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 9/118 (7%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDR 71
I V G A FL + + R +L G + +++ ED F++
Sbjct: 649 IDVQGADAATFLNKVYCNPFAKVAVGKTRYGLMLREDGIAMDDGTAARLAEDHFVVTTTT 708
Query: 72 SKRDSLIDKLLFYKLR------SNVI-IEIQPINGVVLSWNQEHTFSNSSFIDERFSI 122
+K + + F +R ++V I +D F I
Sbjct: 709 AKAGPVYQHMEF--VRQCLMPDADVQLISTTEAWAQFAVAGPNSRALLQKIVDPEFDI 764
>gi|71032717|ref|XP_766000.1| aminomethyltransferase [Theileria parva strain Muguga]
gi|68352957|gb|EAN33717.1| aminomethyltransferase, putative [Theileria parva]
Length = 418
Score = 36.3 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%)
Query: 142 KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIR 201
TY R+ GI+ P+ D P + H +LM L+ + K G + + R + +
Sbjct: 111 DTYDIARLETGIIRPDLDLTPESTPMHCSLMWNLDIHKIRKRIIFGHKHLGRAMVDGVSK 170
Query: 202 KRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGKKALAI 241
R +I+ P + + IG + + AL +
Sbjct: 171 VRVGLISNKMITPSCTILTSSTRMPIGKITSSIFSPALGM 210
>gi|307941647|ref|ZP_07657002.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4]
gi|307775255|gb|EFO34461.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4]
Length = 383
Score = 36.3 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 55/306 (17%)
Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66
+ G L+A+ ++++ L R + +L G I+ ++++ +
Sbjct: 66 LIGPDHETTARALEALCPSNMVELKPGRQRYTVLLNEDGGIVDDLMVTRPLAAERDGQLF 125
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIE---------IQPINGVVLSWNQEHTFSNSSFID 117
+ ++ S++D LL KL NV +E +Q V + + + F+D
Sbjct: 126 IVVNASRKDVDYA-LLRDKLPDNVRLELVEDRALIALQGPEAVAVVASHAPAAAELGFMD 184
Query: 118 ERFSIADVL---------------------------LHRTWGHNEKIASDIKTYHELRIN 150
F D + + LR+
Sbjct: 185 ADFMELDGIDCHISRSGYTGEDGVEMSVPAGAAEAIAKALLADERVKPIGLGARDSLRME 244
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D T P + + + +G + G + + R R
Sbjct: 245 AGLCLYGHDL-DETTSPVEGSITFAMQKRRREEGGFPGAAHIQKELAEGPSRVRVGFKLD 303
Query: 210 TDDLPPSGSPI-LTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262
G+ I L D IGT+ G A +A+ +D + + L V
Sbjct: 304 GKAPAREGAEIRLPDGTVIGTVTS--GGFAPTMGAPIAMGYVDAAHSELGTKVNLVVRNR 361
Query: 263 RVKASF 268
+ A
Sbjct: 362 ELPAQV 367
>gi|326316924|ref|YP_004234596.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373760|gb|ADX46029.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 378
Score = 36.3 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G A + ++ DV+ L R +L G I+ + +D F+
Sbjct: 59 SHMGQLRLVGADAAAAFETLVPVDVIGLGVGKQRYGLLLNDAGGIIDDLMFVNRGDDLFV 118
Query: 67 L 67
+
Sbjct: 119 I 119
>gi|255018534|ref|ZP_05290660.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL F2-515]
Length = 127
Score = 36.3 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGC-YIGQEVVSRIQHRNIIRKR 203
LR+ + + I P +A ++ + L K +IG+E + + + +IRK
Sbjct: 9 DTLRLEAVLALYGQEL-SKDITPLEAGLNF--AVKLKKEADFIGKEALIKQKEAGLIRKL 65
Query: 204 PMIITGTDDLPPSGSPILTDDIEIGTLGVVVG------KKALAIA 242
I +P P+ ++ +IG + LA+
Sbjct: 66 VGIELIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLALI 110
>gi|220923309|ref|YP_002498611.1| sarcosine oxidase subunit alpha family protein [Methylobacterium
nodulans ORS 2060]
gi|219947916|gb|ACL58308.1| sarcosine oxidase, alpha subunit family [Methylobacterium nodulans
ORS 2060]
Length = 995
Score = 35.9 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I++ G A F+ + L L R +L G IL +++++ +D F
Sbjct: 662 STLGKIEIVGPDAAEFMNRMYVNPWLKLEPGRCRYGLMLKEDGYILDDGVVARVSKDCFH 721
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 722 VTTTTGGAPRVLAHMEDY 739
>gi|154246144|ref|YP_001417102.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2]
gi|154160229|gb|ABS67445.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2]
Length = 381
Score = 35.9 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 47/287 (16%), Positives = 90/287 (31%), Gaps = 51/287 (17%)
Query: 29 ADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFILEIDRSKRDSLIDKLLFY 84
AD L L R S +L G I+ F++++ + T IL ++ + + + +
Sbjct: 81 ADFLNLAPGRQRYSQLLAEDGGIIDDFMVTRPLAPEADGTLILVVNAACKAGDFAHIAAH 140
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTF------SNSSFID----------------ERFSI 122
L V + +P ++ E ++ +D R
Sbjct: 141 -LPEGVALVERPERALLALQGPEAAAVMARHCPEAATLDFMAAIPTEFDGIPVEVSRSGY 199
Query: 123 ADVLLHRTWGHNEKI--------------ASDIKTYHELRINHGIVDPNTDFLPSTIFPH 168
NE A + LR+ G+ D ST P
Sbjct: 200 TGEDGFEISVENESAPLLWAALLAEPEVKAIGLGARDSLRLEAGLCLYGHDIDLSTS-PI 258
Query: 169 DALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDIEI 227
+A ++ + T+G + G + R + R R + G+ I +D +
Sbjct: 259 EAALNWSIQKRRRTEGGFPGDARIQRELAQGPARVRVGLRLEGRAPAREGAEIASDGAVV 318
Query: 228 GTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGVRVKASF 268
G + G A +A+ + A + + V G + A+
Sbjct: 319 GRVTS--GGFAPTLGAPIAMGYVPPALSAPGTRLDVLVRGKALAATV 363
>gi|148240793|ref|YP_001226180.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
WH 7803]
gi|166221574|sp|A5GPL8|GCST_SYNPW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|147849332|emb|CAK24883.1| Glycine cleavage system T protein [Synechococcus sp. WH 7803]
Length = 369
Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
S+ +++ G + LQ ++ D+ + A S +L G I ++ + +
Sbjct: 51 SHMGVLRIEGSNPKDALQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLIVYDLGQ 106
>gi|86608619|ref|YP_477381.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557161|gb|ABD02118.1| glycine cleavage system T protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 374
Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDT 64
S+ + G L ++ +D+ +P R + +L P G IL + + +
Sbjct: 54 SHMGKFTLWGPELGSHLSRLVPSDLSAVPVGSGRYTVLLNPLGGILDDVIFYRHPPEG 111
>gi|325962227|ref|YP_004240133.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468314|gb|ADX71999.1| aminomethyltransferase [Arthrobacter phenanthrenivorans Sphe3]
Length = 382
Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 16/75 (21%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITAD------VLTLPYKIARGSAILTPQGKILLYFLISK 59
LS+ + V G A FL D + + A+ S I G I+ + +
Sbjct: 50 LSHMGEVWVTGPDAAAFL------DYALVGKISAMAVGKAKYSLICNEDGGIIDDLITYR 103
Query: 60 I----EEDTFILEID 70
+ + L +
Sbjct: 104 RPAAEDGNDVFLVVP 118
>gi|319783098|ref|YP_004142574.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168986|gb|ADV12524.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 811
Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 13 KVCGKSAIPFLQAIITADVLTLP-YKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+V G A +L I+ LP + LTP G + +++++++ D F L
Sbjct: 497 EVGGPGAEGWLDGILAN---RLPRPGRVALAHHLTPTGGVQAEYVVARLQSDLFYL 549
>gi|315647598|ref|ZP_07900700.1| glycine cleavage system T protein [Paenibacillus vortex V453]
gi|315277037|gb|EFU40378.1| glycine cleavage system T protein [Paenibacillus vortex V453]
Length = 109
Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 178 ISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPIL-TDDIEIGTLGVVVG- 235
+ L G +IG+E + + ++ + RK I +P S P+ ++ IG +
Sbjct: 1 MKLDSGDFIGREALQQQKNAGVPRKLVGIELIDRGIPRSHYPVFNSEGEPIGEVTSGTQS 60
Query: 236 ---KKALAIARIDKVDHAIKKGMALTVHGVRVKASF 268
K+ L +A I+ ++ + + + G ++KA
Sbjct: 61 PTLKRNLGLALIETAYTSLDSEVWVEIRGKKLKAKV 96
>gi|163747455|ref|ZP_02154807.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus
indolifex HEL-45]
gi|161379308|gb|EDQ03725.1| sarcosine oxidase, alpha subunit family protein [Oceanibulbus
indolifex HEL-45]
Length = 978
Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 28/80 (35%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A L + T TL R ++ G ++ +++ E
Sbjct: 643 CDVSTLGKIDIQGADAAKLLDLVYTNTFNTLKVGKVRYGLMMREDGFVMDDGTCARLGEQ 702
Query: 64 TFILEIDRSKRDSLIDKLLF 83
F++ ++ L F
Sbjct: 703 HFLMTTTTGAAGQVMRHLEF 722
>gi|260432666|ref|ZP_05786637.1| FAD dependent oxidoreductase/aminomethyl transferase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416494|gb|EEX09753.1| FAD dependent oxidoreductase/aminomethyl transferase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 811
Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 15/186 (8%)
Query: 90 VIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRI 149
V I + GV S + + A + L + + +R+
Sbjct: 619 VGIAPATVMGVSFSGELAY---EIHVPNASLYAAYLALRQAGQAFGLQLFGARAVESMRM 675
Query: 150 NHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRP-MIIT 208
+ D + P + + + L K +IG+ + Q + RK + +
Sbjct: 676 EKTFLHWKADLITE-FDPFETGLHRF--VRLDKPQFIGRAALIERQAKGPSRKLVALQVQ 732
Query: 209 GTDDLPPSGSPILTDDIEIGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHGV 262
T G+ ++ +D +GT+ G LA A ++ A M L + G
Sbjct: 733 ATHAPAHPGASLMAEDRVVGTVTS--GDWGHRTGLNLAHAFVEPHLSAEGSEMMLDLCGD 790
Query: 263 RVKASF 268
RV A
Sbjct: 791 RVPARV 796
>gi|222106586|ref|YP_002547377.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
gi|221737765|gb|ACM38661.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
Length = 472
Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 14 VCGKSAIPFL--QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A FL I A+ +TP G ++ +I + +D FIL
Sbjct: 65 VEGPDAEKFLSHHGI--NSFANFDLNRAKHFVSVTPNGHVIGDHIIFRERQDKFIL 118
>gi|254472053|ref|ZP_05085454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062]
gi|211959255|gb|EEA94454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062]
Length = 380
Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 89/309 (28%), Gaps = 56/309 (18%)
Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66
+ G L+ ++ +++ L R + +L G I+ ++S+ ++ +
Sbjct: 63 LVGPDHATTAAALETLVPSNMKELKPGKQRYTVLLNDNGCIIDDLMVSRPLAAEDDGRLM 122
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHT----------------- 109
L ++ + +D+ ++ L NV +EI ++ +
Sbjct: 123 LVVNAACKDNDYK-IIAAALPDNVKLEIVEDRALIAIQGPKAAEVMALHAPEAAEMGFME 181
Query: 110 -----FSNSSFIDERFSIADVLLHR--------------TWGHNEKIASDIKTYHELRIN 150
F S I R + + LR+
Sbjct: 182 ARPLEFDGISVIASRSGYTGEDGYEISIPAGAAEAVAKALLADERVEPIGLGARDSLRLE 241
Query: 151 HGIVDPNTDFLPSTIFPHDALMDL-LNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITG 209
G+ D +T P + + + G + G E V + R ++
Sbjct: 242 AGLCLYGHDIDENTT-PVEGNITFCMQKRRKEAGDFPGGERVLKQLAEGTENLRVGLLLD 300
Query: 210 TDDLPPSGSPILTDDIE--IGTLGVVVGKKA------LAIARIDKVDHAIKKGMALTVHG 261
G+ I E IG + G +A+ + I + L V G
Sbjct: 301 GRAPAREGAEIRVPGSEEVIGRVTS--GGFGPTLGAPVAMGYVPSKLAEIGTEVELVVRG 358
Query: 262 VRVKASFPH 270
+KA
Sbjct: 359 RALKAKVAE 367
>gi|258568996|ref|XP_002585242.1| glycine cleavage system T protein [Uncinocarpus reesii 1704]
gi|237906688|gb|EEP81089.1| glycine cleavage system T protein [Uncinocarpus reesii 1704]
Length = 391
Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 15/89 (16%)
Query: 6 LSNQSFIKVCGKSAIPFLQAIITA-------DVLTLPYKIARGSAILT-PQG-----KIL 52
L N++ + + G S+ LQA++T D+ TL + R L+ P G ++L
Sbjct: 135 LDNRALLALQGPSSAAVLQALVTQGEASVESDLSTLHFGQCRQ-LHLSFPDGSHTPARLL 193
Query: 53 LYFLISKIEEDTFILEIDRSKRDSLIDKL 81
+ ED F + I + L ++
Sbjct: 194 IS-RTGYTGEDGFEISIPTEQDAQLPRRI 221
>gi|195456896|ref|XP_002075335.1| GK15723 [Drosophila willistoni]
gi|194171420|gb|EDW86321.1| GK15723 [Drosophila willistoni]
Length = 969
Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 587 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 645
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 646 RSMCWIRKHMPAHLRAKVNVAD 667
>gi|323456399|gb|EGB12266.1| hypothetical protein AURANDRAFT_20469 [Aureococcus anophagefferens]
Length = 414
Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 2 SSVYLSNQSFIKVCGKSAIPFLQAI--------ITA---DVLTLPYKIARGSAILTPQGK 50
S +S+ IK G FL+ + TA DV L R + + +G
Sbjct: 70 SLFDVSHMGQIKWTGADRAKFLERVRPRPASRAATAVVGDVAGLGDGEGRLTLLTNAEGG 129
Query: 51 ILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82
IL +++ D + ++ + + + L
Sbjct: 130 ILDDCVLANAG-DYVYMVVNGACKVGDMAHLQ 160
>gi|221484514|gb|EEE22808.1| aminomethyltransferase, putative [Toxoplasma gondii GT1]
Length = 1658
Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61
+ G+ + L +++ D+ + A+ + +L +G +L ++K+
Sbjct: 1200 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1253
>gi|118590749|ref|ZP_01548150.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614]
gi|118436725|gb|EAV43365.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614]
Length = 383
Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 14 VCGKS---AIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKI----EEDTFI 66
+ G L+A+ ++ + L + R + +L +G I+ ++++ E+ +
Sbjct: 66 LIGPDHETTARALEALTPSNFVELGHGRQRYTVLLNDEGGIIDDLMVTRPLSEDEDGKLM 125
Query: 67 LEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE 107
L ++ S++D L +L NV +E+ ++ E
Sbjct: 126 LVVNASRKDVDYAHL-RERLPDNVTLEVIEDRALIAVQGPE 165
>gi|89054979|ref|YP_510430.1| FAD dependent oxidoreductase [Jannaschia sp. CCS1]
gi|88864528|gb|ABD55405.1| dimethylglycine dehydrogenase [Jannaschia sp. CCS1]
Length = 806
Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G A +L ++ + + +L+P+G+I+ F ++ + E+ F+L
Sbjct: 492 VQGPGARAWLDRVLAGRIPK--PGRLSLTPMLSPKGRIIGDFTVTCLSEEHFLL 543
>gi|134287792|ref|YP_001109958.1| sarcosine oxidase alpha subunit family protein [Burkholderia
vietnamiensis G4]
gi|134132442|gb|ABO60177.1| sarcosine oxidase, alpha subunit family [Burkholderia vietnamiensis
G4]
Length = 998
Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 55/272 (20%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I + G A L + T L R +L G + + ++ E ++
Sbjct: 665 STLGKIDIQGPDAATLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLGEQHYV 724
Query: 67 LEIDRSKRDSLIDKLLF----------------------YKL----RSNVIIEIQ-PING 99
+ +++ + + + V+ +I I+
Sbjct: 725 MTTTTGGAARVLNWMERWLQTEWPNLNVHLTSVTDHWATFAVVGPKSRKVLQKICKDIDF 784
Query: 100 VVLSWN----QEHTFSNSSFIDERFSIADVL----------LHRTWGHNEKIASDI---- 141
++ +E T + R S + L W +D
Sbjct: 785 ANGAFPFMTYREGTVAGVPARVMRISFSGELAYEVNVPANFGRGVWEALMAAGADFDITP 844
Query: 142 ---KTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRN 198
+T H LR G + D +I P D M G+ K C +G+ +SR
Sbjct: 845 YGTETMHVLRAEKGYIIVGQD-TDGSITPFDLGM---GGMVAKKDC-LGKRSLSRTDTAK 899
Query: 199 IIRKRPMIITGTDD--LPPSGSPILTDDIEIG 228
RK+ + + D + G+ I+ G
Sbjct: 900 AGRKQFVGLRSIDPRVVLTEGAQIVPTPTPQG 931
>gi|294633939|ref|ZP_06712496.1| aminomethyltransferase [Streptomyces sp. e14]
gi|292830191|gb|EFF88543.1| aminomethyltransferase [Streptomyces sp. e14]
Length = 448
Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 14 VCGKSAIPFL--QAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ G A L T D A+ +T GKI+ ++++ ED ++L
Sbjct: 65 IEGPDATRVLAEHG--TNDFEKFAIGQAKQYVPVTRDGKIVTDGILARHAEDKYLL 118
>gi|241206344|ref|YP_002977440.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860234|gb|ACS57901.1| sarcosine oxidase, alpha subunit family [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 997
Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ +D F
Sbjct: 664 STLGKIEVVGPDAAEFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|116253860|ref|YP_769698.1| sarcosine oxidase alpha subunit [Rhizobium leguminosarum bv. viciae
3841]
gi|115258508|emb|CAK09612.1| putative sarcosine oxidase alpha subunit [Rhizobium leguminosarum
bv. viciae 3841]
Length = 997
Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S I+V G A FL I T TL AR + G + ++ ++ +D F
Sbjct: 664 STLGKIEVVGPDAAEFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADDRFH 723
Query: 67 LEIDRSKRDSLIDKLLFY 84
+ ++ + Y
Sbjct: 724 VTTTTGGAPRVLHHMEDY 741
>gi|195477143|ref|XP_002100107.1| GE16342 [Drosophila yakuba]
gi|194187631|gb|EDX01215.1| GE16342 [Drosophila yakuba]
Length = 938
Score = 35.6 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E F++ ++
Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHFMMIAPTIQQT 628
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650
>gi|159045222|ref|YP_001534016.1| aminomethyltransferase, glycine cleavage system T protein
[Dinoroseobacter shibae DFL 12]
gi|157912982|gb|ABV94415.1| aminomethyltransferase, glycine cleavage system T protein
[Dinoroseobacter shibae DFL 12]
Length = 361
Score = 35.6 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 79/265 (29%), Gaps = 45/265 (16%)
Query: 7 SNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
S+ +++ G L+ ++ + +L AR + + T G I ++++ ++
Sbjct: 51 SHMCQMEITGDDPAAALERLVPGGITSLAPGQARYTQLTTGAGGIYDDLIVTRDPGGLYV 110
Query: 67 L------EIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSF----- 115
+ + D + + + + +I +Q L + F
Sbjct: 111 VANASMADQDVGLLRAGLPDCTLRVIEDHALIAVQGPAAAALVAGLVPAAEDLRFMQSAQ 170
Query: 116 -----IDERFSIADVLL----------------HRTWGHNEKIASDIKTYHELRINHGIV 154
D R S R + + + LR+ G+
Sbjct: 171 AAWDGQDLRLSRLGYTGEDGFEISLPATAAEAFARALIAGGAMPAGLGARDTLRMEAGLP 230
Query: 155 DPNTDFLPSTIFPHDALMDLLNGISLTK-----GCYIGQEVVSRIQHRNIIRKRPMIITG 209
D T P +A + G S+ K G + G + R R + +
Sbjct: 231 LYGQDIDQGTS-PPEAGL----GFSIPKRRRAEGGFPGAARILGELADGPAR-RLVGLRP 284
Query: 210 TDDLPP-SGSPILT-DDIEIGTLGV 232
P +G I D +GT+
Sbjct: 285 EGRAPVRAGVEITAPDGTPLGTVTS 309
>gi|311112293|ref|YP_003983515.1| dihydrolipoyllysine-residue acetyltransferase [Rothia dentocariosa
ATCC 17931]
gi|310943787|gb|ADP40081.1| dihydrolipoyllysine-residue acetyltransferase [Rothia dentocariosa
ATCC 17931]
Length = 496
Score = 35.6 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 6/119 (5%)
Query: 58 SKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVIIEIQPINGVVLSWNQE------HTFS 111
+ +++D S+ I +L + V + + + W E T++
Sbjct: 290 FSAPHMSIFVDVDASRTMEFIKRLKKSRHFEGVKVTPLLVLAAAVIWAAERNPQVNATWT 349
Query: 112 NSSFIDERFSIADVLLHRTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDA 170
+S +RF + G D + + + + T P +
Sbjct: 350 DSEIQIKRFMNLGIAAATPRGLMVPNIKDAQELSLRELAIALNNLTTRAREGKTQPAEM 408
>gi|221504712|gb|EEE30377.1| aminomethyltransferase, putative [Toxoplasma gondii VEG]
Length = 1475
Score = 35.6 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61
+ G+ + L +++ D+ + A+ + +L +G +L ++K+
Sbjct: 1017 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1070
>gi|195565049|ref|XP_002106119.1| GD16688 [Drosophila simulans]
gi|194203490|gb|EDX17066.1| GD16688 [Drosophila simulans]
Length = 938
Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650
>gi|28571104|ref|NP_572162.2| CG3626 [Drosophila melanogaster]
gi|28381559|gb|AAF45943.3| CG3626 [Drosophila melanogaster]
Length = 939
Score = 35.6 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 571 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 629
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 630 RSMCWIRKHMPNHLRAKVNVAD 651
>gi|195340835|ref|XP_002037018.1| GM12342 [Drosophila sechellia]
gi|194131134|gb|EDW53177.1| GM12342 [Drosophila sechellia]
Length = 905
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650
>gi|237839667|ref|XP_002369131.1| glycine cleavage T-protein domain containing protein [Toxoplasma
gondii ME49]
gi|211966795|gb|EEB01991.1| glycine cleavage T-protein domain containing protein [Toxoplasma
gondii ME49]
Length = 1536
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 9 QSFIKVCGKSAIPFLQAIITADVLT-LPYKIARGSAILTPQGKILLYFLISKIE 61
+ G+ + L +++ D+ + A+ + +L +G +L ++K+
Sbjct: 1013 RRVWHFRGRDRLSVLDMLLSCDLERGMRVGDAQYAVLLDSRGLVLDDCFVAKLS 1066
>gi|194888194|ref|XP_001976874.1| GG18704 [Drosophila erecta]
gi|190648523|gb|EDV45801.1| GG18704 [Drosophila erecta]
Length = 938
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 570 GNEVVDLLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQQT 628
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 629 RSMCWIRKHMPNHLRAKVNVAD 650
>gi|56709092|ref|YP_165137.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
gi|56680777|gb|AAV97442.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
Length = 803
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 13 KVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFI 66
++ G A L + + + +LT +G+ I +I E+ +
Sbjct: 492 EITGTDAGKLLNRLSANRIPH-KDGRMSLNHLLTEKGRFETEITIWRINENRYF 544
>gi|85703172|ref|ZP_01034276.1| aminomethyl transferase family protein [Roseovarius sp. 217]
gi|85672100|gb|EAQ26957.1| aminomethyl transferase family protein [Roseovarius sp. 217]
Length = 802
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
V G +A +L I+ + + +L+P+G++ F +S + E++F L
Sbjct: 492 VSGPNARSWLDRIMAGRIPK--PGRLSLTPMLSPKGRLWGDFTLSCLNEESFQL 543
>gi|126740278|ref|ZP_01755967.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
gi|126718733|gb|EBA15446.1| aminomethyl transferase family protein [Roseobacter sp. SK209-2-6]
Length = 381
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 29/56 (51%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ V G+ A + + T +V + + ++IL QGK + +I ++ +++++
Sbjct: 62 VHVMGEHAAQVIDRVTTRNVEKIMPGRSTYASILNDQGKFVDDCIIYRLSVNSWMV 117
>gi|2921867|gb|AAC04876.1| glycine cleavage system T-protein [Drosophila heteroneura]
Length = 148
Score = 35.6 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 14 VCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRS 72
V G A L++I TAD+L + + QG IL +++K+ + + + +
Sbjct: 90 VRGNDAAACLESISTADILGMLPGAGSLTVFTNEQGCILDDLIVNKVSDKELYVVSNAA 148
>gi|56695457|ref|YP_165805.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
gi|56677194|gb|AAV93860.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
Length = 811
Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEE 62
+ ++ + +V G A+ FL + + + L G+ F ++++ E
Sbjct: 484 LIDFTSFAKWEVSGAGAMAFLDRALANAMPK-RDGRVTLAHALDENGRFCAEFTVARLAE 542
Query: 63 DTFILEIDRSKRDSLIDKLLFYKLR 87
D F + + + D +L +LR
Sbjct: 543 DRFYI-CGPAFSEVHDDHVLRSRLR 566
>gi|322815453|gb|EFZ24106.1| hypothetical protein TCSYLVIO_9775 [Trypanosoma cruzi]
Length = 730
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 38/177 (21%)
Query: 33 TLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVII 92
+ SA +P G++L L + ++L+++ + + RS++
Sbjct: 51 KMKKNETMVSACWSPSGRLLAIGL---QCGELYLLDVESGDL------IRRFVPRSDIAF 101
Query: 93 EIQPINGVVLSW--------------------NQEHTFSNSSFIDERFSIADVLLHRTWG 132
I+ + LS + S+ ++ TW
Sbjct: 102 AIKDADAKTLSGIIDTSAGNEINNNEDNDGIDGDKEDDPLRQPPILPISVDGAIVACTWA 161
Query: 133 HNEKIASDIKTYHEL------RINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKG 183
S + +++EL ++ I + + P L+D GIS G
Sbjct: 162 SVAPSTSALHSHNELCLPLSTAVSSPIFE---ELEREDDIPVMLLLDQRGGISFLPG 215
>gi|194767822|ref|XP_001966013.1| GF19457 [Drosophila ananassae]
gi|190622898|gb|EDV38422.1| GF19457 [Drosophila ananassae]
Length = 934
Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 16 GKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRD 75
G + LQ + + DV + + + P G ++++ E +++ ++
Sbjct: 568 GNEVVELLQYLCSNDVD-VAVGSIIHTGMQNPNGGYENDCSLARLSEKHYMMIAPTIQQT 626
Query: 76 SLIDKLLFYK---LRSNVIIEI 94
+ + + LR+ V +
Sbjct: 627 RSMCWIRKHMPAHLRAKVNVAD 648
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 12/121 (9%)
Query: 85 KLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLLHRTWGHNEKIASDIKTY 144
LR ++ + ++ F R A V + G+++ T+
Sbjct: 115 VLRIKAELDRSAPDKIIWFLAPTVALCGQQFDVIRLQAASVPMKLITGNDQVDTWSADTW 174
Query: 145 HELRINHGIVDPNTDFLPSTIFPHDA------LMDLLNGISLTKGCYIGQEVVSRIQHRN 198
I+D + + DA +D L+ I +G + G ++++ HRN
Sbjct: 175 DT------ILDGVRVVVSTYQVLLDALCHAFINIDRLSLIIFDEGKHPGSKIMTDFYHRN 228
Query: 199 I 199
Sbjct: 229 K 229
>gi|115523615|ref|YP_780526.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisA53]
gi|115517562|gb|ABJ05546.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisA53]
Length = 383
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 17 KSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDS 76
A L+ ++ D+ LP R + G IL ++S D L ++ + +++
Sbjct: 76 ADAAAALERLLPQDIAALPLHRQRYAQFTNDSGGILDDLMVSNFG-DHLFLVVNAACKEA 134
Query: 77 LIDKLLFY 84
L +
Sbjct: 135 DEAHLRAH 142
>gi|145612761|ref|XP_001412358.1| hypothetical protein MGG_12421 [Magnaporthe oryzae 70-15]
gi|145019891|gb|EDK04119.1| hypothetical protein MGG_12421 [Magnaporthe oryzae 70-15]
Length = 624
Score = 35.2 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 147 LRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRK-RPM 205
LR+ G D P +A + + L KG ++G E V R+ +K RP+
Sbjct: 472 LRMEAGFRTYGVDVTTEH-GPFEAGLGA--AVDLGKGGFVGCEAVRRLASEKPAKKLRPI 528
Query: 206 IITGTDDLPPSGSPILTDDIEIGTLGVVV----GKKALAIARIDKVDHAIKKGMALTVHG 261
+ + P+ +G + V K LA A + + G+ + G
Sbjct: 529 AVDDGRSVVMGKEPVFVSGKAVGYVSSAVFGYTIGKPLAFAWL-PAELGPGAGVEIEYFG 587
Query: 262 VRVKASF 268
R+KA+
Sbjct: 588 RRIKATV 594
>gi|117929054|ref|YP_873605.1| aminomethyltransferase [Acidothermus cellulolyticus 11B]
gi|117649517|gb|ABK53619.1| aminomethyltransferase [Acidothermus cellulolyticus 11B]
Length = 386
Score = 35.2 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 82/286 (28%), Gaps = 55/286 (19%)
Query: 32 LTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLFYKLRSNVI 91
TL A+ + + G ++ ++ +I F++ + + ++D+L NV
Sbjct: 97 DTLAVGRAKYTMMCDENGGVVDDLVVYRISPTDFLVVANAANTAVVVDELRRRCAEFNVE 156
Query: 92 IEIQPINGVVLSWNQEHT-FSNSSFIDE--------RFSIADVLLHRTW----------- 131
+ + +++ +DE R + ADV R
Sbjct: 157 VRDETTRWCLVALQGPKAVDILRGLLDEQVLELRYYRVTEADVCGRRALVARTGYTGEDG 216
Query: 132 --------------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDAL 171
+ + LR+ G+ + P A
Sbjct: 217 FEIFLDDDPVPLWRAILERGQDAGVLPCGLAARDSLRLEAGMPLYGRELSRDRT-PFHAG 275
Query: 172 MDLLNGISLTKGCYIGQEVVSRIQHRNIIR-KRPMIITGTDDLPPSGSPILTDDI---EI 227
+ + ++L K ++G+ + +++ + + G P + D+ I
Sbjct: 276 LGRV--VALDKPNFVGK--AALMRYAAEPPDETLAGLAGVGRRAPRHGDAVYDERGLVRI 331
Query: 228 GTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKAS 267
G + A+A R D + + V +
Sbjct: 332 GEVTSGAPSPTLGYAIAMAYLRRDYAAPNTPALVDVRGKYEAVTVT 377
>gi|254441181|ref|ZP_05054674.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus
307]
gi|198251259|gb|EDY75574.1| sarcosine oxidase, alpha subunit family [Octadecabacter antarcticus
307]
Length = 973
Score = 35.2 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%)
Query: 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEED 63
+S I + G A FL + TL R +L G ++ + + +
Sbjct: 638 CDVSTLGKIDIQGPDAAAFLDFVYCNTFSTLRENRVRYGLMLREDGHVMDDGTTACLGPN 697
Query: 64 TFILEIDRSKRDSLIDKL 81
+++ + ++ L
Sbjct: 698 HYVMTTTTAAAGQVMKHL 715
>gi|114769451|ref|ZP_01447077.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
gi|114550368|gb|EAU53249.1| aminomethyl transferase family protein [alpha proteobacterium
HTCC2255]
Length = 381
Score = 35.2 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFIL 67
+ + G A + + T +V + +AIL GK + +I + + +++
Sbjct: 62 VHLVGPDAAYVIDRVTTRNVDKIGVGRCTYAAILNDDGKFIDDCVIYHLNVNQWMV 117
>gi|297197994|ref|ZP_06915391.1| FAD dependent oxidoreductase [Streptomyces sviceus ATCC 29083]
gi|297146958|gb|EDY59037.2| FAD dependent oxidoreductase [Streptomyces sviceus ATCC 29083]
Length = 702
Score = 35.2 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 12 IKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTF 65
++V G+ A FL+ + T V + +L G I ++++ D F
Sbjct: 500 LEVSGRGAAAFLERLCTGKVAK-SVGSVTYTLLLDHDGGIRSDITVARLAPDVF 552
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.159 0.478
Lambda K H
0.267 0.0486 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,449,742,666
Number of Sequences: 14124377
Number of extensions: 252701966
Number of successful extensions: 566365
Number of sequences better than 10.0: 3923
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 1157
Number of HSP's that attempted gapping in prelim test: 555151
Number of HSP's gapped (non-prelim): 7271
length of query: 273
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 136
effective length of database: 2,907,753,981
effective search space: 395454541416
effective search space used: 395454541416
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 81 (35.6 bits)